Query psy11600
Match_columns 277
No_of_seqs 180 out of 1690
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 22:49:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11600.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11600hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3inp_A D-ribulose-phosphate 3- 100.0 2.4E-52 8.4E-57 373.6 17.9 207 6-255 28-242 (246)
2 3ovp_A Ribulose-phosphate 3-ep 100.0 8.8E-51 3E-55 360.3 20.4 208 4-254 3-215 (228)
3 3ctl_A D-allulose-6-phosphate 100.0 1.9E-50 6.4E-55 358.9 20.5 203 7-254 2-215 (231)
4 1tqx_A D-ribulose-5-phosphate 100.0 3.7E-50 1.3E-54 356.0 18.5 210 1-254 1-219 (227)
5 3cu2_A Ribulose-5-phosphate 3- 100.0 3.2E-46 1.1E-50 332.6 15.9 203 7-255 15-235 (237)
6 1tqj_A Ribulose-phosphate 3-ep 100.0 5.8E-42 2E-46 303.9 19.1 206 6-255 5-220 (230)
7 1h1y_A D-ribulose-5-phosphate 100.0 1.3E-37 4.5E-42 274.9 22.6 207 4-254 5-219 (228)
8 1rpx_A Protein (ribulose-phosp 100.0 1.1E-31 3.9E-36 236.4 20.0 210 2-255 7-226 (230)
9 2fli_A Ribulose-phosphate 3-ep 100.0 5.5E-31 1.9E-35 229.8 19.9 205 6-254 4-216 (220)
10 3inp_A D-ribulose-phosphate 3- 100.0 2.9E-28 9.8E-33 217.8 12.3 165 65-277 28-214 (246)
11 3ctl_A D-allulose-6-phosphate 99.9 2.5E-27 8.6E-32 210.1 11.6 161 67-276 3-185 (231)
12 3ovp_A Ribulose-phosphate 3-ep 99.9 9.7E-27 3.3E-31 205.9 13.8 164 65-276 5-187 (228)
13 2czd_A Orotidine 5'-phosphate 99.9 1.3E-27 4.3E-32 208.1 4.5 192 10-254 1-203 (208)
14 1tqx_A D-ribulose-5-phosphate 99.9 4.8E-26 1.6E-30 201.3 12.7 165 65-276 6-191 (227)
15 3cu2_A Ribulose-5-phosphate 3- 99.9 6.5E-25 2.2E-29 195.2 6.1 162 67-276 16-205 (237)
16 1q6o_A Humps, 3-keto-L-gulonat 99.9 1.6E-24 5.5E-29 189.4 5.1 192 9-254 4-209 (216)
17 1eix_A Orotidine 5'-monophosph 99.9 1.6E-24 5.4E-29 193.5 3.9 197 8-255 14-240 (245)
18 3jr2_A Hexulose-6-phosphate sy 99.9 8.5E-24 2.9E-28 185.2 6.5 194 11-254 9-211 (218)
19 2yyu_A Orotidine 5'-phosphate 99.9 9.3E-24 3.2E-28 188.5 5.9 196 9-255 5-234 (246)
20 3f4w_A Putative hexulose 6 pho 99.9 1.9E-22 6.5E-27 174.7 12.0 193 12-254 4-205 (211)
21 1dbt_A Orotidine 5'-phosphate 99.9 1.5E-22 5E-27 180.0 5.1 194 10-254 5-232 (239)
22 1geq_A Tryptophan synthase alp 99.9 2E-21 6.7E-26 172.4 11.5 188 6-242 5-225 (248)
23 3ajx_A 3-hexulose-6-phosphate 99.8 3.5E-21 1.2E-25 166.3 10.1 194 10-255 2-205 (207)
24 1tqj_A Ribulose-phosphate 3-ep 99.8 8.7E-21 3E-25 167.7 12.2 163 66-276 6-191 (230)
25 1qop_A Tryptophan synthase alp 99.8 5.8E-20 2E-24 165.8 12.6 190 6-242 17-239 (268)
26 1h1y_A D-ribulose-5-phosphate 99.8 8.4E-19 2.9E-23 154.4 13.4 168 64-276 6-191 (228)
27 3exr_A RMPD (hexulose-6-phosph 99.8 2.9E-19 1E-23 157.1 8.9 196 10-254 7-214 (221)
28 1rd5_A Tryptophan synthase alp 99.7 3.4E-17 1.1E-21 146.8 14.2 189 6-242 18-235 (262)
29 3vnd_A TSA, tryptophan synthas 99.7 5.2E-16 1.8E-20 140.0 13.2 190 6-241 18-239 (267)
30 1vzw_A Phosphoribosyl isomeras 99.6 1.1E-15 3.6E-20 135.1 9.6 173 19-242 33-227 (244)
31 2fli_A Ribulose-phosphate 3-ep 99.6 4.5E-15 1.5E-19 128.8 13.2 163 66-276 5-188 (220)
32 1rpx_A Protein (ribulose-phosp 99.6 3.8E-14 1.3E-18 124.2 14.7 166 65-276 11-197 (230)
33 2y88_A Phosphoribosyl isomeras 99.6 9.5E-15 3.2E-19 128.7 10.7 181 19-250 32-239 (244)
34 2czd_A Orotidine 5'-phosphate 99.5 8.5E-15 2.9E-19 127.0 7.5 149 73-276 8-175 (208)
35 3m47_A Orotidine 5'-phosphate 99.5 5.4E-14 1.8E-18 124.1 6.2 194 10-255 14-221 (228)
36 1yad_A Regulatory protein TENI 99.4 3.2E-12 1.1E-16 111.3 13.0 181 6-254 20-210 (221)
37 1eix_A Orotidine 5'-monophosph 99.4 6E-13 2E-17 118.4 7.9 161 71-276 21-211 (245)
38 2v82_A 2-dehydro-3-deoxy-6-pho 99.4 1.6E-11 5.4E-16 106.1 15.6 180 4-254 5-198 (212)
39 2yyu_A Orotidine 5'-phosphate 99.3 2.5E-12 8.4E-17 114.4 9.4 152 73-270 13-188 (246)
40 3jr2_A Hexulose-6-phosphate sy 99.3 3.3E-12 1.1E-16 111.3 9.9 159 71-276 13-184 (218)
41 1yxy_A Putative N-acetylmannos 99.3 1.9E-11 6.6E-16 107.0 14.0 180 19-255 37-231 (234)
42 1dbt_A Orotidine 5'-phosphate 99.3 3.4E-12 1.1E-16 113.0 7.2 155 73-272 12-189 (239)
43 1h5y_A HISF; histidine biosynt 99.3 6.2E-11 2.1E-15 103.7 13.7 204 2-255 1-247 (253)
44 2tps_A Protein (thiamin phosph 99.2 8.1E-11 2.8E-15 102.2 12.3 191 6-254 21-218 (227)
45 1y0e_A Putative N-acetylmannos 99.2 3.5E-10 1.2E-14 98.1 15.7 180 16-254 21-219 (223)
46 1xi3_A Thiamine phosphate pyro 99.2 1.4E-10 4.7E-15 99.6 12.7 185 6-254 18-208 (215)
47 1q6o_A Humps, 3-keto-L-gulonat 99.2 2.7E-11 9.2E-16 105.3 7.7 154 73-276 12-181 (216)
48 1qop_A Tryptophan synthase alp 99.2 7E-10 2.4E-14 99.7 17.2 171 55-275 8-223 (268)
49 1thf_D HISF protein; thermophI 99.1 1.8E-10 6.1E-15 101.7 10.7 187 19-255 31-244 (253)
50 3f4w_A Putative hexulose 6 pho 99.1 8.1E-10 2.8E-14 95.0 13.7 157 73-277 9-178 (211)
51 1geq_A Tryptophan synthase alp 99.1 6.6E-10 2.3E-14 97.9 13.0 163 64-276 4-210 (248)
52 3exr_A RMPD (hexulose-6-phosph 99.1 5E-10 1.7E-14 98.1 9.9 159 71-276 12-186 (221)
53 3ajx_A 3-hexulose-6-phosphate 99.0 1.1E-09 3.6E-14 94.0 10.1 154 74-276 10-176 (207)
54 3vnd_A TSA, tryptophan synthas 98.9 4.4E-08 1.5E-12 88.1 17.7 173 54-273 8-222 (267)
55 1rd5_A Tryptophan synthase alp 98.9 5E-08 1.7E-12 86.9 16.1 175 54-276 8-220 (262)
56 3iwp_A Copper homeostasis prot 98.7 5.2E-07 1.8E-11 81.5 16.8 167 19-235 48-233 (287)
57 1wa3_A 2-keto-3-deoxy-6-phosph 98.7 3.4E-07 1.2E-11 78.1 14.8 179 6-254 10-198 (205)
58 1vzw_A Phosphoribosyl isomeras 98.6 2.4E-08 8.4E-13 87.6 5.8 182 37-277 10-210 (244)
59 2zbt_A Pyridoxal biosynthesis 98.6 2.4E-07 8.3E-12 83.9 10.6 205 21-254 31-256 (297)
60 2ekc_A AQ_1548, tryptophan syn 98.6 9E-07 3.1E-11 79.1 13.6 200 6-253 17-253 (262)
61 3nav_A Tryptophan synthase alp 98.5 2.9E-06 9.8E-11 76.4 14.3 185 6-236 20-233 (271)
62 3ru6_A Orotidine 5'-phosphate 98.5 1E-06 3.5E-11 80.5 11.4 94 9-110 25-123 (303)
63 3nl6_A Thiamine biosynthetic b 98.4 2.3E-06 8E-11 84.0 13.6 192 7-255 14-228 (540)
64 2y88_A Phosphoribosyl isomeras 98.3 6E-07 2.1E-11 78.5 6.8 160 73-276 30-212 (244)
65 3m47_A Orotidine 5'-phosphate 98.3 5.5E-07 1.9E-11 79.1 6.0 69 71-139 19-100 (228)
66 1yxy_A Putative N-acetylmannos 98.2 4.2E-05 1.4E-09 66.4 14.4 169 53-277 9-206 (234)
67 1yad_A Regulatory protein TENI 98.1 6.8E-05 2.3E-09 64.6 14.9 142 78-276 33-182 (221)
68 3tr2_A Orotidine 5'-phosphate 98.1 1.6E-05 5.5E-10 70.2 11.1 91 10-110 10-106 (239)
69 1vqt_A Orotidine 5'-phosphate 98.1 2.9E-06 1E-10 73.6 4.7 76 15-97 16-95 (213)
70 2yw3_A 4-hydroxy-2-oxoglutarat 98.0 0.0004 1.4E-08 59.7 18.1 178 7-255 14-200 (207)
71 1y0e_A Putative N-acetylmannos 98.0 7.6E-05 2.6E-09 64.1 13.3 159 65-276 7-194 (223)
72 1wa3_A 2-keto-3-deoxy-6-phosph 98.0 1.9E-05 6.3E-10 67.2 8.8 82 67-154 12-103 (205)
73 2ekc_A AQ_1548, tryptophan syn 97.9 0.0013 4.5E-08 58.4 19.2 174 55-276 8-225 (262)
74 1vhc_A Putative KHG/KDPG aldol 97.9 0.0017 5.9E-08 56.5 19.3 167 7-242 18-190 (224)
75 1thf_D HISF protein; thermophI 97.9 8.6E-05 3E-09 64.9 11.1 87 36-139 9-105 (253)
76 1wbh_A KHG/KDPG aldolase; lyas 97.9 0.00088 3E-08 57.9 17.2 163 7-236 17-181 (214)
77 3o63_A Probable thiamine-phosp 97.8 0.00023 8E-09 62.8 13.0 182 18-255 43-238 (243)
78 3iwp_A Copper homeostasis prot 97.8 0.00044 1.5E-08 62.4 14.7 154 73-276 46-227 (287)
79 3qja_A IGPS, indole-3-glycerol 97.8 0.00025 8.7E-09 63.6 12.9 173 75-255 73-261 (272)
80 1mxs_A KDPG aldolase; 2-keto-3 97.8 0.002 6.9E-08 56.1 17.9 166 8-242 28-199 (225)
81 3nav_A Tryptophan synthase alp 97.7 0.0017 5.7E-08 58.3 17.1 172 54-273 10-224 (271)
82 3ldv_A Orotidine 5'-phosphate 97.7 8.5E-05 2.9E-09 66.2 8.1 90 10-111 29-126 (255)
83 1h5y_A HISF; histidine biosynt 97.7 0.00068 2.3E-08 58.5 13.0 86 36-139 10-108 (253)
84 1xi3_A Thiamine phosphate pyro 97.6 0.00055 1.9E-08 58.0 12.0 148 75-276 27-180 (215)
85 2gjl_A Hypothetical protein PA 97.6 0.00053 1.8E-08 62.6 11.3 133 53-236 57-197 (328)
86 2h6r_A Triosephosphate isomera 97.5 0.0002 6.8E-09 62.1 7.9 162 42-253 36-216 (219)
87 3tfx_A Orotidine 5'-phosphate 97.5 0.0012 4.3E-08 58.7 12.9 91 10-110 6-103 (259)
88 4e38_A Keto-hydroxyglutarate-a 97.4 0.011 3.7E-07 51.8 17.7 163 7-236 35-198 (232)
89 2tps_A Protein (thiamin phosph 97.4 0.00093 3.2E-08 57.2 10.1 148 76-276 33-190 (227)
90 3bo9_A Putative nitroalkan dio 97.3 0.0031 1.1E-07 57.7 13.5 130 53-236 67-201 (326)
91 1ka9_F Imidazole glycerol phos 97.3 0.0018 6.3E-08 56.3 11.5 179 36-236 10-221 (252)
92 2zbt_A Pyridoxal biosynthesis 97.3 0.00039 1.3E-08 62.6 6.7 73 10-96 80-154 (297)
93 3ve9_A Orotidine-5'-phosphate 97.3 0.0004 1.4E-08 60.3 6.5 176 12-254 5-198 (215)
94 3lab_A Putative KDPG (2-keto-3 97.1 0.02 7E-07 49.5 15.9 160 6-236 13-183 (217)
95 3tsm_A IGPS, indole-3-glycerol 97.1 0.0064 2.2E-07 54.5 12.7 172 75-254 80-267 (272)
96 1ep3_A Dihydroorotate dehydrog 97.1 0.0025 8.6E-08 57.2 9.9 166 56-251 90-285 (311)
97 1ujp_A Tryptophan synthase alp 97.0 0.016 5.6E-07 51.7 14.7 181 6-236 16-225 (271)
98 2v82_A 2-dehydro-3-deoxy-6-pho 97.0 0.0062 2.1E-07 51.7 11.4 70 63-134 5-84 (212)
99 3igs_A N-acetylmannosamine-6-p 97.0 0.015 5.2E-07 50.7 13.5 163 76-253 38-224 (232)
100 1ep3_A Dihydroorotate dehydrog 96.9 0.0042 1.4E-07 55.7 10.1 129 6-136 99-269 (311)
101 4gj1_A 1-(5-phosphoribosyl)-5- 96.9 0.016 5.5E-07 50.8 13.0 175 37-232 8-214 (243)
102 1vc4_A Indole-3-glycerol phosp 96.8 0.013 4.4E-07 51.8 11.9 171 74-253 65-253 (254)
103 3q58_A N-acetylmannosamine-6-p 96.8 0.03 1E-06 48.7 14.0 163 76-253 38-224 (229)
104 3tha_A Tryptophan synthase alp 96.7 0.021 7.1E-07 50.6 12.7 170 64-236 13-223 (252)
105 2z6i_A Trans-2-enoyl-ACP reduc 96.7 0.013 4.6E-07 53.4 11.4 43 53-96 53-97 (332)
106 1nvm_A HOA, 4-hydroxy-2-oxoval 96.6 0.058 2E-06 49.6 15.4 173 17-236 29-222 (345)
107 3tdn_A FLR symmetric alpha-bet 96.5 0.0085 2.9E-07 52.2 8.3 73 19-96 36-108 (247)
108 3khj_A Inosine-5-monophosphate 96.5 0.053 1.8E-06 50.3 14.0 103 26-139 65-175 (361)
109 3bw2_A 2-nitropropane dioxygen 96.4 0.055 1.9E-06 50.0 14.0 108 120-236 112-233 (369)
110 4adt_A Pyridoxine biosynthetic 96.4 0.17 5.8E-06 45.7 16.6 210 15-254 26-256 (297)
111 2e6f_A Dihydroorotate dehydrog 96.4 0.03 1E-06 50.4 11.6 171 55-251 82-289 (314)
112 4dbe_A Orotidine 5'-phosphate 96.3 0.041 1.4E-06 47.7 11.3 185 10-254 5-205 (222)
113 1ujp_A Tryptophan synthase alp 96.2 0.25 8.7E-06 43.9 16.6 169 55-275 7-220 (271)
114 1vqt_A Orotidine 5'-phosphate 96.2 0.019 6.6E-07 49.4 8.7 60 77-139 25-94 (213)
115 1nsj_A PRAI, phosphoribosyl an 96.0 0.066 2.3E-06 45.8 11.4 167 78-254 13-200 (205)
116 1v5x_A PRA isomerase, phosphor 95.8 0.17 5.7E-06 43.2 12.7 165 78-254 12-194 (203)
117 2w6r_A Imidazole glycerol phos 95.8 0.093 3.2E-06 45.7 11.4 164 74-242 30-234 (266)
118 2agk_A 1-(5-phosphoribosyl)-5- 95.7 0.086 2.9E-06 46.6 11.2 181 37-232 7-226 (260)
119 1xm3_A Thiazole biosynthesis p 95.7 0.09 3.1E-06 46.5 11.3 172 75-253 24-224 (264)
120 3eww_A Ompdecase, orotidine-5' 95.7 0.16 5.5E-06 45.0 12.9 94 10-111 33-137 (260)
121 3ru6_A Orotidine 5'-phosphate 95.6 0.15 5E-06 46.3 12.2 74 66-139 26-112 (303)
122 2nv1_A Pyridoxal biosynthesis 95.5 0.019 6.4E-07 51.8 5.8 63 73-135 27-105 (305)
123 1jub_A Dihydroorotate dehydrog 95.4 0.19 6.6E-06 44.9 12.4 162 64-251 93-287 (311)
124 4aaj_A N-(5'-phosphoribosyl)an 95.3 0.74 2.5E-05 39.9 15.4 148 75-235 30-197 (228)
125 3nl6_A Thiamine biosynthetic b 95.3 0.37 1.2E-05 47.1 14.7 151 76-276 27-191 (540)
126 3b0p_A TRNA-dihydrouridine syn 95.1 0.16 5.6E-06 46.6 11.3 126 7-137 59-225 (350)
127 1jub_A Dihydroorotate dehydrog 94.8 0.36 1.2E-05 43.1 12.4 124 8-137 96-271 (311)
128 2yw3_A 4-hydroxy-2-oxoglutarat 94.7 0.33 1.1E-05 41.2 11.4 101 21-136 73-178 (207)
129 2w6r_A Imidazole glycerol phos 94.5 0.3 1E-05 42.4 10.9 115 19-138 31-177 (266)
130 1f76_A Dihydroorotate dehydrog 94.4 0.39 1.3E-05 43.5 11.8 166 53-250 122-333 (336)
131 2yzr_A Pyridoxal biosynthesis 94.4 1.7 5.8E-05 39.7 15.7 224 21-254 27-289 (330)
132 3gr7_A NADPH dehydrogenase; fl 94.3 0.27 9.3E-06 45.0 10.6 118 19-137 145-307 (340)
133 3tsm_A IGPS, indole-3-glycerol 94.3 0.7 2.4E-05 41.1 12.9 122 8-138 68-197 (272)
134 3iix_A Biotin synthetase, puta 94.3 0.36 1.2E-05 43.4 11.2 88 15-110 84-173 (348)
135 1ydn_A Hydroxymethylglutaryl-C 94.2 0.75 2.6E-05 40.9 13.1 68 21-94 29-99 (295)
136 2e6f_A Dihydroorotate dehydrog 94.2 0.17 5.9E-06 45.3 8.7 124 7-136 95-272 (314)
137 1qo2_A Molecule: N-((5-phospho 94.1 0.14 4.9E-06 44.0 7.9 174 36-232 6-209 (241)
138 1jcn_A Inosine monophosphate d 94.0 0.38 1.3E-05 46.3 11.3 112 19-137 255-387 (514)
139 1gte_A Dihydropyrimidine dehyd 93.9 0.54 1.8E-05 49.1 12.9 159 55-236 625-812 (1025)
140 1vyr_A Pentaerythritol tetrani 93.6 0.49 1.7E-05 43.7 10.8 119 19-137 162-323 (364)
141 3o07_A Pyridoxine biosynthesis 93.6 0.61 2.1E-05 41.8 10.9 203 21-254 21-247 (291)
142 2h6r_A Triosephosphate isomera 93.5 0.77 2.6E-05 39.2 11.3 106 123-276 75-189 (219)
143 2ftp_A Hydroxymethylglutaryl-C 93.4 1.8 6.3E-05 38.6 14.1 66 18-92 30-101 (302)
144 1ka9_F Imidazole glycerol phos 93.2 0.29 9.8E-06 42.1 8.1 115 19-138 32-173 (252)
145 2gou_A Oxidoreductase, FMN-bin 93.1 0.36 1.2E-05 44.6 9.1 117 19-136 162-321 (365)
146 1i4n_A Indole-3-glycerol phosp 93.1 0.75 2.6E-05 40.5 10.7 170 75-254 62-248 (251)
147 4fxs_A Inosine-5'-monophosphat 93.1 0.66 2.3E-05 44.7 11.3 69 19-93 231-299 (496)
148 3lab_A Putative KDPG (2-keto-3 93.0 0.69 2.4E-05 39.8 10.1 70 66-136 14-91 (217)
149 3o63_A Probable thiamine-phosp 92.9 2.6 8.8E-05 36.7 13.9 34 243-276 175-209 (243)
150 4ef8_A Dihydroorotate dehydrog 92.9 0.6 2E-05 43.1 10.2 214 10-251 49-322 (354)
151 1vc4_A Indole-3-glycerol phosp 92.7 0.38 1.3E-05 42.2 8.2 115 18-138 65-182 (254)
152 1wbh_A KHG/KDPG aldolase; lyas 92.7 1 3.5E-05 38.4 10.7 100 21-135 78-183 (214)
153 1qpo_A Quinolinate acid phosph 92.6 0.75 2.6E-05 41.2 10.1 27 210-236 239-265 (284)
154 2yci_X 5-methyltetrahydrofolat 92.5 2.9 0.0001 36.9 13.9 78 75-155 35-125 (271)
155 3rpd_A Methionine synthase (B1 92.4 1.4 4.7E-05 40.7 11.9 68 19-92 172-264 (357)
156 2r14_A Morphinone reductase; H 92.4 0.46 1.6E-05 44.1 8.8 119 19-137 167-328 (377)
157 3b0p_A TRNA-dihydrouridine syn 92.3 0.59 2E-05 42.8 9.4 76 64-139 57-166 (350)
158 3tr9_A Dihydropteroate synthas 92.3 2.5 8.7E-05 38.3 13.3 70 63-135 38-130 (314)
159 1ypf_A GMP reductase; GUAC, pu 92.2 1.5 5.2E-05 39.8 11.9 108 22-136 109-238 (336)
160 3ble_A Citramalate synthase fr 92.2 2 7E-05 39.0 12.8 64 23-95 46-117 (337)
161 1viz_A PCRB protein homolog; s 92.2 0.94 3.2E-05 39.5 10.0 172 69-254 10-229 (240)
162 1o4u_A Type II quinolic acid p 92.2 0.4 1.4E-05 43.0 7.8 27 210-236 238-264 (285)
163 3t7v_A Methylornithine synthas 92.2 0.98 3.4E-05 40.8 10.6 88 15-110 91-183 (350)
164 1mxs_A KDPG aldolase; 2-keto-3 92.1 0.49 1.7E-05 40.8 8.0 99 22-135 89-193 (225)
165 1z41_A YQJM, probable NADH-dep 92.1 0.78 2.7E-05 41.7 9.8 117 19-137 145-307 (338)
166 1p0k_A Isopentenyl-diphosphate 92.1 2.7 9.2E-05 38.1 13.5 83 54-136 106-208 (349)
167 1vhc_A Putative KHG/KDPG aldol 92.1 1 3.6E-05 38.7 10.1 100 21-135 79-184 (224)
168 1vhn_A Putative flavin oxidore 92.0 0.38 1.3E-05 43.4 7.5 126 7-138 60-214 (318)
169 3gnn_A Nicotinate-nucleotide p 91.8 0.66 2.2E-05 41.9 8.7 27 210-236 251-277 (298)
170 2b7n_A Probable nicotinate-nuc 91.6 0.23 7.9E-06 44.2 5.5 74 200-277 169-248 (273)
171 3g3d_A UMP synthase, uridine 5 91.5 0.38 1.3E-05 43.7 6.9 94 10-111 85-189 (312)
172 3ve9_A Orotidine-5'-phosphate 91.4 0.83 2.9E-05 39.1 8.6 64 74-139 11-85 (215)
173 3hgj_A Chromate reductase; TIM 91.4 0.85 2.9E-05 41.7 9.2 117 20-137 154-318 (349)
174 1qpo_A Quinolinate acid phosph 91.2 0.24 8.2E-06 44.4 5.2 73 201-276 183-259 (284)
175 3lmz_A Putative sugar isomeras 90.9 3.7 0.00013 34.8 12.5 52 4-59 16-67 (257)
176 1f76_A Dihydroorotate dehydrog 90.9 0.94 3.2E-05 40.9 9.0 125 7-137 135-318 (336)
177 1kbi_A Cytochrome B2, L-LCR; f 90.8 2.3 7.9E-05 41.0 12.1 119 14-136 256-431 (511)
178 3tqv_A Nicotinate-nucleotide p 90.8 0.76 2.6E-05 41.2 8.0 79 52-137 186-270 (287)
179 3igs_A N-acetylmannosamine-6-p 90.5 4.6 0.00016 34.7 12.7 107 17-136 35-155 (232)
180 3r2g_A Inosine 5'-monophosphat 90.4 1.5 5.1E-05 40.6 9.9 114 17-137 98-228 (361)
181 3kts_A Glycerol uptake operon 90.2 0.77 2.6E-05 38.8 7.2 116 12-136 35-178 (192)
182 3q58_A N-acetylmannosamine-6-p 90.1 3.6 0.00012 35.3 11.6 107 17-136 35-155 (229)
183 2nli_A Lactate oxidase; flavoe 90.1 3.4 0.00012 38.1 12.2 118 15-136 143-312 (368)
184 3qvq_A Phosphodiesterase OLEI0 90.0 2.9 0.0001 36.0 11.1 97 48-152 149-248 (252)
185 1rqb_A Transcarboxylase 5S sub 90.0 3 0.0001 40.6 12.1 114 22-137 51-195 (539)
186 2pz0_A Glycerophosphoryl diest 89.9 1.9 6.6E-05 37.2 9.8 86 48-136 150-238 (252)
187 1vrd_A Inosine-5'-monophosphat 89.8 3.1 0.00011 39.5 12.1 70 18-93 236-305 (494)
188 2qjg_A Putative aldolase MJ040 89.8 9 0.00031 33.0 15.8 53 201-254 192-255 (273)
189 3tr2_A Orotidine 5'-phosphate 89.7 0.46 1.6E-05 41.4 5.6 170 69-255 13-235 (239)
190 3qja_A IGPS, indole-3-glycerol 89.6 2.4 8.3E-05 37.5 10.4 122 9-138 62-190 (272)
191 3paj_A Nicotinate-nucleotide p 89.5 1.1 3.7E-05 40.9 8.1 78 52-136 219-302 (320)
192 3l0g_A Nicotinate-nucleotide p 89.5 1.1 3.6E-05 40.5 7.9 79 52-137 195-279 (300)
193 2otd_A Glycerophosphodiester p 89.5 1.7 5.7E-05 37.3 9.1 86 48-136 146-234 (247)
194 1pii_A N-(5'phosphoribosyl)ant 89.4 2.6 8.7E-05 40.2 11.0 143 80-235 268-422 (452)
195 2jbm_A Nicotinate-nucleotide p 89.2 0.55 1.9E-05 42.3 5.9 74 200-277 184-263 (299)
196 4e38_A Keto-hydroxyglutarate-a 89.2 4.6 0.00016 34.9 11.6 77 21-112 96-172 (232)
197 4fo4_A Inosine 5'-monophosphat 89.0 0.87 3E-05 42.2 7.2 69 19-93 108-176 (366)
198 1eep_A Inosine 5'-monophosphat 88.9 1.8 6.3E-05 40.2 9.4 111 19-136 153-284 (404)
199 3gka_A N-ethylmaleimide reduct 88.7 1.1 3.7E-05 41.4 7.7 115 20-137 163-316 (361)
200 3l5l_A Xenobiotic reductase A; 88.6 1.8 6.1E-05 39.8 9.1 118 20-137 160-325 (363)
201 4ab4_A Xenobiotic reductase B; 88.6 0.97 3.3E-05 41.8 7.2 114 20-137 155-308 (362)
202 3o1n_A 3-dehydroquinate dehydr 88.6 1.9 6.5E-05 38.3 8.9 142 5-152 39-210 (276)
203 3usb_A Inosine-5'-monophosphat 88.3 3 0.0001 40.2 10.8 69 19-93 256-324 (511)
204 2nzl_A Hydroxyacid oxidase 1; 88.3 5.2 0.00018 37.2 12.1 83 50-136 239-335 (392)
205 3oix_A Putative dihydroorotate 88.2 3.4 0.00012 37.8 10.6 216 10-251 50-320 (345)
206 3noy_A 4-hydroxy-3-methylbut-2 88.1 2.6 8.9E-05 38.9 9.6 98 64-165 29-143 (366)
207 1icp_A OPR1, 12-oxophytodienoa 88.1 0.9 3.1E-05 42.1 6.7 119 19-137 168-330 (376)
208 1ypx_A Putative vitamin-B12 in 88.0 2.1 7.2E-05 39.5 9.2 23 19-41 168-190 (375)
209 3tha_A Tryptophan synthase alp 88.0 4.3 0.00015 35.6 10.7 129 120-276 76-218 (252)
210 3ceu_A Thiamine phosphate pyro 87.9 2.2 7.6E-05 35.8 8.6 143 78-236 17-168 (210)
211 1x1o_A Nicotinate-nucleotide p 87.9 0.97 3.3E-05 40.5 6.5 78 52-136 183-267 (286)
212 2ftp_A Hydroxymethylglutaryl-C 87.7 0.61 2.1E-05 41.8 5.1 73 15-91 156-232 (302)
213 2jbm_A Nicotinate-nucleotide p 87.6 1.8 6.2E-05 38.9 8.2 29 208-236 240-268 (299)
214 2yr1_A 3-dehydroquinate dehydr 87.6 13 0.00043 32.4 13.5 143 5-152 19-190 (257)
215 3l0g_A Nicotinate-nucleotide p 87.5 1.5 5.2E-05 39.5 7.6 70 201-277 196-270 (300)
216 2o55_A Putative glycerophospho 87.4 2.9 9.8E-05 36.1 9.2 85 48-136 147-243 (258)
217 1gte_A Dihydropyrimidine dehyd 87.3 3.8 0.00013 42.7 11.5 126 7-138 636-817 (1025)
218 3aty_A Tcoye, prostaglandin F2 87.3 1.9 6.4E-05 40.0 8.3 87 50-137 229-336 (379)
219 3ks6_A Glycerophosphoryl diest 87.2 4.6 0.00016 34.8 10.4 85 48-136 138-231 (250)
220 3l12_A Putative glycerophospho 87.1 5.5 0.00019 35.4 11.2 100 48-155 186-309 (313)
221 4avf_A Inosine-5'-monophosphat 86.9 1.7 5.9E-05 41.6 8.0 70 18-93 228-297 (490)
222 1o4u_A Type II quinolic acid p 86.8 0.68 2.3E-05 41.5 4.8 74 200-277 180-259 (285)
223 4avf_A Inosine-5'-monophosphat 86.7 2.8 9.7E-05 40.1 9.5 117 18-139 166-300 (490)
224 3cny_A Inositol catabolism pro 86.7 14 0.00049 31.5 13.5 81 6-95 10-111 (301)
225 3g3d_A UMP synthase, uridine 5 86.3 8.8 0.0003 34.7 12.0 89 49-139 70-177 (312)
226 1vhn_A Putative flavin oxidore 86.2 7 0.00024 34.9 11.4 85 53-139 48-162 (318)
227 2qgq_A Protein TM_1862; alpha- 86.0 3.5 0.00012 36.5 9.2 91 14-110 32-134 (304)
228 1twd_A Copper homeostasis prot 85.8 18 0.0006 31.8 16.1 155 74-276 9-188 (256)
229 3sgz_A Hydroxyacid oxidase 2; 85.7 13 0.00044 34.1 13.0 117 15-136 132-300 (352)
230 1u1j_A 5-methyltetrahydroptero 85.7 10 0.00035 38.3 13.4 74 20-99 188-270 (765)
231 3tqv_A Nicotinate-nucleotide p 85.6 2.3 7.8E-05 38.1 7.6 69 202-277 188-261 (287)
232 1aj0_A DHPS, dihydropteroate s 85.4 14 0.00046 32.8 12.7 57 79-135 43-115 (282)
233 1qo2_A Molecule: N-((5-phospho 85.4 1.9 6.4E-05 36.8 6.8 114 19-138 31-165 (241)
234 3usb_A Inosine-5'-monophosphat 85.3 6.3 0.00021 37.9 11.2 62 75-138 194-276 (511)
235 3ldv_A Orotidine 5'-phosphate 84.9 1.5 5.1E-05 38.6 6.0 171 67-254 30-252 (255)
236 3gdm_A Orotidine 5'-phosphate 84.7 1.3 4.4E-05 39.3 5.6 92 10-110 31-135 (267)
237 2cw6_A Hydroxymethylglutaryl-C 84.7 7.3 0.00025 34.5 10.6 62 23-93 32-99 (298)
238 2hsa_B 12-oxophytodienoate red 84.5 3.3 0.00011 38.7 8.6 118 19-136 172-347 (402)
239 1i4n_A Indole-3-glycerol phosp 84.4 14 0.0005 32.1 12.2 121 9-138 51-179 (251)
240 2gjl_A Hypothetical protein PA 84.3 18 0.0006 32.2 13.1 105 17-136 82-200 (328)
241 2vp8_A Dihydropteroate synthas 84.3 9.9 0.00034 34.4 11.4 98 17-139 64-169 (318)
242 2nx9_A Oxaloacetate decarboxyl 84.1 4.3 0.00015 38.7 9.3 112 24-137 36-178 (464)
243 3vzx_A Heptaprenylglyceryl pho 84.0 6.5 0.00022 33.9 9.6 171 70-254 9-226 (228)
244 3p6l_A Sugar phosphate isomera 84.0 18 0.00062 30.4 14.5 89 4-94 8-111 (262)
245 1ps9_A 2,4-dienoyl-COA reducta 83.8 2.1 7.2E-05 42.3 7.3 117 19-137 142-310 (671)
246 3ih1_A Methylisocitrate lyase; 83.6 18 0.00063 32.4 12.8 118 16-138 102-244 (305)
247 1tv5_A Dhodehase, dihydroorota 83.5 9.7 0.00033 36.0 11.4 72 64-136 296-401 (443)
248 3r2g_A Inosine 5'-monophosphat 83.4 1.6 5.4E-05 40.4 5.7 111 120-236 102-224 (361)
249 3q94_A Fructose-bisphosphate a 83.4 5.2 0.00018 35.8 9.0 128 10-139 82-238 (288)
250 2qjg_A Putative aldolase MJ040 83.4 2.7 9.1E-05 36.5 7.0 111 21-136 102-236 (273)
251 3bg3_A Pyruvate carboxylase, m 83.2 15 0.00053 36.8 13.3 75 21-95 128-218 (718)
252 3rmj_A 2-isopropylmalate synth 83.2 8.4 0.00029 35.5 10.6 67 22-98 38-111 (370)
253 3gk0_A PNP synthase, pyridoxin 83.1 11 0.00037 33.5 10.7 82 51-139 37-124 (278)
254 3sr7_A Isopentenyl-diphosphate 82.8 4.1 0.00014 37.6 8.4 107 161-269 150-289 (365)
255 1ydo_A HMG-COA lyase; TIM-barr 82.8 19 0.00066 32.0 12.7 66 21-94 31-101 (307)
256 3gr7_A NADPH dehydrogenase; fl 82.8 6.6 0.00023 35.6 9.7 84 4-91 212-304 (340)
257 1r30_A Biotin synthase; SAM ra 82.8 20 0.00068 32.3 13.0 86 16-110 100-189 (369)
258 2dqw_A Dihydropteroate synthas 82.7 26 0.00089 31.3 13.4 78 74-155 52-146 (294)
259 2yci_X 5-methyltetrahydrofolat 82.6 11 0.00037 33.2 10.7 99 16-138 32-133 (271)
260 3khj_A Inosine-5-monophosphate 82.5 3.3 0.00011 38.1 7.5 67 21-94 107-173 (361)
261 1jvn_A Glutamine, bifunctional 82.4 4.2 0.00014 39.5 8.6 115 20-136 349-525 (555)
262 3eeg_A 2-isopropylmalate synth 82.2 15 0.00051 33.1 11.7 67 19-95 29-102 (325)
263 1p0k_A Isopentenyl-diphosphate 82.2 18 0.00062 32.5 12.4 113 21-136 130-279 (349)
264 4h3d_A 3-dehydroquinate dehydr 82.1 21 0.00072 31.0 12.4 143 5-152 19-190 (258)
265 3paj_A Nicotinate-nucleotide p 82.1 2.3 7.8E-05 38.7 6.2 70 201-277 220-294 (320)
266 3fst_A 5,10-methylenetetrahydr 82.1 28 0.00094 31.2 13.4 154 18-175 39-224 (304)
267 3kru_A NADH:flavin oxidoreduct 82.0 5.1 0.00017 36.5 8.6 115 20-136 145-306 (343)
268 2vef_A Dihydropteroate synthas 81.9 21 0.00072 32.1 12.6 58 78-135 37-110 (314)
269 1jvn_A Glutamine, bifunctional 81.8 4.1 0.00014 39.6 8.3 66 73-139 279-369 (555)
270 1zcc_A Glycerophosphodiester p 81.8 5.8 0.0002 34.0 8.5 86 48-136 133-222 (248)
271 3bo9_A Putative nitroalkan dio 81.7 22 0.00074 31.8 12.6 103 19-136 90-204 (326)
272 4af0_A Inosine-5'-monophosphat 81.7 2.5 8.6E-05 41.2 6.6 19 120-138 283-301 (556)
273 2b7n_A Probable nicotinate-nuc 81.6 3.6 0.00012 36.4 7.2 91 137-236 161-253 (273)
274 2nql_A AGR_PAT_674P, isomerase 81.4 11 0.00037 34.6 10.7 146 15-169 163-323 (388)
275 1eye_A DHPS 1, dihydropteroate 81.1 18 0.00063 32.0 11.7 96 17-138 28-132 (280)
276 2vp8_A Dihydropteroate synthas 81.0 18 0.00062 32.6 11.8 76 77-155 68-160 (318)
277 1twd_A Copper homeostasis prot 80.9 28 0.00096 30.5 17.0 162 23-235 13-193 (256)
278 2z6i_A Trans-2-enoyl-ACP reduc 80.9 16 0.00055 32.7 11.5 103 19-136 76-190 (332)
279 1jcn_A Inosine monophosphate d 80.9 11 0.00036 36.1 10.8 61 76-136 256-323 (514)
280 2qf7_A Pyruvate carboxylase pr 80.8 17 0.00059 38.5 13.2 72 22-93 577-664 (1165)
281 1ydn_A Hydroxymethylglutaryl-C 80.8 1.7 5.7E-05 38.6 4.8 73 15-91 152-228 (295)
282 1m5w_A Pyridoxal phosphate bio 80.8 26 0.00089 30.5 12.1 185 51-276 9-204 (243)
283 1eye_A DHPS 1, dihydropteroate 80.7 29 0.001 30.6 13.2 56 78-134 33-104 (280)
284 1vd6_A Glycerophosphoryl diest 80.7 5.2 0.00018 33.7 7.7 83 48-136 128-213 (224)
285 1t7l_A 5-methyltetrahydroptero 80.6 7.7 0.00026 39.3 10.0 76 19-98 590-676 (766)
286 1m3u_A 3-methyl-2-oxobutanoate 80.4 26 0.0009 30.8 12.3 111 24-138 30-182 (264)
287 3no3_A Glycerophosphodiester p 80.4 4 0.00014 34.9 6.9 97 48-153 136-235 (238)
288 3ch0_A Glycerophosphodiester p 80.3 6.3 0.00021 34.1 8.3 84 48-136 174-263 (272)
289 3bw2_A 2-nitropropane dioxygen 80.3 34 0.0012 31.0 14.3 104 19-136 110-236 (369)
290 3c2e_A Nicotinate-nucleotide p 80.1 1.2 4.2E-05 39.9 3.6 77 200-277 186-268 (294)
291 2rdx_A Mandelate racemase/muco 80.0 26 0.00089 31.8 12.8 145 15-169 144-302 (379)
292 3ewb_X 2-isopropylmalate synth 79.6 4.4 0.00015 36.1 7.1 73 15-91 147-226 (293)
293 1qwg_A PSL synthase;, (2R)-pho 79.5 19 0.00066 31.4 11.0 126 18-161 85-226 (251)
294 2pgw_A Muconate cycloisomerase 79.4 14 0.00048 33.7 10.7 146 15-168 146-305 (384)
295 1qap_A Quinolinic acid phospho 79.4 1.5 5E-05 39.5 3.9 71 200-276 196-270 (296)
296 1xg4_A Probable methylisocitra 79.0 18 0.00061 32.3 11.0 118 16-138 92-236 (295)
297 2f6u_A GGGPS, (S)-3-O-geranylg 78.8 25 0.00084 30.3 11.4 150 70-235 11-213 (234)
298 3tdn_A FLR symmetric alpha-bet 78.8 4.1 0.00014 34.8 6.5 173 75-251 36-244 (247)
299 3ues_A Alpha-1,3/4-fucosidase; 78.7 33 0.0011 32.7 13.4 139 75-262 63-205 (478)
300 1qap_A Quinolinic acid phospho 78.4 11 0.00036 33.8 9.3 78 52-136 196-279 (296)
301 2y5s_A DHPS, dihydropteroate s 78.2 17 0.00058 32.5 10.5 58 76-134 48-121 (294)
302 3tr9_A Dihydropteroate synthas 78.0 26 0.0009 31.6 11.8 93 21-139 52-157 (314)
303 3gnn_A Nicotinate-nucleotide p 77.9 1.6 5.4E-05 39.4 3.6 68 202-276 199-271 (298)
304 3n9r_A Fructose-bisphosphate a 77.7 7.7 0.00026 35.0 8.1 122 10-133 76-230 (307)
305 1xm3_A Thiazole biosynthesis p 77.7 12 0.00039 32.7 9.2 124 7-137 67-207 (264)
306 4fo4_A Inosine 5'-monophosphat 77.5 9.3 0.00032 35.2 8.8 113 120-236 110-236 (366)
307 3ble_A Citramalate synthase fr 77.1 3.2 0.00011 37.8 5.5 71 16-91 167-242 (337)
308 3hgj_A Chromate reductase; TIM 76.5 8.2 0.00028 35.0 8.1 85 4-92 222-316 (349)
309 1p4c_A L(+)-mandelate dehydrog 76.0 30 0.001 31.7 11.9 83 50-136 212-306 (380)
310 2cw6_A Hydroxymethylglutaryl-C 76.0 3.7 0.00013 36.5 5.5 72 15-91 153-229 (298)
311 3ppg_A 5-methyltetrahydroptero 75.8 8 0.00027 39.4 8.4 21 19-39 617-637 (789)
312 2qiw_A PEP phosphonomutase; st 75.7 17 0.00057 31.8 9.6 113 21-138 96-237 (255)
313 1ub3_A Aldolase protein; schif 75.7 29 0.00098 29.5 10.9 142 119-268 21-186 (220)
314 1o66_A 3-methyl-2-oxobutanoate 75.7 35 0.0012 30.2 11.7 111 24-138 30-182 (275)
315 1u1j_A 5-methyltetrahydroptero 75.5 11 0.00038 38.1 9.5 76 19-96 586-671 (765)
316 1eep_A Inosine 5'-monophosphat 75.5 17 0.0006 33.4 10.2 72 66-137 143-222 (404)
317 3f6p_A Transcriptional regulat 75.4 20 0.00069 25.8 9.5 83 67-153 27-115 (120)
318 4hb7_A Dihydropteroate synthas 75.1 31 0.001 30.5 11.1 58 77-135 33-106 (270)
319 3k30_A Histamine dehydrogenase 74.7 5.7 0.0002 39.3 7.1 117 18-137 156-324 (690)
320 1gvf_A Tagatose-bisphosphate a 74.7 13 0.00045 33.1 8.7 78 17-95 154-233 (286)
321 1ydo_A HMG-COA lyase; TIM-barr 74.6 2.8 9.6E-05 37.7 4.4 72 15-91 154-230 (307)
322 3vkj_A Isopentenyl-diphosphate 74.6 24 0.00082 32.4 10.8 79 58-136 113-217 (368)
323 4gj1_A 1-(5-phosphoribosyl)-5- 74.6 40 0.0014 28.8 11.7 118 13-137 29-171 (243)
324 2nq5_A 5-methyltetrahydroptero 74.5 12 0.00041 37.8 9.4 76 19-96 571-656 (755)
325 1q7z_A 5-methyltetrahydrofolat 74.1 53 0.0018 31.9 13.6 55 80-134 346-410 (566)
326 4djd_D C/Fe-SP, corrinoid/iron 74.1 48 0.0016 29.9 12.5 128 74-207 80-235 (323)
327 1o94_A Tmadh, trimethylamine d 74.1 14 0.00046 36.9 9.7 116 19-137 150-321 (729)
328 3f6c_A Positive transcription 73.9 20 0.00068 26.1 8.6 85 67-154 26-117 (134)
329 3w01_A Heptaprenylglyceryl pho 73.9 43 0.0015 28.9 12.1 167 70-254 14-226 (235)
330 3k13_A 5-methyltetrahydrofolat 73.9 34 0.0012 30.6 11.3 99 13-138 32-141 (300)
331 1sfl_A 3-dehydroquinate dehydr 73.5 42 0.0014 28.6 12.0 142 5-152 3-176 (238)
332 1mdl_A Mandelate racemase; iso 73.1 21 0.00071 32.1 10.0 118 15-139 143-272 (359)
333 1to3_A Putative aldolase YIHT; 73.1 50 0.0017 29.3 12.9 171 19-254 49-284 (304)
334 1vyr_A Pentaerythritol tetrani 73.1 11 0.00038 34.5 8.1 65 23-91 256-320 (364)
335 3vcn_A Mannonate dehydratase; 73.0 53 0.0018 30.4 13.0 126 11-139 145-310 (425)
336 1gvf_A Tagatose-bisphosphate a 73.0 22 0.00074 31.6 9.8 128 10-139 76-234 (286)
337 3sr7_A Isopentenyl-diphosphate 72.7 6.2 0.00021 36.4 6.3 76 62-137 142-237 (365)
338 1f6y_A 5-methyltetrahydrofolat 72.6 48 0.0016 28.8 12.5 99 16-138 23-124 (262)
339 1vcf_A Isopentenyl-diphosphate 72.6 32 0.0011 30.7 11.0 39 52-93 171-211 (332)
340 3k13_A 5-methyltetrahydrofolat 72.5 53 0.0018 29.3 14.2 59 76-134 39-110 (300)
341 3qc0_A Sugar isomerase; TIM ba 71.9 42 0.0014 27.9 12.0 85 6-96 5-105 (275)
342 4ef8_A Dihydroorotate dehydrog 71.9 16 0.00054 33.5 8.8 82 7-93 128-227 (354)
343 4af0_A Inosine-5'-monophosphat 71.9 8.1 0.00028 37.6 7.1 65 21-93 283-349 (556)
344 3eoo_A Methylisocitrate lyase; 71.7 39 0.0013 30.1 11.2 118 16-138 96-240 (298)
345 3l5l_A Xenobiotic reductase A; 71.4 8 0.00027 35.4 6.7 84 4-91 228-322 (363)
346 3hzh_A Chemotaxis response reg 71.2 26 0.00089 26.6 8.9 84 67-153 61-153 (157)
347 2h9a_B CO dehydrogenase/acetyl 70.5 59 0.002 29.1 12.9 113 74-191 74-211 (310)
348 3o6c_A PNP synthase, pyridoxin 70.4 33 0.0011 30.1 10.0 103 75-189 26-134 (260)
349 1tx2_A DHPS, dihydropteroate s 70.3 30 0.001 30.9 10.1 94 20-138 65-167 (297)
350 2ovl_A Putative racemase; stru 70.2 21 0.0007 32.4 9.3 143 16-169 146-303 (371)
351 1z41_A YQJM, probable NADH-dep 69.9 15 0.0005 33.1 8.1 84 4-91 212-304 (338)
352 1aj0_A DHPS, dihydropteroate s 69.7 41 0.0014 29.7 10.8 94 19-138 39-141 (282)
353 2hzg_A Mandelate racemase/muco 69.6 59 0.002 29.6 12.4 148 15-169 144-311 (401)
354 3gl9_A Response regulator; bet 69.4 29 0.00099 25.0 8.6 83 67-153 27-118 (122)
355 1u83_A Phosphosulfolactate syn 69.3 40 0.0014 29.8 10.4 126 19-161 111-250 (276)
356 1x1o_A Nicotinate-nucleotide p 68.4 3 0.0001 37.2 3.1 70 201-276 184-258 (286)
357 3ayv_A Putative uncharacterize 68.3 46 0.0016 27.6 10.6 75 15-97 7-99 (254)
358 2gl5_A Putative dehydratase pr 68.2 24 0.00082 32.4 9.4 121 16-139 150-301 (410)
359 1gox_A (S)-2-hydroxy-acid oxid 68.2 70 0.0024 29.0 13.3 83 50-136 212-308 (370)
360 3hv2_A Response regulator/HD d 68.1 36 0.0012 25.5 10.7 84 66-153 38-129 (153)
361 3hbl_A Pyruvate carboxylase; T 67.9 40 0.0014 35.7 11.9 41 53-93 595-646 (1150)
362 3vav_A 3-methyl-2-oxobutanoate 67.5 65 0.0022 28.4 11.8 110 25-138 43-194 (275)
363 2isw_A Putative fructose-1,6-b 67.5 28 0.00096 31.5 9.3 100 17-139 152-257 (323)
364 3e49_A Uncharacterized protein 67.2 14 0.00049 33.2 7.3 60 79-138 37-114 (311)
365 1f6y_A 5-methyltetrahydrofolat 67.2 62 0.0021 28.0 14.2 60 76-135 27-96 (262)
366 1rvg_A Fructose-1,6-bisphospha 67.0 30 0.001 31.0 9.4 122 10-133 74-228 (305)
367 2nq5_A 5-methyltetrahydroptero 66.8 36 0.0012 34.3 10.9 73 20-99 183-262 (755)
368 3rmj_A 2-isopropylmalate synth 66.6 8.1 0.00028 35.6 5.7 75 13-91 152-233 (370)
369 2nv1_A Pyridoxal biosynthesis 66.0 22 0.00074 31.4 8.3 206 20-254 30-256 (305)
370 2zad_A Muconate cycloisomerase 66.0 47 0.0016 29.6 10.7 115 15-138 138-266 (345)
371 2qr6_A IMP dehydrogenase/GMP r 65.9 24 0.00082 32.3 8.8 82 53-136 146-238 (393)
372 3l5a_A NADH/flavin oxidoreduct 65.5 18 0.00062 33.8 7.9 115 19-137 171-346 (419)
373 3h5i_A Response regulator/sens 65.3 23 0.00077 26.2 7.3 83 67-153 30-120 (140)
374 2ztj_A Homocitrate synthase; ( 65.2 55 0.0019 30.0 11.1 64 22-93 29-93 (382)
375 2ze3_A DFA0005; organic waste 64.9 61 0.0021 28.4 10.9 116 16-138 90-233 (275)
376 1pii_A N-(5'phosphoribosyl)ant 64.8 58 0.002 30.8 11.4 169 75-254 69-254 (452)
377 2gdq_A YITF; mandelate racemas 64.8 43 0.0015 30.4 10.3 144 18-169 141-300 (382)
378 3zwt_A Dihydroorotate dehydrog 64.6 35 0.0012 31.2 9.6 133 119-251 163-343 (367)
379 3eez_A Putative mandelate race 64.5 39 0.0013 30.8 9.9 152 7-168 136-301 (378)
380 2hjp_A Phosphonopyruvate hydro 64.3 66 0.0023 28.4 11.1 119 16-138 88-236 (290)
381 2agk_A 1-(5-phosphoribosyl)-5- 64.2 19 0.00064 31.3 7.3 108 23-135 89-234 (260)
382 2ffc_A Orotidine 5-monophospha 64.2 11 0.00037 34.7 6.0 47 48-96 140-198 (353)
383 3bg3_A Pyruvate carboxylase, m 64.1 7.6 0.00026 39.1 5.3 71 16-91 259-334 (718)
384 3q94_A Fructose-bisphosphate a 64.0 23 0.0008 31.5 8.0 77 17-94 158-236 (288)
385 2qde_A Mandelate racemase/muco 63.9 36 0.0012 31.0 9.7 146 15-168 144-304 (397)
386 1rvg_A Fructose-1,6-bisphospha 63.9 29 0.001 31.1 8.7 72 17-89 152-227 (305)
387 1tv8_A MOAA, molybdenum cofact 63.8 76 0.0026 27.8 13.1 87 16-109 51-139 (340)
388 2gou_A Oxidoreductase, FMN-bin 63.5 19 0.00065 32.9 7.6 65 22-91 254-319 (365)
389 2p10_A MLL9387 protein; putati 63.4 23 0.0008 31.5 7.8 85 55-139 85-192 (286)
390 1zlp_A PSR132, petal death pro 63.0 23 0.00078 32.0 7.8 118 16-138 114-258 (318)
391 1oy0_A Ketopantoate hydroxymet 62.9 80 0.0027 27.9 11.2 110 25-138 48-200 (281)
392 3gt7_A Sensor protein; structu 62.9 46 0.0016 25.0 9.4 79 72-153 36-123 (154)
393 3ozy_A Putative mandelate race 62.9 83 0.0028 28.6 11.9 140 14-161 149-304 (389)
394 3oix_A Putative dihydroorotate 62.8 25 0.00087 31.9 8.2 124 7-136 130-303 (345)
395 1mzh_A Deoxyribose-phosphate a 62.7 68 0.0023 26.9 12.0 119 22-153 74-215 (225)
396 3qw4_B UMP synthase; N-termina 62.4 13 0.00044 35.2 6.3 94 10-111 16-126 (453)
397 3o07_A Pyridoxine biosynthesis 62.2 78 0.0027 28.2 10.9 69 21-100 80-148 (291)
398 3eeg_A 2-isopropylmalate synth 62.0 9.7 0.00033 34.4 5.2 74 14-91 147-227 (325)
399 3hdv_A Response regulator; PSI 62.0 39 0.0013 24.5 8.0 79 73-154 37-124 (136)
400 3tfx_A Orotidine 5'-phosphate 62.0 7.4 0.00025 34.2 4.3 171 71-254 11-234 (259)
401 2wvv_A Alpha-L-fucosidase; alp 61.7 29 0.001 32.7 8.7 108 75-222 79-199 (450)
402 3l23_A Sugar phosphate isomera 61.5 79 0.0027 27.3 12.1 34 5-40 12-49 (303)
403 3dx5_A Uncharacterized protein 61.3 73 0.0025 26.8 10.9 88 6-96 1-106 (286)
404 2p8b_A Mandelate racemase/muco 61.3 38 0.0013 30.5 9.2 146 15-168 140-301 (369)
405 4e7p_A Response regulator; DNA 61.2 44 0.0015 24.9 8.3 80 72-154 51-137 (150)
406 3cg0_A Response regulator rece 61.2 44 0.0015 24.2 9.0 84 67-153 34-124 (140)
407 3lte_A Response regulator; str 61.2 43 0.0015 24.1 8.5 80 72-154 35-122 (132)
408 3ffs_A Inosine-5-monophosphate 61.1 37 0.0013 31.5 9.2 68 21-95 146-213 (400)
409 4adt_A Pyridoxine biosynthetic 61.0 16 0.00056 32.6 6.4 60 75-134 29-104 (297)
410 3apt_A Methylenetetrahydrofola 61.0 89 0.0031 27.7 12.5 152 17-175 28-221 (310)
411 3eul_A Possible nitrate/nitrit 60.9 49 0.0017 24.6 8.7 80 72-154 46-132 (152)
412 2bdq_A Copper homeostasis prot 60.9 75 0.0026 27.1 10.3 90 17-110 75-173 (224)
413 3chv_A Prokaryotic domain of u 60.7 33 0.0011 30.4 8.3 84 79-163 39-150 (284)
414 1yx1_A Hypothetical protein PA 60.7 73 0.0025 26.6 13.2 85 7-96 7-106 (264)
415 3jte_A Response regulator rece 60.5 47 0.0016 24.3 9.2 79 72-153 32-119 (143)
416 3ppg_A 5-methyltetrahydroptero 60.2 45 0.0016 33.8 10.2 74 20-99 222-301 (789)
417 3bjs_A Mandelate racemase/muco 60.1 49 0.0017 30.7 9.9 146 15-169 183-345 (428)
418 1r0m_A N-acylamino acid racema 60.1 97 0.0033 27.8 12.9 142 16-168 148-303 (375)
419 3c2e_A Nicotinate-nucleotide p 60.0 9.5 0.00033 34.0 4.7 78 53-136 187-276 (294)
420 1rqb_A Transcarboxylase 5S sub 59.9 10 0.00035 36.8 5.2 71 16-91 173-249 (539)
421 3n53_A Response regulator rece 59.2 44 0.0015 24.4 7.9 83 67-153 27-118 (140)
422 3n9r_A Fructose-bisphosphate a 59.1 29 0.00098 31.2 7.7 98 17-137 154-255 (307)
423 2o56_A Putative mandelate race 58.8 63 0.0021 29.5 10.3 121 16-139 152-298 (407)
424 2qr3_A Two-component system re 58.5 49 0.0017 23.9 10.4 85 66-154 27-123 (140)
425 3eod_A Protein HNR; response r 58.4 45 0.0015 23.9 7.7 63 73-135 37-106 (130)
426 3lye_A Oxaloacetate acetyl hyd 57.9 1E+02 0.0036 27.5 12.8 119 16-139 101-249 (307)
427 2qgy_A Enolase from the enviro 57.8 63 0.0022 29.4 10.1 141 15-162 148-303 (391)
428 3hdg_A Uncharacterized protein 57.4 48 0.0016 24.1 7.8 79 72-153 36-121 (137)
429 3zwt_A Dihydroorotate dehydrog 57.3 84 0.0029 28.6 10.8 124 8-137 149-327 (367)
430 1sjd_A N-acylamino acid racema 57.3 1.1E+02 0.0036 27.4 12.9 142 16-168 141-297 (368)
431 1vrd_A Inosine-5'-monophosphat 57.2 24 0.00082 33.3 7.3 117 18-139 174-308 (494)
432 1ypf_A GMP reductase; GUAC, pu 57.0 44 0.0015 29.9 8.7 83 52-136 84-176 (336)
433 1pv8_A Delta-aminolevulinic ac 56.9 1.1E+02 0.0039 27.6 14.9 175 10-216 51-274 (330)
434 1tx2_A DHPS, dihydropteroate s 56.8 1.1E+02 0.0036 27.2 14.7 57 78-134 67-139 (297)
435 3eww_A Ompdecase, orotidine-5' 56.8 30 0.001 30.3 7.3 89 49-139 18-125 (260)
436 2qxy_A Response regulator; reg 56.7 55 0.0019 23.9 8.8 82 67-153 29-117 (142)
437 3ffs_A Inosine-5-monophosphate 56.6 26 0.00088 32.6 7.2 61 77-139 146-214 (400)
438 1rvk_A Isomerase/lactonizing e 56.3 76 0.0026 28.6 10.3 144 15-161 148-309 (382)
439 3tva_A Xylose isomerase domain 56.3 55 0.0019 27.7 8.9 49 17-70 20-70 (290)
440 3sjn_A Mandelate racemase/muco 56.2 58 0.002 29.5 9.5 140 18-162 148-303 (374)
441 2ps2_A Putative mandelate race 56.1 64 0.0022 29.0 9.7 148 11-168 141-303 (371)
442 1tzz_A Hypothetical protein L1 56.0 57 0.002 29.6 9.5 117 16-139 165-297 (392)
443 1nsj_A PRAI, phosphoribosyl an 55.9 88 0.003 26.0 11.0 110 22-138 13-127 (205)
444 3cz5_A Two-component response 55.8 60 0.0021 24.1 10.6 86 66-154 30-122 (153)
445 2a9o_A Response regulator; ess 55.8 50 0.0017 23.1 8.8 82 68-153 27-114 (120)
446 3mz2_A Glycerophosphoryl diest 55.6 41 0.0014 29.6 8.1 97 49-153 164-277 (292)
447 3r0j_A Possible two component 55.5 67 0.0023 26.5 9.2 83 67-153 48-137 (250)
448 1nvm_A HOA, 4-hydroxy-2-oxoval 55.3 18 0.00063 32.6 5.9 73 15-91 146-223 (345)
449 1tkk_A Similar to chloromucona 55.0 68 0.0023 28.7 9.7 147 15-168 139-302 (366)
450 3q9s_A DNA-binding response re 54.6 55 0.0019 27.2 8.6 80 72-154 66-151 (249)
451 3go2_A Putative L-alanine-DL-g 54.6 76 0.0026 29.1 10.2 147 16-168 143-324 (409)
452 1h7n_A 5-aminolaevulinic acid 54.5 1.3E+02 0.0043 27.4 13.6 96 10-110 61-191 (342)
453 3pm6_A Putative fructose-bisph 54.3 38 0.0013 30.4 7.6 127 10-139 84-253 (306)
454 3qw4_B UMP synthase; N-termina 54.3 1.4E+02 0.0048 28.0 12.0 135 88-236 46-219 (453)
455 2q02_A Putative cytoplasmic pr 54.0 93 0.0032 25.7 16.6 32 6-37 7-38 (272)
456 2isw_A Putative fructose-1,6-b 53.9 38 0.0013 30.7 7.6 122 10-133 77-230 (323)
457 2qzj_A Two-component response 53.8 62 0.0021 23.6 9.2 79 72-153 33-117 (136)
458 1olt_A Oxygen-independent copr 53.7 20 0.00069 33.5 6.1 109 19-137 88-209 (457)
459 3ks6_A Glycerophosphoryl diest 53.6 71 0.0024 27.0 9.2 59 22-92 172-230 (250)
460 3ewb_X 2-isopropylmalate synth 53.5 38 0.0013 29.9 7.5 107 21-137 30-170 (293)
461 4fxs_A Inosine-5'-monophosphat 53.5 31 0.0011 32.8 7.4 64 75-138 231-301 (496)
462 2nx9_A Oxaloacetate decarboxyl 53.4 19 0.00065 34.2 5.8 70 16-91 156-230 (464)
463 3sbf_A Mandelate racemase / mu 53.3 66 0.0023 29.4 9.5 126 11-139 128-284 (401)
464 2y7e_A 3-keto-5-aminohexanoate 53.3 41 0.0014 29.7 7.7 84 79-163 39-151 (282)
465 1ps9_A 2,4-dienoyl-COA reducta 52.9 41 0.0014 32.9 8.4 85 6-93 213-309 (671)
466 1s8n_A Putative antiterminator 52.9 74 0.0025 25.1 8.8 84 67-153 38-127 (205)
467 4a29_A Engineered retro-aldol 52.8 66 0.0022 28.1 8.7 171 74-254 64-248 (258)
468 2og9_A Mandelate racemase/muco 52.6 37 0.0013 31.0 7.6 144 16-170 162-320 (393)
469 3dxi_A Putative aldolase; TIM 52.2 1.3E+02 0.0044 26.9 11.9 72 19-97 25-110 (320)
470 1dbw_A Transcriptional regulat 51.6 62 0.0021 23.0 8.4 78 73-153 33-117 (126)
471 3r8r_A Transaldolase; pentose 51.6 48 0.0017 28.1 7.5 89 46-138 86-187 (212)
472 3mwc_A Mandelate racemase/muco 51.4 1.4E+02 0.0049 27.2 12.4 141 17-168 164-319 (400)
473 3qw3_A Orotidine-5-phosphate d 51.3 50 0.0017 28.6 7.8 60 49-111 57-125 (255)
474 3kto_A Response regulator rece 51.2 32 0.0011 25.2 5.9 79 73-154 36-123 (136)
475 2fds_A Orotidine-monophosphate 51.2 21 0.00071 32.7 5.5 57 48-109 130-198 (352)
476 3stp_A Galactonate dehydratase 51.1 50 0.0017 30.5 8.3 122 14-138 177-312 (412)
477 1qtw_A Endonuclease IV; DNA re 51.1 52 0.0018 27.6 7.9 89 7-97 3-112 (285)
478 2bdq_A Copper homeostasis prot 50.9 24 0.00082 30.3 5.5 35 242-276 161-196 (224)
479 3jva_A Dipeptide epimerase; en 50.7 56 0.0019 29.3 8.4 120 11-138 134-265 (354)
480 2gwr_A DNA-binding response re 50.6 82 0.0028 25.6 8.9 80 72-154 34-119 (238)
481 2c6q_A GMP reductase 2; TIM ba 50.5 46 0.0016 30.1 7.8 66 22-93 121-188 (351)
482 3tji_A Mandelate racemase/muco 50.2 77 0.0026 29.3 9.4 127 10-139 148-305 (422)
483 1s2w_A Phosphoenolpyruvate pho 50.1 1.4E+02 0.0046 26.4 11.0 119 16-138 92-239 (295)
484 3v3w_A Starvation sensing prot 49.9 1.6E+02 0.0054 27.2 12.3 126 11-139 144-309 (424)
485 1w8s_A FBP aldolase, fructose- 49.5 1.3E+02 0.0043 25.9 13.5 155 74-277 41-215 (263)
486 3mcm_A 2-amino-4-hydroxy-6-hyd 49.5 85 0.0029 29.6 9.6 150 15-209 209-388 (442)
487 2oqr_A Sensory transduction pr 49.4 61 0.0021 26.1 7.8 83 68-154 30-118 (230)
488 3kts_A Glycerol uptake operon 49.3 42 0.0015 28.0 6.7 75 7-92 103-177 (192)
489 1kgs_A DRRD, DNA binding respo 49.2 84 0.0029 25.0 8.6 82 68-153 28-116 (225)
490 1tmy_A CHEY protein, TMY; chem 49.2 65 0.0022 22.6 8.6 79 72-153 32-117 (120)
491 1q7z_A 5-methyltetrahydrofolat 49.0 87 0.003 30.4 9.9 108 21-135 129-270 (566)
492 2hk0_A D-psicose 3-epimerase; 48.7 1.3E+02 0.0043 25.7 11.8 86 6-95 21-128 (309)
493 3eyp_A Putative alpha-L-fucosi 48.7 38 0.0013 32.1 7.1 25 75-99 55-79 (469)
494 2oz8_A MLL7089 protein; struct 48.7 1.4E+02 0.0047 27.0 10.8 131 16-157 145-292 (389)
495 4ay7_A Methylcobalamin\: coenz 48.6 1.4E+02 0.0049 26.4 10.7 69 22-94 194-269 (348)
496 3q45_A Mandelate racemase/muco 48.5 1.1E+02 0.0039 27.4 10.2 150 11-168 135-299 (368)
497 2qgq_A Protein TM_1862; alpha- 48.4 53 0.0018 28.7 7.7 74 21-94 101-191 (304)
498 1uas_A Alpha-galactosidase; TI 48.4 77 0.0026 28.5 8.9 79 15-95 23-131 (362)
499 3b8i_A PA4872 oxaloacetate dec 48.3 1.4E+02 0.0049 26.2 11.0 118 16-138 95-235 (287)
500 2poz_A Putative dehydratase; o 48.3 68 0.0023 29.1 8.7 122 15-139 136-282 (392)
No 1
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=100.00 E-value=2.4e-52 Score=373.61 Aligned_cols=207 Identities=38% Similarity=0.617 Sum_probs=192.6
Q ss_pred ceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHh
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMAD 85 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ 85 (277)
++|+|||||+|+.+|+++++++++.|+||+|+|||||+||||++||+++++++|+..|++++|+|||+.||++|++.+.+
T Consensus 28 ~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~ 107 (246)
T 3inp_A 28 IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAK 107 (246)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHH
T ss_pred CeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999997559999999999999999999999
Q ss_pred cCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCC
Q psy11600 86 ANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPK 165 (277)
Q Consensus 86 ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~ 165 (277)
+|+|++|||.|+.+ ++.+.++.|++.|++.|++++|+
T Consensus 108 aGAd~itvH~Ea~~-------------------------------------------~~~~~i~~ir~~G~k~Gvalnp~ 144 (246)
T 3inp_A 108 AGATSIVFHPEASE-------------------------------------------HIDRSLQLIKSFGIQAGLALNPA 144 (246)
T ss_dssp HTCSEEEECGGGCS-------------------------------------------CHHHHHHHHHTTTSEEEEEECTT
T ss_pred cCCCEEEEccccch-------------------------------------------hHHHHHHHHHHcCCeEEEEecCC
Confidence 99999999999887 77889999999999999999999
Q ss_pred CCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhC----CCccEEEeCCCCcCcHHHHHHccCCC---CC
Q psy11600 166 TPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENY----PTLNIEVDGGVGPNTIDECAKCLTGF---GG 238 (277)
Q Consensus 166 t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~----~~~~i~vdGgV~~~tv~~~~~~gpg~---gg 238 (277)
||++.++++++.+|++++|+|+|||+||+|+++.++||++++++. .++.|+|||||+.+|++++.++|++. |+
T Consensus 145 Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~GS 224 (246)
T 3inp_A 145 TGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGS 224 (246)
T ss_dssp CCSGGGTTTGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESH
T ss_pred CCHHHHHHHHhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEeh
Confidence 999999999999999999999999999999999999999998764 46899999999999999999999996 77
Q ss_pred cccc-cCHHHHHHHHHhh
Q psy11600 239 QKFM-QDMMPKVKWLREN 255 (277)
Q Consensus 239 q~F~-~~~~~kI~~l~~~ 255 (277)
..|. ++..+.++++|+.
T Consensus 225 aIf~a~dp~~~i~~l~~~ 242 (246)
T 3inp_A 225 AIFNSDSYKQTIDKMRDE 242 (246)
T ss_dssp HHHTSSCHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHH
Confidence 8887 5777888888763
No 2
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=100.00 E-value=8.8e-51 Score=360.33 Aligned_cols=208 Identities=58% Similarity=1.041 Sum_probs=196.7
Q ss_pred CCceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeeccCcHHhHHH
Q psy11600 4 VQCMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQNPQQWIEP 82 (277)
Q Consensus 4 ~~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~~p~~~i~~ 82 (277)
.+++|+|||||+|+.+|+++++.+++.|+||+|+|||||+||||++||+++++++|+.+ |++++|+|||+.||++|++.
T Consensus 3 ~~~~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~ 82 (228)
T 3ovp_A 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKP 82 (228)
T ss_dssp -CCEEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHH
T ss_pred CCcEeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999975 89999999999999999999
Q ss_pred HHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceee
Q psy11600 83 MADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAI 162 (277)
Q Consensus 83 l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i 162 (277)
+.++|+|++|||.|+.+ ++.+.++.+++.|++.|+++
T Consensus 83 ~~~aGad~itvH~Ea~~-------------------------------------------~~~~~i~~i~~~G~k~gval 119 (228)
T 3ovp_A 83 MAVAGANQYTFHLEATE-------------------------------------------NPGALIKDIRENGMKVGLAI 119 (228)
T ss_dssp HHHHTCSEEEEEGGGCS-------------------------------------------CHHHHHHHHHHTTCEEEEEE
T ss_pred HHHcCCCEEEEccCCch-------------------------------------------hHHHHHHHHHHcCCCEEEEE
Confidence 99999999999999877 67888999999999999999
Q ss_pred CCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---CCc
Q psy11600 163 KPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF---GGQ 239 (277)
Q Consensus 163 ~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~---ggq 239 (277)
+|+||++.+++++..+|++++|+++|||+||+|++..++||+++++..+++.++|||||+.+|++.+.++|++. |+.
T Consensus 120 ~p~t~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsa 199 (228)
T 3ovp_A 120 KPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSA 199 (228)
T ss_dssp CTTSCGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEESHH
T ss_pred cCCCCHHHHHHHhccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEeHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999996 778
Q ss_pred ccc-cCHHHHHHHHHh
Q psy11600 240 KFM-QDMMPKVKWLRE 254 (277)
Q Consensus 240 ~F~-~~~~~kI~~l~~ 254 (277)
.|. ++..+.++++++
T Consensus 200 If~a~dp~~~~~~l~~ 215 (228)
T 3ovp_A 200 IMRSEDPRSVINLLRN 215 (228)
T ss_dssp HHTCSCHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHH
Confidence 887 567777888775
No 3
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=100.00 E-value=1.9e-50 Score=358.86 Aligned_cols=203 Identities=34% Similarity=0.573 Sum_probs=191.7
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a 86 (277)
+|+|||||+|+.+|+++++.+ +.|+||+|+|||||+||||++||++.++++|+. |++++|+|||+.||++|++.+.++
T Consensus 2 ~i~pSila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~-~~~~~dvhLmv~dp~~~i~~~~~a 79 (231)
T 3ctl_A 2 KISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKL-ATKPLDCHLMVTRPQDYIAQLARA 79 (231)
T ss_dssp EEEEBGGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTT-CCSCEEEEEESSCGGGTHHHHHHH
T ss_pred eEEeehhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhc-cCCcEEEEEEecCHHHHHHHHHHc
Confidence 599999999999999999999 899999999999999999999999999999985 899999999999999999999999
Q ss_pred CCCeEEEeccC-CCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCC
Q psy11600 87 NVDQYTFHVEP-VDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPK 165 (277)
Q Consensus 87 g~d~i~~H~e~-~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~ 165 (277)
|+|++|||+|+ .+ ++.+.++.|++.|++.|++++|+
T Consensus 80 GAd~itvh~Ea~~~-------------------------------------------~~~~~i~~i~~~G~k~gv~lnp~ 116 (231)
T 3ctl_A 80 GADFITLHPETING-------------------------------------------QAFRLIDEIRRHDMKVGLILNPE 116 (231)
T ss_dssp TCSEEEECGGGCTT-------------------------------------------THHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCEEEECcccCCc-------------------------------------------cHHHHHHHHHHcCCeEEEEEECC
Confidence 99999999998 76 77889999999999999999999
Q ss_pred CCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC----CccEEEeCCCCcCcHHHHHHccCCC---C-
Q psy11600 166 TPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGGVGPNTIDECAKCLTGF---G- 237 (277)
Q Consensus 166 t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~----~~~i~vdGgV~~~tv~~~~~~gpg~---g- 237 (277)
||++.++++++.+|++++|+++|||+||+|+++.++||++++++.. ++.|+|||||+.+|+.++.++|++. |
T Consensus 117 tp~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G~ 196 (231)
T 3ctl_A 117 TPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGT 196 (231)
T ss_dssp CCGGGGTTTGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEECT
T ss_pred CcHHHHHHHHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEcc
Confidence 9999999999999999999999999999999999999999998653 6889999999999999999999996 8
Q ss_pred Cccccc-C-HHHHHHHHHh
Q psy11600 238 GQKFMQ-D-MMPKVKWLRE 254 (277)
Q Consensus 238 gq~F~~-~-~~~kI~~l~~ 254 (277)
+..|.. + ..+.++++|+
T Consensus 197 saif~~~d~~~~~~~~l~~ 215 (231)
T 3ctl_A 197 SGLFNHAENIDEAWRIMTA 215 (231)
T ss_dssp TTTGGGCSSHHHHHHHHHH
T ss_pred HHHhCCCCcHHHHHHHHHH
Confidence 888874 6 7788888876
No 4
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=100.00 E-value=3.7e-50 Score=356.00 Aligned_cols=210 Identities=40% Similarity=0.710 Sum_probs=193.9
Q ss_pred CCCCCceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhH
Q psy11600 1 MSHVQCMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWI 80 (277)
Q Consensus 1 ~~~~~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i 80 (277)
|.+.+.+|+|||||+|+.+|+++++.+++.|+||+|+|||||+||||++||++.++++|+..|+.++|+|||+.||++|+
T Consensus 1 ~~~~~~~i~pSila~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i 80 (227)
T 1tqx_A 1 MGTLKAIIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYV 80 (227)
T ss_dssp ---CCCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGG
T ss_pred CCCCCCeEEeehhcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHH
Confidence 56788899999999999999999999999999999999999999999999999999999975599999999999999999
Q ss_pred HHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHH---HHHHhCCc
Q psy11600 81 EPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIR---QIKEAGMK 157 (277)
Q Consensus 81 ~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~---~I~~~g~~ 157 (277)
+.+.+ +|++|||+|+.+. ++.+.++ .|++.|++
T Consensus 81 ~~~~~--Ad~itvH~ea~~~------------------------------------------~~~~~i~~~~~i~~~G~k 116 (227)
T 1tqx_A 81 PLLKT--SNQLTFHFEALNE------------------------------------------DTERCIQLAKEIRDNNLW 116 (227)
T ss_dssp GGCTT--SSEEEEEGGGGTT------------------------------------------CHHHHHHHHHHHHTTTCE
T ss_pred HHHHh--CCEEEEeecCCcc------------------------------------------CHHHHHHHHHHHHHcCCe
Confidence 99887 9999999998651 4667888 99999999
Q ss_pred cceeeCCCCCHHhHHHHHh--hcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCC
Q psy11600 158 VGLAIKPKTPVDVIAEYIE--SADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTG 235 (277)
Q Consensus 158 ~g~~i~p~t~~~~i~~~i~--~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg 235 (277)
.|++++|+||++.++++++ .+|++++|+++|||+||+|.+..++||++++++.+++.|+|||||+.+|+.++.++|++
T Consensus 117 ~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd 196 (227)
T 1tqx_A 117 CGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGAN 196 (227)
T ss_dssp EEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCC
T ss_pred EEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcCCC
Confidence 9999999999999999999 89999999999999999999999999999999888899999999999999999999999
Q ss_pred C---CCccccc-CHHHHHHHHHh
Q psy11600 236 F---GGQKFMQ-DMMPKVKWLRE 254 (277)
Q Consensus 236 ~---ggq~F~~-~~~~kI~~l~~ 254 (277)
. |+..|.. +..+.++++|+
T Consensus 197 ~~V~GsaIf~~~d~~~~i~~l~~ 219 (227)
T 1tqx_A 197 IIVAGTSIFNAEDPKYVIDTMRV 219 (227)
T ss_dssp EEEESHHHHTCSSHHHHHHHHHH
T ss_pred EEEEeHHHhCCCCHHHHHHHHHH
Confidence 6 8888874 77788888875
No 5
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=100.00 E-value=3.2e-46 Score=332.63 Aligned_cols=203 Identities=19% Similarity=0.348 Sum_probs=189.5
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a 86 (277)
+|+|||||+|+.+|.++++.+++.|+||+|+|||||+||||++||++.++++|+. ++. |+|||+.||++|++.+.++
T Consensus 15 ~i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~-~~~--DvhLMv~~p~~~i~~~~~a 91 (237)
T 3cu2_A 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTH-CFK--DVHLMVRNQLEVAKAVVAN 91 (237)
T ss_dssp CEEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTT-SEE--EEEEECSCHHHHHHHHHHT
T ss_pred eEEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhh-CCC--CeEEEEECHHHHHHHHHHc
Confidence 3999999999999999999999999999999999999999999999999999985 554 9999999999999999999
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHh---------CCc
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEA---------GMK 157 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~---------g~~ 157 (277)
|||++|||+|+.+ ++.+.++.|++. |++
T Consensus 92 GAd~itvH~ea~~-------------------------------------------~~~~~i~~i~~~~~~~~~~~~g~~ 128 (237)
T 3cu2_A 92 GANLVTLQLEQYH-------------------------------------------DFALTIEWLAKQKTTYANQVYPVL 128 (237)
T ss_dssp TCSEEEEETTCTT-------------------------------------------SHHHHHHHHTTCEEEETTEEEECE
T ss_pred CCCEEEEecCCcc-------------------------------------------cHHHHHHHHHhcccccccccCCce
Confidence 9999999999887 677888999999 999
Q ss_pred cceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC----CccEEEeCCCCcCcHHHHHH--
Q psy11600 158 VGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGGVGPNTIDECAK-- 231 (277)
Q Consensus 158 ~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~----~~~i~vdGgV~~~tv~~~~~-- 231 (277)
.|++++|+||++.++++++.+|++++|+++|||+||+|.+..++||+++++... ++.++|||||+.+|+.++.+
T Consensus 129 ~gv~l~p~Tp~~~l~~~l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~~~ 208 (237)
T 3cu2_A 129 IGACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGT 208 (237)
T ss_dssp EEEEECTTSCGGGGTTTTTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSS
T ss_pred EEEEEeCCChHHHHHHHhhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999998764 58899999999999999999
Q ss_pred ccCCC---CCcccccCHHHHHHHHHhh
Q psy11600 232 CLTGF---GGQKFMQDMMPKVKWLREN 255 (277)
Q Consensus 232 ~gpg~---ggq~F~~~~~~kI~~l~~~ 255 (277)
+|++. |+..|..+..+.++++|+.
T Consensus 209 aGad~~VvGSaIf~~d~~~~~~~l~~~ 235 (237)
T 3cu2_A 209 HQIDWLVSGSALFSGELKTNLKVWKSS 235 (237)
T ss_dssp SCCCCEEECGGGGSSCHHHHHHHHHHH
T ss_pred CCCcEEEEeeHHhCCCHHHHHHHHHHh
Confidence 99997 8888876777888888753
No 6
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=100.00 E-value=5.8e-42 Score=303.91 Aligned_cols=206 Identities=36% Similarity=0.657 Sum_probs=188.9
Q ss_pred ceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHh
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMAD 85 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ 85 (277)
++|+|||+|+|+.++.++++.+++.|+||+|+|+|||+|+||++||++.++++|+. +++++++|||+.||+++++.+.+
T Consensus 5 ~~i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~-~~~~~~vhlmv~dp~~~i~~~~~ 83 (230)
T 1tqj_A 5 IVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL-TKKTLDVHLMIVEPEKYVEDFAK 83 (230)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGG-CCSEEEEEEESSSGGGTHHHHHH
T ss_pred cEEEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhh-cCCcEEEEEEccCHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999985 78999999999999999999999
Q ss_pred cCCCeEEEecc--CCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeC
Q psy11600 86 ANVDQYTFHVE--PVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIK 163 (277)
Q Consensus 86 ag~d~i~~H~e--~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~ 163 (277)
+|+|++|||.| +.+ ...+..+.+++.|++.|+.++
T Consensus 84 aGadgv~vh~e~~~~~-------------------------------------------~~~~~~~~i~~~g~~~gv~~~ 120 (230)
T 1tqj_A 84 AGADIISVHVEHNASP-------------------------------------------HLHRTLCQIRELGKKAGAVLN 120 (230)
T ss_dssp HTCSEEEEECSTTTCT-------------------------------------------THHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEECcccccch-------------------------------------------hHHHHHHHHHHcCCcEEEEEe
Confidence 99999999999 877 677888999999999999999
Q ss_pred CCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC----CccEEEeCCCCcCcHHHHHHccCCC---
Q psy11600 164 PKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGGVGPNTIDECAKCLTGF--- 236 (277)
Q Consensus 164 p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~----~~~i~vdGgV~~~tv~~~~~~gpg~--- 236 (277)
|.||.+.+.++++.+|++++|+++|||++|+|.+..+++++++++..+ ++.+++||||+.+|+.++.++|++.
T Consensus 121 p~t~~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvv 200 (230)
T 1tqj_A 121 PSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVA 200 (230)
T ss_dssp TTCCGGGGTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEE
T ss_pred CCCcHHHHHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEE
Confidence 999999999999999999999999999999999999999999988653 7889999999999999999999996
Q ss_pred CCcccc-cCHHHHHHHHHhh
Q psy11600 237 GGQKFM-QDMMPKVKWLREN 255 (277)
Q Consensus 237 ggq~F~-~~~~~kI~~l~~~ 255 (277)
|+..|. ++..+.++++++.
T Consensus 201 GSai~~a~d~~~~~~~l~~~ 220 (230)
T 1tqj_A 201 GSAVFNAPNYAEAIAGVRNS 220 (230)
T ss_dssp SHHHHTSSCHHHHHHHHHTC
T ss_pred CHHHHCCCCHHHHHHHHHHH
Confidence 888887 4788888888864
No 7
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=100.00 E-value=1.3e-37 Score=274.94 Aligned_cols=207 Identities=46% Similarity=0.848 Sum_probs=192.0
Q ss_pred CCceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHH
Q psy11600 4 VQCMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPM 83 (277)
Q Consensus 4 ~~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l 83 (277)
...+|+|||+|+|+.++.++++.+++.|+|++|+|+|||+|+||+++|++.++++|+. ++.++++|||+.||+++++.+
T Consensus 5 ~~~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~-~~~~~~v~lmv~d~~~~i~~~ 83 (228)
T 1h1y_A 5 AAAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH-TKAYLDCHLMVTNPSDYVEPL 83 (228)
T ss_dssp -CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTT-CCSEEEEEEESSCGGGGHHHH
T ss_pred cCCeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhh-cCCcEEEEEEecCHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999985 688999999999999999999
Q ss_pred HhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCCh-HHHHHHHHHhCCccceee
Q psy11600 84 ADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNV-PQVIRQIKEAGMKVGLAI 162 (277)
Q Consensus 84 ~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~-~~~~~~I~~~g~~~g~~i 162 (277)
.++|+|++++|.+..+ .. ....+.+++.|++.|+.+
T Consensus 84 ~~agad~v~vH~~~~~-------------------------------------------~~~~~~~~~i~~~g~~igv~~ 120 (228)
T 1h1y_A 84 AKAGASGFTFHIEVSR-------------------------------------------DNWQELIQSIKAKGMRPGVSL 120 (228)
T ss_dssp HHHTCSEEEEEGGGCT-------------------------------------------TTHHHHHHHHHHTTCEEEEEE
T ss_pred HHcCCCEEEECCCCcc-------------------------------------------cHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999877 55 677888899999999999
Q ss_pred CCCCCHHhHHHHHh---hcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---
Q psy11600 163 KPKTPVDVIAEYIE---SADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF--- 236 (277)
Q Consensus 163 ~p~t~~~~i~~~i~---~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~--- 236 (277)
+|.|+++.+.++++ .+|++++|+++|||+||+|.+..+++++++++..+++.++++|||+.+|+.++.++|++.
T Consensus 121 ~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aGaD~vvv 200 (228)
T 1h1y_A 121 RPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVA 200 (228)
T ss_dssp CTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEE
T ss_pred eCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcCCCEEEE
Confidence 99999999999999 899999999999999999999999999999998878899999999999999999999996
Q ss_pred CCcccc-cCHHHHHHHHHh
Q psy11600 237 GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 237 ggq~F~-~~~~~kI~~l~~ 254 (277)
|+..|. ++..+.++++++
T Consensus 201 Gsai~~~~d~~~~~~~l~~ 219 (228)
T 1h1y_A 201 GSSIFGAAEPGEVISALRK 219 (228)
T ss_dssp SHHHHTSSCHHHHHHHHHH
T ss_pred CHHHHCCCCHHHHHHHHHH
Confidence 778887 477788888875
No 8
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=100.00 E-value=1.1e-31 Score=236.40 Aligned_cols=210 Identities=35% Similarity=0.607 Sum_probs=188.2
Q ss_pred CCCCceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHH
Q psy11600 2 SHVQCMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIE 81 (277)
Q Consensus 2 ~~~~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~ 81 (277)
|.-+++|.|||+++|+.++.+.++.+.+.|+|++|+|+|||+|+||+++|++.++++|+. ++.++++|+|+.+|.++++
T Consensus 7 ~~~~~~i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~-~~~~~~v~l~vnd~~~~v~ 85 (230)
T 1rpx_A 7 SKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI-TDLPLDVHLMIVEPDQRVP 85 (230)
T ss_dssp CTTSCEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGG-CCSCEEEEEESSSHHHHHH
T ss_pred CCCceEEEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhc-cCCcEEEEEEecCHHHHHH
Confidence 334457999999999999999999999999999999999999999999999999999986 5789999999999999999
Q ss_pred HHHhcCCCeEEEecc--CCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccc
Q psy11600 82 PMADANVDQYTFHVE--PVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG 159 (277)
Q Consensus 82 ~l~~ag~d~i~~H~e--~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g 159 (277)
.+.++|+|.+++|.+ ..+ ......+.+++.|++.+
T Consensus 86 ~~~~~Gad~v~vh~~~~~~~-------------------------------------------~~~~~~~~~~~~g~~ig 122 (230)
T 1rpx_A 86 DFIKAGADIVSVHCEQSSTI-------------------------------------------HLHRTINQIKSLGAKAG 122 (230)
T ss_dssp HHHHTTCSEEEEECSTTTCS-------------------------------------------CHHHHHHHHHHTTSEEE
T ss_pred HHHHcCCCEEEEEecCccch-------------------------------------------hHHHHHHHHHHcCCcEE
Confidence 999999999999988 655 55677788888898999
Q ss_pred eeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC----CccEEEeCCCCcCcHHHHHHccCC
Q psy11600 160 LAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGGVGPNTIDECAKCLTG 235 (277)
Q Consensus 160 ~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~----~~~i~vdGgV~~~tv~~~~~~gpg 235 (277)
+.++|+|+.+.+..+...+|++++|++.||++||.|....+++++++++..+ ++.+.++|||+.+|+.++.++|++
T Consensus 123 ~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad 202 (230)
T 1rpx_A 123 VVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGAN 202 (230)
T ss_dssp EEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCC
T ss_pred EEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCC
Confidence 9999999999888888889999999999999999999989999988887654 678999999999999999999999
Q ss_pred C---CCccccc-CHHHHHHHHHhh
Q psy11600 236 F---GGQKFMQ-DMMPKVKWLREN 255 (277)
Q Consensus 236 ~---ggq~F~~-~~~~kI~~l~~~ 255 (277)
. |+..|.. +..+.++++++.
T Consensus 203 ~vvvgSaI~~a~dp~~a~~~l~~~ 226 (230)
T 1rpx_A 203 ALVAGSAVFGAPDYAEAIKGIKTS 226 (230)
T ss_dssp EEEESHHHHTSSCHHHHHHHHHTC
T ss_pred EEEEChhhhCCCCHHHHHHHHHHH
Confidence 6 8888874 777888888753
No 9
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.97 E-value=5.5e-31 Score=229.78 Aligned_cols=205 Identities=40% Similarity=0.712 Sum_probs=184.2
Q ss_pred ceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHh
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMAD 85 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ 85 (277)
++|+|||+|+|+.++.++++.+++.|+|++|+|+|||+|.+++++|++.++++|+. ++.++++|+|+.|+.++++.+.+
T Consensus 4 ~~~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~-~~~~~~v~l~v~d~~~~i~~~~~ 82 (220)
T 2fli_A 4 LKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH-SKLVFDCHLMVVDPERYVEAFAQ 82 (220)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT-CCSEEEEEEESSSGGGGHHHHHH
T ss_pred cEEEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh-CCCCEEEEEeecCHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999985 68899999999999999999999
Q ss_pred cCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCC
Q psy11600 86 ANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPK 165 (277)
Q Consensus 86 ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~ 165 (277)
+|+|++++|.+..+ ......+.+++.|.+.+++++|.
T Consensus 83 ~gad~v~vh~~~~~-------------------------------------------~~~~~~~~~~~~g~~i~~~~~~~ 119 (220)
T 2fli_A 83 AGADIMTIHTESTR-------------------------------------------HIHGALQKIKAAGMKAGVVINPG 119 (220)
T ss_dssp HTCSEEEEEGGGCS-------------------------------------------CHHHHHHHHHHTTSEEEEEECTT
T ss_pred cCCCEEEEccCccc-------------------------------------------cHHHHHHHHHHcCCcEEEEEcCC
Confidence 99999999988765 56677788888888899999999
Q ss_pred CCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC----CccEEEeCCCCcCcHHHHHHccCCC---CC
Q psy11600 166 TPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGGVGPNTIDECAKCLTGF---GG 238 (277)
Q Consensus 166 t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~----~~~i~vdGgV~~~tv~~~~~~gpg~---gg 238 (277)
|+.+.+..+...+|+++.|+++||++||.|.+..+++++++++... ++.+.++|||+.+|+.++.++|++. |+
T Consensus 120 t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~Gad~vvvGs 199 (220)
T 2fli_A 120 TPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGS 199 (220)
T ss_dssp SCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEEESH
T ss_pred CCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcCCCEEEECh
Confidence 9999888888889999999999999999998888888888887553 6789999999999999999999996 77
Q ss_pred ccccc-CHHHHHHHHHh
Q psy11600 239 QKFMQ-DMMPKVKWLRE 254 (277)
Q Consensus 239 q~F~~-~~~~kI~~l~~ 254 (277)
..|.. +..+.++++++
T Consensus 200 ai~~~~d~~~a~~~~~~ 216 (220)
T 2fli_A 200 YLFKASDLVSQVQTLRT 216 (220)
T ss_dssp HHHTSSCHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHH
Confidence 77764 67777777765
No 10
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.95 E-value=2.9e-28 Score=217.80 Aligned_cols=165 Identities=25% Similarity=0.377 Sum_probs=135.8
Q ss_pred CeeeeeeeccCc---HHhHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhC-CCcccc------hhhhhHHH
Q psy11600 65 AFFETHMMVQNP---QQWIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAG-MKVGQV------LQDWIEPM 126 (277)
Q Consensus 65 ~~~d~Hlmv~~p---~~~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~-~~~~d~------p~~~i~~~ 126 (277)
..+...++..|. +++++.+.++|+||+ |+|+||| |+++++++|+.+ +.++|+ |++|++.|
T Consensus 28 ~~i~pSilsaD~~~L~~~i~~l~~~G~d~l--HvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~ 105 (246)
T 3inp_A 28 IQINPSILSADLARLGDDVKAVLAAGADNI--HFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESF 105 (246)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCCE--EEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHH
T ss_pred CeeehhhhcCChhhHHHHHHHHHHcCCCEE--EEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHH
Confidence 568888998875 678999999999999 9999987 999999999998 777765 89999999
Q ss_pred HhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHH
Q psy11600 127 ADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWL 206 (277)
Q Consensus 127 ~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l 206 (277)
+++|||++|||.| +..++.+.+++ +++.++..++++||+|+. +.+
T Consensus 106 ~~aGAd~itvH~E---a~~~~~~~i~~---------------------ir~~G~k~Gvalnp~Tp~-----------e~l 150 (246)
T 3inp_A 106 AKAGATSIVFHPE---ASEHIDRSLQL---------------------IKSFGIQAGLALNPATGI-----------DCL 150 (246)
T ss_dssp HHHTCSEEEECGG---GCSCHHHHHHH---------------------HHTTTSEEEEEECTTCCS-----------GGG
T ss_pred HHcCCCEEEEccc---cchhHHHHHHH---------------------HHHcCCeEEEEecCCCCH-----------HHH
Confidence 9999999999999 88777777765 456677788999999985 233
Q ss_pred HhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhh----CCCCeEEEeCCCCccCHHHhhC
Q psy11600 207 RENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLREN----YPTLNIEVDGGVGPNTIDECAK 277 (277)
Q Consensus 207 ~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~----~~~~~I~VDGGI~~~~~~~~~~ 277 (277)
+++.+.+|+++.|+| +||||||.|++.+++||+++|++ .+++.|+||||||++|++++++
T Consensus 151 ~~~l~~vD~VlvMsV-----------~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~ 214 (246)
T 3inp_A 151 KYVESNIDRVLIMSV-----------NPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAV 214 (246)
T ss_dssp TTTGGGCSEEEEECS-----------CTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHT
T ss_pred HHHHhcCCEEEEeee-----------cCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHH
Confidence 333445677765555 49999999999999999999975 3568999999999999998864
No 11
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.94 E-value=2.5e-27 Score=210.08 Aligned_cols=161 Identities=25% Similarity=0.335 Sum_probs=130.2
Q ss_pred eeeeeeccC---cHHhHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhCCCcccc------hhhhhHHHHhc
Q psy11600 67 FETHMMVQN---PQQWIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAGMKVGQV------LQDWIEPMADA 129 (277)
Q Consensus 67 ~d~Hlmv~~---p~~~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~ 129 (277)
+...++..| ++++++.+ ++|+||+ |+|+||| |+.+++++|+.++.++|+ |++|++.|+++
T Consensus 3 i~pSila~D~~~l~~~i~~~-~~gad~l--HvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~a 79 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFI-DSHADYF--HIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARA 79 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHH-HTTCSCE--EEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHH
T ss_pred EEeehhhCChhhHHHHHHHH-HcCCCEE--EEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHc
Confidence 344555555 56678888 9999999 9999887 899999999998777665 99999999999
Q ss_pred CCCeEEeecCCCCC-hHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHh
Q psy11600 130 NVDQYTFHVEPVDN-VPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRE 208 (277)
Q Consensus 130 g~d~it~H~E~~~~-~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~ 208 (277)
|||++|||.| + ..++.+.++ .+++.++..++++||+|+. +.+++
T Consensus 80 GAd~itvh~E---a~~~~~~~~i~---------------------~i~~~G~k~gv~lnp~tp~-----------~~~~~ 124 (231)
T 3ctl_A 80 GADFITLHPE---TINGQAFRLID---------------------EIRRHDMKVGLILNPETPV-----------EAMKY 124 (231)
T ss_dssp TCSEEEECGG---GCTTTHHHHHH---------------------HHHHTTCEEEEEECTTCCG-----------GGGTT
T ss_pred CCCEEEECcc---cCCccHHHHHH---------------------HHHHcCCeEEEEEECCCcH-----------HHHHH
Confidence 9999999999 7 666666555 4567788888999999983 23333
Q ss_pred hCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhC----CCCeEEEeCCCCccCHHHhh
Q psy11600 209 NYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENY----PTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 209 ~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~----~~~~I~VDGGI~~~~~~~~~ 276 (277)
+.+.+|+.+.|+| +||||||.|.+.+++||+++|++. .++.|+||||||.+|+++++
T Consensus 125 ~l~~~D~VlvmsV-----------~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~ 185 (231)
T 3ctl_A 125 YIHKADKITVMTV-----------DPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLM 185 (231)
T ss_dssp TGGGCSEEEEESS-----------CTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHH
T ss_pred HHhcCCEEEEeee-----------ccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHH
Confidence 3445677664444 499999999999999999999864 36889999999999998875
No 12
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.94 E-value=9.7e-27 Score=205.93 Aligned_cols=164 Identities=34% Similarity=0.617 Sum_probs=134.7
Q ss_pred CeeeeeeeccCc---HHhHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhh--CCCcccc------hhhhhHH
Q psy11600 65 AFFETHMMVQNP---QQWIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEA--GMKVGQV------LQDWIEP 125 (277)
Q Consensus 65 ~~~d~Hlmv~~p---~~~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~--~~~~~d~------p~~~i~~ 125 (277)
..+...++..|. +++++.+.++|+||+ |+|+||| |+.+++++|+. +..++|+ |.+|++.
T Consensus 5 ~~i~psil~~D~~~l~~~i~~l~~~g~d~~--h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~ 82 (228)
T 3ovp_A 5 CKIGPSILNSDLANLGAECLRMLDSGADYL--HLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKP 82 (228)
T ss_dssp CEEEEBCTTSCGGGHHHHHHHHHHTTCSCE--EEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHH
T ss_pred cEeeeeheeCCchhHHHHHHHHHHcCCCEE--EEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHH
Confidence 456677777764 678999999999999 8888886 99999999999 4667664 9999999
Q ss_pred HHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHH
Q psy11600 126 MADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKW 205 (277)
Q Consensus 126 ~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~ 205 (277)
++++|||+||||.| +..++.+.+++ ++..++.++++++|+|+. +.
T Consensus 83 ~~~aGad~itvH~E---a~~~~~~~i~~---------------------i~~~G~k~gval~p~t~~-----------e~ 127 (228)
T 3ovp_A 83 MAVAGANQYTFHLE---ATENPGALIKD---------------------IRENGMKVGLAIKPGTSV-----------EY 127 (228)
T ss_dssp HHHHTCSEEEEEGG---GCSCHHHHHHH---------------------HHHTTCEEEEEECTTSCG-----------GG
T ss_pred HHHcCCCEEEEccC---CchhHHHHHHH---------------------HHHcCCCEEEEEcCCCCH-----------HH
Confidence 99999999999999 87777777765 456677788999999984 22
Q ss_pred HHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 206 LRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 206 l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
+.++.+.+|..+. ||+ +||||||.|.+.+++||+++|++.+++.|+||||||++|+++++
T Consensus 128 l~~~l~~~D~Vl~-----msv------~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~ 187 (228)
T 3ovp_A 128 LAPWANQIDMALV-----MTV------EPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCA 187 (228)
T ss_dssp TGGGGGGCSEEEE-----ESS------CTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCSTTTHHHHH
T ss_pred HHHHhccCCeEEE-----eee------cCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHH
Confidence 2233334566654 444 49999999999999999999999888999999999999999875
No 13
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=99.94 E-value=1.3e-27 Score=208.14 Aligned_cols=192 Identities=12% Similarity=0.097 Sum_probs=166.6
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhc-CCCCeeeeeee--ccCcHHhHHHHHhc
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNK-IPKAFFETHMM--VQNPQQWIEPMADA 86 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~-~~~~~~d~Hlm--v~~p~~~i~~l~~a 86 (277)
+.++|+|+.+++++++.+++.|.+++|+|||||.| ++||++.+++||+. -+.+++|+|+| ..+|.+|++.+.++
T Consensus 1 ~lila~D~~~l~~~~~~~~~~~~~~~~~kv~~~~f---~~~G~~~i~~lr~~~~~~v~~D~kl~DI~~t~~~~v~~~~~~ 77 (208)
T 2czd_A 1 MIVLALDVYEGERAIKIAKSVKDYISMIKVNWPLI---LGSGVDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGA 77 (208)
T ss_dssp CEEEECCCCSHHHHHHHHHHHGGGCSEEEEEHHHH---HHHCTTHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHT
T ss_pred CeEEEecCCCHHHHHHHHHHhcccccEEEecHHHH---HhhCHHHHHHHHHcCCCEEEEEeeeCchHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999999 78999999999986 37899999999 99999999999999
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCC
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKT 166 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t 166 (277)
|+|++|+|.+... +.++.+++.+ |+.++|.|
T Consensus 78 Gad~vtvh~~~g~----------------------------------------------~~i~~~~~~~---gv~vl~~t 108 (208)
T 2czd_A 78 GADYVIVHTFVGR----------------------------------------------DSVMAVKELG---EIIMVVEM 108 (208)
T ss_dssp TCSEEEEESTTCH----------------------------------------------HHHHHHHTTS---EEEEECCC
T ss_pred CCCEEEEeccCCH----------------------------------------------HHHHHHHHhC---CcEEEEec
Confidence 9999999987533 3355566654 99999999
Q ss_pred CHHhHHHH-HhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCC-ccEEEeCCCCcC--cHHHHHHccCCC---CCc
Q psy11600 167 PVDVIAEY-IESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPT-LNIEVDGGVGPN--TIDECAKCLTGF---GGQ 239 (277)
Q Consensus 167 ~~~~i~~~-i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~-~~i~vdGgV~~~--tv~~~~~~gpg~---ggq 239 (277)
|.+.+.++ .+.++.++.|+++||+.||.|.+...++++.+++..+. +.+ +||||+.. ++.++.++|+++ |+.
T Consensus 109 ~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~~~~i~~lr~~~~~~~~i-v~gGI~~~g~~~~~~~~aGad~vvvGr~ 187 (208)
T 2czd_A 109 SHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRPERIGYIRDRLKEGIKI-LAPGIGAQGGKAKDAVKAGADYIIVGRA 187 (208)
T ss_dssp CSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSSTHHHHHHHHHSCTTCEE-EECCCCSSTTHHHHHHHHTCSEEEECHH
T ss_pred CCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHHHHHhCCCCeEE-EECCCCCCCCCHHHHHHcCCCEEEEChH
Confidence 99877666 77888899999999999999999999999999988764 544 99999998 899999999996 777
Q ss_pred ccc-cCHHHHHHHHHh
Q psy11600 240 KFM-QDMMPKVKWLRE 254 (277)
Q Consensus 240 ~F~-~~~~~kI~~l~~ 254 (277)
.|. ++..+.++++++
T Consensus 188 I~~a~dp~~~~~~l~~ 203 (208)
T 2czd_A 188 IYNAPNPREAAKAIYD 203 (208)
T ss_dssp HHTSSSHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHH
Confidence 777 467777777765
No 14
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=99.93 E-value=4.8e-26 Score=201.34 Aligned_cols=165 Identities=29% Similarity=0.406 Sum_probs=134.0
Q ss_pred CeeeeeeeccC---cHHhHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhC-CCcccc------hhhhhHHH
Q psy11600 65 AFFETHMMVQN---PQQWIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAG-MKVGQV------LQDWIEPM 126 (277)
Q Consensus 65 ~~~d~Hlmv~~---p~~~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~-~~~~d~------p~~~i~~~ 126 (277)
..+...++..| ++++++.+.++|+||+ |+|+||| |+.+++++|+.+ +.++|+ |.+|++.|
T Consensus 6 ~~i~pSila~D~~~l~~~i~~~~~~g~d~i--HvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~ 83 (227)
T 1tqx_A 6 AIIAPSVLASNISKLAEETQRMESLGAEWI--HLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLL 83 (227)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCSEE--EEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGC
T ss_pred CeEEeehhcCChhhHHHHHHHHHHcCCCEE--EEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHH
Confidence 34667777776 4567888889999999 9998886 899999999998 677665 99999999
Q ss_pred HhcCCCeEEeecCCCCChH-HHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHH
Q psy11600 127 ADANVDQYTFHVEPVDNVP-QVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKW 205 (277)
Q Consensus 127 ~~~g~d~it~H~E~~~~~~-~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~ 205 (277)
++ ||++|||.| +.. ++.+.++.+ ..++..++..++++||+|+. +.
T Consensus 84 ~~--Ad~itvH~e---a~~~~~~~~i~~~------------------~~i~~~G~k~gvalnp~tp~-----------~~ 129 (227)
T 1tqx_A 84 KT--SNQLTFHFE---ALNEDTERCIQLA------------------KEIRDNNLWCGISIKPKTDV-----------QK 129 (227)
T ss_dssp TT--SSEEEEEGG---GGTTCHHHHHHHH------------------HHHHTTTCEEEEEECTTSCG-----------GG
T ss_pred Hh--CCEEEEeec---CCccCHHHHHHHH------------------HHHHHcCCeEEEEeCCCCcH-----------HH
Confidence 99 999999999 765 677666610 03566777788999999983 23
Q ss_pred HHhhCC--CccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 206 LRENYP--TLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 206 l~~~~~--~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
++++.+ .+|+.+.|+|+ ||||||.|.+.+++||+++|++.+++.|+||||||.+|+++++
T Consensus 130 ~~~~l~~g~~D~VlvmsV~-----------pGf~gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~ 191 (227)
T 1tqx_A 130 LVPILDTNLINTVLVMTVE-----------PGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISA 191 (227)
T ss_dssp GHHHHTTTCCSEEEEESSC-----------TTCSSCCCCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHH
T ss_pred HHHHhhcCCcCEEEEeeec-----------cCCCCcccchHHHHHHHHHHHhccCCeEEEECCCCHHHHHHHH
Confidence 344445 57888755554 9999999999999999999998878899999999999998875
No 15
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=99.90 E-value=6.5e-25 Score=195.21 Aligned_cols=162 Identities=10% Similarity=0.069 Sum_probs=131.0
Q ss_pred eeeeeeccCc---HHhHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhCCC-ccc---chhhhhHHHHhcCC
Q psy11600 67 FETHMMVQNP---QQWIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAGMK-VGQ---VLQDWIEPMADANV 131 (277)
Q Consensus 67 ~d~Hlmv~~p---~~~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~~~-~~d---~p~~~i~~~~~~g~ 131 (277)
+...++..|+ .++++.+.++|+||+ |+|+||| |+.+++++|+.+.. .|. .|++|++.++++||
T Consensus 16 i~psila~D~~~l~~~i~~~~~~gad~l--hvDvmDG~fvpn~t~G~~~v~~lr~~~~~DvhLMv~~p~~~i~~~~~aGA 93 (237)
T 3cu2_A 16 LSVGILSANWLQLNEEVTTLLENQINVL--HFDIADGQFSSLFTVGAIGIKYFPTHCFKDVHLMVRNQLEVAKAVVANGA 93 (237)
T ss_dssp EEEEGGGSCGGGHHHHHHHHHHTTCCEE--EEEEEBSSSSSCBCBCTHHHHTSCTTSEEEEEEECSCHHHHHHHHHHTTC
T ss_pred EEEeeeeCCcccHHHHHHHHHHcCCCEE--EEEEecCccccchhhhHHHHHHHhhhCCCCeEEEEECHHHHHHHHHHcCC
Confidence 6778888775 456888888999999 8998886 78999999998854 222 29999999999999
Q ss_pred CeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhc---------CceEEEEecCCCCCchhhhhhhhh
Q psy11600 132 DQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESA---------DLVLIMTVEPGFGGQKFMQDMMPK 202 (277)
Q Consensus 132 d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~---------d~vl~mav~Pgt~gq~~~~~~l~k 202 (277)
|++|||.| +..++.+.++++ +.. ++..++++||+|+.
T Consensus 94 d~itvH~e---a~~~~~~~i~~i---------------------~~~~~~~~~~~~g~~~gv~l~p~Tp~---------- 139 (237)
T 3cu2_A 94 NLVTLQLE---QYHDFALTIEWL---------------------AKQKTTYANQVYPVLIGACLCPETPI---------- 139 (237)
T ss_dssp SEEEEETT---CTTSHHHHHHHH---------------------TTCEEEETTEEEECEEEEEECTTSCG----------
T ss_pred CEEEEecC---CcccHHHHHHHH---------------------HhcccccccccCCceEEEEEeCCChH----------
Confidence 99999999 988877777764 344 56677899999983
Q ss_pred HHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCC----CCeEEEeCCCCccCHHHhh
Q psy11600 203 VKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 203 I~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~----~~~I~VDGGI~~~~~~~~~ 276 (277)
+.+.++.+.+|+.+ +||+ +||||||.|.+.+++||+++|++.. ++.|+||||||.+|+++++
T Consensus 140 -~~l~~~l~~~D~vl-----vMsv------~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~ 205 (237)
T 3cu2_A 140 -SELEPYLDQIDVIQ-----LLTL------DPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFK 205 (237)
T ss_dssp -GGGTTTTTTCSEEE-----EESE------ETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHH
T ss_pred -HHHHHHhhcCceee-----eeee------ccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHH
Confidence 34444555677765 4554 6999999999999999999998653 5889999999999998875
No 16
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=99.90 E-value=1.6e-24 Score=189.44 Aligned_cols=192 Identities=10% Similarity=0.006 Sum_probs=150.8
Q ss_pred eeeccccCcccHHHHHHHHHHcCCCEEE-EeccccccccCCCCCHHHHHHHHhcC--CCCeeeeeeeccCcHHhHHHHHh
Q psy11600 9 GPSILNSDLSNLHSESQNLLDSGADYLH-LDVMDGTFVPNLTFGHPVVKCLRNKI--PKAFFETHMMVQNPQQWIEPMAD 85 (277)
Q Consensus 9 ~~s~~~~d~~~l~~~~~~l~~~~~~~~h-~DimDg~fvp~~~~g~~~v~~l~~~~--~~~~~d~Hlmv~~p~~~i~~l~~ 85 (277)
++|++|+|+.+++++++.+++.+ +++| +||||+.| ++||++.|++||+.+ +++++|+|+|. .|..+++.+.+
T Consensus 4 ~~~ilalD~~~~~~~~~~~~~~~-~~v~~~kv~~~~f---~~~G~~~i~~l~~~~p~~~v~lD~kl~d-ip~t~~~~~~~ 78 (216)
T 1q6o_A 4 PMLQVALDNQTMDSAYETTRLIA-EEVDIIEVGTILC---VGEGVRAVRDLKALYPHKIVLADAKIAD-AGKILSRMCFE 78 (216)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHG-GGCSEEEECHHHH---HHHCTHHHHHHHHHCTTSEEEEEEEECS-CHHHHHHHHHH
T ss_pred CCeEEEECCCCHHHHHHHHHHhc-ccCCEEEECHHHH---HHhCHHHHHHHHHhCCCCeEEEEEEecc-cHHHHHHHHHh
Confidence 57999999999999999999886 4444 89999999 689999999999975 46889999995 89999999999
Q ss_pred cCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeC-C
Q psy11600 86 ANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIK-P 164 (277)
Q Consensus 86 ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~-p 164 (277)
+|+|++|+|.+... . ++....+.+++.|.+.++-+. +
T Consensus 79 ~Gad~itvh~~~g~---~---------------------------------------~l~~~~~~~~~~g~~~~~~ll~~ 116 (216)
T 1q6o_A 79 ANADWVTVICCADI---N---------------------------------------TAKGALDVAKEFNGDVQIELTGY 116 (216)
T ss_dssp TTCSEEEEETTSCH---H---------------------------------------HHHHHHHHHHHTTCEEEEEECSC
T ss_pred CCCCEEEEeccCCH---H---------------------------------------HHHHHHHHHHHcCCCceeeeeeC
Confidence 99999999988653 1 244566677777777666333 3
Q ss_pred --CCCHHhHHHHHhhcCceE---EEEecCCCCCchhhhhhhhhHHHHHhhCC-CccEEEeCCCCcCcHHHHHHccCCC--
Q psy11600 165 --KTPVDVIAEYIESADLVL---IMTVEPGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVGPNTIDECAKCLTGF-- 236 (277)
Q Consensus 165 --~t~~~~i~~~i~~~d~vl---~mav~Pgt~gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV~~~tv~~~~~~gpg~-- 236 (277)
.++.+.+.++ ...++++ .|+++||+.| ..++++.+++..+ ++.+.++|||+..|+.++.++|+++
T Consensus 117 ~t~~~~~~l~~~-~~~~~vl~~a~~~~~~G~~g------~~~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~~aGad~iv 189 (216)
T 1q6o_A 117 WTWEQAQQWRDA-GIGQVVYHRSRDAQAAGVAW------GEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFI 189 (216)
T ss_dssp CCHHHHHHHHHT-TCCEEEEECCHHHHHTTCCC------CHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSCCSEEE
T ss_pred CChhhHHHHHhc-CcHHHHHHHHHHHHhcCCCC------CHHHHHHHHHhcCCCCcEEEECCcChhhHHHHHHcCCCEEE
Confidence 4455544443 3456777 7788999987 3456777766543 6779999999999999999999996
Q ss_pred -CCccccc-CHHHHHHHHHh
Q psy11600 237 -GGQKFMQ-DMMPKVKWLRE 254 (277)
Q Consensus 237 -ggq~F~~-~~~~kI~~l~~ 254 (277)
|+..|.. +..+.++++++
T Consensus 190 vG~~I~~a~dp~~~~~~~~~ 209 (216)
T 1q6o_A 190 AGRSIRDAASPVEAARQFKR 209 (216)
T ss_dssp ESHHHHTSSCHHHHHHHHHH
T ss_pred EeehhcCCCCHHHHHHHHHH
Confidence 7788874 66677777765
No 17
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=99.89 E-value=1.6e-24 Score=193.49 Aligned_cols=197 Identities=13% Similarity=0.133 Sum_probs=160.9
Q ss_pred EeeeccccCcccHHHHHHHHHHcC--CCE--EEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHH---hH
Q psy11600 8 IGPSILNSDLSNLHSESQNLLDSG--ADY--LHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQ---WI 80 (277)
Q Consensus 8 ~~~s~~~~d~~~l~~~~~~l~~~~--~~~--~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~---~i 80 (277)
=+||++++|+.+++++++.+++.| ++| +|+|++ ++||++.+++||+..+.+++|+|+| ..|.. ++
T Consensus 14 ~~~~ilalD~~~l~~~~~~~~~~~~~v~~~Kv~~d~~-------~~~G~~~v~~lr~~~~~v~lD~kl~-Dip~t~~~~i 85 (245)
T 1eix_A 14 NSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMF-------TLFGPQFVRELQQRGFDIFLDLKFH-DIPNTAAHAV 85 (245)
T ss_dssp CCCEEEEECCSSHHHHHHHHTTSCTTTCEEEEEHHHH-------HHHHHHHHHHHHHTTCCEEEEEEEC-SCHHHHHHHH
T ss_pred CCCeEEEECCCCHHHHHHHHHHhCccCcEEEEcHHHH-------HHhCHHHHHHHHHCCCcEEEEeecc-ccHHHHHHHH
Confidence 479999999999999999999998 899 999996 6899999999998546899999999 77774 88
Q ss_pred HHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCC-cc-
Q psy11600 81 EPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGM-KV- 158 (277)
Q Consensus 81 ~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~-~~- 158 (277)
+.+.++|+|++|||.+... . .+...++.+++.|+ +.
T Consensus 86 ~~~~~~Gad~vTvH~~~g~---~---------------------------------------~l~~~~~~~~~~G~~~~~ 123 (245)
T 1eix_A 86 AAAADLGVWMVNVHASGGA---R---------------------------------------MMTAAREALVPFGKDAPL 123 (245)
T ss_dssp HHHHHHTCSEEEEBGGGCH---H---------------------------------------HHHHHHHTTGGGGGGCCE
T ss_pred HHHHhCCCCEEEEeccCCH---H---------------------------------------HHHHHHHHHHHcCCCCCc
Confidence 8999999999999998743 1 13455556666665 44
Q ss_pred ceeeCCCCCH--HhHHHH---HhhcCceEEEEe-cCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcC--------
Q psy11600 159 GLAIKPKTPV--DVIAEY---IESADLVLIMTV-EPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPN-------- 224 (277)
Q Consensus 159 g~~i~p~t~~--~~i~~~---i~~~d~vl~mav-~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~-------- 224 (277)
.+++.+.|+. +.+.++ ++..|.++.|++ +|+++++.|+...++ ++++++..+...+.|||||+..
T Consensus 124 ~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~~e-i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~ 202 (245)
T 1eix_A 124 LIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQE-AVRFKQVFGQEFKLVTPGIRPQGSEAGDQR 202 (245)
T ss_dssp EEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCGGG-HHHHHHHHCSSSEEEECCBCCTTCCCTTCC
T ss_pred EEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCHHH-HHHHHHhcCCCCEEEECCcCCCCCCccchh
Confidence 5577766665 666655 356688888887 788888889999888 9999887766679999999999
Q ss_pred ---cHHHHHHccCCC---CCccccc-CHHHHHHHHHhh
Q psy11600 225 ---TIDECAKCLTGF---GGQKFMQ-DMMPKVKWLREN 255 (277)
Q Consensus 225 ---tv~~~~~~gpg~---ggq~F~~-~~~~kI~~l~~~ 255 (277)
|..++.++|+++ |+..|.. +..+.++++++.
T Consensus 203 rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~ 240 (245)
T 1eix_A 203 RIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINAS 240 (245)
T ss_dssp SCBCHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHH
T ss_pred ccCCHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHH
Confidence 999999999997 7788874 777888888763
No 18
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.89 E-value=8.5e-24 Score=185.19 Aligned_cols=194 Identities=14% Similarity=0.136 Sum_probs=160.3
Q ss_pred eccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCC--CeeeeeeeccCcHHhHHHHHhcCC
Q psy11600 11 SILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPK--AFFETHMMVQNPQQWIEPMADANV 88 (277)
Q Consensus 11 s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~--~~~d~Hlmv~~p~~~i~~l~~ag~ 88 (277)
=++|+|+.+++++++.+++.+ + |+|+||..|++|+++|++.|+++|+.+|+ +++|+|+| ..|..+++.+.++|+
T Consensus 9 lilalD~~~~~~~~~~~~~~~-~--~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~-d~p~~~~~~~~~aGa 84 (218)
T 3jr2_A 9 IQIALDQTNLTDAVAVASNVA-S--YVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTT-DGGAILSRMAFEAGA 84 (218)
T ss_dssp EEEEECCSSHHHHHHHHHHHG-G--GCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHHHHHTC
T ss_pred eEEEeCCCCHHHHHHHHHHhc-C--CceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeec-ccHHHHHHHHHhcCC
Confidence 489999999999999999852 3 79999999999999999999999998665 67799999 689999999999999
Q ss_pred CeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccce-eeCCCCC
Q psy11600 89 DQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGL-AIKPKTP 167 (277)
Q Consensus 89 d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~-~i~p~t~ 167 (277)
|++++|.+.... ...+..+.+++.|++.++ .++|.|+
T Consensus 85 d~i~vh~~~~~~------------------------------------------~~~~~~~~~~~~g~~~~~d~l~~~T~ 122 (218)
T 3jr2_A 85 DWITVSAAAHIA------------------------------------------TIAACKKVADELNGEIQIEIYGNWTM 122 (218)
T ss_dssp SEEEEETTSCHH------------------------------------------HHHHHHHHHHHHTCEEEEECCSSCCH
T ss_pred CEEEEecCCCHH------------------------------------------HHHHHHHHHHHhCCccceeeeecCCH
Confidence 999999876430 245677778888888887 7888886
Q ss_pred HHhHHHHHh-hcCce-EEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---CCcccc
Q psy11600 168 VDVIAEYIE-SADLV-LIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF---GGQKFM 242 (277)
Q Consensus 168 ~~~i~~~i~-~~d~v-l~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~---ggq~F~ 242 (277)
+...++.+ .+|++ +.|+++|++.||.|.++.+++|++++. +++.++++|||+.+|+.++.++|++. |+..|.
T Consensus 123 -~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~--~~~pi~v~GGI~~~~~~~~~~aGAd~vvvGsaI~~ 199 (218)
T 3jr2_A 123 -QDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSA--LGIELSITGGIVPEDIYLFEGIKTKTFIAGRALAG 199 (218)
T ss_dssp -HHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHH--TTCEEEEESSCCGGGGGGGTTSCEEEEEESGGGSH
T ss_pred -HHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhC--CCCCEEEECCCCHHHHHHHHHcCCCEEEEchhhcC
Confidence 56666654 57865 458889999899999999999988875 46789999999999999999999986 888887
Q ss_pred c-CHHHHHHHHHh
Q psy11600 243 Q-DMMPKVKWLRE 254 (277)
Q Consensus 243 ~-~~~~kI~~l~~ 254 (277)
. +..+.+ ++++
T Consensus 200 a~dp~~a~-~l~~ 211 (218)
T 3jr2_A 200 AEGQQTAA-ALRE 211 (218)
T ss_dssp HHHHHHHH-HHHH
T ss_pred CCCHHHHH-HHHH
Confidence 3 555556 6654
No 19
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=99.88 E-value=9.3e-24 Score=188.53 Aligned_cols=196 Identities=13% Similarity=0.159 Sum_probs=161.4
Q ss_pred eeeccccCcccHHHHHHHHHHcC--CCE--EEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHH---hHH
Q psy11600 9 GPSILNSDLSNLHSESQNLLDSG--ADY--LHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQ---WIE 81 (277)
Q Consensus 9 ~~s~~~~d~~~l~~~~~~l~~~~--~~~--~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~---~i~ 81 (277)
+|||+|+|+.+++++++.+++.| ++| +|+|+| ++||++.|++||+..+.+++|+|+| ..|.. +++
T Consensus 5 ~~lilalD~~~l~~~~~~v~~~~~~v~~~Kv~~d~~-------~~~G~~~v~~lr~~~~~v~lD~kl~-Dip~t~~~~~~ 76 (246)
T 2yyu_A 5 TPFIVALDFPSKQEVERFLRPFAGTPLFVKVGMELY-------YQEGPAIVAFLKEQGHAVFLDLKLH-DIPNTVKQAMK 76 (246)
T ss_dssp CCEEEECCCSSHHHHHHHHGGGTTSCCEEEECHHHH-------HHHTHHHHHHHHHTTCEEEEEEEEC-SCHHHHHHHHH
T ss_pred CCeEEEeCCCCHHHHHHHHHHhcccccEEEeCHHHH-------HHhCHHHHHHHHHCCCeEEEEeecc-cchHHHHHHHH
Confidence 58999999999999999999888 599 999996 6899999999998546899999999 77877 899
Q ss_pred HHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHH---hCCcc
Q psy11600 82 PMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKE---AGMKV 158 (277)
Q Consensus 82 ~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~---~g~~~ 158 (277)
.+.++|+|++|||.+... . .+...++.+++ .|++.
T Consensus 77 ~~~~~Gad~vTvH~~~g~---~---------------------------------------~l~~~~~~~~~~~~~G~~~ 114 (246)
T 2yyu_A 77 GLARVGADLVNVHAAGGR---R---------------------------------------MMEAAIEGLDAGTPSGRMR 114 (246)
T ss_dssp HHHHTTCSEEEEEGGGCH---H---------------------------------------HHHHHHHHHHHHSCSSSCC
T ss_pred HHHhcCCCEEEEECCCCH---H---------------------------------------HHHHHHHHHHhhcccCCcC
Confidence 999999999999998754 1 23566677777 67653
Q ss_pred --ceeeCCCCCH--HhH-HHH---HhhcCceEEEEec-CCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcC-----
Q psy11600 159 --GLAIKPKTPV--DVI-AEY---IESADLVLIMTVE-PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPN----- 224 (277)
Q Consensus 159 --g~~i~p~t~~--~~i-~~~---i~~~d~vl~mav~-Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~----- 224 (277)
.++++|.|+. +.+ .++ ++..|.++.|+++ |+++++.|+....+ ++.+++..+..-+.|||||+..
T Consensus 115 ~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~~e-i~~lr~~~~~~~i~V~gGI~~~g~~~~ 193 (246)
T 2yyu_A 115 PRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSANE-AAFIKERCGASFLAVTPGIRFADDAAH 193 (246)
T ss_dssp CEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECCHHH-HHHHHHHHCTTSEEEECCCCCCC----
T ss_pred CCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeCHHH-HHHHHHhcCCCCEEEeCCcCCCCCCcc
Confidence 5889999995 566 554 4566888889886 88778889888887 8888876653339999999999
Q ss_pred ------cHHHHHHccCCC---CCccccc-CHHHHHHHHHhh
Q psy11600 225 ------TIDECAKCLTGF---GGQKFMQ-DMMPKVKWLREN 255 (277)
Q Consensus 225 ------tv~~~~~~gpg~---ggq~F~~-~~~~kI~~l~~~ 255 (277)
|..++.++|+++ |+..|.. +..+.++++++.
T Consensus 194 dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~ 234 (246)
T 2yyu_A 194 DQVRVVTPRKARALGSDYIVIGRSLTRAADPLRTYARLQHE 234 (246)
T ss_dssp ---CCCCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHH
T ss_pred cccccCCHHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHHH
Confidence 999999999997 7788874 788888888764
No 20
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.88 E-value=1.9e-22 Score=174.71 Aligned_cols=193 Identities=20% Similarity=0.179 Sum_probs=161.1
Q ss_pred ccccCcccHHHHHHHHHHcCCCEEEEec-cccccccC-CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHh-HHHHHhcCC
Q psy11600 12 ILNSDLSNLHSESQNLLDSGADYLHLDV-MDGTFVPN-LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQW-IEPMADANV 88 (277)
Q Consensus 12 ~~~~d~~~l~~~~~~l~~~~~~~~h~Di-mDg~fvp~-~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~-i~~l~~ag~ 88 (277)
++|+|+.+++++++.+++.+ + |+|+ |+|. |+ +++|++.++++|+.+|++++.+|+|+.++.++ ++.+.++|+
T Consensus 4 i~a~D~~~~~~~~~~~~~~~-~--~~diie~G~--p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Ga 78 (211)
T 3f4w_A 4 QLALDELTLPEAMVFMDKVV-D--DVDIIEVGT--PFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGA 78 (211)
T ss_dssp EEEECSCCHHHHHHHHHHHG-G--GCSEEEECH--HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTC
T ss_pred EEEeCCCCHHHHHHHHHHhh-c--CccEEEeCc--HHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCC
Confidence 68999999999999999884 5 8999 7887 77 88999999999998789999999999998887 999999999
Q ss_pred CeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCcccee-eCCCCC
Q psy11600 89 DQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLA-IKPKTP 167 (277)
Q Consensus 89 d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~-i~p~t~ 167 (277)
|.+++|.+.... ++..+.+.+++.|++..+. ++|.++
T Consensus 79 d~v~v~~~~~~~------------------------------------------~~~~~~~~~~~~g~~~~v~~~~~~t~ 116 (211)
T 3f4w_A 79 DYVTVLGVTDVL------------------------------------------TIQSCIRAAKEAGKQVVVDMICVDDL 116 (211)
T ss_dssp SEEEEETTSCHH------------------------------------------HHHHHHHHHHHHTCEEEEECTTCSSH
T ss_pred CEEEEeCCCChh------------------------------------------HHHHHHHHHHHcCCeEEEEecCCCCH
Confidence 999999775420 3456777888888877775 577777
Q ss_pred HHhHHHHHhh-cCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---CCcccc-
Q psy11600 168 VDVIAEYIES-ADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF---GGQKFM- 242 (277)
Q Consensus 168 ~~~i~~~i~~-~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~---ggq~F~- 242 (277)
.+.+..+.+. +|++ .++||+.||.+.+..+++++++++..+++.+.++|||+.+++.++.++|++. |+..|.
T Consensus 117 ~~~~~~~~~~g~d~i---~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 117 PARVRLLEEAGADML---AVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp HHHHHHHHHHTCCEE---EEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTCCSEEEECHHHHTC
T ss_pred HHHHHHHHHcCCCEE---EEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCCEEEECHHHcCC
Confidence 7777777765 7763 5689998888766667889999888778999999999999999999999996 666666
Q ss_pred cCHHHHHHHHHh
Q psy11600 243 QDMMPKVKWLRE 254 (277)
Q Consensus 243 ~~~~~kI~~l~~ 254 (277)
++..+.++++++
T Consensus 194 ~d~~~~~~~l~~ 205 (211)
T 3f4w_A 194 ADPAGEARKISQ 205 (211)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 467777777765
No 21
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=99.86 E-value=1.5e-22 Score=179.99 Aligned_cols=194 Identities=15% Similarity=0.173 Sum_probs=157.1
Q ss_pred eeccccCcccHHHHHHHHHHcC--CCE--EEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHH---hHHH
Q psy11600 10 PSILNSDLSNLHSESQNLLDSG--ADY--LHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQ---WIEP 82 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~--~~~--~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~---~i~~ 82 (277)
+-|+|+|+.+++++++.+++.| ++| +|+|+| ++||++.+++||+..+.+++|+|+| ..|.. +++.
T Consensus 5 ~lilalD~~~l~~~~~~~~~~~~~v~~~Kv~~d~~-------~~~G~~~v~~l~~~~~~v~lD~kl~-Dip~t~~~~~~~ 76 (239)
T 1dbt_A 5 LPIIALDFASAEETLAFLAPFQQEPLFVKVGMELF-------YQEGPSIVKQLKERNCELFLDLKLH-DIPTTVNKAMKR 76 (239)
T ss_dssp SCEEECCCSSHHHHHHHTGGGTTSCCEEEECHHHH-------HHHTHHHHHHHHHTTCEEEEEEEEC-SCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHhcccCcEEEECHHHH-------HHhCHHHHHHHHHCCCcEEEEeccc-cchHHHHHHHHH
Confidence 4689999999999999999888 599 999996 7899999999998546899999999 77774 8889
Q ss_pred HHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHh---CCc-c
Q psy11600 83 MADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEA---GMK-V 158 (277)
Q Consensus 83 l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~---g~~-~ 158 (277)
+.++|+|++|||.+... . .+...++.+++. |++ +
T Consensus 77 ~~~~Gad~vtvH~~~g~---~---------------------------------------~l~~~~~~~~~~~~~g~~~~ 114 (239)
T 1dbt_A 77 LASLGVDLVNVHAAGGK---K---------------------------------------MMQAALEGLEEGTPAGKKRP 114 (239)
T ss_dssp HHTTTCSEEEEEGGGCH---H---------------------------------------HHHHHHHHHHHHSCTTSCCC
T ss_pred HHhcCCCEEEEeCcCCH---H---------------------------------------HHHHHHHHHHhhhccCCCCc
Confidence 99999999999998743 1 134566777777 765 2
Q ss_pred -ceeeCCCCCH--HhH-HHH-H--hhcCceEEEEec-CCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcH----
Q psy11600 159 -GLAIKPKTPV--DVI-AEY-I--ESADLVLIMTVE-PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTI---- 226 (277)
Q Consensus 159 -g~~i~p~t~~--~~i-~~~-i--~~~d~vl~mav~-Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv---- 226 (277)
++++.+.|+. +.+ .++ + +..|.++.|+++ |+++++.|+... ++++.+++..+...+.|||||+..+.
T Consensus 115 ~~~~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~-~~i~~lr~~~~~~~i~v~gGI~~~~~~~~d 193 (239)
T 1dbt_A 115 SLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV-HEAKAIYQAVSPSFLTVTPGIRMSEDAAND 193 (239)
T ss_dssp EEEEECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG-GGHHHHTTTSCTTCEEEECCBCCTTSCCTT
T ss_pred cEEEEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH-HHHHHHHHhcCCCcEEEeCCcCCCCCCccc
Confidence 6777776655 556 544 4 457888889886 888888898888 89999988776667999999999988
Q ss_pred -------HHHHHccCCC---CCcccc-cCHHHHHHHHHh
Q psy11600 227 -------DECAKCLTGF---GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 227 -------~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~ 254 (277)
.++.++|+++ |+..|. ++..+.++++++
T Consensus 194 q~rv~tp~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~ 232 (239)
T 1dbt_A 194 QVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRL 232 (239)
T ss_dssp CSSCBCHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred eeccCCHHHHHHcCCCEEEEChhhcCCCCHHHHHHHHHH
Confidence 8899999997 778887 477777777765
No 22
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.85 E-value=2e-21 Score=172.41 Aligned_cols=188 Identities=17% Similarity=0.192 Sum_probs=156.6
Q ss_pred ceEeeeccccCcc--cHHHHHHHHHHcCCCEEEEe------cccccccc-----------CCCCCHHHHHHHHhcCCCCe
Q psy11600 6 CMIGPSILNSDLS--NLHSESQNLLDSGADYLHLD------VMDGTFVP-----------NLTFGHPVVKCLRNKIPKAF 66 (277)
Q Consensus 6 ~~~~~s~~~~d~~--~l~~~~~~l~~~~~~~~h~D------imDg~fvp-----------~~~~g~~~v~~l~~~~~~~~ 66 (277)
..+.||++++|+. ++.+.++.+++. +|++|+| +|||+|++ |++++.+.++++|+. +++
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~-~~~- 81 (248)
T 1geq_A 5 GSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRH-SST- 81 (248)
T ss_dssp TEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTT-CCC-
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhh-CCC-
Confidence 4589999999996 899999999998 9999999 99999999 999999999999986 665
Q ss_pred eeeeeecc-Cc------HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecC
Q psy11600 67 FETHMMVQ-NP------QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 67 ~d~Hlmv~-~p------~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E 139 (277)
.+|+|+. || .++++.+.++|+|.+++|.....
T Consensus 82 -pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~---------------------------------------- 120 (248)
T 1geq_A 82 -PIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVF---------------------------------------- 120 (248)
T ss_dssp -CEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGG----------------------------------------
T ss_pred -CEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChh----------------------------------------
Confidence 5899984 88 78999999999999988855433
Q ss_pred CCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcC-ceEEEEecCCCCCch--hhhhhhhhHHHHHhhCCCccEE
Q psy11600 140 PVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESAD-LVLIMTVEPGFGGQK--FMQDMMPKVKWLRENYPTLNIE 216 (277)
Q Consensus 140 ~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d-~vl~mav~Pgt~gq~--~~~~~l~kI~~l~~~~~~~~i~ 216 (277)
+...+.+.+++.|.+..++++|.|+.+.+..+...+| ++.++++ ||+.|++ +.+..++.++++++.. ++.+.
T Consensus 121 ---~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~-~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~ 195 (248)
T 1geq_A 121 ---HAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSL-YGTTGAREEIPKTAYDLLRRAKRIC-RNKVA 195 (248)
T ss_dssp ---GHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEECC-C-------CCCHHHHHHHHHHHHHC-SSCEE
T ss_pred ---hHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEEEEEC-CccCCCCCCCChhHHHHHHHHHhhc-CCCEE
Confidence 5567888889999999999999999999988888888 8878888 9877765 5567788888888765 68899
Q ss_pred EeCCCCc-CcHHHHHHccCCC---CCcccc
Q psy11600 217 VDGGVGP-NTIDECAKCLTGF---GGQKFM 242 (277)
Q Consensus 217 vdGgV~~-~tv~~~~~~gpg~---ggq~F~ 242 (277)
++|||+. +++.++.++|++. |+..|.
T Consensus 196 ~~GGI~~~e~i~~~~~~Gad~vivGsai~~ 225 (248)
T 1geq_A 196 VGFGVSKREHVVSLLKEGANGVVVGSALVK 225 (248)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred EEeecCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 9999999 9999999999885 665554
No 23
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.84 E-value=3.5e-21 Score=166.26 Aligned_cols=194 Identities=14% Similarity=0.097 Sum_probs=149.1
Q ss_pred eeccccCcccHHHHHHHHHHcC--CCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC-cHHhHHHHHhc
Q psy11600 10 PSILNSDLSNLHSESQNLLDSG--ADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN-PQQWIEPMADA 86 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~--~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~-p~~~i~~l~~a 86 (277)
.-|+|+|+.+++++++.+++.+ +++ ++||++.| +++|++.+++||+.+|+.++++|+|+.| |..+++.+.++
T Consensus 2 ~li~a~d~~~~~~~~~~~~~~~~~v~~--iev~~~~~---~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~ 76 (207)
T 3ajx_A 2 KLQVAIDLLSTEAALELAGKVAEYVDI--IELGTPLI---KAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKA 76 (207)
T ss_dssp EEEEEECCSCHHHHHHHHHHHGGGCSE--EEECHHHH---HHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHT
T ss_pred eEEEEeCCCCHHHHHHHHHHhhccCCE--EEECcHHH---HhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhC
Confidence 3478999999999998887664 488 55699876 6799999999999877999999999999 88889999999
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeC-CC
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIK-PK 165 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~-p~ 165 (277)
|+|.+++|.+..+. ......+.+++.|.+.|+.+. +.
T Consensus 77 Gad~v~vh~~~~~~------------------------------------------~~~~~~~~~~~~g~~~gv~~~s~~ 114 (207)
T 3ajx_A 77 GADLVTVLGSADDS------------------------------------------TIAGAVKAAQAHNKGVVVDLIGIE 114 (207)
T ss_dssp TCSEEEEETTSCHH------------------------------------------HHHHHHHHHHHHTCEEEEECTTCS
T ss_pred CCCEEEEeccCChH------------------------------------------HHHHHHHHHHHcCCceEEEEecCC
Confidence 99999999876530 334556667766777666552 12
Q ss_pred CCHHhHHHHHh-hcCce-EEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---CCcc
Q psy11600 166 TPVDVIAEYIE-SADLV-LIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF---GGQK 240 (277)
Q Consensus 166 t~~~~i~~~i~-~~d~v-l~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~---ggq~ 240 (277)
+|-+.+..+.+ .+|++ +.|++.|+++|+++.+ ++++++++. ++.+.++|||+.+|+.++.++|+++ |+..
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~---~~i~~~~~~--~~pi~v~GGI~~~~~~~~~~aGad~vvvGsaI 189 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLN---GLLAAGEKA--RVPFSVAGGVKVATIPAVQKAGAEVAVAGGAI 189 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTH---HHHHHHHHH--TSCEEEESSCCGGGHHHHHHTTCSEEEESHHH
T ss_pred ChHHHHHHHHHhCCCEEEEEecccccccCCCchH---HHHHHhhCC--CCCEEEECCcCHHHHHHHHHcCCCEEEEeeec
Confidence 22222222222 37888 8899998888887665 677777654 5679999999999999999999996 7788
Q ss_pred ccc-CHHHHHHHHHhh
Q psy11600 241 FMQ-DMMPKVKWLREN 255 (277)
Q Consensus 241 F~~-~~~~kI~~l~~~ 255 (277)
|.. +..+.++++++.
T Consensus 190 ~~~~dp~~~~~~~~~~ 205 (207)
T 3ajx_A 190 YGAADPAAAAKELRAA 205 (207)
T ss_dssp HTSSSHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHH
Confidence 874 777788887753
No 24
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.84 E-value=8.7e-21 Score=167.73 Aligned_cols=163 Identities=26% Similarity=0.381 Sum_probs=124.0
Q ss_pred eeeeeeeccCcH---HhHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhCCCcccc------hhhhhHHHHh
Q psy11600 66 FFETHMMVQNPQ---QWIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAGMKVGQV------LQDWIEPMAD 128 (277)
Q Consensus 66 ~~d~Hlmv~~p~---~~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~~~~~d~------p~~~i~~~~~ 128 (277)
.+...++..|.. ++++.+.++|+||+ |++++|| |+.+++++|+.+..++++ |++|++.+++
T Consensus 6 ~i~psila~D~~~l~~~i~~~~~~Gad~i--hldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~ 83 (230)
T 1tqj_A 6 VVAPSILSADFSRLGEEIKAVDEAGADWI--HVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAK 83 (230)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCSEE--EEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHH
T ss_pred EEEEEeeecCHhHHHHHHHHHHHcCCCEE--EEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHH
Confidence 466777877754 45778888899999 8888876 789999999998766553 8999999999
Q ss_pred cCCCeEEeecCCCCCh--HHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHH
Q psy11600 129 ANVDQYTFHVEPVDNV--PQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWL 206 (277)
Q Consensus 129 ~g~d~it~H~E~~~~~--~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l 206 (277)
+|||.+|||.| +. ....+ ..+.++..++.++++++|.|+. +.+
T Consensus 84 aGadgv~vh~e---~~~~~~~~~---------------------~~~~i~~~g~~~gv~~~p~t~~-----------e~~ 128 (230)
T 1tqj_A 84 AGADIISVHVE---HNASPHLHR---------------------TLCQIRELGKKAGAVLNPSTPL-----------DFL 128 (230)
T ss_dssp HTCSEEEEECS---TTTCTTHHH---------------------HHHHHHHTTCEEEEEECTTCCG-----------GGG
T ss_pred cCCCEEEECcc---cccchhHHH---------------------HHHHHHHcCCcEEEEEeCCCcH-----------HHH
Confidence 99999999987 32 22333 3445677888999999999973 222
Q ss_pred HhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhC----CCCeEEEeCCCCccCHHHhh
Q psy11600 207 RENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENY----PTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 207 ~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~----~~~~I~VDGGI~~~~~~~~~ 276 (277)
+++.+..|+...|+++ ||||||.|.+..++|++++|+.. .++.|+||||||.+|+++++
T Consensus 129 ~~~~~~~D~v~~msv~-----------pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~ 191 (230)
T 1tqj_A 129 EYVLPVCDLILIMSVN-----------PGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVL 191 (230)
T ss_dssp TTTGGGCSEEEEESSC-----------C----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHH
T ss_pred HHHHhcCCEEEEEEec-----------cccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHH
Confidence 3333456666655554 99999999999999999999864 36889999999999998875
No 25
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.82 E-value=5.8e-20 Score=165.81 Aligned_cols=190 Identities=16% Similarity=0.192 Sum_probs=158.1
Q ss_pred ceEeeeccccCc--ccHHHHHHHHHHcCCCEEEEec------cccccccC-----------CCCCHHHHHHHHhcCCCCe
Q psy11600 6 CMIGPSILNSDL--SNLHSESQNLLDSGADYLHLDV------MDGTFVPN-----------LTFGHPVVKCLRNKIPKAF 66 (277)
Q Consensus 6 ~~~~~s~~~~d~--~~l~~~~~~l~~~~~~~~h~Di------mDg~fvp~-----------~~~g~~~v~~l~~~~~~~~ 66 (277)
..+.|+|+++|+ .++.+.++.|++.|+|++|+|+ |||+|++| +.++++.++++|+.++++|
T Consensus 17 ~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~P 96 (268)
T 1qop_A 17 GAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIP 96 (268)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSC
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 458999999999 7888999999999999999999 99999997 5677899999998767777
Q ss_pred eeeeeec-cCc------HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecC
Q psy11600 67 FETHMMV-QNP------QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 67 ~d~Hlmv-~~p------~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E 139 (277)
+|+|+ .|| +++++.+.++|+|.+++|-...+
T Consensus 97 --v~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e---------------------------------------- 134 (268)
T 1qop_A 97 --IGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVE---------------------------------------- 134 (268)
T ss_dssp --EEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGG----------------------------------------
T ss_pred --EEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHH----------------------------------------
Confidence 78886 566 77899999999999988844332
Q ss_pred CCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcC-ceEEEEecCCCCCc--hhhhhhhhhHHHHHhhCCCccEE
Q psy11600 140 PVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESAD-LVLIMTVEPGFGGQ--KFMQDMMPKVKWLRENYPTLNIE 216 (277)
Q Consensus 140 ~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d-~vl~mav~Pgt~gq--~~~~~~l~kI~~l~~~~~~~~i~ 216 (277)
......+.+++.|++...-++|.++.+.+..+....+ ++..|+++ |+.|+ ++.++..++++++++.. ++.+.
T Consensus 135 ---~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~-G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~ 209 (268)
T 1qop_A 135 ---ESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRS-GVTGAENRGALPLHHLIEKLKEYH-AAPAL 209 (268)
T ss_dssp ---GCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSS-SCCCSSSCC--CCHHHHHHHHHTT-CCCEE
T ss_pred ---HHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecC-CcCCCccCCCchHHHHHHHHHhcc-CCcEE
Confidence 4567778889888887888899999998888887765 88888877 88888 67788889999998865 67899
Q ss_pred EeCCCC-cCcHHHHHHccCCC---CCcccc
Q psy11600 217 VDGGVG-PNTIDECAKCLTGF---GGQKFM 242 (277)
Q Consensus 217 vdGgV~-~~tv~~~~~~gpg~---ggq~F~ 242 (277)
++|||+ .+++.++..+|++. |+..+.
T Consensus 210 vggGI~t~e~~~~~~~agAD~vVVGSai~~ 239 (268)
T 1qop_A 210 QGFGISSPEQVSAAVRAGAAGAISGSAIVK 239 (268)
T ss_dssp EESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 999998 89999988999995 665554
No 26
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.79 E-value=8.4e-19 Score=154.37 Aligned_cols=168 Identities=32% Similarity=0.481 Sum_probs=129.2
Q ss_pred CCeeeeeeeccCcHH---hHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhCCCcccc------hhhhhHHH
Q psy11600 64 KAFFETHMMVQNPQQ---WIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAGMKVGQV------LQDWIEPM 126 (277)
Q Consensus 64 ~~~~d~Hlmv~~p~~---~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~~~~~d~------p~~~i~~~ 126 (277)
...+...+|..|+.+ .++.+.++|+|++ |++++|| |++.++++|+.+..++++ |.+|++.+
T Consensus 6 ~~~i~psi~a~d~~~l~~~i~~~~~~Gad~i--~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~ 83 (228)
T 1h1y_A 6 AAKIAPSMLSSDFANLAAEADRMVRLGADWL--HMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPL 83 (228)
T ss_dssp CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEE--EEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHH
T ss_pred CCeEEEEeeeCCHHHHHHHHHHHHHcCCCEE--EEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHH
Confidence 345677888887544 5777888899999 8887765 689999999988655543 88999999
Q ss_pred HhcCCCeEEeecCCCCChHHH-HHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHH
Q psy11600 127 ADANVDQYTFHVEPVDNVPQV-IRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKW 205 (277)
Q Consensus 127 ~~~g~d~it~H~E~~~~~~~~-~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~ 205 (277)
.++|+|.++||.| ...+. .+.+++ ++..++.++++++|.|+. +.++.
T Consensus 84 ~~agad~v~vH~~---~~~~~~~~~~~~---------------------i~~~g~~igv~~~p~t~~--------e~~~~ 131 (228)
T 1h1y_A 84 AKAGASGFTFHIE---VSRDNWQELIQS---------------------IKAKGMRPGVSLRPGTPV--------EEVFP 131 (228)
T ss_dssp HHHTCSEEEEEGG---GCTTTHHHHHHH---------------------HHHTTCEEEEEECTTSCG--------GGGHH
T ss_pred HHcCCCEEEECCC---CcccHHHHHHHH---------------------HHHcCCCEEEEEeCCCCH--------HHHHH
Confidence 9999999999999 76665 554543 455677788999999873 22333
Q ss_pred HHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 206 LRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 206 l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
+.+.....+....|+++ ||+|||.|.+..+++++++|+..+++.|.||||||.+|+++++
T Consensus 132 ~~~~~~~~d~vl~~sv~-----------pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~ 191 (228)
T 1h1y_A 132 LVEAENPVELVLVMTVE-----------PGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAA 191 (228)
T ss_dssp HHHSSSCCSEEEEESSC-----------TTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHH
T ss_pred HHhcCCCCCEEEEEeec-----------CCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHH
Confidence 32210045666655554 9999999999999999999998767889999999999998764
No 27
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=99.78 E-value=2.9e-19 Score=157.13 Aligned_cols=196 Identities=12% Similarity=0.108 Sum_probs=150.7
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCC--CCeeeeeeeccCcHHhHHHHHhcC
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIP--KAFFETHMMVQNPQQWIEPMADAN 87 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~--~~~~d~Hlmv~~p~~~i~~l~~ag 87 (277)
+=++|+|+.+++++++.+++.+-...|++||++.| ++||++.|++||+.+| .+++|+|+| ..|..+.+.+.++|
T Consensus 7 ~livAlD~~~~~~a~~~~~~~~~~~~~ikvg~~lf---~~~G~~~v~~l~~~~p~~~iflDlKl~-Dip~t~~~~~~~~G 82 (221)
T 3exr_A 7 NLQVALDHSNLKGAITAAVSVGNEVDVIEAGTVCL---LQVGSELVEVLRSLFPDKIIVADTKCA-DAGGTVAKNNAVRG 82 (221)
T ss_dssp EEEEEECCSSHHHHHHHHHHHGGGCSEEEECHHHH---HHHCTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHHHTTT
T ss_pred CEEEEeCCCCHHHHHHHHHhhCCCceEEEECHHHH---HhcCHHHHHHHHHhCCCCcEEEEEEee-ccHHHHHHHHHHcC
Confidence 34789999999999999999884445577799999 5899999999998764 489999999 78999999999999
Q ss_pred CCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhC---CccceeeCC
Q psy11600 88 VDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAG---MKVGLAIKP 164 (277)
Q Consensus 88 ~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g---~~~g~~i~p 164 (277)
+|++|+|.+... . .+....+.+++.| .+.++.+.+
T Consensus 83 ad~vtVH~~~g~---~---------------------------------------~l~~a~~~~~~~g~~~~~~~Vt~lt 120 (221)
T 3exr_A 83 ADWMTCICSATI---P---------------------------------------TMKAARKAIEDINPDKGEIQVELYG 120 (221)
T ss_dssp CSEEEEETTSCH---H---------------------------------------HHHHHHHHHHHHCTTTCEEEEECCS
T ss_pred CCEEEEeccCCH---H---------------------------------------HHHHHHHHHHhcCCCcceEEEEEcC
Confidence 999999987543 1 2445566677766 567999999
Q ss_pred CCCHHhHHHHHh-hc-CceEEEEecCCCCCchhhhhhhhhHHHHHhhC-CCccEEEeCCCCcCcHHHHHHccCCC---CC
Q psy11600 165 KTPVDVIAEYIE-SA-DLVLIMTVEPGFGGQKFMQDMMPKVKWLRENY-PTLNIEVDGGVGPNTIDECAKCLTGF---GG 238 (277)
Q Consensus 165 ~t~~~~i~~~i~-~~-d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~-~~~~i~vdGgV~~~tv~~~~~~gpg~---gg 238 (277)
.++.+.+.++++ .+ +.++-++..++..|+. ...+.++.+++.. +++.++|||||+..|.+.+.++|+++ |+
T Consensus 121 s~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv---~s~~e~~~ir~~~~~~~~i~v~gGI~~~~~~~~~~aGad~~VvG~ 197 (221)
T 3exr_A 121 DWTYDQAQQWLDAGISQAIYHQSRDALLAGET---WGEKDLNKVKKLIEMGFRVSVTGGLSVDTLKLFEGVDVFTFIAGR 197 (221)
T ss_dssp SCCHHHHHHHHHTTCCEEEEECCHHHHHHTCC---CCHHHHHHHHHHHHHTCEEEEESSCCGGGGGGGTTCCCSEEEECH
T ss_pred CCCHHHHHHHHcCCHHHHHHHHHHhcCCCccc---cCHHHHHHHHHhhcCCceEEEECCCCHHHHHHHHHCCCCEEEECc
Confidence 999988877765 44 3455566666544432 1133455555543 46778999999999999999999997 77
Q ss_pred cccc-cCHHHHHHHHHh
Q psy11600 239 QKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 239 q~F~-~~~~~kI~~l~~ 254 (277)
..|. ++..+.++++++
T Consensus 198 ~I~~a~dp~~a~~~~~~ 214 (221)
T 3exr_A 198 GITEAKNPAGAARAFKD 214 (221)
T ss_dssp HHHTSSSHHHHHHHHHH
T ss_pred hhhCCCCHHHHHHHHHH
Confidence 8886 467777777665
No 28
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.73 E-value=3.4e-17 Score=146.76 Aligned_cols=189 Identities=16% Similarity=0.217 Sum_probs=150.5
Q ss_pred ceEeeeccccCc--ccHHHHHHHHHHcCCCEEEEe------cccccccc-----------CCCCCHHHHHHHHhcCCCCe
Q psy11600 6 CMIGPSILNSDL--SNLHSESQNLLDSGADYLHLD------VMDGTFVP-----------NLTFGHPVVKCLRNKIPKAF 66 (277)
Q Consensus 6 ~~~~~s~~~~d~--~~l~~~~~~l~~~~~~~~h~D------imDg~fvp-----------~~~~g~~~v~~l~~~~~~~~ 66 (277)
..+.|++++.|+ .++.+.++.+++.|+|++|++ +|||+|++ ++.++.+.++++|+. +++|
T Consensus 18 ~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~P 96 (262)
T 1rd5_A 18 TAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCP 96 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSC
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCC
Confidence 458999999999 678888999999999999999 69999997 566678899999986 7777
Q ss_pred eeeeeec-cCcHH--hHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCC
Q psy11600 67 FETHMMV-QNPQQ--WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDN 143 (277)
Q Consensus 67 ~d~Hlmv-~~p~~--~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~ 143 (277)
+|+|. .||.. .++.+.++|+|.+++|-...+ .
T Consensus 97 --v~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~-------------------------------------------~ 131 (262)
T 1rd5_A 97 --VVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYV-------------------------------------------A 131 (262)
T ss_dssp --EEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTT-------------------------------------------T
T ss_pred --EEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChh-------------------------------------------h
Confidence 67785 45433 356688899999876633322 5
Q ss_pred hHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhc-CceEEEEecCCCCCc--hhhhhhhhhHHHHHhhCCCccEEEeCC
Q psy11600 144 VPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESA-DLVLIMTVEPGFGGQ--KFMQDMMPKVKWLRENYPTLNIEVDGG 220 (277)
Q Consensus 144 ~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~-d~vl~mav~Pgt~gq--~~~~~~l~kI~~l~~~~~~~~i~vdGg 220 (277)
..+..+.+++.|++....+.|.++.+.+..+.... +++.++++ +|+.|+ .+.+..++.++++++.. ++.+.++||
T Consensus 132 ~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~-~G~tG~~~~~~~~~~~~i~~v~~~~-~~pI~vgGG 209 (262)
T 1rd5_A 132 AHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSV-NGVTGPRANVNPRVESLIQEVKKVT-NKPVAVGFG 209 (262)
T ss_dssp HHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECS-SCCBCTTSCBCTHHHHHHHHHHHHC-SSCEEEESC
T ss_pred HHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecC-CCCCCCCcCCCchHHHHHHHHHhhc-CCeEEEECC
Confidence 66777888888988899999999988877776554 47888886 887777 56667778888888764 678999999
Q ss_pred CC-cCcHHHHHHccCCC---CCcccc
Q psy11600 221 VG-PNTIDECAKCLTGF---GGQKFM 242 (277)
Q Consensus 221 V~-~~tv~~~~~~gpg~---ggq~F~ 242 (277)
|+ .+++.++.++|++. |+..+.
T Consensus 210 I~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 210 ISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 99 99999999999995 665443
No 29
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.66 E-value=5.2e-16 Score=140.02 Aligned_cols=190 Identities=17% Similarity=0.199 Sum_probs=151.9
Q ss_pred ceEeeeccccCc--ccHHHHHHHHHHcCCCEEEEe------ccccccccCCC-----CC------HHHHHHHHhcCCCCe
Q psy11600 6 CMIGPSILNSDL--SNLHSESQNLLDSGADYLHLD------VMDGTFVPNLT-----FG------HPVVKCLRNKIPKAF 66 (277)
Q Consensus 6 ~~~~~s~~~~d~--~~l~~~~~~l~~~~~~~~h~D------imDg~fvp~~~-----~g------~~~v~~l~~~~~~~~ 66 (277)
.-+.|++++.|+ ..+.+.++.|++.|+|++|++ ++||+++++.+ .| .+.++++|+.++++|
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~P 97 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMP 97 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 358999999999 789999999999999999999 99999999866 56 689999998657777
Q ss_pred eeeeeecc-Cc------HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecC
Q psy11600 67 FETHMMVQ-NP------QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 67 ~d~Hlmv~-~p------~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E 139 (277)
+|+|.- || +++++.+.++|+|.+.+|-.+.+
T Consensus 98 --ivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~e---------------------------------------- 135 (267)
T 3vnd_A 98 --IGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVE---------------------------------------- 135 (267)
T ss_dssp --EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGG----------------------------------------
T ss_pred --EEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHh----------------------------------------
Confidence 778865 77 77899999999999877733322
Q ss_pred CCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhc-CceEEEEecCCCCCch-hhhhhhhhHHHHHhhCCCccEEE
Q psy11600 140 PVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESA-DLVLIMTVEPGFGGQK-FMQDMMPKVKWLRENYPTLNIEV 217 (277)
Q Consensus 140 ~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~-d~vl~mav~Pgt~gq~-~~~~~l~kI~~l~~~~~~~~i~v 217 (277)
...+..+.+++.|+....-+.|.|+.+.+..+.+.. +++..+++.+.|+.+. +.+++.+.++++++.. ++-+.+
T Consensus 136 ---e~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~-~~pv~v 211 (267)
T 3vnd_A 136 ---ESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN-APPPLL 211 (267)
T ss_dssp ---GCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT-CCCEEE
T ss_pred ---hHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc-CCCEEE
Confidence 456777888899988888899999999999998887 5888889998888775 5667788888888764 578999
Q ss_pred eCCCC-cCcHHHHHHccCCC---CCccc
Q psy11600 218 DGGVG-PNTIDECAKCLTGF---GGQKF 241 (277)
Q Consensus 218 dGgV~-~~tv~~~~~~gpg~---ggq~F 241 (277)
.|||+ .+++....++|++. |+..+
T Consensus 212 GfGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 212 GFGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp CSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred ECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 99995 88888788888885 55443
No 30
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.62 E-value=1.1e-15 Score=135.05 Aligned_cols=173 Identities=12% Similarity=0.134 Sum_probs=129.3
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPV 98 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~ 98 (277)
+..+..+.+++.|+|++|++.+||.|.++..+ +.++++++. +++|+.+|.|+.+|++ ++.+.++|||.+++|.+..
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~-~~ipv~v~ggI~~~~~-~~~~l~~Gad~V~lg~~~l 108 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQA-MDIKVELSGGIRDDDT-LAAALATGCTRVNLGTAAL 108 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHH-CSSEEEEESSCCSHHH-HHHHHHTTCSEEEECHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHh-cCCcEEEECCcCCHHH-HHHHHHcCCCEEEECchHh
Confidence 55567788899999999999999999999888 899999986 7999999999999986 8889999999998888765
Q ss_pred CCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCC-------------
Q psy11600 99 DNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPK------------- 165 (277)
Q Consensus 99 d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~------------- 165 (277)
. ++..+.+.++..|.+..+++++.
T Consensus 109 ~-------------------------------------------~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~ 145 (244)
T 1vzw_A 109 E-------------------------------------------TPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDG 145 (244)
T ss_dssp H-------------------------------------------CHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCC
T ss_pred h-------------------------------------------CHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCC
Confidence 5 44555666666665556666654
Q ss_pred -CCHHhHHHHHhh-cCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCc-CcHHHHHHc---cCCC---
Q psy11600 166 -TPVDVIAEYIES-ADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKC---LTGF--- 236 (277)
Q Consensus 166 -t~~~~i~~~i~~-~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~-~tv~~~~~~---gpg~--- 236 (277)
++++....+.+. +|.+++++++|+..++.+..+.++++ ++.. ++.+..+|||+- +++..+.++ |++.
T Consensus 146 ~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i---~~~~-~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~v 221 (244)
T 1vzw_A 146 GDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNV---CAAT-DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIV 221 (244)
T ss_dssp CBHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHH---HHTC-SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEE
T ss_pred CCHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHH---HHhc-CCCEEEECCCCCHHHHHHHHhhccCCCceeee
Confidence 556655666665 89999999999876666654444444 4332 578999999996 999999998 7774
Q ss_pred CCcccc
Q psy11600 237 GGQKFM 242 (277)
Q Consensus 237 ggq~F~ 242 (277)
|+..|.
T Consensus 222 G~al~~ 227 (244)
T 1vzw_A 222 GKALYA 227 (244)
T ss_dssp CHHHHT
T ss_pred eHHHHc
Confidence 554444
No 31
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.61 E-value=4.5e-15 Score=128.82 Aligned_cols=163 Identities=21% Similarity=0.357 Sum_probs=119.4
Q ss_pred eeeeeeeccCcH---HhHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhCCCcccc------hhhhhHHHHh
Q psy11600 66 FFETHMMVQNPQ---QWIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAGMKVGQV------LQDWIEPMAD 128 (277)
Q Consensus 66 ~~d~Hlmv~~p~---~~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~~~~~d~------p~~~i~~~~~ 128 (277)
.+...++..|+. +.++.+.++|++++ |++.+|| |+..++++|+.+..++++ |.++++.+.+
T Consensus 5 ~~~~~i~a~D~~~~~~~~~~~~~~G~~~i--~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~ 82 (220)
T 2fli_A 5 KIAPSILAADYANFASELARIEETDAEYV--HIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQ 82 (220)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCEE--EEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHH
T ss_pred EEEEEEEeCCHHHHHHHHHHHHHcCCCEE--EEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHH
Confidence 356667777764 45777888999998 6665544 699999999987555443 6778999999
Q ss_pred cCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHh
Q psy11600 129 ANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRE 208 (277)
Q Consensus 129 ~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~ 208 (277)
+|+|.+++|.+ ......+.++ .++..+..++.+++|.|+.+ .++.
T Consensus 83 ~gad~v~vh~~---~~~~~~~~~~---------------------~~~~~g~~i~~~~~~~t~~e-----------~~~~ 127 (220)
T 2fli_A 83 AGADIMTIHTE---STRHIHGALQ---------------------KIKAAGMKAGVVINPGTPAT-----------ALEP 127 (220)
T ss_dssp HTCSEEEEEGG---GCSCHHHHHH---------------------HHHHTTSEEEEEECTTSCGG-----------GGGG
T ss_pred cCCCEEEEccC---ccccHHHHHH---------------------HHHHcCCcEEEEEcCCCCHH-----------HHHH
Confidence 99999999998 6544444443 34445677889999987631 2223
Q ss_pred hCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhC----CCCeEEEeCCCCccCHHHhh
Q psy11600 209 NYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENY----PTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 209 ~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~----~~~~I~VDGGI~~~~~~~~~ 276 (277)
+.+..+..+- +++ +||++|+.|.+..+++++++|+.. .++.|.++||||++|++++.
T Consensus 128 ~~~~~d~vl~-----~~~------~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~ 188 (220)
T 2fli_A 128 LLDLVDQVLI-----MTV------NPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACY 188 (220)
T ss_dssp GTTTCSEEEE-----ESS------CTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHH
T ss_pred HHhhCCEEEE-----EEE------CCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHH
Confidence 3344565543 333 599999999998889998888754 26779999999999998764
No 32
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.57 E-value=3.8e-14 Score=124.21 Aligned_cols=166 Identities=22% Similarity=0.282 Sum_probs=120.5
Q ss_pred CeeeeeeeccCcHH---hHHHHHhcCCCeEEEeccCCC--------CCHHHHHHHHhhCCCcccc------hhhhhHHHH
Q psy11600 65 AFFETHMMVQNPQQ---WIEPMADANVDQYTFHVEPVD--------NVPQVIRQIKEAGMKVGQV------LQDWIEPMA 127 (277)
Q Consensus 65 ~~~d~Hlmv~~p~~---~i~~l~~ag~d~i~~H~e~~d--------~g~~~i~~i~~~~~~~~d~------p~~~i~~~~ 127 (277)
..+...++..++.+ .++.+.++|++++ |++.+| .+++.++++|+.+..++++ |.++++.+.
T Consensus 11 ~~i~p~i~a~d~~~~~~~i~~~~~~G~d~i--~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~ 88 (230)
T 1rpx_A 11 IIVSPSILSANFSKLGEQVKAIEQAGCDWI--HVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFI 88 (230)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCCE--EEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHH
T ss_pred eEEEEEeecCCHHHHHHHHHHHHHCCCCEE--EEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHH
Confidence 35677888888764 4777888999999 666443 3789999999987544432 778999999
Q ss_pred hcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHH
Q psy11600 128 DANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLR 207 (277)
Q Consensus 128 ~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~ 207 (277)
++|+|.+++|.| ... +.....+...++..+..++++++|+|+.+ .+.
T Consensus 89 ~~Gad~v~vh~~---~~~-------------------~~~~~~~~~~~~~~g~~ig~~~~p~t~~e-----------~~~ 135 (230)
T 1rpx_A 89 KAGADIVSVHCE---QSS-------------------TIHLHRTINQIKSLGAKAGVVLNPGTPLT-----------AIE 135 (230)
T ss_dssp HTTCSEEEEECS---TTT-------------------CSCHHHHHHHHHHTTSEEEEEECTTCCGG-----------GGT
T ss_pred HcCCCEEEEEec---Ccc-------------------chhHHHHHHHHHHcCCcEEEEeCCCCCHH-----------HHH
Confidence 999999999975 211 01112233445566788899999998632 222
Q ss_pred hhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCC----CCeEEEeCCCCccCHHHhh
Q psy11600 208 ENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 208 ~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~----~~~I~VDGGI~~~~~~~~~ 276 (277)
.+....+..+.+++ +||++|+.|.+..+++++++|+..+ ++.+.++||||++|++++.
T Consensus 136 ~~~~~~d~vl~~~~-----------~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~ 197 (230)
T 1rpx_A 136 YVLDAVDLVLIMSV-----------NPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVI 197 (230)
T ss_dssp TTTTTCSEEEEESS-----------CTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHH
T ss_pred HHHhhCCEEEEEEE-----------cCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHH
Confidence 33344566554343 5999999999999999999887543 6789999999999998764
No 33
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.57 E-value=9.5e-15 Score=128.67 Aligned_cols=181 Identities=13% Similarity=0.141 Sum_probs=134.0
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPV 98 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~ 98 (277)
+..+..+.+++.|++++|++.||+.|.++..+ +.++++++. +++|+.+|.++.+|++ ++.+.++|||.+++|.+..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~-~~ipv~v~ggi~~~~~-~~~~l~~Gad~V~lg~~~l 107 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGK-LDVQVELSGGIRDDES-LAAALATGCARVNVGTAAL 107 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHH-CSSEEEEESSCCSHHH-HHHHHHTTCSEEEECHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHh-cCCcEEEECCCCCHHH-HHHHHHcCCCEEEECchHh
Confidence 45567778899999999999999999999888 899999986 7999999999999985 8888999999998887765
Q ss_pred CCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCC-------------
Q psy11600 99 DNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPK------------- 165 (277)
Q Consensus 99 d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~------------- 165 (277)
. ++..+.+.++..|.+..+++.+.
T Consensus 108 ~-------------------------------------------~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~ 144 (244)
T 2y88_A 108 E-------------------------------------------NPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGW 144 (244)
T ss_dssp H-------------------------------------------CHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGG
T ss_pred h-------------------------------------------ChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCc
Confidence 4 44445556666654455566554
Q ss_pred -----CCHHhHHHHHhh-cCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCc-CcHHHHHHc---cCC
Q psy11600 166 -----TPVDVIAEYIES-ADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKC---LTG 235 (277)
Q Consensus 166 -----t~~~~i~~~i~~-~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~-~tv~~~~~~---gpg 235 (277)
++++.+..+.+. ++.+++++++++..++.+..+ .++++++. .++.+..+|||+- +++.++.++ |++
T Consensus 145 ~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~---~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gad 220 (244)
T 2y88_A 145 ETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLD---LLAGVADR-TDAPVIASGGVSSLDDLRAIATLTHRGVE 220 (244)
T ss_dssp TEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHH---HHHHHHTT-CSSCEEEESCCCSHHHHHHHHTTGGGTEE
T ss_pred cCCCCCHHHHHHHHHhCCCCEEEEEecCCccccCCCCHH---HHHHHHHh-CCCCEEEECCCCCHHHHHHHHhhccCCCC
Confidence 345555555555 788999999997665555433 34444443 3678999999996 999999988 666
Q ss_pred C---CCcccc-cCHHHHHH
Q psy11600 236 F---GGQKFM-QDMMPKVK 250 (277)
Q Consensus 236 ~---ggq~F~-~~~~~kI~ 250 (277)
. |+..|. +..++.+.
T Consensus 221 ~v~vG~al~~~~~~~~~~~ 239 (244)
T 2y88_A 221 GAIVGKALYARRFTLPQAL 239 (244)
T ss_dssp EEEECHHHHTTSSCHHHHH
T ss_pred EEEEcHHHHCCCcCHHHHH
Confidence 3 544444 33444443
No 34
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=99.54 E-value=8.5e-15 Score=126.95 Aligned_cols=149 Identities=10% Similarity=0.046 Sum_probs=111.5
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhh--CCCcccc--------hhhhhHHHHhcCCCeEEee
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEA--GMKVGQV--------LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~--~~~~~d~--------p~~~i~~~~~~g~d~it~H 137 (277)
..++++.++.+.+.|.+++ |++++++ |+..|+++|+. +..+.|+ |..|++.++++|||++|+|
T Consensus 8 ~~~l~~~~~~~~~~~~~~~--~~kv~~~~f~~~G~~~i~~lr~~~~~~v~~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh 85 (208)
T 2czd_A 8 VYEGERAIKIAKSVKDYIS--MIKVNWPLILGSGVDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGAGADYVIVH 85 (208)
T ss_dssp CCSHHHHHHHHHHHGGGCS--EEEEEHHHHHHHCTTHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCHHHHHHHHHHhccccc--EEEecHHHHHhhCHHHHHHHHHcCCCEEEEEeeeCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 3567888998989999988 9999876 99999999998 4444443 8999999999999999999
Q ss_pred cCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhh-hhhHHHHHhhCCCccEE
Q psy11600 138 VEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDM-MPKVKWLRENYPTLNIE 216 (277)
Q Consensus 138 ~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~-l~kI~~l~~~~~~~~i~ 216 (277)
.| .-... +. .+.+.. +++++|+|+.....+ . .+.++.+.
T Consensus 86 ~~------~g~~~--------------------i~-~~~~~~---gv~vl~~t~~~~~~~-~~~~~v~~~~--------- 125 (208)
T 2czd_A 86 TF------VGRDS--------------------VM-AVKELG---EIIMVVEMSHPGALE-FINPLTDRFI--------- 125 (208)
T ss_dssp ST------TCHHH--------------------HH-HHHTTS---EEEEECCCCSGGGGT-TTGGGHHHHH---------
T ss_pred cc------CCHHH--------------------HH-HHHHhC---CcEEEEecCCcchhh-HHHHHHHHHH---------
Confidence 87 22121 22 223333 889999998654433 3 45555542
Q ss_pred EeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCC-CCeEEEeCCCCcc--CHHHhh
Q psy11600 217 VDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVGPN--TIDECA 276 (277)
Q Consensus 217 vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~-~~~I~VDGGI~~~--~~~~~~ 276 (277)
.|++ +||++||.|.+...++++++|+..+ .+.| |||||+.+ |+.++.
T Consensus 126 ------~~a~------~~G~~G~~~~~~~~~~i~~lr~~~~~~~~i-v~gGI~~~g~~~~~~~ 175 (208)
T 2czd_A 126 ------EVAN------EIEPFGVIAPGTRPERIGYIRDRLKEGIKI-LAPGIGAQGGKAKDAV 175 (208)
T ss_dssp ------HHHH------HHCCSEEECCCSSTHHHHHHHHHSCTTCEE-EECCCCSSTTHHHHHH
T ss_pred ------HHHH------HhCCcEEEECCCChHHHHHHHHhCCCCeEE-EECCCCCCCCCHHHHH
Confidence 2344 6999999999998999999998765 3656 99999998 666653
No 35
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=99.45 E-value=5.4e-14 Score=124.06 Aligned_cols=194 Identities=15% Similarity=0.093 Sum_probs=113.3
Q ss_pred eeccccCcccHHHHHHHHHHcC--CCEEEEeccccccccCCCCCHHHHHHHHh-cCCCCeeeeeeeccCc---HHhHHHH
Q psy11600 10 PSILNSDLSNLHSESQNLLDSG--ADYLHLDVMDGTFVPNLTFGHPVVKCLRN-KIPKAFFETHMMVQNP---QQWIEPM 83 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~--~~~~h~DimDg~fvp~~~~g~~~v~~l~~-~~~~~~~d~Hlmv~~p---~~~i~~l 83 (277)
+=|+|+|+.+++++++.+++.+ ++|+|+ +.+.| ++||++.+++||+ .-..+++|+|+| .-| ..+++.+
T Consensus 14 ~lilAlD~~~~~~a~~~v~~~~~~v~~~Kv--g~~lf---~~~G~~~v~~l~~~~g~~v~lD~Kl~-DipnTv~~~~~~~ 87 (228)
T 3m47_A 14 RLILAMDLMNRDDALRVTGEVREYIDTVKI--GYPLV---LSEGMDIIAEFRKRFGCRIIADFKVA-DIPETNEKICRAT 87 (228)
T ss_dssp GEEEECCCCSHHHHHHHHHTTTTTCSEEEE--EHHHH---HHHCTHHHHHHHHHHCCEEEEEEEEC-SCHHHHHHHHHHH
T ss_pred CeEEEeCCCCHHHHHHHHHHcCCcccEEEE--cHHHH---HhcCHHHHHHHHhcCCCeEEEEEeec-ccHhHHHHHHHHH
Confidence 4589999999999999999887 899999 44677 5899999999998 445789999999 344 4499999
Q ss_pred HhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCcccee-e
Q psy11600 84 ADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLA-I 162 (277)
Q Consensus 84 ~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~-i 162 (277)
.++|+|++|+|.+.. .+.++... +.+++.|. ++- +
T Consensus 88 ~~~gad~vtvh~~~G---~~~l~~~~---------------------------------------~~~~~~g~--~v~vL 123 (228)
T 3m47_A 88 FKAGADAIIVHGFPG---ADSVRACL---------------------------------------NVAEEMGR--EVFLL 123 (228)
T ss_dssp HHTTCSEEEEESTTC---HHHHHHHH---------------------------------------HHHHHHTC--EEEEE
T ss_pred HhCCCCEEEEeccCC---HHHHHHHH---------------------------------------HHHHhcCC--CeEEE
Confidence 999999999998753 33333222 11111110 111 1
Q ss_pred CCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCC-ccEEEeCCCCcC--cHHHHHHccCCC---
Q psy11600 163 KPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPT-LNIEVDGGVGPN--TIDECAKCLTGF--- 236 (277)
Q Consensus 163 ~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~-~~i~vdGgV~~~--tv~~~~~~gpg~--- 236 (277)
..-++.+....+-+.++.+.-|+.++|..|.-.-....+.++.+++..+. +.+ |++||+.. |. ++.++|+++
T Consensus 124 t~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVv 201 (228)
T 3m47_A 124 TEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIV 201 (228)
T ss_dssp CCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSSCHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEE
T ss_pred EeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEE
Confidence 11111100000000001111122233322211100012345666665554 655 88998886 77 788899996
Q ss_pred CCcccc-cCHHHHHHHHHhh
Q psy11600 237 GGQKFM-QDMMPKVKWLREN 255 (277)
Q Consensus 237 ggq~F~-~~~~~kI~~l~~~ 255 (277)
|+..|. ++..+.++++++.
T Consensus 202 Gr~I~~a~dp~~a~~~~~~~ 221 (228)
T 3m47_A 202 GRSIYLADNPAAAAAGAIES 221 (228)
T ss_dssp CHHHHTSSCHHHHHHHHHHH
T ss_pred CHHHhCCCCHHHHHHHHHHH
Confidence 777777 5778888887764
No 36
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.39 E-value=3.2e-12 Score=111.26 Aligned_cols=181 Identities=9% Similarity=0.098 Sum_probs=116.9
Q ss_pred ceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCC--HHHHHHHHhcCCCCeeeeeeeccCcHHhHHHH
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFG--HPVVKCLRNKIPKAFFETHMMVQNPQQWIEPM 83 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g--~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l 83 (277)
+.|+||.++.| ++++ ++.+.+.|++++|+|.|| ++++ .+.++++++. + .+.+ |+|+.+ +++.+
T Consensus 20 ~~It~~~~~~~--~l~~-~~~~~~~G~~~v~lr~~~------~~~~~~~~~~~~l~~~-~-~~~~-~l~v~~---~~~~a 84 (221)
T 1yad_A 20 HAITDDSKPVE--ELAR-IIITIQNEVDFIHIRERS------KSAADILKLLDLIFEG-G-IDKR-KLVMNG---RVDIA 84 (221)
T ss_dssp EEECCSCSCHH--HHHH-HHHHHGGGCSEEEECCTT------SCHHHHHHHHHHHHHT-T-CCGG-GEEEES---CHHHH
T ss_pred EEEECCCcCcc--hHHH-HHHHHHCCCCEEEEccCC------CCHHHHHHHHHHHHHh-c-CcCC-eEEEeC---hHHHH
Confidence 45889999886 5644 788888999999999887 3444 6788999874 4 3566 999873 67888
Q ss_pred HhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeC
Q psy11600 84 ADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIK 163 (277)
Q Consensus 84 ~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~ 163 (277)
.++|+|.+|+|.+... . ...+.+.. |++.|+.+
T Consensus 85 ~~~gad~v~l~~~~~~--------------------------------------------~-~~~~~~~~-~~~ig~sv- 117 (221)
T 1yad_A 85 LFSTIHRVQLPSGSFS--------------------------------------------P-KQIRARFP-HLHIGRSV- 117 (221)
T ss_dssp HTTTCCEEEECTTSCC--------------------------------------------H-HHHHHHCT-TCEEEEEE-
T ss_pred HHcCCCEEEeCCCccC--------------------------------------------H-HHHHHHCC-CCEEEEEc-
Confidence 9999999988865322 1 11111111 33333333
Q ss_pred CCCCHHhHHHH-HhhcCceEEEEecCCCCCchh---hhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---
Q psy11600 164 PKTPVDVIAEY-IESADLVLIMTVEPGFGGQKF---MQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF--- 236 (277)
Q Consensus 164 p~t~~~~i~~~-i~~~d~vl~mav~Pgt~gq~~---~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~--- 236 (277)
.++ +..... ...+|+++++.+-|+ +.+ .+.-++.++++++.. ++.+.++|||+.+++.++.++|++.
T Consensus 118 -~t~-~~~~~a~~~gaD~i~~~~~f~~---~~~~g~~~~~~~~l~~~~~~~-~~pvia~GGI~~~nv~~~~~~Ga~gv~v 191 (221)
T 1yad_A 118 -HSL-EEAVQAEKEDADYVLFGHVFET---DCKKGLEGRGVSLLSDIKQRI-SIPVIAIGGMTPDRLRDVKQAGADGIAV 191 (221)
T ss_dssp -CSH-HHHHHHHHTTCSEEEEECCC-------------CHHHHHHHHHHHC-CSCEEEESSCCGGGHHHHHHTTCSEEEE
T ss_pred -CCH-HHHHHHHhCCCCEEEECCcccc---CCCCCCCCCCHHHHHHHHHhC-CCCEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 222 222222 334677766554222 111 122345666665544 6779999999999999999999985
Q ss_pred CCcccc-cCHHHHHHHHHh
Q psy11600 237 GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 237 ggq~F~-~~~~~kI~~l~~ 254 (277)
|+..|. ++..++++++++
T Consensus 192 gs~i~~~~d~~~~~~~~~~ 210 (221)
T 1yad_A 192 MSGIFSSAEPLEAARRYSR 210 (221)
T ss_dssp SHHHHTSSSHHHHHHHHHH
T ss_pred hHHhhCCCCHHHHHHHHHH
Confidence 666665 366788887765
No 37
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=99.38 E-value=6e-13 Score=118.40 Aligned_cols=161 Identities=11% Similarity=0.039 Sum_probs=108.5
Q ss_pred eeccCcHHhHHHHHhcC--CCeEEEeccCC-CCCHHHHHHHHhh-CCCcccc-----hh---hhhHHHHhcCCCeEEeec
Q psy11600 71 MMVQNPQQWIEPMADAN--VDQYTFHVEPV-DNVPQVIRQIKEA-GMKVGQV-----LQ---DWIEPMADANVDQYTFHV 138 (277)
Q Consensus 71 lmv~~p~~~i~~l~~ag--~d~i~~H~e~~-d~g~~~i~~i~~~-~~~~~d~-----p~---~~i~~~~~~g~d~it~H~ 138 (277)
+=..++++.++.+.+.| ++|+=+|+|.+ .+|+.+|+++|+. +..+.|+ |. .|++.++++|||++|||.
T Consensus 21 lD~~~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~~v~~lr~~~~~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~ 100 (245)
T 1eix_A 21 LDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHA 100 (245)
T ss_dssp ECCSSHHHHHHHHTTSCTTTCEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBG
T ss_pred ECCCCHHHHHHHHHHhCccCcEEEEcHHHHHHhCHHHHHHHHHCCCcEEEEeeccccHHHHHHHHHHHHhCCCCEEEEec
Confidence 33467888898888888 89966698875 5599999999998 4445554 65 599999999999999999
Q ss_pred CCCCChHH-HHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCc-e-EEEEecCCCCC-chhhhhh---hhhHHHHHhhCC
Q psy11600 139 EPVDNVPQ-VIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADL-V-LIMTVEPGFGG-QKFMQDM---MPKVKWLRENYP 211 (277)
Q Consensus 139 E~~~~~~~-~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~-v-l~mav~Pgt~g-q~~~~~~---l~kI~~l~~~~~ 211 (277)
| ...+ +.+.++.+ +..+. . .+++++|.|+. .+.+.++ ++..+.+.
T Consensus 101 ~---~g~~~l~~~~~~~---------------------~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl---- 152 (245)
T 1eix_A 101 S---GGARMMTAAREAL---------------------VPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAE---- 152 (245)
T ss_dssp G---GCHHHHHHHHHTT---------------------GGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHH----
T ss_pred c---CCHHHHHHHHHHH---------------------HHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHH----
Confidence 9 6666 44444432 22222 1 13455655442 1222222 12222221
Q ss_pred CccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCcc-----------CHHHhh
Q psy11600 212 TLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPN-----------TIDECA 276 (277)
Q Consensus 212 ~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~-----------~~~~~~ 276 (277)
.|+. ..|++|++.|...+.+ ++++|+..+...|+|||||+++ |+++++
T Consensus 153 -----------~ma~-----~~~~~G~~g~V~~~~e-i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~ 211 (245)
T 1eix_A 153 -----------RLAA-----LTQKCGLDGVVCSAQE-AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQAL 211 (245)
T ss_dssp -----------HHHH-----HHHHTTCSEEECCGGG-HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHH
T ss_pred -----------HHHH-----HHHHcCCCeEEeCHHH-HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHH
Confidence 1221 1467778889988887 8888887655679999999999 887664
No 38
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.36 E-value=1.6e-11 Score=106.06 Aligned_cols=180 Identities=12% Similarity=0.185 Sum_probs=120.9
Q ss_pred CCceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeec-----cCcHH
Q psy11600 4 VQCMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMV-----QNPQQ 78 (277)
Q Consensus 4 ~~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv-----~~p~~ 78 (277)
.+..|.|||++.|+.++.+.++.+.+.|++++|++.+|... .+.++.+++. +++|+++ .++ +
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~-------~~~i~~i~~~-----~~~~l~vg~g~~~~~-~ 71 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQW-------EQSIPAIVDA-----YGDKALIGAGTVLKP-E 71 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTH-------HHHHHHHHHH-----HTTTSEEEEECCCSH-H
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-------HHHHHHHHHh-----CCCCeEEEeccccCH-H
Confidence 35679999999999999999999999999999999998322 2566666654 2345666 344 4
Q ss_pred hHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCcc
Q psy11600 79 WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKV 158 (277)
Q Consensus 79 ~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~ 158 (277)
+++.+.++|+|.+ |....+ ..+.+.+++.|.+.
T Consensus 72 ~i~~a~~~Gad~V--~~~~~~---------------------------------------------~~~~~~~~~~g~~~ 104 (212)
T 2v82_A 72 QVDALARMGCQLI--VTPNIH---------------------------------------------SEVIRRAVGYGMTV 104 (212)
T ss_dssp HHHHHHHTTCCEE--ECSSCC---------------------------------------------HHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCCEE--EeCCCC---------------------------------------------HHHHHHHHHcCCCE
Confidence 7899999999999 654332 23334445444432
Q ss_pred ceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC-CccEEEeCCCCcCcHHHHHHccCCC-
Q psy11600 159 GLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVGPNTIDECAKCLTGF- 236 (277)
Q Consensus 159 g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV~~~tv~~~~~~gpg~- 236 (277)
-.+ +.++.+.....-..+|++. +.|+ + ..-+++++++++..+ ++.+.++|||+.+++.++.++|++.
T Consensus 105 ~~g--~~t~~e~~~a~~~G~d~v~---v~~t---~---~~g~~~~~~l~~~~~~~ipvia~GGI~~~~i~~~~~~Ga~gv 173 (212)
T 2v82_A 105 CPG--CATATEAFTALEAGAQALK---IFPS---S---AFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGA 173 (212)
T ss_dssp ECE--ECSHHHHHHHHHTTCSEEE---ETTH---H---HHCHHHHHHHHTTSCTTCEEEEESSCCTTTHHHHHHHTCSEE
T ss_pred Eee--cCCHHHHHHHHHCCCCEEE---EecC---C---CCCHHHHHHHHHhccCCCeEEEeCCCCHHHHHHHHHcCCCEE
Confidence 222 2232222222223356554 3442 1 123567777777666 6889999999999999999999885
Q ss_pred --CCccccc-----CHHHHHHHHHh
Q psy11600 237 --GGQKFMQ-----DMMPKVKWLRE 254 (277)
Q Consensus 237 --ggq~F~~-----~~~~kI~~l~~ 254 (277)
|+..|.. +..++++++++
T Consensus 174 ~vGsai~~~~~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 174 GLGSDLYRAGQSVERTAQQAAAFVK 198 (212)
T ss_dssp EECTTTCCTTCCHHHHHHHHHHHHH
T ss_pred EEChHHhCCCCCHHHHHHHHHHHHH
Confidence 6666664 56667777664
No 39
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=99.34 E-value=2.5e-12 Score=114.44 Aligned_cols=152 Identities=11% Similarity=0.116 Sum_probs=105.2
Q ss_pred ccCcHHhHHHHHhcC--CCeEEEeccCC-CCCHHHHHHHHhhC-CCcccc-----hhh---hhHHHHhcCCCeEEeecCC
Q psy11600 73 VQNPQQWIEPMADAN--VDQYTFHVEPV-DNVPQVIRQIKEAG-MKVGQV-----LQD---WIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 73 v~~p~~~i~~l~~ag--~d~i~~H~e~~-d~g~~~i~~i~~~~-~~~~d~-----p~~---~i~~~~~~g~d~it~H~E~ 140 (277)
..++++.++.+.+.| ++|+=+|+|.+ .+|+.+|+++|+.+ ..+.|+ |.. |++.++++|||++|||.|
T Consensus 13 ~~~l~~~~~~v~~~~~~v~~~Kv~~d~~~~~G~~~v~~lr~~~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~- 91 (246)
T 2yyu_A 13 FPSKQEVERFLRPFAGTPLFVKVGMELYYQEGPAIVAFLKEQGHAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAA- 91 (246)
T ss_dssp CSSHHHHHHHHGGGTTSCCEEEECHHHHHHHTHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGG-
T ss_pred CCCHHHHHHHHHHhcccccEEEeCHHHHHHhCHHHHHHHHHCCCeEEEEeecccchHHHHHHHHHHHhcCCCEEEEECC-
Confidence 457788888888887 58866698875 55999999999984 445554 666 999999999999999999
Q ss_pred CCChHHH-HHHHHHhCCccceeeCCCCCHHhHHHHHhh---cCce--EEEEecCCCCC-chhh-hhh---hhhHHHHHhh
Q psy11600 141 VDNVPQV-IRQIKEAGMKVGLAIKPKTPVDVIAEYIES---ADLV--LIMTVEPGFGG-QKFM-QDM---MPKVKWLREN 209 (277)
Q Consensus 141 ~~~~~~~-~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~---~d~v--l~mav~Pgt~g-q~~~-~~~---l~kI~~l~~~ 209 (277)
...+. .+.++.+ ++ .+.. .+++++|.|+. .+.+ .++ ++..+.+.
T Consensus 92 --~g~~~l~~~~~~~---------------------~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl-- 146 (246)
T 2yyu_A 92 --GGRRMMEAAIEGL---------------------DAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVA-- 146 (246)
T ss_dssp --GCHHHHHHHHHHH---------------------HHHSCSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHH--
T ss_pred --CCHHHHHHHHHHH---------------------HhhcccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHH--
Confidence 66663 4555443 22 2321 35789999874 1222 222 22222221
Q ss_pred CCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCC-CCeEEEeCCCCcc
Q psy11600 210 YPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVGPN 270 (277)
Q Consensus 210 ~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~-~~~I~VDGGI~~~ 270 (277)
.|+. ..+++|++.|.....+ ++++|+..+ .+ |+|||||+++
T Consensus 147 -------------~ma~-----~~~~~G~~g~V~~~~e-i~~lr~~~~~~~-i~V~gGI~~~ 188 (246)
T 2yyu_A 147 -------------HYAA-----LAKESGLDGVVCSANE-AAFIKERCGASF-LAVTPGIRFA 188 (246)
T ss_dssp -------------HHHH-----HHHHHTCCEEECCHHH-HHHHHHHHCTTS-EEEECCCCCC
T ss_pred -------------HHHH-----HHHHhCCCEEEeCHHH-HHHHHHhcCCCC-EEEeCCcCCC
Confidence 1221 1367778889998887 999988654 45 9999999999
No 40
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.34 E-value=3.3e-12 Score=111.33 Aligned_cols=159 Identities=11% Similarity=0.031 Sum_probs=109.9
Q ss_pred eeccCcHHhHHHHHh--cCCCeEEEeccC-CCCCHHHHHHHHhh-CCC--cc-----cchhhhhHHHHhcCCCeEEeecC
Q psy11600 71 MMVQNPQQWIEPMAD--ANVDQYTFHVEP-VDNVPQVIRQIKEA-GMK--VG-----QVLQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 71 lmv~~p~~~i~~l~~--ag~d~i~~H~e~-~d~g~~~i~~i~~~-~~~--~~-----d~p~~~i~~~~~~g~d~it~H~E 139 (277)
+=..++++.++.+.+ .|+|++.+++.. ..+|+.+|+++|+. +.. ++ +.|..|++.++++|||++|+|.|
T Consensus 13 lD~~~~~~~~~~~~~~~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~ 92 (218)
T 3jr2_A 13 LDQTNLTDAVAVASNVASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAA 92 (218)
T ss_dssp ECCSSHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETT
T ss_pred eCCCCHHHHHHHHHHhcCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecC
Confidence 334567776665543 478999777543 24589999999998 332 32 34899999999999999999998
Q ss_pred CCCChHH-HHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEE-EecCCCCCchhhhhhhhhHHHHHhhCCCccEEE
Q psy11600 140 PVDNVPQ-VIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIM-TVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEV 217 (277)
Q Consensus 140 ~~~~~~~-~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~m-av~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~v 217 (277)
...+ +.+.++. ++..+...++ .++|.|+ +.+..+.+. .++..+
T Consensus 93 ---~~~~~~~~~~~~---------------------~~~~g~~~~~d~l~~~T~---------~~~~~~~~~--g~d~v~ 137 (218)
T 3jr2_A 93 ---AHIATIAACKKV---------------------ADELNGEIQIEIYGNWTM---------QDAKAWVDL--GITQAI 137 (218)
T ss_dssp ---SCHHHHHHHHHH---------------------HHHHTCEEEEECCSSCCH---------HHHHHHHHT--TCCEEE
T ss_pred ---CCHHHHHHHHHH---------------------HHHhCCccceeeeecCCH---------HHHHHHHHc--Ccccee
Confidence 6544 3344443 4455555555 6788663 123344333 455443
Q ss_pred eCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 218 DGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 218 dGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
. .+++ .|+++||.|.+..+++|++++. +++.|.||||||++|++++.
T Consensus 138 ~----~~~~------~~~~~g~~~~~~~l~~i~~~~~--~~~pi~v~GGI~~~~~~~~~ 184 (218)
T 3jr2_A 138 Y----HRSR------DAELAGIGWTTDDLDKMRQLSA--LGIELSITGGIVPEDIYLFE 184 (218)
T ss_dssp E----ECCH------HHHHHTCCSCHHHHHHHHHHHH--TTCEEEEESSCCGGGGGGGT
T ss_pred e----eecc------ccccCCCcCCHHHHHHHHHHhC--CCCCEEEECCCCHHHHHHHH
Confidence 2 2333 3778899999999999999875 46789999999999998765
No 41
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.32 E-value=1.9e-11 Score=107.04 Aligned_cols=180 Identities=12% Similarity=0.061 Sum_probs=123.7
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCee---------eeeeeccCcHHhHHHHHhcCCC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFF---------ETHMMVQNPQQWIEPMADANVD 89 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~---------d~Hlmv~~p~~~i~~l~~ag~d 89 (277)
.+.+..+.+++.|++++|+| +++.++.+|+. +++|+ +.|+|+.++.++++.+.++|+|
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~------------~~~~i~~i~~~-~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad 103 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN------------SVRDIKEIQAI-TDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIA 103 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE------------SHHHHHHHHTT-CCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCS
T ss_pred hHHHHHHHHHHCCCcEeecC------------CHHHHHHHHHh-CCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCC
Confidence 77788889999999999986 67889999985 78888 6799999999999999999999
Q ss_pred eEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHH
Q psy11600 90 QYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVD 169 (277)
Q Consensus 90 ~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~ 169 (277)
.+++|.+...... .....++++.+++..-...++.++.|+-+
T Consensus 104 ~V~l~~~~~~~~~--------------------------------------~~~~~~~i~~i~~~~~~~~v~~~~~t~~e 145 (234)
T 1yxy_A 104 VIAMDCTKRDRHD--------------------------------------GLDIASFIRQVKEKYPNQLLMADISTFDE 145 (234)
T ss_dssp EEEEECCSSCCTT--------------------------------------CCCHHHHHHHHHHHCTTCEEEEECSSHHH
T ss_pred EEEEcccccCCCC--------------------------------------CccHHHHHHHHHHhCCCCeEEEeCCCHHH
Confidence 9999987643100 00234555566654111234445554433
Q ss_pred hHHHHHhhcCce--EEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCC-cCcHHHHHHccCCC---CCccccc
Q psy11600 170 VIAEYIESADLV--LIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKCLTGF---GGQKFMQ 243 (277)
Q Consensus 170 ~i~~~i~~~d~v--l~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~-~~tv~~~~~~gpg~---ggq~F~~ 243 (277)
....+-..+|++ .++.++|++. .+...-++.++++++. ++.+.++|||+ .+++..+.++|++. |+..|.
T Consensus 146 a~~a~~~Gad~i~~~v~g~~~~~~--~~~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~- 220 (234)
T 1yxy_A 146 GLVAHQAGIDFVGTTLSGYTPYSR--QEAGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR- 220 (234)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSC--CSSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC-
T ss_pred HHHHHHcCCCEEeeeccccCCCCc--CCCCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC-
Confidence 222223346777 5666677652 2333334556666654 78899999999 99999999999885 555554
Q ss_pred CHHHHHHHHHhh
Q psy11600 244 DMMPKVKWLREN 255 (277)
Q Consensus 244 ~~~~kI~~l~~~ 255 (277)
....++++++.
T Consensus 221 -p~~~~~~l~~~ 231 (234)
T 1yxy_A 221 -PKEIAERFIEA 231 (234)
T ss_dssp -HHHHHHHHHHH
T ss_pred -hHHHHHHHHHH
Confidence 45566666653
No 42
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=99.29 E-value=3.4e-12 Score=113.05 Aligned_cols=155 Identities=11% Similarity=0.100 Sum_probs=103.6
Q ss_pred ccCcHHhHHHHHhcC--CCeEEEeccCC-CCCHHHHHHHHhhC-CCcccc-----hh---hhhHHHHhcCCCeEEeecCC
Q psy11600 73 VQNPQQWIEPMADAN--VDQYTFHVEPV-DNVPQVIRQIKEAG-MKVGQV-----LQ---DWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 73 v~~p~~~i~~l~~ag--~d~i~~H~e~~-d~g~~~i~~i~~~~-~~~~d~-----p~---~~i~~~~~~g~d~it~H~E~ 140 (277)
..++++.++.+.+.| ++|+=+|+|.+ .+|+.+|+++|+.+ ..+.|+ |. .|++.++++|||++|||.|
T Consensus 12 ~~~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~~v~~l~~~~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~- 90 (239)
T 1dbt_A 12 FASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAA- 90 (239)
T ss_dssp CSSHHHHHHHTGGGTTSCCEEEECHHHHHHHTHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG-
T ss_pred CCCHHHHHHHHHHhcccCcEEEECHHHHHHhCHHHHHHHHHCCCcEEEEeccccchHHHHHHHHHHHhcCCCEEEEeCc-
Confidence 457888888888887 58966698875 55999999999984 445554 65 5999999999999999999
Q ss_pred CCChHHH-HHHHHHhCCccceeeCCCCCHHhHHHHHhhc---Cce--EEEEecCCCCCc-hhh-hhh-h--hhHHHHHhh
Q psy11600 141 VDNVPQV-IRQIKEAGMKVGLAIKPKTPVDVIAEYIESA---DLV--LIMTVEPGFGGQ-KFM-QDM-M--PKVKWLREN 209 (277)
Q Consensus 141 ~~~~~~~-~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~---d~v--l~mav~Pgt~gq-~~~-~~~-l--~kI~~l~~~ 209 (277)
...+. .++++. ++.. +.. .+++|++-|+.. +.+ .++ + +..+.+.
T Consensus 91 --~g~~~l~~~~~~---------------------~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~~~~~d~Vl-- 145 (239)
T 1dbt_A 91 --GGKKMMQAALEG---------------------LEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVV-- 145 (239)
T ss_dssp --GCHHHHHHHHHH---------------------HHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBCSCHHHHHH--
T ss_pred --CCHHHHHHHHHH---------------------HHhhhccCCCCccEEEEEEcCCCCHHHHHHHhccCCCHHHHHH--
Confidence 66664 344443 2333 331 134444544321 122 221 2 1122221
Q ss_pred CCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCH
Q psy11600 210 YPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTI 272 (277)
Q Consensus 210 ~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~ 272 (277)
.|+. ..+++|++.|.... ++++++|+..+...|+|||||++++.
T Consensus 146 -------------~ma~-----~~~~~G~~g~v~~~-~~i~~lr~~~~~~~i~v~gGI~~~~~ 189 (239)
T 1dbt_A 146 -------------HYSK-----QAEESGLDGVVCSV-HEAKAIYQAVSPSFLTVTPGIRMSED 189 (239)
T ss_dssp -------------HHHH-----HHHHTTCSEEECCG-GGHHHHTTTSCTTCEEEECCBCCTTS
T ss_pred -------------HHHH-----HHHHhCCCEEEECH-HHHHHHHHhcCCCcEEEeCCcCCCCC
Confidence 1221 13677788899887 89999998776567999999999987
No 43
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.26 E-value=6.2e-11 Score=103.65 Aligned_cols=204 Identities=16% Similarity=0.135 Sum_probs=135.1
Q ss_pred CCCCceEeeeccccCc----------------ccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCC
Q psy11600 2 SHVQCMIGPSILNSDL----------------SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKA 65 (277)
Q Consensus 2 ~~~~~~~~~s~~~~d~----------------~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~ 65 (277)
|++..+|.|+|---|= .+..+.++.+++.|+|++|++-+++.+ ++.....+.++++++. +++
T Consensus 1 ~~~~~~iip~id~~~g~~~~v~g~~~~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~-~~i 78 (253)
T 1h5y_A 1 SHMALRIIPCLDIDGGAKVVVKGVNFQGIREVGDPVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEA-VSI 78 (253)
T ss_dssp -CCBCEEEEEEEECGGGCEECTTCCCHHHHEEECHHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHH-CSS
T ss_pred CCCccEEEEEEEEcCCceEEEEcccccceeecccHHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHh-cCC
Confidence 4556677888764332 367788999999999999999999776 4445667889999986 689
Q ss_pred eeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChH
Q psy11600 66 FFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVP 145 (277)
Q Consensus 66 ~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~ 145 (277)
|+.+|.++.++++. +.+.++|+|.++++..... ++.
T Consensus 79 pvi~~g~i~~~~~~-~~~~~~Gad~V~i~~~~~~-------------------------------------------~~~ 114 (253)
T 1h5y_A 79 PVLVGGGVRSLEDA-TTLFRAGADKVSVNTAAVR-------------------------------------------NPQ 114 (253)
T ss_dssp CEEEESSCCSHHHH-HHHHHHTCSEEEESHHHHH-------------------------------------------CTH
T ss_pred CEEEECCCCCHHHH-HHHHHcCCCEEEEChHHhh-------------------------------------------CcH
Confidence 99999999999765 7778899999987755432 222
Q ss_pred HHHHHHHHhCCc---cceeeC--C---------------CCCHHhHHHHHhh-cCceEEEEecCCCCCchhhhhhhhhHH
Q psy11600 146 QVIRQIKEAGMK---VGLAIK--P---------------KTPVDVIAEYIES-ADLVLIMTVEPGFGGQKFMQDMMPKVK 204 (277)
Q Consensus 146 ~~~~~I~~~g~~---~g~~i~--p---------------~t~~~~i~~~i~~-~d~vl~mav~Pgt~gq~~~~~~l~kI~ 204 (277)
.+.+.++..|.. .++.++ | .++.+.+..+.+. +|.+.++.++|++.++.+. ++.++
T Consensus 115 ~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~---~~~i~ 191 (253)
T 1h5y_A 115 LVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGYD---VELIR 191 (253)
T ss_dssp HHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCC---HHHHH
T ss_pred HHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcCC---HHHHH
Confidence 233333443321 121111 0 1334444444444 7889999999876655553 34455
Q ss_pred HHHhhCCCccEEEeCCCCc-CcHHHHHHccCCC---CCccccc-CHHHHH-HHHHhh
Q psy11600 205 WLRENYPTLNIEVDGGVGP-NTIDECAKCLTGF---GGQKFMQ-DMMPKV-KWLREN 255 (277)
Q Consensus 205 ~l~~~~~~~~i~vdGgV~~-~tv~~~~~~gpg~---ggq~F~~-~~~~kI-~~l~~~ 255 (277)
++++.. ++.+.+.|||+- +++.++.++|++. |+..+.. ...+.+ +++++.
T Consensus 192 ~l~~~~-~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l~~~ 247 (253)
T 1h5y_A 192 RVADSV-RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYLKER 247 (253)
T ss_dssp HHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHHT
T ss_pred HHHHhc-CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHHHHc
Confidence 555543 678999999994 8999999888885 5555543 234443 445443
No 44
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.22 E-value=8.1e-11 Score=102.16 Aligned_cols=191 Identities=16% Similarity=0.060 Sum_probs=124.8
Q ss_pred ceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCC--HHHHHHHHhcCCCCeeeeeeeccCcHHhHHHH
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFG--HPVVKCLRNKIPKAFFETHMMVQNPQQWIEPM 83 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g--~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l 83 (277)
|-|+|+.++.|. +.+.++.+.+.|+|++|++.+|+. +..++ .+.++.+++. +. ...+|+++. ++++.+
T Consensus 21 ~~It~~~~~~~~--~~~~~~~~~~~G~~~i~l~~~~~~---~~~~~~~~~~~~~l~~~-~~-~~~v~v~v~---~~~~~a 90 (227)
T 2tps_A 21 YFIMGSNNTKAD--PVTVVQKALKGGATLYQFREKGGD---ALTGEARIKFAEKAQAA-CR-EAGVPFIVN---DDVELA 90 (227)
T ss_dssp EEEECGGGCSSC--HHHHHHHHHHHTCSEEEECCCSTT---CCCHHHHHHHHHHHHHH-HH-HHTCCEEEE---SCHHHH
T ss_pred EEEECCccccch--HHHHHHHHHHCCCCEEEEecCCCC---HhHHHHHHHHHHHHHHH-HH-HcCCeEEEc---CHHHHH
Confidence 568999988776 888999999999999999999864 23454 3556666653 22 356788885 356788
Q ss_pred HhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeC
Q psy11600 84 ADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIK 163 (277)
Q Consensus 84 ~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~ 163 (277)
.++|+|.+ |+...+. . +.+..+..|. .-+++.
T Consensus 91 ~~~gad~v--~l~~~~~------------------------------------------~---~~~~~~~~g~-~~~~~s 122 (227)
T 2tps_A 91 LNLKADGI--HIGQEDA------------------------------------------N---AKEVRAAIGD-MILGVS 122 (227)
T ss_dssp HHHTCSEE--EECTTSS------------------------------------------C---HHHHHHHHTT-SEEEEE
T ss_pred HHcCCCEE--EECCCcc------------------------------------------C---HHHHHHhcCC-cEEEEe
Confidence 88999999 6543331 1 1111122342 233444
Q ss_pred CCCCHHhHHHHHhhcCceEEEEecCCCCCch-hhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---CCc
Q psy11600 164 PKTPVDVIAEYIESADLVLIMTVEPGFGGQK-FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF---GGQ 239 (277)
Q Consensus 164 p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~-~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~---ggq 239 (277)
+.++.+....+-..+|+++++.+.|....+. +.+.-++.++++++..+++.+.+.|||+.+++.++.++|++. |+.
T Consensus 123 ~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~ 202 (227)
T 2tps_A 123 AHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISA 202 (227)
T ss_dssp ECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSEEEESHH
T ss_pred cCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCEEEEhHH
Confidence 4444332222223478887776777543332 233346667777765545789999999999999999999885 666
Q ss_pred ccc-cCHHHHHHHHHh
Q psy11600 240 KFM-QDMMPKVKWLRE 254 (277)
Q Consensus 240 ~F~-~~~~~kI~~l~~ 254 (277)
.+. ++..++++++++
T Consensus 203 i~~~~d~~~~~~~~~~ 218 (227)
T 2tps_A 203 ISQAEDPESAARKFRE 218 (227)
T ss_dssp HHTSSCHHHHHHHHHH
T ss_pred hhcCCCHHHHHHHHHH
Confidence 665 466688887765
No 45
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.21 E-value=3.5e-10 Score=98.10 Aligned_cols=180 Identities=9% Similarity=0.100 Sum_probs=120.8
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCee---------eeeeeccCcHHhHHHHHhc
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFF---------ETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~---------d~Hlmv~~p~~~i~~l~~a 86 (277)
+.....+-.+.+++.|++++|+| +++.++++|+. +++|+ +.|+|+.++.++++.+.++
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~~------------~~~~i~~i~~~-~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~ 87 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRAN------------TKEDILAIKET-VDLPVIGIVKRDYDHSDVFITATSKEVDELIES 87 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE------------SHHHHHHHHHH-CCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCeeeccC------------CHHHHHHHHHh-cCCCEEeeeccCCCccccccCCcHHHHHHHHhC
Confidence 33456677788889999999985 67889999986 78888 6799999999999999999
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHh--CCccceeeCC
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEA--GMKVGLAIKP 164 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~--g~~~g~~i~p 164 (277)
|+|.+++|.+..... + + +..++++.+++. |+.. +.++
T Consensus 88 Gad~v~l~~~~~~~p-----------------------------------~-~---~~~~~i~~~~~~~~~~~v--~~~~ 126 (223)
T 1y0e_A 88 QCEVIALDATLQQRP-----------------------------------K-E---TLDELVSYIRTHAPNVEI--MADI 126 (223)
T ss_dssp TCSEEEEECSCSCCS-----------------------------------S-S---CHHHHHHHHHHHCTTSEE--EEEC
T ss_pred CCCEEEEeeecccCc-----------------------------------c-c---CHHHHHHHHHHhCCCceE--EecC
Confidence 999999998764310 0 0 334556666665 4333 3344
Q ss_pred CCCHHhHHHHHhhcCceEEEEecCCCCCchhh----hhhhhhHHHHHhhCCCccEEEeCCC-CcCcHHHHHHccCCC---
Q psy11600 165 KTPVDVIAEYIESADLVLIMTVEPGFGGQKFM----QDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKCLTGF--- 236 (277)
Q Consensus 165 ~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~----~~~l~kI~~l~~~~~~~~i~vdGgV-~~~tv~~~~~~gpg~--- 236 (277)
.++-+ ... +...+.-.+++.++|+.++++. ..-++.++++++.. ++.+.++||| +.+++..+.++|++.
T Consensus 127 ~t~~e-~~~-~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 127 ATVEE-AKN-AARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRVMDLGVHCSVV 203 (223)
T ss_dssp SSHHH-HHH-HHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHH-HHH-HHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHHHHcCCCEEEE
Confidence 44332 222 3333444445556666554442 23344555665544 6889999999 999999999999885
Q ss_pred CCcccccCHHHHHHHHHh
Q psy11600 237 GGQKFMQDMMPKVKWLRE 254 (277)
Q Consensus 237 ggq~F~~~~~~kI~~l~~ 254 (277)
|+..|. .....+++++
T Consensus 204 G~al~~--p~~~~~~~~~ 219 (223)
T 1y0e_A 204 GGAITR--PKEITKRFVQ 219 (223)
T ss_dssp CHHHHC--HHHHHHHHHH
T ss_pred ChHHcC--cHHHHHHHHH
Confidence 656554 3445555554
No 46
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.20 E-value=1.4e-10 Score=99.64 Aligned_cols=185 Identities=14% Similarity=0.144 Sum_probs=115.2
Q ss_pred ceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCC--HHHHHHHHhcCCCCeeeeeeeccCcHHhHHHH
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFG--HPVVKCLRNKIPKAFFETHMMVQNPQQWIEPM 83 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g--~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l 83 (277)
+.|+||. +. ++.+.++.+.+.|++++|++. |+.++. .+.++.+++. ++ ...+|+++. ++++.+
T Consensus 18 ~~It~~~-~~---~~~~~~~~~~~~G~~~i~l~~------~~~~~~~~~~~~~~l~~~-~~-~~~v~v~v~---~~~~~a 82 (215)
T 1xi3_A 18 YVITDRR-LK---PEVESVREALEGGATAIQMRI------KNAPTREMYEIGKTLRQL-TR-EYDALFFVD---DRVDVA 82 (215)
T ss_dssp EEECCTT-TS---CHHHHHHHHHHTTCSEEEECC------CSCCHHHHHHHHHHHHHH-HH-HTTCEEEEE---SCHHHH
T ss_pred EEEECCc-hh---hHHHHHHHHHHCCCCEEEECC------CCCCHHHHHHHHHHHHHH-HH-HcCCeEEEc---ChHHHH
Confidence 4588887 55 888999999999999999985 333332 5666677653 22 356788885 456788
Q ss_pred HhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeC
Q psy11600 84 ADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIK 163 (277)
Q Consensus 84 ~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~ 163 (277)
.++|+|.+ |+...+. ... ..+.+. .+.. .++.
T Consensus 83 ~~~gad~v--~l~~~~~------------------------------------------~~~-~~~~~~-~~~~--~~v~ 114 (215)
T 1xi3_A 83 LAVDADGV--QLGPEDM------------------------------------------PIE-VAKEIA-PNLI--IGAS 114 (215)
T ss_dssp HHHTCSEE--EECTTSC------------------------------------------CHH-HHHHHC-TTSE--EEEE
T ss_pred HHcCCCEE--EECCccC------------------------------------------CHH-HHHHhC-CCCE--EEEe
Confidence 88999999 4443331 111 111111 2222 2222
Q ss_pred CCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---CCcc
Q psy11600 164 PKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF---GGQK 240 (277)
Q Consensus 164 p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~---ggq~ 240 (277)
+.++.+....+-..+|+++++.+.|+.+.+.+...-++.++++++.. ++.+.+.|||+.+++.++.++|++. |+..
T Consensus 115 ~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i 193 (215)
T 1xi3_A 115 VYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV-KIPVVAIGGINKDNAREVLKTGVDGIAVISAV 193 (215)
T ss_dssp ESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC-SSCEEEESSCCTTTHHHHHTTTCSEEEESHHH
T ss_pred cCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC-CCCEEEECCcCHHHHHHHHHcCCCEEEEhHHH
Confidence 33333322222234788877776665433333334456666666544 6789999999999999999999885 5555
Q ss_pred cc-cCHHHHHHHHHh
Q psy11600 241 FM-QDMMPKVKWLRE 254 (277)
Q Consensus 241 F~-~~~~~kI~~l~~ 254 (277)
+. ++..++++++++
T Consensus 194 ~~~~d~~~~~~~~~~ 208 (215)
T 1xi3_A 194 MGAEDVRKATEELRK 208 (215)
T ss_dssp HTSSSHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHH
Confidence 55 466678888765
No 47
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=99.19 E-value=2.7e-11 Score=105.32 Aligned_cols=154 Identities=9% Similarity=-0.020 Sum_probs=97.5
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhh---CCCcccc-----hhhhhHHHHhcCCCeEEeecC
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEA---GMKVGQV-----LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~---~~~~~d~-----p~~~i~~~~~~g~d~it~H~E 139 (277)
..++++.++.+.+.|. +++ .++++++ |+.+|+++|+. +..+.|+ |..|++.++++|||++|+|.|
T Consensus 12 ~~~~~~~~~~~~~~~~-~v~-~~kv~~~~f~~~G~~~i~~l~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~ 89 (216)
T 1q6o_A 12 NQTMDSAYETTRLIAE-EVD-IIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICC 89 (216)
T ss_dssp CSSHHHHHHHHHHHGG-GCS-EEEECHHHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETT
T ss_pred CCCHHHHHHHHHHhcc-cCC-EEEECHHHHHHhCHHHHHHHHHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEecc
Confidence 4567788888877763 321 1355654 99999999998 3334443 999999999999999999999
Q ss_pred CCCChHH-HHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEec-CCCCCchhhhhhhhhHHHHHhhCCCccEEE
Q psy11600 140 PVDNVPQ-VIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVE-PGFGGQKFMQDMMPKVKWLRENYPTLNIEV 217 (277)
Q Consensus 140 ~~~~~~~-~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~-Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~v 217 (277)
...+ +.+.++. +++.+...++.+. +-|+ ...+.+.++ ...++.+
T Consensus 90 ---~g~~~l~~~~~~---------------------~~~~g~~~~~~ll~~~t~---------~~~~~l~~~-~~~~~vl 135 (216)
T 1q6o_A 90 ---ADINTAKGALDV---------------------AKEFNGDVQIELTGYWTW---------EQAQQWRDA-GIGQVVY 135 (216)
T ss_dssp ---SCHHHHHHHHHH---------------------HHHTTCEEEEEECSCCCH---------HHHHHHHHT-TCCEEEE
T ss_pred ---CCHHHHHHHHHH---------------------HHHcCCCceeeeeeCCCh---------hhHHHHHhc-CcHHHHH
Confidence 6655 3333332 3334444433222 2110 123344333 2233433
Q ss_pred eCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCC-CCeEEEeCCCCccCHHHhh
Q psy11600 218 DGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 218 dGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~-~~~I~VDGGI~~~~~~~~~ 276 (277)
-- -.+++ +||++| +.++++++|+..+ .+.|.||||||++|+++++
T Consensus 136 ~~--a~~~~------~~G~~g------~~~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~ 181 (216)
T 1q6o_A 136 HR--SRDAQ------AAGVAW------GEADITAIKRLSDMGFKVTVTGGLALEDLPLFK 181 (216)
T ss_dssp EC--CHHHH------HTTCCC------CHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGT
T ss_pred HH--HHHHH------hcCCCC------CHHHHHHHHHhcCCCCcEEEECCcChhhHHHHH
Confidence 11 12344 699877 4678888887653 6779999999999987765
No 48
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.19 E-value=7e-10 Score=99.67 Aligned_cols=171 Identities=13% Similarity=0.146 Sum_probs=119.4
Q ss_pred HHHHHhcCCCCeeeeeeeccCc--HH---hHHHHHhcCCCeEEEeccC------CCC-------------------CHHH
Q psy11600 55 VKCLRNKIPKAFFETHMMVQNP--QQ---WIEPMADANVDQYTFHVEP------VDN-------------------VPQV 104 (277)
Q Consensus 55 v~~l~~~~~~~~~d~Hlmv~~p--~~---~i~~l~~ag~d~i~~H~e~------~d~-------------------g~~~ 104 (277)
.+++|+. -+..+-.+++..+| ++ .++.+.++|+|++ |+++ +|| ++.+
T Consensus 8 f~~~~~~-~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~i--eig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~ 84 (268)
T 1qop_A 8 FAQLNDR-REGAFVPFVTLGDPGIEQSLKIIDTLIDAGADAL--ELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEM 84 (268)
T ss_dssp HHHHHHT-TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSE--EEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHhc-CCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEE--EECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHH
Confidence 3455543 35578889999998 43 4777888999999 5554 444 3467
Q ss_pred HHHHHhh-CCCcc-cc----h------hhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHH
Q psy11600 105 IRQIKEA-GMKVG-QV----L------QDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIA 172 (277)
Q Consensus 105 i~~i~~~-~~~~~-d~----p------~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~ 172 (277)
++++|+. +..|+ -+ | ++|++.++++|+|.+++|-+ ...+..++ .
T Consensus 85 v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~---~~e~~~~~---------------------~ 140 (268)
T 1qop_A 85 LAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADV---PVEESAPF---------------------R 140 (268)
T ss_dssp HHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTC---CGGGCHHH---------------------H
T ss_pred HHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCC---CHHHHHHH---------------------H
Confidence 9999988 65554 22 4 78999999999999999977 65443333 3
Q ss_pred HHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCc--ccccCHHHHHH
Q psy11600 173 EYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQ--KFMQDMMPKVK 250 (277)
Q Consensus 173 ~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq--~F~~~~~~kI~ 250 (277)
+.++..++..+..++|.++. ++++.+.+....+... +++ .|++|+ .|.++..++|+
T Consensus 141 ~~~~~~g~~~i~l~~p~t~~--------~~i~~i~~~~~g~v~~-------~s~-------~G~tG~~~~~~~~~~~~i~ 198 (268)
T 1qop_A 141 QAALRHNIAPIFICPPNADD--------DLLRQVASYGRGYTYL-------LSR-------SGVTGAENRGALPLHHLIE 198 (268)
T ss_dssp HHHHHTTCEEECEECTTCCH--------HHHHHHHHHCCSCEEE-------ESS-------SSCCCSSSCC--CCHHHHH
T ss_pred HHHHHcCCcEEEEECCCCCH--------HHHHHHHhhCCCcEEE-------Eec-------CCcCCCccCCCchHHHHHH
Confidence 45666666666777898762 3455555555554322 232 577776 67788899999
Q ss_pred HHHhhCCCCeEEEeCCCC-ccCHHHh
Q psy11600 251 WLRENYPTLNIEVDGGVG-PNTIDEC 275 (277)
Q Consensus 251 ~l~~~~~~~~I~VDGGI~-~~~~~~~ 275 (277)
++|+.. ++.|.|||||+ +++++++
T Consensus 199 ~lr~~~-~~pi~vggGI~t~e~~~~~ 223 (268)
T 1qop_A 199 KLKEYH-AAPALQGFGISSPEQVSAA 223 (268)
T ss_dssp HHHHTT-CCCEEEESSCCSHHHHHHH
T ss_pred HHHhcc-CCcEEEECCCCCHHHHHHH
Confidence 999875 57799999999 8998873
No 49
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.14 E-value=1.8e-10 Score=101.71 Aligned_cols=187 Identities=14% Similarity=0.146 Sum_probs=127.0
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPV 98 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~ 98 (277)
+..+..+.+++.|+|++|++-+|+.|. +..+..+.++++++. +++|+.+|-++.+|++ ++.+.++|+|.++++.+..
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~-~~ipvi~~ggI~~~~~-~~~~~~~Gad~V~lg~~~l 107 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVE-KRKTMLELVEKVAEQ-IDIPFTVGGGIHDFET-ASELILRGADKVSINTAAV 107 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSS-HHHHHHHHHHHHHTT-CCSCEEEESSCCSHHH-HHHHHHTTCSEEEESHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhc-CCcccHHHHHHHHHh-CCCCEEEeCCCCCHHH-HHHHHHcCCCEEEEChHHH
Confidence 455566788899999999999998875 455677889999985 7999999999988865 7888889999998776654
Q ss_pred CCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCc-cceeeCCC------------
Q psy11600 99 DNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMK-VGLAIKPK------------ 165 (277)
Q Consensus 99 d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~-~g~~i~p~------------ 165 (277)
. ++..+.+.++..|.. ..+++.+.
T Consensus 108 ~-------------------------------------------~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g 144 (253)
T 1thf_D 108 E-------------------------------------------NPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYS 144 (253)
T ss_dssp H-------------------------------------------CTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETT
T ss_pred h-------------------------------------------ChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECC
Confidence 3 233344444444431 23444442
Q ss_pred -------CCHHhHHHHHhh-cCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCc-CcHHHHHHccCCC
Q psy11600 166 -------TPVDVIAEYIES-ADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKCLTGF 236 (277)
Q Consensus 166 -------t~~~~i~~~i~~-~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~-~tv~~~~~~gpg~ 236 (277)
++.+.+..+.+. ++.+++++++++...+.+..+ .++++++.. ++.+...|||+- +++..+.++|++.
T Consensus 145 ~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~---~~~~l~~~~-~ipvia~GGI~~~~d~~~~~~~Gadg 220 (253)
T 1thf_D 145 GKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTE---MIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADA 220 (253)
T ss_dssp TTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHH---HHHHHGGGC-CSCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHH---HHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCChH
Confidence 233444444444 677888888887555554433 444444433 677999999995 9999999988885
Q ss_pred ---CCccccc--CHHHHHHHHHhh
Q psy11600 237 ---GGQKFMQ--DMMPKVKWLREN 255 (277)
Q Consensus 237 ---ggq~F~~--~~~~kI~~l~~~ 255 (277)
|+..+.. +.-+.++.+++.
T Consensus 221 v~vGsal~~~~~~~~~~~~~l~~~ 244 (253)
T 1thf_D 221 ALAASVFHFREIDVRELKEYLKKH 244 (253)
T ss_dssp EEESHHHHTTCSCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHc
Confidence 5554543 344445556554
No 50
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.12 E-value=8.1e-10 Score=94.96 Aligned_cols=157 Identities=17% Similarity=0.083 Sum_probs=103.1
Q ss_pred ccCcHHhHHHHHhc--CCCeEEEeccC-CCCCHHHHHHHHhh-CCCcccc-------hhhhhHHHHhcCCCeEEeecCCC
Q psy11600 73 VQNPQQWIEPMADA--NVDQYTFHVEP-VDNVPQVIRQIKEA-GMKVGQV-------LQDWIEPMADANVDQYTFHVEPV 141 (277)
Q Consensus 73 v~~p~~~i~~l~~a--g~d~i~~H~e~-~d~g~~~i~~i~~~-~~~~~d~-------p~~~i~~~~~~g~d~it~H~E~~ 141 (277)
..++++.++.+.+. |+|++-+-..- ..+|++.|+++|+. +..++.. +..+++.++++|+|.+++|.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~diie~G~p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~-- 86 (211)
T 3f4w_A 9 ELTLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGV-- 86 (211)
T ss_dssp SCCHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETT--
T ss_pred CCCHHHHHHHHHHhhcCccEEEeCcHHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCC--
Confidence 34667766666554 44544221111 23489999999998 4555532 444599999999999999998
Q ss_pred CCh-HHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEE-ecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeC
Q psy11600 142 DNV-PQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMT-VEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDG 219 (277)
Q Consensus 142 ~~~-~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~ma-v~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdG 219 (277)
.. .++.+.++ .++..+..+++. ++|.++ .+.++.+.+...++ +.+
T Consensus 87 -~~~~~~~~~~~---------------------~~~~~g~~~~v~~~~~~t~--------~~~~~~~~~~g~d~-i~v-- 133 (211)
T 3f4w_A 87 -TDVLTIQSCIR---------------------AAKEAGKQVVVDMICVDDL--------PARVRLLEEAGADM-LAV-- 133 (211)
T ss_dssp -SCHHHHHHHHH---------------------HHHHHTCEEEEECTTCSSH--------HHHHHHHHHHTCCE-EEE--
T ss_pred -CChhHHHHHHH---------------------HHHHcCCeEEEEecCCCCH--------HHHHHHHHHcCCCE-EEE--
Confidence 54 33333333 445556655554 456542 23344444443332 222
Q ss_pred CCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhhC
Q psy11600 220 GVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAK 277 (277)
Q Consensus 220 gV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~~ 277 (277)
+||++|+.|.+..+++++++++..++..+.++||||++|++++.+
T Consensus 134 -------------~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~ 178 (211)
T 3f4w_A 134 -------------HTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYAL 178 (211)
T ss_dssp -------------ECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHT
T ss_pred -------------cCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHH
Confidence 488888888776789999999887778899999999999987753
No 51
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.11 E-value=6.6e-10 Score=97.92 Aligned_cols=163 Identities=8% Similarity=0.102 Sum_probs=112.0
Q ss_pred CCeeeeeeeccCcH--H---hHHHHHhcCCCeEEEecc------CCCC-------------------CHHHHHHHHhhCC
Q psy11600 64 KAFFETHMMVQNPQ--Q---WIEPMADANVDQYTFHVE------PVDN-------------------VPQVIRQIKEAGM 113 (277)
Q Consensus 64 ~~~~d~Hlmv~~p~--~---~i~~l~~ag~d~i~~H~e------~~d~-------------------g~~~i~~i~~~~~ 113 (277)
+..+..+++..+|. + .++.+.++ +|++ |++ .+|| +..+++++|+.+.
T Consensus 4 ~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~i--el~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~ 80 (248)
T 1geq_A 4 DGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAI--ELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS 80 (248)
T ss_dssp TTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCE--EEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC
T ss_pred CccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEE--EECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC
Confidence 34688999999994 3 46677778 9999 666 5665 2678999999876
Q ss_pred Ccccc-----h------hhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceE
Q psy11600 114 KVGQV-----L------QDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVL 182 (277)
Q Consensus 114 ~~~d~-----p------~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl 182 (277)
.|+.+ | +++++.+.++|||.+++|.+ ...+..++ .++++..+...
T Consensus 81 ~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~---~~~~~~~~---------------------~~~~~~~g~~~ 136 (248)
T 1geq_A 81 TPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDL---PVFHAKEF---------------------TEIAREEGIKT 136 (248)
T ss_dssp CCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTC---CGGGHHHH---------------------HHHHHHHTCEE
T ss_pred CCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCC---ChhhHHHH---------------------HHHHHHhCCCe
Confidence 65432 5 78999999999999999988 76554433 34556667777
Q ss_pred EEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcc--cccCHHHHHHHHHhhCCCCe
Q psy11600 183 IMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQK--FMQDMMPKVKWLRENYPTLN 260 (277)
Q Consensus 183 ~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~--F~~~~~~kI~~l~~~~~~~~ 260 (277)
++.++|.++. +.++.+....+.+... +++ +|+.|+. |.+..+++++++++.. ++.
T Consensus 137 ~~~i~~~t~~--------e~~~~~~~~~d~~i~~-------~~~-------~G~~g~~~~~~~~~~~~i~~l~~~~-~~p 193 (248)
T 1geq_A 137 VFLAAPNTPD--------ERLKVIDDMTTGFVYL-------VSL-------YGTTGAREEIPKTAYDLLRRAKRIC-RNK 193 (248)
T ss_dssp EEEECTTCCH--------HHHHHHHHHCSSEEEE-------ECC-------C-------CCCHHHHHHHHHHHHHC-SSC
T ss_pred EEEECCCCHH--------HHHHHHHhcCCCeEEE-------EEC-------CccCCCCCCCChhHHHHHHHHHhhc-CCC
Confidence 7888998762 2344444333322211 121 6665554 6677889999999875 577
Q ss_pred EEEeCCCCc-cCHHHhh
Q psy11600 261 IEVDGGVGP-NTIDECA 276 (277)
Q Consensus 261 I~VDGGI~~-~~~~~~~ 276 (277)
|.++|||+. ++++++.
T Consensus 194 i~~~GGI~~~e~i~~~~ 210 (248)
T 1geq_A 194 VAVGFGVSKREHVVSLL 210 (248)
T ss_dssp EEEESCCCSHHHHHHHH
T ss_pred EEEEeecCCHHHHHHHH
Confidence 999999998 9988763
No 52
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=99.06 E-value=5e-10 Score=98.11 Aligned_cols=159 Identities=9% Similarity=0.037 Sum_probs=100.0
Q ss_pred eeccCcHHhHHHHHhcC--CCeEEEeccC-CCCCHHHHHHHHhhC---CCccc-----chhhhhHHHHhcCCCeEEeecC
Q psy11600 71 MMVQNPQQWIEPMADAN--VDQYTFHVEP-VDNVPQVIRQIKEAG---MKVGQ-----VLQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 71 lmv~~p~~~i~~l~~ag--~d~i~~H~e~-~d~g~~~i~~i~~~~---~~~~d-----~p~~~i~~~~~~g~d~it~H~E 139 (277)
|=+.+.++.++.+.+.| ++|+.++.+. ..+|+.+|+++|+.. ..+.| .|..+.+.++++|||++|+|.+
T Consensus 12 lD~~~~~~a~~~~~~~~~~~~~ikvg~~lf~~~G~~~v~~l~~~~p~~~iflDlKl~Dip~t~~~~~~~~Gad~vtVH~~ 91 (221)
T 3exr_A 12 LDHSNLKGAITAAVSVGNEVDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICS 91 (221)
T ss_dssp ECCSSHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHTTTCSEEEEETT
T ss_pred eCCCCHHHHHHHHHhhCCCceEEEECHHHHHhcCHHHHHHHHHhCCCCcEEEEEEeeccHHHHHHHHHHcCCCEEEEecc
Confidence 44567777777777766 6777554332 234999999999872 22444 4999999999999999999998
Q ss_pred CCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcC---ceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCc-cE
Q psy11600 140 PVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESAD---LVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTL-NI 215 (277)
Q Consensus 140 ~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d---~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~-~i 215 (277)
...+.++...+ .++..+ .+++++++|.++. +.++++.+. .+ ++
T Consensus 92 ---~g~~~l~~a~~--------------------~~~~~g~~~~~~~Vt~lts~~~--------~~~~~~~~~--~~~~~ 138 (221)
T 3exr_A 92 ---ATIPTMKAARK--------------------AIEDINPDKGEIQVELYGDWTY--------DQAQQWLDA--GISQA 138 (221)
T ss_dssp ---SCHHHHHHHHH--------------------HHHHHCTTTCEEEEECCSSCCH--------HHHHHHHHT--TCCEE
T ss_pred ---CCHHHHHHHHH--------------------HHHhcCCCcceEEEEEcCCCCH--------HHHHHHHcC--CHHHH
Confidence 66554433322 233333 6788999998862 223333221 23 23
Q ss_pred EEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhC-CCCeEEEeCCCCccCHHHhh
Q psy11600 216 EVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENY-PTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 216 ~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~-~~~~I~VDGGI~~~~~~~~~ 276 (277)
.+-.+.. +++.|+. .+.++++.+|+.. +++.|+||||||++|++.++
T Consensus 139 v~~~a~~-----------~~~~Gvv---~s~~e~~~ir~~~~~~~~i~v~gGI~~~~~~~~~ 186 (221)
T 3exr_A 139 IYHQSRD-----------ALLAGET---WGEKDLNKVKKLIEMGFRVSVTGGLSVDTLKLFE 186 (221)
T ss_dssp EEECCHH-----------HHHHTCC---CCHHHHHHHHHHHHHTCEEEEESSCCGGGGGGGT
T ss_pred HHHHHHh-----------cCCCccc---cCHHHHHHHHHhhcCCceEEEECCCCHHHHHHHH
Confidence 3322221 2233443 2345566666543 36789999999999988764
No 53
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.02 E-value=1.1e-09 Score=93.97 Aligned_cols=154 Identities=13% Similarity=0.008 Sum_probs=97.1
Q ss_pred cCcHHhHHHHHhc--CCCeEEEeccC-CCCCHHHHHHHHhhC-CCccc-------chhhhhHHHHhcCCCeEEeecCCCC
Q psy11600 74 QNPQQWIEPMADA--NVDQYTFHVEP-VDNVPQVIRQIKEAG-MKVGQ-------VLQDWIEPMADANVDQYTFHVEPVD 142 (277)
Q Consensus 74 ~~p~~~i~~l~~a--g~d~i~~H~e~-~d~g~~~i~~i~~~~-~~~~d-------~p~~~i~~~~~~g~d~it~H~E~~~ 142 (277)
.++++.++.+.+. |++++.+.... ...|+.+|+++|+.+ ..+++ .|..|++.+.++|||.+++|.+
T Consensus 10 ~~~~~~~~~~~~~~~~v~~iev~~~~~~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~--- 86 (207)
T 3ajx_A 10 LSTEAALELAGKVAEYVDIIELGTPLIKAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTVLGS--- 86 (207)
T ss_dssp SCHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETT---
T ss_pred CCHHHHHHHHHHhhccCCEEEECcHHHHhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEEecc---
Confidence 4566665555433 66988554331 234899999999985 44433 2888999999999999999998
Q ss_pred ChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEe-cCCCCCchhhhhhhhhHHHHHhhCCCccEE-EeCC
Q psy11600 143 NVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTV-EPGFGGQKFMQDMMPKVKWLRENYPTLNIE-VDGG 220 (277)
Q Consensus 143 ~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav-~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~-vdGg 220 (277)
......+.++ +.++..+..+++++ +|.++. +.++.+.+. ..++. +-++
T Consensus 87 ~~~~~~~~~~--------------------~~~~~~g~~~gv~~~s~~~p~--------~~~~~~~~~--g~d~v~~~~~ 136 (207)
T 3ajx_A 87 ADDSTIAGAV--------------------KAAQAHNKGVVVDLIGIEDKA--------TRAQEVRAL--GAKFVEMHAG 136 (207)
T ss_dssp SCHHHHHHHH--------------------HHHHHHTCEEEEECTTCSSHH--------HHHHHHHHT--TCSEEEEECC
T ss_pred CChHHHHHHH--------------------HHHHHcCCceEEEEecCCChH--------HHHHHHHHh--CCCEEEEEec
Confidence 5533332222 23444455555655 222221 123333332 25655 5333
Q ss_pred CCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 221 VGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 221 V~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
+ .|+++|+.|.+ +++++++.. +..+.++||||++|++++.
T Consensus 137 ~-----------~~~~~g~~~~~---~~i~~~~~~--~~pi~v~GGI~~~~~~~~~ 176 (207)
T 3ajx_A 137 L-----------DEQAKPGFDLN---GLLAAGEKA--RVPFSVAGGVKVATIPAVQ 176 (207)
T ss_dssp H-----------HHHTSTTCCTH---HHHHHHHHH--TSCEEEESSCCGGGHHHHH
T ss_pred c-----------cccccCCCchH---HHHHHhhCC--CCCEEEECCcCHHHHHHHH
Confidence 3 25667777665 888888765 5669999999999988764
No 54
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.94 E-value=4.4e-08 Score=88.11 Aligned_cols=173 Identities=13% Similarity=0.137 Sum_probs=116.8
Q ss_pred HHHHHHhcCCCCeeeeeeeccCc--H---HhHHHHHhcCCCeEEEecc----CCCC-------------C------HHHH
Q psy11600 54 VVKCLRNKIPKAFFETHMMVQNP--Q---QWIEPMADANVDQYTFHVE----PVDN-------------V------PQVI 105 (277)
Q Consensus 54 ~v~~l~~~~~~~~~d~Hlmv~~p--~---~~i~~l~~ag~d~i~~H~e----~~d~-------------g------~~~i 105 (277)
..+++|+. -+..+-.+++..+| + +.++.+.++|+|++++-+- .+|| | .+++
T Consensus 8 ~f~~~~~~-~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v 86 (267)
T 3vnd_A 8 KFAALKAQ-DKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDII 86 (267)
T ss_dssp HHHHHHHH-TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHhc-CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 34455554 45678999999999 3 3588888999999943321 3566 3 7889
Q ss_pred HHHHhh-CCCcc-cc----h------hhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHH
Q psy11600 106 RQIKEA-GMKVG-QV----L------QDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAE 173 (277)
Q Consensus 106 ~~i~~~-~~~~~-d~----p------~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~ 173 (277)
+++|+. +..|+ .+ | ++|++.++++|+|.+.+|-. .+++..+ +.+
T Consensus 87 ~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dl---p~ee~~~---------------------~~~ 142 (267)
T 3vnd_A 87 TKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADV---PVEESAP---------------------FSK 142 (267)
T ss_dssp HHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTS---CGGGCHH---------------------HHH
T ss_pred HHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCC---CHhhHHH---------------------HHH
Confidence 999987 55543 32 3 88999999999999999866 5544333 344
Q ss_pred HHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcc-cccCHHHHHHHH
Q psy11600 174 YIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQK-FMQDMMPKVKWL 252 (277)
Q Consensus 174 ~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~-F~~~~~~kI~~l 252 (277)
.++..++.++..+.|.|+ .++++.+.+....+-.. .++ -+..|++. +.++..+.++++
T Consensus 143 ~~~~~gl~~i~liaP~t~--------~eri~~i~~~~~gfvY~-------vS~------~GvTG~~~~~~~~~~~~v~~v 201 (267)
T 3vnd_A 143 AAKAHGIAPIFIAPPNAD--------ADTLKMVSEQGEGYTYL-------LSR------AGVTGTESKAGEPIENILTQL 201 (267)
T ss_dssp HHHHTTCEEECEECTTCC--------HHHHHHHHHHCCSCEEE-------SCC------CCCC--------CHHHHHHHH
T ss_pred HHHHcCCeEEEEECCCCC--------HHHHHHHHHhCCCcEEE-------Eec------CCCCCCccCCcHHHHHHHHHH
Confidence 667778777778899886 34666666665555332 122 12235543 667888999999
Q ss_pred HhhCCCCeEEEeCCCC-ccCHH
Q psy11600 253 RENYPTLNIEVDGGVG-PNTID 273 (277)
Q Consensus 253 ~~~~~~~~I~VDGGI~-~~~~~ 273 (277)
|+.. +.-+.|+|||+ +++++
T Consensus 202 r~~~-~~pv~vGfGI~~~e~~~ 222 (267)
T 3vnd_A 202 AEFN-APPPLLGFGIAEPEQVR 222 (267)
T ss_dssp HTTT-CCCEEECSSCCSHHHHH
T ss_pred HHhc-CCCEEEECCcCCHHHHH
Confidence 9874 56799999996 78887
No 55
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.89 E-value=5e-08 Score=86.86 Aligned_cols=175 Identities=13% Similarity=0.153 Sum_probs=113.5
Q ss_pred HHHHHHhcCCCCeeeeeeeccCc--HH---hHHHHHhcCCCeEEEec---c-CCCC-------------------CHHHH
Q psy11600 54 VVKCLRNKIPKAFFETHMMVQNP--QQ---WIEPMADANVDQYTFHV---E-PVDN-------------------VPQVI 105 (277)
Q Consensus 54 ~v~~l~~~~~~~~~d~Hlmv~~p--~~---~i~~l~~ag~d~i~~H~---e-~~d~-------------------g~~~i 105 (277)
..+.+|+. -+..+-..++..+| ++ .++.+.++|+|++++-. | .+|| +...+
T Consensus 8 ~~~~~~~~-~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i 86 (262)
T 1rd5_A 8 TMAALMAK-GKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEML 86 (262)
T ss_dssp HHHHHHHT-TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHhc-CCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 34455543 35567888999988 33 47778889999994432 1 1332 35678
Q ss_pred HHHHhhCCCcccc-----hh--hhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhc
Q psy11600 106 RQIKEAGMKVGQV-----LQ--DWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESA 178 (277)
Q Consensus 106 ~~i~~~~~~~~d~-----p~--~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~ 178 (277)
+++|+.+..|+-+ |. .+++.+.++|+|.+++|-+ ...+..+++ ..++..
T Consensus 87 ~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~---~~~~~~~~~---------------------~~~~~~ 142 (262)
T 1rd5_A 87 REVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDL---PYVAAHSLW---------------------SEAKNN 142 (262)
T ss_dssp HHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTC---BTTTHHHHH---------------------HHHHHT
T ss_pred HHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCC---ChhhHHHHH---------------------HHHHHc
Confidence 8888886555421 32 2456699999999999866 554443333 345556
Q ss_pred CceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCc--ccccCHHHHHHHHHhhC
Q psy11600 179 DLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQ--KFMQDMMPKVKWLRENY 256 (277)
Q Consensus 179 d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq--~F~~~~~~kI~~l~~~~ 256 (277)
++..+..+.|.++ .+.++.+......+... +++ +|+.|+ .|.+...++++++++..
T Consensus 143 g~~~i~~~a~~t~--------~e~~~~~~~~~~g~v~~-------~s~-------~G~tG~~~~~~~~~~~~i~~v~~~~ 200 (262)
T 1rd5_A 143 NLELVLLTTPAIP--------EDRMKEITKASEGFVYL-------VSV-------NGVTGPRANVNPRVESLIQEVKKVT 200 (262)
T ss_dssp TCEECEEECTTSC--------HHHHHHHHHHCCSCEEE-------ECS-------SCCBCTTSCBCTHHHHHHHHHHHHC
T ss_pred CCceEEEECCCCC--------HHHHHHHHhcCCCeEEE-------ecC-------CCCCCCCcCCCchHHHHHHHHHhhc
Confidence 6656666788775 23444444444333222 222 676665 66677888999999864
Q ss_pred CCCeEEEeCCCC-ccCHHHhh
Q psy11600 257 PTLNIEVDGGVG-PNTIDECA 276 (277)
Q Consensus 257 ~~~~I~VDGGI~-~~~~~~~~ 276 (277)
++.|.++|||+ +++++++.
T Consensus 201 -~~pI~vgGGI~~~e~~~~~~ 220 (262)
T 1rd5_A 201 -NKPVAVGFGISKPEHVKQIA 220 (262)
T ss_dssp -SSCEEEESCCCSHHHHHHHH
T ss_pred -CCeEEEECCcCCHHHHHHHH
Confidence 57799999999 89988764
No 56
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=98.72 E-value=5.2e-07 Score=81.52 Aligned_cols=167 Identities=18% Similarity=0.190 Sum_probs=101.1
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcH--------------HhHHHHH
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQ--------------QWIEPMA 84 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~--------------~~i~~l~ 84 (277)
+++. +...++.|+|++|++ |+.+++++|.++.+++.+|+. .+ +.+|.|+.--. +.++.+.
T Consensus 48 s~~~-a~~A~~gGAdRIELc--~~l~~GGlTPS~g~i~~a~~~-~~--ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~ 121 (287)
T 3iwp_A 48 SVES-AVNAERGGADRIELC--SGLSEGGTTPSMGVLQVVKQS-VQ--IPVFVMIRPRGGDFLYSDREIEVMKADIRLAK 121 (287)
T ss_dssp SHHH-HHHHHHHTCSEEEEC--BCGGGTCBCCCHHHHHHHHTT-CC--SCEEEECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred CHHH-HHHHHHhCCCEEEEC--CCCCCCCCCCCHHHHHHHHHh-cC--CCeEEEEecCCCCcccCHHHHHHHHHHHHHHH
Confidence 4444 445566799999999 999999999999999999974 44 78999997533 3688888
Q ss_pred hcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhh-HHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeC
Q psy11600 85 DANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWI-EPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIK 163 (277)
Q Consensus 85 ~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i-~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~ 163 (277)
++|+|.|.|++=..|+. +..... +.+..++.=-+|||-- ...+
T Consensus 122 ~~GAdGvVfG~L~~dg~----------------iD~~~~~~Li~~a~~l~vTFHRA----FD~~---------------- 165 (287)
T 3iwp_A 122 LYGADGLVFGALTEDGH----------------IDKELCMSLMAICRPLPVTFHRA----FDMV---------------- 165 (287)
T ss_dssp HTTCSEEEECCBCTTSC----------------BCHHHHHHHHHHHTTSCEEECGG----GGGC----------------
T ss_pred HcCCCEEEEeeeCCCCC----------------cCHHHHHHHHHHcCCCcEEEECc----hhcc----------------
Confidence 88999887774112210 001111 1222334445677742 1110
Q ss_pred CCCCHHhHHHHHh-hcCceEEEEecCCCCCc-hhhhhhhhhHHHHHhh-CCCccEEEeCCCCcCcHHHHHH-ccCC
Q psy11600 164 PKTPVDVIAEYIE-SADLVLIMTVEPGFGGQ-KFMQDMMPKVKWLREN-YPTLNIEVDGGVGPNTIDECAK-CLTG 235 (277)
Q Consensus 164 p~t~~~~i~~~i~-~~d~vl~mav~Pgt~gq-~~~~~~l~kI~~l~~~-~~~~~i~vdGgV~~~tv~~~~~-~gpg 235 (277)
.+|.+.++.+++ .+|.+ ++ +|| .-..+-++.++++.+. ...+.|.+.|||+..|+.++.+ +|..
T Consensus 166 -~d~~~Ale~Li~lGvdrI--LT-----SG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~~~tG~~ 233 (287)
T 3iwp_A 166 -HDPMAALETLLTLGFERV--LT-----SGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRILEGSGAT 233 (287)
T ss_dssp -SCHHHHHHHHHHHTCSEE--EE-----CTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTCCTTTHHHHHHHHCCS
T ss_pred -CCHHHHHHHHHHcCCCEE--EC-----CCCCCChHHhHHHHHHHHHHhCCCCEEEECCCcCHHHHHHHHHhhCCC
Confidence 012223333333 33333 33 222 1123334444444433 3568999999999999999877 6665
No 57
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.71 E-value=3.4e-07 Score=78.15 Aligned_cols=179 Identities=15% Similarity=0.120 Sum_probs=118.9
Q ss_pred ceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCC-CCeeeeeeeccCcHHhHHHHH
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIP-KAFFETHMMVQNPQQWIEPMA 84 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~-~~~~d~Hlmv~~p~~~i~~l~ 84 (277)
..+.|++-..|..+..+..+.+.+.|++.+++...- | .+.+.++.+|+.+| ++++-++ .+.++++ ++...
T Consensus 10 ~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~----~---~~~~~i~~ir~~~~~~~~ig~~-~v~~~~~-~~~a~ 80 (205)
T 1wa3_A 10 HKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTV----P---DADTVIKELSFLKEKGAIIGAG-TVTSVEQ-CRKAV 80 (205)
T ss_dssp HCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTS----T---THHHHHHHTHHHHHTTCEEEEE-SCCSHHH-HHHHH
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC----h---hHHHHHHHHHHHCCCCcEEEec-ccCCHHH-HHHHH
Confidence 458899999999999999999999999998776541 2 34677999998755 4554443 3557764 67778
Q ss_pred hcCCCeEEEeccCCCCCHHHHHHHHhhCCCcc-cc--hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCcccee
Q psy11600 85 DANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG-QV--LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLA 161 (277)
Q Consensus 85 ~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~-d~--p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~ 161 (277)
++|+|++ ++.. ..+.+++..++.....+ .+ |.+ +....++|+|.+.+|.. ...
T Consensus 81 ~~Gad~i-v~~~---~~~~~~~~~~~~g~~vi~g~~t~~e-~~~a~~~Gad~vk~~~~---~~~---------------- 136 (205)
T 1wa3_A 81 ESGAEFI-VSPH---LDEEISQFCKEKGVFYMPGVMTPTE-LVKAMKLGHTILKLFPG---EVV---------------- 136 (205)
T ss_dssp HHTCSEE-ECSS---CCHHHHHHHHHHTCEEECEECSHHH-HHHHHHTTCCEEEETTH---HHH----------------
T ss_pred HcCCCEE-EcCC---CCHHHHHHHHHcCCcEECCcCCHHH-HHHHHHcCCCEEEEcCc---ccc----------------
Confidence 8999999 6643 23566766666543321 11 222 33345555555555421 000
Q ss_pred eCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---CC
Q psy11600 162 IKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF---GG 238 (277)
Q Consensus 162 i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~---gg 238 (277)
-++.++++++..+++.+..+|||+.+++.++.++|++. |+
T Consensus 137 -------------------------------------g~~~~~~l~~~~~~~pvia~GGI~~~~~~~~~~~Ga~~v~vGs 179 (205)
T 1wa3_A 137 -------------------------------------GPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGS 179 (205)
T ss_dssp -------------------------------------HHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHHTCSCEEECH
T ss_pred -------------------------------------CHHHHHHHHHhCCCCcEEEcCCCCHHHHHHHHHCCCCEEEECc
Confidence 02235555555567889999999999999999999996 55
Q ss_pred cccccC---HHHHHHHHHh
Q psy11600 239 QKFMQD---MMPKVKWLRE 254 (277)
Q Consensus 239 q~F~~~---~~~kI~~l~~ 254 (277)
..|.++ ..+.++++++
T Consensus 180 ~i~~~d~~~~~~~~~~~~~ 198 (205)
T 1wa3_A 180 ALVKGTPDEVREKAKAFVE 198 (205)
T ss_dssp HHHCSCHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHH
Confidence 555555 5666666654
No 58
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.65 E-value=2.4e-08 Score=87.59 Aligned_cols=182 Identities=12% Similarity=0.045 Sum_probs=100.8
Q ss_pred EeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC----CH--HHHHHHHh
Q psy11600 37 LDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN----VP--QVIRQIKE 110 (277)
Q Consensus 37 ~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~----g~--~~i~~i~~ 110 (277)
+|++||..|.-.. |. ++.++ ...+|.+.++.+.++|++++|++ .+++ .. ..++++++
T Consensus 10 idl~~g~~V~~~~-g~------~~~~~--------~~~d~~~~a~~~~~~Gad~i~v~--~~d~~~~~~~~~~~i~~i~~ 72 (244)
T 1vzw_A 10 VDVRDGQAVRLVH-GE------SGTET--------SYGSPLEAALAWQRSGAEWLHLV--DLDAAFGTGDNRALIAEVAQ 72 (244)
T ss_dssp EEEETTEEBC---------------CC--------BCCCHHHHHHHHHHTTCSEEEEE--EHHHHHTSCCCHHHHHHHHH
T ss_pred EEEECCEEEEeec-cc------cccce--------ecCCHHHHHHHHHHcCCCEEEEe--cCchhhcCCChHHHHHHHHH
Confidence 7999999883211 11 11222 13489999999999999999554 3221 11 78999999
Q ss_pred hCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEE
Q psy11600 111 AGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIM 184 (277)
Q Consensus 111 ~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~m 184 (277)
.+..|+.+ |+ .++.+.++|||.|++|.| ...++.... +.++..+...++
T Consensus 73 ~~~ipv~v~ggI~~~~-~~~~~l~~Gad~V~lg~~---~l~~p~~~~---------------------~~~~~~g~~~~~ 127 (244)
T 1vzw_A 73 AMDIKVELSGGIRDDD-TLAAALATGCTRVNLGTA---ALETPEWVA---------------------KVIAEHGDKIAV 127 (244)
T ss_dssp HCSSEEEEESSCCSHH-HHHHHHHTTCSEEEECHH---HHHCHHHHH---------------------HHHHHHGGGEEE
T ss_pred hcCCcEEEECCcCCHH-HHHHHHHcCCCEEEECch---HhhCHHHHH---------------------HHHHHcCCcEEE
Confidence 88777765 55 499999999999999988 555543222 233333323344
Q ss_pred EecCC-----CCC-chhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCC
Q psy11600 185 TVEPG-----FGG-QKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPT 258 (277)
Q Consensus 185 av~Pg-----t~g-q~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~ 258 (277)
+++|. +.| ++......+.++.+.+. .++..+ .+++ .+++.++.+.. +.++++++.. +
T Consensus 128 ~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~--G~~~i~-----~~~~------~~~~~~~g~~~---~~~~~i~~~~-~ 190 (244)
T 1vzw_A 128 GLDVRGTTLRGRGWTRDGGDLYETLDRLNKE--GCARYV-----VTDI------AKDGTLQGPNL---ELLKNVCAAT-D 190 (244)
T ss_dssp EEEEETTEECCSSSCCCCCBHHHHHHHHHHT--TCCCEE-----EEEC-------------CCCH---HHHHHHHHTC-S
T ss_pred EEEccCCEEEEcCcccCCCCHHHHHHHHHhC--CCCEEE-----Eecc------CcccccCCCCH---HHHHHHHHhc-C
Confidence 55543 110 00000223333444332 233222 1222 25555565644 4445555443 5
Q ss_pred CeEEEeCCCCc-cCHHHhhC
Q psy11600 259 LNIEVDGGVGP-NTIDECAK 277 (277)
Q Consensus 259 ~~I~VDGGI~~-~~~~~~~~ 277 (277)
+.+.++|||+. +++.++.+
T Consensus 191 ipvia~GGI~~~~d~~~~~~ 210 (244)
T 1vzw_A 191 RPVVASGGVSSLDDLRAIAG 210 (244)
T ss_dssp SCEEEESCCCSHHHHHHHHT
T ss_pred CCEEEECCCCCHHHHHHHHh
Confidence 77999999996 99888753
No 59
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.58 E-value=2.4e-07 Score=83.87 Aligned_cols=205 Identities=11% Similarity=-0.019 Sum_probs=119.0
Q ss_pred HHHHHHHHHcCCCEEEEe---ccc-ccccc-CCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEec
Q psy11600 21 HSESQNLLDSGADYLHLD---VMD-GTFVP-NLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHV 95 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~D---imD-g~fvp-~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~ 95 (277)
.+..+.+.+.|++++|+= -.| ..|-- ...-.++.++++++. +++|+.+-....+ .++++.+.++|+|+++.+.
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~-~~~Pvi~~~~~~~-~~~~~~~~~aGad~v~~~~ 108 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAA-VSIPVMAKVRIGH-FVEAMILEAIGVDFIDESE 108 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTT-CSSCEEEEEETTC-HHHHHHHHHTTCSEEEEET
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHh-cCCCeEEEeccCC-HHHHHHHHHCCCCEEeeeC
Confidence 466777888999998861 011 00100 011256889999986 7888877665555 6789999999999996665
Q ss_pred cCCCCCHHHHHHHHhhCC-Ccc--cc--hhhhhHHHHhcCCCeEEeecCCCC-----ChHHHHHHHHHhCCccceeeCCC
Q psy11600 96 EPVDNVPQVIRQIKEAGM-KVG--QV--LQDWIEPMADANVDQYTFHVEPVD-----NVPQVIRQIKEAGMKVGLAIKPK 165 (277)
Q Consensus 96 e~~d~g~~~i~~i~~~~~-~~~--d~--p~~~i~~~~~~g~d~it~H~E~~~-----~~~~~~~~I~~~g~~~g~~i~p~ 165 (277)
+... +.+++++++... .++ ++ |+++.. ..++|+|+|++|-|... +..+..+.++.+. .-.++++.
T Consensus 109 ~~~~--~~~~~~~~~~~~~i~l~~~v~~~~~~~~-a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~--~~~g~t~~ 183 (297)
T 2zbt_A 109 VLTP--ADEEHHIDKWKFKVPFVCGARNLGEALR-RIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIR--YVQSLRED 183 (297)
T ss_dssp TSCC--SCSSCCCCGGGCSSCEEEEESSHHHHHH-HHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHH--HHHHSCGG
T ss_pred CCCh--HHHHHHHHHhCCCceEEeecCCHHHHHH-HHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHH--HcCCcCCC
Confidence 4321 234445554321 222 12 677665 58999999999943100 2333333332210 00012222
Q ss_pred CCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC-CccEEEeCCC-CcCcHHHHHHccCCC---CCcc
Q psy11600 166 TPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGV-GPNTIDECAKCLTGF---GGQK 240 (277)
Q Consensus 166 t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV-~~~tv~~~~~~gpg~---ggq~ 240 (277)
++.+.. ...+..+++++++++..+ .+-++++||| +.+++..+.++|++. |+..
T Consensus 184 ~~~~~~----------------------~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai 241 (297)
T 2zbt_A 184 ELMAYA----------------------KEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGI 241 (297)
T ss_dssp GHHHHH----------------------HHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGG
T ss_pred Cchhhh----------------------hcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHH
Confidence 211000 011223566777776531 2334499999 999999999999985 7777
Q ss_pred cc-cCHHHHHHHHHh
Q psy11600 241 FM-QDMMPKVKWLRE 254 (277)
Q Consensus 241 F~-~~~~~kI~~l~~ 254 (277)
|. ++..+.++++++
T Consensus 242 ~~~~dp~~~~~~l~~ 256 (297)
T 2zbt_A 242 FKSGDPRKRARAIVR 256 (297)
T ss_dssp GGSSCHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHH
Confidence 75 356566666654
No 60
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.56 E-value=9e-07 Score=79.10 Aligned_cols=200 Identities=18% Similarity=0.201 Sum_probs=120.5
Q ss_pred ceEeeeccccCcc--cHHHHHHHHHHcCCCEEEEec------cccccccCC-----C------CCHHHHHHHHhcCCCCe
Q psy11600 6 CMIGPSILNSDLS--NLHSESQNLLDSGADYLHLDV------MDGTFVPNL-----T------FGHPVVKCLRNKIPKAF 66 (277)
Q Consensus 6 ~~~~~s~~~~d~~--~l~~~~~~l~~~~~~~~h~Di------mDg~fvp~~-----~------~g~~~v~~l~~~~~~~~ 66 (277)
..+.|-+.+.|+. ...+.++.|.+.|+|.+-+++ +||+++.+. . -..+.++++|+..|++|
T Consensus 17 ~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~P 96 (262)
T 2ekc_A 17 KALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIP 96 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCC
Confidence 3467778888876 455667888999999999987 667666431 1 12367999998755888
Q ss_pred eeeeee-ccCc------HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecC
Q psy11600 67 FETHMM-VQNP------QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 67 ~d~Hlm-v~~p------~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E 139 (277)
+-+ | ..|| +++++.+.++|+|.++++ |..+ |
T Consensus 97 i~~--m~y~n~v~~~g~~~f~~~~~~aG~dgvii~----dl~~------------------------------------e 134 (262)
T 2ekc_A 97 FLL--MTYYNPIFRIGLEKFCRLSREKGIDGFIVP----DLPP------------------------------------E 134 (262)
T ss_dssp EEE--ECCHHHHHHHCHHHHHHHHHHTTCCEEECT----TCCH------------------------------------H
T ss_pred EEE--EecCcHHHHhhHHHHHHHHHHcCCCEEEEC----CCCH------------------------------------H
Confidence 644 5 4455 567888999999988654 3111 1
Q ss_pred CCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhc-CceEEEEecCCCCCch--hh-hhhhhhHHHHHhhCCCccE
Q psy11600 140 PVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESA-DLVLIMTVEPGFGGQK--FM-QDMMPKVKWLRENYPTLNI 215 (277)
Q Consensus 140 ~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~-d~vl~mav~Pgt~gq~--~~-~~~l~kI~~l~~~~~~~~i 215 (277)
......+.+++.|+..-.-+.|.++.+.+..+.... +++..+++ +|+.|.. +- ++..+.++.+++.. ++.+
T Consensus 135 ---e~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~-~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv 209 (262)
T 2ekc_A 135 ---EAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSV-TGTTGAREKLPYERIKKKVEEYRELC-DKPV 209 (262)
T ss_dssp ---HHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESS-CC---------CHHHHHHHHHHHHHC-CSCE
T ss_pred ---HHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEec-CCccCCCCCcCcccHHHHHHHHHhhc-CCCE
Confidence 223344445555443333345556665555555443 34444443 3433333 22 44557788888765 6789
Q ss_pred EEeCCCC-cCcHHHHHHccCCC---CCccccc---CHHHHHHHHH
Q psy11600 216 EVDGGVG-PNTIDECAKCLTGF---GGQKFMQ---DMMPKVKWLR 253 (277)
Q Consensus 216 ~vdGgV~-~~tv~~~~~~gpg~---ggq~F~~---~~~~kI~~l~ 253 (277)
.+.+||+ .+++.. +..|++. |+..... +..++++++.
T Consensus 210 ~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~~~~~~~~~~~~~~ 253 (262)
T 2ekc_A 210 VVGFGVSKKEHARE-IGSFADGVVVGSALVKLAGQKKIEDLGNLV 253 (262)
T ss_dssp EEESSCCSHHHHHH-HHTTSSEEEECHHHHHHHHTTCHHHHHHHH
T ss_pred EEeCCCCCHHHHHH-HHcCCCEEEECHHHHhhhhhhhHHHHHHHH
Confidence 9999998 888887 5667875 5433322 2345555543
No 61
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.46 E-value=2.9e-06 Score=76.42 Aligned_cols=185 Identities=15% Similarity=0.209 Sum_probs=120.1
Q ss_pred ceEeeeccccCcc--cHHHHHHHHHHcCCCEEEEe------ccccccccC---------CC--CCHHHHHHHHhcCCCCe
Q psy11600 6 CMIGPSILNSDLS--NLHSESQNLLDSGADYLHLD------VMDGTFVPN---------LT--FGHPVVKCLRNKIPKAF 66 (277)
Q Consensus 6 ~~~~~s~~~~d~~--~l~~~~~~l~~~~~~~~h~D------imDg~fvp~---------~~--~g~~~v~~l~~~~~~~~ 66 (277)
.-+.|-+.+.|+. ...+.++.|.+.|+|.+.+. ++||+.+.+ ++ -..+.++++|+.++++|
T Consensus 20 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~P 99 (271)
T 3nav_A 20 GAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETP 99 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 3488999999964 67788888999999999999 789988764 11 12478999998767888
Q ss_pred eeeeeeccCc------HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCC
Q psy11600 67 FETHMMVQNP------QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 67 ~d~Hlmv~~p------~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~ 140 (277)
+.+ |-..|| +++++.+.++|+|.+.+. |.. +|
T Consensus 100 ivl-m~Y~n~v~~~g~~~f~~~~~~aGvdGvIip-Dlp---------------------------------------~e- 137 (271)
T 3nav_A 100 IGL-LMYANLVYARGIDDFYQRCQKAGVDSVLIA-DVP---------------------------------------TN- 137 (271)
T ss_dssp EEE-EECHHHHHHTCHHHHHHHHHHHTCCEEEET-TSC---------------------------------------GG-
T ss_pred EEE-EecCcHHHHHhHHHHHHHHHHCCCCEEEEC-CCC---------------------------------------HH-
Confidence 875 223343 567888899999987553 211 11
Q ss_pred CCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhc-CceEEEEecCCCCCch--hhhhhhhhHHHHHhhCCCccEEE
Q psy11600 141 VDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESA-DLVLIMTVEPGFGGQK--FMQDMMPKVKWLRENYPTLNIEV 217 (277)
Q Consensus 141 ~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~-d~vl~mav~Pgt~gq~--~~~~~l~kI~~l~~~~~~~~i~v 217 (277)
......+..++.|...-.-+.|.++.+.+....+.. +++-.++ ..|+.|.. +-+++.+.++++++.. ++-+.+
T Consensus 138 --e~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs-~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~v 213 (271)
T 3nav_A 138 --ESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLS-RAGVTGAETKANMPVHALLERLQQFD-APPALL 213 (271)
T ss_dssp --GCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECC-CC--------CCHHHHHHHHHHHHTT-CCCEEE
T ss_pred --HHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEe-ccCCCCcccCCchhHHHHHHHHHHhc-CCCEEE
Confidence 233444555555554444455666666666665554 4544334 44544433 3344556677777765 577889
Q ss_pred eCCC-CcCcHHHHHHccCCC
Q psy11600 218 DGGV-GPNTIDECAKCLTGF 236 (277)
Q Consensus 218 dGgV-~~~tv~~~~~~gpg~ 236 (277)
.+|| +.+++.+..+.|++.
T Consensus 214 GfGIst~e~~~~~~~~gADg 233 (271)
T 3nav_A 214 GFGISEPAQVKQAIEAGAAG 233 (271)
T ss_dssp CSSCCSHHHHHHHHHTTCSE
T ss_pred ECCCCCHHHHHHHHHcCCCE
Confidence 9999 478887677888885
No 62
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=98.46 E-value=1e-06 Score=80.48 Aligned_cols=94 Identities=16% Similarity=0.085 Sum_probs=66.3
Q ss_pred eeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccC-CCCCHHHHHHHHhcCCCCeeeeeeeccCc----HHhHHHH
Q psy11600 9 GPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPN-LTFGHPVVKCLRNKIPKAFFETHMMVQNP----QQWIEPM 83 (277)
Q Consensus 9 ~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~-~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p----~~~i~~l 83 (277)
++=++++|+.++++.++.+++.+-...++.+ | +|. .++|+..+++||+.+ +.++-.+++..|. ..+++.+
T Consensus 25 ~~LiVALD~~~~~eal~l~~~l~~~v~~vKV--G--~~lf~~~G~~~V~~Lk~~~-g~~IflDlKl~DIpnTv~~av~~~ 99 (303)
T 3ru6_A 25 MKLCVALDLSTKEECLQLAKELKNLDIWLKV--G--LRAYLRDGFKFIEELKKVD-DFKIFLDLKFHDIPNTMADACEEV 99 (303)
T ss_dssp CEEEEECCCSSHHHHHHHHHHTTTSSCEEEE--C--HHHHHHHTHHHHHHHHHHC-CCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHhCCCccEEEe--C--HHHHHHhCHHHHHHHHHhh-CCCEEEEeeeccCchhHHHHHHHH
Confidence 4557899999999999999987644344444 2 354 468999999999863 4444444444553 3456777
Q ss_pred HhcCCCeEEEeccCCCCCHHHHHHHHh
Q psy11600 84 ADANVDQYTFHVEPVDNVPQVIRQIKE 110 (277)
Q Consensus 84 ~~ag~d~i~~H~e~~d~g~~~i~~i~~ 110 (277)
.++|+|++|+|.. +|+..+++..+
T Consensus 100 a~lGaD~vTVHa~---~G~~~m~aa~e 123 (303)
T 3ru6_A 100 SKLGVDMINIHAS---AGKIAIQEVMT 123 (303)
T ss_dssp HTTTCSEEEEEGG---GCHHHHHHHHH
T ss_pred HhcCCCEEEEecc---CCHHHHHHHHH
Confidence 8899999999975 35666766544
No 63
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.42 E-value=2.3e-06 Score=83.96 Aligned_cols=192 Identities=13% Similarity=0.071 Sum_probs=120.0
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a 86 (277)
.|+||.++.+..++.+.++++.+.|++++|+...|..+... .+..+++++. ++ ...++|++.+ .++...+.
T Consensus 14 lITd~~~~~~~~~l~~~ve~al~~Gv~~vQlR~K~~~~~~~----~~~a~~l~~l-~~-~~~v~liIND---~~dlA~~~ 84 (540)
T 3nl6_A 14 LVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFF----IEEALQIKEL-CH-AHNVPLIIND---RIDVAMAI 84 (540)
T ss_dssp EEC-CTTCCTTCCHHHHHHHHHHTTCSEEEECCSSSCTTHH----HHHHHHHHHH-HH-HTTCCEEECS---CSHHHHHT
T ss_pred EEECchhccCcchHHHHHHHHHHCCCCEEEEecCCCCHHHH----HHHHHHHHHH-HH-hcCCEEEEeC---cHHHHHHc
Confidence 47888888888899999999999999999999999765432 3445555543 22 3467788876 45566778
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCC
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKT 166 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t 166 (277)
|+|-+ |+...|. .....+.+. |...-+|+...+
T Consensus 85 gAdGV--HLgq~dl-------------------------------------------~~~~ar~~l--g~~~iiG~S~ht 117 (540)
T 3nl6_A 85 GADGI--HVGQDDM-------------------------------------------PIPMIRKLV--GPDMVIGWSVGF 117 (540)
T ss_dssp TCSEE--EECTTSS-------------------------------------------CHHHHHHHH--CTTSEEEEEECS
T ss_pred CCCEE--EEChhhc-------------------------------------------CHHHHHHHh--CCCCEEEEECCC
Confidence 99988 7665552 111122121 211223333333
Q ss_pred CHHhHHHHHh-h---cCceEEEEecCCCCCchhh--hhhhhhHHHHHhhC-----CCccEEEeCCCCcCcHHHHHH----
Q psy11600 167 PVDVIAEYIE-S---ADLVLIMTVEPGFGGQKFM--QDMMPKVKWLRENY-----PTLNIEVDGGVGPNTIDECAK---- 231 (277)
Q Consensus 167 ~~~~i~~~i~-~---~d~vl~mav~Pgt~gq~~~--~~~l~kI~~l~~~~-----~~~~i~vdGgV~~~tv~~~~~---- 231 (277)
+++...... . +|++.+..+.|..+-+..- +--++.++++++.. .++.+...|||+.+++.++.+
T Consensus 118 -~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~~~~~~ 196 (540)
T 3nl6_A 118 -PEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVS 196 (540)
T ss_dssp -HHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHHHHCBC
T ss_pred -HHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHHHhhcc
Confidence 344444333 3 7888887777754433321 11134444444432 468899999999999999997
Q ss_pred ----ccCCC---CCcccc-cCHHHHHHHHHhh
Q psy11600 232 ----CLTGF---GGQKFM-QDMMPKVKWLREN 255 (277)
Q Consensus 232 ----~gpg~---ggq~F~-~~~~~kI~~l~~~ 255 (277)
+|++. ++..|. ++..+.++++++.
T Consensus 197 ~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~~ 228 (540)
T 3nl6_A 197 SNGKRSLDGICVVSDIIASLDAAKSTKILRGL 228 (540)
T ss_dssp TTSSCBCSCEEESHHHHTCTTHHHHHHHHHHH
T ss_pred cccccCceEEEEeHHHhcCCCHHHHHHHHHHH
Confidence 55654 566665 4677777777753
No 64
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.35 E-value=6e-07 Score=78.46 Aligned_cols=160 Identities=8% Similarity=-0.023 Sum_probs=94.5
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCC----CCH--HHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCC
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVD----NVP--QVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d----~g~--~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~ 140 (277)
..+|.+.++.+.++|++++|++ .++ +.+ ..++++++.+..|+.+ |+ .++.+.++|||.|++|.+
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~--~~d~~~~~~~~~~~i~~i~~~~~ipv~v~ggi~~~~-~~~~~l~~Gad~V~lg~~- 105 (244)
T 2y88_A 30 YGSAVDAALGWQRDGAEWIHLV--DLDAAFGRGSNHELLAEVVGKLDVQVELSGGIRDDE-SLAAALATGCARVNVGTA- 105 (244)
T ss_dssp EEEHHHHHHHHHHTTCSEEEEE--EHHHHTTSCCCHHHHHHHHHHCSSEEEEESSCCSHH-HHHHHHHTTCSEEEECHH-
T ss_pred cCCHHHHHHHHHHcCCCEEEEE--cCcccccCCChHHHHHHHHHhcCCcEEEECCCCCHH-HHHHHHHcCCCEEEECch-
Confidence 3489999999999999999655 222 122 8899999988777765 55 499999999999999987
Q ss_pred CCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCC----C-----CC-chhhhhhhhhHHHHHhhC
Q psy11600 141 VDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPG----F-----GG-QKFMQDMMPKVKWLRENY 210 (277)
Q Consensus 141 ~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pg----t-----~g-q~~~~~~l~kI~~l~~~~ 210 (277)
...++.. + .+.++..+...++++++. . .| ++--....+.++.+.+.
T Consensus 106 --~l~~p~~-~--------------------~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~- 161 (244)
T 2y88_A 106 --ALENPQW-C--------------------ARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE- 161 (244)
T ss_dssp --HHHCHHH-H--------------------HHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT-
T ss_pred --HhhChHH-H--------------------HHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC-
Confidence 5544322 2 223333332233444442 0 00 00000223334444433
Q ss_pred CCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCc-cCHHHhh
Q psy11600 211 PTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECA 276 (277)
Q Consensus 211 ~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~-~~~~~~~ 276 (277)
.++..+ .+++ .+++.++.+. ++.++++++. .++.+.++|||+. +++.++.
T Consensus 162 -G~~~i~-----~~~~------~~~~~~~g~~---~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~ 212 (244)
T 2y88_A 162 -GCSRFV-----VTDI------TKDGTLGGPN---LDLLAGVADR-TDAPVIASGGVSSLDDLRAIA 212 (244)
T ss_dssp -TCCCEE-----EEET------TTTTTTSCCC---HHHHHHHHTT-CSSCEEEESCCCSHHHHHHHH
T ss_pred -CCCEEE-----EEec------CCccccCCCC---HHHHHHHHHh-CCCCEEEECCCCCHHHHHHHH
Confidence 233222 1222 2554445553 4455555554 3677999999996 8888775
No 65
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=98.33 E-value=5.5e-07 Score=79.06 Aligned_cols=69 Identities=12% Similarity=0.147 Sum_probs=52.3
Q ss_pred eeccCcHHhHHHHHhcC--CCeEEEeccC-CCCCHHHHHHHHh-hC-CCccc-----ch---hhhhHHHHhcCCCeEEee
Q psy11600 71 MMVQNPQQWIEPMADAN--VDQYTFHVEP-VDNVPQVIRQIKE-AG-MKVGQ-----VL---QDWIEPMADANVDQYTFH 137 (277)
Q Consensus 71 lmv~~p~~~i~~l~~ag--~d~i~~H~e~-~d~g~~~i~~i~~-~~-~~~~d-----~p---~~~i~~~~~~g~d~it~H 137 (277)
+=+.+.++.++.+.+.+ ++|++++.+. ..+|+.+|+++|+ .. ..+.| .| ..|++.+.++|+|++|+|
T Consensus 19 lD~~~~~~a~~~v~~~~~~v~~~Kvg~~lf~~~G~~~v~~l~~~~g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh 98 (228)
T 3m47_A 19 MDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVH 98 (228)
T ss_dssp CCCCSHHHHHHHHHTTTTTCSEEEEEHHHHHHHCTHHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred eCCCCHHHHHHHHHHcCCcccEEEEcHHHHHhcCHHHHHHHHhcCCCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEe
Confidence 33467778888887777 7899766543 2459999999999 43 33444 45 459999999999999999
Q ss_pred cC
Q psy11600 138 VE 139 (277)
Q Consensus 138 ~E 139 (277)
.+
T Consensus 99 ~~ 100 (228)
T 3m47_A 99 GF 100 (228)
T ss_dssp ST
T ss_pred cc
Confidence 98
No 66
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.17 E-value=4.2e-05 Score=66.42 Aligned_cols=169 Identities=7% Similarity=0.035 Sum_probs=100.9
Q ss_pred HHHHHHHhcCCCCeeeeeeec-------c--CcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcc-------
Q psy11600 53 PVVKCLRNKIPKAFFETHMMV-------Q--NPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG------- 116 (277)
Q Consensus 53 ~~v~~l~~~~~~~~~d~Hlmv-------~--~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~------- 116 (277)
+++++|+ ..+...+-.-. . ...+.++.+.++|++++ |++ ++..++++|+.+..|+
T Consensus 9 ~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i--~~~----~~~~i~~i~~~~~~p~i~~~~~~ 79 (234)
T 1yxy_A 9 KLMEQLK---GGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGI--RAN----SVRDIKEIQAITDLPIIGIIKKD 79 (234)
T ss_dssp HHHHHHT---TSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEE--EEE----SHHHHHHHHTTCCSCEEEECBCC
T ss_pred HHHHHHh---CCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEe--ecC----CHHHHHHHHHhCCCCEEeeEcCC
Confidence 5566663 24455554443 2 33467888889999999 543 6889999999876654
Q ss_pred --c------chhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhc--CceEEEEe
Q psy11600 117 --Q------VLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESA--DLVLIMTV 186 (277)
Q Consensus 117 --d------~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~--d~vl~mav 186 (277)
+ .|.++++.+.++|||.|.+|.+ ...+. .+..+..+.+.++.. +..++ +
T Consensus 80 ~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~---~~~~~----------------~~~~~~~~i~~i~~~~~~~~v~--~ 138 (234)
T 1yxy_A 80 YPPQEPFITATMTEVDQLAALNIAVIAMDCT---KRDRH----------------DGLDIASFIRQVKEKYPNQLLM--A 138 (234)
T ss_dssp CTTSCCCBSCSHHHHHHHHTTTCSEEEEECC---SSCCT----------------TCCCHHHHHHHHHHHCTTCEEE--E
T ss_pred CCccccccCChHHHHHHHHHcCCCEEEEccc---ccCCC----------------CCccHHHHHHHHHHhCCCCeEE--E
Confidence 1 1678999999999999999998 42110 011222233333333 44433 3
Q ss_pred cCCCCCchhhhhhhhhHHHHHhhCCCccEE--EeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEe
Q psy11600 187 EPGFGGQKFMQDMMPKVKWLRENYPTLNIE--VDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVD 264 (277)
Q Consensus 187 ~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~--vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VD 264 (277)
++.+. +..... .....++. ..+|++ |+ ++.+....++.++++++. ++.+.++
T Consensus 139 ~~~t~---------~ea~~a--~~~Gad~i~~~v~g~~-----------~~--~~~~~~~~~~~i~~~~~~--~ipvia~ 192 (234)
T 1yxy_A 139 DISTF---------DEGLVA--HQAGIDFVGTTLSGYT-----------PY--SRQEAGPDVALIEALCKA--GIAVIAE 192 (234)
T ss_dssp ECSSH---------HHHHHH--HHTTCSEEECTTTTSS-----------TT--SCCSSSCCHHHHHHHHHT--TCCEEEE
T ss_pred eCCCH---------HHHHHH--HHcCCCEEeeeccccC-----------CC--CcCCCCCCHHHHHHHHhC--CCCEEEE
Confidence 44432 112222 12345554 233432 32 233344446777777765 6789999
Q ss_pred CCCC-ccCHHHhhC
Q psy11600 265 GGVG-PNTIDECAK 277 (277)
Q Consensus 265 GGI~-~~~~~~~~~ 277 (277)
|||+ .+++.++.+
T Consensus 193 GGI~s~~~~~~~~~ 206 (234)
T 1yxy_A 193 GKIHSPEEAKKIND 206 (234)
T ss_dssp SCCCSHHHHHHHHT
T ss_pred CCCCCHHHHHHHHH
Confidence 9999 899887753
No 67
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.13 E-value=6.8e-05 Score=64.57 Aligned_cols=142 Identities=12% Similarity=0.117 Sum_probs=86.2
Q ss_pred HhHHHHHhcCCCeEEEeccCCCC--C--HHHHHHHHhhCCCccc-chhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHH
Q psy11600 78 QWIEPMADANVDQYTFHVEPVDN--V--PQVIRQIKEAGMKVGQ-VLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIK 152 (277)
Q Consensus 78 ~~i~~l~~ag~d~i~~H~e~~d~--g--~~~i~~i~~~~~~~~d-~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~ 152 (277)
+.++...++|++++ |++.++. + ..+++++++.+..... +..++++.+.++|+|.|++|.+ ....+
T Consensus 33 ~~~~~~~~~G~~~v--~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v~~~~~~a~~~gad~v~l~~~-----~~~~~--- 102 (221)
T 1yad_A 33 ARIIITIQNEVDFI--HIRERSKSAADILKLLDLIFEGGIDKRKLVMNGRVDIALFSTIHRVQLPSG-----SFSPK--- 102 (221)
T ss_dssp HHHHHHHGGGCSEE--EECCTTSCHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHTTTCCEEEECTT-----SCCHH---
T ss_pred HHHHHHHHCCCCEE--EEccCCCCHHHHHHHHHHHHHhcCcCCeEEEeChHHHHHHcCCCEEEeCCC-----ccCHH---
Confidence 34777788999998 8877654 3 6678888887643222 2446889999999999999854 22222
Q ss_pred HhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHc
Q psy11600 153 EAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKC 232 (277)
Q Consensus 153 ~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~ 232 (277)
.+..... +++++.++. +. +.+.... ....|..+.|.+
T Consensus 103 -----------------~~~~~~~--~~~ig~sv~--t~---------~~~~~a~--~~gaD~i~~~~~----------- 139 (221)
T 1yad_A 103 -----------------QIRARFP--HLHIGRSVH--SL---------EEAVQAE--KEDADYVLFGHV----------- 139 (221)
T ss_dssp -----------------HHHHHCT--TCEEEEEEC--SH---------HHHHHHH--HTTCSEEEEECC-----------
T ss_pred -----------------HHHHHCC--CCEEEEEcC--CH---------HHHHHHH--hCCCCEEEECCc-----------
Confidence 2222222 566666653 21 1122222 234566654433
Q ss_pred cCCCCCccc---ccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 233 LTGFGGQKF---MQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 233 gpg~ggq~F---~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
|+++.+ .+..++.++++++.. ++.+.++||||++|+.++.
T Consensus 140 ---f~~~~~~g~~~~~~~~l~~~~~~~-~~pvia~GGI~~~nv~~~~ 182 (221)
T 1yad_A 140 ---FETDCKKGLEGRGVSLLSDIKQRI-SIPVIAIGGMTPDRLRDVK 182 (221)
T ss_dssp ---C----------CHHHHHHHHHHHC-CSCEEEESSCCGGGHHHHH
T ss_pred ---cccCCCCCCCCCCHHHHHHHHHhC-CCCEEEECCCCHHHHHHHH
Confidence 333332 244567888887654 5679999999999998874
No 68
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=98.13 E-value=1.6e-05 Score=70.20 Aligned_cols=91 Identities=12% Similarity=0.131 Sum_probs=65.3
Q ss_pred eeccccCcccHHHHHHHHHHcC--CCE--EEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeee--eccCcHHhHHHH
Q psy11600 10 PSILNSDLSNLHSESQNLLDSG--ADY--LHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHM--MVQNPQQWIEPM 83 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~--~~~--~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hl--mv~~p~~~i~~l 83 (277)
+=++++|+.++++.++.+++.+ +++ +|+++. ..+|++.+++||+.-..+++|.++ +-.....+++.+
T Consensus 10 ~LivALD~~~~~~al~l~~~~~~~v~~~Kvg~~lf-------~~~G~~~v~~L~~~g~~iflDlK~~DI~nTv~~~~~~~ 82 (239)
T 3tr2_A 10 KVIVAIDAGTVEQARAQINPLTPELCHLKIGSILF-------TRYGPAFVEELMQKGYRIFLDLKFYDIPQTVAGACRAV 82 (239)
T ss_dssp CEEEECCCSSHHHHHHHHTTCCTTTCEEEEEHHHH-------HHHHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHH
T ss_pred CeEEEeCCCCHHHHHHHHHHhCCcccEEEeCHHHH-------HhhCHHHHHHHHhcCCCEEEEecccccchHHHHHHHHH
Confidence 4478999999999999988764 345 476663 468999999999853345555554 222234467788
Q ss_pred HhcCCCeEEEeccCCCCCHHHHHHHHh
Q psy11600 84 ADANVDQYTFHVEPVDNVPQVIRQIKE 110 (277)
Q Consensus 84 ~~ag~d~i~~H~e~~d~g~~~i~~i~~ 110 (277)
.++|+|++|+|.- +|+..+++.++
T Consensus 83 ~~~gad~vTvh~~---~G~~~~~~a~~ 106 (239)
T 3tr2_A 83 AELGVWMMNIHIS---GGRTMMETVVN 106 (239)
T ss_dssp HHTTCSEEEEEGG---GCHHHHHHHHH
T ss_pred HhCCCCEEEEecc---CCHHHHHHHHH
Confidence 9999999999963 46677777654
No 69
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=98.06 E-value=2.9e-06 Score=73.64 Aligned_cols=76 Identities=9% Similarity=0.195 Sum_probs=52.8
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeee--eccCcHHhHHHHHhcCCCe
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHM--MVQNPQQWIEPMADANVDQ 90 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hl--mv~~p~~~i~~l~~ag~d~ 90 (277)
.|..++++.++.+++. .++ ++.. ..|. . ||++.+++||+.-..+++|+++ +-..+..+++.+.++|+|+
T Consensus 16 ~D~~~~~~a~~i~~~~-~~~---~~~Kvg~~l~--~-~G~~~v~~l~~~~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~ 88 (213)
T 1vqt_A 16 VLSLDMEDPIRFIDEN-GSF---EVVKVGHNLA--I-HGKKIFDELAKRNLKIILDLKFCDIPSTVERSIKSWDHPAIIG 88 (213)
T ss_dssp EEECCSSSHHHHHHHH-CCC---SEEEECHHHH--T-TCTHHHHHHHTTTCEEEEEEEECSCHHHHHHHHHHHCCTTEEE
T ss_pred CCCCCHHHHHHHHHHh-CCC---CEEEECHHHH--h-hCHHHHHHHHHCCCCEEEEeecccCchHHHHHHHHHHHCCCCE
Confidence 5677777777777766 332 4444 2333 4 8999999999853456666655 3455666788888899999
Q ss_pred EEEeccC
Q psy11600 91 YTFHVEP 97 (277)
Q Consensus 91 i~~H~e~ 97 (277)
+|+|...
T Consensus 89 vTvh~~~ 95 (213)
T 1vqt_A 89 FTVHSCA 95 (213)
T ss_dssp EEEEGGG
T ss_pred EEEeccC
Confidence 9999764
No 70
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.05 E-value=0.0004 Score=59.69 Aligned_cols=178 Identities=15% Similarity=0.147 Sum_probs=113.2
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a 86 (277)
.+.|.+-..|..++.+-++.+.+.|++++.+-.-+ ..+.+.++.+++ +++.+-++. +.+. +.++...++
T Consensus 14 ~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~-------~~~~~~i~~~~~--~~~~~gag~-vl~~-d~~~~A~~~ 82 (207)
T 2yw3_A 14 RLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRT-------EKGLEALKALRK--SGLLLGAGT-VRSP-KEAEAALEA 82 (207)
T ss_dssp CEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSS-------THHHHHHHHHTT--SSCEEEEES-CCSH-HHHHHHHHH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCC-------hHHHHHHHHHhC--CCCEEEeCe-EeeH-HHHHHHHHc
Confidence 57788777788888899999999999998776321 124577888887 888888888 4444 778889999
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCC
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKT 166 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t 166 (277)
|+|++ |.-..| +.+++..+ ..|...-.| ..|
T Consensus 83 GAd~v--~~~~~d--~~v~~~~~-------------------------------------------~~g~~~i~G--~~t 113 (207)
T 2yw3_A 83 GAAFL--VSPGLL--EEVAALAQ-------------------------------------------ARGVPYLPG--VLT 113 (207)
T ss_dssp TCSEE--EESSCC--HHHHHHHH-------------------------------------------HHTCCEEEE--ECS
T ss_pred CCCEE--EcCCCC--HHHHHHHH-------------------------------------------HhCCCEEec--CCC
Confidence 99999 644333 23333333 222221111 111
Q ss_pred CHHhHHHHHh-hcCceEEEEecCCCC--CchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---CCcc
Q psy11600 167 PVDVIAEYIE-SADLVLIMTVEPGFG--GQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF---GGQK 240 (277)
Q Consensus 167 ~~~~i~~~i~-~~d~vl~mav~Pgt~--gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~---ggq~ 240 (277)
.+++..... -+|++- +-|... | ++-++.++...+++.+...|||+.+|+.++.++|+.. |+..
T Consensus 114 -~~e~~~A~~~Gad~v~---~fpa~~~gG-------~~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aGa~~vavgSai 182 (207)
T 2yw3_A 114 -PTEVERALALGLSALK---FFPAEPFQG-------VRVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALPNLLAVGGSWL 182 (207)
T ss_dssp -HHHHHHHHHTTCCEEE---ETTTTTTTH-------HHHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCSSBSCEEESGG
T ss_pred -HHHHHHHHHCCCCEEE---EecCccccC-------HHHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCCCcEEEEehhh
Confidence 112211111 234332 233211 1 2346677777788999999999999999999999885 5566
Q ss_pred cccC---HHHHHHHHHhh
Q psy11600 241 FMQD---MMPKVKWLREN 255 (277)
Q Consensus 241 F~~~---~~~kI~~l~~~ 255 (277)
|.++ ..++.+++.+.
T Consensus 183 ~~~d~~~i~~~a~~~~~~ 200 (207)
T 2yw3_A 183 LQGNLEAVRAKVRAAKAL 200 (207)
T ss_dssp GSSCHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHH
Confidence 6544 45566666554
No 71
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.03 E-value=7.6e-05 Score=64.13 Aligned_cols=159 Identities=11% Similarity=0.117 Sum_probs=93.7
Q ss_pred CeeeeeeeccC-------cHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCccc---------------chhhh
Q psy11600 65 AFFETHMMVQN-------PQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQ---------------VLQDW 122 (277)
Q Consensus 65 ~~~d~Hlmv~~-------p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d---------------~p~~~ 122 (277)
+.++|-..... +.+.++.+.++|++++ |.+ +++.++++|+.+..|+. .+.++
T Consensus 7 ~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i--~~~----~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~ 80 (223)
T 1y0e_A 7 LIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGI--RAN----TKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKE 80 (223)
T ss_dssp EEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEE--EEE----SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHH
T ss_pred eEEEecCCCCCCCCCCccHHHHHHHHHHCCCeee--ccC----CHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHH
Confidence 44555555552 2345777888999999 543 68899999999876651 14678
Q ss_pred hHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhc--CceEEEEecCCCCCchhhhhhh
Q psy11600 123 IEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESA--DLVLIMTVEPGFGGQKFMQDMM 200 (277)
Q Consensus 123 i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~--d~vl~mav~Pgt~gq~~~~~~l 200 (277)
++.+.++|+|.+++|.+ ... +|..++..+.+.+++. ++.++ +++.+.
T Consensus 81 i~~~~~~Gad~v~l~~~---~~~-----------------~p~~~~~~~i~~~~~~~~~~~v~--~~~~t~--------- 129 (223)
T 1y0e_A 81 VDELIESQCEVIALDAT---LQQ-----------------RPKETLDELVSYIRTHAPNVEIM--ADIATV--------- 129 (223)
T ss_dssp HHHHHHHTCSEEEEECS---CSC-----------------CSSSCHHHHHHHHHHHCTTSEEE--EECSSH---------
T ss_pred HHHHHhCCCCEEEEeee---ccc-----------------CcccCHHHHHHHHHHhCCCceEE--ecCCCH---------
Confidence 99999999999999998 421 1111222233334443 55443 344431
Q ss_pred hhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCccccc----CHHHHHHHHHhhCCCCeEEEeCCC-CccCHHHh
Q psy11600 201 PKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQ----DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDEC 275 (277)
Q Consensus 201 ~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~----~~~~kI~~l~~~~~~~~I~VDGGI-~~~~~~~~ 275 (277)
+....+.+ ...++.. ++ .+|+.++.+.. ..++.++++++.. ++.+.++||| |.+++.++
T Consensus 130 ~e~~~~~~--~G~d~i~---~~----------~~g~t~~~~~~~~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~ 193 (223)
T 1y0e_A 130 EEAKNAAR--LGFDYIG---TT----------LHGYTSYTQGQLLYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRV 193 (223)
T ss_dssp HHHHHHHH--TTCSEEE---CT----------TTTSSTTSTTCCTTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHH
T ss_pred HHHHHHHH--cCCCEEE---eC----------CCcCcCCCCCCCCCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHH
Confidence 11222222 2234431 11 24454444422 2345666666553 5789999999 89998876
Q ss_pred h
Q psy11600 276 A 276 (277)
Q Consensus 276 ~ 276 (277)
.
T Consensus 194 ~ 194 (223)
T 1y0e_A 194 M 194 (223)
T ss_dssp H
T ss_pred H
Confidence 4
No 72
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.01 E-value=1.9e-05 Score=67.21 Aligned_cols=82 Identities=7% Similarity=0.048 Sum_probs=55.2
Q ss_pred eeeeeeccCc---HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhC--CCcc---cc--hhhhhHHHHhcCCCeEEe
Q psy11600 67 FETHMMVQNP---QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAG--MKVG---QV--LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 67 ~d~Hlmv~~p---~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~--~~~~---d~--p~~~i~~~~~~g~d~it~ 136 (277)
+-+=+...++ .+.++.+.++|++++.+|++. .++...++.+|+.. ...+ .+ |++ ++...++|||++ +
T Consensus 12 ~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~-~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~-~~~a~~~Gad~i-v 88 (205)
T 1wa3_A 12 IVAVLRANSVEEAKEKALAVFEGGVHLIEITFTV-PDADTVIKELSFLKEKGAIIGAGTVTSVEQ-CRKAVESGAEFI-V 88 (205)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTS-TTHHHHHHHTHHHHHTTCEEEEESCCSHHH-HHHHHHHTCSEE-E
T ss_pred EEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC-hhHHHHHHHHHHHCCCCcEEEecccCCHHH-HHHHHHcCCCEE-E
Confidence 4444444444 446888888999999999886 45677899998874 2222 21 544 577788999999 8
Q ss_pred ecCCCCChHHHHHHHHHh
Q psy11600 137 HVEPVDNVPQVIRQIKEA 154 (277)
Q Consensus 137 H~E~~~~~~~~~~~I~~~ 154 (277)
+.. ....+++..++.
T Consensus 89 ~~~---~~~~~~~~~~~~ 103 (205)
T 1wa3_A 89 SPH---LDEEISQFCKEK 103 (205)
T ss_dssp CSS---CCHHHHHHHHHH
T ss_pred cCC---CCHHHHHHHHHc
Confidence 765 445566666554
No 73
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.90 E-value=0.0013 Score=58.38 Aligned_cols=174 Identities=16% Similarity=0.126 Sum_probs=103.3
Q ss_pred HHHHHhcCCCCeeeeeeeccCcHH-----hHHHHHhcCCCeEEEeccCC----CC-------------------CHHHHH
Q psy11600 55 VKCLRNKIPKAFFETHMMVQNPQQ-----WIEPMADANVDQYTFHVEPV----DN-------------------VPQVIR 106 (277)
Q Consensus 55 v~~l~~~~~~~~~d~Hlmv~~p~~-----~i~~l~~ag~d~i~~H~e~~----d~-------------------g~~~i~ 106 (277)
.+.+|+. -+..+-.|++..+|.. .++.+.++|+|.|-+-+-.. || ...+++
T Consensus 8 f~~~~~~-~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~ 86 (262)
T 2ekc_A 8 FTELKEK-REKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSE 86 (262)
T ss_dssp HHHHHHH-TBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHhc-CCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 3455543 3456788999988873 47788899999996654222 22 124578
Q ss_pred HHHhhC-CCcccc-----h------hhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHH
Q psy11600 107 QIKEAG-MKVGQV-----L------QDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEY 174 (277)
Q Consensus 107 ~i~~~~-~~~~d~-----p------~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~ 174 (277)
++|+.. ..|+-+ | +++++..+++|+|.+.++-- ...+..+++ +.
T Consensus 87 ~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl---~~ee~~~~~---------------------~~ 142 (262)
T 2ekc_A 87 TLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDL---PPEEAEELK---------------------AV 142 (262)
T ss_dssp HHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTC---CHHHHHHHH---------------------HH
T ss_pred HHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCC---CHHHHHHHH---------------------HH
Confidence 888775 444321 2 67888899999998888632 333322222 34
Q ss_pred HhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC-CC-cccc-cCHHHHHHH
Q psy11600 175 IESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF-GG-QKFM-QDMMPKVKW 251 (277)
Q Consensus 175 i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~-gg-q~F~-~~~~~kI~~ 251 (277)
++..++-++..+.|.++. ++++.+.+....+...+ ++ .|. |. ..+. ++..+.+++
T Consensus 143 ~~~~gl~~i~l~~p~t~~--------~rl~~ia~~a~gfiy~v--s~------------~g~TG~~~~~~~~~~~~~v~~ 200 (262)
T 2ekc_A 143 MKKYVLSFVPLGAPTSTR--------KRIKLICEAADEMTYFV--SV------------TGTTGAREKLPYERIKKKVEE 200 (262)
T ss_dssp HHHTTCEECCEECTTCCH--------HHHHHHHHHCSSCEEEE--SS------------CC---------CHHHHHHHHH
T ss_pred HHHcCCcEEEEeCCCCCH--------HHHHHHHHhCCCCEEEE--ec------------CCccCCCCCcCcccHHHHHHH
Confidence 455554444445676652 34555555555553322 11 232 22 2333 445688888
Q ss_pred HHhhCCCCeEEEeCCCC-ccCHHHhh
Q psy11600 252 LRENYPTLNIEVDGGVG-PNTIDECA 276 (277)
Q Consensus 252 l~~~~~~~~I~VDGGI~-~~~~~~~~ 276 (277)
+|+.. +..+.|+|||+ +++++++.
T Consensus 201 vr~~~-~~pv~vG~GI~t~e~~~~~~ 225 (262)
T 2ekc_A 201 YRELC-DKPVVVGFGVSKKEHAREIG 225 (262)
T ss_dssp HHHHC-CSCEEEESSCCSHHHHHHHH
T ss_pred HHhhc-CCCEEEeCCCCCHHHHHHHH
Confidence 88865 56799999998 88887753
No 74
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.89 E-value=0.0017 Score=56.49 Aligned_cols=167 Identities=15% Similarity=0.179 Sum_probs=105.6
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a 86 (277)
.+.|=+-..|..++.+-++.+.+.|++.+.+..-+ ..+.+.++.+++.++++.+-+.. +.++ +.++...++
T Consensus 18 ~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~l~vgaGt-vl~~-d~~~~A~~a 88 (224)
T 1vhc_A 18 KIVPVIALDNADDILPLADTLAKNGLSVAEITFRS-------EAAADAIRLLRANRPDFLIAAGT-VLTA-EQVVLAKSS 88 (224)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTCEEEEES-CCSH-HHHHHHHHH
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccC-------chHHHHHHHHHHhCcCcEEeeCc-EeeH-HHHHHHHHC
Confidence 35565556677888888999999999998887322 23567899999999998888886 4443 778889999
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCC--cc-cchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeC
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMK--VG-QVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIK 163 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~--~~-d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~ 163 (277)
|+|.+ |.-..| +.+++..|+.... +. ..|.+. ....++|+|++.|
T Consensus 89 GAd~v--~~p~~d--~~v~~~ar~~g~~~i~Gv~t~~e~-~~A~~~Gad~vk~--------------------------- 136 (224)
T 1vhc_A 89 GADFV--VTPGLN--PKIVKLCQDLNFPITPGVNNPMAI-EIALEMGISAVKF--------------------------- 136 (224)
T ss_dssp TCSEE--ECSSCC--HHHHHHHHHTTCCEECEECSHHHH-HHHHHTTCCEEEE---------------------------
T ss_pred CCCEE--EECCCC--HHHHHHHHHhCCCEEeccCCHHHH-HHHHHCCCCEEEE---------------------------
Confidence 99999 754333 3344444432211 10 002211 1112233333332
Q ss_pred CCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHc-cCCC--CCcc
Q psy11600 164 PKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKC-LTGF--GGQK 240 (277)
Q Consensus 164 p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~-gpg~--ggq~ 240 (277)
-|... .- -++.++.++...+++.+..-|||+.+|+.++.++ |... ||..
T Consensus 137 -----------------------Fpa~~---~g--G~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~gS~i 188 (224)
T 1vhc_A 137 -----------------------FPAEA---SG--GVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACGGSWF 188 (224)
T ss_dssp -----------------------TTTTT---TT--HHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEEECGG
T ss_pred -----------------------eeCcc---cc--CHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEEEchh
Confidence 23110 00 0345677777778899999999999999999998 6554 4444
Q ss_pred cc
Q psy11600 241 FM 242 (277)
Q Consensus 241 F~ 242 (277)
+.
T Consensus 189 ~~ 190 (224)
T 1vhc_A 189 VE 190 (224)
T ss_dssp GC
T ss_pred cC
Confidence 43
No 75
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.89 E-value=8.6e-05 Score=64.92 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=62.7
Q ss_pred EEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHh
Q psy11600 36 HLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKE 110 (277)
Q Consensus 36 h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~ 110 (277)
-+|++||..|.-..|. + . -...+|.+.++.+.++|+++++++--...+ ....++++++
T Consensus 9 ~id~~~g~~v~~~~~~--------~----~-----~~~~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~ 71 (253)
T 1thf_D 9 CLDVKDGRVVKGSNFE--------N----L-----RDSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAE 71 (253)
T ss_dssp EEEEETTEECCCSCCT--------T----S-----SCTTCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHT
T ss_pred EEEEECCEEEEeeccc--------c----e-----eeccCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHH
Confidence 3899999988554431 1 1 144689999999999999999766211121 4667888888
Q ss_pred hCCCcccc-----hhhhhHHHHhcCCCeEEeecC
Q psy11600 111 AGMKVGQV-----LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 111 ~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E 139 (277)
.+..|+.+ ..+.++.+.++|||.+.+|.+
T Consensus 72 ~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 72 QIDIPFTVGGGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp TCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred hCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 77777654 334588899999999999876
No 76
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.88 E-value=0.00088 Score=57.93 Aligned_cols=163 Identities=12% Similarity=0.189 Sum_probs=102.6
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a 86 (277)
.+.|-+=..|..++-+-++.+.+.|++++.+..-+ ..+.+.++.+++.++++.+-+.. +.+. +.++...++
T Consensus 17 ~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~vgagt-vi~~-d~~~~A~~a 87 (214)
T 1wbh_A 17 PVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRT-------ECAVDAIRAIAKEVPEAIVGAGT-VLNP-QQLAEVTEA 87 (214)
T ss_dssp SEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCS-------TTHHHHHHHHHHHCTTSEEEEES-CCSH-HHHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCC-------hhHHHHHHHHHHHCcCCEEeeCE-EEEH-HHHHHHHHc
Confidence 46666666788888888999999999998887322 23567899999889998888887 5554 678889999
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeE-EeecCCCCChHHHHHHHHHhCCccceeeCCC
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQY-TFHVEPVDNVPQVIRQIKEAGMKVGLAIKPK 165 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~i-t~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~ 165 (277)
|+|++ |.-..| +.+++..++ .|.+++ ..| ++.++.+.. +
T Consensus 88 GAd~v--~~p~~d--~~v~~~~~~------------------~g~~~i~G~~-----t~~e~~~A~-~------------ 127 (214)
T 1wbh_A 88 GAQFA--ISPGLT--EPLLKAATE------------------GTIPLIPGIS-----TVSELMLGM-D------------ 127 (214)
T ss_dssp TCSCE--EESSCC--HHHHHHHHH------------------SSSCEEEEES-----SHHHHHHHH-H------------
T ss_pred CCCEE--EcCCCC--HHHHHHHHH------------------hCCCEEEecC-----CHHHHHHHH-H------------
Confidence 99999 644333 222222222 222222 111 222221111 1
Q ss_pred CCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHc-cCCC
Q psy11600 166 TPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKC-LTGF 236 (277)
Q Consensus 166 t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~-gpg~ 236 (277)
.-+|++- +-|..+ .- -++.++.++...+++.+..-|||+.+|+.++.++ |...
T Consensus 128 ----------~Gad~v~---~Fpa~~---~g--G~~~lk~i~~~~~~ipvvaiGGI~~~n~~~~l~agg~~~ 181 (214)
T 1wbh_A 128 ----------YGLKEFK---FFPAEA---NG--GVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLC 181 (214)
T ss_dssp ----------TTCCEEE---ETTTTT---TT--HHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBSC
T ss_pred ----------CCCCEEE---EecCcc---cc--CHHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcCCCeE
Confidence 1133322 233111 00 0344677777778899999999999999999998 5554
No 77
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.84 E-value=0.00023 Score=62.83 Aligned_cols=182 Identities=16% Similarity=0.101 Sum_probs=103.7
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccccc----cccCCCCCH----HHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCC
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMDGT----FVPNLTFGH----PVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVD 89 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimDg~----fvp~~~~g~----~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d 89 (277)
.++.+.++.+.+.|++++|+=-=+.. |- .... +..+++++. ++ ...+.+++.+..+. ..+.|+|
T Consensus 43 ~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~---~l~~~~~~~~a~~l~~l-~~-~~~~~liInd~~~l---A~~~gAd 114 (243)
T 3o63_A 43 GDLAQFAEAALAGGVDIIQLRDKGSPGELRFG---PLQARDELAACEILADA-AH-RYGALFAVNDRADI---ARAAGAD 114 (243)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCTTCHHHHHHC---SCCHHHHHHHHHHHHHH-HH-HTTCEEEEESCHHH---HHHHTCS
T ss_pred chHHHHHHHHHHCCCCEEEEccCCCCcccccc---CCCHHHHHHHHHHHHHH-HH-hhCCEEEEeCHHHH---HHHhCCC
Confidence 46888999888999999998654411 00 0111 122334432 11 23577888776654 4566999
Q ss_pred eEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHH
Q psy11600 90 QYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVD 169 (277)
Q Consensus 90 ~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~ 169 (277)
.+ |+...|.....+ +.+ .+...-+|+.+.++ +
T Consensus 115 GV--HLg~~dl~~~~~-------------------------------------------r~~--~~~~~~iG~S~ht~-~ 146 (243)
T 3o63_A 115 VL--HLGQRDLPVNVA-------------------------------------------RQI--LAPDTLIGRSTHDP-D 146 (243)
T ss_dssp EE--EECTTSSCHHHH-------------------------------------------HHH--SCTTCEEEEEECSH-H
T ss_pred EE--EecCCcCCHHHH-------------------------------------------HHh--hCCCCEEEEeCCCH-H
Confidence 98 877655321111 111 12122233333332 2
Q ss_pred hHHHH-HhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhC-CCccEEEeCCCCcCcHHHHHHccCCC---CCcccc-c
Q psy11600 170 VIAEY-IESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENY-PTLNIEVDGGVGPNTIDECAKCLTGF---GGQKFM-Q 243 (277)
Q Consensus 170 ~i~~~-i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~-~~~~i~vdGgV~~~tv~~~~~~gpg~---ggq~F~-~ 243 (277)
++... -..+|++.+..+.|..+-+...+.-++.++++++.. .++-+...|||+.+++.++.++|++. ++..|. +
T Consensus 147 Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gvav~sai~~a~ 226 (243)
T 3o63_A 147 QVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSAD 226 (243)
T ss_dssp HHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEEESHHHHTCS
T ss_pred HHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEEEeHHHhCCC
Confidence 22222 234666665555444322222223356677776543 47889999999999999999999996 666666 5
Q ss_pred CHHHHHHHHHhh
Q psy11600 244 DMMPKVKWLREN 255 (277)
Q Consensus 244 ~~~~kI~~l~~~ 255 (277)
+..+.++++++.
T Consensus 227 dp~~a~~~l~~~ 238 (243)
T 3o63_A 227 DPRAAAEQLRSA 238 (243)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 778888887753
No 78
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=97.82 E-value=0.00044 Score=62.42 Aligned_cols=154 Identities=14% Similarity=0.105 Sum_probs=94.7
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCC---CC---CHHHHHHHHhhCCCcccc---h---------------hhhhHHHHh
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPV---DN---VPQVIRQIKEAGMKVGQV---L---------------QDWIEPMAD 128 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~---d~---g~~~i~~i~~~~~~~~d~---p---------------~~~i~~~~~ 128 (277)
+.+++. +....++|||+| ++... .| ++.+++++++....|+-+ | .+-|+.+.+
T Consensus 46 ~~s~~~-a~~A~~gGAdRI--ELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 46 VDSVES-AVNAERGGADRI--ELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp ESSHHH-HHHHHHHTCSEE--EECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred eCCHHH-HHHHHHhCCCEE--EECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 334443 445677899999 54421 12 899999999977665432 2 357899999
Q ss_pred cCCCeEEeec---CCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHH
Q psy11600 129 ANVDQYTFHV---EPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKW 205 (277)
Q Consensus 129 ~g~d~it~H~---E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~ 205 (277)
+|||.|.|+. |..-+.....++++..+ ++ .+++++.|. ...+-.+-+++
T Consensus 123 ~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~---~l----------------------~vTFHRAFD---~~~d~~~Ale~ 174 (287)
T 3iwp_A 123 YGADGLVFGALTEDGHIDKELCMSLMAICR---PL----------------------PVTFHRAFD---MVHDPMAALET 174 (287)
T ss_dssp TTCSEEEECCBCTTSCBCHHHHHHHHHHHT---TS----------------------CEEECGGGG---GCSCHHHHHHH
T ss_pred cCCCEEEEeeeCCCCCcCHHHHHHHHHHcC---CC----------------------cEEEECchh---ccCCHHHHHHH
Confidence 9999999995 32224455556666543 11 234555432 11223444566
Q ss_pred HHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhh-CCCCeEEEeCCCCccCHHHhh
Q psy11600 206 LRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLREN-YPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 206 l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~-~~~~~I~VDGGI~~~~~~~~~ 276 (277)
+.++ +++.++-. |++.-..+-++.+++|.++ ...+.|.++||||.+|++++.
T Consensus 175 Li~l--GvdrILTS-----------------G~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~ 227 (287)
T 3iwp_A 175 LLTL--GFERVLTS-----------------GCDSSALEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRIL 227 (287)
T ss_dssp HHHH--TCSEEEEC-----------------TTSSSTTTTHHHHHHHHHHHTTSSEEEECTTCCTTTHHHHH
T ss_pred HHHc--CCCEEECC-----------------CCCCChHHhHHHHHHHHHHhCCCCEEEECCCcCHHHHHHHH
Confidence 6554 45544311 2222224556677776654 346899999999999998874
No 79
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.81 E-value=0.00025 Score=63.63 Aligned_cols=173 Identities=11% Similarity=0.072 Sum_probs=114.3
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCC--CCCHHHHHHHHhhCCCcccc----hhhh-hHHHHhcCCCeEEeecCCCC--ChH
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPV--DNVPQVIRQIKEAGMKVGQV----LQDW-IEPMADANVDQYTFHVEPVD--NVP 145 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~--d~g~~~i~~i~~~~~~~~d~----p~~~-i~~~~~~g~d~it~H~E~~~--~~~ 145 (277)
+|.+..+.+.++|++++++.-|.. .|.+..++++|+....|+.. ...| ++...++|||.|.+....-. ...
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~ 152 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLV 152 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHH
Confidence 688889999999999997765543 23688999999988777643 4555 88889999999998643000 233
Q ss_pred HHHHHHHHhCCccceeeCCCCCHHhHHHHHh-hcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC-CccEEEeCCCC-
Q psy11600 146 QVIRQIKEAGMKVGLAIKPKTPVDVIAEYIE-SADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVG- 222 (277)
Q Consensus 146 ~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~-~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV~- 222 (277)
.+.+..++.|+..-+.+ .+.+++...+. .+|+ +.+|+.. ...|- .-++.+.++.+..+ ++.+..-|||+
T Consensus 153 ~l~~~a~~lGl~~lvev---~t~ee~~~A~~~Gad~---IGv~~r~-l~~~~-~dl~~~~~l~~~v~~~~pvVaegGI~t 224 (272)
T 3qja_A 153 SMLDRTESLGMTALVEV---HTEQEADRALKAGAKV---IGVNARD-LMTLD-VDRDCFARIAPGLPSSVIRIAESGVRG 224 (272)
T ss_dssp HHHHHHHHTTCEEEEEE---SSHHHHHHHHHHTCSE---EEEESBC-TTTCC-BCTTHHHHHGGGSCTTSEEEEESCCCS
T ss_pred HHHHHHHHCCCcEEEEc---CCHHHHHHHHHCCCCE---EEECCCc-ccccc-cCHHHHHHHHHhCcccCEEEEECCCCC
Confidence 45556666665543332 23455544432 2443 3445422 11121 12455666666665 67888899998
Q ss_pred cCcHHHHHHccCCC---CCcccc-cCHHHHHHHHHhh
Q psy11600 223 PNTIDECAKCLTGF---GGQKFM-QDMMPKVKWLREN 255 (277)
Q Consensus 223 ~~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~~ 255 (277)
.+++..+.++|++. |+..+. ++..+.+++|.+.
T Consensus 225 ~edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~~ 261 (272)
T 3qja_A 225 TADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTA 261 (272)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHhh
Confidence 88999999999884 666665 5788888888764
No 80
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.78 E-value=0.002 Score=56.09 Aligned_cols=166 Identities=11% Similarity=0.124 Sum_probs=103.2
Q ss_pred EeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcC
Q psy11600 8 IGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADAN 87 (277)
Q Consensus 8 ~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag 87 (277)
|.|=+-..|..++-+-++.+.+.|++.+.+..-+ ..+.+.++.+++.+|++.+-+.. +.+. +.++...++|
T Consensus 28 ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~igagt-vl~~-d~~~~A~~aG 98 (225)
T 1mxs_A 28 ILPVITIAREEDILPLADALAAGGIRTLEVTLRS-------QHGLKAIQVLREQRPELCVGAGT-VLDR-SMFAAVEAAG 98 (225)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSS-------THHHHHHHHHHHHCTTSEEEEEC-CCSH-HHHHHHHHHT
T ss_pred EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCC-------ccHHHHHHHHHHhCcccEEeeCe-EeeH-HHHHHHHHCC
Confidence 4554445577778888999999999998887322 23457899899889998888887 4444 6788899999
Q ss_pred CCeEEEeccCCCCCHHHHHHHHhhCCC--cc-cchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCC
Q psy11600 88 VDQYTFHVEPVDNVPQVIRQIKEAGMK--VG-QVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKP 164 (277)
Q Consensus 88 ~d~i~~H~e~~d~g~~~i~~i~~~~~~--~~-d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p 164 (277)
+|++ |.-..| +.+++..++.... +. ..|.+. ....++|+|++.|
T Consensus 99 Ad~v--~~p~~d--~~v~~~~~~~g~~~i~G~~t~~e~-~~A~~~Gad~vk~---------------------------- 145 (225)
T 1mxs_A 99 AQFV--VTPGIT--EDILEAGVDSEIPLLPGISTPSEI-MMGYALGYRRFKL---------------------------- 145 (225)
T ss_dssp CSSE--ECSSCC--HHHHHHHHHCSSCEECEECSHHHH-HHHHTTTCCEEEE----------------------------
T ss_pred CCEE--EeCCCC--HHHHHHHHHhCCCEEEeeCCHHHH-HHHHHCCCCEEEE----------------------------
Confidence 9999 654333 3333333322211 10 002211 1112233333333
Q ss_pred CCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHH-ccCCC--CCccc
Q psy11600 165 KTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAK-CLTGF--GGQKF 241 (277)
Q Consensus 165 ~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~-~gpg~--ggq~F 241 (277)
-| .+... =++.++.++...+++.+..-|||+.+|+.++.+ .|++. ||..|
T Consensus 146 ----------------------FP---a~~~~--G~~~lk~i~~~~~~ipvvaiGGI~~~N~~~~l~~~Ga~~v~gSai~ 198 (225)
T 1mxs_A 146 ----------------------FP---AEISG--GVAAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCVGTTWML 198 (225)
T ss_dssp ----------------------TT---HHHHT--HHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHHSTTBCCEEECTTS
T ss_pred ----------------------cc---Ccccc--CHHHHHHHHhhCCCCeEEEECCCCHHHHHHHHhccCCEEEEEchhc
Confidence 22 10000 034466777777889999999999999999999 67875 45555
Q ss_pred c
Q psy11600 242 M 242 (277)
Q Consensus 242 ~ 242 (277)
.
T Consensus 199 ~ 199 (225)
T 1mxs_A 199 D 199 (225)
T ss_dssp C
T ss_pred C
Confidence 4
No 81
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.74 E-value=0.0017 Score=58.27 Aligned_cols=172 Identities=13% Similarity=0.152 Sum_probs=105.9
Q ss_pred HHHHHHhcCCCCeeeeeeeccCcHH-----hHHHHHhcCCCeEEEeccC----CCC-------------------CHHHH
Q psy11600 54 VVKCLRNKIPKAFFETHMMVQNPQQ-----WIEPMADANVDQYTFHVEP----VDN-------------------VPQVI 105 (277)
Q Consensus 54 ~v~~l~~~~~~~~~d~Hlmv~~p~~-----~i~~l~~ag~d~i~~H~e~----~d~-------------------g~~~i 105 (277)
..+++|+. -+..+-.+++..+|.- .++.+.++|+|++.+-+-- .|| ..+++
T Consensus 10 ~f~~~~~~-~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v 88 (271)
T 3nav_A 10 LFQRLSAA-QQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELI 88 (271)
T ss_dssp HHHHHHHT-TBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHhc-CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 34556654 4567888999999743 3777888999999555332 244 24577
Q ss_pred HHHHhh-CCCccc-c----------hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHH
Q psy11600 106 RQIKEA-GMKVGQ-V----------LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAE 173 (277)
Q Consensus 106 ~~i~~~-~~~~~d-~----------p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~ 173 (277)
+++|+. ...|+- + .++|++.++++|+|.+.+.=- .+++ .+.+.+
T Consensus 89 ~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDl---p~ee---------------------~~~~~~ 144 (271)
T 3nav_A 89 AQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADV---PTNE---------------------SQPFVA 144 (271)
T ss_dssp HHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTS---CGGG---------------------CHHHHH
T ss_pred HHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCC---CHHH---------------------HHHHHH
Confidence 777775 444432 2 366777788888887776311 1111 123445
Q ss_pred HHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCC--cccccCHHHHHHH
Q psy11600 174 YIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGG--QKFMQDMMPKVKW 251 (277)
Q Consensus 174 ~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~gg--q~F~~~~~~kI~~ 251 (277)
+++..++-++..+.|.++ .++++.+.+....+-..| . ..|.-| +.+.++..+.+++
T Consensus 145 ~~~~~gl~~I~lvap~t~--------~eri~~i~~~~~gfiY~v----s----------~~GvTG~~~~~~~~~~~~v~~ 202 (271)
T 3nav_A 145 AAEKFGIQPIFIAPPTAS--------DETLRAVAQLGKGYTYLL----S----------RAGVTGAETKANMPVHALLER 202 (271)
T ss_dssp HHHHTTCEEEEEECTTCC--------HHHHHHHHHHCCSCEEEC----C----------CC--------CCHHHHHHHHH
T ss_pred HHHHcCCeEEEEECCCCC--------HHHHHHHHHHCCCeEEEE----e----------ccCCCCcccCCchhHHHHHHH
Confidence 667777777777788775 356777766666663332 1 133322 2344456677888
Q ss_pred HHhhCCCCeEEEeCCCC-ccCHH
Q psy11600 252 LRENYPTLNIEVDGGVG-PNTID 273 (277)
Q Consensus 252 l~~~~~~~~I~VDGGI~-~~~~~ 273 (277)
+|+.. +.-+.|.|||+ +++++
T Consensus 203 vr~~~-~~Pv~vGfGIst~e~~~ 224 (271)
T 3nav_A 203 LQQFD-APPALLGFGISEPAQVK 224 (271)
T ss_dssp HHHTT-CCCEEECSSCCSHHHHH
T ss_pred HHHhc-CCCEEEECCCCCHHHHH
Confidence 88765 56799999995 78887
No 82
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=97.71 E-value=8.5e-05 Score=66.18 Aligned_cols=90 Identities=13% Similarity=0.117 Sum_probs=65.4
Q ss_pred eeccccCcccHHHHHHHHHHcC--CCE--EEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHH----hHH
Q psy11600 10 PSILNSDLSNLHSESQNLLDSG--ADY--LHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQ----WIE 81 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~--~~~--~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~----~i~ 81 (277)
+=|+++|+.++++.++.+++.+ +++ +|++++ ..+|++.+++||+. +.++-.+++..|..+ +++
T Consensus 29 ~LivALD~~~~~~al~l~~~l~~~v~~~KvG~~l~-------~~~G~~~v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~ 99 (255)
T 3ldv_A 29 KVIVALDYDNLADALAFVDKIDPSTCRLKVGKEMF-------TLFGPDFVRELHKR--GFSVFLDLKFHDIPNTCSKAVK 99 (255)
T ss_dssp CEEEEECCSSHHHHHHHHTTSCGGGCEEEEEHHHH-------HHHHHHHHHHHHHT--TCCEEEEEEECSCHHHHHHHHH
T ss_pred CeEEEcCCCCHHHHHHHHHHhCCcCcEEEeCHHHH-------HhhCHHHHHHHHhc--CCCEEEEEecccchhHHHHHHH
Confidence 3478999999999999988763 122 444443 46899999999985 555666666666544 467
Q ss_pred HHHhcCCCeEEEeccCCCCCHHHHHHHHhh
Q psy11600 82 PMADANVDQYTFHVEPVDNVPQVIRQIKEA 111 (277)
Q Consensus 82 ~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~ 111 (277)
.+.++|+|++|+|. -+|...+++.++.
T Consensus 100 ~~~~~gaD~vTVh~---~~G~~~~~~a~~~ 126 (255)
T 3ldv_A 100 AAAELGVWMVNVHA---SGGERMMAASREI 126 (255)
T ss_dssp HHHHTTCSEEEEEG---GGCHHHHHHHHHH
T ss_pred HHHhcCCCEEEEec---cCCHHHHHHHHHH
Confidence 78889999999996 3466777776543
No 83
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.66 E-value=0.00068 Score=58.47 Aligned_cols=86 Identities=19% Similarity=0.253 Sum_probs=60.3
Q ss_pred EEecccc--ccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCC--C---CHHHHHHH
Q psy11600 36 HLDVMDG--TFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVD--N---VPQVIRQI 108 (277)
Q Consensus 36 h~DimDg--~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d--~---g~~~i~~i 108 (277)
-+|+.|| ..|.-..+++ ++ ...++.+.++.+.++|+|+++++--... + ....++.+
T Consensus 10 ~id~~~g~~~~v~g~~~~~-----~~------------~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i 72 (253)
T 1h5y_A 10 CLDIDGGAKVVVKGVNFQG-----IR------------EVGDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRV 72 (253)
T ss_dssp EEEECGGGCEECTTCCCHH-----HH------------EEECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHH
T ss_pred EEEEcCCceEEEEcccccc-----ee------------ecccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHH
Confidence 4899999 8775444322 11 1347888999999999999977621111 1 46778888
Q ss_pred HhhCCCcccc------hhhhhHHHHhcCCCeEEeecC
Q psy11600 109 KEAGMKVGQV------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 109 ~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E 139 (277)
++.+..|+.+ |++ ++.+.++|||.|.+|.+
T Consensus 73 ~~~~~ipvi~~g~i~~~~~-~~~~~~~Gad~V~i~~~ 108 (253)
T 1h5y_A 73 AEAVSIPVLVGGGVRSLED-ATTLFRAGADKVSVNTA 108 (253)
T ss_dssp HHHCSSCEEEESSCCSHHH-HHHHHHHTCSEEEESHH
T ss_pred HHhcCCCEEEECCCCCHHH-HHHHHHcCCCEEEEChH
Confidence 8887666543 444 58888899999999865
No 84
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.65 E-value=0.00055 Score=58.02 Aligned_cols=148 Identities=9% Similarity=0.071 Sum_probs=84.1
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCC----CHHHHHHHHhhCCC--cccchhhhhHHHHhcCCCeEEeecCCCCChHHHH
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDN----VPQVIRQIKEAGMK--VGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVI 148 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~----g~~~i~~i~~~~~~--~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~ 148 (277)
++.+.++.+.++|++++ |+...+. ..+.++++++.+.. ..-+..++++.+.++|+|.+. ++ ....
T Consensus 27 ~~~~~~~~~~~~G~~~i--~l~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~~~~~a~~~gad~v~--l~---~~~~-- 97 (215)
T 1xi3_A 27 PEVESVREALEGGATAI--QMRIKNAPTREMYEIGKTLRQLTREYDALFFVDDRVDVALAVDADGVQ--LG---PEDM-- 97 (215)
T ss_dssp CHHHHHHHHHHTTCSEE--EECCCSCCHHHHHHHHHHHHHHHHHTTCEEEEESCHHHHHHHTCSEEE--EC---TTSC--
T ss_pred hHHHHHHHHHHCCCCEE--EECCCCCCHHHHHHHHHHHHHHHHHcCCeEEEcChHHHHHHcCCCEEE--EC---CccC--
Confidence 56688999999999999 6553332 24556666654321 111124677888888888874 43 2211
Q ss_pred HHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHH
Q psy11600 149 RQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDE 228 (277)
Q Consensus 149 ~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~ 228 (277)
+.+.+..+. .+++.++++ .++ . .+..... ..++..+.+++.
T Consensus 98 ------------------~~~~~~~~~--~~~~~~v~~--~t~-----~----e~~~~~~--~g~d~i~~~~~~------ 138 (215)
T 1xi3_A 98 ------------------PIEVAKEIA--PNLIIGASV--YSL-----E----EALEAEK--KGADYLGAGSVF------ 138 (215)
T ss_dssp ------------------CHHHHHHHC--TTSEEEEEE--SSH-----H----HHHHHHH--HTCSEEEEECSS------
T ss_pred ------------------CHHHHHHhC--CCCEEEEec--CCH-----H----HHHHHHh--cCCCEEEEcCCc------
Confidence 223333332 455555544 221 1 1222222 245666544442
Q ss_pred HHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 229 CAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 229 ~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
|+.+.+.+.+..++.++++++.. ++.+.++||||++|++++.
T Consensus 139 -----~~~~~~~~~~~~~~~l~~l~~~~-~~pvia~GGI~~~nv~~~~ 180 (215)
T 1xi3_A 139 -----PTKTKEDARVIGLEGLRKIVESV-KIPVVAIGGINKDNAREVL 180 (215)
T ss_dssp -----CC----CCCCCHHHHHHHHHHHC-SSCEEEESSCCTTTHHHHH
T ss_pred -----cCCCCCCCCCcCHHHHHHHHHhC-CCCEEEECCcCHHHHHHHH
Confidence 33333334555677888887654 5679999999999998875
No 85
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=97.56 E-value=0.00053 Score=62.64 Aligned_cols=133 Identities=12% Similarity=0.038 Sum_probs=75.5
Q ss_pred HHHHHHHhcCCCCeeeeeeecc----CcH--HhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHH
Q psy11600 53 PVVKCLRNKIPKAFFETHMMVQ----NPQ--QWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPM 126 (277)
Q Consensus 53 ~~v~~l~~~~~~~~~d~Hlmv~----~p~--~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~ 126 (277)
+.++++|+. ++.|+.+++++. ++. ++++.+.++|++.+++|.+. .+++++
T Consensus 57 ~~i~~i~~~-~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~---p~~~~~-------------------- 112 (328)
T 2gjl_A 57 AEIARCREL-TDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND---PGEHIA-------------------- 112 (328)
T ss_dssp HHHHHHHHH-CSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC---CHHHHH--------------------
T ss_pred HHHHHHHHh-cCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC---cHHHHH--------------------
Confidence 346777775 788999999996 343 67888888888888887642 123333
Q ss_pred HhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCC-CCCchhhhhhhhhHHH
Q psy11600 127 ADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPG-FGGQKFMQDMMPKVKW 205 (277)
Q Consensus 127 ~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pg-t~gq~~~~~~l~kI~~ 205 (277)
.+++.|.+... ++.++-+....+-..+|.+++....+| ..|. +....++.+.+
T Consensus 113 -----------------------~l~~~gi~vi~--~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~-~~~~~~~~l~~ 166 (328)
T 2gjl_A 113 -----------------------EFRRHGVKVIH--KCTAVRHALKAERLGVDAVSIDGFECAGHPGE-DDIPGLVLLPA 166 (328)
T ss_dssp -----------------------HHHHTTCEEEE--EESSHHHHHHHHHTTCSEEEEECTTCSBCCCS-SCCCHHHHHHH
T ss_pred -----------------------HHHHcCCCEEe--eCCCHHHHHHHHHcCCCEEEEECCCCCcCCCC-ccccHHHHHHH
Confidence 33333322221 111111111111223566655444443 2132 11223445555
Q ss_pred HHhhCCCccEEEeCCC-CcCcHHHHHHccCCC
Q psy11600 206 LRENYPTLNIEVDGGV-GPNTIDECAKCLTGF 236 (277)
Q Consensus 206 l~~~~~~~~i~vdGgV-~~~tv~~~~~~gpg~ 236 (277)
+++.. ++.+.++||| +.+++..+.+.|++.
T Consensus 167 v~~~~-~iPviaaGGI~~~~~v~~al~~GAdg 197 (328)
T 2gjl_A 167 AANRL-RVPIIASGGFADGRGLVAALALGADA 197 (328)
T ss_dssp HHTTC-CSCEEEESSCCSHHHHHHHHHHTCSE
T ss_pred HHHhc-CCCEEEECCCCCHHHHHHHHHcCCCE
Confidence 55432 5779999999 578898888888885
No 86
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.54 E-value=0.0002 Score=62.12 Aligned_cols=162 Identities=13% Similarity=0.144 Sum_probs=89.1
Q ss_pred cccccCCCCCHHHHHHHHhcCCCCeeee-eeeccCcHHh-----HHHHHhcCCCeEEE-eccCCCCCHHHHHHHHhhCCC
Q psy11600 42 GTFVPNLTFGHPVVKCLRNKIPKAFFET-HMMVQNPQQW-----IEPMADANVDQYTF-HVEPVDNVPQVIRQIKEAGMK 114 (277)
Q Consensus 42 g~fvp~~~~g~~~v~~l~~~~~~~~~d~-Hlmv~~p~~~-----i~~l~~ag~d~i~~-H~e~~d~g~~~i~~i~~~~~~ 114 (277)
-.|.|++++ ++++|+. .++|+-+ ++-..+++.| ++.+.++|+|++++ |.|-.- .+.
T Consensus 36 ~~~~~~~~~----l~~v~~~-~~~~v~aqd~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l-~~~----------- 98 (219)
T 2h6r_A 36 IGVAPQFVD----LRMIVEN-VNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRM-LLA----------- 98 (219)
T ss_dssp EEEECCTTT----HHHHHHH-CCSCBEESCCCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCC-BHH-----------
T ss_pred EEEECCHHH----HHHHHHH-cCCcEEEEECChhhcCCccCchHHHHHHHcCCCEEEECCccccC-CHH-----------
Confidence 368888776 5667765 4788833 3335566666 89999999999966 433111 000
Q ss_pred cccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCC---
Q psy11600 115 VGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFG--- 191 (277)
Q Consensus 115 ~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~--- 191 (277)
...+..+..++.|+..-+.+.+.+..+. +..++. .+++++|-+.
T Consensus 99 ----------------------------e~~~~~~~a~~~Gl~~iv~v~~~~e~~~----~~~~~~-~~i~~~~~~~iGt 145 (219)
T 2h6r_A 99 ----------------------------DIEAVINKCKNLGLETIVCTNNINTSKA----VAALSP-DCIAVEPPELIGT 145 (219)
T ss_dssp ----------------------------HHHHHHHHHHHHTCEEEEEESSSHHHHH----HTTTCC-SEEEECCCC----
T ss_pred ----------------------------HHHHHHHHHHHCCCeEEEEeCCchHHHH----HHhCCC-CEEEEEecccccc
Confidence 1122333334444443334433322211 111221 2466777442
Q ss_pred C---chhhhhhhh-hHHHHHhhCCCccEEEeCCCCc-CcHHHHHHccCCC---CCccccc-CHHHHHHHHH
Q psy11600 192 G---QKFMQDMMP-KVKWLRENYPTLNIEVDGGVGP-NTIDECAKCLTGF---GGQKFMQ-DMMPKVKWLR 253 (277)
Q Consensus 192 g---q~~~~~~l~-kI~~l~~~~~~~~i~vdGgV~~-~tv~~~~~~gpg~---ggq~F~~-~~~~kI~~l~ 253 (277)
| +.+.++.++ .++.++.+..++.+...|||+. +.++.+.+.|++. ||..+.+ +..+.+++|+
T Consensus 146 G~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~ 216 (219)
T 2h6r_A 146 GIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKAKNVEEAIRELI 216 (219)
T ss_dssp ----------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHHC
T ss_pred CCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHHH
Confidence 3 455444233 3344455545788999999985 7777788888885 7777774 6777776664
No 87
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=97.52 E-value=0.0012 Score=58.75 Aligned_cols=91 Identities=19% Similarity=0.161 Sum_probs=69.8
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEE-eccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHH----hHHH
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHL-DVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQ----WIEP 82 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~-DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~----~i~~ 82 (277)
+=++++|..++++.++.+++. .++ + ++.. ..|. ..+|++.+++||+. ++++-.+++..|..+ +++.
T Consensus 6 ~LivALD~~~~~~al~l~~~l-~~~--v~~~~KvG~~l~--~~~G~~~v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~~ 78 (259)
T 3tfx_A 6 PVIVALDLDNEEQLNKILSKL-GDP--HDVFVKVGMELF--YNAGIDVIKKLTQQ--GYKIFLDLKMHDIPNTVYNGAKA 78 (259)
T ss_dssp CEEEECCCSCHHHHHHHHHTT-CCG--GGCEEEECHHHH--HHHCHHHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHH
T ss_pred CeEEEeCCCCHHHHHHHHHHh-Ccc--cceEEEeCHHHH--HhcCHHHHHHHHHC--CCcEEEEecccccchHHHHHHHH
Confidence 447899999999999998876 354 4 5555 2233 35799999999985 889999999999775 4567
Q ss_pred HHhcCCCeEEEeccCCCCCHHHHHHHHh
Q psy11600 83 MADANVDQYTFHVEPVDNVPQVIRQIKE 110 (277)
Q Consensus 83 l~~ag~d~i~~H~e~~d~g~~~i~~i~~ 110 (277)
+.+.|+|++|+|. -+|...+++.++
T Consensus 79 ~~~~gad~vTVh~---~~G~~~~~aa~~ 103 (259)
T 3tfx_A 79 LAKLGITFTTVHA---LGGSQMIKSAKD 103 (259)
T ss_dssp HHTTTCSEEEEEG---GGCHHHHHHHHH
T ss_pred HHhcCCCEEEEcC---CCCHHHHHHHHH
Confidence 8888999999996 345666666543
No 88
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.44 E-value=0.011 Score=51.80 Aligned_cols=163 Identities=15% Similarity=0.205 Sum_probs=104.9
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a 86 (277)
.+.|=+-.-|.....+-.+.|.+.|++.+-+..-. | -+.+.++++++.+|++.+=+.- |.+ .++++...++
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t----~---~a~e~I~~l~~~~~~~~iGaGT-Vlt-~~~a~~Ai~A 105 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRS----D---AAVEAIRLLRQAQPEMLIGAGT-ILN-GEQALAAKEA 105 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTS----T---THHHHHHHHHHHCTTCEEEEEC-CCS-HHHHHHHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCC----C---CHHHHHHHHHHhCCCCEEeECC-cCC-HHHHHHHHHc
Confidence 46777777788888888999999999997664332 2 2568999999988887776664 445 6678899999
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCC
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKT 166 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t 166 (277)
|++++ |.-..+ + ++.+..++.|+..-.|+.
T Consensus 106 GA~fI--vsP~~~--~-------------------------------------------~vi~~~~~~gi~~ipGv~--- 135 (232)
T 4e38_A 106 GATFV--VSPGFN--P-------------------------------------------NTVRACQEIGIDIVPGVN--- 135 (232)
T ss_dssp TCSEE--ECSSCC--H-------------------------------------------HHHHHHHHHTCEEECEEC---
T ss_pred CCCEE--EeCCCC--H-------------------------------------------HHHHHHHHcCCCEEcCCC---
Confidence 99999 532222 3 344444443322211111
Q ss_pred CHHhHHHHHh-hcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC
Q psy11600 167 PVDVIAEYIE-SADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF 236 (277)
Q Consensus 167 ~~~~i~~~i~-~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ 236 (277)
+.+++...++ -+|++ -+-|... + .=.+.++.++.-++++.+..-|||+.+++.+..++|+..
T Consensus 136 TptEi~~A~~~Gad~v---K~FPa~~---~--gG~~~lkal~~p~p~ip~~ptGGI~~~n~~~~l~aGa~~ 198 (232)
T 4e38_A 136 NPSTVEAALEMGLTTL---KFFPAEA---S--GGISMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIPQVL 198 (232)
T ss_dssp SHHHHHHHHHTTCCEE---EECSTTT---T--THHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBC
T ss_pred CHHHHHHHHHcCCCEE---EECcCcc---c--cCHHHHHHHHHHhcCCCeeeEcCCCHHHHHHHHHCCCeE
Confidence 2222322222 23432 2244321 0 003456777777788999999999999999999988654
No 89
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.39 E-value=0.00093 Score=57.20 Aligned_cols=148 Identities=12% Similarity=0.064 Sum_probs=79.8
Q ss_pred cHHhHHHHHhcCCCeEEEeccCCCC-----C--HHHHHHHHhhCCC--cccchhhhhHHHHhcCCCeEEeecCCCCChHH
Q psy11600 76 PQQWIEPMADANVDQYTFHVEPVDN-----V--PQVIRQIKEAGMK--VGQVLQDWIEPMADANVDQYTFHVEPVDNVPQ 146 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~H~e~~d~-----g--~~~i~~i~~~~~~--~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~ 146 (277)
+.+.++.+.++|++++ |+...++ + ..+++.+++.+.. ..-+..++++.+.++|+|.+.+ + . .
T Consensus 33 ~~~~~~~~~~~G~~~i--~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~~~~~a~~~gad~v~l--~---~--~ 103 (227)
T 2tps_A 33 PVTVVQKALKGGATLY--QFREKGGDALTGEARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHI--G---Q--E 103 (227)
T ss_dssp HHHHHHHHHHHTCSEE--EECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEESCHHHHHHHTCSEEEE--C---T--T
T ss_pred HHHHHHHHHHCCCCEE--EEecCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEcCHHHHHHHcCCCEEEE--C---C--C
Confidence 4457889999999999 6554433 1 3555666554321 1111235667777778777633 3 1 0
Q ss_pred HHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcH
Q psy11600 147 VIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTI 226 (277)
Q Consensus 147 ~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv 226 (277)
. .++ ..+.+..+. ..+.+.|.++ .+ +..... ..++..+.|.+.
T Consensus 104 ~------------------~~~---~~~~~~~g~-~~~~~s~~t~-----~e----~~~a~~--~g~d~v~~~~v~---- 146 (227)
T 2tps_A 104 D------------------ANA---KEVRAAIGD-MILGVSAHTM-----SE----VKQAEE--DGADYVGLGPIY---- 146 (227)
T ss_dssp S------------------SCH---HHHHHHHTT-SEEEEEECSH-----HH----HHHHHH--HTCSEEEECCSS----
T ss_pred c------------------cCH---HHHHHhcCC-cEEEEecCCH-----HH----HHHHHh--CCCCEEEECCCc----
Confidence 0 112 222333342 2334445432 11 222222 245666544442
Q ss_pred HHHHHccCCCCCcc-cccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 227 DECAKCLTGFGGQK-FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 227 ~~~~~~gpg~ggq~-F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
|.++.+. +.+..++.++++++..+++.+.++||||++|+.++.
T Consensus 147 -------~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~ 190 (227)
T 2tps_A 147 -------PTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVI 190 (227)
T ss_dssp -------CCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHH
T ss_pred -------CCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHH
Confidence 3332222 334446778887776544679999999999998764
No 90
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=97.34 E-value=0.0031 Score=57.72 Aligned_cols=130 Identities=18% Similarity=0.224 Sum_probs=74.7
Q ss_pred HHHHHHHhcCCCCeeeeeeeccCc--HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcC
Q psy11600 53 PVVKCLRNKIPKAFFETHMMVQNP--QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADAN 130 (277)
Q Consensus 53 ~~v~~l~~~~~~~~~d~Hlmv~~p--~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g 130 (277)
+.++++|+. ++.|+-+++++.+| .+.++.+.++|++.+++|... .+.+++.+++.
T Consensus 67 ~~i~~i~~~-~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~---p~~~~~~l~~~------------------- 123 (326)
T 3bo9_A 67 KAISELRQK-TDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN---PTKYIRELKEN------------------- 123 (326)
T ss_dssp HHHHHHHTT-CSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC---CHHHHHHHHHT-------------------
T ss_pred HHHHHHHHh-cCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC---cHHHHHHHHHc-------------------
Confidence 346667764 67899999999766 567888889999999888652 13444444432
Q ss_pred CCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHh-hcCceEEEEecCCC-CCchhhhhhhhhHHHHHh
Q psy11600 131 VDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIE-SADLVLIMTVEPGF-GGQKFMQDMMPKVKWLRE 208 (277)
Q Consensus 131 ~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~-~~d~vl~mav~Pgt-~gq~~~~~~l~kI~~l~~ 208 (277)
|.+....+ ++.+......+ .+|.+.+....+|. .|+.. .++.+.++++
T Consensus 124 ------------------------g~~v~~~v---~s~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~---~~~ll~~i~~ 173 (326)
T 3bo9_A 124 ------------------------GTKVIPVV---ASDSLARMVERAGADAVIAEGMESGGHIGEVT---TFVLVNKVSR 173 (326)
T ss_dssp ------------------------TCEEEEEE---SSHHHHHHHHHTTCSCEEEECTTSSEECCSSC---HHHHHHHHHH
T ss_pred ------------------------CCcEEEEc---CCHHHHHHHHHcCCCEEEEECCCCCccCCCcc---HHHHHHHHHH
Confidence 22211111 11111111111 14444433333332 12211 2333444443
Q ss_pred hCCCccEEEeCCCC-cCcHHHHHHccCCC
Q psy11600 209 NYPTLNIEVDGGVG-PNTIDECAKCLTGF 236 (277)
Q Consensus 209 ~~~~~~i~vdGgV~-~~tv~~~~~~gpg~ 236 (277)
.. ++.+.++|||+ ..++..+.+.|++.
T Consensus 174 ~~-~iPviaaGGI~~~~dv~~al~~GA~g 201 (326)
T 3bo9_A 174 SV-NIPVIAAGGIADGRGMAAAFALGAEA 201 (326)
T ss_dssp HC-SSCEEEESSCCSHHHHHHHHHHTCSE
T ss_pred Hc-CCCEEEECCCCCHHHHHHHHHhCCCE
Confidence 32 57799999998 88998998999885
No 91
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.33 E-value=0.0018 Score=56.31 Aligned_cols=179 Identities=16% Similarity=0.186 Sum_probs=106.7
Q ss_pred EEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCC-CC-----CHHHHHHHH
Q psy11600 36 HLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPV-DN-----VPQVIRQIK 109 (277)
Q Consensus 36 h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~-d~-----g~~~i~~i~ 109 (277)
-+|+.||..|.-..| ... -...+|.+.++.+.++|+++++++ |.. ++ ....+++++
T Consensus 10 ~id~~~g~~v~~~~~------------~~~-----~~~~d~~~~a~~~~~~Gad~i~v~-d~~~~~~~~~~~~~~i~~i~ 71 (252)
T 1ka9_F 10 CLDVHAGRVVKGVNF------------VNL-----RDAGDPVEAARAYDEAGADELVFL-DISATHEERAILLDVVARVA 71 (252)
T ss_dssp EEEEETTEETTCCCS------------SCC-----SSTTCHHHHHHHHHHHTCSCEEEE-ECCSSTTCHHHHHHHHHHHH
T ss_pred EEEEECCEEEEeecc------------cCc-----eecCCHHHHHHHHHHcCCCEEEEE-cCCccccCccccHHHHHHHH
Confidence 379999988843332 111 134588899999999999999776 332 21 234578888
Q ss_pred hhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCc-cceeeCC----C--------------
Q psy11600 110 EAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMK-VGLAIKP----K-------------- 165 (277)
Q Consensus 110 ~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~-~g~~i~p----~-------------- 165 (277)
+....|+-+ ..+.++.+.++|||.+.+-..+-..+..+.+..+..|.. .-+++.+ |
T Consensus 72 ~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~ 151 (252)
T 1ka9_F 72 ERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTG 151 (252)
T ss_dssp TTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEE
T ss_pred HhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccC
Confidence 776666654 466788888999999988654111222344555555421 1233333 1
Q ss_pred -CCHHhHHHHHhh-cCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCc-CcHHHHHHccCCC
Q psy11600 166 -TPVDVIAEYIES-ADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKCLTGF 236 (277)
Q Consensus 166 -t~~~~i~~~i~~-~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~-~tv~~~~~~gpg~ 236 (277)
++.+......+. ++.++....+.....+.. -++.++++++.. ++-+..-|||+- +.+..+.+.|++.
T Consensus 152 ~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~---~~~~i~~l~~~~-~ipvia~GGI~~~~d~~~~~~~Gadg 221 (252)
T 1ka9_F 152 LHAVEWAVKGVELGAGEILLTSMDRDGTKEGY---DLRLTRMVAEAV-GVPVIASGGAGRMEHFLEAFQAGAEA 221 (252)
T ss_dssp EEHHHHHHHHHHHTCCEEEEEETTTTTTCSCC---CHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CcHHHHHHHHHHcCCCEEEEecccCCCCcCCC---CHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHHHCCCHH
Confidence 123333333333 555555544432111111 145556666543 567888999994 8899998888874
No 92
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=97.28 E-value=0.00039 Score=62.62 Aligned_cols=73 Identities=14% Similarity=0.135 Sum_probs=53.3
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeee--ccCcHHhHHHHHhcC
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMM--VQNPQQWIEPMADAN 87 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlm--v~~p~~~i~~l~~ag 87 (277)
|+++..+..+ .++++.+++.|+|++ ||+|.+++ +++++.+++. .+++|+| +.+|.+..+ ..++|
T Consensus 80 Pvi~~~~~~~-~~~~~~~~~aGad~v-----~~~~~~~~---~~~~~~~~~~----~~~i~l~~~v~~~~~~~~-a~~~G 145 (297)
T 2zbt_A 80 PVMAKVRIGH-FVEAMILEAIGVDFI-----DESEVLTP---ADEEHHIDKW----KFKVPFVCGARNLGEALR-RIAEG 145 (297)
T ss_dssp CEEEEEETTC-HHHHHHHHHTTCSEE-----EEETTSCC---SCSSCCCCGG----GCSSCEEEEESSHHHHHH-HHHTT
T ss_pred CeEEEeccCC-HHHHHHHHHCCCCEE-----eeeCCCCh---HHHHHHHHHh----CCCceEEeecCCHHHHHH-HHHcC
Confidence 5555555444 788999999999996 67887653 3445555543 3478999 778988765 57899
Q ss_pred CCeEEEecc
Q psy11600 88 VDQYTFHVE 96 (277)
Q Consensus 88 ~d~i~~H~e 96 (277)
+|++++|.+
T Consensus 146 ad~I~v~G~ 154 (297)
T 2zbt_A 146 AAMIRTKGE 154 (297)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEccc
Confidence 999999954
No 93
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.28 E-value=0.0004 Score=60.28 Aligned_cols=176 Identities=13% Similarity=0.185 Sum_probs=104.8
Q ss_pred ccccCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhH----HHHHh
Q psy11600 12 ILNSDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWI----EPMAD 85 (277)
Q Consensus 12 ~~~~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i----~~l~~ 85 (277)
++++|. ++.++.+++. .++ +++.- ..|. ..+|++.+++|++. .++++-.+++..|..+.+ +.+.+
T Consensus 5 ivALD~---~~al~l~~~l-~~~--v~~~KvG~~l~--~~~G~~~v~~L~~~-~g~~VflDlK~~DIpnTv~~a~~~~~~ 75 (215)
T 3ve9_A 5 ILSLDS---PIPEETLRKL-NGK--VAGIKVGWPLL--LNLGKEKVKELVGL-VDGIKILDLKLADIDNTMILIVDELKD 75 (215)
T ss_dssp EEEESS---CCCHHHHHHH-HTT--SSEEEEEHHHH--HHHCHHHHHHHHTT-CCSEEEEEEEECSCHHHHHHHHHHHTT
T ss_pred EEECCH---HHHHHHHHHh-CCc--CcEEEecHHHH--HhhCHHHHHHHHHh-cCCcEEEEecccCchhHHHHHHHHHHH
Confidence 567788 3334443333 122 33333 1233 35899999999984 488999999999977653 66778
Q ss_pred cCCCeEEEeccCCCCC-HHHHHHHHhhCCCcc---cc--hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccc
Q psy11600 86 ANVDQYTFHVEPVDNV-PQVIRQIKEAGMKVG---QV--LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG 159 (277)
Q Consensus 86 ag~d~i~~H~e~~d~g-~~~i~~i~~~~~~~~---d~--p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g 159 (277)
. +|++|+|.-. | ++.++.. +...... .+ +. +. -+ ...+..+..++.|. .|
T Consensus 76 ~-ad~vTvh~~~---G~~~~~~~~-~~~~~v~vLts~s~~~-~~--------------~~---~v~~~a~~a~~~G~-~G 131 (215)
T 3ve9_A 76 I-TNSFIAHAFV---GVEGSLASL-SQRVDLFLVLSMSHPG-WN--------------DA---FYPYLREVARRVNP-KG 131 (215)
T ss_dssp T-CSEEEEEGGG---CTTTTHHHH-HHHSEEEEECCCSSTT-CC--------------GG---GHHHHHHHHHHHCC-SE
T ss_pred h-hheEEEeCCC---CcHHHHHhH-hcCCCEEEEEecCCcc-hH--------------HH---HHHHHHHHHHHcCC-Cc
Confidence 8 9999999643 3 3445544 1111110 00 10 00 11 23344444444431 01
Q ss_pred eeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcC--cHHHHHHccCCC-
Q psy11600 160 LAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPN--TIDECAKCLTGF- 236 (277)
Q Consensus 160 ~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~--tv~~~~~~gpg~- 236 (277)
+ |.++|.. +.++.+++..++ -+.|+|||+.. |..++.++|+++
T Consensus 132 ------------------------v-V~sat~~--------~e~~~ir~~~~~-f~~v~pGI~~~g~~~~~a~~~Gad~i 177 (215)
T 3ve9_A 132 ------------------------F-VAPATRP--------SMISRVKGDFPD-KLVISPGVGTQGAKPGIALCHGADYE 177 (215)
T ss_dssp ------------------------E-ECCTTSH--------HHHHHHHHHCTT-SEEEECCTTSTTCCTTHHHHTTCSEE
T ss_pred ------------------------e-eeCCCCH--------HHHHHHHHhCCC-cEEEcCCCCcCcCCHHHHHHcCCCEE
Confidence 1 2333321 236667777777 57889999998 888899999997
Q ss_pred --CCcccc-cCHHHHHHHHHh
Q psy11600 237 --GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 237 --ggq~F~-~~~~~kI~~l~~ 254 (277)
|...|. ++..+.++++++
T Consensus 178 VvGr~I~~a~dp~~a~~~i~~ 198 (215)
T 3ve9_A 178 IVGRSVYQSADPVRKLEEIVR 198 (215)
T ss_dssp EECHHHHTSSSHHHHHHHHHH
T ss_pred EeCHHHcCCCCHHHHHHHHHH
Confidence 667776 467777776664
No 94
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.15 E-value=0.02 Score=49.54 Aligned_cols=160 Identities=17% Similarity=0.244 Sum_probs=108.0
Q ss_pred ceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHh
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMAD 85 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ 85 (277)
..+.|-+-..|..+...-.+.|.+.|++.+-+. |- -..+.+.|+.+++.+|+..+=+.- |.+ .++++...+
T Consensus 13 ~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt-----~~--t~~a~~~I~~l~~~~p~~~IGAGT-Vlt-~~~a~~ai~ 83 (217)
T 3lab_A 13 KPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVT-----LR--TEAGLAAISAIKKAVPEAIVGAGT-VCT-ADDFQKAID 83 (217)
T ss_dssp CSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEE-----TT--STTHHHHHHHHHHHCTTSEEEEEC-CCS-HHHHHHHHH
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEe-----CC--CccHHHHHHHHHHHCCCCeEeecc-ccC-HHHHHHHHH
Confidence 457777777888888888899999999995552 22 124678999999999997776763 334 557888999
Q ss_pred cCCCeEEEeccCCCCCHHHHHHHHhhCC------C--cccc-hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCC
Q psy11600 86 ANVDQYTFHVEPVDNVPQVIRQIKEAGM------K--VGQV-LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGM 156 (277)
Q Consensus 86 ag~d~i~~H~e~~d~g~~~i~~i~~~~~------~--~~d~-p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~ 156 (277)
+|++++-- -...+++++..+++.. . |.-+ |.+-. ...++|+|++-|.
T Consensus 84 AGA~fivs----P~~~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~-~A~~~Gad~vK~F------------------- 139 (217)
T 3lab_A 84 AGAQFIVS----PGLTPELIEKAKQVKLDGQWQGVFLPGVATASEVM-IAAQAGITQLKCF------------------- 139 (217)
T ss_dssp HTCSEEEE----SSCCHHHHHHHHHHHHHCSCCCEEEEEECSHHHHH-HHHHTTCCEEEET-------------------
T ss_pred cCCCEEEe----CCCcHHHHHHHHHcCCCccCCCeEeCCCCCHHHHH-HHHHcCCCEEEEC-------------------
Confidence 99998821 1235778877766533 1 1111 33322 2234455544443
Q ss_pred ccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCC--CchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccC
Q psy11600 157 KVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFG--GQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLT 234 (277)
Q Consensus 157 ~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~--gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gp 234 (277)
|+.. | .+-++.++.-+|++.+..-|||+.+|+.+..++|.
T Consensus 140 -------------------------------Pa~~~gG-------~~~lkal~~p~p~i~~~ptGGI~~~N~~~~l~aGa 181 (217)
T 3lab_A 140 -------------------------------PASAIGG-------AKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLPN 181 (217)
T ss_dssp -------------------------------TTTTTTH-------HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHSTT
T ss_pred -------------------------------ccccccC-------HHHHHHHHhhhcCceEEEeCCCCHHHHHHHHHCCC
Confidence 2210 1 23456667667888999999999999999999988
Q ss_pred CC
Q psy11600 235 GF 236 (277)
Q Consensus 235 g~ 236 (277)
.+
T Consensus 182 ~~ 183 (217)
T 3lab_A 182 VI 183 (217)
T ss_dssp BC
T ss_pred EE
Confidence 75
No 95
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.11 E-value=0.0064 Score=54.49 Aligned_cols=172 Identities=11% Similarity=0.074 Sum_probs=110.4
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCC--CCCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCC--ChH
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPV--DNVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVD--NVP 145 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~--d~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~--~~~ 145 (277)
+|.+..+.+.++||+.+++--|.. .|++..++++|+.+..|+.. +...+.....+|||.|.+-...-. .+.
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~ 159 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAK 159 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHH
Confidence 788899999999999996654542 36899999999998887732 455688889999999988764111 122
Q ss_pred HHHHHHHHhCCccceeeCCCCCHHhHHHHHhh-cCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC-CccEEEeCCC-C
Q psy11600 146 QVIRQIKEAGMKVGLAIKPKTPVDVIAEYIES-ADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGV-G 222 (277)
Q Consensus 146 ~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~-~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV-~ 222 (277)
.+.+..+..|+..=+- .. +.+++...+.. .|+ +.+|+-. ...|-. -++...++.+..| ++-+..-||| +
T Consensus 160 ~l~~~a~~lGl~~lve--vh-~~eEl~~A~~~ga~i---IGinnr~-l~t~~~-dl~~~~~L~~~ip~~~~vIaesGI~t 231 (272)
T 3tsm_A 160 ELEDTAFALGMDALIE--VH-DEAEMERALKLSSRL---LGVNNRN-LRSFEV-NLAVSERLAKMAPSDRLLVGESGIFT 231 (272)
T ss_dssp HHHHHHHHTTCEEEEE--EC-SHHHHHHHTTSCCSE---EEEECBC-TTTCCB-CTHHHHHHHHHSCTTSEEEEESSCCS
T ss_pred HHHHHHHHcCCeEEEE--eC-CHHHHHHHHhcCCCE---EEECCCC-CccCCC-ChHHHHHHHHhCCCCCcEEEECCCCC
Confidence 3444555555332111 12 33444433321 333 3445321 111211 2455556666665 5777889999 8
Q ss_pred cCcHHHHHHccCCC---CCcccc-cCHHHHHHHHHh
Q psy11600 223 PNTIDECAKCLTGF---GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 223 ~~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~ 254 (277)
.+.+..+.++|++. |+..+. ++..+.+++|..
T Consensus 232 ~edv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~~ 267 (272)
T 3tsm_A 232 HEDCLRLEKSGIGTFLIGESLMRQHDVAAATRALLT 267 (272)
T ss_dssp HHHHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHHh
Confidence 88888899998884 676666 478888888765
No 96
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=97.07 E-value=0.0025 Score=57.19 Aligned_cols=166 Identities=15% Similarity=0.194 Sum_probs=98.6
Q ss_pred HHHHhcCCCCeeeeeeeccCcHHhHH---HHHh-cCCCeEEEeccCC---CC----------CHHHHHHHHhhCCCcccc
Q psy11600 56 KCLRNKIPKAFFETHMMVQNPQQWIE---PMAD-ANVDQYTFHVEPV---DN----------VPQVIRQIKEAGMKVGQV 118 (277)
Q Consensus 56 ~~l~~~~~~~~~d~Hlmv~~p~~~i~---~l~~-ag~d~i~~H~e~~---d~----------g~~~i~~i~~~~~~~~d~ 118 (277)
+.+|+..|+.++-+.+...+++++.+ .+.+ +|+|.+.+|+-.. ++ -.++++++|+....|+.+
T Consensus 90 ~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~v 169 (311)
T 1ep3_A 90 PWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYV 169 (311)
T ss_dssp HHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 34565347889999999888877643 3445 8999998887521 11 267888888875544432
Q ss_pred --------hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCC
Q psy11600 119 --------LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGF 190 (277)
Q Consensus 119 --------p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt 190 (277)
+.++++.+.++|+|+|++.-- . .|..+.+.+.- +.+.. ...|+
T Consensus 170 k~~~~~~~~~~~a~~l~~~G~d~i~v~~~-----~------------~g~~i~~~~~~----~~~~~--------~~~g~ 220 (311)
T 1ep3_A 170 KLSPNVTDIVPIAKAVEAAGADGLTMINT-----L------------MGVRFDLKTRQ----PILAN--------ITGGL 220 (311)
T ss_dssp EECSCSSCSHHHHHHHHHTTCSEEEECCC-----E------------EECCBCTTTCS----BSSTT--------SCEEE
T ss_pred EECCChHHHHHHHHHHHHcCCCEEEEeCC-----C------------cccccCcccCC----ccccC--------CCCcc
Confidence 466788888999999888310 0 00000000000 00000 00122
Q ss_pred CCchhhhhhhhhHHHHHhhCCCccEEEeCCC-CcCcHHHHHHccCCC---CCcccc-cCHHHHHHH
Q psy11600 191 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKCLTGF---GGQKFM-QDMMPKVKW 251 (277)
Q Consensus 191 ~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV-~~~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~ 251 (277)
+|....+..++.++++++.. ++.+...||| +.+.+.++.++|++. |+..+. ++..+++++
T Consensus 221 ~g~~~~~~~~~~i~~i~~~~-~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i~~ 285 (311)
T 1ep3_A 221 SGPAIKPVALKLIHQVAQDV-DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKIID 285 (311)
T ss_dssp ESGGGHHHHHHHHHHHHTTC-SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHHHH
T ss_pred cCccchHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHHHH
Confidence 23333333345666666544 6789999999 678888888889885 554433 567777664
No 97
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.04 E-value=0.016 Score=51.68 Aligned_cols=181 Identities=17% Similarity=0.278 Sum_probs=101.4
Q ss_pred ceEeeeccccCcc--cHHHHHHHHHHcCCCEEEEec------cccccccC---------CCC--CHHHHHHHHhcCCCCe
Q psy11600 6 CMIGPSILNSDLS--NLHSESQNLLDSGADYLHLDV------MDGTFVPN---------LTF--GHPVVKCLRNKIPKAF 66 (277)
Q Consensus 6 ~~~~~s~~~~d~~--~l~~~~~~l~~~~~~~~h~Di------mDg~fvp~---------~~~--g~~~v~~l~~~~~~~~ 66 (277)
..+.|=+.+.|+. ...+.++.|.+. +|.+-+++ +||+++-. ++. ..+.++++|+. +++|
T Consensus 16 ~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~-~~~P 93 (271)
T 1ujp_A 16 AALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL-TEKP 93 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CCSC
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCC
Confidence 3467788888875 344566667777 88877764 44444311 111 12568999987 7888
Q ss_pred eeeeeeccCc------HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCC
Q psy11600 67 FETHMMVQNP------QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 67 ~d~Hlmv~~p------~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~ 140 (277)
+-+ |...|| +++++.+.++|+|.+.+ .|... |
T Consensus 94 ii~-m~y~n~v~~~g~~~f~~~~~~aG~dGviv-~Dl~~---------------------------------------e- 131 (271)
T 1ujp_A 94 LFL-MTYLNPVLAWGPERFFGLFKQAGATGVIL-PDLPP---------------------------------------D- 131 (271)
T ss_dssp EEE-ECCHHHHHHHCHHHHHHHHHHHTCCEEEC-TTCCG---------------------------------------G-
T ss_pred EEE-EecCcHHHHhhHHHHHHHHHHcCCCEEEe-cCCCH---------------------------------------H-
Confidence 776 322344 55688888999996633 22211 1
Q ss_pred CCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhh-cCceEEEEecCCCCCch--hhhhhhhhHHHHHhhCCCccEEE
Q psy11600 141 VDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIES-ADLVLIMTVEPGFGGQK--FMQDMMPKVKWLRENYPTLNIEV 217 (277)
Q Consensus 141 ~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~-~d~vl~mav~Pgt~gq~--~~~~~l~kI~~l~~~~~~~~i~v 217 (277)
......+.+++.|...-.-+.|.++.+.+..+... .+++...++ .|+.|.. +-.+..+.++++++.. ++.+.+
T Consensus 132 --e~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~-~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~v 207 (271)
T 1ujp_A 132 --EDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSV-TGVTGMRERLPEEVKDLVRRIKART-ALPVAV 207 (271)
T ss_dssp --GCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC-------------CCHHHHHHHHTTC-CSCEEE
T ss_pred --HHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEec-CcccCCCCCCCccHHHHHHHHHhhc-CCCEEE
Confidence 23344455555443322334455555555555433 344444443 3333322 2234456677777754 678999
Q ss_pred eCCCC-cCcHHHHHHccCCC
Q psy11600 218 DGGVG-PNTIDECAKCLTGF 236 (277)
Q Consensus 218 dGgV~-~~tv~~~~~~gpg~ 236 (277)
-|||+ .+++.++ .+++.
T Consensus 208 GfGI~t~e~a~~~--~~ADg 225 (271)
T 1ujp_A 208 GFGVSGKATAAQA--AVADG 225 (271)
T ss_dssp ESCCCSHHHHHHH--TTSSE
T ss_pred EcCCCCHHHHHHh--cCCCE
Confidence 99998 8888886 67774
No 98
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.02 E-value=0.0062 Score=51.65 Aligned_cols=70 Identities=14% Similarity=0.114 Sum_probs=43.6
Q ss_pred CCCeeeeeeeccCcHH---hHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCC
Q psy11600 63 PKAFFETHMMVQNPQQ---WIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMKVGQV------LQDWIEPMADANVD 132 (277)
Q Consensus 63 ~~~~~d~Hlmv~~p~~---~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d 132 (277)
++.++..-++..++.+ .++.+.+.|++++ |+..++. ..+.++.+++....++-+ -.++++.+.++|||
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i--~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad 82 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAV--EIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQ 82 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHHHHTCCEE--EEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCC
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEE--EEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCC
Confidence 3567777788877665 4667778899999 6665553 234455555433222222 13467888888888
Q ss_pred eE
Q psy11600 133 QY 134 (277)
Q Consensus 133 ~i 134 (277)
.|
T Consensus 83 ~V 84 (212)
T 2v82_A 83 LI 84 (212)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 99
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.96 E-value=0.015 Score=50.66 Aligned_cols=163 Identities=14% Similarity=0.051 Sum_probs=100.8
Q ss_pred cHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCccc-----------c---h-hhhhHHHHhcCCCeEEeecCC
Q psy11600 76 PQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQ-----------V---L-QDWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d-----------~---p-~~~i~~~~~~g~d~it~H~E~ 140 (277)
+.+..+.+.++|+..+.+ ++++.|+++|+.+..|+- + | .+.++.+.++|||.|.+-.-.
T Consensus 38 ~~~~A~a~~~~Ga~~i~~------~~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~ 111 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVRI------EGIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTA 111 (232)
T ss_dssp HHHHHHHHHHTTCSEEEE------ESHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCS
T ss_pred HHHHHHHHHHCCCeEEEE------CCHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccc
Confidence 455678888999999864 468899999999877632 1 2 235788899999999864320
Q ss_pred C---CChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHh-hcCceEEEEecCC-CCCchhhhhhhhhHHHHHhhCCCccE
Q psy11600 141 V---DNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIE-SADLVLIMTVEPG-FGGQKFMQDMMPKVKWLRENYPTLNI 215 (277)
Q Consensus 141 ~---~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~-~~d~vl~mav~Pg-t~gq~~~~~~l~kI~~l~~~~~~~~i 215 (277)
. ..+.++++.+++.|+.....+ . +.+......+ -+|++. .+ +-| |++.+....-++.++++++. ++-+
T Consensus 112 ~~~p~~l~~~i~~~~~~g~~v~~~v--~-t~eea~~a~~~Gad~Ig-~~-~~g~t~~~~~~~~~~~~i~~l~~~--~ipv 184 (232)
T 3igs_A 112 RQRPVAVEALLARIHHHHLLTMADC--S-SVDDGLACQRLGADIIG-TT-MSGYTTPDTPEEPDLPLVKALHDA--GCRV 184 (232)
T ss_dssp SCCSSCHHHHHHHHHHTTCEEEEEC--C-SHHHHHHHHHTTCSEEE-CT-TTTSSSSSCCSSCCHHHHHHHHHT--TCCE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEeC--C-CHHHHHHHHhCCCCEEE-Ec-CccCCCCCCCCCCCHHHHHHHHhc--CCcE
Confidence 0 145677888887765544432 2 3444444332 255442 11 112 11111112234556666654 7888
Q ss_pred EEeCCC-CcCcHHHHHHccCCC---CCcccccCHHHHHHHHH
Q psy11600 216 EVDGGV-GPNTIDECAKCLTGF---GGQKFMQDMMPKVKWLR 253 (277)
Q Consensus 216 ~vdGgV-~~~tv~~~~~~gpg~---ggq~F~~~~~~kI~~l~ 253 (277)
...||| +.+.+..+.++|++. |+..+.+ .+..++++
T Consensus 185 IA~GGI~t~~d~~~~~~~GadgV~VGsal~~p--~~~~~~~~ 224 (232)
T 3igs_A 185 IAEGRYNSPALAAEAIRYGAWAVTVGSAITRL--EHICGWYN 224 (232)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEECHHHHCH--HHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEehHhcCH--HHHHHHHH
Confidence 999999 589999999998885 6555543 34444444
No 100
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=96.95 E-value=0.0042 Score=55.71 Aligned_cols=129 Identities=14% Similarity=0.094 Sum_probs=85.3
Q ss_pred ceEeeeccccCcccHHHHHHHHHH-cCCCEEEEeccccc-------cccCCCCCHHHHHHHHhcCCCCeeeeeee--ccC
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLD-SGADYLHLDVMDGT-------FVPNLTFGHPVVKCLRNKIPKAFFETHMM--VQN 75 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~-~~~~~~h~DimDg~-------fvp~~~~g~~~v~~l~~~~~~~~~d~Hlm--v~~ 75 (277)
..+.+++.+.+...+.+..+.+++ .|+|.+.+.+..-. |..+..+-.++++++|+. .++|+.+.+. +.+
T Consensus 99 ~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~~~~~~ 177 (311)
T 1ep3_A 99 LPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLSPNVTD 177 (311)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEECSCSSC
T ss_pred CcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCChHH
Confidence 347788888888888888888887 89999877664211 111112226788899986 4788877664 346
Q ss_pred cHHhHHHHHhcCCCeEEE---------eccCC-------CC---C-------HHHHHHHHhhCCCcccc------hhhhh
Q psy11600 76 PQQWIEPMADANVDQYTF---------HVEPV-------DN---V-------PQVIRQIKEAGMKVGQV------LQDWI 123 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~---------H~e~~-------d~---g-------~~~i~~i~~~~~~~~d~------p~~~i 123 (277)
+.+.++.+.++|+|++++ |.+.. .+ | ...++++++....|+-. +++..
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~ 257 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVL 257 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH
Confidence 677789999999999987 54321 11 2 26677777766555432 44444
Q ss_pred HHHHhcCCCeEEe
Q psy11600 124 EPMADANVDQYTF 136 (277)
Q Consensus 124 ~~~~~~g~d~it~ 136 (277)
+.+ ++|||.+.+
T Consensus 258 ~~l-~~GAd~V~v 269 (311)
T 1ep3_A 258 EMY-MAGASAVAV 269 (311)
T ss_dssp HHH-HHTCSEEEE
T ss_pred HHH-HcCCCEEEE
Confidence 433 477887766
No 101
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.87 E-value=0.016 Score=50.75 Aligned_cols=175 Identities=17% Similarity=0.283 Sum_probs=107.5
Q ss_pred EeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCC----CC---CHHHHHHHH
Q psy11600 37 LDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPV----DN---VPQVIRQIK 109 (277)
Q Consensus 37 ~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~----d~---g~~~i~~i~ 109 (277)
+|++||.-|.-.. | -.........+|.+.++.|.+.|++++ |+--. .+ -..+|+.+.
T Consensus 8 IDl~~G~vVrlv~-G-------------~~~~~~~~~~dP~~~a~~~~~~gad~l--hvvDld~a~~~~~~~~~~i~~i~ 71 (243)
T 4gj1_A 8 LDLIDGEVVRLVK-G-------------DYEQKKVYKYNPLKKFKEYEKAGAKEL--HLVDLTGAKDPSKRQFALIEKLA 71 (243)
T ss_dssp EEEETTEEEEEEC-S-------------SSCEEEECCCCHHHHHHHHHHHTCCEE--EEEEHHHHHCGGGCCHHHHHHHH
T ss_pred EEEECCeEEEEEc-c-------------CcCCCcEeCCCHHHHHHHHHHCCCCEE--EEEecCcccccchhHHHHHHHHH
Confidence 7999997662211 1 122345567899999999999999999 53211 22 467899998
Q ss_pred hhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCcc-ceeeCC-----------------CC
Q psy11600 110 EAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKV-GLAIKP-----------------KT 166 (277)
Q Consensus 110 ~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~-g~~i~p-----------------~t 166 (277)
+.+..|+.+ -.+-++.+.++||+.|.+-..+.+++.-+.+..+..|-++ -+++.. +.
T Consensus 72 ~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~ 151 (243)
T 4gj1_A 72 KEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDK 151 (243)
T ss_dssp HHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CC
T ss_pred HhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccc
Confidence 888888877 5678888999999999998875555555556667666332 112211 12
Q ss_pred CHHhHHHHHhh--cCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHc
Q psy11600 167 PVDVIAEYIES--ADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKC 232 (277)
Q Consensus 167 ~~~~i~~~i~~--~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~ 232 (277)
.+..+...+.. ++-+++..++-.-..+-+..+++ +.+.+..+++.+..-||+. +.+.+.+.
T Consensus 152 ~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~~l~---~~l~~~~~~ipviasGGv~--~~~Dl~~l 214 (243)
T 4gj1_A 152 KLMEVLDFYSNKGLKHILCTDISKDGTMQGVNVRLY---KLIHEIFPNICIQASGGVA--SLKDLENL 214 (243)
T ss_dssp BHHHHHHHHHTTTCCEEEEEETTC-----CCCHHHH---HHHHHHCTTSEEEEESCCC--SHHHHHHT
T ss_pred hHHHHHHHHhhcCCcEEEeeeecccccccCCCHHHH---HHHHHhcCCCCEEEEcCCC--CHHHHHHH
Confidence 22233333333 45566666665433333444444 4445556677888889985 44444443
No 102
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.81 E-value=0.013 Score=51.81 Aligned_cols=171 Identities=11% Similarity=0.057 Sum_probs=104.2
Q ss_pred cCcHHhHHHHHhcCCCeEEEeccC--CCCCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCC-CChH
Q psy11600 74 QNPQQWIEPMADANVDQYTFHVEP--VDNVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPV-DNVP 145 (277)
Q Consensus 74 ~~p~~~i~~l~~ag~d~i~~H~e~--~d~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~-~~~~ 145 (277)
.+|.+..+.+.++|++++++--|. ..|.+..++++|+.+..|+.. ....+....++|||.|.+-...- ..+.
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~~~l~ 144 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLGELTG 144 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHGGGHH
T ss_pred CCHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchHHHHH
Confidence 467888999999999999553232 235899999999998887543 45467888999999999855300 0333
Q ss_pred HHHHHHHHhCCccceeeCCCCCHHhHHHHHhh-cCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC----CccEEEeCC
Q psy11600 146 QVIRQIKEAGMKVGLAIKPKTPVDVIAEYIES-ADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGG 220 (277)
Q Consensus 146 ~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~-~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~----~~~i~vdGg 220 (277)
++++..+.+|+..-+.+ .+ .+++...+.. .|+ +.+|+-.. ..| ..-++...++.+..+ ++.+..-||
T Consensus 145 ~l~~~a~~lGl~~lvev--~~-~~E~~~a~~~gad~---IGvn~~~l-~~~-~~dl~~~~~L~~~i~~~~~~~~vIAegG 216 (254)
T 1vc4_A 145 AYLEEARRLGLEALVEV--HT-ERELEIALEAGAEV---LGINNRDL-ATL-HINLETAPRLGRLARKRGFGGVLVAESG 216 (254)
T ss_dssp HHHHHHHHHTCEEEEEE--CS-HHHHHHHHHHTCSE---EEEESBCT-TTC-CBCTTHHHHHHHHHHHTTCCSEEEEESC
T ss_pred HHHHHHHHCCCeEEEEE--CC-HHHHHHHHHcCCCE---EEEccccC-cCC-CCCHHHHHHHHHhCccccCCCeEEEEcC
Confidence 44444445554432222 22 2344433332 333 34555211 011 111334444444333 456777999
Q ss_pred CC-cCcHHHHHHccCCC---CCcccc-cCHHHHHHHHH
Q psy11600 221 VG-PNTIDECAKCLTGF---GGQKFM-QDMMPKVKWLR 253 (277)
Q Consensus 221 V~-~~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~ 253 (277)
|+ .+.+..+.+ |++. |+..+. ++..+.+++|.
T Consensus 217 I~s~~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l~ 253 (254)
T 1vc4_A 217 YSRKEELKALEG-LFDAVLIGTSLMRAPDLEAALRELV 253 (254)
T ss_dssp CCSHHHHHTTTT-TCSEEEECHHHHTSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHHh
Confidence 98 899988888 8874 666666 46777777664
No 103
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.79 E-value=0.03 Score=48.70 Aligned_cols=163 Identities=12% Similarity=0.096 Sum_probs=100.3
Q ss_pred cHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCccc-----------c---h-hhhhHHHHhcCCCeEEeecCC
Q psy11600 76 PQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQ-----------V---L-QDWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d-----------~---p-~~~i~~~~~~g~d~it~H~E~ 140 (277)
+.+....+.++|+..+.+ +++..|+++|+.+..|+- + | .+.++.+.++|||.|.+-.-.
T Consensus 38 ~~~~A~a~~~~Ga~~i~~------~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~ 111 (229)
T 3q58_A 38 VAAMAQAAASAGAVAVRI------EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASF 111 (229)
T ss_dssp HHHHHHHHHHTTCSEEEE------ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCS
T ss_pred HHHHHHHHHHCCCcEEEE------CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccc
Confidence 355678888999999864 578899999999877641 2 3 235788899999999864310
Q ss_pred C---CChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHh-hcCceEEEEecCCC-CCchhhhhhhhhHHHHHhhCCCccE
Q psy11600 141 V---DNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIE-SADLVLIMTVEPGF-GGQKFMQDMMPKVKWLRENYPTLNI 215 (277)
Q Consensus 141 ~---~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~-~~d~vl~mav~Pgt-~gq~~~~~~l~kI~~l~~~~~~~~i 215 (277)
. ..+.++++.+++.|+.....+ . +.+......+ -+|++. .+ +-|+ ++......-++.++++++. ++-+
T Consensus 112 ~~~p~~l~~~i~~~~~~g~~v~~~v--~-t~eea~~a~~~Gad~Ig-~~-~~g~t~~~~~~~~~~~li~~l~~~--~ipv 184 (229)
T 3q58_A 112 RSRPVDIDSLLTRIRLHGLLAMADC--S-TVNEGISCHQKGIEFIG-TT-LSGYTGPITPVEPDLAMVTQLSHA--GCRV 184 (229)
T ss_dssp SCCSSCHHHHHHHHHHTTCEEEEEC--S-SHHHHHHHHHTTCSEEE-CT-TTTSSSSCCCSSCCHHHHHHHHTT--TCCE
T ss_pred cCChHHHHHHHHHHHHCCCEEEEec--C-CHHHHHHHHhCCCCEEE-ec-CccCCCCCcCCCCCHHHHHHHHHc--CCCE
Confidence 0 156678888887765544432 2 3444443332 245441 11 1222 1111112234556666654 7889
Q ss_pred EEeCCC-CcCcHHHHHHccCCC---CCcccccCHHHHHHHHH
Q psy11600 216 EVDGGV-GPNTIDECAKCLTGF---GGQKFMQDMMPKVKWLR 253 (277)
Q Consensus 216 ~vdGgV-~~~tv~~~~~~gpg~---ggq~F~~~~~~kI~~l~ 253 (277)
...||| +.+.+..+.++|++. |+..+.+ ....+++.
T Consensus 185 IA~GGI~t~~d~~~~~~~GadgV~VGsai~~p--~~~~~~f~ 224 (229)
T 3q58_A 185 IAEGRYNTPALAANAIEHGAWAVTVGSAITRI--EHICQWFS 224 (229)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEECHHHHCH--HHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEchHhcCh--HHHHHHHH
Confidence 999999 589999999998885 6555543 33344444
No 104
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=96.75 E-value=0.021 Score=50.58 Aligned_cols=170 Identities=14% Similarity=0.213 Sum_probs=111.4
Q ss_pred CCeeeeeeeccCcHH-----hHHHHHhcCCCeEEEec---cC-CCC-------------C---HHHHHHHHhhCC-Ccc-
Q psy11600 64 KAFFETHMMVQNPQQ-----WIEPMADANVDQYTFHV---EP-VDN-------------V---PQVIRQIKEAGM-KVG- 116 (277)
Q Consensus 64 ~~~~d~Hlmv~~p~~-----~i~~l~~ag~d~i~~H~---e~-~d~-------------g---~~~i~~i~~~~~-~~~- 116 (277)
+.-+-.+++..+|.. .++.+.++|+|.+-+=+ |+ .|| | .++++.+++... .|+
T Consensus 13 ~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Piv 92 (252)
T 3tha_A 13 ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALV 92 (252)
T ss_dssp SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEE
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEE
Confidence 456889999999854 26667789999985542 33 244 1 344444544432 233
Q ss_pred cc----------hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhc-CceEEEE
Q psy11600 117 QV----------LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESA-DLVLIMT 185 (277)
Q Consensus 117 d~----------p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~-d~vl~ma 185 (277)
.| .++|++..+++|+|.+.+.==|-+......+..++.|...=.-+.|.|+.+.+....+.. +++-.++
T Consensus 93 lm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs 172 (252)
T 3tha_A 93 FMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLA 172 (252)
T ss_dssp EECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEEC
T ss_pred EEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEe
Confidence 22 688999999999998876421111345677788888877666678888888888887776 5655544
Q ss_pred ecCCCCCch--hhhhhhhhHHHHHhhCCCccEEEeCCC-CcCcHHHHHHccCCC
Q psy11600 186 VEPGFGGQK--FMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKCLTGF 236 (277)
Q Consensus 186 v~Pgt~gq~--~~~~~l~kI~~l~~~~~~~~i~vdGgV-~~~tv~~~~~~gpg~ 236 (277)
..|+.|.. +-+.+.+.++++++.. +.-+.+-+|| +.+++..+.+ +++.
T Consensus 173 -~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~a~~~~~-~ADG 223 (252)
T 3tha_A 173 -SIGITGTKSVEEAILQDKVKEIRSFT-NLPIFVGFGIQNNQDVKRMRK-VADG 223 (252)
T ss_dssp -CSCSSSCSHHHHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHTT-TSSE
T ss_pred -cCCCCCcccCCCHHHHHHHHHHHHhc-CCcEEEEcCcCCHHHHHHHHh-cCCE
Confidence 34544443 3345566677777763 5788899999 6666666554 3553
No 105
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=96.67 E-value=0.013 Score=53.42 Aligned_cols=43 Identities=12% Similarity=0.203 Sum_probs=34.0
Q ss_pred HHHHHHHhcCCCCeeeeeeeccCcH--HhHHHHHhcCCCeEEEecc
Q psy11600 53 PVVKCLRNKIPKAFFETHMMVQNPQ--QWIEPMADANVDQYTFHVE 96 (277)
Q Consensus 53 ~~v~~l~~~~~~~~~d~Hlmv~~p~--~~i~~l~~ag~d~i~~H~e 96 (277)
+.++.+|+. ++.|+-+.+++.+|. +.++.+.++|+|.+.+|..
T Consensus 53 ~~i~~i~~~-~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g 97 (332)
T 2z6i_A 53 ANIDKIKSL-TDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAG 97 (332)
T ss_dssp HHHHHHHHH-CCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHh-cCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCC
Confidence 446677765 778999999996654 5688888999999988864
No 106
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.63 E-value=0.058 Score=49.55 Aligned_cols=173 Identities=13% Similarity=0.092 Sum_probs=99.0
Q ss_pred cccHHHHHHHHHHcCCCEEEEecc--cccc------ccCCCCCHHHHHHHHhcCCCCeeeeee-eccCcHHhHHHHHhcC
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVM--DGTF------VPNLTFGHPVVKCLRNKIPKAFFETHM-MVQNPQQWIEPMADAN 87 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~Dim--Dg~f------vp~~~~g~~~v~~l~~~~~~~~~d~Hl-mv~~p~~~i~~l~~ag 87 (277)
....-+-++.|.+.|+|+ +.+- ||-+ .|...=..+.++.+++..++.++.+-. -.....+.++...++|
T Consensus 29 ~e~k~~i~~~L~~~Gvd~--IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aG 106 (345)
T 1nvm_A 29 LDDVRAIARALDKAKVDS--IEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAG 106 (345)
T ss_dssp HHHHHHHHHHHHHHTCSE--EECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCE--EEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCC
Confidence 334445566788888888 5542 2222 122222346788888877777776532 1222367899999999
Q ss_pred CCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceee--CCC
Q psy11600 88 VDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAI--KPK 165 (277)
Q Consensus 88 ~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i--~p~ 165 (277)
++.+++..-..+. | .....++..++.|+.....+ -+.
T Consensus 107 vd~v~I~~~~s~~--------------------------------------~---~~~~~i~~ak~~G~~v~~~~~~a~~ 145 (345)
T 1nvm_A 107 ARVVRVATHCTEA--------------------------------------D---VSKQHIEYARNLGMDTVGFLMMSHM 145 (345)
T ss_dssp CCEEEEEEETTCG--------------------------------------G---GGHHHHHHHHHHTCEEEEEEESTTS
T ss_pred cCEEEEEEeccHH--------------------------------------H---HHHHHHHHHHHCCCEEEEEEEeCCC
Confidence 9998665322220 1 22334444555555444444 444
Q ss_pred CCHHhHHHHHhh-----cCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC-CccEEE----eCCCCcCcHHHHHHccCC
Q psy11600 166 TPVDVIAEYIES-----ADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP-TLNIEV----DGGVGPNTIDECAKCLTG 235 (277)
Q Consensus 166 t~~~~i~~~i~~-----~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~-~~~i~v----dGgV~~~tv~~~~~~gpg 235 (277)
++.+.+.+.++. ++. ++ -++|.|...-.++.+.++.+++..+ ++.+.+ |-|.-+.|.....++|++
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~---i~-l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~ 221 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATC---IY-MADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCD 221 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSE---EE-EECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCE---EE-ECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCC
Confidence 555544444332 232 22 3566665555566677888888775 677776 556666777777777766
Q ss_pred C
Q psy11600 236 F 236 (277)
Q Consensus 236 ~ 236 (277)
.
T Consensus 222 ~ 222 (345)
T 1nvm_A 222 R 222 (345)
T ss_dssp E
T ss_pred E
Confidence 4
No 107
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=96.47 E-value=0.0085 Score=52.15 Aligned_cols=73 Identities=10% Similarity=0.022 Sum_probs=53.3
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEecc
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVE 96 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e 96 (277)
++.+..+.+++.|++++|+-=.|+.+.. -....+.++++++. .++|+-+-=-+.++++ ++.+.++|+|.+ |+-
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~-~~~~~~~i~~i~~~-~~ipvi~~Ggi~~~~~-~~~~l~~Gad~V--~ig 108 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYDTEMIRFVRPL-TTLPIIASGGAGKMEH-FLEAFLRGADKV--SIN 108 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCS-SCCCHHHHHHHGGG-CCSCEEEESCCCSHHH-HHHHHHTTCSEE--CCS
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCC-CcccHHHHHHHHHh-CCCCEEEeCCCCCHHH-HHHHHHcCCCee--ehh
Confidence 5667888899999999997444433321 13456899999986 6888887766777765 666778899999 544
No 108
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.46 E-value=0.053 Score=50.34 Aligned_cols=103 Identities=12% Similarity=0.078 Sum_probs=69.7
Q ss_pred HHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC----C
Q psy11600 26 NLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN----V 101 (277)
Q Consensus 26 ~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~----g 101 (277)
..++.|+..+|- .+.++ --.+.++++|+. +++++-+.+.+.. .+.++.+.++|+|.++ ++...+ -
T Consensus 65 vA~~GGlgii~~-----~~s~e--~~~~~I~~vk~~-~~~pvga~ig~~~-~e~a~~l~eaGad~I~--ld~a~G~~~~~ 133 (361)
T 3khj_A 65 MARLGGIGIIHK-----NMDME--SQVNEVLKVKNS-GGLRVGAAIGVNE-IERAKLLVEAGVDVIV--LDSAHGHSLNI 133 (361)
T ss_dssp HHHTTCEEEECS-----SSCHH--HHHHHHHHHHHT-TCCCCEEEECTTC-HHHHHHHHHTTCSEEE--ECCSCCSBHHH
T ss_pred HHHcCCCeEEec-----CCCHH--HHHHHHHHHHhc-cCceEEEEeCCCH-HHHHHHHHHcCcCeEE--EeCCCCCcHHH
Confidence 455678888872 22221 112467777764 8899999998866 7889999999999994 444333 2
Q ss_pred HHHHHHHHhhCCCccc---c-hhhhhHHHHhcCCCeEEeecC
Q psy11600 102 PQVIRQIKEAGMKVGQ---V-LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 102 ~~~i~~i~~~~~~~~d---~-p~~~i~~~~~~g~d~it~H~E 139 (277)
.+.++++|+....++- + -.+.+..+.++|||.|.+..+
T Consensus 134 ~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~ 175 (361)
T 3khj_A 134 IRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIG 175 (361)
T ss_dssp HHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecC
Confidence 3567777776543332 2 355678888999999988655
No 109
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=96.43 E-value=0.055 Score=50.01 Aligned_cols=108 Identities=17% Similarity=0.214 Sum_probs=70.4
Q ss_pred hhhhHHHHhcCCCeEEeecCCCCCh-HHHHHHHHHhCCccceeeCCCCCHHhHHHHH-hhcCceEEEEecCCCCCc--hh
Q psy11600 120 QDWIEPMADANVDQYTFHVEPVDNV-PQVIRQIKEAGMKVGLAIKPKTPVDVIAEYI-ESADLVLIMTVEPGFGGQ--KF 195 (277)
Q Consensus 120 ~~~i~~~~~~g~d~it~H~E~~~~~-~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i-~~~d~vl~mav~Pgt~gq--~~ 195 (277)
.++++.+.++|++.|++|.+ .+ ...++.+++.|++.+..+ . +.+...... ..+|.+.+ ..|+++|+ .+
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g---~~~~~~i~~~~~~g~~v~~~v--~-t~~~a~~a~~~GaD~i~v--~g~~~GGh~g~~ 183 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFG---VPDREVIARLRRAGTLTLVTA--T-TPEEARAVEAAGADAVIA--QGVEAGGHQGTH 183 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESS---CCCHHHHHHHHHTTCEEEEEE--S-SHHHHHHHHHTTCSEEEE--ECTTCSEECCCS
T ss_pred HHHHHHHHhcCCCEEEEeCC---CCcHHHHHHHHHCCCeEEEEC--C-CHHHHHHHHHcCCCEEEE--eCCCcCCcCCCc
Confidence 56788889999999999987 53 467788888776655544 3 344333332 23676654 24543322 11
Q ss_pred hh---------hhhhhHHHHHhhCCCccEEEeCCC-CcCcHHHHHHccCCC
Q psy11600 196 MQ---------DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKCLTGF 236 (277)
Q Consensus 196 ~~---------~~l~kI~~l~~~~~~~~i~vdGgV-~~~tv~~~~~~gpg~ 236 (277)
.+ ..++.+.++++.. ++.+.++||| +..++..+.+.|+++
T Consensus 184 ~~~~~~~~~~~~~~~~l~~i~~~~-~iPViaaGGI~~~~~~~~~l~~GAd~ 233 (369)
T 3bw2_A 184 RDSSEDDGAGIGLLSLLAQVREAV-DIPVVAAGGIMRGGQIAAVLAAGADA 233 (369)
T ss_dssp SCCGGGTTCCCCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSE
T ss_pred ccccccccccccHHHHHHHHHHhc-CceEEEECCCCCHHHHHHHHHcCCCE
Confidence 11 1244555555433 6779999999 899999999999885
No 110
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=96.40 E-value=0.17 Score=45.74 Aligned_cols=210 Identities=11% Similarity=0.058 Sum_probs=113.3
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEecc-----ccccccC--CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVM-----DGTFVPN--LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADAN 87 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~Dim-----Dg~fvp~--~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag 87 (277)
.|+.+. +..+..++.|++. +-+. |-.|-.. ..-.++.|+++|+. .++|+.+-..+.. .+.++.+.++|
T Consensus 26 ~d~~~~-e~A~~ye~~GA~~--lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~-v~iPvl~k~~i~~-ide~qil~aaG 100 (297)
T 4adt_A 26 MDVKNV-EQAKIAEKAGAIG--VMILENIPSELRNTDGVARSVDPLKIEEIRKC-ISINVLAKVRIGH-FVEAQILEELK 100 (297)
T ss_dssp EEESSH-HHHHHHHHHTCSE--EEECCCCC-----CCCCCCCCCHHHHHHHHTT-CCSEEEEEEETTC-HHHHHHHHHTT
T ss_pred cCCCcH-HHHHHHHHcCCCE--EEEecCCCCcchhcCCcccCCCHHHHHHHHHh-cCCCEEEeccCCc-HHHHHHHHHcC
Confidence 355555 4568889999999 7777 4344322 11258999999986 7899987666655 56677888999
Q ss_pred CCeEEEeccCCCCCHHHHHHHHhhC-CCcc--cc-hhhhhHHHHhcCCCeEEeecCCCC-ChHHHHHHHHHhCCccceee
Q psy11600 88 VDQYTFHVEPVDNVPQVIRQIKEAG-MKVG--QV-LQDWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGLAI 162 (277)
Q Consensus 88 ~d~i~~H~e~~d~g~~~i~~i~~~~-~~~~--d~-p~~~i~~~~~~g~d~it~H~E~~~-~~~~~~~~I~~~g~~~g~~i 162 (277)
+|.+ -..+... -+++++.++++. ..++ ++ -..-.....++|++.|..|-.+.+ +..+..++.+...
T Consensus 101 AD~I-d~s~~~~-~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~------- 171 (297)
T 4adt_A 101 VDML-DESEVLT-MADEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVN------- 171 (297)
T ss_dssp CSEE-EEETTSC-CSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHH-------
T ss_pred CCEE-EcCCCCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhh-------
Confidence 9998 2222111 122344444421 1222 22 111233445678888888754111 1123333333210
Q ss_pred CCCCCHHhHHHHHhhcCceEEEEecCCCCCchh---hhhhhhhHHHHHhhCC-CccEEEeCCC-CcCcHHHHHHccCCC-
Q psy11600 163 KPKTPVDVIAEYIESADLVLIMTVEPGFGGQKF---MQDMMPKVKWLRENYP-TLNIEVDGGV-GPNTIDECAKCLTGF- 236 (277)
Q Consensus 163 ~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~---~~~~l~kI~~l~~~~~-~~~i~vdGgV-~~~tv~~~~~~gpg~- 236 (277)
.++. .+... ++.. ...| ...-++.++++++..+ .+.+...||| +..++..+.++|++.
T Consensus 172 ------~eir-~l~~~--------~~d~-L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAdgV 235 (297)
T 4adt_A 172 ------NEIK-YLCSL--------DESE-VYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMDGV 235 (297)
T ss_dssp ------HHHH-HHHHS--------CTTT-HHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCSCE
T ss_pred ------hhhh-hhccc--------cccc-cccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCCEE
Confidence 0000 00000 0000 0000 0112344555555432 2334579999 999999999999985
Q ss_pred --CCcccc-cCHHHHHHHHHh
Q psy11600 237 --GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 237 --ggq~F~-~~~~~kI~~l~~ 254 (277)
|+..|. ++..+.++++++
T Consensus 236 lVGsai~~a~dp~~~~~~l~~ 256 (297)
T 4adt_A 236 FVGSGIFESENPQKMASSIVM 256 (297)
T ss_dssp EESHHHHTSSCHHHHHHHHHH
T ss_pred EEhHHHHcCCCHHHHHHHHHH
Confidence 766665 466677777764
No 111
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=96.37 E-value=0.03 Score=50.39 Aligned_cols=171 Identities=13% Similarity=0.057 Sum_probs=102.0
Q ss_pred HHHHHh--cCCCCeeeeeeeccCcHHh---HHHHHhcCCC---eEEEeccCC--CC----------CHHHHHHHHhhCCC
Q psy11600 55 VKCLRN--KIPKAFFETHMMVQNPQQW---IEPMADANVD---QYTFHVEPV--DN----------VPQVIRQIKEAGMK 114 (277)
Q Consensus 55 v~~l~~--~~~~~~~d~Hlmv~~p~~~---i~~l~~ag~d---~i~~H~e~~--d~----------g~~~i~~i~~~~~~ 114 (277)
++.+++ .+++.|+-+-+.-.+++++ ++.+.++|+| .+.+|+-.- .+ -.++++++|+....
T Consensus 82 ~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~ 161 (314)
T 2e6f_A 82 LKYASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGL 161 (314)
T ss_dssp HHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCC
Confidence 455554 3367899998887777776 4456677899 998886421 11 24588899887655
Q ss_pred cccc----------hhhhhHHHHhcC-CCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEE
Q psy11600 115 VGQV----------LQDWIEPMADAN-VDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLI 183 (277)
Q Consensus 115 ~~d~----------p~~~i~~~~~~g-~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~ 183 (277)
|+-+ ..++++.+.++| +|.|++|-- +. .+..+.+.+.- +.+.....
T Consensus 162 Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~----~~------------~~~~i~~~~~~----~~~~~~~~--- 218 (314)
T 2e6f_A 162 PFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNS----VG------------NGLVIDAESES----VVIKPKQG--- 218 (314)
T ss_dssp CEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCC----EE------------EEECEETTTTE----ESCCGGGG---
T ss_pred CEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCC----CC------------ccccccCCCCC----cccccCcC---
Confidence 5533 223467778999 999998742 10 00111100000 00000000
Q ss_pred EEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCC-cCcHHHHHHccCCC---CCccc--ccCHHHHHHH
Q psy11600 184 MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKCLTGF---GGQKF--MQDMMPKVKW 251 (277)
Q Consensus 184 mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~-~~tv~~~~~~gpg~---ggq~F--~~~~~~kI~~ 251 (277)
..|.+|....+..++.++++++..+++.+...|||+ .+.+.++..+|++. |...+ .|...+++++
T Consensus 219 ---~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~ 289 (314)
T 2e6f_A 219 ---FGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLED 289 (314)
T ss_dssp ---EEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHH
T ss_pred ---CCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHH
Confidence 012233333344566777777766789999999996 67788888889886 44444 3567777764
No 112
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.26 E-value=0.041 Score=47.66 Aligned_cols=185 Identities=12% Similarity=0.094 Sum_probs=101.8
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCC-eeeeeeeccCcHHhHHHHHhc
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKA-FFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~-~~d~Hlmv~~p~~~i~~l~~a 86 (277)
+=++++|.. +.++.+++. .++ +++.. ..|. ..+|++.++.|++. .++ ++-.+++..|..+.+....++
T Consensus 5 ~livALD~~---~al~l~~~l-~~~--v~~~KvG~~l~--~~~G~~~v~~L~~~-~~~~~VflDlK~~DI~nTv~~~~~~ 75 (222)
T 4dbe_A 5 RVILAMDKP---LSYQVLKEM-ENE--LYGIKVGLPLV--LDLGVDKTRELLIG-LDVEEIIVDFKLADIGYIMKSIVER 75 (222)
T ss_dssp CEEEEESSC---CCHHHHHHH-GGG--CSEEEEEHHHH--HHHCHHHHHHHHHT-CCCSEEEEEEEECSCHHHHHHHHTT
T ss_pred CeEEECCHH---HHHHHHHHh-CCc--CcEEEECHHHH--HhhCHHHHHHHHHh-cCCCeEEEEeeecchHHHHHHHHHH
Confidence 346778877 444444443 232 44444 2333 35899999999984 388 899999999999887766544
Q ss_pred CC--CeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcC--CCeEEeecCCCC---ChHHHHHHHHHhCCccc
Q psy11600 87 NV--DQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADAN--VDQYTFHVEPVD---NVPQVIRQIKEAGMKVG 159 (277)
Q Consensus 87 g~--d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g--~d~it~H~E~~~---~~~~~~~~I~~~g~~~g 159 (277)
-+ |++|+|.-.. ....++..++. ..+.| +-.+|---+++- ...+..+..++.|..
T Consensus 76 ~~~~d~vTVh~~~G--~~~~~~~a~~~--------------~~~~~~~v~vLts~s~~~~~~~~~~~~a~~a~~~g~~-- 137 (222)
T 4dbe_A 76 LSFANSFIAHSFIG--VKGSLDELKRY--------------LDANSKNLYLVAVMSHEGWSTLFADYIKNVIREISPK-- 137 (222)
T ss_dssp CTTCSEEEEESTTC--TTTTHHHHHHH--------------HHHTTCEEEEEEECSSTTCCCTTHHHHHHHHHHHCCS--
T ss_pred HHhCCEEEEEcCcC--cHHHHHHHHHH--------------HHhcCCcEEEEEeCCCcchHHHHHHHHHHHHHHhCCC--
Confidence 33 8999996432 03334433221 11111 101111000000 012333333443311
Q ss_pred eeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcC--cHHHHHHccCCC-
Q psy11600 160 LAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPN--TIDECAKCLTGF- 236 (277)
Q Consensus 160 ~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~--tv~~~~~~gpg~- 236 (277)
++ |.++|.. +.++.+++..++ -+.|-+||... |..+..++|+++
T Consensus 138 -----------------------Gv-V~sat~p--------~e~~~ir~~~~~-~~~vtPGI~~~g~tp~~a~~~Gad~i 184 (222)
T 4dbe_A 138 -----------------------GI-VVGGTKL--------DHITQYRRDFEK-MTIVSPGMGSQGGSYGDAVCAGADYE 184 (222)
T ss_dssp -----------------------EE-EECTTCH--------HHHHHHHHHCTT-CEEEECCBSTTSBCTTHHHHHTCSEE
T ss_pred -----------------------EE-EECCCCH--------HHHHHHHHhCCC-CEEEcCCcccCccCHHHHHHcCCCEE
Confidence 11 2233321 236666776777 56678999887 777888899997
Q ss_pred --CCcccc-cCHHHHHHHHHh
Q psy11600 237 --GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 237 --ggq~F~-~~~~~kI~~l~~ 254 (277)
|...+. ++..+..+++++
T Consensus 185 VVGR~I~~A~dP~~aa~~i~~ 205 (222)
T 4dbe_A 185 IIGRSIYNAGNPLTALRTINK 205 (222)
T ss_dssp EECHHHHTSSSHHHHHHHHHH
T ss_pred EECHHhcCCCCHHHHHHHHHH
Confidence 666665 456655555543
No 113
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=96.23 E-value=0.25 Score=43.87 Aligned_cols=169 Identities=15% Similarity=0.206 Sum_probs=96.0
Q ss_pred HHHHHhcCCCCeeeeeeeccCcHH-----hHHHHHhcCCCeEEEecc---C-CCC-------------------CHHHHH
Q psy11600 55 VKCLRNKIPKAFFETHMMVQNPQQ-----WIEPMADANVDQYTFHVE---P-VDN-------------------VPQVIR 106 (277)
Q Consensus 55 v~~l~~~~~~~~~d~Hlmv~~p~~-----~i~~l~~ag~d~i~~H~e---~-~d~-------------------g~~~i~ 106 (277)
.+++|+. -+.-+-.|++..+|.. .++.+.++ +|.|-+-.- . .|| ....++
T Consensus 7 f~~~~~~-~~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~ 84 (271)
T 1ujp_A 7 FAKARSE-GRAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVR 84 (271)
T ss_dssp HHHHHHT-TBCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHc-CCceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 3455543 3456888999998864 36667777 998855432 1 122 135577
Q ss_pred HHHhhCCCcccc-----------hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHH---hHH
Q psy11600 107 QIKEAGMKVGQV-----------LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVD---VIA 172 (277)
Q Consensus 107 ~i~~~~~~~~d~-----------p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~---~i~ 172 (277)
++|+....|+-. .+++++.++++|+|.+.+- ..+.+ .+.
T Consensus 85 ~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~---------------------------Dl~~ee~~~~~ 137 (271)
T 1ujp_A 85 EVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILP---------------------------DLPPDEDPGLV 137 (271)
T ss_dssp HHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECT---------------------------TCCGGGCHHHH
T ss_pred HHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEec---------------------------CCCHHHHHHHH
Confidence 787775444311 2566677777777765552 22222 233
Q ss_pred HHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCC--cccccCHHHHHH
Q psy11600 173 EYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGG--QKFMQDMMPKVK 250 (277)
Q Consensus 173 ~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~gg--q~F~~~~~~kI~ 250 (277)
+.++..++-++.-+.|.++ .++++.+......+.+.+ +. .|..| +.+.++..+.++
T Consensus 138 ~~~~~~gl~~i~liap~s~--------~eri~~ia~~~~gfiy~v--s~------------~G~TG~~~~~~~~~~~~v~ 195 (271)
T 1ujp_A 138 RLAQEIGLETVFLLAPTST--------DARIATVVRHATGFVYAV--SV------------TGVTGMRERLPEEVKDLVR 195 (271)
T ss_dssp HHHHHHTCEEECEECTTCC--------HHHHHHHHTTCCSCEEEE--CC------------------------CCHHHHH
T ss_pred HHHHHcCCceEEEeCCCCC--------HHHHHHHHHhCCCCEEEE--ec------------CcccCCCCCCCccHHHHHH
Confidence 4455555544444567654 346777766666665543 11 22211 233445567788
Q ss_pred HHHhhCCCCeEEEeCCCC-ccCHHHh
Q psy11600 251 WLRENYPTLNIEVDGGVG-PNTIDEC 275 (277)
Q Consensus 251 ~l~~~~~~~~I~VDGGI~-~~~~~~~ 275 (277)
++|+.. +..+.|=|||+ +++++++
T Consensus 196 ~vr~~~-~~Pv~vGfGI~t~e~a~~~ 220 (271)
T 1ujp_A 196 RIKART-ALPVAVGFGVSGKATAAQA 220 (271)
T ss_dssp HHHTTC-CSCEEEESCCCSHHHHHHH
T ss_pred HHHhhc-CCCEEEEcCCCCHHHHHHh
Confidence 888764 56799999998 8888764
No 114
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=96.18 E-value=0.019 Score=49.36 Aligned_cols=60 Identities=8% Similarity=0.188 Sum_probs=42.7
Q ss_pred HHhHHHHHhcCCCeEEEeccC-CCCCHHHHHHHHhhCCC-cc-----cc---hhhhhHHHHhcCCCeEEeecC
Q psy11600 77 QQWIEPMADANVDQYTFHVEP-VDNVPQVIRQIKEAGMK-VG-----QV---LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 77 ~~~i~~l~~ag~d~i~~H~e~-~d~g~~~i~~i~~~~~~-~~-----d~---p~~~i~~~~~~g~d~it~H~E 139 (277)
.+.++++... .++=++.+. . +|+..++++|+.... +. |+ +..|++.+.++|||.+|+|.+
T Consensus 25 ~~i~~~~~~~--~~~Kvg~~l~~-~G~~~v~~l~~~~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~ 94 (213)
T 1vqt_A 25 IRFIDENGSF--EVVKVGHNLAI-HGKKIFDELAKRNLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSC 94 (213)
T ss_dssp HHHHHHHCCC--SEEEECHHHHT-TCTHHHHHHHTTTCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGG
T ss_pred HHHHHHhCCC--CEEEECHHHHh-hCHHHHHHHHHCCCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEecc
Confidence 3345554332 556666654 4 788999999987432 33 44 577999999999999999998
No 115
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.05 E-value=0.066 Score=45.77 Aligned_cols=167 Identities=13% Similarity=0.125 Sum_probs=96.0
Q ss_pred HhHHHHHhcCCCeEEEeccCC-CC--CHHHHHHHHhhCCC---cc----cc-hhhhhHHHHhcCCCeEEeecCCCCChHH
Q psy11600 78 QWIEPMADANVDQYTFHVEPV-DN--VPQVIRQIKEAGMK---VG----QV-LQDWIEPMADANVDQYTFHVEPVDNVPQ 146 (277)
Q Consensus 78 ~~i~~l~~ag~d~i~~H~e~~-d~--g~~~i~~i~~~~~~---~~----d~-p~~~i~~~~~~g~d~it~H~E~~~~~~~ 146 (277)
+.++...++|+|++-|=+... .- .+...++|.+.-.. .+ +. ++...+...+++.|.|=+|=+ ....
T Consensus 13 eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~---e~~~ 89 (205)
T 1nsj_A 13 EDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHGE---EPIE 89 (205)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSEEEECSC---CCHH
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCC---CCHH
Confidence 357778899999998775321 11 56666777554221 11 11 566667778889999999974 3334
Q ss_pred HHHHHHH-hCCccceeeCCCCCHHhHHHHHhhcCceEEEEecC--CCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCc
Q psy11600 147 VIRQIKE-AGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEP--GFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP 223 (277)
Q Consensus 147 ~~~~I~~-~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~P--gt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~ 223 (277)
..+.++. ....+.+.+.....++....|- +|.+++=+-.| |..|+.|.-+.+..+. .....+.+.||++.
T Consensus 90 ~~~~l~~~~~vika~~v~~~~~l~~~~~~~--~d~~LlD~~~~~~GGtG~~fdw~~l~~~~-----~~~~p~~LAGGL~p 162 (205)
T 1nsj_A 90 LCRKIAERILVIKAVGVSNERDMERALNYR--EFPILLDTKTPEYGGSGKTFDWSLILPYR-----DRFRYLVLSGGLNP 162 (205)
T ss_dssp HHHHHHTTSEEEEEEEESSHHHHHHHGGGT--TSCEEEEESCSSSSSCCSCCCGGGTGGGG-----GGSSCEEEESSCCT
T ss_pred HHHHHhcCCCEEEEEEcCCHHHHHHHHHcC--CCEEEECCCCCCCCCCCCccCHHHHHhhh-----cCCCcEEEECCCCH
Confidence 4444431 1222344444332332222221 78888776554 5667788766665421 12346889999999
Q ss_pred CcHHHHHH-ccCCC---CCcccc-c--CHHHHHHHHHh
Q psy11600 224 NTIDECAK-CLTGF---GGQKFM-Q--DMMPKVKWLRE 254 (277)
Q Consensus 224 ~tv~~~~~-~gpg~---ggq~F~-~--~~~~kI~~l~~ 254 (277)
+|+.+..+ .+|.. +|..=. + --.+||+++-+
T Consensus 163 eNV~~ai~~~~p~gVDvsSGvE~~pG~KD~~ki~~fi~ 200 (205)
T 1nsj_A 163 ENVRSAIDVVRPFAVDVSSGVEAFPGKKDHDSIKMFIK 200 (205)
T ss_dssp TTHHHHHHHHCCSEEEESGGGEEETTEECHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCceecCCCCcCHHHHHHHHH
Confidence 99977644 46642 332211 1 23567766543
No 116
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.77 E-value=0.17 Score=43.21 Aligned_cols=165 Identities=15% Similarity=0.124 Sum_probs=95.2
Q ss_pred HhHHHHHhcCCCeEEEeccCC-CC--CHHHHHHHHhhCCC---cc----cc-hhhhhHHHHhcCCCeEEeecCCCCChHH
Q psy11600 78 QWIEPMADANVDQYTFHVEPV-DN--VPQVIRQIKEAGMK---VG----QV-LQDWIEPMADANVDQYTFHVEPVDNVPQ 146 (277)
Q Consensus 78 ~~i~~l~~ag~d~i~~H~e~~-d~--g~~~i~~i~~~~~~---~~----d~-p~~~i~~~~~~g~d~it~H~E~~~~~~~ 146 (277)
+.++...++|+|++-|=+... .- .+...++|.+.-.. .+ +. ++...+....++.|.|=+|=+ ....
T Consensus 12 eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~---e~~~ 88 (203)
T 1v5x_A 12 EDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHGE---EPPE 88 (203)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECSC---CCHH
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCC---CCHH
Confidence 346778899999998775321 11 56666776554221 11 11 566677778899999999964 3333
Q ss_pred HHHHHHH-hCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCc
Q psy11600 147 VIRQIKE-AGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNT 225 (277)
Q Consensus 147 ~~~~I~~-~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~t 225 (277)
..+.++. ....+.+.+.....+ ....|- +|.+++=+-. |..|+.|.-+.+..+ +. ....+.+.||++.+|
T Consensus 89 ~~~~l~~~~~vika~~v~~~~~l-~~~~~~--~d~~LlD~~~-gGtG~~fdW~~l~~~--~~---~~~p~~LAGGL~peN 159 (203)
T 1v5x_A 89 WAEAVGRFYPVIKAFPLEGPARP-EWADYP--AQALLLDGKR-PGSGEAYPRAWAKPL--LA---TGRRVILAGGIAPEN 159 (203)
T ss_dssp HHHHHTTTSCEEEEEECSSSCCG-GGGGSS--CSEEEEECSS-TTSCCCCCGGGGHHH--HH---TTSCEEECSSCCSTT
T ss_pred HHHHhccCCCEEEEEEcCChHhh-hhhhcC--CCEEEEcCCC-CCCCCccCHHHHHhh--hc---cCCcEEEECCCCHHH
Confidence 3444432 222344455444444 222222 6887755533 445778876666542 11 234588999999999
Q ss_pred HHHHHHccCCC---CCcccc-c--CHHHHHHHHHh
Q psy11600 226 IDECAKCLTGF---GGQKFM-Q--DMMPKVKWLRE 254 (277)
Q Consensus 226 v~~~~~~gpg~---ggq~F~-~--~~~~kI~~l~~ 254 (277)
+.+..+.+|.. +|..=. + --.+||+++-+
T Consensus 160 V~~ai~~~p~gVDvsSGvE~~pG~KD~~ki~~fi~ 194 (203)
T 1v5x_A 160 LEEVLALRPYALDLASGVEEAPGVKSAEKLRALFA 194 (203)
T ss_dssp HHHHHHHCCSEEEESGGGEEETTEECHHHHHHHHH
T ss_pred HHHHHhcCCCEEEeCCceecCCCCcCHHHHHHHHH
Confidence 97766656653 222111 1 23567766543
No 117
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=95.76 E-value=0.093 Score=45.73 Aligned_cols=164 Identities=13% Similarity=0.094 Sum_probs=93.3
Q ss_pred cCcHHhHHHHHhcCCCeEEEeccCC-CC-----CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCC-
Q psy11600 74 QNPQQWIEPMADANVDQYTFHVEPV-DN-----VPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPV- 141 (277)
Q Consensus 74 ~~p~~~i~~l~~ag~d~i~~H~e~~-d~-----g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~- 141 (277)
.+|.+.++.+.++|++.+++. |.. ++ ....++.+++.+..|+-+ ..+.++.+.++|||.+.+-..+-
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~-d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~ 108 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLT-SIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFHF 108 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEE-ETTTSSCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC--
T ss_pred CCHHHHHHHHHHCCCCEEEEE-ecCcccCCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHHh
Confidence 368889999999999999764 321 21 378899998887766654 34557777789999998876522
Q ss_pred C--ChHHHHHHHHHhC--C-ccceeeCC----C--------------CCHHhHHHHHhh--cCceEEEEecCCCCCchhh
Q psy11600 142 D--NVPQVIRQIKEAG--M-KVGLAIKP----K--------------TPVDVIAEYIES--ADLVLIMTVEPGFGGQKFM 196 (277)
Q Consensus 142 ~--~~~~~~~~I~~~g--~-~~g~~i~p----~--------------t~~~~i~~~i~~--~d~vl~mav~Pgt~gq~~~ 196 (277)
. ++..+.+.++..| . +.-+++.+ | +........+.. ++.+.+..+......+..
T Consensus 109 ~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~- 187 (266)
T 2w6r_A 109 REIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY- 187 (266)
T ss_dssp ----CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTTCSCC-
T ss_pred CCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEEeecCCCCcCCC-
Confidence 1 1222333333333 1 11144443 1 122223233333 455555444432111111
Q ss_pred hhhhhhHHHHHhhCCCccEEEeCCCCc-CcHHHHHHccCCC---CCcccc
Q psy11600 197 QDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKCLTGF---GGQKFM 242 (277)
Q Consensus 197 ~~~l~kI~~l~~~~~~~~i~vdGgV~~-~tv~~~~~~gpg~---ggq~F~ 242 (277)
-++.++++++.. ++.+..-|||+- +.+.++.++|++. |+..+.
T Consensus 188 --~~~~i~~l~~~~-~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 188 --DTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 234 (266)
T ss_dssp --CHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-
T ss_pred --CHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHc
Confidence 144555555543 577889999994 8888898888874 554443
No 118
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.086 Score=46.59 Aligned_cols=181 Identities=13% Similarity=0.088 Sum_probs=102.0
Q ss_pred EeccccccccCCC--CCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCC
Q psy11600 37 LDVMDGTFVPNLT--FGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGM 113 (277)
Q Consensus 37 ~DimDg~fvp~~~--~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~ 113 (277)
+|+.||..|.-.. |.......++ .+.....+|.+..+.+.+.|++++ |+--.+ ...++|+.+++...
T Consensus 7 iDl~~G~~V~~~~G~~~~~~~~~~~--------~~~~~~~dp~~~A~~~~~~Ga~~l--~vvDL~~~n~~~i~~i~~~~~ 76 (260)
T 2agk_A 7 IDLHNGEVKQIVGGTLTSKKEDVPK--------TNFVSQHPSSYYAKLYKDRDVQGC--HVIKLGPNNDDAAREALQESP 76 (260)
T ss_dssp EEEETTEECC----------------------------CCCHHHHHHHHHHTTCTTC--EEEEESSSCHHHHHHHHHHST
T ss_pred EEEECCEEEEccccccccccccccc--------cccccCCCHHHHHHHHHHcCCCEE--EEEeCCCCCHHHHHHHHhcCC
Confidence 8999999985433 2211100011 111255799999999999999999 652112 35778999988877
Q ss_pred Ccccc----hhhhhHHHHhcCCCeEEeecCCCCC-----hHHHHHHHHHhCCc-cceeeCC------C------------
Q psy11600 114 KVGQV----LQDWIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEAGMK-VGLAIKP------K------------ 165 (277)
Q Consensus 114 ~~~d~----p~~~i~~~~~~g~d~it~H~E~~~~-----~~~~~~~I~~~g~~-~g~~i~p------~------------ 165 (277)
.|+.+ ...-++.+. +||+.|.+-..+.++ +..+.+.+++.|.+ .-+++.. +
T Consensus 77 ~pv~vgGGir~~~~~~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t 155 (260)
T 2agk_A 77 QFLQVGGGINDTNCLEWL-KWASKVIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLT 155 (260)
T ss_dssp TTSEEESSCCTTTHHHHT-TTCSCEEECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEE
T ss_pred ceEEEeCCCCHHHHHHHh-cCCCEEEECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCcccc
Confidence 77765 323667777 999999998765555 66666777776621 1122211 0
Q ss_pred --CCH-HhHHHHHhhcCceEEEEecC-CCCCchhhhhhhhhHHHHHhhCC---CccEEEeCCCC-cCcHHHHHHc
Q psy11600 166 --TPV-DVIAEYIESADLVLIMTVEP-GFGGQKFMQDMMPKVKWLRENYP---TLNIEVDGGVG-PNTIDECAKC 232 (277)
Q Consensus 166 --t~~-~~i~~~i~~~d~vl~mav~P-gt~gq~~~~~~l~kI~~l~~~~~---~~~i~vdGgV~-~~tv~~~~~~ 232 (277)
.++ +....+-+.++.+++..+.. |+ .+.+. ++.++++.+..+ .+.+..-||+. ++.+..+.+.
T Consensus 156 ~~~~~~e~a~~~~~~a~~il~t~i~~dG~-~~G~d---~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~ 226 (260)
T 2agk_A 156 DLELNADTFRELRKYTNEFLIHAADVEGL-CGGID---ELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDEL 226 (260)
T ss_dssp EEEESHHHHHHHTTTCSEEEEEC--------CCCC---HHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHH
T ss_pred CccHHHHHHHHHHHhcCEEEEEeeccccC-cCCCC---HHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHh
Confidence 123 33344434477777777665 32 11222 334455555443 67788889985 3566666666
No 119
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.73 E-value=0.09 Score=46.48 Aligned_cols=172 Identities=14% Similarity=0.140 Sum_probs=94.7
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCC----CHHHHHHHHhhCCCcc-c-----chhh---hhHHHHhc-CCCeEEeecCC
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDN----VPQVIRQIKEAGMKVG-Q-----VLQD---WIEPMADA-NVDQYTFHVEP 140 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~----g~~~i~~i~~~~~~~~-d-----~p~~---~i~~~~~~-g~d~it~H~E~ 140 (277)
+++..++.+.++|+|.+++.+--.+. ...+++.+++.....+ . .+++ +.+...++ |++++.+..=|
T Consensus 24 ~~~~~~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~~~~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~ 103 (264)
T 1xm3_A 24 SFDIQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDLSKYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVIG 103 (264)
T ss_dssp CHHHHHHHHHHHTCSEEEEETTSSTTC-------CTTCCGGGSEEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEECCBC
T ss_pred CHHHHHHHHHHcCCeEEEEcccccccCCCCHHHHHHHHHhcCCeEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEeecC
Confidence 46667888999999999998642232 2234444443211110 0 1343 55566666 56787665321
Q ss_pred CC-----ChHHHHHHHHHh---CCccceeeCCCCCHHhHHHHHh-hcCceEEEEecCCCCC-chhhhhhhhhHHHHHhhC
Q psy11600 141 VD-----NVPQVIRQIKEA---GMKVGLAIKPKTPVDVIAEYIE-SADLVLIMTVEPGFGG-QKFMQDMMPKVKWLRENY 210 (277)
Q Consensus 141 ~~-----~~~~~~~~I~~~---g~~~g~~i~p~t~~~~i~~~i~-~~d~vl~mav~Pgt~g-q~~~~~~l~kI~~l~~~~ 210 (277)
.. ......+..++. |+..+.-..+ + .+......+ ..|++ ++..+-++. .... -.+.++++++.
T Consensus 104 d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~-~-~~~a~~~~~~gad~v--~~~~~~~Gt~~~~~--~~~~l~~i~~~- 176 (264)
T 1xm3_A 104 CSRSLLPDPVETLKASEQLLEEGFIVLPYTSD-D-VVLARKLEELGVHAI--MPGASPIGSGQGIL--NPLNLSFIIEQ- 176 (264)
T ss_dssp CTTTCCBCHHHHHHHHHHHHHTTCCEEEEECS-C-HHHHHHHHHHTCSCB--EECSSSTTCCCCCS--CHHHHHHHHHH-
T ss_pred CCcccccchHHHHHHHHHHHCCCeEEEEEcCC-C-HHHHHHHHHhCCCEE--EECCcccCCCCCCC--CHHHHHHHHhc-
Confidence 11 344677777776 7665433333 2 233433332 36776 332222211 1111 13355666653
Q ss_pred CCccEEEeCCCC-cCcHHHHHHccCCC---CCcccc-cCHHHHHHHHH
Q psy11600 211 PTLNIEVDGGVG-PNTIDECAKCLTGF---GGQKFM-QDMMPKVKWLR 253 (277)
Q Consensus 211 ~~~~i~vdGgV~-~~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~ 253 (277)
.++-+.+.|||+ .+++.+++++|++. |+..+. ++..+.+++++
T Consensus 177 ~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~ 224 (264)
T 1xm3_A 177 AKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMK 224 (264)
T ss_dssp CSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 467889999996 89999999999985 665554 45556666554
No 120
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=95.73 E-value=0.16 Score=45.02 Aligned_cols=94 Identities=14% Similarity=0.041 Sum_probs=68.9
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhc--CCCCeeeeeeeccCcHHhHHH-HH
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNK--IPKAFFETHMMVQNPQQWIEP-MA 84 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~--~~~~~~d~Hlmv~~p~~~i~~-l~ 84 (277)
+=+.++|..+.++.++.+++. .++ +++.- -.|. ..||++.+++|++. .+++++-.+++..|..+.+.. +.
T Consensus 33 ~LiVALD~~~~~~al~l~~~l-~~~--v~~~KvG~~l~--~~~G~~~v~~L~~~a~~~g~~VflDlK~~DIpnTv~~a~~ 107 (260)
T 3eww_A 33 NLCLSADVSLARELLQLADAL-GPS--ICMLKTHVDIL--NDFTLDVMKELITLAKCHEFLIFENRKFADIGNTVKKQYE 107 (260)
T ss_dssp CEEEECCCSCHHHHHHHHHHH-GGG--CSEEEECGGGC--TTCCHHHHHHHHHHHHHHTCEEEEEEEECSCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHh-CCC--ceEEEEcHHHH--HHhCHHHHHHHHHHHhhcCCeEEEEeeccccHHHHHHHHH
Confidence 446788999999888888776 233 55555 2233 35899999999862 258899999999999888765 32
Q ss_pred ----h--cCCCeEEEeccCCCCCHHHHHHHHhh
Q psy11600 85 ----D--ANVDQYTFHVEPVDNVPQVIRQIKEA 111 (277)
Q Consensus 85 ----~--ag~d~i~~H~e~~d~g~~~i~~i~~~ 111 (277)
+ .++|++|+|. -+|+..+++.++.
T Consensus 108 ~a~~~~~~~ad~vTVha---~~G~~~~~aa~~~ 137 (260)
T 3eww_A 108 GGIFKIASWADLVNAHV---VPGSGVVKGLQEV 137 (260)
T ss_dssp CTTTCGGGTCSEEEEES---TTCTHHHHHHHHH
T ss_pred HHHHhhhccCCEEEEeC---CCCHHHHHHHHHh
Confidence 1 4799999996 4566778777664
No 121
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.57 E-value=0.15 Score=46.30 Aligned_cols=74 Identities=11% Similarity=0.127 Sum_probs=50.9
Q ss_pred eeeeeeeccCcHHhHHHHHhcC--CCeEEEeccC-CCCCHHHHHHHHhh-CCC-cc-----cch---hhhhHHHHhcCCC
Q psy11600 66 FFETHMMVQNPQQWIEPMADAN--VDQYTFHVEP-VDNVPQVIRQIKEA-GMK-VG-----QVL---QDWIEPMADANVD 132 (277)
Q Consensus 66 ~~d~Hlmv~~p~~~i~~l~~ag--~d~i~~H~e~-~d~g~~~i~~i~~~-~~~-~~-----d~p---~~~i~~~~~~g~d 132 (277)
++-+=|=+.++++.++.+.+.+ ++++-++.+. ...|+..|+++++. ... +. |.| ..+++.++++|+|
T Consensus 26 ~LiVALD~~~~~eal~l~~~l~~~v~~vKVG~~lf~~~G~~~V~~Lk~~~g~~IflDlKl~DIpnTv~~av~~~a~lGaD 105 (303)
T 3ru6_A 26 KLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEELKKVDDFKIFLDLKFHDIPNTMADACEEVSKLGVD 105 (303)
T ss_dssp EEEEECCCSSHHHHHHHHHHTTTSSCEEEECHHHHHHHTHHHHHHHHHHCCCEEEEEEEECSCHHHHHHHHHHHHTTTCS
T ss_pred CEEEEeCCCCHHHHHHHHHHhCCCccEEEeCHHHHHHhCHHHHHHHHHhhCCCEEEEeeeccCchhHHHHHHHHHhcCCC
Confidence 3444444567777776666665 4455555443 24599999999987 432 33 344 6788999999999
Q ss_pred eEEeecC
Q psy11600 133 QYTFHVE 139 (277)
Q Consensus 133 ~it~H~E 139 (277)
++|+|..
T Consensus 106 ~vTVHa~ 112 (303)
T 3ru6_A 106 MINIHAS 112 (303)
T ss_dssp EEEEEGG
T ss_pred EEEEecc
Confidence 9999997
No 122
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=95.45 E-value=0.019 Score=51.85 Aligned_cols=63 Identities=8% Similarity=-0.081 Sum_probs=46.3
Q ss_pred ccCcHHhHHHHHhcCCCeEEEec-----cC-CCC-----CHHHHHHHHhhCCCcccc---h--hhhhHHHHhcCCCeEE
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHV-----EP-VDN-----VPQVIRQIKEAGMKVGQV---L--QDWIEPMADANVDQYT 135 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~-----e~-~d~-----g~~~i~~i~~~~~~~~d~---p--~~~i~~~~~~g~d~it 135 (277)
-.+|.+.++.+.++|++.+++-- +- ..| .++.++.+++.+..|+.. + .+.++.+.++|||.|.
T Consensus 27 ~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 27 DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYID 105 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHTCSEEE
T ss_pred cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccchHHHHHHHHCCCCEEE
Confidence 44899999999999999994321 11 122 588999999887666543 4 5566788889999996
No 123
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.37 E-value=0.19 Score=44.91 Aligned_cols=162 Identities=12% Similarity=0.097 Sum_probs=95.7
Q ss_pred CCeeeeeeeccCcHHh---HHHHHhcCCC-eEEEeccCC--CC----------CHHHHHHHHhhCCCcccc---h-----
Q psy11600 64 KAFFETHMMVQNPQQW---IEPMADANVD-QYTFHVEPV--DN----------VPQVIRQIKEAGMKVGQV---L----- 119 (277)
Q Consensus 64 ~~~~d~Hlmv~~p~~~---i~~l~~ag~d-~i~~H~e~~--d~----------g~~~i~~i~~~~~~~~d~---p----- 119 (277)
+.|+-+-++-.+++++ ++.+.++|+| .+.+|+-.- .+ -.++++++|+.+..|+-+ |
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~ 172 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLV 172 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHH
Confidence 7888888887777776 5556778999 999987421 11 246788888877655543 2
Q ss_pred --hhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhh
Q psy11600 120 --QDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQ 197 (277)
Q Consensus 120 --~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~ 197 (277)
.++++.+.++|+|.|++|-- +. .|..+...+.- +.+....- .-|.+|....+
T Consensus 173 ~~~~~a~~~~~~G~d~i~v~~~----~~------------~g~~i~~~~~~----~~~~~~~~------~gG~sg~~~~~ 226 (311)
T 1jub_A 173 HFDIMAEILNQFPLTYVNSVNS----IG------------NGLFIDPEAES----VVIKPKDG------FGGIGGAYIKP 226 (311)
T ss_dssp HHHHHHHHHTTSCCCEEEECCC----EE------------EEECEETTTTE----ESCSGGGG------EEEEESGGGHH
T ss_pred HHHHHHHHHHHcCCcEEEecCC----CC------------cCceeccCCCC----cccccCCC------CCccccccccH
Confidence 23467888889999998742 10 01111100000 00000000 01222333334
Q ss_pred hhhhhHHHHHhhCC-CccEEEeCCC-CcCcHHHHHHccCCC---CCccc--ccCHHHHHHH
Q psy11600 198 DMMPKVKWLRENYP-TLNIEVDGGV-GPNTIDECAKCLTGF---GGQKF--MQDMMPKVKW 251 (277)
Q Consensus 198 ~~l~kI~~l~~~~~-~~~i~vdGgV-~~~tv~~~~~~gpg~---ggq~F--~~~~~~kI~~ 251 (277)
..++.+.++++..+ ++.+...||| +.+.+.++..+|++. |...+ .|...+++++
T Consensus 227 ~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~ 287 (311)
T 1jub_A 227 TALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIK 287 (311)
T ss_dssp HHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHHH
Confidence 44666777776653 7889999999 556777777889885 44444 2556666653
No 124
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=95.32 E-value=0.74 Score=39.86 Aligned_cols=148 Identities=20% Similarity=0.272 Sum_probs=82.5
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCC---CHHHHHHHHhhCCCccc------chhhhhHHHHhcCCCeEEeecCCCCChH
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDN---VPQVIRQIKEAGMKVGQ------VLQDWIEPMADANVDQYTFHVEPVDNVP 145 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~---g~~~i~~i~~~~~~~~d------~p~~~i~~~~~~g~d~it~H~E~~~~~~ 145 (277)
++++ ++ +.++|+|++-|=+....- .++..++|.+....+.. .+++....+.+.+.|++-+|=+ ..+
T Consensus 30 ~~ed-~~-a~~~gaD~iGfIf~~~SpR~V~~~~A~~i~~~~~~~~~~v~v~v~~~ei~~~i~~~~ld~vQLHG~---E~~ 104 (228)
T 4aaj_A 30 SLEE-LE-IVEKHADATGVVVNSNSKRRIPLEKAREIIENSAIPVFLVSTMVGFSEWAMAIERTGAQYIQVHSN---ALP 104 (228)
T ss_dssp SHHH-HH-HHHTTCSEEEEECSSSSTTBCCHHHHHHHHHHCSSCEEEEECCCCHHHHHHHHHHHTCSEEEECSC---CCH
T ss_pred cHHH-HH-HHHcCCCEEEEEecCCCCCCCCHHHHHHHHHhhCCCCEEEeccCchHHHHHHHHhccchheecccc---cCH
Confidence 5655 55 467899999876543211 56667777665433221 1677778888899999999964 334
Q ss_pred HHHHHHHH-hCCccceeeCCCC----CHHhHHHH---Hh--hcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccE
Q psy11600 146 QVIRQIKE-AGMKVGLAIKPKT----PVDVIAEY---IE--SADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNI 215 (277)
Q Consensus 146 ~~~~~I~~-~g~~~g~~i~p~t----~~~~i~~~---i~--~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i 215 (277)
...+.+++ .+.+.=-++.... +-+....+ +. .+|.+++=+ +|..|+.|.-+++..+. . +..+
T Consensus 105 ~~~~~l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs--~GGtG~~fDW~~~~~~~---~---~~p~ 176 (228)
T 4aaj_A 105 QTIDTLKKEFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDT--GAGSGKLHDLRVSSLVA---R---KIPV 176 (228)
T ss_dssp HHHHHHHHHHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC---------CCCHHHHHHH---H---HSCE
T ss_pred HHHHHHhhccCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCC--CCCCcCcCChHHHHHhh---h---cCCe
Confidence 44455543 4544323333322 11111111 11 367766544 56667777755544432 2 2357
Q ss_pred EEeCCCCcCcHHHHHH-ccCC
Q psy11600 216 EVDGGVGPNTIDECAK-CLTG 235 (277)
Q Consensus 216 ~vdGgV~~~tv~~~~~-~gpg 235 (277)
.+.||+|.+|+.+..+ .+|-
T Consensus 177 iLAGGL~peNV~~Ai~~~~P~ 197 (228)
T 4aaj_A 177 IVAGGLNAENVEEVIKVVKPY 197 (228)
T ss_dssp EEESSCCTTTHHHHHHHHCCS
T ss_pred EEECCCCHHHHHHHHHHhCCC
Confidence 8999999999988655 5664
No 125
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=95.27 E-value=0.37 Score=47.06 Aligned_cols=151 Identities=18% Similarity=0.150 Sum_probs=80.9
Q ss_pred cHHhHHHHHhcCCCeEEEeccCCCC----CHHHHHHHHhhCCC--cccchhhhhHHHHhcCCCeEEeecCCCCChHHHHH
Q psy11600 76 PQQWIEPMADANVDQYTFHVEPVDN----VPQVIRQIKEAGMK--VGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIR 149 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~H~e~~d~----g~~~i~~i~~~~~~--~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~ 149 (277)
+.+.+++..++|++++ |+...+. -.+..+++++.+.. ...+..++++...+.||| .+|+. .-.
T Consensus 27 l~~~ve~al~~Gv~~v--QlR~K~~~~~~~~~~a~~l~~l~~~~~v~liIND~~dlA~~~gAd--GVHLg---q~d---- 95 (540)
T 3nl6_A 27 LYGQVEAGLQNGVTLV--QIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGAD--GIHVG---QDD---- 95 (540)
T ss_dssp HHHHHHHHHHTTCSEE--EECCSSSCTTHHHHHHHHHHHHHHHTTCCEEECSCSHHHHHTTCS--EEEEC---TTS----
T ss_pred HHHHHHHHHHCCCCEE--EEecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeCcHHHHHHcCCC--EEEEC---hhh----
Confidence 4467888899999999 7765543 23344555544421 112234577777788888 46776 322
Q ss_pred HHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCC-ccEEEeCCCCcCcHHH
Q psy11600 150 QIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPT-LNIEVDGGVGPNTIDE 228 (277)
Q Consensus 150 ~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~-~~i~vdGgV~~~tv~~ 228 (277)
.++....+.+ .-+.+++.+++ + .+.+.+..+..+. .|....|-|-
T Consensus 96 ----------------l~~~~ar~~l-g~~~iiG~S~h--t---------~eea~~A~~~G~~~aDYv~~Gpvf------ 141 (540)
T 3nl6_A 96 ----------------MPIPMIRKLV-GPDMVIGWSVG--F---------PEEVDELSKMGPDMVDYIGVGTLF------ 141 (540)
T ss_dssp ----------------SCHHHHHHHH-CTTSEEEEEEC--S---------HHHHHHHHHTCC--CCEEEESCCS------
T ss_pred ----------------cCHHHHHHHh-CCCCEEEEECC--C---------HHHHHHHHHcCCCCCCEEEEcCCC------
Confidence 1222233322 23677777765 2 1112222222211 5665544443
Q ss_pred HHHccCCCCCcccc--cCHHHHHHHHHhh-----CCCCeEEEeCCCCccCHHHhh
Q psy11600 229 CAKCLTGFGGQKFM--QDMMPKVKWLREN-----YPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 229 ~~~~gpg~ggq~F~--~~~~~kI~~l~~~-----~~~~~I~VDGGI~~~~~~~~~ 276 (277)
|....+... +--.+.++++++. ..++.+.+.||||++|++++.
T Consensus 142 -----~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~ 191 (540)
T 3nl6_A 142 -----PTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVL 191 (540)
T ss_dssp -----CCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHH
T ss_pred -----CCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHH
Confidence 221222221 1235555555543 246789999999999998874
No 126
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=95.15 E-value=0.16 Score=46.64 Aligned_cols=126 Identities=17% Similarity=0.150 Sum_probs=86.5
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEecccc-------------ccccCCCCCHHHHHHHHhcCCCCeeeeeee-
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDG-------------TFVPNLTFGHPVVKCLRNKIPKAFFETHMM- 72 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg-------------~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlm- 72 (277)
.+...|...|...+.+..+.+++.|+|. |||-=| .+..+..+-.++++++++. .++|+.+=+-
T Consensus 59 p~~vQL~g~~p~~~~~aA~~a~~~G~D~--IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~-v~~PV~vKiR~ 135 (350)
T 3b0p_A 59 PIALQLAGSDPKSLAEAARIGEAFGYDE--INLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA-VRVPVTVKMRL 135 (350)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHHTTCSE--EEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH-CSSCEEEEEES
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHcCCCE--EEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH-hCCceEEEEec
Confidence 4677777778888999999999999998 555422 2223333445678888886 4788877332
Q ss_pred -cc------CcHHhHHHHHhcCCCeEEEeccCCC-------------CCHHHHHHHHhhC-CCcccc------hhhhhHH
Q psy11600 73 -VQ------NPQQWIEPMADANVDQYTFHVEPVD-------------NVPQVIRQIKEAG-MKVGQV------LQDWIEP 125 (277)
Q Consensus 73 -v~------~p~~~i~~l~~ag~d~i~~H~e~~d-------------~g~~~i~~i~~~~-~~~~d~------p~~~i~~ 125 (277)
.. +..+.++.+.++|+|+|++|--... .....++++++.. ..|+-. +++..+.
T Consensus 136 g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~ 215 (350)
T 3b0p_A 136 GLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFH 215 (350)
T ss_dssp CBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHH
T ss_pred CcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHH
Confidence 22 2345678899999999999953211 1356788998886 555532 6666665
Q ss_pred HHhcCCCeEEee
Q psy11600 126 MADANVDQYTFH 137 (277)
Q Consensus 126 ~~~~g~d~it~H 137 (277)
+. |||.|.+-
T Consensus 216 l~--GaD~V~iG 225 (350)
T 3b0p_A 216 LK--RVDGVMLG 225 (350)
T ss_dssp HT--TSSEEEEC
T ss_pred Hh--CCCEEEEC
Confidence 54 89999884
No 127
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=94.81 E-value=0.36 Score=43.14 Aligned_cols=124 Identities=11% Similarity=-0.042 Sum_probs=80.2
Q ss_pred EeeeccccCcccHHHHHHHHHHcCCC-EEEEeccccccccCC----CCC------HHHHHHHHhcCCCCeeeeeeecc-C
Q psy11600 8 IGPSILNSDLSNLHSESQNLLDSGAD-YLHLDVMDGTFVPNL----TFG------HPVVKCLRNKIPKAFFETHMMVQ-N 75 (277)
Q Consensus 8 ~~~s~~~~d~~~l~~~~~~l~~~~~~-~~h~DimDg~fvp~~----~~g------~~~v~~l~~~~~~~~~d~Hlmv~-~ 75 (277)
+..||...+...+.+..+.+++.|+| .+-+.+- +||. .|| .++++++|+. .++|+.+=+-.. +
T Consensus 96 ~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~----~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~ 170 (311)
T 1jub_A 96 IFFSIAGMSAAENIAMLKKIQESDFSGITELNLS----CPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFD 170 (311)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESC----CCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCS
T ss_pred EEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEecc----CCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCC
Confidence 56678877888999999999999999 8555442 3332 233 4778888875 577777644321 2
Q ss_pred cH---HhHHHHHhcCCCeEEEeccC-----CC---------------C--C-------HHHHHHHHhhC--CCcccc---
Q psy11600 76 PQ---QWIEPMADANVDQYTFHVEP-----VD---------------N--V-------PQVIRQIKEAG--MKVGQV--- 118 (277)
Q Consensus 76 p~---~~i~~l~~ag~d~i~~H~e~-----~d---------------~--g-------~~~i~~i~~~~--~~~~d~--- 118 (277)
.. +..+.+.++|+|.+++|--. .+ | | ...++++++.. +.|+-.
T Consensus 171 ~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GG 250 (311)
T 1jub_A 171 LVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGG 250 (311)
T ss_dssp HHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESS
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECC
Confidence 22 23677788999999887321 00 0 2 35677777765 444422
Q ss_pred ---hhhhhHHHHhcCCCeEEee
Q psy11600 119 ---LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 119 ---p~~~i~~~~~~g~d~it~H 137 (277)
+++..+.+ .+|||.|.+-
T Consensus 251 I~~~~da~~~l-~~GAd~V~vg 271 (311)
T 1jub_A 251 IETGQDAFEHL-LCGATMLQIG 271 (311)
T ss_dssp CCSHHHHHHHH-HHTCSEEEEC
T ss_pred CCCHHHHHHHH-HcCCCEEEEc
Confidence 66666655 5788888773
No 128
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=94.74 E-value=0.33 Score=41.25 Aligned_cols=101 Identities=15% Similarity=0.064 Sum_probs=69.2
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN 100 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~ 100 (277)
.++++...+.|+|++|. |+ +.++.++..++. +.++-.. +.+|.+. ....+.|+|++.++....-|
T Consensus 73 ~d~~~~A~~~GAd~v~~--------~~--~d~~v~~~~~~~--g~~~i~G--~~t~~e~-~~A~~~Gad~v~~fpa~~~g 137 (207)
T 2yw3_A 73 PKEAEAALEAGAAFLVS--------PG--LLEEVAALAQAR--GVPYLPG--VLTPTEV-ERALALGLSALKFFPAEPFQ 137 (207)
T ss_dssp HHHHHHHHHHTCSEEEE--------SS--CCHHHHHHHHHH--TCCEEEE--ECSHHHH-HHHHHTTCCEEEETTTTTTT
T ss_pred HHHHHHHHHcCCCEEEc--------CC--CCHHHHHHHHHh--CCCEEec--CCCHHHH-HHHHHCCCCEEEEecCcccc
Confidence 37788888899999983 32 345666766654 3444433 5566654 45567899999997632235
Q ss_pred CHHHHHHHHhhC-CCcccc----hhhhhHHHHhcCCCeEEe
Q psy11600 101 VPQVIRQIKEAG-MKVGQV----LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 101 g~~~i~~i~~~~-~~~~d~----p~~~i~~~~~~g~d~it~ 136 (277)
|+..+++++... ..|+-. -.+=+.++.++|++.+.+
T Consensus 138 G~~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aGa~~vav 178 (207)
T 2yw3_A 138 GVRVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALPNLLAVG 178 (207)
T ss_dssp HHHHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCSSBSCEE
T ss_pred CHHHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCCCcEEEE
Confidence 899999999876 455433 346677788889887765
No 129
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=94.52 E-value=0.3 Score=42.38 Aligned_cols=115 Identities=10% Similarity=0.059 Sum_probs=73.9
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPV 98 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~ 98 (277)
+..+.++.+++.|++.+|+==+++.+. ......+.++++++. .++|+-+.=-+.++.+ ++.+.++|+|.+ |+-..
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~-~~iPvi~~ggi~~~~~-i~~~~~~Gad~v--~lg~~ 105 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPL-TTLPIIASGGAGKMEH-FLEAFLAGADKA--LAASV 105 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGG-CCSCEEEESCCCSTHH-HHHHHHHTCSEE--ECCCC
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHh-cCCCEEEECCCCCHHH-HHHHHHcCCcHh--hhhHH
Confidence 567788889999999999711122221 122346889999986 6888888666666554 566778899999 55443
Q ss_pred CC----CHHHHHHHHhhCC-------Ccccc---------------------hhhhhHHHHhcCCCeEEeec
Q psy11600 99 DN----VPQVIRQIKEAGM-------KVGQV---------------------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 99 d~----g~~~i~~i~~~~~-------~~~d~---------------------p~~~i~~~~~~g~d~it~H~ 138 (277)
.. .+..++.+.+... ..+++ +.++++.+.++|++.|.+|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~ 177 (266)
T 2w6r_A 106 FHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTS 177 (266)
T ss_dssp C------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEE
T ss_pred HHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEEe
Confidence 32 4566666543321 11222 35677888899999999874
No 130
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.43 E-value=0.39 Score=43.47 Aligned_cols=166 Identities=10% Similarity=0.078 Sum_probs=95.0
Q ss_pred HHHHHHHhcCCCCeeeeeeeccC-------cHHhHHHHHh--cCCCeEEEeccCC--CC---------CHHHHHHHHhhC
Q psy11600 53 PVVKCLRNKIPKAFFETHMMVQN-------PQQWIEPMAD--ANVDQYTFHVEPV--DN---------VPQVIRQIKEAG 112 (277)
Q Consensus 53 ~~v~~l~~~~~~~~~d~Hlmv~~-------p~~~i~~l~~--ag~d~i~~H~e~~--d~---------g~~~i~~i~~~~ 112 (277)
.+++.+++.-.+.++-+.+.-.+ ++++.+.+.. .|+|.+.+|+-+- .| ..++++++|+..
T Consensus 122 ~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~ 201 (336)
T 1f76_A 122 NLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQ 201 (336)
T ss_dssp HHHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 45666665323557888887655 5666555542 3799999997532 11 246888888875
Q ss_pred ---------CCcccc---h-------hhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHH
Q psy11600 113 ---------MKVGQV---L-------QDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAE 173 (277)
Q Consensus 113 ---------~~~~d~---p-------~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~ 173 (277)
..|+-+ | .+.++.+.++|+|.|++|-- .... ... ..+ +.
T Consensus 202 ~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~---~~~~-----------~~~-~~~--~~----- 259 (336)
T 1f76_A 202 NDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNT---TLDR-----------SLV-QGM--KN----- 259 (336)
T ss_dssp HHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCC---BCCC-----------TTS-TTS--TT-----
T ss_pred HhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCC---cccc-----------ccc-ccc--cc-----
Confidence 455533 2 33467888999999999742 1000 000 000 00
Q ss_pred HHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCC-CccEEEeCCCC-cCcHHHHHHccCCC---CCccc--ccCHH
Q psy11600 174 YIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVG-PNTIDECAKCLTGF---GGQKF--MQDMM 246 (277)
Q Consensus 174 ~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV~-~~tv~~~~~~gpg~---ggq~F--~~~~~ 246 (277)
... ..|.+|....+..++.+.++++..+ ++.+...|||. .+.+.++.++|++. |.... .|...
T Consensus 260 -~~~---------~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~ 329 (336)
T 1f76_A 260 -CDQ---------TGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLI 329 (336)
T ss_dssp -TTC---------SSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHH
T ss_pred -ccc---------CCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHH
Confidence 000 0011232222344556666666543 78899999996 56777788889886 44332 35666
Q ss_pred HHHH
Q psy11600 247 PKVK 250 (277)
Q Consensus 247 ~kI~ 250 (277)
.|++
T Consensus 330 ~~i~ 333 (336)
T 1f76_A 330 KEIV 333 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6664
No 131
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=94.37 E-value=1.7 Score=39.71 Aligned_cols=224 Identities=11% Similarity=0.048 Sum_probs=110.9
Q ss_pred HHHHHHHHHcCCCEEEEecc-----ccccccC--CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 21 HSESQNLLDSGADYLHLDVM-----DGTFVPN--LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~Dim-----Dg~fvp~--~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
.++.+..++.|+..+ .+. |-.|--. ..=+|+.++++++. .++|+..=..+.+ ..+.+.+.++|+|+|-
T Consensus 27 ~e~A~~ae~aGA~aI--~~l~~v~~d~~~~~G~arm~~p~~i~~I~~a-v~iPV~~K~rig~-~~e~qilea~GaD~Id- 101 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAV--MALERVPADIRAAGGVARMSDPALIEEIMDA-VSIPVMAKCRIGH-TTEALVLEAIGVDMID- 101 (330)
T ss_dssp HHHHHHHHHHTCSEE--EECSSCHHHHC--CCCCCCCCHHHHHHHHHH-CSSCEEEEEETTC-HHHHHHHHHTTCSEEE-
T ss_pred HHHHHHHHHcCCCEE--EecCCccccccCCcchhhcCCHHHHHHHHHh-cCCCeEEEEeecc-hHHHHHHHHcCCCEEe-
Confidence 456777888999994 332 3222111 11279999999987 7899998888866 3456677789999982
Q ss_pred eccCCCCCHHHHHHH-HhhCCCcccc----hhhhhHHHHhcCCCeEEeecCCCC-ChHHHHHHHHHhCCcccee-eCCCC
Q psy11600 94 HVEPVDNVPQVIRQI-KEAGMKVGQV----LQDWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGLA-IKPKT 166 (277)
Q Consensus 94 H~e~~d~g~~~i~~i-~~~~~~~~d~----p~~~i~~~~~~g~d~it~H~E~~~-~~~~~~~~I~~~g~~~g~~-i~p~t 166 (277)
-.+..+-. +.+..+ |+....++-. ..+-+... +.||++|+.|-||+. .+.+..+.+|.+. .++. +...+
T Consensus 102 ~s~~l~p~-d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~--~~~~~~s~~~ 177 (330)
T 2yzr_A 102 ESEVLTQA-DPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMN--EAIAQLQRMT 177 (330)
T ss_dssp EETTSCCS-CSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHH--HHHHHHTTSC
T ss_pred hhccCCHH-HHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHH--HHHHHhccCC
Confidence 11111100 000000 0000111111 22233333 889999999998765 3444422222100 0000 01111
Q ss_pred CHHhHHHH--HhhcCce---------EE--------EEecCCCCCchhhhhhhhhHHHHHhhCC-CccEEEeCCC-CcCc
Q psy11600 167 PVDVIAEY--IESADLV---------LI--------MTVEPGFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGV-GPNT 225 (277)
Q Consensus 167 ~~~~i~~~--i~~~d~v---------l~--------mav~Pgt~gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV-~~~t 225 (277)
-+.+... -..+|++ .+ -.+.|.+.-.......++.++++++... -+-+...||| +.++
T Consensus 178 -~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IPVV~VAeGGI~Tped 256 (330)
T 2yzr_A 178 -DEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVVNFAAGGVATPAD 256 (330)
T ss_dssp -HHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCSSEEEECSCCCSHHH
T ss_pred -HHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCCeEEEEECCCCCHHH
Confidence 1111110 0112220 00 0111111000001222344555554321 1222578999 5999
Q ss_pred HHHHHHccCCC---CCcccc-cCHHHHHHHHHh
Q psy11600 226 IDECAKCLTGF---GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 226 v~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~ 254 (277)
+..+++.|++. |+..|. ++.....+++++
T Consensus 257 a~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ 289 (330)
T 2yzr_A 257 AALMMQLGSDGVFVGSGIFKSENPLERARAIVE 289 (330)
T ss_dssp HHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHH
Confidence 99999999885 777775 567777777765
No 132
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=94.35 E-value=0.27 Score=45.01 Aligned_cols=118 Identities=12% Similarity=0.147 Sum_probs=74.6
Q ss_pred cHHHHHHHHHHcCCCEEEEecccc----cc-ccC--C---CCC----------HHHHHHHHhcCCCCeeeeeeecc----
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDG----TF-VPN--L---TFG----------HPVVKCLRNKIPKAFFETHMMVQ---- 74 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg----~f-vp~--~---~~g----------~~~v~~l~~~~~~~~~d~Hlmv~---- 74 (277)
.+.+..++++++|.|.+-+-.--| +| .|+ - .|| .++++++|+.. +.++-+=|-..
T Consensus 145 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~ 223 (340)
T 3gr7_A 145 AFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHP 223 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCST
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccC
Confidence 344556667888999944333211 11 121 1 233 68999999986 77777766532
Q ss_pred ------CcHHhHHHHHhcCCCeEEEeccC--------CCC-CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcC-CCe
Q psy11600 75 ------NPQQWIEPMADANVDQYTFHVEP--------VDN-VPQVIRQIKEAGMKVGQV-----LQDWIEPMADAN-VDQ 133 (277)
Q Consensus 75 ------~p~~~i~~l~~ag~d~i~~H~e~--------~d~-g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g-~d~ 133 (277)
++.+.++.+.++|+|++++|.-. ..+ ...+++++|+....|+-. -.+-++.+.+.| ||.
T Consensus 224 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~ 303 (340)
T 3gr7_A 224 DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADL 303 (340)
T ss_dssp TSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeE
Confidence 34556888999999999888311 011 356788999887666533 123445556666 999
Q ss_pred EEee
Q psy11600 134 YTFH 137 (277)
Q Consensus 134 it~H 137 (277)
|.+=
T Consensus 304 V~iG 307 (340)
T 3gr7_A 304 VFLG 307 (340)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9883
No 133
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=94.31 E-value=0.7 Score=41.12 Aligned_cols=122 Identities=11% Similarity=0.035 Sum_probs=77.0
Q ss_pred Eeeec--cccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHh
Q psy11600 8 IGPSI--LNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMAD 85 (277)
Q Consensus 8 ~~~s~--~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ 85 (277)
=|||- ++.| .+..+..+..++.|++.+|+=--++-|- =+.+.++.+|+. .++|+..-=.+.++. ++.....
T Consensus 68 aSPSkG~i~~~-~dp~~~A~~y~~~GA~~IsVltd~~~f~----Gs~~~L~~ir~~-v~lPVl~Kdfi~d~~-qi~ea~~ 140 (272)
T 3tsm_A 68 ASPSKGLIRPD-FDPPALAKAYEEGGAACLSVLTDTPSFQ----GAPEFLTAARQA-CSLPALRKDFLFDPY-QVYEARS 140 (272)
T ss_dssp EETTTEESCSS-CCHHHHHHHHHHTTCSEEEEECCSTTTC----CCHHHHHHHHHT-SSSCEEEESCCCSTH-HHHHHHH
T ss_pred CCCCCCccCCC-CCHHHHHHHHHHCCCCEEEEeccccccC----CCHHHHHHHHHh-cCCCEEECCccCCHH-HHHHHHH
Confidence 36773 4333 3566777888999999999755333332 267889999985 788886544555665 5777889
Q ss_pred cCCCeEEEeccCCCCCHHHHHHH----HhhCCCc-ccc-hhhhhHHHHhcCCCeEEeec
Q psy11600 86 ANVDQYTFHVEPVDNVPQVIRQI----KEAGMKV-GQV-LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 86 ag~d~i~~H~e~~d~g~~~i~~i----~~~~~~~-~d~-p~~~i~~~~~~g~d~it~H~ 138 (277)
+|||.+ ++.+....+..++.+ ++.+..+ .++ ..+-++...++|+++|.+..
T Consensus 141 ~GAD~V--lLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinn 197 (272)
T 3tsm_A 141 WGADCI--LIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNN 197 (272)
T ss_dssp TTCSEE--EEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEEC
T ss_pred cCCCEE--EEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECC
Confidence 999999 544433334444443 4443332 233 23334556678888888763
No 134
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=94.26 E-value=0.36 Score=43.43 Aligned_cols=88 Identities=17% Similarity=0.273 Sum_probs=53.0
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCC--CCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEE
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLT--FGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYT 92 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~--~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~ 92 (277)
.+...+.++++.+.+.|+..+++ ..|. -|.+. .=.++++.+++. ++.+.+..-.. ..+.++.+.++|++.+.
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~--~gGe-~p~~~~~~~~~li~~i~~~--~~~i~~s~g~l-~~e~l~~L~~ag~~~v~ 157 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVL--QSGE-DPYXMPDVISDIVKEIKKM--GVAVTLSLGEW-PREYYEKWKEAGADRYL 157 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEE--EESC-CGGGTTHHHHHHHHHHHTT--SCEEEEECCCC-CHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEE--EeCC-CCCccHHHHHHHHHHHHhc--CceEEEecCCC-CHHHHHHHHHhCCCEEe
Confidence 34556677788888889998655 6766 13332 224567777753 33333222211 35578899999999996
Q ss_pred EeccCCCCCHHHHHHHHh
Q psy11600 93 FHVEPVDNVPQVIRQIKE 110 (277)
Q Consensus 93 ~H~e~~d~g~~~i~~i~~ 110 (277)
+-+|+.+ +.+.+.+++
T Consensus 158 i~let~~--~~~~~~i~~ 173 (348)
T 3iix_A 158 LRHETAN--PVLHRKLRP 173 (348)
T ss_dssp CCCBCSC--HHHHHHHST
T ss_pred eeeeeCC--HHHHHHhCC
Confidence 5555543 555555543
No 135
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.24 E-value=0.75 Score=40.89 Aligned_cols=68 Identities=19% Similarity=0.242 Sum_probs=44.1
Q ss_pred HHHHHHHHHcCCCEEEEeccc---cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEe
Q psy11600 21 HSESQNLLDSGADYLHLDVMD---GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFH 94 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimD---g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H 94 (277)
.+-++.|.+.|+++ +.+-= +.|+|.+.--.+.++.+++. ++.++.+|+ .| .+.++...++|++.+++-
T Consensus 29 ~~i~~~L~~~Gv~~--IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~--~n-~~~i~~a~~~G~~~V~i~ 99 (295)
T 1ydn_A 29 IALINRLSDCGYAR--IEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLV--PN-MKGYEAAAAAHADEIAVF 99 (295)
T ss_dssp HHHHHHHTTTTCSE--EEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEEC--SS-HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCcCE--EEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEe--CC-HHHHHHHHHCCCCEEEEE
Confidence 34456677777776 33321 33455544334677888764 788888876 45 456888899999999443
No 136
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.17 E-value=0.17 Score=45.32 Aligned_cols=124 Identities=11% Similarity=-0.019 Sum_probs=81.3
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCC---EEEEeccccccccCC----CCC------HHHHHHHHhcCCCCeeeeeeec
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGAD---YLHLDVMDGTFVPNL----TFG------HPVVKCLRNKIPKAFFETHMMV 73 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~---~~h~DimDg~fvp~~----~~g------~~~v~~l~~~~~~~~~d~Hlmv 73 (277)
.+..+|...+...+.+..+.+.+.|+| .+++.+- .|+. .|| .+.++++|+. .++|+.+=+-.
T Consensus 95 p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~----~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~ 169 (314)
T 2e6f_A 95 PLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLS----CPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPP 169 (314)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC----CCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcC----CCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECC
Confidence 467788888888899999999999999 8888764 2332 122 4688899886 46777665432
Q ss_pred c-C---cHHhHHHHHhcC-CCeEEEec--------cCCC-----------C---C-------HHHHHHHHhhC-CCcccc
Q psy11600 74 Q-N---PQQWIEPMADAN-VDQYTFHV--------EPVD-----------N---V-------PQVIRQIKEAG-MKVGQV 118 (277)
Q Consensus 74 ~-~---p~~~i~~l~~ag-~d~i~~H~--------e~~d-----------~---g-------~~~i~~i~~~~-~~~~d~ 118 (277)
. + ..+..+.+.++| +|.+++|- |... + | ...++++++.. ..|+-.
T Consensus 170 ~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~ 249 (314)
T 2e6f_A 170 YFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFG 249 (314)
T ss_dssp CCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEE
Confidence 2 2 222367778999 99998773 2100 0 2 46777777776 444422
Q ss_pred ------hhhhhHHHHhcCCCeEEe
Q psy11600 119 ------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 ------p~~~i~~~~~~g~d~it~ 136 (277)
+++..+.+ .+|||.|.+
T Consensus 250 ~GGI~~~~da~~~l-~~GAd~V~i 272 (314)
T 2e6f_A 250 CGGVYSGEDAFLHI-LAGASMVQV 272 (314)
T ss_dssp ESSCCSHHHHHHHH-HHTCSSEEE
T ss_pred ECCCCCHHHHHHHH-HcCCCEEEE
Confidence 56555555 568888776
No 137
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=94.14 E-value=0.14 Score=43.99 Aligned_cols=174 Identities=10% Similarity=0.179 Sum_probs=97.2
Q ss_pred EEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccC-C----C-CCHHHHHHHH
Q psy11600 36 HLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEP-V----D-NVPQVIRQIK 109 (277)
Q Consensus 36 h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~-~----d-~g~~~i~~i~ 109 (277)
-+|++||..|.- .-|. ++.++ ....+|.+.++.+.++|+++++++ |. . . .....++.++
T Consensus 6 ~id~~~g~~vk~-~~G~------~~~~~-------~~~~~~~~~a~~~~~~Gad~i~v~-d~~~~~~~~~~~~~~i~~i~ 70 (241)
T 1qo2_A 6 AIDLFRGKVARM-IKGR------KENTI-------FYEKDPVELVEKLIEEGFTLIHVV-DLSNAIENSGENLPVLEKLS 70 (241)
T ss_dssp EEEEETTEEEEE-GGGC------GGGEE-------EESSCHHHHHHHHHHTTCCCEEEE-EHHHHHHCCCTTHHHHHHGG
T ss_pred EEEeeCCEEEEE-eccc------cccce-------ecCcCHHHHHHHHHHcCCCEEEEe-cccccccCCchhHHHHHHHH
Confidence 379999987732 1111 11111 356789999999999999999876 21 1 1 1356677776
Q ss_pred hhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCC--------------CCHHh
Q psy11600 110 EAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPK--------------TPVDV 170 (277)
Q Consensus 110 ~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~--------------t~~~~ 170 (277)
....|+-+ ..+.++.+.++|||.+.+-..+-.++..+.+. +..|-..-+++.+. ++...
T Consensus 71 -~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e 148 (241)
T 1qo2_A 71 -EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVS 148 (241)
T ss_dssp -GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHH
T ss_pred -hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHH
Confidence 54445543 34567778889999987754300011223344 55552223444431 23333
Q ss_pred HHHHHhh--cCceEEEEecC-C-CCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCc-CcHHHHHHc
Q psy11600 171 IAEYIES--ADLVLIMTVEP-G-FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKC 232 (277)
Q Consensus 171 i~~~i~~--~d~vl~mav~P-g-t~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~-~tv~~~~~~ 232 (277)
+...+.+ ++.+.+..+.. | ..| .. ++.++++++.. ++.+..-|||+- +.+..+.+.
T Consensus 149 ~~~~~~~~G~~~i~~t~~~~~g~~~g--~~---~~~i~~l~~~~-~iPvia~GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 149 LLKRLKEYGLEEIVHTEIEKDGTLQE--HD---FSLTKKIAIEA-EVKVLAAGGISSENSLKTAQKV 209 (241)
T ss_dssp HHHHHHTTTCCEEEEEETTHHHHTCC--CC---HHHHHHHHHHH-TCEEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEeecccccCCc--CC---HHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHhc
Confidence 3333444 45555444322 1 111 11 34445554432 567888999994 888888887
No 138
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.00 E-value=0.38 Score=46.33 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=72.8
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE--ecc
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF--HVE 96 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~--H~e 96 (277)
+..+.++.+.+.|+|.+|+|..-|+- .+-.+.++++|+.+|++++-+. -+ .-.+.++.+.++|+|.+.+ |.-
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~----~~~~~~i~~i~~~~~~~pvi~~-~v-~t~~~a~~l~~aGad~I~vg~~~G 328 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNS----VYQIAMVHYIKQKYPHLQVIGG-NV-VTAAQAKNLIDAGVDGLRVGMGCG 328 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCS----HHHHHHHHHHHHHCTTCEEEEE-EE-CSHHHHHHHHHHTCSEEEECSSCS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcc----hhHHHHHHHHHHhCCCCceEec-cc-chHHHHHHHHHcCCCEEEECCCCC
Confidence 45678888999999999999876532 2345789999998778887653 12 3345688899999999955 111
Q ss_pred CC--------CC-----CHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEee
Q psy11600 97 PV--------DN-----VPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 97 ~~--------d~-----g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H 137 (277)
.. .| ....++++++....|+-. |.+..+.++ +|||.+.+=
T Consensus 329 ~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala-~GAd~V~iG 387 (514)
T 1jcn_A 329 SICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALA-LGASTVMMG 387 (514)
T ss_dssp CCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHH-TTCSEEEES
T ss_pred cccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHH-cCCCeeeEC
Confidence 00 11 123445555544444432 566665555 788888764
No 139
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.85 E-value=0.54 Score=49.12 Aligned_cols=159 Identities=16% Similarity=0.200 Sum_probs=91.5
Q ss_pred HHHHHhcCCCCeeeeeeecc-CcHHh---HHHHHhcCCCeEEEeccCCC-------C---------CHHHHHHHHhhCCC
Q psy11600 55 VKCLRNKIPKAFFETHMMVQ-NPQQW---IEPMADANVDQYTFHVEPVD-------N---------VPQVIRQIKEAGMK 114 (277)
Q Consensus 55 v~~l~~~~~~~~~d~Hlmv~-~p~~~---i~~l~~ag~d~i~~H~e~~d-------~---------g~~~i~~i~~~~~~ 114 (277)
++.+++..|+.++-+-+|.. +++++ ++.+.++|+|.|.+|+..-. | -.++++++|+.+..
T Consensus 625 i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~ 704 (1025)
T 1gte_A 625 VTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQI 704 (1025)
T ss_dssp HHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCC
Confidence 45567656788898988865 56655 55566789999999976311 1 24588889888766
Q ss_pred cccc--------hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEe
Q psy11600 115 VGQV--------LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTV 186 (277)
Q Consensus 115 ~~d~--------p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav 186 (277)
|+.+ ..+.++.+.++|+|.|++.- ++.. ..++.+. +++. +.+...+. +-
T Consensus 705 Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~N----t~~~----------~~~~~~~-~~~~----~~~~~~gr----~~ 761 (1025)
T 1gte_A 705 PFFAKLTPNVTDIVSIARAAKEGGADGVTATN----TVSG----------LMGLKAD-GTPW----PAVGAGKR----TT 761 (1025)
T ss_dssp CEEEEECSCSSCHHHHHHHHHHHTCSEEEECC----CEEE----------CCCBCTT-SCBS----SCBTTTTB----BC
T ss_pred ceEEEeCCChHHHHHHHHHHHHcCCCEEEEec----cccc----------ccccccc-cccc----cccccccc----cc
Confidence 6544 34567888889999998842 1000 0000000 0000 00000000 00
Q ss_pred cCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCC-CcCcHHHHHHccCCC
Q psy11600 187 EPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKCLTGF 236 (277)
Q Consensus 187 ~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV-~~~tv~~~~~~gpg~ 236 (277)
..|.+|....+-.++.+.++++..+++.+...||| +...+.+++.+|++.
T Consensus 762 ~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~ 812 (1025)
T 1gte_A 762 YGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASV 812 (1025)
T ss_dssp CEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSE
T ss_pred CCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCE
Confidence 11222323333334567777766677899999999 446666667788875
No 140
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=93.59 E-value=0.49 Score=43.68 Aligned_cols=119 Identities=14% Similarity=0.157 Sum_probs=75.8
Q ss_pred cHHHHHHHHHHcCCCEEEEecccc----ccc-c---------------CCCCCHHHHHHHHhcCCCCeeeeeeecc----
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDG----TFV-P---------------NLTFGHPVVKCLRNKIPKAFFETHMMVQ---- 74 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg----~fv-p---------------~~~~g~~~v~~l~~~~~~~~~d~Hlmv~---- 74 (277)
.+.+..++++++|.|.+++..--| +|. | ...|-.++++++|+....-++-+-|-..
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~ 241 (364)
T 1vyr_A 162 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 241 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccc
Confidence 455666677889999988765432 221 2 2334567899999986522666533322
Q ss_pred -------Cc---HHhHHHHHhcCCCeEEEeccCC----CCCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEE
Q psy11600 75 -------NP---QQWIEPMADANVDQYTFHVEPV----DNVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYT 135 (277)
Q Consensus 75 -------~p---~~~i~~l~~ag~d~i~~H~e~~----d~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it 135 (277)
++ .+.++.+.++|+|++++|.-.. ......++.+|+....|+-. |++..+.+.+-+||.|.
T Consensus 242 ~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~ 321 (364)
T 1vyr_A 242 NVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVA 321 (364)
T ss_dssp TBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEE
Confidence 11 2237788899999999885321 12467888999987765532 55555555544599998
Q ss_pred ee
Q psy11600 136 FH 137 (277)
Q Consensus 136 ~H 137 (277)
+=
T Consensus 322 ~g 323 (364)
T 1vyr_A 322 FG 323 (364)
T ss_dssp ES
T ss_pred EC
Confidence 83
No 141
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=93.59 E-value=0.61 Score=41.78 Aligned_cols=203 Identities=14% Similarity=0.089 Sum_probs=111.6
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccC-C-CC-------CHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeE
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPN-L-TF-------GHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQY 91 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~-~-~~-------g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i 91 (277)
.++-+..+++|+.. +=+.++ +|. + .+ +|+.|+++++. .++|+-.=..+.+ ..+.+.+.++|+|+|
T Consensus 21 ~eqa~iae~aGa~a--v~~l~~--~p~d~r~~gGv~Rm~dp~~I~~I~~a-VsIPVm~k~righ-~~EAqilea~GaD~I 94 (291)
T 3o07_A 21 PEQAKIAEKSGACA--VMALES--IPADMRKSGKVCRMSDPKMIKDIMNS-VSIPVMAKVRIGH-FVEAQIIEALEVDYI 94 (291)
T ss_dssp HHHHHHHHHHTCSE--EEECSS--CHHHHHTTTCCCCCCCHHHHHHHHTT-CSSCEEEEEETTC-HHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCchh--hhhccC--CCchhhhcCCccccCCHHHHHHHHHh-CCCCeEEEEecCc-HHHHHHHHHcCCCEE
Confidence 35677889999988 444421 111 1 12 49999999986 7999988888877 556778899999998
Q ss_pred EEeccCCCC--CHHHHHHHHhhC-CCcccc-hhhhhHH--HHhcCCCeEEeecCCCC-ChHHHHHHHHHhCCccceeeCC
Q psy11600 92 TFHVEPVDN--VPQVIRQIKEAG-MKVGQV-LQDWIEP--MADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGLAIKP 164 (277)
Q Consensus 92 ~~H~e~~d~--g~~~i~~i~~~~-~~~~d~-p~~~i~~--~~~~g~d~it~H~E~~~-~~~~~~~~I~~~g~~~g~~i~p 164 (277)
|..+. -.+.+..+.++. +.|+-+ -.+.=+. -++.||++|.-.-||++ +..+..+.+|.+. .++.--.
T Consensus 95 ----Desevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~--~~i~~l~ 168 (291)
T 3o07_A 95 ----DESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRIT--EEIKACQ 168 (291)
T ss_dssp ----EEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHH--HHHHHHH
T ss_pred ----ecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHH--HHHHHHH
Confidence 32221 000111111111 112211 1112222 25789999999877554 4444444444321 0000000
Q ss_pred CC-CHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEE--eCCC-CcCcHHHHHHccCCC---C
Q psy11600 165 KT-PVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEV--DGGV-GPNTIDECAKCLTGF---G 237 (277)
Q Consensus 165 ~t-~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~v--dGgV-~~~tv~~~~~~gpg~---g 237 (277)
|. +-+.+..+-+. ..+ -++.|+++++. .++.+.+ .||| +...+..+++.|++. |
T Consensus 169 g~~t~~el~~~a~~--------~~a----------d~elI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVG 229 (291)
T 3o07_A 169 QLKSEDDIAKVAEE--------MRV----------PVSLLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVG 229 (291)
T ss_dssp TCCCHHHHHHHHHH--------HTS----------CHHHHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEEC
T ss_pred cCCCHHHhhhcccc--------cCC----------CHHHHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEc
Confidence 11 00111011000 011 14456666654 3444433 6999 789999999999985 8
Q ss_pred Ccccc-cCHHHHHHHHHh
Q psy11600 238 GQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 238 gq~F~-~~~~~kI~~l~~ 254 (277)
+..|. ++.....+++++
T Consensus 230 rAI~~s~DP~~~Akafv~ 247 (291)
T 3o07_A 230 SGIFKSSNPVRLATAVVE 247 (291)
T ss_dssp GGGGGSSCHHHHHHHHHH
T ss_pred hHHhCCCCHHHHHHHHHH
Confidence 88887 566677776665
No 142
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=93.51 E-value=0.77 Score=39.20 Aligned_cols=106 Identities=12% Similarity=0.095 Sum_probs=54.5
Q ss_pred hHHHHhcCCCeEEe-ecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhh
Q psy11600 123 IEPMADANVDQYTF-HVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMP 201 (277)
Q Consensus 123 i~~~~~~g~d~it~-H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~ 201 (277)
++.+.++|||++.+ |.|-.....++.+ ........++.+++.+.|...
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~---------------------~~~~a~~~Gl~~iv~v~~~~e---------- 123 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEA---------------------VINKCKNLGLETIVCTNNINT---------- 123 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHH---------------------HHHHHHHHTCEEEEEESSSHH----------
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHH---------------------HHHHHHHCCCeEEEEeCCchH----------
Confidence 89999999999999 7651111222222 233456678888888877431
Q ss_pred hHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCC---CC---cccccC-HHHHHHHHHhhCCCCeEEEeCCCCc-cCHH
Q psy11600 202 KVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGF---GG---QKFMQD-MMPKVKWLRENYPTLNIEVDGGVGP-NTID 273 (277)
Q Consensus 202 kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~---gg---q~F~~~-~~~kI~~l~~~~~~~~I~VDGGI~~-~~~~ 273 (277)
.+.+..... ++.- ++|.+ .| +.|.++ ..+-.+.+|+...+..+.+.|||+. +.++
T Consensus 124 -~~~~~~~~~--~~i~--------------~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~ 186 (219)
T 2h6r_A 124 -SKAVAALSP--DCIA--------------VEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVK 186 (219)
T ss_dssp -HHHHTTTCC--SEEE--------------ECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHH
T ss_pred -HHHHHhCCC--CEEE--------------EEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHH
Confidence 233322211 2221 12332 23 566655 3333334444434678999999996 5555
Q ss_pred Hhh
Q psy11600 274 ECA 276 (277)
Q Consensus 274 ~~~ 276 (277)
.+.
T Consensus 187 ~~~ 189 (219)
T 2h6r_A 187 AAL 189 (219)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 143
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.44 E-value=1.8 Score=38.61 Aligned_cols=66 Identities=21% Similarity=0.402 Sum_probs=42.3
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccc-ccc-----ccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeE
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMD-GTF-----VPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQY 91 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimD-g~f-----vp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i 91 (277)
....+-++.|.+.|+++ ++ |.| +|.+.-..+.++.+++. ++.++-+|+ .| .+.++...++|++.+
T Consensus 30 e~k~~i~~~L~~~Gv~~-----IE~g~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~l~--~~-~~~i~~a~~aG~~~v 100 (302)
T 2ftp_A 30 ADKIRLVDDLSAAGLDY-----IEVGSFVSPKWVPQMAGSAEVFAGIRQR-PGVTYAALA--PN-LKGFEAALESGVKEV 100 (302)
T ss_dssp HHHHHHHHHHHHTTCSE-----EEEEECSCTTTCGGGTTHHHHHHHSCCC-TTSEEEEEC--CS-HHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHcCcCE-----EEECCCcCccccccccCHHHHHHHhhhc-CCCEEEEEe--CC-HHHHHHHHhCCcCEE
Confidence 33445566777888776 34 434 34433223456777654 788888887 33 457888899999998
Q ss_pred E
Q psy11600 92 T 92 (277)
Q Consensus 92 ~ 92 (277)
+
T Consensus 101 ~ 101 (302)
T 2ftp_A 101 A 101 (302)
T ss_dssp E
T ss_pred E
Confidence 4
No 144
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=93.22 E-value=0.29 Score=42.13 Aligned_cols=115 Identities=13% Similarity=0.114 Sum_probs=73.9
Q ss_pred cHHHHHHHHHHcCCCEEEE-eccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccC
Q psy11600 19 NLHSESQNLLDSGADYLHL-DVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEP 97 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~-DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~ 97 (277)
+..+.++.+++.|+|++|+ |. ++.+. ......+.++++++. .++|+-+.=.+.++ +.++.+.++|+|.+++--..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~-~~~~~-~~~~~~~~i~~i~~~-~~iPvi~~Ggi~~~-~~~~~~~~~Gad~V~lg~~~ 107 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDI-SATHE-ERAILLDVVARVAER-VFIPLTVGGGVRSL-EDARKLLLSGADKVSVNSAA 107 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEEC-CSSTT-CHHHHHHHHHHHHTT-CCSCEEEESSCCSH-HHHHHHHHHTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcC-Ccccc-CccccHHHHHHHHHh-CCCCEEEECCcCCH-HHHHHHHHcCCCEEEEChHH
Confidence 5667788889999999887 33 22221 111234668999986 68888887666665 46777788899999433222
Q ss_pred CCCCHHHHHHHHhhCC-----Ccccc---------------------hhhhhHHHHhcCCCeEEeec
Q psy11600 98 VDNVPQVIRQIKEAGM-----KVGQV---------------------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 98 ~d~g~~~i~~i~~~~~-----~~~d~---------------------p~~~i~~~~~~g~d~it~H~ 138 (277)
.. .|..++.+++... ..+++ +.++++.+.++|++.+.+|.
T Consensus 108 l~-~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~ 173 (252)
T 1ka9_F 108 VR-RPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTS 173 (252)
T ss_dssp HH-CTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEE
T ss_pred Hh-CcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEec
Confidence 22 3455655544321 12222 35677888889999999884
No 145
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=93.12 E-value=0.36 Score=44.61 Aligned_cols=117 Identities=18% Similarity=0.205 Sum_probs=72.7
Q ss_pred cHHHHHHHHHHcCCCEEEEecccc----ccc-cC---------------CCCCHHHHHHHHhcCCCCeeeeeeecc----
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDG----TFV-PN---------------LTFGHPVVKCLRNKIPKAFFETHMMVQ---- 74 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg----~fv-p~---------------~~~g~~~v~~l~~~~~~~~~d~Hlmv~---- 74 (277)
.+.+..+++.++|.|.+++..--| +|. |+ ..|-.++++++|+....-++-+-|-..
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~ 241 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLN 241 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccC
Confidence 455666677889999988765332 111 21 224457789999876422565533331
Q ss_pred -----Cc----HHhHHHHHhcCCCeEEEeccCCC----CCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcC-CCeEE
Q psy11600 75 -----NP----QQWIEPMADANVDQYTFHVEPVD----NVPQVIRQIKEAGMKVGQV-----LQDWIEPMADAN-VDQYT 135 (277)
Q Consensus 75 -----~p----~~~i~~l~~ag~d~i~~H~e~~d----~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g-~d~it 135 (277)
+. .+.++.+.++|+|++++|.-..+ ....+++.+|+....|+-. |++. ..+.+.| ||.|.
T Consensus 242 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~a-~~~l~~g~aD~V~ 320 (365)
T 2gou_A 242 GTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGRYNAEKA-EQAINDGLADMIG 320 (365)
T ss_dssp SCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSCCHHHH-HHHHHTTSCSEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCCCCHHHH-HHHHHCCCcceeh
Confidence 11 22377888999999988853221 1357788999987665432 5544 4445555 99888
Q ss_pred e
Q psy11600 136 F 136 (277)
Q Consensus 136 ~ 136 (277)
+
T Consensus 321 i 321 (365)
T 2gou_A 321 F 321 (365)
T ss_dssp C
T ss_pred h
Confidence 7
No 146
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=93.11 E-value=0.75 Score=40.45 Aligned_cols=170 Identities=10% Similarity=0.122 Sum_probs=104.2
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCC--CCCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCC--ChH
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPV--DNVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVD--NVP 145 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~--d~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~--~~~ 145 (277)
+|.+..+.+.++ +.-+.+--|.. .|+...++++|+.+..|+.. +...+.+...+|||.|.+-.-.-. .+.
T Consensus 62 ~~~~iA~~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~ 140 (251)
T 1i4n_A 62 SLEDFIRMYDEL-ADAISILTEKHYFKGDPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIK 140 (251)
T ss_dssp CHHHHHHHHHHH-CSEEEEECCCSSSCCCTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHH
T ss_pred CHHHHHHHHHHh-CCceEEEecccccCCCHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHH
Confidence 566778888887 99998876653 45889999999998777643 445677799999999998764100 122
Q ss_pred HHHHHHHHhCCccceeeCCCC-CHHhHHHHHhhcCceEEEEecC-CCCCchhhhhhhhhHHHHHhhCCC-ccEEEeCCCC
Q psy11600 146 QVIRQIKEAGMKVGLAIKPKT-PVDVIAEYIESADLVLIMTVEP-GFGGQKFMQDMMPKVKWLRENYPT-LNIEVDGGVG 222 (277)
Q Consensus 146 ~~~~~I~~~g~~~g~~i~p~t-~~~~i~~~i~~~d~vl~mav~P-gt~gq~~~~~~l~kI~~l~~~~~~-~~i~vdGgV~ 222 (277)
.+++..++.|+. .-..+ ..+++...+...+.- ++.+|+ +. +.|-.+ ++...++.+..|. .-+.--|||+
T Consensus 141 ~l~~~a~~lGl~----~lvEv~~~eE~~~A~~l~g~~-iIGinnr~l--~t~~~d-~~~~~~l~~~ip~~~~vIaEsGI~ 212 (251)
T 1i4n_A 141 EIYEAAEELGMD----SLVEVHSREDLEKVFSVIRPK-IIGINTRDL--DTFEIK-KNVLWELLPLVPDDTVVVAESGIK 212 (251)
T ss_dssp HHHHHHHTTTCE----EEEEECSHHHHHHHHTTCCCS-EEEEECBCT--TTCCBC-TTHHHHHGGGSCTTSEEEEESCCC
T ss_pred HHHHHHHHcCCe----EEEEeCCHHHHHHHHhcCCCC-EEEEeCccc--ccCCCC-HHHHHHHHHhCCCCCEEEEeCCCC
Confidence 344444444433 22221 233444333320221 234454 32 122222 4445556555553 5555699996
Q ss_pred -cCcHHHHHHccCCC---CCcccc-cCHHHHHHHHHh
Q psy11600 223 -PNTIDECAKCLTGF---GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 223 -~~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~ 254 (277)
.+.+..+.++ ++. |+.... ++..+.+++|..
T Consensus 213 t~edv~~~~~~-a~avLVG~aimr~~d~~~~~~~l~~ 248 (251)
T 1i4n_A 213 DPRELKDLRGK-VNAVLVGTSIMKAENPRRFLEEMRA 248 (251)
T ss_dssp CGGGHHHHTTT-CSEEEECHHHHHCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHh
Confidence 8999999888 774 666665 477888877764
No 147
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.11 E-value=0.66 Score=44.65 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=51.7
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
+..+.++.+.++|+|.+++|...|+.- .-.+.++++|+.+|++++-+. .+.++ +..+.+.++|+|.+.+
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g~~~----~~~~~i~~ir~~~p~~~Vi~g-~v~t~-e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHGHSE----GVLQRIRETRAAYPHLEIIGG-NVATA-EGARALIEAGVSAVKV 299 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCTTSH----HHHHHHHHHHHHCTTCCEEEE-EECSH-HHHHHHHHHTCSEEEE
T ss_pred chHHHHHHHHhccCceEEeccccccch----HHHHHHHHHHHHCCCceEEEc-ccCcH-HHHHHHHHhCCCEEEE
Confidence 335667788889999999999876442 335889999999888887662 23333 5678899999999964
No 148
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=93.03 E-value=0.69 Score=39.85 Aligned_cols=70 Identities=13% Similarity=0.075 Sum_probs=42.6
Q ss_pred eeeeeeeccCcHH---hHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcc----cc-hhhhhHHHHhcCCCeEEe
Q psy11600 66 FFETHMMVQNPQQ---WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG----QV-LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 66 ~~d~Hlmv~~p~~---~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~----d~-p~~~i~~~~~~g~d~it~ 136 (277)
++-.=+-..++++ ..+.+.+.|++.+-+-+.. ..+.+.|+++++.....+ .+ -.+-++..+++||+++--
T Consensus 14 ~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t-~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs 91 (217)
T 3lab_A 14 PLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRT-EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS 91 (217)
T ss_dssp SEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTS-TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCC-ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe
Confidence 3444344445554 4777888899988665443 457788888887653321 11 345566677777776643
No 149
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=92.95 E-value=2.6 Score=36.67 Aligned_cols=34 Identities=12% Similarity=-0.014 Sum_probs=25.7
Q ss_pred cCHHHHHHHHHhhC-CCCeEEEeCCCCccCHHHhh
Q psy11600 243 QDMMPKVKWLRENY-PTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 243 ~~~~~kI~~l~~~~-~~~~I~VDGGI~~~~~~~~~ 276 (277)
+-.++.++++++.. .++.+.+.||||++|+.++.
T Consensus 175 ~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~ 209 (243)
T 3o63_A 175 APGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVL 209 (243)
T ss_dssp CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHH
T ss_pred hhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHH
Confidence 34577888887753 36779999999999998875
No 150
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=92.92 E-value=0.6 Score=43.11 Aligned_cols=214 Identities=14% Similarity=0.095 Sum_probs=117.3
Q ss_pred eeccccCcc-cHHHHHHHHHHcCCCEEEEe-----cccc-----------ccccCCCC---CH-HHHHHHHhc--CCCCe
Q psy11600 10 PSILNSDLS-NLHSESQNLLDSGADYLHLD-----VMDG-----------TFVPNLTF---GH-PVVKCLRNK--IPKAF 66 (277)
Q Consensus 10 ~s~~~~d~~-~l~~~~~~l~~~~~~~~h~D-----imDg-----------~fvp~~~~---g~-~~v~~l~~~--~~~~~ 66 (277)
|=++++=+. .=.+.++.+...|.-.+=+= =-.| .+++.+.| |. .+++.+++. +++.|
T Consensus 49 Pv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~p 128 (354)
T 4ef8_A 49 PFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQHDYGKKP 128 (354)
T ss_dssp SEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHTCCTTTCC
T ss_pred CCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHHHHHhhcCCCc
Confidence 444444444 34567777777776553110 0012 12333444 43 345556542 46788
Q ss_pred eeeeeeccCcHHhHH---HHH---hcCCCeEEEeccCC--CC----------CHHHHHHHHhhCCCcccc---h------
Q psy11600 67 FETHMMVQNPQQWIE---PMA---DANVDQYTFHVEPV--DN----------VPQVIRQIKEAGMKVGQV---L------ 119 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~---~l~---~ag~d~i~~H~e~~--d~----------g~~~i~~i~~~~~~~~d~---p------ 119 (277)
+-+-++-.+|++|.+ .+. ++|+|++.+.+-+- .+ -.++++++|+.+..|+.+ |
T Consensus 129 vivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~ 208 (354)
T 4ef8_A 129 LFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAH 208 (354)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHH
T ss_pred EEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHH
Confidence 999998889998844 344 46899998776521 11 345788888888777654 2
Q ss_pred -hhhhHHHHhcC-CCeEEeecCCCCChHHHHHHHHHhCCccceeeCC--CCCHHhHHHHHhhcCceEEEEecCCCCCchh
Q psy11600 120 -QDWIEPMADAN-VDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKP--KTPVDVIAEYIESADLVLIMTVEPGFGGQKF 195 (277)
Q Consensus 120 -~~~i~~~~~~g-~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p--~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~ 195 (277)
.+.++.+.++| +|.|+.+- ++. .|+.+.. .++. +..... .-|.+|...
T Consensus 209 ~~~~a~~~~~~Gg~d~I~~~N----T~~------------~g~~idi~~~~~~------~~~~~~------~gGlSG~~i 260 (354)
T 4ef8_A 209 FDAAAEILNEFPKVQFITCIN----SIG------------NGLVIDAETESVV------IKPKQG------FGGLGGRYV 260 (354)
T ss_dssp HHHHHHHHHTCTTEEEEEECC----CEE------------EEECEETTTTEES------CSGGGG------EEEEEGGGG
T ss_pred HHHHHHHHHhCCCccEEEEec----ccC------------cceeeeccCCccc------cccccc------cCCCCCCCC
Confidence 23344555777 88888652 110 0111110 0000 000000 012334334
Q ss_pred hhhhhhhHHHHHhhCCCccEEEeCCCC-cCcHHHHHHccCCC---CCcccc--cCHHHHHHH
Q psy11600 196 MQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKCLTGF---GGQKFM--QDMMPKVKW 251 (277)
Q Consensus 196 ~~~~l~kI~~l~~~~~~~~i~vdGgV~-~~tv~~~~~~gpg~---ggq~F~--~~~~~kI~~ 251 (277)
-+-.++.+.++++..+++.+...|||. .+.+.++..+|++. |...+. +...++|++
T Consensus 261 ~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~~ 322 (354)
T 4ef8_A 261 LPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTS 322 (354)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHH
T ss_pred chHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHHH
Confidence 455567788888776689999999995 45555667778875 443332 556666653
No 151
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=92.67 E-value=0.38 Score=42.22 Aligned_cols=115 Identities=10% Similarity=0.057 Sum_probs=69.8
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccC
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEP 97 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~ 97 (277)
.+..+..+..++.|++++|+ +-|-.|. .=....++.+|+. .++|+.+-=.+.++.+ +....++|||.+++-...
T Consensus 65 ~~p~~~A~~~~~~GA~~isv-lt~~~~f---~G~~~~l~~i~~~-v~lPvl~kdfI~d~~q-i~~a~~~GAD~VlL~~~~ 138 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSV-LTEPHRF---GGSLLDLKRVREA-VDLPLLRKDFVVDPFM-LEEARAFGASAALLIVAL 138 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEE-ECCCSSS---CCCHHHHHHHHHH-CCSCEEEESCCCSHHH-HHHHHHTTCSEEEEEHHH
T ss_pred CCHHHHHHHHHHcCCCEEEE-ecchhhh---ccCHHHHHHHHHh-cCCCEEECCcCCCHHH-HHHHHHcCCCEEEECccc
Confidence 56778888889999999999 3332332 1256789999986 7899887777777764 677889999999443222
Q ss_pred CC-CCHHHHHHHHhhCCCc-ccc-hhhhhHHHHhcCCCeEEeec
Q psy11600 98 VD-NVPQVIRQIKEAGMKV-GQV-LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 98 ~d-~g~~~i~~i~~~~~~~-~d~-p~~~i~~~~~~g~d~it~H~ 138 (277)
.+ .-..+++..+..+..+ +++ -+.-+....++|++++.++.
T Consensus 139 l~~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~ 182 (254)
T 1vc4_A 139 LGELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINN 182 (254)
T ss_dssp HGGGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEES
T ss_pred hHHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEcc
Confidence 22 1122222222333322 112 11223455666777777764
No 152
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.66 E-value=1 Score=38.41 Aligned_cols=100 Identities=9% Similarity=0.052 Sum_probs=65.5
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN 100 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~ 100 (277)
.++++...+.|+|++| .|+ +.++.++.-++. +.++-.. +.+|.+. ....++|+|++-+|....-+
T Consensus 78 ~d~~~~A~~aGAd~v~--------~p~--~d~~v~~~~~~~--g~~~i~G--~~t~~e~-~~A~~~Gad~v~~Fpa~~~g 142 (214)
T 1wbh_A 78 PQQLAEVTEAGAQFAI--------SPG--LTEPLLKAATEG--TIPLIPG--ISTVSEL-MLGMDYGLKEFKFFPAEANG 142 (214)
T ss_dssp HHHHHHHHHHTCSCEE--------ESS--CCHHHHHHHHHS--SSCEEEE--ESSHHHH-HHHHHTTCCEEEETTTTTTT
T ss_pred HHHHHHHHHcCCCEEE--------cCC--CCHHHHHHHHHh--CCCEEEe--cCCHHHH-HHHHHCCCCEEEEecCcccc
Confidence 4788888899999998 343 445666665653 4444444 5667664 55678899999997633335
Q ss_pred CHHHHHHHHhhC-CCcccc----hhhhhHHHHhc-CCCeEE
Q psy11600 101 VPQVIRQIKEAG-MKVGQV----LQDWIEPMADA-NVDQYT 135 (277)
Q Consensus 101 g~~~i~~i~~~~-~~~~d~----p~~~i~~~~~~-g~d~it 135 (277)
|+..+++++... ..|+-. -.+-++.+.++ |++.+.
T Consensus 143 G~~~lk~i~~~~~~ipvvaiGGI~~~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 143 GVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIG 183 (214)
T ss_dssp HHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBSCEE
T ss_pred CHHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcCCCeEEE
Confidence 799999998876 444422 23455556666 666665
No 153
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=92.56 E-value=0.75 Score=41.18 Aligned_cols=27 Identities=26% Similarity=0.395 Sum_probs=24.4
Q ss_pred CCCccEEEeCCCCcCcHHHHHHccCCC
Q psy11600 210 YPTLNIEVDGGVGPNTIDECAKCLTGF 236 (277)
Q Consensus 210 ~~~~~i~vdGgV~~~tv~~~~~~gpg~ 236 (277)
.+++.+++-|||+++|++++.+.|+++
T Consensus 239 ~~~v~ieaSGGIt~~~i~~~a~tGVD~ 265 (284)
T 1qpo_A 239 APTVMLESSGGLSLQTAATYAETGVDY 265 (284)
T ss_dssp CTTCEEEEESSCCTTTHHHHHHTTCSE
T ss_pred CCCeEEEEECCCCHHHHHHHHhcCCCE
Confidence 456789999999999999999999997
No 154
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=92.54 E-value=2.9 Score=36.94 Aligned_cols=78 Identities=13% Similarity=0.102 Sum_probs=49.9
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhhCCCcccc---hhhhhHHHHhc--CCCeEE-eecCCCCC
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEAGMKVGQV---LQDWIEPMADA--NVDQYT-FHVEPVDN 143 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~--g~d~it-~H~E~~~~ 143 (277)
...++.+++.+.|||+|-+-.+.... -.++|+.+++.+..|+.+ -.+.++.-.++ |+++|- +-.+ .
T Consensus 35 ~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~Ga~iINdvs~~---~ 111 (271)
T 2yci_X 35 PIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHRGHAMINSTSAD---Q 111 (271)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCCSCCEEEEECSC---H
T ss_pred HHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCCCCCEEEECCCC---c
Confidence 35556778889999999777666321 556778888776666544 34556666666 998885 6544 2
Q ss_pred h--HHHHHHHHHhC
Q psy11600 144 V--PQVIRQIKEAG 155 (277)
Q Consensus 144 ~--~~~~~~I~~~g 155 (277)
- +...+.+++.|
T Consensus 112 d~~~~~~~~~a~~~ 125 (271)
T 2yci_X 112 WKMDIFFPMAKKYE 125 (271)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHcC
Confidence 1 34555555543
No 155
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=92.39 E-value=1.4 Score=40.66 Aligned_cols=68 Identities=22% Similarity=0.344 Sum_probs=40.7
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHH-----HHHHHHhcCCCCeeee--eeeccC----------------
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHP-----VVKCLRNKIPKAFFET--HMMVQN---------------- 75 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~-----~v~~l~~~~~~~~~d~--Hlmv~~---------------- 75 (277)
.+.++++.|.++|++++.+|= |.++.+++ .++.++....+++... |+=-.|
T Consensus 172 a~~~ei~~l~~aG~~~IQiDe------P~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHiC~G~~~~~n~d~~~t~~~~~ 245 (357)
T 3rpd_A 172 ILNEEAKELEAAGVDIIQFDE------PAFNVFFDEVNDWGIACLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSEW 245 (357)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC------GGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEECSCCSSHHHHHHHTTSCSCC
T ss_pred HHHHHHHHHHHcCCCEEEecC------ccccccHHHHHHHHHHHHHHHHhCCCCceEEEEecCCccCCcccccccccccc
Confidence 356888889999999999984 33333433 2445554444444444 654331
Q ss_pred --cHHhHHHHHhcCCCeEE
Q psy11600 76 --PQQWIEPMADANVDQYT 92 (277)
Q Consensus 76 --p~~~i~~l~~ag~d~i~ 92 (277)
....++.+.+.++|.++
T Consensus 246 g~y~~i~~~l~~~~~D~i~ 264 (357)
T 3rpd_A 246 RQYEEVFPKLQKSNIDIIS 264 (357)
T ss_dssp CGGGGTHHHHHHSSCCEEE
T ss_pred CcHHHHHHHHHhCCCCEEE
Confidence 13346666667777773
No 156
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=92.36 E-value=0.46 Score=44.14 Aligned_cols=119 Identities=10% Similarity=0.047 Sum_probs=73.3
Q ss_pred cHHHHHHHHHHcCCCEEEEecccc----ccc-c---------------CCCCCHHHHHHHHhcCCCCeeeeeeeccC---
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDG----TFV-P---------------NLTFGHPVVKCLRNKIPKAFFETHMMVQN--- 75 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg----~fv-p---------------~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~--- 75 (277)
.+.+..++++++|.|.+++..--| +|. | ...|-.++++++|+....-++-+-|-..+
T Consensus 167 ~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~ 246 (377)
T 2r14_A 167 DYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF 246 (377)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 455666677889999977765432 111 1 22244678999998765226666553321
Q ss_pred ----------cHHhHHHHHhcCCCeEEEeccCCC----C-CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEE
Q psy11600 76 ----------PQQWIEPMADANVDQYTFHVEPVD----N-VPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYT 135 (277)
Q Consensus 76 ----------p~~~i~~l~~ag~d~i~~H~e~~d----~-g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it 135 (277)
..+.++.+.++|+|++++|.-... + ...+++.+|+....|+-. |++..+.+.+-+||.|.
T Consensus 247 ~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ 326 (377)
T 2r14_A 247 GLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVA 326 (377)
T ss_dssp TCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEe
Confidence 223478888999999998853211 1 245688888887665422 55554444444499988
Q ss_pred ee
Q psy11600 136 FH 137 (277)
Q Consensus 136 ~H 137 (277)
|=
T Consensus 327 ig 328 (377)
T 2r14_A 327 FG 328 (377)
T ss_dssp ES
T ss_pred ec
Confidence 83
No 157
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=92.34 E-value=0.59 Score=42.85 Aligned_cols=76 Identities=17% Similarity=0.220 Sum_probs=54.4
Q ss_pred CCeeeeeeeccCcHHh---HHHHHhcCCCeEEEeccCC------CC-----------CHHHHHHHHhhCCCcccc-----
Q psy11600 64 KAFFETHMMVQNPQQW---IEPMADANVDQYTFHVEPV------DN-----------VPQVIRQIKEAGMKVGQV----- 118 (277)
Q Consensus 64 ~~~~d~Hlmv~~p~~~---i~~l~~ag~d~i~~H~e~~------d~-----------g~~~i~~i~~~~~~~~d~----- 118 (277)
+.++-+.|+..+|+.+ .+.+.++|+|.|-+|.-.- ++ ..++++++++....|+.+
T Consensus 57 ~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g 136 (350)
T 3b0p_A 57 EHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLG 136 (350)
T ss_dssp GCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESC
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecC
Confidence 5789999998888876 4455678999999996421 11 345778888766555433
Q ss_pred ---------hhhhhHHHHhcCCCeEEeecC
Q psy11600 119 ---------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 119 ---------p~~~i~~~~~~g~d~it~H~E 139 (277)
..++++.+.++|+|.|++|.-
T Consensus 137 ~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 137 LEGKETYRGLAQSVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp BTTCCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred cCccccHHHHHHHHHHHHHcCCCEEEEecC
Confidence 245678888999999999853
No 158
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=92.29 E-value=2.5 Score=38.30 Aligned_cols=70 Identities=20% Similarity=0.183 Sum_probs=42.3
Q ss_pred CCCeeeeeeeccCcHH---hHHHHHhcCCCeEEEeccCC-CCC----------------HHHHHHHHhhCCCcccc---h
Q psy11600 63 PKAFFETHMMVQNPQQ---WIEPMADANVDQYTFHVEPV-DNV----------------PQVIRQIKEAGMKVGQV---L 119 (277)
Q Consensus 63 ~~~~~d~Hlmv~~p~~---~i~~l~~ag~d~i~~H~e~~-d~g----------------~~~i~~i~~~~~~~~d~---p 119 (277)
|+-+.| ...+++. ..+++.+.|||+|=+=.|+. .|. .++|+++++....|+.+ -
T Consensus 38 pDSFsd---~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~ 114 (314)
T 3tr9_A 38 PNSFYH---PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSR 114 (314)
T ss_dssp TTCSBC---BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSC
T ss_pred CCchhh---ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCC
Confidence 566777 3334443 57777889999993333432 222 24667777766555544 3
Q ss_pred hhhhHHHHhcCCCeEE
Q psy11600 120 QDWIEPMADANVDQYT 135 (277)
Q Consensus 120 ~~~i~~~~~~g~d~it 135 (277)
.+.++.-.++|+++|-
T Consensus 115 ~~Va~aAl~aGa~iIN 130 (314)
T 3tr9_A 115 PRVMREAVNTGADMIN 130 (314)
T ss_dssp HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 4566666677888764
No 159
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=92.22 E-value=1.5 Score=39.77 Aligned_cols=108 Identities=14% Similarity=0.163 Sum_probs=69.6
Q ss_pred HHHHHHHHcC--CCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE--eccC
Q psy11600 22 SESQNLLDSG--ADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF--HVEP 97 (277)
Q Consensus 22 ~~~~~l~~~~--~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~--H~e~ 97 (277)
+..+.+.+.| ++++++|..-| +.....+.++++|+.++..++-.. .+.++ +..+.+.++|+|.|.+ |.-.
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G----~~~~~~~~i~~lr~~~~~~~vi~G-~v~s~-e~A~~a~~aGad~Ivvs~hgG~ 182 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHG----HSNAVINMIQHIKKHLPESFVIAG-NVGTP-EAVRELENAGADATKVGIGPGK 182 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSC----CSHHHHHHHHHHHHHCTTSEEEEE-EECSH-HHHHHHHHHTCSEEEECSSCST
T ss_pred HHHHHHHhcCCCCCEEEEECCCC----CcHHHHHHHHHHHHhCCCCEEEEC-CcCCH-HHHHHHHHcCCCEEEEecCCCc
Confidence 4466777888 99988887433 122345789999998655555543 23444 5788899999999977 4321
Q ss_pred -CC------C-----CHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEe
Q psy11600 98 -VD------N-----VPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 98 -~d------~-----g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~ 136 (277)
.+ . ....+.++++....|+-. +.+.++.++ +|||.+.+
T Consensus 183 ~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kala-lGAdaV~i 238 (336)
T 1ypf_A 183 VCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIR-FGATMVMI 238 (336)
T ss_dssp TCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHH-TTCSEEEE
T ss_pred eeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHH-cCCCEEEe
Confidence 00 0 145566666665444432 777777775 68887766
No 160
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=92.22 E-value=2 Score=39.03 Aligned_cols=64 Identities=8% Similarity=0.005 Sum_probs=40.1
Q ss_pred HHH-HHHHcCCCEEEEeccc-cccccCCCCCHHHHHHHHh------cCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEe
Q psy11600 23 ESQ-NLLDSGADYLHLDVMD-GTFVPNLTFGHPVVKCLRN------KIPKAFFETHMMVQNPQQWIEPMADANVDQYTFH 94 (277)
Q Consensus 23 ~~~-~l~~~~~~~~h~DimD-g~fvp~~~~g~~~v~~l~~------~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H 94 (277)
-++ .|.+.|+++ ++ |.|+.+ ....+.++++++ ..++..+.+. +.+.. .++...++|++.+++-
T Consensus 46 i~~~~L~~~Gv~~-----IE~g~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~i~~l--~~~~~-~i~~a~~~g~~~v~i~ 116 (337)
T 3ble_A 46 IAKFLLQKLNVDR-----VEIASARVS-KGELETVQKIMEWAATEQLTERIEILGF--VDGNK-TVDWIKDSGAKVLNLL 116 (337)
T ss_dssp HHHHHHHTTCCSE-----EEEEETTSC-TTHHHHHHHHHHHHHHTTCGGGEEEEEE--SSTTH-HHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHcCCCE-----EEEeCCCCC-hhHHHHHHHHHhhhhhhccCCCCeEEEE--ccchh-hHHHHHHCCCCEEEEE
Confidence 344 666777776 34 666531 112278999987 4555555543 33333 7888999999999654
Q ss_pred c
Q psy11600 95 V 95 (277)
Q Consensus 95 ~ 95 (277)
.
T Consensus 117 ~ 117 (337)
T 3ble_A 117 T 117 (337)
T ss_dssp E
T ss_pred E
Confidence 4
No 161
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=92.16 E-value=0.94 Score=39.53 Aligned_cols=172 Identities=16% Similarity=0.222 Sum_probs=90.7
Q ss_pred eeeeccCcHH-----hHHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhhCCCcccchhhhh-HHHHhcCCCeEEee
Q psy11600 69 THMMVQNPQQ-----WIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEAGMKVGQVLQDWI-EPMADANVDQYTFH 137 (277)
Q Consensus 69 ~Hlmv~~p~~-----~i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~~~~~~d~p~~~i-~~~~~~g~d~it~H 137 (277)
.|++..+|.. .++.+.++|+|.+-+=. ..| ..++++++|+ +..|+-. .-|. ..+ .+|+|.+.+.
T Consensus 10 ~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~--S~Gvt~~~~~~~v~~ir~-~~~Pivl-m~y~~n~i-~~G~dg~iiP 84 (240)
T 1viz_A 10 KHVFKLDPNKDLPDEQLEILCESGTDAVIIGG--SDGVTEDNVLRMMSKVRR-FLVPCVL-EVSAIEAI-VPGFDLYFIP 84 (240)
T ss_dssp CEEEEECTTSCCCHHHHHHHHTSCCSEEEECC------CHHHHHHHHHHHTT-SSSCEEE-ECSCGGGC-CSCCSEEEEE
T ss_pred eEEEeeCCCccccHHHHHHHHHcCCCEEEECC--CCCCCHHHHHHHHHHhhC-cCCCEEE-ecCccccc-cCCCCEEEEc
Confidence 4667777644 57889999999884332 333 6677888887 5444432 1112 222 6788866654
Q ss_pred cCCCCChHHH-----HHHHHHhC-----Cccce----eeCCCCC------------HHhHHHHHhhc-----CceEEEEe
Q psy11600 138 VEPVDNVPQV-----IRQIKEAG-----MKVGL----AIKPKTP------------VDVIAEYIESA-----DLVLIMTV 186 (277)
Q Consensus 138 ~E~~~~~~~~-----~~~I~~~g-----~~~g~----~i~p~t~------------~~~i~~~i~~~-----d~vl~mav 186 (277)
-=|.+.-... ...+++.| ...=- -++|++. .+.+..+.... +++-..+
T Consensus 85 dLp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s- 163 (240)
T 1viz_A 85 SVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY- 163 (240)
T ss_dssp EETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC-
T ss_pred ccCcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeC-
Confidence 2111111222 35566544 22111 2344433 33444444333 4554444
Q ss_pred cCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCc-CcHHHHHHccCCC---CCcccc-cC-HHHHHHHHHh
Q psy11600 187 EPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKCLTGF---GGQKFM-QD-MMPKVKWLRE 254 (277)
Q Consensus 187 ~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~-~tv~~~~~~gpg~---ggq~F~-~~-~~~kI~~l~~ 254 (277)
-|+++ ..+.++++++...++-+.+=|||+- ++++++.+ |++. |+.... ++ .+++++..++
T Consensus 164 -~G~~~------~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~~~~~~~~v~~~~~ 229 (240)
T 1viz_A 164 -SGVLG------DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYEDFDRALKTVAAVKG 229 (240)
T ss_dssp -TTSCC------CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHCHHHHHTHHHHHHC
T ss_pred -CCccC------hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhCHHHHHHHHHHHHh
Confidence 24432 3455666666654678999999974 56666666 7774 554443 23 4455555443
No 162
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=92.16 E-value=0.4 Score=43.03 Aligned_cols=27 Identities=19% Similarity=0.310 Sum_probs=23.8
Q ss_pred CCCccEEEeCCCCcCcHHHHHHccCCC
Q psy11600 210 YPTLNIEVDGGVGPNTIDECAKCLTGF 236 (277)
Q Consensus 210 ~~~~~i~vdGgV~~~tv~~~~~~gpg~ 236 (277)
.+++.+++-|||+++|+.++.+.|+++
T Consensus 238 ~~~v~ieASGGIt~eni~~~a~tGVD~ 264 (285)
T 1o4u_A 238 NPNVIVEVSGGITEENVSLYDFETVDV 264 (285)
T ss_dssp CTTSEEEEEECCCTTTGGGGCCTTCCE
T ss_pred CCCceEEEECCCCHHHHHHHHHcCCCE
Confidence 345678999999999999999999997
No 163
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=92.16 E-value=0.98 Score=40.83 Aligned_cols=88 Identities=9% Similarity=0.107 Sum_probs=53.5
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccC----CCCCHHHHHHHHhcCCCCeeeeeeecc-CcHHhHHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPN----LTFGHPVVKCLRNKIPKAFFETHMMVQ-NPQQWIEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~----~~~g~~~v~~l~~~~~~~~~d~Hlmv~-~p~~~i~~l~~ag~d 89 (277)
.+...+.++++.+.+.|+..+++ ..|.. |. ...=.++++.+++.+ ++ .+++-.. -..+.++.+.++|++
T Consensus 91 ls~eei~~~~~~~~~~G~~~i~l--~gGe~-p~~~~~~~~~~~l~~~ik~~~-~i--~i~~s~g~~~~e~l~~L~~aG~~ 164 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGFHMVDL--TMGED-PYYYEDPNRFVELVQIVKEEL-GL--PIMISPGLMDNATLLKAREKGAN 164 (350)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEE--EECCC-HHHHHSTHHHHHHHHHHHHHH-CS--CEEEECSSCCHHHHHHHHHTTEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEE--eeCCC-CccccCHHHHHHHHHHHHhhc-Cc--eEEEeCCCCCHHHHHHHHHcCCC
Confidence 34556667777777889998776 44442 22 111257788888653 33 3343332 245578999999999
Q ss_pred eEEEeccCCCCCHHHHHHHHh
Q psy11600 90 QYTFHVEPVDNVPQVIRQIKE 110 (277)
Q Consensus 90 ~i~~H~e~~d~g~~~i~~i~~ 110 (277)
.+.+-+|+. .+.+.+.+++
T Consensus 165 ~i~i~lEt~--~~~~~~~i~~ 183 (350)
T 3t7v_A 165 FLALYQETY--DTELYRKLRV 183 (350)
T ss_dssp EEECCCBCS--CHHHHHHHST
T ss_pred EEEEeeecC--CHHHHHHhCC
Confidence 985444443 4666666654
No 164
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=92.11 E-value=0.49 Score=40.83 Aligned_cols=99 Identities=9% Similarity=0.017 Sum_probs=64.3
Q ss_pred HHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCC
Q psy11600 22 SESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNV 101 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g 101 (277)
++++...+.|+|++| .|+ +.++.++.-++. +.++-.. +.+|.+ +....++|+|++-||....-+|
T Consensus 89 d~~~~A~~aGAd~v~--------~p~--~d~~v~~~~~~~--g~~~i~G--~~t~~e-~~~A~~~Gad~vk~FPa~~~~G 153 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVV--------TPG--ITEDILEAGVDS--EIPLLPG--ISTPSE-IMMGYALGYRRFKLFPAEISGG 153 (225)
T ss_dssp HHHHHHHHHTCSSEE--------CSS--CCHHHHHHHHHC--SSCEECE--ECSHHH-HHHHHTTTCCEEEETTHHHHTH
T ss_pred HHHHHHHHCCCCEEE--------eCC--CCHHHHHHHHHh--CCCEEEe--eCCHHH-HHHHHHCCCCEEEEccCccccC
Confidence 678888889999998 354 445666665543 4444444 667855 5566789999998865222347
Q ss_pred HHHHHHHHhhC-CCcccc----hhhhhHHHHh-cCCCeEE
Q psy11600 102 PQVIRQIKEAG-MKVGQV----LQDWIEPMAD-ANVDQYT 135 (277)
Q Consensus 102 ~~~i~~i~~~~-~~~~d~----p~~~i~~~~~-~g~d~it 135 (277)
+..+++++... ..|+-. -.+-++++.+ .|++.+.
T Consensus 154 ~~~lk~i~~~~~~ipvvaiGGI~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 154 VAAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCVG 193 (225)
T ss_dssp HHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHHSTTBCCEE
T ss_pred HHHHHHHHhhCCCCeEEEECCCCHHHHHHHHhccCCEEEE
Confidence 88999998865 444422 2334555555 5777776
No 165
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=92.10 E-value=0.78 Score=41.73 Aligned_cols=117 Identities=11% Similarity=0.141 Sum_probs=74.7
Q ss_pred cHHHHHHHHHHcCCCEEEEecccc----cc-ccC---------------CCCCHHHHHHHHhcCCCCeeeeeeecc----
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDG----TF-VPN---------------LTFGHPVVKCLRNKIPKAFFETHMMVQ---- 74 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg----~f-vp~---------------~~~g~~~v~~l~~~~~~~~~d~Hlmv~---- 74 (277)
.+.+..+++.++|.|.+-+..--| +| .|+ ..|-.++++++|+.. +.++-+-|-..
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~ 223 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTD 223 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCST
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCC
Confidence 455667778889999944433222 11 132 123378899999986 77777776542
Q ss_pred ------CcHHhHHHHHhcCCCeEEEeccCC-----C-C---CHHHHHHHHhhCCCcccc------hhhhhHHHHhcC-CC
Q psy11600 75 ------NPQQWIEPMADANVDQYTFHVEPV-----D-N---VPQVIRQIKEAGMKVGQV------LQDWIEPMADAN-VD 132 (277)
Q Consensus 75 ------~p~~~i~~l~~ag~d~i~~H~e~~-----d-~---g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g-~d 132 (277)
+..+.++.+.++|+|++++|.-.. . + ...+++.+|+....|+-. |++ ++.+.+.| ||
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~-a~~~l~~G~aD 302 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSM-AEEILQNGRAD 302 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHH-HHHHHHTTSCS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHH-HHHHHHcCCce
Confidence 234467888899999998874210 1 1 357888999887665533 444 44555566 99
Q ss_pred eEEee
Q psy11600 133 QYTFH 137 (277)
Q Consensus 133 ~it~H 137 (277)
.|.|=
T Consensus 303 ~V~iG 307 (338)
T 1z41_A 303 LIFIG 307 (338)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 98883
No 166
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=92.09 E-value=2.7 Score=38.12 Aligned_cols=83 Identities=12% Similarity=0.083 Sum_probs=58.0
Q ss_pred HHHHHHhcCCCCeeeeeeec-cCcHHhHHHHHhcCCCeEEEeccCCC------------CCHHHHHHHHhhCCCcccc--
Q psy11600 54 VVKCLRNKIPKAFFETHMMV-QNPQQWIEPMADANVDQYTFHVEPVD------------NVPQVIRQIKEAGMKVGQV-- 118 (277)
Q Consensus 54 ~v~~l~~~~~~~~~d~Hlmv-~~p~~~i~~l~~ag~d~i~~H~e~~d------------~g~~~i~~i~~~~~~~~d~-- 118 (277)
+.+-+++.-++.|+-+.+.. .++....+.+..+|+|.+.+|..... +-.+.|+++|+....|+-+
T Consensus 106 ~~~~~~~~~~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~ 185 (349)
T 1p0k_A 106 SYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKE 185 (349)
T ss_dssp HHHHHHHHCSSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEE
T ss_pred ceehhhhhCCCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEe
Confidence 33434544468888888873 46666666777889999999987421 1246788998877665432
Q ss_pred -----hhhhhHHHHhcCCCeEEe
Q psy11600 119 -----LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 -----p~~~i~~~~~~g~d~it~ 136 (277)
-.+.+..+.++|+|.|++
T Consensus 186 ~~~~~~~~~a~~a~~~Gad~I~v 208 (349)
T 1p0k_A 186 VGFGMSKASAGKLYEAGAAAVDI 208 (349)
T ss_dssp ESSCCCHHHHHHHHHHTCSEEEE
T ss_pred cCCCCCHHHHHHHHHcCCCEEEE
Confidence 245678889999999998
No 167
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.08 E-value=1 Score=38.68 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=65.7
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN 100 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~ 100 (277)
.++++...+.|+|++|. |+ +.++.++.-|+. +.++-+. +.+|.+. ....+.|+|++-|+....-+
T Consensus 79 ~d~~~~A~~aGAd~v~~--------p~--~d~~v~~~ar~~--g~~~i~G--v~t~~e~-~~A~~~Gad~vk~Fpa~~~g 143 (224)
T 1vhc_A 79 AEQVVLAKSSGADFVVT--------PG--LNPKIVKLCQDL--NFPITPG--VNNPMAI-EIALEMGISAVKFFPAEASG 143 (224)
T ss_dssp HHHHHHHHHHTCSEEEC--------SS--CCHHHHHHHHHT--TCCEECE--ECSHHHH-HHHHHTTCCEEEETTTTTTT
T ss_pred HHHHHHHHHCCCCEEEE--------CC--CCHHHHHHHHHh--CCCEEec--cCCHHHH-HHHHHCCCCEEEEeeCcccc
Confidence 47888888899999863 43 446677777763 3444444 5677664 55678899999997632335
Q ss_pred CHHHHHHHHhhC-CCcccc----hhhhhHHHHhc-CCCeEE
Q psy11600 101 VPQVIRQIKEAG-MKVGQV----LQDWIEPMADA-NVDQYT 135 (277)
Q Consensus 101 g~~~i~~i~~~~-~~~~d~----p~~~i~~~~~~-g~d~it 135 (277)
|+..+++++... ..|+-. -.+-++++.++ |++.+.
T Consensus 144 G~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~ 184 (224)
T 1vhc_A 144 GVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACG 184 (224)
T ss_dssp HHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEE
T ss_pred CHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEE
Confidence 799999999876 445432 23445555555 666655
No 168
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=91.99 E-value=0.38 Score=43.40 Aligned_cols=126 Identities=14% Similarity=0.212 Sum_probs=81.1
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEecccc-------------ccccCCCCCHHHHHHHHhcCCCCeeeeeeec
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDG-------------TFVPNLTFGHPVVKCLRNKIPKAFFETHMMV 73 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg-------------~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv 73 (277)
.+...|+..|...+.+..+++++. .|. +||-=| .+..+..|-.++++++|+. .+.|+.+-+-.
T Consensus 60 ~~~~QL~g~~~~~~~~aa~~a~~~-~d~--Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~vKir~ 135 (318)
T 1vhn_A 60 NVAVQIFGSEPNELSEAARILSEK-YKW--IDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKS-VSGKFSVKTRL 135 (318)
T ss_dssp TEEEEEECSCHHHHHHHHHHHTTT-CSE--EEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHH-CSSEEEEEEES
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHh-CCE--EEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHh-hCCCEEEEecC
Confidence 466677766778888888888887 887 555311 1222333445778899987 45777766533
Q ss_pred ----cCcHHhHHHHHhcCCCeEEEeccCC-C---C--CHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEee
Q psy11600 74 ----QNPQQWIEPMADANVDQYTFHVEPV-D---N--VPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 74 ----~~p~~~i~~l~~ag~d~i~~H~e~~-d---~--g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H 137 (277)
.+..+.++.+.++|+|++++|--.. + + ..+.++++++ ..|+-. +++..+.+.+.|||.|.+-
T Consensus 136 G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 136 GWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVA 213 (318)
T ss_dssp CSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEES
T ss_pred CCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEEC
Confidence 2344679999999999999994321 1 1 2234555555 333321 7777777777889888875
Q ss_pred c
Q psy11600 138 V 138 (277)
Q Consensus 138 ~ 138 (277)
-
T Consensus 214 R 214 (318)
T 1vhn_A 214 R 214 (318)
T ss_dssp G
T ss_pred H
Confidence 3
No 169
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=91.76 E-value=0.66 Score=41.90 Aligned_cols=27 Identities=26% Similarity=0.219 Sum_probs=24.3
Q ss_pred CCCccEEEeCCCCcCcHHHHHHccCCC
Q psy11600 210 YPTLNIEVDGGVGPNTIDECAKCLTGF 236 (277)
Q Consensus 210 ~~~~~i~vdGgV~~~tv~~~~~~gpg~ 236 (277)
.+++.+++-|||+++|+.++.+.|+++
T Consensus 251 ~~~v~ieaSGGI~~~~i~~~a~tGVD~ 277 (298)
T 3gnn_A 251 EGRAVLEVSGGVNFDTVRAIAETGVDR 277 (298)
T ss_dssp TTSEEEEEESSCSTTTHHHHHHTTCSE
T ss_pred CCCCeEEEEcCCCHHHHHHHHHcCCCE
Confidence 356789999999999999999999996
No 170
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=91.59 E-value=0.23 Score=44.19 Aligned_cols=74 Identities=18% Similarity=0.276 Sum_probs=47.1
Q ss_pred hhhHHHHHhhCCC-ccEEEeCCCCcCcHHH---HHHccCCC-CCcccccCHHHHHH-HHHhhCCCCeEEEeCCCCccCHH
Q psy11600 200 MPKVKWLRENYPT-LNIEVDGGVGPNTIDE---CAKCLTGF-GGQKFMQDMMPKVK-WLRENYPTLNIEVDGGVGPNTID 273 (277)
Q Consensus 200 l~kI~~l~~~~~~-~~i~vdGgV~~~tv~~---~~~~gpg~-ggq~F~~~~~~kI~-~l~~~~~~~~I~VDGGI~~~~~~ 273 (277)
.+-++.+++..+. ..+.+ ...|.++ ..++|+++ .-..|.++.++++. .++...|+..|++-||||++|++
T Consensus 169 ~~ai~~~r~~~~~~~~i~v----ev~tlee~~~A~~aGaD~I~ld~~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~ 244 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEI----ECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYRDAHYPFVLLEASGNISLESIN 244 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEE----EESSHHHHHHHHHHTCSEEEEETCCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHH
T ss_pred HHHHHHHHHhCCCCceEEE----EcCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHH
Confidence 4557777777764 34443 3445444 45678886 22335555454433 34445678899999999999999
Q ss_pred HhhC
Q psy11600 274 ECAK 277 (277)
Q Consensus 274 ~~~~ 277 (277)
.+++
T Consensus 245 ~~~~ 248 (273)
T 2b7n_A 245 AYAK 248 (273)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8764
No 171
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=91.54 E-value=0.38 Score=43.73 Aligned_cols=94 Identities=15% Similarity=0.065 Sum_probs=68.8
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEecccc--ccccCCCCCHHHHHHHHhc--CCCCeeeeeeeccCcHHhHHH-HH
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMDG--TFVPNLTFGHPVVKCLRNK--IPKAFFETHMMVQNPQQWIEP-MA 84 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg--~fvp~~~~g~~~v~~l~~~--~~~~~~d~Hlmv~~p~~~i~~-l~ 84 (277)
+=++++|..+.++.++.+++.+ ++ +++.-- .|. ..||++.+++|++. .+++++-.+++..|..+.+.. +.
T Consensus 85 ~LiVALD~~~~~~al~l~~~l~-~~--v~~vKvG~~l~--~~~G~~~v~~L~~~a~~~g~~IflDlK~~DIpnTv~~a~~ 159 (312)
T 3g3d_A 85 NLCLSADVSLARELLQLADALG-PS--ICMLKTHVDIL--NDFTLDVMKELITLAKCHEFLIFEDRKFADIGNTVKKQYE 159 (312)
T ss_dssp CEEEECCCSCHHHHHHHHHHHG-GG--CSEEEECGGGC--TTCCHHHHHHHHHHHHHHTCEEEEEEEECSCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHhC-CC--ceEEEEcHHHH--HHhCHHHHHHHHHHHhhCCCEEEEECcccccHHHHHHHHH
Confidence 3467889999999998888763 33 455552 233 35899999999862 258899999999999888764 32
Q ss_pred ------hcCCCeEEEeccCCCCCHHHHHHHHhh
Q psy11600 85 ------DANVDQYTFHVEPVDNVPQVIRQIKEA 111 (277)
Q Consensus 85 ------~ag~d~i~~H~e~~d~g~~~i~~i~~~ 111 (277)
..++|++|+|. -+|...+++.++.
T Consensus 160 ~a~~~~a~~aD~vTVHa---~~G~~~m~aa~e~ 189 (312)
T 3g3d_A 160 GGIFKIASWADLVNAHV---VPGSGVVKGLQEV 189 (312)
T ss_dssp CTTTCHHHHCSEEEEES---TTCTHHHHHHHHH
T ss_pred HHHHhhhccCCEEEEcc---CCCHHHHHHHHHh
Confidence 13699999995 4567788877664
No 172
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=91.37 E-value=0.83 Score=39.13 Aligned_cols=64 Identities=6% Similarity=0.095 Sum_probs=46.4
Q ss_pred cCcHHhHHHHHhcCCCeEEEeccCC-CCCHHHHHHHHh-hCCC------cccch---hhhhHHHHhcCCCeEEeecC
Q psy11600 74 QNPQQWIEPMADANVDQYTFHVEPV-DNVPQVIRQIKE-AGMK------VGQVL---QDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 74 ~~p~~~i~~l~~ag~d~i~~H~e~~-d~g~~~i~~i~~-~~~~------~~d~p---~~~i~~~~~~g~d~it~H~E 139 (277)
....+.++++.. .++++=++.+.. ..|+..++.+++ .... .+|.| ..+.+.+.+. +|++|+|.-
T Consensus 11 ~~al~l~~~l~~-~v~~~KvG~~l~~~~G~~~v~~L~~~~g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~~ 85 (215)
T 3ve9_A 11 PIPEETLRKLNG-KVAGIKVGWPLLLNLGKEKVKELVGLVDGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHAF 85 (215)
T ss_dssp CCCHHHHHHHHT-TSSEEEEEHHHHHHHCHHHHHHHHTTCCSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEGG
T ss_pred HHHHHHHHHhCC-cCcEEEecHHHHHhhCHHHHHHHHHhcCCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeCC
Confidence 666777777754 467887787653 459999999998 3322 23556 4466888999 999999975
No 173
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=91.35 E-value=0.85 Score=41.73 Aligned_cols=117 Identities=13% Similarity=0.173 Sum_probs=72.0
Q ss_pred HHHHHHHHHHcCCCEEEEeccccc----cc-cCC-----CCC----------HHHHHHHHhcCC-CCeeeeeeecc----
Q psy11600 20 LHSESQNLLDSGADYLHLDVMDGT----FV-PNL-----TFG----------HPVVKCLRNKIP-KAFFETHMMVQ---- 74 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~DimDg~----fv-p~~-----~~g----------~~~v~~l~~~~~-~~~~d~Hlmv~---- 74 (277)
+.+..++++++|.|.+-+..--|- |. |+. .|| .++++++|+..+ +.++-+-|-..
T Consensus 154 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~ 233 (349)
T 3hgj_A 154 FVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGE 233 (349)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCST
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccC
Confidence 445556678899999444443321 11 221 133 689999999864 66666655432
Q ss_pred ------CcHHhHHHHHhcCCCeEEEecc---CC------C-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcC-C
Q psy11600 75 ------NPQQWIEPMADANVDQYTFHVE---PV------D-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADAN-V 131 (277)
Q Consensus 75 ------~p~~~i~~l~~ag~d~i~~H~e---~~------d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g-~ 131 (277)
+..+.++.+.++|+|++++|.- .. . ....+++.+|+....|+-. |+ -++.+.+.| |
T Consensus 234 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e-~a~~~l~~G~a 312 (349)
T 3hgj_A 234 GGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPE-QAETLLQAGSA 312 (349)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHH-HHHHHHHTTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHH-HHHHHHHCCCc
Confidence 2334578888999999988841 10 1 1456788888876655432 43 345555666 8
Q ss_pred CeEEee
Q psy11600 132 DQYTFH 137 (277)
Q Consensus 132 d~it~H 137 (277)
|.|.|=
T Consensus 313 D~V~iG 318 (349)
T 3hgj_A 313 DLVLLG 318 (349)
T ss_dssp SEEEES
T ss_pred eEEEec
Confidence 988884
No 174
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=91.18 E-value=0.24 Score=44.44 Aligned_cols=73 Identities=21% Similarity=0.228 Sum_probs=45.4
Q ss_pred hhHHHHHhhCC--CccEEEeCCCCcCcHHHHHHccCCC-CCcccccCHHH-HHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 201 PKVKWLRENYP--TLNIEVDGGVGPNTIDECAKCLTGF-GGQKFMQDMMP-KVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 201 ~kI~~l~~~~~--~~~i~vdGgV~~~tv~~~~~~gpg~-ggq~F~~~~~~-kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
+-++.++++.+ .+.++++ +.+-+.+..++|+++ ---.|.++.++ -++.++...++..|++-||||++|++.++
T Consensus 183 ~av~~ar~~~~~~~I~Vev~---t~eea~eal~aGaD~I~LDn~~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a 259 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEVEVD---SLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYA 259 (284)
T ss_dssp HHHHHHHHHCTTSCEEEEES---SHHHHHHHGGGCCSEEEEETCCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHH
T ss_pred HHHHHHHHhCCCCCEEEEeC---CHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHH
Confidence 34666777777 3444443 334444456677775 22334444333 34445555567899999999999999875
No 175
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=90.89 E-value=3.7 Score=34.81 Aligned_cols=52 Identities=15% Similarity=0.140 Sum_probs=36.7
Q ss_pred CCceEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHH
Q psy11600 4 VQCMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLR 59 (277)
Q Consensus 4 ~~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~ 59 (277)
.+++|+-|.++.-...+++.++.+.+.|.+. +.+...++ | ..+.+..++++|
T Consensus 16 ~~~klg~~~~~~~~~~~~~~l~~~~~~G~~~--vEl~~~~~-~-~~~~~~~~~~~~ 67 (257)
T 3lmz_A 16 NPFHLGMAGYTFVNFDLDTTLKTLERLDIHY--LCIKDFHL-P-LNSTDEQIRAFH 67 (257)
T ss_dssp CSSEEEECGGGGTTSCHHHHHHHHHHTTCCE--EEECTTTS-C-TTCCHHHHHHHH
T ss_pred CceEEEEEEEeecCCCHHHHHHHHHHhCCCE--EEEecccC-C-CCCCHHHHHHHH
Confidence 3578888888888789999999999999999 55554443 2 234454444444
No 176
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=90.88 E-value=0.94 Score=40.89 Aligned_cols=125 Identities=13% Similarity=0.092 Sum_probs=74.7
Q ss_pred eEeeeccccC-------cccHHHHHHHHHHcCCCEEEEeccccccccCC---------CCCHHHHHHHHhcC--------
Q psy11600 7 MIGPSILNSD-------LSNLHSESQNLLDSGADYLHLDVMDGTFVPNL---------TFGHPVVKCLRNKI-------- 62 (277)
Q Consensus 7 ~~~~s~~~~d-------~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~---------~~g~~~v~~l~~~~-------- 62 (277)
.+++|+...+ ..++.+..+++.+ |+|.+-+.+. .||. .+-.++++++|+..
T Consensus 135 ~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~----sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g 209 (336)
T 1f76_A 135 VLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINIS----SPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHH 209 (336)
T ss_dssp EEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECC----CSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEcc----CCCCCCcccccCHHHHHHHHHHHHHHHHhhhhccc
Confidence 4677877655 4456666666655 7787433321 3432 12247888888763
Q ss_pred CCCeeeeeeecc----CcHHhHHHHHhcCCCeEEEeccC-------------CCC---C-------HHHHHHHHhhC--C
Q psy11600 63 PKAFFETHMMVQ----NPQQWIEPMADANVDQYTFHVEP-------------VDN---V-------PQVIRQIKEAG--M 113 (277)
Q Consensus 63 ~~~~~d~Hlmv~----~p~~~i~~l~~ag~d~i~~H~e~-------------~d~---g-------~~~i~~i~~~~--~ 113 (277)
+++|+-+=+-.. +..+..+.+.++|+|.|++|--. ..+ | ...++++++.. .
T Consensus 210 ~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ 289 (336)
T 1f76_A 210 KYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGR 289 (336)
T ss_dssp SCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTS
T ss_pred ccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCC
Confidence 267877754322 12334788889999999887321 011 2 25677777765 4
Q ss_pred Ccccc------hhhhhHHHHhcCCCeEEee
Q psy11600 114 KVGQV------LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 114 ~~~d~------p~~~i~~~~~~g~d~it~H 137 (277)
.|+-. +++..+.+. +|||.|.+-
T Consensus 290 ipVi~~GGI~~~~da~~~l~-~GAd~V~ig 318 (336)
T 1f76_A 290 LPIIGVGGIDSVIAAREKIA-AGASLVQIY 318 (336)
T ss_dssp SCEEEESSCCSHHHHHHHHH-HTCSEEEES
T ss_pred CCEEEECCCCCHHHHHHHHH-CCCCEEEee
Confidence 44422 666666654 789988773
No 177
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=90.81 E-value=2.3 Score=41.04 Aligned_cols=119 Identities=17% Similarity=0.103 Sum_probs=75.8
Q ss_pred ccCcccHHHHHHHHHHcCCCE--EEEec---------ccccc------------------------c---cCCCCCHHHH
Q psy11600 14 NSDLSNLHSESQNLLDSGADY--LHLDV---------MDGTF------------------------V---PNLTFGHPVV 55 (277)
Q Consensus 14 ~~d~~~l~~~~~~l~~~~~~~--~h~Di---------mDg~f------------------------v---p~~~~g~~~v 55 (277)
..|..-+.+.++++++.|++. +|+|. +-..| + .+-.+..+.|
T Consensus 256 ~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i 335 (511)
T 1kbi_A 256 NSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDI 335 (511)
T ss_dssp CSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHH
Confidence 556677888899999999995 67772 10000 0 0112456889
Q ss_pred HHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE--eccC-CCC---CHHHHHHHHhhC-------CCcccc----
Q psy11600 56 KCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF--HVEP-VDN---VPQVIRQIKEAG-------MKVGQV---- 118 (277)
Q Consensus 56 ~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~--H~e~-~d~---g~~~i~~i~~~~-------~~~~d~---- 118 (277)
+++|+. +++|+-+-. +.++ +....+.++|+|.|++ |--. .++ ....+.++++.. ..++-.
T Consensus 336 ~~lr~~-~~~PvivKg-v~~~-e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI 412 (511)
T 1kbi_A 336 EELKKK-TKLPIVIKG-VQRT-EDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGV 412 (511)
T ss_dssp HHHHHH-CSSCEEEEE-ECSH-HHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSC
T ss_pred HHHHHH-hCCcEEEEe-CCCH-HHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCC
Confidence 999986 688888763 3454 5578889999999988 4221 122 223444444432 223322
Q ss_pred --hhhhhHHHHhcCCCeEEe
Q psy11600 119 --LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 --p~~~i~~~~~~g~d~it~ 136 (277)
+.+.++.++ +|||.|.+
T Consensus 413 ~~g~Dv~kaLa-lGAdaV~i 431 (511)
T 1kbi_A 413 RRGTDVLKALC-LGAKGVGL 431 (511)
T ss_dssp CSHHHHHHHHH-HTCSEEEE
T ss_pred CCHHHHHHHHH-cCCCEEEE
Confidence 788888887 79998887
No 178
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=90.76 E-value=0.76 Score=41.25 Aligned_cols=79 Identities=15% Similarity=0.054 Sum_probs=56.3
Q ss_pred HHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhC--CCcccc----hhhhhHH
Q psy11600 52 HPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAG--MKVGQV----LQDWIEP 125 (277)
Q Consensus 52 ~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~--~~~~d~----p~~~i~~ 125 (277)
...++..|+..|..++.| -|.++ ++++...++|+|+| -+|.+ .+..++++.+.. ...+.+ -.+-+..
T Consensus 186 ~~Av~~ar~~~~~~~IeV--Ev~tl-~ea~eAl~aGaD~I--~LDn~--~~~~l~~av~~~~~~v~ieaSGGIt~~~i~~ 258 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEV--EVTNL-DELNQAIAAKADIV--MLDNF--SGEDIDIAVSIARGKVALEVSGNIDRNSIVA 258 (287)
T ss_dssp HHHHHHHHHHCTTSCEEE--EESSH-HHHHHHHHTTCSEE--EEESC--CHHHHHHHHHHHTTTCEEEEESSCCTTTHHH
T ss_pred HHHHHHHHhhCCCCcEEE--EeCCH-HHHHHHHHcCCCEE--EEcCC--CHHHHHHHHHhhcCCceEEEECCCCHHHHHH
Confidence 367888888767777776 67777 56667778999999 55544 466666655543 223333 6778899
Q ss_pred HHhcCCCeEEee
Q psy11600 126 MADANVDQYTFH 137 (277)
Q Consensus 126 ~~~~g~d~it~H 137 (277)
+++.|+|+|++-
T Consensus 259 ~a~tGVD~IsvG 270 (287)
T 3tqv_A 259 IAKTGVDFISVG 270 (287)
T ss_dssp HHTTTCSEEECS
T ss_pred HHHcCCCEEEEC
Confidence 999999999983
No 179
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=90.54 E-value=4.6 Score=34.70 Aligned_cols=107 Identities=9% Similarity=-0.022 Sum_probs=72.1
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeee---------eeccCcHHhHHHHHhcC
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETH---------MMVQNPQQWIEPMADAN 87 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~H---------lmv~~p~~~i~~l~~ag 87 (277)
.....+-.+.+++.|+..+-+ =+++.++++|+. +++|+-.- +++..-.++++.+.++|
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~------------~~~~~i~~ir~~-v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~G 101 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVAVRI------------EGIDNLRMTRSL-VSVPIIGIIKRDLDESPVRITPFLDDVDALAQAG 101 (232)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE------------ESHHHHHHHHTT-CCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHCCCeEEEE------------CCHHHHHHHHHh-cCCCEEEEEeecCCCcceEeCccHHHHHHHHHcC
Confidence 445667777788899998654 147889999986 88887310 23333345788899999
Q ss_pred CCeEEEeccCC---CCCHHHHHHHHhhCCC-cccc-hhhhhHHHHhcCCCeEEe
Q psy11600 88 VDQYTFHVEPV---DNVPQVIRQIKEAGMK-VGQV-LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 88 ~d~i~~H~e~~---d~g~~~i~~i~~~~~~-~~d~-p~~~i~~~~~~g~d~it~ 136 (277)
+|.+.+..-.. ..-.++++.+++.... ..++ ..+.+....++|+|+|.+
T Consensus 102 ad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 102 AAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp CSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEEC
T ss_pred CCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEE
Confidence 99995432211 1245677888776443 2233 566778888999999964
No 180
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=90.35 E-value=1.5 Score=40.59 Aligned_cols=114 Identities=16% Similarity=0.134 Sum_probs=71.6
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEecc
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVE 96 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e 96 (277)
.....+.++++.+.|+|.+-+|.--|... .-.+.++++|+.+|++++-+- -+..++ ..+.+.++|+|.|.+=..
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~G~~~----~~~e~I~~ir~~~~~~~Vi~G-~V~T~e-~A~~a~~aGaD~I~Vg~g 171 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAHAHAK----YVGKTLKSLRQLLGSRCIMAG-NVATYA-GADYLASCGADIIKAGIG 171 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSCCSSH----HHHHHHHHHHHHHTTCEEEEE-EECSHH-HHHHHHHTTCSEEEECCS
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCCCCcH----hHHHHHHHHHHhcCCCeEEEc-CcCCHH-HHHHHHHcCCCEEEEcCC
Confidence 34556788999999999998887665311 114689999998778777762 134554 567889999999965211
Q ss_pred CCC--------C-CHHHHHHHHhhCCC--cccc------hhhhhHHHHhcCCCeEEee
Q psy11600 97 PVD--------N-VPQVIRQIKEAGMK--VGQV------LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 97 ~~d--------~-g~~~i~~i~~~~~~--~~d~------p~~~i~~~~~~g~d~it~H 137 (277)
... + +...+..+++.... |+-. +.+..+.++ +|||.+.+-
T Consensus 172 ~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIAdGGI~~~~di~kALa-~GAd~V~iG 228 (361)
T 3r2g_A 172 GGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIKTSGDIVKALA-FGADFVMIG 228 (361)
T ss_dssp SSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEEESCCCSHHHHHHHHH-TTCSEEEES
T ss_pred CCcCccccccCCccHHHHHHHHHHHHhCCCEEEECCCCCHHHHHHHHH-cCCCEEEEC
Confidence 100 0 11245555554432 3322 666666655 788887763
No 181
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=90.22 E-value=0.77 Score=38.82 Aligned_cols=116 Identities=12% Similarity=0.217 Sum_probs=74.4
Q ss_pred ccccCcccHHHHHHHHHHcCCC-EEEEeccccccccCCCCCHHHHHHHHhc-CCCCeeeee-----------------ee
Q psy11600 12 ILNSDLSNLHSESQNLLDSGAD-YLHLDVMDGTFVPNLTFGHPVVKCLRNK-IPKAFFETH-----------------MM 72 (277)
Q Consensus 12 ~~~~d~~~l~~~~~~l~~~~~~-~~h~DimDg~fvp~~~~g~~~v~~l~~~-~~~~~~d~H-----------------lm 72 (277)
++..|..++.+.++++.+.|=. .+|+|..+|- +-....+..|++. -|+--+..+ +.
T Consensus 35 ll~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gl-----s~d~~ai~fL~~~~~pdGIIsTk~~~i~~Ak~~gL~tIqR~F 109 (192)
T 3kts_A 35 MLETHVAQLKALVKYAQAGGKKVLLHADLVNGL-----KNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLF 109 (192)
T ss_dssp ECSEETTTHHHHHHHHHHTTCEEEEEGGGEETC-----CCSHHHHHHHHHTTCCSEEEESCHHHHHHHHHTTCEEEEEEE
T ss_pred EecCcHHHHHHHHHHHHHcCCeEEEecCchhcc-----CCcHHHHHHHHhCCCCCEEEeCcHHHHHHHHHCCCeEEEEEE
Confidence 4667889999999999988643 3799998872 2223334444431 133222222 22
Q ss_pred ccCc---HHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEe
Q psy11600 73 VQNP---QQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 73 v~~p---~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~ 136 (277)
+-|- ..-++.+.+...|.+ |.+.| .|++|+++++.+..|+-+ -.+-+....++||+.||-
T Consensus 110 liDS~al~~~~~~i~~~~PD~i----EiLPGi~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsT 178 (192)
T 3kts_A 110 MIDSSAYNKGVALIQKVQPDCI----ELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTT 178 (192)
T ss_dssp CCSHHHHHHHHHHHHHHCCSEE----EEECTTCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEE
T ss_pred EEEcchHHHHHHHHhhcCCCEE----EECCchhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEe
Confidence 2232 234666666677766 55555 688999999988777755 466677778889988886
No 182
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=90.12 E-value=3.6 Score=35.32 Aligned_cols=107 Identities=11% Similarity=0.085 Sum_probs=72.7
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeee---------eeccCcHHhHHHHHhcC
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETH---------MMVQNPQQWIEPMADAN 87 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~H---------lmv~~p~~~i~~l~~ag 87 (277)
...+.+..+.+++.|+..+-+ =+++.++++|+. +++|+-.- +++..-.++++.+.++|
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~------------~~~~~i~~ir~~-v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aG 101 (229)
T 3q58_A 35 PEIVAAMAQAAASAGAVAVRI------------EGIENLRTVRPH-LSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAG 101 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE------------ESHHHHHHHGGG-CCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHCCCcEEEE------------CCHHHHHHHHHh-cCCCEEEEEeecCCCCceEeCccHHHHHHHHHcC
Confidence 445667777788999999654 157889999986 88886421 23333345788899999
Q ss_pred CCeEEEeccCC---CCCHHHHHHHHhhCCC-cccc-hhhhhHHHHhcCCCeEEe
Q psy11600 88 VDQYTFHVEPV---DNVPQVIRQIKEAGMK-VGQV-LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 88 ~d~i~~H~e~~---d~g~~~i~~i~~~~~~-~~d~-p~~~i~~~~~~g~d~it~ 136 (277)
+|.+.+..-.. ..-.++++.+++.... ..++ ..+......++|+|+|.+
T Consensus 102 ad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 102 ADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp CSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEEC
T ss_pred CCEEEECccccCChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEe
Confidence 99994432211 1245778888876443 2233 566778888999999964
No 183
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=90.12 E-value=3.4 Score=38.06 Aligned_cols=118 Identities=9% Similarity=-0.001 Sum_probs=75.8
Q ss_pred cCcccHHHHHHHHHHcCCCEE--EEecc---------cccc-cc--------------------------CCCCCHHHHH
Q psy11600 15 SDLSNLHSESQNLLDSGADYL--HLDVM---------DGTF-VP--------------------------NLTFGHPVVK 56 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~--h~Dim---------Dg~f-vp--------------------------~~~~g~~~v~ 56 (277)
.|.....+.++++++.|++.+ |+|.- ...| .| +-.+..+.|+
T Consensus 143 ~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~ 222 (368)
T 2nli_A 143 KDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIE 222 (368)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHH
Confidence 466677788999999998864 55520 0011 11 2345678899
Q ss_pred HHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEec--c-CCCCC---HHHHHHHHhhC--CCcccc------hhhh
Q psy11600 57 CLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHV--E-PVDNV---PQVIRQIKEAG--MKVGQV------LQDW 122 (277)
Q Consensus 57 ~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~--e-~~d~g---~~~i~~i~~~~--~~~~d~------p~~~ 122 (277)
++|+. +++|+-+-. +. ..+..+.+.++|+|.|.++- - ..+++ ...+.++++.. ..++-. +.+.
T Consensus 223 ~lr~~-~~~PvivK~-v~-~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~ 299 (368)
T 2nli_A 223 EIAGH-SGLPVFVKG-IQ-HPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHV 299 (368)
T ss_dssp HHHHH-SSSCEEEEE-EC-SHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHH
T ss_pred HHHHH-cCCCEEEEc-CC-CHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHH
Confidence 99986 678887763 33 34567889999999998832 1 22333 34555565543 233322 7888
Q ss_pred hHHHHhcCCCeEEe
Q psy11600 123 IEPMADANVDQYTF 136 (277)
Q Consensus 123 i~~~~~~g~d~it~ 136 (277)
++.++ +|||.+.+
T Consensus 300 ~kala-lGAd~V~i 312 (368)
T 2nli_A 300 AKALA-SGADVVAL 312 (368)
T ss_dssp HHHHH-TTCSEEEE
T ss_pred HHHHH-cCCCEEEE
Confidence 88887 89998887
No 184
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=90.04 E-value=2.9 Score=36.05 Aligned_cols=97 Identities=15% Similarity=0.146 Sum_probs=65.9
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCc--ccc-hhhhhH
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKV--GQV-LQDWIE 124 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~--~d~-p~~~i~ 124 (277)
.+|.++.++.+|+..|+++.-. +....+.+..+.+...|++.++.++... .+.+++.+++.+..+ ..+ -...+.
T Consensus 149 ~SF~~~~l~~~~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~v~~~~~~G~~v~~WTvn~~~~~~ 225 (252)
T 3qvq_A 149 SSFNYFALVSAKALWPEIARGY-NVSAIPSAWQERLEHLDCAGLHIHQSFF--DVQQVSDIKAAGYKVLAFTINDESLAL 225 (252)
T ss_dssp EESCHHHHHHHHHHCTTSCEEE-ECSSCCTTHHHHHHHHTCSEEEEEGGGC--CHHHHHHHHHTTCEEEEECCCCHHHHH
T ss_pred EeCCHHHHHHHHHHCCCCcEEE-EEecCchhHHHHHHHcCCeEEecchhhC--CHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 4689999999999888876432 3333355566666778999997666544 478999998887653 333 234567
Q ss_pred HHHhcCCCeEEeecCCCCChHHHHHHHH
Q psy11600 125 PMADANVDQYTFHVEPVDNVPQVIRQIK 152 (277)
Q Consensus 125 ~~~~~g~d~it~H~E~~~~~~~~~~~I~ 152 (277)
.+.+.|+|.|+=- .+..+.+.++
T Consensus 226 ~l~~~GVdgIiTD-----~P~~~~~~l~ 248 (252)
T 3qvq_A 226 KLYNQGLDAVFSD-----YPQKIQSAID 248 (252)
T ss_dssp HHHHTTCCEEEES-----SHHHHHHHHH
T ss_pred HHHHcCCCEEEeC-----CHHHHHHHHH
Confidence 8889999988752 3444444444
No 185
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=89.96 E-value=3 Score=40.63 Aligned_cols=114 Identities=13% Similarity=0.235 Sum_probs=68.0
Q ss_pred HHHHHHHHcCCCEEEEeccc-cccccCCCC----CHHHHHHHHhcCCCCeeeeeeeccC-------c----HHhHHHHHh
Q psy11600 22 SESQNLLDSGADYLHLDVMD-GTFVPNLTF----GHPVVKCLRNKIPKAFFETHMMVQN-------P----QQWIEPMAD 85 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~DimD-g~fvp~~~~----g~~~v~~l~~~~~~~~~d~Hlmv~~-------p----~~~i~~l~~ 85 (277)
+-++.|.+.|+++ +.+-= +.|..++.| ..+.++.+++..|+..+-+.+-..| | ...++...+
T Consensus 51 ~Ia~~L~~~Gv~~--IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~ 128 (539)
T 1rqb_A 51 GACADIDAAGYWS--VECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAE 128 (539)
T ss_dssp GGHHHHHHTTCSE--EEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCE--EEeCcccccccchhccCCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHHh
Confidence 3455566678877 44321 124332222 2467888888778887776552222 2 345788889
Q ss_pred cCCCeEEEeccCCCC--CHHHHHHHHhhCCCc---ccc-------h---hhhhHHHHhcCCCeEEee
Q psy11600 86 ANVDQYTFHVEPVDN--VPQVIRQIKEAGMKV---GQV-------L---QDWIEPMADANVDQYTFH 137 (277)
Q Consensus 86 ag~d~i~~H~e~~d~--g~~~i~~i~~~~~~~---~d~-------p---~~~i~~~~~~g~d~it~H 137 (277)
+|++.+++-.-..+. ....++.+|+.+..+ +.. | .+.++.+.++||+.|++-
T Consensus 129 aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~ 195 (539)
T 1rqb_A 129 NGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALK 195 (539)
T ss_dssp TTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 999999544222332 456677777776543 211 3 344566788899988875
No 186
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=89.90 E-value=1.9 Score=37.18 Aligned_cols=86 Identities=15% Similarity=0.146 Sum_probs=59.6
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCc--ccc-hhhhhH
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKV--GQV-LQDWIE 124 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~--~d~-p~~~i~ 124 (277)
.+|.++.++.+|+..|++++-. +.-..+.+..+.+.+.|++.++.++... .+.+++.+++.+..+ .-+ ....+.
T Consensus 150 ~SF~~~~l~~~~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~v~~~~~~G~~v~~wTvn~~~~~~ 226 (252)
T 2pz0_A 150 SSFNHYSLRDVKKMAPHLKIGL-LYQCGLVEPWHMALRMEAYSLHPFYFNI--IPELVEGCKKNGVKLFPWTVDRKEDME 226 (252)
T ss_dssp EESBHHHHHHHHHHCTTSEEEE-EECSBCSSTHHHHHHTTCSEEEEBGGGC--CHHHHHHHHHTTCEECCBCCCSHHHHH
T ss_pred EeCCHHHHHHHHHHCCCCCEEE-EecCccccHHHHHHHcCCeEEecchhcC--CHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence 3688999999999878876543 2222334445566778999996655444 488999999987653 233 344567
Q ss_pred HHHhcCCCeEEe
Q psy11600 125 PMADANVDQYTF 136 (277)
Q Consensus 125 ~~~~~g~d~it~ 136 (277)
.+.+.|+|.|+-
T Consensus 227 ~l~~~GvdgIiT 238 (252)
T 2pz0_A 227 RMIKAGVDGIIT 238 (252)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHcCCCEEEc
Confidence 788999998875
No 187
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=89.84 E-value=3.1 Score=39.53 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=52.6
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
....+.++.+.+.|+|.+-++...|.+. .-.+.++++|+.+|++|+-+. .+.++ +..+.+.++|+|.|.+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~~----~~~e~i~~i~~~~p~~pvi~g-~~~t~-e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHSR----RVIETLEMIKADYPDLPVVAG-NVATP-EGTEALIKAGADAVKV 305 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSSH----HHHHHHHHHHHHCTTSCEEEE-EECSH-HHHHHHHHTTCSEEEE
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCchH----HHHHHHHHHHHHCCCceEEeC-CcCCH-HHHHHHHHcCCCEEEE
Confidence 4556788899999999988877766432 345889999998878887653 23444 4568889999999965
No 188
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=89.82 E-value=9 Score=33.01 Aligned_cols=53 Identities=17% Similarity=0.205 Sum_probs=36.0
Q ss_pred hhHHHHHhhCCCccEEEeCCCCcCc-------HHHHHHccCCC---CCcccc-cCHHHHHHHHHh
Q psy11600 201 PKVKWLRENYPTLNIEVDGGVGPNT-------IDECAKCLTGF---GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 201 ~kI~~l~~~~~~~~i~vdGgV~~~t-------v~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~ 254 (277)
+.++++.+.. .+.+..-||++..+ +..+.++|++. |+..+. ++..+.++++++
T Consensus 192 ~~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l~~ 255 (273)
T 2qjg_A 192 DSFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAVCK 255 (273)
T ss_dssp HHHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHHHHH
Confidence 4455555443 57788899999877 77777888874 555554 466677777665
No 189
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=89.74 E-value=0.46 Score=41.44 Aligned_cols=170 Identities=10% Similarity=0.122 Sum_probs=98.1
Q ss_pred eeeeccCcHHhHHHHHhcC--CCeEEEeccCC-CCCHHHHHHHHhhCCC-cc-----cc---hhhhhHHHHhcCCCeEEe
Q psy11600 69 THMMVQNPQQWIEPMADAN--VDQYTFHVEPV-DNVPQVIRQIKEAGMK-VG-----QV---LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 69 ~Hlmv~~p~~~i~~l~~ag--~d~i~~H~e~~-d~g~~~i~~i~~~~~~-~~-----d~---p~~~i~~~~~~g~d~it~ 136 (277)
+-|=+.++++.++.+.+.+ ++++=+|.+.. .+|+.+++.+|+.... .. |+ +..+++.+.++|+|++|+
T Consensus 13 vALD~~~~~~al~l~~~~~~~v~~~Kvg~~lf~~~G~~~v~~L~~~g~~iflDlK~~DI~nTv~~~~~~~~~~gad~vTv 92 (239)
T 3tr2_A 13 VAIDAGTVEQARAQINPLTPELCHLKIGSILFTRYGPAFVEELMQKGYRIFLDLKFYDIPQTVAGACRAVAELGVWMMNI 92 (239)
T ss_dssp EECCCSSHHHHHHHHTTCCTTTCEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEeCCCCHHHHHHHHHHhCCcccEEEeCHHHHHhhCHHHHHHHHhcCCCEEEEecccccchHHHHHHHHHHhCCCCEEEE
Confidence 3344556777676666554 55777787763 4599999999987543 33 44 466889999999999999
Q ss_pred ecCCCCChHHHHHHHHH----hC-C--ccceeeCCCCCHH--hH-------------HHHHh---hcCceEEEEecCCCC
Q psy11600 137 HVEPVDNVPQVIRQIKE----AG-M--KVGLAIKPKTPVD--VI-------------AEYIE---SADLVLIMTVEPGFG 191 (277)
Q Consensus 137 H~E~~~~~~~~~~~I~~----~g-~--~~g~~i~p~t~~~--~i-------------~~~i~---~~d~vl~mav~Pgt~ 191 (277)
|.- .-.+.++...+ .+ . ..-+++-.=|+.+ .+ ..+.+ ..+ +.++. .+.
T Consensus 93 h~~---~G~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~A~~a~~~g-~~GvV-~s~-- 165 (239)
T 3tr2_A 93 HIS---GGRTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKVPDIVCRMATLAKSAG-LDGVV-CSA-- 165 (239)
T ss_dssp EGG---GCHHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHHT-CCEEE-CCH--
T ss_pred ecc---CCHHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCCCHHHHHHHHHHHHHHcC-CCEEE-ECc--
Confidence 986 22333332222 11 0 1134433333332 11 11111 111 11111 111
Q ss_pred CchhhhhhhhhHHHHHhhCC-CccEEEeCCCCc-----------CcHHHHHHccCCC---CCcccc-cCHHHHHHHHHhh
Q psy11600 192 GQKFMQDMMPKVKWLRENYP-TLNIEVDGGVGP-----------NTIDECAKCLTGF---GGQKFM-QDMMPKVKWLREN 255 (277)
Q Consensus 192 gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV~~-----------~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~~ 255 (277)
...+.+++..+ ++ +.|-+||.. +|..++.++|+++ |...|. ++..+.++++++.
T Consensus 166 ---------~e~~~ir~~~~~~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~a~~~i~~~ 235 (239)
T 3tr2_A 166 ---------QEAALLRKQFDRNF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLKALEAIDKD 235 (239)
T ss_dssp ---------HHHHHHHTTCCTTS-EEEECCBC----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHH
T ss_pred ---------hhHHHHHHhcCCCc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 12455665543 44 446677765 3788899999997 777777 4777778877764
No 190
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=89.64 E-value=2.4 Score=37.46 Aligned_cols=122 Identities=16% Similarity=0.157 Sum_probs=68.0
Q ss_pred eeec--cccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc
Q psy11600 9 GPSI--LNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 9 ~~s~--~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a 86 (277)
|||- ++-| .+..+..+..++.|++++|+=--++-|- =+++.++.+|+. .++|+..-=.+-++. +++...++
T Consensus 62 sPs~g~i~~~-~~p~~~A~~y~~~GA~~isvltd~~~f~----Gs~~~l~~ir~~-v~lPvl~kdfiid~~-qv~~A~~~ 134 (272)
T 3qja_A 62 SPSAGALATI-ADPAKLAQAYQDGGARIVSVVTEQRRFQ----GSLDDLDAVRAS-VSIPVLRKDFVVQPY-QIHEARAH 134 (272)
T ss_dssp ------------CHHHHHHHHHHTTCSEEEEECCGGGHH----HHHHHHHHHHHH-CSSCEEEESCCCSHH-HHHHHHHT
T ss_pred CCCCCccCCC-CCHHHHHHHHHHcCCCEEEEecChhhcC----CCHHHHHHHHHh-CCCCEEECccccCHH-HHHHHHHc
Confidence 5663 3333 3566677788899999999643333231 125789999986 788887654444554 36777889
Q ss_pred CCCeEEEeccCCCC--CHHHHHHHHhhCCCc-ccc--hhhhhHHHHhcCCCeEEeec
Q psy11600 87 NVDQYTFHVEPVDN--VPQVIRQIKEAGMKV-GQV--LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 87 g~d~i~~H~e~~d~--g~~~i~~i~~~~~~~-~d~--p~~~i~~~~~~g~d~it~H~ 138 (277)
|+|.+++.....+. -..+++..++.+..+ .++ +++ ++...++|+|+|.+..
T Consensus 135 GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t~ee-~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 135 GADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQE-ADRALKAGAKVIGVNA 190 (272)
T ss_dssp TCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHTCSEEEEES
T ss_pred CCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcCCHHH-HHHHHHCCCCEEEECC
Confidence 99999554333331 122333444433332 122 333 4444567888877753
No 191
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=89.55 E-value=1.1 Score=40.85 Aligned_cols=78 Identities=13% Similarity=0.123 Sum_probs=55.7
Q ss_pred HHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhC--CCcccc----hhhhhHH
Q psy11600 52 HPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAG--MKVGQV----LQDWIEP 125 (277)
Q Consensus 52 ~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~--~~~~d~----p~~~i~~ 125 (277)
...+++.|+.+|..++.+ -|.++ ++++...++|+|+| -+|.++ +..++.+.+.. ...+.+ -.+-+..
T Consensus 219 ~~Av~~ar~~~p~~kIeV--EVdtl-dea~eAl~aGaD~I--~LDn~~--~~~l~~av~~l~~~v~ieaSGGIt~~~I~~ 291 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEV--ETETL-AELEEAISAGADII--MLDNFS--LEMMREAVKINAGRAALENSGNITLDNLKE 291 (320)
T ss_dssp HHHHHHHHHHSTTSCEEE--EESSH-HHHHHHHHTTCSEE--EEESCC--HHHHHHHHHHHTTSSEEEEESSCCHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEE--EECCH-HHHHHHHHcCCCEE--EECCCC--HHHHHHHHHHhCCCCeEEEECCCCHHHHHH
Confidence 367888898888776655 66677 45666777999999 556554 66676665543 223333 6778899
Q ss_pred HHhcCCCeEEe
Q psy11600 126 MADANVDQYTF 136 (277)
Q Consensus 126 ~~~~g~d~it~ 136 (277)
+++.|+|+|++
T Consensus 292 ~a~tGVD~isv 302 (320)
T 3paj_A 292 CAETGVDYISV 302 (320)
T ss_dssp HHTTTCSEEEC
T ss_pred HHHcCCCEEEE
Confidence 99999999987
No 192
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=89.51 E-value=1.1 Score=40.54 Aligned_cols=79 Identities=16% Similarity=0.159 Sum_probs=55.3
Q ss_pred HHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhC-C-Ccccc----hhhhhHH
Q psy11600 52 HPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAG-M-KVGQV----LQDWIEP 125 (277)
Q Consensus 52 ~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~-~-~~~d~----p~~~i~~ 125 (277)
...++..|+..|..++.| -|.++ ++++...++|+|.| -+|-++ +..++++.+.. . ..+.+ -.+-+..
T Consensus 195 ~~Av~~ar~~~p~~kIeV--Ev~tl-~e~~eAl~aGaDiI--mLDn~s--~~~l~~av~~~~~~v~leaSGGIt~~~i~~ 267 (300)
T 3l0g_A 195 TLAIQRLRKNLKNEYIAI--ECDNI-SQVEESLSNNVDMI--LLDNMS--ISEIKKAVDIVNGKSVLEVSGCVNIRNVRN 267 (300)
T ss_dssp HHHHHHHHHHSSSCCEEE--EESSH-HHHHHHHHTTCSEE--EEESCC--HHHHHHHHHHHTTSSEEEEESSCCTTTHHH
T ss_pred HHHHHHHHHhCCCCCEEE--EECCH-HHHHHHHHcCCCEE--EECCCC--HHHHHHHHHhhcCceEEEEECCCCHHHHHH
Confidence 367888898777776665 56666 56666777899999 666544 66666554432 2 23333 6778899
Q ss_pred HHhcCCCeEEee
Q psy11600 126 MADANVDQYTFH 137 (277)
Q Consensus 126 ~~~~g~d~it~H 137 (277)
+++.|+|+|++-
T Consensus 268 ~A~tGVD~IsvG 279 (300)
T 3l0g_A 268 IALTGVDYISIG 279 (300)
T ss_dssp HHTTTCSEEECG
T ss_pred HHHcCCCEEEeC
Confidence 999999999974
No 193
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=89.50 E-value=1.7 Score=37.35 Aligned_cols=86 Identities=14% Similarity=0.153 Sum_probs=58.0
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcc--cc-hhhhhH
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG--QV-LQDWIE 124 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~--d~-p~~~i~ 124 (277)
.+|.++.++.+|+..|++++-. +.-..+.++.+.+.+.|++.+++++... .+.+++.+++.+..+. -+ -..-+.
T Consensus 146 ~Sf~~~~l~~~~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~v~~~~~~G~~v~~wTvn~~~~~~ 222 (247)
T 2otd_A 146 SSFEIDALEAAQQAAPELPRGL-LLDEWRDDWRELTARLGCVSIHLNHKLL--DKARVMQLKDAGLRILVYTVNKPQHAA 222 (247)
T ss_dssp EESCHHHHHHHHHHCTTSCEEE-EESSCCTTHHHHHHHHTCSEEEEEGGGC--CHHHHHHHHHTTCEEEEECCCCHHHHH
T ss_pred EcCCHHHHHHHHHHCCCCCEEE-EecCCcccHHHHHHHcCCeEEecChHhC--CHHHHHHHHHCCCEEEEEccCCHHHHH
Confidence 3588999999999888876533 2223455555666777999997766554 4788888888775532 22 223456
Q ss_pred HHHhcCCCeEEe
Q psy11600 125 PMADANVDQYTF 136 (277)
Q Consensus 125 ~~~~~g~d~it~ 136 (277)
.+.+.|+|.|+-
T Consensus 223 ~l~~~GvdgI~T 234 (247)
T 2otd_A 223 ELLRWGVDCICT 234 (247)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHcCCCEEEe
Confidence 677888887764
No 194
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=89.44 E-value=2.6 Score=40.19 Aligned_cols=143 Identities=15% Similarity=0.151 Sum_probs=84.1
Q ss_pred HHHHHhcCCCeEEEeccCCC-C--CHHHHHHHHhhCC-Ccc----cc-hhhhhHHHHhcCCCeEEeecCCCCChHHHHHH
Q psy11600 80 IEPMADANVDQYTFHVEPVD-N--VPQVIRQIKEAGM-KVG----QV-LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQ 150 (277)
Q Consensus 80 i~~l~~ag~d~i~~H~e~~d-~--g~~~i~~i~~~~~-~~~----d~-p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~ 150 (277)
+....++|+|++-|-+.... - .+...++|.+... ..+ +. ++...+...+++.|.+=+|=+ ......+.
T Consensus 268 a~~a~~~Gad~iGfIf~~~SpR~V~~~~a~~i~~~~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLHG~---E~~~~~~~ 344 (452)
T 1pii_A 268 AKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGN---EEQLYIDT 344 (452)
T ss_dssp HHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHCCCEEEEEESSCCHHHHHHHHHHHTCSEEEECSC---CCHHHHHH
T ss_pred HHHHHhcCCCEEEeecCCCCCCCCCHHHHHHHHhcCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECCC---CCHHHHHH
Confidence 34445779999988864321 1 5666666655531 111 11 566666777889999999975 44445555
Q ss_pred HHHh---CCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHH
Q psy11600 151 IKEA---GMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTID 227 (277)
Q Consensus 151 I~~~---g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~ 227 (277)
++.. +.+.=.++..+..++. ..|- .+|.+++=+ ..|..|+.|.-.++.. .....+.+.||++.+|+.
T Consensus 345 l~~~~p~~~~iika~~v~~~~~~-~~~~-~~d~~LlD~-~~GGtG~~fdW~~l~~-------~~~~p~iLAGGL~p~NV~ 414 (452)
T 1pii_A 345 LREALPAHVAIWKALSVGETLPA-REFQ-HVDKYVLDN-GQGGSGQRFDWSLLNG-------QSLGNVLLAGGLGADNCV 414 (452)
T ss_dssp HHHHSCTTSEEEEEEECSSSCCC-CCCT-TCCEEEEES-CSCCSSCCCCGGGGTT-------SCCTTEEEESSCCTTTHH
T ss_pred HHhhccCCCcEEEEEecCCccch-hhhh-cccEEEecC-CCCCCCCccCHHHhhc-------ccCCcEEEEcCCCHHHHH
Confidence 6542 2222222333322221 1111 367766555 4466788887655532 124568899999999998
Q ss_pred HHHHccCC
Q psy11600 228 ECAKCLTG 235 (277)
Q Consensus 228 ~~~~~gpg 235 (277)
+..+.+|-
T Consensus 415 ~ai~~~p~ 422 (452)
T 1pii_A 415 EAAQTGCA 422 (452)
T ss_dssp HHHTTCCS
T ss_pred HHHhcCCC
Confidence 77667765
No 195
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=89.20 E-value=0.55 Score=42.31 Aligned_cols=74 Identities=18% Similarity=0.310 Sum_probs=44.9
Q ss_pred hhhHHHHHhhCCC-ccEEEeCCCCcCcHHH---HHHccCCC-CCcccccCHHHHHH-HHHhhCCCCeEEEeCCCCccCHH
Q psy11600 200 MPKVKWLRENYPT-LNIEVDGGVGPNTIDE---CAKCLTGF-GGQKFMQDMMPKVK-WLRENYPTLNIEVDGGVGPNTID 273 (277)
Q Consensus 200 l~kI~~l~~~~~~-~~i~vdGgV~~~tv~~---~~~~gpg~-ggq~F~~~~~~kI~-~l~~~~~~~~I~VDGGI~~~~~~ 273 (277)
.+-++.+++..+. ..+.+ ...|.++ ..++|+++ .-..|.++.++++. .++...++..|++-||||++|++
T Consensus 184 ~~ai~~~r~~~~~~~~i~v----ev~tlee~~~A~~aGaD~I~ld~~~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~ 259 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEV----ECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNLP 259 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEE----EESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHH
T ss_pred HHHHHHHHHhCCcCCeEEE----ecCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhhccCCCeeEEEECCCCHHHHH
Confidence 3446666665543 34443 2445444 45677776 22334454444433 34445678899999999999999
Q ss_pred HhhC
Q psy11600 274 ECAK 277 (277)
Q Consensus 274 ~~~~ 277 (277)
.+++
T Consensus 260 ~~~~ 263 (299)
T 2jbm_A 260 QFCG 263 (299)
T ss_dssp HHCC
T ss_pred HHHH
Confidence 8763
No 196
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=89.19 E-value=4.6 Score=34.93 Aligned_cols=77 Identities=10% Similarity=0.157 Sum_probs=58.3
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN 100 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~ 100 (277)
.++.+.+.++|++++| .|+ +.+++++..++. ++++-...+ +|.+-. ...++|+|++-+..-..-|
T Consensus 96 ~~~a~~Ai~AGA~fIv--------sP~--~~~~vi~~~~~~--gi~~ipGv~--TptEi~-~A~~~Gad~vK~FPa~~~g 160 (232)
T 4e38_A 96 GEQALAAKEAGATFVV--------SPG--FNPNTVRACQEI--GIDIVPGVN--NPSTVE-AALEMGLTTLKFFPAEASG 160 (232)
T ss_dssp HHHHHHHHHHTCSEEE--------CSS--CCHHHHHHHHHH--TCEEECEEC--SHHHHH-HHHHTTCCEEEECSTTTTT
T ss_pred HHHHHHHHHcCCCEEE--------eCC--CCHHHHHHHHHc--CCCEEcCCC--CHHHHH-HHHHcCCCEEEECcCcccc
Confidence 6788888999999987 466 678889888874 788877755 677655 4567899999775422236
Q ss_pred CHHHHHHHHhhC
Q psy11600 101 VPQVIRQIKEAG 112 (277)
Q Consensus 101 g~~~i~~i~~~~ 112 (277)
|+..+++++..-
T Consensus 161 G~~~lkal~~p~ 172 (232)
T 4e38_A 161 GISMVKSLVGPY 172 (232)
T ss_dssp HHHHHHHHHTTC
T ss_pred CHHHHHHHHHHh
Confidence 899999998754
No 197
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=88.96 E-value=0.87 Score=42.19 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=50.8
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
+..+.++.+.+.|+|.+|+|...|+.- .-.+.++++|+.+|++++-+. .+..+ +.++.+.++|+|.+.+
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~----~~~~~I~~ik~~~p~v~Vi~G-~v~t~-e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSE----GVLQRIRETRAAYPHLEIIGG-NVATA-EGARALIEAGVSAVKV 176 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSH----HHHHHHHHHHHHCTTCEEEEE-EECSH-HHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCH----HHHHHHHHHHHhcCCCceEee-eeCCH-HHHHHHHHcCCCEEEE
Confidence 356788899999999999998766421 223568899988888877553 23444 4567788999999976
No 198
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=88.87 E-value=1.8 Score=40.15 Aligned_cols=111 Identities=16% Similarity=0.141 Sum_probs=68.0
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE-----
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF----- 93 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~----- 93 (277)
+..+.++.+.+.|+|.+.++..-| -| .+-.+.++++|+.++++|+-+. -+.+ .+.++.+.++|+|.|.+
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g--~~--~~~~e~i~~ir~~~~~~pviv~-~v~~-~~~a~~a~~~Gad~I~vg~~~G 226 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHG--HS--TRIIELIKKIKTKYPNLDLIAG-NIVT-KEAALDLISVGADCLKVGIGPG 226 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC--SS--HHHHHHHHHHHHHCTTCEEEEE-EECS-HHHHHHHHTTTCSEEEECSSCS
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCC--Ch--HHHHHHHHHHHHHCCCCeEEEc-CCCc-HHHHHHHHhcCCCEEEECCCCC
Confidence 346677788889999977753322 12 2345778999988668887762 1223 46788889999999977
Q ss_pred -ecc----CCCCCH--HHHHHHHh---hCCCcccc------hhhhhHHHHhcCCCeEEe
Q psy11600 94 -HVE----PVDNVP--QVIRQIKE---AGMKVGQV------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 94 -H~e----~~d~g~--~~i~~i~~---~~~~~~d~------p~~~i~~~~~~g~d~it~ 136 (277)
|.. ...++| ..++.+++ ....|+-. +.+..+.++ +|||.+.+
T Consensus 227 ~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala-~GAd~V~i 284 (404)
T 1eep_A 227 SICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIA-AGADSVMI 284 (404)
T ss_dssp TTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHH-HTCSEEEE
T ss_pred cCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHH-cCCCHHhh
Confidence 210 001232 23455554 22333322 666666665 78888877
No 199
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=88.73 E-value=1.1 Score=41.43 Aligned_cols=115 Identities=15% Similarity=0.086 Sum_probs=69.6
Q ss_pred HHHHHHHHHHcCCCEEEEecccc--------------------ccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC----
Q psy11600 20 LHSESQNLLDSGADYLHLDVMDG--------------------TFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN---- 75 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~DimDg--------------------~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~---- 75 (277)
+.+..+++.++|.|.+-+..--| .+-....|-.++++++|+.++.-++-+-|=..+
T Consensus 163 f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g 242 (361)
T 3gka_A 163 FRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHT 242 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSS
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCC
Confidence 34555667889999944333221 111122244789999998865326655444321
Q ss_pred -----c----HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcC-CCeEEee
Q psy11600 76 -----P----QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV-----LQDWIEPMADAN-VDQYTFH 137 (277)
Q Consensus 76 -----p----~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g-~d~it~H 137 (277)
+ .+.++.+.++|+|++++|.-. .++..++.+|+....|+-. |+.- +.+.+.| ||.|.|=
T Consensus 243 ~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~~~~iPvi~~Ggit~e~a-~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 243 MGDSDPAATFGHVARELGRRRIAFLFARESF--GGDAIGQQLKAAFGGPFIVNENFTLDSA-QAALDAGQADAVAWG 316 (361)
T ss_dssp CCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--STTCCHHHHHHHHCSCEEEESSCCHHHH-HHHHHTTSCSEEEES
T ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEECCCC--CCHHHHHHHHHHcCCCEEEeCCCCHHHH-HHHHHcCCccEEEEC
Confidence 1 234778889999999887533 2346788888876555422 4444 4445555 9999883
No 200
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=88.63 E-value=1.8 Score=39.81 Aligned_cols=118 Identities=13% Similarity=0.162 Sum_probs=71.1
Q ss_pred HHHHHHHHHHcCCCEEEEeccccc----c-ccC---------------CCCCHHHHHHHHhcCC-CCeeeeeeecc----
Q psy11600 20 LHSESQNLLDSGADYLHLDVMDGT----F-VPN---------------LTFGHPVVKCLRNKIP-KAFFETHMMVQ---- 74 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~DimDg~----f-vp~---------------~~~g~~~v~~l~~~~~-~~~~d~Hlmv~---- 74 (277)
+.+..++++++|.|.+-+..--|- | .|+ ..|-.++|+++|+..+ +.++-+-|-..
T Consensus 160 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~ 239 (363)
T 3l5l_A 160 FVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDG 239 (363)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSS
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCC
Confidence 345556677889999444432221 1 121 1233679999998764 55665544322
Q ss_pred -------CcHHhHHHHHhcCCCeEEEeccC---------CC-CCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcC-C
Q psy11600 75 -------NPQQWIEPMADANVDQYTFHVEP---------VD-NVPQVIRQIKEAGMKVGQV-----LQDWIEPMADAN-V 131 (277)
Q Consensus 75 -------~p~~~i~~l~~ag~d~i~~H~e~---------~d-~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g-~ 131 (277)
+..+.++.+.++|+|++++|.-. .. ....+++.+|+....|+-. -.+-++.+.+.| |
T Consensus 240 ~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~a 319 (363)
T 3l5l_A 240 RDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQL 319 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCc
Confidence 23345788889999999888411 01 1346788888877665533 133455556666 9
Q ss_pred CeEEee
Q psy11600 132 DQYTFH 137 (277)
Q Consensus 132 d~it~H 137 (277)
|.|.|=
T Consensus 320 D~V~iG 325 (363)
T 3l5l_A 320 DLVSVG 325 (363)
T ss_dssp SEEECC
T ss_pred cEEEec
Confidence 998873
No 201
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=88.61 E-value=0.97 Score=41.79 Aligned_cols=114 Identities=14% Similarity=0.044 Sum_probs=69.5
Q ss_pred HHHHHHHHHHcCCCEEEEeccccc------c-cc--C-------------CCCCHHHHHHHHhcCCCCeeeeeeeccC--
Q psy11600 20 LHSESQNLLDSGADYLHLDVMDGT------F-VP--N-------------LTFGHPVVKCLRNKIPKAFFETHMMVQN-- 75 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~DimDg~------f-vp--~-------------~~~g~~~v~~l~~~~~~~~~d~Hlmv~~-- 75 (277)
+.+..+++.++|.|. |+|-=++ | .| | ..|-.++|+++|+.++.-++-+-|-..+
T Consensus 155 f~~AA~~a~~aGfDg--VEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~ 232 (362)
T 4ab4_A 155 YRSGAENAKAAGFDG--VEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADA 232 (362)
T ss_dssp HHHHHHHHHHTTCSE--EEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCS
T ss_pred HHHHHHHHHHcCCCE--EEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccc
Confidence 335556678889999 5544332 1 12 1 2234789999998865335655544321
Q ss_pred -------c----HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEee
Q psy11600 76 -------P----QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 76 -------p----~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H 137 (277)
+ .+.++.+.++|+|++++|.-. .++..++.+|+....|+-. |+.-.+.+.+-+||.|.|=
T Consensus 233 ~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 233 HDMGDADRAETFTYVARELGKRGIAFICSRERE--ADDSIGPLIKEAFGGPYIVNERFDKASANAALASGKADAVAFG 308 (362)
T ss_dssp SSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC--CTTCCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred cccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC--CCHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEEC
Confidence 1 223777889999999887543 2346788888876655422 5544444444449999883
No 202
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=88.59 E-value=1.9 Score=38.30 Aligned_cols=142 Identities=14% Similarity=0.158 Sum_probs=82.7
Q ss_pred CceEeeeccccCcccHHHHHHHHHHcCCCEEEE--eccccccccCCCCCHHHHHHHHhcCCCCeeeeeeecc--------
Q psy11600 5 QCMIGPSILNSDLSNLHSESQNLLDSGADYLHL--DVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQ-------- 74 (277)
Q Consensus 5 ~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~--DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~-------- 74 (277)
+.+|..|+..-+...+.++++.+...|+|.+=+ |..+... +...=.+.++.+|+..+++|+-+++-..
T Consensus 39 ~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~--~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~ 116 (276)
T 3o1n_A 39 APKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVT--TAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQAL 116 (276)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTT--CHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCC
T ss_pred CcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccC--cHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCC
Confidence 457888999889888888888888778887554 5444211 1111235677888865589999988763
Q ss_pred CcHHhHHHH---HhcC-CCeEEEeccCCCCCHHHHHHH----HhhCCC----cccc---h--hhh---hHHHHhcCCCeE
Q psy11600 75 NPQQWIEPM---ADAN-VDQYTFHVEPVDNVPQVIRQI----KEAGMK----VGQV---L--QDW---IEPMADANVDQY 134 (277)
Q Consensus 75 ~p~~~i~~l---~~ag-~d~i~~H~e~~d~g~~~i~~i----~~~~~~----~~d~---p--~~~---i~~~~~~g~d~i 134 (277)
+.++|++.+ .+.| +|++ .+|.. .....++++ ++...+ .||. | ++| +..+.+.|||.+
T Consensus 117 ~~~~~~~ll~~~l~~g~~dyI--DvEl~-~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIv 193 (276)
T 3o1n_A 117 TTGQYIDLNRAAVDSGLVDMI--DLELF-TGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIP 193 (276)
T ss_dssp CHHHHHHHHHHHHHHTCCSEE--EEEGG-GCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHhcCCCCEE--EEECc-CCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEE
Confidence 234455444 4558 9999 66642 223444444 333332 2332 3 233 344556688765
Q ss_pred EeecCCCCChHHHHHHHH
Q psy11600 135 TFHVEPVDNVPQVIRQIK 152 (277)
Q Consensus 135 t~H~E~~~~~~~~~~~I~ 152 (277)
=+=.-|. +..+.++.++
T Consensus 194 Kia~~a~-s~~Dvl~Ll~ 210 (276)
T 3o1n_A 194 KIAVMPQ-TKADVLTLLT 210 (276)
T ss_dssp EEEECCS-SHHHHHHHHH
T ss_pred EEEecCC-ChHHHHHHHH
Confidence 5433211 4455555444
No 203
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=88.29 E-value=3 Score=40.17 Aligned_cols=69 Identities=17% Similarity=0.144 Sum_probs=51.9
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
+..+.++.|.+.|+|.+.+|..+|++. .-.+.++++|+.+|++++-+. -+. ..+..+.+.++|+|.+.+
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g~~~----~v~~~i~~i~~~~~~~~vi~g-~v~-t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHGHSQ----GVIDKVKEVRAKYPSLNIIAG-NVA-TAEATKALIEAGANVVKV 324 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCTTSH----HHHHHHHHHHHHCTTSEEEEE-EEC-SHHHHHHHHHHTCSEEEE
T ss_pred chHHHHHHHHhhccceEEecccccchh----hhhhHHHHHHHhCCCceEEee-eec-cHHHHHHHHHhCCCEEEE
Confidence 445678888899999999998876543 224689999999888777652 233 345678889999999965
No 204
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=88.28 E-value=5.2 Score=37.17 Aligned_cols=83 Identities=14% Similarity=0.079 Sum_probs=52.9
Q ss_pred CCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEe--cc-CCCCCH---HHHHHHHhhC--CCcccc---
Q psy11600 50 FGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFH--VE-PVDNVP---QVIRQIKEAG--MKVGQV--- 118 (277)
Q Consensus 50 ~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H--~e-~~d~g~---~~i~~i~~~~--~~~~d~--- 118 (277)
+..+.|+++|+. +++|+-+-. +.+ .+..+.+.++|+|.|+++ -- ..++++ ..+.++++.. ..++-.
T Consensus 239 ~~~~~i~~lr~~-~~~PvivKg-v~~-~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GG 315 (392)
T 2nzl_A 239 ISWEDIKWLRRL-TSLPIVAKG-ILR-GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGG 315 (392)
T ss_dssp CCHHHHHHHC---CCSCEEEEE-ECC-HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSS
T ss_pred HHHHHHHHHHHh-hCCCEEEEe-cCC-HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECC
Confidence 456778999986 678888763 334 456788999999999884 21 123333 3444555432 233322
Q ss_pred ---hhhhhHHHHhcCCCeEEe
Q psy11600 119 ---LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 ---p~~~i~~~~~~g~d~it~ 136 (277)
+.+.++.++ +|||.+.+
T Consensus 316 I~~g~Dv~kala-lGAd~V~i 335 (392)
T 2nzl_A 316 VRKGTDVLKALA-LGAKAVFV 335 (392)
T ss_dssp CCSHHHHHHHHH-TTCSEEEE
T ss_pred CCCHHHHHHHHH-hCCCeeEE
Confidence 788888877 79988887
No 205
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=88.25 E-value=3.4 Score=37.81 Aligned_cols=216 Identities=14% Similarity=0.113 Sum_probs=112.0
Q ss_pred eeccccCcc-cHHHHHHHHHHcCCCEEE-----------------EeccccccccCCCC---CH-HHHHHHHh---cCCC
Q psy11600 10 PSILNSDLS-NLHSESQNLLDSGADYLH-----------------LDVMDGTFVPNLTF---GH-PVVKCLRN---KIPK 64 (277)
Q Consensus 10 ~s~~~~d~~-~l~~~~~~l~~~~~~~~h-----------------~DimDg~fvp~~~~---g~-~~v~~l~~---~~~~ 64 (277)
|=++++=+. +-.+.++.+...|.-.+= +..- ..+++.+.| |. .+++.+++ ..++
T Consensus 50 Pv~lAaG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~-~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~ 128 (345)
T 3oix_A 50 CLMNAAGVYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTK-LGSINSMGLPNLGINYYLDYVTELQKQPDS 128 (345)
T ss_dssp SEEECTTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECS-SEEEECCCCCBSCHHHHHHHHHHHHHSTTC
T ss_pred CCEEcCCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecc-cchhccCCCCChhHHHHHHHHHHHhhccCC
Confidence 444555444 334677777777765521 1111 123333344 33 34444543 2467
Q ss_pred CeeeeeeeccCcHHhHHH---HHhcCCC-eEEEeccCC--CC----------CHHHHHHHHhhCCCcccc-------hhh
Q psy11600 65 AFFETHMMVQNPQQWIEP---MADANVD-QYTFHVEPV--DN----------VPQVIRQIKEAGMKVGQV-------LQD 121 (277)
Q Consensus 65 ~~~d~Hlmv~~p~~~i~~---l~~ag~d-~i~~H~e~~--d~----------g~~~i~~i~~~~~~~~d~-------p~~ 121 (277)
.|+-+.+.-.++++|++. +.++|++ ++.+.+-+- .| -.++++++|+.+..|+.+ ..+
T Consensus 129 ~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~ 208 (345)
T 3oix_A 129 KNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFDIVH 208 (345)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCCHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCCCHHH
Confidence 899999998899998554 4456876 897776431 11 345667777776666544 244
Q ss_pred hhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhh
Q psy11600 122 WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMP 201 (277)
Q Consensus 122 ~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~ 201 (277)
+.+...++|++.++++.- +. ..| .++.+...++. +..... .-|.+|....+-.++
T Consensus 209 ~a~~~~~aga~~i~~int----~n-------t~g--~~~~i~~~~~~------~~~~~~------~gGlSG~ai~p~a~~ 263 (345)
T 3oix_A 209 FDQAAAIFNXYPLTFVNC----IN-------SIG--NGLVIEDETVV------IXPKNG------FGGIGGDYVKPTALA 263 (345)
T ss_dssp HHHHHHHHTTSCCSEEEE----CC-------CEE--EEECEETTEES------CSGGGG------EEEEEEGGGHHHHHH
T ss_pred HHHHHHHhCCCceEEEEe----ec-------ccc--cceeeccCccc------cccccc------cCCcCCccccHHHHH
Confidence 445555556655544321 00 000 00001111000 000000 012334334444567
Q ss_pred hHHHHHhhCC-CccEEEeCCCCc-CcHHHHHHccCCC---CCc-ccc-cCHHHHHHH
Q psy11600 202 KVKWLRENYP-TLNIEVDGGVGP-NTIDECAKCLTGF---GGQ-KFM-QDMMPKVKW 251 (277)
Q Consensus 202 kI~~l~~~~~-~~~i~vdGgV~~-~tv~~~~~~gpg~---ggq-~F~-~~~~~kI~~ 251 (277)
.+.++++..+ ++.+...|||.- +.+.++..+|++. |.. .|. +...+++++
T Consensus 264 ~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~ 320 (345)
T 3oix_A 264 NVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFKRITK 320 (345)
T ss_dssp HHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHHH
Confidence 7888887665 789999999952 4455566788885 444 332 455555553
No 206
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=88.14 E-value=2.6 Score=38.93 Aligned_cols=98 Identities=11% Similarity=0.150 Sum_probs=68.3
Q ss_pred CCeeeeeeeccC-------cHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcc--cc--hhhhhHHHHhcCCC
Q psy11600 64 KAFFETHMMVQN-------PQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG--QV--LQDWIEPMADANVD 132 (277)
Q Consensus 64 ~~~~d~Hlmv~~-------p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~--d~--p~~~i~~~~~~g~d 132 (277)
+.|+.|-=|+.. ..+++..|.++|||++-+=+-.+ ...+.++.||+.+..|+ |. --+.+..-+++|+|
T Consensus 29 ~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp~~-~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~d 107 (366)
T 3noy_A 29 DAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPHK-EDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVH 107 (366)
T ss_dssp TSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECCSH-HHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCS
T ss_pred CCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCCh-HHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCC
Confidence 456777777654 23368888999999995543221 24677888888877665 43 23455567899999
Q ss_pred eEEeecCCCCCh------HHHHHHHHHhCCccceeeCCC
Q psy11600 133 QYTFHVEPVDNV------PQVIRQIKEAGMKVGLAIKPK 165 (277)
Q Consensus 133 ~it~H~E~~~~~------~~~~~~I~~~g~~~g~~i~p~ 165 (277)
.+.+.+. +. ..+.+..++.|...-+|.|.|
T Consensus 108 klRINPG---Nig~~~~~~~vv~~ak~~~~piRIGvN~G 143 (366)
T 3noy_A 108 GIRINPG---NIGKEEIVREIVEEAKRRGVAVRIGVNSG 143 (366)
T ss_dssp EEEECHH---HHSCHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred eEEECCc---ccCchhHHHHHHHHHHHcCCCEEEecCCc
Confidence 9999776 55 356777778787778888777
No 207
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=88.13 E-value=0.9 Score=42.10 Aligned_cols=119 Identities=13% Similarity=0.175 Sum_probs=72.3
Q ss_pred cHHHHHHHHHHcCCCEEEEecccc----ccc-cC---------------CCCCHHHHHHHHhcCCCCeeeeeeecc----
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDG----TFV-PN---------------LTFGHPVVKCLRNKIPKAFFETHMMVQ---- 74 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg----~fv-p~---------------~~~g~~~v~~l~~~~~~~~~d~Hlmv~---- 74 (277)
.+.+..++++++|.|.+.+..--| +|. |. ..|-.++|+++|+....-++-+-+-..
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~ 247 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 556677788889999966554322 222 22 233467899999876522555555321
Q ss_pred -----C----cHHhHHHHHhcCCCeEEEeccCCC-C-----CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeE
Q psy11600 75 -----N----PQQWIEPMADANVDQYTFHVEPVD-N-----VPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQY 134 (277)
Q Consensus 75 -----~----p~~~i~~l~~ag~d~i~~H~e~~d-~-----g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~i 134 (277)
+ ..+.++.+.++|+|++++|.-..+ . ....++.+|+....|+-. |++..+.+.+-+||.|
T Consensus 248 g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V 327 (376)
T 1icp_A 248 EAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLV 327 (376)
T ss_dssp TCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcEE
Confidence 1 134577888899999988843211 1 123567788876655422 5555555555459998
Q ss_pred Eee
Q psy11600 135 TFH 137 (277)
Q Consensus 135 t~H 137 (277)
.+=
T Consensus 328 ~~g 330 (376)
T 1icp_A 328 AYG 330 (376)
T ss_dssp EES
T ss_pred eec
Confidence 883
No 208
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=88.00 E-value=2.1 Score=39.54 Aligned_cols=23 Identities=30% Similarity=0.507 Sum_probs=18.7
Q ss_pred cHHHHHHHHHHcCCCEEEEeccc
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMD 41 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimD 41 (277)
.+.++++.|.++|++++.+|=-.
T Consensus 168 a~~~ei~~l~~aG~~~IQiDeP~ 190 (375)
T 1ypx_A 168 AYQKAIQAFYDAGCRYLQLDDTS 190 (375)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECH
T ss_pred HHHHHHHHHHHCCCCEEEecCCc
Confidence 35578888999999999998654
No 209
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=87.97 E-value=4.3 Score=35.57 Aligned_cols=129 Identities=19% Similarity=0.153 Sum_probs=77.4
Q ss_pred hhhhHHHHhcCC--CeEEeecCCCCC------hHHHHHHHHHhCCccceeeCCCCCHHhHHH---HHhhcCceEEEEecC
Q psy11600 120 QDWIEPMADANV--DQYTFHVEPVDN------VPQVIRQIKEAGMKVGLAIKPKTPVDVIAE---YIESADLVLIMTVEP 188 (277)
Q Consensus 120 ~~~i~~~~~~g~--d~it~H~E~~~~------~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~---~i~~~d~vl~mav~P 188 (277)
.+.++.+.+... ..+.+-+- + .++..+..++.| ..--+-|..|+++..+ .++..++-++.-+.|
T Consensus 76 ~~~~~~~~~~r~~~Pivlm~Y~---N~i~~~G~e~F~~~~~~aG--vdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP 150 (252)
T 3tha_A 76 HSVFELLARIKTKKALVFMVYY---NLIFSYGLEKFVKKAKSLG--ICALIVPELSFEESDDLIKECERYNIALITLVSV 150 (252)
T ss_dssp HHHHHHHHHCCCSSEEEEECCH---HHHHHHCHHHHHHHHHHTT--EEEEECTTCCGGGCHHHHHHHHHTTCEECEEEET
T ss_pred HHHHHHHHHHhcCCCEEEEecc---CHHHHhhHHHHHHHHHHcC--CCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 455555555443 44444322 1 234556666666 4445668888865444 456677777777788
Q ss_pred CCCCchhhhhhhhhHHHHHhhCCCccEEEe-CCCCcCcHHHHHHccCCCCC-cccccCHHHHHHHHHhhCCCCeEEEeCC
Q psy11600 189 GFGGQKFMQDMMPKVKWLRENYPTLNIEVD-GGVGPNTIDECAKCLTGFGG-QKFMQDMMPKVKWLRENYPTLNIEVDGG 266 (277)
Q Consensus 189 gt~gq~~~~~~l~kI~~l~~~~~~~~i~vd-GgV~~~tv~~~~~~gpg~gg-q~F~~~~~~kI~~l~~~~~~~~I~VDGG 266 (277)
.++ .++++.+.+....+-..|. .|++ |. +.+.++..+.++++|+.. +.-+.|-+|
T Consensus 151 ~t~--------~eRi~~ia~~a~gFiY~Vs~~GvT--------------G~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfG 207 (252)
T 3tha_A 151 TTP--------KERVKKLVKHAKGFIYLLASIGIT--------------GTKSVEEAILQDKVKEIRSFT-NLPIFVGFG 207 (252)
T ss_dssp TSC--------HHHHHHHHTTCCSCEEEECCSCSS--------------SCSHHHHHHHHHHHHHHHTTC-CSCEEEESS
T ss_pred CCc--------HHHHHHHHHhCCCeEEEEecCCCC--------------CcccCCCHHHHHHHHHHHHhc-CCcEEEEcC
Confidence 776 3567777766666644442 1222 12 233345667777877764 567999999
Q ss_pred C-CccCHHHhh
Q psy11600 267 V-GPNTIDECA 276 (277)
Q Consensus 267 I-~~~~~~~~~ 276 (277)
| |+++++++.
T Consensus 208 Ist~e~a~~~~ 218 (252)
T 3tha_A 208 IQNNQDVKRMR 218 (252)
T ss_dssp CCSHHHHHHHT
T ss_pred cCCHHHHHHHH
Confidence 9 568777654
No 210
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=87.89 E-value=2.2 Score=35.77 Aligned_cols=143 Identities=10% Similarity=0.074 Sum_probs=79.0
Q ss_pred HhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCCc-c-cchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHh
Q psy11600 78 QWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMKV-G-QVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEA 154 (277)
Q Consensus 78 ~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~~-~-d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~ 154 (277)
+.++.+.++|++++.+- ..+. ..+..+.+++.+... . .+..+.++...++|+|.|.+..+ +.... ...
T Consensus 17 ~~~~~a~~~Gv~~v~lr--~k~~~~~~~~~~i~~l~~~~~~~livnd~~~~A~~~gadgvhl~~~---~~~~~----~~~ 87 (210)
T 3ceu_A 17 KIITALFEEGLDILHLR--KPETPAMYSERLLTLIPEKYHRRIVTHEHFYLKEEFNLMGIHLNAR---NPSEP----HDY 87 (210)
T ss_dssp HHHHHHHHTTCCEEEEC--CSSCCHHHHHHHHHHSCGGGGGGEEESSCTTHHHHTTCSEEECCSS---SCSCC----TTC
T ss_pred HHHHHHHHCCCCEEEEc--cCCCCHHHHHHHHHHHHHHhCCeEEEeCCHHHHHHcCCCEEEECcc---ccccc----ccc
Confidence 56888889999999444 2222 334455555554321 1 11235668889999999866544 33211 111
Q ss_pred CCccceeeCCCCCHHhHHHHHhhcCceEEEEec-----CCCCCchhhhhhhhhHHHHHhhC-CCccEEEeCCCCcCcHHH
Q psy11600 155 GMKVGLAIKPKTPVDVIAEYIESADLVLIMTVE-----PGFGGQKFMQDMMPKVKWLRENY-PTLNIEVDGGVGPNTIDE 228 (277)
Q Consensus 155 g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~-----Pgt~gq~~~~~~l~kI~~l~~~~-~~~~i~vdGgV~~~tv~~ 228 (277)
+...|.+ ..++ +++......+|++.+=.+- |+++ ..+- ++.++++.+.. .++-+...||++.+++.+
T Consensus 88 ~~~ig~s--~~t~-~e~~~A~~GaDyv~~g~vf~t~sk~~~~-~~~g---~~~l~~~~~~~~~~iPviaiGGI~~~nv~~ 160 (210)
T 3ceu_A 88 AGHVSCS--CHSV-EEVKNRKHFYDYVFMSPIYDSISKVNYY-STYT---AEELREAQKAKIIDSKVMALGGINEDNLLE 160 (210)
T ss_dssp CSEEEEE--ECSH-HHHHTTGGGSSEEEECCCC----------CCCC---HHHHHHHHHTTCSSTTEEEESSCCTTTHHH
T ss_pred CCEEEEe--cCCH-HHHHHHhhCCCEEEECCcCCCCCCCCCC-CCCC---HHHHHHHHHhcCCCCCEEEECCCCHHHHHH
Confidence 3333333 3333 3333222457776532222 2210 0111 23345555443 567889999999999999
Q ss_pred HHHccCCC
Q psy11600 229 CAKCLTGF 236 (277)
Q Consensus 229 ~~~~gpg~ 236 (277)
+.++|+..
T Consensus 161 ~~~~Ga~g 168 (210)
T 3ceu_A 161 IKDFGFGG 168 (210)
T ss_dssp HHHTTCSE
T ss_pred HHHhCCCE
Confidence 99999885
No 211
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=87.85 E-value=0.97 Score=40.50 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=51.8
Q ss_pred HHHHHHHHhcCCC-CeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhC--CCcccc----hhhhhH
Q psy11600 52 HPVVKCLRNKIPK-AFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAG--MKVGQV----LQDWIE 124 (277)
Q Consensus 52 ~~~v~~l~~~~~~-~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~--~~~~d~----p~~~i~ 124 (277)
...++..|+..+. .++.+ -+.+++ +++...++|+|++-++ .+ .+..++++.+.. ..++.+ -.+-+.
T Consensus 183 ~~av~~ar~~~~~~~~IgV--ev~t~e-ea~eA~~aGaD~I~ld--~~--~~~~~k~av~~v~~~ipi~AsGGIt~eni~ 255 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEV--EVRSLE-ELEEALEAGADLILLD--NF--PLEALREAVRRVGGRVPLEASGNMTLERAK 255 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEE--EESSHH-HHHHHHHHTCSEEEEE--SC--CHHHHHHHHHHHTTSSCEEEESSCCHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEE--EeCCHH-HHHHHHHcCCCEEEEC--CC--CHHHHHHHHHHhCCCCeEEEEcCCCHHHHH
Confidence 4568888887654 45555 445654 4555668899999555 33 355666655443 234443 577889
Q ss_pred HHHhcCCCeEEe
Q psy11600 125 PMADANVDQYTF 136 (277)
Q Consensus 125 ~~~~~g~d~it~ 136 (277)
.++++|+|+|++
T Consensus 256 ~~a~tGvD~IsV 267 (286)
T 1x1o_A 256 AAAEAGVDYVSV 267 (286)
T ss_dssp HHHHHTCSEEEC
T ss_pred HHHHcCCCEEEE
Confidence 999999999997
No 212
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=87.75 E-value=0.61 Score=41.81 Aligned_cols=73 Identities=12% Similarity=0.151 Sum_probs=52.5
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeee--eccCcHHhHHHHHhcCCCe
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHM--MVQNPQQWIEPMADANVDQ 90 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hl--mv~~p~~~i~~l~~ag~d~ 90 (277)
.|+..+.+-++.+.+.|+|. +=+-| |...|+..+ +.++.+++.+|++++.+|. -..-...-.-...++|+++
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~--i~l~DT~G~~~P~~~~--~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~ 231 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYE--VSLGDTIGVGTAGATR--RLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAV 231 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSE--EEEEESSSCCCHHHHH--HHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHcCCCE--EEEeCCCCCcCHHHHH--HHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCE
Confidence 45566667777777999999 55568 555565333 6788899887789999998 4444444455567789998
Q ss_pred E
Q psy11600 91 Y 91 (277)
Q Consensus 91 i 91 (277)
+
T Consensus 232 v 232 (302)
T 2ftp_A 232 F 232 (302)
T ss_dssp E
T ss_pred E
Confidence 8
No 213
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=87.55 E-value=1.8 Score=38.87 Aligned_cols=29 Identities=14% Similarity=0.418 Sum_probs=25.4
Q ss_pred hhCCCccEEEeCCCCcCcHHHHHHccCCC
Q psy11600 208 ENYPTLNIEVDGGVGPNTIDECAKCLTGF 236 (277)
Q Consensus 208 ~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ 236 (277)
..++++.+.+.|||+.+|+.++.++|+++
T Consensus 240 ~~~~~~~I~ASGGIt~~ni~~~~~aGaD~ 268 (299)
T 2jbm_A 240 AQFPSVAVEASGGITLDNLPQFCGPHIDV 268 (299)
T ss_dssp HHCTTSEEEEESSCCTTTHHHHCCTTCCE
T ss_pred ccCCCeeEEEECCCCHHHHHHHHHCCCCE
Confidence 34567789999999999999999999986
No 214
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=87.55 E-value=13 Score=32.44 Aligned_cols=143 Identities=13% Similarity=0.093 Sum_probs=81.5
Q ss_pred CceEeeeccccCcccHHHHHHHHHHcCCCEEE--EeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeec---------
Q psy11600 5 QCMIGPSILNSDLSNLHSESQNLLDSGADYLH--LDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMV--------- 73 (277)
Q Consensus 5 ~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h--~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv--------- 73 (277)
+.+|..|+..-+...+.++++.+.+.|+|.+= +|..+. + ++...=.+.++.+|+...++|+-+++-.
T Consensus 19 ~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~-~-~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~ 96 (257)
T 2yr1_A 19 EPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRA-I-DDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIP 96 (257)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTT-T-TCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCS
T ss_pred CcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccc-c-CcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCC
Confidence 46788999988888887888887777887743 343332 1 1111113456788875338899888853
Q ss_pred cCcHHhHHHH---HhcC-CCeEEEeccCCCC--CHHHHHHHHhhCCC----cccc---h--hh---hhHHHHhcCCCeEE
Q psy11600 74 QNPQQWIEPM---ADAN-VDQYTFHVEPVDN--VPQVIRQIKEAGMK----VGQV---L--QD---WIEPMADANVDQYT 135 (277)
Q Consensus 74 ~~p~~~i~~l---~~ag-~d~i~~H~e~~d~--g~~~i~~i~~~~~~----~~d~---p--~~---~i~~~~~~g~d~it 135 (277)
.+.++|++.+ .+.| +|++ .+|.... -.++++..++.+.+ .|+. | ++ ++..+.+.|||.+=
T Consensus 97 ~~~~~~~~ll~~~~~~g~~d~i--DvEl~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivK 174 (257)
T 2yr1_A 97 LNEAEVRRLIEAICRSGAIDLV--DYELAYGERIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAK 174 (257)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEE--EEEGGGTTHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCCEE--EEECCCChhHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEE
Confidence 2344454444 4557 9999 5554221 22344444444332 2332 4 23 34556677888665
Q ss_pred eecCCCCChHHHHHHHH
Q psy11600 136 FHVEPVDNVPQVIRQIK 152 (277)
Q Consensus 136 ~H~E~~~~~~~~~~~I~ 152 (277)
+=.-|. +..+.++.++
T Consensus 175 ia~~a~-s~~D~l~ll~ 190 (257)
T 2yr1_A 175 VAVMPK-SPEDVLVLLQ 190 (257)
T ss_dssp EEECCS-SHHHHHHHHH
T ss_pred EEeccC-CHHHHHHHHH
Confidence 544321 3556555554
No 215
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=87.55 E-value=1.5 Score=39.52 Aligned_cols=70 Identities=16% Similarity=0.112 Sum_probs=42.9
Q ss_pred hhHHHHHhhCCCccEEEeCCCCcCcHHHH---HHccCCC-CCcccccCHHHHHHHHHh-hCCCCeEEEeCCCCccCHHHh
Q psy11600 201 PKVKWLRENYPTLNIEVDGGVGPNTIDEC---AKCLTGF-GGQKFMQDMMPKVKWLRE-NYPTLNIEVDGGVGPNTIDEC 275 (277)
Q Consensus 201 ~kI~~l~~~~~~~~i~vdGgV~~~tv~~~---~~~gpg~-ggq~F~~~~~~kI~~l~~-~~~~~~I~VDGGI~~~~~~~~ 275 (277)
+-++.+++..|...++| .++|.+++ .++|++. =--.|.+ +.+++..+ ..++..+++-||||++|++.+
T Consensus 196 ~Av~~ar~~~p~~kIeV----Ev~tl~e~~eAl~aGaDiImLDn~s~---~~l~~av~~~~~~v~leaSGGIt~~~i~~~ 268 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAI----ECDNISQVEESLSNNVDMILLDNMSI---SEIKKAVDIVNGKSVLEVSGCVNIRNVRNI 268 (300)
T ss_dssp HHHHHHHHHSSSCCEEE----EESSHHHHHHHHHTTCSEEEEESCCH---HHHHHHHHHHTTSSEEEEESSCCTTTHHHH
T ss_pred HHHHHHHHhCCCCCEEE----EECCHHHHHHHHHcCCCEEEECCCCH---HHHHHHHHhhcCceEEEEECCCCHHHHHHH
Confidence 34556666666666665 45676665 4466653 0122333 44444333 235788999999999999987
Q ss_pred hC
Q psy11600 276 AK 277 (277)
Q Consensus 276 ~~ 277 (277)
++
T Consensus 269 A~ 270 (300)
T 3l0g_A 269 AL 270 (300)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 216
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=87.42 E-value=2.9 Score=36.10 Aligned_cols=85 Identities=13% Similarity=0.193 Sum_probs=59.7
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeec-----cCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcc--c---
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMV-----QNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG--Q--- 117 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv-----~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~--d--- 117 (277)
.+|.+..++.+|+..|++++-. .+ .++.++++.+...|++.+++++... .+.+++.+++.+..++ -
T Consensus 147 ~Sf~~~~l~~~~~~~p~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~v~~~~~~G~~v~~wTv~~ 222 (258)
T 2o55_A 147 CSFHHEALAHLKALCPDVKITY--LFNYMGQPTPLDFVEQACYGDANGVSMLFHYL--TKEQVCTAHEKGLSVTVWMPWI 222 (258)
T ss_dssp EESSHHHHHHHHHHCTTCEEEE--ECCTTSCCCCTTHHHHHHHTTCSEEEEEGGGC--CHHHHHHHHHTTCEEEEECCTT
T ss_pred EeCCHHHHHHHHHHCCCCcEEE--EEeCCCCCCHHHHHHHHHhcCCeEEecChhhc--CHHHHHHHHHCCCEEEEeeCCC
Confidence 3688999999999888876533 22 2355555557778999997776554 4889999998875422 2
Q ss_pred --chhhhhHHHHhcCCCeEEe
Q psy11600 118 --VLQDWIEPMADANVDQYTF 136 (277)
Q Consensus 118 --~p~~~i~~~~~~g~d~it~ 136 (277)
.....+..+.+.|+|.|+-
T Consensus 223 ~~n~~~~~~~l~~~GvdgI~T 243 (258)
T 2o55_A 223 FDDSEEDWKKCLELQVDLICS 243 (258)
T ss_dssp CCCCHHHHHHHHHHTCSEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEe
Confidence 2344557788899998775
No 217
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=87.30 E-value=3.8 Score=42.74 Aligned_cols=126 Identities=13% Similarity=0.073 Sum_probs=84.2
Q ss_pred eEeeeccc-cCcccHHHHHHHHHHcCCCEEEEeccccccccCC--------------CCCHHHHHHHHhcCCCCeeeeee
Q psy11600 7 MIGPSILN-SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNL--------------TFGHPVVKCLRNKIPKAFFETHM 71 (277)
Q Consensus 7 ~~~~s~~~-~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~--------------~~g~~~v~~l~~~~~~~~~d~Hl 71 (277)
.+..+++. .|...+.+..+.+++.|+|.+-+.+- .|+. .+-.+.++++|+. .++|+.+=+
T Consensus 636 ~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~----~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~ 710 (1025)
T 1gte_A 636 IVIASIMCSYNKNDWMELSRKAEASGADALELNLS----CPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL 710 (1025)
T ss_dssp EEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC----CBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECC----CCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe
Confidence 35567754 47778889999999999999777653 2332 1224588899986 578887755
Q ss_pred ec--cCcHHhHHHHHhcCCCeEEEe----------------------ccCCCC---C-------HHHHHHHHhhC-CCcc
Q psy11600 72 MV--QNPQQWIEPMADANVDQYTFH----------------------VEPVDN---V-------PQVIRQIKEAG-MKVG 116 (277)
Q Consensus 72 mv--~~p~~~i~~l~~ag~d~i~~H----------------------~e~~d~---g-------~~~i~~i~~~~-~~~~ 116 (277)
.- .+..+..+.+.++|+|.+++. .-...+ | ...++++++.. ..|+
T Consensus 711 ~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipv 790 (1025)
T 1gte_A 711 TPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPI 790 (1025)
T ss_dssp CSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCE
T ss_pred CCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCE
Confidence 33 234566888899999999882 111111 2 25788888776 4454
Q ss_pred cc------hhhhhHHHHhcCCCeEEeec
Q psy11600 117 QV------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 117 d~------p~~~i~~~~~~g~d~it~H~ 138 (277)
-. +++..+.+. +|||.|.+--
T Consensus 791 i~~GGI~s~~da~~~l~-~Ga~~v~vg~ 817 (1025)
T 1gte_A 791 LATGGIDSAESGLQFLH-SGASVLQVCS 817 (1025)
T ss_dssp EEESSCCSHHHHHHHHH-TTCSEEEESH
T ss_pred EEecCcCCHHHHHHHHH-cCCCEEEEee
Confidence 32 677666665 8999988743
No 218
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=87.25 E-value=1.9 Score=40.04 Aligned_cols=87 Identities=8% Similarity=0.062 Sum_probs=52.5
Q ss_pred CCHHHHHHHHhcCCCCeeeeeeeccC-------------cHHhHHHHHhcCCCeEEEeccCC---CCCHHHHHHHHhhCC
Q psy11600 50 FGHPVVKCLRNKIPKAFFETHMMVQN-------------PQQWIEPMADANVDQYTFHVEPV---DNVPQVIRQIKEAGM 113 (277)
Q Consensus 50 ~g~~~v~~l~~~~~~~~~d~Hlmv~~-------------p~~~i~~l~~ag~d~i~~H~e~~---d~g~~~i~~i~~~~~ 113 (277)
|-.++++++|+....-++-+-|-..+ ..+.++.+.++|+|++++|.-.. ..... ++.+|+...
T Consensus 229 ~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~ 307 (379)
T 3aty_A 229 LIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSYS 307 (379)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHCC
Confidence 33577899998765334444332211 22347778889999998885221 11125 888988876
Q ss_pred Ccccc-----hhhhhHHHHhcCCCeEEee
Q psy11600 114 KVGQV-----LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 114 ~~~d~-----p~~~i~~~~~~g~d~it~H 137 (277)
.|+-. |++..+.+.+-+||.|.|=
T Consensus 308 iPvi~~G~it~~~a~~~l~~g~aD~V~ig 336 (379)
T 3aty_A 308 GVKISNLRYDFEEADQQIREGKVDAVAFG 336 (379)
T ss_dssp SCEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred CcEEEECCCCHHHHHHHHHcCCCeEEEec
Confidence 65432 5555444444449998883
No 219
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=87.20 E-value=4.6 Score=34.78 Aligned_cols=85 Identities=15% Similarity=0.209 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeeccC------cHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCc--ccc-
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMVQN------PQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKV--GQV- 118 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv~~------p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~--~d~- 118 (277)
.+|.+..++.+|+..|++++- +.... +...++.....|++.++.++... .+.+++.+++.+..+ .-+
T Consensus 138 ~SF~~~~l~~~~~~~p~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~G~~V~~WTvn 213 (250)
T 3ks6_A 138 SSFLLASMDELWKATTRPRLW--LVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTA--DAGLMAQVQAAGLDFGCWAAH 213 (250)
T ss_dssp EESCHHHHHHHHHHCCSCEEE--EECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGC--CHHHHHHHHHTTCEEEEECCC
T ss_pred EeCCHHHHHHHHHHCCCCcEE--EEecccccccchhHHHHHHHhcCCCEEecchhhC--CHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999988988753 44332 22344455677999986655443 588999999887653 333
Q ss_pred hhhhhHHHHhcCCCeEEe
Q psy11600 119 LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 p~~~i~~~~~~g~d~it~ 136 (277)
-...+..+.+.|+|.|+-
T Consensus 214 ~~~~~~~l~~~GVDgIiT 231 (250)
T 3ks6_A 214 TPSQITKALDLGVKVFTT 231 (250)
T ss_dssp SHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEc
Confidence 234566788999999885
No 220
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=87.14 E-value=5.5 Score=35.42 Aligned_cols=100 Identities=17% Similarity=0.170 Sum_probs=65.5
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeeccCcH---------------------HhHHHHHhcCCCeEEEeccCCCCCHHHHH
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMVQNPQ---------------------QWIEPMADANVDQYTFHVEPVDNVPQVIR 106 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~---------------------~~i~~l~~ag~d~i~~H~e~~d~g~~~i~ 106 (277)
.+|.+..++.+|+..|++++-. |.-..+. ...+.+...|++.++.++... .+.+|+
T Consensus 186 ~SF~~~~l~~~~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~v~ 262 (313)
T 3l12_A 186 HSFDWALLGECRRQAPDLPTSY-LSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYFLDV--TPELVA 262 (313)
T ss_dssp EESCHHHHHHHHHHCTTSCEEE-EECCCC-------------CCCTTTCCSCHHHHHHHHTCSEEEEBGGGC--CHHHHH
T ss_pred EcCCHHHHHHHHHHCCCCcEEE-EeccccccccccccccccccccchhccccHHHHHHHhCCcEEecchhcC--CHHHHH
Confidence 3689999999999888876543 2211110 113445667899996666544 488999
Q ss_pred HHHhhCCCc--ccc-hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhC
Q psy11600 107 QIKEAGMKV--GQV-LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAG 155 (277)
Q Consensus 107 ~i~~~~~~~--~d~-p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g 155 (277)
.+++.+..+ .-+ -..-+..+.+.|+|.|+-= .+..+.+.+++.|
T Consensus 263 ~~~~~Gl~V~~WTVn~~~~~~~l~~~GVDgIiTD-----~P~~~~~~l~~~g 309 (313)
T 3l12_A 263 EAHDLGLIVLTWTVNEPEDIRRMATTGVDGIVTD-----YPGRTQRILIDMG 309 (313)
T ss_dssp HHHHTTCEEEEBCCCSHHHHHHHHHHTCSEEEES-----CHHHHHHHHHHTT
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHcCCCEEEeC-----CHHHHHHHHHhcC
Confidence 999887653 233 2345677889999998862 4555666666543
No 221
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=86.86 E-value=1.7 Score=41.64 Aligned_cols=70 Identities=14% Similarity=0.182 Sum_probs=52.6
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
.+..+.++.+.+.|+|.+.+|...|+.- .-.+.++++|+.+|++++-+- -+..+ +.++.+.++|+|.+.+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~----~~~~~v~~i~~~~p~~~Vi~g-~v~t~-e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSK----GVIERVRWVKQTFPDVQVIGG-NIATA-EAAKALAEAGADAVKV 297 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBH----HHHHHHHHHHHHCTTSEEEEE-EECSH-HHHHHHHHTTCSEEEE
T ss_pred cchHHHHHHHhhcccceEEecccCCcch----hHHHHHHHHHHHCCCceEEEe-eeCcH-HHHHHHHHcCCCEEEE
Confidence 3456778888899999999998776431 234789999998888877662 23344 5678899999999965
No 222
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=86.76 E-value=0.68 Score=41.52 Aligned_cols=74 Identities=15% Similarity=0.272 Sum_probs=46.8
Q ss_pred hhhHHHHHhhCCC-ccEEEeCCCCcCcHHH---HHHccCCC-CCcccccCHHHHHH-HHHhhCCCCeEEEeCCCCccCHH
Q psy11600 200 MPKVKWLRENYPT-LNIEVDGGVGPNTIDE---CAKCLTGF-GGQKFMQDMMPKVK-WLRENYPTLNIEVDGGVGPNTID 273 (277)
Q Consensus 200 l~kI~~l~~~~~~-~~i~vdGgV~~~tv~~---~~~~gpg~-ggq~F~~~~~~kI~-~l~~~~~~~~I~VDGGI~~~~~~ 273 (277)
..-++.++++.+. ..++|. +.|.++ ..++|+++ .-..|.++.++++. .++...++..+++-||||++|++
T Consensus 180 ~~av~~ar~~~~~~~~I~VE----V~tleea~eA~~aGaD~I~LDn~~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~ 255 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVE----VENLEDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVSGGITEENVS 255 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEE----ESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGG
T ss_pred HHHHHHHHHhCCCCceEEEE----eCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhhccCCCceEEEECCCCHHHHH
Confidence 3456677777755 455553 445444 56677876 23345554444433 34444567899999999999999
Q ss_pred HhhC
Q psy11600 274 ECAK 277 (277)
Q Consensus 274 ~~~~ 277 (277)
.+++
T Consensus 256 ~~a~ 259 (285)
T 1o4u_A 256 LYDF 259 (285)
T ss_dssp GGCC
T ss_pred HHHH
Confidence 8753
No 223
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=86.73 E-value=2.8 Score=40.09 Aligned_cols=117 Identities=16% Similarity=0.158 Sum_probs=48.4
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCC------eeeeeeecc---CcHHhHHHHHhc
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKA------FFETHMMVQ---NPQQWIEPMADA 86 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~------~~d~Hlmv~---~p~~~i~~l~~a 86 (277)
..+.+.++.+.+.++..+. |.| |.++=-++.. ++++... +|.. .+.+-..+. +..+.++.+.++
T Consensus 166 ~~l~ea~~~m~~~~i~~lp--VVDe~g~lvGiIT~~-Dil~~~~--~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~a 240 (490)
T 4avf_A 166 TPLEEMKAKLYENRIEKML--VVDENFYLRGLVTFR-DIEKAKT--YPLASKDEQGRLRVGAAVGTGADTGERVAALVAA 240 (490)
T ss_dssp ----------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHcCCCEEE--EEcCCCcEEEEEehH-Hhhhhcc--CcchhhhccCcceeeeeeccccchHHHHHHHhhc
Confidence 4566777778877777755 344 5554333322 2333222 2332 233333333 345678899999
Q ss_pred CCCeEEEeccCCCC--CHHHHHHHHhhC-CCccc---c-hhhhhHHHHhcCCCeEEeecC
Q psy11600 87 NVDQYTFHVEPVDN--VPQVIRQIKEAG-MKVGQ---V-LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 87 g~d~i~~H~e~~d~--g~~~i~~i~~~~-~~~~d---~-p~~~i~~~~~~g~d~it~H~E 139 (277)
|+|.+.++.-.... ..+.|+++|+.. ..++- + -.+.+..+.++|||.|.+-..
T Consensus 241 G~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g 300 (490)
T 4avf_A 241 GVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIG 300 (490)
T ss_dssp TCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSS
T ss_pred ccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCC
Confidence 99999665432211 347788888875 33432 2 456678889999999987443
No 224
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=86.68 E-value=14 Score=31.53 Aligned_cols=81 Identities=12% Similarity=0.074 Sum_probs=54.1
Q ss_pred ceEeeecccc---------CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeec---
Q psy11600 6 CMIGPSILNS---------DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMV--- 73 (277)
Q Consensus 6 ~~~~~s~~~~---------d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv--- 73 (277)
++|+-|.++. ....+.+.++.+.+.|.+. +++. +.+ | .+..++++.+. .++.+..+...
T Consensus 10 mklg~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~--vEl~-~~~-~----~~~~~~~~l~~-~gl~~~~~~~~~~~ 80 (301)
T 3cny_A 10 IKWGIAPIGWRNDDIPSIGKDNNLQQLLSDIVVAGFQG--TEVG-GFF-P----GPEKLNYELKL-RNLEIAGQWFSSYI 80 (301)
T ss_dssp EEEEECGGGTCCSSSTTTTTTCCHHHHHHHHHHHTCCE--ECCC-TTC-C----CHHHHHHHHHH-TTCEECEEEEEECH
T ss_pred eeEEeccccccCccccccccCCCHHHHHHHHHHhCCCE--EEec-CCC-C----CHHHHHHHHHH-CCCeEEEEeccCCC
Confidence 5577777766 2357899999999999999 5555 222 3 45556555554 57777776321
Q ss_pred ---------cCcHHhHHHHHhcCCCeEEEec
Q psy11600 74 ---------QNPQQWIEPMADANVDQYTFHV 95 (277)
Q Consensus 74 ---------~~p~~~i~~l~~ag~d~i~~H~ 95 (277)
....+.++...+.|++++.+|.
T Consensus 81 ~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~ 111 (301)
T 3cny_A 81 IRDGIEKASEAFEKHCQYLKAINAPVAVVSE 111 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ChhhHHHHHHHHHHHHHHHHHcCCCEEEecC
Confidence 1233456666778999999884
No 225
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=86.34 E-value=8.8 Score=34.69 Aligned_cols=89 Identities=10% Similarity=0.137 Sum_probs=56.2
Q ss_pred CCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc--CCCeEEEeccCC-CCCHHHHHHHHhh----CCC------c
Q psy11600 49 TFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA--NVDQYTFHVEPV-DNVPQVIRQIKEA----GMK------V 115 (277)
Q Consensus 49 ~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a--g~d~i~~H~e~~-d~g~~~i~~i~~~----~~~------~ 115 (277)
.||.+.++.+.++-+++-+-.+ +.++++.++.+.+. .+.++=+|.+.. ++|+.+++.+++. ... .
T Consensus 70 p~~~~L~~~m~~k~~~LiVALD--~~~~~~al~l~~~l~~~v~~vKvG~~l~~~~G~~~v~~L~~~a~~~g~~IflDlK~ 147 (312)
T 3g3d_A 70 PVASKLLRLMQKKETNLCLSAD--VSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIFEDRKF 147 (312)
T ss_dssp HHHHHHHHHHHHHTCCEEEECC--CSCHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred hHHHHHHHHHHHhCCCEEEEeC--CCCHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhCCCEEEEECcc
Confidence 4677788888765466544433 44555544443333 467888898864 6799999999873 322 3
Q ss_pred ccchhhhhHHHH----h--cCCCeEEeecC
Q psy11600 116 GQVLQDWIEPMA----D--ANVDQYTFHVE 139 (277)
Q Consensus 116 ~d~p~~~i~~~~----~--~g~d~it~H~E 139 (277)
+|+|...-..+. + .++|++|+|.-
T Consensus 148 ~DIpnTv~~a~~~a~~~~a~~aD~vTVHa~ 177 (312)
T 3g3d_A 148 ADIGNTVKKQYEGGIFKIASWADLVNAHVV 177 (312)
T ss_dssp CSCHHHHHHHHHCTTTCHHHHCSEEEEEST
T ss_pred cccHHHHHHHHHHHHHhhhccCCEEEEccC
Confidence 355655444332 2 36999999975
No 226
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=86.20 E-value=7 Score=34.89 Aligned_cols=85 Identities=9% Similarity=0.160 Sum_probs=57.6
Q ss_pred HHHHHHHhcCCCCeeeeeeeccCcHHhHH---HHHhcCCCeEEEeccCC------CC-----------CHHHHHHHHhhC
Q psy11600 53 PVVKCLRNKIPKAFFETHMMVQNPQQWIE---PMADANVDQYTFHVEPV------DN-----------VPQVIRQIKEAG 112 (277)
Q Consensus 53 ~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~---~l~~ag~d~i~~H~e~~------d~-----------g~~~i~~i~~~~ 112 (277)
...+.+. .-.+.++-+-|+-.+|+.+.+ .+.++ +|.|-+|...- ++ ..++++++++..
T Consensus 48 ~~~~~l~-~~~~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~ 125 (318)
T 1vhn_A 48 KTEELLP-QPHERNVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV 125 (318)
T ss_dssp HHHHHSC-CTTCTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHC
T ss_pred hHHHhhh-CcCCCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhh
Confidence 4455552 225788999999878887644 44456 99998886532 11 345678888876
Q ss_pred CCcccc----------hhhhhHHHHhcCCCeEEeecC
Q psy11600 113 MKVGQV----------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 113 ~~~~d~----------p~~~i~~~~~~g~d~it~H~E 139 (277)
..|+.+ ..++++.+.++|+|.|++|--
T Consensus 126 ~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~ 162 (318)
T 1vhn_A 126 SGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTR 162 (318)
T ss_dssp SSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCC
Confidence 554432 226788889999999999853
No 227
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=86.02 E-value=3.5 Score=36.55 Aligned_cols=91 Identities=13% Similarity=0.235 Sum_probs=56.2
Q ss_pred ccCcccHHHHHHHHHHcCCCEEEEeccccccc------cCCCCCHHHHHHHHhcCCCCeeeeeeeccCcH----HhHHHH
Q psy11600 14 NSDLSNLHSESQNLLDSGADYLHLDVMDGTFV------PNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQ----QWIEPM 83 (277)
Q Consensus 14 ~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fv------p~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~----~~i~~l 83 (277)
+.....+-++++.+.+.|+..+. +.++++. |+-..=.++++.+++. +++. -+.+...||. +.++.+
T Consensus 32 ~r~~e~i~~ei~~l~~~G~~ei~--l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~-~gi~-~ir~~~~~p~~l~~e~l~~l 107 (304)
T 2qgq_A 32 SRSIEDITREVEDLLKEGKKEII--LVAQDTTSYGIDLYRKQALPDLLRRLNSL-NGEF-WIRVMYLHPDHLTEEIISAM 107 (304)
T ss_dssp BCCHHHHHHHHHHHHHTTCCEEE--EECTTGGGTTHHHHSSCCHHHHHHHHHTS-SSSC-EEEECCCCGGGCCHHHHHHH
T ss_pred eeCHHHHHHHHHHHHHCCCcEEE--EEeEcccccCCCCCcHHHHHHHHHHHHhc-CCCc-EEEEeeeecccCCHHHHHHH
Confidence 34556777888888888988754 3333221 1111224677778763 5543 3455556664 468889
Q ss_pred HhcC--CCeEEEeccCCCCCHHHHHHHHh
Q psy11600 84 ADAN--VDQYTFHVEPVDNVPQVIRQIKE 110 (277)
Q Consensus 84 ~~ag--~d~i~~H~e~~d~g~~~i~~i~~ 110 (277)
.++| ++++ |+-.-.+.+.+++.+++
T Consensus 108 ~~~g~~~~~l--~i~lqs~s~~vl~~m~r 134 (304)
T 2qgq_A 108 LELDKVVKYF--DVPVQHGSDKILKLMGR 134 (304)
T ss_dssp HHCTTBCCEE--ECCCBCSCHHHHHHTTC
T ss_pred HhCCCCccEE--EEecccCCHHHHHHhCC
Confidence 9999 8888 55444555777776654
No 228
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=85.79 E-value=18 Score=31.78 Aligned_cols=155 Identities=13% Similarity=0.116 Sum_probs=83.5
Q ss_pred cCcHHhHHHHHhcCCCeEEEeccCCC-C---CHHHHHHHHhhCCCcccc---h---------------hhhhHHHHhcCC
Q psy11600 74 QNPQQWIEPMADANVDQYTFHVEPVD-N---VPQVIRQIKEAGMKVGQV---L---------------QDWIEPMADANV 131 (277)
Q Consensus 74 ~~p~~~i~~l~~ag~d~i~~H~e~~d-~---g~~~i~~i~~~~~~~~d~---p---------------~~~i~~~~~~g~ 131 (277)
.+++. +....+.|||+|-+=..... | +..+++++++....|+-+ | .+=+..+.++|+
T Consensus 9 ~s~~~-a~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~Ga 87 (256)
T 1twd_A 9 YSMEC-ALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGF 87 (256)
T ss_dssp SSHHH-HHHHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHH-HHHHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCC
Confidence 34443 34567789999944322212 2 888999999987766533 2 223456677777
Q ss_pred CeEEeecC-CCC--ChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHh
Q psy11600 132 DQYTFHVE-PVD--NVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRE 208 (277)
Q Consensus 132 d~it~H~E-~~~--~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~ 208 (277)
|-+-|-.= ++. +....-+++..++ ++. .++.-.| ....+-.+-++++.+
T Consensus 88 dGvV~G~Lt~dg~iD~~~~~~Li~~a~---~~~----------------------vTFHRAf---D~~~d~~~ale~L~~ 139 (256)
T 1twd_A 88 PGLVTGVLDVDGNVDMPRMEKIMAAAG---PLA----------------------VTFHRAF---DMCANPLYTLNNLAE 139 (256)
T ss_dssp SEEEECCBCTTSSBCHHHHHHHHHHHT---TSE----------------------EEECGGG---GGCSCHHHHHHHHHH
T ss_pred CEEEEeeECCCCCcCHHHHHHHHHHhC---CCc----------------------EEEECch---hccCCHHHHHHHHHH
Confidence 77777542 111 1223333333321 111 1221111 001122333555544
Q ss_pred hCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhh
Q psy11600 209 NYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 209 ~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
+ +++-.+ | -||+.-..+-++.+++|.++...++|.+=||||.+|++++.
T Consensus 140 l--G~~rIL-------T----------SG~~~~a~~g~~~L~~Lv~~a~~i~Im~GgGv~~~Ni~~l~ 188 (256)
T 1twd_A 140 L--GIARVL-------T----------SGQKSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFL 188 (256)
T ss_dssp H--TCCEEE-------E----------CTTSSSTTTTHHHHHHHHTSSSCCEEEEESSCCTTTHHHHH
T ss_pred c--CCCEEE-------C----------CCCCCCHHHHHHHHHHHHHhhCCcEEEecCCcCHHHHHHHH
Confidence 3 233221 1 13444445677888888765447889999999999998764
No 229
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=85.75 E-value=13 Score=34.10 Aligned_cols=117 Identities=15% Similarity=0.070 Sum_probs=76.1
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccc-------------------cC-------------------CCCCHHHHH
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFV-------------------PN-------------------LTFGHPVVK 56 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fv-------------------p~-------------------~~~g~~~v~ 56 (277)
-|.....+-+++.+++|++.+=++| |..+. +| -.+..+.|+
T Consensus 132 ~d~~~~~~l~~ra~~aG~~alvlTv-D~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~ 210 (352)
T 3sgz_A 132 SDWDFNKQMVQRAEALGFKALVITI-DTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLS 210 (352)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEC-SCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEe-CCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHH
Confidence 3566667778999999999887765 22111 11 124557899
Q ss_pred HHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEec--c-CCCCCH---HHHHHHHhhC--CCcccc------hhhh
Q psy11600 57 CLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHV--E-PVDNVP---QVIRQIKEAG--MKVGQV------LQDW 122 (277)
Q Consensus 57 ~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~--e-~~d~g~---~~i~~i~~~~--~~~~d~------p~~~ 122 (277)
++|+. +++|+-+-.- .++ +..+.+.++|+|.|.++- - ..++++ ..+.++++.. ..++-. +.+.
T Consensus 211 ~lr~~-~~~PvivK~v-~~~-e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv 287 (352)
T 3sgz_A 211 LLQSI-TRLPIILKGI-LTK-EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDV 287 (352)
T ss_dssp HHHHH-CCSCEEEEEE-CSH-HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHH
T ss_pred HHHHh-cCCCEEEEec-CcH-HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHH
Confidence 99986 7888877653 344 567888999999998842 2 124433 4455554432 233322 7888
Q ss_pred hHHHHhcCCCeEEe
Q psy11600 123 IEPMADANVDQYTF 136 (277)
Q Consensus 123 i~~~~~~g~d~it~ 136 (277)
++.++ +||+.+.+
T Consensus 288 ~kaLa-lGA~aV~i 300 (352)
T 3sgz_A 288 LKALA-LGARCIFL 300 (352)
T ss_dssp HHHHH-TTCSEEEE
T ss_pred HHHHH-cCCCEEEE
Confidence 88877 79988887
No 230
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=85.74 E-value=10 Score=38.35 Aligned_cols=74 Identities=11% Similarity=0.196 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhc---C----CCCeeeeeeeccCcH-HhHHHHHhcC-CCe
Q psy11600 20 LHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNK---I----PKAFFETHMMVQNPQ-QWIEPMADAN-VDQ 90 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~---~----~~~~~d~Hlmv~~p~-~~i~~l~~ag-~d~ 90 (277)
+.+.++.|.+.|++|+.+| |-.++.. ++++.++.+++. . ++.++.+|.--.+.. ..++.+.+.+ +|.
T Consensus 188 y~~~l~~L~~aG~~~VQiD--EP~L~~~--l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~G~~~~~~~~~l~~l~~vd~ 263 (765)
T 1u1j_A 188 YKEVITELKAAGATWIQLD--EPVLVMD--LEGQKLQAFTGAYAELESTLSGLNVLVETYFADIPAEAYKTLTSLKGVTA 263 (765)
T ss_dssp HHHHHHHHHHTTCCEEEEE--CGGGGSC--CCHHHHHHHHHHHHHSTTTTCSSEEEEECCSSCCCHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHHcCCCEEEEc--CCccccC--CCHHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCcchHHHHHHHcCCCCcE
Confidence 4677888999999998777 5445433 244444444322 2 456778888777877 7788888999 999
Q ss_pred EEEeccCCC
Q psy11600 91 YTFHVEPVD 99 (277)
Q Consensus 91 i~~H~e~~d 99 (277)
+ |+|..+
T Consensus 264 l--~lD~v~ 270 (765)
T 1u1j_A 264 F--GFDLVR 270 (765)
T ss_dssp E--EEESSS
T ss_pred E--EEEecC
Confidence 9 666544
No 231
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=85.62 E-value=2.3 Score=38.12 Aligned_cols=69 Identities=19% Similarity=0.177 Sum_probs=42.5
Q ss_pred hHHHHHhhCCCccEEEeCCCCcCcHHHHH---HccCCC-CCcccccCHHHHHHHHHh-hCCCCeEEEeCCCCccCHHHhh
Q psy11600 202 KVKWLRENYPTLNIEVDGGVGPNTIDECA---KCLTGF-GGQKFMQDMMPKVKWLRE-NYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 202 kI~~l~~~~~~~~i~vdGgV~~~tv~~~~---~~gpg~-ggq~F~~~~~~kI~~l~~-~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
-++.+++..+...++| ..+|.+++. ++|+++ -=-.|.+ +.+++..+ ..++..|++-||||++|++.++
T Consensus 188 Av~~ar~~~~~~~IeV----Ev~tl~ea~eAl~aGaD~I~LDn~~~---~~l~~av~~~~~~v~ieaSGGIt~~~i~~~a 260 (287)
T 3tqv_A 188 AVTKAKKLDSNKVVEV----EVTNLDELNQAIAAKADIVMLDNFSG---EDIDIAVSIARGKVALEVSGNIDRNSIVAIA 260 (287)
T ss_dssp HHHHHHHHCTTSCEEE----EESSHHHHHHHHHTTCSEEEEESCCH---HHHHHHHHHHTTTCEEEEESSCCTTTHHHHH
T ss_pred HHHHHHhhCCCCcEEE----EeCCHHHHHHHHHcCCCEEEEcCCCH---HHHHHHHHhhcCCceEEEECCCCHHHHHHHH
Confidence 3455565666666665 467776654 456663 1122333 34444333 2357889999999999999876
Q ss_pred C
Q psy11600 277 K 277 (277)
Q Consensus 277 ~ 277 (277)
+
T Consensus 261 ~ 261 (287)
T 3tqv_A 261 K 261 (287)
T ss_dssp T
T ss_pred H
Confidence 4
No 232
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=85.42 E-value=14 Score=32.84 Aligned_cols=57 Identities=16% Similarity=0.025 Sum_probs=35.8
Q ss_pred hHHHHHhcCCCeEEEeccCC-CC------------CHHHHHHHHhhCCCcccc---hhhhhHHHHhcCCCeEE
Q psy11600 79 WIEPMADANVDQYTFHVEPV-DN------------VPQVIRQIKEAGMKVGQV---LQDWIEPMADANVDQYT 135 (277)
Q Consensus 79 ~i~~l~~ag~d~i~~H~e~~-d~------------g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~g~d~it 135 (277)
..+.+.+.|||+|=+=.|.. .| -.++|+.+++....++.+ -.+.++.-.++|+++|-
T Consensus 43 ~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl~aGa~iIN 115 (282)
T 1aj0_A 43 HANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIIN 115 (282)
T ss_dssp HHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHHHcCCCEEE
Confidence 46777888999995555443 22 245666676655555443 45566666777888763
No 233
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=85.36 E-value=1.9 Score=36.78 Aligned_cols=114 Identities=10% Similarity=0.153 Sum_probs=71.5
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPV 98 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~ 98 (277)
+..+-++.+++.|+|++|+==+++.+- .-....+.+++++ . .++|+-+-=-+.++. .++.+.++|+|.+ |+-..
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~-~-~~ipvi~~Ggi~~~~-~~~~~~~~Gad~V--~lg~~ 104 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAIE-NSGENLPVLEKLS-E-FAEHIQIGGGIRSLD-YAEKLRKLGYRRQ--IVSSK 104 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHHH-CCCTTHHHHHHGG-G-GGGGEEEESSCCSHH-HHHHHHHTTCCEE--EECHH
T ss_pred CHHHHHHHHHHcCCCEEEEeccccccc-CCchhHHHHHHHH-h-cCCcEEEECCCCCHH-HHHHHHHCCCCEE--EECch
Confidence 556677888999999999732223221 1123467788887 5 567766644454554 5666778999999 54332
Q ss_pred C-CCHHHHHHHHhhCCC---cccc-----------------hhhhhHHHHhcCCCeEEeec
Q psy11600 99 D-NVPQVIRQIKEAGMK---VGQV-----------------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 99 d-~g~~~i~~i~~~~~~---~~d~-----------------p~~~i~~~~~~g~d~it~H~ 138 (277)
. ..|+.++.+++.... .+++ +.++++.+.++|++.|.+|.
T Consensus 105 ~l~~p~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~ 165 (241)
T 1qo2_A 105 VLEDPSFLKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTE 165 (241)
T ss_dssp HHHCTTHHHHHHTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEE
T ss_pred HhhChHHHHHHHHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEe
Confidence 1 135566677333311 1222 45677888899999999985
No 234
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=85.27 E-value=6.3 Score=37.90 Aligned_cols=62 Identities=8% Similarity=0.122 Sum_probs=34.8
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCC-------CHHHHHHHHhhCCC-------cccc-------hhhhhHHHHhcCCCe
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDN-------VPQVIRQIKEAGMK-------VGQV-------LQDWIEPMADANVDQ 133 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~-------g~~~i~~i~~~~~~-------~~d~-------p~~~i~~~~~~g~d~ 133 (277)
.+.+.++.+.+.+...+ ++--.+| -.++++.+...... .+-+ ..+.++.+.++|+|.
T Consensus 194 ~l~eal~~m~~~~i~~l--pVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~ 271 (511)
T 3usb_A 194 TLSEAEKILQKYKIEKL--PLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDA 271 (511)
T ss_dssp CHHHHHHHHHHHTCSEE--EEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHcCCCEE--EEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccce
Confidence 45667888888888877 3321222 34555555442111 1100 245566777788887
Q ss_pred EEeec
Q psy11600 134 YTFHV 138 (277)
Q Consensus 134 it~H~ 138 (277)
+.+..
T Consensus 272 I~Id~ 276 (511)
T 3usb_A 272 IVLDT 276 (511)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 77754
No 235
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=84.86 E-value=1.5 Score=38.59 Aligned_cols=171 Identities=11% Similarity=0.113 Sum_probs=100.3
Q ss_pred eeeeeeccCcHHhHHHHHhcC--CCeEEEeccCC-CCCHHHHHHHHhhCCC-cc-----cch---hhhhHHHHhcCCCeE
Q psy11600 67 FETHMMVQNPQQWIEPMADAN--VDQYTFHVEPV-DNVPQVIRQIKEAGMK-VG-----QVL---QDWIEPMADANVDQY 134 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~ag--~d~i~~H~e~~-d~g~~~i~~i~~~~~~-~~-----d~p---~~~i~~~~~~g~d~i 134 (277)
+-+=|=+.+.++.++.+.+.+ ++++=+|.+.. ..|+++++++|+.... .. |+| ..+++.+.++|+|++
T Consensus 30 LivALD~~~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~Lk~~g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~v 109 (255)
T 3ldv_A 30 VIVALDYDNLADALAFVDKIDPSTCRLKVGKEMFTLFGPDFVRELHKRGFSVFLDLKFHDIPNTCSKAVKAAAELGVWMV 109 (255)
T ss_dssp EEEEECCSSHHHHHHHHTTSCGGGCEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHHTTCSEE
T ss_pred eEEEcCCCCHHHHHHHHHHhCCcCcEEEeCHHHHHhhCHHHHHHHHhcCCCEEEEEecccchhHHHHHHHHHHhcCCCEE
Confidence 444455567777777666654 45777787753 4599999999987543 33 444 667889999999999
Q ss_pred EeecCCCCChHHHHHHHHH-h---CC--ccceeeCCCCCHHh---------------HHHHHh---hcCceEEEEecCCC
Q psy11600 135 TFHVEPVDNVPQVIRQIKE-A---GM--KVGLAIKPKTPVDV---------------IAEYIE---SADLVLIMTVEPGF 190 (277)
Q Consensus 135 t~H~E~~~~~~~~~~~I~~-~---g~--~~g~~i~p~t~~~~---------------i~~~i~---~~d~vl~mav~Pgt 190 (277)
|+|.- .-.+.++...+ . |. ...+|+-.-|+.+. +..+.+ ..+. .++...|
T Consensus 110 TVh~~---~G~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~-~GvV~sa-- 183 (255)
T 3ldv_A 110 NVHAS---GGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGL-DGVVCSA-- 183 (255)
T ss_dssp EEEGG---GCHHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTC-SEEECCH--
T ss_pred EEecc---CCHHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCC-CEEEECH--
Confidence 99985 22333332222 1 11 12345444444431 111111 1111 1111111
Q ss_pred CCchhhhhhhhhHHHHHhhC-CCccEEEeCCCCc-----------CcHHHHHHccCCC---CCcccc-cCHHHHHHHHHh
Q psy11600 191 GGQKFMQDMMPKVKWLRENY-PTLNIEVDGGVGP-----------NTIDECAKCLTGF---GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 191 ~gq~~~~~~l~kI~~l~~~~-~~~~i~vdGgV~~-----------~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~ 254 (277)
..++.+|+.. +++ +.|-+||.. +|..++.++|+++ |...|. ++..+.++++++
T Consensus 184 ----------~e~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~ 252 (255)
T 3ldv_A 184 ----------QEASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEINS 252 (255)
T ss_dssp ----------HHHHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHH
T ss_pred ----------HHHHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCCHHHHHHHHHH
Confidence 1355555543 345 445577754 5788899999997 777777 477888887775
No 236
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=84.74 E-value=1.3 Score=39.27 Aligned_cols=92 Identities=12% Similarity=0.052 Sum_probs=64.4
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHH-HHHHHHhcC--CCCeeeeeeeccCcHHhHHH-H
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHP-VVKCLRNKI--PKAFFETHMMVQNPQQWIEP-M 83 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~-~v~~l~~~~--~~~~~d~Hlmv~~p~~~i~~-l 83 (277)
+=++++|..+.++.++.+++.+ ++ +++.- -.|. ..+|++ .++.|++.. +++++-.+++..|..+.+.. +
T Consensus 31 ~LiVALD~~~~~~al~l~~~l~-~~--v~~~KvG~~l~--~~~G~~~~v~~L~~l~~~~g~~IflDlK~~DIpnTv~~~y 105 (267)
T 3gdm_A 31 NLCASLDVRTTKELLELVEALG-PK--ICLLKTHVDIL--TDFSMEGTVKPLKALSAKYNFLLFEDRRFADIGNTVKLQY 105 (267)
T ss_dssp CEEEECCCSCHHHHHHHHHHHG-GG--CSEEEECGGGC--SSCCTTTTHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHhC-Cc--CcEEEECHHHH--HhcCHHHHHHHHHHHHhhcCCeEEEEeccccchHHHHHHH
Confidence 4467899999999888888763 33 45555 2233 358988 888877521 57899999999998888764 2
Q ss_pred -------HhcCCCeEEEeccCCCCCHHHHHHHHh
Q psy11600 84 -------ADANVDQYTFHVEPVDNVPQVIRQIKE 110 (277)
Q Consensus 84 -------~~ag~d~i~~H~e~~d~g~~~i~~i~~ 110 (277)
.+ ++|++|+|.- +|+..+++.++
T Consensus 106 ~~a~~~~~~-~ad~vTVH~~---~G~~~~~aa~~ 135 (267)
T 3gdm_A 106 SAGVYRIAE-WADITNAHGV---VGPGIVSGLKQ 135 (267)
T ss_dssp HSTTTCHHH-HCSEEEEEGG---GCTHHHHHHHH
T ss_pred HHHHHHHHh-hCCEEEEecc---CCHHHHHHHHH
Confidence 23 4799999963 45566666554
No 237
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=84.71 E-value=7.3 Score=34.51 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=38.7
Q ss_pred HHHHHHHcCCCEEEEeccc-ccc-----ccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 23 ESQNLLDSGADYLHLDVMD-GTF-----VPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 23 ~~~~l~~~~~~~~h~DimD-g~f-----vp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
-++.|.+.|+++ ++ |.| +|.+.-....++.+++ .++.++.+.+ .+ .+.++...++|++++++
T Consensus 32 i~~~L~~~Gv~~-----IE~g~~~~~~~~p~~~d~~~~~~~~~~-~~~~~~~~l~--~~-~~~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 32 LIDMLSEAGLSV-----IETTSFVSPKWVPQMGDHTEVLKGIQK-FPGINYPVLT--PN-LKGFEAAVAAGAKEVVI 99 (298)
T ss_dssp HHHHHHHTTCSE-----ECCEECCCTTTCGGGTTHHHHHHHSCC-CTTCBCCEEC--CS-HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCcCE-----EEECCCcCcccccccCCHHHHHHHHhh-CCCCEEEEEc--CC-HHhHHHHHHCCCCEEEE
Confidence 355677777665 45 444 4544322345666665 4676666533 34 45688999999999955
No 238
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=84.53 E-value=3.3 Score=38.67 Aligned_cols=118 Identities=13% Similarity=0.136 Sum_probs=70.6
Q ss_pred cHHHHHHHHHHcCCCEEEEecccc--------------------ccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC---
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDG--------------------TFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN--- 75 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg--------------------~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~--- 75 (277)
.+.+..++++++|.|.+-+..--| .+-....|-.++|+++|+.++.-++-+-|-..+
T Consensus 172 ~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~ 251 (402)
T 2hsa_B 172 DYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHL 251 (402)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCST
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccC
Confidence 556677788889999944433211 111123344688999998865336666554321
Q ss_pred ----------cHHhHHHHHhcC------CCeEEEeccCCCC-----------C---HHHHHHHHhhCCCcccc-----hh
Q psy11600 76 ----------PQQWIEPMADAN------VDQYTFHVEPVDN-----------V---PQVIRQIKEAGMKVGQV-----LQ 120 (277)
Q Consensus 76 ----------p~~~i~~l~~ag------~d~i~~H~e~~d~-----------g---~~~i~~i~~~~~~~~d~-----p~ 120 (277)
..+.++.+.++| +|++++|.-..+. + ..+++.+|+....|+-. |+
T Consensus 252 g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i~~~ 331 (402)
T 2hsa_B 252 DAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYTRE 331 (402)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSCCHH
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCCCHH
Confidence 233477888899 9999888432110 1 24577788876655432 55
Q ss_pred hhhHHHHhcCCCeEEe
Q psy11600 121 DWIEPMADANVDQYTF 136 (277)
Q Consensus 121 ~~i~~~~~~g~d~it~ 136 (277)
...+.+.+-+||.|.|
T Consensus 332 ~a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 332 LGIEAVAQGDADLVSY 347 (402)
T ss_dssp HHHHHHHTTSCSEEEE
T ss_pred HHHHHHHCCCCceeee
Confidence 4444444444899888
No 239
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=84.43 E-value=14 Score=32.10 Aligned_cols=121 Identities=13% Similarity=0.145 Sum_probs=73.2
Q ss_pred eee--ccccCcccHHHHHHHHHHcCCCEEEEec-cccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHh
Q psy11600 9 GPS--ILNSDLSNLHSESQNLLDSGADYLHLDV-MDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMAD 85 (277)
Q Consensus 9 ~~s--~~~~d~~~l~~~~~~l~~~~~~~~h~Di-mDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ 85 (277)
||| .+.-|+ +..+-.+..++. +.. +-| -|..|. .=+...++++|+. .++|+..-=.+-++. ++.....
T Consensus 51 SPSkG~i~~~~-~~~~iA~~y~~~-A~~--IsVlTd~~~F---~gs~~dL~~ir~~-v~lPvLrKDfi~~~~-qi~ea~~ 121 (251)
T 1i4n_A 51 SPSAGDINADA-SLEDFIRMYDEL-ADA--ISILTEKHYF---KGDPAFVRAARNL-TCRPILAKDFYIDTV-QVKLASS 121 (251)
T ss_dssp CSSSCBSCTTC-CHHHHHHHHHHH-CSE--EEEECCCSSS---CCCTHHHHHHHTT-CCSCEEEECCCCSTH-HHHHHHH
T ss_pred CCCCCccCCCC-CHHHHHHHHHHh-CCc--eEEEeccccc---CCCHHHHHHHHHh-CCCCEEEeeCCCCHH-HHHHHHH
Confidence 666 233322 444444445554 555 444 466663 2366889999985 788887655666676 4666889
Q ss_pred cCCCeEEEeccCCCC--CHHHHHHHHhhCCC-cccc-hhhhhHHHHhc-CCCeEEeec
Q psy11600 86 ANVDQYTFHVEPVDN--VPQVIRQIKEAGMK-VGQV-LQDWIEPMADA-NVDQYTFHV 138 (277)
Q Consensus 86 ag~d~i~~H~e~~d~--g~~~i~~i~~~~~~-~~d~-p~~~i~~~~~~-g~d~it~H~ 138 (277)
+|||.+.+-.-..+. -..+++..++.+.. .+++ -.+=++...++ |+++|.++.
T Consensus 122 ~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 122 VGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINT 179 (251)
T ss_dssp TTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEEC
T ss_pred cCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeC
Confidence 999999766554331 23344444444433 2333 22225666778 999999875
No 240
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=84.29 E-value=18 Score=32.25 Aligned_cols=105 Identities=8% Similarity=-0.020 Sum_probs=69.4
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEec-
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHV- 95 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~- 95 (277)
...+.+.++.+.+.|+|.+++..-+ | .+.++.+++. ++++-. .+.++. ......++|+|.+.++-
T Consensus 82 ~~~~~~~~~~~~~~g~d~V~~~~g~----p-----~~~~~~l~~~--gi~vi~--~v~t~~-~a~~~~~~GaD~i~v~g~ 147 (328)
T 2gjl_A 82 PVPYAEYRAAIIEAGIRVVETAGND----P-----GEHIAEFRRH--GVKVIH--KCTAVR-HALKAERLGVDAVSIDGF 147 (328)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEEESC----C-----HHHHHHHHHT--TCEEEE--EESSHH-HHHHHHHTTCSEEEEECT
T ss_pred CccHHHHHHHHHhcCCCEEEEcCCC----c-----HHHHHHHHHc--CCCEEe--eCCCHH-HHHHHHHcCCCEEEEECC
Confidence 3457789999999999998876421 2 6888999874 555543 345554 56677889999998752
Q ss_pred cCC--C-----CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEe
Q psy11600 96 EPV--D-----NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 96 e~~--d-----~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~ 136 (277)
+.. . .....++++++....|+-+ |++..+.+ ++|||.+.+
T Consensus 148 ~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al-~~GAdgV~v 200 (328)
T 2gjl_A 148 ECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAAL-ALGADAINM 200 (328)
T ss_dssp TCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HHTCSEEEE
T ss_pred CCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEE
Confidence 211 0 1345778887766555533 55554444 479998876
No 241
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=84.28 E-value=9.9 Score=34.41 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=56.1
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccC--CCCC------HHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCC
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPN--LTFG------HPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANV 88 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~--~~~g------~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~ 88 (277)
....-+..+++.+.|+|. +||==-..=|+ ++-. .+.|+.+++.++++++.++ +.+++ .++...++|+
T Consensus 64 ~~~a~~~A~~~v~~GAdI--IDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISID--T~~~~-VaeaAl~aGa 138 (318)
T 2vp8_A 64 DAAARDAVHRAVADGADV--IDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVD--TWRAQ-VAKAACAAGA 138 (318)
T ss_dssp CHHHHHHHHHHHHTTCSE--EEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEE--CSCHH-HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCCE--EEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEe--CCCHH-HHHHHHHhCC
Confidence 334444556677789999 78752111122 1111 2347777876568887664 44554 4556666799
Q ss_pred CeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecC
Q psy11600 89 DQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 89 d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E 139 (277)
++| -|+.-+ . -...++..+++|+.+|.+|..
T Consensus 139 ~iI---NDVsg~----------------~-d~~m~~vaa~~g~~vVlmh~~ 169 (318)
T 2vp8_A 139 DLI---NDTWGG----------------V-DPAMPEVAAEFGAGLVCAHTG 169 (318)
T ss_dssp CEE---EETTSS----------------S-STTHHHHHHHHTCEEEEECC-
T ss_pred CEE---EECCCC----------------C-chHHHHHHHHhCCCEEEECCC
Confidence 988 233211 0 124566778999999999974
No 242
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=84.12 E-value=4.3 Score=38.70 Aligned_cols=112 Identities=21% Similarity=0.309 Sum_probs=68.5
Q ss_pred HHHHHHcCCCEEEEecccc-ccccCCCC---C-HHHHHHHHhcCCCCeeeeeeeccC-------c----HHhHHHHHhcC
Q psy11600 24 SQNLLDSGADYLHLDVMDG-TFVPNLTF---G-HPVVKCLRNKIPKAFFETHMMVQN-------P----QQWIEPMADAN 87 (277)
Q Consensus 24 ~~~l~~~~~~~~h~DimDg-~fvp~~~~---g-~~~v~~l~~~~~~~~~d~Hlmv~~-------p----~~~i~~l~~ag 87 (277)
++.|.+.|+++ +.+--| +|+.++.| . .+.++.+++..|+.++.+.+-..| | ...++...++|
T Consensus 36 a~~L~~~Gv~~--IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~G 113 (464)
T 2nx9_A 36 AQQLDQIGYWS--LECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNG 113 (464)
T ss_dssp HHHHHTSCCSE--EEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCE--EEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCC
Confidence 34566678887 444221 14433222 2 367888888778877776653222 2 34578888999
Q ss_pred CCeEEEeccCCCC--CHHHHHHHHhhCCCc---c---cc----h---hhhhHHHHhcCCCeEEee
Q psy11600 88 VDQYTFHVEPVDN--VPQVIRQIKEAGMKV---G---QV----L---QDWIEPMADANVDQYTFH 137 (277)
Q Consensus 88 ~d~i~~H~e~~d~--g~~~i~~i~~~~~~~---~---d~----p---~~~i~~~~~~g~d~it~H 137 (277)
++.+++-.-..+. ....++.+|+.+..+ + +- | .+.++.+.++||+.|++-
T Consensus 114 vd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~ 178 (464)
T 2nx9_A 114 MDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALK 178 (464)
T ss_dssp CCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 9999544322332 456777778776542 1 11 3 445577889999999884
No 243
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=83.96 E-value=6.5 Score=33.90 Aligned_cols=171 Identities=18% Similarity=0.240 Sum_probs=0.0
Q ss_pred eeeccCcHH-----hHHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhhCCCcccc-hhhhhHHHHhcCCCeEEeec
Q psy11600 70 HMMVQNPQQ-----WIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEAGMKVGQV-LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 70 Hlmv~~p~~-----~i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~~~~~~d~-p~~~i~~~~~~g~d~it~H~ 138 (277)
|+..-+|.+ .++.+.++|+|.| -+--.+| ..++++++|+ +..|+-. |-. .+.+.. |+|.+.|-.
T Consensus 9 h~~~iDPdk~~~~~~~~~~~~~GtD~i--~vGGs~gvt~~~~~~~v~~ik~-~~~Pvvlfp~~-~~~v~~-gaD~~l~ps 83 (228)
T 3vzx_A 9 HVFKLDPNKDLPDEQLEILCESGTDAV--IIGGSDGVTEDNVLRMMSKVRR-FLVPCVLEVSA-IEAIVP-GFDLYFIPS 83 (228)
T ss_dssp EEEEECTTSCCCTTHHHHHHTSSCSEE--EECCCSCCCHHHHHHHHHHHTT-SSSCEEEECSC-GGGCCS-CCSEEEEEE
T ss_pred EEEeECCCCCCCHHHHHHHHHcCCCEE--EECCcCCCCHHHHHHHHHHhhc-cCCCEEEeCCC-HHHccc-cCCEEEEee
Q ss_pred CCCCChHHHH-----HHHHHhCC-----ccce----eeCCCCCH------------HhHHHHHhhc-----CceEEEEec
Q psy11600 139 EPVDNVPQVI-----RQIKEAGM-----KVGL----AIKPKTPV------------DVIAEYIESA-----DLVLIMTVE 187 (277)
Q Consensus 139 E~~~~~~~~~-----~~I~~~g~-----~~g~----~i~p~t~~------------~~i~~~i~~~-----d~vl~mav~ 187 (277)
=+-..-...+ +.+++.|. ..=- -++|+++. +.+..|.... +++-.-+
T Consensus 84 lln~~~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~-- 161 (228)
T 3vzx_A 84 VLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY-- 161 (228)
T ss_dssp ETTBSSGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC--
T ss_pred ecCCCCcchhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecC--
Q ss_pred CCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCC-CcCcHHHHHHccCCC---CCcccc-cCHHHHHHHHHh
Q psy11600 188 PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKCLTGF---GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 188 Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV-~~~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~ 254 (277)
-|+.+. .+.++++++....+-+.+=||| +.++++++. .|++. |+.... ++..++.-+.-+
T Consensus 162 sG~~~~------~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 162 SGVLGD------IEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDRALKTVAAVK 226 (228)
T ss_dssp TTSCCC------HHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHHHHHHHHHHH
T ss_pred CCCcCC------HHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHHHHHHHHHHh
No 244
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=83.95 E-value=18 Score=30.37 Aligned_cols=89 Identities=9% Similarity=0.080 Sum_probs=52.5
Q ss_pred CCceEeeeccccCcccHHHHHHHHHHcCCCEEEEecccccccc--------CCCCCHHHHHHHHhcC--CCCeeeeeeec
Q psy11600 4 VQCMIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVP--------NLTFGHPVVKCLRNKI--PKAFFETHMMV 73 (277)
Q Consensus 4 ~~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp--------~~~~g~~~v~~l~~~~--~~~~~d~Hlmv 73 (277)
.+++|+-|.++.-...+.+.++.+.+.|.+. +.+.-....+ ...+.+..++++|+.. .++.+..|-..
T Consensus 8 ~~mklg~~~~~~~~~~~~~~l~~~~~~G~~~--vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~ 85 (262)
T 3p6l_A 8 NGWRLGMQSYSFHLFPLTEALDKTQELGLKY--IEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY 85 (262)
T ss_dssp TTEEEEEEGGGGTTSCHHHHHHHHHHTTCCE--EEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCcEEEEEecccCCCCHHHHHHHHHHcCCCE--EeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc
Confidence 3578999999987789999999999999999 4444322100 1234444444444321 35555444322
Q ss_pred c-----CcHHhHHHHHhcCCCeEEEe
Q psy11600 74 Q-----NPQQWIEPMADANVDQYTFH 94 (277)
Q Consensus 74 ~-----~p~~~i~~l~~ag~d~i~~H 94 (277)
. +..+.++...+.|++++.+|
T Consensus 86 ~~~~~~~~~~~i~~A~~lGa~~v~~~ 111 (262)
T 3p6l_A 86 VAEKSSDWEKMFKFAKAMDLEFITCE 111 (262)
T ss_dssp CCSSTTHHHHHHHHHHHTTCSEEEEC
T ss_pred CCccHHHHHHHHHHHHHcCCCEEEec
Confidence 1 23334555555666666666
No 245
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=83.84 E-value=2.1 Score=42.26 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=71.9
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccc------cc-c---------------CCCCCHHHHHHHHhcCC-CCeeeeeeecc-
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGT------FV-P---------------NLTFGHPVVKCLRNKIP-KAFFETHMMVQ- 74 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~------fv-p---------------~~~~g~~~v~~l~~~~~-~~~~d~Hlmv~- 74 (277)
.+.+..++++++|.|. ++|-=++ |. | ...|-.++++++|+..+ +.++-+-|-..
T Consensus 142 ~~~~aA~~a~~aGfd~--veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~ 219 (671)
T 1ps9_A 142 NFARCAQLAREAGYDG--VEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD 219 (671)
T ss_dssp HHHHHHHHHHHTTCSE--EEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCE--EEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccc
Confidence 4566777788899999 4543222 11 2 12334788999998753 66665533221
Q ss_pred ---------CcHHhHHHHHhcCCCeEEEec---cCC-C---------CCHHHHHHHHhhCCCcccc------hhhhhHHH
Q psy11600 75 ---------NPQQWIEPMADANVDQYTFHV---EPV-D---------NVPQVIRQIKEAGMKVGQV------LQDWIEPM 126 (277)
Q Consensus 75 ---------~p~~~i~~l~~ag~d~i~~H~---e~~-d---------~g~~~i~~i~~~~~~~~d~------p~~~i~~~ 126 (277)
+..+.++.+.++|+|++++|. +.. . .....++.+|+....|+-. |++..+.+
T Consensus 220 ~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l 299 (671)
T 1ps9_A 220 LVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDIL 299 (671)
T ss_dssp CSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHH
Confidence 223457788899999998873 210 0 1246788888887665532 55554444
Q ss_pred HhcCCCeEEee
Q psy11600 127 ADANVDQYTFH 137 (277)
Q Consensus 127 ~~~g~d~it~H 137 (277)
.+-+||.|.|=
T Consensus 300 ~~g~aD~V~~g 310 (671)
T 1ps9_A 300 SRGDADMVSMA 310 (671)
T ss_dssp HTTSCSEEEES
T ss_pred HcCCCCEEEeC
Confidence 44449999984
No 246
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=83.58 E-value=18 Score=32.43 Aligned_cols=118 Identities=8% Similarity=0.085 Sum_probs=72.7
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCC-------C----HHHHHHHHhcCCCCeeeeeeec---cCcHH---
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTF-------G----HPVVKCLRNKIPKAFFETHMMV---QNPQQ--- 78 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~-------g----~~~v~~l~~~~~~~~~d~Hlmv---~~p~~--- 78 (277)
+..+..+.++++++.|+..+| |-|+.+.+.-+. . -..|+..++.-+++.+-+=-=. ...++
T Consensus 102 ~~~~v~~~v~~l~~aGaagv~--iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~ 179 (305)
T 3ih1_A 102 GVLNVARTAVEMVEAKVAAVQ--IEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIE 179 (305)
T ss_dssp SHHHHHHHHHHHHHTTCSEEE--EECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCcEEE--ECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHH
Confidence 344667788899999999977 667766432211 1 2345555554233332221111 01223
Q ss_pred hHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc--------hhhhhHHHHhcCCCeEEeec
Q psy11600 79 WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV--------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 79 ~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~--------p~~~i~~~~~~g~d~it~H~ 138 (277)
-.+.+.++|||.+.++ ... .+..++.+.+....|+-+ |.--.++|.+.|+..|++..
T Consensus 180 Ra~ay~eAGAD~i~~e--~~~-~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~ 244 (305)
T 3ih1_A 180 RANAYVKAGADAIFPE--ALQ-SEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPV 244 (305)
T ss_dssp HHHHHHHHTCSEEEET--TCC-SHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECS
T ss_pred HHHHHHHcCCCEEEEc--CCC-CHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEch
Confidence 3556788999999655 332 467788887776655531 44457999999999999975
No 247
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=83.46 E-value=9.7 Score=36.04 Aligned_cols=72 Identities=10% Similarity=0.053 Sum_probs=44.0
Q ss_pred CCe-eeeeeecc----CcHHhHHHHHhcCCCeEEEeccCC-----------CC---C-------HHHHHHHHhhC--CCc
Q psy11600 64 KAF-FETHMMVQ----NPQQWIEPMADANVDQYTFHVEPV-----------DN---V-------PQVIRQIKEAG--MKV 115 (277)
Q Consensus 64 ~~~-~d~Hlmv~----~p~~~i~~l~~ag~d~i~~H~e~~-----------d~---g-------~~~i~~i~~~~--~~~ 115 (277)
++| +.+=+-.. +..+..+.+.++|+|.|++|--.. .+ | ..+++++++.. ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 556 55554322 233347788899999999885321 11 3 25688888876 445
Q ss_pred ccc------hhhhhHHHHhcCCCeEEe
Q psy11600 116 GQV------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 116 ~d~------p~~~i~~~~~~g~d~it~ 136 (277)
+-. +++..+.+ .+|||.|-+
T Consensus 376 VIg~GGI~s~~DA~e~l-~aGAd~Vqi 401 (443)
T 1tv5_A 376 IIASGGIFSGLDALEKI-EAGASVCQL 401 (443)
T ss_dssp EEEESSCCSHHHHHHHH-HTTEEEEEE
T ss_pred EEEECCCCCHHHHHHHH-HcCCCEEEE
Confidence 422 66655555 478888776
No 248
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=83.41 E-value=1.6 Score=40.42 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=63.3
Q ss_pred hhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHh--CCccceeeCCCCCHHhHHHHHh-hcCceEEEEecCCCCCc
Q psy11600 120 QDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEA--GMKVGLAIKPKTPVDVIAEYIE-SADLVLIMTVEPGFGGQ 193 (277)
Q Consensus 120 ~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~--g~~~g~~i~p~t~~~~i~~~i~-~~d~vl~mav~Pgt~gq 193 (277)
.++++.+.++|+|.|++|.... ... +.++.+++. +.....+ +.. +.+....+.+ -+|.+.+ +..||....
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G-~~~~~~e~I~~ir~~~~~~~Vi~G-~V~-T~e~A~~a~~aGaD~I~V-g~g~G~~~~ 177 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHA-HAKYVGKTLKSLRQLLGSRCIMAG-NVA-TYAGADYLASCGADIIKA-GIGGGSVCS 177 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCC-SSHHHHHHHHHHHHHHTTCEEEEE-EEC-SHHHHHHHHHTTCSEEEE-CCSSSSCHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCC-CcHhHHHHHHHHHHhcCCCeEEEc-CcC-CHHHHHHHHHcCCCEEEE-cCCCCcCcc
Confidence 5678999999999999975311 222 455666654 3222221 233 3444444443 3777765 666654210
Q ss_pred h-----hhhhhhhhHHHHHhhCCCccEEEeCCCC-cCcHHHHHHccCCC
Q psy11600 194 K-----FMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKCLTGF 236 (277)
Q Consensus 194 ~-----~~~~~l~kI~~l~~~~~~~~i~vdGgV~-~~tv~~~~~~gpg~ 236 (277)
. +-.+.+..|.++.+... .+..||||. ...+..+.++|++.
T Consensus 178 tr~~~g~g~p~l~aI~~~~~~~~--PVIAdGGI~~~~di~kALa~GAd~ 224 (361)
T 3r2g_A 178 TRIKTGFGVPMLTCIQDCSRADR--SIVADGGIKTSGDIVKALAFGADF 224 (361)
T ss_dssp HHHHHCCCCCHHHHHHHHTTSSS--EEEEESCCCSHHHHHHHHHTTCSE
T ss_pred ccccCCccHHHHHHHHHHHHhCC--CEEEECCCCCHHHHHHHHHcCCCE
Confidence 0 00113344444433222 788999995 67788888889885
No 249
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=83.39 E-value=5.2 Score=35.79 Aligned_cols=128 Identities=13% Similarity=0.164 Sum_probs=94.9
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeee---------------ecc
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHM---------------MVQ 74 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hl---------------mv~ 74 (277)
|=.+..|-..-.+.+.+..+.|..++=+|--.-+|-.|+...-++++.-++. ++.+++=| ...
T Consensus 82 PValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~--gvsVEaElG~vgG~Ed~~~~~~~~yT 159 (288)
T 3q94_A 82 PVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHAR--NVSVEAELGTVGGQEDDVIAEGVIYA 159 (288)
T ss_dssp CEEEEEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTT--TCEEEEEESBCBCSCSSCGGGGCBCC
T ss_pred cEEEECCCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHc--CCeEEEEeeeeccccCCcCCccccCC
Confidence 4456667775556777777789999888887777888888888888877753 55555421 356
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecC
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E 139 (277)
+|++-.+.+.+.|+|++.+=+-..-| -++.+++|++....|+-+ |++-+...+++|+.-|-+..|
T Consensus 160 ~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Td 238 (288)
T 3q94_A 160 DPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVNTE 238 (288)
T ss_dssp CHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTTEEEEEECHH
T ss_pred CHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChH
Confidence 89888887778999999665443322 788999999987665432 999999999999988888554
No 250
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=83.37 E-value=2.7 Score=36.47 Aligned_cols=111 Identities=12% Similarity=0.018 Sum_probs=62.2
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC--CCCeeeeeeec--------cCc---HHhHHHHHhcC
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI--PKAFFETHMMV--------QNP---QQWIEPMADAN 87 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~--~~~~~d~Hlmv--------~~p---~~~i~~l~~ag 87 (277)
.++++.+.+.|++.+=+.+.+|..- ...-.+.++++++.. -++++.+-... .++ .+..+...++|
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~--~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~G 179 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDE--DWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELG 179 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTT--HHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCC--HHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcC
Confidence 4677778889999964455565321 000001222332210 14555543210 122 22236778899
Q ss_pred CCeEEEeccCCCCCHHHHHHHHhhCCCcccc--------hhhh---hHHHHhcCCCeEEe
Q psy11600 88 VDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV--------LQDW---IEPMADANVDQYTF 136 (277)
Q Consensus 88 ~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~--------p~~~---i~~~~~~g~d~it~ 136 (277)
+|++.+++ ..+++.++++++....|+-. ++++ +..+.++|++.+.+
T Consensus 180 ad~i~~~~---~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 180 ADIVKTSY---TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp CSEEEECC---CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCEEEECC---CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 99999985 35788899998876555432 2232 45555778877765
No 251
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=83.21 E-value=15 Score=36.85 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCCCEEEEecccc-cc---ccCCCCCH-HHHHHHHhcCCCCeeeeeeecc-------Cc----HHhHHHHH
Q psy11600 21 HSESQNLLDSGADYLHLDVMDG-TF---VPNLTFGH-PVVKCLRNKIPKAFFETHMMVQ-------NP----QQWIEPMA 84 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg-~f---vp~~~~g~-~~v~~l~~~~~~~~~d~Hlmv~-------~p----~~~i~~l~ 84 (277)
-+-.+.|.+.|+++.++.+-=| +| .|-.+-+| +.++.+++..|+.++-.++-.. .| ...++...
T Consensus 128 l~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~~i~~a~ 207 (718)
T 3bg3_A 128 KKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFKFCEVAK 207 (718)
T ss_dssp HHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHcccchHHHHhcccccccccccCCcchHHHHHHHH
Confidence 3445556666666544554211 21 11123355 6788999888888876666331 22 34678888
Q ss_pred hcCCCeEEEec
Q psy11600 85 DANVDQYTFHV 95 (277)
Q Consensus 85 ~ag~d~i~~H~ 95 (277)
++|++.+++..
T Consensus 208 ~~Gvd~irIf~ 218 (718)
T 3bg3_A 208 ENGMDVFRVFD 218 (718)
T ss_dssp HHTCCEEEEEC
T ss_pred hcCcCEEEEEe
Confidence 89999986653
No 252
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=83.17 E-value=8.4 Score=35.52 Aligned_cols=67 Identities=15% Similarity=0.133 Sum_probs=37.6
Q ss_pred HHHHHHHHcCCCEEEEeccccccccCCCCCH---HHHHHHHhcCCCCeeeeeeeccCcHHhHHHH----HhcCCCeEEEe
Q psy11600 22 SESQNLLDSGADYLHLDVMDGTFVPNLTFGH---PVVKCLRNKIPKAFFETHMMVQNPQQWIEPM----ADANVDQYTFH 94 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~---~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l----~~ag~d~i~~H 94 (277)
+-++.|.+.|+++ ++..| |- .++ +.++++++..++..+-+..-. +. +.++.. ..+|++.+++.
T Consensus 38 ~ia~~L~~~Gv~~-----IE~g~-p~--~~~~d~e~v~~i~~~~~~~~i~~l~r~-~~-~di~~a~~al~~ag~~~v~if 107 (370)
T 3rmj_A 38 RVARQLEKLGVDI-----IEAGF-AA--ASPGDFEAVNAIAKTITKSTVCSLSRA-IE-RDIRQAGEAVAPAPKKRIHTF 107 (370)
T ss_dssp HHHHHHHHHTCSE-----EEEEE-GG--GCHHHHHHHHHHHTTCSSSEEEEEEES-SH-HHHHHHHHHHTTSSSEEEEEE
T ss_pred HHHHHHHHcCCCE-----EEEeC-CC--CCHHHHHHHHHHHHhCCCCeEEEEecC-CH-HHHHHHHHHHhhCCCCEEEEE
Confidence 3344566677776 44223 22 233 677888777677766655422 32 234444 34899999665
Q ss_pred ccCC
Q psy11600 95 VEPV 98 (277)
Q Consensus 95 ~e~~ 98 (277)
.-+.
T Consensus 108 ~~~S 111 (370)
T 3rmj_A 108 IATS 111 (370)
T ss_dssp EECS
T ss_pred ecCc
Confidence 4333
No 253
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=83.12 E-value=11 Score=33.48 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=57.6
Q ss_pred CHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC--CHHHHHHHHhhCCCcc--cc--hhhhhH
Q psy11600 51 GHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN--VPQVIRQIKEAGMKVG--QV--LQDWIE 124 (277)
Q Consensus 51 g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~--g~~~i~~i~~~~~~~~--d~--p~~~i~ 124 (277)
..+-|.-||+. -. .-.-||-+......++|||.||+|.-.--- -..-++.+|+....++ ++ -+++++
T Consensus 37 NIDhVAtLRnA-Rg------~~~PDpv~aA~~ae~aGAdGITvHlReDrRHI~d~Dv~~L~~~i~t~lNlEma~t~emi~ 109 (278)
T 3gk0_A 37 NIDHVATLRNA-RG------TAYPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRVKTRMNLECAVTPEMLD 109 (278)
T ss_dssp ECHHHHHHHHH-HS------SSCSCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHHCSSCEEEEECSSHHHHH
T ss_pred chHhhhhhhcc-CC------CCCCCHHHHHHHHHHcCCCEEEeccCCCcccCCHHHHHHHHHHcCCCEEeecCCCHHHHH
Confidence 44556666643 11 123367777888889999999999764211 4566888888765544 33 477889
Q ss_pred HHHhcCCCeEEeecC
Q psy11600 125 PMADANVDQYTFHVE 139 (277)
Q Consensus 125 ~~~~~g~d~it~H~E 139 (277)
...+..++.+|+=+|
T Consensus 110 ial~~kP~~vtLVPE 124 (278)
T 3gk0_A 110 IACEIRPHDACLVPE 124 (278)
T ss_dssp HHHHHCCSEEEECCC
T ss_pred HHHHcCCCEEEECCC
Confidence 899999999999888
No 254
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=82.83 E-value=4.1 Score=37.59 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=60.4
Q ss_pred eeCCCCCHHhHHHHHhh--cCceEEEEecCC-----CCCchhhhhhhhhHHHHHhhCCCccEEEeCC---CCcCcHHHHH
Q psy11600 161 AIKPKTPVDVIAEYIES--ADLVLIMTVEPG-----FGGQKFMQDMMPKVKWLRENYPTLNIEVDGG---VGPNTIDECA 230 (277)
Q Consensus 161 ~i~p~t~~~~i~~~i~~--~d~vl~mav~Pg-----t~gq~~~~~~l~kI~~l~~~~~~~~i~vdGg---V~~~tv~~~~ 230 (277)
.+++..+.+.....++. +|. +.+.+||. ..|..-....++.|+++++.. ++-+.+-+- .+.+.+..+.
T Consensus 150 nig~~~~~e~~~~~ve~~~ada-l~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~-~~PVivK~vg~g~s~e~A~~l~ 227 (365)
T 3sr7_A 150 NIGLDKPYQAGLQAVRDLQPLF-LQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL-QLPFILKEVGFGMDVKTIQTAI 227 (365)
T ss_dssp EEETTSCHHHHHHHHHHHCCSC-EEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC-CSCEEEEECSSCCCHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHhcCCCE-EEEeccccccccCCCCCCcHHHHHHHHHHHHHhh-CCCEEEEECCCCCCHHHHHHHH
Confidence 44555666555555443 333 33566652 122222345667888888764 455555532 4667788899
Q ss_pred HccCCC------CCccc-----------------ccCHHHHHHHHHhhCCCCeEEEeCCCCc
Q psy11600 231 KCLTGF------GGQKF-----------------MQDMMPKVKWLRENYPTLNIEVDGGVGP 269 (277)
Q Consensus 231 ~~gpg~------ggq~F-----------------~~~~~~kI~~l~~~~~~~~I~VDGGI~~ 269 (277)
++|+++ ||..| ......-+.+.+...+++.|-+||||.-
T Consensus 228 ~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~ 289 (365)
T 3sr7_A 228 DLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRH 289 (365)
T ss_dssp HHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCS
T ss_pred HcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCC
Confidence 999986 44333 1123344445444455788999999974
No 255
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=82.83 E-value=19 Score=32.04 Aligned_cols=66 Identities=20% Similarity=0.317 Sum_probs=39.3
Q ss_pred HHHHHHHHHcCCCEEEEeccccccc-----cCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEe
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFV-----PNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFH 94 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fv-----p~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H 94 (277)
-+-++.|.+.|+++ +.+ |.|+ |.+.=..+.++.+++. ++..+.+. +.| .+.++...++|++.+++-
T Consensus 31 ~~i~~~L~~~Gv~~--IE~--g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l--~~~-~~~i~~a~~~g~~~v~i~ 101 (307)
T 1ydo_A 31 ITWINQLSRTGLSY--IEI--TSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAAL--VPN-QRGLENALEGGINEACVF 101 (307)
T ss_dssp HHHHHHHHTTTCSE--EEE--EECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEE--CCS-HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCE--EEE--CCCcCcccccccCCHHHHHHHhhhc-CCCeEEEE--eCC-HHhHHHHHhCCcCEEEEE
Confidence 34455677778776 333 5453 4433223455666553 66666654 344 446888899999998443
No 256
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=82.77 E-value=6.6 Score=35.64 Aligned_cols=84 Identities=13% Similarity=0.168 Sum_probs=52.3
Q ss_pred CCceEeeecc---ccCcccHHHHHHHHHHcCCCEEEEeccccccccC-----CCCCHHHHHHHHhcCCCCeeeeeeeccC
Q psy11600 4 VQCMIGPSIL---NSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPN-----LTFGHPVVKCLRNKIPKAFFETHMMVQN 75 (277)
Q Consensus 4 ~~~~~~~s~~---~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~-----~~~g~~~v~~l~~~~~~~~~d~Hlmv~~ 75 (277)
+.++|+|.=+ ..+..+..+-.+.|++.|+|++|+ .+|.+.+. -.+..+.++.+|+. .++|+-+-=-+.+
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~v--s~g~~~~~~~~~~~~~~~~~~~~ik~~-~~iPVi~~GgI~s 288 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDV--SSGAIVPARMNVYPGYQVPFAELIRRE-ADIPTGAVGLITS 288 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEE--ECCCSSCCCCCCCTTTTHHHHHHHHHH-TTCCEEEESSCCC
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEE--ecCCccCCCCCCCccccHHHHHHHHHH-cCCcEEeeCCCCC
Confidence 4567777522 123456667788899999999666 44443321 12345788999987 4677655434445
Q ss_pred cHHhHHHHHhcC-CCeE
Q psy11600 76 PQQWIEPMADAN-VDQY 91 (277)
Q Consensus 76 p~~~i~~l~~ag-~d~i 91 (277)
++... .+.+.| +|.+
T Consensus 289 ~e~a~-~~L~~G~aD~V 304 (340)
T 3gr7_A 289 GWQAE-EILQNGRADLV 304 (340)
T ss_dssp HHHHH-HHHHTTSCSEE
T ss_pred HHHHH-HHHHCCCeeEE
Confidence 65544 455556 9988
No 257
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=82.75 E-value=20 Score=32.34 Aligned_cols=86 Identities=12% Similarity=0.200 Sum_probs=48.7
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCC---CCCHHHHHHHHhcCCCCeeeeeeeccC-cHHhHHHHHhcCCCeE
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNL---TFGHPVVKCLRNKIPKAFFETHMMVQN-PQQWIEPMADANVDQY 91 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~---~~g~~~v~~l~~~~~~~~~d~Hlmv~~-p~~~i~~l~~ag~d~i 91 (277)
+...+.++++.+.+.|++.+++ ..|..-|.. .+=.++++.+++. ++.+ ++-... ..+.++.+.++|++.+
T Consensus 100 s~eei~~~~~~~~~~g~~~i~~--~gg~~~p~~~~~~~l~~ll~~ik~~--g~~i--~~t~G~l~~e~l~~L~~aGvd~v 173 (369)
T 1r30_A 100 EVEQVLESARKAKAAGSTRFCM--GAAWKNPHERDMPYLEQMVQGVKAM--GLEA--CMTLGTLSESQAQRLANAGLDYY 173 (369)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE--EECCSSCCTTTHHHHHHHHHHHHHT--TSEE--EEECSSCCHHHHHHHHHHCCCEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEE--EeCCCCCCcCCHHHHHHHHHHHHHc--CCeE--EEecCCCCHHHHHHHHHCCCCEE
Confidence 3445556666666788998663 333211221 1223566666653 3333 322211 3457899999999999
Q ss_pred EEeccCCCCCHHHHHHHHh
Q psy11600 92 TFHVEPVDNVPQVIRQIKE 110 (277)
Q Consensus 92 ~~H~e~~d~g~~~i~~i~~ 110 (277)
.+-++. .+++.+.+++
T Consensus 174 ~i~les---~~e~~~~i~~ 189 (369)
T 1r30_A 174 NHNLDT---SPEFYGNIIT 189 (369)
T ss_dssp ECCCBS---CHHHHHHHCC
T ss_pred eecCcC---CHHHHHHhCC
Confidence 655554 4666666653
No 258
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=82.72 E-value=26 Score=31.25 Aligned_cols=78 Identities=9% Similarity=0.037 Sum_probs=42.1
Q ss_pred cCcHHhHHHHHhcCCCeEEEeccCCC-C------------CHHHHHHHHhhCCCcccc---hhhhhHHHHhcCCCeEE-e
Q psy11600 74 QNPQQWIEPMADANVDQYTFHVEPVD-N------------VPQVIRQIKEAGMKVGQV---LQDWIEPMADANVDQYT-F 136 (277)
Q Consensus 74 ~~p~~~i~~l~~ag~d~i~~H~e~~d-~------------g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~g~d~it-~ 136 (277)
....+..+.+.+.|||+|=+=.|... | --.+|+++++. ..++.+ -.+.++.-.++|+++|- +
T Consensus 52 ~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~-~vpiSIDT~~~~Va~aAl~aGa~iINdV 130 (294)
T 2dqw_A 52 ERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL-GVPVSVDTRKPEVAEEALKLGAHLLNDV 130 (294)
T ss_dssp -CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-CSCEEEECSCHHHHHHHHHHTCSEEECS
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-CCeEEEECCCHHHHHHHHHhCCCEEEEC
Confidence 44556678888899999944444321 1 23445555543 444433 35566666777888763 2
Q ss_pred ecCCCCChHHHHHHHHHhC
Q psy11600 137 HVEPVDNVPQVIRQIKEAG 155 (277)
Q Consensus 137 H~E~~~~~~~~~~~I~~~g 155 (277)
-.+ ..+...+.+++.|
T Consensus 131 sg~---~d~~m~~v~a~~~ 146 (294)
T 2dqw_A 131 TGL---RDERMVALAARHG 146 (294)
T ss_dssp SCS---CCHHHHHHHHHHT
T ss_pred CCC---CChHHHHHHHHhC
Confidence 222 2345555565554
No 259
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=82.59 E-value=11 Score=33.20 Aligned_cols=99 Identities=14% Similarity=0.081 Sum_probs=58.2
Q ss_pred CcccHHHHHHHHHHcCCCEEEEecccccccc-CCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc--CCCeEE
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVP-NLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA--NVDQYT 92 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp-~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a--g~d~i~ 92 (277)
|.....+..+++.+.|+|. +||-=+.-.. .+.-=.++|+.+++. .++|+.+.-. +|+ .++...++ |++++
T Consensus 32 ~~~~a~~~a~~~v~~GAdi--IDIg~~s~~~eE~~rv~~vi~~l~~~-~~~pisIDT~--~~~-v~~aal~a~~Ga~iI- 104 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHY--LDVNTGPTADDPVRVMEWLVKTIQEV-VDLPCCLDST--NPD-AIEAGLKVHRGHAMI- 104 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSE--EEEECCSCSSCHHHHHHHHHHHHHHH-CCCCEEEECS--CHH-HHHHHHHHCCSCCEE-
T ss_pred CHHHHHHHHHHHHHCCCCE--EEEcCCcCchhHHHHHHHHHHHHHHh-CCCeEEEeCC--CHH-HHHHHHHhCCCCCEE-
Confidence 4445555666677889999 7765433111 111123567788875 5777766543 554 35555666 99988
Q ss_pred EeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeec
Q psy11600 93 FHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 93 ~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~ 138 (277)
-++.- +.+ -....++..+++|+.+|.+|.
T Consensus 105 --Ndvs~-~~d--------------~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 105 --NSTSA-DQW--------------KMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp --EEECS-CHH--------------HHHHHHHHHHHHTCEEEEESC
T ss_pred --EECCC-Ccc--------------ccHHHHHHHHHcCCCEEEEec
Confidence 22221 110 002345667889999999998
No 260
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=82.46 E-value=3.3 Score=38.12 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=48.2
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEe
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFH 94 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H 94 (277)
.+.++.+.+.|+|.+|+|.-.|+. ..-.+.++++|+.+ ++++-+. -+.. .+.++.+.++|+|++.+.
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~----~~~~~~i~~i~~~~-~~~Vivg-~v~t-~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHS----LNIIRTLKEIKSKM-NIDVIVG-NVVT-EEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSB----HHHHHHHHHHHHHC-CCEEEEE-EECS-HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCc----HHHHHHHHHHHHhc-CCcEEEc-cCCC-HHHHHHHHHcCcCEEEEe
Confidence 678888999999999999776532 12236788888875 6666552 2233 456788999999999774
No 261
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=82.37 E-value=4.2 Score=39.52 Aligned_cols=115 Identities=10% Similarity=0.037 Sum_probs=76.2
Q ss_pred HHHHHHHHHHcCCCEEEEeccccccc--------cCCCCCHHHHHHHHhcCCC--Ceeeeeeec----------------
Q psy11600 20 LHSESQNLLDSGADYLHLDVMDGTFV--------PNLTFGHPVVKCLRNKIPK--AFFETHMMV---------------- 73 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~DimDg~fv--------p~~~~g~~~v~~l~~~~~~--~~~d~Hlmv---------------- 73 (277)
..+.++.+.++|+|. +.|-=+.+- |+....++.++++.+.|.+ +.+.+...-
T Consensus 349 ~~~~a~~~l~aGad~--V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~ 426 (555)
T 1jvn_A 349 ALEVASLYFRSGADK--VSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFET 426 (555)
T ss_dssp HHHHHHHHHHHTCSE--EEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEEC
T ss_pred HHHHHHHHHHcCCCE--EEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccc
Confidence 346677788889998 443322221 2234467889999887763 555555431
Q ss_pred -------------------------cCcHHhHHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhhCCCcccc-----
Q psy11600 74 -------------------------QNPQQWIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEAGMKVGQV----- 118 (277)
Q Consensus 74 -------------------------~~p~~~i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~~~~~~d~----- 118 (277)
.++.++++.+.++|++.+.+|--..+| ..++++++++....|+-.
T Consensus 427 ~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~iPVIasGGi~ 506 (555)
T 1jvn_A 427 EYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAG 506 (555)
T ss_dssp SSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEEECSCCC
T ss_pred cccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCCccEEEECCCC
Confidence 124578899999999999998543333 467889998887766533
Q ss_pred -hhhhhHHHHhcCCCeEEe
Q psy11600 119 -LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 -p~~~i~~~~~~g~d~it~ 136 (277)
+++..+.+...|++-+.+
T Consensus 507 s~~d~~~~~~~~G~~gviv 525 (555)
T 1jvn_A 507 VPEHFEEAFLKTRADACLG 525 (555)
T ss_dssp SHHHHHHHHHHSCCSEEEE
T ss_pred CHHHHHHHHHhcCChHHHH
Confidence 676666666578877665
No 262
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=82.23 E-value=15 Score=33.13 Aligned_cols=67 Identities=13% Similarity=0.144 Sum_probs=37.5
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCH---HHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc----CCCeE
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGH---PVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA----NVDQY 91 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~---~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a----g~d~i 91 (277)
.--+-++.|.+.|+++ +.+ | | |. .+| +.++.+++..++..+.+.. -.+ .+.++...++ |++.+
T Consensus 29 ~Kl~ia~~L~~~Gv~~--IE~--g-~-p~--~~~~d~e~v~~i~~~~~~~~i~~l~-r~~-~~~i~~a~~al~~ag~~~v 98 (325)
T 3eeg_A 29 EKIIVAKALDELGVDV--IEA--G-F-PV--SSPGDFNSVVEITKAVTRPTICALT-RAK-EADINIAGEALRFAKRSRI 98 (325)
T ss_dssp HHHHHHHHHHHHTCSE--EEE--E-C-TT--SCHHHHHHHHHHHHHCCSSEEEEEC-CSC-HHHHHHHHHHHTTCSSEEE
T ss_pred HHHHHHHHHHHcCCCE--EEE--e-C-CC--CCHhHHHHHHHHHHhCCCCEEEEee-cCC-HHHHHHHHHhhcccCCCEE
Confidence 3334556677788887 333 3 3 22 233 4677787766776655432 122 2334444444 99999
Q ss_pred EEec
Q psy11600 92 TFHV 95 (277)
Q Consensus 92 ~~H~ 95 (277)
++..
T Consensus 99 ~i~~ 102 (325)
T 3eeg_A 99 HTGI 102 (325)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6653
No 263
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=82.16 E-value=18 Score=32.51 Aligned_cols=113 Identities=11% Similarity=0.073 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCCEE--EEecccccccc--CCCCC--HHHHHHHHhcCCCCeeeeeee--ccCcHHhHHHHHhcCCCeEE
Q psy11600 21 HSESQNLLDSGADYL--HLDVMDGTFVP--NLTFG--HPVVKCLRNKIPKAFFETHMM--VQNPQQWIEPMADANVDQYT 92 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~--h~DimDg~fvp--~~~~g--~~~v~~l~~~~~~~~~d~Hlm--v~~p~~~i~~l~~ag~d~i~ 92 (277)
+...+.++..|+|.+ |++..-..+-| +-.|. .+.++++|+. .++|+-+=+- ..+ .+.++.+.++|+|.|+
T Consensus 130 ~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~-~~~Pv~vK~~~~~~~-~~~a~~a~~~Gad~I~ 207 (349)
T 1p0k_A 130 AQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSR-VSVPVIVKEVGFGMS-KASAGKLYEAGAAAVD 207 (349)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHH-CSSCEEEEEESSCCC-HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHH-cCCCEEEEecCCCCC-HHHHHHHHHcCCCEEE
Confidence 334455677889985 44422100111 11231 3679999986 5777776431 134 4568888999999998
Q ss_pred E--eccC-----------------CCC---CHHHHHHHHhhC-CCcccc------hhhhhHHHHhcCCCeEEe
Q psy11600 93 F--HVEP-----------------VDN---VPQVIRQIKEAG-MKVGQV------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 93 ~--H~e~-----------------~d~---g~~~i~~i~~~~-~~~~d~------p~~~i~~~~~~g~d~it~ 136 (277)
+ |--. .++ .+..|+.+++.. ..|+-. +++..+.+. +|||.|.+
T Consensus 208 v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~-~GAd~V~i 279 (349)
T 1p0k_A 208 IGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIA-LGASCTGM 279 (349)
T ss_dssp EEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHH-TTCSEEEE
T ss_pred EcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHH-cCCCEEEE
Confidence 8 5210 122 334455555543 333321 566665554 57777766
No 264
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=82.14 E-value=21 Score=31.02 Aligned_cols=143 Identities=17% Similarity=0.195 Sum_probs=80.4
Q ss_pred CceEeeeccccCcccHHHHHHHHHHcCCCEEEE--eccccccccCCCCCHHHHHHHHhcCCCCeeeeeeecc--------
Q psy11600 5 QCMIGPSILNSDLSNLHSESQNLLDSGADYLHL--DVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQ-------- 74 (277)
Q Consensus 5 ~~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~--DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~-------- 74 (277)
+.+|..+|..-+...+-++++.+...|+|.+=+ |..+. .+++..=.+.++.+|+..+++|+.+=+=..
T Consensus 19 ~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~--~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~ 96 (258)
T 4h3d_A 19 RPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFEN--VENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLI 96 (258)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTT--TTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCC
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccc--cCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCC
Confidence 457899999989888888888888888887543 44432 122223345677888765678876644332
Q ss_pred CcHHhHH---HHHhcC-CCeEEEeccCCCC---CHHHHHHHHhhCCC----cccc---h-----hhhhHHHHhcCCCeEE
Q psy11600 75 NPQQWIE---PMADAN-VDQYTFHVEPVDN---VPQVIRQIKEAGMK----VGQV---L-----QDWIEPMADANVDQYT 135 (277)
Q Consensus 75 ~p~~~i~---~l~~ag-~d~i~~H~e~~d~---g~~~i~~i~~~~~~----~~d~---p-----~~~i~~~~~~g~d~it 135 (277)
+.++|.+ .+.+.| +|++ .+|..-. ...+++..++...+ .||. | ...+..+.+.|||.+=
T Consensus 97 ~~~~~~~ll~~~~~~~~~d~i--DvEl~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvK 174 (258)
T 4h3d_A 97 SRDYYTTLNKEISNTGLVDLI--DVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPK 174 (258)
T ss_dssp CHHHHHHHHHHHHHTTCCSEE--EEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHhcCCchhh--HHhhhccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 1233443 344455 8999 6664321 22333333443322 2333 3 2345566777887654
Q ss_pred eecCCCCChHHHHHHHH
Q psy11600 136 FHVEPVDNVPQVIRQIK 152 (277)
Q Consensus 136 ~H~E~~~~~~~~~~~I~ 152 (277)
+=.-|. +..+.+++++
T Consensus 175 ia~~~~-~~~D~l~Ll~ 190 (258)
T 4h3d_A 175 IAVMPQ-NEKDVLVLLE 190 (258)
T ss_dssp EEECCS-SHHHHHHHHH
T ss_pred EEEccC-CHHHHHHHHH
Confidence 433211 4455555444
No 265
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=82.13 E-value=2.3 Score=38.72 Aligned_cols=70 Identities=17% Similarity=0.212 Sum_probs=42.4
Q ss_pred hhHHHHHhhCCCccEEEeCCCCcCcHHHH---HHccCCC-CCcccccCHHHHHHHHHh-hCCCCeEEEeCCCCccCHHHh
Q psy11600 201 PKVKWLRENYPTLNIEVDGGVGPNTIDEC---AKCLTGF-GGQKFMQDMMPKVKWLRE-NYPTLNIEVDGGVGPNTIDEC 275 (277)
Q Consensus 201 ~kI~~l~~~~~~~~i~vdGgV~~~tv~~~---~~~gpg~-ggq~F~~~~~~kI~~l~~-~~~~~~I~VDGGI~~~~~~~~ 275 (277)
+-++.+++..|...++| .++|.+++ .++|++. -=-.|.+ +.+++..+ ..++..|++-||||++|++.+
T Consensus 220 ~Av~~ar~~~p~~kIeV----EVdtldea~eAl~aGaD~I~LDn~~~---~~l~~av~~l~~~v~ieaSGGIt~~~I~~~ 292 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEV----ETETLAELEEAISAGADIIMLDNFSL---EMMREAVKINAGRAALENSGNITLDNLKEC 292 (320)
T ss_dssp HHHHHHHHHSTTSCEEE----EESSHHHHHHHHHTTCSEEEEESCCH---HHHHHHHHHHTTSSEEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEE----EECCHHHHHHHHHcCCCEEEECCCCH---HHHHHHHHHhCCCCeEEEECCCCHHHHHHH
Confidence 44566676777655544 34565554 4566663 1122333 34444333 235789999999999999987
Q ss_pred hC
Q psy11600 276 AK 277 (277)
Q Consensus 276 ~~ 277 (277)
++
T Consensus 293 a~ 294 (320)
T 3paj_A 293 AE 294 (320)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 266
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=82.08 E-value=28 Score=31.15 Aligned_cols=154 Identities=10% Similarity=0.037 Sum_probs=93.6
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccccccccCCCCC-HHHHHHHHhcCCCCeeeeeeeccC-----cHHhHHHHHhcCCCeE
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFG-HPVVKCLRNKIPKAFFETHMMVQN-----PQQWIEPMADANVDQY 91 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g-~~~v~~l~~~~~~~~~d~Hlmv~~-----p~~~i~~l~~ag~d~i 91 (277)
.+|.+.+++|...+.++ ++|-+|.--. ..-+ ..+.+.+++. .+++.-+||-..+ ..+.+..+.++|++-+
T Consensus 39 ~~l~~~~~~l~~l~p~f--vsVT~gagg~-~r~~t~~~a~~i~~~-~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nI 114 (304)
T 3fst_A 39 QTLWNSIDRLSSLKPKF--VSVTYGANSG-ERDRTHSIIKGIKDR-TGLEAAPHLTCIDATPDELRTIARDYWNNGIRHI 114 (304)
T ss_dssp HHHHHHHHHHHTTCCSE--EEECCCTTSS-CHHHHHHHHHHHHHH-HCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhcCCCCE--EEEeeCCCCc-chhHHHHHHHHHHHH-hCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEE
Confidence 34667889999888998 8888865432 1122 2445567664 5889999998876 3335667778898766
Q ss_pred EEe-ccCCC-------CCHHHHHHHHhhCCCcccc---h------------hhhhHHHHhcCCCeEEeecCCCC-ChHHH
Q psy11600 92 TFH-VEPVD-------NVPQVIRQIKEAGMKVGQV---L------------QDWIEPMADANVDQYTFHVEPVD-NVPQV 147 (277)
Q Consensus 92 ~~H-~e~~d-------~g~~~i~~i~~~~~~~~d~---p------------~~~i~~~~~~g~d~it~H~E~~~-~~~~~ 147 (277)
-.= -|... ...++|+.+|+.+...+-+ | ..+++.=+++|||++.=++==+- ...+.
T Consensus 115 LaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f 194 (304)
T 3fst_A 115 VALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRF 194 (304)
T ss_dssp EEECCCCC------CCCHHHHHHHHHHHCCCEEEEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEEEECCCSCHHHHHHH
T ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEeCccCCHHHHHHH
Confidence 221 33221 1678999999876543222 2 23555557899998765531000 22344
Q ss_pred HHHHHHhCCc--cceeeCCCCCHHhHHHHH
Q psy11600 148 IRQIKEAGMK--VGLAIKPKTPVDVIAEYI 175 (277)
Q Consensus 148 ~~~I~~~g~~--~g~~i~p~t~~~~i~~~i 175 (277)
.+.+++.|+. .=.|+.|-++...+..+.
T Consensus 195 ~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~ 224 (304)
T 3fst_A 195 RDRCVSAGIDVEIIPGILPVSNFKQAKKLA 224 (304)
T ss_dssp HHHHHHTTCCSCEECEECCCSCHHHHHHHH
T ss_pred HHHHHhcCCCCcEEEEecccCCHHHHHHHH
Confidence 4555666543 345777777776665553
No 267
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=81.97 E-value=5.1 Score=36.55 Aligned_cols=115 Identities=13% Similarity=0.101 Sum_probs=69.1
Q ss_pred HHHHHHHHHHcCCCEEEEecc-----------------c---cccccCCCCCHHHHHHHHhcCC-CCeeeeeeecc----
Q psy11600 20 LHSESQNLLDSGADYLHLDVM-----------------D---GTFVPNLTFGHPVVKCLRNKIP-KAFFETHMMVQ---- 74 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~Dim-----------------D---g~fvp~~~~g~~~v~~l~~~~~-~~~~d~Hlmv~---- 74 (277)
+.+..++++++|.|.+-+--- | |.+-....|-.++|+++|+.++ ++++-+=|-..
T Consensus 145 f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~ 224 (343)
T 3kru_A 145 FGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYME 224 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSST
T ss_pred HHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhc
Confidence 345556677889999444311 1 2222223344789999999864 66777655442
Q ss_pred ------CcHHhHHHHHhcCCCeEEEe-ccCC-------CC-CHHHHHHHHhhCCCcccc------hhhhhHHHHhcC-CC
Q psy11600 75 ------NPQQWIEPMADANVDQYTFH-VEPV-------DN-VPQVIRQIKEAGMKVGQV------LQDWIEPMADAN-VD 132 (277)
Q Consensus 75 ------~p~~~i~~l~~ag~d~i~~H-~e~~-------d~-g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g-~d 132 (277)
+..+.++.+.++ +|++++. -... .+ ...+++.+|+....|+-. |+.- +.+.+.| ||
T Consensus 225 ~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~A-e~~l~~G~aD 302 (343)
T 3kru_A 225 GGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELA-EEILSNERAD 302 (343)
T ss_dssp TSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHH-HHHHHTTSCS
T ss_pred cCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHH-HHHHhchhhH
Confidence 223357778888 9999773 2110 11 356788888876665432 4444 4444455 89
Q ss_pred eEEe
Q psy11600 133 QYTF 136 (277)
Q Consensus 133 ~it~ 136 (277)
.|.|
T Consensus 303 ~V~i 306 (343)
T 3kru_A 303 LVAL 306 (343)
T ss_dssp EEEE
T ss_pred HHHH
Confidence 9888
No 268
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=81.88 E-value=21 Score=32.08 Aligned_cols=58 Identities=16% Similarity=0.113 Sum_probs=36.6
Q ss_pred HhHHHHHhcCCCeEEEeccCCC-C------------CHHHHHHHHhhCCCcccc---hhhhhHHHHhcCCCeEE
Q psy11600 78 QWIEPMADANVDQYTFHVEPVD-N------------VPQVIRQIKEAGMKVGQV---LQDWIEPMADANVDQYT 135 (277)
Q Consensus 78 ~~i~~l~~ag~d~i~~H~e~~d-~------------g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~g~d~it 135 (277)
+....+.+.|||+|=+=.|... | -..+|+++++.+..++.+ -...++.-.++|+++|-
T Consensus 37 ~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~~~Va~aAl~aGa~iIN 110 (314)
T 2vef_A 37 QQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWKSQVAEAALAAGADLVN 110 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHcCCCEEE
Confidence 4567788899999944444331 2 245677777766555544 45566777778888874
No 269
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=81.85 E-value=4.1 Score=39.60 Aligned_cols=66 Identities=14% Similarity=0.190 Sum_probs=47.4
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCCC---------CHHHHHHHHhhCCCcccc---hh-------------hhhHHHH
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVDN---------VPQVIRQIKEAGMKVGQV---LQ-------------DWIEPMA 127 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d~---------g~~~i~~i~~~~~~~~d~---p~-------------~~i~~~~ 127 (277)
+.+|.+..+.+.++|++++|| +|.... ..+.|+++++....|+.+ .. +-++.+.
T Consensus 279 ~~dp~~~A~~~~~~Ga~~l~~-~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 279 LGKPVQLAQKYYQQGADEVTF-LNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp CHHHHHHHHHHHHTTCSEEEE-EEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEE-EeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 348999999999999999954 343211 256777777766666654 22 4489999
Q ss_pred hcCCCeEEeecC
Q psy11600 128 DANVDQYTFHVE 139 (277)
Q Consensus 128 ~~g~d~it~H~E 139 (277)
++|||.|.+-..
T Consensus 358 ~aGad~V~igt~ 369 (555)
T 1jvn_A 358 RSGADKVSIGTD 369 (555)
T ss_dssp HHTCSEEEECHH
T ss_pred HcCCCEEEECCH
Confidence 999999999765
No 270
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=81.85 E-value=5.8 Score=34.04 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=58.2
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcc--cc--hhhhh
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG--QV--LQDWI 123 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~--d~--p~~~i 123 (277)
.+|.++.++.+|+..|++++- +.+.......+.+.+.|++.+++++... ..+.+++.+++.+..+. -+ |..+-
T Consensus 133 ~Sf~~~~l~~~~~~~p~~~~~--~l~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~v~~~~~~G~~v~~wTvn~~~~~~ 209 (248)
T 1zcc_A 133 FSFSEEMRQGLQSIAPEFRRM--MTLDIAKSPSLVGAVHHASIIEITPAQM-RRPGIIEASRKAGLEIMVYYGGDDMAVH 209 (248)
T ss_dssp ECSCHHHHHHHHHHCTTSEEE--EEHHHHSSTHHHHHTTCCSEEEECHHHH-HSHHHHHHHHHHTCEEEEECCCCCHHHH
T ss_pred EECCHHHHHHHHHHCCCCcEE--EEecCCccHHHHHHHcCCCEEEecHHHh-CCHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence 468999999999988887643 2222211134555678999997666544 04788999998876532 22 55554
Q ss_pred HHHHhcCCCeEEe
Q psy11600 124 EPMADANVDQYTF 136 (277)
Q Consensus 124 ~~~~~~g~d~it~ 136 (277)
..+.+.|+|.|+-
T Consensus 210 ~~l~~~GvdgIiT 222 (248)
T 1zcc_A 210 REIATSDVDYINL 222 (248)
T ss_dssp HHHHHSSCSEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 4388999999875
No 271
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=81.70 E-value=22 Score=31.84 Aligned_cols=103 Identities=5% Similarity=-0.046 Sum_probs=67.4
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEec-cC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHV-EP 97 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~-e~ 97 (277)
++.+.++.+.+.|+|.+++-.- ...+.++.+++. ++++-+ .+.+ .+.++.+.++|+|++.++- +.
T Consensus 90 ~~~~~~~~~~~~g~d~V~l~~g---------~p~~~~~~l~~~--g~~v~~--~v~s-~~~a~~a~~~GaD~i~v~g~~~ 155 (326)
T 3bo9_A 90 WADDLVKVCIEEKVPVVTFGAG---------NPTKYIRELKEN--GTKVIP--VVAS-DSLARMVERAGADAVIAEGMES 155 (326)
T ss_dssp THHHHHHHHHHTTCSEEEEESS---------CCHHHHHHHHHT--TCEEEE--EESS-HHHHHHHHHTTCSCEEEECTTS
T ss_pred CHHHHHHHHHHCCCCEEEECCC---------CcHHHHHHHHHc--CCcEEE--EcCC-HHHHHHHHHcCCCEEEEECCCC
Confidence 4678888888999999876321 226788899874 555544 2334 4466778899999998763 21
Q ss_pred C--C---CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEe
Q psy11600 98 V--D---NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 98 ~--d---~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~ 136 (277)
. . ....+++++++....|+-. +++..+.+ ++||+.+-+
T Consensus 156 GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al-~~GA~gV~v 204 (326)
T 3bo9_A 156 GGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAF-ALGAEAVQM 204 (326)
T ss_dssp SEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HHTCSEEEE
T ss_pred CccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHH-HhCCCEEEe
Confidence 1 0 1346777877766555433 55555554 479988776
No 272
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=81.65 E-value=2.5 Score=41.18 Aligned_cols=19 Identities=21% Similarity=0.393 Sum_probs=13.8
Q ss_pred hhhhHHHHhcCCCeEEeec
Q psy11600 120 QDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 120 ~~~i~~~~~~g~d~it~H~ 138 (277)
.+.++.|+++|+|.+.+-.
T Consensus 283 ~eR~~aLv~AGvD~iviD~ 301 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDS 301 (556)
T ss_dssp HHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHhcCCcEEEEec
Confidence 4567778888888887743
No 273
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=81.63 E-value=3.6 Score=36.35 Aligned_cols=91 Identities=14% Similarity=0.257 Sum_probs=52.6
Q ss_pred ecCCCCChHHHHHHHHHhC-CccceeeCCCCCHHhHHHHHh-hcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCcc
Q psy11600 137 HVEPVDNVPQVIRQIKEAG-MKVGLAIKPKTPVDVIAEYIE-SADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLN 214 (277)
Q Consensus 137 H~E~~~~~~~~~~~I~~~g-~~~g~~i~p~t~~~~i~~~i~-~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~ 214 (277)
|.+..++....++..++.. ....+.+...|. +.+...++ .+|++.+-+..| +.+-+.++.++..+|++.
T Consensus 161 Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~tl-ee~~~A~~aGaD~I~ld~~~~--------~~l~~~v~~l~~~~~~~~ 231 (273)
T 2b7n_A 161 HLRHVKDLKSFLTHARKNLPFTAKIEIECESF-EEAKNAMNAGADIVMCDNLSV--------LETKEIAAYRDAHYPFVL 231 (273)
T ss_dssp HHTTCSSHHHHHHHHGGGSCTTCCEEEEESSH-HHHHHHHHHTCSEEEEETCCH--------HHHHHHHHHHHHHCTTCE
T ss_pred HHHHhCCHHHHHHHHHHhCCCCceEEEEcCCH-HHHHHHHHcCCCEEEECCCCH--------HHHHHHHHHhhccCCCcE
Confidence 4442223344555555432 112455555553 55555443 367665432211 222222334555578899
Q ss_pred EEEeCCCCcCcHHHHHHccCCC
Q psy11600 215 IEVDGGVGPNTIDECAKCLTGF 236 (277)
Q Consensus 215 i~vdGgV~~~tv~~~~~~gpg~ 236 (277)
+.+.|||+.+|+.++.++|+++
T Consensus 232 i~AsGGI~~~ni~~~~~aGaD~ 253 (273)
T 2b7n_A 232 LEASGNISLESINAYAKSGVDA 253 (273)
T ss_dssp EEEESSCCTTTHHHHHTTTCSE
T ss_pred EEEECCCCHHHHHHHHHcCCcE
Confidence 9999999999999999999986
No 274
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=81.41 E-value=11 Score=34.58 Aligned_cols=146 Identities=12% Similarity=0.046 Sum_probs=88.3
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ag~d 89 (277)
.+...+.++.+++.+.|.+.+-+.+-+ ++..+ .+.++++|+.+ +++++-+..--. ++. ++++.+.+.|++
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~----~~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 237 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPV----ADDGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPW 237 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGG----CTTCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCS
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCC----CChHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCC
Confidence 356667778888888898886555432 45678 89999999866 455544432111 233 356677788999
Q ss_pred eEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCccc
Q psy11600 90 QYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVG 159 (277)
Q Consensus 90 ~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g 159 (277)
|+. +... ......+.+++.+..|+-. +.++-+.+.+-.+|.+.+-+-- +.+. ++.+..++.|+..-
T Consensus 238 ~iE---qP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~ 313 (388)
T 2nql_A 238 FAE---APVWTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRIGALAAEHGIDVI 313 (388)
T ss_dssp CEE---CCSCTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHHHHHHHHHTCEEC
T ss_pred EEE---CCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEE
Confidence 983 2222 2466778888877665532 5555555555568999885431 1333 34445556665554
Q ss_pred eeeCCCCCHH
Q psy11600 160 LAIKPKTPVD 169 (277)
Q Consensus 160 ~~i~p~t~~~ 169 (277)
.+.+.++++.
T Consensus 314 ~h~~~es~i~ 323 (388)
T 2nql_A 314 PHATVGAGIF 323 (388)
T ss_dssp CCCCSSCSHH
T ss_pred eecCCCcHHH
Confidence 4544456653
No 275
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=81.05 E-value=18 Score=31.95 Aligned_cols=96 Identities=17% Similarity=0.103 Sum_probs=53.9
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccC---CCC------CHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcC
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPN---LTF------GHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADAN 87 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~---~~~------g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag 87 (277)
....-+..+.+.+.|+|. +||-=-..-|. ++- =.+.++.+++. ++++.++- .+|+ .++...++|
T Consensus 28 ~~~a~~~a~~~v~~GAdi--IDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT--~~~~-va~aAl~aG 100 (280)
T 1eye_A 28 LDDAVKHGLAMAAAGAGI--VDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDT--MRAD-VARAALQNG 100 (280)
T ss_dssp HHHHHHHHHHHHHTTCSE--EEEECC--------------HHHHHHHHHHHHHT--TCCEEEEC--SCHH-HHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCCE--EEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeC--CCHH-HHHHHHHcC
Confidence 333444555667789999 88862111121 111 12456666653 67776653 3444 466677789
Q ss_pred CCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeec
Q psy11600 88 VDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 88 ~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~ 138 (277)
+++|- ++-...+- ...++..+++|+.+|.+|.
T Consensus 101 a~iIN-dvsg~~~d------------------~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 101 AQMVN-DVSGGRAD------------------PAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp CCEEE-ETTTTSSC------------------TTHHHHHHHHTCCEEEECC
T ss_pred CCEEE-ECCCCCCC------------------HHHHHHHHHhCCeEEEEcC
Confidence 99882 22111100 1356677889999999997
No 276
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=81.04 E-value=18 Score=32.65 Aligned_cols=76 Identities=12% Similarity=0.014 Sum_probs=41.3
Q ss_pred HHhHHHHHhcCCCeEEEeccCCC-C-----------CHHHHHHHHhhC-CCcccc---hhhhhHHHHhcCCCeEE-eecC
Q psy11600 77 QQWIEPMADANVDQYTFHVEPVD-N-----------VPQVIRQIKEAG-MKVGQV---LQDWIEPMADANVDQYT-FHVE 139 (277)
Q Consensus 77 ~~~i~~l~~ag~d~i~~H~e~~d-~-----------g~~~i~~i~~~~-~~~~d~---p~~~i~~~~~~g~d~it-~H~E 139 (277)
.+..+.+.+.|||+|=+=.|... | --.+|+++++.. ..++.+ -.+.++.-.++|+++|- +-.+
T Consensus 68 ~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~~~VaeaAl~aGa~iINDVsg~ 147 (318)
T 2vp8_A 68 RDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG 147 (318)
T ss_dssp HHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSCHHHHHHHHHHTCCEEEETTSS
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHHHHHHHhCCCEEEECCCC
Confidence 34567788899999933333221 1 233467777664 445544 45566777777888763 2222
Q ss_pred CCCChHHHHHHHHHhC
Q psy11600 140 PVDNVPQVIRQIKEAG 155 (277)
Q Consensus 140 ~~~~~~~~~~~I~~~g 155 (277)
.-+...+.+++.|
T Consensus 148 ---~d~~m~~vaa~~g 160 (318)
T 2vp8_A 148 ---VDPAMPEVAAEFG 160 (318)
T ss_dssp ---SSTTHHHHHHHHT
T ss_pred ---CchHHHHHHHHhC
Confidence 2234555555553
No 277
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=80.93 E-value=28 Score=30.48 Aligned_cols=162 Identities=17% Similarity=0.158 Sum_probs=86.4
Q ss_pred HHHHHHHcCCCEEEEe--ccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC--------c------HHhHHHHHhc
Q psy11600 23 ESQNLLDSGADYLHLD--VMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN--------P------QQWIEPMADA 86 (277)
Q Consensus 23 ~~~~l~~~~~~~~h~D--imDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~--------p------~~~i~~l~~a 86 (277)
.....++.|+|.+-+= ...|-..|+ ..+++..++. .+ +-+|.|+.- . .+.++.+.++
T Consensus 13 ~a~~A~~~GAdRIELc~~L~~GGlTPS----~g~i~~~~~~-~~--ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~ 85 (256)
T 1twd_A 13 CALTAQQNGADRVELCAAPKEGGLTPS----LGVLKSVRQR-VT--IPVHPIIRPRGGDFCYSDGEFAAILEDVRTVREL 85 (256)
T ss_dssp HHHHHHHTTCSEEEECBCGGGTCBCCC----HHHHHHHHHH-CC--SCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCcccCCCCCC----HHHHHHHHHH-cC--CceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHc
Confidence 3445567899995442 233556665 3457888875 44 568888862 1 1246778889
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHH-HhcCCCeEEeecCCC--CChHHHHHHHHHhCCccceeeC
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPM-ADANVDQYTFHVEPV--DNVPQVIRQIKEAGMKVGLAIK 163 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~-~~~g~d~it~H~E~~--~~~~~~~~~I~~~g~~~g~~i~ 163 (277)
|+|-+-|=+=..|| .+| ....+.| ..++.--+|||--=+ .++...++.+..+
T Consensus 86 GadGvV~G~Lt~dg--------------~iD--~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~l--------- 140 (256)
T 1twd_A 86 GFPGLVTGVLDVDG--------------NVD--MPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAEL--------- 140 (256)
T ss_dssp TCSEEEECCBCTTS--------------SBC--HHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHH---------
T ss_pred CCCEEEEeeECCCC--------------CcC--HHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHc---------
Confidence 99988443222222 111 1222222 233455699996200 0122222223222
Q ss_pred CCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCC
Q psy11600 164 PKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTG 235 (277)
Q Consensus 164 p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg 235 (277)
++--++|- |. +.-..+-++.++++.++...+.|..=|||+..|++++.+.|..
T Consensus 141 ---------------G~~rILTS--G~--~~~a~~g~~~L~~Lv~~a~~i~Im~GgGv~~~Ni~~l~~tGv~ 193 (256)
T 1twd_A 141 ---------------GIARVLTS--GQ--KSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVL 193 (256)
T ss_dssp ---------------TCCEEEEC--TT--SSSTTTTHHHHHHHHTSSSCCEEEEESSCCTTTHHHHHHHTCS
T ss_pred ---------------CCCEEECC--CC--CCCHHHHHHHHHHHHHhhCCcEEEecCCcCHHHHHHHHHcCCC
Confidence 22233331 11 1123344555666654433677888899999999999865554
No 278
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=80.92 E-value=16 Score=32.69 Aligned_cols=103 Identities=10% Similarity=0.014 Sum_probs=68.0
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEec-cC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHV-EP 97 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~-e~ 97 (277)
++.+.++.+.+.|+|.+++-. | .| .++++.+|+. ++++-+. +..+ +.++.+.++|+|++.++- +.
T Consensus 76 ~~~~~~~~a~~~g~d~V~~~~--g--~p-----~~~i~~l~~~--g~~v~~~--v~~~-~~a~~~~~~GaD~i~v~g~~~ 141 (332)
T 2z6i_A 76 FVEDIVDLVIEEGVKVVTTGA--G--NP-----SKYMERFHEA--GIIVIPV--VPSV-ALAKRMEKIGADAVIAEGMEA 141 (332)
T ss_dssp THHHHHHHHHHTTCSEEEECS--S--CG-----GGTHHHHHHT--TCEEEEE--ESSH-HHHHHHHHTTCSCEEEECTTS
T ss_pred CHHHHHHHHHHCCCCEEEECC--C--Ch-----HHHHHHHHHc--CCeEEEE--eCCH-HHHHHHHHcCCCEEEEECCCC
Confidence 367888899999999966532 2 22 4678888873 6666543 3344 467788899999998762 21
Q ss_pred C--C---CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEe
Q psy11600 98 V--D---NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 98 ~--d---~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~ 136 (277)
. . ....+++++++....|+-. |++..+. ..+|||.+.+
T Consensus 142 GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~a-l~~GAdgV~v 190 (332)
T 2z6i_A 142 GGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAG-FMLGAEAVQV 190 (332)
T ss_dssp SEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHH-HHTTCSEEEE
T ss_pred CCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHH-HHcCCCEEEe
Confidence 1 1 1356788888877666533 5554444 4489998876
No 279
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=80.90 E-value=11 Score=36.07 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=41.9
Q ss_pred cHHhHHHHHhcCCCeEEEeccCCCC--CHHHHHHHHhhC-CCccc---c-hhhhhHHHHhcCCCeEEe
Q psy11600 76 PQQWIEPMADANVDQYTFHVEPVDN--VPQVIRQIKEAG-MKVGQ---V-LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~H~e~~d~--g~~~i~~i~~~~-~~~~d---~-p~~~i~~~~~~g~d~it~ 136 (277)
..+.++.+.++|+|.+++|.-..+. ..+.++++|+.. ..++- + ..+.+..+.++|+|.|.+
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEE
Confidence 3566888899999999666432211 247799999886 44432 2 455677888888888866
No 280
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=80.82 E-value=17 Score=38.52 Aligned_cols=72 Identities=15% Similarity=0.242 Sum_probs=43.0
Q ss_pred HHHHHHHHcCCCEEEEeccc-cccccC---CCCCH-HHHHHHHhcCCCCeeeeeeec-------cCcH----HhHHHHHh
Q psy11600 22 SESQNLLDSGADYLHLDVMD-GTFVPN---LTFGH-PVVKCLRNKIPKAFFETHMMV-------QNPQ----QWIEPMAD 85 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~DimD-g~fvp~---~~~g~-~~v~~l~~~~~~~~~d~Hlmv-------~~p~----~~i~~l~~ 85 (277)
+-.+.|.+.|+++.++.+.= +.|--. .+-+| +.++.+++..|+..+-+.+-- ..|. +.++...+
T Consensus 577 ~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~~~i~~a~~ 656 (1165)
T 2qf7_A 577 RIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYFVRQAAK 656 (1165)
T ss_dssp HHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHchhhHHHHHhccccccccccCCchhHHHHHHHHHh
Confidence 34456677777776666632 122111 12344 668888888888776544321 1233 45788888
Q ss_pred cCCCeEEE
Q psy11600 86 ANVDQYTF 93 (277)
Q Consensus 86 ag~d~i~~ 93 (277)
+|+|.+++
T Consensus 657 ~g~d~iri 664 (1165)
T 2qf7_A 657 GGIDLFRV 664 (1165)
T ss_dssp HTCCEEEE
T ss_pred cCcCEEEE
Confidence 99999855
No 281
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=80.82 E-value=1.7 Score=38.59 Aligned_cols=73 Identities=12% Similarity=0.157 Sum_probs=50.4
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeec--cCcHHhHHHHHhcCCCe
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMV--QNPQQWIEPMADANVDQ 90 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv--~~p~~~i~~l~~ag~d~ 90 (277)
.|+..+.+-++.+.+.|+|.+ =+-| |...|+..+ +.++.+++.++++++.+|.-- .-...-.....++|+++
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i--~l~Dt~G~~~P~~~~--~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~ 227 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEV--SLGDTIGRGTPDTVA--AMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRV 227 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEE--EEEETTSCCCHHHHH--HHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHHHHhcCCCEE--EecCCCCCcCHHHHH--HHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCE
Confidence 466677777777889999994 4557 555555333 678889988766889999833 33333344456789998
Q ss_pred E
Q psy11600 91 Y 91 (277)
Q Consensus 91 i 91 (277)
+
T Consensus 228 v 228 (295)
T 1ydn_A 228 F 228 (295)
T ss_dssp E
T ss_pred E
Confidence 8
No 282
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=80.76 E-value=26 Score=30.46 Aligned_cols=185 Identities=12% Similarity=0.072 Sum_probs=101.5
Q ss_pred CHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC--CHHHHHHHHhhCCCcc--cc-h-hhhhH
Q psy11600 51 GHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN--VPQVIRQIKEAGMKVG--QV-L-QDWIE 124 (277)
Q Consensus 51 g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~--g~~~i~~i~~~~~~~~--d~-p-~~~i~ 124 (277)
..+-|.-||+. -.. -.=+|-+......++|||-||+|.-.--- -..-+..+|+....++ .+ | .++++
T Consensus 9 NIdhVAtLRna-Rg~------~~Pdpv~aA~~ae~aGAdgITvHlReDrRHI~d~Dv~~L~~~~~~~lNlE~a~t~emi~ 81 (243)
T 1m5w_A 9 NIDHIATLRNA-RGT------AYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLA 81 (243)
T ss_dssp ECHHHHHHHHT-SSC------CCSCHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHHCSSEEEEEECSSHHHHH
T ss_pred eHHHhhhhhcc-CCC------CCCCHHHHHHHHHHcCCCEEEeCCCCCcccCCHHHHHHHHHhcCCCEEeccCCCHHHHH
Confidence 34556666654 111 11467777888889999999999764211 4566888888765444 33 4 56888
Q ss_pred HHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHh---HHHHHhhcCceEEEEecCCCCCchhhhhhhh
Q psy11600 125 PMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDV---IAEYIESADLVLIMTVEPGFGGQKFMQDMMP 201 (277)
Q Consensus 125 ~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~---i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~ 201 (277)
...+..++.+|+=+| ....+ .-.-|+......+. +...+++.++-+-+.++|+. +
T Consensus 82 ia~~~kP~~vtLVPE---~r~e~---------TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~----------~ 139 (243)
T 1m5w_A 82 IAVETKPHFCCLVPE---KRQEV---------TTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADE----------E 139 (243)
T ss_dssp HHHHHCCSEEEECCC---CSSCS---------SCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCH----------H
T ss_pred HHHHcCCCEEEECCC---CCCCc---------CCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCH----------H
Confidence 889999999999887 32110 11222322222222 33345667777777888752 2
Q ss_pred hHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhh--CCCCeEEEeCCCCccCHHHhh
Q psy11600 202 KVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLREN--YPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 202 kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~--~~~~~I~VDGGI~~~~~~~~~ 276 (277)
.|+..++..-. -|+ +-|-..+ .+ .+..-...-+++++..-+. ...+.+..=-|.|.+|+..++
T Consensus 140 qi~aA~~~GA~-~IE------LhTG~Ya-~a----~~~~~~~~el~~i~~aa~~A~~lGL~VnAGHgL~y~Nv~~ia 204 (243)
T 1m5w_A 140 QIKAAAEVGAP-FIE------IHTGCYA-DA----KTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIA 204 (243)
T ss_dssp HHHHHHHTTCS-EEE------EECHHHH-HC----CSHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHHHH
T ss_pred HHHHHHHhCcC-EEE------Eechhhh-cC----CCchhHHHHHHHHHHHHHHHHHcCCEEecCCCCCHHHHHHHh
Confidence 34444332211 111 1222111 00 0100011234444433222 245778888999999987664
No 283
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=80.74 E-value=29 Score=30.59 Aligned_cols=56 Identities=13% Similarity=0.028 Sum_probs=30.8
Q ss_pred HhHHHHHhcCCCeEEEeccCCC-C------------CHHHHHHHHhhCCCcccc---hhhhhHHHHhcCCCeE
Q psy11600 78 QWIEPMADANVDQYTFHVEPVD-N------------VPQVIRQIKEAGMKVGQV---LQDWIEPMADANVDQY 134 (277)
Q Consensus 78 ~~i~~l~~ag~d~i~~H~e~~d-~------------g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~g~d~i 134 (277)
+..+.+.+.|||+|=+=.|... | --.+|+++++. ..++.+ -.+.++.-.++|+++|
T Consensus 33 ~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT~~~~va~aAl~aGa~iI 104 (280)
T 1eye_A 33 KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMRADVARAALQNGAQMV 104 (280)
T ss_dssp HHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEeCCCHHHHHHHHHcCCCEE
Confidence 3567778899999944443321 1 23445555543 334333 3455666666777776
No 284
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=80.72 E-value=5.2 Score=33.74 Aligned_cols=83 Identities=13% Similarity=0.122 Sum_probs=55.4
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcc--cc-hhhhhH
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVG--QV-LQDWIE 124 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~--d~-p~~~i~ 124 (277)
.+|.++.++.+|+..|++++- +.+.... ...+.+.|++.++.++... .+.+++.+++.+..+. -+ ....+.
T Consensus 128 ~Sf~~~~l~~~~~~~p~~~~~--~l~~~~~--~~~~~~~~~~~i~~~~~~~--~~~~v~~~~~~G~~v~~wtvn~~~~~~ 201 (224)
T 1vd6_A 128 SSFDPLALLALRKAAPGLPLG--FLMAEDH--SALLPCLGVEAVHPHHALV--TEEAVAGWRKRGLFVVAWTVNEEGEAR 201 (224)
T ss_dssp EESCHHHHHHHHHHCTTSCEE--EEESSCC--GGGGGGSCCSEEEEBGGGC--CHHHHHHHHHTTCEEEEECCCCHHHHH
T ss_pred EeCCHHHHHHHHHHCCCCCEE--EEecccc--HHHHHHcCCcEEecCcccC--CHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence 468999999999988887643 2333221 2334567899996666544 4889999988876532 22 233456
Q ss_pred HHHhcCCCeEEe
Q psy11600 125 PMADANVDQYTF 136 (277)
Q Consensus 125 ~~~~~g~d~it~ 136 (277)
.+.+.|+|.|+-
T Consensus 202 ~l~~~GvdgI~T 213 (224)
T 1vd6_A 202 RLLALGLDGLIG 213 (224)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHhcCCCEEEc
Confidence 778899998764
No 285
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=80.60 E-value=7.7 Score=39.31 Aligned_cols=76 Identities=16% Similarity=0.266 Sum_probs=48.6
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCC--------CCHHHHHHHHhc--C-CCCeeeeeeeccCcHHhHHHHHhcC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLT--------FGHPVVKCLRNK--I-PKAFFETHMMVQNPQQWIEPMADAN 87 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~--------~g~~~v~~l~~~--~-~~~~~d~Hlmv~~p~~~i~~l~~ag 87 (277)
.+.++++.|.++|++++.+|=-. ++..+. +-...++.++.. . .+..+.+|+--.+....++.+.+.+
T Consensus 590 ayreeI~~L~~AGa~~IQIDEPa--L~~~L~~~~~d~~~~l~~a~~aln~a~gv~~~~~I~lH~C~G~~~di~~~L~~l~ 667 (766)
T 1t7l_A 590 AINEEVKDLEEAGIKIVQIDEPA--FREKAPIKKSKWPEYFEWAINAFNLAANARPETQIHAHMCYSDFNEIIEYIHQLE 667 (766)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTH--HHHTSCSSGGGHHHHHHHHHHHHHHHTCCCTTSEEEEECCCSCCTTTHHHHTTSC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCc--ccccCCCcchhHHHHHHHHHHHHHHhhcCCCCceEEEEEecCchHHHHHHHHcCC
Confidence 45688899999999999888432 221111 112334444421 1 2456777877777777788888889
Q ss_pred CCeEEEeccCC
Q psy11600 88 VDQYTFHVEPV 98 (277)
Q Consensus 88 ~d~i~~H~e~~ 98 (277)
+|.+ |+|..
T Consensus 668 VD~I--sLE~~ 676 (766)
T 1t7l_A 668 FDVI--SIEAS 676 (766)
T ss_dssp CSEE--EEECT
T ss_pred CCEE--EEecC
Confidence 9988 66643
No 286
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=80.40 E-value=26 Score=30.77 Aligned_cols=111 Identities=14% Similarity=0.178 Sum_probs=67.0
Q ss_pred HHHHHHcCCCEEEEecccccc-----ccC---CCCC--HHHHHHHHhcCCCCeeeeeeecc---CcHHhHH---HHHhcC
Q psy11600 24 SQNLLDSGADYLHLDVMDGTF-----VPN---LTFG--HPVVKCLRNKIPKAFFETHMMVQ---NPQQWIE---PMADAN 87 (277)
Q Consensus 24 ~~~l~~~~~~~~h~DimDg~f-----vp~---~~~g--~~~v~~l~~~~~~~~~d~Hlmv~---~p~~~i~---~l~~ag 87 (277)
-+.++++|+|.+-+ -|+-- .|+ +|+. ....+++++.-+..++.+++=.. +|++.++ ++.++|
T Consensus 30 A~l~e~aG~d~ilv--Gdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~kaG 107 (264)
T 1m3u_A 30 AKLFADEGLNVMLV--GDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAG 107 (264)
T ss_dssp HHHHHHHTCCEEEE--CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEE--CHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHHHHHHcC
Confidence 34567789999766 33110 111 1221 12356676653455677777665 7776664 788899
Q ss_pred CCeEEEeccCCCCCHHHHHHHHhhCCCcc----c------------c----------hhhhhHHHHhcCCCeEEeec
Q psy11600 88 VDQYTFHVEPVDNVPQVIRQIKEAGMKVG----Q------------V----------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 88 ~d~i~~H~e~~d~g~~~i~~i~~~~~~~~----d------------~----------p~~~i~~~~~~g~d~it~H~ 138 (277)
++-+ ++|-...-.+.|+++.+....+. . + -.+....+.++||+.+.+..
T Consensus 108 a~aV--klEgg~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (264)
T 1m3u_A 108 ANMV--KIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLEC 182 (264)
T ss_dssp CSEE--ECCCSGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCEE--EECCcHHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence 9999 88743334667777766542211 0 0 12355678889999888864
No 287
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=80.39 E-value=4 Score=34.92 Aligned_cols=97 Identities=18% Similarity=0.213 Sum_probs=63.5
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCC--cccc-hhhhhH
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMK--VGQV-LQDWIE 124 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~--~~d~-p~~~i~ 124 (277)
.+|.+..++.+|+..|++++- +.+.+.. .+.+...|++.+++|+......+.+++.+++.+.. +.-+ -...+.
T Consensus 136 ~Sf~~~~l~~~~~~~p~~~~~--~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~v~~WTVn~~~~~~ 211 (238)
T 3no3_A 136 ISFNMDACKEFIRLCPKSEVS--YLNGELS--PMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNVWTVDDPKLME 211 (238)
T ss_dssp EESCHHHHHHHHHHCTTSCEE--ECSSCSC--HHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTCEEEEECCCSHHHHH
T ss_pred EECCHHHHHHHHHHCCCCeEE--EEeCCCC--HHHHHHCCCceEeccHHhhhCCHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence 468999999999988887653 2333221 13456678998977765432245688888888765 3333 345667
Q ss_pred HHHhcCCCeEEeecCCCCChHHHHHHHHH
Q psy11600 125 PMADANVDQYTFHVEPVDNVPQVIRQIKE 153 (277)
Q Consensus 125 ~~~~~g~d~it~H~E~~~~~~~~~~~I~~ 153 (277)
.+.+.|+|.|+-= .+..+.+.+++
T Consensus 212 ~l~~~GVdgIiTD-----~P~~~~~~l~~ 235 (238)
T 3no3_A 212 EMIDMGVDFITTD-----LPEETQKILHS 235 (238)
T ss_dssp HHHHHTCSEEEES-----CHHHHHHHHHH
T ss_pred HHHHcCCCEEECC-----CHHHHHHHHHh
Confidence 7889999988852 34555555554
No 288
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=80.32 E-value=6.3 Score=34.07 Aligned_cols=84 Identities=18% Similarity=0.265 Sum_probs=55.6
Q ss_pred CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCC--CeEEEeccCCCCCHHHHHHHHhhCCCc--ccc--hhh
Q psy11600 48 LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANV--DQYTFHVEPVDNVPQVIRQIKEAGMKV--GQV--LQD 121 (277)
Q Consensus 48 ~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~--d~i~~H~e~~d~g~~~i~~i~~~~~~~--~d~--p~~ 121 (277)
.+|.+..++.+|+..|++++- +.+.......+.+.+.|+ +.++.++... .+.+++.+++.+..+ .-+ |++
T Consensus 174 ~Sf~~~~l~~~~~~~p~~~~~--~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~v~~~~~~Gl~v~~wTvn~~~~ 249 (272)
T 3ch0_A 174 QSFDVRALEYMHSQYPDIKLS--YLVETKGTLKKQLEKLSFTPAVYSPDVTLV--SKKDIDAAHKLGMRVIPWTVNTKEE 249 (272)
T ss_dssp EESCHHHHHHHHHHCTTSEEE--EEECSSCCHHHHHTTSSSCCSEEEEBGGGC--CHHHHHHHHHTTCEECCBCCCSHHH
T ss_pred EeCCHHHHHHHHHHCCCCcEE--EEecCCCCHHHHHHHcCCCCcEEccchhhc--CHHHHHHHHHcCCEEEEeccCCHHH
Confidence 368899999999988886543 333333333344455676 8886665544 488999998887553 223 444
Q ss_pred hhHHHHhcCCCeEEe
Q psy11600 122 WIEPMADANVDQYTF 136 (277)
Q Consensus 122 ~i~~~~~~g~d~it~ 136 (277)
+..+.+.|+|.|+-
T Consensus 250 -~~~l~~~GvdgIiT 263 (272)
T 3ch0_A 250 -IETLISLGVDGIIT 263 (272)
T ss_dssp -HHHHHHHTCSEEEE
T ss_pred -HHHHHHcCCCEEEe
Confidence 46778889988764
No 289
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=80.28 E-value=34 Score=30.98 Aligned_cols=104 Identities=18% Similarity=0.168 Sum_probs=68.4
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEec---
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHV--- 95 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~--- 95 (277)
.+.+.++.+.+.|+|.+++-. | .| .++.++.+++. ++++-+. +.++. ++..+.++|+|++.++-
T Consensus 110 ~~~~~~~~~~~~g~~~V~~~~--g--~~----~~~~i~~~~~~--g~~v~~~--v~t~~-~a~~a~~~GaD~i~v~g~~~ 176 (369)
T 3bw2_A 110 GYDAKLAVLLDDPVPVVSFHF--G--VP----DREVIARLRRA--GTLTLVT--ATTPE-EARAVEAAGADAVIAQGVEA 176 (369)
T ss_dssp THHHHHHHHHHSCCSEEEEES--S--CC----CHHHHHHHHHT--TCEEEEE--ESSHH-HHHHHHHTTCSEEEEECTTC
T ss_pred cHHHHHHHHHhcCCCEEEEeC--C--CC----cHHHHHHHHHC--CCeEEEE--CCCHH-HHHHHHHcCCCEEEEeCCCc
Confidence 367888999999999866532 1 11 36889999873 6665543 34555 47778889999998832
Q ss_pred ----cCC-C--------CC-HHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEe
Q psy11600 96 ----EPV-D--------NV-PQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 96 ----e~~-d--------~g-~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~ 136 (277)
... + .+ ...++++++....|+-. |++ +..+.++|||.|.+
T Consensus 177 GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~-~~~~l~~GAd~V~v 236 (369)
T 3bw2_A 177 GGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQ-IAAVLAAGADAAQL 236 (369)
T ss_dssp SEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHH-HHHHHHTTCSEEEE
T ss_pred CCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHH-HHHHHHcCCCEEEE
Confidence 110 0 12 67788888776555432 444 44555689998886
No 290
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=80.05 E-value=1.2 Score=39.90 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=31.8
Q ss_pred hhhHHHHHhhCCC-ccEEEeCCCCcCcHHHHHHccCCC-CCcccccCHHHHHHH-HHhh---CCCCeEEEeCCCCccCHH
Q psy11600 200 MPKVKWLRENYPT-LNIEVDGGVGPNTIDECAKCLTGF-GGQKFMQDMMPKVKW-LREN---YPTLNIEVDGGVGPNTID 273 (277)
Q Consensus 200 l~kI~~l~~~~~~-~~i~vdGgV~~~tv~~~~~~gpg~-ggq~F~~~~~~kI~~-l~~~---~~~~~I~VDGGI~~~~~~ 273 (277)
.+-++.+++..+. ..+.+- --+++.+.+..++|+++ .-..|.++.++++.+ ++.. .++..|++-||||++|++
T Consensus 186 ~~ai~~~r~~~~~~~~i~ve-v~tlee~~~A~~aGaD~I~ld~~~~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~~ni~ 264 (294)
T 3c2e_A 186 TNAVKNARAVCGFAVKIEVE-CLSEDEATEAIEAGADVIMLDNFKGDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLE 264 (294)
T ss_dssp HHHHHHHHHHHCTTSCEEEE-CSSSHHHHHHHHHTCSEEECCC---------------------CCEEEEECCCCC----
T ss_pred HHHHHHHHHhcCcCCeEEEe-cCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhcccccCCCCeEEEEECCCCHHHHH
Confidence 4456666665553 344431 01333455556778886 223344444444333 2222 255889999999999998
Q ss_pred HhhC
Q psy11600 274 ECAK 277 (277)
Q Consensus 274 ~~~~ 277 (277)
.+++
T Consensus 265 ~~~~ 268 (294)
T 3c2e_A 265 EYLC 268 (294)
T ss_dssp --CC
T ss_pred HHHH
Confidence 8753
No 291
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=79.97 E-value=26 Score=31.81 Aligned_cols=145 Identities=8% Similarity=0.041 Sum_probs=90.5
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCC-CCeeeeeeecc-CcHH---hHHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIP-KAFFETHMMVQ-NPQQ---WIEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~-~~~~d~Hlmv~-~p~~---~i~~l~~ag~d 89 (277)
.+...+.++.+++.+.|.+.+=+.+ |+ ++.+..+.++++|+.++ +.++-+..--. ++.+ +++.+.+.|+
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~--g~---~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i- 217 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKV--GA---DWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY- 217 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEEC--CS---CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec--cC---CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-
Confidence 4666778888888888988855433 32 34566788999998874 55543332111 2333 4555666788
Q ss_pred eEEEeccCCCCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCccce
Q psy11600 90 QYTFHVEPVDNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVGL 160 (277)
Q Consensus 90 ~i~~H~e~~d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g~ 160 (277)
|+. +... .....+.+|+.+..|+-. +.++.+.+..-.+|.+.+-+--.+.+. ++.+..++.|+..-.
T Consensus 218 ~iE---~P~~-~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 293 (379)
T 2rdx_A 218 ILE---QPCR-SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVA 293 (379)
T ss_dssp EEE---CCSS-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEe---CCcC-CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 773 3344 567788888877666532 666666666667999999765222233 445556666766666
Q ss_pred eeCCCCCHH
Q psy11600 161 AIKPKTPVD 169 (277)
Q Consensus 161 ~i~p~t~~~ 169 (277)
+...++++.
T Consensus 294 ~~~~es~i~ 302 (379)
T 2rdx_A 294 EDSWGGEIA 302 (379)
T ss_dssp ECSBCSHHH
T ss_pred eeccCcHHH
Confidence 655556553
No 292
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=79.57 E-value=4.4 Score=36.12 Aligned_cols=73 Identities=21% Similarity=0.243 Sum_probs=51.6
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCC---CeeeeeeeccCcHHhHH--HHHhcC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPK---AFFETHMMVQNPQQWIE--PMADAN 87 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~---~~~d~Hlmv~~p~~~i~--~l~~ag 87 (277)
.|+..+.+.++.+.+.|++. +=+-| |...|.-. .+.++.+++.+|+ +++.+|.=-..-..... ...++|
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~--i~l~DT~G~~~P~~v--~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aG 222 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATV--INIPDTVGYTNPTEF--GQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENG 222 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCE--EEEECSSSCCCHHHH--HHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCE--EEecCCCCCCCHHHH--HHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhC
Confidence 56667788889999999998 77778 55565522 2678888988875 67888887655333322 234689
Q ss_pred CCeE
Q psy11600 88 VDQY 91 (277)
Q Consensus 88 ~d~i 91 (277)
++++
T Consensus 223 a~~v 226 (293)
T 3ewb_X 223 ARRV 226 (293)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 9977
No 293
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=79.47 E-value=19 Score=31.44 Aligned_cols=126 Identities=16% Similarity=0.133 Sum_probs=72.8
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHH----HHHHHHhcCCCCeeeeeeec------cCcHHh---HHHHH
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHP----VVKCLRNKIPKAFFETHMMV------QNPQQW---IEPMA 84 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~----~v~~l~~~~~~~~~d~Hlmv------~~p~~~---i~~l~ 84 (277)
..+.+.++.+++.|.++ +-|.||..- +..+ .|+.+++.--....+++-.. .+|.++ ++...
T Consensus 85 g~~~~yl~~~k~lGf~~--iEiS~G~i~----l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~L 158 (251)
T 1qwg_A 85 GKFDEFLNECEKLGFEA--VEISDGSSD----ISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDL 158 (251)
T ss_dssp TCHHHHHHHHHHHTCCE--EEECCSSSC----CCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCE--EEECCCccc----CCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHH
Confidence 37889999999999999 999998653 5543 44444443112333444332 245665 55567
Q ss_pred hcCCCeEEEec-cCCCC-CHHHHHHHHhhCCCcccchhhhhHHH-HhcCCCeEEeecCCCCChHHHHHHHHHhCCcccee
Q psy11600 85 DANVDQYTFHV-EPVDN-VPQVIRQIKEAGMKVGQVLQDWIEPM-ADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLA 161 (277)
Q Consensus 85 ~ag~d~i~~H~-e~~d~-g~~~i~~i~~~~~~~~d~p~~~i~~~-~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~ 161 (277)
+|||+++.+-. |+..+ | .+......-.+.++.+ ...+.+.+.|-+- .......+|+..|-...+|
T Consensus 159 eAGA~~ViiEarEsG~~iG---------i~~~~g~~r~d~v~~i~~~l~~eklifEAp---~k~qq~~fI~~fG~~VNLg 226 (251)
T 1qwg_A 159 DAGADYVIIEGRESGKGKG---------LFDKEGKVKENELDVLAKNVDINKVIFEAP---QKSQQVAFILKFGSSVNLA 226 (251)
T ss_dssp HHTCSEEEECCTTTCCSST---------TBCTTSCBCHHHHHHHHTTSCGGGEEEECC---SHHHHHHHHHHHCTTCCEE
T ss_pred HCCCcEEEEeeecccCCcc---------cCCCCCCCcHHHHHHHHHhCChhhEEEECC---ChHHHHHHHHHhCCCcccc
Confidence 89999995444 22110 0 0111111222333333 3457888888765 5556666788887665554
No 294
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=79.38 E-value=14 Score=33.72 Aligned_cols=146 Identities=12% Similarity=0.113 Sum_probs=86.7
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeecc-CcH---HhHHHHHhcCCCe
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQ-NPQ---QWIEPMADANVDQ 90 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~-~p~---~~i~~l~~ag~d~ 90 (277)
.+...+.++.+++.+.|.+.+-+-+ |. ++.+..+.++++|+.++++++-+..--. ++. ++++.+.+.|++|
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~--g~---~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~ 220 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKV--GR---GEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEF 220 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEC--CS---CHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECc--CC---CHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCE
Confidence 3556677788888888988854433 21 3455678899999875543332221100 233 3567777889999
Q ss_pred EEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCccce
Q psy11600 91 YTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVGL 160 (277)
Q Consensus 91 i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g~ 160 (277)
+. +... .-....+.+++.+..|+-. +.++-+.+.+-.+|.+.+-+-..+.+. ++.+..++.|+..-.
T Consensus 221 iE---qP~~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 297 (384)
T 2pgw_A 221 IE---QPTVSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICI 297 (384)
T ss_dssp EE---CCSCTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEE
T ss_pred Ee---CCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEee
Confidence 84 3332 2466788888887666532 666666666666999998543111222 344555566666555
Q ss_pred eeCCCCCH
Q psy11600 161 AIKPKTPV 168 (277)
Q Consensus 161 ~i~p~t~~ 168 (277)
+...++++
T Consensus 298 ~~~~es~i 305 (384)
T 2pgw_A 298 HSSFTTGI 305 (384)
T ss_dssp CCCSCCHH
T ss_pred ccCcCCHH
Confidence 54445554
No 295
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=79.35 E-value=1.5 Score=39.47 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=43.0
Q ss_pred hhhHHHHHhhCCC--ccEEEeCCCCcCcHHHHHHccCCC-CCcccccCHHHHHHHHHhhC-CCCeEEEeCCCCccCHHHh
Q psy11600 200 MPKVKWLRENYPT--LNIEVDGGVGPNTIDECAKCLTGF-GGQKFMQDMMPKVKWLRENY-PTLNIEVDGGVGPNTIDEC 275 (277)
Q Consensus 200 l~kI~~l~~~~~~--~~i~vdGgV~~~tv~~~~~~gpg~-ggq~F~~~~~~kI~~l~~~~-~~~~I~VDGGI~~~~~~~~ 275 (277)
.+.++.+++..+. +.++++ +++.+.+..++|+++ .-..|.+ +.++++++.. ++..|++-||||++|++.+
T Consensus 196 ~~ai~~~r~~~~~~kI~vev~---tlee~~eA~~aGaD~I~ld~~~~---e~l~~~v~~~~~~~~I~ASGGIt~~~i~~~ 269 (296)
T 1qap_A 196 RQAVEKAFWLHPDVPVEVEVE---NLDELDDALKAGADIIMLDNFNT---DQMREAVKRVNGQARLEVSGNVTAETLREF 269 (296)
T ss_dssp HHHHHHHHHHSTTSCEEEEES---SHHHHHHHHHTTCSEEEESSCCH---HHHHHHHHTTCTTCCEEECCCSCHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEeC---CHHHHHHHHHcCCCEEEECCCCH---HHHHHHHHHhCCCCeEEEECCCCHHHHHHH
Confidence 3456666776665 444432 333444456677775 2222333 4455544433 4688999999999999887
Q ss_pred h
Q psy11600 276 A 276 (277)
Q Consensus 276 ~ 276 (277)
+
T Consensus 270 a 270 (296)
T 1qap_A 270 A 270 (296)
T ss_dssp H
T ss_pred H
Confidence 5
No 296
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=78.97 E-value=18 Score=32.28 Aligned_cols=118 Identities=11% Similarity=0.070 Sum_probs=71.2
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCC-C-------HH---HHHHHHhcC--CCCeeeeeee---c---cCc
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTF-G-------HP---VVKCLRNKI--PKAFFETHMM---V---QNP 76 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~-g-------~~---~v~~l~~~~--~~~~~d~Hlm---v---~~p 76 (277)
+..+..+..+++++.|+..+ .|-|+.+.|-.+. | .. .|+..++.- +++.+-+-.= . .+.
T Consensus 92 ~~~~~~~~v~~l~~aGa~gv--~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~a 169 (295)
T 1xg4_A 92 SAFNVARTVKSMIKAGAAGL--HIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAA 169 (295)
T ss_dssp SHHHHHHHHHHHHHHTCSEE--EEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEE--EECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHH
Confidence 45566778888999999995 5668765443221 1 12 344444431 2222222111 0 112
Q ss_pred HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCccc--c------hhhhhHHHHhcCCCeEEeec
Q psy11600 77 QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQ--V------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 77 ~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d--~------p~~~i~~~~~~g~d~it~H~ 138 (277)
.+-.+.+.++|||.+.+|. .. ..+.++.+.+.-..|.. + |..-.++|.+.|++.+++..
T Consensus 170 i~ra~ay~eAGAd~i~~e~--~~-~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~ 236 (295)
T 1xg4_A 170 IERAQAYVEAGAEMLFPEA--IT-ELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPL 236 (295)
T ss_dssp HHHHHHHHHTTCSEEEETT--CC-SHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHHcCCCEEEEeC--CC-CHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCEEEECh
Confidence 2235677899999997664 21 35677777776555542 1 55567999999999999965
No 297
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=78.79 E-value=25 Score=30.30 Aligned_cols=150 Identities=14% Similarity=0.176 Sum_probs=0.0
Q ss_pred eeeccCcHH-----hHHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhhCCCcccc----hhhhhHHHHhcCCCeEE
Q psy11600 70 HMMVQNPQQ-----WIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEAGMKVGQV----LQDWIEPMADANVDQYT 135 (277)
Q Consensus 70 Hlmv~~p~~-----~i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~~~~~~d~----p~~~i~~~~~~g~d~it 135 (277)
|++..+|.. .++.+.++|+|.| -+-..+| ..++++++|+ +..|+-. +..+ ++|+|.+.
T Consensus 11 ~it~gDP~~~~t~~~~~~l~~~GaD~I--elG~S~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~n~i-----~~gvDg~i 82 (234)
T 2f6u_A 11 HITKLDPDRTNTDEIIKAVADSGTDAV--MISGTQNVTYEKARTLIEKVSQ-YGLPIVVEPSDPSNV-----VYDVDYLF 82 (234)
T ss_dssp EEEEECTTSCCCHHHHHHHHTTTCSEE--EECCCTTCCHHHHHHHHHHHTT-SCCCEEECCSSCCCC-----CCCSSEEE
T ss_pred EEEeeCCCccccHHHHHHHHHcCCCEE--EECCCCCCCHHHHHHHHHHhcC-CCCCEEEecCCcchh-----hcCCCEEE
Q ss_pred eecCCCCChHHHH-----HHH-------HHhC-----Cccce----eeCCCC------------CHHhHHHHHhhcC---
Q psy11600 136 FHVEPVDNVPQVI-----RQI-------KEAG-----MKVGL----AIKPKT------------PVDVIAEYIESAD--- 179 (277)
Q Consensus 136 ~H~E~~~~~~~~~-----~~I-------~~~g-----~~~g~----~i~p~t------------~~~~i~~~i~~~d--- 179 (277)
+.-=|-+.-.... +.+ ++.| ...=. -++|++ +.+.+..+.....
T Consensus 83 ipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l 162 (234)
T 2f6u_A 83 VPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLF 162 (234)
T ss_dssp EEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTT
T ss_pred EcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhc
Q ss_pred --ceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCc-CcHHHHHHccCC
Q psy11600 180 --LVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKCLTG 235 (277)
Q Consensus 180 --~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~-~tv~~~~~~gpg 235 (277)
-.+-+.. -|.++. .+.++++++...++-+.+-|||+- ++++++.+ |++
T Consensus 163 ~~~~Vyl~~-~G~~~~------~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd 213 (234)
T 2f6u_A 163 NLPIIYIEY-SGTYGN------PELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YAD 213 (234)
T ss_dssp CCSEEEEEC-TTSCCC------HHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSS
T ss_pred CCCEEEEeC-CCCcch------HHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCC
No 298
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=78.76 E-value=4.1 Score=34.81 Aligned_cols=173 Identities=13% Similarity=0.131 Sum_probs=52.3
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCCCh
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVDNV 144 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~ 144 (277)
++.+.++.+.++|+++++++--..++ ....++.+++....|+-+ -.+.++.+.++|||.|.+-.+.-.++
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~dp 115 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENP 115 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHCT
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhCh
Confidence 67888999999999999766211111 467899999888777654 23447777789999998865410022
Q ss_pred HHHHHHHHHhCCcc-ceeeCCC------------------CCHHhHHHHHhh--cCceEEEEecCCCCCchhhhhhhhhH
Q psy11600 145 PQVIRQIKEAGMKV-GLAIKPK------------------TPVDVIAEYIES--ADLVLIMTVEPGFGGQKFMQDMMPKV 203 (277)
Q Consensus 145 ~~~~~~I~~~g~~~-g~~i~p~------------------t~~~~i~~~i~~--~d~vl~mav~Pgt~gq~~~~~~l~kI 203 (277)
..+.+..+..|..+ -+++... .....+.+.+.. ++.+.+..+.+....+.+. ++.+
T Consensus 116 ~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g~~---~~~~ 192 (247)
T 3tdn_A 116 SLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYD---TEMI 192 (247)
T ss_dssp HHHHHHHHHHC---------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcCCCC---HHHH
Confidence 22334444444111 1122211 011111122222 3444444433321111111 2223
Q ss_pred HHHHhhCCCccEEEeCCCC-cCcHHHHHHccCCC---CCcccc-cCHHHHHHH
Q psy11600 204 KWLRENYPTLNIEVDGGVG-PNTIDECAKCLTGF---GGQKFM-QDMMPKVKW 251 (277)
Q Consensus 204 ~~l~~~~~~~~i~vdGgV~-~~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~ 251 (277)
+++++. .++.+..-|||+ .+.+.++.++|++. |+..+. |+...++++
T Consensus 193 ~~i~~~-~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~~~~~ 244 (247)
T 3tdn_A 193 RFVRPL-TTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQ 244 (247)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHh-CCCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHHHHHHHH
Confidence 333332 245567788887 78888888887764 544443 455555543
No 299
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=78.66 E-value=33 Score=32.65 Aligned_cols=139 Identities=16% Similarity=0.233 Sum_probs=71.7
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc-hhhhhHHHHhcCCCeEEeecCCCCC-hHHHHHHHH
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV-LQDWIEPMADANVDQYTFHVEPVDN-VPQVIRQIK 152 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~-p~~~i~~~~~~g~d~it~H~E~~~~-~~~~~~~I~ 152 (277)
||.++++.+.+||+.++.+=..-.||-- +-. .+.+.--+.. |.. | +-.+ +.++.+.++
T Consensus 63 d~~~W~~~~k~aGakyvvlt~kHHdGF~-lw~--S~~t~~~v~~~p~~--------~---------~krDiv~el~~A~r 122 (478)
T 3ues_A 63 DVDQWMDALVAGGMAGVILTCKHHDGFC-LWP--SRLTRHTVASSPWR--------E---------GKGDLVREVSESAR 122 (478)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCB-SSC--CTTCSCBGGGSSGG--------G---------GTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeEEecCCcc-ccC--CCCCCcccccCCcc--------C---------CCCCHHHHHHHHHH
Confidence 7899999999999999866433333300 000 0000000000 100 0 0001 235556677
Q ss_pred HhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCC-chhhhhhhhhHHHHHhhC-CCccEEEeCCCCcCcHHHHH
Q psy11600 153 EAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGG-QKFMQDMMPKVKWLRENY-PTLNIEVDGGVGPNTIDECA 230 (277)
Q Consensus 153 ~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~g-q~~~~~~l~kI~~l~~~~-~~~~i~vdGgV~~~tv~~~~ 230 (277)
+.|++.|+-..+-.- -+|.++- +.|...+...+.+|...+ +-..++.||+-..
T Consensus 123 ~~gl~~g~Y~S~~d~------------------~~~~y~~~~~y~~~~~~ql~EL~~~Yg~~~~~W~Dg~~~~------- 177 (478)
T 3ues_A 123 RHGLKFGVYLSPWDR------------------TEESYGKGKAYDDFYVGQLTELLTQYGPIFSVWLDGANGE------- 177 (478)
T ss_dssp HTTCEEEEEECSCCS------------------SCTTTTSSHHHHHHHHHHHHHHHHSSSCCSEEEECCCCCC-------
T ss_pred HcCCeEEEEeChHHh------------------CCcccCchHHHHHHHHHHHHHHHhcCCcceEEEeeCCCCC-------
Confidence 778777777654211 1344332 357777777787776544 4457999987531
Q ss_pred HccCCCCCcccccCHHHHHHHHHhhCCCCeEE
Q psy11600 231 KCLTGFGGQKFMQDMMPKVKWLRENYPTLNIE 262 (277)
Q Consensus 231 ~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~ 262 (277)
||....+.+ +..+-.+.+|+++|++.|.
T Consensus 178 --~~~~~~~~~--~~~~~~~~i~~~qP~~vi~ 205 (478)
T 3ues_A 178 --GKNGKTQYY--DWDRYYNVIRSLQPDAVIS 205 (478)
T ss_dssp --CTTSCCCCC--CHHHHHHHHHHHCTTSEEE
T ss_pred --CCccchhhh--hHHHHHHHHHHHCcCEEEE
Confidence 232111222 2233344556778887663
No 300
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=78.40 E-value=11 Score=33.78 Aligned_cols=78 Identities=14% Similarity=0.078 Sum_probs=54.0
Q ss_pred HHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCC--Ccccc----hhhhhHH
Q psy11600 52 HPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGM--KVGQV----LQDWIEP 125 (277)
Q Consensus 52 ~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~--~~~d~----p~~~i~~ 125 (277)
...++..|+.+|..+ +-+-+.++ ++++...++|+|+|-+ |. +.+..++.+++... .++.+ -.+-+..
T Consensus 196 ~~ai~~~r~~~~~~k--I~vev~tl-ee~~eA~~aGaD~I~l--d~--~~~e~l~~~v~~~~~~~~I~ASGGIt~~~i~~ 268 (296)
T 1qap_A 196 RQAVEKAFWLHPDVP--VEVEVENL-DELDDALKAGADIIML--DN--FNTDQMREAVKRVNGQARLEVSGNVTAETLRE 268 (296)
T ss_dssp HHHHHHHHHHSTTSC--EEEEESSH-HHHHHHHHTTCSEEEE--SS--CCHHHHHHHHHTTCTTCCEEECCCSCHHHHHH
T ss_pred HHHHHHHHHhCCCCc--EEEEeCCH-HHHHHHHHcCCCEEEE--CC--CCHHHHHHHHHHhCCCCeEEEECCCCHHHHHH
Confidence 467888888777632 33355566 4566677899999954 43 45777777766542 23333 5788899
Q ss_pred HHhcCCCeEEe
Q psy11600 126 MADANVDQYTF 136 (277)
Q Consensus 126 ~~~~g~d~it~ 136 (277)
++++|+|+|++
T Consensus 269 ~a~~GvD~isv 279 (296)
T 1qap_A 269 FAETGVDFISV 279 (296)
T ss_dssp HHHTTCSEEEC
T ss_pred HHHcCCCEEEE
Confidence 99999999987
No 301
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=78.15 E-value=17 Score=32.46 Aligned_cols=58 Identities=12% Similarity=0.069 Sum_probs=32.4
Q ss_pred cHHhHHHHHhcCCCeEEEeccCCC-C------------CHHHHHHHHhhCCCcccc---hhhhhHHHHhcCCCeE
Q psy11600 76 PQQWIEPMADANVDQYTFHVEPVD-N------------VPQVIRQIKEAGMKVGQV---LQDWIEPMADANVDQY 134 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~H~e~~d-~------------g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~g~d~i 134 (277)
..+....+.+.|||+|=+=.|... | --.+|+++++. ..|+.+ -.+.++.-.++|+++|
T Consensus 48 a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~-~vpiSIDT~~~~Va~aAl~aGa~iI 121 (294)
T 2y5s_A 48 ALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL-NVPLSIDTYKPAVMRAALAAGADLI 121 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-CSCEEEECCCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-CCeEEEECCCHHHHHHHHHcCCCEE
Confidence 334567788899999944444432 2 23344455443 334433 3445556666677766
No 302
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=77.97 E-value=26 Score=31.55 Aligned_cols=93 Identities=15% Similarity=0.239 Sum_probs=55.9
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCC-----C--------CHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcC
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLT-----F--------GHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADAN 87 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~-----~--------g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag 87 (277)
-+..+++.+.|+|. +||-=-.--|.-. . =.++|+.+++. +++|+.++- .+|+ .++...++|
T Consensus 52 l~~A~~~v~~GAdI--IDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~-~~vpISIDT--~~~~-Va~aAl~aG 125 (314)
T 3tr9_A 52 LRTAEKMVDEGADI--LDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKR-FPQLISVDT--SRPR-VMREAVNTG 125 (314)
T ss_dssp HHHHHHHHHTTCSE--EEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHH-CCSEEEEEC--SCHH-HHHHHHHHT
T ss_pred HHHHHHHHHCCCCE--EEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhh-CCCeEEEeC--CCHH-HHHHHHHcC
Confidence 34445566789999 8885212234322 0 02467778775 577777653 3454 455666679
Q ss_pred CCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecC
Q psy11600 88 VDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 88 ~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E 139 (277)
+++| -|+.-+ ..| +.++..+++|+.+|.+|..
T Consensus 126 a~iI---NDVsg~----------------~~~-~m~~v~a~~g~~vVlMh~~ 157 (314)
T 3tr9_A 126 ADMI---NDQRAL----------------QLD-DALTTVSALKTPVCLMHFP 157 (314)
T ss_dssp CCEE---EETTTT----------------CST-THHHHHHHHTCCEEEECCC
T ss_pred CCEE---EECCCC----------------Cch-HHHHHHHHhCCeEEEECCC
Confidence 9988 233211 012 4567778899999999964
No 303
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=77.86 E-value=1.6 Score=39.38 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=39.1
Q ss_pred hHHHHHhhCCCccEEEeCCCCcCcHHHH---HHccCCC-CCcccccCHHHHHHHHHh-hCCCCeEEEeCCCCccCHHHhh
Q psy11600 202 KVKWLRENYPTLNIEVDGGVGPNTIDEC---AKCLTGF-GGQKFMQDMMPKVKWLRE-NYPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 202 kI~~l~~~~~~~~i~vdGgV~~~tv~~~---~~~gpg~-ggq~F~~~~~~kI~~l~~-~~~~~~I~VDGGI~~~~~~~~~ 276 (277)
-++.+++..|...++|. ++|.+++ .++|++. -=-.|. .+.+++..+ ..++..|++-||||++|++.++
T Consensus 199 Av~~~r~~~p~~~ieVE----vdtlde~~eAl~aGaD~I~LDn~~---~~~l~~av~~i~~~v~ieaSGGI~~~~i~~~a 271 (298)
T 3gnn_A 199 ALDAAFALNAEVPVQIE----VETLDQLRTALAHGARSVLLDNFT---LDMMRDAVRVTEGRAVLEVSGGVNFDTVRAIA 271 (298)
T ss_dssp HHHHHHHHC--CCCEEE----ESSHHHHHHHHHTTCEEEEEESCC---HHHHHHHHHHHTTSEEEEEESSCSTTTHHHHH
T ss_pred HHHHHHHhCCCCCEEEE----eCCHHHHHHHHHcCCCEEEECCCC---HHHHHHHHHHhCCCCeEEEEcCCCHHHHHHHH
Confidence 45556666665544442 4566554 4556553 011222 334443332 3567889999999999999875
No 304
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=77.72 E-value=7.7 Score=34.98 Aligned_cols=122 Identities=17% Similarity=0.176 Sum_probs=87.0
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeee-----------------ee
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETH-----------------MM 72 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~H-----------------lm 72 (277)
|=.|..|-..-.+.+.+..+.|..++=+|--.-+|-.|+...-++++..++. ++.+++= -.
T Consensus 76 PValHLDHg~~~e~~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~--gvsVEaELG~igG~Ed~~~~~~~~~~ 153 (307)
T 3n9r_A 76 PVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNA--GVSVEAELGRLMGIEDNISVDEKDAV 153 (307)
T ss_dssp CEEEEEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHT--TCEEEEEESCCCCC----------CC
T ss_pred cEEEECCCCCCHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHc--CCeEEEEeeeeccccCCccccccccc
Confidence 4455566665456666777789999888887778888888888888887764 5555432 23
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCC----------CCHHHHHHHHhhCCCcc------cchhhhhHHHHhcCCCe
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVD----------NVPQVIRQIKEAGMKVG------QVLQDWIEPMADANVDQ 133 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d----------~g~~~i~~i~~~~~~~~------d~p~~~i~~~~~~g~d~ 133 (277)
..+|++-.+.+.+.|+|++.+=+-..- .-++.++.|++.+..|+ .+|.+|++.+-++|.++
T Consensus 154 yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~gg~~ 230 (307)
T 3n9r_A 154 LVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDL 230 (307)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhcCcc
Confidence 468988888777899999965443221 26788999977755543 24999999999888876
No 305
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=77.66 E-value=12 Score=32.67 Aligned_cols=124 Identities=11% Similarity=0.002 Sum_probs=70.0
Q ss_pred eEeeeccccCcccHHH---HHHHHHHc-CCCEEEEeccc-cccccCCCCCHHHHHHHHhcCCCCeeeee-eeccCcHHhH
Q psy11600 7 MIGPSILNSDLSNLHS---ESQNLLDS-GADYLHLDVMD-GTFVPNLTFGHPVVKCLRNKIPKAFFETH-MMVQNPQQWI 80 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~---~~~~l~~~-~~~~~h~DimD-g~fvp~~~~g~~~v~~l~~~~~~~~~d~H-lmv~~p~~~i 80 (277)
.+.|+.. ...+.++ ..+.+.+. |.+++.+|+.- .... +.-..+.++..|+. ..-.+.+- +.+.++ +.+
T Consensus 67 ~~~pn~~--~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~~--~~e~~~~~~~a~~~-~~~g~~vi~~~~~~~-~~a 140 (264)
T 1xm3_A 67 TLLPNTA--GASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSL--LPDPVETLKASEQL-LEEGFIVLPYTSDDV-VLA 140 (264)
T ss_dssp EEEEECT--TCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTC--CBCHHHHHHHHHHH-HHTTCCEEEEECSCH-HHH
T ss_pred eEcCCcc--ccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCccc--ccchHHHHHHHHHH-HCCCeEEEEEcCCCH-HHH
Confidence 3445442 3345554 34445554 67898888743 2111 01123566766653 11122232 334455 467
Q ss_pred HHHHhcCCCeEEEeccCCCC------CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEee
Q psy11600 81 EPMADANVDQYTFHVEPVDN------VPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 81 ~~l~~ag~d~i~~H~e~~d~------g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H 137 (277)
+++.+.|++++ +..-...| ++..++.+++.+..|+-+ -.+-+..+.++|||.+.+-
T Consensus 141 ~~~~~~gad~v-~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVG 207 (264)
T 1xm3_A 141 RKLEELGVHAI-MPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLN 207 (264)
T ss_dssp HHHHHHTCSCB-EECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHhCCCEE-EECCcccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEc
Confidence 78888999998 34211111 588999999987766543 1344677788899988773
No 306
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=77.49 E-value=9.3 Score=35.20 Aligned_cols=113 Identities=13% Similarity=0.176 Sum_probs=63.3
Q ss_pred hhhhHHHHhcCCCeEEeecCCCCChHHHH---HHHHHh--CCccceeeCCCCCHHhHHHHHhh-cCceEEEEecCCCCC-
Q psy11600 120 QDWIEPMADANVDQYTFHVEPVDNVPQVI---RQIKEA--GMKVGLAIKPKTPVDVIAEYIES-ADLVLIMTVEPGFGG- 192 (277)
Q Consensus 120 ~~~i~~~~~~g~d~it~H~E~~~~~~~~~---~~I~~~--g~~~g~~i~p~t~~~~i~~~i~~-~d~vl~mav~Pgt~g- 192 (277)
.+.++.+.++|+|.|.++.-. .+..... +.+++. +.....| ..++.+....+.+. +|.+.+ ...||..-
T Consensus 110 ~~~~~~lieaGvd~I~idta~-G~~~~~~~~I~~ik~~~p~v~Vi~G--~v~t~e~A~~a~~aGAD~I~v-G~gpGs~~~ 185 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSH-GHSEGVLQRIRETRAAYPHLEIIGG--NVATAEGARALIEAGVSAVKV-GIGPGSICT 185 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSC-TTSHHHHHHHHHHHHHCTTCEEEEE--EECSHHHHHHHHHHTCSEEEE-CSSCSTTBC
T ss_pred HHHHHHHHhCCCCEEEEeCCC-CCCHHHHHHHHHHHHhcCCCceEee--eeCCHHHHHHHHHcCCCEEEE-ecCCCCCCC
Confidence 578999999999999885421 1233343 444443 2221111 12445555555543 777664 55566421
Q ss_pred chhh----hhhhhhHHHHHhh--CCCccEEEeCCC-CcCcHHHHHHccCCC
Q psy11600 193 QKFM----QDMMPKVKWLREN--YPTLNIEVDGGV-GPNTIDECAKCLTGF 236 (277)
Q Consensus 193 q~~~----~~~l~kI~~l~~~--~~~~~i~vdGgV-~~~tv~~~~~~gpg~ 236 (277)
.... ...+..+.++.+. ..++.+..+||| +...+..+.++|++.
T Consensus 186 tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~ 236 (366)
T 4fo4_A 186 TRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASC 236 (366)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred cccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCE
Confidence 0000 1122334444332 235789999999 567888888888885
No 307
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=77.06 E-value=3.2 Score=37.75 Aligned_cols=71 Identities=21% Similarity=0.211 Sum_probs=51.6
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC---cHHhHHHHHhcCCCe
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN---PQQWIEPMADANVDQ 90 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~---p~~~i~~l~~ag~d~ 90 (277)
|+..+.+.++.+.+.|++. +=+-| |...|.-. .+.++.+++.+|++++.+|.=-.. ..+.+.. .++|+++
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~--i~l~DT~G~~~P~~v--~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laA-v~aGa~~ 241 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIER--IFLPDTLGVLSPEET--FQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQA-IRAGVKG 241 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSE--EEEECTTCCCCHHHH--HHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHH-HHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCE--EEEecCCCCcCHHHH--HHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHH-HHhCCCE
Confidence 4566678888899999999 77778 55555422 367889998888999999986654 3334433 4579998
Q ss_pred E
Q psy11600 91 Y 91 (277)
Q Consensus 91 i 91 (277)
+
T Consensus 242 v 242 (337)
T 3ble_A 242 L 242 (337)
T ss_dssp E
T ss_pred E
Confidence 8
No 308
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=76.46 E-value=8.2 Score=35.04 Aligned_cols=85 Identities=18% Similarity=0.214 Sum_probs=49.2
Q ss_pred CCceEeeeccc---cCcccHHHHHHHHHHcCCCEEEEeccccccccC------CCCCHHHHHHHHhcCCCCeeeeeeecc
Q psy11600 4 VQCMIGPSILN---SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPN------LTFGHPVVKCLRNKIPKAFFETHMMVQ 74 (277)
Q Consensus 4 ~~~~~~~s~~~---~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~------~~~g~~~v~~l~~~~~~~~~d~Hlmv~ 74 (277)
+.++|+|.=+. .+..+..+-++.|++.|+|++|+-. |.+.+. -.+..+.++.+|+. .++|+-+-=-+.
T Consensus 222 V~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~--g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~ 298 (349)
T 3hgj_A 222 LFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS--GGVVLRVRIPLAPGFQVPFADAVRKR-VGLRTGAVGLIT 298 (349)
T ss_dssp EEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC--CCSCSSSCCCCCTTTTHHHHHHHHHH-HCCEEEECSSCC
T ss_pred EEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec--CCcCcccccCCCccccHHHHHHHHHH-cCceEEEECCCC
Confidence 34566664221 1223344556778899999977653 333221 12456789999986 566664433333
Q ss_pred CcHHhHHHHHhcC-CCeEE
Q psy11600 75 NPQQWIEPMADAN-VDQYT 92 (277)
Q Consensus 75 ~p~~~i~~l~~ag-~d~i~ 92 (277)
+++. ++.+.+.| +|.+.
T Consensus 299 t~e~-a~~~l~~G~aD~V~ 316 (349)
T 3hgj_A 299 TPEQ-AETLLQAGSADLVL 316 (349)
T ss_dssp CHHH-HHHHHHTTSCSEEE
T ss_pred CHHH-HHHHHHCCCceEEE
Confidence 5554 44555566 99883
No 309
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=75.98 E-value=30 Score=31.73 Aligned_cols=83 Identities=13% Similarity=0.084 Sum_probs=55.0
Q ss_pred CCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE--eccC-CCCC---HHHHHHHHhhCCCcccc-----
Q psy11600 50 FGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF--HVEP-VDNV---PQVIRQIKEAGMKVGQV----- 118 (277)
Q Consensus 50 ~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~--H~e~-~d~g---~~~i~~i~~~~~~~~d~----- 118 (277)
+..+.|+++|+. .++|+-+-. +.. .+.++.+.++|+|.|.+ |... .+++ ...++++++....|+-.
T Consensus 212 ~~~~~i~~i~~~-~~~Pv~vkg-v~t-~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pVia~GGI~ 288 (380)
T 1p4c_A 212 FNWEALRWLRDL-WPHKLLVKG-LLS-AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSGFR 288 (380)
T ss_dssp CCHHHHHHHHHH-CCSEEEEEE-ECC-HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCEEECSSCC
T ss_pred ccHHHHHHHHHh-cCCCEEEEe-cCc-HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeEEEECCCC
Confidence 345789999987 688888764 434 45688899999999988 6432 2222 33556666544334322
Q ss_pred -hhhhhHHHHhcCCCeEEe
Q psy11600 119 -LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 -p~~~i~~~~~~g~d~it~ 136 (277)
+.+..+.++ +|||.+.+
T Consensus 289 ~~~dv~kal~-~GAdaV~i 306 (380)
T 1p4c_A 289 RGSDIVKALA-LGAEAVLL 306 (380)
T ss_dssp SHHHHHHHHH-TTCSCEEE
T ss_pred CHHHHHHHHH-hCCcHhhe
Confidence 667777665 78888877
No 310
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=75.96 E-value=3.7 Score=36.50 Aligned_cols=72 Identities=13% Similarity=0.174 Sum_probs=51.4
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcH---HhHHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQ---QWIEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~---~~i~~l~~ag~d 89 (277)
.|+..+.+-++.+.+.|++. +=+-| |...|.-. .+.++.+++.+|++++.+|.--..-. +.+. ..++|++
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~--i~l~DT~G~~~P~~~--~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~la-A~~aGa~ 227 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYE--ISLGDTIGVGTPGIM--KDMLSAVMQEVPLAALAVHCHDTYGQALANTLM-ALQMGVS 227 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSE--EEEEETTSCCCHHHH--HHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHH-HHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCE--EEecCCCCCcCHHHH--HHHHHHHHHhCCCCeEEEEECCCCchHHHHHHH-HHHhCCC
Confidence 36777888888999999999 55567 55555422 36788899888888999998654422 3333 3568999
Q ss_pred eE
Q psy11600 90 QY 91 (277)
Q Consensus 90 ~i 91 (277)
++
T Consensus 228 ~v 229 (298)
T 2cw6_A 228 VV 229 (298)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 311
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=75.77 E-value=8 Score=39.36 Aligned_cols=21 Identities=24% Similarity=0.414 Sum_probs=18.3
Q ss_pred cHHHHHHHHHHcCCCEEEEec
Q psy11600 19 NLHSESQNLLDSGADYLHLDV 39 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~Di 39 (277)
-+.+|++.|.++|+.+|.+|=
T Consensus 617 A~r~Ei~~L~~AG~r~IQiDE 637 (789)
T 3ppg_A 617 ALRDEVNDLEGAGITVIQVDE 637 (789)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcc
Confidence 466889999999999999994
No 312
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=75.71 E-value=17 Score=31.77 Aligned_cols=113 Identities=12% Similarity=0.043 Sum_probs=71.4
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCC-----CCHHHHHHHHhc----CCCCeeeeeeec------------cCcHHh
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLT-----FGHPVVKCLRNK----IPKAFFETHMMV------------QNPQQW 79 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~-----~g~~~v~~l~~~----~~~~~~d~Hlmv------------~~p~~~ 79 (277)
.+..+++.+.|+..+|+ -||...+.-. --.+.|+.+++. -+++.+-.|.=. ....+-
T Consensus 96 ~~~~~~l~~aGa~gv~i--Ed~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~r 173 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINV--EDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKR 173 (255)
T ss_dssp HHHHHHHHHTTCCEEEE--CSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEE--CCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHH
Confidence 56677888899999775 4764222110 112556666654 344556676553 112223
Q ss_pred HHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc---h-----hhhhHHHHhcCCCeEEeec
Q psy11600 80 IEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV---L-----QDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 80 i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~---p-----~~~i~~~~~~g~d~it~H~ 138 (277)
.+.+.++|||.+.++. .. ..+.++.+.+.-..|..+ | .--+++|.+.|+..|++..
T Consensus 174 a~a~~eAGAd~i~~e~--~~-~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~~~~ 237 (255)
T 2qiw_A 174 IKLMEQAGARSVYPVG--LS-TAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGP 237 (255)
T ss_dssp HHHHHHHTCSEEEECC--CC-SHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHHHTTCCEEECTT
T ss_pred HHHHHHcCCcEEEEcC--CC-CHHHHHHHHHhCCCCEEEEecCCCCCCCCCHHHHHHcCCCEEEEHH
Confidence 5677889999996543 22 356778887766555543 3 3458999999999999975
No 313
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=75.69 E-value=29 Score=29.52 Aligned_cols=142 Identities=18% Similarity=0.142 Sum_probs=78.2
Q ss_pred hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCH---------HhHHHHHhh-cCceEEEEecC
Q psy11600 119 LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPV---------DVIAEYIES-ADLVLIMTVEP 188 (277)
Q Consensus 119 p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~---------~~i~~~i~~-~d~vl~mav~P 188 (277)
+.+.++...+.|++.|++|.. .+....+.++..+.+ ++--.+.|. .+.++.++. +|-+ -|.+|.
T Consensus 21 i~~l~~~a~~~~~~aVcv~p~---~v~~~~~~l~~~~v~--v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdev-d~vini 94 (220)
T 1ub3_A 21 VAKAAEEALEYGFYGLCIPPS---YVAWVRARYPHAPFR--LVTVVGFPLGYQEKEVKALEAALACARGADEV-DMVLHL 94 (220)
T ss_dssp HHHHHHHHHHHTCSEEECCGG---GHHHHHHHCTTCSSE--EEEEESTTTCCSCHHHHHHHHHHHHHTTCSEE-EEECCH
T ss_pred HHHHHHHHHHhCCCEEEECHH---HHHHHHHHhCCCCce--EEEEecCCCCCCchHHHHHHHHHHHHcCCCEE-Eecccc
Confidence 456778888899999999876 554444443322222 222234443 234444432 2322 245577
Q ss_pred CCCCchhhhhhhhhHHHHHhhCCC--ccEEEeCCCCcCcHHH-------HHHccCCC--CCcccc--cCHHHHHHHHHhh
Q psy11600 189 GFGGQKFMQDMMPKVKWLRENYPT--LNIEVDGGVGPNTIDE-------CAKCLTGF--GGQKFM--QDMMPKVKWLREN 255 (277)
Q Consensus 189 gt~gq~~~~~~l~kI~~l~~~~~~--~~i~vdGgV~~~tv~~-------~~~~gpg~--ggq~F~--~~~~~kI~~l~~~ 255 (277)
|.--.....++++.|..+++...+ +.+.+.- ...|-++ +.++|++| -+-.|. ..+.+.++.+++.
T Consensus 95 g~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet--~~l~~e~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~ 172 (220)
T 1ub3_A 95 GRAKAGDLDYLEAEVRAVREAVPQAVLKVILET--GYFSPEEIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRV 172 (220)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCG--GGSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHH
T ss_pred hhhhCCCHHHHHHHHHHHHHHHcCCCceEEEec--CCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHh
Confidence 631011345667777777776543 3332211 1223333 46689998 222233 3466777777763
Q ss_pred -CCCCeEEEeCCCC
Q psy11600 256 -YPTLNIEVDGGVG 268 (277)
Q Consensus 256 -~~~~~I~VDGGI~ 268 (277)
.....|-+-|||+
T Consensus 173 vg~~v~VkaaGGir 186 (220)
T 1ub3_A 173 AQGRAQVKAAGGIR 186 (220)
T ss_dssp HTTSSEEEEESSCC
T ss_pred hCCCCeEEEECCCC
Confidence 4567899999999
No 314
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=75.68 E-value=35 Score=30.18 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=64.3
Q ss_pred HHHHHHcCCCEEEEecccccc-----ccC---CCCC--HHHHHHHHhcCCCCeeeeeeec----cCcHHhHH---HHHhc
Q psy11600 24 SQNLLDSGADYLHLDVMDGTF-----VPN---LTFG--HPVVKCLRNKIPKAFFETHMMV----QNPQQWIE---PMADA 86 (277)
Q Consensus 24 ~~~l~~~~~~~~h~DimDg~f-----vp~---~~~g--~~~v~~l~~~~~~~~~d~Hlmv----~~p~~~i~---~l~~a 86 (277)
-+.++++|+|.+- +-|+-- .|+ +|+. ....+++++.-+..++.+++=. .+|++.++ ++.++
T Consensus 30 A~l~e~aG~d~il--vGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~ka 107 (275)
T 1o66_A 30 AALMDDAGVEMLL--VGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAELMAA 107 (275)
T ss_dssp HHHHHHTTCCEEE--ECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEE--ECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHHHHHHHc
Confidence 3457788999973 334111 111 1222 1245666665344567777655 25776654 78889
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcc----cch---------------------hhhhHHHHhcCCCeEEeec
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVG----QVL---------------------QDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~----d~p---------------------~~~i~~~~~~g~d~it~H~ 138 (277)
|++-+ ++|-...-.+.|+++.+....+. ..| .+....+.++||+.+.+..
T Consensus 108 Ga~aV--klEdg~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 108 GAHMV--KLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp TCSEE--EEECSGGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEES
T ss_pred CCcEE--EECCcHHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 99999 87743334667777766543211 112 2244567788888887754
No 315
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=75.51 E-value=11 Score=38.09 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=45.6
Q ss_pred cHHHHHHHHHHcCCCEEEEecccc-ccccCCCCC-----HHHHHHHHhcCCC----CeeeeeeeccCcHHhHHHHHhcCC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDG-TFVPNLTFG-----HPVVKCLRNKIPK----AFFETHMMVQNPQQWIEPMADANV 88 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg-~fvp~~~~g-----~~~v~~l~~~~~~----~~~d~Hlmv~~p~~~i~~l~~ag~ 88 (277)
.+.++++.|.++|++++.+|=-.- ...|--..+ ...++.++..... ..+.+|+=-.+...-++.+.+.++
T Consensus 586 a~~~ev~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~~~~~~~~v~~~~~i~~HiC~G~~~~i~~~l~~~~~ 665 (765)
T 1u1j_A 586 AIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSIIDMDA 665 (765)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTTSCSSSEEEEECSCSCCTTTHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCCEEEECCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeccCCcHHHHHHHHhCCC
Confidence 466788899999999998886542 222222223 2334455543322 335555544555556777778888
Q ss_pred CeEEEecc
Q psy11600 89 DQYTFHVE 96 (277)
Q Consensus 89 d~i~~H~e 96 (277)
|.+ .+|
T Consensus 666 D~i--slE 671 (765)
T 1u1j_A 666 DVI--TIE 671 (765)
T ss_dssp SEE--ECC
T ss_pred CEE--EEe
Confidence 888 455
No 316
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=75.46 E-value=17 Score=33.40 Aligned_cols=72 Identities=11% Similarity=0.083 Sum_probs=44.9
Q ss_pred eeeeeeecc-CcHHhHHHHHhcCCCeEEEeccCCC--CCHHHHHHHHhhC-CCcccc----hhhhhHHHHhcCCCeEEee
Q psy11600 66 FFETHMMVQ-NPQQWIEPMADANVDQYTFHVEPVD--NVPQVIRQIKEAG-MKVGQV----LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 66 ~~d~Hlmv~-~p~~~i~~l~~ag~d~i~~H~e~~d--~g~~~i~~i~~~~-~~~~d~----p~~~i~~~~~~g~d~it~H 137 (277)
++-+-+... +-.+.++.+.++|+|.+.+|.-..+ ...+.|+++|+.+ ..++-+ -.+.++.+.++|+|.|.+-
T Consensus 143 ~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 143 RVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp CCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEEC
T ss_pred eEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEEC
Confidence 345555432 2234577788899999976432211 1356778888886 444332 3456777888899988883
No 317
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=75.43 E-value=20 Score=25.79 Aligned_cols=83 Identities=11% Similarity=0.093 Sum_probs=54.0
Q ss_pred eeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCC
Q psy11600 67 FETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~ 140 (277)
+.+. .+.+..+.++.+.+...|.+.+.+...+. |.++++.+|+....++-+ .........++|++-+-.-+-
T Consensus 27 ~~v~-~~~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~- 104 (120)
T 3f6p_A 27 YEVH-CAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPF- 104 (120)
T ss_dssp CEEE-EESSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSCHHHHHHHHHTTCCEEEEESC-
T ss_pred EEEE-EeCCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCChHHHHHHHhCCcceeEcCCC-
Confidence 3444 36678777888888788888776664333 788899998765444322 234455667889876555544
Q ss_pred CCChHHHHHHHHH
Q psy11600 141 VDNVPQVIRQIKE 153 (277)
Q Consensus 141 ~~~~~~~~~~I~~ 153 (277)
+...+...+++
T Consensus 105 --~~~~l~~~i~~ 115 (120)
T 3f6p_A 105 --STRELLARVKA 115 (120)
T ss_dssp --CHHHHHHHHHH
T ss_pred --CHHHHHHHHHH
Confidence 56666666654
No 318
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=75.10 E-value=31 Score=30.48 Aligned_cols=58 Identities=17% Similarity=0.051 Sum_probs=33.5
Q ss_pred HHhHHHHHhcCCCeEEEeccCC-CC------------CHHHHHHHHhhCCCcccc---hhhhhHHHHhcCCCeEE
Q psy11600 77 QQWIEPMADANVDQYTFHVEPV-DN------------VPQVIRQIKEAGMKVGQV---LQDWIEPMADANVDQYT 135 (277)
Q Consensus 77 ~~~i~~l~~ag~d~i~~H~e~~-d~------------g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~g~d~it 135 (277)
.+..+.+.+.|||+|=+=.|.. .| --.+|+++++ ...++.+ -...++.-.++||++|-
T Consensus 33 ~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT~~~~Va~~al~aGa~iIN 106 (270)
T 4hb7_A 33 INRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG-FDVKISVDTFRSEVAEACLKLGVDMIN 106 (270)
T ss_dssp HHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT-SSSEEEEECSCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc-CCCeEEEECCCHHHHHHHHHhccceec
Confidence 3457778889999994333332 11 3345666654 2334433 34556666778888765
No 319
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=74.70 E-value=5.7 Score=39.27 Aligned_cols=117 Identities=9% Similarity=0.122 Sum_probs=71.9
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccc-----------------------cccccCCCCCHHHHHHHHhcCC-CCeeeeeeec
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMD-----------------------GTFVPNLTFGHPVVKCLRNKIP-KAFFETHMMV 73 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimD-----------------------g~fvp~~~~g~~~v~~l~~~~~-~~~~d~Hlmv 73 (277)
..+.+..++++++|.|. |+|-= |.+-....|-.++++++|+..+ +.++-+-|-.
T Consensus 156 ~~f~~aA~~a~~aGfDg--Veih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~ 233 (690)
T 3k30_A 156 RWHRNAVRRSIEAGYDI--VYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITV 233 (690)
T ss_dssp HHHHHHHHHHHHHTCSE--EEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCE--EEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECc
Confidence 34566777788899999 55522 2222333466789999998764 5667666633
Q ss_pred cC----------cHHhHHHHHhcCCCeEEEeccC--------C--C--CCHHHHHHHHhhCCCcccc------hhhhhHH
Q psy11600 74 QN----------PQQWIEPMADANVDQYTFHVEP--------V--D--NVPQVIRQIKEAGMKVGQV------LQDWIEP 125 (277)
Q Consensus 74 ~~----------p~~~i~~l~~ag~d~i~~H~e~--------~--d--~g~~~i~~i~~~~~~~~d~------p~~~i~~ 125 (277)
.+ ..+.++.+.+ ++|++++|.-. . . .....++.+|+..+.|+-. |+.-.+.
T Consensus 234 ~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~ 312 (690)
T 3k30_A 234 EEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQ 312 (690)
T ss_dssp CCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHH
Confidence 32 2223555555 89999988631 0 0 1246777888877665532 5554444
Q ss_pred HHhcCCCeEEee
Q psy11600 126 MADANVDQYTFH 137 (277)
Q Consensus 126 ~~~~g~d~it~H 137 (277)
+.+-+||.|.|-
T Consensus 313 l~~g~~d~v~~g 324 (690)
T 3k30_A 313 IKAGILDLIGAA 324 (690)
T ss_dssp HHTTSCSEEEES
T ss_pred HHCCCcceEEEc
Confidence 444459999984
No 320
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=74.67 E-value=13 Score=33.10 Aligned_cols=78 Identities=12% Similarity=0.175 Sum_probs=64.9
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEe
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFH 94 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H 94 (277)
+.+-++..+.+++.|+|+|=+=|=- |.|-.+-.+.++.++++++. .++|+..|==..-|.+.+++..+.|+.-+-+.
T Consensus 154 ~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~-~~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~ 232 (286)
T 1gvf_A 154 LTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREV-VDVPLVLHGASDVPDEFVRRTIELGVTKVNVA 232 (286)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHH-CCSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCCHHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHh-cCCCEEEECCCCCCHHHHHHHHHCCCeEEEEC
Confidence 4677888888989999998887766 65644445777999999987 78999999999999999999999999888444
Q ss_pred c
Q psy11600 95 V 95 (277)
Q Consensus 95 ~ 95 (277)
-
T Consensus 233 T 233 (286)
T 1gvf_A 233 T 233 (286)
T ss_dssp H
T ss_pred h
Confidence 3
No 321
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=74.64 E-value=2.8 Score=37.65 Aligned_cols=72 Identities=15% Similarity=0.254 Sum_probs=51.9
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC---cHHhHHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN---PQQWIEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~---p~~~i~~l~~ag~d 89 (277)
.|+..+.+-++.+.+.|++. +=+-| |...|+-. .+.++.+|+.+|++++.+|.=-.. ..+.+.. .++|++
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~--i~l~DT~G~~~P~~v--~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laA-v~aGa~ 228 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISE--LSLGDTIGAANPAQV--ETVLEALLARFPANQIALHFHDTRGTALANMVTA-LQMGIT 228 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSC--EEEECSSCCCCHHHH--HHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHH-HHHTCC
T ss_pred CCHHHHHHHHHHHHhcCCCE--EEEcCCCCCcCHHHH--HHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHH-HHhCCC
Confidence 46677788888899999999 66778 55555522 367888998888889999985433 3334433 467999
Q ss_pred eE
Q psy11600 90 QY 91 (277)
Q Consensus 90 ~i 91 (277)
++
T Consensus 229 ~v 230 (307)
T 1ydo_A 229 VF 230 (307)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 322
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=74.60 E-value=24 Score=32.36 Aligned_cols=79 Identities=10% Similarity=0.116 Sum_probs=50.1
Q ss_pred HHhcCCCCeeeeeeecc-----CcHHhH-HHHHhcCCCeEEEeccCC----------CC---CHHHHHHHHhhCCCcccc
Q psy11600 58 LRNKIPKAFFETHMMVQ-----NPQQWI-EPMADANVDQYTFHVEPV----------DN---VPQVIRQIKEAGMKVGQV 118 (277)
Q Consensus 58 l~~~~~~~~~d~Hlmv~-----~p~~~i-~~l~~ag~d~i~~H~e~~----------d~---g~~~i~~i~~~~~~~~d~ 118 (277)
+|+..|+.++..-+-.- ...+++ +.....+++.+.+|+... ++ -.+.|+++++.+..|+-+
T Consensus 113 vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPViv 192 (368)
T 3vkj_A 113 VRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIV 192 (368)
T ss_dssp HHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEE
T ss_pred HHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEE
Confidence 45445888888877772 222333 334445666666687532 11 245788888877666533
Q ss_pred -------hhhhhHHHHhcCCCeEEe
Q psy11600 119 -------LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 -------p~~~i~~~~~~g~d~it~ 136 (277)
-.+-+..+.++|+|.|++
T Consensus 193 K~vG~g~s~~~A~~l~~aGad~I~V 217 (368)
T 3vkj_A 193 KESGNGISMETAKLLYSYGIKNFDT 217 (368)
T ss_dssp ECSSSCCCHHHHHHHHHTTCCEEEC
T ss_pred EeCCCCCCHHHHHHHHhCCCCEEEE
Confidence 345678889999999998
No 323
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=74.56 E-value=40 Score=28.80 Aligned_cols=118 Identities=12% Similarity=0.146 Sum_probs=79.0
Q ss_pred cccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEE
Q psy11600 13 LNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYT 92 (277)
Q Consensus 13 ~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~ 92 (277)
++.|+.+ ..+...+.|+|++|+==.|+.+-. -.-..++++.+.+. +.+|+.+.==+.+.+ .++.+.++|++.+.
T Consensus 29 ~~~dP~~---~a~~~~~~gad~lhvvDld~a~~~-~~~~~~~i~~i~~~-~~~pl~vGGGIrs~e-~~~~~l~~GadkVi 102 (243)
T 4gj1_A 29 YKYNPLK---KFKEYEKAGAKELHLVDLTGAKDP-SKRQFALIEKLAKE-VSVNLQVGGGIRSKE-EVKALLDCGVKRVV 102 (243)
T ss_dssp CCCCHHH---HHHHHHHHTCCEEEEEEHHHHHCG-GGCCHHHHHHHHHH-CCSEEEEESSCCCHH-HHHHHHHTTCSEEE
T ss_pred eCCCHHH---HHHHHHHCCCCEEEEEecCccccc-chhHHHHHHHHHHh-cCCCeEeccccccHH-HHHHHHHcCCCEEE
Confidence 4445554 456677789999997444544421 12345789999886 788888877777765 57778889999996
Q ss_pred EeccCCCCCHHHHHHHHhh-CCC--c--ccc--------------------hhhhhHHHHhcCCCeEEee
Q psy11600 93 FHVEPVDNVPQVIRQIKEA-GMK--V--GQV--------------------LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 93 ~H~e~~d~g~~~i~~i~~~-~~~--~--~d~--------------------p~~~i~~~~~~g~d~it~H 137 (277)
+=-.+.. .|.+++++.+. ... . +|. +.+|++.+.+.|+.-+-++
T Consensus 103 i~t~a~~-~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t 171 (243)
T 4gj1_A 103 IGSMAIK-DATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCT 171 (243)
T ss_dssp ECTTTTT-CHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEE
T ss_pred Ecccccc-CCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEee
Confidence 6544433 57888766553 222 1 121 6778888888888877776
No 324
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=74.53 E-value=12 Score=37.83 Aligned_cols=76 Identities=16% Similarity=0.186 Sum_probs=43.9
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccc-cccCCCCC-----HHHHHHHHhcCCC----CeeeeeeeccCcHHhHHHHHhcCC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGT-FVPNLTFG-----HPVVKCLRNKIPK----AFFETHMMVQNPQQWIEPMADANV 88 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~-fvp~~~~g-----~~~v~~l~~~~~~----~~~d~Hlmv~~p~~~i~~l~~ag~ 88 (277)
.+.++++.|.++|++++.+|=-... ..|--..+ ...++.++..... ..+.+|+=-.+...-++.+.+.++
T Consensus 571 a~~~ei~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~l~~~~~~v~~~~~i~~HiC~G~~~~i~~~L~~~~a 650 (755)
T 2nq5_A 571 AIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKFDEIIDAIRALDA 650 (755)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSCTTSEEEEEECCSCCSTTHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeccCCcHHHHHHHHhCCC
Confidence 4667888999999999988865411 22221122 2234444443222 345566554555555677777788
Q ss_pred CeEEEecc
Q psy11600 89 DQYTFHVE 96 (277)
Q Consensus 89 d~i~~H~e 96 (277)
|.+ .+|
T Consensus 651 D~i--slE 656 (755)
T 2nq5_A 651 DVI--SIE 656 (755)
T ss_dssp SEE--EC-
T ss_pred CEE--EEe
Confidence 887 444
No 325
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=74.14 E-value=53 Score=31.91 Aligned_cols=55 Identities=7% Similarity=0.043 Sum_probs=32.5
Q ss_pred HHHHHhcCCCeEEEeccC--CCC---CHHHHHHHHhhCCCcccc---hhhhhHHHHhc--CCCeE
Q psy11600 80 IEPMADANVDQYTFHVEP--VDN---VPQVIRQIKEAGMKVGQV---LQDWIEPMADA--NVDQY 134 (277)
Q Consensus 80 i~~l~~ag~d~i~~H~e~--~d~---g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~--g~d~i 134 (277)
.+.+.+.|||+|-+-... .+. -.++++.+++.+..|+.+ -.+.++.-.++ |+++|
T Consensus 346 A~~~v~~GAdiIDIgpg~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~~G~~iI 410 (566)
T 1q7z_A 346 AKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAYPGRSLF 410 (566)
T ss_dssp HHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHCSSCCEE
T ss_pred HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhcCCCCEE
Confidence 566778999999444322 111 345666666665555544 34455555666 88776
No 326
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=74.11 E-value=48 Score=29.94 Aligned_cols=128 Identities=12% Similarity=0.173 Sum_probs=69.1
Q ss_pred cCcHHhHHHHH-hcCCCeEEEeccCCCC---------CHHHHHHHHhhCCCcc--c-----c-hhhhhHHHHhcCCC---
Q psy11600 74 QNPQQWIEPMA-DANVDQYTFHVEPVDN---------VPQVIRQIKEAGMKVG--Q-----V-LQDWIEPMADANVD--- 132 (277)
Q Consensus 74 ~~p~~~i~~l~-~ag~d~i~~H~e~~d~---------g~~~i~~i~~~~~~~~--d-----~-p~~~i~~~~~~g~d--- 132 (277)
.++.++.++.. +.|||+|-+..+..+- -.+.|+.+++....|+ | - -.+.++.-.++|++
T Consensus 80 ~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~ 159 (323)
T 4djd_D 80 NEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENL 159 (323)
T ss_dssp TCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred HhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCC
Confidence 36778888887 8899999877775432 3345677776665554 3 2 23455666666654
Q ss_pred -eEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHH---HHhhcCc--eEEEEecCCCC-CchhhhhhhhhHHH
Q psy11600 133 -QYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAE---YIESADL--VLIMTVEPGFG-GQKFMQDMMPKVKW 205 (277)
Q Consensus 133 -~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~---~i~~~d~--vl~mav~Pgt~-gq~~~~~~l~kI~~ 205 (277)
.-++..| ..+.+.+.+++.| +.+.+..-..++...+ .+.+.++ -- +.++||++ ..+-.++.++.++.
T Consensus 160 lINsv~~~---~~~~m~~laa~~g--~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~-IIlDPg~g~fgk~~e~~l~~l~~ 233 (323)
T 4djd_D 160 LLGNAEQE---NYKSLTAACMVHK--HNIIARSPLDINICKQLNILINEMNLPLDH-IVIDPSIGGLGYGIEYSFSIMER 233 (323)
T ss_dssp EEEEEBTT---BCHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTCCGGG-EEEECCCCCTTTTHHHHHHHHHH
T ss_pred eEEECCcc---cHHHHHHHHHHhC--CeEEEEccchHHHHHHHHHHHHHcCCCHHH-EEEeCCCccccCCHHHHHHHHHH
Confidence 2344444 4456777777765 2333322212333332 3344433 11 23589885 22334444555555
Q ss_pred HH
Q psy11600 206 LR 207 (277)
Q Consensus 206 l~ 207 (277)
++
T Consensus 234 ir 235 (323)
T 4djd_D 234 IR 235 (323)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 327
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=74.07 E-value=14 Score=36.91 Aligned_cols=116 Identities=14% Similarity=0.128 Sum_probs=73.9
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccc----------------------cccCCCCCHHHHHHHHhcCC-CCeeeeeeec--
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGT----------------------FVPNLTFGHPVVKCLRNKIP-KAFFETHMMV-- 73 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~----------------------fvp~~~~g~~~v~~l~~~~~-~~~~d~Hlmv-- 73 (277)
.+.+..++++++|.|. |+|.=++ +-....|-.++++++|+..+ +.++-+-|-.
T Consensus 150 ~f~~aA~~a~~aGfDg--VEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 150 FYVDAAKRSRDAGFDI--VYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp HHHHHHHHHHHTTCSE--EEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCE--EEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 5566777788899999 6664433 22223455788999998753 6777776632
Q ss_pred ----------cCcHHhHHHHHhcCCCeEEEeccC--------C-C-----C-CHHHHHHHHhhCCCcccc------hhhh
Q psy11600 74 ----------QNPQQWIEPMADANVDQYTFHVEP--------V-D-----N-VPQVIRQIKEAGMKVGQV------LQDW 122 (277)
Q Consensus 74 ----------~~p~~~i~~l~~ag~d~i~~H~e~--------~-d-----~-g~~~i~~i~~~~~~~~d~------p~~~ 122 (277)
.+..+..+.+.+ ++|.+++|.-. . . + ....++.+|+..+.|+-. |+..
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a 306 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKM 306 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHH
T ss_pred CcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHH
Confidence 223344555554 79999888632 0 0 0 256788899887666532 6665
Q ss_pred hHHHHhcCCCeEEee
Q psy11600 123 IEPMADANVDQYTFH 137 (277)
Q Consensus 123 i~~~~~~g~d~it~H 137 (277)
.+.+.+-+||.|.|-
T Consensus 307 ~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 307 IEIVTKGYADIIGCA 321 (729)
T ss_dssp HHHHHTTSCSBEEES
T ss_pred HHHHHCCCCCEEEeC
Confidence 555555559999984
No 328
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=73.93 E-value=20 Score=26.08 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=55.6
Q ss_pred eeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCC-cccc-----hhhhhHHHHhcCCCeEEeecC
Q psy11600 67 FETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMK-VGQV-----LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~-~~d~-----p~~~i~~~~~~g~d~it~H~E 139 (277)
+.+.-.+.+..+.++.+.+...|.+.+..+..+. |.++++.+|+.... ++-+ .........++|++.+-.-.-
T Consensus 26 ~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~ 105 (134)
T 3f6c_A 26 IEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKE 105 (134)
T ss_dssp EEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGGG
T ss_pred cEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCC
Confidence 4443356777878888887888888777665433 78899999887532 3322 234666777899886655544
Q ss_pred CCCChHHHHHHHHHh
Q psy11600 140 PVDNVPQVIRQIKEA 154 (277)
Q Consensus 140 ~~~~~~~~~~~I~~~ 154 (277)
+...+.+.++.+
T Consensus 106 ---~~~~l~~~i~~~ 117 (134)
T 3f6c_A 106 ---GMNNIIAAIEAA 117 (134)
T ss_dssp ---CTHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHH
Confidence 556777777654
No 329
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=73.91 E-value=43 Score=28.86 Aligned_cols=167 Identities=13% Similarity=0.165 Sum_probs=0.0
Q ss_pred eeeccCcHHh-----HHHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhhCCCcccc----hhhhhHHHHhcCCCeEE
Q psy11600 70 HMMVQNPQQW-----IEPMADANVDQYTFHVEPVDN-----VPQVIRQIKEAGMKVGQV----LQDWIEPMADANVDQYT 135 (277)
Q Consensus 70 Hlmv~~p~~~-----i~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~~~~~~d~----p~~~i~~~~~~g~d~it 135 (277)
|+...+|.+. ++.+.++|+|.| -+--.+| ..++++++|+ +..|+-. |+.+.+ |+|.+.
T Consensus 14 h~~~~DPdk~~~~~~l~~~~~~GtDaI--~vGgs~gvt~~~~~~~v~~ik~-~~~Piil~p~~~~~~~~-----gaD~il 85 (235)
T 3w01_A 14 HIFKLDPAKHISDDDLDAICMSQTDAI--MIGGTDDVTEDNVIHLMSKIRR-YPLPLVLEISNIESVMP-----GFDFYF 85 (235)
T ss_dssp EEEEECTTSCCCHHHHHHHHTSSCSEE--EECCSSCCCHHHHHHHHHHHTT-SCSCEEEECCCSTTCCT-----TCSEEE
T ss_pred EEEeECCCCcCCHHHHHHHHHcCCCEE--EECCcCCcCHHHHHHHHHHhcC-cCCCEEEecCCHHHhhc-----CCCEEE
Q ss_pred eecCCCCChHHH-----HHHHHHhCC-----ccce----eeCCCCCHHh---------HHHHHhhc---------CceEE
Q psy11600 136 FHVEPVDNVPQV-----IRQIKEAGM-----KVGL----AIKPKTPVDV---------IAEYIESA---------DLVLI 183 (277)
Q Consensus 136 ~H~E~~~~~~~~-----~~~I~~~g~-----~~g~----~i~p~t~~~~---------i~~~i~~~---------d~vl~ 183 (277)
|..=+-..-.+. .+.+++.|. ..=. -++|+++... .+.....+ +++-+
T Consensus 86 ~pslln~~~~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~ 165 (235)
T 3w01_A 86 VPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYI 165 (235)
T ss_dssp EEEETTBSSGGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred EccccCCCCcchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEE
Q ss_pred EEecCCCCCchhhhhhhhhHHHHHhhCCCccEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHh
Q psy11600 184 MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRE 254 (277)
Q Consensus 184 mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~ 254 (277)
-+ .|+.|. .+.++++++..+++-+.+=|||+ |-++..++-.|.-+-.......+..+.+++
T Consensus 166 e~--sG~~g~------~~~v~~ir~~~~~~pv~vGfGI~--~~e~a~~~~~gAD~VVVGSai~~~~~~~~e 226 (235)
T 3w01_A 166 EY--SGIYGD------VSKVQAVSEHLTETQLFYGGGIS--SEQQATEMAAIADTIIVGDIIYKDIKKALK 226 (235)
T ss_dssp EC--TTSCCC------HHHHHHHHTTCSSSEEEEESCCC--SHHHHHHHHTTSSEEEECTHHHHCHHHHHH
T ss_pred ec--CCCcCC------HHHHHHHHHhcCCCCEEEECCcC--CHHHHHHHHcCCCEEEECCceecCHHHHHH
No 330
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=73.87 E-value=34 Score=30.55 Aligned_cols=99 Identities=8% Similarity=-0.042 Sum_probs=53.7
Q ss_pred cccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCH----HHHHHHH---hcCCCCeeeeeeeccCcHHhHHHHHh
Q psy11600 13 LNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGH----PVVKCLR---NKIPKAFFETHMMVQNPQQWIEPMAD 85 (277)
Q Consensus 13 ~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~----~~v~~l~---~~~~~~~~d~Hlmv~~p~~~i~~l~~ 85 (277)
...|+...-+..++..+.|+|. +||==| . +.+. .. +++..++ +. +++|+.++- .+|+- ++...+
T Consensus 32 ~~~~~~~a~~~A~~~v~~GAdi--IDIg~g-~-~~v~-~~eem~rvv~~i~~~~~~-~~vpisIDT--~~~~V-~eaaL~ 102 (300)
T 3k13_A 32 NEKKYDEALSIARQQVEDGALV--IDVNMD-D-GLLD-ARTEMTTFLNLIMSEPEI-ARVPVMIDS--SKWEV-IEAGLK 102 (300)
T ss_dssp HTTCHHHHHHHHHHHHHTTCSE--EEEECC-C-TTSC-HHHHHHHHHHHHHTCHHH-HTSCEEEEC--SCHHH-HHHHHH
T ss_pred hcCCHHHHHHHHHHHHHCCCCE--EEECCC-C-CCCC-HHHHHHHHHHHHHHhhhc-CCCeEEEeC--CCHHH-HHHHHH
Confidence 3445555555666677889999 777422 1 1111 11 2333332 22 466665543 34543 445555
Q ss_pred --cCCCeEEEeccCCC--CCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeec
Q psy11600 86 --ANVDQYTFHVEPVD--NVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 86 --ag~d~i~~H~e~~d--~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~ 138 (277)
+|+++| -++.- +.+.+ +..++..+++|+.+|.+|.
T Consensus 103 ~~~Ga~iI---NdIs~~~~d~~~---------------~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 103 CLQGKSIV---NSISLKEGEEVF---------------LEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp HCSSCCEE---EEECSTTCHHHH---------------HHHHHHHHHHTCEEEEESE
T ss_pred hcCCCCEE---EeCCcccCChhH---------------HHHHHHHHHhCCeEEEEee
Confidence 699877 22221 11111 1356777899999999997
No 331
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=73.52 E-value=42 Score=28.62 Aligned_cols=142 Identities=11% Similarity=0.122 Sum_probs=76.1
Q ss_pred CceEeeeccc-cCcccHHHHHHHHHHcCCCEEE--EeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeecc-------
Q psy11600 5 QCMIGPSILN-SDLSNLHSESQNLLDSGADYLH--LDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQ------- 74 (277)
Q Consensus 5 ~~~~~~s~~~-~d~~~l~~~~~~l~~~~~~~~h--~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~------- 74 (277)
+.+|..+|.. -+...+.++.+.+.+.|+|.+= +|..+. + +...=.+.++.+|+...++|+-+++-..
T Consensus 3 ~p~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~-~--~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~ 79 (238)
T 1sfl_A 3 HVEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFEN-V--TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQ 79 (238)
T ss_dssp CCEEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTT-C--CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBC
T ss_pred CCeEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEeccccc-C--CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCC
Confidence 3578889998 8888888888888777877643 343331 1 1111124456677642378998888543
Q ss_pred -CcHHhHHHHH---hc-CCCeEEEeccCCCC-CHH----HHHHHHhhCCC----cccc---h--hh---hhHHHHhcCCC
Q psy11600 75 -NPQQWIEPMA---DA-NVDQYTFHVEPVDN-VPQ----VIRQIKEAGMK----VGQV---L--QD---WIEPMADANVD 132 (277)
Q Consensus 75 -~p~~~i~~l~---~a-g~d~i~~H~e~~d~-g~~----~i~~i~~~~~~----~~d~---p--~~---~i~~~~~~g~d 132 (277)
+.++|++.+. +. ++|++ .+|.... ... +++..++.+.+ .|+. | ++ ++..+.+.|||
T Consensus 80 ~~~~~~~~ll~~~~~~~~~d~i--DvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaD 157 (238)
T 1sfl_A 80 FTNDSYLNLISDLANINGIDMI--DIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPE 157 (238)
T ss_dssp CCHHHHHHHHHHGGGCTTCCEE--EEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHHHHHhCCCCEE--EEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCC
Confidence 3455655554 44 58999 5554320 333 34444443332 2332 4 33 34556677888
Q ss_pred eEEeecCCCCChHHHHHHHH
Q psy11600 133 QYTFHVEPVDNVPQVIRQIK 152 (277)
Q Consensus 133 ~it~H~E~~~~~~~~~~~I~ 152 (277)
.+=+=.-|. +..+.++.++
T Consensus 158 ivKia~~a~-~~~D~l~ll~ 176 (238)
T 1sfl_A 158 YVKLAVMPH-NKNDVLNLLQ 176 (238)
T ss_dssp EEEEEECCS-SHHHHHHHHH
T ss_pred EEEEEecCC-CHHHHHHHHH
Confidence 665544321 3556555554
No 332
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=73.12 E-value=21 Score=32.12 Aligned_cols=118 Identities=10% Similarity=0.069 Sum_probs=75.3
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ag~d 89 (277)
.|...+.++.+++.+.|.+.+-+-+ |+ +++.+..+.++++|+.+ +++++-+..--. ++. ++++.+.+.|++
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~--g~--~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 218 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRI--GY--PALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVT 218 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEEC--CC--SSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec--CC--CCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 3555667778888888988855443 32 24456678899999876 455443332111 233 356777888999
Q ss_pred eEEEeccCC-CCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecC
Q psy11600 90 QYTFHVEPV-DNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 90 ~i~~H~e~~-d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E 139 (277)
|+- +.. .......+.+++.+..|+-. +.++.+.+.+-.+|.+.+-+-
T Consensus 219 ~iE---~P~~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (359)
T 1mdl_A 219 WIE---EPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAM 272 (359)
T ss_dssp CEE---CCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred eEE---CCCChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecch
Confidence 983 222 12466788888877666532 666666666667999998765
No 333
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=73.10 E-value=50 Score=29.29 Aligned_cols=171 Identities=11% Similarity=0.069 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeee---------eccC-cH---HhHHHHHh
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHM---------MVQN-PQ---QWIEPMAD 85 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hl---------mv~~-p~---~~i~~l~~ 85 (277)
+++.-+..+.+.|++. +.=.-.|+......-+...++.++-+|+ ...+ +- ..++...+
T Consensus 49 ~~k~lv~~~~~~~~~a---------vl~~~g~~~~a~~~~~~~~~~~glil~l~~~~~l~~~~~~~~l~~~~~~ve~a~~ 119 (304)
T 1to3_A 49 DFKVNAAKILSPYASA---------VLLDQQFCYRQAVEQNAVAKSCAMIVAADDFIPGNGIPVDNVVLDKKINAQAVKR 119 (304)
T ss_dssp HHHHHHHHHHGGGCSE---------EEECTTTTHHHHHHTTCSCTTSEEEEECEEEEEETTEEEEEEEECSSCCHHHHHH
T ss_pred hHHHHHHHHHhcCCCE---------EEeCHHHHHHHhhcccccCCCCcEEEEECCCCCCCCCccchhhccCchhHHHHHH
Q ss_pred cCCCeEEEeccCCCC---------CHHHHHHHHhhCCC-cccc------------h----hhhhHHHHhcCCCeEEeec-
Q psy11600 86 ANVDQYTFHVEPVDN---------VPQVIRQIKEAGMK-VGQV------------L----QDWIEPMADANVDQYTFHV- 138 (277)
Q Consensus 86 ag~d~i~~H~e~~d~---------g~~~i~~i~~~~~~-~~d~------------p----~~~i~~~~~~g~d~it~H~- 138 (277)
.|+|.+.++.-.-.. ..++.+..+++... .+++ | ..-+..+.+.|+|++-+|+
T Consensus 120 ~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~ 199 (304)
T 1to3_A 120 DGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMP 199 (304)
T ss_dssp TTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCG
T ss_pred cCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCC
Q ss_pred ----CCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCcc
Q psy11600 139 ----EPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLN 214 (277)
Q Consensus 139 ----E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~ 214 (277)
. +...+.+.++.. .+-++. -
T Consensus 200 ~~~~g---~~~~~~~vv~~~--------------------------------~~~~~~---------------------P 223 (304)
T 1to3_A 200 LYGKG---ARSDLLTASQRL--------------------------------NGHINM---------------------P 223 (304)
T ss_dssp GGGCS---CHHHHHHHHHHH--------------------------------HHTCCS---------------------C
T ss_pred cCCCC---CHHHHHHHHHhc--------------------------------cccCCC---------------------C
Q ss_pred -EEEeCCCCcCc----HHHHHHccCCC---CCccccc-----CHHHHH--------HHHHh
Q psy11600 215 -IEVDGGVGPNT----IDECAKCLTGF---GGQKFMQ-----DMMPKV--------KWLRE 254 (277)
Q Consensus 215 -i~vdGgV~~~t----v~~~~~~gpg~---ggq~F~~-----~~~~kI--------~~l~~ 254 (277)
+.+.||++.++ ++.++++|+.. |...|.+ +..+.. ++|++
T Consensus 224 ~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~ 284 (304)
T 1to3_A 224 WVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGE 284 (304)
T ss_dssp EEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHHHHHTHHHHHHHHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccccCCCHHHHHHhhchHHHHHHHH
No 334
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=73.07 E-value=11 Score=34.48 Aligned_cols=65 Identities=11% Similarity=0.160 Sum_probs=41.5
Q ss_pred HHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeE
Q psy11600 23 ESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQY 91 (277)
Q Consensus 23 ~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i 91 (277)
-.+.|++.|+|++|+-- +.+...-.+..+.++.+|+. .++|+-+-=-+ ++++..+.+.+-++|.+
T Consensus 256 ~a~~l~~~G~d~i~v~~--~~~~~~~~~~~~~~~~v~~~-~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 256 LIEELAKRGIAYLHMSE--TDLAGGKPYSEAFRQKVRER-FHGVIIGAGAY-TAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp HHHHHHHTTCSEEEEEC--CBTTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHhCCCEEEEec--CcccCCCcccHHHHHHHHHH-CCCCEEEECCc-CHHHHHHHHHCCCccEE
Confidence 46788999999987753 22221112456789999987 56776554334 56655554444449988
No 335
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=73.01 E-value=53 Score=30.43 Aligned_cols=126 Identities=12% Similarity=0.073 Sum_probs=79.7
Q ss_pred eccccCcccHHHHHHHHHHcCCCEEEEeccc-------c------cccc------C---------CCCCHHHHHHHHhcC
Q psy11600 11 SILNSDLSNLHSESQNLLDSGADYLHLDVMD-------G------TFVP------N---------LTFGHPVVKCLRNKI 62 (277)
Q Consensus 11 s~~~~d~~~l~~~~~~l~~~~~~~~h~DimD-------g------~fvp------~---------~~~g~~~v~~l~~~~ 62 (277)
++...+...+.++.+.+.+.|...+=+.+-- | .|-| . +..-.+.++++|+.+
T Consensus 145 ~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~ 224 (425)
T 3vcn_A 145 HANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVL 224 (425)
T ss_dssp EEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHc
Confidence 4444567778888888888899999888742 0 0111 1 334578899999876
Q ss_pred -CCCeeeeeeecc-CcHH---hHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcC
Q psy11600 63 -PKAFFETHMMVQ-NPQQ---WIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADAN 130 (277)
Q Consensus 63 -~~~~~d~Hlmv~-~p~~---~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g 130 (277)
++.++-+..--. ++.+ .++.+.+.|++|+. ++.. .....++++|+.+..|+-. +.++.+.+..-.
T Consensus 225 G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE---qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 301 (425)
T 3vcn_A 225 GWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLE---DSVPAENQAGFRLIRQHTTTPLAVGEIFAHVWDAKQLIEEQL 301 (425)
T ss_dssp CSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE---CCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE---CCCChhhHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCC
Confidence 455444332211 2333 46777788999983 2221 1344578888888776632 666555555556
Q ss_pred CCeEEeecC
Q psy11600 131 VDQYTFHVE 139 (277)
Q Consensus 131 ~d~it~H~E 139 (277)
+|.|.+-+-
T Consensus 302 ~d~v~~k~~ 310 (425)
T 3vcn_A 302 IDYLRATVL 310 (425)
T ss_dssp CSEECCCTT
T ss_pred CCeEecChh
Confidence 899988765
No 336
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=72.99 E-value=22 Score=31.64 Aligned_cols=128 Identities=15% Similarity=0.164 Sum_probs=93.7
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeee-----------------ee
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETH-----------------MM 72 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~H-----------------lm 72 (277)
|=.+..|-..-.+.+.+..+.|..++=+|--.=+|=.|+...-++++..++. ++.+++= -.
T Consensus 76 PValHlDHg~~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~--gvsVEaElG~vgg~ed~~~~~~~~~~ 153 (286)
T 1gvf_A 76 PLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQ--DCSVEAELGRLGGVEDDMSVDAESAF 153 (286)
T ss_dssp CBEEEEEEECCHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHT--TCEEEEEESCCC-----------CCS
T ss_pred cEEEEcCCCCCHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHc--CCEEEEEEeeccCcccCccccccccc
Confidence 4445566664456777777889999888877777777888888888877763 3333221 23
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeec
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~ 138 (277)
..+|++-.+.+.+.|+|++.+=+-..-| -++.++.|++....|+-+ |++-+...+++|+.-|-+..
T Consensus 154 ~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~T 233 (286)
T 1gvf_A 154 LTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVAT 233 (286)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTTEEEEEECH
T ss_pred CCCHHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHCCCeEEEECh
Confidence 4688888887888999999766554433 689999999998765532 99999999999999888865
Q ss_pred C
Q psy11600 139 E 139 (277)
Q Consensus 139 E 139 (277)
|
T Consensus 234 d 234 (286)
T 1gvf_A 234 E 234 (286)
T ss_dssp H
T ss_pred H
Confidence 4
No 337
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=72.74 E-value=6.2 Score=36.40 Aligned_cols=76 Identities=12% Similarity=0.089 Sum_probs=53.5
Q ss_pred CCCCeeeeeeeccCcHH-hHHHHHhcCCCeEEEeccCC----------CC-C-HHHHHHHHhhCCCcccc-------hhh
Q psy11600 62 IPKAFFETHMMVQNPQQ-WIEPMADANVDQYTFHVEPV----------DN-V-PQVIRQIKEAGMKVGQV-------LQD 121 (277)
Q Consensus 62 ~~~~~~d~Hlmv~~p~~-~i~~l~~ag~d~i~~H~e~~----------d~-g-~~~i~~i~~~~~~~~d~-------p~~ 121 (277)
.|+.++-+-+-...+.+ ..+.....|+|.+.+|+... ++ + .+.|+++|+.+..|+-+ ..+
T Consensus 142 ~P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e 221 (365)
T 3sr7_A 142 RPHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVK 221 (365)
T ss_dssp ---CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHH
T ss_pred CCCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHH
Confidence 48888888887766665 45556688999999998753 11 1 26789999887766533 345
Q ss_pred hhHHHHhcCCCeEEee
Q psy11600 122 WIEPMADANVDQYTFH 137 (277)
Q Consensus 122 ~i~~~~~~g~d~it~H 137 (277)
-+..+.++|||.|+++
T Consensus 222 ~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 222 TIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHTCCEEECC
T ss_pred HHHHHHHcCCCEEEEe
Confidence 6788899999999985
No 338
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=72.62 E-value=48 Score=28.81 Aligned_cols=99 Identities=11% Similarity=0.053 Sum_probs=53.7
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccc-cccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc--CCCeEE
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGT-FVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA--NVDQYT 92 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~-fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a--g~d~i~ 92 (277)
|.....+..+++.+.|+|. +||-=|. .++.--.=.+++..++.. +++|+.+.- .+|+- ++...++ |+++|
T Consensus 23 ~~~~a~~~a~~~v~~GAdi--IDIg~g~~~v~~~ee~~rvv~~i~~~-~~~pisIDT--~~~~v-~~aAl~a~~Ga~iI- 95 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARA--LDLNVGPAVQDKVSAMEWLVEVTQEV-SNLTLCLDS--TNIKA-IEAGLKKCKNRAMI- 95 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSE--EEEBCC----CHHHHHHHHHHHHHTT-CCSEEEEEC--SCHHH-HHHHHHHCSSCEEE-
T ss_pred CHHHHHHHHHHHHHCCCcE--EEECCCCCCCChHHHHHHHHHHHHHh-CCCeEEEeC--CCHHH-HHHHHhhCCCCCEE-
Confidence 4444445556667789998 6665321 111100112445555553 566766543 35554 4444555 99887
Q ss_pred EeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeec
Q psy11600 93 FHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 93 ~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~ 138 (277)
-++.- +.+- .+..++..+++|+.+|.+|.
T Consensus 96 --Ndvs~-~~d~--------------~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 96 --NSTNA-EREK--------------VEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp --EEECS-CHHH--------------HHHHHHHHHHTTCEEEEESC
T ss_pred --EECCC-Cccc--------------HHHHHHHHHHhCCcEEEEcC
Confidence 22221 1110 11456677899999999998
No 339
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=72.58 E-value=32 Score=30.71 Aligned_cols=39 Identities=8% Similarity=-0.136 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCCCeeeeeeec--cCcHHhHHHHHhcCCCeEEE
Q psy11600 52 HPVVKCLRNKIPKAFFETHMMV--QNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 52 ~~~v~~l~~~~~~~~~d~Hlmv--~~p~~~i~~l~~ag~d~i~~ 93 (277)
.+.++++|+ .++|+-+-. + ....+..+.+.++|+|.|++
T Consensus 171 ~~~i~~vr~--~~~Pv~vK~-v~~g~~~e~a~~~~~~G~d~I~v 211 (332)
T 1vcf_A 171 VERLAELLP--LPFPVMVKE-VGHGLSREAALALRDLPLAAVDV 211 (332)
T ss_dssp HHHHHHHCS--CSSCEEEEC-SSSCCCHHHHHHHTTSCCSEEEC
T ss_pred HHHHHHHHc--CCCCEEEEe-cCCCCCHHHHHHHHHcCCCEEEe
Confidence 578899987 477776642 3 02334577889999999977
No 340
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=72.49 E-value=53 Score=29.27 Aligned_cols=59 Identities=8% Similarity=-0.019 Sum_probs=30.7
Q ss_pred cHHhHHHHHhcCCCeEEEeccCC--CC---CHHHHHHHH---hhCCCcccc---hhhhhHHHHh--cCCCeE
Q psy11600 76 PQQWIEPMADANVDQYTFHVEPV--DN---VPQVIRQIK---EAGMKVGQV---LQDWIEPMAD--ANVDQY 134 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~H~e~~--d~---g~~~i~~i~---~~~~~~~d~---p~~~i~~~~~--~g~d~i 134 (277)
..+..+++.+.|||+|-+-.... +. -.++++.++ +.+..|+.+ -...++.-.+ +|+++|
T Consensus 39 a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~iI 110 (300)
T 3k13_A 39 ALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKSIV 110 (300)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCCEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCCEE
Confidence 34457777889999995544321 11 223444443 333444433 2344444455 577765
No 341
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=71.93 E-value=42 Score=27.93 Aligned_cols=85 Identities=6% Similarity=0.018 Sum_probs=50.1
Q ss_pred ceEeeecccc-CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeee---c--cCc---
Q psy11600 6 CMIGPSILNS-DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMM---V--QNP--- 76 (277)
Q Consensus 6 ~~~~~s~~~~-d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlm---v--~~p--- 76 (277)
.+++-|..+. ....+.+.++.+.+.|.+.+ ++.-..+- ....+.++++.+. .++.+..+-. . .++
T Consensus 5 ~~lg~~~~~~~~~~~~~~~l~~~~~~G~~~v--El~~~~~~---~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~d~~~r 78 (275)
T 3qc0_A 5 EGLSINLATIREQCGFAEAVDICLKHGITAI--APWRDQVA---AIGLGEAGRIVRA-NGLKLTGLCRGGFFPAPDASGR 78 (275)
T ss_dssp TTEEEEGGGGTTTCCHHHHHHHHHHTTCCEE--ECBHHHHH---HHCHHHHHHHHHH-HTCEESCEEEEECCCCSSHHHH
T ss_pred ccceeeeeeccCCCCHHHHHHHHHHcCCCEE--Eecccccc---ccCHHHHHHHHHH-cCCceEEeecCCCcCCCCHHHH
Confidence 3577777777 66799999999999999994 44322111 1233444444333 3565554332 1 122
Q ss_pred -------HHhHHHHHhcCCCeEEEecc
Q psy11600 77 -------QQWIEPMADANVDQYTFHVE 96 (277)
Q Consensus 77 -------~~~i~~l~~ag~d~i~~H~e 96 (277)
.+.++...+.|++++.+|.-
T Consensus 79 ~~~~~~~~~~i~~a~~lG~~~v~~~~g 105 (275)
T 3qc0_A 79 EKAIDDNRRAVDEAAELGADCLVLVAG 105 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEECB
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeC
Confidence 23455556678888888853
No 342
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=71.92 E-value=16 Score=33.46 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=53.5
Q ss_pred eEeeeccccCcccHHHHHHHHH---HcCCCEEEEeccccccccCC----CC--CH----HHHHHHHhcCCCCeeeeeeec
Q psy11600 7 MIGPSILNSDLSNLHSESQNLL---DSGADYLHLDVMDGTFVPNL----TF--GH----PVVKCLRNKIPKAFFETHMMV 73 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~---~~~~~~~h~DimDg~fvp~~----~~--g~----~~v~~l~~~~~~~~~d~Hlmv 73 (277)
-+..||...+...+.+..++++ +.|+|++=+.+ .+||. .+ .+ ++++++|+. +++|+.+=+-.
T Consensus 128 pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNi----sCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p 202 (354)
T 4ef8_A 128 PLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNL----SCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPP 202 (354)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEEC----SSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECC
T ss_pred cEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeC----CCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecC
Confidence 4778898888888888888888 56788844443 24443 12 23 467778876 67787765544
Q ss_pred c-CcH---HhHHHHHhcC-CCeEEE
Q psy11600 74 Q-NPQ---QWIEPMADAN-VDQYTF 93 (277)
Q Consensus 74 ~-~p~---~~i~~l~~ag-~d~i~~ 93 (277)
. +.. +.++.+.++| +|.|++
T Consensus 203 ~~d~~~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 203 YFDFAHFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp CCSHHHHHHHHHHHHTCTTEEEEEE
T ss_pred CCCHHHHHHHHHHHHhCCCccEEEE
Confidence 2 222 2345555787 998875
No 343
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=71.91 E-value=8.1 Score=37.62 Aligned_cols=65 Identities=20% Similarity=0.259 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcH--HhHHHHHhcCCCeEEE
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQ--QWIEPMADANVDQYTF 93 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~--~~i~~l~~ag~d~i~~ 93 (277)
.+-++.|.++|+|.+=+|.-.|+-. .-.+.++.+|+.||++++- +.|-. +..+.|.++|+|.+-+
T Consensus 283 ~eR~~aLv~AGvD~iviD~ahGhs~----~v~~~i~~ik~~~p~~~vi----aGNVaT~e~a~~Li~aGAD~vkV 349 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDSSQGNSV----YQIEFIKWIKQTYPKIDVI----AGNVVTREQAAQLIAAGADGLRI 349 (556)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCCSH----HHHHHHHHHHHHCTTSEEE----EEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhcCCcEEEEeccccccH----HHHHHHHHHHhhCCcceEE----eccccCHHHHHHHHHcCCCEEee
Confidence 4566778889999999999998754 2257899999998876654 44422 3467788999999843
No 344
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=71.71 E-value=39 Score=30.13 Aligned_cols=118 Identities=13% Similarity=0.052 Sum_probs=71.0
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCC-------C-HHHHHHHH---hcC--CCCeeeeeeecc---CcHH-
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTF-------G-HPVVKCLR---NKI--PKAFFETHMMVQ---NPQQ- 78 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~-------g-~~~v~~l~---~~~--~~~~~d~Hlmv~---~p~~- 78 (277)
+..+..+.++++++.|+..+| |-|+.+.+.-+. . .+.++.|| +.- +++.+-+=-=.. ..++
T Consensus 96 ~~~~v~~~v~~l~~aGaagv~--iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldea 173 (298)
T 3eoo_A 96 GAFNIARTIRSFIKAGVGAVH--LEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAA 173 (298)
T ss_dssp SHHHHHHHHHHHHHTTCSEEE--EECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEE--ECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHH
Confidence 455667788899999999977 567665332111 1 23455553 221 333332221111 1222
Q ss_pred --hHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc--------hhhhhHHHHhcCCCeEEeec
Q psy11600 79 --WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV--------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 79 --~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~--------p~~~i~~~~~~g~d~it~H~ 138 (277)
-.+.+.++|||.+.+|. .. .++.++.+.+....|+.+ |.--.++|.+.|+..|++..
T Consensus 174 i~Ra~ay~~AGAD~if~~~--~~-~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~ 240 (298)
T 3eoo_A 174 IERAIAYVEAGADMIFPEA--MK-TLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANVDIALYCC 240 (298)
T ss_dssp HHHHHHHHHTTCSEEEECC--CC-SHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECS
T ss_pred HHHHHhhHhcCCCEEEeCC--CC-CHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEch
Confidence 25567889999996653 22 467777777765555522 44457999999999999975
No 345
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=71.38 E-value=8 Score=35.36 Aligned_cols=84 Identities=21% Similarity=0.292 Sum_probs=48.4
Q ss_pred CCceEeeeccc----cCcccHHHHHHHHHHcCCCEEEEeccccccccC------CCCCHHHHHHHHhcCCCCeeeeeeec
Q psy11600 4 VQCMIGPSILN----SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPN------LTFGHPVVKCLRNKIPKAFFETHMMV 73 (277)
Q Consensus 4 ~~~~~~~s~~~----~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~------~~~g~~~v~~l~~~~~~~~~d~Hlmv 73 (277)
+.++|+|.=+. .+..+..+-++.|++.|+|++|+-- |.+.+. -.+..+.++.+|+. .++|+-+-=-+
T Consensus 228 V~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~--g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~GgI 304 (363)
T 3l5l_A 228 LTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV--GFTIPDTNIPWGPAFMGPIAERVRRE-AKLPVTSAWGF 304 (363)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE--CCCSSCCCCCCCTTTTHHHHHHHHHH-HTCCEEECSST
T ss_pred EEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec--CccccccccCCCcchhHHHHHHHHHH-cCCcEEEeCCC
Confidence 44567775221 1222334456778999999977653 332221 12445788899986 46666543333
Q ss_pred cCcHHhHHHHHhcC-CCeE
Q psy11600 74 QNPQQWIEPMADAN-VDQY 91 (277)
Q Consensus 74 ~~p~~~i~~l~~ag-~d~i 91 (277)
.+++. ++.+.+.| +|.|
T Consensus 305 ~s~e~-a~~~l~~G~aD~V 322 (363)
T 3l5l_A 305 GTPQL-AEAALQANQLDLV 322 (363)
T ss_dssp TSHHH-HHHHHHTTSCSEE
T ss_pred CCHHH-HHHHHHCCCccEE
Confidence 34554 44555566 9988
No 346
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=71.18 E-value=26 Score=26.58 Aligned_cols=84 Identities=8% Similarity=0.077 Sum_probs=53.2
Q ss_pred eeeeeeccCcHHhHHHHHhc--CCCeEEEeccCCCC-CHHHHHHHHhhCCC-cccc-----hhhhhHHHHhcCCCeEEee
Q psy11600 67 FETHMMVQNPQQWIEPMADA--NVDQYTFHVEPVDN-VPQVIRQIKEAGMK-VGQV-----LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~a--g~d~i~~H~e~~d~-g~~~i~~i~~~~~~-~~d~-----p~~~i~~~~~~g~d~it~H 137 (277)
+.+.-.+.+..+.++.+.+. ..|.+.+.++..+. |.++++.+|+.... ++-+ ....+....++|++.+-.-
T Consensus 61 ~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~K 140 (157)
T 3hzh_A 61 FNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVK 140 (157)
T ss_dssp CEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEES
T ss_pred CeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeC
Confidence 34433566777777777776 67888666654332 78888888886532 3222 3556677788898866555
Q ss_pred cCCCCChHHHHHHHHH
Q psy11600 138 VEPVDNVPQVIRQIKE 153 (277)
Q Consensus 138 ~E~~~~~~~~~~~I~~ 153 (277)
.- +...+.+.+++
T Consensus 141 P~---~~~~l~~~i~~ 153 (157)
T 3hzh_A 141 PL---DRAKVLQRVMS 153 (157)
T ss_dssp SC---CHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHH
Confidence 44 45666666664
No 347
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=70.53 E-value=59 Score=29.07 Aligned_cols=113 Identities=11% Similarity=0.172 Sum_probs=65.6
Q ss_pred cCcHHhHHHHHhcCCCeEEEeccCCCCC---------HHHHHHHHhhCCCcccc-----h---hhhhHHHHhcCCC---e
Q psy11600 74 QNPQQWIEPMADANVDQYTFHVEPVDNV---------PQVIRQIKEAGMKVGQV-----L---QDWIEPMADANVD---Q 133 (277)
Q Consensus 74 ~~p~~~i~~l~~ag~d~i~~H~e~~d~g---------~~~i~~i~~~~~~~~d~-----p---~~~i~~~~~~g~d---~ 133 (277)
.++.++...+.+.|||+|-+..+..+-+ .++|+.+++....|+.+ | .+.++.-.++|++ +
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~i 153 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCL 153 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCE
Confidence 4667777778899999998887754322 56888888876554433 2 3355666777887 4
Q ss_pred E-EeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHH---HhhcCce-EEEEecCCCC
Q psy11600 134 Y-TFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEY---IESADLV-LIMTVEPGFG 191 (277)
Q Consensus 134 i-t~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~---i~~~d~v-l~mav~Pgt~ 191 (277)
| ++-.+ ..+.+...+++.| +.+.+.+-..++.+.+. +.+.++- -=+.++||++
T Consensus 154 INdvs~~---~~~~~~~~aa~~g--~~vv~m~~~dv~~l~~~~~~a~~~Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 154 LSSATKD---NYKPIVATCMVHG--HSVVASAPLDINLSKQLNIMIMEMNLAPNRIIMDPLIG 211 (310)
T ss_dssp EEEECTT---THHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred EEECCCC---ccHHHHHHHHHhC--CCEEEEChhHHHHHHHHHHHHHHCCCChhhEEEeCCCc
Confidence 3 55544 5566777777765 33333332224333333 3344431 0123588875
No 348
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=70.37 E-value=33 Score=30.11 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=65.6
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCC--CCHHHHHHHHhhCCCcc--cc--hhhhhHHHHhcCCCeEEeecCCCCChHHHH
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVD--NVPQVIRQIKEAGMKVG--QV--LQDWIEPMADANVDQYTFHVEPVDNVPQVI 148 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d--~g~~~i~~i~~~~~~~~--d~--p~~~i~~~~~~g~d~it~H~E~~~~~~~~~ 148 (277)
||-+......++| |.||+|.---- --..-++.+|+....++ .+ -+++++...+..++.+|+=+| ...++-
T Consensus 26 dpv~aA~~ae~aG-dgITvHlReDrRHI~d~Dv~~L~~~~~~~lNlE~a~t~emi~ial~~kP~~vtLVPE---kreE~T 101 (260)
T 3o6c_A 26 DLLEAAFIVARHG-DQITLHVREDRRHAQDFDLENIIKFCKSPVNLECALNDEILNLALKLKPHRVTLVPE---KREELT 101 (260)
T ss_dssp CHHHHHHHHHHHS-SEEEEECCTTCSSSCHHHHHHHHHHCSSCEEEEECSCHHHHHHHHHHCCSEEEECCC---SGGGBC
T ss_pred CHHHHHHHHHHhC-CeEEEeeCCCcccCCHHHHHHHHHHcCCCEEeecCCCHHHHHHHHHcCCCEEEECCC---CCCccC
Confidence 6777777788999 99999976421 14566888888765554 33 467888889999999999887 332110
Q ss_pred HHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCC
Q psy11600 149 RQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPG 189 (277)
Q Consensus 149 ~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pg 189 (277)
.+ -|+-+ -...+..+...++..++..-+.++|.
T Consensus 102 ---Te----gGldv-~~~~L~~~i~~L~~~GIrVSLFIDpd 134 (260)
T 3o6c_A 102 ---TE----GGLCL-NHAKLKQSIEKLQNANIEVSLFINPS 134 (260)
T ss_dssp ---TT----SSBCT-TCTTHHHHHHHHHHTTCEEEEEECSC
T ss_pred ---CC----CChhh-CHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 00 12222 12233444455666777777777775
No 349
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=70.35 E-value=30 Score=30.87 Aligned_cols=94 Identities=13% Similarity=0.153 Sum_probs=53.4
Q ss_pred HHHHHHHHHHcCCCEEEEeccccccccC---CCCC------HHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCe
Q psy11600 20 LHSESQNLLDSGADYLHLDVMDGTFVPN---LTFG------HPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQ 90 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~DimDg~fvp~---~~~g------~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~ 90 (277)
..+..+++.+.|+|. +||-=-..-|+ ++-. .++|+.+++. .++|+.++-+ +|+ .++...++|+++
T Consensus 65 a~~~a~~~v~~GAdi--IDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~-~~vpiSIDT~--~~~-V~~aAl~aGa~i 138 (297)
T 1tx2_A 65 AVRHAKEMRDEGAHI--IDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKE-VKLPISIDTY--KAE-VAKQAIEAGAHI 138 (297)
T ss_dssp HHHHHHHHHHTTCSE--EEEESCC----CCCCCHHHHHHHHHHHHHHHHHH-SCSCEEEECS--CHH-HHHHHHHHTCCE
T ss_pred HHHHHHHHHHcCCCE--EEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhc-CCceEEEeCC--CHH-HHHHHHHcCCCE
Confidence 334455667789999 77762111122 1111 2344666764 4778777644 554 355566679998
Q ss_pred EEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeec
Q psy11600 91 YTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 91 i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~ 138 (277)
| -++-....- ...++..+++|+.+|.+|.
T Consensus 139 I-Ndvsg~~~d------------------~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 139 I-NDIWGAKAE------------------PKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp E-EETTTTSSC------------------THHHHHHHHHTCCEEEECC
T ss_pred E-EECCCCCCC------------------HHHHHHHHHhCCcEEEEeC
Confidence 8 122211101 2345667889999999996
No 350
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=70.22 E-value=21 Score=32.40 Aligned_cols=143 Identities=13% Similarity=0.124 Sum_probs=85.6
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHhcCCCe
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMADANVDQ 90 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ag~d~ 90 (277)
+...+.++.+++.+.|.+.+=+.+-. +++.+..+.++++|+.+ +++++-+..--. ++. ++++.+.+.|++|
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~----~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~ 221 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGR----PDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHW 221 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC----SSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCC----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCE
Confidence 56667778888888898885554432 23445668899999876 454443332111 233 3566777889999
Q ss_pred EEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChHH---HHHHHHHhCCccce
Q psy11600 91 YTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVPQ---VIRQIKEAGMKVGL 160 (277)
Q Consensus 91 i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~~---~~~~I~~~g~~~g~ 160 (277)
+- +... ......+.+++.+..|+-. +.++.+.+..-.+|.+.+-+--.+.+.. +.+..++. |+
T Consensus 222 iE---qP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~----gi 294 (371)
T 2ovl_A 222 IE---EPTIPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEAN----NM 294 (371)
T ss_dssp EE---CCSCTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHT----TC
T ss_pred EE---CCCCcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHc----CC
Confidence 83 2221 2466778888877665522 6666666666679999887652222333 33334444 45
Q ss_pred eeCCCCCHH
Q psy11600 161 AIKPKTPVD 169 (277)
Q Consensus 161 ~i~p~t~~~ 169 (277)
.+.++...+
T Consensus 295 ~~~~h~~~~ 303 (371)
T 2ovl_A 295 LLTSHGVHD 303 (371)
T ss_dssp CEEECSCHH
T ss_pred eEccccHHH
Confidence 555565543
No 351
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=69.93 E-value=15 Score=33.12 Aligned_cols=84 Identities=12% Similarity=0.147 Sum_probs=49.8
Q ss_pred CCceEeeecc---ccCcccHHHHHHHHHHcCCCEEEEeccccccc----cC-CCCCHHHHHHHHhcCCCCeeeeeeeccC
Q psy11600 4 VQCMIGPSIL---NSDLSNLHSESQNLLDSGADYLHLDVMDGTFV----PN-LTFGHPVVKCLRNKIPKAFFETHMMVQN 75 (277)
Q Consensus 4 ~~~~~~~s~~---~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fv----p~-~~~g~~~v~~l~~~~~~~~~d~Hlmv~~ 75 (277)
+.++|+|.=. ..+..+..+-.+.|++.|+|++|+- +|.+. |. -.+..+.++.+|+. .++|+-+-=-+.+
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~--~~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~s 288 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCS--SGALVHADINVFPGYQVSFAEKIREQ-ADMATGAVGMITD 288 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE--CCCSSCCCCCCCTTTTHHHHHHHHHH-HCCEEEECSSCCS
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEe--cCccccCCCCCCccchHHHHHHHHHH-CCCCEEEECCCCC
Confidence 3456776422 1123344566778899999997763 43321 11 12456889999986 5677655444445
Q ss_pred cHHhHHHHHhcC-CCeE
Q psy11600 76 PQQWIEPMADAN-VDQY 91 (277)
Q Consensus 76 p~~~i~~l~~ag-~d~i 91 (277)
++.. +.+.+.| +|.+
T Consensus 289 ~~~a-~~~l~~G~aD~V 304 (338)
T 1z41_A 289 GSMA-EEILQNGRADLI 304 (338)
T ss_dssp HHHH-HHHHHTTSCSEE
T ss_pred HHHH-HHHHHcCCceEE
Confidence 6554 4555566 9988
No 352
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=69.71 E-value=41 Score=29.68 Aligned_cols=94 Identities=15% Similarity=0.276 Sum_probs=56.2
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCC---CC------CHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCC
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNL---TF------GHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVD 89 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~---~~------g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d 89 (277)
..-+..+++.+.|+|. +||-=-..-|.- +- =.++++.+++. .++++.++- .+|+ .++...++|++
T Consensus 39 ~a~~~a~~~v~~GAdi--IDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~-~~~piSIDT--~~~~-va~aAl~aGa~ 112 (282)
T 1aj0_A 39 DAVKHANLMINAGATI--IDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQR-FEVWISVDT--SKPE-VIRESAKVGAH 112 (282)
T ss_dssp HHHHHHHHHHHHTCSE--EEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHH-CCCEEEEEC--CCHH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCCE--EEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhh-cCCeEEEeC--CCHH-HHHHHHHcCCC
Confidence 3344455566779999 888641222321 10 13567777765 477777653 3444 46666778999
Q ss_pred eEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeec
Q psy11600 90 QYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 90 ~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~ 138 (277)
+|- ++-... -...++..+++|+.+|.+|.
T Consensus 113 iIN-dvsg~~-------------------d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 113 IIN-DIRSLS-------------------EPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp EEE-ETTTTC-------------------STTHHHHHHHHTCCEEEECC
T ss_pred EEE-ECCCCC-------------------CHHHHHHHHHhCCeEEEEcc
Confidence 882 222110 12346677889999999997
No 353
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=69.65 E-value=59 Score=29.63 Aligned_cols=148 Identities=7% Similarity=0.006 Sum_probs=87.5
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEecc-ccccccCC-CCCHHHHHHHHhcC-CCCeeeeeeecc---CcHH---hHHHHHh
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVM-DGTFVPNL-TFGHPVVKCLRNKI-PKAFFETHMMVQ---NPQQ---WIEPMAD 85 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~Dim-Dg~fvp~~-~~g~~~v~~l~~~~-~~~~~d~Hlmv~---~p~~---~i~~l~~ 85 (277)
.|...+.++.+++.+.|.+.+=+... =|. ++ .+..+.++++|+.+ +++++-+..--. ++.+ +++.+.+
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~spvG~---~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~ 220 (401)
T 2hzg_A 144 DTPQETLERARAARRDGFAAVKFGWGPIGR---GTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDA 220 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEESTTTTS---SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEcCCCCCC---CHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHh
Confidence 46666777888888889998665510 022 34 45668899999876 454443332211 3333 5777888
Q ss_pred cCCCeEEEeccCC-CCCHHHHHHHHh-hCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHh
Q psy11600 86 ANVDQYTFHVEPV-DNVPQVIRQIKE-AGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEA 154 (277)
Q Consensus 86 ag~d~i~~H~e~~-d~g~~~i~~i~~-~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~ 154 (277)
.|++|+- +.. .......+.+++ .+..|+-. +.++.+.+.+-.+|.+.+-+--.+.+. ++.+..++.
T Consensus 221 ~~i~~iE---qP~~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 297 (401)
T 2hzg_A 221 AGVLWLE---EPFDAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQAR 297 (401)
T ss_dssp TTCSEEE---CCSCTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHH
T ss_pred cCCCEEE---CCCCccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHc
Confidence 9999983 222 124567788887 66555522 666555556666999988442101222 344555566
Q ss_pred CCccceeeCCCCCHH
Q psy11600 155 GMKVGLAIKPKTPVD 169 (277)
Q Consensus 155 g~~~g~~i~p~t~~~ 169 (277)
|+..-.+ ..++++.
T Consensus 298 g~~~~~h-~~es~i~ 311 (401)
T 2hzg_A 298 GITYVNH-TFTSHLA 311 (401)
T ss_dssp TCEEEEC-CCSCHHH
T ss_pred CCEEecC-CCCcHHH
Confidence 6665555 5555553
No 354
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=69.44 E-value=29 Score=25.03 Aligned_cols=83 Identities=13% Similarity=0.047 Sum_probs=52.1
Q ss_pred eeeeeeccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhC---CCcccc-----hhhhhHHHHhcCCCeEEee
Q psy11600 67 FETHMMVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAG---MKVGQV-----LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~---~~~~d~-----p~~~i~~~~~~g~d~it~H 137 (277)
+.+. .+.+..+.++.+.+...|.+.+.+...+ .|.++++.+|+.. ..|+-+ .........++|++.+-.-
T Consensus 27 ~~v~-~~~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~K 105 (122)
T 3gl9_A 27 YEVI-EAENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRK 105 (122)
T ss_dssp CEEE-EESSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEES
T ss_pred cEEE-EeCCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccC
Confidence 3454 4567777787777777888866655433 2788899988753 223322 2445566678888766554
Q ss_pred cCCCCChHHHHHHHHH
Q psy11600 138 VEPVDNVPQVIRQIKE 153 (277)
Q Consensus 138 ~E~~~~~~~~~~~I~~ 153 (277)
+- +...+.+.+++
T Consensus 106 P~---~~~~L~~~i~~ 118 (122)
T 3gl9_A 106 PF---SPSQFIEEVKH 118 (122)
T ss_dssp SC---CHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHH
Confidence 44 55666666654
No 355
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=69.32 E-value=40 Score=29.84 Aligned_cols=126 Identities=17% Similarity=0.240 Sum_probs=67.6
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHH-HHHHHhcCCCC--eeeeee------eccCcHHh---HHHHHhc
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPV-VKCLRNKIPKA--FFETHM------MVQNPQQW---IEPMADA 86 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~-v~~l~~~~~~~--~~d~Hl------mv~~p~~~---i~~l~~a 86 (277)
.+.+.++.+++.|.++ +-|.||..- +..+. .+.+++.-+.+ ..++.- ...+|.++ ++...+|
T Consensus 111 ~~~~yl~~~k~lGF~~--IEISdGti~----l~~~~~~~lI~~a~~~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeA 184 (276)
T 1u83_A 111 KVNEFHRYCTYFGCEY--IEISNGTLP----MTNKEKAAYIADFSDEFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEA 184 (276)
T ss_dssp CHHHHHHHHHHTTCSE--EEECCSSSC----CCHHHHHHHHHHHTTTSEEEEECSCCC------CCSTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCE--EEECCCccc----CCHHHHHHHHHHHHhhcEEeeeccccCccccCCCCHHHHHHHHHHHHHC
Confidence 7889999999999999 999998653 55543 33444432232 122211 22345555 5556789
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhh-HHH-HhcCCCeEEeecCCCCChHHHHHHHHHhCCcccee
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWI-EPM-ADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGLA 161 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i-~~~-~~~g~d~it~H~E~~~~~~~~~~~I~~~g~~~g~~ 161 (277)
||++| =+|+-..|..- + +.....+-.+.+ +.+ ...+.+.+.|-+- .......+|+..|-.+.+|
T Consensus 185 GA~~V--iiEaRESG~~G---i---~~~~g~~r~d~v~~~i~~~l~~eklifEAp---~k~qq~~fI~~fGp~VNLg 250 (276)
T 1u83_A 185 GAEKV--ITEARESGTGG---I---CSSSGDVRFQIVDDIISSDIDINRLIFEAP---NKTLQQGFIQKIGPNVNLA 250 (276)
T ss_dssp TEEEE--EEC------------------------CCHHHHHTTTSCGGGEEEECC---SHHHHHHHHHHHCTTCCEE
T ss_pred CCcEE--EEeeeccCCCC---c---cCCCCCCcHHHHHHHHHhhCChhhEEEECC---CHHHHHHHHHHhCCCcccc
Confidence 99999 45552211000 0 000111112233 222 3347888888765 5556667888887665554
No 356
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=68.40 E-value=3 Score=37.23 Aligned_cols=70 Identities=14% Similarity=0.179 Sum_probs=42.7
Q ss_pred hhHHHHHhhCCC-ccEEEeCCCCcCcHHH---HHHccCCC-CCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHh
Q psy11600 201 PKVKWLRENYPT-LNIEVDGGVGPNTIDE---CAKCLTGF-GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDEC 275 (277)
Q Consensus 201 ~kI~~l~~~~~~-~~i~vdGgV~~~tv~~---~~~~gpg~-ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~ 275 (277)
.-++.++++.+. ..+.+ ...|.++ ..++|+++ +-..|.++.++++.+.. .++..+++=||||++|++.+
T Consensus 184 ~av~~ar~~~~~~~~IgV----ev~t~eea~eA~~aGaD~I~ld~~~~~~~k~av~~v--~~~ipi~AsGGIt~eni~~~ 257 (286)
T 1x1o_A 184 EAVRRAKARAPHYLKVEV----EVRSLEELEEALEAGADLILLDNFPLEALREAVRRV--GGRVPLEASGNMTLERAKAA 257 (286)
T ss_dssp HHHHHHHHHSCTTSCEEE----EESSHHHHHHHHHHTCSEEEEESCCHHHHHHHHHHH--TTSSCEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEE----EeCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh--CCCCeEEEEcCCCHHHHHHH
Confidence 346667776654 44554 3455555 45678886 33445554444333222 23578999999999999887
Q ss_pred h
Q psy11600 276 A 276 (277)
Q Consensus 276 ~ 276 (277)
+
T Consensus 258 a 258 (286)
T 1x1o_A 258 A 258 (286)
T ss_dssp H
T ss_pred H
Confidence 5
No 357
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=68.31 E-value=46 Score=27.57 Aligned_cols=75 Identities=17% Similarity=0.227 Sum_probs=46.4
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHH-HHHHHHhcCCCCeeeeeeecc-------Cc----------
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHP-VVKCLRNKIPKAFFETHMMVQ-------NP---------- 76 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~-~v~~l~~~~~~~~~d~Hlmv~-------~p---------- 76 (277)
+...++.+.++.+.+.|.+ +-+ ..++ +. +.+. .++++++.+-+ .+.+|.-.. +|
T Consensus 7 ~p~~~l~~~l~~~~~~G~~-vEl-~~~~---~~--~~~~~~~~~~~~~~~~-~~~~h~~~~~~~l~~~~~~~r~~~~~~~ 78 (254)
T 3ayv_A 7 FPLSRAEEALPRLQALGLG-AEV-YLDP---AL--LEEDALFQSLRRRFSG-KLSVHLPFWNLDLLSPDPEVRGLTLRRL 78 (254)
T ss_dssp EEGGGHHHHHHHHHHHTCE-EEE-ECCG---GG--TTCHHHHHHHHHHCCS-CEEEECCCTTCCTTCSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-EEE-eccc---cc--cCcHHHHHHHHHHhCC-CeEEecCccCCCCCCCCHHHHHHHHHHH
Confidence 4456789999999999988 654 2222 12 2222 67777776434 677775321 22
Q ss_pred HHhHHHHHhcCCCeEEEeccC
Q psy11600 77 QQWIEPMADANVDQYTFHVEP 97 (277)
Q Consensus 77 ~~~i~~l~~ag~d~i~~H~e~ 97 (277)
.+.++...+.|+.++.+|.-.
T Consensus 79 ~~~i~~A~~lGa~~v~~~~g~ 99 (254)
T 3ayv_A 79 LFGLDRAAELGADRAVFHSGI 99 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHHHhCCCEEEECCCC
Confidence 223555667799999888543
No 358
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=68.22 E-value=24 Score=32.36 Aligned_cols=121 Identities=12% Similarity=0.206 Sum_probs=73.8
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccc----cc-------------ccc--CCCCCHHHHHHHHhcC-CCCeeeeeeecc-
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMD----GT-------------FVP--NLTFGHPVVKCLRNKI-PKAFFETHMMVQ- 74 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimD----g~-------------fvp--~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~- 74 (277)
+...+.++.+++.+.|.+.+=+.+.. |. +.+ ++.+..+.++++|+.+ +++++-+..--.
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~ 229 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLL 229 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCC
Confidence 55666777788888899997776531 22 111 2344567899999865 454433322111
Q ss_pred CcHH---hHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecC
Q psy11600 75 NPQQ---WIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 75 ~p~~---~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E 139 (277)
++.+ +++.+.+.|++|+- |+.. ......+.+++.+..|+-. +.++-+.+.+-.+|.+.+-+-
T Consensus 230 ~~~~ai~~~~~l~~~~i~~iE---~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 301 (410)
T 2gl5_A 230 GTNSAIQFAKAIEKYRIFLYE---EPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPDLC 301 (410)
T ss_dssp CHHHHHHHHHHHGGGCEEEEE---CSSCSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEECCCTT
T ss_pred CHHHHHHHHHHHHhcCCCeEE---CCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCcc
Confidence 3333 46666777888773 3222 2466788888887666532 565555555556899988764
No 359
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=68.21 E-value=70 Score=29.00 Aligned_cols=83 Identities=11% Similarity=-0.010 Sum_probs=52.7
Q ss_pred CCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE--ecc-CCCCC---HHHHHHHHhhC--CCcccc---
Q psy11600 50 FGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF--HVE-PVDNV---PQVIRQIKEAG--MKVGQV--- 118 (277)
Q Consensus 50 ~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~--H~e-~~d~g---~~~i~~i~~~~--~~~~d~--- 118 (277)
+..+.++++|+. .++|+-+-. +.+ .+.++.+.++|+|.|.+ |.- ..+++ ...++++++.. ..++-.
T Consensus 212 ~~~~~i~~l~~~-~~~pv~vK~-~~~-~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GG 288 (370)
T 1gox_A 212 LSWKDVAWLQTI-TSLPILVKG-VIT-AEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGG 288 (370)
T ss_dssp CCHHHHHHHHHH-CCSCEEEEC-CCS-HHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESS
T ss_pred chHHHHHHHHHH-hCCCEEEEe-cCC-HHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECC
Confidence 455789999987 577777532 333 46788899999999988 532 12332 23455665543 233321
Q ss_pred ---hhhhhHHHHhcCCCeEEe
Q psy11600 119 ---LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 ---p~~~i~~~~~~g~d~it~ 136 (277)
+.+..+.++ +|||.+.+
T Consensus 289 I~~~~D~~k~l~-~GAdaV~i 308 (370)
T 1gox_A 289 VRRGTDVFKALA-LGAAGVFI 308 (370)
T ss_dssp CCSHHHHHHHHH-HTCSEEEE
T ss_pred CCCHHHHHHHHH-cCCCEEee
Confidence 666666665 78888777
No 360
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=68.07 E-value=36 Score=25.53 Aligned_cols=84 Identities=11% Similarity=0.132 Sum_probs=54.3
Q ss_pred eeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCC-cccc-----hhhhhHHHHhcC-CCeEEee
Q psy11600 66 FFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMK-VGQV-----LQDWIEPMADAN-VDQYTFH 137 (277)
Q Consensus 66 ~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~-~~d~-----p~~~i~~~~~~g-~d~it~H 137 (277)
.+.+. .+.+..+.++.+.+...|.+.+.++..+. |..+++.+|+.... ++-+ ...++....++| ++-+-.-
T Consensus 38 g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~K 116 (153)
T 3hv2_A 38 PYTLH-FARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSK 116 (153)
T ss_dssp SCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECS
T ss_pred CcEEE-EECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeC
Confidence 35554 46677888888888888888777665433 88899999886432 3322 345666777888 7655554
Q ss_pred cCCCCChHHHHHHHHH
Q psy11600 138 VEPVDNVPQVIRQIKE 153 (277)
Q Consensus 138 ~E~~~~~~~~~~~I~~ 153 (277)
.- +...+...|+.
T Consensus 117 P~---~~~~l~~~i~~ 129 (153)
T 3hv2_A 117 PW---DDQELLLALRQ 129 (153)
T ss_dssp SC---CHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHH
Confidence 43 45566665554
No 361
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=67.87 E-value=40 Score=35.69 Aligned_cols=41 Identities=24% Similarity=0.551 Sum_probs=27.6
Q ss_pred HHHHHHHhcCCCCeeeeeeeccC-------cH----HhHHHHHhcCCCeEEE
Q psy11600 53 PVVKCLRNKIPKAFFETHMMVQN-------PQ----QWIEPMADANVDQYTF 93 (277)
Q Consensus 53 ~~v~~l~~~~~~~~~d~Hlmv~~-------p~----~~i~~l~~ag~d~i~~ 93 (277)
+.++.+++..|+.++-+.+--.| |. +.++...++|+|.+++
T Consensus 595 e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~~Gvd~iri 646 (1150)
T 3hbl_A 595 ERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHKFVQESAKAGIDVFRI 646 (1150)
T ss_dssp HHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCCeEEEEeccccccccccCCchhHHHHHHHHHhCCcCEEEE
Confidence 67888888778887766553222 22 3477777889998843
No 362
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=67.53 E-value=65 Score=28.39 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=65.5
Q ss_pred HHHHHcCCCEEEEecccccc-----ccC---CCCC--HHHHHHHHhcCCCCeeeeeeec---cCcHHh---HHHHHhcCC
Q psy11600 25 QNLLDSGADYLHLDVMDGTF-----VPN---LTFG--HPVVKCLRNKIPKAFFETHMMV---QNPQQW---IEPMADANV 88 (277)
Q Consensus 25 ~~l~~~~~~~~h~DimDg~f-----vp~---~~~g--~~~v~~l~~~~~~~~~d~Hlmv---~~p~~~---i~~l~~ag~ 88 (277)
+.++++|+|.+- +-|+-- .|+ +|+. ....+++++.-++.++.+++=. .+|++. +.++.++|+
T Consensus 43 ~l~e~aG~d~il--vGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa 120 (275)
T 3vav_A 43 ALLDRANVDVQL--IGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASAVKLMRAGA 120 (275)
T ss_dssp HHHHHTTCSEEE--ECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEE--ECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHHHHHHcCC
Confidence 446788999952 333211 111 2221 2336677776456888888765 466664 456778899
Q ss_pred CeEEEeccCCCCCHHHHHHHHhhCCCcc----cc----------------------hhhhhHHHHhcCCCeEEeec
Q psy11600 89 DQYTFHVEPVDNVPQVIRQIKEAGMKVG----QV----------------------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 89 d~i~~H~e~~d~g~~~i~~i~~~~~~~~----d~----------------------p~~~i~~~~~~g~d~it~H~ 138 (277)
+-+ ++|-...-.+.|+.+++...... .. -.+....+.++||+.+.+-.
T Consensus 121 ~aV--klEdg~~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~ 194 (275)
T 3vav_A 121 QMV--KFEGGEWLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEA 194 (275)
T ss_dssp SEE--EEECCGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CEE--EECCchhHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEecC
Confidence 999 77743334677888877643311 01 12345667788888887753
No 363
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=67.50 E-value=28 Score=31.53 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=74.7
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccc--cccc----cCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCe
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMD--GTFV----PNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQ 90 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimD--g~fv----p~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~ 90 (277)
+.+-++..+.+++.|+|+|=+=|=- |.|- |...+.++.++++++. .++|+..|==.+-|.++++.+++.|.++
T Consensus 152 yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~-~~vpLVlHGgSsvp~~~~~~~~~~gg~~ 230 (323)
T 2isw_A 152 LTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDL-TGIPLVMHGSSSVPKDVKDMINKYGGKM 230 (323)
T ss_dssp CCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHH-HCSCEEECSCCCCCHHHHHHHHHTTCCC
T ss_pred cCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHH-hCCCeEEECCCCCCHHHHHHHHHhcccc
Confidence 4677888888989999998887766 6665 3311555889999987 5899999988899999999999999874
Q ss_pred EEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecC
Q psy11600 91 YTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 91 i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E 139 (277)
. ++. | +|++-+...+++|+.-|-+..|
T Consensus 231 ---~-~~~-G-----------------vp~e~i~~ai~~GV~KiNi~Td 257 (323)
T 2isw_A 231 ---P-DAV-G-----------------VPIESIVHAIGEGVCKINVDSD 257 (323)
T ss_dssp ---T-TCB-C-----------------CCHHHHHHHHHTTEEEEEECHH
T ss_pred ---c-cCC-C-----------------CCHHHHHHHHHCCCeEEEEChH
Confidence 1 221 2 3566677777888877777543
No 364
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=67.21 E-value=14 Score=33.24 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=41.6
Q ss_pred hHHHHHhcCCCeEEEeccC-CCC--------CHHHHHHHHhhCCCcccc---------hhhhhHHHHhcCCCeEEeec
Q psy11600 79 WIEPMADANVDQYTFHVEP-VDN--------VPQVIRQIKEAGMKVGQV---------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 79 ~i~~l~~ag~d~i~~H~e~-~d~--------g~~~i~~i~~~~~~~~d~---------p~~~i~~~~~~g~d~it~H~ 138 (277)
....+.+|||..+|+|+-- .|| --++++.||+.+...+.+ |++.+..+.+..+|+.|+-.
T Consensus 37 ~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~TTgg~~~~~~eerla~~~~~~Pe~aSln~ 114 (311)
T 3e49_A 37 ASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTDAVINLTTGGSPHMTVEERLRPATHYMPELASLNM 114 (311)
T ss_dssp HHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCCCEEEECSCSCTTSCHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEECCCCCCCCCHHHHHHHHHhcCCCeeeecC
Confidence 3445677899999999865 455 335788899887544422 66667766666777777653
No 365
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=67.19 E-value=62 Score=28.03 Aligned_cols=60 Identities=15% Similarity=0.170 Sum_probs=33.1
Q ss_pred cHHhHHHHHhcCCCeEEEeccCC--CC---CHHHHHHHHhhCCCcccc---hhhhhHHHHhc--CCCeEE
Q psy11600 76 PQQWIEPMADANVDQYTFHVEPV--DN---VPQVIRQIKEAGMKVGQV---LQDWIEPMADA--NVDQYT 135 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~H~e~~--d~---g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~--g~d~it 135 (277)
..+..+++.+.|||+|-+-..+. +. -.++++.++..+..|+.+ -.+.++.-.++ |+++|-
T Consensus 27 a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iIN 96 (262)
T 1f6y_A 27 VQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMIN 96 (262)
T ss_dssp HHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEE
Confidence 44567778889999994443211 11 334555555544444433 23344444555 777764
No 366
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=66.98 E-value=30 Score=31.05 Aligned_cols=122 Identities=14% Similarity=0.115 Sum_probs=88.1
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeee-----------------ee
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETH-----------------MM 72 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~H-----------------lm 72 (277)
|=.+..|-..--+.+.+..+.|..++=+|--.-+|=.|+...-++++..++. ++.+++= -.
T Consensus 74 PValHlDHg~~~e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~--gvsVEaELG~vgg~Ed~~~~~~~~~~ 151 (305)
T 1rvg_A 74 PVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAV--GVTVEAELGRLAGIEEHVAVDEKDAL 151 (305)
T ss_dssp CEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHT--TCEEEEEESCCCCSCC------CCTT
T ss_pred cEEEECCCCCCHHHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHc--CCEEEEEEeeccCccCCccccccccc
Confidence 4455566665556777777889999888877777777888888888877753 3333221 13
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCCC----------CHHHHHHHHhhCCCcc------cchhhhhHHHHhcCCCe
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVDN----------VPQVIRQIKEAGMKVG------QVLQDWIEPMADANVDQ 133 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d~----------g~~~i~~i~~~~~~~~------d~p~~~i~~~~~~g~d~ 133 (277)
..+|++-.+.+.+.|+|++.+=+-..-| -++.++.|++....|+ .+|.+|++.+-++|.++
T Consensus 152 yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~ 228 (305)
T 1rvg_A 152 LTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEI 228 (305)
T ss_dssp CCCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCC
T ss_pred cCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhcccc
Confidence 4678888887788999999665443322 5889999999876554 34999999999999876
No 367
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=66.80 E-value=36 Score=34.28 Aligned_cols=73 Identities=21% Similarity=0.340 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCEEEEeccccccccCCCCCH-------HHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEE
Q psy11600 20 LHSESQNLLDSGADYLHLDVMDGTFVPNLTFGH-------PVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYT 92 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~-------~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~ 92 (277)
+.+.++.|.+.|++|+.+| |-.++.++ ++ +.++.+.+...+.++.+|....+.. .++.+.+.++|.+
T Consensus 183 y~~~l~~L~~~Ga~~VQiD--EP~L~~dl--~~~~~~~~~~ay~~l~~~~~~~~v~lhtyfG~~~-~~~~l~~l~vd~l- 256 (755)
T 2nq5_A 183 YKQVFTELVKAGASYIQVD--EPIFVTDE--GKDYLQAAKAVYAYFAKEVPDAKFIFQTYFEGLI-DSQVLSQLPVDAF- 256 (755)
T ss_dssp HHHHHHHHHHTTCCEEEEE--CGGGGSSG--GGGGHHHHHHHHHHHHHHSTTCEEEEECCSSCCT-THHHHTTSSCSEE-
T ss_pred HHHHHHHHHhcCCCEEEEe--CCcccCCC--CHHHHHHHHHHHHHHHhcccCCcEEEEEeCCChH-HHHHHHhCCCCEE-
Confidence 3577888999999997666 32333222 23 3333333211145777787777776 7788889999999
Q ss_pred EeccCCC
Q psy11600 93 FHVEPVD 99 (277)
Q Consensus 93 ~H~e~~d 99 (277)
|+|...
T Consensus 257 -~lD~v~ 262 (755)
T 2nq5_A 257 -GLDFVY 262 (755)
T ss_dssp -EEESSS
T ss_pred -EEEecC
Confidence 777555
No 368
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=66.60 E-value=8.1 Score=35.60 Aligned_cols=75 Identities=19% Similarity=0.259 Sum_probs=54.6
Q ss_pred cccCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCC---CeeeeeeeccCcHHhHHH--HHh
Q psy11600 13 LNSDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPK---AFFETHMMVQNPQQWIEP--MAD 85 (277)
Q Consensus 13 ~~~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~---~~~d~Hlmv~~p~~~i~~--l~~ 85 (277)
-..|+..+.+.++.+.+.|++. +=+-| |...|+-. .+.++.+++.+|+ .++.+|.=-..-...... ..+
T Consensus 152 ~r~~~~~~~~~~~~~~~~Ga~~--i~l~DT~G~~~P~~~--~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~ 227 (370)
T 3rmj_A 152 LRSEIDFLAEICGAVIEAGATT--INIPDTVGYSIPYKT--EEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALK 227 (370)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCE--EEEECSSSCCCHHHH--HHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCCE--EEecCccCCcCHHHH--HHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHH
Confidence 3467777888899999999999 77788 66666532 3678899988886 889999876543333222 346
Q ss_pred cCCCeE
Q psy11600 86 ANVDQY 91 (277)
Q Consensus 86 ag~d~i 91 (277)
+|++++
T Consensus 228 aGa~~v 233 (370)
T 3rmj_A 228 GGARQV 233 (370)
T ss_dssp TTCCEE
T ss_pred hCCCEE
Confidence 899987
No 369
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=66.01 E-value=22 Score=31.41 Aligned_cols=206 Identities=13% Similarity=0.071 Sum_probs=102.7
Q ss_pred HHHHHHHHHHcCCCEEEE-e---ccccccccC-CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEe
Q psy11600 20 LHSESQNLLDSGADYLHL-D---VMDGTFVPN-LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFH 94 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~-D---imDg~fvp~-~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H 94 (277)
..+..+.+++.|++++|+ | ..+..|-.. ..-.++.++.+++. .++|+.+...+.. .+.++.+.++|+|.++ -
T Consensus 30 ~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-~~iPv~~k~r~g~-~~~~~~~~a~GAd~V~-~ 106 (305)
T 2nv1_A 30 NAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-VSIPVMAKARIGH-IVEARVLEAMGVDYID-E 106 (305)
T ss_dssp SHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-CSSCEEEEECTTC-HHHHHHHHHHTCSEEE-E
T ss_pred HHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-CCCCEEecccccc-hHHHHHHHHCCCCEEE-E
Confidence 346777788899999753 3 112222110 11147899999986 6888877665544 4567788889999994 2
Q ss_pred ccCCCCCHHHHHH-HH--hhCCC-cccc--hhhhhHHHHhcCCCeEEeecCCCC-ChHHHHHHHHHh--CCccceeeCCC
Q psy11600 95 VEPVDNVPQVIRQ-IK--EAGMK-VGQV--LQDWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEA--GMKVGLAIKPK 165 (277)
Q Consensus 95 ~e~~d~g~~~i~~-i~--~~~~~-~~d~--p~~~i~~~~~~g~d~it~H~E~~~-~~~~~~~~I~~~--g~~~g~~i~p~ 165 (277)
.+..+ +..++. ++ +.... ..++ +.+..... ++|+|+|+++=|+.. .+.......+.. ++..=.|++..
T Consensus 107 ~~~l~--~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~-~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~ 183 (305)
T 2nv1_A 107 SEVLT--PADEEFHLNKNEYTVPFVCGCRDLGEATRRI-AEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSED 183 (305)
T ss_dssp CTTSC--CSCSSCCCCGGGCSSCEEEEESSHHHHHHHH-HTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred eccCC--HHHHHHHHHHhccCCcEEEEeCCHHHHHHHH-HCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccch
Confidence 22211 100100 00 11111 1122 44545444 889999999743210 122221111110 00000001100
Q ss_pred CCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCccEE--EeCCC-CcCcHHHHHHccCCC---CCc
Q psy11600 166 TPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIE--VDGGV-GPNTIDECAKCLTGF---GGQ 239 (277)
Q Consensus 166 t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~~i~--vdGgV-~~~tv~~~~~~gpg~---ggq 239 (277)
. ...+ +......++.++++++.. ++.+. ..||| +.+++.++.++|++. |+.
T Consensus 184 ~----~~~~------------------~~~~~~~~~~i~~i~~~~-~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsa 240 (305)
T 2nv1_A 184 E----LMTE------------------AKNLGAPYELLLQIKKDG-KLPVVNFAAGGVATPADAALMMQLGADGVFVGSG 240 (305)
T ss_dssp G----HHHH------------------HHHHTCCHHHHHHHHHHT-SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGG
T ss_pred h----hhcc------------------cccccccHHHHHHHHHhc-CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 0 0000 000111233455555432 33344 89999 899999999999885 666
Q ss_pred ccc-cCHHHHHHHHHh
Q psy11600 240 KFM-QDMMPKVKWLRE 254 (277)
Q Consensus 240 ~F~-~~~~~kI~~l~~ 254 (277)
.|. ++....++++++
T Consensus 241 i~~~~~p~~~~~~l~~ 256 (305)
T 2nv1_A 241 IFKSDNPAKFAKAIVE 256 (305)
T ss_dssp GGGSSCHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHH
Confidence 665 355556665554
No 370
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=65.96 E-value=47 Score=29.58 Aligned_cols=115 Identities=14% Similarity=0.208 Sum_probs=71.0
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCee--eeeeeccCcH---HhHHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFF--ETHMMVQNPQ---QWIEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~--d~Hlmv~~p~---~~i~~l~~ag~d 89 (277)
.+...+.++.+++.+.|.+.+=+.+-+ +.....+.++++|+..++.++ |+|--. ++. ++++.+.+.|++
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-----~~~~d~~~v~avr~~g~~~~l~vDan~~~-~~~~a~~~~~~l~~~~i~ 211 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKIKVGE-----NLKEDIEAVEEIAKVTRGAKYIVDANMGY-TQKEAVEFARAVYQKGID 211 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS-----CHHHHHHHHHHHHHHSTTCEEEEECTTCS-CHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEeecC-----CHHHHHHHHHHHHhhCCCCeEEEECCCCC-CHHHHHHHHHHHHhcCCC
Confidence 355566677777778898886554422 333446788999987445443 333111 233 357777888999
Q ss_pred --eEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeec
Q psy11600 90 --QYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 90 --~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~ 138 (277)
|+- |+.. .-....+++++.+..|+-. +.++.+.+..-.+|.+.+-+
T Consensus 212 ~~~iE---~P~~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~ 266 (345)
T 2zad_A 212 IAVYE---QPVRREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKL 266 (345)
T ss_dssp CSEEE---CCSCTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred eeeee---CCCCcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEec
Confidence 873 3322 2456778888877665532 55555555555689988843
No 371
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=65.91 E-value=24 Score=32.29 Aligned_cols=82 Identities=7% Similarity=-0.055 Sum_probs=54.2
Q ss_pred HHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCC---C----CCHHHHHHHHhhCCCcccc----hhh
Q psy11600 53 PVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPV---D----NVPQVIRQIKEAGMKVGQV----LQD 121 (277)
Q Consensus 53 ~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~---d----~g~~~i~~i~~~~~~~~d~----p~~ 121 (277)
+.++.+++. +.++.+-+...+..+..+.+.++|+|.+.+|.... - +....|+++++....|+-+ -.+
T Consensus 146 ~~i~~~~~~--g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e 223 (393)
T 2qr6_A 146 ERIAQVRDS--GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAGGVNDYT 223 (393)
T ss_dssp HHHHHHHHT--TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEECCCSHH
T ss_pred HHHHHHhhc--CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEECCcCCHH
Confidence 456666663 66666666555666677888889999999885321 1 1334578888887665533 223
Q ss_pred hhHHHHhcCCCeEEe
Q psy11600 122 WIEPMADANVDQYTF 136 (277)
Q Consensus 122 ~i~~~~~~g~d~it~ 136 (277)
-+..+.++|||.|.+
T Consensus 224 ~a~~~~~~Gad~i~v 238 (393)
T 2qr6_A 224 TALHMMRTGAVGIIV 238 (393)
T ss_dssp HHHHHHTTTCSEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 467778899999988
No 372
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=65.48 E-value=18 Score=33.81 Aligned_cols=115 Identities=10% Similarity=0.039 Sum_probs=70.1
Q ss_pred cHHHHHHHHHHcCCCEEEEeccccc----------------------c-ccCCCCCHHHHHHHHhcC-----CCCeeeee
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMDGT----------------------F-VPNLTFGHPVVKCLRNKI-----PKAFFETH 70 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimDg~----------------------f-vp~~~~g~~~v~~l~~~~-----~~~~~d~H 70 (277)
.+.+..+++.++|.|. |+|-=++ + -....|-.++|+++|+.+ +++++-+=
T Consensus 171 ~F~~AA~rA~~AGfDg--VEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vR 248 (419)
T 3l5a_A 171 QYRDATLRAIKAGFDG--VEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFR 248 (419)
T ss_dssp HHHHHHHHHHHTTCSE--EEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCE--EEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEe
Confidence 3445666788899999 6664333 1 111245567889999865 36666654
Q ss_pred eec------------cCcHHhHHHHHh-cCCCeEEEeccCC---------CC---CHHHHHHHHhhC--CCcccc-----
Q psy11600 71 MMV------------QNPQQWIEPMAD-ANVDQYTFHVEPV---------DN---VPQVIRQIKEAG--MKVGQV----- 118 (277)
Q Consensus 71 lmv------------~~p~~~i~~l~~-ag~d~i~~H~e~~---------d~---g~~~i~~i~~~~--~~~~d~----- 118 (277)
|-. .+..+.++.+.+ +|+|+|++|.-.. .+ ...+++.+|+.. ..|+-.
T Consensus 249 is~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~ 328 (419)
T 3l5a_A 249 ATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGIN 328 (419)
T ss_dssp ECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCC
T ss_pred cccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCC
Confidence 432 233446888889 9999998884211 11 235778888764 344422
Q ss_pred -hhhhhHHHHhcCCCeEEee
Q psy11600 119 -LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 119 -p~~~i~~~~~~g~d~it~H 137 (277)
|+.-.+.+.+ ||.|.|=
T Consensus 329 t~e~Ae~~L~~--aDlVaiG 346 (419)
T 3l5a_A 329 SPESALDALQH--ADMVGMS 346 (419)
T ss_dssp SHHHHHHHGGG--CSEEEES
T ss_pred CHHHHHHHHHh--CCcHHHH
Confidence 5544444444 9999884
No 373
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=65.26 E-value=23 Score=26.23 Aligned_cols=83 Identities=10% Similarity=0.068 Sum_probs=51.3
Q ss_pred eeeeeeccCcHHhHHHHHh-cCCCeEEEeccCCC--CCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeec
Q psy11600 67 FETHMMVQNPQQWIEPMAD-ANVDQYTFHVEPVD--NVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~-ag~d~i~~H~e~~d--~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~ 138 (277)
+.++ .+.+..+.++.+.+ ...|.+.+.+...+ .|.++++.+|+....++-+ -...+....++|++.+-.-.
T Consensus 30 ~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP 108 (140)
T 3h5i_A 30 YTVE-IALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEPAVVEKIRSVTAYGYVMKS 108 (140)
T ss_dssp CEEE-EESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSCCCCGGGGGSCEEEEEETT
T ss_pred CEEE-EecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHhCCCcEEEeCC
Confidence 3444 35567777777766 56788877766533 3788888888864444322 23355667778887665554
Q ss_pred CCCCChHHHHHHHHH
Q psy11600 139 EPVDNVPQVIRQIKE 153 (277)
Q Consensus 139 E~~~~~~~~~~~I~~ 153 (277)
- +...+.+.|+.
T Consensus 109 ~---~~~~l~~~i~~ 120 (140)
T 3h5i_A 109 A---TEQVLITIVEM 120 (140)
T ss_dssp C---CHHHHHHHHHH
T ss_pred C---CHHHHHHHHHH
Confidence 4 45556555554
No 374
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=65.21 E-value=55 Score=29.95 Aligned_cols=64 Identities=17% Similarity=0.125 Sum_probs=36.6
Q ss_pred HHHHHHHHcCCCEEEEeccccccccC-CCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 22 SESQNLLDSGADYLHLDVMDGTFVPN-LTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~DimDg~fvp~-~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
+-++.|.+.|+++ ++..| |. ...-.+.++.+++..++..+.+... .+ .+.++...++|++.+++
T Consensus 29 ~ia~~L~~~Gv~~-----IE~g~-p~~~~~~~~~~~~i~~~~~~~~v~~~~r-~~-~~di~~a~~~g~~~v~i 93 (382)
T 2ztj_A 29 EIAKALDEFGIEY-----IEVTT-PVASPQSRKDAEVLASLGLKAKVVTHIQ-CR-LDAAKVAVETGVQGIDL 93 (382)
T ss_dssp HHHHHHHHHTCSE-----EEECC-TTSCHHHHHHHHHHHTSCCSSEEEEEEE-SC-HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCcCE-----EEEcC-CcCCHHHHHHHHHHHhcCCCcEEEEEcc-cC-hhhHHHHHHcCCCEEEE
Confidence 4455667778776 44334 32 1112246777776544544443322 12 34488889999999853
No 375
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=64.91 E-value=61 Score=28.43 Aligned_cols=116 Identities=16% Similarity=0.082 Sum_probs=69.4
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCC-----CHHHHHHHHhc----CCCCeeeeeeeccC-----------
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTF-----GHPVVKCLRNK----IPKAFFETHMMVQN----------- 75 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~-----g~~~v~~l~~~----~~~~~~d~Hlmv~~----------- 75 (277)
+..+..+.++++++.|+..+|+ -|+.+-++-.. -.+.|+.+++. -+++.+-+ -+..
T Consensus 90 ~~~~~~~~v~~l~~aGaagv~i--ED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~a--Rtda~~~~~g~~~~~ 165 (275)
T 2ze3_A 90 APEDVRRTVEHFAALGVAGVNL--EDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNA--RTDTFLKGHGATDEE 165 (275)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE--ECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEE--ECCTTTTTCSSSHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEE--CCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEE--echhhhccccccchh
Confidence 3445567788899999999776 47653111111 12445555544 12222222 1111
Q ss_pred -cHH---hHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc----hhhhhHHHHhcCCCeEEeec
Q psy11600 76 -PQQ---WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV----LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 76 -p~~---~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~----p~~~i~~~~~~g~d~it~H~ 138 (277)
.++ -.+.+.++|||.+.++ ... ..+.++.+.+.-..|..+ |..-.++|.+.|+..+++..
T Consensus 166 ~~~~ai~Ra~ay~eAGAd~i~~e--~~~-~~~~~~~i~~~~~~P~n~~~~~~~~~~~eL~~lGv~~v~~~~ 233 (275)
T 2ze3_A 166 RLAETVRRGQAYADAGADGIFVP--LAL-QSQDIRALADALRVPLNVMAFPGSPVPRALLDAGAARVSFGQ 233 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECT--TCC-CHHHHHHHHHHCSSCEEEECCTTSCCHHHHHHTTCSEEECTT
T ss_pred hHHHHHHHHHHHHHCCCCEEEEC--CCC-CHHHHHHHHHhcCCCEEEecCCCCCCHHHHHHcCCcEEEECh
Confidence 122 2556788999999444 332 356788887776666543 34446999999999999965
No 376
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=64.81 E-value=58 Score=30.76 Aligned_cols=169 Identities=8% Similarity=0.067 Sum_probs=102.5
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCC--CCCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCC--ChH
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPV--DNVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVD--NVP 145 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~--d~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~--~~~ 145 (277)
+|.+..+.+.++ |..|++--|.. .|+...++++|+.+..|+.. +...+.+...+|||.|.+-.-.-. .+.
T Consensus 69 ~~~~iA~~y~~~-A~~IsvLTd~~~F~gs~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~ 147 (452)
T 1pii_A 69 DPARIAAIYKHY-ASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYR 147 (452)
T ss_dssp CHHHHHHHHTTT-CSEEEEECCSTTTCCCTTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHH
T ss_pred CHHHHHHHHHhh-CcEEEEEecccccCCCHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEcccCCHHHHH
Confidence 677778888877 99999877753 45888999999998877643 455677799999999988774111 123
Q ss_pred HHHHHHHHhCCccceeeCCCC-CHHhHHHHHhhcCceEEEEecC-CCCCchhhhhhhhhHHHHHhhCC-CccEEEeCCCC
Q psy11600 146 QVIRQIKEAGMKVGLAIKPKT-PVDVIAEYIESADLVLIMTVEP-GFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVG 222 (277)
Q Consensus 146 ~~~~~I~~~g~~~g~~i~p~t-~~~~i~~~i~~~d~vl~mav~P-gt~gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV~ 222 (277)
++++.+++.|+. .-..+ ..+++...+. .+.- ++.+|+ +.. .|-.+ ++...++.+..| ++.+.--+||+
T Consensus 148 ~l~~~a~~lgm~----~LvEvh~~eE~~~A~~-lga~-iIGinnr~L~--t~~~d-l~~~~~L~~~ip~~~~vIaEsGI~ 218 (452)
T 1pii_A 148 QLAAVAHSLEMG----VLTEVSNEEEQERAIA-LGAK-VVGINNRDLR--DLSID-LNRTRELAPKLGHNVTVISESGIN 218 (452)
T ss_dssp HHHHHHHHTTCE----EEEEECSHHHHHHHHH-TTCS-EEEEESEETT--TTEEC-THHHHHHHHHHCTTSEEEEESCCC
T ss_pred HHHHHHHHcCCe----EEEEeCCHHHHHHHHH-CCCC-EEEEeCCCCC--CCCCC-HHHHHHHHHhCCCCCeEEEECCCC
Confidence 445555555433 22221 2334443333 2322 234444 321 12222 445555555544 56667788886
Q ss_pred -cCcHHHHHHccCCC---CCcccc-cCHHHHHHHHHh
Q psy11600 223 -PNTIDECAKCLTGF---GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 223 -~~tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~ 254 (277)
.+.+..+.++ ++. |+..+. ++..+++++|..
T Consensus 219 t~edv~~~~~~-a~avLVGealmr~~d~~~~~~~l~~ 254 (452)
T 1pii_A 219 TYAQVRELSHF-ANGFLIGSALMAHDDLHAAVRRVLL 254 (452)
T ss_dssp CHHHHHHHTTT-CSEEEECHHHHTCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHH
Confidence 3555556666 552 666666 478888888874
No 377
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=64.76 E-value=43 Score=30.43 Aligned_cols=144 Identities=10% Similarity=0.138 Sum_probs=85.9
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcHH---hHHHHHhc-CCCeE
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQQ---WIEPMADA-NVDQY 91 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~~---~i~~l~~a-g~d~i 91 (277)
..+.++.+++.+.|.+.+-+.+-+ +++.+..+.++++|+.+ ++.++-+..--. ++.+ +++.+.+. |++|+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~----~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~i 216 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGG----TSFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWL 216 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSS----SCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC----CCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEE
Confidence 556677777888898886665533 23456668899999876 455443332111 2333 46667777 87777
Q ss_pred EEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCcccee
Q psy11600 92 TFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVGLA 161 (277)
Q Consensus 92 ~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g~~ 161 (277)
- ++.. ......+.+++.+..|+-. +.++.+.+.+-.+|.+.+-+--.+.+. ++.+..++.|+..-.+
T Consensus 217 E---qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 217 E---EPLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp E---CCSCSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred E---CCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 2 2221 2466778888877665522 555555555556899888654111122 4445556667666566
Q ss_pred eCCCCCHH
Q psy11600 162 IKPKTPVD 169 (277)
Q Consensus 162 i~p~t~~~ 169 (277)
..++++.
T Consensus 294 -~~es~i~ 300 (382)
T 2gdq_A 294 -AYDGSLS 300 (382)
T ss_dssp -CSSCSHH
T ss_pred -CCCcHHH
Confidence 5666654
No 378
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=64.55 E-value=35 Score=31.22 Aligned_cols=133 Identities=15% Similarity=0.171 Sum_probs=74.4
Q ss_pred hhhhhHHHHhcC--CCeEEeecC-CC-------C---ChHHHHHHHHH--------hCCccceeeCCCCCHHhH---HHH
Q psy11600 119 LQDWIEPMADAN--VDQYTFHVE-PV-------D---NVPQVIRQIKE--------AGMKVGLAIKPKTPVDVI---AEY 174 (277)
Q Consensus 119 p~~~i~~~~~~g--~d~it~H~E-~~-------~---~~~~~~~~I~~--------~g~~~g~~i~p~t~~~~i---~~~ 174 (277)
+++|++.+...+ +|++.+-+- |. + .+.++++.+++ ......+-+.|+.+.+.+ .+.
T Consensus 163 ~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~ 242 (367)
T 3zwt_A 163 AEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASV 242 (367)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHH
Confidence 677777655544 898888653 00 0 11244444443 233446677788765444 444
Q ss_pred HhhcCceEEEEecC-----------------CCCCchhhhhhhhhHHHHHhhCC-CccEEEeCCCC-cCcHHHHHHccCC
Q psy11600 175 IESADLVLIMTVEP-----------------GFGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVG-PNTIDECAKCLTG 235 (277)
Q Consensus 175 i~~~d~vl~mav~P-----------------gt~gq~~~~~~l~kI~~l~~~~~-~~~i~vdGgV~-~~tv~~~~~~gpg 235 (277)
+.+.+.-.+...|- |.+|...-+..++.|.++++..+ ++.+...|||. .+.+.++.++|++
T Consensus 243 ~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd 322 (367)
T 3zwt_A 243 VKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGAS 322 (367)
T ss_dssp HHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCS
T ss_pred HHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCC
Confidence 44443332232221 11222233445567788877665 78999999995 4556667778888
Q ss_pred C---CCcc-cc-cCHHHHHHH
Q psy11600 236 F---GGQK-FM-QDMMPKVKW 251 (277)
Q Consensus 236 ~---ggq~-F~-~~~~~kI~~ 251 (277)
. |... +. |...++|++
T Consensus 323 ~V~vgra~l~~gP~~~~~i~~ 343 (367)
T 3zwt_A 323 LVQLYTALTFWGPPVVGKVKR 343 (367)
T ss_dssp EEEESHHHHHHCTHHHHHHHH
T ss_pred EEEECHHHHhcCcHHHHHHHH
Confidence 5 4443 22 566666654
No 379
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=64.49 E-value=39 Score=30.78 Aligned_cols=152 Identities=13% Similarity=0.125 Sum_probs=91.1
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcHH---hHH
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQQ---WIE 81 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~~---~i~ 81 (277)
.+..|+...+...+.++.+.+.+.|.+.+=+.+ |. +..--.+.++++|+.+ ++.++-+..--. ++.+ .++
T Consensus 136 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~--G~---~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~ 210 (378)
T 3eez_A 136 PIASSVGAKSVEETRAVIDRYRQRGYVAHSVKI--GG---DVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMR 210 (378)
T ss_dssp EBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEEC--CS---CHHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHH
T ss_pred EEEEEecCCCHHHHHHHHHHHHhCCCCEEEecc--CC---CHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHH
Confidence 345566667777888888888888999865554 21 1122346788899876 455443332111 2333 456
Q ss_pred HHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHH
Q psy11600 82 PMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIK 152 (277)
Q Consensus 82 ~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~ 152 (277)
.+.+.|+ |+. |+.. ....++.+++.+..|+-. +.++.+.+..-++|.+-+-+-..+-+. ++.+..+
T Consensus 211 ~l~~~~i-~iE---qP~~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~ 285 (378)
T 3eez_A 211 ATEDLHV-MFE---QPGE-TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIAL 285 (378)
T ss_dssp HTGGGTC-CEE---CCSS-SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHH
T ss_pred HhccCCe-EEe---cCCC-CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHH
Confidence 6667787 772 4443 567788888887766532 666666666667899988653111122 3445555
Q ss_pred HhCCccceeeCCCCCH
Q psy11600 153 EAGMKVGLAIKPKTPV 168 (277)
Q Consensus 153 ~~g~~~g~~i~p~t~~ 168 (277)
+.|+..-.+-..++++
T Consensus 286 ~~g~~~~~~~~~es~i 301 (378)
T 3eez_A 286 THGIDMFVMATGGSVL 301 (378)
T ss_dssp HTTCEEEEECSSCSHH
T ss_pred HcCCEEEcCCCCCCHH
Confidence 6665555555555555
No 380
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=64.28 E-value=66 Score=28.44 Aligned_cols=119 Identities=13% Similarity=0.055 Sum_probs=68.7
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCC-C--------H-HHH---HHHHhcC--CCCeeeeeeec----cCc
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTF-G--------H-PVV---KCLRNKI--PKAFFETHMMV----QNP 76 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~-g--------~-~~v---~~l~~~~--~~~~~d~Hlmv----~~p 76 (277)
+..+..+.+++++++|+..+|+ -|+.+.|-.+. | . +.+ +..++.- ++..+-+---. ...
T Consensus 88 ~~~~~~~~v~~l~~aGa~gv~i--ED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 165 (290)
T 2hjp_A 88 NAVNVHYVVPQYEAAGASAIVM--EDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQ 165 (290)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEE--ECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCH
T ss_pred CHHHHHHHHHHHHHhCCeEEEE--cCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccH
Confidence 4456677788899999999775 47766443221 1 1 334 4443331 33333221111 112
Q ss_pred HH---hHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCC--Ccccc-----hhhhhHHHHhcC-CCeEEeec
Q psy11600 77 QQ---WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGM--KVGQV-----LQDWIEPMADAN-VDQYTFHV 138 (277)
Q Consensus 77 ~~---~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~--~~~d~-----p~~~i~~~~~~g-~d~it~H~ 138 (277)
++ -...+.++|||.+.++.- .. .++.++.+.+.-. .|.-+ |.--.++|.+.| +..+++..
T Consensus 166 ~~ai~Ra~ay~eAGAd~i~~e~~-~~-~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~ 236 (290)
T 2hjp_A 166 QEAVRRGQAYEEAGADAILIHSR-QK-TPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGN 236 (290)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCC-CS-SSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECS
T ss_pred HHHHHHHHHHHHcCCcEEEeCCC-CC-CHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEech
Confidence 33 356778899999965541 21 2356677766554 44331 444569999999 99999975
No 381
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=64.20 E-value=19 Score=31.33 Aligned_cols=108 Identities=9% Similarity=-0.002 Sum_probs=64.4
Q ss_pred HHHHHHHcCCCEEEEeccccccccC-CCCCHHHHHHHHhcCC-C---Ceeeee------eec----------cCcH-HhH
Q psy11600 23 ESQNLLDSGADYLHLDVMDGTFVPN-LTFGHPVVKCLRNKIP-K---AFFETH------MMV----------QNPQ-QWI 80 (277)
Q Consensus 23 ~~~~l~~~~~~~~h~DimDg~fvp~-~~~g~~~v~~l~~~~~-~---~~~d~H------lmv----------~~p~-~~i 80 (277)
+++++. .|++.+- +.+.-+.| -.+.|+.++++-+.+. + +.+|+- ..| .++. +++
T Consensus 89 ~~~~~l-~Ga~~Vi---igs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a 164 (260)
T 2agk_A 89 NCLEWL-KWASKVI---VTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTF 164 (260)
T ss_dssp THHHHT-TTCSCEE---ECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHH
T ss_pred HHHHHh-cCCCEEE---ECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHH
Confidence 556666 8999853 45444555 5566888888877665 2 234442 111 1456 889
Q ss_pred HHHHhcCCCeEEEeccCCCC-----CHHHHHHHHhhC----CCcccc------hhhhhHHHHhc-CCCeEE
Q psy11600 81 EPMADANVDQYTFHVEPVDN-----VPQVIRQIKEAG----MKVGQV------LQDWIEPMADA-NVDQYT 135 (277)
Q Consensus 81 ~~l~~ag~d~i~~H~e~~d~-----g~~~i~~i~~~~----~~~~d~------p~~~i~~~~~~-g~d~it 135 (277)
+.+.++ ++.+.+|--..+| -.++++.+++.. ..|+-. |++..+.+... |++-+.
T Consensus 165 ~~~~~~-a~~il~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvi 234 (260)
T 2agk_A 165 RELRKY-TNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLT 234 (260)
T ss_dssp HHHTTT-CSEEEEEC-------CCCCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHh-cCEEEEEeeccccCcCCCCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEE
Confidence 999999 9999999654443 456788888776 555432 44444443333 555444
No 382
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=64.17 E-value=11 Score=34.67 Aligned_cols=47 Identities=11% Similarity=0.060 Sum_probs=38.3
Q ss_pred CCCCHHH-------HHHHHhcCCCCeeeeeeeccCcHHhHHHHH-----hcCCCeEEEecc
Q psy11600 48 LTFGHPV-------VKCLRNKIPKAFFETHMMVQNPQQWIEPMA-----DANVDQYTFHVE 96 (277)
Q Consensus 48 ~~~g~~~-------v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~-----~ag~d~i~~H~e 96 (277)
..+|++. |+++|+. ++++-++++..|..+.+..+. ..|+|++|+|.-
T Consensus 140 ea~G~~gi~~L~~~v~~lr~~--g~~VflDlK~~DIgnTva~ya~a~~~~lgaD~vTVhp~ 198 (353)
T 2ffc_A 140 LPYGSLGVDVLKNVFDYLHHL--NVPTILDIKMNDIGNTVKHYRKFIFDYLRSDSCTANIY 198 (353)
T ss_dssp STTTHHHHHHHHHHHHHHHHH--TCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCT
T ss_pred HhcCHHHHHHHHHHHHHHHHc--CCcEEEEEecCchHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4579988 7888875 889999999999887655554 589999999964
No 383
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=64.14 E-value=7.6 Score=39.08 Aligned_cols=71 Identities=21% Similarity=0.317 Sum_probs=52.3
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC---cHHhHHHHHhcCCCe
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN---PQQWIEPMADANVDQ 90 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~---p~~~i~~l~~ag~d~ 90 (277)
|+..+-+.++.+.+.|++. +=+-| |...|+-. .+.++.+|+.+|++++.+|.=-.. ..+.+. ..++||++
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~--I~l~DT~G~~~P~~v--~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANsla-AveAGa~~ 333 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHI--LCIKDMAGLLKPTAC--TMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLA-CAQAGADV 333 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSE--EEEECTTSCCCHHHH--HHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHH-HHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCE--EEEcCcCCCcCHHHH--HHHHHHHHHhCCCCeEEEEECCCccHHHHHHHH-HHHhCCCE
Confidence 5566778888899999999 66677 66666533 367999999888899999986654 333343 35689998
Q ss_pred E
Q psy11600 91 Y 91 (277)
Q Consensus 91 i 91 (277)
+
T Consensus 334 V 334 (718)
T 3bg3_A 334 V 334 (718)
T ss_dssp E
T ss_pred E
Confidence 8
No 384
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=63.98 E-value=23 Score=31.49 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=63.7
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEe
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFH 94 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H 94 (277)
+.+-++..+.+++.|+|+|=+=|=- |.|-.+-.+.++.++++++. .++|+..|==..-|.+.+++..+.|+.-+-+.
T Consensus 158 yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~-v~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~ 236 (288)
T 3q94_A 158 YADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDF-TGVPLVLHGGTGIPTADIEKAISLGTSKINVN 236 (288)
T ss_dssp CCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHH-HCSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHh-cCCCEEEeCCCCCCHHHHHHHHHcCCeEEEEC
Confidence 4677788888889999998777765 66644445777999999987 67999999999999999999999999888444
No 385
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=63.90 E-value=36 Score=31.04 Aligned_cols=146 Identities=10% Similarity=0.096 Sum_probs=85.3
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeec-cCcH---HhHHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMV-QNPQ---QWIEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv-~~p~---~~i~~l~~ag~d 89 (277)
.+...+.++.+++.+.|.+.+=+.+-+ ++.+..+.++++|+.+ +++++-+..-- -++. ++++.+.+.|++
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-----~~~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 218 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGG-----PLKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLS 218 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCS-----CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCS
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccC-----CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 355566677777777888886554421 3345568899999875 45544333211 1233 356677778999
Q ss_pred eEEEeccCC-CCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCccc
Q psy11600 90 QYTFHVEPV-DNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVG 159 (277)
Q Consensus 90 ~i~~H~e~~-d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g 159 (277)
|+- ++. .......+.+++.+..|+-. +.++-+.+.+-.+|.+.+-+--.+-+. ++.+..++.|+..-
T Consensus 219 ~iE---qP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~ 295 (397)
T 2qde_A 219 KIE---QPLPAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVI 295 (397)
T ss_dssp CEE---CCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEE
T ss_pred EEE---CCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEE
Confidence 883 222 22466778888877665522 555555555566899988542000122 34455556666655
Q ss_pred eeeCCCCCH
Q psy11600 160 LAIKPKTPV 168 (277)
Q Consensus 160 ~~i~p~t~~ 168 (277)
.+...++++
T Consensus 296 ~~~~~es~i 304 (397)
T 2qde_A 296 CGCMVGSGL 304 (397)
T ss_dssp ECCCSCCHH
T ss_pred EecCcccHH
Confidence 555555554
No 386
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=63.88 E-value=29 Score=31.12 Aligned_cols=72 Identities=18% Similarity=0.233 Sum_probs=54.1
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccc--ccccc--CCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCC
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMD--GTFVP--NLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVD 89 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp--~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d 89 (277)
+.+-++..+.+++.|+|+|=+=|=- |.|-| +-.+.++.++++++. .++|+..|==.+=|.++++.+++.|.+
T Consensus 152 yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~-~~vpLVlHGgSsv~~~~~~~~~~~gg~ 227 (305)
T 1rvg_A 152 LTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARL-VPAPLVLHGASAVPPELVERFRASGGE 227 (305)
T ss_dssp CCCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHH-CCSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHh-cCCCEEEeCCCCCcHHHHHHHHhhccc
Confidence 4677888888999999998888776 66652 345677999999998 459999999995555555555555544
No 387
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=63.84 E-value=76 Score=27.84 Aligned_cols=87 Identities=8% Similarity=0.148 Sum_probs=51.5
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeec--cCcHHhHHHHHhcCCCeEEE
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMV--QNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv--~~p~~~i~~l~~ag~d~i~~ 93 (277)
+...+.+.++.+.+.|+.. +.+.-|.-.=+-.+ .++++.+++. ..+ ..+.+-+ ..+.+.++.+.++|.+++.+
T Consensus 51 s~e~i~~~i~~~~~~g~~~--i~~tGGEPll~~~l-~~li~~~~~~-~~~-~~i~i~TNG~ll~~~~~~L~~~g~~~v~i 125 (340)
T 1tv8_A 51 TFDEMARIAKVYAELGVKK--IRITGGEPLMRRDL-DVLIAKLNQI-DGI-EDIGLTTNGLLLKKHGQKLYDAGLRRINV 125 (340)
T ss_dssp CHHHHHHHHHHHHHTTCCE--EEEESSCGGGSTTH-HHHHHHHTTC-TTC-CEEEEEECSTTHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCE--EEEeCCCccchhhH-HHHHHHHHhC-CCC-CeEEEEeCccchHHHHHHHHHCCCCEEEE
Confidence 3445666677777778887 55566653211112 3677777764 322 1444432 12455788999999999988
Q ss_pred eccCCCCCHHHHHHHH
Q psy11600 94 HVEPVDNVPQVIRQIK 109 (277)
Q Consensus 94 H~e~~d~g~~~i~~i~ 109 (277)
-+|..+ +...+.++
T Consensus 126 Sld~~~--~~~~~~i~ 139 (340)
T 1tv8_A 126 SLDAID--DTLFQSIN 139 (340)
T ss_dssp ECCCSS--HHHHHHHH
T ss_pred ecCCCC--HHHHHHhh
Confidence 877654 44444444
No 388
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=63.51 E-value=19 Score=32.87 Aligned_cols=65 Identities=12% Similarity=0.041 Sum_probs=41.4
Q ss_pred HHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcC-CCeE
Q psy11600 22 SESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADAN-VDQY 91 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag-~d~i 91 (277)
+-.+.|++.|+|++|+-- +.+...-.+..+.++.+|+. .++|+-+-=-+ +++... .+.+.| +|.+
T Consensus 254 ~~a~~l~~~G~d~i~v~~--~~~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi-~~~~a~-~~l~~g~aD~V 319 (365)
T 2gou_A 254 AAAALLNKHRIVYLHIAE--VDWDDAPDTPVSFKRALREA-YQGVLIYAGRY-NAEKAE-QAINDGLADMI 319 (365)
T ss_dssp HHHHHHHHTTCSEEEEEC--CBTTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHH-HHHHTTSCSEE
T ss_pred HHHHHHHHcCCCEEEEeC--CCcCCCCCccHHHHHHHHHH-CCCcEEEeCCC-CHHHHH-HHHHCCCccee
Confidence 346788999999977643 33321112456789999987 56776553334 565554 455555 9988
No 389
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=63.40 E-value=23 Score=31.50 Aligned_cols=85 Identities=13% Similarity=0.055 Sum_probs=57.0
Q ss_pred HHHHHhcCCCCeeeeeeeccCcHH----hHHHHHhcCCCeEEEec--------------cCCCCCHHHHHHHHhhCCC-c
Q psy11600 55 VKCLRNKIPKAFFETHMMVQNPQQ----WIEPMADANVDQYTFHV--------------EPVDNVPQVIRQIKEAGMK-V 115 (277)
Q Consensus 55 v~~l~~~~~~~~~d~Hlmv~~p~~----~i~~l~~ag~d~i~~H~--------------e~~d~g~~~i~~i~~~~~~-~ 115 (277)
-+++.....+.|+-+-+-..+|.. +++.+.++|+.-+.=|. |.--+-.+.++.|++.... .
T Consensus 85 ~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL 164 (286)
T 2p10_A 85 AREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDL 164 (286)
T ss_dssp HHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTC
T ss_pred HHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHhCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCC
Confidence 344444555789999988888876 57888889999887776 4332334445555544322 1
Q ss_pred ccc----hhhhhHHHHhcCCCeEEeecC
Q psy11600 116 GQV----LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 116 ~d~----p~~~i~~~~~~g~d~it~H~E 139 (277)
..+ -.+-..+++++|+|+|..|+.
T Consensus 165 ~Ti~~v~~~eeA~amA~agpDiI~~h~g 192 (286)
T 2p10_A 165 LTTPYVFSPEDAVAMAKAGADILVCHMG 192 (286)
T ss_dssp EECCEECSHHHHHHHHHHTCSEEEEECS
T ss_pred eEEEecCCHHHHHHHHHcCCCEEEECCC
Confidence 111 345667899999999999986
No 390
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=62.97 E-value=23 Score=31.98 Aligned_cols=118 Identities=10% Similarity=0.078 Sum_probs=71.4
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCC-C----------HHHHHHHHhcC--CCCeeeeeeecc------Cc
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTF-G----------HPVVKCLRNKI--PKAFFETHMMVQ------NP 76 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~-g----------~~~v~~l~~~~--~~~~~d~Hlmv~------~p 76 (277)
+..+..+-++++++.|+..+|+ -|+.+.|-.+. | -+.|+..++.- +++.+-+---.. ..
T Consensus 114 ~~~~v~~tv~~l~~aGaagv~i--ED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~a 191 (318)
T 1zlp_A 114 GPLNVQRFIRELISAGAKGVFL--EDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEG 191 (318)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE--ECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEE--CCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHH
Confidence 4456677888899999999775 57765443221 1 12344444331 333332211110 12
Q ss_pred HHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc--------hhhhhHHHHhcCCCeEEeec
Q psy11600 77 QQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV--------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 77 ~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~--------p~~~i~~~~~~g~d~it~H~ 138 (277)
.+-.+.+.++|||.+.++ ... .++.++.+.+.-..|..+ |.--.++|.+.|+..+++..
T Consensus 192 i~Ra~Ay~eAGAd~i~~e--~~~-~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~ 258 (318)
T 1zlp_A 192 IRRANLYKEAGADATFVE--APA-NVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSL 258 (318)
T ss_dssp HHHHHHHHHTTCSEEEEC--CCC-SHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHcCCCEEEEc--CCC-CHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEch
Confidence 223567788999999655 332 457788887776666531 34447999999999999975
No 391
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=62.94 E-value=80 Score=27.90 Aligned_cols=110 Identities=16% Similarity=0.177 Sum_probs=63.7
Q ss_pred HHHHHcCCCEEEEecccccc-----ccC---CCCC--HHHHHHHHhcCCCCeeeeeeecc----CcHHh----HHHHHhc
Q psy11600 25 QNLLDSGADYLHLDVMDGTF-----VPN---LTFG--HPVVKCLRNKIPKAFFETHMMVQ----NPQQW----IEPMADA 86 (277)
Q Consensus 25 ~~l~~~~~~~~h~DimDg~f-----vp~---~~~g--~~~v~~l~~~~~~~~~d~Hlmv~----~p~~~----i~~l~~a 86 (277)
+.++++|+|.+- +-|+-- .|+ +|+. ....+++++.-+..++.+++=.. +|++. .+.+.++
T Consensus 48 ~l~e~aG~d~il--vGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~~ea 125 (281)
T 1oy0_A 48 RIFDEAGIPVLL--VGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDG 125 (281)
T ss_dssp HHHHTTTCCEEE--ECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCEEE--ECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHHHHHHHHh
Confidence 446778999864 333110 111 2232 24567777764445666776653 56653 4455669
Q ss_pred CCCeEEEeccCCCCCHHHHHHHHhhCCCcc----cc---------------------hhhhhHHHHhcCCCeEEeec
Q psy11600 87 NVDQYTFHVEPVDNVPQVIRQIKEAGMKVG----QV---------------------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 87 g~d~i~~H~e~~d~g~~~i~~i~~~~~~~~----d~---------------------p~~~i~~~~~~g~d~it~H~ 138 (277)
|++-+ ++|-...-.+.|+++.+....+. .. -.+....+.++||+.+.+..
T Consensus 126 Ga~aV--klEdg~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~ 200 (281)
T 1oy0_A 126 GAHAV--KLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEM 200 (281)
T ss_dssp CCSEE--EEEBSGGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCeEE--EECCcHHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 99999 87743334667777776643211 00 12244677888999888864
No 392
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=62.92 E-value=46 Score=25.01 Aligned_cols=79 Identities=10% Similarity=-0.037 Sum_probs=49.3
Q ss_pred eccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhC---CCcccc-----hhhhhHHHHhcCCCeEEeecCCCC
Q psy11600 72 MVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAG---MKVGQV-----LQDWIEPMADANVDQYTFHVEPVD 142 (277)
Q Consensus 72 mv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~---~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~ 142 (277)
.+.++.+.++.+.+...|.+.+.++..+. |.++++.+|+.. ..++-+ ....+....++|++.+-.-+-
T Consensus 36 ~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~--- 112 (154)
T 3gt7_A 36 HVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPC--- 112 (154)
T ss_dssp EESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSC---
T ss_pred EeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCC---
Confidence 34567777777776777888766664332 788888888763 223322 344566667888876655544
Q ss_pred ChHHHHHHHHH
Q psy11600 143 NVPQVIRQIKE 153 (277)
Q Consensus 143 ~~~~~~~~I~~ 153 (277)
+...+...++.
T Consensus 113 ~~~~l~~~i~~ 123 (154)
T 3gt7_A 113 KDVVLASHVKR 123 (154)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 45566665554
No 393
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=62.91 E-value=83 Score=28.65 Aligned_cols=140 Identities=9% Similarity=0.099 Sum_probs=84.2
Q ss_pred ccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHhcCC
Q psy11600 14 NSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMADANV 88 (277)
Q Consensus 14 ~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ag~ 88 (277)
..+...+.++.+.+.+.|.+.+=+.+ |. +.....+.++++|+.+ ++.++-+..--. ++. +.++.+.+.|+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKv--G~---~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i 223 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKV--GR---APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGC 223 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEEC--CS---CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeecc--CC---CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCC
Confidence 35666778888888888999865554 22 2233457788999876 455543332111 233 34677888899
Q ss_pred CeEEEeccCCC-CCHHHHHHHH-hhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCc
Q psy11600 89 DQYTFHVEPVD-NVPQVIRQIK-EAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMK 157 (277)
Q Consensus 89 d~i~~H~e~~d-~g~~~i~~i~-~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~ 157 (277)
+|+. |+.. .....+++++ +.+..|+-. +.++.+.+..-.+|.+-+-+--.+-+. ++.+..++.|+.
T Consensus 224 ~~iE---qP~~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~ 300 (389)
T 3ozy_A 224 YWFE---EPLSIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLA 300 (389)
T ss_dssp SEEE---SCSCTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCE
T ss_pred CEEE---CCCCcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCE
Confidence 9983 3322 2466788888 777666532 555555556666899888664222233 344445555544
Q ss_pred ccee
Q psy11600 158 VGLA 161 (277)
Q Consensus 158 ~g~~ 161 (277)
.-.+
T Consensus 301 ~~~h 304 (389)
T 3ozy_A 301 WNPH 304 (389)
T ss_dssp ECCC
T ss_pred EEec
Confidence 4333
No 394
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=62.85 E-value=25 Score=31.92 Aligned_cols=124 Identities=10% Similarity=-0.060 Sum_probs=75.3
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCC-EEEEeccccccccCCC----C--CH----HHHHHHHhcCCCCeeeeeeecc-
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGAD-YLHLDVMDGTFVPNLT----F--GH----PVVKCLRNKIPKAFFETHMMVQ- 74 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~-~~h~DimDg~fvp~~~----~--g~----~~v~~l~~~~~~~~~d~Hlmv~- 74 (277)
-+..||...+...+.+..+.+++.|.+ ++=+. -.+||.. + .+ ++++++|+. +++|+.+=|-..
T Consensus 130 pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielN----isCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV~vKi~p~~ 204 (345)
T 3oix_A 130 NHFLSLVGMSPEETHTILXMVEASKYQGLVELN----LSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPLGIKLPPYF 204 (345)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEE----CSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHhccCCCcEEEEe----cCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCeEEEECCCC
Confidence 467788888889999999999887766 63332 2344432 2 23 456677764 677776655432
Q ss_pred CcHHhHHHHHhcCCCeEE-------------EeccCC-------CC---C-------HHHHHHHHhhC--CCcccc----
Q psy11600 75 NPQQWIEPMADANVDQYT-------------FHVEPV-------DN---V-------PQVIRQIKEAG--MKVGQV---- 118 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~-------------~H~e~~-------d~---g-------~~~i~~i~~~~--~~~~d~---- 118 (277)
+..+..+.+.++|++.++ +|-+.. .+ | .++|+++++.. ..|+-.
T Consensus 205 ~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI 284 (345)
T 3oix_A 205 DIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGV 284 (345)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSC
T ss_pred CHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCC
Confidence 556667777777877553 342210 01 1 35677777765 334321
Q ss_pred --hhhhhHHHHhcCCCeEEe
Q psy11600 119 --LQDWIEPMADANVDQYTF 136 (277)
Q Consensus 119 --p~~~i~~~~~~g~d~it~ 136 (277)
+++..+.+ .+|||.|-+
T Consensus 285 ~s~~da~~~l-~aGAd~V~i 303 (345)
T 3oix_A 285 XTGRDAFEHI-LCGASMVQI 303 (345)
T ss_dssp CSHHHHHHHH-HHTCSEEEE
T ss_pred CChHHHHHHH-HhCCCEEEE
Confidence 56655555 478887766
No 395
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=62.74 E-value=68 Score=26.90 Aligned_cols=119 Identities=16% Similarity=0.169 Sum_probs=65.8
Q ss_pred HHHHHHHHcCCCEEEEec-cc-cccccCCC--CCHHHHHHHHhcCCCCeeeeeeeccC----c---HHhHHHHHhcCCCe
Q psy11600 22 SESQNLLDSGADYLHLDV-MD-GTFVPNLT--FGHPVVKCLRNKIPKAFFETHMMVQN----P---QQWIEPMADANVDQ 90 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~Di-mD-g~fvp~~~--~g~~~v~~l~~~~~~~~~d~Hlmv~~----p---~~~i~~l~~ag~d~ 90 (277)
.+.++..+.|+|. +|+ ++ |.+ .+-. .-.+.++++++.. + |+-+=++... + .+..+.+.++|+|+
T Consensus 74 ~~~~~A~~~Gad~--Id~viN~g~~-~~~~~~~~~~~i~~v~~a~-~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~ 148 (225)
T 1mzh_A 74 KEAVEAVRDGAQE--LDIVWNLSAF-KSEKYDFVVEELKEIFRET-P-SAVHKVIVETPYLNEEEIKKAVEICIEAGADF 148 (225)
T ss_dssp HHHHHHHHTTCSE--EEEECCHHHH-HTTCHHHHHHHHHHHHHTC-T-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCE--EEEEecHHHH-hcCChHHHHHHHHHHHHHh-c-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCE
Confidence 4556777889999 662 11 110 0001 1124577888764 3 5544333222 2 22366777889999
Q ss_pred EEEeccCC--CC--CHHHHHHHHhhC--CCcccc------hhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHH
Q psy11600 91 YTFHVEPV--DN--VPQVIRQIKEAG--MKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKE 153 (277)
Q Consensus 91 i~~H~e~~--d~--g~~~i~~i~~~~--~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~ 153 (277)
+ +.-.. .+ ....++.+++.. ..|+-. +++..+.+ ++|||.|..= ...++++-+++
T Consensus 149 I--~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l-~aGA~~iG~s-----~~~~i~~~~~~ 215 (225)
T 1mzh_A 149 I--KTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMI-EAGADRIGTS-----SGISIAEEFLK 215 (225)
T ss_dssp E--ECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH-HTTCSEEEES-----CHHHHHHHHHH
T ss_pred E--EECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHH-HhCchHHHHc-----cHHHHHHHHHh
Confidence 9 54431 12 567888888864 344432 55555555 5899976552 34455555543
No 396
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=62.40 E-value=13 Score=35.23 Aligned_cols=94 Identities=10% Similarity=-0.008 Sum_probs=60.9
Q ss_pred eeccccCccc------HHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcC----CCCeeeeeeeccCcH
Q psy11600 10 PSILNSDLSN------LHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKI----PKAFFETHMMVQNPQ 77 (277)
Q Consensus 10 ~s~~~~d~~~------l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~----~~~~~d~Hlmv~~p~ 77 (277)
|=+.+.|+.. .+...+.+++. .++ ++..- -.|. ..+|++.++.|++.+ +++++-.+++..|..
T Consensus 16 ~l~vaLD~~~~~~~~~~~~a~~~v~~~-~~~--v~~~Kvg~~lf--~~~G~~~v~~L~~~~~~~~~g~~VflDlK~~DIp 90 (453)
T 3qw4_B 16 LLCVGLDPRAKTAAAAVEECKRLIEQT-HEY--AAAYKPNAAFF--EFFGAEGWAALSEVIRAVPAGIPVVLDAKRGDIA 90 (453)
T ss_dssp CEEEEECCCCSSHHHHHHHHHHHHHHH-GGG--CSEEEEBHHHH--HTTHHHHHHHHHHHHHTSCTTSCBEEEEEECCCH
T ss_pred CEEEEeCCCcccccHHHHHHHHHHHHh-CCc--CcEEEEcHHHH--HhcCHHHHHHHHHHHHhhcCCCeEEEEeecCChH
Confidence 4456677776 45455555543 333 23222 1222 346999999998732 478889999999977
Q ss_pred Hh----HHHHH-hcCCCeEEEeccCCCCCHHHHHHHHhh
Q psy11600 78 QW----IEPMA-DANVDQYTFHVEPVDNVPQVIRQIKEA 111 (277)
Q Consensus 78 ~~----i~~l~-~ag~d~i~~H~e~~d~g~~~i~~i~~~ 111 (277)
+. .+.+. +.|+|.+|+|. -+|.+.++...+.
T Consensus 91 nT~~~~a~~~~~~lg~d~vTvh~---~~G~~~l~~~~~~ 126 (453)
T 3qw4_B 91 DTADAYATSAFKHLNAHAITASP---YMGSDSLQPFMRY 126 (453)
T ss_dssp HHHHHHHHHHHTTSCCSEEEECS---TTCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcc---cCCHHHHHHHHHh
Confidence 64 44444 37999999995 4577778776554
No 397
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=62.21 E-value=78 Score=28.17 Aligned_cols=69 Identities=12% Similarity=0.045 Sum_probs=42.5
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN 100 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~ 100 (277)
-.+.+.|++.|+|++ |--|+--.- +.+..+.+...+.||-+. +.|+++-++.. +.|+++|.-..|+.+|
T Consensus 80 ~~EAqilea~GaD~I--Desevltpa------d~~~~I~k~~f~vpfv~~--~~~l~EAlrri-~eGA~mIrTtge~gtg 148 (291)
T 3o07_A 80 FVEAQIIEALEVDYI--DESEVLTPA------DWTHHIEKDKFKVPFVCG--AKDLGEALRRI-NEGAAMIRTKGEAGTG 148 (291)
T ss_dssp HHHHHHHHHTTCSEE--EEETTSCCS------CSSCCCCGGGCSSCEEEE--ESSHHHHHHHH-HHTCSEEEECCCTTSC
T ss_pred HHHHHHHHHcCCCEE--ecccCCCHH------HHHHHhhhhcCCCcEEee--CCCHHHHHHHH-HCCCCEEEecCcCCCc
Confidence 468889999999994 666532211 122233332234455443 35777777665 4699999887776555
No 398
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=62.00 E-value=9.7 Score=34.38 Aligned_cols=74 Identities=18% Similarity=0.245 Sum_probs=52.8
Q ss_pred ccCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCC---CeeeeeeeccCcHHhHH--HHHhc
Q psy11600 14 NSDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPK---AFFETHMMVQNPQQWIE--PMADA 86 (277)
Q Consensus 14 ~~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~---~~~d~Hlmv~~p~~~i~--~l~~a 86 (277)
..|+..+.+.++.+.+.|++. +=+-| |...|+-. .+.++.+++.+|+ +++.+|.=-..-..... ...++
T Consensus 147 ~~~~~~~~~~~~~~~~~G~~~--i~l~DT~G~~~P~~v--~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~a 222 (325)
T 3eeg_A 147 RADQAFLARMVEAVIEAGADV--VNIPDTTGYMLPWQY--GERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQN 222 (325)
T ss_dssp GSCHHHHHHHHHHHHHHTCSE--EECCBSSSCCCHHHH--HHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCE--EEecCccCCcCHHHH--HHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHh
Confidence 456667778888999999998 77788 55555522 3678889988886 88999986654333322 23457
Q ss_pred CCCeE
Q psy11600 87 NVDQY 91 (277)
Q Consensus 87 g~d~i 91 (277)
|++++
T Consensus 223 Ga~~v 227 (325)
T 3eeg_A 223 GARQV 227 (325)
T ss_dssp TCCEE
T ss_pred CCCEE
Confidence 99987
No 399
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=61.99 E-value=39 Score=24.52 Aligned_cols=79 Identities=6% Similarity=0.014 Sum_probs=47.7
Q ss_pred ccCcHHhHHHHHhcC-CCeEEEeccCCC-CCHHHHHHHHhh-CC-Ccccc-----hhhhhHHHHhcCCCeEEeecCCCCC
Q psy11600 73 VQNPQQWIEPMADAN-VDQYTFHVEPVD-NVPQVIRQIKEA-GM-KVGQV-----LQDWIEPMADANVDQYTFHVEPVDN 143 (277)
Q Consensus 73 v~~p~~~i~~l~~ag-~d~i~~H~e~~d-~g~~~i~~i~~~-~~-~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~ 143 (277)
+.+..+.+..+.+.. .|.+.+.++..+ .|.++++.+|+. .. .++-+ .........++|++.+-.-.- +
T Consensus 37 ~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~---~ 113 (136)
T 3hdv_A 37 ADGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPV---D 113 (136)
T ss_dssp ESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSC---C
T ss_pred eCCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCC---C
Confidence 445555566665555 666655555332 277888888876 22 23222 244566777889886666554 5
Q ss_pred hHHHHHHHHHh
Q psy11600 144 VPQVIRQIKEA 154 (277)
Q Consensus 144 ~~~~~~~I~~~ 154 (277)
...+.+.+++.
T Consensus 114 ~~~l~~~i~~~ 124 (136)
T 3hdv_A 114 LGKLLELVNKE 124 (136)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67777777764
No 400
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=61.97 E-value=7.4 Score=34.18 Aligned_cols=171 Identities=15% Similarity=0.124 Sum_probs=95.3
Q ss_pred eeccCcHHhHHHHHhcC--C-CeEEEeccC-CCCCHHHHHHHHhhCCC------cccch---hhhhHHHHhcCCCeEEee
Q psy11600 71 MMVQNPQQWIEPMADAN--V-DQYTFHVEP-VDNVPQVIRQIKEAGMK------VGQVL---QDWIEPMADANVDQYTFH 137 (277)
Q Consensus 71 lmv~~p~~~i~~l~~ag--~-d~i~~H~e~-~d~g~~~i~~i~~~~~~------~~d~p---~~~i~~~~~~g~d~it~H 137 (277)
|=+.+.++.++.+.+.+ + +++=++.+. ...|+..++.+++.... .+|.| ..+++.+.++|+|++|+|
T Consensus 11 LD~~~~~~al~l~~~l~~~v~~~~KvG~~l~~~~G~~~v~~Lk~~g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh 90 (259)
T 3tfx_A 11 LDLDNEEQLNKILSKLGDPHDVFVKVGMELFYNAGIDVIKKLTQQGYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVH 90 (259)
T ss_dssp CCCSCHHHHHHHHHTTCCGGGCEEEECHHHHHHHCHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEE
T ss_pred eCCCCHHHHHHHHHHhCcccceEEEeCHHHHHhcCHHHHHHHHHCCCcEEEEecccccchHHHHHHHHHHhcCCCEEEEc
Confidence 33445666565555554 4 566556554 24599999999987643 23556 567889999999999999
Q ss_pred cCCCC-ChHHHHHHHHHh---CC-c-cceeeCCCCCHH----------------hHHHHH---hhcCceEEEEecCCCCC
Q psy11600 138 VEPVD-NVPQVIRQIKEA---GM-K-VGLAIKPKTPVD----------------VIAEYI---ESADLVLIMTVEPGFGG 192 (277)
Q Consensus 138 ~E~~~-~~~~~~~~I~~~---g~-~-~g~~i~p~t~~~----------------~i~~~i---~~~d~vl~mav~Pgt~g 192 (277)
.-++. .+....+..++. |. + .=+++..=|+.+ .+..+. ...+. -++...|
T Consensus 91 ~~~G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~-dGvV~s~---- 165 (259)
T 3tfx_A 91 ALGGSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGA-DGVICSP---- 165 (259)
T ss_dssp GGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTC-CEEECCG----
T ss_pred CCCCHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCC-CEEEECH----
Confidence 74111 112222333321 21 0 112222222221 111221 22221 1121122
Q ss_pred chhhhhhhhhHHHHHhhCCCccEEEeCCCCcC-----------cHHHHHHccCCC---CCcccc-cCHHHHHHHHHh
Q psy11600 193 QKFMQDMMPKVKWLRENYPTLNIEVDGGVGPN-----------TIDECAKCLTGF---GGQKFM-QDMMPKVKWLRE 254 (277)
Q Consensus 193 q~~~~~~l~kI~~l~~~~~~~~i~vdGgV~~~-----------tv~~~~~~gpg~---ggq~F~-~~~~~kI~~l~~ 254 (277)
..++.+++..+.--+.|-+||... |..++.++|+++ |+..|. ++..+.++++++
T Consensus 166 --------~e~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~ 234 (259)
T 3tfx_A 166 --------LEVKKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKK 234 (259)
T ss_dssp --------GGHHHHHHHHCSSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred --------HHHHHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 135556654433225577998875 788999999997 778887 467777777775
No 401
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=61.68 E-value=29 Score=32.66 Aligned_cols=108 Identities=12% Similarity=0.209 Sum_probs=59.0
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCC-CcccchhhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHH
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGM-KVGQVLQDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKE 153 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~-~~~d~p~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~ 153 (277)
||.++++.+.+||+.++.+=..-.||-- +=. .+.|. ...+.|- +-. -+.++.+.+|+
T Consensus 79 Dp~~Wa~~~k~AGakyvvlTaKHHDGF~-lwp--Sk~t~~n~~~~~~----------------krD---lv~el~~A~rk 136 (450)
T 2wvv_A 79 DAKKWAKMAKEMGTKYVKITTKHHEGFC-LWP--SKYTKYTVANTPY----------------KRD---ILGELVKAYND 136 (450)
T ss_dssp CHHHHHHHHHHHTCSEEEEEEECTTCCB-SSC--CTTCSCBGGGSTT----------------CSC---HHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCcEEEEEEeecCCcc-ccC--CCCCCCccccCCC----------------CCC---hHHHHHHHHHH
Confidence 7899999999999999866443334300 000 00010 0001110 000 12355666777
Q ss_pred hCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCC-----------CchhhhhhhhhHHHHHhhCCC-ccEEEeCCC
Q psy11600 154 AGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFG-----------GQKFMQDMMPKVKWLRENYPT-LNIEVDGGV 221 (277)
Q Consensus 154 ~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~-----------gq~~~~~~l~kI~~l~~~~~~-~~i~vdGgV 221 (277)
.|++.|+-..+-.-- +|.+. -+.|.+.++..+.+|...+.+ -.++.||+-
T Consensus 137 ~Glk~GlY~S~~dw~------------------~p~y~~~~~~~~~~~~~~~y~~~~~~Ql~ELlt~YG~~d~lWfDg~~ 198 (450)
T 2wvv_A 137 EGIDVHFYFSVMDWS------------------NPDYRYDIKSKEDSIAFSRFLEFTDNQLKELATRYPTVKDFWFDGTW 198 (450)
T ss_dssp TTCEEEEEEESCCTT------------------CTTCCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred cCCeEEEEecHHHhc------------------CCcccccccccccccchHHHHHHHHHHHHHHHHcCCCcCEEEEcCCC
Confidence 787777776653110 23322 146777788888888766634 467789876
Q ss_pred C
Q psy11600 222 G 222 (277)
Q Consensus 222 ~ 222 (277)
.
T Consensus 199 ~ 199 (450)
T 2wvv_A 199 D 199 (450)
T ss_dssp S
T ss_pred C
Confidence 4
No 402
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=61.51 E-value=79 Score=27.25 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=25.7
Q ss_pred CceEeeeccccCcc----cHHHHHHHHHHcCCCEEEEecc
Q psy11600 5 QCMIGPSILNSDLS----NLHSESQNLLDSGADYLHLDVM 40 (277)
Q Consensus 5 ~~~~~~s~~~~d~~----~l~~~~~~l~~~~~~~~h~Dim 40 (277)
+.+|+-++++.-.. .+.+.++.+.+.|.+. +.+.
T Consensus 12 ~~~~g~~~~s~~~~~~~~~~~~~l~~~a~~G~~~--VEl~ 49 (303)
T 3l23_A 12 GKEIGLQIYSLSQELYKGDVAANLRKVKDMGYSK--LELA 49 (303)
T ss_dssp CCCCEEEGGGGGGGGGSSCHHHHHHHHHHTTCCE--EEEC
T ss_pred CCceEEEEEEchhhhccCCHHHHHHHHHHcCCCE--EEec
Confidence 45677777766543 7999999999999999 5544
No 403
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=61.35 E-value=73 Score=26.76 Aligned_cols=88 Identities=8% Similarity=-0.091 Sum_probs=50.6
Q ss_pred ceEeeeccccCc--ccHHHHHHHHHHcCCCEEEEeccccccccCC-CCCHHHHHHHHhcC--CCCeeeeeeec-c--C--
Q psy11600 6 CMIGPSILNSDL--SNLHSESQNLLDSGADYLHLDVMDGTFVPNL-TFGHPVVKCLRNKI--PKAFFETHMMV-Q--N-- 75 (277)
Q Consensus 6 ~~~~~s~~~~d~--~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~-~~g~~~v~~l~~~~--~~~~~d~Hlmv-~--~-- 75 (277)
++|+-|.++... ..+++.++.+.+.|.+. +.+.- .+.+++ .+.+..++++|+.. .++.+.++--. . .
T Consensus 1 Mklg~~~~~~~~~~~~~~~~l~~~~~~G~~~--vEl~~-~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~ 77 (286)
T 3dx5_A 1 MKYSLCTISFRHQLISFTDIVQFAYENGFEG--IELWG-THAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSA 77 (286)
T ss_dssp CEEEEEGGGGTTSCCCHHHHHHHHHHTTCCE--EEEEH-HHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTS
T ss_pred CeEEEEeeeccCCCCCHHHHHHHHHHhCCCE--EEEcc-cccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCch
Confidence 357777777755 78999999999999999 44432 111111 12334455555432 35555554211 1 1
Q ss_pred --------cHHhHHHHHhcCCCeEEEecc
Q psy11600 76 --------PQQWIEPMADANVDQYTFHVE 96 (277)
Q Consensus 76 --------p~~~i~~l~~ag~d~i~~H~e 96 (277)
..+.++...+.|+.++.+|.-
T Consensus 78 ~~~~~~~~~~~~i~~A~~lG~~~v~~~~g 106 (286)
T 3dx5_A 78 DFEKTIEKCEQLAILANWFKTNKIRTFAG 106 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECSC
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 112455556678888877754
No 404
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=61.29 E-value=38 Score=30.46 Aligned_cols=146 Identities=12% Similarity=0.198 Sum_probs=82.1
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcHH----hHHHHHhcCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQQ----WIEPMADANV 88 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~~----~i~~l~~ag~ 88 (277)
.+...+.++.+++.+.|.+.+-+.+- + ++.+..+.++.+|+.+ +++++-+..--. ++.+ +++.+.+.|+
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~iKik~g--~---~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i 214 (369)
T 2p8b_A 140 ADPENMAEEAASMIQKGYQSFKMKVG--T---NVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNI 214 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECC--S---CHHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCC
T ss_pred CChHHHHHHHHHHHHcCcCEEEEEeC--C---CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 35566777778888889888554432 1 2345568899999876 455543332111 2333 3444556688
Q ss_pred CeEEEeccCC-CCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCcc
Q psy11600 89 DQYTFHVEPV-DNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKV 158 (277)
Q Consensus 89 d~i~~H~e~~-d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~ 158 (277)
+|+. +.. ..-....+.+++.+..|+-. +.++.+.+.+-.+|.+.+-+--.+.+. ++.+..++.|+..
T Consensus 215 ~~iE---qP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~ 291 (369)
T 2p8b_A 215 DWIE---QPVIADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIEC 291 (369)
T ss_dssp SCEE---CCBCTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred cEEE---CCCCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcE
Confidence 8873 222 12456678888887666522 666666666667999988542100122 3444455555444
Q ss_pred ceeeCCCCCH
Q psy11600 159 GLAIKPKTPV 168 (277)
Q Consensus 159 g~~i~p~t~~ 168 (277)
-.+...++++
T Consensus 292 ~~~~~~es~i 301 (369)
T 2p8b_A 292 QVGSMVESSV 301 (369)
T ss_dssp EECCSSCCHH
T ss_pred EecCCCccHH
Confidence 3333333444
No 405
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=61.24 E-value=44 Score=24.90 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=52.5
Q ss_pred eccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCC-cccc-----hhhhhHHHHhcCCCeEEeecCCCCCh
Q psy11600 72 MVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMK-VGQV-----LQDWIEPMADANVDQYTFHVEPVDNV 144 (277)
Q Consensus 72 mv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~-~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~ 144 (277)
.+.+..+.++.+.+...|.+.+.++..+. |..+++.+|+.... ++-+ ...+.....++|++.+-.-.- +.
T Consensus 51 ~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~---~~ 127 (150)
T 4e7p_A 51 QAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKER---SI 127 (150)
T ss_dssp EESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTS---CH
T ss_pred EECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCC---CH
Confidence 35567777777777778888777664333 78899999886532 3322 344667778889886655544 56
Q ss_pred HHHHHHHHHh
Q psy11600 145 PQVIRQIKEA 154 (277)
Q Consensus 145 ~~~~~~I~~~ 154 (277)
..+.+.|+..
T Consensus 128 ~~l~~~i~~~ 137 (150)
T 4e7p_A 128 ADLMQTLHTV 137 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6677666653
No 406
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=61.18 E-value=44 Score=24.22 Aligned_cols=84 Identities=8% Similarity=-0.024 Sum_probs=52.2
Q ss_pred eeeeeeccCcHHhHHHHHhcCCCeEEEeccCC-C-CCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecC
Q psy11600 67 FETHMMVQNPQQWIEPMADANVDQYTFHVEPV-D-NVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~-d-~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E 139 (277)
+.+...+.+..+.++.+.+...|.+.+.++.. + .|.++++.+|+....++-+ .........++|++.+..-.-
T Consensus 34 ~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~ 113 (140)
T 3cg0_A 34 YDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQDVETFQRAKRVNPFGYLAKPV 113 (140)
T ss_dssp CEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCCHHHHHHHHTTCCSEEEEESC
T ss_pred CeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhcCCCEEEeCCC
Confidence 34433466777777777777788887776653 2 3778888888763223322 244556677889876655544
Q ss_pred CCCChHHHHHHHHH
Q psy11600 140 PVDNVPQVIRQIKE 153 (277)
Q Consensus 140 ~~~~~~~~~~~I~~ 153 (277)
+...+.+.++.
T Consensus 114 ---~~~~l~~~i~~ 124 (140)
T 3cg0_A 114 ---AADTLHRSIEM 124 (140)
T ss_dssp ---CHHHHHHHHHH
T ss_pred ---CHHHHHHHHHH
Confidence 55666666654
No 407
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=61.16 E-value=43 Score=24.06 Aligned_cols=80 Identities=11% Similarity=0.089 Sum_probs=50.1
Q ss_pred eccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCC--C-cccc----hhhhhHHHHhcCCCeEEeecCCCCC
Q psy11600 72 MVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGM--K-VGQV----LQDWIEPMADANVDQYTFHVEPVDN 143 (277)
Q Consensus 72 mv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~--~-~~d~----p~~~i~~~~~~g~d~it~H~E~~~~ 143 (277)
.+.+..+.++.+.+...|.+.+.+...+ .|.++++++|+... . ++-+ ....+....++|++-+-.-+- +
T Consensus 35 ~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~---~ 111 (132)
T 3lte_A 35 IAHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEKPF---D 111 (132)
T ss_dssp EESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECSSC---C
T ss_pred EeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhCCC---C
Confidence 4556666777777777787766665433 27788888887642 2 2211 233566777888876555444 5
Q ss_pred hHHHHHHHHHh
Q psy11600 144 VPQVIRQIKEA 154 (277)
Q Consensus 144 ~~~~~~~I~~~ 154 (277)
...+.+.|+..
T Consensus 112 ~~~l~~~i~~~ 122 (132)
T 3lte_A 112 NDALLDRIHDL 122 (132)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66777777653
No 408
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=61.14 E-value=37 Score=31.54 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEec
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHV 95 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~ 95 (277)
.+.++.+.+.|+|.+=+|.--|+ |. .-++.++++|+.+ ++++-+. -+.. .+..+.+.++|+|.|.+..
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~--~~--~~~e~I~~ik~~~-~i~Vi~g-~V~t-~e~A~~a~~aGAD~I~vG~ 213 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH--SL--NIIRTLKEIKSKM-NIDVIVG-NVVT-EEATKELIENGADGIKVGI 213 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS--BH--HHHHHHHHHHTTC-CCEEEEE-EECS-HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC--cc--cHHHHHHHHHhcC-CCeEEEe-ecCC-HHHHHHHHHcCCCEEEEeC
Confidence 57888999999999755543321 10 1147788898865 6666653 2233 5567889999999998854
No 409
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=61.05 E-value=16 Score=32.60 Aligned_cols=60 Identities=13% Similarity=-0.033 Sum_probs=44.7
Q ss_pred CcHHhHHHHHhcCCCeEEEe----ccCC--CC-----CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeE
Q psy11600 75 NPQQWIEPMADANVDQYTFH----VEPV--DN-----VPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQY 134 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H----~e~~--d~-----g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~i 134 (277)
+|.++.+.+.++||+-++|- .|+. .| .+..|+++|+....|+.. -.+.++.+.++|||.|
T Consensus 29 ~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 29 KNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp SSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred CcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCCCEE
Confidence 55678999999999999887 3442 22 699999999998877754 1445566678999999
No 410
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=61.03 E-value=89 Score=27.70 Aligned_cols=152 Identities=11% Similarity=0.132 Sum_probs=93.5
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC-----cHHhHHHHHhcCCCeE
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN-----PQQWIEPMADANVDQY 91 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~-----p~~~i~~l~~ag~d~i 91 (277)
..++.+.++.|...+.|+ ++|-||.--..-.-...+.+.++ . .+++.-+||-..+ ..+.+..+.++|++.+
T Consensus 28 ~~~l~~~~~~L~~~~pd~--vsVT~~~~g~~r~~t~~~a~~i~-~-~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~ni 103 (310)
T 3apt_A 28 EEALFRTLEELKAFRPAF--VSITYGAMGSTRERSVAWAQRIQ-S-LGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENL 103 (310)
T ss_dssp HHHHHHHHHHHGGGCCSE--EEECCCSTTCSHHHHHHHHHHHH-H-TTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHhcCCCCE--EEEecCCCCCcchhHHHHHHHHH-H-hCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEE
Confidence 446778888998888899 88988654321111335566677 4 5899999999886 3345677778898855
Q ss_pred E-EeccCC-------------CCCHHHHHHHHhh-CC-Ccccc---h------------hhhhHHHHhcCCCeEEeec--
Q psy11600 92 T-FHVEPV-------------DNVPQVIRQIKEA-GM-KVGQV---L------------QDWIEPMADANVDQYTFHV-- 138 (277)
Q Consensus 92 ~-~H~e~~-------------d~g~~~i~~i~~~-~~-~~~d~---p------------~~~i~~~~~~g~d~it~H~-- 138 (277)
- +=-|.. +...++|+.+|+. .. ..+-+ | .++++.=.++|||++.=++
T Consensus 104 LaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAdf~iTQ~ff 183 (310)
T 3apt_A 104 LALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGLDFAITQLFF 183 (310)
T ss_dssp EEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHCSEEEECCCS
T ss_pred EEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEecccC
Confidence 2 222321 1267888988887 32 22211 3 2345555789999766443
Q ss_pred --CCCCChHHHHHHHHHhC--CccceeeCCCCCHHhHHHHH
Q psy11600 139 --EPVDNVPQVIRQIKEAG--MKVGLAIKPKTPVDVIAEYI 175 (277)
Q Consensus 139 --E~~~~~~~~~~~I~~~g--~~~g~~i~p~t~~~~i~~~i 175 (277)
| ...+..+.+++.| ...=.|+.|-++...+..+.
T Consensus 184 D~~---~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~ 221 (310)
T 3apt_A 184 NNA---HYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFT 221 (310)
T ss_dssp CHH---HHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHH
T ss_pred CHH---HHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHH
Confidence 2 2334555555555 34456777777766555553
No 411
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=60.94 E-value=49 Score=24.63 Aligned_cols=80 Identities=5% Similarity=0.013 Sum_probs=53.1
Q ss_pred eccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCC-cccc-----hhhhhHHHHhcCCCeEEeecCCCCCh
Q psy11600 72 MVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMK-VGQV-----LQDWIEPMADANVDQYTFHVEPVDNV 144 (277)
Q Consensus 72 mv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~-~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~ 144 (277)
.+.+..+.++.+.+...|.+.+.+...+. |.++++.+|+.... ++-+ ....+....++|++.+-.-.- +.
T Consensus 46 ~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~---~~ 122 (152)
T 3eul_A 46 EADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDS---TR 122 (152)
T ss_dssp EESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTC---CH
T ss_pred EeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCC---CH
Confidence 45677777887877788888777664332 78889999887532 3322 344566777889886666554 56
Q ss_pred HHHHHHHHHh
Q psy11600 145 PQVIRQIKEA 154 (277)
Q Consensus 145 ~~~~~~I~~~ 154 (277)
..+.+.++..
T Consensus 123 ~~l~~~i~~~ 132 (152)
T 3eul_A 123 TEIVKAVLDC 132 (152)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666653
No 412
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=60.87 E-value=75 Score=27.14 Aligned_cols=90 Identities=13% Similarity=0.151 Sum_probs=62.5
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeec-----cCcHHhHHHHHhcCCCeE
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMV-----QNPQQWIEPMADANVDQY 91 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv-----~~p~~~i~~l~~ag~d~i 91 (277)
+.-+.++++.+++.|+|-+=+=+.+ ++=.+..+.+++|.+..-.+++..|.-. .||.+.++.+.+.|++.|
T Consensus 75 ~~~M~~Di~~~~~~GadGvV~G~Lt----~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rI 150 (224)
T 2bdq_A 75 LRIMEEDILRAVELESDALVLGILT----SNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRI 150 (224)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBC----TTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeEC----CCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEE
Confidence 3456677888999999985554444 4445677888888765457889999875 788889999999999998
Q ss_pred EEeccCC----CCCHHHHHHHHh
Q psy11600 92 TFHVEPV----DNVPQVIRQIKE 110 (277)
Q Consensus 92 ~~H~e~~----d~g~~~i~~i~~ 110 (277)
-=+--.. ..|...++++-+
T Consensus 151 LTSG~~~~~~a~~g~~~L~~Lv~ 173 (224)
T 2bdq_A 151 LLHGSSNGEPIIENIKHIKALVE 173 (224)
T ss_dssp EECSCSSCCCGGGGHHHHHHHHH
T ss_pred ECCCCCCCCcHHHHHHHHHHHHH
Confidence 4442211 115555555543
No 413
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=60.67 E-value=33 Score=30.40 Aligned_cols=84 Identities=13% Similarity=0.025 Sum_probs=55.6
Q ss_pred hHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhC-CCcccc--------hhhhhHHHHhcCCCeEEeecCC-
Q psy11600 79 WIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAG-MKVGQV--------LQDWIEPMADANVDQYTFHVEP- 140 (277)
Q Consensus 79 ~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~-~~~~d~--------p~~~i~~~~~~g~d~it~H~E~- 140 (277)
....+.++||..+|+|.---+| --++++.||+.+ ..++.+ +++.+..+ +..+|+.|+-...
T Consensus 39 ~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~-~~~Pe~aSl~~Gs~ 117 (284)
T 3chv_A 39 STQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML-PLKPDMASLSVGSN 117 (284)
T ss_dssp HHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG-GGCCSEEEECCSCE
T ss_pred HHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh-hcCCCEEEecCccc
Confidence 3455678899999999765455 357888899876 333322 55666666 6788888876520
Q ss_pred ----------CCChHHHHHHHHHhCCccceeeC
Q psy11600 141 ----------VDNVPQVIRQIKEAGMKVGLAIK 163 (277)
Q Consensus 141 ----------~~~~~~~~~~I~~~g~~~g~~i~ 163 (277)
.....+..+.+++.|.+..+.+-
T Consensus 118 Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~f 150 (284)
T 3chv_A 118 NFPSRVYENPPDLVDWLAAQMRSYRVTPEIEAF 150 (284)
T ss_dssp ECSSSEECCCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred ccCCccccCCHHHHHHHHHHHHHcCCEEEEEEE
Confidence 00134667777888877777664
No 414
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=60.66 E-value=73 Score=26.57 Aligned_cols=85 Identities=7% Similarity=-0.039 Sum_probs=51.3
Q ss_pred eEeeeccccCc-----ccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeee----e-----
Q psy11600 7 MIGPSILNSDL-----SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHM----M----- 72 (277)
Q Consensus 7 ~~~~s~~~~d~-----~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hl----m----- 72 (277)
+|+-|..+... ..+.+.++.+.+.|.+. +.+.-..+.| .. ....++++.+. .++.+..|- .
T Consensus 7 kl~~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~--vEl~~~~~~~-~~-~~~~~~~~l~~-~gl~i~~~~~~~~~~~~~~ 81 (264)
T 1yx1_A 7 PVSISLSSYGADLVRSRGQASFLPLLAMAGAQR--VELREELFAG-PP-DTEALTAAIQL-QGLECVFSSPLELWREDGQ 81 (264)
T ss_dssp CEEEEGGGGCHHHHHHHCGGGGHHHHHHHTCSE--EEEEGGGCSS-CC-CHHHHHHHHHH-TTCEEEEEEEEEEECTTSS
T ss_pred ceeeechhhcchhccCcCHHHHHHHHHHcCCCE--EEEEHHhcCC-CH-HHHHHHHHHHH-cCCEEEEecchhhcCCchh
Confidence 35555555433 35678899999999999 4444322332 12 45555555444 467666542 1
Q ss_pred c-cCcHHhHHHHHhcCCCeEEEecc
Q psy11600 73 V-QNPQQWIEPMADANVDQYTFHVE 96 (277)
Q Consensus 73 v-~~p~~~i~~l~~ag~d~i~~H~e 96 (277)
+ ....+.++...+.|+.++.+|..
T Consensus 82 ~~~~~~~~i~~A~~lGa~~v~~~~g 106 (264)
T 1yx1_A 82 LNPELEPTLRRAEACGAGWLKVSLG 106 (264)
T ss_dssp BCTTHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecC
Confidence 1 34455677777788888888854
No 415
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=60.50 E-value=47 Score=24.30 Aligned_cols=79 Identities=9% Similarity=-0.010 Sum_probs=48.5
Q ss_pred eccCcHHhHHHHH--hcCCCeEEEeccCCCC-CHHHHHHHHhhCC-Ccccc-----hhhhhHHHHhcCCCeEEeecCCCC
Q psy11600 72 MVQNPQQWIEPMA--DANVDQYTFHVEPVDN-VPQVIRQIKEAGM-KVGQV-----LQDWIEPMADANVDQYTFHVEPVD 142 (277)
Q Consensus 72 mv~~p~~~i~~l~--~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~-~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~ 142 (277)
.+.+..+.++.+. +...|.+.+.++..+. |..+++.+|+... .++-+ ....+....++|++.+-.-.-
T Consensus 32 ~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~--- 108 (143)
T 3jte_A 32 TASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPV--- 108 (143)
T ss_dssp EESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSC---
T ss_pred EeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCC---
Confidence 4556666676666 4467877666654332 7788888888653 23322 244566777889876555443
Q ss_pred ChHHHHHHHHH
Q psy11600 143 NVPQVIRQIKE 153 (277)
Q Consensus 143 ~~~~~~~~I~~ 153 (277)
+...+...++.
T Consensus 109 ~~~~l~~~l~~ 119 (143)
T 3jte_A 109 TAQDLSIAINN 119 (143)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 45666666654
No 416
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=60.23 E-value=45 Score=33.85 Aligned_cols=74 Identities=14% Similarity=0.214 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC------CCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 20 LHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI------PKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 20 l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~------~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
+.+.+++|.+.|++|+++| +-.+|-+ ...+..+.+++.| ++..+.+.-...++.+.++.+.+.+++.+
T Consensus 222 Y~~~l~~L~~~G~~wVQiD--EP~Lv~d--l~~~~~~~~~~aY~~L~~~~~~kill~TYFg~~~~~l~~l~~lpV~gl-- 295 (789)
T 3ppg_A 222 YKELLQKLKEAGAEQVQID--EPVLVLD--LPEAVQSKFKEAYDALVGADVPELILTTYFGDVRPNLKAIENLPVAGF-- 295 (789)
T ss_dssp HHHHHHHHHHHTCCEEEEE--CGGGGSC--CCHHHHTHHHHHHHHHCSTTSCEEEEECCSSCCGGGHHHHTTCCCSEE--
T ss_pred HHHHHHHHHHcCCCEEEee--CCeeecC--CCHHHHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHcCCCcEE--
Confidence 4677888999999998887 4334422 3344444443332 23445555556778788899999999998
Q ss_pred eccCCC
Q psy11600 94 HVEPVD 99 (277)
Q Consensus 94 H~e~~d 99 (277)
|+|...
T Consensus 296 ~lDlv~ 301 (789)
T 3ppg_A 296 HFDFVR 301 (789)
T ss_dssp EEETTT
T ss_pred EEEccC
Confidence 766544
No 417
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=60.12 E-value=49 Score=30.67 Aligned_cols=146 Identities=12% Similarity=0.114 Sum_probs=86.7
Q ss_pred cCc-ccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHhcCC
Q psy11600 15 SDL-SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMADANV 88 (277)
Q Consensus 15 ~d~-~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ag~ 88 (277)
.+. ..+.++.+++.+.|.+.+-+.+-+ ++.+..+.++++|+.+ ++.++-+..--. ++. ++++.+.+.|+
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-----~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i 257 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD-----AARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQA 257 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS-----CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC-----CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 455 667777778778898886654432 3455678899999875 454443322111 233 35677788899
Q ss_pred CeEEEeccCCC-CCHHHHHHHHhhCC-Ccccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCc
Q psy11600 89 DQYTFHVEPVD-NVPQVIRQIKEAGM-KVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMK 157 (277)
Q Consensus 89 d~i~~H~e~~d-~g~~~i~~i~~~~~-~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~ 157 (277)
+|+- +... ......+.+++.+. .|+-. +.++-+.+.+-.+|.+.+-+--.+.+. ++.+..++.|+.
T Consensus 258 ~~iE---qP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A~~~gi~ 334 (428)
T 3bjs_A 258 GWLE---EPFACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASAYRIP 334 (428)
T ss_dssp SCEE---CCSCTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHHTTCC
T ss_pred CEEE---CCCCccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCe
Confidence 9883 2221 24566778887766 55522 454444444445888888664211233 455556667766
Q ss_pred cceeeCCCCCHH
Q psy11600 158 VGLAIKPKTPVD 169 (277)
Q Consensus 158 ~g~~i~p~t~~~ 169 (277)
.-.+ ..++++.
T Consensus 335 ~~~~-~~es~i~ 345 (428)
T 3bjs_A 335 INAH-SSATGLN 345 (428)
T ss_dssp BCCB-CCSSHHH
T ss_pred EEec-CCCcHHH
Confidence 6666 5566554
No 418
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=60.05 E-value=97 Score=27.80 Aligned_cols=142 Identities=11% Similarity=0.082 Sum_probs=83.6
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCee--eeeeeccCc--HHhHHHHHhcCCCeE
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFF--ETHMMVQNP--QQWIEPMADANVDQY 91 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~--d~Hlmv~~p--~~~i~~l~~ag~d~i 91 (277)
+...+.++.+++.+.|.+.+-+.+ | | ....+.++++|+.++++++ |+|--. ++ .++++.+.+.|++|+
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~---~--~~d~~~v~avr~a~~~~~l~vDan~~~-~~~~~~~~~~l~~~~i~~i 219 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--K---P--GWDVQPVRATREAFPDIRLTVDANSAY-TLADAGRLRQLDEYDLTYI 219 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--B---T--TBSHHHHHHHHHHCTTSCEEEECTTCC-CGGGHHHHHTTGGGCCSCE
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--C---h--HHHHHHHHHHHHHcCCCeEEEeCCCCC-CHHHHHHHHHHHhCCCcEE
Confidence 555566777777788888866655 2 3 3566889999988766444 433111 23 334555566788888
Q ss_pred EEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCcccee
Q psy11600 92 TFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVGLA 161 (277)
Q Consensus 92 ~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g~~ 161 (277)
- |+.. ......+.+++.+..|+-. +.++-+.+..-.+|.+-+-+--.+.+. ++.+..++.|+..=++
T Consensus 220 E---qP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 296 (375)
T 1r0m_A 220 E---QPLAWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCG 296 (375)
T ss_dssp E---CCSCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred E---CCCCcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEec
Confidence 3 3321 2345677888877665532 565555555566899988765222232 3444555666554333
Q ss_pred eCCCCCH
Q psy11600 162 IKPKTPV 168 (277)
Q Consensus 162 i~p~t~~ 168 (277)
-..++++
T Consensus 297 ~~~es~i 303 (375)
T 1r0m_A 297 GMLESGI 303 (375)
T ss_dssp CCCCCHH
T ss_pred CccccHH
Confidence 3445554
No 419
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=60.03 E-value=9.5 Score=34.00 Aligned_cols=78 Identities=12% Similarity=0.008 Sum_probs=37.5
Q ss_pred HHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCC--------Ccccc----hh
Q psy11600 53 PVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGM--------KVGQV----LQ 120 (277)
Q Consensus 53 ~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~--------~~~d~----p~ 120 (277)
..+++.|+.+|. ..-+-+-+.+++ ++....++|+|+|- +|. +++..++.+++... .++.+ -.
T Consensus 187 ~ai~~~r~~~~~-~~~i~vev~tle-e~~~A~~aGaD~I~--ld~--~~~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~ 260 (294)
T 3c2e_A 187 NAVKNARAVCGF-AVKIEVECLSED-EATEAIEAGADVIM--LDN--FKGDGLKMCAQSLKNKWNGKKHFLLECSGGLNL 260 (294)
T ss_dssp HHHHHHHHHHCT-TSCEEEECSSSH-HHHHHHHHTCSEEE--CCC-----------------------CCEEEEECCCCC
T ss_pred HHHHHHHHhcCc-CCeEEEecCCHH-HHHHHHHcCCCEEE--ECC--CCHHHHHHHHHHhcccccCCCCeEEEEECCCCH
Confidence 567788877663 122334666774 45566678999994 454 34556666544332 22322 56
Q ss_pred hhhHHHHhcCCCeEEe
Q psy11600 121 DWIEPMADANVDQYTF 136 (277)
Q Consensus 121 ~~i~~~~~~g~d~it~ 136 (277)
+-+..++++|+|.+++
T Consensus 261 ~ni~~~~~~GvD~i~v 276 (294)
T 3c2e_A 261 DNLEEYLCDDIDIYST 276 (294)
T ss_dssp ------CCCSCSEEEC
T ss_pred HHHHHHHHcCCCEEEE
Confidence 7788899999999887
No 420
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=59.89 E-value=10 Score=36.82 Aligned_cols=71 Identities=20% Similarity=0.295 Sum_probs=51.5
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCC-CCeeeeeeeccCcH---HhHHHHHhcCCC
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIP-KAFFETHMMVQNPQ---QWIEPMADANVD 89 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~-~~~~d~Hlmv~~p~---~~i~~l~~ag~d 89 (277)
|+..+-+.++.+.+.|++. +=+-| |...|+-. .+.++.+|+.+| ++++.+|.=-..-. +.+. ..++|++
T Consensus 173 ~~e~~~~~a~~l~~~Gad~--I~L~DT~G~~~P~~v--~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~la-AveAGa~ 247 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADS--IALKDMAALLKPQPA--YDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMK-AIEAGVD 247 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSE--EEEEETTCCCCHHHH--HHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHH-HHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCE--EEeCCCCCCcCHHHH--HHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHH-HHHhCCC
Confidence 5566677888899999998 66666 66666633 367899998877 88999997665432 3333 3568999
Q ss_pred eE
Q psy11600 90 QY 91 (277)
Q Consensus 90 ~i 91 (277)
++
T Consensus 248 ~V 249 (539)
T 1rqb_A 248 VV 249 (539)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 421
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=59.16 E-value=44 Score=24.40 Aligned_cols=83 Identities=12% Similarity=0.139 Sum_probs=49.0
Q ss_pred eeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhC---CCcccc-----hhhhhHHHHhcCCCeEEee
Q psy11600 67 FETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAG---MKVGQV-----LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~---~~~~d~-----p~~~i~~~~~~g~d~it~H 137 (277)
+.+. -+.+..+.++.+.+...|.+.+.+...+. |..+++.+|+.. ..++-+ ....+....++|++.+-.-
T Consensus 27 ~~v~-~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~K 105 (140)
T 3n53_A 27 YLVI-ESKNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTK 105 (140)
T ss_dssp SEEE-EESSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEES
T ss_pred ceEE-EeCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeC
Confidence 4454 45577777777777778888777654332 778888888764 223322 2445556678898766655
Q ss_pred cCCCCChHHHHHHHHH
Q psy11600 138 VEPVDNVPQVIRQIKE 153 (277)
Q Consensus 138 ~E~~~~~~~~~~~I~~ 153 (277)
.- +...+.+.++.
T Consensus 106 P~---~~~~l~~~i~~ 118 (140)
T 3n53_A 106 PF---NRNDLLSRIEI 118 (140)
T ss_dssp SC---CHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHH
Confidence 54 56666666654
No 422
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=59.10 E-value=29 Score=31.22 Aligned_cols=98 Identities=15% Similarity=0.173 Sum_probs=72.3
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccc--cccc--cCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEE
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMD--GTFV--PNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYT 92 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimD--g~fv--p~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~ 92 (277)
+.+-++..+.+++.|+|+|=+=|=- |.|- .+-.+.++.++++++. +++|+..|==.+=|.++++.+.+.|.++
T Consensus 154 yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~-~~~PLVlHGgS~vp~~~~~~~~~~gg~~-- 230 (307)
T 3n9r_A 154 LVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRL-TNIPLVLHGASAIPDNVRKSYLDAGGDL-- 230 (307)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHH-HCSCEEESSCCCCCHHHHHHHHHTTCCC--
T ss_pred CCCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhc-CCCCeEEeCCCCcchHHHHHHHHhcCcc--
Confidence 4577788888888999998877766 6663 1334667899999875 8899999998888999999999999874
Q ss_pred EeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEee
Q psy11600 93 FHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 93 ~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H 137 (277)
+ ++. | +|++-+...+++|+.-|-+-
T Consensus 231 -~-~~~-G-----------------~p~e~i~~ai~~GV~KiNi~ 255 (307)
T 3n9r_A 231 -K-GSK-G-----------------VPFEFLQESVKGGINKVNTD 255 (307)
T ss_dssp -T-TCB-C-----------------CCHHHHHHHHHTTEEEEEEC
T ss_pred -C-CCC-C-----------------CCHHHHHHHHHcCceEEEec
Confidence 2 221 2 25556666667776666663
No 423
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=58.82 E-value=63 Score=29.46 Aligned_cols=121 Identities=13% Similarity=0.181 Sum_probs=73.9
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccc----cc--------cc--cCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH--
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMD----GT--------FV--PNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ-- 77 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimD----g~--------fv--p~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~-- 77 (277)
+...+.++.+++.+.|.+.+=+.+.. |. |. .++.+..+.++++|+.+ +++++-+..--. ++.
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a 231 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDTTSA 231 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 55566677778888899997776531 21 11 12334557888999865 454443332111 333
Q ss_pred -HhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecC
Q psy11600 78 -QWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 78 -~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E 139 (277)
++++.+.+.|++|+- |... ......+.+++.+..|+-. +.++-+.+.+-.+|.+.+-+-
T Consensus 232 ~~~~~~l~~~~i~~iE---~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 298 (407)
T 2o56_A 232 IQFGRMIEELGIFYYE---EPVMPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQPDIC 298 (407)
T ss_dssp HHHHHHHGGGCCSCEE---CSSCSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCTT
T ss_pred HHHHHHHHhcCCCEEe---CCCChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCcc
Confidence 356677778999883 2222 2466788888887666532 555555555556899988765
No 424
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=58.53 E-value=49 Score=23.93 Aligned_cols=85 Identities=8% Similarity=0.030 Sum_probs=54.6
Q ss_pred eeeeeeeccCcHHhHHHHHhcCCCeEEEeccCC-----C-CCHHHHHHHHhhCC-Ccccc-----hhhhhHHHHhcCCCe
Q psy11600 66 FFETHMMVQNPQQWIEPMADANVDQYTFHVEPV-----D-NVPQVIRQIKEAGM-KVGQV-----LQDWIEPMADANVDQ 133 (277)
Q Consensus 66 ~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~-----d-~g~~~i~~i~~~~~-~~~d~-----p~~~i~~~~~~g~d~ 133 (277)
-+.+. .+.+..+.++.+.+...|.+.+.++.. + .|.++++.+|+... .++-+ .........++|++.
T Consensus 27 g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~ 105 (140)
T 2qr3_A 27 FSKVI-TLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASD 105 (140)
T ss_dssp SSEEE-EECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCE
T ss_pred CcEEE-EeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchh
Confidence 34454 456777777777777788887776643 2 37888999988643 23322 244566777889876
Q ss_pred EEeecCCCCChHHHHHHHHHh
Q psy11600 134 YTFHVEPVDNVPQVIRQIKEA 154 (277)
Q Consensus 134 it~H~E~~~~~~~~~~~I~~~ 154 (277)
+..-.- +...+.+.++.+
T Consensus 106 ~l~kp~---~~~~l~~~l~~~ 123 (140)
T 2qr3_A 106 FVVKPW---DNQKLLETLLNA 123 (140)
T ss_dssp EEEESC---CHHHHHHHHHHH
T ss_pred eeeCCC---CHHHHHHHHHHH
Confidence 555544 566677777654
No 425
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=58.40 E-value=45 Score=23.95 Aligned_cols=63 Identities=13% Similarity=0.060 Sum_probs=38.3
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCC-cccc-----hhhhhHHHHhcCCCeEE
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMK-VGQV-----LQDWIEPMADANVDQYT 135 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~-~~d~-----p~~~i~~~~~~g~d~it 135 (277)
+.+..+.++.+.+...|.+.+.++..+ .|.++++.+|+.... ++-+ .........++|++.+.
T Consensus 37 ~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l 106 (130)
T 3eod_A 37 AADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVL 106 (130)
T ss_dssp ESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEE
T ss_pred eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEE
Confidence 567777777777777787766655433 278888888886532 3322 23445566678887443
No 426
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=57.87 E-value=1e+02 Score=27.46 Aligned_cols=119 Identities=8% Similarity=-0.055 Sum_probs=68.8
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCC-------CC-HHHHHHH---Hhc----CCCCeeeeeee---ccCcH
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLT-------FG-HPVVKCL---RNK----IPKAFFETHMM---VQNPQ 77 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~-------~g-~~~v~~l---~~~----~~~~~~d~Hlm---v~~p~ 77 (277)
+..+..+.++++++.|+..+| |-|+.+.+--+ .. .+.++.| +.. -+++.+-+=-= ....+
T Consensus 101 ~~~~v~~~v~~l~~aGaagv~--iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gld 178 (307)
T 3lye_A 101 GPIMVARTVEHYIRSGVAGAH--LEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYE 178 (307)
T ss_dssp SHHHHHHHHHHHHHTTCCEEE--ECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHH
T ss_pred CHHHHHHHHHHHHHcCCeEEE--EcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHH
Confidence 444667788999999999977 56765533211 11 1334444 221 23443322211 11233
Q ss_pred Hh---HHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCC-Cccc--c------hhhhhHHHHhcCCCeEEeecC
Q psy11600 78 QW---IEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGM-KVGQ--V------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 78 ~~---i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~-~~~d--~------p~~~i~~~~~~g~d~it~H~E 139 (277)
+- .+.+.++|+|.+.+|. .. .+..++.+.+.-. .|+. + |.--.++|.+.|+..+++..-
T Consensus 179 eAi~Ra~ay~eAGAD~ifi~~--~~-~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~ 249 (307)
T 3lye_A 179 ECIERLRAARDEGADVGLLEG--FR-SKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFA 249 (307)
T ss_dssp HHHHHHHHHHHTTCSEEEECC--CS-CHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETT
T ss_pred HHHHHHHHHHHCCCCEEEecC--CC-CHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChH
Confidence 33 4556789999996663 22 4566777766532 4442 2 444568999999999999763
No 427
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=57.80 E-value=63 Score=29.37 Aligned_cols=141 Identities=11% Similarity=0.153 Sum_probs=82.6
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ag~d 89 (277)
.+...+.++.+++.+.|.+.+=+.+- +- ...+-.+.++++|+.+ +++++-+..--. ++. ++++.+.+.|++
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g---~~-~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 223 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPM---LD-SLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPY 223 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCC---CS-SHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC---CC-hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCC
Confidence 45666777788888889888554431 11 1234557899999865 454443332111 233 356677778999
Q ss_pred eEEEeccCC-CCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCccc
Q psy11600 90 QYTFHVEPV-DNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVG 159 (277)
Q Consensus 90 ~i~~H~e~~-d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g 159 (277)
|+- +.. ..-....+.+++.+..|+-. +.++.+.+.+-.+|.+.+-+--.+.+. ++.+..++.|+..-
T Consensus 224 ~iE---qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~ 300 (391)
T 2qgy_A 224 WIE---EPVDGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFIS 300 (391)
T ss_dssp EEE---CSSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEEC
T ss_pred eEe---CCCChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEe
Confidence 983 222 12456778888887666522 565555555556899988664222333 34455555555544
Q ss_pred eee
Q psy11600 160 LAI 162 (277)
Q Consensus 160 ~~i 162 (277)
.+.
T Consensus 301 ~~~ 303 (391)
T 2qgy_A 301 PHC 303 (391)
T ss_dssp CBC
T ss_pred ccC
Confidence 443
No 428
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=57.35 E-value=48 Score=24.05 Aligned_cols=79 Identities=9% Similarity=0.038 Sum_probs=49.0
Q ss_pred eccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCC-cccc-----hhhhhHHHHhcCCCeEEeecCCCCCh
Q psy11600 72 MVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMK-VGQV-----LQDWIEPMADANVDQYTFHVEPVDNV 144 (277)
Q Consensus 72 mv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~-~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~ 144 (277)
.+.+..+.++.+.+...|.+.+.++..+. |.++++.+|+.... ++-+ .........++|++.+-.-.- +.
T Consensus 36 ~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~---~~ 112 (137)
T 3hdg_A 36 SAGDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPI---EP 112 (137)
T ss_dssp EESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSC---CH
T ss_pred EECCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeEcCCC---CH
Confidence 34566666777777777877666654332 77888888876532 2221 344666677888886555443 45
Q ss_pred HHHHHHHHH
Q psy11600 145 PQVIRQIKE 153 (277)
Q Consensus 145 ~~~~~~I~~ 153 (277)
..+.+.+++
T Consensus 113 ~~l~~~i~~ 121 (137)
T 3hdg_A 113 GRLMETLED 121 (137)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 566666654
No 429
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=57.34 E-value=84 Score=28.63 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=68.8
Q ss_pred Eeeecccc-----CcccHHHHHHHHHHcCCCEEEEeccccccccCCC---C--CH----HHHHHHHhc------CCCCee
Q psy11600 8 IGPSILNS-----DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLT---F--GH----PVVKCLRNK------IPKAFF 67 (277)
Q Consensus 8 ~~~s~~~~-----d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~---~--g~----~~v~~l~~~------~~~~~~ 67 (277)
+..||-.- ++.++.+.++.+.+ ++|++=+.+ -+||.. + .+ +.++.+++. -+++|+
T Consensus 149 v~vniggn~~t~~~~~dy~~~~~~~~~-~ad~ielNi----sCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv 223 (367)
T 3zwt_A 149 LGVNLGKNKTSVDAAEDYAEGVRVLGP-LADYLVVNV----SSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAV 223 (367)
T ss_dssp EEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEEC----CCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEE
T ss_pred EEEEEecCCCCCcCHHHHHHHHHHHhh-hCCEEEEEC----CCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceE
Confidence 55566431 34455555555554 366643333 344432 1 12 445555431 146777
Q ss_pred eeeeecc----CcHHhHHHHHhcCCCeEEEeccCC-------------CC---C-------HHHHHHHHhhC--CCcccc
Q psy11600 68 ETHMMVQ----NPQQWIEPMADANVDQYTFHVEPV-------------DN---V-------PQVIRQIKEAG--MKVGQV 118 (277)
Q Consensus 68 d~Hlmv~----~p~~~i~~l~~ag~d~i~~H~e~~-------------d~---g-------~~~i~~i~~~~--~~~~d~ 118 (277)
.+=+-.. +..+..+.+.++|+|.|++|--.. .| | .+.|+++++.. ..|+-.
T Consensus 224 ~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~ 303 (367)
T 3zwt_A 224 LVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIG 303 (367)
T ss_dssp EEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEE
Confidence 7765432 233457788899999999983221 12 2 26788888876 444422
Q ss_pred ------hhhhhHHHHhcCCCeEEee
Q psy11600 119 ------LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 119 ------p~~~i~~~~~~g~d~it~H 137 (277)
+++..+.+ ++|||.|-+-
T Consensus 304 ~GGI~s~~da~~~l-~~GAd~V~vg 327 (367)
T 3zwt_A 304 VGGVSSGQDALEKI-RAGASLVQLY 327 (367)
T ss_dssp ESSCCSHHHHHHHH-HHTCSEEEES
T ss_pred ECCCCCHHHHHHHH-HcCCCEEEEC
Confidence 55555555 4788888764
No 430
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=57.32 E-value=1.1e+02 Score=27.40 Aligned_cols=142 Identities=11% Similarity=0.086 Sum_probs=82.7
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCee--eeeeeccCc--HHhHHHHHhcCCCe
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFF--ETHMMVQNP--QQWIEPMADANVDQ 90 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~--d~Hlmv~~p--~~~i~~l~~ag~d~ 90 (277)
+...+.++.+++.+.|.+.+-+.+ | | .+..+.++++|+.+ ++.++ |+|--. ++ .++++.+.+.|++|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~---~--~~~~e~v~avr~~~g~~~~l~vDan~~~-~~~~~~~~~~l~~~~i~~ 212 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--E---P--GWDVEPVRAVRERFGDDVLLQVDANTAY-TLGDAPQLARLDPFGLLL 212 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--B---T--TBSHHHHHHHHHHHCTTSEEEEECTTCC-CGGGHHHHHTTGGGCCSE
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--C---c--hhHHHHHHHHHHhcCCCceEEEeccCCC-CHHHHHHHHHHHhcCCCe
Confidence 555566777777788988866654 2 3 46678999999876 45443 333111 23 34455556678888
Q ss_pred EEEeccCC-CCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCccce
Q psy11600 91 YTFHVEPV-DNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVGL 160 (277)
Q Consensus 91 i~~H~e~~-d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g~ 160 (277)
+- +.. ..-....+.+++.+..|+-. +.++.+.+.+-.+|.+.+-+--.+.+. ++.+..++.|+..=+
T Consensus 213 iE---~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 289 (368)
T 1sjd_A 213 IE---QPLEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWC 289 (368)
T ss_dssp EE---CCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred Ee---CCCChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEe
Confidence 73 222 22456677888877655522 555555555555899998664221232 344555566655433
Q ss_pred eeCCCCCH
Q psy11600 161 AIKPKTPV 168 (277)
Q Consensus 161 ~i~p~t~~ 168 (277)
+-+.++++
T Consensus 290 ~~~~es~i 297 (368)
T 1sjd_A 290 GGMIETGL 297 (368)
T ss_dssp CCCCCCHH
T ss_pred CCccccHH
Confidence 33445554
No 431
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=57.20 E-value=24 Score=33.28 Aligned_cols=117 Identities=16% Similarity=0.194 Sum_probs=50.6
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeee--eeeec-------cCcHHhHHHHHhc
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFE--THMMV-------QNPQQWIEPMADA 86 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d--~Hlmv-------~~p~~~i~~l~~a 86 (277)
..+.+.++.+.+.++..+. |.| |.++--++. .++++.+.. +...-| -.+++ .+-.+.++.+.++
T Consensus 174 ~~l~ea~~~m~~~~~~~lp--VVd~~g~lvGiIt~-~Dll~~~~~--~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~a 248 (494)
T 1vrd_A 174 ISLEKAKEILHQHRIEKLP--LVSKDNKLVGLITI-KDIMSVIEH--PNAARDEKGRLLVGAAVGTSPETMERVEKLVKA 248 (494)
T ss_dssp --------------------------------------CHHHHTC--TTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCcEEE--EEcCCCeEEEEEEH-HHHHhhhcc--ccccccchhhhccccccCcCHhHHHHHHHHHHh
Confidence 3566777777777777644 344 555533333 244555442 211111 12222 2235578889999
Q ss_pred CCCeEEEeccCCCC--CHHHHHHHHhhC-CCcccc----hhhhhHHHHhcCCCeEEeecC
Q psy11600 87 NVDQYTFHVEPVDN--VPQVIRQIKEAG-MKVGQV----LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 87 g~d~i~~H~e~~d~--g~~~i~~i~~~~-~~~~d~----p~~~i~~~~~~g~d~it~H~E 139 (277)
|+|.+.+|.-.... ..+.++++|+.. ..++-+ ..+-+..+.++|+|.|.+-.+
T Consensus 249 Gvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~ 308 (494)
T 1vrd_A 249 GVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVG 308 (494)
T ss_dssp TCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSS
T ss_pred CCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCC
Confidence 99999887643222 567888898886 344422 233457888999999988433
No 432
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=56.98 E-value=44 Score=29.90 Aligned_cols=83 Identities=12% Similarity=0.174 Sum_probs=51.8
Q ss_pred HHHHHHHHhcCCCCeeeeeeec-cCcHHhHHHHHhcC--CCeEEEeccCCC--CCHHHHHHHHhhCCC-ccc---c-hhh
Q psy11600 52 HPVVKCLRNKIPKAFFETHMMV-QNPQQWIEPMADAN--VDQYTFHVEPVD--NVPQVIRQIKEAGMK-VGQ---V-LQD 121 (277)
Q Consensus 52 ~~~v~~l~~~~~~~~~d~Hlmv-~~p~~~i~~l~~ag--~d~i~~H~e~~d--~g~~~i~~i~~~~~~-~~d---~-p~~ 121 (277)
..+++++++ .++++-+.+.. .+..+.++.+.++| ++++.++.-..+ ...+.|+++|+.+.. ++- + -.+
T Consensus 84 ~~~i~~~~~--~g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e 161 (336)
T 1ypf_A 84 ISFIRDMQS--RGLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPE 161 (336)
T ss_dssp HHHHHHHHH--TTCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHH
T ss_pred HHHHHHHHh--cCCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHH
Confidence 355676665 35555555432 12223467778889 999966541111 145688999988753 221 1 346
Q ss_pred hhHHHHhcCCCeEEe
Q psy11600 122 WIEPMADANVDQYTF 136 (277)
Q Consensus 122 ~i~~~~~~g~d~it~ 136 (277)
.++.+.++|||.|.+
T Consensus 162 ~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 162 AVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 788889999999988
No 433
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=56.88 E-value=1.1e+02 Score=27.57 Aligned_cols=175 Identities=16% Similarity=0.229 Sum_probs=91.5
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEE-ec-----cc----cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC----
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHL-DV-----MD----GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN---- 75 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~-Di-----mD----g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~---- 75 (277)
|.+...-...|.++++.+.+.|+..+=+ =| =| ..+-|+ ++=.+.|+.+|+.+|++.+-++.-.+.
T Consensus 51 PGv~r~sid~l~~~~~~~~~~Gi~~v~LFgvp~~~~Kd~~gs~A~~~~-g~v~~air~iK~~~pdl~vitDvcLc~YT~H 129 (330)
T 1pv8_A 51 PGVARYGVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEE-SPAIEAIHLLRKTFPNLLVACDVCLCPYTSH 129 (330)
T ss_dssp TTCEEECHHHHHHHHHHHHHHTCCEEEEEECC--------------CC-SHHHHHHHHHHHHSTTSEEEEEECCC-----
T ss_pred CCceeecHHHHHHHHHHHHHCCCCEEEEecCCcccCCCccccccCCCC-ChHHHHHHHHHHHCCCeEEEEeeecccccCC
Confidence 3444445567899999999999998543 11 11 123333 333589999999999987766553221
Q ss_pred --------------------cHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCC----cccc-----hhhhhHHH
Q psy11600 76 --------------------PQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMK----VGQV-----LQDWIEPM 126 (277)
Q Consensus 76 --------------------p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~----~~d~-----p~~~i~~~ 126 (277)
+.+..-...++|||++. ..|.|||--..|++.-..... ++.. -..|..+|
T Consensus 130 GHcGil~~~g~v~ND~Tl~~La~~Als~A~AGAdiVA-PSdMMDGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPF 208 (330)
T 1pv8_A 130 GHCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVA-PSDMMDGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPF 208 (330)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHTCSEEE-ECC--CCHHHHHHHHHHHTTCTTTCEEBCCCEECCCGGGHHH
T ss_pred CceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeee-cccccccHHHHHHHHHHhCCCcCCceEeehhHHHhHhhhhHH
Confidence 11112233578999996 789999843333333222221 2211 24456666
Q ss_pred HhcCC------CeEEeecCCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhh
Q psy11600 127 ADANV------DQYTFHVEPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMM 200 (277)
Q Consensus 127 ~~~g~------d~it~H~E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l 200 (277)
.++-- |.=|.+..| .+.-+.+++. ..+.-+-+|++. |.|+.+ +|
T Consensus 209 RdAa~Sap~~GDRktYQmdp----aN~~EAlre~----------------~~Di~EGAD~vM---VKPal~-------YL 258 (330)
T 1pv8_A 209 RDAAKSSPAFGDRRCYQLPP----GARGLALRAV----------------DRDVREGADMLM---VKPGMP-------YL 258 (330)
T ss_dssp HHCC-------------CCT----TCHHHHHHHH----------------HHHHHTTCSBEE---EESCGG-------GH
T ss_pred HHHHhcCCCCCCccccCCCC----CCHHHHHHHH----------------HhhHHhCCceEE---EecCcc-------HH
Confidence 66421 333444331 1111222221 123334577753 799864 68
Q ss_pred hhHHHHHhhCCCccEE
Q psy11600 201 PKVKWLRENYPTLNIE 216 (277)
Q Consensus 201 ~kI~~l~~~~~~~~i~ 216 (277)
+-|+.+++..|++-+.
T Consensus 259 DIi~~vk~~~p~~P~a 274 (330)
T 1pv8_A 259 DIVREVKDKHPDLPLA 274 (330)
T ss_dssp HHHHHHHHHSTTSCEE
T ss_pred HHHHHHHHhcCCCCeE
Confidence 8888888877555443
No 434
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=56.84 E-value=1.1e+02 Score=27.22 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=34.2
Q ss_pred HhHHHHHhcCCCeEEEeccCCC-C------------CHHHHHHHHhhCCCcccc---hhhhhHHHHhcCCCeE
Q psy11600 78 QWIEPMADANVDQYTFHVEPVD-N------------VPQVIRQIKEAGMKVGQV---LQDWIEPMADANVDQY 134 (277)
Q Consensus 78 ~~i~~l~~ag~d~i~~H~e~~d-~------------g~~~i~~i~~~~~~~~d~---p~~~i~~~~~~g~d~i 134 (277)
+..+++.+.|||+|-+-.|... | --.+|+++++....|+.+ -.+.++.-.++|+++|
T Consensus 67 ~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~aGa~iI 139 (297)
T 1tx2_A 67 RHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHcCCCEE
Confidence 3567778899999965555431 1 233446666655555443 3445566666788877
No 435
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=56.76 E-value=30 Score=30.27 Aligned_cols=89 Identities=10% Similarity=0.120 Sum_probs=56.4
Q ss_pred CCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc--CCCeEEEeccC-CCCCHHHHHHHHh----hCCC------c
Q psy11600 49 TFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA--NVDQYTFHVEP-VDNVPQVIRQIKE----AGMK------V 115 (277)
Q Consensus 49 ~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a--g~d~i~~H~e~-~d~g~~~i~~i~~----~~~~------~ 115 (277)
.||.+..+.+.++-+++-+-.+ +.++++.++.+.+. .+.++=+|.+. .++|+.+++.+++ .... .
T Consensus 18 ~~~~~l~~~~~~k~~~LiVALD--~~~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~L~~~a~~~g~~VflDlK~ 95 (260)
T 3eww_A 18 PVASKLLRLMQKKETNLCLSAD--VSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIFENRKF 95 (260)
T ss_dssp HHHHHHHHHHHHHTCCEEEECC--CSCHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred cHHHHHHHHHHhcCCCEEEEeC--CCCHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhcCCeEEEEeec
Confidence 5777888888765456444333 34555544433332 46788889886 4579999999987 3332 3
Q ss_pred ccchhhhhHHHH------hcCCCeEEeecC
Q psy11600 116 GQVLQDWIEPMA------DANVDQYTFHVE 139 (277)
Q Consensus 116 ~d~p~~~i~~~~------~~g~d~it~H~E 139 (277)
+|+|...-..+. ..++|++|+|.-
T Consensus 96 ~DIpnTv~~a~~~a~~~~~~~ad~vTVha~ 125 (260)
T 3eww_A 96 ADIGNTVKKQYEGGIFKIASWADLVNAHVV 125 (260)
T ss_dssp CSCHHHHHHHHHCTTTCGGGTCSEEEEEST
T ss_pred cccHHHHHHHHHHHHHhhhccCCEEEEeCC
Confidence 355755444332 247999999985
No 436
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=56.67 E-value=55 Score=23.87 Aligned_cols=82 Identities=18% Similarity=0.175 Sum_probs=49.8
Q ss_pred eeeeeeccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCC-Ccccc-----hhhhhHHHHhcCCCeEEeecC
Q psy11600 67 FETHMMVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGM-KVGQV-----LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~-~~~d~-----p~~~i~~~~~~g~d~it~H~E 139 (277)
+.+. .+.+..+.++.+.+...|.+.+.. ..+ .|.++++.+|+... .++-+ .........++|++.+..-.-
T Consensus 29 ~~v~-~~~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~ 106 (142)
T 2qxy_A 29 FNVI-WAKNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKPF 106 (142)
T ss_dssp CEEE-EESSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESSC
T ss_pred CEEE-EECCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCCC
Confidence 3454 556777777777777788887776 322 16778888887643 23322 344566677888875444333
Q ss_pred CCCChHHHHHHHHH
Q psy11600 140 PVDNVPQVIRQIKE 153 (277)
Q Consensus 140 ~~~~~~~~~~~I~~ 153 (277)
+...+.+.++.
T Consensus 107 ---~~~~l~~~i~~ 117 (142)
T 2qxy_A 107 ---RLDYLLERVKK 117 (142)
T ss_dssp ---CHHHHHHHHHH
T ss_pred ---CHHHHHHHHHH
Confidence 45566666654
No 437
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=56.59 E-value=26 Score=32.64 Aligned_cols=61 Identities=11% Similarity=0.162 Sum_probs=42.9
Q ss_pred HHhHHHHHhcCCCeEEEeccCCCC----CHHHHHHHHhhCCCcc---cc-hhhhhHHHHhcCCCeEEeecC
Q psy11600 77 QQWIEPMADANVDQYTFHVEPVDN----VPQVIRQIKEAGMKVG---QV-LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 77 ~~~i~~l~~ag~d~i~~H~e~~d~----g~~~i~~i~~~~~~~~---d~-p~~~i~~~~~~g~d~it~H~E 139 (277)
.+.++.+.++|+|.+.+. +..+ -++.|+++|+....++ .+ -.+.+..+.++|||.|.+..+
T Consensus 146 ~e~~~~lveaGvdvIvld--ta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g 214 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLD--SAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIG 214 (400)
T ss_dssp CHHHHHHHHHTCSEEEEC--CSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC-
T ss_pred HHHHHHHHHcCCCEEEEe--CCCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCC
Confidence 678999999999999653 2222 2567778877643332 22 456778889999999999766
No 438
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=56.27 E-value=76 Score=28.58 Aligned_cols=144 Identities=10% Similarity=0.109 Sum_probs=82.0
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEecccc--ccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHhcC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDG--TFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMADAN 87 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg--~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ag 87 (277)
.+...+.++.+++.+.|.+.+=+.+-.+ .+.+++.+..+.++++|+.+ +++++-+..--. ++. ++++.+.+.|
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 227 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLG 227 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 3555666777777788999866665432 12234455668899999865 454443332111 233 3567778889
Q ss_pred CCeEEEeccCC-CCCHHHHHHHHhhCCCcccc-------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCC
Q psy11600 88 VDQYTFHVEPV-DNVPQVIRQIKEAGMKVGQV-------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGM 156 (277)
Q Consensus 88 ~d~i~~H~e~~-d~g~~~i~~i~~~~~~~~d~-------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~ 156 (277)
++|+- +.. .......+.+++.+..|+-. +.++.+.+.+-.+|.+.+-+--.+.+. ++.+..++.|+
T Consensus 228 i~~iE---~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 304 (382)
T 1rvk_A 228 FDWIE---EPMDEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGM 304 (382)
T ss_dssp CSEEE---CCSCTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTC
T ss_pred CCEEe---CCCChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCC
Confidence 99883 222 22466788888877665522 444444445555899988442000122 34444455555
Q ss_pred cccee
Q psy11600 157 KVGLA 161 (277)
Q Consensus 157 ~~g~~ 161 (277)
..-.+
T Consensus 305 ~~~~~ 309 (382)
T 1rvk_A 305 ECEVH 309 (382)
T ss_dssp CEEEC
T ss_pred eEeec
Confidence 44444
No 439
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=56.26 E-value=55 Score=27.68 Aligned_cols=49 Identities=10% Similarity=-0.031 Sum_probs=29.9
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC--CCCeeeee
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI--PKAFFETH 70 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~--~~~~~d~H 70 (277)
...+++.++.+.+.|.+.+-+-.-+.. .+.+..++++|+.. .++.+.++
T Consensus 20 ~~~l~~~l~~~~~~G~~~vEl~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~ 70 (290)
T 3tva_A 20 DAGLGVHLEVAQDLKVPTVQVHAPHPH-----TRTREHAQAFRAKCDAAGIQVTVI 70 (290)
T ss_dssp SSSSSBCHHHHHHTTCSEEEEECCCGG-----GCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEecCCCCC-----cCCHHHHHHHHHHHHHcCCEEEEE
Confidence 567788999999999999665543322 13444444444321 46666655
No 440
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=56.23 E-value=58 Score=29.52 Aligned_cols=140 Identities=12% Similarity=0.095 Sum_probs=84.2
Q ss_pred ccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCee--eeeeeccCcHH---hHHHHHhcCCCeE
Q psy11600 18 SNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFF--ETHMMVQNPQQ---WIEPMADANVDQY 91 (277)
Q Consensus 18 ~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~--d~Hlmv~~p~~---~i~~l~~ag~d~i 91 (277)
..+.++.+++.+.|.+.+=+.+ |++-.+...-.+.++++|+.+ ++.++ |+|--..++.+ .++.+.+.|++|+
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~--g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~i 225 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGG--GVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWI 225 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEEC--TTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEecc--CCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEE
Confidence 6788888888888999877666 322112334567889999874 45443 44432222444 4566677799988
Q ss_pred EEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCcccee
Q psy11600 92 TFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVGLA 161 (277)
Q Consensus 92 ~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g~~ 161 (277)
- |+.. ......+.+|+.+..|+-. +.++.+.+..-.+|.+.+-+--.+-+. ++.+..++.|+..-.+
T Consensus 226 E---qP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h 302 (374)
T 3sjn_A 226 E---EPVLADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPH 302 (374)
T ss_dssp E---CSSCTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECCB
T ss_pred E---CCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 3 3332 2467788898888776633 566666666667899887654111122 3444455555544444
Q ss_pred e
Q psy11600 162 I 162 (277)
Q Consensus 162 i 162 (277)
.
T Consensus 303 ~ 303 (374)
T 3sjn_A 303 G 303 (374)
T ss_dssp C
T ss_pred C
Confidence 3
No 441
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=56.08 E-value=64 Score=29.00 Aligned_cols=148 Identities=7% Similarity=0.054 Sum_probs=85.6
Q ss_pred eccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCC-CCeeeeeeecc-CcHH---hHHHH-H
Q psy11600 11 SILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIP-KAFFETHMMVQ-NPQQ---WIEPM-A 84 (277)
Q Consensus 11 s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~-~~~~d~Hlmv~-~p~~---~i~~l-~ 84 (277)
|+...+...+.++.+++.+.|.+.+-+.+-+ +..+..+.++++|+.++ ++++-+..--. ++.+ +++.+ .
T Consensus 141 ~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-----~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~ 215 (371)
T 2ps2_A 141 SIYVGEPEDMRARVAKYRAKGYKGQSVKISG-----EPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPH 215 (371)
T ss_dssp EECSCCHHHHHHHHHHHHTTTCCEEEEECCS-----CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCT
T ss_pred EeCCCCHHHHHHHHHHHHHhChheEEeecCC-----CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHh
Confidence 3333466667777888888898885554321 23455688999998763 44432222111 3444 35555 5
Q ss_pred hcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhC
Q psy11600 85 DANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAG 155 (277)
Q Consensus 85 ~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g 155 (277)
+.|+ |+- ++.. .....+.+++.+..|+-. +.++.+.+.+-.+|.+.+-+--.+.+. ++.+..++.|
T Consensus 216 ~~~i-~iE---~P~~-~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 290 (371)
T 2ps2_A 216 GLDF-ALE---APCA-TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAG 290 (371)
T ss_dssp TCCC-EEE---CCBS-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHT
T ss_pred hcCC-cCc---CCcC-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcC
Confidence 6677 762 3333 567788888877666532 666666666667899988553111122 3444555666
Q ss_pred CccceeeCCCCCH
Q psy11600 156 MKVGLAIKPKTPV 168 (277)
Q Consensus 156 ~~~g~~i~p~t~~ 168 (277)
+..-.+...++++
T Consensus 291 ~~~~~~~~~es~i 303 (371)
T 2ps2_A 291 YSVSVQETCGSDI 303 (371)
T ss_dssp CEEEEECSSCCHH
T ss_pred CeEEecCCCcCHH
Confidence 5555554445554
No 442
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=56.00 E-value=57 Score=29.63 Aligned_cols=117 Identities=16% Similarity=0.109 Sum_probs=70.6
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHhcCCCe
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMADANVDQ 90 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ag~d~ 90 (277)
+...+.++.+++.+.|.+.+=+-+-+ +++.+..+.++++|+.+ +++++-+..--. ++. ++++.+.+.|++|
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~----~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~ 240 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGG----APIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFW 240 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSS----SCHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC----CCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCe
Confidence 55566777777788888886555433 23456678899999865 444433322111 233 3566677789998
Q ss_pred EEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhc----CCCeEEeecC
Q psy11600 91 YTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADA----NVDQYTFHVE 139 (277)
Q Consensus 91 i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~----g~d~it~H~E 139 (277)
+- +... ......+++++.+..|+-. +.++-+.+..- .+|.+.+-+-
T Consensus 241 iE---qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~ 297 (392)
T 1tzz_A 241 YE---EVGDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCA 297 (392)
T ss_dssp EE---CCSCTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTT
T ss_pred ec---CCCChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECcc
Confidence 73 3222 2456677888776665532 55444444444 4899888654
No 443
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=55.87 E-value=88 Score=26.01 Aligned_cols=110 Identities=14% Similarity=0.142 Sum_probs=68.8
Q ss_pred HHHHHHHHcCCCEEEEeccccccccCCC-CCHHHHHHHHhcCCCCeeeeeeeccCcHHh-HHHHHhcCCCeEEEeccCCC
Q psy11600 22 SESQNLLDSGADYLHLDVMDGTFVPNLT-FGHPVVKCLRNKIPKAFFETHMMVQNPQQW-IEPMADANVDQYTFHVEPVD 99 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~DimDg~fvp~~~-~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~-i~~l~~ag~d~i~~H~e~~d 99 (277)
++++.+.+.|+|++=+=... ++=. ..++..++|.+..|....-|-+.+....++ .+.+.+.+.|++.+|-+
T Consensus 13 eda~~a~~~GaD~iGfif~~----~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~--- 85 (205)
T 1nsj_A 13 EDALFSVESGADAVGFVFYP----KSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHGE--- 85 (205)
T ss_dssp HHHHHHHHHTCSEEEEECCT----TCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSEEEECSC---
T ss_pred HHHHHHHHcCCCEEEEEecC----CCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCC---
Confidence 55667778899996654221 1222 367888888877666566788888766555 45556679999999953
Q ss_pred CCHHHHHHHHhhC--CCcccc-hhhhhHHHHhcCCCeEEeec
Q psy11600 100 NVPQVIRQIKEAG--MKVGQV-LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 100 ~g~~~i~~i~~~~--~~~~d~-p~~~i~~~~~~g~d~it~H~ 138 (277)
..+..++++|+.. .+.+.+ ...-++.+.+..+|++.|-.
T Consensus 86 e~~~~~~~l~~~~~vika~~v~~~~~l~~~~~~~~d~~LlD~ 127 (205)
T 1nsj_A 86 EPIELCRKIAERILVIKAVGVSNERDMERALNYREFPILLDT 127 (205)
T ss_dssp CCHHHHHHHHTTSEEEEEEEESSHHHHHHHGGGTTSCEEEEE
T ss_pred CCHHHHHHHhcCCCEEEEEEcCCHHHHHHHHHcCCCEEEECC
Confidence 4678888886321 111222 12223344444488888854
No 444
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=55.81 E-value=60 Score=24.10 Aligned_cols=86 Identities=7% Similarity=0.032 Sum_probs=54.9
Q ss_pred eeeeeeeccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCC-Ccccc-----hhhhhHHHHhcCCCeEEeec
Q psy11600 66 FFETHMMVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGM-KVGQV-----LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 66 ~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~-~~~d~-----p~~~i~~~~~~g~d~it~H~ 138 (277)
.+.+.-.+.+..+.++.+.+...|.+.+.++..+ .|.++++.+|+... .++-+ .........++|++.+..-.
T Consensus 30 ~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp 109 (153)
T 3cz5_A 30 GYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKS 109 (153)
T ss_dssp TEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETT
T ss_pred CcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEecC
Confidence 3444445677887788887777888877766433 37888999988743 23222 34566667788987554443
Q ss_pred CCCCChHHHHHHHHHh
Q psy11600 139 EPVDNVPQVIRQIKEA 154 (277)
Q Consensus 139 E~~~~~~~~~~~I~~~ 154 (277)
- +...+.+.++.+
T Consensus 110 ~---~~~~L~~~i~~~ 122 (153)
T 3cz5_A 110 S---DPAELVQAIEAI 122 (153)
T ss_dssp S---CTTHHHHHHHHH
T ss_pred C---CHHHHHHHHHHH
Confidence 3 455666666654
No 445
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=55.76 E-value=50 Score=23.10 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=47.7
Q ss_pred eeeeeccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCC
Q psy11600 68 ETHMMVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPV 141 (277)
Q Consensus 68 d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~ 141 (277)
.+. .+.+..+.++.+.+...|.+.+.+...+ .|.++++.+|+....++-+ .........++|++-+..-+-
T Consensus 27 ~v~-~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~-- 103 (120)
T 2a9o_A 27 EVV-TAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYVTKPF-- 103 (120)
T ss_dssp EEE-EESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSC--
T ss_pred EEE-EecCHHHHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCchHHHHHHHhCCHhheEeCCC--
Confidence 443 4556677777777777888766655432 2778888888754333322 233445556778765554433
Q ss_pred CChHHHHHHHHH
Q psy11600 142 DNVPQVIRQIKE 153 (277)
Q Consensus 142 ~~~~~~~~~I~~ 153 (277)
+...+.+.++.
T Consensus 104 -~~~~l~~~i~~ 114 (120)
T 2a9o_A 104 -SNRELQARVKA 114 (120)
T ss_dssp -CHHHHHHHHHH
T ss_pred -CHHHHHHHHHH
Confidence 45555555543
No 446
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=55.59 E-value=41 Score=29.58 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=62.9
Q ss_pred CCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCe----EEEeccCCCCCHHHHHHHHhhCCCcc--cc--h-
Q psy11600 49 TFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQ----YTFHVEPVDNVPQVIRQIKEAGMKVG--QV--L- 119 (277)
Q Consensus 49 ~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~----i~~H~e~~d~g~~~i~~i~~~~~~~~--d~--p- 119 (277)
+|.++.++.+++..|++++-. .+.++. .++.+...|+++ ..++.+.....+.+|+.+++.+..+. -+ +
T Consensus 164 Sf~~~~l~~~~~~~p~~~~~~--l~~~~~-~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~G~~V~vWTv~t~d 240 (292)
T 3mz2_A 164 VHDGASARFFYEKNPNFMFEA--FVKTKE-AVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHERGVMCMISTAPSDD 240 (292)
T ss_dssp ESSHHHHHHHHHHCTTCCEEE--ECCSHH-HHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHTTBCEEEECTTTGG
T ss_pred ECCHHHHHHHHHHCCCCeEEE--EeCCHH-HHHHHHHhCCChhheeeeecccccccCHHHHHHHHHCCCEEEEEeCCCcc
Confidence 689999999999889876654 344544 456677778653 12244333236789999999886533 11 2
Q ss_pred --------hhhhHHHHhcCCCeEEeecCCCCChHHHHHHHHH
Q psy11600 120 --------QDWIEPMADANVDQYTFHVEPVDNVPQVIRQIKE 153 (277)
Q Consensus 120 --------~~~i~~~~~~g~d~it~H~E~~~~~~~~~~~I~~ 153 (277)
..-...+.+.|+|.|+== .+..+.+.++.
T Consensus 241 ~~~~~~~~~~~~~~L~~~GVDgIiTD-----~P~~l~~~L~~ 277 (292)
T 3mz2_A 241 KLSTPESRAEAYRMIIRQGVDIIESD-----RPIEVAEAISS 277 (292)
T ss_dssp GSSSHHHHHHHHHHHHHTTCCEEEES-----CHHHHHHHHGG
T ss_pred hhhhccccHHHHHHHHHcCCCEEEeC-----CHHHHHHHHHH
Confidence 346778899999998852 34445555543
No 447
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=55.55 E-value=67 Score=26.45 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=55.3
Q ss_pred eeeeeeccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCC-Ccccc-----hhhhhHHHHhcCCCeEEeecC
Q psy11600 67 FETHMMVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGM-KVGQV-----LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~-~~~d~-----p~~~i~~~~~~g~d~it~H~E 139 (277)
+.+. .+.+..+.++.+.+...|.+.+.+...+. |.++++.+|+... .++-+ -........++||+-+-.-.-
T Consensus 48 ~~v~-~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~ 126 (250)
T 3r0j_A 48 FEVY-TATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVTKPF 126 (250)
T ss_dssp CEEE-EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEESSC
T ss_pred CEEE-EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEeCCC
Confidence 4554 56678888888888788988777664332 8889999988743 33322 345566677899986665554
Q ss_pred CCCChHHHHHHHHH
Q psy11600 140 PVDNVPQVIRQIKE 153 (277)
Q Consensus 140 ~~~~~~~~~~~I~~ 153 (277)
+...+...|+.
T Consensus 127 ---~~~~L~~~i~~ 137 (250)
T 3r0j_A 127 ---SLEEVVARLRV 137 (250)
T ss_dssp ---CHHHHHHHHHH
T ss_pred ---CHHHHHHHHHH
Confidence 56666666654
No 448
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=55.28 E-value=18 Score=32.62 Aligned_cols=73 Identities=11% Similarity=0.075 Sum_probs=50.6
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCC-CCeeeeeeeccCcHHh--HHHHHhcCCC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIP-KAFFETHMMVQNPQQW--IEPMADANVD 89 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~-~~~~d~Hlmv~~p~~~--i~~l~~ag~d 89 (277)
.++..+.+..+.+.+.|++. +=+.| |...|+ --.+.++.+|+.+| ++++.+|.=-..-... .-...++|++
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~--i~l~DT~G~~~P~--~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~ 221 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATC--IYMADSGGAMSMN--DIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCD 221 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSE--EEEECTTCCCCHH--HHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCE--EEECCCcCccCHH--HHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCC
Confidence 45667788888899999998 77788 444444 12366888898875 8999998765442222 2234568999
Q ss_pred eE
Q psy11600 90 QY 91 (277)
Q Consensus 90 ~i 91 (277)
++
T Consensus 222 ~v 223 (345)
T 1nvm_A 222 RV 223 (345)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 449
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=55.00 E-value=68 Score=28.72 Aligned_cols=147 Identities=12% Similarity=0.220 Sum_probs=83.5
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHh--cC
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMAD--AN 87 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~--ag 87 (277)
.+...+.++.+++.+.|.+.+-+-+ |. +++.+..+.++++|+.+ ++.++-+..--. ++. ++++.+.+ .|
T Consensus 139 ~~~~~~~~~a~~~~~~Gf~~iKik~--g~--~~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~ 214 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQGFQTLKIKV--GK--DDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLG 214 (366)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEEC--CS--SCHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEe--CC--CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCC
Confidence 3555666777777778888865544 22 23445568899999876 454443332111 233 35677778 78
Q ss_pred CCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCc
Q psy11600 88 VDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMK 157 (277)
Q Consensus 88 ~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~ 157 (277)
++|+- |... ......+.+++.+..|+-. +.++.+.+..-.+|.+.+-+--.+.+. ++.+..++.|+.
T Consensus 215 i~~iE---qP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~ 291 (366)
T 1tkk_A 215 IELVE---QPVHKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVE 291 (366)
T ss_dssp EEEEE---CCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCC
T ss_pred ceEEE---CCCCcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCc
Confidence 77772 3322 2466778888877666522 566666666667999988543101122 344445555555
Q ss_pred cceeeCCCCCH
Q psy11600 158 VGLAIKPKTPV 168 (277)
Q Consensus 158 ~g~~i~p~t~~ 168 (277)
.-.+-..++++
T Consensus 292 ~~~~~~~es~i 302 (366)
T 1tkk_A 292 CMVGSMIETKL 302 (366)
T ss_dssp EEECCSSCCHH
T ss_pred EEecCccccHH
Confidence 43333333444
No 450
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=54.61 E-value=55 Score=27.24 Aligned_cols=80 Identities=9% Similarity=0.057 Sum_probs=54.5
Q ss_pred eccCcHHhHHHHHhcCCCeEEEeccCCCC-CHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCCChH
Q psy11600 72 MVQNPQQWIEPMADANVDQYTFHVEPVDN-VPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVDNVP 145 (277)
Q Consensus 72 mv~~p~~~i~~l~~ag~d~i~~H~e~~d~-g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~~ 145 (277)
-+.+..+.++.+.+...|.+.+.+...+. |.++++.+|+....++-+ ...++....++||+-+-.-.- +..
T Consensus 66 ~~~~~~~al~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~Kp~---~~~ 142 (249)
T 3q9s_A 66 HADSAMNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLGLGADDYLIKPF---HPD 142 (249)
T ss_dssp EESSHHHHHHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSC---CHH
T ss_pred EeCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHCCCcEEEECCC---CHH
Confidence 45677777888888888988777654332 888999998854444332 345667777889876655544 566
Q ss_pred HHHHHHHHh
Q psy11600 146 QVIRQIKEA 154 (277)
Q Consensus 146 ~~~~~I~~~ 154 (277)
.+...|+..
T Consensus 143 ~L~~~i~~~ 151 (249)
T 3q9s_A 143 ELLARVKVQ 151 (249)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777754
No 451
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=54.59 E-value=76 Score=29.13 Aligned_cols=147 Identities=12% Similarity=0.134 Sum_probs=86.0
Q ss_pred CcccHHHHHHHHHHcCCCEEEEecc-----------cc---ccccCCC-------CCHHHHHHHHhcC-CCCeeeeeeec
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVM-----------DG---TFVPNLT-------FGHPVVKCLRNKI-PKAFFETHMMV 73 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~Dim-----------Dg---~fvp~~~-------~g~~~v~~l~~~~-~~~~~d~Hlmv 73 (277)
+...+.++.+.+.+.|...+=+.+. .| .|-|+.. +-.+.++++|+.+ ++.++-+..--
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN~ 222 (409)
T 3go2_A 143 DLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLNF 222 (409)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4556677778888889999988882 12 2334322 2247899999876 56554444221
Q ss_pred c-CcHH---hHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCC
Q psy11600 74 Q-NPQQ---WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDN 143 (277)
Q Consensus 74 ~-~p~~---~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~ 143 (277)
. ++.+ .++.+.+.|++|+. ++.+ ....++++++.+..|+-. +.++.+.+..-.+|.+.+-+-- +-
T Consensus 223 ~~~~~~A~~~~~~L~~~~i~~iE---~P~~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~-GG 297 (409)
T 3go2_A 223 NAKPEGYLKILRELADFDLFWVE---IDSY-SPQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVAIVDTIW-NG 297 (409)
T ss_dssp CSCHHHHHHHHHHTTTSCCSEEE---CCCS-CHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEEEECHHH-HC
T ss_pred CCCHHHHHHHHHHHhhcCCeEEE---eCcC-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEeCCCC-CC
Confidence 1 2333 46667778999995 3332 466788898888776633 5555555555568998875421 11
Q ss_pred hH---HHHHHHHHhCCccceeeCCCCCH
Q psy11600 144 VP---QVIRQIKEAGMKVGLAIKPKTPV 168 (277)
Q Consensus 144 ~~---~~~~~I~~~g~~~g~~i~p~t~~ 168 (277)
+. ++.+..++.|+..-.+ +.++++
T Consensus 298 it~~~~ia~~A~~~gi~~~~h-~~~s~i 324 (409)
T 3go2_A 298 VWQSMKIAAFADAHDINVAPH-NFYGHL 324 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCSCHH
T ss_pred HHHHHHHHHHHHHcCCEEeec-CCCcHH
Confidence 22 3444445555554433 234444
No 452
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=54.53 E-value=1.3e+02 Score=27.40 Aligned_cols=96 Identities=21% Similarity=0.225 Sum_probs=60.8
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEE-ec------cc--c--ccccCCCCCHHHHHHHHhcCCCCeeeeeeecc----
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHL-DV------MD--G--TFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQ---- 74 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~-Di------mD--g--~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~---- 74 (277)
|.+...-...|.++++.+.+.|+..+=+ =| =| | .+-|+ ++=.+.|+.+|+.+|++.+-++.-.+
T Consensus 61 PGv~r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~-g~v~rair~iK~~~pdl~VitDvcLc~YT~ 139 (342)
T 1h7n_A 61 PNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPA-GPVIQGIKFIREYFPELYIICDVCLCEYTS 139 (342)
T ss_dssp TTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTT-SHHHHHHHHHHHHCTTSEEEEEECSTTTBT
T ss_pred CCceeeCHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCC-ChHHHHHHHHHHHCCCeEEEEeeecccccC
Confidence 3444445567899999999999998544 12 11 2 23332 33358999999999998776554321
Q ss_pred --------------C------cHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHh
Q psy11600 75 --------------N------PQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKE 110 (277)
Q Consensus 75 --------------~------p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~ 110 (277)
| +.+..-...++|||++. ..|.|||- |.+||+
T Consensus 140 HGHcGil~~~g~V~ND~Tl~~Lak~Als~A~AGAdiVA-PSdMMDGr---V~aIR~ 191 (342)
T 1h7n_A 140 HGHCGVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVA-PSDMIDGR---IRDIKR 191 (342)
T ss_dssp TCCSSCBCTTSSBCHHHHHHHHHHHHHHHHHHTCSEEE-ECCCCTTH---HHHHHH
T ss_pred CCceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeee-cccccccH---HHHHHH
Confidence 1 11122234578999996 78999984 444444
No 453
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=54.32 E-value=38 Score=30.45 Aligned_cols=127 Identities=15% Similarity=0.090 Sum_probs=88.6
Q ss_pred eeccccCcccHHHHHHHHHHc--------CCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeee------------
Q psy11600 10 PSILNSDLSNLHSESQNLLDS--------GADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFET------------ 69 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~--------~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~------------ 69 (277)
|=.|..|-..-.+.+.+..+. |..++=+|--.-+|-.|+...-++++..++. ++.+++
T Consensus 84 PVaLHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~--gvsVEaElG~igG~Edgv 161 (306)
T 3pm6_A 84 PITLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNAR--GIATEAEPGRIEGGEDGV 161 (306)
T ss_dssp CEEEEEEEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTT--TCEEEECSSBCCCCBTTB
T ss_pred CEEEEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHc--CCeEEEEeeeeccccCCc
Confidence 445556666545667777777 9999988888888888888888888877753 444432
Q ss_pred ------eeeccCcHHhHHHHHhcCCCeEEEeccCC---------CCCHHHHHHHHhhC--CCccc------chhhhhHHH
Q psy11600 70 ------HMMVQNPQQWIEPMADANVDQYTFHVEPV---------DNVPQVIRQIKEAG--MKVGQ------VLQDWIEPM 126 (277)
Q Consensus 70 ------Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~---------d~g~~~i~~i~~~~--~~~~d------~p~~~i~~~ 126 (277)
.-...+|++-.+.. +.|+|++.+=+-.. ..-++.++.|++.. ..|+- +|++.+...
T Consensus 162 ~~~~~~~~~yT~Peea~~Fv-~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~a 240 (306)
T 3pm6_A 162 QDTVDLEGVLTTPEESEEFV-ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKC 240 (306)
T ss_dssp CCCTTCCCBCCCHHHHHHHH-TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHH
T ss_pred cccccccccCCCHHHHHHHH-HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHH
Confidence 12346788766544 89999884332221 12688999999875 33432 299999999
Q ss_pred HhcCCCeEEeecC
Q psy11600 127 ADANVDQYTFHVE 139 (277)
Q Consensus 127 ~~~g~d~it~H~E 139 (277)
+++|+.-|-+..|
T Consensus 241 i~~GV~KiNi~Td 253 (306)
T 3pm6_A 241 IERGVAKVNVNRA 253 (306)
T ss_dssp HHTTEEEEEESHH
T ss_pred HHcCCeEEEeChH
Confidence 9999988888554
No 454
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=54.31 E-value=1.4e+02 Score=27.99 Aligned_cols=135 Identities=14% Similarity=0.081 Sum_probs=71.2
Q ss_pred CCeEEEeccC-CCCCHHHHHHHHhh------CCC-c-----ccch---hhhhHHHH-hcCCCeEEeecCCCCChHHHHH-
Q psy11600 88 VDQYTFHVEP-VDNVPQVIRQIKEA------GMK-V-----GQVL---QDWIEPMA-DANVDQYTFHVEPVDNVPQVIR- 149 (277)
Q Consensus 88 ~d~i~~H~e~-~d~g~~~i~~i~~~------~~~-~-----~d~p---~~~i~~~~-~~g~d~it~H~E~~~~~~~~~~- 149 (277)
+.++=+..+- ...|+..++.+++. ... . +|.| ..|.+.+. +.|+|.+|+|.- .-.+.++
T Consensus 46 v~~~Kvg~~lf~~~G~~~v~~L~~~~~~~~~g~~VflDlK~~DIpnT~~~~a~~~~~~lg~d~vTvh~~---~G~~~l~~ 122 (453)
T 3qw4_B 46 AAAYKPNAAFFEFFGAEGWAALSEVIRAVPAGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASPY---MGSDSLQP 122 (453)
T ss_dssp CSEEEEBHHHHHTTHHHHHHHHHHHHHTSCTTSCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECST---TCHHHHHH
T ss_pred CcEEEEcHHHHHhcCHHHHHHHHHHHHhhcCCCeEEEEeecCChHHHHHHHHHHHHHHcCCCEEEEccc---CCHHHHHH
Confidence 4555555443 24599999999872 322 2 2445 56777766 499999999974 2123332
Q ss_pred HHHHhCCccceeeCCCCC----------------H-HhHHHHHh-hc-CceEEEEecCCCCCchhhhhhhhhHHHHHhhC
Q psy11600 150 QIKEAGMKVGLAIKPKTP----------------V-DVIAEYIE-SA-DLVLIMTVEPGFGGQKFMQDMMPKVKWLRENY 210 (277)
Q Consensus 150 ~I~~~g~~~g~~i~p~t~----------------~-~~i~~~i~-~~-d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~ 210 (277)
.++..| +|+.+-..|+ + +.+..+.. .. ..-+.-.|.+.|+++ .++.+++..
T Consensus 123 ~~~~~~--~~v~vL~~tS~~~~~~lq~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~gat~~~--------e~~~ir~~~ 192 (453)
T 3qw4_B 123 FMRYPD--KAVFVLCKTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGATDPV--------ALARVRARA 192 (453)
T ss_dssp HHTCTT--SEEEEEEECSSGGGGGTTTSEETTEEHHHHHHHHHTTTTCTTSCEEEEECTTCHH--------HHHHHHHHC
T ss_pred HHHhhC--CcEEEEEeCCCcchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCeEEEECCCCHH--------HHHHHHHhC
Confidence 222222 2332222222 1 12222222 11 011222345556542 356667666
Q ss_pred CCccEEEeCCCCc--CcHHHHHHccCCC
Q psy11600 211 PTLNIEVDGGVGP--NTIDECAKCLTGF 236 (277)
Q Consensus 211 ~~~~i~vdGgV~~--~tv~~~~~~gpg~ 236 (277)
++.-+ +-.||.. .|..+..++|+++
T Consensus 193 ~~~~~-l~PGig~qg~tp~~a~~~g~d~ 219 (453)
T 3qw4_B 193 PTLWF-LVPGIGAQGGSLKASLDAGLRA 219 (453)
T ss_dssp SSCCE-EECCSSTTCCCHHHHHHHHCCT
T ss_pred CCCeE-EECCcCCCCCCHHHHHHhcCCc
Confidence 65444 4466554 5888888888887
No 455
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=53.97 E-value=93 Score=25.72 Aligned_cols=32 Identities=3% Similarity=-0.213 Sum_probs=25.6
Q ss_pred ceEeeeccccCcccHHHHHHHHHHcCCCEEEE
Q psy11600 6 CMIGPSILNSDLSNLHSESQNLLDSGADYLHL 37 (277)
Q Consensus 6 ~~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~ 37 (277)
++|+-+.++.-...+.+.++.+.+.|.+.+-+
T Consensus 7 m~lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl 38 (272)
T 2q02_A 7 TRFCINRKIAPGLSIEAFFRLVKRLEFNKVEL 38 (272)
T ss_dssp GGEEEEGGGCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred hhhhhcccccCCCCHHHHHHHHHHcCCCEEEe
Confidence 45777777766668999999999999999544
No 456
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=53.94 E-value=38 Score=30.68 Aligned_cols=122 Identities=14% Similarity=0.129 Sum_probs=86.5
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeee--------------eeeccC
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFET--------------HMMVQN 75 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~--------------Hlmv~~ 75 (277)
|=.+..|-..-.+.+++..+.|..++=+|--.-+|=.|+...-++++..++. ++.+++ .-...+
T Consensus 77 PValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~--gvsVEaELG~vgg~Ed~v~~~~~yTd 154 (323)
T 2isw_A 77 PICIHLDHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHAR--SVSVEAELGTLGGIEEDVQNTVQLTE 154 (323)
T ss_dssp CEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTT--TCEEEEEESCC----------CCCCC
T ss_pred cEEEECCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHc--CCeEEEEeCCccCCccCcccccccCC
Confidence 4456667665566778888889999888877777777888777778777653 333321 224478
Q ss_pred cHHhHHHHHhcCCCeEEEeccCCCC------C------HHHHHHHHhhCCCcc------cchhhhhHHHHhcCCCe
Q psy11600 76 PQQWIEPMADANVDQYTFHVEPVDN------V------PQVIRQIKEAGMKVG------QVLQDWIEPMADANVDQ 133 (277)
Q Consensus 76 p~~~i~~l~~ag~d~i~~H~e~~d~------g------~~~i~~i~~~~~~~~------d~p~~~i~~~~~~g~d~ 133 (277)
|++-.+.+.+.|+|++.+=+-..-| . ++.++.|++....|+ .+|.+|++.+-++|.++
T Consensus 155 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~gg~~ 230 (323)
T 2isw_A 155 PQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKM 230 (323)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhcccc
Confidence 9988888888999999765543322 2 358899988775544 24999999999999876
No 457
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=53.85 E-value=62 Score=23.65 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=45.7
Q ss_pred eccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCCChH
Q psy11600 72 MVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVDNVP 145 (277)
Q Consensus 72 mv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~~ 145 (277)
.+.+..+.++.+.+...|.+.+.+...+ .|.++++.+|+....++-+ .........++|++-+..-+- +..
T Consensus 33 ~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~---~~~ 109 (136)
T 2qzj_A 33 LAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLIKPL---NLE 109 (136)
T ss_dssp EESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCEEEESSC---CHH
T ss_pred EECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCCHHHHHHHHHcCCcEEEECCC---CHH
Confidence 4556666677666666777765554322 2677788887654322211 234556667788876554443 455
Q ss_pred HHHHHHHH
Q psy11600 146 QVIRQIKE 153 (277)
Q Consensus 146 ~~~~~I~~ 153 (277)
.+.+.++.
T Consensus 110 ~L~~~l~~ 117 (136)
T 2qzj_A 110 ILYAKVKA 117 (136)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 56555554
No 458
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=53.71 E-value=20 Score=33.52 Aligned_cols=109 Identities=15% Similarity=0.192 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHc----CCCEEEEeccccccccCCCCCH----HHHHHHHhcCCC-CeeeeeeeccCc----HHhHHHHHh
Q psy11600 19 NLHSESQNLLDS----GADYLHLDVMDGTFVPNLTFGH----PVVKCLRNKIPK-AFFETHMMVQNP----QQWIEPMAD 85 (277)
Q Consensus 19 ~l~~~~~~l~~~----~~~~~h~DimDg~fvp~~~~g~----~~v~~l~~~~~~-~~~d~Hlmv~~p----~~~i~~l~~ 85 (277)
.+.+|++.+.+. +++.+| +-+|+ |.+ +.+ ++++.+++.++- -...+.+ -.|| .+.++.+.+
T Consensus 88 ~l~~Ei~~~~~~~~~~~i~~i~--fgGGt--pt~-l~~~~l~~ll~~i~~~~~~~~~~eiti-e~~p~~l~~e~l~~L~~ 161 (457)
T 1olt_A 88 ALEQEIVHRAPLFAGRHVSQLH--WGGGT--PTY-LNKAQISRLMKLLRENFQFNADAEISI-EVDPREIELDVLDHLRA 161 (457)
T ss_dssp HHHHHHHHHGGGGTTCCEEEEE--EEESC--GGG-SCHHHHHHHHHHHHHHSCEEEEEEEEE-EECSSSCCTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEE--EeCCC--ccc-CCHHHHHHHHHHHHHhCCCCCCcEEEE-EEccCcCCHHHHHHHHH
Confidence 455666665443 233333 44444 321 233 455666664321 0122333 2254 357999999
Q ss_pred cCCCeEEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEee
Q psy11600 86 ANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 86 ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H 137 (277)
+|++++++=+++. .+++++.+++... .+--.+-++.+.++|.+.+++|
T Consensus 162 ~G~~rislGvQS~--~~~~l~~i~R~~~--~~~~~~ai~~~r~~G~~~v~~d 209 (457)
T 1olt_A 162 EGFNRLSMGVQDF--NKEVQRLVNREQD--EEFIFALLNHAREIGFTSTNID 209 (457)
T ss_dssp TTCCEEEEEEECC--CHHHHHHHTCCCC--HHHHHHHHHHHHHTTCCSCEEE
T ss_pred cCCCEEEEeeccC--CHHHHHHhCCCCC--HHHHHHHHHHHHHcCCCcEEEE
Confidence 9999996666554 4677777754321 1113344455556666544443
No 459
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=53.60 E-value=71 Score=27.04 Aligned_cols=59 Identities=8% Similarity=0.085 Sum_probs=44.5
Q ss_pred HHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEE
Q psy11600 22 SESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYT 92 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~ 92 (277)
+-.+.+...|++.+|.+.- ...++.++.+++. + +.++.++-|-.+.++.+.+.|+|.|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~--G--~~V~~WTvn~~~~~~~l~~~GVDgIi 230 (250)
T 3ks6_A 172 AVIETAIAHSIHEIGVHID--------TADAGLMAQVQAA--G--LDFGCWAAHTPSQITKALDLGVKVFT 230 (250)
T ss_dssp HHHHHHHHTTCCEEEEEGG--------GCCHHHHHHHHHT--T--CEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHhcCCCEEecchh--------hCCHHHHHHHHHC--C--CEEEEEeCCCHHHHHHHHHcCCCEEE
Confidence 3444556788999887642 2467899999974 4 56677788877888899999999983
No 460
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=53.52 E-value=38 Score=29.89 Aligned_cols=107 Identities=16% Similarity=0.086 Sum_probs=58.2
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCH---HHHHHHHhcCCCCeeeeeeeccCcHHhHHHHH----hcCCCeEEE
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGH---PVVKCLRNKIPKAFFETHMMVQNPQQWIEPMA----DANVDQYTF 93 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~---~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~----~ag~d~i~~ 93 (277)
-+-++.|.+.|+++ +.+ .| |. -+| +.++++++..++..+.+..- +..+.++... .+|++.+++
T Consensus 30 ~~i~~~L~~~Gv~~--IE~---g~-p~--~~~~d~e~v~~i~~~~~~~~i~~l~~--~~~~di~~a~~~~~~ag~~~v~i 99 (293)
T 3ewb_X 30 IQIALQLEKLGIDV--IEA---GF-PI--SSPGDFECVKAIAKAIKHCSVTGLAR--CVEGDIDRAEEALKDAVSPQIHI 99 (293)
T ss_dssp HHHHHHHHHHTCSE--EEE---EC-GG--GCHHHHHHHHHHHHHCCSSEEEEEEE--SSHHHHHHHHHHHTTCSSEEEEE
T ss_pred HHHHHHHHHcCCCE--EEE---eC-CC--CCccHHHHHHHHHHhcCCCEEEEEec--CCHHHHHHHHHHHhhcCCCEEEE
Confidence 34456677788887 333 23 22 233 56788877667777666543 3233344444 468998865
Q ss_pred eccCCCC----------------CHHHHHHHHhhCCCc-ccc-------h---hhhhHHHHhcCCCeEEee
Q psy11600 94 HVEPVDN----------------VPQVIRQIKEAGMKV-GQV-------L---QDWIEPMADANVDQYTFH 137 (277)
Q Consensus 94 H~e~~d~----------------g~~~i~~i~~~~~~~-~d~-------p---~~~i~~~~~~g~d~it~H 137 (277)
..-+.|. ..+.++..|+.+..+ +.. | .++++.+.++|++.|++-
T Consensus 100 ~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~ 170 (293)
T 3ewb_X 100 FLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIP 170 (293)
T ss_dssp EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 5333321 234445555554321 111 2 344566777888877763
No 461
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=53.50 E-value=31 Score=32.84 Aligned_cols=64 Identities=17% Similarity=0.161 Sum_probs=44.1
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCCC--CHHHHHHHHhhC-CCccc---c-hhhhhHHHHhcCCCeEEeec
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVDN--VPQVIRQIKEAG-MKVGQ---V-LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d~--g~~~i~~i~~~~-~~~~d---~-p~~~i~~~~~~g~d~it~H~ 138 (277)
+..+.++.+.++|+|.+.++.-.... ..+.|+++|+.. ..++- + -.+.++.+.++|||.|.+-.
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~ 301 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGI 301 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred chHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECC
Confidence 34667889999999999555332111 346788888876 33432 2 45678889999999998743
No 462
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=53.40 E-value=19 Score=34.23 Aligned_cols=70 Identities=20% Similarity=0.347 Sum_probs=50.4
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccc--cccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC---cHHhHHHHHhcCCCe
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMD--GTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN---PQQWIEPMADANVDQ 90 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimD--g~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~---p~~~i~~l~~ag~d~ 90 (277)
|+..+-+.++.+.+.|+++ +=+-| |...|.-. .+.++.+|+.+ ++++.+|.=-.. ..+.+. ..++||++
T Consensus 156 ~~e~~~~~a~~l~~~Gad~--I~l~DT~G~~~P~~v--~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~la-Av~AGa~~ 229 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDS--IALKDMAGILTPYAA--EELVSTLKKQV-DVELHLHCHSTAGLADMTLLK-AIEAGVDR 229 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSE--EEEEETTSCCCHHHH--HHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHH-HHHTTCSE
T ss_pred CHHHHHHHHHHHHHCCCCE--EEEcCCCCCcCHHHH--HHHHHHHHHhc-CCeEEEEECCCCChHHHHHHH-HHHhCCCE
Confidence 6666778888899999999 66677 66666532 36788999875 789999986544 333343 35689998
Q ss_pred E
Q psy11600 91 Y 91 (277)
Q Consensus 91 i 91 (277)
+
T Consensus 230 V 230 (464)
T 2nx9_A 230 V 230 (464)
T ss_dssp E
T ss_pred E
Confidence 8
No 463
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=53.31 E-value=66 Score=29.43 Aligned_cols=126 Identities=13% Similarity=0.184 Sum_probs=76.0
Q ss_pred eccccCcccHHHHHHHHHHcCCCEEEEeccc-ccc---cc-------C--------CCCCHHHHHHHHhcC-CCCeeeee
Q psy11600 11 SILNSDLSNLHSESQNLLDSGADYLHLDVMD-GTF---VP-------N--------LTFGHPVVKCLRNKI-PKAFFETH 70 (277)
Q Consensus 11 s~~~~d~~~l~~~~~~l~~~~~~~~h~DimD-g~f---vp-------~--------~~~g~~~v~~l~~~~-~~~~~d~H 70 (277)
++...+...+.++.+.+.+.|...+=+.+-- +.- .| . +.+-.+.++++|+.+ ++.++-+.
T Consensus 128 ~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vD 207 (401)
T 3sbf_A 128 HATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHD 207 (401)
T ss_dssp EEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 4444566777888888888899998877732 100 00 0 123356789999876 45444333
Q ss_pred eecc-CcHH---hHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecC
Q psy11600 71 MMVQ-NPQQ---WIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 71 lmv~-~p~~---~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E 139 (277)
.--. ++.+ .++.+.+.|++|+. |+.. .-...++.+++.+..|+-. +.++.+.+..-.+|.+.+-+-
T Consensus 208 an~~~~~~~A~~~~~~L~~~~i~~iE---qP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~ 284 (401)
T 3sbf_A 208 VHERLFPNQAIQFAKEVEQYKPYFIE---DILPPNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIANRRIDFIRCHVS 284 (401)
T ss_dssp CTTCSCHHHHHHHHHHHGGGCCSCEE---CSSCTTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTTCCSEECCCGG
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEE---CCCChhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcCCCCEEecCcc
Confidence 2211 2333 45677788999983 2321 1344578888887766532 565555555556899888654
No 464
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=53.29 E-value=41 Score=29.74 Aligned_cols=84 Identities=12% Similarity=0.182 Sum_probs=54.3
Q ss_pred hHHHHHhcCCCeEEEeccCCCC--------CHHHHHHHHhhC-CCcccc---------hhhhhHHHHhcCCCeEEeecCC
Q psy11600 79 WIEPMADANVDQYTFHVEPVDN--------VPQVIRQIKEAG-MKVGQV---------LQDWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 79 ~i~~l~~ag~d~i~~H~e~~d~--------g~~~i~~i~~~~-~~~~d~---------p~~~i~~~~~~g~d~it~H~E~ 140 (277)
....+.++||..+|+|.--.+| --++++.||+.+ ...+.+ +++.+..+ +..+|+.|+-...
T Consensus 39 ~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~~~Pe~asl~~gs 117 (282)
T 2y7e_A 39 EAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-ALKPEMATLNAGT 117 (282)
T ss_dssp HHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-GGCCSEEEEECCC
T ss_pred HHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-hcCCCEEEecccc
Confidence 3455678899999999865555 457888899875 334422 55566666 6778888554430
Q ss_pred ----C-------CChHHHHHHHHHhCCccceeeC
Q psy11600 141 ----V-------DNVPQVIRQIKEAGMKVGLAIK 163 (277)
Q Consensus 141 ----~-------~~~~~~~~~I~~~g~~~g~~i~ 163 (277)
+ ....+..+.+++.|.+..+.+-
T Consensus 118 ~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~f 151 (282)
T 2y7e_A 118 LNFGDDIFINHPADIIRLAEAFKQYNVVPEVEVY 151 (282)
T ss_dssp EEETTEEECCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccccccCCHHHHHHHHHHHHHcCCeEEEEEE
Confidence 0 0144667777788877777664
No 465
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=52.91 E-value=41 Score=32.87 Aligned_cols=85 Identities=13% Similarity=0.124 Sum_probs=47.8
Q ss_pred ceEeeecc---ccCcccHHHHHHHHHHcCCCEEEEecc--ccccccCC------CCCHHHHHHHHhcCCCCeeeeeeecc
Q psy11600 6 CMIGPSIL---NSDLSNLHSESQNLLDSGADYLHLDVM--DGTFVPNL------TFGHPVVKCLRNKIPKAFFETHMMVQ 74 (277)
Q Consensus 6 ~~~~~s~~---~~d~~~l~~~~~~l~~~~~~~~h~Dim--Dg~fvp~~------~~g~~~v~~l~~~~~~~~~d~Hlmv~ 74 (277)
++|+|.=+ ..+..+..+-.+.|++.|+|++|+-.- +. ..|.. .+..+.++.+|+. .++|+-+-=-+.
T Consensus 213 vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi~ 290 (671)
T 1ps9_A 213 YRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEA-RIPTIATPVPRGAFSWVTRKLKGH-VSLPLVTTNRIN 290 (671)
T ss_dssp EEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTC-SSCSSSTTSCTTTTHHHHHHHTTS-CSSCEEECSSCC
T ss_pred EEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCcccc-ccccccccCCcchHHHHHHHHHHh-cCceEEEeCCCC
Confidence 46676432 122334445567888999999887320 11 11211 1335788899986 577765433333
Q ss_pred CcHHhHHHHHhcC-CCeEEE
Q psy11600 75 NPQQWIEPMADAN-VDQYTF 93 (277)
Q Consensus 75 ~p~~~i~~l~~ag-~d~i~~ 93 (277)
+|+...+ +.+.| +|.+.+
T Consensus 291 ~~~~a~~-~l~~g~aD~V~~ 309 (671)
T 1ps9_A 291 DPQVADD-ILSRGDADMVSM 309 (671)
T ss_dssp SHHHHHH-HHHTTSCSEEEE
T ss_pred CHHHHHH-HHHcCCCCEEEe
Confidence 4555544 45555 998843
No 466
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=52.90 E-value=74 Score=25.10 Aligned_cols=84 Identities=17% Similarity=0.111 Sum_probs=51.5
Q ss_pred eeeeeeccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCC
Q psy11600 67 FETHMMVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 67 ~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~ 140 (277)
+.+.-.+.+..+.++.+.+...|.+.+.+...+ .|.++++.+|+....++-+ ...+.....++|++-+..-+-
T Consensus 38 ~~v~~~~~~~~~al~~~~~~~~dlvi~D~~~p~~~g~~~~~~l~~~~~~pii~lt~~~~~~~~~~~~~~ga~~~l~KP~- 116 (205)
T 1s8n_A 38 YEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPF- 116 (205)
T ss_dssp CEEEEEESSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCSCEEEEEEGGGHHHHHTTGGGSCEEEEEESC-
T ss_pred CEEEEEeCCHHHHHHHHhhcCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHhcCCcEEEeCCC-
Confidence 344335667777777777777888866665433 3788888888765434322 344566677889875444333
Q ss_pred CCChHHHHHHHHH
Q psy11600 141 VDNVPQVIRQIKE 153 (277)
Q Consensus 141 ~~~~~~~~~~I~~ 153 (277)
+...+...++.
T Consensus 117 --~~~~L~~~i~~ 127 (205)
T 1s8n_A 117 --SISDLIPAIEL 127 (205)
T ss_dssp --CHHHHHHHHHH
T ss_pred --CHHHHHHHHHH
Confidence 45555555554
No 467
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=52.80 E-value=66 Score=28.14 Aligned_cols=171 Identities=12% Similarity=0.085 Sum_probs=96.5
Q ss_pred cCcHHhHHHHHhcCCCeEEEeccCC--CCCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCC--Ch
Q psy11600 74 QNPQQWIEPMADANVDQYTFHVEPV--DNVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVD--NV 144 (277)
Q Consensus 74 ~~p~~~i~~l~~ag~d~i~~H~e~~--d~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~--~~ 144 (277)
.+|.+..+ +.++||..+++--|.. .|+.+.++++|+.+..|+.. -...|.+-..+|||.|-+-+..-. .+
T Consensus 64 ~dp~~iA~-~~~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l 142 (258)
T 4a29_A 64 RDPIEYAK-FMERYAVGLSITTEEKYFNGSYETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTEREL 142 (258)
T ss_dssp CCHHHHHH-HHTTTCSEEEEECCSTTTCCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHH
T ss_pred CCHHHHHH-HHhCCCeEEEEeCCCCCCCCCHHHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHH
Confidence 47777665 5578999999988864 56899999999999888744 233466667889999987664100 12
Q ss_pred HHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCC-ccEEEeCCC-C
Q psy11600 145 PQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPT-LNIEVDGGV-G 222 (277)
Q Consensus 145 ~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~-~~i~vdGgV-~ 222 (277)
.++.+..+..|+.+=+-+ . .-++++..+.. +.- ++.||--. ...| +--++.-..+.+..|. +-++--+|| +
T Consensus 143 ~~l~~~A~~lGl~~LvEV--h-~~~El~rAl~~-~a~-iIGINNRn-L~tf-~vdl~~t~~L~~~ip~~~~~VsESGI~t 215 (258)
T 4a29_A 143 ESLLEYARSYGMEPLILI--N-DENDLDIALRI-GAR-FIGIMSRD-FETG-EINKENQRKLISMIPSNVVKVAKLGISE 215 (258)
T ss_dssp HHHHHHHHHTTCCCEEEE--S-SHHHHHHHHHT-TCS-EEEECSBC-TTTC-CBCHHHHHHHHTTSCTTSEEEEEESSCC
T ss_pred HHHHHHHHHHhHHHHHhc--c-hHHHHHHHhcC-CCc-EEEEeCCC-cccc-ccCHHHHHHHHhhCCCCCEEEEcCCCCC
Confidence 344455555554422211 1 12344444432 222 23445311 1111 1123445566666664 444556777 4
Q ss_pred cCcHHHHHHccCCC---CCcccccCHHHHHHHHHh
Q psy11600 223 PNTIDECAKCLTGF---GGQKFMQDMMPKVKWLRE 254 (277)
Q Consensus 223 ~~tv~~~~~~gpg~---ggq~F~~~~~~kI~~l~~ 254 (277)
.+.+..+.++|.+. |...+... +++++|.+
T Consensus 216 ~~dv~~l~~~G~~a~LVGealmr~~--d~~~~Li~ 248 (258)
T 4a29_A 216 RNEIEELRKLGVNAFLISSSLMRNP--EKIKELIE 248 (258)
T ss_dssp HHHHHHHHHTTCCEEEECHHHHHCT--THHHHHHC
T ss_pred HHHHHHHHHCCCCEEEECHHHhCCC--cHHHHHHc
Confidence 45677778888773 44444321 35566553
No 468
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=52.63 E-value=37 Score=30.97 Aligned_cols=144 Identities=12% Similarity=0.123 Sum_probs=84.5
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHhcCCCe
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMADANVDQ 90 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ag~d~ 90 (277)
+...+.++.+++.+.|.+.+=+-+-. +++.+..+.++++|+.+ +++++-+..--. ++. ++++.+.+.|++|
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~----~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~ 237 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ----PDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVW 237 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC----SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC----CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCE
Confidence 55667778888888898886554432 23456678899999875 455443332111 233 3566677789999
Q ss_pred EEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCccce
Q psy11600 91 YTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVGL 160 (277)
Q Consensus 91 i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g~ 160 (277)
+- +... ......+.+++.+..|+-. +.++-+.+.+-.+|.|.+-+--.+-+. ++.+..++ .|+
T Consensus 238 iE---~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~----~gi 310 (393)
T 2og9_A 238 IE---EPLDAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEH----AGL 310 (393)
T ss_dssp EE---CCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHH----TTC
T ss_pred EE---CCCCcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHH----cCC
Confidence 83 3322 2466778888887666532 555555555555899887432000122 23333333 356
Q ss_pred eeCCCCCHHh
Q psy11600 161 AIKPKTPVDV 170 (277)
Q Consensus 161 ~i~p~t~~~~ 170 (277)
.+.++...+.
T Consensus 311 ~~~~h~~~~~ 320 (393)
T 2og9_A 311 MLAPHFAMEL 320 (393)
T ss_dssp EECCCSCHHH
T ss_pred EEeccCccHH
Confidence 6667766543
No 469
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=52.19 E-value=1.3e+02 Score=26.85 Aligned_cols=72 Identities=21% Similarity=0.295 Sum_probs=41.0
Q ss_pred cHHHHHHHHHHcCCCEEEEeccc-cccc-cCCCC-------CHHHHHHHHhcCCCCeeeeeeeccC--cHHhHHHH---H
Q psy11600 19 NLHSESQNLLDSGADYLHLDVMD-GTFV-PNLTF-------GHPVVKCLRNKIPKAFFETHMMVQN--PQQWIEPM---A 84 (277)
Q Consensus 19 ~l~~~~~~l~~~~~~~~h~DimD-g~fv-p~~~~-------g~~~v~~l~~~~~~~~~d~Hlmv~~--p~~~i~~l---~ 84 (277)
..-+-++.|.++|+++ ++ |.|+ |.-+| ..+.++.+++ .|+.++.+-+--.| |. .++.+ .
T Consensus 25 ~k~~ia~~L~~aGv~~-----IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~-~~~~~~~~L~r~~~~~~~-dv~~~~~a~ 97 (320)
T 3dxi_A 25 IVDAYILAMNELPIDY-----LEVGYRNKPSKEYMGKFGYTPVSVLKHLRN-ISTKKIAIMLNEKNTTPE-DLNHLLLPI 97 (320)
T ss_dssp HHHHHHHHHHTTTCCE-----EEEEECCSCCSSCCCHHHHCCHHHHHHHHH-HCCSEEEEEEEGGGCCGG-GHHHHHGGG
T ss_pred HHHHHHHHHHHhCCCE-----EEEecccCCccccccccccChHHHHHHHhh-ccCCeEEEEecCCCCChh-hHHHHHHhh
Confidence 3344556677778777 44 4444 22222 2577888887 48887776543322 22 23333 3
Q ss_pred hcCCCeEEEeccC
Q psy11600 85 DANVDQYTFHVEP 97 (277)
Q Consensus 85 ~ag~d~i~~H~e~ 97 (277)
++|+|.+.+..+.
T Consensus 98 ~~Gvd~~ri~~~~ 110 (320)
T 3dxi_A 98 IGLVDMIRIAIDP 110 (320)
T ss_dssp TTTCSEEEEEECG
T ss_pred hcCCCEEEEEecH
Confidence 4689988666433
No 470
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=51.62 E-value=62 Score=23.02 Aligned_cols=78 Identities=10% Similarity=0.057 Sum_probs=45.1
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCC-Ccccc-----hhhhhHHHHhcCCCeEEeecCCCCChH
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGM-KVGQV-----LQDWIEPMADANVDQYTFHVEPVDNVP 145 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~-~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~~ 145 (277)
+.+..+.++.+.+...|.+.+.+...+ .|.++++.+|+... .++-+ .........++|++-+..-+- +..
T Consensus 33 ~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~---~~~ 109 (126)
T 1dbw_A 33 HQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPF---EDT 109 (126)
T ss_dssp ESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSC---CHH
T ss_pred eCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCC---CHH
Confidence 455666666665556677765555322 26778888877542 23221 234556667788875554443 456
Q ss_pred HHHHHHHH
Q psy11600 146 QVIRQIKE 153 (277)
Q Consensus 146 ~~~~~I~~ 153 (277)
.+.+.++.
T Consensus 110 ~l~~~i~~ 117 (126)
T 1dbw_A 110 VIIEAIER 117 (126)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 471
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=51.56 E-value=48 Score=28.07 Aligned_cols=89 Identities=15% Similarity=0.103 Sum_probs=54.5
Q ss_pred cCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEec----cCCCCCHHHHHHHHhh----CCC-cc
Q psy11600 46 PNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFHV----EPVDNVPQVIRQIKEA----GMK-VG 116 (277)
Q Consensus 46 p~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H~----e~~d~g~~~i~~i~~~----~~~-~~ 116 (277)
|-..-|.+.++.|.+. .+...+-+..+ +.+.+ ...++|+++++.=+ |..+-|-..|+++.+. ... .+
T Consensus 86 P~T~eGl~A~~~L~~~--GI~vn~TlifS-~~Qa~-~Aa~AGa~yISPfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~i 161 (212)
T 3r8r_A 86 PMTSDGLKAVRALTDL--GIKTNVTLIFN-ANQAL-LAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQI 161 (212)
T ss_dssp ESSHHHHHHHHHHHHT--TCCEEEEEECS-HHHHH-HHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCCHHHHHHHHHHHHC--CCcEEEEEeCC-HHHHH-HHHHcCCeEEEeccchhhhcCCChHHHHHHHHHHHHHcCCCCEE
Confidence 4434477888888864 66666666554 33333 46778999997532 2223366777777664 222 11
Q ss_pred c-c---hhhhhHHHHhcCCCeEEeec
Q psy11600 117 Q-V---LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 117 d-~---p~~~i~~~~~~g~d~it~H~ 138 (277)
. . -...+.+.+.+|||.+|+.+
T Consensus 162 laAS~R~~~~v~~~a~~G~d~~Tip~ 187 (212)
T 3r8r_A 162 IAASIRHPQHVTEAALRGAHIGTMPL 187 (212)
T ss_dssp EEBSCCSHHHHHHHHHTTCSEEEECH
T ss_pred EEecCCCHHHHHHHHHcCCCEEEcCH
Confidence 1 1 33455566789999999954
No 472
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=51.39 E-value=1.4e+02 Score=27.15 Aligned_cols=141 Identities=9% Similarity=0.104 Sum_probs=83.7
Q ss_pred cccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCe--eeeeeec--cCcHHhHHHHHhcCCCeE
Q psy11600 17 LSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAF--FETHMMV--QNPQQWIEPMADANVDQY 91 (277)
Q Consensus 17 ~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~--~d~Hlmv--~~p~~~i~~l~~ag~d~i 91 (277)
...+.++.+.+.+.|...+-+.+ + | ....+.++++|+.+ ++.+ +|+|--- .+ .+.++.+.+.|++|+
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv-~----~--~~d~~~v~avR~a~G~~~~L~vDaN~~w~~~~-~~~~~~l~~~~i~~i 235 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI-K----P--GWDVEPLQETRRAVGDHFPLWTDANSSFELDQ-WETFKAMDAAKCLFH 235 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC-B----T--TBSHHHHHHHHHHHCTTSCEEEECTTCCCGGG-HHHHHHHGGGCCSCE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe-C----c--chHHHHHHHHHHhcCCCCEEEEeCCCCCCHHH-HHHHHHHHhcCCCEE
Confidence 55677777777777998877776 2 2 24568899999876 4544 3433222 22 345677777899998
Q ss_pred EEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhCCcccee
Q psy11600 92 TFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAGMKVGLA 161 (277)
Q Consensus 92 ~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g~~~g~~ 161 (277)
- |+.. .-...++++++.+..|+-. +.++.+.+..-.+|.+-+-+--.+-+. ++.+..++.|+..-.+
T Consensus 236 E---qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~ 312 (400)
T 3mwc_A 236 E---QPLHYEALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGG 312 (400)
T ss_dssp E---SCSCTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred e---CCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEec
Confidence 3 3332 2466788888887766532 555555555556899887542000122 3444455556554444
Q ss_pred eCCCCCH
Q psy11600 162 IKPKTPV 168 (277)
Q Consensus 162 i~p~t~~ 168 (277)
...++++
T Consensus 313 ~~~es~i 319 (400)
T 3mwc_A 313 TMPESGL 319 (400)
T ss_dssp CSCCCHH
T ss_pred CCCCCHH
Confidence 3444554
No 473
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=51.32 E-value=50 Score=28.62 Aligned_cols=60 Identities=7% Similarity=-0.073 Sum_probs=43.2
Q ss_pred CCCHH---HHHHHHhcC-CCCeeeeeeeccCcHHh----HHHHH-hcCCCeEEEeccCCCCCHHHHHHHHhh
Q psy11600 49 TFGHP---VVKCLRNKI-PKAFFETHMMVQNPQQW----IEPMA-DANVDQYTFHVEPVDNVPQVIRQIKEA 111 (277)
Q Consensus 49 ~~g~~---~v~~l~~~~-~~~~~d~Hlmv~~p~~~----i~~l~-~ag~d~i~~H~e~~d~g~~~i~~i~~~ 111 (277)
.+|++ .++++.+.+ +++++-.+++..|..+. .+.+. +.|+|.+|+|. -+|.+.++...+.
T Consensus 57 ~~G~~g~~~l~~l~~~~~~g~~VflDlK~~DI~nTv~~~a~~~~~~lg~d~vTvh~---~~G~~~l~~~~~~ 125 (255)
T 3qw3_A 57 FFGAEGWAALSEVIRAVPAGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASP---YMGSDSLQPFMRY 125 (255)
T ss_dssp TTTHHHHHHHHHHHHHSCTTCCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECC---TTCHHHHHHHHTC
T ss_pred hcCHHHHHHHHHHHHHhcCCCeEEEEeecCCcHHHHHHHHHHHHHHcCCCEEEEcc---cCCHHHHHHHHHh
Confidence 46876 555555422 57888899999997764 55554 58999999995 4577788777654
No 474
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=51.21 E-value=32 Score=25.20 Aligned_cols=79 Identities=5% Similarity=0.023 Sum_probs=44.1
Q ss_pred ccCcHHhHHHHHhcCCCeEEEeccCCC--C-CHHHHHHHHhhCC-Ccccc-----hhhhhHHHHhcCCCeEEeecCCCCC
Q psy11600 73 VQNPQQWIEPMADANVDQYTFHVEPVD--N-VPQVIRQIKEAGM-KVGQV-----LQDWIEPMADANVDQYTFHVEPVDN 143 (277)
Q Consensus 73 v~~p~~~i~~l~~ag~d~i~~H~e~~d--~-g~~~i~~i~~~~~-~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~ 143 (277)
+.+..+.++.+.+...|.+.+.+...+ . |.++++.+|+... .++-+ .........++|++.+-.-.- +
T Consensus 36 ~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~---~ 112 (136)
T 3kto_A 36 FASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFIEKPF---I 112 (136)
T ss_dssp ESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEEESSB---C
T ss_pred eCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHheeCCC---C
Confidence 445555555444445566655555433 2 6777888877642 23322 233455666888876555443 5
Q ss_pred hHHHHHHHHHh
Q psy11600 144 VPQVIRQIKEA 154 (277)
Q Consensus 144 ~~~~~~~I~~~ 154 (277)
...+.+.++++
T Consensus 113 ~~~l~~~i~~~ 123 (136)
T 3kto_A 113 EHVLVHDVQQI 123 (136)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 56666666653
No 475
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=51.18 E-value=21 Score=32.74 Aligned_cols=57 Identities=12% Similarity=0.162 Sum_probs=41.1
Q ss_pred CCCCHHHH-------HHHHhcCCCCeeeeeeeccCcHHhHHHHH----h-cCCCeEEEeccCCCCCHHHHHHHH
Q psy11600 48 LTFGHPVV-------KCLRNKIPKAFFETHMMVQNPQQWIEPMA----D-ANVDQYTFHVEPVDNVPQVIRQIK 109 (277)
Q Consensus 48 ~~~g~~~v-------~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~----~-ag~d~i~~H~e~~d~g~~~i~~i~ 109 (277)
..||++.+ +++|+. ++++-.+++..|..+.+..+. + .|+|++|+|.-. |...|+...
T Consensus 130 ~~~G~~gv~~L~~~i~~lk~~--g~~VflDlK~~DIgnTv~~ya~a~~~~lgaD~vTVh~~~---G~~sl~~a~ 198 (352)
T 2fds_A 130 IPYGSVGINALKNVFDYLNSM--NIPTMLDMKINDIGNTVKNYRKFIFEYLKSDSCTINVYM---GTSMLKDIC 198 (352)
T ss_dssp GGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTT---CSTTHHHHS
T ss_pred HhCCHHHHHHHHHHHHHHHHC--CCeEEEEeecCchHHHHHHHHHHHHhhcCCCEEEEeCCC---CHHHHHHHH
Confidence 35798888 677763 889999999999887655553 3 599999999643 334455543
No 476
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=51.14 E-value=50 Score=30.54 Aligned_cols=122 Identities=11% Similarity=0.095 Sum_probs=75.4
Q ss_pred ccCcccHHHHHHHHHHcCCCEEEEecccccc--ccCCCCCHHHHHHHHhcC-CCCeeeeeeec-cCcHH---hHHHHHhc
Q psy11600 14 NSDLSNLHSESQNLLDSGADYLHLDVMDGTF--VPNLTFGHPVVKCLRNKI-PKAFFETHMMV-QNPQQ---WIEPMADA 86 (277)
Q Consensus 14 ~~d~~~l~~~~~~l~~~~~~~~h~DimDg~f--vp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv-~~p~~---~i~~l~~a 86 (277)
..|...+.++.+++.+.|.+.+=+.+--|.. -..+....+.++++|+.+ ++.++-+..-- -++.+ .++.+.+.
T Consensus 177 ~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~ 256 (412)
T 3stp_A 177 AGSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPY 256 (412)
T ss_dssp SCCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 3466777788888888899987666532210 011234457789999876 45544333211 13443 46777788
Q ss_pred CCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeec
Q psy11600 87 NVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 87 g~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~ 138 (277)
|++|+- |+.. .....++++|+.+..|+-. +.++.+.+..-.+|.|-+-+
T Consensus 257 ~i~~iE---eP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~ 312 (412)
T 3stp_A 257 EPRWLE---EPVIADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDT 312 (412)
T ss_dssp CCSEEE---CCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CCCEEE---CCCCcccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecCh
Confidence 999983 3322 2467788899887776633 55555555555689988744
No 477
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=51.05 E-value=52 Score=27.57 Aligned_cols=89 Identities=9% Similarity=0.054 Sum_probs=50.3
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC--CCCe---eeeeee------ccC
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI--PKAF---FETHMM------VQN 75 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~--~~~~---~d~Hlm------v~~ 75 (277)
+|+.++... ..+.+.++.+.+.|.+.+-+-.-+....+.-.+....++++|+.. .++. +.+|.- ..+
T Consensus 3 ~~G~~~~~~--~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~ 80 (285)
T 1qtw_A 3 YIGAHVSAA--GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPV 80 (285)
T ss_dssp EEEEECCCT--TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSS
T ss_pred ceeEEeccc--cCHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCC
Confidence 466655543 579999999999999995542112111111124444555554321 3555 455631 112
Q ss_pred cH----------HhHHHHHhcCCCeEEEeccC
Q psy11600 76 PQ----------QWIEPMADANVDQYTFHVEP 97 (277)
Q Consensus 76 p~----------~~i~~l~~ag~d~i~~H~e~ 97 (277)
+. +.++...+.|+.++.+|.-.
T Consensus 81 ~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~ 112 (285)
T 1qtw_A 81 TEALEKSRDAFIDEMQRCEQLGLSLLNFHPGS 112 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEECCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEECcCC
Confidence 22 23566667899999999653
No 478
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=50.91 E-value=24 Score=30.30 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=27.7
Q ss_pred ccCHHHHHHHHHhh-CCCCeEEEeCCCCccCHHHhh
Q psy11600 242 MQDMMPKVKWLREN-YPTLNIEVDGGVGPNTIDECA 276 (277)
Q Consensus 242 ~~~~~~kI~~l~~~-~~~~~I~VDGGI~~~~~~~~~ 276 (277)
..+-++.+++|.++ ...++|.+=||||.+|++++.
T Consensus 161 a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~~Ni~~l~ 196 (224)
T 2bdq_A 161 IIENIKHIKALVEYANNRIEIMVGGGVTAENYQYIC 196 (224)
T ss_dssp GGGGHHHHHHHHHHHTTSSEEEECSSCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCHHHHHHHH
Confidence 45667788887664 356899999999999998875
No 479
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=50.74 E-value=56 Score=29.33 Aligned_cols=120 Identities=16% Similarity=0.184 Sum_probs=73.6
Q ss_pred eccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcHH---hHHHHHh
Q psy11600 11 SILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQQ---WIEPMAD 85 (277)
Q Consensus 11 s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~~---~i~~l~~ 85 (277)
++...+...+.++.+.+.+.|...+-+.+-.. + .-..+.++++|+.+ +++++-+..--. ++.+ +++.+.+
T Consensus 134 ~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~---~--~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~ 208 (354)
T 3jva_A 134 TLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG---I--EADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALAD 208 (354)
T ss_dssp EECSCCHHHHHHHHHHHHHTTCSEEEEECCSC---H--HHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTT
T ss_pred EeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC---H--HHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 33334666777788888888999977766211 1 22357788999876 555443332111 3443 4556666
Q ss_pred cCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeec
Q psy11600 86 ANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 86 ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~ 138 (277)
.|++|+. |+.. ......+.+++.+..|+-. +.++.+.+..-.+|.+.+-+
T Consensus 209 ~~i~~iE---qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 265 (354)
T 3jva_A 209 YQIELVE---QPVKRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKL 265 (354)
T ss_dssp SCEEEEE---CCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred cCCCEEE---CCCChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 6777773 3332 2456788888887766532 56665555666789988854
No 480
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=50.61 E-value=82 Score=25.64 Aligned_cols=80 Identities=9% Similarity=0.051 Sum_probs=50.5
Q ss_pred eccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCCCChH
Q psy11600 72 MVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPVDNVP 145 (277)
Q Consensus 72 mv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~~ 145 (277)
.+.+..+.++.+.+...|.+.+.+...+ .|..+++.+|+....++-+ ....+....++||+-+..-.- +..
T Consensus 34 ~~~~~~~al~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~---~~~ 110 (238)
T 2gwr_A 34 VIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPF---KPK 110 (238)
T ss_dssp EECCGGGHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEETTCCSCHHHHHHTTCCEEEEESC---CHH
T ss_pred EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHCCCCEEEeCCC---CHH
Confidence 3556666666666667787766665432 2777888888764333322 234556677889876655544 567
Q ss_pred HHHHHHHHh
Q psy11600 146 QVIRQIKEA 154 (277)
Q Consensus 146 ~~~~~I~~~ 154 (277)
.+...++..
T Consensus 111 ~L~~~i~~~ 119 (238)
T 2gwr_A 111 ELVARVRAR 119 (238)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777778765
No 481
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=50.46 E-value=46 Score=30.13 Aligned_cols=66 Identities=20% Similarity=0.282 Sum_probs=43.6
Q ss_pred HHHHHHHHc--CCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEE
Q psy11600 22 SESQNLLDS--GADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTF 93 (277)
Q Consensus 22 ~~~~~l~~~--~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~ 93 (277)
+.++.+.+. |++.+-+|..-|.. ..-.+.++++|+.+|++++-+.- +.++ +..+.+.++|+|.|.+
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~----~~~~~~i~~lr~~~~~~~vi~g~-v~t~-e~A~~a~~aGaD~I~v 188 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYS----EHFVEFVKDVRKRFPQHTIMAGN-VVTG-EMVEELILSGADIIKV 188 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTB----HHHHHHHHHHHHHCTTSEEEEEE-ECSH-HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhccCCCCEEEEEecCCCc----HHHHHHHHHHHHhcCCCeEEEEe-CCCH-HHHHHHHHhCCCEEEE
Confidence 455666665 78887666533311 11236799999987788877652 4454 4677889999999844
No 482
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=50.19 E-value=77 Score=29.34 Aligned_cols=127 Identities=14% Similarity=0.178 Sum_probs=77.2
Q ss_pred eeccccCcccHHHHHHHHHHcCCCEEEEeccc-ccc----------ccC--------CCCCHHHHHHHHhcC-CCCeeee
Q psy11600 10 PSILNSDLSNLHSESQNLLDSGADYLHLDVMD-GTF----------VPN--------LTFGHPVVKCLRNKI-PKAFFET 69 (277)
Q Consensus 10 ~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimD-g~f----------vp~--------~~~g~~~v~~l~~~~-~~~~~d~ 69 (277)
.++...+...+.++.+.+.+.|...+=+.+-- +.- -|. +.+-.+.++++|+.+ ++.++-+
T Consensus 148 ~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~v 227 (422)
T 3tji_A 148 SHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILH 227 (422)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34444567778888888888899998887732 100 011 123356789999876 4544433
Q ss_pred eeecc-CcHH---hHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeec
Q psy11600 70 HMMVQ-NPQQ---WIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 70 Hlmv~-~p~~---~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~ 138 (277)
..--. ++.+ .++.+.+.|++|+- |+.. .....++++++.+..|+-. +.++.+.+..-.+|.+.+-+
T Consensus 228 DaN~~~~~~~A~~~~~~Le~~~i~~iE---qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~ 304 (422)
T 3tji_A 228 DVHERLFPQQAVQLAKQLEPFQPYFIE---DILPPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIVNRRIDFIRCHV 304 (422)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGCCSEEE---CCSCGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCG
T ss_pred ECCCCCCHHHHHHHHHHHHhhCCCeEE---CCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEecCc
Confidence 32111 3433 35677778999883 3322 1234578888887766532 66666655556689998866
Q ss_pred C
Q psy11600 139 E 139 (277)
Q Consensus 139 E 139 (277)
-
T Consensus 305 ~ 305 (422)
T 3tji_A 305 S 305 (422)
T ss_dssp G
T ss_pred c
Confidence 4
No 483
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=50.12 E-value=1.4e+02 Score=26.45 Aligned_cols=119 Identities=15% Similarity=0.140 Sum_probs=0.0
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCH----------HHHHHHHhc-----CCCCeeeeeeecc------
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGH----------PVVKCLRNK-----IPKAFFETHMMVQ------ 74 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~----------~~v~~l~~~-----~~~~~~d~Hlmv~------ 74 (277)
+..+..+.++++++.|+..+|+. |+.+.|-.+.-. +.+..+|.. .++..+-+---..
T Consensus 92 ~~~~v~~~v~~l~~aGaagv~iE--D~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 169 (295)
T 1s2w_A 92 NFNNARRLVRKLEDRGVAGACLE--DKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGL 169 (295)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE--CBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEC--CCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccH
Q ss_pred -CcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCC--Ccccc-----hhhhhHHHHhcCCCeEEeec
Q psy11600 75 -NPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGM--KVGQV-----LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 75 -~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~--~~~d~-----p~~~i~~~~~~g~d~it~H~ 138 (277)
...+-...+.++|||.+.++.-..+ .+.++.+.+.-. .|.-+ +..=+++|.+.|+.++++..
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e~~~~~--~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~ 239 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMHSKKAD--PSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWAN 239 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSSS--SHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCC--HHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEECh
No 484
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=49.94 E-value=1.6e+02 Score=27.16 Aligned_cols=126 Identities=13% Similarity=0.186 Sum_probs=77.8
Q ss_pred eccccCcccHHHHHHHHHHcCCCEEEEeccc-------cc------cc------cC---------CCCCHHHHHHHHhcC
Q psy11600 11 SILNSDLSNLHSESQNLLDSGADYLHLDVMD-------GT------FV------PN---------LTFGHPVVKCLRNKI 62 (277)
Q Consensus 11 s~~~~d~~~l~~~~~~l~~~~~~~~h~DimD-------g~------fv------p~---------~~~g~~~v~~l~~~~ 62 (277)
++...+...+.++.+.+.+.|...+=+.+-- |. |- |. +..-.+.++++|+.+
T Consensus 144 ~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~av 223 (424)
T 3v3w_A 144 HANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEF 223 (424)
T ss_dssp EEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHc
Confidence 4444567778888888888899999888742 00 11 11 122356789999876
Q ss_pred -CCCeeeeeeecc-CcHH---hHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcC
Q psy11600 63 -PKAFFETHMMVQ-NPQQ---WIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADAN 130 (277)
Q Consensus 63 -~~~~~d~Hlmv~-~p~~---~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g 130 (277)
++.++-+..--. ++.+ .++.+.+.|++|+. ++.. .-...++++++.+..|+-. +.++.+.+..-.
T Consensus 224 G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE---qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga 300 (424)
T 3v3w_A 224 GPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWME---DAVPAENQESFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQW 300 (424)
T ss_dssp CSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE---CCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTC
T ss_pred CCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE---CCCChHhHHHHHHHHhhCCCCEEEccCcCCHHHHHHHHHcCC
Confidence 455544432211 2333 46677788999983 2321 1344678888888776632 666655555556
Q ss_pred CCeEEeecC
Q psy11600 131 VDQYTFHVE 139 (277)
Q Consensus 131 ~d~it~H~E 139 (277)
+|.+.+-+-
T Consensus 301 ~d~v~~k~~ 309 (424)
T 3v3w_A 301 IDYIRTTIV 309 (424)
T ss_dssp CSEECCCTT
T ss_pred CCeEeecch
Confidence 899988764
No 485
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=49.52 E-value=1.3e+02 Score=25.91 Aligned_cols=155 Identities=13% Similarity=0.137 Sum_probs=0.0
Q ss_pred cCcHHhHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc----------------hhhhhHHHHhcCCCeEEee
Q psy11600 74 QNPQQWIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV----------------LQDWIEPMADANVDQYTFH 137 (277)
Q Consensus 74 ~~p~~~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~----------------p~~~i~~~~~~g~d~it~H 137 (277)
.++.+.++...+.|++.+.+| |.+++..+ .....+-+ ...-++...+.||+.|-+|
T Consensus 41 ~di~~~~~~a~~~~~~av~v~-------~~~v~~~~-~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~v~~~ 112 (263)
T 1w8s_A 41 ADPEYILRLARDAGFDGVVFQ-------RGIAEKYY-DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASAVGYT 112 (263)
T ss_dssp GCHHHHHHHHHHHTCSEEEEC-------HHHHHHHC-CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSEEEEE
T ss_pred hhHHHHHHHHHhhCCCEEEEC-------HHHHHHhh-cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCEEEEE
Q ss_pred c----CCCCChHHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhhCCCc
Q psy11600 138 V----EPVDNVPQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLRENYPTL 213 (277)
Q Consensus 138 ~----E~~~~~~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~~~~~ 213 (277)
. + +....++.+++ +.+.++..++.+++-..|+ |+.+-... .-+.+
T Consensus 113 ~nig~~---~~~~~~~~~~~-----------------v~~~~~~~~~~vIi~~~~~--G~~~~~~~--s~~~i------- 161 (263)
T 1w8s_A 113 IYPGSG---FEWKMFEELAR-----------------IKRDAVKFDLPLVVESFPR--GGKVVNET--APEIV------- 161 (263)
T ss_dssp ECTTST---THHHHHHHHHH-----------------HHHHHHHHTCCEEEEECCC--STTCCCTT--CHHHH-------
T ss_pred EecCCc---CHHHHHHHHHH-----------------HHHHHHHcCCeEEEEeeCC--CCccccCC--CHHHH-------
Q ss_pred cEEEeCCCCcCcHHHHHHccCCCCCcccccCHHHHHHHHHhhCCCCeEEEeCCCCccCHHHhhC
Q psy11600 214 NIEVDGGVGPNTIDECAKCLTGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAK 277 (277)
Q Consensus 214 ~i~vdGgV~~~tv~~~~~~gpg~ggq~F~~~~~~kI~~l~~~~~~~~I~VDGGI~~~~~~~~~~ 277 (277)
....+...++|++|=+-.| +...+.++++++..+..-+-+=|||+.+|...+.+
T Consensus 162 ---------~~a~~~a~~~GAD~vkt~~-~~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~ 215 (263)
T 1w8s_A 162 ---------AYAARIALELGADAMKIKY-TGDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLK 215 (263)
T ss_dssp ---------HHHHHHHHHHTCSEEEEEC-CSSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHH
T ss_pred ---------HHHHHHHHHcCCCEEEEcC-CCCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHH
No 486
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=49.46 E-value=85 Score=29.57 Aligned_cols=150 Identities=12% Similarity=0.127 Sum_probs=0.0
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHH---------HHHHHHhcCCCCeeeeeeeccCcHHh-HHHHH
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHP---------VVKCLRNKIPKAFFETHMMVQNPQQW-IEPMA 84 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~---------~v~~l~~~~~~~~~d~Hlmv~~p~~~-i~~l~ 84 (277)
.|....-+..+++.+.|+|. +||-=-.--|+-..=.. +|+.+++.+++.+.++-+.+...... ++...
T Consensus 209 ~~~~~al~~A~~mv~~GAdI--IDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL 286 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEI--IDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKIL 286 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSE--EEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCE--EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHH
Q ss_pred h--cCCCe-EEEeccCCCCCHHHHHHHHhhCCCcccchhhhhHHHHhcCCCeEEeecCCCCC-----------------h
Q psy11600 85 D--ANVDQ-YTFHVEPVDNVPQVIRQIKEAGMKVGQVLQDWIEPMADANVDQYTFHVEPVDN-----------------V 144 (277)
Q Consensus 85 ~--ag~d~-i~~H~e~~d~g~~~i~~i~~~~~~~~d~p~~~i~~~~~~g~d~it~H~E~~~~-----------------~ 144 (277)
+ +|+++ |- .+-... -.+.++..+++|+.+|.+|.. . .
T Consensus 287 ~~~aGa~i~IN-DVsg~~-------------------d~~m~~v~a~~g~~vVlMh~~---G~P~tmq~~~y~dvv~ev~ 343 (442)
T 3mcm_A 287 AKHHDIIWMIN-DVECNN-------------------IEQKAQLIAKYNKKYVIIHNL---GITDRNQYLDKENAIDNVC 343 (442)
T ss_dssp HHHGGGCCEEE-ECCCTT-------------------HHHHHHHHHHHTCEEEEECC-------------------CTHH
T ss_pred hhCCCCCEEEE-cCCCCC-------------------ChHHHHHHHHhCCeEEEECCC---CCCccccccCcccHHHHHH
Q ss_pred HHHHHHHHHhCCccceeeCCCCCHHhHHHHHhhcCceEEEEecCCCCCchhhhhhhhhHHHHHhh
Q psy11600 145 PQVIRQIKEAGMKVGLAIKPKTPVDVIAEYIESADLVLIMTVEPGFGGQKFMQDMMPKVKWLREN 209 (277)
Q Consensus 145 ~~~~~~I~~~g~~~g~~i~p~t~~~~i~~~i~~~d~vl~mav~Pgt~gq~~~~~~l~kI~~l~~~ 209 (277)
..+.+.++.+ ...|+.+.- +.+.||++-.+-.+.-++.++.+..+
T Consensus 344 ~~l~~~i~~a---~~aGI~~~~-----------------IilDPGiGF~Kt~~~nl~lL~~l~~l 388 (442)
T 3mcm_A 344 DYIEQKKQIL---LKHGIAQQN-----------------IYFDIGFGFGKKSDTARYLLENIIEI 388 (442)
T ss_dssp HHHHHHHHHH---HHHTCCGGG-----------------EEEECCCC------------CCHHHH
T ss_pred HHHHHHHHHH---HHcCCCHHH-----------------EEEeCCCCCCCCHHHHHHHHHHHHHH
No 487
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=49.42 E-value=61 Score=26.08 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=51.3
Q ss_pred eeeeeccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc-----hhhhhHHHHhcCCCeEEeecCCC
Q psy11600 68 ETHMMVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV-----LQDWIEPMADANVDQYTFHVEPV 141 (277)
Q Consensus 68 d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~ 141 (277)
.+. .+.+..+.++.+.+...|.+.+.+...+ .|.++++.+|+....++-+ .........++||+-+..-.-
T Consensus 30 ~v~-~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~-- 106 (230)
T 2oqr_A 30 EAT-VVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPY-- 106 (230)
T ss_dssp EEE-EECSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHHHHHHHHHHHHCCSCCCCSSC--
T ss_pred EEE-EECCHHHHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCcHHHHHHHHHcCCCEEEeCCC--
Confidence 443 4567777777777777888876665433 2788888888864333322 233455666788865544433
Q ss_pred CChHHHHHHHHHh
Q psy11600 142 DNVPQVIRQIKEA 154 (277)
Q Consensus 142 ~~~~~~~~~I~~~ 154 (277)
+...+...++.+
T Consensus 107 -~~~~l~~~i~~~ 118 (230)
T 2oqr_A 107 -SARELIARIRAV 118 (230)
T ss_dssp -CHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHH
Confidence 566677777654
No 488
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=49.29 E-value=42 Score=27.99 Aligned_cols=75 Identities=11% Similarity=0.116 Sum_probs=60.0
Q ss_pred eEeeeccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhc
Q psy11600 7 MIGPSILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADA 86 (277)
Q Consensus 7 ~~~~s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~a 86 (277)
...+-++-.|-..++..++.+++..-|. +-+|-| + -|++++++++. ++.|+-+.=.+.+.++ ++...++
T Consensus 103 ~tIqR~FliDS~al~~~~~~i~~~~PD~--iEiLPG-----i--~p~iI~~i~~~-~~~PiIaGGlI~~~ed-v~~al~a 171 (192)
T 3kts_A 103 LAIQRLFMIDSSAYNKGVALIQKVQPDC--IELLPG-----I--IPEQVQKMTQK-LHIPVIAGGLIETSEQ-VNQVIAS 171 (192)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCSE--EEEECT-----T--CHHHHHHHHHH-HCCCEEEESSCCSHHH-HHHHHTT
T ss_pred eEEEEEEEEEcchHHHHHHHHhhcCCCE--EEECCc-----h--hHHHHHHHHHh-cCCCEEEECCcCCHHH-HHHHHHc
Confidence 3445667788889999999999998888 566644 2 37899999987 8999999999988875 4556778
Q ss_pred CCCeEE
Q psy11600 87 NVDQYT 92 (277)
Q Consensus 87 g~d~i~ 92 (277)
||+.++
T Consensus 172 GA~aVs 177 (192)
T 3kts_A 172 GAIAVT 177 (192)
T ss_dssp TEEEEE
T ss_pred CCeEEE
Confidence 999884
No 489
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=49.21 E-value=84 Score=25.01 Aligned_cols=82 Identities=7% Similarity=0.111 Sum_probs=52.9
Q ss_pred eeeeeccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCC-Ccccc-----hhhhhHHHHhcCCCeEEeecCC
Q psy11600 68 ETHMMVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGM-KVGQV-----LQDWIEPMADANVDQYTFHVEP 140 (277)
Q Consensus 68 d~Hlmv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~-~~~d~-----p~~~i~~~~~~g~d~it~H~E~ 140 (277)
.+. -+.+..+.++.+.+...|.+.+.+...+ .|.++++.+|+... .++-+ ...++....++|++-+..-.-
T Consensus 28 ~v~-~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~- 105 (225)
T 1kgs_A 28 TVD-VCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPF- 105 (225)
T ss_dssp EEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSC-
T ss_pred EEE-EECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEEEeCCC-
Confidence 443 4567777777777778888877765433 37888999988642 23322 344666677889876655544
Q ss_pred CCChHHHHHHHHH
Q psy11600 141 VDNVPQVIRQIKE 153 (277)
Q Consensus 141 ~~~~~~~~~~I~~ 153 (277)
+...+...++.
T Consensus 106 --~~~~l~~~i~~ 116 (225)
T 1kgs_A 106 --DLRELIARVRA 116 (225)
T ss_dssp --CHHHHHHHHHH
T ss_pred --CHHHHHHHHHH
Confidence 56666666654
No 490
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=49.20 E-value=65 Score=22.55 Aligned_cols=79 Identities=14% Similarity=0.134 Sum_probs=46.1
Q ss_pred eccCcHHhHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCC-Ccccc-----hhhhhHHHHhcCCCeEEeecCCCCCh
Q psy11600 72 MVQNPQQWIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGM-KVGQV-----LQDWIEPMADANVDQYTFHVEPVDNV 144 (277)
Q Consensus 72 mv~~p~~~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~-~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~ 144 (277)
.+.+..+.++.+.+...|.+.+.+...+ .|.++++.+|+... .++-+ .........++|++-+..-+- +.
T Consensus 32 ~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~---~~ 108 (120)
T 1tmy_A 32 EATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPF---QP 108 (120)
T ss_dssp EESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSC---CH
T ss_pred EECCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcceeEeCCC---CH
Confidence 4556666677776667777766655322 26778888877542 22211 233455666788875544443 45
Q ss_pred HHHHHHHHH
Q psy11600 145 PQVIRQIKE 153 (277)
Q Consensus 145 ~~~~~~I~~ 153 (277)
..+.+.+++
T Consensus 109 ~~l~~~i~~ 117 (120)
T 1tmy_A 109 SRVVEALNK 117 (120)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 566665554
No 491
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=49.00 E-value=87 Score=30.35 Aligned_cols=108 Identities=12% Similarity=0.203 Sum_probs=70.1
Q ss_pred HHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeeeccC---------cHHhHHHHHhcCCCeE
Q psy11600 21 HSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMMVQN---------PQQWIEPMADANVDQY 91 (277)
Q Consensus 21 ~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlmv~~---------p~~~i~~l~~ag~d~i 91 (277)
.++++.|.+.|+|.+-+- .+|++.---..+..+++.++++|+-+.+-+.+ +++.+..+...|++.+
T Consensus 129 ~~qi~~l~~~gvD~l~~E-----T~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~~~~~av 203 (566)
T 1q7z_A 129 RETVEIMVEEGVDGIIFE-----TFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDAL 203 (566)
T ss_dssp HHHHHHHHHTTCSEEEEE-----EECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHTSSCSEE
T ss_pred HHHHHHHHhCCCCEEEEe-----ccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhccCCCEE
Confidence 466777888999986543 23444444456777787668899888887642 5556788888888888
Q ss_pred EEeccCCCC---CHHHHHHHHhhCCCcccc-------------------hh---hhhHHHHhcCCCeEE
Q psy11600 92 TFHVEPVDN---VPQVIRQIKEAGMKVGQV-------------------LQ---DWIEPMADANVDQYT 135 (277)
Q Consensus 92 ~~H~e~~d~---g~~~i~~i~~~~~~~~d~-------------------p~---~~i~~~~~~g~d~it 135 (277)
-+- ...+ -...++.+++.+..++-+ |+ +|++.+.+.|+.+|.
T Consensus 204 G~N--C~~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~G~~iiG 270 (566)
T 1q7z_A 204 GIN--CSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYELGVNIFG 270 (566)
T ss_dssp EEE--SSSCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHTTCSEEC
T ss_pred EEe--CCCCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHcCCcEEc
Confidence 443 3222 445666676665544422 43 456677888887765
No 492
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=48.70 E-value=1.3e+02 Score=25.71 Aligned_cols=86 Identities=5% Similarity=-0.050 Sum_probs=47.2
Q ss_pred ceEeeeccccC----cccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcCCCCeeeeeee------cc-
Q psy11600 6 CMIGPSILNSD----LSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIPKAFFETHMM------VQ- 74 (277)
Q Consensus 6 ~~~~~s~~~~d----~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~~~~~~d~Hlm------v~- 74 (277)
++|+.+.++.- ...+.+ ++.+.+.|.+.+-+-.-+.... .....+.++++.+. .++.+..|.- ..
T Consensus 21 mklg~~~~~~~~~~~~~~l~~-l~~~~~~G~~~vEl~~~~~~~~--~~~~~~~l~~~l~~-~gl~i~~~~~~~~~~~l~~ 96 (309)
T 2hk0_A 21 MKHGIYYSYWEHEWSAKFGPY-IEKVAKLGFDIIEVAAHHINEY--SDAELATIRKSAKD-NGIILTAGIGPSKTKNLSS 96 (309)
T ss_dssp CEEEEEGGGGCSCTTSCSHHH-HHHHHHTTCSEEEEEHHHHTTS--CHHHHHHHHHHHHH-TTCEEEEECCCCSSSCSSC
T ss_pred ceeEEehhhcccccccccHHH-HHHHHHhCCCEEEeccCCcccc--chhhHHHHHHHHHH-cCCeEEEecCCCCCCCCCC
Confidence 56777776653 257889 9999999999955543321110 00122333333333 4677766532 11
Q ss_pred -Cc----------HHhHHHHHhcCCCeEEEec
Q psy11600 75 -NP----------QQWIEPMADANVDQYTFHV 95 (277)
Q Consensus 75 -~p----------~~~i~~l~~ag~d~i~~H~ 95 (277)
++ .+.++...+.|+.++..|.
T Consensus 97 ~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~ 128 (309)
T 2hk0_A 97 EDAAVRAAGKAFFERTLSNVAKLDIHTIGGAL 128 (309)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEeec
Confidence 22 1235555567888886553
No 493
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=48.68 E-value=38 Score=32.14 Aligned_cols=25 Identities=16% Similarity=0.438 Sum_probs=19.7
Q ss_pred CcHHhHHHHHhcCCCeEEEeccCCC
Q psy11600 75 NPQQWIEPMADANVDQYTFHVEPVD 99 (277)
Q Consensus 75 ~p~~~i~~l~~ag~d~i~~H~e~~d 99 (277)
||.++++.+.++|+.++.+=..-.|
T Consensus 55 d~~~w~~~~k~aGaky~v~takHHd 79 (469)
T 3eyp_A 55 DCRQWMQTLKAAGIPAAILTAKHAD 79 (469)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEECTT
T ss_pred CHHHHHHHHHHcCCCEEEEEEEeCC
Confidence 7899999999999999866433333
No 494
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=48.67 E-value=1.4e+02 Score=27.04 Aligned_cols=131 Identities=12% Similarity=0.087 Sum_probs=78.1
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHh--cCC
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMAD--ANV 88 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~--ag~ 88 (277)
+...+.++.+++.+.|.+.+=+.+-+ +++.+..+.++++|+.+ +++++-+..--. ++. ++++.+.+ .++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~----~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i 220 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH----RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDL 220 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC----SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC----CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCc
Confidence 56667777888888898886655432 33445678899999876 454443332111 233 35677778 677
Q ss_pred CeEEEeccCC-CCCHHHHHHHHhhC-CCcccc-----hhhhhHHHHhcCCCeEEeecCCCCChHHHH---HHHHHhCCc
Q psy11600 89 DQYTFHVEPV-DNVPQVIRQIKEAG-MKVGQV-----LQDWIEPMADANVDQYTFHVEPVDNVPQVI---RQIKEAGMK 157 (277)
Q Consensus 89 d~i~~H~e~~-d~g~~~i~~i~~~~-~~~~d~-----p~~~i~~~~~~g~d~it~H~E~~~~~~~~~---~~I~~~g~~ 157 (277)
+|+- +.. .......+++++.+ ..|+-. +.++-+.+..-.+|.+.+- . .+.... +..++.|+.
T Consensus 221 ~~iE---qP~~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik-G---Git~a~~i~~~A~~~gi~ 292 (389)
T 2oz8_A 221 LWVE---DPILRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH-G---QVTDVMRIGWLAAELGIP 292 (389)
T ss_dssp SEEE---SCBCTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC-S---CHHHHHHHHHHHHHHTCC
T ss_pred eEEe---CCCCCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC-c---CHHHHHHHHHHHHHcCCe
Confidence 7762 322 22466788888877 655422 4444444444458999887 4 555444 444444433
No 495
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=48.60 E-value=1.4e+02 Score=26.39 Aligned_cols=69 Identities=14% Similarity=0.286 Sum_probs=39.4
Q ss_pred HHHHHHHHcCCCEEEEeccc---cc-cccCCC---CCHHHHHHHHhcCCCCeeeeeeeccCcHHhHHHHHhcCCCeEEEe
Q psy11600 22 SESQNLLDSGADYLHLDVMD---GT-FVPNLT---FGHPVVKCLRNKIPKAFFETHMMVQNPQQWIEPMADANVDQYTFH 94 (277)
Q Consensus 22 ~~~~~l~~~~~~~~h~DimD---g~-fvp~~~---~g~~~v~~l~~~~~~~~~d~Hlmv~~p~~~i~~l~~ag~d~i~~H 94 (277)
+.++...++|+|. +-|.| |. +.+.=. |..+.++++-+.+.+.++ .|. ..+-...++.+.+.|+|.+.++
T Consensus 194 ~~~~~qi~aGad~--i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~i-ih~-~g~~~~~l~~~~~~g~d~i~~d 269 (348)
T 4ay7_A 194 IYANAMVEAGADV--IAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSVTV-LHI-CGNVNPILSDMADCGFEGLSVE 269 (348)
T ss_dssp HHHHHHHHHTCSE--EEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEEE-EEC-CSCCHHHHHHHHTSCCSEEECC
T ss_pred HHHHHHHhcCCCc--ceeeccccccccCCHHHHHHHhhHHHHHHHhhccCCcE-EEe-cCCcHHHHHHHHHhcccccccc
Confidence 3455556789999 45566 21 211111 222334444444444443 443 4567778999999999998544
No 496
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=48.47 E-value=1.1e+02 Score=27.41 Aligned_cols=150 Identities=11% Similarity=0.162 Sum_probs=86.4
Q ss_pred eccccCcccHHHHHHHHHHcCCCEEEEeccccccccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcH---HhHHHHHh
Q psy11600 11 SILNSDLSNLHSESQNLLDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQ---QWIEPMAD 85 (277)
Q Consensus 11 s~~~~d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~---~~i~~l~~ 85 (277)
++...+...+.++.+.+.+.|...+-+.+-- +..-..+.++++|+.+ ++.++-+..--. ++. +.++.+.+
T Consensus 135 ~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~-----~~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~ 209 (368)
T 3q45_A 135 TVSIDEPHKMAADAVQIKKNGFEIIKVKVGG-----SKELDVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEP 209 (368)
T ss_dssp EECSCCHHHHHHHHHHHHHTTCSEEEEECCS-----CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGG
T ss_pred EecCCCHHHHHHHHHHHHHcCCCeEEEEecC-----CHHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhh
Confidence 3444566677778888778899997777621 1123457788999876 454443331111 233 34677777
Q ss_pred cCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecCCCCChH---HHHHHHHHhC
Q psy11600 86 ANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVEPVDNVP---QVIRQIKEAG 155 (277)
Q Consensus 86 ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E~~~~~~---~~~~~I~~~g 155 (277)
.|++|+- |+.. ......+.+++.+..|+-. +.++.+.+..-.+|.+-+-+--.+-+. ++.+..++.|
T Consensus 210 ~~i~~iE---qP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g 286 (368)
T 3q45_A 210 YNIQHCE---EPVSRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAH 286 (368)
T ss_dssp GCCSCEE---CCBCGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTT
T ss_pred cCCCEEE---CCCChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcC
Confidence 8999983 3322 1234577888887666532 565556556667899988764211222 3444555555
Q ss_pred CccceeeCCCCCH
Q psy11600 156 MKVGLAIKPKTPV 168 (277)
Q Consensus 156 ~~~g~~i~p~t~~ 168 (277)
+..-.+...++++
T Consensus 287 i~~~~~~~~es~i 299 (368)
T 3q45_A 287 MPVQVGGFLESRL 299 (368)
T ss_dssp CCEEECCSSCCHH
T ss_pred CcEEecCccccHH
Confidence 5544443334444
No 497
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=48.39 E-value=53 Score=28.66 Aligned_cols=74 Identities=15% Similarity=0.281 Sum_probs=49.1
Q ss_pred HHHHHHHHHcC--CCEEEEeccccc------cccCCCC--CHHHHHHHHhcCCCCeeeeeeeccCcHH-------hHHHH
Q psy11600 21 HSESQNLLDSG--ADYLHLDVMDGT------FVPNLTF--GHPVVKCLRNKIPKAFFETHMMVQNPQQ-------WIEPM 83 (277)
Q Consensus 21 ~~~~~~l~~~~--~~~~h~DimDg~------fvp~~~~--g~~~v~~l~~~~~~~~~d~Hlmv~~p~~-------~i~~l 83 (277)
.+.++.+.+.| ++++|+.+--|+ .-...++ -.+.++.+|+.++++.+.+++|+.-|.+ .++.+
T Consensus 101 ~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~~~IvG~PgEt~ed~~~t~~~l 180 (304)
T 2qgq_A 101 EEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFV 180 (304)
T ss_dssp HHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 35577888888 899998764432 1111122 1256677787678888999999876654 35566
Q ss_pred HhcCCCeEEEe
Q psy11600 84 ADANVDQYTFH 94 (277)
Q Consensus 84 ~~ag~d~i~~H 94 (277)
.+.+.+.++++
T Consensus 181 ~~l~~~~v~~~ 191 (304)
T 2qgq_A 181 EEIQFDKLGAF 191 (304)
T ss_dssp HHHCCSEEEEE
T ss_pred HHcCCCEEEEE
Confidence 67788888655
No 498
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=48.39 E-value=77 Score=28.52 Aligned_cols=79 Identities=20% Similarity=0.294 Sum_probs=55.3
Q ss_pred cCcccHHHHHHHH-----HHcCCCEEEEec--------cccccccCCC-C--CHH-HHHHHHhcCCCCeeeeeeecc---
Q psy11600 15 SDLSNLHSESQNL-----LDSGADYLHLDV--------MDGTFVPNLT-F--GHP-VVKCLRNKIPKAFFETHMMVQ--- 74 (277)
Q Consensus 15 ~d~~~l~~~~~~l-----~~~~~~~~h~Di--------mDg~fvp~~~-~--g~~-~v~~l~~~~~~~~~d~Hlmv~--- 74 (277)
.|...+.+.++.+ .+.|.+++.+|- -+|.+.|+-. | |.+ ++++++++ .+.+=++....
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~--Glk~Giw~~~~~~~ 100 (362)
T 1uas_A 23 INEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAK--GLKLGIYSDAGSQT 100 (362)
T ss_dssp CCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHT--TCEEEEEEESSSBC
T ss_pred CCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHC--CCEeEEEeeCCCcc
Confidence 3455666777777 788999999995 2378888744 6 664 46677764 77777776653
Q ss_pred ----------CcHHhHHHHHhcCCCeEEEec
Q psy11600 75 ----------NPQQWIEPMADANVDQYTFHV 95 (277)
Q Consensus 75 ----------~p~~~i~~l~~ag~d~i~~H~ 95 (277)
+.++..+.+.+.|+|+|=+.+
T Consensus 101 ~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~ 131 (362)
T 1uas_A 101 CSNKMPGSLDHEEQDVKTFASWGVDYLKYDN 131 (362)
T ss_dssp TTSSSBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCCCchhHHHHHHHHHHHcCCCEEEECc
Confidence 224467888999999995554
No 499
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=48.33 E-value=1.4e+02 Score=26.23 Aligned_cols=118 Identities=13% Similarity=-0.023 Sum_probs=71.0
Q ss_pred CcccHHHHHHHHHHcCCCEEEEeccccccccCC------CC----CHHHHHHHHhcC--CCCeeeeeeec--c---CcHH
Q psy11600 16 DLSNLHSESQNLLDSGADYLHLDVMDGTFVPNL------TF----GHPVVKCLRNKI--PKAFFETHMMV--Q---NPQQ 78 (277)
Q Consensus 16 d~~~l~~~~~~l~~~~~~~~h~DimDg~fvp~~------~~----g~~~v~~l~~~~--~~~~~d~Hlmv--~---~p~~ 78 (277)
+..+..+.+++++++|+..+|+ -|+.+-+-- -. -.+.|+.+++.- +++.+-+---. . ...+
T Consensus 95 ~~~~~~~~v~~l~~aGa~gv~i--ED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~ 172 (287)
T 3b8i_A 95 NALNVMRTVVELERAGIAALTI--EDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQ 172 (287)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEE--ECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEE--cCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHH
Confidence 4445667788899999999775 476541110 01 124455555431 23333221111 1 1222
Q ss_pred hHHHHHhcCCCeEEEeccCCCCCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeec
Q psy11600 79 WIEPMADANVDQYTFHVEPVDNVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHV 138 (277)
Q Consensus 79 ~i~~l~~ag~d~i~~H~e~~d~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~ 138 (277)
-.+.+.++|||.+.++. .. ..+.++.+.+.-..|.-+ |.--.++|.+.|+..+++..
T Consensus 173 Ra~ay~eAGAd~i~~e~--~~-~~~~~~~i~~~~~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~ 235 (287)
T 3b8i_A 173 RTLAYQEAGADGICLVG--VR-DFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLGVRVVVNGH 235 (287)
T ss_dssp HHHHHHHTTCSEEEEEC--CC-SHHHHHHHHTTCCSCEEEECTTCGGGCCHHHHHHTTEEEEECCC
T ss_pred HHHHHHHcCCCEEEecC--CC-CHHHHHHHHHhCCCCEEEeCCCCCCCCCHHHHHHcCCcEEEECh
Confidence 35677889999996663 22 356778887765554333 45567999999999999975
No 500
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=48.25 E-value=68 Score=29.07 Aligned_cols=122 Identities=11% Similarity=0.083 Sum_probs=72.4
Q ss_pred cCcccHHHHHHHHHHcCCCEEEEecccc-------cc------ccCCCCCHHHHHHHHhcC-CCCeeeeeeecc-CcHH-
Q psy11600 15 SDLSNLHSESQNLLDSGADYLHLDVMDG-------TF------VPNLTFGHPVVKCLRNKI-PKAFFETHMMVQ-NPQQ- 78 (277)
Q Consensus 15 ~d~~~l~~~~~~l~~~~~~~~h~DimDg-------~f------vp~~~~g~~~v~~l~~~~-~~~~~d~Hlmv~-~p~~- 78 (277)
.+...+.++.+++.+.|.+.+-+.+-.| .| .+++.+..+.++++|+.+ +++++-+..--. ++.+
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a 215 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDET 215 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 3555666777778888999877665411 11 123445567899999865 454443332111 3333
Q ss_pred --hHHHHHhcCCCeEEEeccCCC-CCHHHHHHHHhhCCCcccc------hhhhhHHHHhcCCCeEEeecC
Q psy11600 79 --WIEPMADANVDQYTFHVEPVD-NVPQVIRQIKEAGMKVGQV------LQDWIEPMADANVDQYTFHVE 139 (277)
Q Consensus 79 --~i~~l~~ag~d~i~~H~e~~d-~g~~~i~~i~~~~~~~~d~------p~~~i~~~~~~g~d~it~H~E 139 (277)
+++.+.+.|++|+- |... ......+.+++.+..|+-. +.++-+.+.+-.+|.+.+-+-
T Consensus 216 ~~~~~~l~~~~i~~iE---~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 282 (392)
T 2poz_A 216 IRFCRKIGELDICFVE---EPCDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIG 282 (392)
T ss_dssp HHHHHHHGGGCEEEEE---CCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTT
T ss_pred HHHHHHHHhcCCCEEE---CCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCcc
Confidence 46666777888773 2222 2466788888887666532 555545454555899988654
Done!