Query psy11601
Match_columns 82
No_of_seqs 114 out of 1048
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 22:50:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11601.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11601hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ovp_A Ribulose-phosphate 3-ep 99.9 2.2E-25 7.5E-30 150.1 9.8 81 1-81 141-221 (228)
2 3inp_A D-ribulose-phosphate 3- 99.9 2.2E-25 7.4E-30 151.9 8.6 79 1-79 163-245 (246)
3 1tqx_A D-ribulose-5-phosphate 99.9 2.6E-25 9E-30 149.8 8.9 81 1-81 145-225 (227)
4 3ctl_A D-allulose-6-phosphate 99.9 5.2E-24 1.8E-28 143.7 7.8 79 1-79 135-219 (231)
5 3cu2_A Ribulose-5-phosphate 3- 99.9 4.8E-23 1.6E-27 139.5 4.8 76 1-77 155-236 (237)
6 1h1y_A D-ribulose-5-phosphate 99.9 2.1E-21 7.1E-26 129.7 9.6 79 1-79 145-223 (228)
7 1tqj_A Ribulose-phosphate 3-ep 99.9 2.2E-22 7.7E-27 135.1 4.5 78 1-78 141-222 (230)
8 2fli_A Ribulose-phosphate 3-ep 99.8 7.8E-19 2.7E-23 115.6 7.6 78 1-78 138-219 (220)
9 1rpx_A Protein (ribulose-phosp 99.8 2.3E-19 8E-24 119.3 5.1 78 1-78 147-228 (230)
10 3f4w_A Putative hexulose 6 pho 99.7 8.5E-18 2.9E-22 110.1 6.1 78 2-79 132-209 (211)
11 3jr2_A Hexulose-6-phosphate sy 99.7 1.2E-18 4.1E-23 115.6 1.2 77 1-80 140-216 (218)
12 2czd_A Orotidine 5'-phosphate 99.7 1.6E-17 5.4E-22 109.5 5.3 79 1-79 127-207 (208)
13 1q6o_A Humps, 3-keto-L-gulonat 99.6 7.1E-17 2.4E-21 106.8 4.1 74 1-80 140-214 (216)
14 3ajx_A 3-hexulose-6-phosphate 99.6 5.5E-16 1.9E-20 101.2 5.3 72 1-77 135-206 (207)
15 1eix_A Orotidine 5'-monophosph 99.5 3.3E-15 1.1E-19 100.9 3.5 75 4-79 158-243 (245)
16 3exr_A RMPD (hexulose-6-phosph 99.5 5.9E-15 2E-19 98.6 4.1 76 4-81 145-220 (221)
17 1dbt_A Orotidine 5'-phosphate 99.5 6.7E-15 2.3E-19 99.0 3.1 79 1-80 147-237 (239)
18 2yyu_A Orotidine 5'-phosphate 99.5 1.2E-14 4.2E-19 98.1 3.0 78 1-79 148-237 (246)
19 2tps_A Protein (thiamin phosph 99.5 3.9E-13 1.3E-17 88.4 8.9 78 3-80 145-223 (227)
20 1xi3_A Thiamine phosphate pyro 99.4 6.6E-13 2.3E-17 86.5 8.8 77 3-80 137-213 (215)
21 3o63_A Probable thiamine-phosp 99.4 4.6E-13 1.6E-17 90.7 8.1 68 12-79 173-241 (243)
22 1yad_A Regulatory protein TENI 99.4 1E-12 3.4E-17 86.7 8.3 74 5-79 138-214 (221)
23 1geq_A Tryptophan synthase alp 99.4 1.8E-13 6E-18 91.5 3.3 76 2-80 164-244 (248)
24 1rd5_A Tryptophan synthase alp 99.3 3E-12 1E-16 86.5 6.7 74 5-79 176-259 (262)
25 2v82_A 2-dehydro-3-deoxy-6-pho 99.3 4.1E-12 1.4E-16 83.2 7.0 66 15-80 133-203 (212)
26 1qop_A Tryptophan synthase alp 99.3 1.6E-11 5.6E-16 83.6 7.3 60 2-63 178-240 (268)
27 1wa3_A 2-keto-3-deoxy-6-phosph 99.2 1.8E-11 6.2E-16 79.6 6.9 63 16-79 137-202 (205)
28 1y0e_A Putative N-acetylmannos 99.2 2.8E-11 9.7E-16 79.5 6.4 72 2-77 145-221 (223)
29 3nl6_A Thiamine biosynthetic b 99.2 9.2E-11 3.2E-15 86.9 8.1 66 14-79 153-231 (540)
30 2yw3_A 4-hydroxy-2-oxoglutarat 99.2 6.8E-11 2.3E-15 78.1 6.6 61 16-77 138-201 (207)
31 1yxy_A Putative N-acetylmannos 99.2 9.2E-11 3.2E-15 77.7 7.2 70 2-78 163-233 (234)
32 2zbt_A Pyridoxal biosynthesis 99.2 6.1E-11 2.1E-15 81.3 6.3 66 14-80 193-261 (297)
33 3m47_A Orotidine 5'-phosphate 99.1 2.9E-11 9.8E-16 81.1 3.2 79 1-81 145-226 (228)
34 3ceu_A Thiamine phosphate pyro 99.0 1.5E-10 5.2E-15 76.1 3.8 53 15-67 129-182 (210)
35 1xm3_A Thiazole biosynthesis p 99.0 1.1E-09 3.9E-14 74.5 8.2 62 17-79 167-229 (264)
36 3ve9_A Orotidine-5'-phosphate 99.0 1.2E-09 4E-14 72.9 7.4 64 17-81 139-204 (215)
37 1w8s_A FBP aldolase, fructose- 99.0 2.3E-09 7.9E-14 73.0 7.4 65 16-80 183-254 (263)
38 1mxs_A KDPG aldolase; 2-keto-3 98.9 3.9E-09 1.3E-13 70.6 7.4 48 16-64 153-201 (225)
39 4adt_A Pyridoxine biosynthetic 98.9 2.5E-09 8.7E-14 74.3 6.2 65 15-80 194-261 (297)
40 1wbh_A KHG/KDPG aldolase; lyas 98.9 1.7E-09 5.9E-14 71.8 4.7 49 16-65 143-192 (214)
41 1vhc_A Putative KHG/KDPG aldol 98.9 7.7E-09 2.6E-13 69.2 7.7 59 16-75 144-208 (224)
42 1thf_D HISF protein; thermophI 98.9 7.4E-09 2.5E-13 68.9 7.5 69 3-75 173-243 (253)
43 1h5y_A HISF; histidine biosynt 98.9 1E-08 3.6E-13 67.4 8.0 69 2-74 175-245 (253)
44 3vnd_A TSA, tryptophan synthas 98.9 8.5E-09 2.9E-13 70.6 7.5 61 1-62 178-240 (267)
45 3o07_A Pyridoxine biosynthesis 98.9 5.2E-09 1.8E-13 72.4 6.4 65 15-80 185-252 (291)
46 3qja_A IGPS, indole-3-glycerol 98.9 5.6E-09 1.9E-13 71.6 6.5 66 10-76 194-261 (272)
47 2h6r_A Triosephosphate isomera 98.8 2.3E-09 7.7E-14 71.3 4.3 67 10-76 150-218 (219)
48 2qjg_A Putative aldolase MJ040 98.8 1.1E-08 3.7E-13 69.0 7.7 65 15-80 189-260 (273)
49 2yzr_A Pyridoxal biosynthesis 98.8 4.4E-09 1.5E-13 74.0 5.8 64 16-80 228-294 (330)
50 3ru6_A Orotidine 5'-phosphate 98.8 1.1E-08 3.6E-13 71.4 7.3 60 20-79 182-252 (303)
51 2nv1_A Pyridoxal biosynthesis 98.8 6.4E-09 2.2E-13 71.7 5.9 66 14-80 193-261 (305)
52 3tfx_A Orotidine 5'-phosphate 98.8 7.8E-09 2.7E-13 70.7 6.2 66 13-81 164-240 (259)
53 1vzw_A Phosphoribosyl isomeras 98.8 8.1E-09 2.8E-13 68.6 5.7 67 2-72 167-238 (244)
54 4dbe_A Orotidine 5'-phosphate 98.8 2.6E-08 8.9E-13 66.5 7.1 63 18-81 147-211 (222)
55 1vqt_A Orotidine 5'-phosphate 98.7 2.5E-08 8.7E-13 66.1 4.6 57 18-77 146-212 (213)
56 2y88_A Phosphoribosyl isomeras 98.6 3.8E-08 1.3E-12 65.1 5.3 65 2-70 170-239 (244)
57 3igs_A N-acetylmannosamine-6-p 98.6 1.7E-07 6E-12 62.7 8.5 63 14-81 168-231 (232)
58 2b7n_A Probable nicotinate-nuc 98.6 4.3E-08 1.5E-12 67.2 5.2 53 12-64 211-264 (273)
59 1to3_A Putative aldolase YIHT; 98.6 7.5E-08 2.6E-12 66.9 6.3 52 29-80 221-289 (304)
60 4e38_A Keto-hydroxyglutarate-a 98.6 1.5E-07 5.2E-12 63.4 7.6 47 16-62 161-207 (232)
61 2ekc_A AQ_1548, tryptophan syn 98.6 9E-08 3.1E-12 64.9 5.8 74 5-80 180-259 (262)
62 1ka9_F Imidazole glycerol phos 98.6 2.9E-07 1E-11 61.1 8.1 58 16-74 184-243 (252)
63 1qpo_A Quinolinate acid phosph 98.6 1.1E-07 3.9E-12 65.6 6.2 53 12-64 223-276 (284)
64 1o4u_A Type II quinolic acid p 98.6 4.1E-08 1.4E-12 67.9 3.9 53 12-64 222-275 (285)
65 1vc4_A Indole-3-glycerol phosp 98.5 3.7E-08 1.2E-12 66.9 3.2 57 17-74 192-253 (254)
66 3tsm_A IGPS, indole-3-glycerol 98.5 2.1E-07 7.3E-12 63.9 6.8 60 16-75 206-267 (272)
67 3tr2_A Orotidine 5'-phosphate 98.5 2.2E-07 7.5E-12 62.7 6.6 57 23-79 171-238 (239)
68 2jbm_A Nicotinate-nucleotide p 98.5 8.4E-08 2.9E-12 66.6 4.4 53 12-64 226-279 (299)
69 3lab_A Putative KDPG (2-keto-3 98.5 1.4E-07 4.8E-12 63.1 4.5 47 17-63 147-193 (217)
70 3q58_A N-acetylmannosamine-6-p 98.5 5.4E-07 1.9E-11 60.2 7.4 59 15-78 169-228 (229)
71 1wv2_A Thiazole moeity, thiazo 98.5 9.1E-07 3.1E-11 60.6 8.3 61 17-78 176-237 (265)
72 3ldv_A Orotidine 5'-phosphate 98.4 3.9E-07 1.3E-11 62.1 6.0 68 6-77 175-254 (255)
73 3nav_A Tryptophan synthase alp 98.4 6.3E-07 2.2E-11 61.5 7.1 58 4-62 182-242 (271)
74 3glc_A Aldolase LSRF; TIM barr 98.4 6.7E-07 2.3E-11 62.0 7.3 60 20-80 215-280 (295)
75 2htm_A Thiazole biosynthesis p 98.4 1.5E-06 5E-11 59.7 8.4 62 17-78 165-228 (268)
76 1x1o_A Nicotinate-nucleotide p 98.4 3.4E-07 1.2E-11 63.3 4.4 51 12-64 225-275 (286)
77 1ep3_A Dihydroorotate dehydrog 98.3 5.7E-07 1.9E-11 61.3 4.7 62 8-70 221-283 (311)
78 3c2e_A Nicotinate-nucleotide p 98.3 2.4E-07 8.1E-12 64.2 2.6 37 28-64 248-284 (294)
79 2gjl_A Hypothetical protein PA 98.3 3.3E-06 1.1E-10 58.5 7.5 52 13-65 157-209 (328)
80 2w6r_A Imidazole glycerol phos 98.2 1.4E-06 4.7E-11 58.3 5.1 50 16-66 188-238 (266)
81 3tdn_A FLR symmetric alpha-bet 98.2 1.3E-07 4.4E-12 63.0 0.0 57 16-73 188-245 (247)
82 3gnn_A Nicotinate-nucleotide p 98.2 2.2E-06 7.4E-11 59.7 5.9 47 18-64 241-288 (298)
83 2e6f_A Dihydroorotate dehydrog 98.2 1.7E-06 5.8E-11 59.4 5.2 70 8-77 223-295 (314)
84 3l0g_A Nicotinate-nucleotide p 98.2 2.4E-06 8.2E-11 59.5 5.7 50 12-63 236-285 (300)
85 3tqv_A Nicotinate-nucleotide p 98.2 1.6E-06 5.4E-11 60.1 4.6 49 12-62 227-275 (287)
86 3bw2_A 2-nitropropane dioxygen 98.2 3.7E-06 1.3E-10 59.2 5.9 49 17-66 197-246 (369)
87 1jub_A Dihydroorotate dehydrog 98.1 2.5E-06 8.7E-11 58.4 4.6 59 9-67 221-282 (311)
88 3paj_A Nicotinate-nucleotide p 98.1 2.3E-06 7.7E-11 60.1 4.0 49 12-62 260-308 (320)
89 1qap_A Quinolinic acid phospho 98.1 1.8E-06 6.2E-11 59.9 3.1 49 15-63 237-286 (296)
90 3tha_A Tryptophan synthase alp 98.0 5.4E-06 1.8E-10 56.4 4.7 71 5-77 174-250 (252)
91 1ujp_A Tryptophan synthase alp 98.0 6.4E-06 2.2E-10 56.3 4.9 54 6-62 178-234 (271)
92 3bo9_A Putative nitroalkan dio 98.0 7.9E-06 2.7E-10 56.8 4.9 50 15-65 163-213 (326)
93 1qo2_A Molecule: N-((5-phospho 97.9 9.2E-06 3.1E-10 53.7 4.4 54 16-70 176-237 (241)
94 4ef8_A Dihydroorotate dehydrog 97.9 6.5E-06 2.2E-10 58.3 3.9 71 7-77 255-328 (354)
95 1i4n_A Indole-3-glycerol phosp 97.9 1.7E-05 5.7E-10 53.9 5.6 59 17-76 189-249 (251)
96 2z6i_A Trans-2-enoyl-ACP reduc 97.9 1.3E-05 4.6E-10 55.6 4.6 50 14-64 148-198 (332)
97 3cwo_X Beta/alpha-barrel prote 97.9 6.2E-05 2.1E-09 48.1 7.4 57 17-74 163-221 (237)
98 3zwt_A Dihydroorotate dehydrog 97.9 1.4E-05 4.7E-10 56.8 4.6 60 7-66 275-337 (367)
99 3oix_A Putative dihydroorotate 97.9 1.2E-05 4E-10 56.8 4.2 61 7-67 252-315 (345)
100 3b0p_A TRNA-dihydrouridine syn 97.8 1.2E-05 4.3E-10 56.4 3.3 50 14-64 182-232 (350)
101 3vk5_A MOEO5; TIM barrel, tran 97.8 0.0001 3.6E-09 51.0 7.4 51 13-63 210-262 (286)
102 3tjx_A Dihydroorotate dehydrog 97.7 3.2E-05 1.1E-09 54.1 4.6 72 7-78 255-329 (354)
103 3khj_A Inosine-5-monophosphate 97.7 4E-05 1.4E-09 54.2 4.9 47 16-63 192-242 (361)
104 4gj1_A 1-(5-phosphoribosyl)-5- 97.7 8.8E-05 3E-09 49.7 6.1 50 16-66 63-113 (243)
105 1viz_A PCRB protein homolog; s 97.7 3.4E-05 1.2E-09 52.1 4.1 50 15-65 168-218 (240)
106 1w0m_A TIM, triosephosphate is 97.7 0.00014 4.9E-09 48.6 7.0 70 10-79 153-224 (226)
107 3eww_A Ompdecase, orotidine-5' 97.7 7.9E-05 2.7E-09 50.8 5.6 45 32-76 193-249 (260)
108 3vzx_A Heptaprenylglyceryl pho 97.7 7.3E-05 2.5E-09 50.2 5.3 48 16-64 167-215 (228)
109 1p0k_A Isopentenyl-diphosphate 97.7 9.1E-05 3.1E-09 51.6 6.0 50 13-62 235-285 (349)
110 4fo4_A Inosine 5'-monophosphat 97.6 7.9E-05 2.7E-09 52.9 5.3 48 16-63 196-246 (366)
111 1hg3_A Triosephosphate isomera 97.6 0.00022 7.6E-09 47.7 7.0 66 10-75 156-223 (225)
112 1vhn_A Putative flavin oxidore 97.6 5.1E-05 1.7E-09 52.4 3.9 51 17-70 174-226 (318)
113 3qw3_A Orotidine-5-phosphate d 97.6 0.00014 4.6E-09 49.4 5.8 64 18-81 182-252 (255)
114 1z41_A YQJM, probable NADH-dep 97.6 8.6E-05 2.9E-09 51.7 5.0 55 16-71 265-321 (338)
115 3r2g_A Inosine 5'-monophosphat 97.5 0.00012 4E-09 52.1 5.2 46 16-63 188-234 (361)
116 1f76_A Dihydroorotate dehydrog 97.5 3.1E-05 1E-09 53.7 2.1 54 14-67 273-329 (336)
117 1vyr_A Pentaerythritol tetrani 97.5 0.00018 6.1E-09 50.8 6.1 54 17-71 283-337 (364)
118 2gou_A Oxidoreductase, FMN-bin 97.5 0.00015 5.3E-09 51.1 5.7 54 17-71 282-336 (365)
119 2r14_A Morphinone reductase; H 97.5 0.00012 4.3E-09 51.9 5.2 54 17-71 288-342 (377)
120 1gox_A (S)-2-hydroxy-acid oxid 97.5 0.00016 5.5E-09 51.1 5.5 66 14-79 264-337 (370)
121 1gte_A Dihydropyrimidine dehyd 97.5 0.00015 5.2E-09 56.7 5.6 64 14-77 772-838 (1025)
122 3hgj_A Chromate reductase; TIM 97.5 0.00017 5.8E-09 50.5 5.1 55 16-71 276-332 (349)
123 3gr7_A NADPH dehydrogenase; fl 97.4 0.00031 1E-08 49.2 6.1 56 16-72 265-322 (340)
124 3tdn_A FLR symmetric alpha-bet 97.4 0.0002 7E-09 47.4 4.8 51 14-65 65-116 (247)
125 2agk_A 1-(5-phosphoribosyl)-5- 97.4 0.00021 7.3E-09 48.3 4.9 59 16-77 64-125 (260)
126 3w01_A Heptaprenylglyceryl pho 97.4 0.00011 3.7E-09 49.6 3.3 47 16-63 173-220 (235)
127 2f6u_A GGGPS, (S)-3-O-geranylg 97.4 0.00011 3.6E-09 49.5 3.3 47 15-62 176-223 (234)
128 1vcf_A Isopentenyl-diphosphate 97.4 0.00055 1.9E-08 47.4 7.0 67 13-79 240-312 (332)
129 2ffc_A Orotidine 5-monophospha 97.4 0.0007 2.4E-08 48.0 7.4 63 18-81 278-348 (353)
130 3l5l_A Xenobiotic reductase A; 97.4 0.00021 7.2E-09 50.3 4.5 56 16-72 283-340 (363)
131 1ka9_F Imidazole glycerol phos 97.3 0.0003 1E-08 46.4 4.9 50 15-65 62-112 (252)
132 3i65_A Dihydroorotate dehydrog 97.3 0.00011 3.7E-09 53.1 2.9 71 7-77 322-396 (415)
133 4avf_A Inosine-5'-monophosphat 97.3 0.00033 1.1E-08 51.2 5.2 47 16-62 317-366 (490)
134 2fds_A Orotidine-monophosphate 97.3 0.00024 8.2E-09 50.4 4.3 63 19-81 269-338 (352)
135 3iwp_A Copper homeostasis prot 97.3 0.0006 2.1E-08 47.2 6.1 48 10-57 189-238 (287)
136 3ffs_A Inosine-5-monophosphate 97.2 0.00047 1.6E-08 49.5 5.4 48 16-63 231-281 (400)
137 3aty_A Tcoye, prostaglandin F2 97.2 0.00053 1.8E-08 48.7 5.4 51 20-71 299-350 (379)
138 1tv5_A Dhodehase, dihydroorota 97.2 0.00017 5.8E-09 52.4 2.7 57 14-70 357-416 (443)
139 3gka_A N-ethylmaleimide reduct 97.2 0.00051 1.8E-08 48.6 4.9 50 21-71 280-330 (361)
140 2agk_A 1-(5-phosphoribosyl)-5- 97.2 0.0013 4.5E-08 44.4 6.7 59 16-74 189-257 (260)
141 1jcn_A Inosine monophosphate d 97.2 0.00059 2E-08 49.8 5.3 50 14-64 344-394 (514)
142 3qw4_B UMP synthase; N-termina 97.2 0.0011 3.6E-08 48.3 6.6 63 18-80 183-252 (453)
143 2hsa_B 12-oxophytodienoate red 97.1 0.00095 3.3E-08 47.7 6.0 54 17-71 308-362 (402)
144 3sgz_A Hydroxyacid oxidase 2; 97.1 0.00075 2.6E-08 47.8 5.3 67 13-79 255-329 (352)
145 1thf_D HISF protein; thermophI 97.1 0.00069 2.4E-08 44.6 4.7 49 15-64 61-110 (253)
146 3g3d_A UMP synthase, uridine 5 97.1 0.00092 3.2E-08 46.7 5.5 45 32-76 245-301 (312)
147 2i1o_A Nicotinate phosphoribos 97.1 0.0009 3.1E-08 48.0 5.5 37 27-63 268-304 (398)
148 3vkj_A Isopentenyl-diphosphate 97.1 0.0014 4.8E-08 46.4 6.4 64 16-79 254-323 (368)
149 1ps9_A 2,4-dienoyl-COA reducta 97.0 0.00055 1.9E-08 51.1 4.2 54 17-71 269-324 (671)
150 1eep_A Inosine 5'-monophosphat 97.0 0.00069 2.4E-08 48.1 4.5 46 17-62 242-290 (404)
151 4gj1_A 1-(5-phosphoribosyl)-5- 97.0 0.0016 5.4E-08 43.6 6.0 57 16-73 183-241 (243)
152 4ab4_A Xenobiotic reductase B; 97.0 0.00066 2.3E-08 48.0 4.4 50 21-71 272-322 (362)
153 3usb_A Inosine-5'-monophosphat 97.0 0.0012 4.2E-08 48.4 5.6 46 16-62 344-393 (511)
154 1pii_A N-(5'phosphoribosyl)ant 97.0 0.0012 4.2E-08 48.1 5.4 59 16-75 194-254 (452)
155 1jvn_A Glutamine, bifunctional 96.9 0.0019 6.4E-08 47.9 6.2 56 16-72 484-542 (555)
156 1icp_A OPR1, 12-oxophytodienoa 96.9 0.0012 4E-08 46.8 4.9 51 20-71 293-344 (376)
157 4fxs_A Inosine-5'-monophosphat 96.9 0.0015 5.2E-08 47.8 5.3 47 16-62 319-368 (496)
158 1p4c_A L(+)-mandelate dehydrog 96.9 0.00074 2.5E-08 47.9 3.4 48 14-62 264-312 (380)
159 1v5x_A PRA isomerase, phosphor 96.8 0.0039 1.3E-07 40.9 6.4 67 6-78 128-197 (203)
160 1nsj_A PRAI, phosphoribosyl an 96.8 0.0015 5E-08 42.9 4.3 68 5-78 132-203 (205)
161 3gdm_A Orotidine 5'-phosphate 96.8 0.0031 1.1E-07 43.1 5.8 45 32-76 198-254 (267)
162 2nli_A Lactate oxidase; flavoe 96.7 0.0022 7.6E-08 45.3 5.0 67 12-78 266-340 (368)
163 3kru_A NADH:flavin oxidoreduct 96.7 0.0018 6E-08 45.5 4.4 55 16-71 265-321 (343)
164 2c6q_A GMP reductase 2; TIM ba 96.7 0.01 3.6E-07 41.6 8.3 44 18-62 213-257 (351)
165 2y88_A Phosphoribosyl isomeras 96.7 0.0027 9.3E-08 41.5 4.9 45 18-63 64-109 (244)
166 1vzw_A Phosphoribosyl isomeras 96.7 0.0028 9.5E-08 41.6 4.9 45 18-63 65-110 (244)
167 1jvn_A Glutamine, bifunctional 96.7 0.0029 9.8E-08 46.9 5.5 48 14-62 313-372 (555)
168 1vrd_A Inosine-5'-monophosphat 96.7 0.0025 8.6E-08 46.1 4.9 33 29-61 340-373 (494)
169 3sr7_A Isopentenyl-diphosphate 96.6 0.0036 1.2E-07 44.4 5.6 66 14-79 263-335 (365)
170 3n3m_A Orotidine 5'-phosphate 96.6 0.0074 2.5E-07 42.6 7.0 62 20-81 268-336 (342)
171 4a29_A Engineered retro-aldol 96.6 0.0037 1.3E-07 42.7 5.3 53 16-68 190-244 (258)
172 2qr6_A IMP dehydrogenase/GMP r 96.6 0.0039 1.3E-07 44.0 5.4 33 30-62 278-311 (393)
173 2w6r_A Imidazole glycerol phos 96.6 0.0038 1.3E-07 41.4 5.1 45 16-61 62-107 (266)
174 1h5y_A HISF; histidine biosynt 96.6 0.0039 1.3E-07 40.4 5.0 50 15-65 64-114 (253)
175 2p10_A MLL9387 protein; putati 96.6 0.0036 1.2E-07 43.3 5.0 64 16-80 213-281 (286)
176 1qo2_A Molecule: N-((5-phospho 96.5 0.0034 1.2E-07 41.2 4.6 50 15-66 61-111 (241)
177 1ypf_A GMP reductase; GUAC, pu 96.5 0.0082 2.8E-07 41.7 6.5 46 16-62 198-244 (336)
178 2nzl_A Hydroxyacid oxidase 1; 96.4 0.0049 1.7E-07 43.9 5.2 67 12-78 289-363 (392)
179 2bdq_A Copper homeostasis prot 96.3 0.014 4.6E-07 39.1 6.5 56 13-68 161-218 (224)
180 4aaj_A N-(5'-phosphoribosyl)an 96.1 0.024 8.4E-07 37.7 7.1 69 5-80 155-226 (228)
181 1o94_A Tmadh, trimethylamine d 96.1 0.0063 2.2E-07 46.0 4.6 54 17-71 280-335 (729)
182 3l5a_A NADH/flavin oxidoreduct 96.1 0.0095 3.3E-07 42.8 5.2 51 20-71 308-360 (419)
183 1zfj_A Inosine monophosphate d 96.1 0.011 3.9E-07 42.5 5.6 47 16-62 321-370 (491)
184 1yya_A Triosephosphate isomera 95.9 0.018 6E-07 39.1 5.7 62 9-70 174-246 (250)
185 2btm_A TIM, protein (triosepho 95.8 0.021 7E-07 38.8 5.4 43 28-70 203-246 (252)
186 4a3u_A NCR, NADH\:flavin oxido 95.7 0.035 1.2E-06 38.9 6.8 57 11-71 272-329 (358)
187 1twd_A Copper homeostasis prot 95.7 0.027 9.2E-07 38.4 5.9 50 9-58 150-199 (256)
188 1aw2_A Triosephosphate isomera 95.7 0.011 3.8E-07 40.2 3.9 64 9-72 177-250 (256)
189 1kbi_A Cytochrome B2, L-LCR; f 95.7 0.027 9.3E-07 41.4 6.1 65 14-78 382-459 (511)
190 2i14_A Nicotinate-nucleotide p 95.6 0.012 4.1E-07 42.1 4.1 36 27-63 266-301 (395)
191 2j27_A Triosephosphate isomera 95.6 0.033 1.1E-06 37.7 5.9 62 9-71 175-247 (250)
192 1o5x_A TIM, triosephosphate is 95.5 0.034 1.2E-06 37.6 5.9 62 9-71 173-245 (248)
193 3fok_A Uncharacterized protein 95.5 0.022 7.5E-07 39.7 4.9 58 20-78 229-296 (307)
194 2jgq_A Triosephosphate isomera 95.5 0.018 6.2E-07 38.6 4.4 62 9-70 166-230 (233)
195 2yc6_A Triosephosphate isomera 95.5 0.085 2.9E-06 35.8 7.6 62 9-71 178-250 (257)
196 3k30_A Histamine dehydrogenase 95.3 0.011 3.6E-07 44.3 2.9 53 18-71 284-338 (690)
197 1tre_A Triosephosphate isomera 95.2 0.023 7.9E-07 38.6 4.2 64 9-72 175-248 (255)
198 2c6q_A GMP reductase 2; TIM ba 94.8 0.041 1.4E-06 38.6 4.7 44 14-57 146-189 (351)
199 1pii_A N-(5'phosphoribosyl)ant 94.8 0.056 1.9E-06 39.4 5.5 66 5-78 382-450 (452)
200 1ub3_A Aldolase protein; schif 94.7 0.04 1.4E-06 36.5 4.2 47 16-62 162-212 (220)
201 2f7f_A Nicotinate phosphoribos 94.7 0.018 6.3E-07 42.3 2.8 35 28-62 285-321 (494)
202 1vc4_A Indole-3-glycerol phosp 94.6 0.19 6.4E-06 33.7 7.4 53 15-69 93-146 (254)
203 1mzh_A Deoxyribose-phosphate a 94.6 0.11 3.7E-06 34.1 6.1 43 16-58 161-205 (225)
204 3oa3_A Aldolase; structural ge 94.6 0.12 4.2E-06 35.6 6.5 59 4-62 208-270 (288)
205 4af0_A Inosine-5'-monophosphat 94.3 0.081 2.8E-06 39.6 5.5 42 20-62 376-418 (556)
206 1vcv_A Probable deoxyribose-ph 94.3 0.18 6.1E-06 33.5 6.6 47 13-59 167-222 (226)
207 1geq_A Tryptophan synthase alp 94.2 0.083 2.8E-06 34.5 4.8 43 16-59 68-117 (248)
208 2fli_A Ribulose-phosphate 3-ep 94.1 0.42 1.4E-05 30.4 8.0 61 12-75 45-107 (220)
209 1vrd_A Inosine-5'-monophosphat 94.0 0.096 3.3E-06 37.8 5.4 46 13-58 262-307 (494)
210 3m9y_A Triosephosphate isomera 94.0 0.079 2.7E-06 35.9 4.5 61 9-69 178-249 (254)
211 4fxs_A Inosine-5'-monophosphat 93.9 0.11 3.6E-06 38.0 5.3 46 12-57 255-300 (496)
212 3kts_A Glycerol uptake operon 93.8 0.073 2.5E-06 34.7 3.9 43 20-63 142-186 (192)
213 1b9b_A TIM, protein (triosepho 93.6 0.024 8.1E-07 38.6 1.4 42 29-70 206-250 (255)
214 1me8_A Inosine-5'-monophosphat 93.6 0.065 2.2E-06 39.1 3.8 34 29-62 352-386 (503)
215 4avf_A Inosine-5'-monophosphat 93.5 0.14 4.8E-06 37.3 5.3 46 12-57 253-298 (490)
216 2cu0_A Inosine-5'-monophosphat 93.4 0.13 4.3E-06 37.3 5.0 46 16-62 316-362 (486)
217 3f4w_A Putative hexulose 6 pho 93.4 0.19 6.4E-06 31.9 5.3 47 13-59 37-86 (211)
218 3tjl_A NADPH dehydrogenase; OL 93.4 0.056 1.9E-06 38.9 3.1 51 20-71 305-360 (407)
219 4gbu_A NADPH dehydrogenase 1; 93.3 0.066 2.3E-06 38.0 3.3 48 24-72 314-363 (400)
220 4fo4_A Inosine 5'-monophosphat 93.3 0.14 4.9E-06 36.2 5.0 45 13-57 133-177 (366)
221 3qja_A IGPS, indole-3-glycerol 93.2 0.15 5.3E-06 34.5 4.9 46 16-62 101-147 (272)
222 3igs_A N-acetylmannosamine-6-p 92.9 0.51 1.7E-05 31.1 7.1 60 15-75 56-127 (232)
223 1ypf_A GMP reductase; GUAC, pu 92.8 0.17 6E-06 34.9 4.8 45 12-57 132-177 (336)
224 3lab_A Putative KDPG (2-keto-3 92.8 0.29 9.8E-06 32.4 5.7 45 13-57 48-92 (217)
225 3tsm_A IGPS, indole-3-glycerol 92.8 0.39 1.3E-05 32.7 6.4 47 15-62 107-154 (272)
226 3zen_D Fatty acid synthase; tr 92.6 0.1 3.6E-06 45.5 4.1 54 9-63 583-652 (3089)
227 3ndo_A Deoxyribose-phosphate a 92.5 0.34 1.2E-05 32.3 5.8 44 15-58 175-220 (231)
228 3r12_A Deoxyribose-phosphate a 92.5 0.42 1.5E-05 32.5 6.3 52 5-59 194-247 (260)
229 1n7k_A Deoxyribose-phosphate a 92.5 0.14 4.9E-06 34.2 3.9 46 15-61 177-227 (234)
230 1eep_A Inosine 5'-monophosphat 92.5 0.23 8E-06 35.0 5.2 44 14-57 179-222 (404)
231 4af0_A Inosine-5'-monophosphat 92.4 0.21 7.2E-06 37.4 5.0 46 12-57 305-350 (556)
232 3ngj_A Deoxyribose-phosphate a 91.5 0.28 9.5E-06 33.0 4.5 52 5-59 178-231 (239)
233 3usb_A Inosine-5'-monophosphat 91.5 0.35 1.2E-05 35.4 5.3 46 12-57 280-325 (511)
234 2qr6_A IMP dehydrogenase/GMP r 91.3 0.31 1.1E-05 34.2 4.7 42 16-58 199-240 (393)
235 2nli_A Lactate oxidase; flavoe 91.1 1.5 5E-05 30.8 8.1 63 14-77 215-281 (368)
236 2i9e_A Triosephosphate isomera 91.1 0.18 6.3E-06 34.2 3.3 63 9-71 172-245 (259)
237 3kht_A Response regulator; PSI 91.1 1.3 4.5E-05 25.4 7.0 60 15-79 65-128 (144)
238 1y0e_A Putative N-acetylmannos 90.9 1.4 4.9E-05 27.9 7.4 60 16-76 44-116 (223)
239 3vkj_A Isopentenyl-diphosphate 90.9 0.28 9.4E-06 34.7 4.2 43 15-58 174-219 (368)
240 3q58_A N-acetylmannosamine-6-p 90.7 0.99 3.4E-05 29.6 6.5 60 15-75 56-127 (229)
241 2uva_G Fatty acid synthase bet 90.7 0.29 9.8E-06 41.5 4.6 48 14-62 741-800 (2060)
242 3r2g_A Inosine 5'-monophosphat 90.7 0.3 1E-05 34.5 4.2 44 14-57 126-169 (361)
243 2nzl_A Hydroxyacid oxidase 1; 90.6 0.99 3.4E-05 32.0 6.8 62 15-77 239-304 (392)
244 4e38_A Keto-hydroxyglutarate-a 90.5 0.56 1.9E-05 31.2 5.2 46 13-58 69-114 (232)
245 3hzh_A Chemotaxis response reg 90.5 1 3.5E-05 26.5 6.0 57 15-76 97-154 (157)
246 1mo0_A TIM, triosephosphate is 90.4 0.73 2.5E-05 31.5 5.8 63 9-71 192-265 (275)
247 3sgz_A Hydroxyacid oxidase 2; 90.3 1.5 5.2E-05 30.8 7.5 62 15-77 204-269 (352)
248 3krs_A Triosephosphate isomera 90.1 0.76 2.6E-05 31.4 5.7 60 9-69 196-266 (271)
249 2oz8_A MLL7089 protein; struct 90.0 0.72 2.5E-05 32.3 5.7 52 6-57 221-273 (389)
250 3khj_A Inosine-5-monophosphate 90.0 0.64 2.2E-05 32.7 5.4 61 15-76 82-143 (361)
251 3f6c_A Positive transcription 89.9 1.6 5.6E-05 24.5 6.4 43 15-57 60-103 (134)
252 1kbi_A Cytochrome B2, L-LCR; f 89.9 2 6.8E-05 31.5 8.1 61 16-77 331-395 (511)
253 3s6d_A Putative triosephosphat 89.8 0.19 6.4E-06 35.1 2.5 48 28-76 259-308 (310)
254 4dad_A Putative pilus assembly 89.7 1.6 5.3E-05 25.1 6.3 59 15-78 81-140 (146)
255 1nvm_A HOA, 4-hydroxy-2-oxoval 89.6 1.7 5.9E-05 30.0 7.3 44 14-57 67-113 (345)
256 2vxn_A Triosephosphate isomera 89.4 2 6.9E-05 28.9 7.3 62 9-71 176-248 (251)
257 1vhc_A Putative KHG/KDPG aldol 89.3 0.82 2.8E-05 30.0 5.2 45 14-58 53-97 (224)
258 3qst_A Triosephosphate isomera 89.0 0.8 2.7E-05 31.0 5.1 60 9-69 177-247 (255)
259 3iv3_A Tagatose 1,6-diphosphat 89.0 0.95 3.2E-05 31.7 5.6 45 18-63 235-286 (332)
260 3jte_A Response regulator rece 88.8 2.1 7.2E-05 24.4 8.1 58 15-77 63-121 (143)
261 3sr7_A Isopentenyl-diphosphate 88.8 0.81 2.8E-05 32.3 5.2 42 15-57 193-237 (365)
262 1p0k_A Isopentenyl-diphosphate 88.5 0.82 2.8E-05 31.5 5.0 41 16-57 166-209 (349)
263 3m6y_A 4-hydroxy-2-oxoglutarat 88.4 0.38 1.3E-05 32.9 3.1 51 29-79 210-269 (275)
264 3ih5_A Electron transfer flavo 88.4 3.7 0.00013 26.6 8.3 71 9-79 14-89 (217)
265 3eul_A Possible nitrate/nitrit 88.3 2.4 8.3E-05 24.5 7.4 59 15-78 75-134 (152)
266 1r2r_A TIM, triosephosphate is 88.3 0.95 3.3E-05 30.5 5.1 60 9-68 173-243 (248)
267 4e7p_A Response regulator; DNA 88.3 2.5 8.4E-05 24.5 7.3 60 14-78 79-139 (150)
268 1jcn_A Inosine monophosphate d 88.0 0.97 3.3E-05 32.8 5.3 43 15-57 282-324 (514)
269 1wbh_A KHG/KDPG aldolase; lyas 87.9 1.2 4E-05 29.0 5.2 45 14-58 52-96 (214)
270 2ekc_A AQ_1548, tryptophan syn 87.9 1.4 4.7E-05 29.3 5.7 42 16-57 81-129 (262)
271 3kto_A Response regulator rece 87.9 2.5 8.4E-05 24.0 7.8 59 15-78 66-125 (136)
272 3to5_A CHEY homolog; alpha(5)b 87.8 2.4 8.3E-05 25.3 6.3 59 15-78 71-132 (134)
273 2pgw_A Muconate cycloisomerase 87.7 1.5 5.1E-05 30.5 6.0 52 9-61 222-275 (384)
274 1p1x_A Deoxyribose-phosphate a 87.7 0.4 1.4E-05 32.5 2.9 49 4-52 170-222 (260)
275 1m6j_A TIM, TPI, triosephospha 87.7 0.91 3.1E-05 30.8 4.7 63 9-71 182-255 (261)
276 1gox_A (S)-2-hydroxy-acid oxid 87.7 1.5 5E-05 30.7 5.9 42 16-58 213-254 (370)
277 3ta6_A Triosephosphate isomera 87.6 1.5 5.3E-05 29.8 5.8 42 29-70 210-252 (267)
278 3eod_A Protein HNR; response r 87.5 1.7 6E-05 24.3 5.3 42 15-56 65-107 (130)
279 1p4c_A L(+)-mandelate dehydrog 87.4 1.1 3.6E-05 31.6 5.1 41 16-57 213-253 (380)
280 3hdg_A Uncharacterized protein 87.4 2.6 8.9E-05 23.8 7.2 59 15-78 65-124 (137)
281 3nhm_A Response regulator; pro 87.3 2.5 8.7E-05 23.6 6.8 60 15-79 61-122 (133)
282 1ney_A TIM, triosephosphate is 86.9 0.38 1.3E-05 32.5 2.4 61 9-70 172-243 (247)
283 1me8_A Inosine-5'-monophosphat 86.8 0.63 2.1E-05 33.9 3.7 46 13-58 267-313 (503)
284 2zad_A Muconate cycloisomerase 86.8 1 3.6E-05 30.8 4.7 50 6-56 213-264 (345)
285 4g1k_A Triosephosphate isomera 86.8 2 6.7E-05 29.4 6.0 59 9-67 200-265 (272)
286 4adt_A Pyridoxine biosynthetic 86.5 1.2 4E-05 30.6 4.8 40 14-54 64-104 (297)
287 2gkg_A Response regulator homo 86.3 2.8 9.4E-05 23.0 5.8 57 15-76 64-122 (127)
288 3lua_A Response regulator rece 86.1 2.5 8.6E-05 24.0 5.5 42 15-56 65-109 (140)
289 2ovl_A Putative racemase; stru 85.9 1.5 5.1E-05 30.4 5.1 52 9-61 223-276 (371)
290 1tmy_A CHEY protein, TMY; chem 85.8 3 0.0001 22.9 6.9 55 15-74 61-116 (120)
291 3m0z_A Putative aldolase; MCSG 85.5 3.2 0.00011 28.0 6.3 53 29-81 187-248 (249)
292 3rqi_A Response regulator prot 85.4 2.3 8E-05 25.7 5.4 42 15-56 65-107 (184)
293 1yxy_A Putative N-acetylmannos 85.4 4 0.00014 26.1 6.7 59 17-76 58-130 (234)
294 1mxs_A KDPG aldolase; 2-keto-3 85.3 1.4 4.7E-05 28.9 4.5 45 14-58 62-106 (225)
295 3lte_A Response regulator; str 85.3 3.3 0.00011 23.1 7.4 58 15-77 64-123 (132)
296 3snk_A Response regulator CHEY 85.1 1.9 6.5E-05 24.4 4.7 57 15-76 73-130 (135)
297 1mdl_A Mandelate racemase; iso 85.1 1.8 6.2E-05 29.7 5.2 50 9-59 221-272 (359)
298 3nav_A Tryptophan synthase alp 85.0 1.2 4E-05 30.2 4.1 45 15-59 83-134 (271)
299 2yxb_A Coenzyme B12-dependent 84.7 5.1 0.00018 24.6 7.7 36 20-55 90-126 (161)
300 1rpx_A Protein (ribulose-phosp 84.4 5.6 0.00019 25.4 7.1 60 15-75 55-116 (230)
301 1vkf_A Glycerol uptake operon 84.4 0.91 3.1E-05 29.5 3.2 33 29-62 149-183 (188)
302 1qpo_A Quinolinate acid phosph 84.4 1.4 4.7E-05 30.1 4.3 54 18-74 183-236 (284)
303 2qgy_A Enolase from the enviro 84.4 2.9 0.0001 29.2 6.1 50 9-59 226-277 (391)
304 2a4a_A Deoxyribose-phosphate a 84.3 1.4 4.7E-05 30.2 4.2 49 4-52 192-249 (281)
305 1rvk_A Isomerase/lactonizing e 84.3 2.5 8.5E-05 29.2 5.7 49 9-58 232-283 (382)
306 3kcn_A Adenylate cyclase homol 84.3 4.3 0.00015 23.4 7.2 57 15-76 62-120 (151)
307 3r0j_A Possible two component 84.2 6 0.00021 25.1 7.6 59 15-78 81-140 (250)
308 3hv2_A Response regulator/HD d 84.1 4.4 0.00015 23.4 7.9 59 15-78 72-132 (153)
309 2p8b_A Mandelate racemase/muco 84.0 2.1 7.2E-05 29.5 5.2 52 7-59 216-269 (369)
310 3ajx_A 3-hexulose-6-phosphate 84.0 1 3.4E-05 28.4 3.3 43 14-56 38-83 (207)
311 2og9_A Mandelate racemase/muco 84.0 1.6 5.6E-05 30.5 4.6 47 9-56 239-287 (393)
312 3vnd_A TSA, tryptophan synthas 83.9 1 3.6E-05 30.4 3.5 45 15-59 81-132 (267)
313 1nu5_A Chloromuconate cycloiso 83.9 2.3 7.8E-05 29.3 5.3 50 9-59 220-271 (370)
314 2qr3_A Two-component system re 83.6 4.2 0.00014 22.8 5.9 58 15-77 66-124 (140)
315 1zfj_A Inosine monophosphate d 83.3 2 6.9E-05 30.7 5.0 44 14-57 259-302 (491)
316 3ffs_A Inosine-5-monophosphate 83.2 2 6.7E-05 30.7 4.8 42 15-57 171-212 (400)
317 1dbw_A Transcriptional regulat 82.9 4.4 0.00015 22.5 7.4 58 15-77 61-119 (126)
318 2v5b_A Triosephosphate isomera 82.9 2.4 8.3E-05 28.4 4.9 41 29-70 199-240 (244)
319 2qsj_A DNA-binding response re 82.8 5 0.00017 23.1 6.0 59 15-78 64-123 (154)
320 3cu5_A Two component transcrip 82.4 5.1 0.00017 22.9 7.1 58 15-77 63-121 (141)
321 3kxq_A Triosephosphate isomera 82.4 1.8 6.2E-05 29.6 4.2 40 29-68 227-267 (275)
322 2uv8_G Fatty acid synthase sub 82.3 0.94 3.2E-05 38.5 3.2 46 16-62 750-807 (2051)
323 1qkk_A DCTD, C4-dicarboxylate 82.2 5.4 0.00018 23.0 7.3 42 15-56 61-103 (155)
324 2hzg_A Mandelate racemase/muco 82.1 3.2 0.00011 29.0 5.6 52 9-61 227-281 (401)
325 2nql_A AGR_PAT_674P, isomerase 82.0 1.6 5.4E-05 30.5 3.9 48 9-57 240-289 (388)
326 3gl9_A Response regulator; bet 81.8 4.9 0.00017 22.3 6.7 58 15-77 60-120 (122)
327 2qxy_A Response regulator; reg 81.7 5.2 0.00018 22.6 6.8 58 15-77 61-119 (142)
328 3eqz_A Response regulator; str 81.7 1.4 4.9E-05 24.6 3.1 57 15-76 60-122 (135)
329 2gl5_A Putative dehydratase pr 81.4 2.5 8.7E-05 29.5 4.8 47 9-56 250-298 (410)
330 3b2n_A Uncharacterized protein 81.4 5.3 0.00018 22.4 7.2 58 15-77 63-121 (133)
331 1srr_A SPO0F, sporulation resp 81.3 5 0.00017 22.1 5.8 57 15-76 61-118 (124)
332 1tkk_A Similar to chloromucona 81.2 3.5 0.00012 28.3 5.4 50 9-59 219-270 (366)
333 3e96_A Dihydrodipicolinate syn 81.2 1.3 4.3E-05 30.4 3.1 57 4-60 160-217 (316)
334 1a04_A Nitrate/nitrite respons 80.9 7.4 0.00025 23.8 7.7 58 15-77 65-123 (215)
335 3cz5_A Two-component response 80.9 5.4 0.00018 22.9 5.6 43 15-57 65-108 (153)
336 3crn_A Response regulator rece 80.8 5.6 0.00019 22.3 7.9 58 15-77 61-119 (132)
337 2qde_A Mandelate racemase/muco 80.7 2.8 9.7E-05 29.2 4.9 50 7-57 219-270 (397)
338 1k68_A Phytochrome response re 80.7 5.4 0.00019 22.1 7.5 60 15-79 69-131 (140)
339 1yio_A Response regulatory pro 80.4 7.6 0.00026 23.6 7.3 56 15-75 62-118 (208)
340 2v82_A 2-dehydro-3-deoxy-6-pho 80.3 1.8 6.2E-05 27.3 3.5 44 14-58 43-88 (212)
341 1tzz_A Hypothetical protein L1 80.1 1.7 5.9E-05 30.3 3.6 50 9-59 242-297 (392)
342 3cwo_X Beta/alpha-barrel prote 79.7 3.2 0.00011 25.7 4.4 50 16-66 40-91 (237)
343 2pp0_A L-talarate/galactarate 79.6 2.9 9.9E-05 29.3 4.6 49 7-56 250-300 (398)
344 3f6p_A Transcriptional regulat 79.6 5.9 0.0002 21.8 6.1 57 15-77 60-117 (120)
345 3klo_A Transcriptional regulat 79.5 4.1 0.00014 25.4 5.0 58 15-77 68-127 (225)
346 3hdv_A Response regulator; PSI 79.5 6.2 0.00021 22.0 6.8 58 15-77 66-125 (136)
347 2ayx_A Sensor kinase protein R 79.4 10 0.00034 24.3 7.1 57 15-76 187-244 (254)
348 2pl1_A Transcriptional regulat 79.3 5.8 0.0002 21.6 8.4 60 15-79 58-118 (121)
349 3cfy_A Putative LUXO repressor 79.3 6.6 0.00023 22.3 7.8 58 15-77 62-120 (137)
350 3mqt_A Mandelate racemase/muco 79.2 4.2 0.00014 28.5 5.4 53 8-61 232-286 (394)
351 1sjd_A N-acylamino acid racema 79.1 3.7 0.00013 28.2 5.0 48 9-57 214-263 (368)
352 1r0m_A N-acylamino acid racema 79.0 3.6 0.00012 28.4 4.9 50 7-57 218-269 (375)
353 2qv0_A Protein MRKE; structura 79.0 6.7 0.00023 22.1 7.3 41 15-56 69-109 (143)
354 2gdq_A YITF; mandelate racemas 78.9 2.7 9.1E-05 29.3 4.2 47 9-56 217-265 (382)
355 2zc8_A N-acylamino acid racema 78.7 3.7 0.00013 28.2 4.9 50 7-57 211-262 (369)
356 3th6_A Triosephosphate isomera 78.7 2.6 8.8E-05 28.4 3.9 35 29-63 203-238 (249)
357 3cnb_A DNA-binding response re 78.4 6.8 0.00023 21.9 7.3 59 15-78 68-129 (143)
358 1k66_A Phytochrome response re 78.2 7.1 0.00024 21.9 6.6 60 15-79 76-138 (149)
359 2o56_A Putative mandelate race 78.1 2.7 9.2E-05 29.4 4.1 49 7-56 245-295 (407)
360 1qop_A Tryptophan synthase alp 78.0 3.9 0.00013 27.1 4.7 44 16-59 81-131 (268)
361 1ujp_A Tryptophan synthase alp 77.9 3.1 0.00011 28.0 4.2 45 16-61 79-130 (271)
362 3dg3_A Muconate cycloisomerase 77.8 5.2 0.00018 27.7 5.4 50 7-57 215-266 (367)
363 1o4u_A Type II quinolic acid p 77.7 4.8 0.00016 27.5 5.1 55 17-74 180-235 (285)
364 4dwd_A Mandelate racemase/muco 77.5 3.6 0.00012 28.9 4.6 51 8-59 222-273 (393)
365 3gt7_A Sensor protein; structu 77.2 8.3 0.00029 22.3 7.5 59 15-78 65-126 (154)
366 2ox4_A Putative mandelate race 77.2 2.6 8.8E-05 29.4 3.7 47 9-56 241-289 (403)
367 2poz_A Putative dehydratase; o 77.1 2.6 8.8E-05 29.4 3.7 47 9-56 231-279 (392)
368 2zay_A Response regulator rece 76.9 8 0.00027 21.9 7.6 59 15-78 66-127 (147)
369 3sy1_A UPF0001 protein YGGS; e 76.6 2.9 0.0001 27.6 3.8 49 16-66 180-232 (245)
370 1ea0_A Glutamate synthase [NAD 76.5 3.3 0.00011 34.3 4.6 34 28-61 1063-1097(1479)
371 3t8y_A CHEB, chemotaxis respon 76.4 9.3 0.00032 22.4 5.9 42 15-57 85-129 (164)
372 3mm4_A Histidine kinase homolo 76.3 7.2 0.00025 24.1 5.4 43 15-57 133-181 (206)
373 1p2f_A Response regulator; DRR 76.2 11 0.00037 23.1 7.9 59 15-78 57-116 (220)
374 3tji_A Mandelate racemase/muco 76.0 7 0.00024 27.7 5.8 52 7-59 252-305 (422)
375 3qfw_A Ribulose-1,5-bisphospha 75.8 7.9 0.00027 27.6 5.9 54 28-81 312-368 (378)
376 1jbe_A Chemotaxis protein CHEY 75.6 8 0.00027 21.3 7.4 59 15-78 63-124 (128)
377 3dzd_A Transcriptional regulat 75.5 16 0.00053 25.2 7.4 59 15-78 58-117 (368)
378 1ccw_A Protein (glutamate muta 75.5 10 0.00035 22.5 6.6 52 20-77 75-134 (137)
379 2r25_B Osmosensing histidine p 75.4 8.7 0.0003 21.6 5.3 56 15-75 66-123 (133)
380 3sbf_A Mandelate racemase / mu 75.3 5.6 0.00019 27.9 5.1 54 7-61 231-286 (401)
381 2vp8_A Dihydropteroate synthas 75.3 11 0.00036 26.2 6.4 40 20-60 108-147 (318)
382 3i4k_A Muconate lactonizing en 75.1 8 0.00028 26.9 5.8 52 9-61 226-279 (383)
383 3q9s_A DNA-binding response re 75.0 13 0.00046 23.6 6.6 58 15-78 95-153 (249)
384 2rdx_A Mandelate racemase/muco 75.0 10 0.00036 26.1 6.4 46 16-62 225-272 (379)
385 3a10_A Response regulator; pho 74.8 3.5 0.00012 22.4 3.3 40 15-55 59-98 (116)
386 3stp_A Galactonate dehydratase 74.7 5.6 0.00019 28.2 5.0 48 8-56 261-310 (412)
387 2qq6_A Mandelate racemase/muco 74.6 4.9 0.00017 28.1 4.6 47 9-56 242-290 (410)
388 3ozy_A Putative mandelate race 74.5 7.3 0.00025 27.2 5.5 52 9-61 227-281 (389)
389 3v3w_A Starvation sensing prot 74.5 4.8 0.00017 28.6 4.6 49 8-57 257-307 (424)
390 3n53_A Response regulator rece 74.5 4.9 0.00017 22.7 4.0 58 16-78 61-121 (140)
391 1gvf_A Tagatose-bisphosphate a 74.4 9.6 0.00033 26.0 5.9 45 15-60 189-235 (286)
392 2ze3_A DFA0005; organic waste 74.2 17 0.00059 24.5 7.4 45 17-62 193-237 (275)
393 5rub_A Rubisco (ribulose-1,5-b 74.2 8.5 0.00029 28.4 5.9 51 29-79 386-440 (490)
394 3vcn_A Mannonate dehydratase; 74.0 5.1 0.00017 28.5 4.6 48 9-57 259-308 (425)
395 1kgs_A DRRD, DNA binding respo 74.0 13 0.00043 22.8 6.6 59 15-78 60-119 (225)
396 3i42_A Response regulator rece 73.9 3.7 0.00013 22.7 3.3 56 15-76 61-119 (127)
397 3jr2_A Hexulose-6-phosphate sy 73.9 3.1 0.0001 26.6 3.2 43 15-57 45-90 (218)
398 4dpp_A DHDPS 2, dihydrodipicol 73.7 17 0.0006 25.5 7.3 70 5-74 100-178 (360)
399 2yw3_A 4-hydroxy-2-oxoglutarat 73.6 5.4 0.00018 25.5 4.3 43 14-58 49-91 (207)
400 3cg0_A Response regulator rece 73.6 9.6 0.00033 21.2 7.3 58 15-78 69-127 (140)
401 1efv_A Electron transfer flavo 73.5 17 0.00057 24.9 7.0 72 8-79 11-84 (315)
402 3rcy_A Mandelate racemase/muco 73.4 6.4 0.00022 28.1 5.0 49 7-56 233-283 (433)
403 3jva_A Dipeptide epimerase; en 73.3 7.6 0.00026 26.7 5.3 52 9-61 215-268 (354)
404 1p90_A NAFY protein, hypotheti 73.1 13 0.00044 22.5 6.1 46 28-77 66-111 (145)
405 2pln_A HP1043, response regula 73.0 10 0.00034 21.2 6.6 57 15-77 72-131 (137)
406 3luf_A Two-component system re 73.0 16 0.00055 23.5 8.3 59 15-78 183-244 (259)
407 2hxt_A L-fuconate dehydratase; 72.6 4.2 0.00014 28.8 3.9 50 7-56 272-323 (441)
408 3mkc_A Racemase; metabolic pro 72.5 5.8 0.0002 27.8 4.6 49 8-57 237-287 (394)
409 1ofd_A Ferredoxin-dependent gl 72.5 4.1 0.00014 33.9 4.2 33 29-61 1099-1132(1520)
410 3r4e_A Mandelate racemase/muco 71.9 4.8 0.00016 28.5 4.1 48 9-57 252-301 (418)
411 1ys7_A Transcriptional regulat 71.8 9.6 0.00033 23.5 5.1 59 15-78 65-124 (233)
412 2ztj_A Homocitrate synthase; ( 71.7 19 0.00066 25.1 7.1 66 12-77 49-120 (382)
413 3eb2_A Putative dihydrodipicol 71.6 20 0.00069 24.1 7.2 72 5-76 45-125 (300)
414 2h6r_A Triosephosphate isomera 71.6 8.4 0.00029 24.8 4.9 39 18-59 43-91 (219)
415 4e5t_A Mandelate racemase / mu 71.5 11 0.00039 26.4 5.9 50 8-58 239-290 (404)
416 1wa3_A 2-keto-3-deoxy-6-phosph 71.4 4.1 0.00014 25.4 3.3 40 15-54 47-87 (205)
417 3na8_A Putative dihydrodipicol 71.3 21 0.00073 24.2 8.1 72 5-76 65-145 (315)
418 2rjn_A Response regulator rece 71.1 12 0.00042 21.4 7.6 57 15-76 65-123 (154)
419 3toy_A Mandelate racemase/muco 71.1 7.8 0.00027 27.1 5.0 49 7-56 243-293 (383)
420 1zgz_A Torcad operon transcrip 70.9 11 0.00036 20.5 7.6 59 15-79 60-119 (122)
421 3ugv_A Enolase; enzyme functio 70.8 8.3 0.00028 27.0 5.1 49 7-56 249-299 (390)
422 3heb_A Response regulator rece 70.8 12 0.00042 21.3 8.1 42 15-56 73-117 (152)
423 3s1x_A Probable transaldolase; 70.6 13 0.00044 24.5 5.7 64 16-79 143-214 (223)
424 4e4u_A Mandalate racemase/muco 70.6 12 0.00041 26.4 5.9 50 7-57 231-282 (412)
425 3grc_A Sensor protein, kinase; 70.5 9.5 0.00033 21.3 4.6 60 15-79 64-127 (140)
426 3qze_A DHDPS, dihydrodipicolin 70.3 23 0.00077 24.1 8.7 72 5-76 64-144 (314)
427 1mzh_A Deoxyribose-phosphate a 70.1 15 0.00051 23.7 5.9 62 14-76 102-171 (225)
428 2nv1_A Pyridoxal biosynthesis 70.0 11 0.00038 25.3 5.4 43 16-62 66-111 (305)
429 1vcf_A Isopentenyl-diphosphate 70.0 3.6 0.00012 28.1 3.0 40 16-57 170-212 (332)
430 2zvi_A 2,3-diketo-5-methylthio 69.7 12 0.00041 27.0 5.8 51 29-79 342-395 (425)
431 4dxk_A Mandelate racemase / mu 69.6 7.3 0.00025 27.3 4.6 51 7-58 240-292 (400)
432 1chr_A Chloromuconate cycloiso 69.5 19 0.00066 24.7 6.7 52 9-61 220-273 (370)
433 1ydn_A Hydroxymethylglutaryl-C 69.4 22 0.00075 23.6 6.9 62 15-78 59-127 (295)
434 2hqr_A Putative transcriptiona 69.2 13 0.00046 22.7 5.4 56 15-76 54-112 (223)
435 3fa4_A 2,3-dimethylmalate lyas 69.1 25 0.00085 24.1 8.2 47 16-62 194-244 (302)
436 2isw_A Putative fructose-1,6-b 68.6 9 0.00031 26.7 4.8 43 17-60 193-258 (323)
437 3qfe_A Putative dihydrodipicol 68.6 5.8 0.0002 27.1 3.8 45 16-61 180-224 (318)
438 3l0g_A Nicotinate-nucleotide p 68.5 8.9 0.0003 26.5 4.7 53 18-73 196-248 (300)
439 3p3b_A Mandelate racemase/muco 68.5 10 0.00035 26.4 5.1 44 10-56 234-284 (392)
440 3cg4_A Response regulator rece 68.5 8.1 0.00028 21.7 4.0 58 15-77 65-125 (142)
441 3tak_A DHDPS, dihydrodipicolin 68.5 24 0.0008 23.6 8.7 72 5-76 42-122 (291)
442 3h5i_A Response regulator/sens 68.4 14 0.00046 20.8 5.3 57 15-77 65-122 (140)
443 1i4n_A Indole-3-glycerol phosp 68.4 13 0.00045 24.7 5.5 50 12-62 85-135 (251)
444 3daq_A DHDPS, dihydrodipicolin 68.4 6.7 0.00023 26.4 4.0 55 5-60 156-210 (292)
445 3l21_A DHDPS, dihydrodipicolin 68.3 25 0.00084 23.8 8.7 72 5-76 56-136 (304)
446 3h1g_A Chemotaxis protein CHEY 68.3 13 0.00044 20.6 6.8 58 15-77 65-125 (129)
447 3flu_A DHDPS, dihydrodipicolin 67.9 11 0.00037 25.4 5.0 56 4-61 160-215 (297)
448 2zbt_A Pyridoxal biosynthesis 67.9 7.8 0.00027 25.8 4.3 39 15-54 65-104 (297)
449 3dip_A Enolase; structural gen 67.6 17 0.0006 25.5 6.2 54 7-61 243-299 (410)
450 3t6c_A RSPA, putative MAND fam 67.5 13 0.00045 26.5 5.6 52 7-59 270-323 (440)
451 1mvo_A PHOP response regulator 67.5 14 0.00046 20.5 8.2 58 15-77 61-119 (136)
452 3t6k_A Response regulator rece 67.4 14 0.00049 20.7 7.2 59 15-78 62-123 (136)
453 2im5_A Nicotinate phosphoribos 67.3 7.6 0.00026 27.6 4.3 33 30-62 299-336 (394)
454 3idf_A USP-like protein; unive 67.3 8.3 0.00028 21.8 3.9 30 29-59 81-110 (138)
455 3r8r_A Transaldolase; pentose 67.3 11 0.00038 24.7 4.8 63 15-77 140-210 (212)
456 1s2w_A Phosphoenolpyruvate pho 67.1 16 0.00055 24.9 5.8 52 9-60 129-193 (295)
457 1i3c_A Response regulator RCP1 67.1 15 0.00052 20.9 8.0 59 15-78 75-136 (149)
458 3q45_A Mandelate racemase/muco 66.6 17 0.00059 25.0 5.9 55 7-62 214-270 (368)
459 1rqb_A Transcarboxylase 5S sub 66.4 17 0.00057 27.0 6.1 49 13-61 80-141 (539)
460 3mwc_A Mandelate racemase/muco 66.0 14 0.00047 26.0 5.4 51 7-58 234-286 (400)
461 3my9_A Muconate cycloisomerase 65.9 11 0.00037 26.1 4.8 50 7-57 221-272 (377)
462 3fk4_A Rubisco-like protein; s 65.8 19 0.00064 25.9 6.1 52 29-80 330-384 (414)
463 2nx9_A Oxaloacetate decarboxyl 65.6 24 0.00082 25.6 6.7 49 13-61 63-124 (464)
464 1wuf_A Hypothetical protein LI 65.6 9.9 0.00034 26.5 4.6 52 7-59 231-284 (393)
465 3pm6_A Putative fructose-bisph 65.6 24 0.00083 24.4 6.4 46 16-61 207-255 (306)
466 3s5o_A 4-hydroxy-2-oxoglutarat 65.5 8.4 0.00029 26.1 4.1 54 5-59 170-223 (307)
467 1nvm_A HOA, 4-hydroxy-2-oxoval 65.4 6 0.00021 27.2 3.4 51 5-55 169-224 (345)
468 2qiw_A PEP phosphonomutase; st 65.4 23 0.00079 23.6 6.2 41 18-59 194-238 (255)
469 3rr1_A GALD, putative D-galact 65.2 9.5 0.00032 26.9 4.5 50 7-57 208-259 (405)
470 1rvg_A Fructose-1,6-bisphospha 65.2 20 0.00067 24.8 5.9 45 15-60 189-256 (305)
471 2j48_A Two-component sensor ki 65.1 8.7 0.0003 20.4 3.5 39 15-55 59-99 (119)
472 3lye_A Oxaloacetate acetyl hyd 64.9 31 0.0011 23.7 7.3 47 16-62 202-252 (307)
473 3m5v_A DHDPS, dihydrodipicolin 64.6 29 0.001 23.3 9.2 72 5-76 48-129 (301)
474 2qdd_A Mandelate racemase/muco 64.6 18 0.00063 24.8 5.8 50 9-61 220-271 (378)
475 3si9_A DHDPS, dihydrodipicolin 64.6 30 0.001 23.5 8.8 72 5-76 63-143 (315)
476 2qvg_A Two component response 64.5 8.3 0.00028 21.6 3.5 54 15-73 73-129 (143)
477 2jba_A Phosphate regulon trans 64.2 8.7 0.0003 21.0 3.5 59 15-78 60-121 (127)
478 2qyg_A Ribulose bisphosphate c 63.6 19 0.00064 26.3 5.8 51 29-79 371-425 (452)
479 2ps2_A Putative mandelate race 63.5 13 0.00044 25.5 4.8 45 16-61 227-273 (371)
480 1ybe_A Naprtase, nicotinate ph 63.5 8.7 0.0003 27.8 4.0 34 29-62 338-375 (449)
481 1ykw_A Rubisco-like protein; b 63.3 21 0.0007 25.9 5.9 52 28-79 350-405 (435)
482 3inp_A D-ribulose-phosphate 3- 63.2 30 0.001 22.9 7.2 58 16-75 73-132 (246)
483 1vlp_A Naprtase, nicotinate ph 63.0 8 0.00027 27.9 3.8 33 30-62 333-371 (441)
484 2pcq_A Putative dihydrodipicol 63.0 31 0.001 23.0 7.0 70 5-74 38-113 (283)
485 3tqv_A Nicotinate-nucleotide p 62.8 14 0.00049 25.2 4.8 52 18-72 187-238 (287)
486 3dgb_A Muconate cycloisomerase 62.7 16 0.00054 25.4 5.2 51 7-58 224-276 (382)
487 3eoo_A Methylisocitrate lyase; 62.5 34 0.0012 23.4 6.9 47 16-63 195-245 (298)
488 4e4f_A Mannonate dehydratase; 62.5 7.9 0.00027 27.5 3.6 47 9-56 260-308 (426)
489 2v5j_A 2,4-dihydroxyhept-2-ENE 62.0 11 0.00037 25.5 4.1 53 6-60 206-261 (287)
490 3c98_A Syntaxin-binding protei 62.0 0.45 1.5E-05 35.2 -3.0 42 30-71 549-595 (606)
491 1eo1_A Hypothetical protein MT 61.9 18 0.00061 20.8 4.7 41 29-74 65-105 (124)
492 3flu_A DHDPS, dihydrodipicolin 61.9 33 0.0011 23.0 9.3 72 5-76 48-128 (297)
493 2vc6_A MOSA, dihydrodipicolina 61.8 17 0.00058 24.4 5.0 53 5-59 155-207 (292)
494 1ny5_A Transcriptional regulat 61.7 36 0.0012 23.4 7.7 42 15-56 58-100 (387)
495 1yir_A Naprtase 2, nicotinate 61.7 11 0.00039 26.8 4.4 34 30-63 313-351 (408)
496 1xg4_A Probable methylisocitra 61.6 17 0.00058 24.8 5.1 42 14-56 64-113 (295)
497 1nmo_A Hypothetical protein YB 61.6 9.5 0.00032 25.1 3.7 27 32-58 168-194 (247)
498 2r91_A 2-keto-3-deoxy-(6-phosp 61.5 33 0.0011 22.8 8.7 71 5-76 39-117 (286)
499 3r79_A Uncharacterized protein 61.5 14 0.00047 24.5 4.5 50 15-67 176-225 (244)
500 1o97_C Electron transferring f 61.3 33 0.0011 22.8 7.1 68 12-79 35-110 (264)
No 1
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.92 E-value=2.2e-25 Score=150.06 Aligned_cols=81 Identities=59% Similarity=1.068 Sum_probs=77.5
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
|+|+|||+||+|.|+.++||+++++..++++|+|||||+++|++++.++|||++|+||+||+++||++++++|++.+++.
T Consensus 141 msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~~ 220 (228)
T 3ovp_A 141 MTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEA 220 (228)
T ss_dssp ESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred eeecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999998878999999999999999999999999999999999999999999999988776
Q ss_pred h
Q psy11601 81 L 81 (82)
Q Consensus 81 ~ 81 (82)
+
T Consensus 221 ~ 221 (228)
T 3ovp_A 221 A 221 (228)
T ss_dssp H
T ss_pred H
Confidence 4
No 2
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.92 E-value=2.2e-25 Score=151.86 Aligned_cols=79 Identities=39% Similarity=0.659 Sum_probs=72.5
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHh----CCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLREN----YPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~----~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
|+|+|||+||+|.|+.++||++++++ .++++|+|||||+++|++++.++|||++|+||+||+++||++++++|++.
T Consensus 163 MsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~ 242 (246)
T 3inp_A 163 MSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDE 242 (246)
T ss_dssp ECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred eeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHH
Confidence 79999999999999999999999875 34689999999999999999999999999999999999999999999998
Q ss_pred HHH
Q psy11601 77 VQK 79 (82)
Q Consensus 77 ~~~ 79 (82)
+++
T Consensus 243 i~~ 245 (246)
T 3inp_A 243 LNK 245 (246)
T ss_dssp HHT
T ss_pred Hhh
Confidence 875
No 3
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=99.92 E-value=2.6e-25 Score=149.83 Aligned_cols=81 Identities=57% Similarity=0.886 Sum_probs=76.2
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
|+|||||+||+|.|+.++||+++++..++++|+|||||+++|++++.++|||++|+||+||+++||++++++|++.+++.
T Consensus 145 msV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~~~ 224 (227)
T 1tqx_A 145 MTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQKY 224 (227)
T ss_dssp ESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHHHC
T ss_pred eeeccCCCCcccchHHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHHH
Confidence 89999999999999999999999998768999999999999999999999999999999999999999999999887764
Q ss_pred h
Q psy11601 81 L 81 (82)
Q Consensus 81 ~ 81 (82)
+
T Consensus 225 ~ 225 (227)
T 1tqx_A 225 L 225 (227)
T ss_dssp -
T ss_pred h
Confidence 3
No 4
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.90 E-value=5.2e-24 Score=143.70 Aligned_cols=79 Identities=30% Similarity=0.503 Sum_probs=73.4
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhC----CCCcEEEEcCCCcccHHHHHHcCCCEEEEe-ccccCCCC-HHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENY----PTLNIEVDGGVGPNTIDECAKAGANWIVSG-TAVINCPD-RIQAISTLK 74 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~----~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g-s~i~~~~d-~~~~~~~l~ 74 (82)
|+|||||+||+|.|+.++||+++++.. ++++|+|||||+++|+.++.++|||++|+| |+||+++| +++++++|+
T Consensus 135 msV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~ 214 (231)
T 3ctl_A 135 MTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMT 214 (231)
T ss_dssp ESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHH
T ss_pred eeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHH
Confidence 899999999999999999999998763 368999999999999999999999999999 99999888 999999999
Q ss_pred HHHHH
Q psy11601 75 SSVQK 79 (82)
Q Consensus 75 ~~~~~ 79 (82)
+.+++
T Consensus 215 ~~~~~ 219 (231)
T 3ctl_A 215 AQILA 219 (231)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 87764
No 5
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=99.87 E-value=4.8e-23 Score=139.54 Aligned_cols=76 Identities=20% Similarity=0.325 Sum_probs=70.8
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhCC----CCcEEEEcCCCcccHHHHHH--cCCCEEEEeccccCCCCHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGGVGPNTIDECAK--AGANWIVSGTAVINCPDRIQAISTLK 74 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~~----~~~i~~dGGI~~~ni~~~~~--~Gad~vv~gs~i~~~~d~~~~~~~l~ 74 (82)
|||+|||+||.|.|..++||+++++... +++|+|||||+.+|+.++.+ +|||++|+||+||++ ||++++++|+
T Consensus 155 Msv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~~~aGad~~VvGSaIf~~-d~~~~~~~l~ 233 (237)
T 3cu2_A 155 LTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGSALFSG-ELKTNLKVWK 233 (237)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECGGGGSS-CHHHHHHHHH
T ss_pred eeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHHhCCCCcEEEEeeHHhCC-CHHHHHHHHH
Confidence 7999999999999999999999998742 58999999999999999999 999999999999998 9999999998
Q ss_pred HHH
Q psy11601 75 SSV 77 (82)
Q Consensus 75 ~~~ 77 (82)
+.+
T Consensus 234 ~~~ 236 (237)
T 3cu2_A 234 SSI 236 (237)
T ss_dssp HHC
T ss_pred Hhh
Confidence 754
No 6
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.86 E-value=2.1e-21 Score=129.68 Aligned_cols=79 Identities=58% Similarity=0.968 Sum_probs=75.0
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
|+++||++||+|.+..+++++++++..+++|++++|||+.+|+.++.++|||++|+||+||+++||++++++|++.+++
T Consensus 145 ~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~~~~~ 223 (228)
T 1h1y_A 145 MTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVEG 223 (228)
T ss_dssp ESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred EeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHHHHH
Confidence 6899999999999999999999999876799999999999999999999999999999999999999999999988765
No 7
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.86 E-value=2.2e-22 Score=135.13 Aligned_cols=78 Identities=45% Similarity=0.750 Sum_probs=68.3
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhC----CCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENY----PTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~----~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
|+|+|||+||+|.+..+++|+++++.. +++||+|||||+.+|+.++.++|||++|+||+||+++||++++++|++.
T Consensus 141 msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~~ 220 (230)
T 1tqj_A 141 MSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNS 220 (230)
T ss_dssp ESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHTC
T ss_pred EEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHH
Confidence 799999999999999999999998864 3799999999999999999999999999999999999999999999875
Q ss_pred HH
Q psy11601 77 VQ 78 (82)
Q Consensus 77 ~~ 78 (82)
++
T Consensus 221 ~~ 222 (230)
T 1tqj_A 221 KR 222 (230)
T ss_dssp CC
T ss_pred HH
Confidence 44
No 8
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.77 E-value=7.8e-19 Score=115.56 Aligned_cols=78 Identities=40% Similarity=0.705 Sum_probs=70.9
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhC----CCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENY----PTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~----~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
|+++|||+||.|.+..+++++++++.. +++|+.++|||+++|+.++.++|+|++++||+||+++||++++++|++.
T Consensus 138 ~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 138 MTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp ESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred EEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 689999999999999999988888753 2689999999999999999999999999999999999999999999876
Q ss_pred HH
Q psy11601 77 VQ 78 (82)
Q Consensus 77 ~~ 78 (82)
++
T Consensus 218 ~~ 219 (220)
T 2fli_A 218 LN 219 (220)
T ss_dssp HC
T ss_pred hc
Confidence 53
No 9
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.77 E-value=2.3e-19 Score=119.28 Aligned_cols=78 Identities=45% Similarity=0.720 Sum_probs=70.9
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhCC----CCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENYP----TLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~~----~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
|+++|||+||.|.+..+++++++++..+ ++|++++|||+++|+.++.++|||++++||+||+++||.+++++|++.
T Consensus 147 ~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~~~ 226 (230)
T 1rpx_A 147 MSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKTS 226 (230)
T ss_dssp ESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHTC
T ss_pred EEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHHHH
Confidence 6889999999999999999998887643 689999999999999999999999999999999999999999999865
Q ss_pred HH
Q psy11601 77 VQ 78 (82)
Q Consensus 77 ~~ 78 (82)
++
T Consensus 227 ~~ 228 (230)
T 1rpx_A 227 KR 228 (230)
T ss_dssp CC
T ss_pred Hh
Confidence 43
No 10
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.72 E-value=8.5e-18 Score=110.10 Aligned_cols=78 Identities=17% Similarity=0.269 Sum_probs=72.7
Q ss_pred ccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 2 TVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 2 ~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
+++||+.||.+.+..+++++++++..+++|++++|||+++|+.++.++|||++++||+||+++||.+++++|++.+++
T Consensus 132 ~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 132 AVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp EEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred EEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 578999999998888999999999876799999999999999999999999999999999999999999999988875
No 11
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.71 E-value=1.2e-18 Score=115.60 Aligned_cols=77 Identities=16% Similarity=0.340 Sum_probs=71.3
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
|+++|+++||.|.++.+++|++++. +++|++++|||+++|+.++.++|||++|+||+||+++||.+++ +|++.+++.
T Consensus 140 ~~~~~~~~g~~~~~~~l~~i~~~~~--~~~pi~v~GGI~~~~~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~~~ 216 (218)
T 3jr2_A 140 RSRDAELAGIGWTTDDLDKMRQLSA--LGIELSITGGIVPEDIYLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQIDRF 216 (218)
T ss_dssp CCHHHHHHTCCSCHHHHHHHHHHHH--TTCEEEEESSCCGGGGGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHHHH
T ss_pred eccccccCCCcCCHHHHHHHHHHhC--CCCCEEEECCCCHHHHHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHHhh
Confidence 5678889999999999999999886 3689999999999999999999999999999999999999999 999988865
No 12
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=99.70 E-value=1.6e-17 Score=109.52 Aligned_cols=79 Identities=19% Similarity=0.291 Sum_probs=70.4
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcc--cHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPN--TIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~--ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
|+++||++||.|.+...++++++++..+.-++.++|||+.+ |+.++.++|+|.+++||+||+++||.++++++++.++
T Consensus 127 ~a~~~G~~G~~~~~~~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~~l~~~i~ 206 (208)
T 2czd_A 127 VANEIEPFGVIAPGTRPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIYDEIR 206 (208)
T ss_dssp HHHHHCCSEEECCCSSTHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHC
T ss_pred HHHHhCCcEEEECCCChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcCCCHHHHHHHHHHHHh
Confidence 67899999999999999999999987653235599999999 9999999999999999999999999999999998776
Q ss_pred H
Q psy11601 79 K 79 (82)
Q Consensus 79 ~ 79 (82)
+
T Consensus 207 ~ 207 (208)
T 2czd_A 207 G 207 (208)
T ss_dssp -
T ss_pred c
Confidence 4
No 13
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=99.65 E-value=7.1e-17 Score=106.81 Aligned_cols=74 Identities=11% Similarity=0.187 Sum_probs=63.0
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhC-CCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENY-PTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~-~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
|+++|||+| ..++++++++.. +++|+.++|||+++|+.++.++|||.+|+||+||+++||.++++++++.+++
T Consensus 140 ~~~~~G~~g------~~~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~~ 213 (216)
T 1q6o_A 140 DAQAAGVAW------GEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp HHHHTTCCC------CHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCC------CHHHHHHHHHhcCCCCcEEEECCcChhhHHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHHh
Confidence 578899998 345555555543 2688999999999999999999999999999999999999999999998876
Q ss_pred h
Q psy11601 80 Y 80 (82)
Q Consensus 80 ~ 80 (82)
.
T Consensus 214 ~ 214 (216)
T 1q6o_A 214 L 214 (216)
T ss_dssp H
T ss_pred h
Confidence 4
No 14
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.61 E-value=5.5e-16 Score=101.20 Aligned_cols=72 Identities=22% Similarity=0.235 Sum_probs=62.1
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
|++.|++.|+.+.+ ++|++++.. ++|++++|||+++|+.++.++|||++++||+||+++||.+++++|++.+
T Consensus 135 ~~~~~~~~g~~~~~---~~i~~~~~~--~~pi~v~GGI~~~~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~~~ 206 (207)
T 3ajx_A 135 AGLDEQAKPGFDLN---GLLAAGEKA--RVPFSVAGGVKVATIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRAAI 206 (207)
T ss_dssp CCHHHHTSTTCCTH---HHHHHHHHH--TSCEEEESSCCGGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHTC
T ss_pred ecccccccCCCchH---HHHHHhhCC--CCCEEEECCcCHHHHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHHHh
Confidence 34566678887665 888888775 5799999999999999999999999999999999999999999988643
No 15
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=99.53 E-value=3.3e-15 Score=100.91 Aligned_cols=75 Identities=19% Similarity=0.293 Sum_probs=66.2
Q ss_pred CCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcc-----------cHHHHHHcCCCEEEEeccccCCCCHHHHHHH
Q psy11601 4 EPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPN-----------TIDECAKAGANWIVSGTAVINCPDRIQAIST 72 (82)
Q Consensus 4 ~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~-----------ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~ 72 (82)
+|+++++.|.+...+ ++++++..++.++.++|||+++ |+.++.++|+|.+|+||+||+++||.+++++
T Consensus 158 ~~~~G~~g~V~~~~e-i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~ 236 (245)
T 1eix_A 158 TQKCGLDGVVCSAQE-AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKA 236 (245)
T ss_dssp HHHTTCSEEECCGGG-HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSSHHHHHHH
T ss_pred HHHcCCCeEEeCHHH-HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCCHHHHHHH
Confidence 677778889988888 8888887555689999999999 9999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy11601 73 LKSSVQK 79 (82)
Q Consensus 73 l~~~~~~ 79 (82)
+++.+++
T Consensus 237 l~~~i~~ 243 (245)
T 1eix_A 237 INASLQR 243 (245)
T ss_dssp HHHHTC-
T ss_pred HHHHHHh
Confidence 9887654
No 16
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=99.52 E-value=5.9e-15 Score=98.60 Aligned_cols=76 Identities=17% Similarity=0.296 Sum_probs=62.7
Q ss_pred CCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHhh
Q psy11601 4 EPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 4 ~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~~ 81 (82)
.+++.|+...+..+++|++.... +++|+|||||+++|++++.++|||.+|+||+||+++||.++++++++.++++.
T Consensus 145 ~~~~~Gvv~s~~e~~~ir~~~~~--~~~i~v~gGI~~~~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~~~~ 220 (221)
T 3exr_A 145 DALLAGETWGEKDLNKVKKLIEM--GFRVSVTGGLSVDTLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIKRIW 220 (221)
T ss_dssp HHHHHTCCCCHHHHHHHHHHHHH--TCEEEEESSCCGGGGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred hcCCCccccCHHHHHHHHHhhcC--CceEEEECCCCHHHHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHHHHh
Confidence 34445665555556666665543 58899999999999999999999999999999999999999999999988764
No 17
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=99.50 E-value=6.7e-15 Score=98.97 Aligned_cols=79 Identities=13% Similarity=0.151 Sum_probs=68.0
Q ss_pred CccC-CCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccH-----------HHHHHcCCCEEEEeccccCCCCHHH
Q psy11601 1 MTVE-PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTI-----------DECAKAGANWIVSGTAVINCPDRIQ 68 (82)
Q Consensus 1 m~v~-pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni-----------~~~~~~Gad~vv~gs~i~~~~d~~~ 68 (82)
|+++ |+++++.|.+.. ++++++++..++.++.++|||++++. .++.++|+|.+|+||+||+++||.+
T Consensus 147 ma~~~~~~G~~g~v~~~-~~i~~lr~~~~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~dp~~ 225 (239)
T 1dbt_A 147 YSKQAEESGLDGVVCSV-HEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVK 225 (239)
T ss_dssp HHHHHHHTTCSEEECCG-GGHHHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSCHHH
T ss_pred HHHHHHHhCCCEEEECH-HHHHHHHHhcCCCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCCHHH
Confidence 3444 677777798877 88888888765568999999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy11601 69 AISTLKSSVQKY 80 (82)
Q Consensus 69 ~~~~l~~~~~~~ 80 (82)
+++++++.++++
T Consensus 226 a~~~l~~~i~~~ 237 (239)
T 1dbt_A 226 AYKAVRLEWEGI 237 (239)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 999999887643
No 18
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=99.48 E-value=1.2e-14 Score=98.09 Aligned_cols=78 Identities=14% Similarity=0.203 Sum_probs=65.9
Q ss_pred CccC-CCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcc-----------cHHHHHHcCCCEEEEeccccCCCCHHH
Q psy11601 1 MTVE-PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPN-----------TIDECAKAGANWIVSGTAVINCPDRIQ 68 (82)
Q Consensus 1 m~v~-pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~-----------ni~~~~~~Gad~vv~gs~i~~~~d~~~ 68 (82)
|+++ |+++++.|.+...+ ++++++..+..++.++|||+++ |+.++.++|+|.+|+||+||+++||.+
T Consensus 148 ma~~~~~~G~~g~V~~~~e-i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~ 226 (246)
T 2yyu_A 148 YAALAKESGLDGVVCSANE-AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAADPLR 226 (246)
T ss_dssp HHHHHHHHTCCEEECCHHH-HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHhCCCEEEeCHHH-HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCCHHH
Confidence 3454 77778889888887 8888876543459999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy11601 69 AISTLKSSVQK 79 (82)
Q Consensus 69 ~~~~l~~~~~~ 79 (82)
+++++++.+++
T Consensus 227 a~~~l~~~i~~ 237 (246)
T 2yyu_A 227 TYARLQHEWNG 237 (246)
T ss_dssp HHHHHHHHCC-
T ss_pred HHHHHHHHHHH
Confidence 99999886643
No 19
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.46 E-value=3.9e-13 Score=88.42 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=66.3
Q ss_pred cCCCCCCCC-CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 3 VEPGFGGQK-FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 3 v~pG~~gq~-~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
+.|.+..+. +.+..++.++++++..+++|+.++|||+++|+.++.++|++++++||+++..+|+.+.+++|++.+++.
T Consensus 145 v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 145 IYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTY 223 (227)
T ss_dssp SSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHHHhc
Confidence 456555554 566778889998887634899999999999999999999999999999999899999999999888764
No 20
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.44 E-value=6.6e-13 Score=86.46 Aligned_cols=77 Identities=19% Similarity=0.207 Sum_probs=64.4
Q ss_pred cCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 3 VEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 3 v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
+.|++..+.+.+..++.++++++.. ++|+.++|||+++|+.++.++|++++++||+++..+|+.+.+++|++.+++.
T Consensus 137 ~~~~~~~~~~~~~~~~~l~~l~~~~-~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 213 (215)
T 1xi3_A 137 VFPTKTKEDARVIGLEGLRKIVESV-KIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEEV 213 (215)
T ss_dssp SSCC----CCCCCHHHHHHHHHHHC-SSCEEEESSCCTTTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCCCCcCHHHHHHHHHhC-CCCEEEECCcCHHHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHhhc
Confidence 3455555556777889999988876 7899999999999999999999999999999999899999999999888754
No 21
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=99.43 E-value=4.6e-13 Score=90.73 Aligned_cols=68 Identities=21% Similarity=0.139 Sum_probs=59.6
Q ss_pred CCcchHHHHHHHHHhC-CCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 12 FMQDMMPKVKWLRENY-PTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~-~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
..+..++.++++++.. .++|++++|||+++|+.++.++||++|+++|+||+++||.+++++|++.+++
T Consensus 173 ~~~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~~~~ 241 (243)
T 3o63_A 173 RAAPGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTA 241 (243)
T ss_dssp --CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHHHHT
T ss_pred cchhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHh
Confidence 3466788899988763 3799999999999999999999999999999999999999999999998865
No 22
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.41 E-value=1e-12 Score=86.68 Aligned_cols=74 Identities=12% Similarity=0.229 Sum_probs=59.9
Q ss_pred CCCCCCCC---CcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 5 PGFGGQKF---MQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 5 pG~~gq~~---~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
|.|.++.+ .+..++.++++++.. ++|++++|||+++|+.++.++|++++++||++|.++|+.+.+++|++.+++
T Consensus 138 ~~f~~~~~~g~~~~~~~~l~~~~~~~-~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 214 (221)
T 1yad_A 138 HVFETDCKKGLEGRGVSLLSDIKQRI-SIPVIAIGGMTPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKE 214 (221)
T ss_dssp CCC----------CHHHHHHHHHHHC-CSCEEEESSCCGGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CccccCCCCCCCCCCHHHHHHHHHhC-CCCEEEECCCCHHHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHH
Confidence 44444433 356788899988775 689999999999999999999999999999999988999999999987764
No 23
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.38 E-value=1.8e-13 Score=91.46 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=58.2
Q ss_pred ccCCCCCCCC--CCcchHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCCC--CHHHHHHHHHHH
Q psy11601 2 TVEPGFGGQK--FMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINCP--DRIQAISTLKSS 76 (82)
Q Consensus 2 ~v~pG~~gq~--~~~~~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~~--d~~~~~~~l~~~ 76 (82)
++ ||+.|++ +.+..++.++++++.. ++|+.++|||+. +|+.++.++|||++++||++|+.. ++ ++++++.+.
T Consensus 164 ~~-~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~~~~~~-~~~~~~~~~ 240 (248)
T 1geq_A 164 SL-YGTTGAREEIPKTAYDLLRRAKRIC-RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKG-REATEFLKK 240 (248)
T ss_dssp CC-C-------CCCHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHG-GGCHHHHHH
T ss_pred EC-CccCCCCCCCChhHHHHHHHHHhhc-CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhhHhhCh-HHHHHHHHH
Confidence 55 8988886 7788899999999886 699999999999 999999999999999999999752 34 566666666
Q ss_pred HHHh
Q psy11601 77 VQKY 80 (82)
Q Consensus 77 ~~~~ 80 (82)
+++.
T Consensus 241 ~~~~ 244 (248)
T 1geq_A 241 KVEE 244 (248)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 24
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.32 E-value=3e-12 Score=86.48 Aligned_cols=74 Identities=15% Similarity=0.281 Sum_probs=60.3
Q ss_pred CCCCCC--CCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCC----CCHHH---HHHHHH
Q psy11601 5 PGFGGQ--KFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINC----PDRIQ---AISTLK 74 (82)
Q Consensus 5 pG~~gq--~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~----~d~~~---~~~~l~ 74 (82)
+|+.|+ .+.+..++.++++++.. ++||+++|||+ ++|+.++.++|||++++||+|++. .++.+ .++++.
T Consensus 176 ~G~tG~~~~~~~~~~~~i~~v~~~~-~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~~~~~~~~~~~~~~~~~~ 254 (262)
T 1rd5_A 176 NGVTGPRANVNPRVESLIQEVKKVT-NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYA 254 (262)
T ss_dssp SCCBCTTSCBCTHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCcCCCchHHHHHHHHHhhc-CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhHHHhccChhHHHHHHHHHH
Confidence 888888 77788889999999876 69999999999 999999999999999999999973 24444 445555
Q ss_pred HHHHH
Q psy11601 75 SSVQK 79 (82)
Q Consensus 75 ~~~~~ 79 (82)
+.+++
T Consensus 255 ~~l~~ 259 (262)
T 1rd5_A 255 RGMKN 259 (262)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 25
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.32 E-value=4.1e-12 Score=83.16 Aligned_cols=66 Identities=17% Similarity=0.202 Sum_probs=58.4
Q ss_pred chHHHHHHHHHhCC-CCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCC----CCHHHHHHHHHHHHHHh
Q psy11601 15 DMMPKVKWLRENYP-TLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC----PDRIQAISTLKSSVQKY 80 (82)
Q Consensus 15 ~~~~ki~~~~~~~~-~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~----~d~~~~~~~l~~~~~~~ 80 (82)
..+++++++++..+ ++|++++|||+.+|+.++.++||+++++||++|.+ +||.+.+++|++.+++.
T Consensus 133 ~g~~~~~~l~~~~~~~ipvia~GGI~~~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~~~~~~ 203 (212)
T 2v82_A 133 FGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREA 203 (212)
T ss_dssp HCHHHHHHHHTTSCTTCEEEEESSCCTTTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhccCCCeEEEeCCCCHHHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35788888888765 59999999999999999999999999999999987 68999999998887653
No 26
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.25 E-value=1.6e-11 Score=83.56 Aligned_cols=60 Identities=20% Similarity=0.300 Sum_probs=52.2
Q ss_pred ccCCCCCCC--CCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCC
Q psy11601 2 TVEPGFGGQ--KFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 2 ~v~pG~~gq--~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
++. |+.|| ++.+...++++++++.. ++|+.++|||+ ++++.++..+|||++|+||+|++.
T Consensus 178 s~~-G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~~ 240 (268)
T 1qop_A 178 SRS-GVTGAENRGALPLHHLIEKLKEYH-AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKI 240 (268)
T ss_dssp SSS-SCCCSSSCC--CCHHHHHHHHHTT-CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred ecC-CcCCCccCCCchHHHHHHHHHhcc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhh
Confidence 455 99998 78888899999999976 68999999998 999999889999999999999863
No 27
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.25 E-value=1.8e-11 Score=79.64 Aligned_cols=63 Identities=19% Similarity=0.256 Sum_probs=55.0
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCC---HHHHHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPD---RIQAISTLKSSVQK 79 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d---~~~~~~~l~~~~~~ 79 (82)
.++.++++++..+++|++++|||+.+|+.++.++|||++++||++|. +| +.+.++++.+.+++
T Consensus 137 g~~~~~~l~~~~~~~pvia~GGI~~~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~~~~ 202 (205)
T 1wa3_A 137 GPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEKIRG 202 (205)
T ss_dssp HHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCcEEEcCCCCHHHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHHHHh
Confidence 45666777766667999999999999999999999999999999999 89 88888888887764
No 28
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.21 E-value=2.8e-11 Score=79.48 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=58.4
Q ss_pred ccCCCCCCCCCC----cchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 2 TVEPGFGGQKFM----QDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 2 ~v~pG~~gq~~~----~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++|+.++.+. ...++.++++++.. ++|+.++||| +.+++.++.++|||++++|++||. +....++|++.
T Consensus 145 ~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~---p~~~~~~~~~~ 220 (223)
T 1y0e_A 145 TTLHGYTSYTQGQLLYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR---PKEITKRFVQV 220 (223)
T ss_dssp CTTTTSSTTSTTCCTTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHHHT
T ss_pred eCCCcCcCCCCCCCCCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC---cHHHHHHHHHH
Confidence 346788877663 34566788887765 6999999999 999999999999999999999996 66777777665
Q ss_pred H
Q psy11601 77 V 77 (82)
Q Consensus 77 ~ 77 (82)
+
T Consensus 221 ~ 221 (223)
T 1y0e_A 221 M 221 (223)
T ss_dssp T
T ss_pred h
Confidence 4
No 29
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.16 E-value=9.2e-11 Score=86.89 Aligned_cols=66 Identities=14% Similarity=0.102 Sum_probs=56.0
Q ss_pred cchHHHHHHHHHh-----CCCCcEEEEcCCCcccHHHHHH--------cCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 14 QDMMPKVKWLREN-----YPTLNIEVDGGVGPNTIDECAK--------AGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 14 ~~~~~ki~~~~~~-----~~~~~i~~dGGI~~~ni~~~~~--------~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
+-.++.++++++. ..++|++++|||+++|+.++.+ +|+|+++++|+||+++||.+++++|++.+++
T Consensus 153 ~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 153 PMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDK 231 (540)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHHHHHHHHHHHh
Confidence 3445666665543 1469999999999999999998 8999999999999999999999999998875
No 30
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.16 E-value=6.8e-11 Score=78.13 Aligned_cols=61 Identities=13% Similarity=0.196 Sum_probs=52.1
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCC---HHHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPD---RIQAISTLKSSV 77 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d---~~~~~~~l~~~~ 77 (82)
.++.|++++...+++|++++|||+.+|+.+++++|++++++||+|+. +| +.+.++++.+.+
T Consensus 138 G~~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aGa~~vavgSai~~-~d~~~i~~~a~~~~~~~ 201 (207)
T 2yw3_A 138 GVRVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALPNLLAVGGSWLLQ-GNLEAVRAKVRAAKALL 201 (207)
T ss_dssp HHHHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCSSBSCEEESGGGS-SCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCCCcEEEEehhhhC-CCHHHHHHHHHHHHHHh
Confidence 45778888888778999999999999999999999999999999998 77 556666665543
No 31
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.16 E-value=9.2e-11 Score=77.70 Aligned_cols=70 Identities=13% Similarity=0.171 Sum_probs=57.2
Q ss_pred ccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 2 TVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 2 ~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
.++|++ +.+.+..++.++++++. ++|+.++|||+ ++++.++.++|||++++||++|. |...+++|++.++
T Consensus 163 g~~~~~--~~~~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~---p~~~~~~l~~~~~ 233 (234)
T 1yxy_A 163 GYTPYS--RQEAGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR---PKEIAERFIEALK 233 (234)
T ss_dssp TSSTTS--CCSSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC---HHHHHHHHHHHTC
T ss_pred ccCCCC--cCCCCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC---hHHHHHHHHHHHh
Confidence 344544 44556678888888876 69999999999 99999999999999999999997 7788888876653
No 32
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.15 E-value=6.1e-11 Score=81.32 Aligned_cols=66 Identities=18% Similarity=0.367 Sum_probs=57.7
Q ss_pred cchHHHHHHHHHhCCCCcEE--EEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 14 QDMMPKVKWLRENYPTLNIE--VDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~--~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
+..+++++++++.. ++|+. ++||| +.+++..+.++|||++++||++|+++||.+.+++|++.+++.
T Consensus 193 ~~~~~~i~~l~~~~-~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~i~~~ 261 (297)
T 2zbt_A 193 GAPFELVKWVHDHG-RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAHY 261 (297)
T ss_dssp TCCHHHHHHHHHHS-SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHhc-CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHHHHHH
Confidence 44678888888864 56766 99999 999999999999999999999999999999999999887654
No 33
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=99.11 E-value=2.9e-11 Score=81.05 Aligned_cols=79 Identities=19% Similarity=0.151 Sum_probs=56.1
Q ss_pred CccCCCCCCCCCCcchHHHHHHHHHhCCC-CcEEEEcCCCcc--cHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 1 MTVEPGFGGQKFMQDMMPKVKWLRENYPT-LNIEVDGGVGPN--TIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 1 m~v~pG~~gq~~~~~~~~ki~~~~~~~~~-~~i~~dGGI~~~--ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
|++++|+.|.-......+.++++|+..++ +++ +++||+++ +. +..++|+|.+|+|++||+++||.++++++++.+
T Consensus 145 ~a~~~G~~GvV~~at~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~~~~ 222 (228)
T 3m47_A 145 MGVDLGVKNYVGPSTRPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAIESI 222 (228)
T ss_dssp HHHHTTCCEEECCSSCHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTSSCHHHHHHHHHHHC
T ss_pred HHHHhCCcEEEECCCChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHHHHH
Confidence 45678888866665556677777776544 666 89999987 77 888999999999999999999999999999988
Q ss_pred HHhh
Q psy11601 78 QKYL 81 (82)
Q Consensus 78 ~~~~ 81 (82)
++.+
T Consensus 223 ~~~~ 226 (228)
T 3m47_A 223 KDLL 226 (228)
T ss_dssp ----
T ss_pred HHHh
Confidence 7654
No 34
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.03 E-value=1.5e-10 Score=76.11 Aligned_cols=53 Identities=13% Similarity=0.027 Sum_probs=45.8
Q ss_pred chHHHHHHHHHhC-CCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHH
Q psy11601 15 DMMPKVKWLRENY-PTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRI 67 (82)
Q Consensus 15 ~~~~ki~~~~~~~-~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~ 67 (82)
-.++.++++++.. .++|+++.|||+++|+.++.++|++++.++|+|++++|+.
T Consensus 129 ~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~Ga~gVav~s~i~~~~d~~ 182 (210)
T 3ceu_A 129 YTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFGFGGAVVLGDLWNKFDAC 182 (210)
T ss_dssp CCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTTCSEEEESHHHHTTCCTT
T ss_pred CCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhCCCEEEEhHHhHcCCCHH
Confidence 3556677777753 4789999999999999999999999999999999988875
No 35
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.03 E-value=1.1e-09 Score=74.47 Aligned_cols=62 Identities=23% Similarity=0.372 Sum_probs=54.7
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
.+.++++++.. ++|+++.|||+ ++++.++.++|||++++||+|++.+|+.+.+++|.+.+++
T Consensus 167 ~~~l~~i~~~~-~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~~~v~~ 229 (264)
T 1xm3_A 167 PLNLSFIIEQA-KVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVEA 229 (264)
T ss_dssp HHHHHHHHHHC-SSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHHHHHH
Confidence 55677777754 79999999996 8999999999999999999999999999999999887764
No 36
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=99.00 E-value=1.2e-09 Score=72.87 Aligned_cols=64 Identities=17% Similarity=0.380 Sum_probs=55.8
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCCcc--cHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHhh
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVGPN--TIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~~~--ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~~ 81 (82)
-+.++++|+..++ .+.+++||+++ +..+..++|+|.+|+|++||+++||.++++++++.+++.+
T Consensus 139 ~~e~~~ir~~~~~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~~~~ 204 (215)
T 3ve9_A 139 PSMISRVKGDFPD-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQEEVL 204 (215)
T ss_dssp HHHHHHHHHHCTT-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCC-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 3456667776666 68899999999 9999999999999999999999999999999999888754
No 37
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.95 E-value=2.3e-09 Score=73.01 Aligned_cols=65 Identities=18% Similarity=0.191 Sum_probs=55.6
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcc-------cHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPN-------TIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~-------ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
.++.++++++..+.+|+.+.|||+.+ ++..+.++||+++++|++||+++||.+.+++|++.+++.
T Consensus 183 ~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp~~~~~~l~~~v~~~ 254 (263)
T 1w8s_A 183 DPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFARALAELVYGG 254 (263)
T ss_dssp SHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTTHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcCHHHHHHHHHHHHhcC
Confidence 56778887776644599999999987 888888999999999999999999999999999988654
No 38
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=98.92 E-value=3.9e-09 Score=70.63 Aligned_cols=48 Identities=13% Similarity=0.224 Sum_probs=43.2
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHH-cCCCEEEEeccccCCC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAK-AGANWIVSGTAVINCP 64 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~-~Gad~vv~gs~i~~~~ 64 (82)
..+.|++++...|++|++++|||+++|+.+|++ .|+++++ ||+|++++
T Consensus 153 G~~~lk~i~~~~~~ipvvaiGGI~~~N~~~~l~~~Ga~~v~-gSai~~~~ 201 (225)
T 1mxs_A 153 GVAAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCVG-TTWMLDSS 201 (225)
T ss_dssp HHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHHSTTBCCEE-ECTTSCHH
T ss_pred CHHHHHHHHhhCCCCeEEEECCCCHHHHHHHHhccCCEEEE-EchhcCch
Confidence 367788888888889999999999999999999 7999999 99999843
No 39
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.90 E-value=2.5e-09 Score=74.30 Aligned_cols=65 Identities=15% Similarity=0.330 Sum_probs=55.6
Q ss_pred chHHHHHHHHHhCCCCcEE--EEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 15 DMMPKVKWLRENYPTLNIE--VDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~--~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
..++.++++++.. ++|+. ++||| +++++..+.++|||++++||+||+++||.+.+++|++.++++
T Consensus 194 ~~~~ll~~i~~~~-~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~~ 261 (297)
T 4adt_A 194 APIDLILLTRKLK-RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSNF 261 (297)
T ss_dssp CCHHHHHHHHHHT-SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhc-CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHhh
Confidence 3466677777764 35554 99999 999999999999999999999999999999999999888754
No 40
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=98.88 E-value=1.7e-09 Score=71.81 Aligned_cols=49 Identities=10% Similarity=0.200 Sum_probs=43.9
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHc-CCCEEEEeccccCCCC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKA-GANWIVSGTAVINCPD 65 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~-Gad~vv~gs~i~~~~d 65 (82)
..+.|+++++..|++|++++|||+++|+.++.++ |+++++ ||+|+.+++
T Consensus 143 G~~~lk~i~~~~~~ipvvaiGGI~~~n~~~~l~agg~~~v~-gS~i~~~~~ 192 (214)
T 1wbh_A 143 GVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIG-GSWLVPADA 192 (214)
T ss_dssp HHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBSCEE-EGGGSCHHH
T ss_pred CHHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcCCCeEEE-eccccChhh
Confidence 3678899998888899999999999999999999 999999 999997543
No 41
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.88 E-value=7.7e-09 Score=69.16 Aligned_cols=59 Identities=17% Similarity=0.162 Sum_probs=48.0
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHc-CCCEEEEeccccCC-----CCHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKA-GANWIVSGTAVINC-----PDRIQAISTLKS 75 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~-Gad~vv~gs~i~~~-----~d~~~~~~~l~~ 75 (82)
.++.|+++++..|++|++++|||+++|+.+++++ |+++++ ||+|+.+ .|+.+..+..++
T Consensus 144 G~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~-gS~i~~~~~i~~~~~~~i~~~a~~ 208 (224)
T 1vhc_A 144 GVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACG-GSWFVEKKLIQSNNWDEIGRLVRE 208 (224)
T ss_dssp HHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEE-ECGGGCHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEE-EchhcCcchhccCCHHHHHHHHHH
Confidence 3788899998887899999999999999999999 999999 9999974 455444333333
No 42
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.87 E-value=7.4e-09 Score=68.89 Aligned_cols=69 Identities=20% Similarity=0.202 Sum_probs=54.4
Q ss_pred cCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCCC-CHHHHHHHHHH
Q psy11601 3 VEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINCP-DRIQAISTLKS 75 (82)
Q Consensus 3 v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~~-d~~~~~~~l~~ 75 (82)
++++...+.+ .++.++++++.. ++|+.+.|||+. +++.++.++|+|++++||+++..+ ++.+..+.+++
T Consensus 173 ~~~~g~~~g~---~~~~~~~l~~~~-~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~~~~~~~~~l~~ 243 (253)
T 1thf_D 173 IDRDGTKSGY---DTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKK 243 (253)
T ss_dssp TTTTTSCSCC---CHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTCSCHHHHHHHHHH
T ss_pred ccCCCCCCCC---CHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4555555554 356666666654 699999999995 999999999999999999999876 88887777653
No 43
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.87 E-value=1e-08 Score=67.37 Aligned_cols=69 Identities=17% Similarity=0.245 Sum_probs=52.4
Q ss_pred ccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCCC-CHHHHHHHHH
Q psy11601 2 TVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINCP-DRIQAISTLK 74 (82)
Q Consensus 2 ~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~~-d~~~~~~~l~ 74 (82)
+++|++.++.+ .++.++++++.. ++|+.+.|||+. +++.++.++|||++++||+++..+ ++.+..+.++
T Consensus 175 ~~~~~g~~~~~---~~~~i~~l~~~~-~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l~ 245 (253)
T 1h5y_A 175 SIDRDGTGLGY---DVELIRRVADSV-RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYLK 245 (253)
T ss_dssp ETTTTTTCSCC---CHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHH
T ss_pred cccCCCCcCcC---CHHHHHHHHHhc-CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHHH
Confidence 35566556655 456667777665 689999999994 999999999999999999999865 5554444443
No 44
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.86 E-value=8.5e-09 Score=70.65 Aligned_cols=61 Identities=21% Similarity=0.217 Sum_probs=46.6
Q ss_pred CccCCCCCCCC-CCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 1 MTVEPGFGGQK-FMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 1 m~v~pG~~gq~-~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
|++.+.++.+. +.++..+.++++++.. +.|+.+.|||+ ++++.....+|||++|+||+|++
T Consensus 178 vS~~GvTG~~~~~~~~~~~~v~~vr~~~-~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 178 LSRAGVTGTESKAGEPIENILTQLAEFN-APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVVK 240 (267)
T ss_dssp SCCCCCC--------CHHHHHHHHHTTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred EecCCCCCCccCCcHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 35555555554 6777888899999875 68999999995 99999888999999999999986
No 45
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.85 E-value=5.2e-09 Score=72.38 Aligned_cols=65 Identities=14% Similarity=0.260 Sum_probs=56.8
Q ss_pred chHHHHHHHHHhCCCCcEEE--EcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 15 DMMPKVKWLRENYPTLNIEV--DGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~--dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
..++.|+++++. .++|+.+ -||| +++++..+.++|+|++++||++|+++||....++|.+.++.+
T Consensus 185 ad~elI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~Av~~~ 252 (291)
T 3o07_A 185 VPVSLLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEATTHF 252 (291)
T ss_dssp SCHHHHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHHHHhc
Confidence 357778888877 3688865 5999 899999999999999999999999999999999999988754
No 46
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.85 E-value=5.6e-09 Score=71.60 Aligned_cols=66 Identities=17% Similarity=0.207 Sum_probs=56.4
Q ss_pred CCCCcchHHHHHHHHHhCC-CCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 10 QKFMQDMMPKVKWLRENYP-TLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 10 q~~~~~~~~ki~~~~~~~~-~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
..|.+ .++.++++.+..+ ++|+++.|||+ ++++..+.++|+|+|++|++|++++||.+.+++|.+.
T Consensus 194 ~~~~~-dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~~ 261 (272)
T 3qja_A 194 MTLDV-DRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTA 261 (272)
T ss_dssp TTCCB-CTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHTT
T ss_pred ccccc-CHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHhh
Confidence 34443 4677778777655 68999999998 9999999999999999999999999999999998764
No 47
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=98.85 E-value=2.3e-09 Score=71.26 Aligned_cols=67 Identities=13% Similarity=0.211 Sum_probs=49.3
Q ss_pred CCCCcchHHHHHH-HHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 10 QKFMQDMMPKVKW-LRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 10 q~~~~~~~~ki~~-~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.+.++.++...+ +++...++|+.+.|||+. +.+..+.+.|+|++++||++++++|+.+.+++|++.
T Consensus 150 ~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~~~ 218 (219)
T 2h6r_A 150 SKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKAKNVEEAIRELIKF 218 (219)
T ss_dssp ------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHHCC-
T ss_pred ccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHHHHh
Confidence 6777775666555 455544689999999995 666778999999999999999999999998887653
No 48
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.84 E-value=1.1e-08 Score=69.01 Aligned_cols=65 Identities=18% Similarity=0.250 Sum_probs=57.4
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCccc-------HHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPNT-------IDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~n-------i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
..++.++++++.. ++|+.+.|||+.+| +.++.++|++++.+|++|++++||.+.++++++.+++.
T Consensus 189 ~~~~~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l~~~~~~~ 260 (273)
T 2qjg_A 189 GDIDSFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAVCKIVHEN 260 (273)
T ss_dssp SSHHHHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHHHHHHHhcC
Confidence 4577888888765 68999999999887 88888999999999999999999999999999887653
No 49
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.84 E-value=4.4e-09 Score=74.04 Aligned_cols=64 Identities=13% Similarity=0.258 Sum_probs=55.2
Q ss_pred hHHHHHHHHHhCCCCcE--EEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 16 MMPKVKWLRENYPTLNI--EVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i--~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
.++-++++++.. ++|+ .+.||| +++|+..+.++|+|+|.+||+||+++||.+.+++|.+.++.+
T Consensus 228 ~lell~~i~~~~-~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~~ 294 (330)
T 2yzr_A 228 LYEVLLEVKKLG-RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNY 294 (330)
T ss_dssp HHHHHHHHHHHT-SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhC-CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHhc
Confidence 346677777754 4676 699999 699999999999999999999999999999999999887653
No 50
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=98.83 E-value=1.1e-08 Score=71.42 Aligned_cols=60 Identities=12% Similarity=0.249 Sum_probs=50.2
Q ss_pred HHHHHHhCCCCcEEEEcCCCcc-----------cHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 20 VKWLRENYPTLNIEVDGGVGPN-----------TIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dGGI~~~-----------ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
++++|+..++-.+.+.+||+++ |+.++.++|||.+|+||+||+++||.++++++++.+++
T Consensus 182 ~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~~i~~ 252 (303)
T 3ru6_A 182 SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIHR 252 (303)
T ss_dssp HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHC-
T ss_pred HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHh
Confidence 3455555544458899999987 89999999999999999999999999999999987754
No 51
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.82 E-value=6.4e-09 Score=71.72 Aligned_cols=66 Identities=12% Similarity=0.240 Sum_probs=56.5
Q ss_pred cchHHHHHHHHHhCCCCcEE--EEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 14 QDMMPKVKWLRENYPTLNIE--VDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~--~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
+..++.++++++.. ++|+. +.||| +.+++.++.++|||++++||++|..+||...+++|.+.+.++
T Consensus 193 ~~~~~~i~~i~~~~-~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~~~ 261 (305)
T 2nv1_A 193 GAPYELLLQIKKDG-KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHF 261 (305)
T ss_dssp TCCHHHHHHHHHHT-SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHhc-CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHHHh
Confidence 34566777777754 57877 99999 999999999999999999999999999999999999887654
No 52
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=98.82 E-value=7.8e-09 Score=70.68 Aligned_cols=66 Identities=18% Similarity=0.094 Sum_probs=52.6
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEcCCCcc-----------cHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHhh
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDGGVGPN-----------TIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dGGI~~~-----------ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~~ 81 (82)
.|..++.||+.. ++--+.+..||++. |..++.++|+|.+|+||+||+++||.++++++++.+++++
T Consensus 164 s~~e~~~ir~~~---~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~~~~ 240 (259)
T 3tfx_A 164 SPLEVKKLHENI---GDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFNAEN 240 (259)
T ss_dssp CGGGHHHHHHHH---CSSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHTCTT
T ss_pred CHHHHHHHHhhc---CCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHHHH
Confidence 444444454432 22336789999987 5889999999999999999999999999999999887664
No 53
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.80 E-value=8.1e-09 Score=68.56 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=46.7
Q ss_pred ccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHc---CCCEEEEeccccCCC-CHHHHHHH
Q psy11601 2 TVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKA---GANWIVSGTAVINCP-DRIQAIST 72 (82)
Q Consensus 2 ~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~---Gad~vv~gs~i~~~~-d~~~~~~~ 72 (82)
+++|++.+|.+. ++.++++++.. ++|+.++|||+. +++.++.++ |||++++||+++..+ ++.+..+.
T Consensus 167 ~~~~~~~~~g~~---~~~~~~i~~~~-~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~ 238 (244)
T 1vzw_A 167 DIAKDGTLQGPN---LELLKNVCAAT-DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEA 238 (244)
T ss_dssp EC-------CCC---HHHHHHHHHTC-SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHH
T ss_pred ccCcccccCCCC---HHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHH
Confidence 456776666654 55555555654 689999999996 999999999 999999999999866 55554443
No 54
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=98.76 E-value=2.6e-08 Score=66.54 Aligned_cols=63 Identities=17% Similarity=0.392 Sum_probs=54.7
Q ss_pred HHHHHHHHhCCCCcEEEEcCCCcc--cHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHhh
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVGPN--TIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~~~--ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~~ 81 (82)
+.++++|+..++ .+.+.+||+++ +..+..++|+|.+|+|++|++++||.++++++++.+++.+
T Consensus 147 ~e~~~ir~~~~~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~~~~ 211 (222)
T 4dbe_A 147 DHITQYRRDFEK-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIEDKV 211 (222)
T ss_dssp HHHHHHHHHCTT-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 456667776666 57899999998 7889999999999999999999999999999999887754
No 55
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=98.65 E-value=2.5e-08 Score=66.11 Aligned_cols=57 Identities=25% Similarity=0.278 Sum_probs=45.2
Q ss_pred HHHHHHHHhCCCCcEEEEcCCCccc----------HHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVGPNT----------IDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~~~n----------i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
++++++++..+. + .+++||++++ ..+ .++|+|.+|+|+.||+++||.++++++++.+
T Consensus 146 ~~~~~ir~~~~~-~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~dP~~aa~~i~~~i 212 (213)
T 1vqt_A 146 PWAKALREKIKG-K-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLGREIYLSENPREKIKRIKEMR 212 (213)
T ss_dssp HHHHHHTTTCCS-C-EEECCBC---------CCBCHHH-HTTTCSEEEESHHHHTSSCHHHHHHHHTC--
T ss_pred HHHHHHHHHCCC-C-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEChhhcCCCCHHHHHHHHHHHh
Confidence 567777776544 5 9999999987 578 9999999999999999999999999988754
No 56
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.65 E-value=3.8e-08 Score=65.10 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=49.6
Q ss_pred ccCCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHc---CCCEEEEeccccCCC-CHHHHH
Q psy11601 2 TVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKA---GANWIVSGTAVINCP-DRIQAI 70 (82)
Q Consensus 2 ~v~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~---Gad~vv~gs~i~~~~-d~~~~~ 70 (82)
++++++.++.+ .++.++++++.. ++|+.++|||+. +++.++.++ |||++++||+++..+ ++.+..
T Consensus 170 ~~~~~~~~~g~---~~~~~~~l~~~~-~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~~~~~~~ 239 (244)
T 2y88_A 170 DITKDGTLGGP---NLDLLAGVADRT-DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQAL 239 (244)
T ss_dssp ETTTTTTTSCC---CHHHHHHHHTTC-SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHH
T ss_pred ecCCccccCCC---CHHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCCcCHHHHH
Confidence 45666665555 455666666654 799999999996 999999998 999999999999865 444433
No 57
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.64 E-value=1.7e-07 Score=62.72 Aligned_cols=63 Identities=19% Similarity=0.239 Sum_probs=53.6
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHhh
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~~ 81 (82)
...++.++++++. ++|+.+.||| +++++..+.++|||++++|++|++ |....++|.+.+++.-
T Consensus 168 ~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~---p~~~~~~~~~~i~~~~ 231 (232)
T 3igs_A 168 EPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITR---LEHICGWYNDALKKAA 231 (232)
T ss_dssp SCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcC---HHHHHHHHHHHHHHhc
Confidence 3467888888876 6999999999 599999999999999999999995 6777888888877653
No 58
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.62 E-value=4.3e-08 Score=67.20 Aligned_cols=53 Identities=19% Similarity=0.306 Sum_probs=43.2
Q ss_pred CCcchHHHHHH-HHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCC
Q psy11601 12 FMQDMMPKVKW-LRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 12 ~~~~~~~ki~~-~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
|.++.++++.+ ++...|++++++.|||+++|+.++.++|+|.+++||.++.++
T Consensus 211 ~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aGaD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 211 LSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIHQAT 264 (273)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTTCSEEECTHHHHTCC
T ss_pred CCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcCCcEEEEcHHhcCCC
Confidence 45666666554 344457899999999999999999999999999999988643
No 59
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=98.62 E-value=7.5e-08 Score=66.87 Aligned_cols=52 Identities=23% Similarity=0.373 Sum_probs=47.1
Q ss_pred CCc-EEEEcCCCc----ccHHHHHHcCCCEEEEeccccCC----CCHHHHH--------HHHHHHHHHh
Q psy11601 29 TLN-IEVDGGVGP----NTIDECAKAGANWIVSGTAVINC----PDRIQAI--------STLKSSVQKY 80 (82)
Q Consensus 29 ~~~-i~~dGGI~~----~ni~~~~~~Gad~vv~gs~i~~~----~d~~~~~--------~~l~~~~~~~ 80 (82)
+.| |++.||++. +++..+.++|+++|++|++||++ +||.+.+ ++|++.+.+.
T Consensus 221 ~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~ 289 (304)
T 1to3_A 221 NMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEM 289 (304)
T ss_dssp CSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcC
Confidence 579 999999998 45999999999999999999999 9999999 9999888654
No 60
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.61 E-value=1.5e-07 Score=63.38 Aligned_cols=47 Identities=23% Similarity=0.342 Sum_probs=43.4
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
..+.|+.++...|++|+++.|||+++|+.+++++|+..++.||.++.
T Consensus 161 G~~~lkal~~p~p~ip~~ptGGI~~~n~~~~l~aGa~~~vgGs~l~~ 207 (232)
T 4e38_A 161 GISMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIPQVLACGGTWMVD 207 (232)
T ss_dssp HHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBCCEEECGGGC
T ss_pred CHHHHHHHHHHhcCCCeeeEcCCCHHHHHHHHHCCCeEEEECchhcC
Confidence 46888999988788999999999999999999999999999999985
No 61
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.58 E-value=9e-08 Score=64.93 Aligned_cols=74 Identities=22% Similarity=0.280 Sum_probs=52.9
Q ss_pred CCCCCCC--CC-cchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCC--CCHHHHHHHHHHHHH
Q psy11601 5 PGFGGQK--FM-QDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINC--PDRIQAISTLKSSVQ 78 (82)
Q Consensus 5 pG~~gq~--~~-~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~--~d~~~~~~~l~~~~~ 78 (82)
+|..|.. +. +...+.++++++.. ++|+.+.|||+ ++++.. +..|||++++||+|.+. ++..+.++++.+.++
T Consensus 180 ~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~~~~~~~~~~~~~~~~~~ 257 (262)
T 2ekc_A 180 TGTTGAREKLPYERIKKKVEEYRELC-DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKLAGQKKIEDLGNLVKELK 257 (262)
T ss_dssp CC---------CHHHHHHHHHHHHHC-CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCccCCCCCcCcccHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhhhhhhhHHHHHHHHHHHH
Confidence 3444544 23 44567888899886 78999999998 999999 57799999999999874 445566777776665
Q ss_pred Hh
Q psy11601 79 KY 80 (82)
Q Consensus 79 ~~ 80 (82)
+.
T Consensus 258 ~~ 259 (262)
T 2ekc_A 258 EG 259 (262)
T ss_dssp HT
T ss_pred HH
Confidence 53
No 62
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.58 E-value=2.9e-07 Score=61.07 Aligned_cols=58 Identities=16% Similarity=0.119 Sum_probs=50.1
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCC-CHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCP-DRIQAISTLK 74 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~-d~~~~~~~l~ 74 (82)
.++.++++++.. ++|+.+.|||+ ++++.++.++|+|++++||+++..+ ++.+..+.+.
T Consensus 184 ~~~~i~~l~~~~-~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~ 243 (252)
T 1ka9_F 184 DLRLTRMVAEAV-GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYLA 243 (252)
T ss_dssp CHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 488888888875 69999999999 5999999999999999999999876 7777766554
No 63
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=98.57 E-value=1.1e-07 Score=65.63 Aligned_cols=53 Identities=19% Similarity=0.269 Sum_probs=43.4
Q ss_pred CCcchHHHHHH-HHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCC
Q psy11601 12 FMQDMMPKVKW-LRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 12 ~~~~~~~ki~~-~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
|.|+.+.++.+ ++...+++++++.|||+++|+++|.++|+|.|++|+.+..++
T Consensus 223 ~~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 223 FAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGALTHSVR 276 (284)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTTCSEEECGGGTSSBC
T ss_pred CCHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcCCCEEEECHHHcCCC
Confidence 56666666444 555556799999999999999999999999999999887644
No 64
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=98.57 E-value=4.1e-08 Score=67.92 Aligned_cols=53 Identities=13% Similarity=0.255 Sum_probs=43.6
Q ss_pred CCcchHHHHHH-HHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCC
Q psy11601 12 FMQDMMPKVKW-LRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 12 ~~~~~~~ki~~-~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
|.++.++++.+ ++...+++++++.|||+++|+++|.++|+|++++|+.++.++
T Consensus 222 ~~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tGVD~IsvGslt~sa~ 275 (285)
T 1o4u_A 222 LSPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISSSRLTLQEV 275 (285)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTTCCEEEEGGGTSSCC
T ss_pred CCHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 56666666554 444456799999999999999999999999999999988754
No 65
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.55 E-value=3.7e-08 Score=66.86 Aligned_cols=57 Identities=14% Similarity=0.151 Sum_probs=48.2
Q ss_pred HHHHHHHHHhCC----CCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHH
Q psy11601 17 MPKVKWLRENYP----TLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPDRIQAISTLK 74 (82)
Q Consensus 17 ~~ki~~~~~~~~----~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~ 74 (82)
++..+++.+..| ++++++.|||+ ++++..+.+ |+|+|++|++|+.++||.+++++|.
T Consensus 192 l~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l~ 253 (254)
T 1vc4_A 192 LETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRAPDLEAALRELV 253 (254)
T ss_dssp TTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTSSCHHHHHHHHH
T ss_pred HHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHHh
Confidence 455555554432 58999999998 999999999 9999999999999999999998874
No 66
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.54 E-value=2.1e-07 Score=63.91 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=53.4
Q ss_pred hHHHHHHHHHhCC-CCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYP-TLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 16 ~~~ki~~~~~~~~-~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
.++...++.+..| ++++++.||| +++++..+.++|+|+|++|++|+.++||.+++++|..
T Consensus 206 dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~~ 267 (272)
T 3tsm_A 206 NLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAAATRALLT 267 (272)
T ss_dssp CTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHHh
Confidence 3677777776654 5899999999 9999999999999999999999999999999998875
No 67
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=98.53 E-value=2.2e-07 Score=62.70 Aligned_cols=57 Identities=19% Similarity=0.423 Sum_probs=43.6
Q ss_pred HHHhCCCCcEEEEcCCCcc-----------cHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 23 LRENYPTLNIEVDGGVGPN-----------TIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 23 ~~~~~~~~~i~~dGGI~~~-----------ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
+|+..++-.+.+..||+++ |..++.++|+|.+|+||+||+++||.++++++++.+++
T Consensus 171 ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~a~~~i~~~i~~ 238 (239)
T 3tr2_A 171 LRKQFDRNFLLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLKALEAIDKDIKT 238 (239)
T ss_dssp HHTTCCTTSEEEECCBC----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHC--
T ss_pred HHHhcCCCcEEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHhh
Confidence 4444333236788999876 47789999999999999999999999999999987654
No 68
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=98.52 E-value=8.4e-08 Score=66.60 Aligned_cols=53 Identities=17% Similarity=0.389 Sum_probs=42.8
Q ss_pred CCcchHHHHHH-HHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCC
Q psy11601 12 FMQDMMPKVKW-LRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 12 ~~~~~~~ki~~-~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
|.++.++++.+ ++...|+++|++.|||+++|+.++.++|+|.+++||.+++++
T Consensus 226 ~~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i~vGs~i~~a~ 279 (299)
T 2jbm_A 226 FKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAP 279 (299)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEEECTHHHHSCC
T ss_pred CCHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEEEEChhhcCCC
Confidence 44556665554 333467799999999999999999999999999999888754
No 69
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.48 E-value=1.4e-07 Score=63.07 Aligned_cols=47 Identities=13% Similarity=0.188 Sum_probs=42.3
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCC
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
.+.|+.++...|++++++.|||+++|+.+|+++|+..++.||.++..
T Consensus 147 ~~~lkal~~p~p~i~~~ptGGI~~~N~~~~l~aGa~~~vgGs~l~~~ 193 (217)
T 3lab_A 147 AKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLPNVICAGGSWLTES 193 (217)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHSTTBCCEEESGGGCH
T ss_pred HHHHHHHHhhhcCceEEEeCCCCHHHHHHHHHCCCEEEEEChhhcCh
Confidence 57788888888899999999999999999999999988888888853
No 70
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.48 E-value=5.4e-07 Score=60.25 Aligned_cols=59 Identities=15% Similarity=0.165 Sum_probs=49.1
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
..++.++++++. ++|+.+.||| +++++..+.++|||++++|++|++ |....++|.+.++
T Consensus 169 ~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~---p~~~~~~f~~~~~ 228 (229)
T 3q58_A 169 PDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR---IEHICQWFSHAVK 228 (229)
T ss_dssp CCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC---hHHHHHHHHHHHh
Confidence 367888888775 6999999999 699999999999999999999995 5556666666553
No 71
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.46 E-value=9.1e-07 Score=60.62 Aligned_cols=61 Identities=18% Similarity=0.314 Sum_probs=53.4
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
.+-|+++++. .++|+.++|||.- +.+....+.|+|++++||+|++++||....++|.+.++
T Consensus 176 ~~lI~~I~e~-~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~ 237 (265)
T 1wv2_A 176 PYNLRIILEE-AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIV 237 (265)
T ss_dssp HHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 5556777775 4799999999964 99999999999999999999999999999999998765
No 72
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=98.44 E-value=3.9e-07 Score=62.11 Aligned_cols=68 Identities=16% Similarity=0.327 Sum_probs=50.0
Q ss_pred CCCCCCCCcchHHHHHHHHHhC-CCCcEEEEcCCCcc-----------cHHHHHHcCCCEEEEeccccCCCCHHHHHHHH
Q psy11601 6 GFGGQKFMQDMMPKVKWLRENY-PTLNIEVDGGVGPN-----------TIDECAKAGANWIVSGTAVINCPDRIQAISTL 73 (82)
Q Consensus 6 G~~gq~~~~~~~~ki~~~~~~~-~~~~i~~dGGI~~~-----------ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l 73 (82)
|..|--..+..+++| |+.. +++ +.+..||+++ |..++.++|+|.+|+|++||+++||.++++++
T Consensus 175 G~~GvV~sa~e~~~i---R~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i 250 (255)
T 3ldv_A 175 GLDGVVCSAQEASLL---KQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEI 250 (255)
T ss_dssp TCSEEECCHHHHHHH---HHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSCHHHHHHHH
T ss_pred CCCEEEECHHHHHHH---HHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCCHHHHHHHH
Confidence 444444444444444 4433 334 6688999876 47789999999999999999999999999999
Q ss_pred HHHH
Q psy11601 74 KSSV 77 (82)
Q Consensus 74 ~~~~ 77 (82)
++.+
T Consensus 251 ~~ei 254 (255)
T 3ldv_A 251 NSSL 254 (255)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 8754
No 73
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.44 E-value=6.3e-07 Score=61.47 Aligned_cols=58 Identities=21% Similarity=0.296 Sum_probs=43.9
Q ss_pred CCCCCCCC--CCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccC
Q psy11601 4 EPGFGGQK--FMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 4 ~pG~~gq~--~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
..|+.|.. +.+...+.++++++.. +.|+.+-+|| +++++.+....|||++|+||+|.+
T Consensus 182 ~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 182 RAGVTGAETKANMPVHALLERLQQFD-APPALLGFGISEPAQVKQAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp CC--------CCHHHHHHHHHHHHTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred ccCCCCcccCCchhHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 45766754 4555567788888876 6899999999 599999888999999999999986
No 74
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.44 E-value=6.7e-07 Score=62.05 Aligned_cols=60 Identities=12% Similarity=0.199 Sum_probs=50.5
Q ss_pred HHHHHHhCCCCcEEEEcCCCcc------cHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 20 VKWLRENYPTLNIEVDGGVGPN------TIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dGGI~~~------ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
++++.+.. ++|+.+.||++.+ ++.+..++||+++++|+.||+++||.+.++.+++.+.+.
T Consensus 215 ~~~vv~~~-~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~~ivh~~ 280 (295)
T 3glc_A 215 FERIVAGC-PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHN 280 (295)
T ss_dssp HHHHHHTC-SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHhC-CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHHHHHhCC
Confidence 45555544 5899999999864 588888999999999999999999999999999887653
No 75
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.42 E-value=1.5e-06 Score=59.72 Aligned_cols=62 Identities=16% Similarity=0.264 Sum_probs=53.0
Q ss_pred HHHHHHHHHhCCC-CcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 17 MPKVKWLRENYPT-LNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 17 ~~ki~~~~~~~~~-~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
.+.|+++++..++ +|+.++|||.. +.+....+.|||++.++|+|++++||....++|.+.++
T Consensus 165 ~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 165 RALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRLAVE 228 (268)
T ss_dssp HHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 3346677773356 89999999975 99999999999999999999999999999999988765
No 76
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=98.37 E-value=3.4e-07 Score=63.31 Aligned_cols=51 Identities=14% Similarity=0.221 Sum_probs=39.0
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCC
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
|.|+.+++..+.. .+++|+++.|||+++|+.++.++|+|++++|+.++.++
T Consensus 225 ~~~~~~k~av~~v--~~~ipi~AsGGIt~eni~~~a~tGvD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 225 FPLEALREAVRRV--GGRVPLEASGNMTLERAKAAAEAGVDYVSVGALTHSAK 275 (286)
T ss_dssp CCHHHHHHHHHHH--TTSSCEEEESSCCHHHHHHHHHHTCSEEECTHHHHSCC
T ss_pred CCHHHHHHHHHHh--CCCCeEEEEcCCCHHHHHHHHHcCCCEEEEcHHHcCCC
Confidence 4444444433322 23689999999999999999999999999999887643
No 77
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.33 E-value=5.7e-07 Score=61.31 Aligned_cols=62 Identities=23% Similarity=0.225 Sum_probs=48.2
Q ss_pred CCCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHH
Q psy11601 8 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAI 70 (82)
Q Consensus 8 ~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~ 70 (82)
.|....+..++.++++++.. ++||.+.||| +.+++.+++++|||.+.+|++++..++..+.+
T Consensus 221 ~g~~~~~~~~~~i~~i~~~~-~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i 283 (311)
T 1ep3_A 221 SGPAIKPVALKLIHQVAQDV-DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKI 283 (311)
T ss_dssp ESGGGHHHHHHHHHHHHTTC-SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHH
T ss_pred cCccchHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHH
Confidence 34333333467788888765 7999999999 79999999999999999999988766654333
No 78
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=98.31 E-value=2.4e-07 Score=64.19 Aligned_cols=37 Identities=14% Similarity=0.266 Sum_probs=27.5
Q ss_pred CCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCC
Q psy11601 28 PTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 28 ~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
|+++|++.|||+++|+.++.++|+|.+++||.++.++
T Consensus 248 ~~v~I~ASGGIt~~ni~~~~~~GvD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 248 KHFLLECSGGLNLDNLEEYLCDDIDIYSTSSIHQGTP 284 (294)
T ss_dssp -CCEEEEECCCCC------CCCSCSEEECGGGTSSCC
T ss_pred CCeEEEEECCCCHHHHHHHHHcCCCEEEEechhcCCC
Confidence 4589999999999999999999999999999988643
No 79
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=98.27 E-value=3.3e-06 Score=58.45 Aligned_cols=52 Identities=15% Similarity=0.120 Sum_probs=44.7
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCC
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPD 65 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d 65 (82)
....++.++++++.. ++|+.++||| +.+++..++..|||++.+||+++..++
T Consensus 157 ~~~~~~~l~~v~~~~-~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 157 DIPGLVLLPAAANRL-RVPIIASGGFADGRGLVAALALGADAINMGTRFLATRE 209 (328)
T ss_dssp CCCHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSS
T ss_pred cccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCcc
Confidence 346778888888765 6999999999 689999999999999999999988654
No 80
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.25 E-value=1.4e-06 Score=58.28 Aligned_cols=50 Identities=22% Similarity=0.210 Sum_probs=40.8
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCCCCH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINCPDR 66 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~~d~ 66 (82)
.++.++++++.. ++|+.+.|||+. +++.++.++|||++++||+++..++.
T Consensus 188 ~~~~i~~l~~~~-~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~ 238 (266)
T 2w6r_A 188 DTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREID 238 (266)
T ss_dssp CHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-----
T ss_pred CHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCC
Confidence 478888888875 699999999995 99999999999999999999987643
No 81
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.24 E-value=1.3e-07 Score=63.03 Aligned_cols=57 Identities=26% Similarity=0.328 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCCHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPDRIQAISTL 73 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l 73 (82)
.++.++++++.. ++|+.+.|||+ ++++.++.++|||.+++|++++..+++...+.+.
T Consensus 188 ~~~~~~~i~~~~-~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~~~~~~ 245 (247)
T 3tdn_A 188 DTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQT 245 (247)
T ss_dssp -----------------------------------------------------------
T ss_pred CHHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHHHHHHHHh
Confidence 345566666654 68999999998 9999999999999999999999988887766543
No 82
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=98.23 E-value=2.2e-06 Score=59.66 Aligned_cols=47 Identities=21% Similarity=0.247 Sum_probs=37.6
Q ss_pred HHHHHHHH-hCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCC
Q psy11601 18 PKVKWLRE-NYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 18 ~ki~~~~~-~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
+.++++.+ ..+++++++.|||+++|+.+|.++|+|.|++|+....++
T Consensus 241 ~~l~~av~~i~~~v~ieaSGGI~~~~i~~~a~tGVD~isvG~lt~sa~ 288 (298)
T 3gnn_A 241 DMMRDAVRVTEGRAVLEVSGGVNFDTVRAIAETGVDRISIGALTKDVR 288 (298)
T ss_dssp HHHHHHHHHHTTSEEEEEESSCSTTTHHHHHHTTCSEEECGGGGTSCC
T ss_pred HHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcCCCEEEECCeecCCC
Confidence 34444332 346799999999999999999999999999999876543
No 83
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.22 E-value=1.7e-06 Score=59.37 Aligned_cols=70 Identities=21% Similarity=0.231 Sum_probs=52.8
Q ss_pred CCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC-CCCHHHHH-HHHHHHH
Q psy11601 8 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN-CPDRIQAI-STLKSSV 77 (82)
Q Consensus 8 ~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~-~~d~~~~~-~~l~~~~ 77 (82)
.|....|..++.++++++..+++||.+.|||+ .+++.+++.+|||.+.+|++++. .+++-..+ +.+++.+
T Consensus 223 sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~~l~~~~ 295 (314)
T 2e6f_A 223 GGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLEDELLEIM 295 (314)
T ss_dssp ESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHHHHHHHH
Confidence 34444456678888888876679999999995 89999999999999999999884 66654444 3344433
No 84
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=98.21 E-value=2.4e-06 Score=59.50 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=38.8
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCC
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
|.|+.+++..+.. .+++.+++.|||+++|+.+|++.|+|.|++|+.....
T Consensus 236 ~s~~~l~~av~~~--~~~v~leaSGGIt~~~i~~~A~tGVD~IsvGalthsa 285 (300)
T 3l0g_A 236 MSISEIKKAVDIV--NGKSVLEVSGCVNIRNVRNIALTGVDYISIGCITNSF 285 (300)
T ss_dssp CCHHHHHHHHHHH--TTSSEEEEESSCCTTTHHHHHTTTCSEEECGGGTSSC
T ss_pred CCHHHHHHHHHhh--cCceEEEEECCCCHHHHHHHHHcCCCEEEeCccccCC
Confidence 5554454443322 3478999999999999999999999999999877653
No 85
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=98.20 E-value=1.6e-06 Score=60.08 Aligned_cols=49 Identities=22% Similarity=0.346 Sum_probs=38.1
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccC
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
|.++.++++.+.. .+++++++.|||+++|+++|+++|+|.|++|+..-.
T Consensus 227 ~~~~~l~~av~~~--~~~v~ieaSGGIt~~~i~~~a~tGVD~IsvGalt~s 275 (287)
T 3tqv_A 227 FSGEDIDIAVSIA--RGKVALEVSGNIDRNSIVAIAKTGVDFISVGAITKH 275 (287)
T ss_dssp CCHHHHHHHHHHH--TTTCEEEEESSCCTTTHHHHHTTTCSEEECSHHHHS
T ss_pred CCHHHHHHHHHhh--cCCceEEEECCCCHHHHHHHHHcCCCEEEEChhhcC
Confidence 4554444443322 257999999999999999999999999999987654
No 86
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.16 E-value=3.7e-06 Score=59.16 Aligned_cols=49 Identities=22% Similarity=0.332 Sum_probs=43.5
Q ss_pred HHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDR 66 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~ 66 (82)
++.++++++.. ++|+.++||| +.+++.++++.|||+|.+||.++..+++
T Consensus 197 ~~~l~~i~~~~-~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 197 LSLLAQVREAV-DIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDES 246 (369)
T ss_dssp HHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTC
T ss_pred HHHHHHHHHhc-CceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccc
Confidence 77788887765 6999999999 9999999999999999999999986654
No 87
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.13 E-value=2.5e-06 Score=58.42 Aligned_cols=59 Identities=20% Similarity=0.244 Sum_probs=47.0
Q ss_pred CCCCCcchHHHHHHHHHhCC-CCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccC-CCCHH
Q psy11601 9 GQKFMQDMMPKVKWLRENYP-TLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN-CPDRI 67 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~-~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~-~~d~~ 67 (82)
|....|..++.++++++..+ ++||.+.||| +.+++.+++.+|||.+.+|++++. .+++-
T Consensus 221 g~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~ 282 (311)
T 1jub_A 221 GAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIF 282 (311)
T ss_dssp SGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHH
T ss_pred cccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHH
Confidence 44444556788888887653 7999999999 789999999999999999999874 55543
No 88
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=98.11 E-value=2.3e-06 Score=60.10 Aligned_cols=49 Identities=24% Similarity=0.466 Sum_probs=38.0
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccC
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
|.++.++++.+. ..+++++++.|||+++|+.+|.++|+|.|++|+....
T Consensus 260 ~~~~~l~~av~~--l~~~v~ieaSGGIt~~~I~~~a~tGVD~isvGalt~s 308 (320)
T 3paj_A 260 FSLEMMREAVKI--NAGRAALENSGNITLDNLKECAETGVDYISVGALTKH 308 (320)
T ss_dssp CCHHHHHHHHHH--HTTSSEEEEESSCCHHHHHHHHTTTCSEEECTHHHHS
T ss_pred CCHHHHHHHHHH--hCCCCeEEEECCCCHHHHHHHHHcCCCEEEECceecC
Confidence 444444444332 2357999999999999999999999999999987654
No 89
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=98.08 E-value=1.8e-06 Score=59.87 Aligned_cols=49 Identities=20% Similarity=0.278 Sum_probs=39.9
Q ss_pred chHHHHHHHHHhC-CCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCC
Q psy11601 15 DMMPKVKWLRENY-PTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 15 ~~~~ki~~~~~~~-~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
-..+.++++++.. +++++++.|||+++|+.++.++|+|.|++|+.++.+
T Consensus 237 ~~~e~l~~~v~~~~~~~~I~ASGGIt~~~i~~~a~~GvD~isvGsli~~a 286 (296)
T 1qap_A 237 FNTDQMREAVKRVNGQARLEVSGNVTAETLREFAETGVDFISVGALTKHV 286 (296)
T ss_dssp CCHHHHHHHHHTTCTTCCEEECCCSCHHHHHHHHHTTCSEEECSHHHHEE
T ss_pred CCHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcCCCEEEEeHHHcCC
Confidence 3445566655543 469999999999999999999999999999987753
No 90
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.04 E-value=5.4e-06 Score=56.42 Aligned_cols=71 Identities=21% Similarity=0.218 Sum_probs=51.7
Q ss_pred CCCCCCCC--CcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccC---CCCHHHHHHHHHHHH
Q psy11601 5 PGFGGQKF--MQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN---CPDRIQAISTLKSSV 77 (82)
Q Consensus 5 pG~~gq~~--~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~---~~d~~~~~~~l~~~~ 77 (82)
.|..|.+- .+...+.++++|+.. +.|+.+-+|| +++++..+.+ +||++|+||++.+ ..++.+..+.+.+.+
T Consensus 174 ~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk~i~~~~~~~~~~~~~~~~ 250 (252)
T 3tha_A 174 IGITGTKSVEEAILQDKVKEIRSFT-NLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVKCFKQGNLDIIMKDIEEIF 250 (252)
T ss_dssp SCSSSCSHHHHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHHHTTSSCHHHHHHHHHHHC
T ss_pred CCCCCcccCCCHHHHHHHHHHHHhc-CCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHHHHHhcCHHHHHHHHHHHh
Confidence 46667652 233455677788775 6899999999 8899998876 6999999999875 346665555555443
No 91
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.03 E-value=6.4e-06 Score=56.30 Aligned_cols=54 Identities=24% Similarity=0.389 Sum_probs=40.0
Q ss_pred CCCCCC--CCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 6 GFGGQK--FMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 6 G~~gq~--~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
|+.|.. +.+...+.++++++.. ++|+.+-|||+ ++++.++ .|||++|+||+|.+
T Consensus 178 G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~ 234 (271)
T 1ujp_A 178 GVTGMRERLPEEVKDLVRRIKART-ALPVAVGFGVSGKATAAQA--AVADGVVVGSALVR 234 (271)
T ss_dssp -----------CCHHHHHHHHTTC-CSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHH
T ss_pred cccCCCCCCCccHHHHHHHHHhhc-CCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhc
Confidence 444432 3445567788888875 79999999998 9999997 89999999999986
No 92
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=97.99 E-value=7.9e-06 Score=56.81 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=43.0
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCC
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPD 65 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d 65 (82)
..++-+.++++.. ++|+.++|||+ .+++..++..||+++.+||+++..++
T Consensus 163 ~~~~ll~~i~~~~-~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e 213 (326)
T 3bo9_A 163 TTFVLVNKVSRSV-NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVE 213 (326)
T ss_dssp CHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSS
T ss_pred cHHHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCcc
Confidence 4677788877765 68999999998 99999999999999999999887543
No 93
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.95 E-value=9.2e-06 Score=53.74 Aligned_cols=54 Identities=15% Similarity=0.206 Sum_probs=44.6
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHc-----C-CCEEEEeccccCCC-CHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKA-----G-ANWIVSGTAVINCP-DRIQAI 70 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~-----G-ad~vv~gs~i~~~~-d~~~~~ 70 (82)
.++.++++++.. ++|+.+.|||+. +++.++.+. | +|++++||+++..+ ++.+..
T Consensus 176 ~~~~i~~l~~~~-~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 176 DFSLTKKIAIEA-EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVMK 237 (241)
T ss_dssp CHHHHHHHHHHH-TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHHH
T ss_pred CHHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHHH
Confidence 477788877765 689999999995 999999998 9 99999999999754 454443
No 94
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.95 E-value=6.5e-06 Score=58.28 Aligned_cols=71 Identities=23% Similarity=0.253 Sum_probs=53.4
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCC-CCHHHHH-HHHHHHH
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINC-PDRIQAI-STLKSSV 77 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~-~d~~~~~-~~l~~~~ 77 (82)
+.|....|-.++.++++++..+++||.+.|||. .+.+.+++.+|||.|.+|++++.. +.+.+.+ +.|.+.+
T Consensus 255 lSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~~~l~~~m 328 (354)
T 4ef8_A 255 LGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVM 328 (354)
T ss_dssp EEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHHHHHHHHH
Confidence 345555567788899998876679999999995 889999999999999999997753 5544333 3344433
No 95
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.94 E-value=1.7e-05 Score=53.93 Aligned_cols=59 Identities=12% Similarity=0.226 Sum_probs=50.6
Q ss_pred HHHHHHHHHhCC-CCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 17 MPKVKWLRENYP-TLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 17 ~~ki~~~~~~~~-~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
++...++.+..| +.++++-|||+ ++.+..+.++ +|.|++|++|.+++||.+.+++|...
T Consensus 189 ~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr~~d~~~~~~~l~~~ 249 (251)
T 1i4n_A 189 KNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKAENPRRFLEEMRAW 249 (251)
T ss_dssp TTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHHCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHhC
Confidence 666667666554 47889999996 9999999999 99999999999999999999988753
No 96
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=97.88 E-value=1.3e-05 Score=55.61 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=43.0
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCC
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
...++-++++++.. ++|+.++|||+ .+++..++..|||++.+||+++..+
T Consensus 148 ~~~~~ll~~i~~~~-~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~ 198 (332)
T 2z6i_A 148 LTTMTLVRQVATAI-SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAK 198 (332)
T ss_dssp SCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBT
T ss_pred ccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCc
Confidence 34667778877765 69999999998 9999999999999999999988754
No 97
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.88 E-value=6.2e-05 Score=48.13 Aligned_cols=57 Identities=25% Similarity=0.243 Sum_probs=46.8
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEecccc-CCCCHHHHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVI-NCPDRIQAISTLK 74 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~-~~~d~~~~~~~l~ 74 (82)
.+.|++++... +.|+.+.||++ ++++.++.+.|+|++++||+++ ++.++.+..+.++
T Consensus 163 ~~~i~~~~~~~-~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~~~~~~~~~~l~ 221 (237)
T 3cwo_X 163 TEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLK 221 (237)
T ss_dssp HHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcCCCCHHHHHHHHH
Confidence 67788877765 68999999998 7899999999999999999985 4567777666554
No 98
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.88 E-value=1.4e-05 Score=56.76 Aligned_cols=60 Identities=20% Similarity=0.148 Sum_probs=47.5
Q ss_pred CCCCCCCcchHHHHHHHHHhCC-CCcEEEEcCCC-cccHHHHHHcCCCEEEEeccc-cCCCCH
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVG-PNTIDECAKAGANWIVSGTAV-INCPDR 66 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~-~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i-~~~~d~ 66 (82)
+.|....|..++.++++++..+ ++||.+.|||. .+.+.+++.+|||.|.+|+++ +..+.+
T Consensus 275 lSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~ 337 (367)
T 3zwt_A 275 LSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPV 337 (367)
T ss_dssp EEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHH
T ss_pred cCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHH
Confidence 3444455566788999888764 79999999994 889999999999999999997 554443
No 99
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=97.88 E-value=1.2e-05 Score=56.79 Aligned_cols=61 Identities=23% Similarity=0.277 Sum_probs=48.3
Q ss_pred CCCCCCCcchHHHHHHHHHhCC-CCcEEEEcCCC-cccHHHHHHcCCCEEEEecc-ccCCCCHH
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVG-PNTIDECAKAGANWIVSGTA-VINCPDRI 67 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~-~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~-i~~~~d~~ 67 (82)
+.|....|-.++.++++++..+ ++||.+.|||. .+.+.+++.+|||.|.+|++ ++..+.+.
T Consensus 252 lSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~ 315 (345)
T 3oix_A 252 IGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIF 315 (345)
T ss_dssp EEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHH
T ss_pred cCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHH
Confidence 3445555666788899888764 69999999995 68888999999999999999 67655443
No 100
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=97.80 E-value=1.2e-05 Score=56.38 Aligned_cols=50 Identities=22% Similarity=0.278 Sum_probs=42.2
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCC
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
+..++.++++++..+++||.+.||| +.+.+.++++ |||.|.+|++++..+
T Consensus 182 ~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P 232 (350)
T 3b0p_A 182 PLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDP 232 (350)
T ss_dssp CCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCG
T ss_pred cccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCc
Confidence 3467788888887667999999999 7899999998 999999999876533
No 101
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.77 E-value=0.0001 Score=50.96 Aligned_cols=51 Identities=18% Similarity=0.180 Sum_probs=41.4
Q ss_pred CcchHHHHHHHHHhCC-CCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCC
Q psy11601 13 MQDMMPKVKWLRENYP-TLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~-~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
.+...+.++++++... ++|+.+-||| +.+.+.+++++|||.+++||++...
T Consensus 210 ~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d 262 (286)
T 3vk5_A 210 EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQP 262 (286)
T ss_dssp SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSST
T ss_pred CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcC
Confidence 3445566777777653 6899999999 4688899999999999999999975
No 102
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=97.74 E-value=3.2e-05 Score=54.10 Aligned_cols=72 Identities=22% Similarity=0.218 Sum_probs=54.1
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEecc-ccCCCCHHHH-HHHHHHHHH
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTA-VINCPDRIQA-ISTLKSSVQ 78 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~-i~~~~d~~~~-~~~l~~~~~ 78 (82)
+.|.+..|-.++-++++++..+.+||...|||. .+.+.+.+.+||+.|-++|+ +|..+..... .+.|.+.++
T Consensus 255 lSG~~~~~~a~~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~~L~~~L~ 329 (354)
T 3tjx_A 255 LGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMA 329 (354)
T ss_dssp EEGGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHHHHHHHHHHH
Confidence 446666677777788887777789999999995 78899999999999999998 5665654433 345555554
No 103
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.72 E-value=4e-05 Score=54.24 Aligned_cols=47 Identities=17% Similarity=0.345 Sum_probs=37.7
Q ss_pred hHHHHHHHH---HhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCC
Q psy11601 16 MMPKVKWLR---ENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 16 ~~~ki~~~~---~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
.++.+.+++ +.. ++||.++||| +.+++..++.+|||.+.+||+++..
T Consensus 192 ~~~~i~~v~~~~~~~-~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t 242 (361)
T 3khj_A 192 QITAIEKCSSVASKF-GIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGT 242 (361)
T ss_dssp HHHHHHHHHHHHHHH-TCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTB
T ss_pred cHHHHHHHHHHHhhc-CCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcC
Confidence 344455543 322 5899999999 7999999999999999999999874
No 104
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.70 E-value=8.8e-05 Score=49.72 Aligned_cols=50 Identities=18% Similarity=0.363 Sum_probs=41.2
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCCH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPDR 66 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d~ 66 (82)
.++-|+++.+.. .+|+.+.|||+ .++++.++.+||+-++++|+.+..++.
T Consensus 63 ~~~~i~~i~~~~-~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~l 113 (243)
T 4gj1_A 63 QFALIEKLAKEV-SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATL 113 (243)
T ss_dssp CHHHHHHHHHHC-CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHH
T ss_pred HHHHHHHHHHhc-CCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCch
Confidence 345566666664 58999999995 599999999999999999999976554
No 105
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.70 E-value=3.4e-05 Score=52.09 Aligned_cols=50 Identities=28% Similarity=0.265 Sum_probs=41.3
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCCCC
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINCPD 65 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~~d 65 (82)
...+.++++++...++|+.+-|||+- +.++++.+ |||.+|+||++.+..+
T Consensus 168 ~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~~~ 218 (240)
T 1viz_A 168 GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYEDFD 218 (240)
T ss_dssp CCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHCHH
T ss_pred ChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhCHH
Confidence 35667788887754689999999985 88999888 9999999999996544
No 106
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=97.69 E-value=0.00014 Score=48.63 Aligned_cols=70 Identities=10% Similarity=0.264 Sum_probs=57.1
Q ss_pred CCCCcchHHHHHH-HHHhCCCCcEEEEcCCCcccHH-HHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 10 QKFMQDMMPKVKW-LRENYPTLNIEVDGGVGPNTID-ECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 10 q~~~~~~~~ki~~-~~~~~~~~~i~~dGGI~~~ni~-~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
+.+.++.++...+ ++...+++++..-|||+..|.. .+.+.|+|++-+|+++.+++|+.+.+++|.+.+.+
T Consensus 153 ~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~~l~~~~~~ 224 (226)
T 1w0m_A 153 SRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAKPLSE 224 (226)
T ss_dssp HHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHHHHHHHHHh
Confidence 5677776777666 4555456899999999977665 56788999999999999999999999999888765
No 107
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=97.67 E-value=7.9e-05 Score=50.83 Aligned_cols=45 Identities=24% Similarity=0.483 Sum_probs=40.5
Q ss_pred EEEEcCCCcc-----------cHHHHH-HcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 32 IEVDGGVGPN-----------TIDECA-KAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 32 i~~dGGI~~~-----------ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.+.-||++. |..+.. ++|+|.+|+|++||+++||.++++++++.
T Consensus 193 ~~vTPGIr~~~~~~~~~~r~~tp~~a~~~aGad~iVvGR~I~~a~dp~~a~~~~~~~ 249 (260)
T 3eww_A 193 LHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKA 249 (260)
T ss_dssp EEEECSBCSSSEECTTSCEEBCHHHHHTTSCCSEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred EEECCCcCCCCCCCccCCCccCHHHHHHhcCCCEEEEChhhcCCCCHHHHHHHHHHH
Confidence 6678899875 688999 99999999999999999999999999864
No 108
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.67 E-value=7.3e-05 Score=50.17 Aligned_cols=48 Identities=27% Similarity=0.241 Sum_probs=39.0
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
..+.++++++...++|+.+=|||+ ++.++++. .|||.+|+||++.+.+
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p 215 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDF 215 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCH
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCH
Confidence 466677777765358999999995 68888887 7999999999999743
No 109
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=97.67 E-value=9.1e-05 Score=51.60 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=41.9
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
.+...+.|+++++..+++||.++|||+ .+.+.+++.+|||.|.+|++++.
T Consensus 235 g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~ 285 (349)
T 1p0k_A 235 GISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLK 285 (349)
T ss_dssp SCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHH
Confidence 345667778877765579999999997 89999999999999999999764
No 110
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=97.63 E-value=7.9e-05 Score=52.92 Aligned_cols=48 Identities=17% Similarity=0.228 Sum_probs=38.3
Q ss_pred hHHHHHHHHHh--CCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCC
Q psy11601 16 MMPKVKWLREN--YPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 16 ~~~ki~~~~~~--~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
.++-|.++++. ..++|+.++||| +.+++..++++|||.+.+||.+...
T Consensus 196 ~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t 246 (366)
T 4fo4_A 196 QITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGT 246 (366)
T ss_dssp HHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred hHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcC
Confidence 44555554432 136999999999 7899999999999999999998873
No 111
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=97.62 E-value=0.00022 Score=47.65 Aligned_cols=66 Identities=15% Similarity=0.199 Sum_probs=54.3
Q ss_pred CCCCcchHHHHHH-HHHhCCCCcEEEEcCCCcccHH-HHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 10 QKFMQDMMPKVKW-LRENYPTLNIEVDGGVGPNTID-ECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 10 q~~~~~~~~ki~~-~~~~~~~~~i~~dGGI~~~ni~-~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
+.+.++.++...+ ++...+++++..-|||+..|.. .+.+.|+|++-+|+++.+++|+.+.+++|.+
T Consensus 156 ~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~~~~~i~~l~~ 223 (225)
T 1hg3_A 156 SKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPEKAIWDLVS 223 (225)
T ss_dssp TTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSSHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcCHHHHHHHHHh
Confidence 6788887777766 4555556899999999977665 5678899999999999999999998888765
No 112
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.61 E-value=5.1e-05 Score=52.41 Aligned_cols=51 Identities=16% Similarity=0.271 Sum_probs=40.1
Q ss_pred HHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHH-cCCCEEEEeccccCCCCHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGV-GPNTIDECAK-AGANWIVSGTAVINCPDRIQAI 70 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~-~Gad~vv~gs~i~~~~d~~~~~ 70 (82)
++-++++++ ++||.+.||| +.+.+.++++ .|||.|.+|++++..++....+
T Consensus 174 ~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~ 226 (318)
T 1vhn_A 174 WKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQI 226 (318)
T ss_dssp GGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHH
T ss_pred HHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHH
Confidence 344455544 6899999999 8899999998 7999999999988766655444
No 113
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=97.59 E-value=0.00014 Score=49.43 Aligned_cols=64 Identities=20% Similarity=0.218 Sum_probs=46.5
Q ss_pred HHHHHHHHhCCCCcEEEEc-CCCcccHHHHHHcCCC----E--EEEeccccCCCCHHHHHHHHHHHHHHhh
Q psy11601 18 PKVKWLRENYPTLNIEVDG-GVGPNTIDECAKAGAN----W--IVSGTAVINCPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dG-GI~~~ni~~~~~~Gad----~--vv~gs~i~~~~d~~~~~~~l~~~~~~~~ 81 (82)
+.++.+|+..++.++.+=| |....+..+..++|+| . +++|+.|+.++||.++++++++.+++..
T Consensus 182 ~e~~~ir~~~~~~~~l~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A~dp~~aa~~i~~~i~~~~ 252 (255)
T 3qw3_A 182 VALARVRARAPTLWFLVPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINAIR 252 (255)
T ss_dssp HHHHHHHHHCSSCCEEECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCeEEECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCCCCHHHHHHHHHHHHHHHH
Confidence 3456666665555565433 3344488999999999 4 9999999999999999999999887653
No 114
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.59 E-value=8.6e-05 Score=51.73 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=46.6
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
.++-++++++.. ++||.+.||| +.+.+.++++.| ||.|.+|++++..+|+...+.
T Consensus 265 ~~~~~~~ir~~~-~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~ 321 (338)
T 1z41_A 265 QVSFAEKIREQA-DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAA 321 (338)
T ss_dssp THHHHHHHHHHH-CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHH
T ss_pred hHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHH
Confidence 456677777765 6899999999 799999999999 999999999988888766554
No 115
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=97.55 E-value=0.00012 Score=52.06 Aligned_cols=46 Identities=20% Similarity=0.329 Sum_probs=39.0
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
.++.|.++.+... ||.+||||+ .+++...+++|||.+.+|+.++..
T Consensus 188 ~l~aI~~~~~~~~--PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t 234 (361)
T 3r2g_A 188 MLTCIQDCSRADR--SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGS 234 (361)
T ss_dssp HHHHHHHHTTSSS--EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTB
T ss_pred HHHHHHHHHHhCC--CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCC
Confidence 6677777665442 999999995 999999999999999999999874
No 116
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.54 E-value=3.1e-05 Score=53.65 Aligned_cols=54 Identities=22% Similarity=0.159 Sum_probs=42.7
Q ss_pred cchHHHHHHHHHhCC-CCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC-CCCHH
Q psy11601 14 QDMMPKVKWLRENYP-TLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN-CPDRI 67 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~-~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~-~~d~~ 67 (82)
+..++.++++++..+ ++||.+.|||+ .+.+.+++++|||.|.+|+++.. .+++.
T Consensus 273 ~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~ 329 (336)
T 1f76_A 273 LKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLI 329 (336)
T ss_dssp HHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHH
Confidence 445677778777543 69999999995 89999999999999999998654 44443
No 117
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=97.54 E-value=0.00018 Score=50.80 Aligned_cols=54 Identities=17% Similarity=0.196 Sum_probs=46.7
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
++-++++++.. ++||.+.|||+++++.++++.| ||.|.+|++++..+++...++
T Consensus 283 ~~~~~~v~~~~-~iPvi~~Ggit~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~ 337 (364)
T 1vyr_A 283 EAFRQKVRERF-HGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQ 337 (364)
T ss_dssp HHHHHHHHHHC-CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHHC-CCCEEEECCcCHHHHHHHHHCCCccEEEECHHHHhChhHHHHHH
Confidence 45677777776 6899999999999999999998 999999999998888876654
No 118
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=97.53 E-value=0.00015 Score=51.13 Aligned_cols=54 Identities=22% Similarity=0.286 Sum_probs=46.2
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
.+-++++++.. ++||.+.|||+++++.++++.| ||.|.+|++++..+++...++
T Consensus 282 ~~~~~~i~~~~-~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~ 336 (365)
T 2gou_A 282 VSFKRALREAY-QGVLIYAGRYNAEKAEQAINDGLADMIGFGRPFIANPDLPERLR 336 (365)
T ss_dssp HHHHHHHHHHC-CSEEEEESSCCHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHHC-CCcEEEeCCCCHHHHHHHHHCCCcceehhcHHHHhCchHHHHHH
Confidence 35567777776 6899999999999999999999 999999999988888876654
No 119
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=97.53 E-value=0.00012 Score=51.90 Aligned_cols=54 Identities=13% Similarity=0.122 Sum_probs=46.2
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
++-++++++.. ++||.+.|||+++.+.++++.| ||.|.+|++++..+|+...++
T Consensus 288 ~~~~~~ik~~~-~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~ 342 (377)
T 2r14_A 288 EGFREQMRQRF-KGGLIYCGNYDAGRAQARLDDNTADAVAFGRPFIANPDLPERFR 342 (377)
T ss_dssp TTHHHHHHHHC-CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHHC-CCCEEEECCCCHHHHHHHHHCCCceEEeecHHHHhCchHHHHHH
Confidence 45567777776 6899999999999999999998 999999999998888876654
No 120
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=97.51 E-value=0.00016 Score=51.06 Aligned_cols=66 Identities=12% Similarity=0.191 Sum_probs=48.2
Q ss_pred cchHHHHHHHHHhCC-CCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCC------CCHHHHHHHHHHHHHH
Q psy11601 14 QDMMPKVKWLRENYP-TLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINC------PDRIQAISTLKSSVQK 79 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~-~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~------~d~~~~~~~l~~~~~~ 79 (82)
+..++-+.++++..+ ++||.++||| +.+++..++.+|||.+.+|++++.. +...+.++.+.+.++.
T Consensus 264 ~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~~gv~~~~~~l~~el~~ 337 (370)
T 1gox_A 264 PATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFEL 337 (370)
T ss_dssp CCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 457777888877543 6999999999 5569999999999999999986532 1233455555555543
No 121
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.49 E-value=0.00015 Score=56.73 Aligned_cols=64 Identities=20% Similarity=0.190 Sum_probs=48.7
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccC-CCCHH-HHHHHHHHHH
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN-CPDRI-QAISTLKSSV 77 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~-~~d~~-~~~~~l~~~~ 77 (82)
|..++-++++++..+++||.+.||| +.+.+.+++.+|||.+.+|++++. ..+.. .....|+..+
T Consensus 772 ~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~~l~~~l 838 (1025)
T 1gte_A 772 PIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALL 838 (1025)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHHHHHHHHHH
Confidence 3345778888877667999999999 889999999999999999999775 55433 3334455444
No 122
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.46 E-value=0.00017 Score=50.53 Aligned_cols=55 Identities=18% Similarity=0.257 Sum_probs=45.7
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
.++-++++++.. ++||.+.||| +++++.++++.| ||.|.+|++++..+|+...+.
T Consensus 276 ~~~~~~~ir~~~-~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~ 332 (349)
T 3hgj_A 276 QVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAA 332 (349)
T ss_dssp THHHHHHHHHHH-CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHH
T ss_pred cHHHHHHHHHHc-CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHH
Confidence 455667777664 5899999999 699999999999 999999999998888765554
No 123
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.43 E-value=0.00031 Score=49.18 Aligned_cols=56 Identities=16% Similarity=0.223 Sum_probs=46.7
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEeccccCCCCHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIST 72 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~~ 72 (82)
.++-++++++.. ++||.+.||| +++.+.++++.| ||.|.+|++++..+|+...+.+
T Consensus 265 ~~~~~~~ik~~~-~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~ 322 (340)
T 3gr7_A 265 QVPFAELIRREA-DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAAR 322 (340)
T ss_dssp THHHHHHHHHHT-TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred cHHHHHHHHHHc-CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHH
Confidence 456677777776 6999999999 589999999999 9999999999988887665543
No 124
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.41 E-value=0.0002 Score=47.40 Aligned_cols=51 Identities=25% Similarity=0.306 Sum_probs=42.6
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCC
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPD 65 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d 65 (82)
...++.++++++.. ++|+.+.|||+ ++.+..++++|||.+++|+..+..++
T Consensus 65 ~~~~~~i~~i~~~~-~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~dp~ 116 (247)
T 3tdn_A 65 GYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPS 116 (247)
T ss_dssp CCCHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHCTH
T ss_pred cccHHHHHHHHHhC-CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhChH
Confidence 34567788888775 69999999997 57899999999999999999886555
No 125
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.00021 Score=48.34 Aligned_cols=59 Identities=10% Similarity=0.030 Sum_probs=44.9
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCC---CCHHHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC---PDRIQAISTLKSSV 77 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~---~d~~~~~~~l~~~~ 77 (82)
.++-|+++.+.. ++|+.+.|||+..++..++ +||+.+++||+.+.. .+| +.++++.+.+
T Consensus 64 n~~~i~~i~~~~-~~pv~vgGGir~~~~~~~l-~Ga~~Viigs~a~~~~g~~~p-~~~~~~~~~~ 125 (260)
T 2agk_A 64 NDDAAREALQES-PQFLQVGGGINDTNCLEWL-KWASKVIVTSWLFTKEGHFQL-KRLERLTELC 125 (260)
T ss_dssp CHHHHHHHHHHS-TTTSEEESSCCTTTHHHHT-TTCSCEEECGGGBCTTCCBCH-HHHHHHHHHH
T ss_pred CHHHHHHHHhcC-CceEEEeCCCCHHHHHHHh-cCCCEEEECcHHHhhcCCCCH-HHHHHHHHHh
Confidence 456677777765 5899999999999999999 999999999999964 014 3444544444
No 126
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.41 E-value=0.00011 Score=49.61 Aligned_cols=47 Identities=21% Similarity=0.261 Sum_probs=38.1
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
..+.++++++..++.|+.+=||| +++.++++.+ |||++|+||++++.
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~ 220 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKD 220 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHC
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecC
Confidence 35667777776546899999999 5677777776 99999999999973
No 127
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.40 E-value=0.00011 Score=49.50 Aligned_cols=47 Identities=15% Similarity=0.187 Sum_probs=39.8
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccC
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
...+.++++++...++|+.+-|||+- +.++++.+ |||.+++||++.+
T Consensus 176 ~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~ 223 (234)
T 2f6u_A 176 GNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGNVIYE 223 (234)
T ss_dssp CCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHH
T ss_pred chHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHh
Confidence 35667778887754689999999985 89999988 9999999999985
No 128
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=97.40 E-value=0.00055 Score=47.42 Aligned_cols=67 Identities=15% Similarity=0.154 Sum_probs=48.2
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC-----CCCHHHHHHHHHHHHHH
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN-----CPDRIQAISTLKSSVQK 79 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~-----~~d~~~~~~~l~~~~~~ 79 (82)
.+..++-|.++++..+++||.++|||. .+.+...+..|||.+.+|++++. .+...+.++.+++.++.
T Consensus 240 g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~ 312 (332)
T 1vcf_A 240 GIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRT 312 (332)
T ss_dssp SCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 345677788887775579999999994 67888888999999999988652 12233445555555443
No 129
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=97.38 E-value=0.0007 Score=48.01 Aligned_cols=63 Identities=24% Similarity=0.363 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCCcEEEEcCCCc--ccHHHHHHcCCC------EEEEeccccCCCCHHHHHHHHHHHHHHhh
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVGP--NTIDECAKAGAN------WIVSGTAVINCPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~~--~ni~~~~~~Gad------~vv~gs~i~~~~d~~~~~~~l~~~~~~~~ 81 (82)
+.++++|+..+++++ +.-||.. .+..++.+.|+| .+++|++|+.++||.++++++++.+.+.+
T Consensus 278 ~el~~IR~~~~~~~i-LtPGIgaqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~A~dp~~AA~~i~~ei~~a~ 348 (353)
T 2ffc_A 278 DEIKKIRELFPDCYI-LAPGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIKEVL 348 (353)
T ss_dssp HHHHHHHHHCTTCCE-EECCBSTTCBCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeE-EeCcccCCCCCHHHHHHcCCCcccCcEEEEECHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 444555665555554 3667754 568889999998 89999999999999999999998887543
No 130
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=97.36 E-value=0.00021 Score=50.32 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=45.9
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEeccccCCCCHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIST 72 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~~ 72 (82)
.++-++++++.. ++||.+.||| +++.+.++++.| ||.|.+|++++..+|+...+.+
T Consensus 283 ~~~~~~~ir~~~-~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~ 340 (363)
T 3l5l_A 283 MGPIAERVRREA-KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAK 340 (363)
T ss_dssp THHHHHHHHHHH-TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHH
T ss_pred hHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHH
Confidence 345566677665 5899999999 599999999999 9999999999988887665543
No 131
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.35 E-value=0.0003 Score=46.39 Aligned_cols=50 Identities=20% Similarity=0.308 Sum_probs=41.9
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCC
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPD 65 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d 65 (82)
..++.++++++.. ++|+.+.|||+ .+.+.++.++|||.+++|+..+..++
T Consensus 62 ~~~~~i~~i~~~~-~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~ 112 (252)
T 1ka9_F 62 ILLDVVARVAERV-FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPE 112 (252)
T ss_dssp HHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHCTH
T ss_pred ccHHHHHHHHHhC-CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhCcH
Confidence 3456677787764 79999999998 78999999999999999999886543
No 132
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=97.34 E-value=0.00011 Score=53.12 Aligned_cols=71 Identities=17% Similarity=0.075 Sum_probs=51.3
Q ss_pred CCCCCCCcchHHHHHHHHHhCC-CCcEEEEcCCC-cccHHHHHHcCCCEEEEecccc-CCCCHHHHH-HHHHHHH
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYP-TLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVI-NCPDRIQAI-STLKSSV 77 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~-~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~-~~~d~~~~~-~~l~~~~ 77 (82)
+.|....|..++-|+++++..+ ++||.+.|||+ .+.+.+++.+|||.|.+|++++ ..+.+...+ +.|.+.+
T Consensus 322 lSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~~~l 396 (415)
T 3i65_A 322 VSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLL 396 (415)
T ss_dssp EEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHH
T ss_pred cCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHHHHH
Confidence 4455555677888999888653 69999999996 6888899999999999999975 434443332 3344433
No 133
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.31 E-value=0.00033 Score=51.16 Aligned_cols=47 Identities=15% Similarity=0.253 Sum_probs=38.7
Q ss_pred hHHHHHHHHHh--CCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLREN--YPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~--~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
.++-+.++.+. ..++|+.++||| +.+++..++++|||.+.+||++..
T Consensus 317 ~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~ 366 (490)
T 4avf_A 317 QISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAG 366 (490)
T ss_dssp HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTT
T ss_pred HHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhc
Confidence 45556665542 136999999999 799999999999999999999876
No 134
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=97.30 E-value=0.00024 Score=50.37 Aligned_cols=63 Identities=16% Similarity=0.251 Sum_probs=42.9
Q ss_pred HHHHHHHhCCCCcE-----EEEcCCCcccHHHH--HHcCCCEEEEeccccCCCCHHHHHHHHHHHHHHhh
Q psy11601 19 KVKWLRENYPTLNI-----EVDGGVGPNTIDEC--AKAGANWIVSGTAVINCPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 19 ki~~~~~~~~~~~i-----~~dGGI~~~ni~~~--~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~~ 81 (82)
.++++|+..+++++ -+.||...+.+... .+.|++.+++|++|+.++||.++++++++.++.++
T Consensus 269 e~~~iR~~~~~~~iLtPGIGaqgGdq~rv~tp~~a~~~gadiIvVGR~I~~A~dp~~Aa~~i~~ei~~~l 338 (352)
T 2fds_A 269 EMKIIRNKFPDSYILSPGIGAQNGDLYKTLKNGYNKDYEKLLINVGRAITKSPNPKKSSESYYNQIIQIF 338 (352)
T ss_dssp HHHHHHHHSTTCCEEECCC-----CHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEcCccccccCcHHHhhCHHhHhhcCceEEEECHHHccCCCHHHHHHHHHHHHHHHH
Confidence 34445554456666 56777655545544 46799999999999999999999999998877553
No 135
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=97.29 E-value=0.0006 Score=47.19 Aligned_cols=48 Identities=17% Similarity=0.239 Sum_probs=38.6
Q ss_pred CCCCcchHHHHHHHHHh-CCCCcEEEEcCCCcccHHHHHH-cCCCEEEEe
Q psy11601 10 QKFMQDMMPKVKWLREN-YPTLNIEVDGGVGPNTIDECAK-AGANWIVSG 57 (82)
Q Consensus 10 q~~~~~~~~ki~~~~~~-~~~~~i~~dGGI~~~ni~~~~~-~Gad~vv~g 57 (82)
++-.++.++.|+++.+. ..+++|.+.|||+.+|+.++.+ +|++.|=+.
T Consensus 189 ~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 189 DSSALEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRILEGSGATEFHCS 238 (287)
T ss_dssp SSSTTTTHHHHHHHHHHHTTSSEEEECTTCCTTTHHHHHHHHCCSEEEEC
T ss_pred CCChHHhHHHHHHHHHHhCCCCEEEECCCcCHHHHHHHHHhhCCCEEeEC
Confidence 34457788888887664 3469999999999999999987 999988655
No 136
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=97.25 E-value=0.00047 Score=49.52 Aligned_cols=48 Identities=17% Similarity=0.241 Sum_probs=38.7
Q ss_pred hHHHHHHHHHh--CCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCC
Q psy11601 16 MMPKVKWLREN--YPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 16 ~~~ki~~~~~~--~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
.+.-+.++.+. ..++||.++||| +.+++..++.+||+.+.+|+++...
T Consensus 231 ~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t 281 (400)
T 3ffs_A 231 QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGT 281 (400)
T ss_dssp HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTB
T ss_pred HHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcC
Confidence 45556665543 136999999999 5999999999999999999998863
No 137
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.22 E-value=0.00053 Score=48.73 Aligned_cols=51 Identities=20% Similarity=0.307 Sum_probs=44.4
Q ss_pred HHHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 20 VKWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
++++++.. ++||.+.|||+++.+.++++.| ||.|.+|++++..+++...++
T Consensus 299 ~~~ir~~~-~iPvi~~G~it~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~ 350 (379)
T 3aty_A 299 VAWVRGSY-SGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQ 350 (379)
T ss_dssp HHHHHTTC-CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHC-CCcEEEECCCCHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHH
Confidence 77777776 6899999999999999999998 999999999888888766554
No 138
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=97.20 E-value=0.00017 Score=52.42 Aligned_cols=57 Identities=16% Similarity=0.029 Sum_probs=44.1
Q ss_pred cchHHHHHHHHHhC-CCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccc-cCCCCHHHHH
Q psy11601 14 QDMMPKVKWLRENY-PTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAV-INCPDRIQAI 70 (82)
Q Consensus 14 ~~~~~ki~~~~~~~-~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i-~~~~d~~~~~ 70 (82)
|..++-++++++.. .++||.+.||| +.+.+.+.+.+|||.|-+++++ +..+.+...+
T Consensus 357 ~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~gP~l~~~i 416 (443)
T 1tv5_A 357 DISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQI 416 (443)
T ss_dssp HHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcChHHHHHH
Confidence 44567788888765 37999999998 6889999999999999999995 4345444333
No 139
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=97.17 E-value=0.00051 Score=48.59 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=41.6
Q ss_pred HHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 21 KWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 21 ~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
+++++.. +.|+.+.||++++.+.++++.| +|.|.+|++++..+|+...++
T Consensus 280 ~~ik~~~-~iPvi~~Ggit~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~ 330 (361)
T 3gka_A 280 QQLKAAF-GGPFIVNENFTLDSAQAALDAGQADAVAWGKLFIANPDLPRRFK 330 (361)
T ss_dssp HHHHHHH-CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHc-CCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHH
Confidence 4444443 4799999999999999999998 999999999998888876554
No 140
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.0013 Score=44.43 Aligned_cols=59 Identities=15% Similarity=0.035 Sum_probs=45.6
Q ss_pred hHHHHHHHHHhCC---CCcEEEEcCC-CcccHHHHHHc--CCCEEEEeccc--cC-C-CCHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYP---TLNIEVDGGV-GPNTIDECAKA--GANWIVSGTAV--IN-C-PDRIQAISTLK 74 (82)
Q Consensus 16 ~~~ki~~~~~~~~---~~~i~~dGGI-~~~ni~~~~~~--Gad~vv~gs~i--~~-~-~d~~~~~~~l~ 74 (82)
.++-++++++..+ ++|+.+.||| +++.+..+.+. |++.+++|+++ |. . -++.+..+.++
T Consensus 189 d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~~~ 257 (260)
T 2agk_A 189 DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWNE 257 (260)
T ss_dssp CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHHHH
Confidence 5777777777653 6899999999 56999999988 99999999995 65 3 35555555444
No 141
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.17 E-value=0.00059 Score=49.77 Aligned_cols=50 Identities=18% Similarity=0.264 Sum_probs=41.2
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCC
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
+..+..++++++.. ++|+.++|||+ .+++..++.+|||.+.+|+++...+
T Consensus 344 ~~~~~~~~~~~~~~-~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~ 394 (514)
T 1jcn_A 344 GTAVYKVAEYARRF-GVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATT 394 (514)
T ss_dssp HHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTST
T ss_pred hhHHHHHHHHHhhC-CCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCC
Confidence 34566677777654 69999999996 7999999999999999999987643
No 142
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=97.17 E-value=0.0011 Score=48.29 Aligned_cols=63 Identities=21% Similarity=0.235 Sum_probs=49.3
Q ss_pred HHHHHHHHhCCCCcEEEEc-CCCcccHHHHHHcCCCE------EEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 18 PKVKWLRENYPTLNIEVDG-GVGPNTIDECAKAGANW------IVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dG-GI~~~ni~~~~~~Gad~------vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
+.++.+|+..++.++.+=| |....+..+..++|+|. +++|+.|+.++||.++++++++.+++.
T Consensus 183 ~e~~~ir~~~~~~~~l~PGig~qg~tp~~a~~~g~d~~~~~~livvgR~I~~A~dp~~aa~~i~~~i~~~ 252 (453)
T 3qw4_B 183 VALARVRARAPTLWFLVPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINAI 252 (453)
T ss_dssp HHHHHHHHHCSSCCEEECCSSTTCCCHHHHHHHHCCTTSCCEEEEESHHHHSCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEECCcCCCCCCHHHHHHhcCCcccCCceEecChhhccCCCHHHHHHHHHHHHHHH
Confidence 4456666665555666545 44556899999999998 999999999999999999999887653
No 143
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=97.14 E-value=0.00095 Score=47.74 Aligned_cols=54 Identities=24% Similarity=0.303 Sum_probs=45.9
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
++-++++++.. ++||.+.|||+++.+.++++.| ||.|.+|++++..+++...++
T Consensus 308 ~~~~~~vk~~~-~iPvi~~G~i~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~ 362 (402)
T 2hsa_B 308 ARLMRTLRNAY-QGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIK 362 (402)
T ss_dssp HHHHHHHHHHC-SSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHHC-CCCEEEeCCCCHHHHHHHHHCCCCceeeecHHHHhCchHHHHHH
Confidence 45566777776 6899999999999999999998 999999999988888876654
No 144
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=97.13 E-value=0.00075 Score=47.78 Aligned_cols=67 Identities=13% Similarity=0.259 Sum_probs=48.0
Q ss_pred CcchHHHHHHHHHh-CCCCcEEEEcCCC-cccHHHHHHcCCCEEEEecccc-C-----CCCHHHHHHHHHHHHHH
Q psy11601 13 MQDMMPKVKWLREN-YPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVI-N-----CPDRIQAISTLKSSVQK 79 (82)
Q Consensus 13 ~~~~~~ki~~~~~~-~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~-~-----~~d~~~~~~~l~~~~~~ 79 (82)
.+..++-|.++++. .+++||.++|||. ...+...+..|||.+.+|++++ . .+...+.++.+++.++.
T Consensus 255 ~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~gv~~~l~~l~~el~~ 329 (352)
T 3sgz_A 255 VSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHR 329 (352)
T ss_dssp SCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 45677778777654 3469999999994 5788888899999999998854 2 22334455666665543
No 145
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.11 E-value=0.00069 Score=44.64 Aligned_cols=49 Identities=27% Similarity=0.360 Sum_probs=40.4
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCC
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCP 64 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~ 64 (82)
..++.++++++.. ++|+.+.|||+ ++.+.++.++|||.+++|+..+..+
T Consensus 61 ~~~~~i~~i~~~~-~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~p 110 (253)
T 1thf_D 61 TMLELVEKVAEQI-DIPFTVGGGIHDFETASELILRGADKVSINTAAVENP 110 (253)
T ss_dssp HHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHCT
T ss_pred ccHHHHHHHHHhC-CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhCh
Confidence 4566677777764 69999999998 4779999999999999999988644
No 146
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=97.10 E-value=0.00092 Score=46.70 Aligned_cols=45 Identities=24% Similarity=0.483 Sum_probs=39.4
Q ss_pred EEEEcCCCcc-----------cHHHHH-HcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 32 IEVDGGVGPN-----------TIDECA-KAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 32 i~~dGGI~~~-----------ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.+.-||++. +-.+.+ ++|+|.+|+|+.|++++||.++++++++.
T Consensus 245 l~vTPGIrp~~~~~~~g~qv~TP~~Ai~~~GaD~iVVGRpIt~A~dP~~aa~~i~~~ 301 (312)
T 3g3d_A 245 LHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKA 301 (312)
T ss_dssp EEEECSBCSSSEECTTSCEEBCHHHHHHTTCCSEEEESHHHHTSSSHHHHHHHHHHH
T ss_pred EEEcCCcCCCcCCCCcCCcccCHHHHHHhCCCCEEEEChhhcCCCCHHHHHHHHHHH
Confidence 6678899874 367788 99999999999999999999999999874
No 147
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=97.09 E-value=0.0009 Score=47.98 Aligned_cols=37 Identities=30% Similarity=0.462 Sum_probs=33.4
Q ss_pred CCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCC
Q psy11601 27 YPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 27 ~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
++++.|++.|||+++++.++.+.|+|.|.+|+.+.+.
T Consensus 268 ~~~~~I~aSggl~~~~i~~l~~~GvD~~gvGt~l~~~ 304 (398)
T 2i1o_A 268 RSDIKIMVSGGLDENTVKKLREAGAEAFGVGTSISSA 304 (398)
T ss_dssp CTTSEEEEESSCCHHHHHHHHHTTCCEEEECHHHHTC
T ss_pred CCceEEEEeCCCCHHHHHHHHHcCCCEEEeCcccCCC
Confidence 3578999999999999999999999999999987653
No 148
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=97.09 E-value=0.0014 Score=46.44 Aligned_cols=64 Identities=13% Similarity=0.078 Sum_probs=45.5
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC-----CCCHHHHHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN-----CPDRIQAISTLKSSVQK 79 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~-----~~d~~~~~~~l~~~~~~ 79 (82)
...-|.++++..+++||.++|||. ...+...+..|||.+.+|+.++. .+...+.++.+.+.++.
T Consensus 254 t~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~eL~~ 323 (368)
T 3vkj_A 254 TAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFELKA 323 (368)
T ss_dssp HHHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 445567777766679999999976 58888889999999999988652 22233455555555543
No 149
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.04 E-value=0.00055 Score=51.07 Aligned_cols=54 Identities=11% Similarity=0.193 Sum_probs=46.0
Q ss_pred HHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
++-++++++.. ++|+.+.||| +++++.++++.| ||.|.+|++++..+|+...++
T Consensus 269 ~~~~~~i~~~~-~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~ 324 (671)
T 1ps9_A 269 SWVTRKLKGHV-SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQ 324 (671)
T ss_dssp HHHHHHHTTSC-SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHH
T ss_pred HHHHHHHHHhc-CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHH
Confidence 46667777765 6999999999 899999999998 999999999998888866554
No 150
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=97.04 E-value=0.00069 Score=48.08 Aligned_cols=46 Identities=20% Similarity=0.310 Sum_probs=36.4
Q ss_pred HHHHHHHHHh--CCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 17 MPKVKWLREN--YPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 17 ~~ki~~~~~~--~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
++-+.++++. ..++||.++|||+ .+++..++.+|||.+.+|+++..
T Consensus 242 ~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~ 290 (404)
T 1eep_A 242 ITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAG 290 (404)
T ss_dssp HHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhc
Confidence 4444554442 1269999999997 89999999999999999999854
No 151
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.04 E-value=0.0016 Score=43.57 Aligned_cols=57 Identities=21% Similarity=0.365 Sum_probs=43.2
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCC-CHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCP-DRIQAISTL 73 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~-d~~~~~~~l 73 (82)
.++-++++++..+++|+.+.||++ .+++..+ +.+++++++|++++... ++++..+-|
T Consensus 183 d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l-~~~~~gvivg~Al~~g~i~l~ea~~~l 241 (243)
T 4gj1_A 183 NVRLYKLIHEIFPNICIQASGGVASLKDLENL-KGICSGVIVGKALLDGVFSVEEGIRCL 241 (243)
T ss_dssp CHHHHHHHHHHCTTSEEEEESCCCSHHHHHHT-TTTCSEEEECHHHHTTSSCHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHH-HccCchhehHHHHHCCCCCHHHHHHHh
Confidence 456667777776679999999995 6888887 56799999999998643 666655433
No 152
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=97.04 E-value=0.00066 Score=48.05 Aligned_cols=50 Identities=16% Similarity=0.244 Sum_probs=41.4
Q ss_pred HHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 21 KWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 21 ~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
+++++.. +.|+.+.||++++.+.++++.| +|.|.+|++++..+|+...++
T Consensus 272 ~~ik~~~-~iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~~ 322 (362)
T 4ab4_A 272 PLIKEAF-GGPYIVNERFDKASANAALASGKADAVAFGVPFIANPDLPARLA 322 (362)
T ss_dssp HHHHHHH-CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHC-CCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHH
Confidence 4444443 4799999999999999999998 999999999998888766554
No 153
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.00 E-value=0.0012 Score=48.42 Aligned_cols=46 Identities=17% Similarity=0.241 Sum_probs=36.5
Q ss_pred hHHHHHHH---HHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWL---RENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~---~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
.+.-+.++ .+.. ++|+.++||| +.+.+...+++||+.+.+|+++..
T Consensus 344 ~~~~l~~v~~~~~~~-~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~ 393 (511)
T 3usb_A 344 QLTAVYDCATEARKH-GIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAG 393 (511)
T ss_dssp HHHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred cHHHHHHHHHHHHhC-CCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhc
Confidence 44445444 3332 5999999999 889999999999999999999755
No 154
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.98 E-value=0.0012 Score=48.07 Aligned_cols=59 Identities=15% Similarity=0.210 Sum_probs=50.7
Q ss_pred hHHHHHHHHHhCC-CCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYP-TLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 16 ~~~ki~~~~~~~~-~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
.++...++.+..| +.++++-|||+ ++.+..+.++ +|.|.+|++|.+++|+.+.+++|..
T Consensus 194 dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~~d~~~~~~~l~~ 254 (452)
T 1pii_A 194 DLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAHDDLHAAVRRVLL 254 (452)
T ss_dssp CTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHH
Confidence 4677777666543 57899999997 8999999999 9999999999999999999998873
No 155
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.95 E-value=0.0019 Score=47.86 Aligned_cols=56 Identities=7% Similarity=0.082 Sum_probs=45.3
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHH-cCCCEEEEeccccCCC-CHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAK-AGANWIVSGTAVINCP-DRIQAIST 72 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~-~Gad~vv~gs~i~~~~-d~~~~~~~ 72 (82)
.++-++++++.. ++|+.+.||| +++.+..+.+ .|++.+++|++++..+ +..+..+.
T Consensus 484 d~~li~~l~~~~-~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~ 542 (555)
T 1jvn_A 484 DLELIEHVKDAV-KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEY 542 (555)
T ss_dssp CHHHHHHHHHHC-SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHHH
T ss_pred CHHHHHHHHHhC-CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHHH
Confidence 577788888775 6899999999 7899999998 8999999999998755 44444333
No 156
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=96.94 E-value=0.0012 Score=46.85 Aligned_cols=51 Identities=20% Similarity=0.261 Sum_probs=43.0
Q ss_pred HHHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 20 VKWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
++++++.. ++||.+.|||+.+.+.++++.| ||.|.+|++++..+++...++
T Consensus 293 ~~~vr~~~-~iPvi~~G~i~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~ 344 (376)
T 1icp_A 293 LVPMRKAY-KGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFE 344 (376)
T ss_dssp SHHHHHHC-CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHc-CCCEEEeCCCCHHHHHHHHHCCCCcEEeecHHHHhCccHHHHHH
Confidence 45566665 5899999999999999999998 999999999988888776654
No 157
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.88 E-value=0.0015 Score=47.77 Aligned_cols=47 Identities=17% Similarity=0.240 Sum_probs=36.4
Q ss_pred hHHHHHHHHHhC--CCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLRENY--PTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~--~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
.++-+.++.+.. .++|+.++||| +.+.+..++++|||.+.+|+++..
T Consensus 319 ~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~ 368 (496)
T 4fxs_A 319 QITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAG 368 (496)
T ss_dssp HHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhc
Confidence 344444444321 25899999999 589999999999999999999876
No 158
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=96.86 E-value=0.00074 Score=47.89 Aligned_cols=48 Identities=17% Similarity=0.144 Sum_probs=38.2
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccC
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
+..++-+.++++.. +.||.++||| +.+++..++.+|||.+.+|++++.
T Consensus 264 ~~~~~~l~~v~~~~-~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~ 312 (380)
T 1p4c_A 264 ISPMEVLAQSVAKT-GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLY 312 (380)
T ss_dssp CCGGGTHHHHHHHH-CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHH
T ss_pred cCHHHHHHHHHHHc-CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHH
Confidence 34566677776654 3599999999 556999999999999999998653
No 159
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.81 E-value=0.0039 Score=40.86 Aligned_cols=67 Identities=12% Similarity=0.194 Sum_probs=49.1
Q ss_pred CCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCC---CCHHHHHHHHHHHHH
Q psy11601 6 GFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC---PDRIQAISTLKSSVQ 78 (82)
Q Consensus 6 G~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~---~d~~~~~~~l~~~~~ 78 (82)
|-.|+.|.-+.++.+ + . .+.|+...||++++|+.+.+..++.++=+.|.+=.+ .|+. .+++|.+.++
T Consensus 128 gGtG~~fdW~~l~~~--~-~--~~~p~~LAGGL~peNV~~ai~~~p~gVDvsSGvE~~pG~KD~~-ki~~fi~~~r 197 (203)
T 1v5x_A 128 PGSGEAYPRAWAKPL--L-A--TGRRVILAGGIAPENLEEVLALRPYALDLASGVEEAPGVKSAE-KLRALFARLA 197 (203)
T ss_dssp TTSCCCCCGGGGHHH--H-H--TTSCEEECSSCCSTTHHHHHHHCCSEEEESGGGEEETTEECHH-HHHHHHHHHH
T ss_pred CCCCCccCHHHHHhh--h-c--cCCcEEEECCCCHHHHHHHHhcCCCEEEeCCceecCCCCcCHH-HHHHHHHHHH
Confidence 667889988777542 1 1 246899999999999987777799999999998642 3543 5555555554
No 160
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.81 E-value=0.0015 Score=42.94 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=48.2
Q ss_pred CCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHH-cCCCEEEEeccccCC---CCHHHHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAK-AGANWIVSGTAVINC---PDRIQAISTLKSSVQ 78 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~-~Gad~vv~gs~i~~~---~d~~~~~~~l~~~~~ 78 (82)
+|..|+.|.-+.++.+. ..+.|+...||++++|+.+.++ .++.++=+.|.+=.+ .|+. .+++|.+.++
T Consensus 132 ~GGtG~~fdw~~l~~~~-----~~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSGvE~~pG~KD~~-ki~~fi~~~r 203 (205)
T 1nsj_A 132 YGGSGKTFDWSLILPYR-----DRFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEAFPGKKDHD-SIKMFIKNAK 203 (205)
T ss_dssp SSSCCSCCCGGGTGGGG-----GGSSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEEETTEECHH-HHHHHHHHHH
T ss_pred CCCCCCccCHHHHHhhh-----cCCCcEEEECCCCHHHHHHHHHhcCCCEEEECCceecCCCCcCHH-HHHHHHHHHh
Confidence 47789998876664321 1246899999999999987654 699999999998642 3543 5555555443
No 161
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=96.77 E-value=0.0031 Score=43.07 Aligned_cols=45 Identities=20% Similarity=0.365 Sum_probs=38.1
Q ss_pred EEEEcCCCc-----------ccHHHHHHcCCCEEEEeccccC-CCCHHHHHHHHHHH
Q psy11601 32 IEVDGGVGP-----------NTIDECAKAGANWIVSGTAVIN-CPDRIQAISTLKSS 76 (82)
Q Consensus 32 i~~dGGI~~-----------~ni~~~~~~Gad~vv~gs~i~~-~~d~~~~~~~l~~~ 76 (82)
+.+.=||++ .+-.+..++|+|.+|+|+.|++ ++||.++++++++.
T Consensus 198 ~~vTPGIr~~~~g~~~gdQ~rTP~~Ai~~GaD~iVVGRpI~~~a~dP~~aa~~i~~~ 254 (267)
T 3gdm_A 198 LIMTPGVGLDDKGDALGQQYRTVDDVVSTGSDIIIVGRGLFAKGRDAKVEGERYRKA 254 (267)
T ss_dssp EEEECSEECCCTTCTTGGGSEEHHHHHHTTCSEEEECGGGTSTTCCHHHHHHHHHHH
T ss_pred EEECCCcCCCcCCCccccCCCCHHHHHHcCCCEEEEChhhccCCCCHHHHHHHHHHH
Confidence 445667765 3777888999999999999999 99999999998864
No 162
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=96.73 E-value=0.0022 Score=45.31 Aligned_cols=67 Identities=13% Similarity=0.207 Sum_probs=47.2
Q ss_pred CCcchHHHHHHHHHhC-CCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCC------CCHHHHHHHHHHHHH
Q psy11601 12 FMQDMMPKVKWLRENY-PTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINC------PDRIQAISTLKSSVQ 78 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~-~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~------~d~~~~~~~l~~~~~ 78 (82)
+.+..++-+.++++.. .++||.++|||.- +.+...+..|||.+.+|+.++.. +...+.++.+++.++
T Consensus 266 ~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~ 340 (368)
T 2nli_A 266 EAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLT 340 (368)
T ss_dssp SCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 3456778888877653 3699999999964 68888889999999999885432 123344555555544
No 163
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=96.73 E-value=0.0018 Score=45.50 Aligned_cols=55 Identities=9% Similarity=0.152 Sum_probs=45.3
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
.++-++++++.. ++||.+.|||+ ++.+.++++.| +|.|.+|++++..+|+...++
T Consensus 265 ~~~~~~~ir~~~-~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 265 QVKYAETIKKRC-NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp THHHHHHHHHHH-TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred eehHHHHHHHhc-CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 455566777765 58999999995 89999999998 999999999998888766543
No 164
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=96.71 E-value=0.01 Score=41.60 Aligned_cols=44 Identities=20% Similarity=0.326 Sum_probs=35.2
Q ss_pred HHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
..+.+..+.. ++|+.++|||. ...+...+.+|||.+.+|+.++.
T Consensus 213 ~~v~~~~~~~-~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~ 257 (351)
T 2c6q_A 213 MECADAAHGL-KGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAG 257 (351)
T ss_dssp HHHHHHHHHT-TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HHHHHHHhhc-CCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhc
Confidence 3444433332 59999999998 89999999999999999999863
No 165
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.69 E-value=0.0027 Score=41.51 Aligned_cols=45 Identities=16% Similarity=0.323 Sum_probs=38.4
Q ss_pred HHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCC
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
+.++++++.. ++|+.+.|||+ ++.+..++++|||.+++|+..+..
T Consensus 64 ~~i~~i~~~~-~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~ 109 (244)
T 2y88_A 64 ELLAEVVGKL-DVQVELSGGIRDDESLAAALATGCARVNVGTAALEN 109 (244)
T ss_dssp HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHC
T ss_pred HHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhC
Confidence 6778888775 68999999998 478999999999999999987753
No 166
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.68 E-value=0.0028 Score=41.60 Aligned_cols=45 Identities=18% Similarity=0.390 Sum_probs=38.1
Q ss_pred HHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCC
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
+.++++++.. ++|+.+.|||+ ++.+..++++|||.+++|+..+..
T Consensus 65 ~~i~~i~~~~-~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~ 110 (244)
T 1vzw_A 65 ALIAEVAQAM-DIKVELSGGIRDDDTLAAALATGCTRVNLGTAALET 110 (244)
T ss_dssp HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHC
T ss_pred HHHHHHHHhc-CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhC
Confidence 6677787775 69999999998 477999999999999999987743
No 167
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.68 E-value=0.0029 Score=46.86 Aligned_cols=48 Identities=19% Similarity=0.294 Sum_probs=40.1
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCc------------ccHHHHHHcCCCEEEEeccccC
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGP------------NTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~------------~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
+..++.|+++++.. .+||.+.|||+. +++..+.++|||.+++||..+.
T Consensus 313 ~~~~~~i~~i~~~~-~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt~~~~ 372 (555)
T 1jvn_A 313 TPMLEVLKQAAKTV-FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVY 372 (555)
T ss_dssp CHHHHHHHHHTTTC-CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHHHH
T ss_pred chHHHHHHHHHhhC-CCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEECCHHhh
Confidence 34577778877765 689999999987 5699999999999999998764
No 168
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.65 E-value=0.0025 Score=46.12 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=31.1
Q ss_pred CCcEEEEcCC-CcccHHHHHHcCCCEEEEecccc
Q psy11601 29 TLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 29 ~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
++|+.++||| +.+.+..++++|||.+.+|+++.
T Consensus 340 ~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l 373 (494)
T 1vrd_A 340 DVPIIADGGIRYSGDIVKALAAGAESVMVGSIFA 373 (494)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHh
Confidence 6999999999 88999999999999999999985
No 169
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.64 E-value=0.0036 Score=44.38 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=46.0
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC------CCCHHHHHHHHHHHHHH
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN------CPDRIQAISTLKSSVQK 79 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~------~~d~~~~~~~l~~~~~~ 79 (82)
....+-+.+++...+++||.++|||. ...+...+.+|||.+.+|++++. .+...+.++.+++.++.
T Consensus 263 ~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~ 335 (365)
T 3sr7_A 263 QTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRL 335 (365)
T ss_dssp CBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 33455666666555579999999995 67788888999999999998653 12234455556555543
No 170
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=96.62 E-value=0.0074 Score=42.63 Aligned_cols=62 Identities=18% Similarity=0.272 Sum_probs=42.5
Q ss_pred HHHHHHhCCCCcEEEEc-CCCcccHHHHHH------cCCCEEEEeccccCCCCHHHHHHHHHHHHHHhh
Q psy11601 20 VKWLRENYPTLNIEVDG-GVGPNTIDECAK------AGANWIVSGTAVINCPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dG-GI~~~ni~~~~~------~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~~ 81 (82)
++.+|+..|++++++=| |-...+..++.. .|++.+++|+.|+.++||.++++++++.+++.+
T Consensus 268 ~~~iR~~~p~~~iLtPGIGAQggDq~rv~tp~~a~~~g~~~ivVGR~I~~A~dP~~Aa~~i~~ei~~~l 336 (342)
T 3n3m_A 268 MNYIRTYFPNCYILSPGIGAQNGDLHKTLTNGYHKSYEKILINIGRAITKNPYPQKAAQMYYDQINAIL 336 (342)
T ss_dssp HHHHHHHSTTCCEEECCSSTTCCCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEeCCCCcCCCCHHHHHhhhhhhhcCceEEEcChhhhcCCCHHHHHHHHHHHHHHHH
Confidence 44555554566655432 333445555432 578899999999999999999999988876543
No 171
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.62 E-value=0.0037 Score=42.66 Aligned_cols=53 Identities=21% Similarity=0.299 Sum_probs=42.7
Q ss_pred hHHHHHHHHHhCC-CCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHH
Q psy11601 16 MMPKVKWLRENYP-TLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQ 68 (82)
Q Consensus 16 ~~~ki~~~~~~~~-~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~ 68 (82)
.++.-.++....| ++.+++-+|| +++.+..+.++|+|.|.+|+++.+++|+.+
T Consensus 190 dl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d~~~ 244 (258)
T 4a29_A 190 NKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEKIK 244 (258)
T ss_dssp CHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTTHHH
T ss_pred CHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCcHHH
Confidence 3555566666654 4677888999 678999999999999999999999888743
No 172
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.58 E-value=0.0039 Score=43.97 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=30.0
Q ss_pred CcEEEEcCC-CcccHHHHHHcCCCEEEEeccccC
Q psy11601 30 LNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 30 ~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
+||.++||| +.+++..++.+|||.+.+|+++..
T Consensus 278 ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~ 311 (393)
T 2qr6_A 278 VHIIADGSIENSGDVVKAIACGADAVVLGSPLAR 311 (393)
T ss_dssp CEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGG
T ss_pred eEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHc
Confidence 899999999 588999999999999999999643
No 173
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=96.57 E-value=0.0038 Score=41.36 Aligned_cols=45 Identities=24% Similarity=0.294 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEecccc
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
.++.++++++.. ++|+.+.|||+ .+.+..+.++|||.+++|+.++
T Consensus 62 ~~~~i~~i~~~~-~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 62 DTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp CHHHHHHHGGGC-CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred cHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 567788888765 69999999987 4889999999999999999988
No 174
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.56 E-value=0.0039 Score=40.44 Aligned_cols=50 Identities=26% Similarity=0.388 Sum_probs=40.7
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCC
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPD 65 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d 65 (82)
..++.++++++.. ++|+.+.||++ ++.+.++.++|||.+.+++..+..++
T Consensus 64 ~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~~~ 114 (253)
T 1h5y_A 64 TFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRNPQ 114 (253)
T ss_dssp HHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHCTH
T ss_pred ccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhCcH
Confidence 4567778888775 68999999987 57889999999999999998775443
No 175
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=96.56 E-value=0.0036 Score=43.27 Aligned_cols=64 Identities=13% Similarity=0.139 Sum_probs=49.0
Q ss_pred hHHHHHH-HHHhCCCCcEEEEc-CC-CcccHHHHHHc--CCCEEEEeccccCCCCHHHHHHHHHHHHHHh
Q psy11601 16 MMPKVKW-LRENYPTLNIEVDG-GV-GPNTIDECAKA--GANWIVSGTAVINCPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 16 ~~~ki~~-~~~~~~~~~i~~dG-GI-~~~ni~~~~~~--Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~~ 80 (82)
.++++.+ +++.+|++.+..-| || +++.+..+++. |+++|...|++-+.+ +++++.++-+.++..
T Consensus 213 ~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~p-~e~ai~~~~~~fk~~ 281 (286)
T 2p10_A 213 LINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERLP-AEEAIRSQTLAFKAI 281 (286)
T ss_dssp HHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH-HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcCC-HHHHHHHHHHHHHhc
Confidence 3333333 34457777666666 66 68899999999 999999999999887 999998888877653
No 176
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=96.53 E-value=0.0034 Score=41.20 Aligned_cols=50 Identities=18% Similarity=0.395 Sum_probs=40.7
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCCCCH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINCPDR 66 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~~d~ 66 (82)
..++.+++++ .. ++|+.+.|||+. +.+..+.++|||.+++|+..+..++.
T Consensus 61 ~~~~~i~~i~-~~-~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~ 111 (241)
T 1qo2_A 61 ENLPVLEKLS-EF-AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSF 111 (241)
T ss_dssp TTHHHHHHGG-GG-GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTH
T ss_pred hhHHHHHHHH-hc-CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChHH
Confidence 4466777776 43 689999999985 77889999999999999998876654
No 177
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.48 E-value=0.0082 Score=41.69 Aligned_cols=46 Identities=17% Similarity=0.422 Sum_probs=39.4
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
.++-+.++++.. ++||.++|||. ...+...+..|||.+.+|++++.
T Consensus 198 ~~~~l~~v~~~~-~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~ 244 (336)
T 1ypf_A 198 QLAALRWCAKAA-SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAG 244 (336)
T ss_dssp HHHHHHHHHHTC-SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTT
T ss_pred HHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhc
Confidence 466777777765 79999999996 78899999999999999999874
No 178
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=96.43 E-value=0.0049 Score=43.94 Aligned_cols=67 Identities=15% Similarity=0.199 Sum_probs=47.2
Q ss_pred CCcchHHHHHHHHHhC-CCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCC------CCHHHHHHHHHHHHH
Q psy11601 12 FMQDMMPKVKWLRENY-PTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINC------PDRIQAISTLKSSVQ 78 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~-~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~------~d~~~~~~~l~~~~~ 78 (82)
+.+..++-+.++++.. .++||.++|||.- +.+...+..|||.+.+|++++.. +...+.++.+++.++
T Consensus 289 ~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~~g~~gv~~~l~~l~~el~ 363 (392)
T 2nzl_A 289 GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFR 363 (392)
T ss_dssp TCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 3466777788877643 3699999999964 78888889999999999886532 123344455555444
No 179
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=96.31 E-value=0.014 Score=39.11 Aligned_cols=56 Identities=18% Similarity=0.219 Sum_probs=38.5
Q ss_pred CcchHHHHHHHHHh-CCCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHH
Q psy11601 13 MQDMMPKVKWLREN-YPTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQ 68 (82)
Q Consensus 13 ~~~~~~ki~~~~~~-~~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~ 68 (82)
..+.++.|+++.+. ..++.|.+=|||+.+|+..+. ..|++-|=....+..+.||.+
T Consensus 161 a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~~Ni~~l~~~tGv~e~H~s~i~~~~~~~~~ 218 (224)
T 2bdq_A 161 IIENIKHIKALVEYANNRIEIMVGGGVTAENYQYICQETGVKQAHGTRITQMAGDPLE 218 (224)
T ss_dssp GGGGHHHHHHHHHHHTTSSEEEECSSCCTTTHHHHHHHHTCCEEEETTCC--------
T ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCHHHHHHHHHhhCCCEEccccccCCCCCcch
Confidence 47788888887664 346889999999999999998 689998875444555666643
No 180
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=96.15 E-value=0.024 Score=37.70 Aligned_cols=69 Identities=13% Similarity=0.171 Sum_probs=42.4
Q ss_pred CCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHH-cCCCEEEEeccccC--CCCHHHHHHHHHHHHHHh
Q psy11601 5 PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAK-AGANWIVSGTAVIN--CPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~-~Gad~vv~gs~i~~--~~d~~~~~~~l~~~~~~~ 80 (82)
+|..|+.|.-+.++.+ .. +.|+...||++++|+.+.++ .++.+|=+.|.+=. -.|+ +.+++|.+..++.
T Consensus 155 ~GGtG~~fDW~~~~~~---~~---~~p~iLAGGL~peNV~~Ai~~~~P~gVDVsSGVEs~G~KD~-~KI~~Fi~~vr~v 226 (228)
T 4aaj_A 155 GAGSGKLHDLRVSSLV---AR---KIPVIVAGGLNAENVEEVIKVVKPYGVDVSSGVEKYGIKDP-KLVEEFVRRAKNV 226 (228)
T ss_dssp -------CCCHHHHHH---HH---HSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEETTEECH-HHHHHHHHHHHHC
T ss_pred CCCCcCcCChHHHHHh---hh---cCCeEEECCCCHHHHHHHHHHhCCCEEEeCCCCCCCCCcCH-HHHHHHHHHHhcc
Confidence 4667888876544433 33 25899999999999998765 78888888888743 2354 3566666665543
No 181
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.12 E-value=0.0063 Score=45.97 Aligned_cols=54 Identities=22% Similarity=0.213 Sum_probs=45.3
Q ss_pred HHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
++-++++++.. ++|+.+.||| +++.+.++++.| ||.|.+|++++..+|+...++
T Consensus 280 ~~~~~~i~~~~-~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~ 335 (729)
T 1o94_A 280 IPWVKLVKQVS-KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVE 335 (729)
T ss_dssp HHHHHHHHTTC-SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHHC-CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHH
Confidence 45566777765 6999999999 599999999998 999999999988888766553
No 182
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=96.10 E-value=0.0095 Score=42.82 Aligned_cols=51 Identities=14% Similarity=0.337 Sum_probs=41.0
Q ss_pred HHHHHHhCC-CCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHH
Q psy11601 20 VKWLRENYP-TLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 20 i~~~~~~~~-~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
++++++... ++||.+.||| +++.+.++++. +|.|.+|++++..+|+...++
T Consensus 308 a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~IanPdlv~ki~ 360 (419)
T 3l5a_A 308 NQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVTEPDFVHKLA 360 (419)
T ss_dssp HHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHHCTTHHHHHH
T ss_pred HHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHHCcHHHHHHH
Confidence 444554432 5899999998 79999999999 999999999988888766554
No 183
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.08 E-value=0.011 Score=42.52 Aligned_cols=47 Identities=19% Similarity=0.188 Sum_probs=35.9
Q ss_pred hHHHHHHHHHh--CCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLREN--YPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~--~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
.++-++++... ..++|+.++|||+ .+.+..++++||+.+++|+++..
T Consensus 321 ~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~ 370 (491)
T 1zfj_A 321 QVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAG 370 (491)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred cHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhC
Confidence 34445554431 1268999999985 77899999999999999999874
No 184
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=95.94 E-value=0.018 Score=39.06 Aligned_cols=62 Identities=13% Similarity=0.201 Sum_probs=46.6
Q ss_pred CCCCCcchHHHHHH-HHHh---------CCCCcEEEEcCCCcccHHHHHHc-CCCEEEEeccccCCCCHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LREN---------YPTLNIEVDGGVGPNTIDECAKA-GANWIVSGTAVINCPDRIQAI 70 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~---------~~~~~i~~dGGI~~~ni~~~~~~-Gad~vv~gs~i~~~~d~~~~~ 70 (82)
|+.-.|+..+++.. +|+. ...++|.-=|+++++|+.++.+. ++|++-+|++.++++|+.+-+
T Consensus 174 G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~ii 246 (250)
T 1yya_A 174 GKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELESFLALL 246 (250)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHhChHHHHHHH
Confidence 44455555555444 3432 23689999999999999999988 999999999999877766544
No 185
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=95.75 E-value=0.021 Score=38.79 Aligned_cols=43 Identities=19% Similarity=0.328 Sum_probs=37.7
Q ss_pred CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHHH
Q psy11601 28 PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQAI 70 (82)
Q Consensus 28 ~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~ 70 (82)
..++|.-=|+++++|+.++. +.++|++-+|++.++++|+..-+
T Consensus 203 ~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii 246 (252)
T 2btm_A 203 EAIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLEPASFLQLV 246 (252)
T ss_dssp TTSEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHH
T ss_pred CceeEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhChHHHHHHH
Confidence 46899999999999999999 89999999999999877666544
No 186
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=95.75 E-value=0.035 Score=38.92 Aligned_cols=57 Identities=16% Similarity=0.225 Sum_probs=44.0
Q ss_pred CCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 11 KFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 11 ~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
.+.+...+.++ +.. ..|+.+-|+.+++.+.++++.| ||.|.+|+.+...+|+..+++
T Consensus 272 ~~~~~~a~~ik---~~~-~~~v~~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~k~~ 329 (358)
T 4a3u_A 272 TDQPKLSPEIR---KVF-KPPLVLNQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFF 329 (358)
T ss_dssp CSSCCCHHHHH---HHC-CSCEEEESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHHHHH
T ss_pred cccHHHHHHHH---Hhc-CCcEEEeCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHHHHH
Confidence 33444444444 443 4678899999999999999999 899999999998899876664
No 187
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=95.72 E-value=0.027 Score=38.36 Aligned_cols=50 Identities=16% Similarity=0.085 Sum_probs=40.5
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
|+.--.+.++.|+++.+...++.|.+=|||+.+|++.+...|++-|=.++
T Consensus 150 ~~~~a~~g~~~L~~Lv~~a~~i~Im~GgGv~~~Ni~~l~~tGv~e~H~Sa 199 (256)
T 1twd_A 150 QKSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSA 199 (256)
T ss_dssp TSSSTTTTHHHHHHHHTSSSCCEEEEESSCCTTTHHHHHHHTCSEEEECC
T ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEecCCcCHHHHHHHHHcCCCeEeECC
Confidence 34445778888988876533788999999999999999999999988653
No 188
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=95.67 E-value=0.011 Score=40.16 Aligned_cols=64 Identities=13% Similarity=0.192 Sum_probs=48.2
Q ss_pred CCCCCcchHHHHHH-HHHh--------CCCCcEEEEcCCCcccHHHHHHc-CCCEEEEeccccCCCCHHHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LREN--------YPTLNIEVDGGVGPNTIDECAKA-GANWIVSGTAVINCPDRIQAIST 72 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~--------~~~~~i~~dGGI~~~ni~~~~~~-Gad~vv~gs~i~~~~d~~~~~~~ 72 (82)
|+.-.|+..+++.. +|+. ...++|.-=|+++++|+.++.+. ++|++-+|++.++++|+..-++.
T Consensus 177 G~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~~ 250 (256)
T 1aw2_A 177 GKAATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALDAKSFAAIAKA 250 (256)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCCCTTTHHHHTTSTTCCEEEESGGGGCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeecHHHhChHHHHHHHHH
Confidence 45556666666544 4432 12478999999999999999988 99999999999988777665543
No 189
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=95.65 E-value=0.027 Score=41.41 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=43.9
Q ss_pred cchHHHHHHHHHhC------CCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccCC------CCHHHHHHHHHHHHH
Q psy11601 14 QDMMPKVKWLRENY------PTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVINC------PDRIQAISTLKSSVQ 78 (82)
Q Consensus 14 ~~~~~ki~~~~~~~------~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~~------~d~~~~~~~l~~~~~ 78 (82)
+..++-+.++++.. .++||.++|||.- ..+...+..|||.+.+|++++.. +...+.++.+++.++
T Consensus 382 ~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~~~~~G~~gv~~~l~~l~~el~ 459 (511)
T 1kbi_A 382 RAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIE 459 (511)
T ss_dssp CCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 44556666655432 4699999999974 67888889999999999885431 123344455555544
No 190
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=95.63 E-value=0.012 Score=42.07 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=32.3
Q ss_pred CCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCC
Q psy11601 27 YPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 27 ~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
++++.|++.|||+++++.++.+. +|.|.+|+.+.+.
T Consensus 266 ~~~~~I~aSggl~~~~i~~l~~~-vD~~gvGt~l~~~ 301 (395)
T 2i14_A 266 YDWVKIFVSGGLDEEKIKEIVDV-VDAFGVGGAIASA 301 (395)
T ss_dssp CCSCEEEEESSCCHHHHHTTGGG-CSEEEECHHHHTC
T ss_pred CCceEEEEECCCCHHHHHHHHHh-CCEEEeCcccCCC
Confidence 35789999999999999999999 9999999987653
No 191
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=95.55 E-value=0.033 Score=37.70 Aligned_cols=62 Identities=18% Similarity=0.217 Sum_probs=46.3
Q ss_pred CCCCCcchHHHHHH-HHHh----C-----CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LREN----Y-----PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~----~-----~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
|+.-.|+..+++.. +|+. + ..++|.-=|+++++|+.++. +.++|++-+|++.++ +|+.+-++
T Consensus 175 G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 247 (250)
T 2j27_A 175 GKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLK-PEFVDIIK 247 (250)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeeehHHHH-HHHHHHHH
Confidence 44455555555444 3332 2 24789999999999999999 899999999999998 88875543
No 192
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=95.53 E-value=0.034 Score=37.59 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=46.6
Q ss_pred CCCCCcchHHHHHH-HHHh----C-----CCCcEEEEcCCCcccHHHHHH-cCCCEEEEeccccCCCCHHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LREN----Y-----PTLNIEVDGGVGPNTIDECAK-AGANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~----~-----~~~~i~~dGGI~~~ni~~~~~-~Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
|+.-.|+..+++.. +|+. + ..++|.-=|+++++|+.++.+ .++|++-+|++.++ +|+..-++
T Consensus 173 G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 245 (248)
T 1o5x_A 173 GKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIK 245 (248)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTTTHHHHHTSTTCCEEEECGGGGS-TTHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHHH-HHHHHHHH
Confidence 44555655555443 3332 2 248899999999999999998 99999999999998 88876553
No 193
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=95.50 E-value=0.022 Score=39.73 Aligned_cols=58 Identities=21% Similarity=0.268 Sum_probs=44.5
Q ss_pred HHHHHHhCCCCcEEEEcCCCcc-------cHHHHHH-cCCCEEEEeccccC--CCCHHHHHHHHHHHHH
Q psy11601 20 VKWLRENYPTLNIEVDGGVGPN-------TIDECAK-AGANWIVSGTAVIN--CPDRIQAISTLKSSVQ 78 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dGGI~~~-------ni~~~~~-~Gad~vv~gs~i~~--~~d~~~~~~~l~~~~~ 78 (82)
++++.+-. .+|+++.||=..+ .+...++ .|+.++++|+.||+ .+||...++.+...+.
T Consensus 229 f~~Vv~a~-~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~~v~al~~iVH 296 (307)
T 3fok_A 229 MERVMEST-TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAAVDTAARLVH 296 (307)
T ss_dssp HHHHGGGC-SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHHHHHHHHHHHC
T ss_pred HHHHHHhC-CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHHHHHHHHHHHH
Confidence 34444444 4899999997642 2445567 79999999999999 8999999999988763
No 194
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=95.50 E-value=0.018 Score=38.63 Aligned_cols=62 Identities=11% Similarity=0.056 Sum_probs=47.6
Q ss_pred CCCCCcchHHHHHH-HHHhC-CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LRENY-PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQAI 70 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~~-~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~ 70 (82)
|+.-.|+..+++.. +|+.. ..++|.-=|+++++|+.++. +.++|++-+|++.++++|+.+-+
T Consensus 166 G~~At~e~a~ev~~~IR~~l~~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsl~a~~f~~ii 230 (233)
T 2jgq_A 166 KKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELENFKTII 230 (233)
T ss_dssp --CCCHHHHHHHHHHHHHHSCTTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCcEEEcCCcChhhHHHHhcCCCCCeeEecHHHhChHHHHHHH
Confidence 45556777777665 66654 57899999999999999865 67999999999999877665443
No 195
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=95.46 E-value=0.085 Score=35.85 Aligned_cols=62 Identities=15% Similarity=0.160 Sum_probs=45.7
Q ss_pred CCCCCcchHHHHHH-HHHh---------CCCCcEEEEcCCCcccHHHHHHc-CCCEEEEeccccCCCCHHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LREN---------YPTLNIEVDGGVGPNTIDECAKA-GANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~---------~~~~~i~~dGGI~~~ni~~~~~~-Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
|..-.|+..+++.. +|+. ...++|.-=|+++++|+.++.+. ++|++-+|++.++++ ..+-++
T Consensus 178 G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~-F~~Ii~ 250 (257)
T 2yc6_A 178 GVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNIDGFLVGGASLKPE-FMTMID 250 (257)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSTH-HHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCccCHHHHHHHHcCCCCCeeeecHHHHHHH-HHHHHH
Confidence 44445555555443 3332 23689999999999999999988 999999999999876 654443
No 196
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.27 E-value=0.011 Score=44.35 Aligned_cols=53 Identities=23% Similarity=0.136 Sum_probs=43.6
Q ss_pred HHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEeccccCCCCHHHHHH
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~ 71 (82)
+-++++++.. ++|+.+.|||+ ++.+.++++.| +|.|.+|++++..+|+...++
T Consensus 284 ~~~~~i~~~~-~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~ 338 (690)
T 3k30_A 284 EFVAGLKKLT-TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIR 338 (690)
T ss_dssp HHHTTSGGGC-SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHHHc-CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHH
Confidence 4455566665 68999999996 89999999988 999999999998888876554
No 197
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=95.23 E-value=0.023 Score=38.59 Aligned_cols=64 Identities=14% Similarity=0.166 Sum_probs=47.6
Q ss_pred CCCCCcchHHHHHH-HHHh--------CCCCcEEEEcCCCcccHHHHHH-cCCCEEEEeccccCCCCHHHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LREN--------YPTLNIEVDGGVGPNTIDECAK-AGANWIVSGTAVINCPDRIQAIST 72 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~--------~~~~~i~~dGGI~~~ni~~~~~-~Gad~vv~gs~i~~~~d~~~~~~~ 72 (82)
|+.-.|+..+++.. +|+. ...++|.-=|+++++|+.++.+ .++|++-+|++.++++|+..-++.
T Consensus 175 G~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~~ 248 (255)
T 1tre_A 175 GKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKA 248 (255)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhChHHHHHHHHH
Confidence 44445555555444 3332 1257899999999999999998 999999999999988877766543
No 198
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.80 E-value=0.041 Score=38.57 Aligned_cols=44 Identities=25% Similarity=0.349 Sum_probs=37.8
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
+..++.|+++++..+++|+.+-+..+.+.+..+.++|||.|+++
T Consensus 146 ~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 146 EHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEEC
Confidence 45778899999987678888877889999999999999999775
No 199
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=94.79 E-value=0.056 Score=39.36 Aligned_cols=66 Identities=21% Similarity=0.312 Sum_probs=48.2
Q ss_pred CCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCC---CCHHHHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC---PDRIQAISTLKSSVQ 78 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~---~d~~~~~~~l~~~~~ 78 (82)
.|..|+.|.-+.+.. . .+.|+...||++++|+.+..+.++.++=+.|.+=.+ .|+. .++++.+.++
T Consensus 382 ~GGtG~~fdW~~l~~------~-~~~p~iLAGGL~p~NV~~ai~~~p~gvDvsSGVE~~pG~KD~~-ki~~f~~~~r 450 (452)
T 1pii_A 382 QGGSGQRFDWSLLNG------Q-SLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDAR-LLASVFQTLR 450 (452)
T ss_dssp SCCSSCCCCGGGGTT------S-CCTTEEEESSCCTTTHHHHHTTCCSEEEECGGGEEETTEECHH-HHHHHHHHHH
T ss_pred CCCCCCccCHHHhhc------c-cCCcEEEEcCCCHHHHHHHHhcCCCEEEeCCceeCCCCCCCHH-HHHHHHHHHh
Confidence 477888887765421 1 257899999999999988878999999999998532 3543 5566555544
No 200
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=94.72 E-value=0.04 Score=36.46 Aligned_cols=47 Identities=26% Similarity=0.292 Sum_probs=31.9
Q ss_pred hHHHHHHHHHh-CCCCcEEEEcCCC-cccHHHHHHcCCC--EEEEeccccC
Q psy11601 16 MMPKVKWLREN-YPTLNIEVDGGVG-PNTIDECAKAGAN--WIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~-~~~~~i~~dGGI~-~~ni~~~~~~Gad--~vv~gs~i~~ 62 (82)
.++.++.+++. ..+++|.+.|||+ .+.+.++.++|++ +..+|..|+.
T Consensus 162 t~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~~I~~ 212 (220)
T 1ub3_A 162 SLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRLGTSSGVALVA 212 (220)
T ss_dssp CHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHHHC
T ss_pred CHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCcccchhHHHHHHH
Confidence 33444444442 3579999999999 4667888999999 4444455664
No 201
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=94.69 E-value=0.018 Score=42.29 Aligned_cols=35 Identities=23% Similarity=0.168 Sum_probs=29.4
Q ss_pred CCCcEEEEcCCCcccHHHHHHcCCCEEEEe--ccccC
Q psy11601 28 PTLNIEVDGGVGPNTIDECAKAGANWIVSG--TAVIN 62 (82)
Q Consensus 28 ~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g--s~i~~ 62 (82)
+++.|++.|||+++++.++.+.|++.++.| +.|..
T Consensus 285 ~~~kI~aSggld~~~i~~l~~~G~~~~sfGvGT~Lt~ 321 (494)
T 2f7f_A 285 TEAKIYASNDLDENTILNLKMQKSKIDVWGVGTKLIT 321 (494)
T ss_dssp TTCEEEECSSCCHHHHHHHHHTTCCCCEEEECHHHHT
T ss_pred CceEEEEECCCCHHHHHHHHHcCCCEEEEecCccccc
Confidence 468899999999999999999998766666 56654
No 202
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=94.61 E-value=0.19 Score=33.69 Aligned_cols=53 Identities=17% Similarity=0.059 Sum_probs=41.5
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcc-cHHHHHHcCCCEEEEeccccCCCCHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPN-TIDECAKAGANWIVSGTAVINCPDRIQA 69 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~-ni~~~~~~Gad~vv~gs~i~~~~d~~~~ 69 (82)
...+.++.+++.. ++|+..-++|..+ .+.++..+|||++.++...+. ++..+.
T Consensus 93 G~~~~l~~i~~~v-~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l 146 (254)
T 1vc4_A 93 GSLLDLKRVREAV-DLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG-ELTGAY 146 (254)
T ss_dssp CCHHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHHH
T ss_pred cCHHHHHHHHHhc-CCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH-HHHHHH
Confidence 3567788888775 6899887777666 899999999999999988776 544433
No 203
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=94.59 E-value=0.11 Score=34.09 Aligned_cols=43 Identities=19% Similarity=0.367 Sum_probs=32.1
Q ss_pred hHHHHHHHHHh-CCCCcEEEEcCCC-cccHHHHHHcCCCEEEEec
Q psy11601 16 MMPKVKWLREN-YPTLNIEVDGGVG-PNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 16 ~~~ki~~~~~~-~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs 58 (82)
.++-++++++. ..++||.+.|||+ .+.+.+++++|||.+-+++
T Consensus 161 ~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 161 TLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSS 205 (225)
T ss_dssp CHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHcc
Confidence 45566666654 3469999999997 7888899999999654443
No 204
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=94.56 E-value=0.12 Score=35.62 Aligned_cols=59 Identities=15% Similarity=0.320 Sum_probs=41.6
Q ss_pred CCCCCCCCCCcchHHHHHHHHHh-CCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEecc--ccC
Q psy11601 4 EPGFGGQKFMQDMMPKVKWLREN-YPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTA--VIN 62 (82)
Q Consensus 4 ~pG~~gq~~~~~~~~ki~~~~~~-~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~--i~~ 62 (82)
..||....-.++.++-+++..+. .++++|-+.|||+- +.+..++++||+.+-..+. |++
T Consensus 208 STGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~g~~I~~ 270 (288)
T 3oa3_A 208 STGFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASAGVKIVN 270 (288)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESCHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhhHHHHHH
Confidence 36776544455566666666543 35799999999984 7888999999996655543 553
No 205
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.32 E-value=0.081 Score=39.55 Aligned_cols=42 Identities=21% Similarity=0.378 Sum_probs=33.1
Q ss_pred HHHHHHhCCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEeccccC
Q psy11601 20 VKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
..++.+.. .+||.+||||+- .++...+.+|||.+.+||.+-+
T Consensus 376 ~a~~a~~~-~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAG 418 (556)
T 4af0_A 376 VAEFASRF-GIPCIADGGIGNIGHIAKALALGASAVMMGGLLAG 418 (556)
T ss_dssp HHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HHHHHHHc-CCCEEecCCcCcchHHHHHhhcCCCEEEEchhhcc
Confidence 34444433 589999999975 5788888999999999998876
No 206
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=94.28 E-value=0.18 Score=33.52 Aligned_cols=47 Identities=15% Similarity=0.276 Sum_probs=33.5
Q ss_pred CcchHHHHHHH-HHhCCCCcEEEEcCCC-cccHHHHHHc---CCC----EEEEecc
Q psy11601 13 MQDMMPKVKWL-RENYPTLNIEVDGGVG-PNTIDECAKA---GAN----WIVSGTA 59 (82)
Q Consensus 13 ~~~~~~ki~~~-~~~~~~~~i~~dGGI~-~~ni~~~~~~---Gad----~vv~gs~ 59 (82)
.++..+-+++. +...++++|-+.|||+ .+.+..+.++ |++ .+-..|.
T Consensus 167 t~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~~ 222 (226)
T 1vcv_A 167 TPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTSTP 222 (226)
T ss_dssp CHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEESCG
T ss_pred CHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecCch
Confidence 33344555553 2235679999999999 7888899999 999 7755543
No 207
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=94.17 E-value=0.083 Score=34.50 Aligned_cols=43 Identities=21% Similarity=0.143 Sum_probs=35.0
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCc-------ccHHHHHHcCCCEEEEecc
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGP-------NTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~-------~ni~~~~~~Gad~vv~gs~ 59 (82)
.++-++++++.. ++|+.+-+++++ +.++.+.++|||+++++..
T Consensus 68 ~~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~ 117 (248)
T 1geq_A 68 AFWIVKEFRRHS-STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDL 117 (248)
T ss_dssp HHHHHHHHHTTC-CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTC
T ss_pred HHHHHHHHHhhC-CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCC
Confidence 466777888764 578888887785 7889999999999999854
No 208
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=94.09 E-value=0.42 Score=30.40 Aligned_cols=61 Identities=18% Similarity=0.109 Sum_probs=45.3
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCc--ccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGP--NTIDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~--~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
+.+..++.++++++.. +.++.+++.++. +.++.+.++|+|++.+...-. +.+.+.++.+++
T Consensus 45 ~~~~g~~~i~~i~~~~-~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~--~~~~~~~~~~~~ 107 (220)
T 2fli_A 45 NISFGADVVASMRKHS-KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTEST--RHIHGALQKIKA 107 (220)
T ss_dssp CBCBCHHHHHHHHTTC-CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGC--SCHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHhC-CCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCcc--ccHHHHHHHHHH
Confidence 3345577888888775 578999999885 368999999999999986543 566666666553
No 209
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=94.05 E-value=0.096 Score=37.79 Aligned_cols=46 Identities=20% Similarity=0.411 Sum_probs=39.8
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
.+..++.|+++++..+++|+.+-++.+.+.+..+.++|+|.++++.
T Consensus 262 ~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 262 SRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp SHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECS
T ss_pred hHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcC
Confidence 3457888999998876789988889999999999999999999853
No 210
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=94.00 E-value=0.079 Score=35.92 Aligned_cols=61 Identities=21% Similarity=0.304 Sum_probs=44.1
Q ss_pred CCCCCcchHHH----HHH-HHHhC-----CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHH
Q psy11601 9 GQKFMQDMMPK----VKW-LRENY-----PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQA 69 (82)
Q Consensus 9 gq~~~~~~~~k----i~~-~~~~~-----~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~ 69 (82)
|..-.|+..+. ||+ +.+.+ .+++|.-=|+++++|+.++. +.++|++-+|++-+++++..+-
T Consensus 178 G~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~~~F~~I 249 (254)
T 3m9y_A 178 GKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQL 249 (254)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHHcCCCCCeEEeeHHhhCHHHHHHH
Confidence 44455555555 444 22222 36899999999999999998 8999999999998876655443
No 211
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.86 E-value=0.11 Score=38.03 Aligned_cols=46 Identities=17% Similarity=0.272 Sum_probs=39.0
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
..+..++.++++++..|++|+.+-...+.+.+..+.++|||.++++
T Consensus 255 ~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 255 HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp TSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred cchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEEC
Confidence 3456778889999888788888866789999999999999999986
No 212
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=93.82 E-value=0.073 Score=34.74 Aligned_cols=43 Identities=9% Similarity=0.219 Sum_probs=34.1
Q ss_pred HHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEecc-ccCC
Q psy11601 20 VKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTA-VINC 63 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~-i~~~ 63 (82)
|+++++.. ++|+.+-|+|+ .+.+.+.+++||+.++.+.. +|+.
T Consensus 142 I~~i~~~~-~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~ 186 (192)
T 3kts_A 142 VQKMTQKL-HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEG 186 (192)
T ss_dssp HHHHHHHH-CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGTT
T ss_pred HHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCc
Confidence 45555554 68999999996 57788999999999999954 8864
No 213
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=93.59 E-value=0.024 Score=38.55 Aligned_cols=42 Identities=12% Similarity=0.190 Sum_probs=37.0
Q ss_pred CCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCC--CHHHHH
Q psy11601 29 TLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCP--DRIQAI 70 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~--d~~~~~ 70 (82)
.++|.-=|+++++|+.++. +.++|++-+|++.++++ |+..-+
T Consensus 206 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASLka~~~~F~~ii 250 (255)
T 1b9b_A 206 SIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLKESFIELARIM 250 (255)
T ss_dssp HSEEEEESSCCHHHHTTTSSSTTCCEEEESGGGTSTHHHHHHHHH
T ss_pred cceEEEcCcCCHHHHHHHHcCCCCCeeEeehHhhcCccccHHHHH
Confidence 4789999999999999998 89999999999999887 766544
No 214
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=93.57 E-value=0.065 Score=39.06 Aligned_cols=34 Identities=21% Similarity=0.339 Sum_probs=29.7
Q ss_pred CCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 29 TLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 29 ~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
++|+.++|||. ...+...+++||+.+.+|+.+..
T Consensus 352 ~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~ 386 (503)
T 1me8_A 352 YIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFAR 386 (503)
T ss_dssp ECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 58999999997 66788888999999999999854
No 215
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=93.46 E-value=0.14 Score=37.30 Aligned_cols=46 Identities=17% Similarity=0.445 Sum_probs=38.6
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
..+..++.++++++..|++|+.+-...+.+.+..+.++|||.+++|
T Consensus 253 ~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 253 HSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp SBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred cchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEEC
Confidence 4556778899999887778887755789999999999999999985
No 216
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=93.40 E-value=0.13 Score=37.27 Aligned_cols=46 Identities=24% Similarity=0.360 Sum_probs=34.6
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
.+..++++.+.. ++||.++|||. ...+...+.+|||.+.+|+.+..
T Consensus 316 ~l~~~~~~~~~~-~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~ 362 (486)
T 2cu0_A 316 AVAMVADRAQEY-GLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAG 362 (486)
T ss_dssp HHHHHHHHHHHH-TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred HHHHHHHHHHHc-CCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhc
Confidence 444555554443 58999999986 45677777899999999999765
No 217
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.38 E-value=0.19 Score=31.93 Aligned_cols=47 Identities=17% Similarity=0.277 Sum_probs=34.7
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEcCCC--ccc-HHHHHHcCCCEEEEecc
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDGGVG--PNT-IDECAKAGANWIVSGTA 59 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dGGI~--~~n-i~~~~~~Gad~vv~gs~ 59 (82)
.+..++-++++|+..+++|+.++=-+. .+. ++.+.++|+|.+++...
T Consensus 37 ~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~ 86 (211)
T 3f4w_A 37 IREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGV 86 (211)
T ss_dssp HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETT
T ss_pred HhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCC
Confidence 455677788888876678887654443 244 88999999999999754
No 218
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=93.36 E-value=0.056 Score=38.85 Aligned_cols=51 Identities=8% Similarity=0.019 Sum_probs=38.0
Q ss_pred HHHHHHhCCCCcEEEEcCCCccc-HHHHHH----cCCCEEEEeccccCCCCHHHHHH
Q psy11601 20 VKWLRENYPTLNIEVDGGVGPNT-IDECAK----AGANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dGGI~~~n-i~~~~~----~Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
++.+++.. +.|+.+.|||+... ..+++. .++|.|.+|++++..+|+...++
T Consensus 305 ~~~ir~~~-~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~ 360 (407)
T 3tjl_A 305 NEFVSKIW-KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKLR 360 (407)
T ss_dssp SHHHHHHC-CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHCTTHHHHHH
T ss_pred HHHHHHHh-CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhCchHHHHHH
Confidence 34455554 47999999999766 555444 46999999999988889876654
No 219
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=93.30 E-value=0.066 Score=38.03 Aligned_cols=48 Identities=17% Similarity=0.183 Sum_probs=36.9
Q ss_pred HHhCCCCcEEEEcCCCc--ccHHHHHHcCCCEEEEeccccCCCCHHHHHHH
Q psy11601 24 RENYPTLNIEVDGGVGP--NTIDECAKAGANWIVSGTAVINCPDRIQAIST 72 (82)
Q Consensus 24 ~~~~~~~~i~~dGGI~~--~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~ 72 (82)
++.. +.|+.+.||++. +-...+.+-++|.|.+|+.+...+|+.+++++
T Consensus 314 r~~~-~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~~ 363 (400)
T 4gbu_A 314 YSIW-KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEK 363 (400)
T ss_dssp HHHC-CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHH
T ss_pred HHHh-CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHCcHHHHHHHc
Confidence 4443 579999999963 44556777789999999999988898776653
No 220
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.27 E-value=0.14 Score=36.16 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=36.7
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
.+..++.|+++++..|++++.+-...+.+.+..+.++|||.+++|
T Consensus 133 ~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 133 SEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp SHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEe
Confidence 355677889999887777776644678999999999999999994
No 221
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=93.22 E-value=0.15 Score=34.52 Aligned_cols=46 Identities=20% Similarity=0.249 Sum_probs=35.6
Q ss_pred hHHHHHHHHHhCCCCcEE-EEcCCCcccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLRENYPTLNIE-VDGGVGPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~-~dGGI~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
.++.|+++++.. ++|+. -|..|+...+.+...+|||+|.++.+...
T Consensus 101 s~~~l~~ir~~v-~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~ 147 (272)
T 3qja_A 101 SLDDLDAVRASV-SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALE 147 (272)
T ss_dssp HHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSC
T ss_pred CHHHHHHHHHhC-CCCEEECccccCHHHHHHHHHcCCCEEEEecccCC
Confidence 567788888765 46654 45667777899999999999999977664
No 222
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.94 E-value=0.51 Score=31.08 Aligned_cols=60 Identities=13% Similarity=0.083 Sum_probs=41.4
Q ss_pred chHHHHHHHHHhCCCCcEEE-----EcC----C--CcccHHHHHHcCCCEEEEeccccC-CCCHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEV-----DGG----V--GPNTIDECAKAGANWIVSGTAVIN-CPDRIQAISTLKS 75 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~-----dGG----I--~~~ni~~~~~~Gad~vv~gs~i~~-~~d~~~~~~~l~~ 75 (82)
...+.|+++++.. ++|+.. .|| | +.+.+.++.++|||.+++++.... ++.+.+.++.+++
T Consensus 56 ~~~~~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~ 127 (232)
T 3igs_A 56 EGIDNLRMTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHH 127 (232)
T ss_dssp ESHHHHHHHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHH
Confidence 4577888888876 578642 144 2 234789999999999999987653 4556666666554
No 223
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=92.81 E-value=0.17 Score=34.93 Aligned_cols=45 Identities=18% Similarity=0.354 Sum_probs=35.0
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEc-CCCcccHHHHHHcCCCEEEEe
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDG-GVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dG-GI~~~ni~~~~~~Gad~vv~g 57 (82)
..+..++.|+++++..+..++ +.| ..+.+.+..+.++|||.++++
T Consensus 132 ~~~~~~~~i~~lr~~~~~~~v-i~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 132 HSNAVINMIQHIKKHLPESFV-IAGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp CSHHHHHHHHHHHHHCTTSEE-EEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred CcHHHHHHHHHHHHhCCCCEE-EECCcCCHHHHHHHHHcCCCEEEEe
Confidence 344567788889888654444 456 678999999999999999994
No 224
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=92.80 E-value=0.29 Score=32.43 Aligned_cols=45 Identities=16% Similarity=0.260 Sum_probs=35.3
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
.|..++-|+++++.+|+..|-+-.=++.+.++.+.++||+++|+=
T Consensus 48 t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP 92 (217)
T 3lab_A 48 TEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSP 92 (217)
T ss_dssp STTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEES
T ss_pred CccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeC
Confidence 467889999999988775444444457888999999999999874
No 225
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=92.77 E-value=0.39 Score=32.69 Aligned_cols=47 Identities=19% Similarity=0.091 Sum_probs=36.9
Q ss_pred chHHHHHHHHHhCCCCcEEE-EcCCCcccHHHHHHcCCCEEEEeccccC
Q psy11601 15 DMMPKVKWLRENYPTLNIEV-DGGVGPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~-dGGI~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
..++.|+++++.. ++||.. |+-+++..+.+...+|||.+.++.+.+.
T Consensus 107 Gs~~~L~~ir~~v-~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~ 154 (272)
T 3tsm_A 107 GAPEFLTAARQAC-SLPALRKDFLFDPYQVYEARSWGADCILIIMASVD 154 (272)
T ss_dssp CCHHHHHHHHHTS-SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSC
T ss_pred CCHHHHHHHHHhc-CCCEEECCccCCHHHHHHHHHcCCCEEEEcccccC
Confidence 4667788888765 577654 4457888999999999999999988763
No 226
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=92.64 E-value=0.1 Score=45.49 Aligned_cols=54 Identities=26% Similarity=0.345 Sum_probs=40.7
Q ss_pred CCCCCcchHHHH----HHHHHhCCCCcEEEEcCC-CcccHHHHH-----------HcCCCEEEEeccccCC
Q psy11601 9 GQKFMQDMMPKV----KWLRENYPTLNIEVDGGV-GPNTIDECA-----------KAGANWIVSGTAVINC 63 (82)
Q Consensus 9 gq~~~~~~~~ki----~~~~~~~~~~~i~~dGGI-~~~ni~~~~-----------~~Gad~vv~gs~i~~~ 63 (82)
|+........-+ .++++.. ++||.+.||| +.+.+..++ ..|||++.+||.+...
T Consensus 583 GH~g~~~~~~ll~~~~~~ir~~~-~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t 652 (3089)
T 3zen_D 583 GHHSWEDLDDLLLATYSELRSRS-NITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMAT 652 (3089)
T ss_dssp EECCSCCHHHHHHHHHHHHTTCT-TEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTC
T ss_pred CCCCcccHHHHHHHHHHHHhhcC-CCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhC
Confidence 444444455555 5555543 6999999998 778899899 9999999999997753
No 227
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=92.54 E-value=0.34 Score=32.31 Aligned_cols=44 Identities=16% Similarity=0.232 Sum_probs=33.0
Q ss_pred chHHHHHHHHHh-CCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEec
Q psy11601 15 DMMPKVKWLREN-YPTLNIEVDGGVGP-NTIDECAKAGANWIVSGT 58 (82)
Q Consensus 15 ~~~~ki~~~~~~-~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs 58 (82)
..++.++.+++. .++++|-+.|||+- +.+..++++||+.+-+.+
T Consensus 175 At~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 175 ASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred CCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcchhcccch
Confidence 345566666554 35799999999984 788899999999765544
No 228
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=92.53 E-value=0.42 Score=32.46 Aligned_cols=52 Identities=17% Similarity=0.279 Sum_probs=36.4
Q ss_pred CCCCCCCCCcchHHHHHHHHHh-CCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEecc
Q psy11601 5 PGFGGQKFMQDMMPKVKWLREN-YPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~-~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~ 59 (82)
.||.... ..++.++-+++. .++++|-+.|||+- +.+..++++||+.+-+.+.
T Consensus 194 TGf~~~G---AT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS~g 247 (260)
T 3r12_A 194 TGFGTGG---ATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIGTSSG 247 (260)
T ss_dssp CSSSSCC---CCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred CCCCCCC---CCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeecchH
Confidence 5665333 345555555553 35799999999984 7888999999997655543
No 229
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=92.52 E-value=0.14 Score=34.16 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=33.2
Q ss_pred chHHHHHH--HHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEE--EEecccc
Q psy11601 15 DMMPKVKW--LRENYPTLNIEVDGGVG-PNTIDECAKAGANWI--VSGTAVI 61 (82)
Q Consensus 15 ~~~~ki~~--~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~v--v~gs~i~ 61 (82)
..++.++. +++... ++|.+.|||+ .+.+..+.++|++.| .+|..||
T Consensus 177 At~~dv~l~~m~~~v~-v~VKaaGGirt~~~al~~i~aGa~RiG~S~g~~I~ 227 (234)
T 1n7k_A 177 DPVTVFRLASLAKPLG-MGVKASGGIRSGIDAVLAVGAGADIIGTSSAVKVL 227 (234)
T ss_dssp SHHHHHHHHHHHGGGT-CEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHHH
T ss_pred CCHHHHHHHHHHHHHC-CCEEEecCCCCHHHHHHHHHcCccccchHHHHHHH
Confidence 34555555 676655 8999999999 667888999999944 3334455
No 230
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=92.46 E-value=0.23 Score=35.00 Aligned_cols=44 Identities=18% Similarity=0.345 Sum_probs=36.7
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
+..++.|+++++..+++|+.+-+..+.+.+..+.++|+|.|++|
T Consensus 179 ~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 179 TRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEEC
Confidence 45677788888886678888867788999999999999999994
No 231
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=92.42 E-value=0.21 Score=37.35 Aligned_cols=46 Identities=20% Similarity=0.369 Sum_probs=40.5
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
.....++.++++++.+|+++|.+=.=.+.+-...|..+|||.+-+|
T Consensus 305 hs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 305 NSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp CSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred ccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeec
Confidence 4567888999999998888888888889999999999999999877
No 232
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=91.53 E-value=0.28 Score=32.95 Aligned_cols=52 Identities=19% Similarity=0.330 Sum_probs=35.2
Q ss_pred CCCCCCCCCcchHHHHHHHHHh-CCCCcEEEEcCCCc-ccHHHHHHcCCCEEEEecc
Q psy11601 5 PGFGGQKFMQDMMPKVKWLREN-YPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~-~~~~~i~~dGGI~~-~ni~~~~~~Gad~vv~gs~ 59 (82)
.||.... ..++.++.+++. .++++|-+.|||+- +.+..++++||+.+-+.+.
T Consensus 178 TGf~~gg---At~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~riGtS~~ 231 (239)
T 3ngj_A 178 TGFGTHG---ATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGASRIGASAG 231 (239)
T ss_dssp CSSSSCC---CCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEEEEEESCH
T ss_pred CCCCCCC---CCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhcccceecccH
Confidence 5665332 344455554443 34689999999984 7888999999997655543
No 233
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.45 E-value=0.35 Score=35.39 Aligned_cols=46 Identities=33% Similarity=0.436 Sum_probs=38.0
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
.....++.|+++++..++.++.+-+-.+.+.+..+.++|||.+++|
T Consensus 280 ~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 280 HSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp TSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred chhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEEC
Confidence 3456778899999988778888766668899999999999999985
No 234
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=91.31 E-value=0.31 Score=34.19 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=33.7
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
..+.|+++++.. ++|+.+=|..+.+.+..+.++|||.|++|+
T Consensus 199 ~~~~i~~l~~~~-~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 199 EALNLKEFIGSL-DVPVIAGGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp ---CHHHHHHHC-SSCEEEECCCSHHHHHHHHTTTCSEEEESC
T ss_pred cHHHHHHHHHhc-CCCEEECCcCCHHHHHHHHHcCCCEEEECC
Confidence 455677777775 689998777899999999999999999976
No 235
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=91.14 E-value=1.5 Score=30.81 Aligned_cols=63 Identities=17% Similarity=0.215 Sum_probs=46.1
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec----cccCCCCHHHHHHHHHHHH
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT----AVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs----~i~~~~d~~~~~~~l~~~~ 77 (82)
+..++.|+++++.. +.|+.+=|-.+.+.+..+.++|+|.|++.. .+.......+.+.++++.+
T Consensus 215 ~~~~~~i~~lr~~~-~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v 281 (368)
T 2nli_A 215 KISPRDIEEIAGHS-GLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERV 281 (368)
T ss_dssp BCCHHHHHHHHHHS-SSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHc-CCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh
Confidence 44677788888876 588988888999999999999999999953 2332333445666666544
No 236
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=91.12 E-value=0.18 Score=34.23 Aligned_cols=63 Identities=19% Similarity=0.182 Sum_probs=45.7
Q ss_pred CCCCCcchHHHHHH-HHH----hC-----CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LRE----NY-----PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~----~~-----~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
|+.-.|+..+++.. +|+ .+ ..++|.-=|+++++|+.++. +.++|++-+|++.++++|+..-++
T Consensus 172 G~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~ 245 (259)
T 2i9e_A 172 GKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELASQPDIDGFLVGGASLKPEFVDIINA 245 (259)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHhhHHHHhcCCCCCeeeechHhhChHHHHHHHH
Confidence 44555555555444 332 22 24789999999999999876 579999999999998887765543
No 237
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=91.09 E-value=1.3 Score=25.38 Aligned_cols=60 Identities=13% Similarity=0.176 Sum_probs=40.1
Q ss_pred chHHHHHHHHH--hCCCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCC-CHHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRE--NYPTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCP-DRIQAISTLKSSVQK 79 (82)
Q Consensus 15 ~~~~ki~~~~~--~~~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~-d~~~~~~~l~~~~~~ 79 (82)
+.++-++++++ ..+++|+.+. +.-+.+.+..+.++|++.++. ++- ++.+-...+++.++.
T Consensus 65 ~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 65 NGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVD-----KSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp CHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEE-----CCTTSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEE-----CCCCcHHHHHHHHHHHHHH
Confidence 46677888887 4566776555 446777888999999998743 444 555555555555543
No 238
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=90.95 E-value=1.4 Score=27.94 Aligned_cols=60 Identities=13% Similarity=0.178 Sum_probs=39.7
Q ss_pred hHHHHHHHHHhCCCCcEEE-------EcCC----CcccHHHHHHcCCCEEEEeccccCCC--CHHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEV-------DGGV----GPNTIDECAKAGANWIVSGTAVINCP--DRIQAISTLKSS 76 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~-------dGGI----~~~ni~~~~~~Gad~vv~gs~i~~~~--d~~~~~~~l~~~ 76 (82)
..+.|+++++.. ++|+.. ++++ +.+.+..+.++|+|.+.+++.....+ .+.+.++.+++.
T Consensus 44 ~~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~ 116 (223)
T 1y0e_A 44 TKEDILAIKETV-DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTH 116 (223)
T ss_dssp SHHHHHHHHHHC-CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHhc-CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHh
Confidence 345567777765 577742 2333 34678899999999999997765432 556666666654
No 239
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=90.93 E-value=0.28 Score=34.66 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=36.2
Q ss_pred chHHHHHHHHHhCCCCcEEEE---cCCCcccHHHHHHcCCCEEEEec
Q psy11601 15 DMMPKVKWLRENYPTLNIEVD---GGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~d---GGI~~~ni~~~~~~Gad~vv~gs 58 (82)
..++.|+++++.. ++||.+- +|++++.+..+.++|||.|+++.
T Consensus 174 ~~~~~i~~i~~~~-~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g 219 (368)
T 3vkj_A 174 YALEKLRDISKEL-SVPIIVKESGNGISMETAKLLYSYGIKNFDTSG 219 (368)
T ss_dssp HHHHHHHHHHTTC-SSCEEEECSSSCCCHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeC
Confidence 3688888888875 6898884 46899999999999999999854
No 240
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=90.74 E-value=0.99 Score=29.65 Aligned_cols=60 Identities=18% Similarity=0.256 Sum_probs=41.2
Q ss_pred chHHHHHHHHHhCCCCcEE----EE-cC----CC--cccHHHHHHcCCCEEEEecccc-CCCCHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIE----VD-GG----VG--PNTIDECAKAGANWIVSGTAVI-NCPDRIQAISTLKS 75 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~----~d-GG----I~--~~ni~~~~~~Gad~vv~gs~i~-~~~d~~~~~~~l~~ 75 (82)
...+.|+++++.. ++|+. -+ || |+ .+.+.++.++|||.+++++... .++.+.+.++.+++
T Consensus 56 ~~~~~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~ 127 (229)
T 3q58_A 56 EGIENLRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRL 127 (229)
T ss_dssp ESHHHHHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHH
Confidence 4577888888876 57764 22 22 23 3478999999999999997764 45566666666654
No 241
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=90.70 E-value=0.29 Score=41.49 Aligned_cols=48 Identities=10% Similarity=0.144 Sum_probs=39.9
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHH-----------HcCCCEEEEeccccC
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECA-----------KAGANWIVSGTAVIN 62 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~-----------~~Gad~vv~gs~i~~ 62 (82)
...+.-+.++++.. ++|+.++|||. .+.+..++ .+|||++.+||.+..
T Consensus 741 ~~~l~lv~~i~~~~-~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~ 800 (2060)
T 2uva_G 741 QPILLMYSRIRKCS-NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMT 800 (2060)
T ss_dssp HHHHHHHHHHHTST-TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGG
T ss_pred chHHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhc
Confidence 44677788888875 69999999996 56788888 899999999999765
No 242
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=90.70 E-value=0.3 Score=34.50 Aligned_cols=44 Identities=23% Similarity=0.132 Sum_probs=34.8
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
+..++.|+++++..++++|.+=+-.+.+.+..+.++|||.+++|
T Consensus 126 ~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 126 KYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEc
Confidence 44567788888876667777633568999999999999999985
No 243
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=90.60 E-value=0.99 Score=32.00 Aligned_cols=62 Identities=24% Similarity=0.347 Sum_probs=42.8
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEecc----ccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTA----VINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~----i~~~~d~~~~~~~l~~~~ 77 (82)
..++.|+++++.. +.|+.+=|-.+.+.+..+.++|+|.|+++.. ........+.+.++++.+
T Consensus 239 ~~~~~i~~lr~~~-~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av 304 (392)
T 2nzl_A 239 ISWEDIKWLRRLT-SLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAV 304 (392)
T ss_dssp CCHHHHHHHC--C-CSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-CCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHc
Confidence 3677788888765 5888887778999999999999999999422 222333445555555544
No 244
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=90.52 E-value=0.56 Score=31.21 Aligned_cols=46 Identities=20% Similarity=0.272 Sum_probs=35.0
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
.|..++-|+++++..+.+.+-+-.=++.+.++.+.++||+++++..
T Consensus 69 t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~ 114 (232)
T 4e38_A 69 SDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG 114 (232)
T ss_dssp STTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS
T ss_pred CCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC
Confidence 3577888999998776654444334578889999999999998764
No 245
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=90.47 E-value=1 Score=26.49 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=38.8
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++-++++++..+++|+.+..+ -+.+.+..+.++|++.++ .++-++.+-...+++.
T Consensus 97 ~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~~i~~~ 154 (157)
T 3hzh_A 97 DGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFI-----VKPLDRAKVLQRVMSV 154 (157)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHHT
T ss_pred cHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEE-----eCCCCHHHHHHHHHHH
Confidence 46777888888777777665554 567778899999999774 3444555444444443
No 246
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=90.42 E-value=0.73 Score=31.54 Aligned_cols=63 Identities=16% Similarity=0.118 Sum_probs=45.9
Q ss_pred CCCCCcchHHHHHH-HHH----hC-----CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LRE----NY-----PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~----~~-----~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
|+.-.|+..+++.. +|+ .+ ..++|.-=|+++++|+.++. +.++|++-+|++.++++|+.+-++
T Consensus 192 GktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgASLka~~F~~Ii~ 265 (275)
T 1mo0_A 192 GKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPDFVKIINA 265 (275)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGSTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCHhhHHHHhcCCCCCeeEechHHhChHHHHHHHH
Confidence 44455555555444 332 22 24789999999999998776 579999999999998887765554
No 247
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=90.30 E-value=1.5 Score=30.82 Aligned_cols=62 Identities=16% Similarity=0.136 Sum_probs=44.7
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec----cccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT----AVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs----~i~~~~d~~~~~~~l~~~~ 77 (82)
-..+.|+++++.. +.|+.+=|-.+.+.+..+.++|+|.|++.. .+...+...+.+.++.+.+
T Consensus 204 ~~w~~i~~lr~~~-~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av 269 (352)
T 3sgz_A 204 FCWNDLSLLQSIT-RLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAV 269 (352)
T ss_dssp CCHHHHHHHHHHC-CSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhc-CCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHh
Confidence 4567788888875 689988888999999999999999999842 2333333445555555443
No 248
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=90.12 E-value=0.76 Score=31.39 Aligned_cols=60 Identities=23% Similarity=0.310 Sum_probs=42.8
Q ss_pred CCCCCcchHHHHHH-HHHh----C-----CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LREN----Y-----PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQA 69 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~----~-----~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~ 69 (82)
|..-.|+..+.+.. +|+. + +.++|.-=|+++++|+.++. +.++|++-+|++-.+ ++..+-
T Consensus 196 G~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgASL~-~~F~~I 266 (271)
T 3krs_A 196 GVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELIKCADIDGFLVGGASLK-PTFAKI 266 (271)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHHHHHSTTCCEEEESGGGGS-TTHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHhcCCCCCEEEeeHHhhh-HHHHHH
Confidence 55555655555433 3332 2 24789999999999999876 578999999999887 465443
No 249
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=90.02 E-value=0.72 Score=32.28 Aligned_cols=52 Identities=10% Similarity=-0.040 Sum_probs=41.8
Q ss_pred CCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcC-CCEEEEe
Q psy11601 6 GFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 6 G~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~G-ad~vv~g 57 (82)
.+--|++.++.++.++++++..+++||++|+.++.+.+.++++.| +|.+.+.
T Consensus 221 ~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 221 LWVEDPILRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp SEEESCBCTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC
T ss_pred eEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC
Confidence 344577878888889998887525999999999888888888877 7888776
No 250
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=90.00 E-value=0.64 Score=32.65 Aligned_cols=61 Identities=20% Similarity=0.206 Sum_probs=39.1
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+..+.++++++. ...|+.+-.|++ .+.+..+.++|+|.+++.++--.++...+.++++++.
T Consensus 82 ~~~~~I~~vk~~-~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~ 143 (361)
T 3khj_A 82 SQVNEVLKVKNS-GGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK 143 (361)
T ss_dssp HHHHHHHHHHHT-TCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-cCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh
Confidence 344556666665 357788888877 6788899999999998865432122233445555443
No 251
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=89.87 E-value=1.6 Score=24.51 Aligned_cols=43 Identities=26% Similarity=0.173 Sum_probs=30.3
Q ss_pred chHHHHHHHHHhCCCCcEEE-EcCCCcccHHHHHHcCCCEEEEe
Q psy11601 15 DMMPKVKWLRENYPTLNIEV-DGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~-dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
+.++-++++++..++.|+.+ .+.-+.+......+.|++.++.-
T Consensus 60 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~k 103 (134)
T 3f6c_A 60 NGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSK 103 (134)
T ss_dssp CHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEG
T ss_pred ChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeC
Confidence 46777888888777777555 45566678889999999987553
No 252
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=89.86 E-value=2 Score=31.53 Aligned_cols=61 Identities=13% Similarity=0.158 Sum_probs=44.0
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec----cccCCCCHHHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT----AVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs----~i~~~~d~~~~~~~l~~~~ 77 (82)
.++.|+++++.. ++||.+=|..+.+.+..+.++|+|.|+++. .+......-+.+.++.+.+
T Consensus 331 ~~~~i~~lr~~~-~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v 395 (511)
T 1kbi_A 331 TWKDIEELKKKT-KLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPIL 395 (511)
T ss_dssp CHHHHHHHHHHC-SSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHH
Confidence 477788888876 689998887789999999999999999942 2322333344555555554
No 253
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=89.84 E-value=0.19 Score=35.08 Aligned_cols=48 Identities=13% Similarity=0.154 Sum_probs=41.0
Q ss_pred CCCcEEEEcCCCcccHHH--HHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 28 PTLNIEVDGGVGPNTIDE--CAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 28 ~~~~i~~dGGI~~~ni~~--~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
..++|.-=|+++++|+.+ + ..++|++-+|++-.++++..+-++++.+.
T Consensus 259 ~~vrILYGGSV~~~n~~~~~l-~~dVDG~LVGgASL~a~~F~~Ii~e~~~~ 308 (310)
T 3s6d_A 259 GEVRILYGGSAGPGLWGPGGL-GKEVDGMFLGRFAHDIEGVRKVVREVEES 308 (310)
T ss_dssp SCEEEEEEEEECTTTTTTTSG-GGTCSEEEECGGGGSHHHHHHHHHHHHHH
T ss_pred CceeEEEcCccCHHHHhhhcc-cCCCCEEEeeheeecHHHHHHHHHHHHHH
Confidence 358899999999999998 6 58999999999999888888777776654
No 254
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=89.73 E-value=1.6 Score=25.12 Aligned_cols=59 Identities=14% Similarity=0.076 Sum_probs=40.6
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+..+ -+.+.+....++|++.+ |.++-++.+-...++..++
T Consensus 81 ~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~-----l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 81 AELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDV-----LRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEE-----EESSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCcee-----EcCCCCHHHHHHHHHHHHh
Confidence 45677788888777788666555 55677788899998876 3445566665566665554
No 255
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=89.64 E-value=1.7 Score=30.01 Aligned_cols=44 Identities=11% Similarity=0.090 Sum_probs=36.0
Q ss_pred cchHHHHHHHHHhCCCCcEEEE---cCCCcccHHHHHHcCCCEEEEe
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVD---GGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~d---GGI~~~ni~~~~~~Gad~vv~g 57 (82)
+..++.++++++..++.++.+- |--+.+.++...++|+|.+.+-
T Consensus 67 ~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I~ 113 (345)
T 1nvm_A 67 HTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVVRVA 113 (345)
T ss_dssp SCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEEEE
T ss_pred CCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEEEE
Confidence 5678888888887678888888 5446889999999999998775
No 256
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=89.41 E-value=2 Score=28.91 Aligned_cols=62 Identities=24% Similarity=0.309 Sum_probs=45.1
Q ss_pred CCCCCcchHHHHHH-HHH----hC-----CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LRE----NY-----PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~----~~-----~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
|+.-.|+..+++.. +|+ .+ ..++|.-=|+++++|+.++. +.++|++-+|++.++ +|+..-++
T Consensus 176 G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~Ii~ 248 (251)
T 2vxn_A 176 GKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLK-PEFRDIID 248 (251)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHhcCCCCCeeeecHHHHH-HHHHHHHH
Confidence 44445555555444 332 22 24789999999999998776 579999999999998 88875543
No 257
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=89.27 E-value=0.82 Score=30.00 Aligned_cols=45 Identities=18% Similarity=0.311 Sum_probs=33.6
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
+...+.|+++++..+++.+-+.-=++.+.++...++|||+++++.
T Consensus 53 ~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~ 97 (224)
T 1vhc_A 53 EAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPG 97 (224)
T ss_dssp TTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSS
T ss_pred chHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECC
Confidence 456778888888876654444332378999999999999998774
No 258
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=89.04 E-value=0.8 Score=30.96 Aligned_cols=60 Identities=20% Similarity=0.219 Sum_probs=42.4
Q ss_pred CCCCCcchHHHHHH-HHHh---------CCCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LREN---------YPTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQA 69 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~---------~~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~ 69 (82)
|..-.|+..+.+.. +|+. .+.++|.-=|+++++|+.++. +.++|++-+|++-.+ ++..+-
T Consensus 177 G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~-~~F~~I 247 (255)
T 3qst_A 177 GKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNELAACPDVDGFLVGGASLE-AGFINI 247 (255)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTTTHHHHHHSTTCCEEEECGGGGS-TTHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHhHHHHHhcCCCCCEEEeeHHHhh-HHHHHH
Confidence 45555555555443 3332 135899999999999998776 578999999999887 465443
No 259
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=88.96 E-value=0.95 Score=31.72 Aligned_cols=45 Identities=22% Similarity=0.212 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCCCcEE-EEcCCCccc----HHHHHHcCC--CEEEEeccccCC
Q psy11601 18 PKVKWLRENYPTLNIE-VDGGVGPNT----IDECAKAGA--NWIVSGTAVINC 63 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~-~dGGI~~~n----i~~~~~~Ga--d~vv~gs~i~~~ 63 (82)
+.++++.... ++|++ ..||.+.+. +....++|+ .+|.+|+.+|+.
T Consensus 235 ~~f~~~~~a~-~~P~v~lsgG~~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 235 QAFREQEAST-DLPYIYLSAGVSAELFQETLVFAHKAGAKFNGVLCGRATWAG 286 (332)
T ss_dssp HHHHHHHHTC-SSCEEEECTTCCHHHHHHHHHHHHHHTCCCCEEEECHHHHTT
T ss_pred HHHHHHHhcC-CCCEEEECCCCCHHHHHHHHHHHHHcCCCcceEEeeHHHHHh
Confidence 3455555544 58855 699998654 455678999 999999999974
No 260
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=88.84 E-value=2.1 Score=24.38 Aligned_cols=58 Identities=10% Similarity=0.058 Sum_probs=38.3
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++..+++|+.+..+ -+.+....+.++|++.++. ++-++.+-...+++.+
T Consensus 63 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~~l~~~~ 121 (143)
T 3jte_A 63 SGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLR-----KPVTAQDLSIAINNAI 121 (143)
T ss_dssp CHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEE-----SSCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEe-----CCCCHHHHHHHHHHHH
Confidence 46777888888777777665544 5566788899999998744 3445554444444443
No 261
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=88.81 E-value=0.81 Score=32.29 Aligned_cols=42 Identities=10% Similarity=0.047 Sum_probs=34.8
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC---CCcccHHHHHHcCCCEEEEe
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG---VGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG---I~~~ni~~~~~~Gad~vv~g 57 (82)
..++.|+++++.. ++||.+-|= .+.+.+..+.++|||.|+++
T Consensus 193 ~~~~~I~~l~~~~-~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 193 SWKKHLSDYAKKL-QLPFILKEVGFGMDVKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHHHHC-CSCEEEEECSSCCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHHhh-CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEe
Confidence 3457888888875 688888853 68999999999999999985
No 262
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=88.51 E-value=0.82 Score=31.46 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=33.7
Q ss_pred hHHHHHHHHHhCCCCcEEEE---cCCCcccHHHHHHcCCCEEEEe
Q psy11601 16 MMPKVKWLRENYPTLNIEVD---GGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~d---GGI~~~ni~~~~~~Gad~vv~g 57 (82)
.++.++++++.. ++||.+- .+++.+.+..+.++|||.+++.
T Consensus 166 ~~~~i~~vr~~~-~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 166 ALKRIEQICSRV-SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHHHC-SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHc-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 567788888765 5788874 4489999999999999999995
No 263
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=88.38 E-value=0.38 Score=32.86 Aligned_cols=51 Identities=18% Similarity=0.418 Sum_probs=32.7
Q ss_pred CCcEEEEcCCCcccHHH----HHHcCCCEEEEe--ccccCC---CCHHHHHHHHHHHHHH
Q psy11601 29 TLNIEVDGGVGPNTIDE----CAKAGANWIVSG--TAVINC---PDRIQAISTLKSSVQK 79 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~----~~~~Gad~vv~g--s~i~~~---~d~~~~~~~l~~~~~~ 79 (82)
.+-++-.|||+.+|+.+ ++++|+..|+=- |+|... ..--+.+++|.+.+++
T Consensus 210 g~~lEPTGGIdl~Nf~~I~~i~l~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~ 269 (275)
T 3m6y_A 210 GFALEPTGGIDKENFETIVRIALEANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKK 269 (275)
T ss_dssp TCEEEEBSSCCTTTHHHHHHHHHHTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHH
T ss_pred CceECCCCCccHhHHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHH
Confidence 57899999999999976 467899887632 555531 1122344444444444
No 264
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=88.36 E-value=3.7 Score=26.65 Aligned_cols=71 Identities=10% Similarity=-0.091 Sum_probs=47.7
Q ss_pred CCCCCcchHHHHHHHHHh----CCCCcEEEEcCCCcccHHHHHHcCCCEEEEe-ccccCCCCHHHHHHHHHHHHHH
Q psy11601 9 GQKFMQDMMPKVKWLREN----YPTLNIEVDGGVGPNTIDECAKAGANWIVSG-TAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~----~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g-s~i~~~~d~~~~~~~l~~~~~~ 79 (82)
+..+.+..++-|...+++ ..++..++.|.-..+.++++...|||-++.. ..-|..-++......|.+.+++
T Consensus 14 ~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~Gad~v~~v~~~~~~~~~~~~~a~~l~~~i~~ 89 (217)
T 3ih5_A 14 EGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPYGVDKLHVFDAEGLYPYTSLPHTSILVNLFKE 89 (217)
T ss_dssp TTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGGTCSEEEEEECGGGSSCCHHHHHHHHHHHHHH
T ss_pred CCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCCCEEEEecCcccccCCHHHHHHHHHHHHHh
Confidence 344566677777666554 3356677778644567889999999988776 4567666666666666665554
No 265
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=88.34 E-value=2.4 Score=24.49 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=40.0
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+..+ -+.+.+..+.++|++.++. ++-++.+-...+++.++
T Consensus 75 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----Kp~~~~~l~~~i~~~~~ 134 (152)
T 3eul_A 75 DGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLL-----KDSTRTEIVKAVLDCAK 134 (152)
T ss_dssp CHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEE-----TTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEe-----cCCCHHHHHHHHHHHHc
Confidence 46777888888777777666554 5566677899999998754 44455555555555443
No 266
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=88.33 E-value=0.95 Score=30.47 Aligned_cols=60 Identities=22% Similarity=0.150 Sum_probs=43.6
Q ss_pred CCCCCcchHHHHHH-HHH----hC-----CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHH
Q psy11601 9 GQKFMQDMMPKVKW-LRE----NY-----PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQ 68 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~----~~-----~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~ 68 (82)
|+.-.|+..+++.. +|+ .+ ..++|.-=|+++++|+.++. +.++|++-+|++.++++|+.+
T Consensus 173 G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~ 243 (248)
T 1r2r_A 173 GKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDI 243 (248)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHHcCCCCCeeEechHHhChHHHHH
Confidence 44455555555444 332 22 24789999999999998776 579999999999998877654
No 267
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=88.25 E-value=2.5 Score=24.46 Aligned_cols=60 Identities=15% Similarity=0.195 Sum_probs=41.5
Q ss_pred cchHHHHHHHHHhCCCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
.+.++-++++++..+++|+.+. +.-+.+....+.++|++.++. ++-++.+-...+++.++
T Consensus 79 ~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----Kp~~~~~l~~~i~~~~~ 139 (150)
T 4e7p_A 79 KTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVL-----KERSIADLMQTLHTVLE 139 (150)
T ss_dssp SCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEE-----TTSCHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEe-----cCCCHHHHHHHHHHHHc
Confidence 3567778888887777776555 445667888999999987754 44466666666665543
No 268
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=87.98 E-value=0.97 Score=32.76 Aligned_cols=43 Identities=19% Similarity=0.332 Sum_probs=34.5
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
..++.++++++..|++|+.+-+=.+.+.+..+.++|||.+++|
T Consensus 282 ~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 282 YQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEEC
Confidence 4567788888877678887644578889999999999999884
No 269
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=87.93 E-value=1.2 Score=28.98 Aligned_cols=45 Identities=16% Similarity=0.307 Sum_probs=33.9
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
+...+.++++++.++++.+-+.-=++.+.++...++|||+++++.
T Consensus 52 ~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~ 96 (214)
T 1wbh_A 52 ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG 96 (214)
T ss_dssp TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS
T ss_pred hhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC
Confidence 566778888888776655444433567899999999999998774
No 270
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=87.91 E-value=1.4 Score=29.35 Aligned_cols=42 Identities=10% Similarity=0.120 Sum_probs=30.9
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-------cccHHHHHHcCCCEEEEe
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-------PNTIDECAKAGANWIVSG 57 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-------~~ni~~~~~~Gad~vv~g 57 (82)
.++-++++++..|++|+.+.|=.| .+-++.+.++|+|++++.
T Consensus 81 ~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 81 VLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT
T ss_pred HHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC
Confidence 455678888876578998875444 245677889999988874
No 271
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=87.86 E-value=2.5 Score=24.02 Aligned_cols=59 Identities=10% Similarity=-0.080 Sum_probs=40.3
Q ss_pred chHHHHHHHHHhCCCCcEEEEc-CCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDG-GVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dG-GI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+.. --+.+......++|++.++ .++-++.+-...+++.+.
T Consensus 66 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l-----~KP~~~~~l~~~i~~~~~ 125 (136)
T 3kto_A 66 SGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFI-----EKPFIEHVLVHDVQQIIN 125 (136)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEE-----ESSBCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHhe-----eCCCCHHHHHHHHHHHHh
Confidence 4677788888877777765554 4556677889999999874 345566655555655544
No 272
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=87.85 E-value=2.4 Score=25.29 Aligned_cols=59 Identities=17% Similarity=0.170 Sum_probs=39.6
Q ss_pred chHHHHHHHHHh--CCCCc-EEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN--YPTLN-IEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~--~~~~~-i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++|+. .+++| |.+.+--+.+...+..++||+.+ |.++=++.+-.+.+++.++
T Consensus 71 dG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~y-----l~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 71 QGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGY-----IVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp CHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEE-----EESSCCHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEE-----EECCCCHHHHHHHHHHHHh
Confidence 456777777763 34566 45566677888899999999976 4455566655555555544
No 273
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=87.70 E-value=1.5 Score=30.48 Aligned_cols=52 Identities=21% Similarity=0.203 Sum_probs=40.0
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecccc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
-|++.+..++.++++++.. ++||++++.+. ++.+.++++.| +|.+.+.-.-.
T Consensus 222 EqP~~~~~~~~~~~l~~~~-~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 275 (384)
T 2pgw_A 222 EQPTVSWSIPAMAHVREKV-GIPIVADQAAFTLYDVYEICRQRAADMICIGPREI 275 (384)
T ss_dssp ECCSCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred eCCCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhh
Confidence 4667777888888888876 69999999984 67888888766 78887754444
No 274
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=87.69 E-value=0.4 Score=32.48 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=32.2
Q ss_pred CCCCCCCCCCcchHHHHHHH-HHh--CCCCcEEEEcCCC-cccHHHHHHcCCC
Q psy11601 4 EPGFGGQKFMQDMMPKVKWL-REN--YPTLNIEVDGGVG-PNTIDECAKAGAN 52 (82)
Q Consensus 4 ~pG~~gq~~~~~~~~ki~~~-~~~--~~~~~i~~dGGI~-~~ni~~~~~~Gad 52 (82)
..||....-.++.+.-+++. +.. .++++|-+.|||+ .+.+..+.++|++
T Consensus 170 STGf~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 170 STGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp CCSCSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 35665333344444455553 222 3579999999999 7788889998765
No 275
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=87.66 E-value=0.91 Score=30.78 Aligned_cols=63 Identities=25% Similarity=0.356 Sum_probs=45.3
Q ss_pred CCCCCcchHHHHHH-HHH----hC-----CCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LRE----NY-----PTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~----~~-----~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
|..-.|+..+++.. +|+ .+ ..++|.-=|+++++|+.++. +.++|++-+|++.++++|+..-++
T Consensus 182 G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~ii~ 255 (261)
T 1m6j_A 182 GKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGGASLDAAKFKTIIN 255 (261)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSHHHHHHHHG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCHhhHHHHhcCCCCCeeEecHHHhChHHHHHHHH
Confidence 44555555555444 332 22 24789999999999998876 579999999999998777665443
No 276
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=87.66 E-value=1.5 Score=30.71 Aligned_cols=42 Identities=24% Similarity=0.325 Sum_probs=36.1
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
.++.++++++.. +.|+.+=|-.+.+.+..+.++|+|.|+++.
T Consensus 213 ~~~~i~~l~~~~-~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTIT-SLPILVKGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHC-CSCEEEECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHh-CCCEEEEecCCHHHHHHHHHcCCCEEEECC
Confidence 567788888876 689998788899999999999999999964
No 277
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=87.57 E-value=1.5 Score=29.77 Aligned_cols=42 Identities=12% Similarity=0.168 Sum_probs=34.7
Q ss_pred CCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHHH
Q psy11601 29 TLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQAI 70 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~ 70 (82)
.++|.==|.++++|+.++. +..+|++-+|++-+++++..+-+
T Consensus 210 ~~rIlYGGSV~~~N~~el~~~~diDG~LVGgASL~~~~F~~Ii 252 (267)
T 3ta6_A 210 TVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLA 252 (267)
T ss_dssp TSCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGSHHHHHHHH
T ss_pred cceEEEcCCcCHhHHHHHhcCCCCCEEEechHhcCHHHHHHHH
Confidence 5899999999999999887 57899999999988766554443
No 278
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=87.49 E-value=1.7 Score=24.30 Aligned_cols=42 Identities=10% Similarity=0.072 Sum_probs=29.7
Q ss_pred chHHHHHHHHHhCCCCcEEEE-cCCCcccHHHHHHcCCCEEEE
Q psy11601 15 DMMPKVKWLRENYPTLNIEVD-GGVGPNTIDECAKAGANWIVS 56 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~ 56 (82)
+.++-++++++..+++|+.+. +.-+.+...+..++|++.++.
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~ 107 (130)
T 3eod_A 65 NGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLL 107 (130)
T ss_dssp -CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEE
T ss_pred CHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEe
Confidence 456777888887667776554 455666678899999998743
No 279
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=87.39 E-value=1.1 Score=31.60 Aligned_cols=41 Identities=22% Similarity=0.504 Sum_probs=34.8
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
.++.|+++++.. ++|+.+=|-.+.+.+..+.++|+|.|+++
T Consensus 213 ~~~~i~~i~~~~-~~Pv~vkgv~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 213 NWEALRWLRDLW-PHKLLVKGLLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp CHHHHHHHHHHC-CSEEEEEEECCHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHhc-CCCEEEEecCcHHHHHHHHHcCCCEEEEc
Confidence 456788888876 58888877789999999999999999995
No 280
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=87.36 E-value=2.6 Score=23.76 Aligned_cols=59 Identities=7% Similarity=-0.003 Sum_probs=40.3
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+..+- +.+....+.++|++.+ +.++-++.+-...+++.++
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~-----l~kP~~~~~l~~~i~~~~~ 124 (137)
T 3hdg_A 65 GGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLF-----LPKPIEPGRLMETLEDFRH 124 (137)
T ss_dssp CHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEE-----CCSSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCccee-----EcCCCCHHHHHHHHHHHHH
Confidence 467778888887777887766554 4567778899999876 4445566555555555443
No 281
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=87.33 E-value=2.5 Score=23.61 Aligned_cols=60 Identities=12% Similarity=0.127 Sum_probs=37.8
Q ss_pred chHHHHHHHHHh--CCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN--YPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 15 ~~~~ki~~~~~~--~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
+.++-++++++. .+++|+.+..+-..........+|++.++ .++-++.+-...+++.++.
T Consensus 61 ~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 61 DGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYL-----VKPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp CHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEE-----ESSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEE-----eccCCHHHHHHHHHHHHhh
Confidence 467777888875 34788877777655555778888988753 3555666666666666654
No 282
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=86.88 E-value=0.38 Score=32.45 Aligned_cols=61 Identities=18% Similarity=0.253 Sum_probs=43.5
Q ss_pred CCCCCcchHHHHHH-HHH----h-----CCCCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCCCCHHHHH
Q psy11601 9 GQKFMQDMMPKVKW-LRE----N-----YPTLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINCPDRIQAI 70 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~----~-----~~~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~~d~~~~~ 70 (82)
|+.-.|+..+++.. +|+ + ...++|.-=|+++++|+.++. +.++|++-+|++.++ +|+..-+
T Consensus 172 G~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~Ii 243 (247)
T 1ney_A 172 GLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLK-PEFVDII 243 (247)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCTTCCEEEESGGGGS-THHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHHHHHHcCCCCCeeEeehHHHH-HHHHHHH
Confidence 45555555555444 333 1 124789999999999998765 679999999999998 7765443
No 283
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=86.84 E-value=0.63 Score=33.86 Aligned_cols=46 Identities=24% Similarity=0.366 Sum_probs=36.9
Q ss_pred CcchHHHHHHHHHhCCC-CcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 13 MQDMMPKVKWLRENYPT-LNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~-~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
....++.++++++..++ +++.+-+..+.+.+..+.++|+|.+++|.
T Consensus 267 ~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 267 SEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp SHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred ccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecc
Confidence 34467778778877655 78887777889999999999999998863
No 284
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=86.82 E-value=1 Score=30.80 Aligned_cols=50 Identities=10% Similarity=0.135 Sum_probs=39.4
Q ss_pred CCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEE
Q psy11601 6 GFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 6 G~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~ 56 (82)
|+--|++.++.++.++++++.. ++||++++.+ +.+.+.++++.| +|.+.+
T Consensus 213 ~~iE~P~~~~~~~~~~~l~~~~-~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 213 AVYEQPVRREDIEGLKFVRFHS-PFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp SEEECCSCTTCHHHHHHHHHHS-SSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred eeeeCCCCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 4667888888888999998875 6999999998 567777787777 676655
No 285
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=86.81 E-value=2 Score=29.35 Aligned_cols=59 Identities=17% Similarity=0.169 Sum_probs=42.4
Q ss_pred CCCCCcchHHHHHH-HHHh-----CCCCcEEEEcCCCcccHHHHHHc-CCCEEEEeccccCCCCHH
Q psy11601 9 GQKFMQDMMPKVKW-LREN-----YPTLNIEVDGGVGPNTIDECAKA-GANWIVSGTAVINCPDRI 67 (82)
Q Consensus 9 gq~~~~~~~~ki~~-~~~~-----~~~~~i~~dGGI~~~ni~~~~~~-Gad~vv~gs~i~~~~d~~ 67 (82)
|+.-.|+....+.. ||+. ...++|.==|+++++|+.++... .+|++-+|++-+++++..
T Consensus 200 G~tAt~e~aqevh~~IR~~l~~~~a~~~rIlYGGSV~~~N~~el~~~~dIDG~LVGgASL~~~~F~ 265 (272)
T 4g1k_A 200 GKSATAEQAQQVHAFLRGRLAAKGAGHVSLLYGGSVKADNAAELFGQPDIDGGLIGGASLKSGDFL 265 (272)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHTCTTSCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCceEEEcCCcCHhHHHHHhcCCCCCEEEechHhcCHHHHH
Confidence 44445555555443 4432 23589999999999999999865 899999999887655443
No 286
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=86.52 E-value=1.2 Score=30.64 Aligned_cols=40 Identities=10% Similarity=0.054 Sum_probs=33.6
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEE
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWI 54 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~v 54 (82)
-..++.|+++++.. .+|+.+.+++. .+.+..+.++|||.|
T Consensus 64 ~~~~~~i~~i~~~v-~iPvl~k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 64 SVDPLKIEEIRKCI-SINVLAKVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp CCCHHHHHHHHTTC-CSEEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHhc-CCCEEEeccCCcHHHHHHHHHcCCCEE
Confidence 35788889998876 69999988776 777888889999998
No 287
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=86.33 E-value=2.8 Score=23.01 Aligned_cols=57 Identities=16% Similarity=0.013 Sum_probs=38.0
Q ss_pred chHHHHHHHHHh--CCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN--YPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~--~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++-++++++. .+++|+.+.+.-+.+......+.|++.++ .++-++.+-...+++.
T Consensus 64 ~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l-----~kp~~~~~l~~~i~~~ 122 (127)
T 2gkg_A 64 NGYLICGKLKKDDDLKNVPIVIIGNPDGFAQHRKLKAHADEYV-----AKPVDADQLVERAGAL 122 (127)
T ss_dssp BHHHHHHHHHHSTTTTTSCEEEEECGGGHHHHHHSTTCCSEEE-----ESSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCccccCCCEEEEecCCchhHHHHHHhCcchhe-----eCCCCHHHHHHHHHHH
Confidence 456677778876 56788777666666778888899998764 3444555544555444
No 288
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=86.06 E-value=2.5 Score=23.98 Aligned_cols=42 Identities=7% Similarity=0.013 Sum_probs=30.7
Q ss_pred chHHHHHHHHH--hCCCCcEEEEcC-CCcccHHHHHHcCCCEEEE
Q psy11601 15 DMMPKVKWLRE--NYPTLNIEVDGG-VGPNTIDECAKAGANWIVS 56 (82)
Q Consensus 15 ~~~~ki~~~~~--~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~ 56 (82)
+.++-++++++ ..+++|+.+..+ -+.+.+..+.++|++.++.
T Consensus 65 ~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 109 (140)
T 3lua_A 65 EGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYIL 109 (140)
T ss_dssp HHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEE
T ss_pred cHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEE
Confidence 45677788887 556777665554 5667888999999998754
No 289
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=85.94 E-value=1.5 Score=30.37 Aligned_cols=52 Identities=10% Similarity=0.035 Sum_probs=38.8
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecccc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
-|++.++.++.++++++.. ++||++++.+ +.+.+.++++.| +|.+.+--.-.
T Consensus 223 EqP~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 276 (371)
T 2ovl_A 223 EEPTIPDDLVGNARIVRES-GHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNI 276 (371)
T ss_dssp ECCSCTTCHHHHHHHHHHH-CSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTT
T ss_pred ECCCCcccHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCcccc
Confidence 4677777888888888765 5899999998 567788887776 67766554433
No 290
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=85.83 E-value=3 Score=22.88 Aligned_cols=55 Identities=18% Similarity=0.159 Sum_probs=36.1
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLK 74 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~ 74 (82)
+.++-++++++..++.|+.+..+ -+.+......++|++.++ .++-++.+-...++
T Consensus 61 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~~i~ 116 (120)
T 1tmy_A 61 NGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFI-----VKPFQPSRVVEALN 116 (120)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEE-----ESSCCHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcceeE-----eCCCCHHHHHHHHH
Confidence 45667778887767777666554 556677888899998764 34445554444443
No 291
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=85.54 E-value=3.2 Score=27.96 Aligned_cols=53 Identities=19% Similarity=0.332 Sum_probs=36.3
Q ss_pred CCcEEEEcCCCcccHHH----HHHcCCCEEEEe--ccccCC---CCHHHHHHHHHHHHHHhh
Q psy11601 29 TLNIEVDGGVGPNTIDE----CAKAGANWIVSG--TAVINC---PDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~----~~~~Gad~vv~g--s~i~~~---~d~~~~~~~l~~~~~~~~ 81 (82)
.+-++-.|||+.+|+.+ ++++|+..++=- |+|... ..--+.+++|.+.+++.+
T Consensus 187 g~~lEPTGGIdl~N~~~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 187 DFWLEPTGGIDLENYSEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEMTKQLV 248 (249)
T ss_dssp TCEEEEBSSCCTTTHHHHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHHHHHHC
T ss_pred CceECCCCCccHhhHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHhh
Confidence 57899999999999976 467899887633 555532 122356666666666643
No 292
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=85.38 E-value=2.3 Score=25.74 Aligned_cols=42 Identities=19% Similarity=0.075 Sum_probs=31.5
Q ss_pred chHHHHHHHHHhCCCCcEEEEc-CCCcccHHHHHHcCCCEEEE
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDG-GVGPNTIDECAKAGANWIVS 56 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dG-GI~~~ni~~~~~~Gad~vv~ 56 (82)
+.++-++++++..+++||.+.. --+.+......++||+.++.
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~~l~ 107 (184)
T 3rqi_A 65 SGLSLIAPLCDLQPDARILVLTGYASIATAVQAVKDGADNYLA 107 (184)
T ss_dssp ESHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCSEEEE
T ss_pred cHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHhCHHHhee
Confidence 4677788888877778866554 45566788899999998865
No 293
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=85.35 E-value=4 Score=26.08 Aligned_cols=59 Identities=15% Similarity=0.049 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCCCcEEE-------EcCC----CcccHHHHHHcCCCEEEEeccccCCC---CHHHHHHHHHHH
Q psy11601 17 MPKVKWLRENYPTLNIEV-------DGGV----GPNTIDECAKAGANWIVSGTAVINCP---DRIQAISTLKSS 76 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~-------dGGI----~~~ni~~~~~~Gad~vv~gs~i~~~~---d~~~~~~~l~~~ 76 (82)
.+.++++++.. ++|+.. ++++ +.+.+..+.++|||.+.++......+ .+.+.++.+++.
T Consensus 58 ~~~i~~i~~~~-~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~ 130 (234)
T 1yxy_A 58 VRDIKEIQAIT-DLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEK 130 (234)
T ss_dssp HHHHHHHHTTC-CSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHh
Confidence 35566666654 577632 2232 34678999999999999987765432 456666666654
No 294
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=85.34 E-value=1.4 Score=28.95 Aligned_cols=45 Identities=22% Similarity=0.335 Sum_probs=33.5
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
+...+.|+++++.++++.+-+.-=++.+.++...++|||+++++.
T Consensus 62 ~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p~ 106 (225)
T 1mxs_A 62 QHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPG 106 (225)
T ss_dssp THHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSS
T ss_pred ccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeCC
Confidence 456777888888776665544443566889999999999998773
No 295
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=85.33 E-value=3.3 Score=23.06 Aligned_cols=58 Identities=19% Similarity=0.209 Sum_probs=41.6
Q ss_pred chHHHHHHHHHhC--CCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENY--PTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~--~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++.. +..+|.+..+-+.+.+.+..++|++.+ +.++-++.+-...+++..
T Consensus 64 ~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~-----l~kP~~~~~l~~~i~~~~ 123 (132)
T 3lte_A 64 DGLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDY-----LEKPFDNDALLDRIHDLV 123 (132)
T ss_dssp CHHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEE-----ECSSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHH-----hhCCCCHHHHHHHHHHHc
Confidence 4567778888764 457888888888888889999999876 445556665555555543
No 296
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=85.12 E-value=1.9 Score=24.42 Aligned_cols=57 Identities=9% Similarity=-0.007 Sum_probs=37.1
Q ss_pred chHHHHHHHHHhCCCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++-++++++..+++|+.+. +--+.+....+.++|++.++. ++-++.+-...+++.
T Consensus 73 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~L~~~i~~~ 130 (135)
T 3snk_A 73 LGKPGIVEARALWATVPLIAVSDELTSEQTRVLVRMNASDWLH-----KPLDGKELLNAVTFH 130 (135)
T ss_dssp GGSTTHHHHHGGGTTCCEEEEESCCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHHHHHHT
T ss_pred hHHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHHcCcHhhcc-----CCCCHHHHHHHHHHH
Confidence 345566777777667776555 445667788899999998744 455665555555443
No 297
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=85.10 E-value=1.8 Score=29.70 Aligned_cols=50 Identities=8% Similarity=0.189 Sum_probs=38.2
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTA 59 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~ 59 (82)
-|++.++.++.++++++.. ++||++++.+ +++.+.++++.| +|.+.+--.
T Consensus 221 E~P~~~~~~~~~~~l~~~~-~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (359)
T 1mdl_A 221 EEPTLQHDYEGHQRIQSKL-NVPVQMGENWLGPEEMFKALSIGACRLAMPDAM 272 (359)
T ss_dssp ECCSCTTCHHHHHHHHHTC-SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred ECCCChhhHHHHHHHHHhC-CCCEEeCCCCCCHHHHHHHHHcCCCCEEeecch
Confidence 4677777888888888875 6999999998 567778877776 677765433
No 298
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=85.00 E-value=1.2 Score=30.24 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=33.5
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCC-------cccHHHHHHcCCCEEEEecc
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVG-------PNTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~-------~~ni~~~~~~Gad~vv~gs~ 59 (82)
..++-++++|+...++|+.+-|=.| .+-++.+.++|+|++++.-.
T Consensus 83 ~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDl 134 (271)
T 3nav_A 83 ICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADV 134 (271)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTS
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCC
Confidence 5677888888875578988876222 44578899999999888543
No 299
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=84.68 E-value=5.1 Score=24.65 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=25.8
Q ss_pred HHHHHHhC-CCCcEEEEcCCCcccHHHHHHcCCCEEE
Q psy11601 20 VKWLRENY-PTLNIEVDGGVGPNTIDECAKAGANWIV 55 (82)
Q Consensus 20 i~~~~~~~-~~~~i~~dGGI~~~ni~~~~~~Gad~vv 55 (82)
++.+++.. ++++|.+-|.+..+....+.+.|+|.+.
T Consensus 90 i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 90 MAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp HHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 44456653 3688888777777777788999999643
No 300
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=84.41 E-value=5.6 Score=25.36 Aligned_cols=60 Identities=20% Similarity=0.103 Sum_probs=41.1
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCc--ccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGP--NTIDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~--~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
..++.++++++.. +.++.+.-=++. +.++.+.++|+|++.+....+..+.+.+.++.+++
T Consensus 55 ~~~~~i~~l~~~~-~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~ 116 (230)
T 1rpx_A 55 IGPLVVDSLRPIT-DLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKS 116 (230)
T ss_dssp CCHHHHHHHGGGC-CSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHhcc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHH
Confidence 3467778888765 456777666665 46889999999999877553333566666666553
No 301
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=84.40 E-value=0.91 Score=29.45 Aligned_cols=33 Identities=12% Similarity=0.044 Sum_probs=27.6
Q ss_pred CCcEEEEcCCC-cccHHHHHHcCCCEEEEec-cccC
Q psy11601 29 TLNIEVDGGVG-PNTIDECAKAGANWIVSGT-AVIN 62 (82)
Q Consensus 29 ~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs-~i~~ 62 (82)
++|+.|-|+|+ .+.+.+ +++||+.++.++ .+|.
T Consensus 149 ~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 149 GRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp TSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred CCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 68999999996 567778 999999999994 4775
No 302
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=84.39 E-value=1.4 Score=30.14 Aligned_cols=54 Identities=15% Similarity=0.172 Sum_probs=35.9
Q ss_pred HHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHH
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLK 74 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~ 74 (82)
+-++++++..|+.+|.+.-- +.+.+.+..++|+|.+.+.. |.+++.++.++.++
T Consensus 183 ~av~~ar~~~~~~~I~Vev~-t~eea~eal~aGaD~I~LDn--~~~~~~~~~v~~l~ 236 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEVEVD-SLEQLDAVLPEKPELILLDN--FAVWQTQTAVQRRD 236 (284)
T ss_dssp HHHHHHHHHCTTSCEEEEES-SHHHHHHHGGGCCSEEEEET--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEEeC-CHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhh
Confidence 45677777766334444333 68999999999999888877 44455555555544
No 303
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=84.38 E-value=2.9 Score=29.15 Aligned_cols=50 Identities=6% Similarity=0.106 Sum_probs=38.5
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTA 59 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~ 59 (82)
-|++.++.++.++++++.. ++||++++.+ +++.+.++++.| +|.+.+--.
T Consensus 226 EqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 277 (391)
T 2qgy_A 226 EEPVDGENISLLTEIKNTF-NMKVVTGEKQSGLVHFRELISRNAADIFNPDIS 277 (391)
T ss_dssp ECSSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred eCCCChhhHHHHHHHHhhC-CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcc
Confidence 4677777888889988876 6999999998 568888888777 676655433
No 304
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=84.32 E-value=1.4 Score=30.25 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=31.1
Q ss_pred CCCCCCCCCCcchHHHHHHHH-Hh-------CCCCcEEEEcCCCc-ccHHHHHHcCCC
Q psy11601 4 EPGFGGQKFMQDMMPKVKWLR-EN-------YPTLNIEVDGGVGP-NTIDECAKAGAN 52 (82)
Q Consensus 4 ~pG~~gq~~~~~~~~ki~~~~-~~-------~~~~~i~~dGGI~~-~ni~~~~~~Gad 52 (82)
..||....-.++..+-+++.. .. .++++|-+.|||+- +.+..++++|++
T Consensus 192 STGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 192 STGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp CCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 356664333444555555533 22 45799999999983 566678888665
No 305
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=84.31 E-value=2.5 Score=29.25 Aligned_cols=49 Identities=18% Similarity=0.307 Sum_probs=38.6
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCCc--ccHHHHHHcC-CCEEEEec
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP--NTIDECAKAG-ANWIVSGT 58 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~--~ni~~~~~~G-ad~vv~gs 58 (82)
-|++.++.++.++++++.. ++||++++.+.- +.+.++++.| +|.+.+--
T Consensus 232 E~P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~ 283 (382)
T 1rvk_A 232 EEPMDEQSLSSYKWLSDNL-DIPVVGPESAAGKHWHRAEWIKAGACDILRTGV 283 (382)
T ss_dssp ECCSCTTCHHHHHHHHHHC-SSCEEECSSCSSHHHHHHHHHHTTCCSEEEECH
T ss_pred eCCCChhhHHHHHHHHhhC-CCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCc
Confidence 4677778888889988876 699999999854 7888888776 67776643
No 306
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=84.26 E-value=4.3 Score=23.40 Aligned_cols=57 Identities=11% Similarity=0.011 Sum_probs=37.0
Q ss_pred chHHHHHHHHHhCCCCcEEEE-cCCCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVD-GGVGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~d-GGI~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++-++++++..+++|+.+. +.-+.+.+.+....| ++.++. ++-++.+-...++..
T Consensus 62 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~-----KP~~~~~L~~~i~~~ 120 (151)
T 3kcn_A 62 EGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLN-----KPCQMSDIKAAINAG 120 (151)
T ss_dssp CHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEE-----SSCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEc-----CCCCHHHHHHHHHHH
Confidence 467778888887777776554 455566778888999 887743 344554444444443
No 307
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=84.17 E-value=6 Score=25.05 Aligned_cols=59 Identities=10% Similarity=-0.037 Sum_probs=41.0
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+..+ -+.+......++||+.++. ++-++.+-...++..++
T Consensus 81 ~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~-----Kp~~~~~L~~~i~~~~~ 140 (250)
T 3r0j_A 81 DGFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVT-----KPFSLEEVVARLRVILR 140 (250)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEe-----CCCCHHHHHHHHHHHHH
Confidence 46777888888766777665544 5567778889999998754 45566666666665554
No 308
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=84.14 E-value=4.4 Score=23.41 Aligned_cols=59 Identities=14% Similarity=0.161 Sum_probs=39.3
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcC-CCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAG-ANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+..+ -+.+.......+| ++.++ .++-++.+-...+++.++
T Consensus 72 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l-----~KP~~~~~l~~~i~~~l~ 132 (153)
T 3hv2_A 72 DGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYL-----SKPWDDQELLLALRQALE 132 (153)
T ss_dssp CHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEE-----CSSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEE-----eCCCCHHHHHHHHHHHHH
Confidence 46777788888777788666555 5566777888999 88764 344455555555555443
No 309
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=84.00 E-value=2.1 Score=29.48 Aligned_cols=52 Identities=15% Similarity=0.217 Sum_probs=39.2
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecc
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTA 59 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~ 59 (82)
+--|++.++.++.++++++.. ++||++++.+ +++.+.++++.| +|.+.+--.
T Consensus 216 ~iEqP~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 216 WIEQPVIADDIDAMAHIRSKT-DLPLMIDEGLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp CEECCBCTTCHHHHHHHHHTC-CSCEEESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EEECCCCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecc
Confidence 335778778888899988875 6999999998 556777777765 777766543
No 310
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=83.96 E-value=1 Score=28.38 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=29.9
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCC--ccc-HHHHHHcCCCEEEE
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVG--PNT-IDECAKAGANWIVS 56 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~--~~n-i~~~~~~Gad~vv~ 56 (82)
+...+-++++++..++.|+.++=++. +++ ++.+.++|||++.+
T Consensus 38 ~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~v 83 (207)
T 3ajx_A 38 AEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTV 83 (207)
T ss_dssp HHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEE
T ss_pred hhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEE
Confidence 44555677777776567877654433 234 78899999999875
No 311
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=83.96 E-value=1.6 Score=30.48 Aligned_cols=47 Identities=6% Similarity=0.025 Sum_probs=36.8
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEE
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~ 56 (82)
-|++.++.++..+++++.. ++||++++.+ +++.+.++++.| +|.+.+
T Consensus 239 E~P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 287 (393)
T 2og9_A 239 EEPLDAYDHEGHAALALQF-DTPIATGEMLTSAAEHGDLIRHRAADYLMP 287 (393)
T ss_dssp ECCSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred ECCCCcccHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHHCCCCCEEee
Confidence 4677777888888888876 6999999998 557788888777 676644
No 312
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=83.95 E-value=1 Score=30.38 Aligned_cols=45 Identities=13% Similarity=0.150 Sum_probs=33.4
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCC-------cccHHHHHHcCCCEEEEecc
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVG-------PNTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~-------~~ni~~~~~~Gad~vv~gs~ 59 (82)
..++-++++|+...++|+..-|=.| ..-++.+.++|+|++++.-.
T Consensus 81 ~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dl 132 (267)
T 3vnd_A 81 DCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADV 132 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTS
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCC
Confidence 4577788888774578888876444 34578999999999988533
No 313
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=83.94 E-value=2.3 Score=29.31 Aligned_cols=50 Identities=14% Similarity=0.072 Sum_probs=38.2
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTA 59 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~ 59 (82)
-|++.++.++.++++++.. ++||++++.+ +.+.+.++++.| +|.+.+--.
T Consensus 220 EqP~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (370)
T 1nu5_A 220 EQPVPRANFGALRRLTEQN-GVAILADESLSSLSSAFELARDHAVDAFSLKLC 271 (370)
T ss_dssp ECCSCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred eCCCCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchh
Confidence 4677778888889988875 6999999988 457777887776 777766433
No 314
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=83.58 E-value=4.2 Score=22.81 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=38.8
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++..+++|+.+..+ -+.+......++|++.++. ++-++.+-...++..+
T Consensus 66 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~~l~~~~ 124 (140)
T 2qr3_A 66 EGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVV-----KPWDNQKLLETLLNAA 124 (140)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEE-----ESCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheee-----CCCCHHHHHHHHHHHH
Confidence 46677788888777788666554 4556778889999988754 3445555555555544
No 315
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=83.31 E-value=2 Score=30.75 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=36.1
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
+..++.++++++..|.+|+.+-|..+.+.+..+.++|+|.+.+|
T Consensus 259 ~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 259 AGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred hhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEEC
Confidence 35677888888887778888656667888889999999999887
No 316
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=83.23 E-value=2 Score=30.75 Aligned_cols=42 Identities=19% Similarity=0.322 Sum_probs=33.3
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g 57 (82)
...+.|+++++.. ++++.+-+-.+.+.+..+.++|||.|++|
T Consensus 171 ~~~e~I~~ik~~~-~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 171 NIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp HHHHHHHHHHTTC-CCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHhcC-CCeEEEeecCCHHHHHHHHHcCCCEEEEe
Confidence 4467788888765 57777645578899999999999999995
No 317
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=82.91 E-value=4.4 Score=22.47 Aligned_cols=58 Identities=16% Similarity=0.013 Sum_probs=38.5
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++..+++|+.+..+ -+.+......++|++.++ .++-++.+-...+++.+
T Consensus 61 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l-----~Kp~~~~~l~~~i~~~~ 119 (126)
T 1dbw_A 61 SGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFI-----EKPFEDTVIIEAIERAS 119 (126)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHhe-----eCCCCHHHHHHHHHHHH
Confidence 45666777877666778666554 456677889999998764 34456655555555544
No 318
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=82.89 E-value=2.4 Score=28.39 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=33.9
Q ss_pred CCcEEEEcCCCcccHHHHHH-cCCCEEEEeccccCCCCHHHHH
Q psy11601 29 TLNIEVDGGVGPNTIDECAK-AGANWIVSGTAVINCPDRIQAI 70 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~~-~Gad~vv~gs~i~~~~d~~~~~ 70 (82)
.++|.-=|+++++|+.++.. ..+|++-+|++=+. ++...-+
T Consensus 199 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~-~~F~~Ii 240 (244)
T 2v5b_A 199 QLRILYGGSVTAKNARTLYQMRDINGFLVGGASLK-PEFVEII 240 (244)
T ss_dssp HCEEEECSCCCHHHHHHHHTSTTCCEEEESGGGSS-TTHHHHH
T ss_pred cccEEEcCCCCHhHHHHHhcCCCCCeeeechHHHH-HHHHHHH
Confidence 47899999999999998874 57999999998887 7765443
No 319
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=82.82 E-value=5 Score=23.07 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=37.0
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+..+- +.+.+......|++.+ +.++-++.+-...++..++
T Consensus 64 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~-----l~kp~~~~~L~~~l~~~~~ 123 (154)
T 2qsj_A 64 EAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGF-----IPKSADPQVLIHAVSLILE 123 (154)
T ss_dssp -CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBB-----CCTTSCHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEE-----EeCCCCHHHHHHHHHHHHc
Confidence 456677888887777887776554 4567788889998865 4445566655555555443
No 320
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=82.42 E-value=5.1 Score=22.89 Aligned_cols=58 Identities=21% Similarity=0.187 Sum_probs=32.5
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++..+.+|+.+..+ -+.+.+....+.|++.+ |.++-++.+-...+++.+
T Consensus 63 ~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~-----l~KP~~~~~L~~~i~~~~ 121 (141)
T 3cu5_A 63 DGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRY-----VEKPIDPSEIMDALKQSI 121 (141)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEE-----ECSSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEE-----EeCCCCHHHHHHHHHHHH
Confidence 45667777877777788766655 45567778889998866 344445555445554443
No 321
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=82.36 E-value=1.8 Score=29.60 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=33.7
Q ss_pred CCcEEEEcCCCcccHHHHHHc-CCCEEEEeccccCCCCHHH
Q psy11601 29 TLNIEVDGGVGPNTIDECAKA-GANWIVSGTAVINCPDRIQ 68 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~~~-Gad~vv~gs~i~~~~d~~~ 68 (82)
.++|.==|.++++|+.++... .+|++-+|++-+++++..+
T Consensus 227 ~~rIlYGGSV~~~Na~el~~~~dIDG~LVGgASL~~~~F~~ 267 (275)
T 3kxq_A 227 KIRLLYGGSVKPSNAFELLSTAHVNGALIGGASLKAIDFLT 267 (275)
T ss_dssp TSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHH
T ss_pred cceEEEcCCcCHhHHHHHHcCCccceEEeehhhcCHHHHHH
Confidence 589999999999999999865 8999999998886655443
No 322
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=82.32 E-value=0.94 Score=38.52 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=36.2
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHH-----------HcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-PNTIDECA-----------KAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~-----------~~Gad~vv~gs~i~~ 62 (82)
.+.-+.++++.. ++|+.+.|||. .+-+..++ ..|||++-+||.+..
T Consensus 750 ~l~l~~~v~~~~-~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~ 807 (2051)
T 2uv8_G 750 MLQMYSKIRRHP-NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMI 807 (2051)
T ss_dssp HHHHHHHHTTCT-TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTT
T ss_pred HHHHHHHHHhcC-CceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHh
Confidence 445567777764 69999999995 45566777 799999999999775
No 323
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=82.17 E-value=5.4 Score=23.00 Aligned_cols=42 Identities=14% Similarity=0.085 Sum_probs=31.1
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEE
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVS 56 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~ 56 (82)
..++-++++++..+++|+.+..+ -+.+........|++.++.
T Consensus 61 ~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~ 103 (155)
T 1qkk_A 61 DGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIA 103 (155)
T ss_dssp CHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCCeEEe
Confidence 45677788888777788776655 4556778889999998754
No 324
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=82.10 E-value=3.2 Score=28.98 Aligned_cols=52 Identities=12% Similarity=0.066 Sum_probs=39.3
Q ss_pred CCCCCcchHHHHHHHHH-hCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecccc
Q psy11601 9 GQKFMQDMMPKVKWLRE-NYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~-~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
-|++.++.++.++++++ .. ++||++|+.+ +.+.+.++++.| +|.+.+--.-.
T Consensus 227 EqP~~~~d~~~~~~l~~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 281 (401)
T 2hzg_A 227 EEPFDAGALAAHAALAGRGA-RVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRI 281 (401)
T ss_dssp ECCSCTTCHHHHHHHHTTCC-SSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHH
T ss_pred ECCCCccCHHHHHHHHhhCC-CCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchh
Confidence 46677778888888887 54 6999999998 557888888766 78777654433
No 325
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=82.05 E-value=1.6 Score=30.46 Aligned_cols=48 Identities=6% Similarity=-0.013 Sum_probs=37.3
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEe
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~g 57 (82)
-|++.++.++.++++++.. ++||++++.+. ++.+.++++.| +|.+.+-
T Consensus 240 EqP~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 289 (388)
T 2nql_A 240 EAPVWTEDIAGLEKVSKNT-DVPIAVGEEWRTHWDMRARIERCRIAIVQPE 289 (388)
T ss_dssp ECCSCTTCHHHHHHHHTSC-CSCEEECTTCCSHHHHHHHHTTSCCSEECCC
T ss_pred ECCCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHHcCCCCEEEec
Confidence 4677777888888888865 69999999984 67788888776 6776553
No 326
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=81.84 E-value=4.9 Score=22.33 Aligned_cols=58 Identities=19% Similarity=0.156 Sum_probs=38.0
Q ss_pred chHHHHHHHHHh--CCCCcEEE-EcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN--YPTLNIEV-DGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~--~~~~~i~~-dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++. .+++|+.+ .+.-+.+......++|++.++ .++-++.+-...+++.+
T Consensus 60 ~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l-----~KP~~~~~L~~~i~~~l 120 (122)
T 3gl9_A 60 DGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVM-----RKPFSPSQFIEEVKHLL 120 (122)
T ss_dssp CHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhc-----cCCCCHHHHHHHHHHHh
Confidence 456677777764 24677555 444567778889999999764 45556666556665554
No 327
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=81.75 E-value=5.2 Score=22.58 Aligned_cols=58 Identities=19% Similarity=0.256 Sum_probs=38.1
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
..++-++++++..+++|+.+..+ -+.+......+.|++.++ .++-++.+-...++..+
T Consensus 61 ~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l-----~kP~~~~~l~~~i~~~~ 119 (142)
T 2qxy_A 61 ESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYI-----LKPFRLDYLLERVKKII 119 (142)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEE-----ESSCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeE-----eCCCCHHHHHHHHHHHH
Confidence 45666778887777788666554 456667889999998764 34445555445555444
No 328
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=81.66 E-value=1.4 Score=24.65 Aligned_cols=57 Identities=12% Similarity=0.031 Sum_probs=36.7
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCc------ccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGP------NTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~------~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++-++++++..+++|+.+..+-.. +.+.....+|++.+ +.++-++.+-...+++.
T Consensus 60 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~-----l~KP~~~~~l~~~l~~~ 122 (135)
T 3eqz_A 60 DGIEVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINT-----FTKPINTEVLTCFLTSL 122 (135)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEE-----EESSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCCCEEEEEeccchhHHHHHHHHHHcCCCccee-----eCCCCCHHHHHHHHHHH
Confidence 45677888888877889888888765 44555666666554 34455555544545443
No 329
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=81.45 E-value=2.5 Score=29.54 Aligned_cols=47 Identities=6% Similarity=-0.096 Sum_probs=36.7
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEE
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~ 56 (82)
-|++.++.++.++++++.. ++||++++.+ +.+.+.++++.| +|.+.+
T Consensus 250 E~P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 250 EEPIHPLNSDNMQKVSRST-TIPIATGERSYTRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp ECSSCSSCHHHHHHHHHHC-SSCEEECTTCCTTHHHHHHHHTTCCSEECC
T ss_pred ECCCChhhHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 3667777888888888876 6999999998 567888888877 566644
No 330
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=81.38 E-value=5.3 Score=22.43 Aligned_cols=58 Identities=7% Similarity=0.082 Sum_probs=39.1
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++..+++|+.+..+- +.+.+.+....|++.++ .++-++.+-...+++.+
T Consensus 63 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l-----~Kp~~~~~L~~~i~~~~ 121 (133)
T 3b2n_A 63 TGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYV-----LKERSIEELVETINKVN 121 (133)
T ss_dssp CHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEE-----ETTSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEEE-----ECCCCHHHHHHHHHHHH
Confidence 456777788877677887766554 55677888899998875 34456655555555544
No 331
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=81.34 E-value=5 Score=22.09 Aligned_cols=57 Identities=14% Similarity=0.024 Sum_probs=36.9
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++-++++++..+++|+.+..+ -+.+......+.|++.++ .++-++.+-...+++.
T Consensus 61 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~~i~~~ 118 (124)
T 1srr_A 61 DGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHF-----AKPFDIDEIRDAVKKY 118 (124)
T ss_dssp CHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEE-----ESSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhc-----cCCCCHHHHHHHHHHH
Confidence 35666777777667788766655 455667788899998764 3444555544445443
No 332
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=81.17 E-value=3.5 Score=28.35 Aligned_cols=50 Identities=20% Similarity=0.151 Sum_probs=37.4
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTA 59 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~ 59 (82)
-|++.++.++.++++++.. ++||++|+.+ +.+.+.++++.| +|.+.+--.
T Consensus 219 EqP~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 270 (366)
T 1tkk_A 219 EQPVHKDDLAGLKKVTDAT-DTPIMADESVFTPRQAFEVLQTRSADLINIKLM 270 (366)
T ss_dssp ECCSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred ECCCCcccHHHHHHHHhhC-CCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehh
Confidence 4777778888899988876 6999999998 456677777665 777766433
No 333
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=81.16 E-value=1.3 Score=30.40 Aligned_cols=57 Identities=18% Similarity=0.108 Sum_probs=39.8
Q ss_pred CCCCCCCCCCcchHHHHHHHHHhCCCCcEE-EEcCCCcccHHHHHHcCCCEEEEeccc
Q psy11601 4 EPGFGGQKFMQDMMPKVKWLRENYPTLNIE-VDGGVGPNTIDECAKAGANWIVSGTAV 60 (82)
Q Consensus 4 ~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~-~dGGI~~~ni~~~~~~Gad~vv~gs~i 60 (82)
+|...|=|.....+.++.++.+..++-.+. +-.|-+...+..+...|+++++++.+=
T Consensus 160 ~pnIvgiKdssgd~~~~~~~~~~~~~~~f~~v~~G~d~~~~~~~l~~G~~G~is~~an 217 (316)
T 3e96_A 160 LQNLVGVKYAINDLPRFAKVVRSIPEEHQIAWICGTAEKWAPFFWHAGAKGFTSGLVN 217 (316)
T ss_dssp CTTEEEEEECCCCHHHHHHHHTTSCGGGCCEEEETTCTTTHHHHHHHTCCEEEESGGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHHhcCCCCceEEEeCChHHHHHHHHHCCCCEEEechhh
Confidence 355666666666677888777654322455 666766666788889999999999763
No 334
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=80.91 E-value=7.4 Score=23.81 Aligned_cols=58 Identities=16% Similarity=0.097 Sum_probs=39.2
Q ss_pred chHHHHHHHHHhCCCCcEEEEc-CCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDG-GVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dG-GI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++..++.|+.+.. .-+.+.+....+.||+.++. ++-++.+-...++..+
T Consensus 65 ~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~Ga~~~l~-----Kp~~~~~L~~~i~~~~ 123 (215)
T 1a04_A 65 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLL-----KDMEPEDLLKALHQAA 123 (215)
T ss_dssp CHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEE-----TTCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHcCCcEEEe-----CCCCHHHHHHHHHHHH
Confidence 4577788888877777766654 45677788899999998754 4445555555555443
No 335
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=80.88 E-value=5.4 Score=22.95 Aligned_cols=43 Identities=16% Similarity=0.052 Sum_probs=31.7
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEe
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~g 57 (82)
+.++-++++++..+.+|+.+..+ -+.+....+...|++.++.-
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~k 108 (153)
T 3cz5_A 65 GGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTK 108 (153)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEET
T ss_pred CHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEec
Confidence 46777888888777777666554 45677888999999987643
No 336
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=80.84 E-value=5.6 Score=22.31 Aligned_cols=58 Identities=10% Similarity=0.043 Sum_probs=38.6
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++..+++|+.+..+- +.+......++|++.++. ++-++.+-...+++.+
T Consensus 61 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~L~~~i~~~~ 119 (132)
T 3crn_A 61 EGTELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYIM-----KPVNPRDLLEKIKEKL 119 (132)
T ss_dssp BHHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchhhcc-----CCCCHHHHHHHHHHHH
Confidence 456677778877667887766554 566778888999998754 3445555555555444
No 337
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=80.72 E-value=2.8 Score=29.24 Aligned_cols=50 Identities=14% Similarity=0.011 Sum_probs=37.7
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEe
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~g 57 (82)
+--|++.++.++..+++++.. ++||++++.+ +.+.+.++++.| +|.+.+-
T Consensus 219 ~iEqP~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 270 (397)
T 2qde_A 219 KIEQPLPAWDLDGMARLRGKV-ATPIYADESAQELHDLLAIINKGAADGLMIK 270 (397)
T ss_dssp CEECCSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred EEECCCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEe
Confidence 334677777888888888765 6999999998 456777777765 7777664
No 338
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=80.72 E-value=5.4 Score=22.13 Aligned_cols=60 Identities=10% Similarity=0.055 Sum_probs=38.9
Q ss_pred chHHHHHHHHHhC--CCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENY--PTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 15 ~~~~ki~~~~~~~--~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
..++-++++++.. +++|+.+. +.-+.+......++|++.++. ++-++.+-...+++.++.
T Consensus 69 ~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 69 DGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYIT-----KSANLSQLFQIVKGIEEF 131 (140)
T ss_dssp CHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE-----CCSSHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheec-----CCCCHHHHHHHHHHHHHH
Confidence 4667778888754 46776555 445667788899999998743 344555555555555443
No 339
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=80.37 E-value=7.6 Score=23.57 Aligned_cols=56 Identities=11% Similarity=-0.040 Sum_probs=37.2
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
+.++-++++++..+++|+.+..+ -+.+.+....++||+.++. ++-++.+-...++.
T Consensus 62 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~a~~~Ga~~~l~-----Kp~~~~~L~~~i~~ 118 (208)
T 1yio_A 62 SGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIEFLP-----KPFEEQALLDAIEQ 118 (208)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEESCTTSCCCHHHHHTTEEEEEE-----SSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHCCCcEEEe-----CCCCHHHHHHHHHH
Confidence 46777888888777778666554 5567788899999987754 34455444444443
No 340
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=80.31 E-value=1.8 Score=27.34 Aligned_cols=44 Identities=18% Similarity=0.325 Sum_probs=29.4
Q ss_pred cchHHHHHHHHHhCCCCcEEE-EcC-CCcccHHHHHHcCCCEEEEec
Q psy11601 14 QDMMPKVKWLRENYPTLNIEV-DGG-VGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~-dGG-I~~~ni~~~~~~Gad~vv~gs 58 (82)
+..++.|+++++.. +.++.+ .|+ .+.+.+..+.++|||++.+++
T Consensus 43 ~~~~~~i~~i~~~~-~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 43 PQWEQSIPAIVDAY-GDKALIGAGTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp TTHHHHHHHHHHHH-TTTSEEEEECCCSHHHHHHHHHTTCCEEECSS
T ss_pred hhHHHHHHHHHHhC-CCCeEEEeccccCHHHHHHHHHcCCCEEEeCC
Confidence 44567777777654 244333 333 457779999999999998654
No 341
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=80.10 E-value=1.7 Score=30.29 Aligned_cols=50 Identities=12% Similarity=0.051 Sum_probs=39.1
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-----CCEEEEecc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-----ANWIVSGTA 59 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-----ad~vv~gs~ 59 (82)
-|++.++.++.++++++.. ++||++++.+ +.+.+..+++.| +|.+..--.
T Consensus 242 EqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~ 297 (392)
T 1tzz_A 242 EEVGDPLDYALQAALAEFY-PGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCA 297 (392)
T ss_dssp ECCSCTTCHHHHHHHTTTC-CSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTT
T ss_pred cCCCChhhHHHHHHHHhhC-CCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECcc
Confidence 4677778888888888765 6999999998 467788888887 787765433
No 342
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=79.65 E-value=3.2 Score=25.74 Aligned_cols=50 Identities=22% Similarity=0.225 Sum_probs=33.3
Q ss_pred hHHHHHHHHHhCC--CCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCH
Q psy11601 16 MMPKVKWLRENYP--TLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDR 66 (82)
Q Consensus 16 ~~~ki~~~~~~~~--~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~ 66 (82)
.++-++++++..+ ++|+.+.++ ..+.+..+.+.|++.++....-|..++.
T Consensus 40 g~~~~~~l~~~~~~~~i~vi~~~~-~~~~~~~~~~~Ga~~~l~kp~~~~~~~l 91 (237)
T 3cwo_X 40 GIDAIKEIMKIDPNAKIIVCSAMG-QQAMVIEAIKAGAKDFIVNTAAVENPSL 91 (237)
T ss_dssp HHHHHHHHHHHSSSCCEEEECCSS-THHHHHHHHHTTCCEEEESHHHHHCTHH
T ss_pred HHHHHHHHHHhCCCCCEEEEECCC-CHHHHHHHHHCCHHheEeCCcccChHHH
Confidence 4566677776543 355555555 3888899999999999877644444433
No 343
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=79.62 E-value=2.9 Score=29.28 Aligned_cols=49 Identities=4% Similarity=-0.041 Sum_probs=37.0
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
+--|++.++.++..+++++.. ++||++++.+. .+.+.++++.| +|.+.+
T Consensus 250 ~iEqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 300 (398)
T 2pp0_A 250 WIEEPLDAYDIEGHAQLAAAL-DTPIATGEMLTSFREHEQLILGNASDFVQP 300 (398)
T ss_dssp CEECCSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred eeeCCCChhhHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 334677778888888888876 69999999984 57777777776 666644
No 344
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=79.56 E-value=5.9 Score=21.85 Aligned_cols=57 Identities=14% Similarity=0.110 Sum_probs=36.9
Q ss_pred chHHHHHHHHHhCCCCcEE-EEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIE-VDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~-~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++.. +.|+. +.+.-+.+......+.||+.++. ++-++.+-...+++.+
T Consensus 60 ~g~~~~~~lr~~~-~~~ii~~t~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~l~~~i~~~l 117 (120)
T 3f6p_A 60 DGVEVCREVRKKY-DMPIIMLTAKDSEIDKVIGLEIGADDYVT-----KPFSTRELLARVKANL 117 (120)
T ss_dssp HHHHHHHHHHTTC-CSCEEEEEESSCHHHHHHHHHTTCCEEEE-----ESCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcC-CCCEEEEECCCChHHHHHHHhCCcceeEc-----CCCCHHHHHHHHHHHH
Confidence 4566677777654 56654 45555666777889999988754 4556665556665554
No 345
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=79.54 E-value=4.1 Score=25.40 Aligned_cols=58 Identities=7% Similarity=-0.063 Sum_probs=38.0
Q ss_pred chHHHHHHHHH-hCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRE-NYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~-~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++ ..|++|+.+..+ -+.+....+..+||+.++ .++-++.+-...++..+
T Consensus 68 ~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l-----~Kp~~~~~L~~~i~~~~ 127 (225)
T 3klo_A 68 DVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVF-----YIDDDMDTLIKGMSKIL 127 (225)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECTTCCHHHHTTSTTEEEEE-----ETTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhCCCCcEEEEECCcchhHHHHHHHhCCCEEE-----ecCCCHHHHHHHHHHHH
Confidence 45677888887 677888665544 455566777788987764 45556665555555544
No 346
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=79.45 E-value=6.2 Score=22.05 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=38.9
Q ss_pred chHHHHHHHHHh-CCCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN-YPTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~-~~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++. .+++|+.+. +.-+.+....+.++|++.++. ++-++.+-...+++..
T Consensus 66 ~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~~~i~~~~ 125 (136)
T 3hdv_A 66 SGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLL-----KPVDLGKLLELVNKEL 125 (136)
T ss_dssp CHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEe-----CCCCHHHHHHHHHHHh
Confidence 467778888876 567776554 445667788899999998754 4445555555555444
No 347
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=79.38 E-value=10 Score=24.35 Aligned_cols=57 Identities=14% Similarity=0.014 Sum_probs=36.3
Q ss_pred chHHHHHHHHHhCCCCcEEE-EcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEV-DGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~-dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++-++++++..+++||.+ .+..+.+....+.++|++.++ .++-++.+-.+.+++.
T Consensus 187 ~G~~l~~~ir~~~~~~piI~lt~~~~~~~~~~~~~~G~~~~l-----~KP~~~~~L~~~l~~~ 244 (254)
T 2ayx_A 187 DGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCL-----SKPVTLDVIKQTLTLY 244 (254)
T ss_dssp CCHHHHHHHHHHHCCSCEEEEESSTTSHHHHHHHHCCCEEEE-----ESSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCcEEEEECCCCHHHHHHHHHcCCceEE-----ECCCCHHHHHHHHHHH
Confidence 35666777777656677655 455667788899999998774 3444544444444433
No 348
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=79.34 E-value=5.8 Score=21.59 Aligned_cols=60 Identities=18% Similarity=0.126 Sum_probs=40.0
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
+.++-++++++..+++|+.+..+ -+.+......+.|++.++. ++-++.+-...+++.++.
T Consensus 58 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~~i~~~~~~ 118 (121)
T 2pl1_A 58 DGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVT-----KPFHIEEVMARMQALMRR 118 (121)
T ss_dssp CHHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHHcCccceEE-----CCCCHHHHHHHHHHHHHh
Confidence 45677777887666777666554 5566778889999998754 455666555556555443
No 349
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.30 E-value=6.6 Score=22.25 Aligned_cols=58 Identities=7% Similarity=0.057 Sum_probs=37.5
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++..+++|+.+..+ -+.+......++|++.++. ++-++.+-...++..+
T Consensus 62 ~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~L~~~i~~~~ 120 (137)
T 3cfy_A 62 SGEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLE-----KPINADRLKTSVALHL 120 (137)
T ss_dssp BHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHHCCccEEEe-----CCCCHHHHHHHHHHHH
Confidence 45667777887766777666655 4566778889999997754 4445554444444433
No 350
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=79.21 E-value=4.2 Score=28.47 Aligned_cols=53 Identities=8% Similarity=-0.150 Sum_probs=39.7
Q ss_pred CCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecccc
Q psy11601 8 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 8 ~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
--|++.++.++.++++++.. ++||.+++.+. .+.+..+++.| +|.+..--.-.
T Consensus 232 iEeP~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~ 286 (394)
T 3mqt_A 232 IEACLQHDDLIGHQKLAAAI-NTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRC 286 (394)
T ss_dssp EESCSCTTCHHHHHHHHHHS-SSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTS
T ss_pred EECCCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCCeEecCcccc
Confidence 35777788888899998876 69999999987 57777887765 77765544433
No 351
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=79.12 E-value=3.7 Score=28.24 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=36.5
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEe
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~g 57 (82)
-|++.++.++..+++++.. ++||++|+.+ +.+.+.++++.| +|.+.+-
T Consensus 214 E~P~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 263 (368)
T 1sjd_A 214 EQPLEEEDVLGHAELARRI-QTPICLDESIVSARAAADAIKLGAVQIVNIK 263 (368)
T ss_dssp ECCSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred eCCCChhhHHHHHHHHHhC-CCCEEECCCcCCHHHHHHHHHcCCCCEEEec
Confidence 4677777888888888875 6899999997 457777877776 6766553
No 352
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=78.98 E-value=3.6 Score=28.42 Aligned_cols=50 Identities=14% Similarity=0.070 Sum_probs=37.8
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEe
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~g 57 (82)
+--|++.++.++.++++++.. ++||++|+.+ +.+.+..+++.| +|.+.+-
T Consensus 218 ~iEqP~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 218 YIEQPLAWDDLVDHAELARRI-RTPLCLDESVASASDARKALALGAGGVINLK 269 (375)
T ss_dssp CEECCSCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHHTSCSEEEEC
T ss_pred EEECCCCcccHHHHHHHHHhC-CCCEEecCccCCHHHHHHHHHhCCCCEEEEC
Confidence 345778788888888888875 5899999997 456777777776 6776663
No 353
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=78.97 E-value=6.7 Score=22.12 Aligned_cols=41 Identities=10% Similarity=-0.193 Sum_probs=29.2
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEE
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVS 56 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~ 56 (82)
+.++-++++++..+..+|.+..+- .+......+.|++.++.
T Consensus 69 ~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~g~~~~l~ 109 (143)
T 2qv0_A 69 DGVLLAQNISQFAHKPFIVFITAW-KEHAVEAFELEAFDYIL 109 (143)
T ss_dssp CHHHHHHHHTTSTTCCEEEEEESC-CTTHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHccCCCceEEEEeCC-HHHHHHHHhCCcceEEe
Confidence 456667777776556667766664 56788888999987754
No 354
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=78.95 E-value=2.7 Score=29.26 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=36.5
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
-|++.++.++..+++++.. ++||++++.+. .+.+.++++.| +|.+.+
T Consensus 217 EqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 265 (382)
T 2gdq_A 217 EEPLPFDQPQDYAMLRSRL-SVPVAGGENMKGPAQYVPLLSQRCLDIIQP 265 (382)
T ss_dssp ECCSCSSCHHHHHHHHTTC-SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred ECCCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 4677777888888888875 69999999984 67788888776 666644
No 355
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=78.68 E-value=3.7 Score=28.23 Aligned_cols=50 Identities=14% Similarity=0.152 Sum_probs=37.7
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEe
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~g 57 (82)
+--|++.++.++..+++++.. ++||++|+.+ +.+.+..+++.| +|.+..-
T Consensus 211 ~iEqP~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 262 (369)
T 2zc8_A 211 YIEQPLAYDDLLDHAKLQREL-STPICLDESLTGAEKARKAIELGAGRVFNVK 262 (369)
T ss_dssp CEECCSCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred EEECCCCcccHHHHHHHHhhC-CCCEEEcCccCCHHHHHHHHHhCCCCEEEEc
Confidence 344777777888888888875 5899999997 457777887777 6766553
No 356
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=78.66 E-value=2.6 Score=28.36 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=30.9
Q ss_pred CCcEEEEcCCCcccHHHHH-HcCCCEEEEeccccCC
Q psy11601 29 TLNIEVDGGVGPNTIDECA-KAGANWIVSGTAVINC 63 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~-~~Gad~vv~gs~i~~~ 63 (82)
+++|.-=|+++++|+.++. +.++|++-+|++-.++
T Consensus 203 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~ 238 (249)
T 3th6_A 203 KVRIQYGGSVNAGNCKELGRKPDIDGFLVGGASLKP 238 (249)
T ss_dssp HCCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGST
T ss_pred cccEEEcCccCHhHHHHHhcCCCCCEEEeehHhhhH
Confidence 4789999999999999876 5889999999987765
No 357
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=78.39 E-value=6.8 Score=21.90 Aligned_cols=59 Identities=10% Similarity=0.066 Sum_probs=39.1
Q ss_pred chHHHHHHHHH--hCCCCcEEEEc-CCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRE--NYPTLNIEVDG-GVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~--~~~~~~i~~dG-GI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++ ..+++|+.+.. .-+.+......+.|++.++. ++-++.+-...++..++
T Consensus 68 ~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~l~~~i~~~~~ 129 (143)
T 3cnb_A 68 DGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFG-----KPLNFTLLEKTIKQLVE 129 (143)
T ss_dssp CHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEe-----CCCCHHHHHHHHHHHHH
Confidence 45677788887 45677866554 45566678888999998753 44466655566665554
No 358
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=78.16 E-value=7.1 Score=21.95 Aligned_cols=60 Identities=8% Similarity=0.121 Sum_probs=37.9
Q ss_pred chHHHHHHHHHhC--CCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENY--PTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 15 ~~~~ki~~~~~~~--~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
..++-++++++.. +++|+.+. +.-+.+......++|++.++. ++-++.+-...+++.++.
T Consensus 76 ~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~l~~~i~~~~~~ 138 (149)
T 1k66_A 76 DGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIV-----KPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp CHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE-----CCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEe-----CCCCHHHHHHHHHHHHHH
Confidence 4566777777654 45675555 445567788899999998754 344555545555554443
No 359
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=78.08 E-value=2.7 Score=29.38 Aligned_cols=49 Identities=8% Similarity=0.041 Sum_probs=37.2
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
+--|++.++.++..+++++.. ++||++++.+. .+.+.++++.| +|.+.+
T Consensus 245 ~iE~P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 245 YYEEPVMPLNPAQMKQVADKV-NIPLAAGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp CEECSSCSSSHHHHHHHHHHC-CSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred EEeCCCChhhHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 334677778888899988876 69999999984 57778888777 566544
No 360
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=77.96 E-value=3.9 Score=27.14 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=31.3
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-------cccHHHHHHcCCCEEEEecc
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-------PNTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-------~~ni~~~~~~Gad~vv~gs~ 59 (82)
.++-++++++...++|+.+.+-.+ .+-++.+.++|+|++++...
T Consensus 81 ~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~ 131 (268)
T 1qop_A 81 CFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADV 131 (268)
T ss_dssp HHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTC
T ss_pred HHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCC
Confidence 345678888874468887765334 36677899999998887633
No 361
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=77.90 E-value=3.1 Score=27.96 Aligned_cols=45 Identities=11% Similarity=-0.015 Sum_probs=32.0
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC-------cccHHHHHHcCCCEEEEecccc
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG-------PNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~-------~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
.++-++++|+. .++|+.+.|=.| .+-++.+.++|+|++++...-+
T Consensus 79 ~~~~v~~ir~~-~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ 130 (271)
T 1ujp_A 79 ALELVREVRAL-TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPP 130 (271)
T ss_dssp HHHHHHHHHHH-CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCG
T ss_pred HHHHHHHHHhc-CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCH
Confidence 46678888887 578988875222 3456779999999888764433
No 362
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=77.82 E-value=5.2 Score=27.66 Aligned_cols=50 Identities=18% Similarity=0.160 Sum_probs=38.2
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEe
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~g 57 (82)
+--|++.++.++.++++++.. ++||++++.+. .+.+..+++.| +|.+..-
T Consensus 215 ~iEqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 266 (367)
T 3dg3_A 215 FAEELCPADDVLSRRRLVGQL-DMPFIADESVPTPADVTREVLGGSATAISIK 266 (367)
T ss_dssp CEESCSCTTSHHHHHHHHHHC-SSCEEECTTCSSHHHHHHHHHHTSCSEEEEC
T ss_pred EEECCCCcccHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEEee
Confidence 345778888888888888875 69999999985 56777777776 6777654
No 363
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=77.74 E-value=4.8 Score=27.48 Aligned_cols=55 Identities=18% Similarity=0.184 Sum_probs=36.5
Q ss_pred HHHHHHHHHhCCC-CcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHH
Q psy11601 17 MPKVKWLRENYPT-LNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLK 74 (82)
Q Consensus 17 ~~ki~~~~~~~~~-~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~ 74 (82)
.+-++++++..|+ .+|.+.=- |.+.+.+..++|||.+.+.. |..++.++.++.++
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV~-tleea~eA~~aGaD~I~LDn--~~~e~l~~av~~l~ 235 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEVE-NLEDALRAVEAGADIVMLDN--LSPEEVKDISRRIK 235 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEES-SHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEeC-CHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhh
Confidence 3446667776654 45666532 67888889999999998887 54455555555443
No 364
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=77.47 E-value=3.6 Score=28.92 Aligned_cols=51 Identities=2% Similarity=0.007 Sum_probs=39.3
Q ss_pred CCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcCCCEEEEecc
Q psy11601 8 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 8 ~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~ 59 (82)
--|++.++.++.++++++.. ++||.++..+. .+.+..+++.|+|.+..--.
T Consensus 222 iEqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~d~v~~k~~ 273 (393)
T 4dwd_A 222 FEEPVQHYHVGAMGEVAQRL-DITVSAGEQTYTLQALKDLILSGVRMVQPDIV 273 (393)
T ss_dssp EECCSCTTCHHHHHHHHHHC-SSEEEBCTTCCSHHHHHHHHHHTCCEECCCTT
T ss_pred EECCCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCEEEeCcc
Confidence 35778788888899988875 69999999876 56777888778888765433
No 365
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=77.22 E-value=8.3 Score=22.28 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=38.8
Q ss_pred chHHHHHHHHHhC--CCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENY--PTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~--~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++.. +++|+.+. +--+.+.+..+.++|++.++ .++-++.+-...+++.++
T Consensus 65 ~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 65 DGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFI-----TKPCKDVVLASHVKRLLS 126 (154)
T ss_dssp CHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEE-----ESSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEE-----eCCCCHHHHHHHHHHHHH
Confidence 4567777777752 56776554 44667778899999999774 345566655555555544
No 366
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=77.22 E-value=2.6 Score=29.45 Aligned_cols=47 Identities=4% Similarity=-0.150 Sum_probs=35.9
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
-|++.++.++.++++++.. ++||++++.+. .+.+.++++.| +|.+.+
T Consensus 241 E~P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 289 (403)
T 2ox4_A 241 EEINTPLNPRLLKEAKKKI-DIPLASGERIYSRWGFLPFLEDRSIDVIQP 289 (403)
T ss_dssp ECCSCTTSTHHHHHHHHTC-CSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred eCCCChhhHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 3667777888888888875 69999999984 57788888776 666643
No 367
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=77.10 E-value=2.6 Score=29.36 Aligned_cols=47 Identities=15% Similarity=-0.026 Sum_probs=36.3
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
-|++.++.++.++++++.. ++||++++.+. ++.+.++++.| +|.+.+
T Consensus 231 E~P~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 279 (392)
T 2poz_A 231 EEPCDPFDNGALKVISEQI-PLPIAVGERVYTRFGFRKIFELQACGIIQP 279 (392)
T ss_dssp ECCSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHTTTCCSEECC
T ss_pred ECCCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 4667777888888888875 69999999984 57788888777 666644
No 368
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=76.91 E-value=8 Score=21.90 Aligned_cols=59 Identities=10% Similarity=0.094 Sum_probs=37.9
Q ss_pred chHHHHHHHHH--hCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRE--NYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~--~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++ ..+++|+.+..+ -+.+....+.+.|++.++. ++-++.+-...++..++
T Consensus 66 ~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~L~~~i~~~~~ 127 (147)
T 2zay_A 66 SGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIA-----KPVNAIRLSARIKRVLK 127 (147)
T ss_dssp CHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEe-----CCCCHHHHHHHHHHHHH
Confidence 45677788887 456677665554 5666778889999998743 34455554455544443
No 369
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=76.64 E-value=2.9 Score=27.64 Aligned_cols=49 Identities=18% Similarity=0.329 Sum_probs=31.7
Q ss_pred hHHHHHHHHH----hCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCH
Q psy11601 16 MMPKVKWLRE----NYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDR 66 (82)
Q Consensus 16 ~~~ki~~~~~----~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~ 66 (82)
.+++++++++ ..+++ -..++|-|.+ +....+.|++.+=+||+||+..++
T Consensus 180 ~f~~l~~l~~~l~~~~~~~-~~LSmGmS~d-~~~Ai~~G~t~vRvGt~iFg~r~y 232 (245)
T 3sy1_A 180 VARQMAVAFAGLKTRYPHI-DTLALGQSDD-MEAAIAAGSTMVAIGTAIFGARDY 232 (245)
T ss_dssp HHHHHHHHHHHHHTTSTTC-CEEECCCSTT-HHHHHHHTCCEEEESHHHHCC---
T ss_pred HHHHHHHHHHHHHHhCCCC-CEEeccCcHh-HHHHHHcCCCEEECchHHhCCCCC
Confidence 4566666543 23333 3667776766 455568999999999999987654
No 370
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=76.54 E-value=3.3 Score=34.33 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=29.7
Q ss_pred CCCcEEEEcCCC-cccHHHHHHcCCCEEEEecccc
Q psy11601 28 PTLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 28 ~~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
.++||.++|||. ...+...+..||+.+-+|++.+
T Consensus 1063 ~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL 1097 (1479)
T 1ea0_A 1063 HRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASL 1097 (1479)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHH
T ss_pred CCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHH
Confidence 469999999997 6778889999999999998853
No 371
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=76.37 E-value=9.3 Score=22.41 Aligned_cols=42 Identities=12% Similarity=0.157 Sum_probs=30.3
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcc---cHHHHHHcCCCEEEEe
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPN---TIDECAKAGANWIVSG 57 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~---ni~~~~~~Gad~vv~g 57 (82)
+.++-++++++..+ .++.+..+-..+ .+....++|++.++.=
T Consensus 85 ~g~~l~~~lr~~~~-~~ii~~s~~~~~~~~~~~~~~~~ga~~~l~K 129 (164)
T 3t8y_A 85 NGIEALKLIMKKAP-TRVIMVSSLTEEGAAITIEALRNGAVDFITK 129 (164)
T ss_dssp CHHHHHHHHHHHSC-CEEEEEESSCCTTCHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHhcCC-ceEEEEecCCccchHHHHHHHHcCcCEEEeC
Confidence 45677788888765 777776665544 4668899999988653
No 372
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=76.30 E-value=7.2 Score=24.11 Aligned_cols=43 Identities=19% Similarity=0.156 Sum_probs=30.8
Q ss_pred chHHHHHHHHHh----CCCCcEEEEcCC--CcccHHHHHHcCCCEEEEe
Q psy11601 15 DMMPKVKWLREN----YPTLNIEVDGGV--GPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 15 ~~~~ki~~~~~~----~~~~~i~~dGGI--~~~ni~~~~~~Gad~vv~g 57 (82)
+.++-++++++. .+++||.+..+- +.+.+.+..++|++.++.=
T Consensus 133 ~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~K 181 (206)
T 3mm4_A 133 DGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDK 181 (206)
T ss_dssp CHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEET
T ss_pred CHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcC
Confidence 456666777664 467887777665 4577888999999988754
No 373
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=76.25 E-value=11 Score=23.11 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=40.4
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+..+ -+.+.......+||+.++. ++-++.+-...++..++
T Consensus 57 ~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~L~~~i~~~~~ 116 (220)
T 1p2f_A 57 SGYEICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVT-----KPFNPEILLARVKRFLE 116 (220)
T ss_dssp BHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHcCCCEEEE-----CCCCHHHHHHHHHHHHc
Confidence 46777888888767788666655 4566778889999998743 44566655555555544
No 374
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=75.97 E-value=7 Score=27.74 Aligned_cols=52 Identities=8% Similarity=0.085 Sum_probs=39.4
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecc
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTA 59 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~ 59 (82)
+--|++.++.++.++++++.. ++||++++.+. .+.+.++++.| +|.+..--.
T Consensus 252 ~iEqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~ 305 (422)
T 3tji_A 252 FIEDILPPQQSAWLEQVRQQS-CVPLALGELFNNPAEWHDLIVNRRIDFIRCHVS 305 (422)
T ss_dssp EEECCSCGGGGGGHHHHHHHC-CCCEEECTTCCSGGGTHHHHHTTCCSEECCCGG
T ss_pred eEECCCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHhcCCCCEEecCcc
Confidence 335777777888888888876 68999999987 67888888876 676655433
No 375
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=75.80 E-value=7.9 Score=27.57 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=37.0
Q ss_pred CCCcEEEEcCCCcccHHHH-HHcCCCEEEEe-ccccC-CCCHHHHHHHHHHHHHHhh
Q psy11601 28 PTLNIEVDGGVGPNTIDEC-AKAGANWIVSG-TAVIN-CPDRIQAISTLKSSVQKYL 81 (82)
Q Consensus 28 ~~~~i~~dGGI~~~ni~~~-~~~Gad~vv~g-s~i~~-~~d~~~~~~~l~~~~~~~~ 81 (82)
+++-=++.||++...++++ ...|-|.+..- ..+++ ++.+++-++.+++.++...
T Consensus 312 ~~~~PV~SGGih~~~~p~l~~~~G~Dvvl~~GGG~~gHP~G~~aGa~a~rqA~ea~~ 368 (378)
T 3qfw_A 312 NACIPTPAGGIMLQRVNELLRFYGQDVMLLIGGSLLASRERLTEQASRFVNKVADYG 368 (378)
T ss_dssp CCCEEEEESSCCGGGHHHHHHHHCSSCEEEC---------CHHHHHHHHHHHHHHTT
T ss_pred CCeEEeecCCCCHHHHHHHHHHhCCcEEEecCccccCCCCCcHHHHHHHHHHHHHHH
Confidence 3455678999999999864 55788877664 77998 6689999999999987643
No 376
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=75.65 E-value=8 Score=21.27 Aligned_cols=59 Identities=19% Similarity=0.143 Sum_probs=37.3
Q ss_pred chHHHHHHHHHh--CCCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN--YPTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~--~~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++. .+++|+.+. +.-+.+.+....+.|++.++ .++-++.+-...+++.++
T Consensus 63 ~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l-----~KP~~~~~l~~~i~~~~~ 124 (128)
T 1jbe_A 63 DGLELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYV-----VKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp CHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCcee-----ecCCCHHHHHHHHHHHHH
Confidence 356667777763 345676555 44566778889999999764 445566555555555543
No 377
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=75.53 E-value=16 Score=25.23 Aligned_cols=59 Identities=20% Similarity=0.169 Sum_probs=39.8
Q ss_pred chHHHHHHHHHhCCCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++||.+. |--+.+...+..+.||+.++ .++-++.+-...+++.++
T Consensus 58 dG~ell~~lr~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~~yl-----~KP~~~~~L~~~i~~~l~ 117 (368)
T 3dzd_A 58 DGVNFIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFL-----EKPFSVERFLLTIKHAFE 117 (368)
T ss_dssp ETTTHHHHHHHHCTTCEEEEEECSSCCHHHHHHHHHTCCEEE-----ESSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHhcCcceEE-----eCCCCHHHHHHHHHHHHH
Confidence 345666777777677776654 44567888899999998764 455566655555555544
No 378
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=75.51 E-value=10 Score=22.51 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=31.4
Q ss_pred HHHHHHhCC-CCcEEEEcCC--CcccHH----HHHHcCCCEEEEeccccC-CCCHHHHHHHHHHHH
Q psy11601 20 VKWLRENYP-TLNIEVDGGV--GPNTID----ECAKAGANWIVSGTAVIN-CPDRIQAISTLKSSV 77 (82)
Q Consensus 20 i~~~~~~~~-~~~i~~dGGI--~~~ni~----~~~~~Gad~vv~gs~i~~-~~d~~~~~~~l~~~~ 77 (82)
++++++... ++++.+-|.. ..+... .+.+.|+|.+ |. ..++.+.++++++.+
T Consensus 75 i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~------~~~g~~~~~~~~~l~~~~ 134 (137)
T 1ccw_A 75 RQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRV------YAPGTPPEVGIADLKKDL 134 (137)
T ss_dssp HHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEE------CCTTCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEE------ECCCCCHHHHHHHHHHHh
Confidence 444555432 5777655542 345543 4899999866 43 346777777777655
No 379
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=75.43 E-value=8.7 Score=21.60 Aligned_cols=56 Identities=21% Similarity=0.201 Sum_probs=35.0
Q ss_pred chHHHHHHHHHh-CCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN-YPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 15 ~~~~ki~~~~~~-~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
+.++-++++++. .+..||.+..+ -+.+......++||+.++ .++-++.+-...+++
T Consensus 66 ~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l-----~KP~~~~~L~~~l~~ 123 (133)
T 2r25_B 66 DGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFL-----SKPIKRPKLKTILTE 123 (133)
T ss_dssp CHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHH
T ss_pred ChHHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHcCCCEEE-----eCCCCHHHHHHHHHH
Confidence 456777778763 44567665544 566677889999998775 344455444444443
No 380
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=75.31 E-value=5.6 Score=27.89 Aligned_cols=54 Identities=9% Similarity=0.111 Sum_probs=39.2
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecccc
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
+--|++.++.++.++++++.. ++||.+++.+. .+.+..+++.| +|.+..--.-.
T Consensus 231 ~iEqP~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~ 286 (401)
T 3sbf_A 231 FIEDILPPNQTEWLDNIRSQS-SVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQI 286 (401)
T ss_dssp CEECSSCTTCGGGHHHHHTTC-CCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGG
T ss_pred EEECCCChhHHHHHHHHHhhC-CCCEEeCCccCCHHHHHHHHhcCCCCEEecCcccc
Confidence 345777777788888888875 68999999987 57778888776 67665544333
No 381
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=75.31 E-value=11 Score=26.19 Aligned_cols=40 Identities=30% Similarity=0.436 Sum_probs=30.4
Q ss_pred HHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccc
Q psy11601 20 VKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAV 60 (82)
Q Consensus 20 i~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i 60 (82)
|+.+++..+++||.+|-- +.+.++..+++|+++|=..|+.
T Consensus 108 I~~l~~~~~~vpISIDT~-~~~VaeaAl~aGa~iINDVsg~ 147 (318)
T 2vp8_A 108 IEWLRGAYPDQLISVDTW-RAQVAKAACAAGADLINDTWGG 147 (318)
T ss_dssp HHHHHHHSTTCEEEEECS-CHHHHHHHHHHTCCEEEETTSS
T ss_pred HHHHHhhCCCCeEEEeCC-CHHHHHHHHHhCCCEEEECCCC
Confidence 344555555789999976 8889999999999977666654
No 382
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=75.10 E-value=8 Score=26.88 Aligned_cols=52 Identities=19% Similarity=0.127 Sum_probs=38.9
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecccc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
-|++.++.++.++++++.. ++||++++.+. .+.+..+++.| +|.+..--.-.
T Consensus 226 EqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~ 279 (383)
T 3i4k_A 226 EQPTPADDLETLREITRRT-NVSVMADESVWTPAEALAVVKAQAADVIALKTTKH 279 (383)
T ss_dssp ESCSCTTCHHHHHHHHHHH-CCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTT
T ss_pred ECCCChhhHHHHHHHHhhC-CCCEEecCccCCHHHHHHHHHcCCCCEEEEccccc
Confidence 4778787888888888765 58999999875 56777888776 77776654444
No 383
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=75.04 E-value=13 Score=23.59 Aligned_cols=58 Identities=17% Similarity=0.013 Sum_probs=38.9
Q ss_pred chHHHHHHHHHhCCCCcEEEEc-CCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDG-GVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dG-GI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++ .+++||.+.. --+.+.+.+..++||+.++. ++-++.+-...++..++
T Consensus 95 ~G~~l~~~lr~-~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~-----Kp~~~~~L~~~i~~~l~ 153 (249)
T 3q9s_A 95 DGGDVVQRLRK-NSALPIIVLTARDTVEEKVRLLGLGADDYLI-----KPFHPDELLARVKVQLR 153 (249)
T ss_dssp HHHHHHHHHHT-TCCCCEEEEESCCSHHHHHHHHHHTCSEEEE-----SSCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHc-CCCCCEEEEECCCCHHHHHHHHHCCCcEEEE-----CCCCHHHHHHHHHHHHh
Confidence 45667777777 4667765554 45567788999999998754 45566666666665543
No 384
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=75.01 E-value=10 Score=26.10 Aligned_cols=46 Identities=11% Similarity=0.076 Sum_probs=33.8
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEeccccC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~~ 62 (82)
.++.++++++.. ++||++++.+ +++.+.++++.| +|.+.+--.-.+
T Consensus 225 ~~~~~~~l~~~~-~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~G 272 (379)
T 2rdx_A 225 SYEECQQVRRVA-DQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLG 272 (379)
T ss_dssp SHHHHHHHHTTC-CSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTT
T ss_pred CHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccC
Confidence 677777887765 6999999998 457777777766 787777554443
No 385
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=74.80 E-value=3.5 Score=22.42 Aligned_cols=40 Identities=10% Similarity=-0.021 Sum_probs=27.2
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEE
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIV 55 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv 55 (82)
+.++-++++++..++.|+.+..+-.... ......|++.++
T Consensus 59 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~g~~~~l 98 (116)
T 3a10_A 59 SGLEVAGEIRKKKKDAKIILLTAYSHYR-SDMSSWAADEYV 98 (116)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEESCGGGG-GCGGGGGSSEEE
T ss_pred CHHHHHHHHHccCCCCeEEEEECCcchH-HHHHhccccceE
Confidence 4566677787776678877776654444 566678888764
No 386
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=74.73 E-value=5.6 Score=28.16 Aligned_cols=48 Identities=8% Similarity=-0.144 Sum_probs=37.2
Q ss_pred CCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 8 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 8 ~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
--|++.++.++.++++++.. ++||.+++.+. .+.+.++++.| +|.+..
T Consensus 261 iEeP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~li~~~a~D~v~i 310 (412)
T 3stp_A 261 LEEPVIADDVAGYAELNAMN-IVPISGGEHEFSVIGCAELINRKAVSVLQY 310 (412)
T ss_dssp EECCSCTTCHHHHHHHHHTC-SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred EECCCCcccHHHHHHHHhCC-CCCEEeCCCCCCHHHHHHHHHcCCCCEEec
Confidence 34778888888999998875 69999999976 56778888776 666643
No 387
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=74.56 E-value=4.9 Score=28.14 Aligned_cols=47 Identities=9% Similarity=0.068 Sum_probs=35.7
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEE
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~ 56 (82)
-|++.++.++-.+++++.. ++||++++.+ +.+.+.++++.| +|.+.+
T Consensus 242 EeP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 242 EEPTPPENLDALAEVRRST-STPICAGENVYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp ECCSCTTCHHHHHHHHTTC-SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred ECCCChhhHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 4667777888888888765 6999999998 457788888776 566533
No 388
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=74.50 E-value=7.3 Score=27.19 Aligned_cols=52 Identities=10% Similarity=0.155 Sum_probs=38.4
Q ss_pred CCCCCcchHHHHHHHH-HhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecccc
Q psy11601 9 GQKFMQDMMPKVKWLR-ENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~-~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
-|++.++.++.+++++ +.. ++||.+++.+. .+.+..+++.| +|.+..--.-.
T Consensus 227 EqP~~~~d~~~~~~l~~~~~-~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~ 281 (389)
T 3ozy_A 227 EEPLSIDDIEGHRILRAQGT-PVRIATGENLYTRNAFNDYIRNDAIDVLQADASRA 281 (389)
T ss_dssp ESCSCTTCHHHHHHHHTTCC-SSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTS
T ss_pred ECCCCcccHHHHHHHHhcCC-CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 4778788888899998 765 69999999986 46677777765 67665544443
No 389
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=74.49 E-value=4.8 Score=28.56 Aligned_cols=49 Identities=12% Similarity=0.094 Sum_probs=37.6
Q ss_pred CCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEe
Q psy11601 8 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 8 ~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~g 57 (82)
--|++.++.++.++++++.. ++||++++.+. .+.+..+++.| +|.+..-
T Consensus 257 iEqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k 307 (424)
T 3v3w_A 257 MEDAVPAENQESFKLIRQHT-TTPLAVGEVFNSIHDCRELIQNQWIDYIRTT 307 (424)
T ss_dssp EECCSCCSSTTHHHHHHHHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCC
T ss_pred EECCCChHhHHHHHHHHhhC-CCCEEEccCcCCHHHHHHHHHcCCCCeEeec
Confidence 34677777788888888875 69999999986 68888888877 5665443
No 390
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=74.48 E-value=4.9 Score=22.69 Aligned_cols=58 Identities=10% Similarity=0.034 Sum_probs=32.5
Q ss_pred hHHHHHHHHHhC--CCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENY--PTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 16 ~~~ki~~~~~~~--~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
.++-++++++.. +++|+.+. +.-+.+.+.+..++|++.++ .++-++.+-...++..++
T Consensus 61 g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~~i~~~~~ 121 (140)
T 3n53_A 61 SPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYL-----TKPFNRNDLLSRIEIHLR 121 (140)
T ss_dssp --CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEE-----ESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeee-----eCCCCHHHHHHHHHHHHh
Confidence 445566666654 56776554 44556677778889988764 444566655555655543
No 391
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=74.40 E-value=9.6 Score=26.02 Aligned_cols=45 Identities=13% Similarity=0.172 Sum_probs=37.8
Q ss_pred chHHHHHHHHHhCCCCcEEEEc--CCCcccHHHHHHcCCCEEEEeccc
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDG--GVGPNTIDECAKAGANWIVSGTAV 60 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dG--GI~~~ni~~~~~~Gad~vv~gs~i 60 (82)
-.+++|+++++.. ++|++.=| |+..+.+++..+.|+.-+=+.+.+
T Consensus 189 Ld~~~L~~I~~~~-~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl 235 (286)
T 1gvf_A 189 IDFQRLAEIREVV-DVPLVLHGASDVPDEFVRRTIELGVTKVNVATEL 235 (286)
T ss_dssp CCHHHHHHHHHHC-CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHH
T ss_pred cCHHHHHHHHHhc-CCCEEEECCCCCCHHHHHHHHHCCCeEEEEChHH
Confidence 3467778888776 58999999 789999999999999998888776
No 392
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=74.24 E-value=17 Score=24.47 Aligned_cols=45 Identities=16% Similarity=0.180 Sum_probs=34.0
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccC
Q psy11601 17 MPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
.+.++++.+.. ++|+.+..+-..-+..+|.+.|++.++.+...|.
T Consensus 193 ~~~~~~i~~~~-~~P~n~~~~~~~~~~~eL~~lGv~~v~~~~~~~r 237 (275)
T 2ze3_A 193 SQDIRALADAL-RVPLNVMAFPGSPVPRALLDAGAARVSFGQSLML 237 (275)
T ss_dssp HHHHHHHHHHC-SSCEEEECCTTSCCHHHHHHTTCSEEECTTHHHH
T ss_pred HHHHHHHHHhc-CCCEEEecCCCCCCHHHHHHcCCcEEEEChHHHH
Confidence 35566666655 4787777665566789999999999999988774
No 393
>5rub_A Rubisco (ribulose-1,5-bisphosphate carboxylase(slash)oxygenase); lyase(carbon-carbon); 1.70A {Rhodospirillum rubrum} SCOP: c.1.14.1 d.58.9.1 PDB: 1rus_A 2rus_A 9rub_A* 1rba_A
Probab=74.18 E-value=8.5 Score=28.37 Aligned_cols=51 Identities=16% Similarity=0.257 Sum_probs=39.8
Q ss_pred CCcEEEEcCCCcccHHH-HHHcCC-CEE-EEeccccC-CCCHHHHHHHHHHHHHH
Q psy11601 29 TLNIEVDGGVGPNTIDE-CAKAGA-NWI-VSGTAVIN-CPDRIQAISTLKSSVQK 79 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~-~~~~Ga-d~v-v~gs~i~~-~~d~~~~~~~l~~~~~~ 79 (82)
++-=++.|||+...+++ +...|- |.+ ..|..+++ ++.++.-+..+|+.++.
T Consensus 386 ~v~PV~SGGih~g~~p~l~~~~G~~Dvi~~~GGGi~GHP~G~aAGa~A~RqA~eA 440 (490)
T 5rub_A 386 ACTPIISGGMNALRMPGFFENLGNANVILTAGGGAFGHIDGPVAGARSLRQAWQA 440 (490)
T ss_dssp CCEEEEEECCCTTTHHHHHHHHSCCCCEEEECTTTTCCTTCHHHHHHHHHHHHHH
T ss_pred CcccccCCCcchhhHHHHHHHhCCCcEEEecCCcccCCCCCcHHHHHHHHHHHHH
Confidence 44457799999999997 667786 565 48899998 56788888888887763
No 394
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=73.96 E-value=5.1 Score=28.46 Aligned_cols=48 Identities=6% Similarity=0.066 Sum_probs=37.1
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEe
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~g 57 (82)
-|++.+..++.++++++.. ++||.+++.+. .+.+..+++.| +|.+..-
T Consensus 259 EqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 308 (425)
T 3vcn_A 259 EDSVPAENQAGFRLIRQHT-TTPLAVGEIFAHVWDAKQLIEEQLIDYLRAT 308 (425)
T ss_dssp ECCSCCSSTTHHHHHHHHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCC
T ss_pred ECCCChhhHHHHHHHHhcC-CCCEEeCCCcCCHHHHHHHHHcCCCCeEecC
Confidence 4677777788888888875 69999999985 77888888877 6666443
No 395
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=73.95 E-value=13 Score=22.78 Aligned_cols=59 Identities=14% Similarity=0.048 Sum_probs=39.6
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+..+- +.+.+....++||+.++. ++-++.+-...++..+.
T Consensus 60 ~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~l~~~i~~~~~ 119 (225)
T 1kgs_A 60 DGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLP-----KPFDLRELIARVRALIR 119 (225)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEEEe-----CCCCHHHHHHHHHHHHh
Confidence 467778888887777887776654 445667778889887654 44566655555655544
No 396
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=73.93 E-value=3.7 Score=22.74 Aligned_cols=56 Identities=18% Similarity=0.013 Sum_probs=36.0
Q ss_pred chHHHHHHHHHh--CCCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN--YPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~--~~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++-++++++. .+++|+.+..+- +.+. ......|++.+ +.++-++.+-.+.++..
T Consensus 61 ~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~-~~~~~~g~~~~-----l~KP~~~~~L~~~i~~~ 119 (127)
T 3i42_A 61 SGLALVKQLRALPMEKTSKFVAVSGFAKNDL-GKEACELFDFY-----LEKPIDIASLEPILQSI 119 (127)
T ss_dssp BHHHHHHHHHHSCCSSCCEEEEEECC-CTTC-CHHHHHHCSEE-----EESSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhhccCCCCEEEEECCcchhH-HHHHHHhhHHh-----eeCCCCHHHHHHHHHHh
Confidence 467778888886 567776665554 4444 77778888875 44555665555555543
No 397
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=73.91 E-value=3.1 Score=26.63 Aligned_cols=43 Identities=28% Similarity=0.305 Sum_probs=29.8
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCC---cccHHHHHHcCCCEEEEe
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVG---PNTIDECAKAGANWIVSG 57 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~---~~ni~~~~~~Gad~vv~g 57 (82)
...+-++++|+..++.++..|.-.. ...++.+.++|||++++-
T Consensus 45 ~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh 90 (218)
T 3jr2_A 45 EGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVS 90 (218)
T ss_dssp HTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEE
T ss_pred cCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEe
Confidence 4566678888876566777654332 224688999999998775
No 398
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=73.69 E-value=17 Score=25.48 Aligned_cols=70 Identities=7% Similarity=-0.026 Sum_probs=39.8
Q ss_pred CCCCCCCCCcchHHHHH---HHHHh-CCCCcEEE-EcCCCcccHH----HHHHcCCCEEEEeccccCCCCHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVK---WLREN-YPTLNIEV-DGGVGPNTID----ECAKAGANWIVSGTAVINCPDRIQAISTLK 74 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~---~~~~~-~~~~~i~~-dGGI~~~ni~----~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~ 74 (82)
-|..|..+.-..-|+.+ .+.+. ...+|+.+ .|+.+.+..- ...++|||.+.+....|...+..+..+-++
T Consensus 100 ~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~ 178 (360)
T 4dpp_A 100 GGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQ 178 (360)
T ss_dssp SSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHH
T ss_pred cccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHH
Confidence 36666655433334432 23332 34577655 5554444433 345589999999998887666554444444
No 399
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=73.61 E-value=5.4 Score=25.54 Aligned_cols=43 Identities=23% Similarity=0.308 Sum_probs=30.6
Q ss_pred cchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
++..+.++++++ +++.+-+.-=++.+.++...++|||+++++.
T Consensus 49 ~~~~~~i~~~~~--~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~ 91 (207)
T 2yw3_A 49 EKGLEALKALRK--SGLLLGAGTVRSPKEAEAALEAGAAFLVSPG 91 (207)
T ss_dssp THHHHHHHHHTT--SSCEEEEESCCSHHHHHHHHHHTCSEEEESS
T ss_pred hHHHHHHHHHhC--CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC
Confidence 455666777777 4565555544566888899999999998763
No 400
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=73.55 E-value=9.6 Score=21.22 Aligned_cols=58 Identities=9% Similarity=0.003 Sum_probs=37.5
Q ss_pred chHHHHHHHHHhCCCCcEEEEc-CCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDG-GVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dG-GI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++. +++|+.+.. .-+.+......+.|++.++. ++-++.+-...++..++
T Consensus 69 ~g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~~i~~~~~ 127 (140)
T 3cg0_A 69 DGVETAARLAAG-CNLPIIFITSSQDVETFQRAKRVNPFGYLA-----KPVAADTLHRSIEMAIH 127 (140)
T ss_dssp CHHHHHHHHHHH-SCCCEEEEECCCCHHHHHHHHTTCCSEEEE-----ESCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhC-CCCCEEEEecCCCHHHHHHHHhcCCCEEEe-----CCCCHHHHHHHHHHHHh
Confidence 456667777776 677766554 45566677889999998754 34455555555555443
No 401
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=73.54 E-value=17 Score=24.95 Aligned_cols=72 Identities=7% Similarity=-0.011 Sum_probs=49.6
Q ss_pred CCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHH-HHcCCCEEEEe-ccccCCCCHHHHHHHHHHHHHH
Q psy11601 8 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDEC-AKAGANWIVSG-TAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 8 ~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~-~~~Gad~vv~g-s~i~~~~d~~~~~~~l~~~~~~ 79 (82)
.+....+..++-|...+++..++-.++.|.=..+.+++. ...|||-++.. ..-|..-++......|.+.+++
T Consensus 11 ~~g~l~~~~~eal~aA~~La~~V~av~~G~~~~~~~~~a~~a~GaDkv~~v~d~~l~~~~~~~~a~~La~li~~ 84 (315)
T 1efv_A 11 ANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQ 84 (315)
T ss_dssp ETTEECTHHHHHHHHHHTTTSEEEEEEEESCCHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHhcCcEEEEEECCchHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHHHHHh
Confidence 355677888888888888743455667775444567777 78999988777 4466656666666666665554
No 402
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=73.37 E-value=6.4 Score=28.07 Aligned_cols=49 Identities=6% Similarity=0.079 Sum_probs=37.6
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
+--|++.++.++.++++++.. ++||++++.+. .+.+..+++.| +|.+..
T Consensus 233 ~iEeP~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~ 283 (433)
T 3rcy_A 233 WYEEPVPPDNVGAMAQVARAV-RIPVATGERLTTKAEFAPVLREGAAAILQP 283 (433)
T ss_dssp EEECCSCTTCHHHHHHHHHHS-SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred EEECCCChhhHHHHHHHHhcc-CCCEEecCCCCCHHHHHHHHHcCCCCEEEe
Confidence 335777788888899998875 69999999986 56777888776 676643
No 403
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=73.25 E-value=7.6 Score=26.68 Aligned_cols=52 Identities=15% Similarity=0.082 Sum_probs=38.2
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecccc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
-|++.+..++.++++++.. ++||++++.+. .+.+..+++.| +|.+..--.-.
T Consensus 215 EqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~ 268 (354)
T 3jva_A 215 EQPVKRRDLEGLKYVTSQV-NTTIMADESCFDAQDALELVKKGTVDVINIKLMKC 268 (354)
T ss_dssp ECCSCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred ECCCChhhHHHHHHHHHhC-CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhc
Confidence 4778788888889988875 69999999975 45667777654 67776654333
No 404
>1p90_A NAFY protein, hypothetical protein; ribonuclease H motif, protein binding; 1.80A {Azotobacter vinelandii} SCOP: c.55.5.2
Probab=73.05 E-value=13 Score=22.52 Aligned_cols=46 Identities=13% Similarity=0.123 Sum_probs=33.8
Q ss_pred CCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 28 PTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 28 ~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
..+.+++.|||...-...|.++|+..+... ....+.+.++.+...|
T Consensus 66 ~g~~vvi~~~iG~~a~~~L~~~GI~v~~~~----~~~~i~eal~~l~~~L 111 (145)
T 1p90_A 66 QDCQVLYVVSIGGPAAAKVVRAGIHPLKKP----KGCAAQEAIAELQTVM 111 (145)
T ss_dssp TTCSEEEESBCCHHHHHHHHHTTCEEEECT----TCEEHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCHHHHHHHHHcCCEEEEeC----CCCCHHHHHHHHHHHh
Confidence 379999999999999999999999977642 1234555555554433
No 405
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=72.97 E-value=10 Score=21.21 Aligned_cols=57 Identities=9% Similarity=0.123 Sum_probs=37.4
Q ss_pred chHHHHHHHHHhCC-CCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCC-CHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYP-TLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCP-DRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~-~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~-d~~~~~~~l~~~~ 77 (82)
+.++-++++++. + ++|+.+..+ -+.+......+.|++.++. ++- ++.+-...++..+
T Consensus 72 ~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~~l~~~i~~~~ 131 (137)
T 2pln_A 72 NALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIA-----KPYRSIKALVARIEARL 131 (137)
T ss_dssp THHHHHHHHHHH-STTSEEEEEESSCCHHHHHHHHHTTCSEEEE-----SSCSCHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhc-CCCccEEEEeCCCCHHHHHHHHHcCCceeee-----CCCCCHHHHHHHHHHHH
Confidence 356667777776 6 778666554 5567788899999998754 344 5555555555443
No 406
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=72.95 E-value=16 Score=23.51 Aligned_cols=59 Identities=20% Similarity=0.186 Sum_probs=40.1
Q ss_pred chHHHHHHHHHhCC--CCcEE-EEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYP--TLNIE-VDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~--~~~i~-~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+ ++||. ..+--+.+....+.++||+.+ |.++-++.+-...+++.++
T Consensus 183 dG~~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~y-----l~KP~~~~~L~~~i~~~l~ 244 (259)
T 3luf_A 183 DGISLVRMLRERYSKQQLAIIGISVSDKRGLSARYLKQGANDF-----LNQPFEPEELQCRVSHNLE 244 (259)
T ss_dssp CHHHHHHHHHHHCCTTTSEEEEEECSSSSSHHHHHHHTTCSEE-----EESSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhccCCCCCeEEEEEccCCHHHHHHHHhcChhhe-----EcCCCCHHHHHHHHHHHHH
Confidence 46777888887643 46665 455566677788899999976 4555566666666665554
No 407
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=72.63 E-value=4.2 Score=28.83 Aligned_cols=50 Identities=10% Similarity=0.078 Sum_probs=36.6
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEE
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~ 56 (82)
+--|++.++.++..+++++...++||++++.+ +++.+.++++.| +|.+.+
T Consensus 272 ~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 323 (441)
T 2hxt_A 272 WIEEPTSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQI 323 (441)
T ss_dssp CEECCSCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred eeeCCCCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 33567777788888888876325899999998 467788887776 566654
No 408
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=72.51 E-value=5.8 Score=27.78 Aligned_cols=49 Identities=16% Similarity=0.045 Sum_probs=37.8
Q ss_pred CCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEe
Q psy11601 8 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 8 ~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~g 57 (82)
--|++.++.++.++++++.. ++||.+++.+. .+.+.++++.| +|.+..-
T Consensus 237 iEeP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 287 (394)
T 3mkc_A 237 AEATLQHDDLSGHAKLVENT-RSRICGAEMSTTRFEAEEWITKGKVHLLQSD 287 (394)
T ss_dssp EESCSCTTCHHHHHHHHHHC-SSCBEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred EECCCCchhHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCCeEecC
Confidence 35777788888889998876 69999999986 56778888776 6666543
No 409
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=72.47 E-value=4.1 Score=33.93 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=29.0
Q ss_pred CCcEEEEcCCC-cccHHHHHHcCCCEEEEecccc
Q psy11601 29 TLNIEVDGGVG-PNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 29 ~~~i~~dGGI~-~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
++||.++|||. ...+...+..||+.+-+|++.+
T Consensus 1099 ~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL 1132 (1520)
T 1ofd_A 1099 RVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAM 1132 (1520)
T ss_dssp GCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHH
Confidence 68999999997 6778888999999999998853
No 410
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=71.88 E-value=4.8 Score=28.50 Aligned_cols=48 Identities=6% Similarity=0.014 Sum_probs=36.7
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEe
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~g 57 (82)
-|++.++.++.++++++.. ++||++++.+. .+.+..+++.| +|.+..-
T Consensus 252 EqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k 301 (418)
T 3r4e_A 252 EDCTPAENQEAFRLVRQHT-VTPLAVGEIFNTIWDAKDLIQNQLIDYIRAT 301 (418)
T ss_dssp ESCSCCSSGGGGHHHHHHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCC
T ss_pred ECCCCccCHHHHHHHHhcC-CCCEEEcCCcCCHHHHHHHHHcCCCCeEecC
Confidence 4667777777788888775 68999999986 68888888877 6666443
No 411
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=71.79 E-value=9.6 Score=23.50 Aligned_cols=59 Identities=15% Similarity=0.061 Sum_probs=39.2
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++..+++|+.+..+ -+.+......++||+.++ .++-++.+-...++..++
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l-----~Kp~~~~~L~~~i~~~~~ 124 (233)
T 1ys7_A 65 DGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYL-----VKPFVLAELVARVKALLR 124 (233)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEE-----ESSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEE-----eCCCCHHHHHHHHHHHHh
Confidence 46677788887767778666554 455666788899998764 345566655555555544
No 412
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=71.67 E-value=19 Score=25.14 Aligned_cols=66 Identities=9% Similarity=-0.039 Sum_probs=41.9
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEe---ccccCC---CCHHHHHHHHHHHH
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG---TAVINC---PDRIQAISTLKSSV 77 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~g---s~i~~~---~d~~~~~~~l~~~~ 77 (82)
..|...+.++++++..++.++.+-.-.+.+.++...++|++.+-+- |.++.. .++.+.++.+.+.+
T Consensus 49 ~~~~~~~~~~~i~~~~~~~~v~~~~r~~~~di~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v 120 (382)
T 2ztj_A 49 ASPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVI 120 (382)
T ss_dssp SCHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCcEEEEEcccChhhHHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHH
Confidence 5677888888888876567777655556788999999999976543 223221 24455555555544
No 413
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=71.63 E-value=20 Score=24.12 Aligned_cols=72 Identities=13% Similarity=-0.039 Sum_probs=40.8
Q ss_pred CCCCCCCCCcchHHHHH---HHHHh-CCCCc-EEEEcCCCccc----HHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVK---WLREN-YPTLN-IEVDGGVGPNT----IDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~---~~~~~-~~~~~-i~~dGGI~~~n----i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
-|..|..+.-..-|+.+ .+.+. ..++| ++-.|+.+.+. ++...++|||.+.+....|..++..+..+-+++
T Consensus 45 ~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ 124 (300)
T 3eb2_A 45 LGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRA 124 (300)
T ss_dssp TSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHH
T ss_pred CccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Confidence 45666655433333322 22332 33455 44455544443 335567899999999988876676655555544
Q ss_pred H
Q psy11601 76 S 76 (82)
Q Consensus 76 ~ 76 (82)
.
T Consensus 125 v 125 (300)
T 3eb2_A 125 I 125 (300)
T ss_dssp H
T ss_pred H
Confidence 3
No 414
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=71.56 E-value=8.4 Score=24.79 Aligned_cols=39 Identities=8% Similarity=0.160 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCCcEEE-EcCCCccc---------HHHHHHcCCCEEEEecc
Q psy11601 18 PKVKWLRENYPTLNIEV-DGGVGPNT---------IDECAKAGANWIVSGTA 59 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~-dGGI~~~n---------i~~~~~~Gad~vv~gs~ 59 (82)
..|+.+++.. ++|+.+ | +.... +..+.++|||++.++.+
T Consensus 43 ~~l~~v~~~~-~~~v~aqd--~~~~~~ga~tGei~~~~~~~~Gad~Vll~~s 91 (219)
T 2h6r_A 43 VDLRMIVENV-NIPVYAQH--IDNINPGSHTGHILAEAIKDCGCKGTLINHS 91 (219)
T ss_dssp TTHHHHHHHC-CSCBEESC--CCSCCSBSCTTCCCHHHHHHHTCCEEEESBT
T ss_pred HHHHHHHHHc-CCcEEEEE--CChhhcCCccCchHHHHHHHcCCCEEEECCc
Confidence 3445555554 577766 4 56666 89999999999999854
No 415
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=71.49 E-value=11 Score=26.36 Aligned_cols=50 Identities=4% Similarity=0.001 Sum_probs=37.7
Q ss_pred CCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEec
Q psy11601 8 GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGT 58 (82)
Q Consensus 8 ~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs 58 (82)
--|++.++.++.++++++.. ++||.+++.+. .+.+.++++.| +|.+..--
T Consensus 239 iEeP~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 239 FEEPIPPEKPEDMAEVARYT-SIPVATGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp EECCSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred EECCCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 34777777888899998876 69999999986 46777888777 56664443
No 416
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=71.35 E-value=4.1 Score=25.43 Aligned_cols=40 Identities=18% Similarity=0.080 Sum_probs=27.7
Q ss_pred chHHHHHHHHHhCC-CCcEEEEcCCCcccHHHHHHcCCCEE
Q psy11601 15 DMMPKVKWLRENYP-TLNIEVDGGVGPNTIDECAKAGANWI 54 (82)
Q Consensus 15 ~~~~ki~~~~~~~~-~~~i~~dGGI~~~ni~~~~~~Gad~v 54 (82)
...+-++++|+..+ +.++-+.--.+++.+....++|||.+
T Consensus 47 ~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 47 DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI 87 (205)
T ss_dssp THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE
T ss_pred hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE
Confidence 44455677776543 45555433358899999999999999
No 417
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=71.34 E-value=21 Score=24.25 Aligned_cols=72 Identities=7% Similarity=-0.054 Sum_probs=39.6
Q ss_pred CCCCCCCCCcchHHHHH---HHHHh-CCCCcEEE-EcCCCccc----HHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVK---WLREN-YPTLNIEV-DGGVGPNT----IDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~---~~~~~-~~~~~i~~-dGGI~~~n----i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
-|..|.-+.-..-|+.+ .+.+. ..++|+.+ .|+.+.+. ++...++|||.+.+....|..++..+..+-+++
T Consensus 65 ~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 144 (315)
T 3na8_A 65 LGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRA 144 (315)
T ss_dssp SSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHH
T ss_pred CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 35556554433333322 23332 33566544 44344333 335678999999999988776666555555544
Q ss_pred H
Q psy11601 76 S 76 (82)
Q Consensus 76 ~ 76 (82)
.
T Consensus 145 v 145 (315)
T 3na8_A 145 V 145 (315)
T ss_dssp H
T ss_pred H
Confidence 4
No 418
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=71.08 E-value=12 Score=21.37 Aligned_cols=57 Identities=9% Similarity=0.108 Sum_probs=36.1
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEeccccCCCCHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVINCPDRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~~~~d~~~~~~~l~~~ 76 (82)
+.++-++++++..+.+|+.+..+- +.+........| ++.++. ++-++.+-...++..
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~-----kP~~~~~L~~~i~~~ 123 (154)
T 2rjn_A 65 GGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLL-----KPWEDEDVFKVVEKG 123 (154)
T ss_dssp CHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEE-----SSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeee-----CCCCHHHHHHHHHHH
Confidence 466778888887777887666554 446677777887 887753 333444444444443
No 419
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=71.07 E-value=7.8 Score=27.06 Aligned_cols=49 Identities=18% Similarity=0.260 Sum_probs=37.2
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
+--|++.++.++.++++++.. ++||+++..+. .+.+..+++.| +|.+..
T Consensus 243 ~iEeP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~i 293 (383)
T 3toy_A 243 WIEEPVPQENLSGHAAVRERS-EIPIQAGENWWFPRGFAEAIAAGASDFIMP 293 (383)
T ss_dssp EEECCSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHHHTCCSEECC
T ss_pred EEECCCCcchHHHHHHHHhhc-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 335778888888899998876 69999999986 46777787776 565543
No 420
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=70.85 E-value=11 Score=20.54 Aligned_cols=59 Identities=17% Similarity=0.080 Sum_probs=37.6
Q ss_pred chHHHHHHHHHhCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
+.++-++++++ .++.|+.+..+ -+.+......++|++.++. ++-++.+-...+++.++.
T Consensus 60 ~g~~~~~~l~~-~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~l~~~i~~~~~~ 119 (122)
T 1zgz_A 60 NGLMLTRALRE-RSTVGIILVTGRSDRIDRIVGLEMGADDYVT-----KPLELRELVVRVKNLLWR 119 (122)
T ss_dssp CHHHHHHHHHT-TCCCEEEEEESSCCHHHHHHHHHHTCSEEEE-----SSCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHh-cCCCCEEEEECCCChhhHHHHHHhCHHHHcc-----CCCCHHHHHHHHHHHHHH
Confidence 35566777777 45677665544 4556677888999998743 444666555556555543
No 421
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=70.82 E-value=8.3 Score=26.99 Aligned_cols=49 Identities=12% Similarity=0.245 Sum_probs=37.3
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
+--|++.++.++.++++++.. ++||+++..+. .+.+..+++.| +|.+..
T Consensus 249 ~iEqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~i 299 (390)
T 3ugv_A 249 WIEEPVVYDNFDGYAQLRHDL-KTPLMIGENFYGPREMHQALQAGACDLVMP 299 (390)
T ss_dssp EEECCSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred EEECCCCcccHHHHHHHHHhc-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 335788888888999998876 59999999976 46777888776 566533
No 422
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=70.76 E-value=12 Score=21.29 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=30.0
Q ss_pred chHHHHHHHHH--hCCCCcEEE-EcCCCcccHHHHHHcCCCEEEE
Q psy11601 15 DMMPKVKWLRE--NYPTLNIEV-DGGVGPNTIDECAKAGANWIVS 56 (82)
Q Consensus 15 ~~~~ki~~~~~--~~~~~~i~~-dGGI~~~ni~~~~~~Gad~vv~ 56 (82)
+.++-++++++ ..+++|+.+ .+.-+.+.+....+.|++.++.
T Consensus 73 ~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~ 117 (152)
T 3heb_A 73 TGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYIT 117 (152)
T ss_dssp BHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEe
Confidence 46777888887 455677555 4555666778899999998744
No 423
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=70.62 E-value=13 Score=24.54 Aligned_cols=64 Identities=17% Similarity=0.165 Sum_probs=41.7
Q ss_pred hHHHHHHHHH----hCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccC----CCCHHHHHHHHHHHHHH
Q psy11601 16 MMPKVKWLRE----NYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVIN----CPDRIQAISTLKSSVQK 79 (82)
Q Consensus 16 ~~~ki~~~~~----~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~----~~d~~~~~~~l~~~~~~ 79 (82)
.++-++++.+ +.++..|.+.-=-+..++.++..+|+|.+-+.-.++. .+-....+++|.+-+++
T Consensus 143 G~~~v~~i~~~~~~~~~~T~IlaAS~Rn~~~v~~aa~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~Dw~~ 214 (223)
T 3s1x_A 143 GMQIIDMIRTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKFLEDWKK 214 (223)
T ss_dssp THHHHHHHHHHHHHTTCCSEEEEBSCCSHHHHHHHHHHTCSEEEECHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHHHcCCCEEEeCHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 4444444443 2346677777666777777777899999888876664 33334667777766654
No 424
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=70.56 E-value=12 Score=26.39 Aligned_cols=50 Identities=8% Similarity=0.068 Sum_probs=37.9
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEe
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~g 57 (82)
+--|++.+..++.++++++.. ++||++++.+. .+.+.++++.| +|.+..-
T Consensus 231 ~iEeP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d 282 (412)
T 4e4u_A 231 WFEEPVPPGQEEAIAQVAKHT-SIPIATGERLTTKYEFHKLLQAGGASILQLN 282 (412)
T ss_dssp EEECCSCSSCHHHHHHHHHTC-SSCEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred EEECCCChhhHHHHHHHHhhC-CCCEEecCccCCHHHHHHHHHcCCCCEEEeC
Confidence 335777888888899998875 69999999986 46777888777 6666443
No 425
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=70.54 E-value=9.5 Score=21.35 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=38.2
Q ss_pred chHHHHHHHHH--hCCCCcEEEEcCCCc-ccHH-HHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRE--NYPTLNIEVDGGVGP-NTID-ECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 15 ~~~~ki~~~~~--~~~~~~i~~dGGI~~-~ni~-~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~~ 79 (82)
+.++-++++++ ..+++|+.+..+-.. +... ...+.|++.++ .++-++.+-...+++.+++
T Consensus 64 ~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l-----~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 64 DGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWL-----EKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp CHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEE-----CSSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEE-----eCCCCHHHHHHHHHHHHHh
Confidence 45677777877 456788877766433 3333 56678888763 4455666666666666654
No 426
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=70.28 E-value=23 Score=24.11 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=39.3
Q ss_pred CCCCCCCCCcchHHHHH---HHHHh-CCCCcEEE-EcCCCccc----HHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVK---WLREN-YPTLNIEV-DGGVGPNT----IDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~---~~~~~-~~~~~i~~-dGGI~~~n----i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
-|..|..+.-..-|+.+ .+.+. ..++|+.+ .|+.+.+. ++...++|||.+.+....|..++..+..+-+++
T Consensus 64 ~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 143 (314)
T 3qze_A 64 VGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRH 143 (314)
T ss_dssp SSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Confidence 35566555433333322 22332 34566554 33333332 234557999999999988776665555554444
Q ss_pred H
Q psy11601 76 S 76 (82)
Q Consensus 76 ~ 76 (82)
.
T Consensus 144 v 144 (314)
T 3qze_A 144 I 144 (314)
T ss_dssp H
T ss_pred H
Confidence 3
No 427
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=70.08 E-value=15 Score=23.69 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=36.3
Q ss_pred cchHHHHHHHHHhCCCCcEEE---EcCCCcccH----HHHHHcCCCEEEEeccccC-CCCHHHHHHHHHHH
Q psy11601 14 QDMMPKVKWLRENYPTLNIEV---DGGVGPNTI----DECAKAGANWIVSGTAVIN-CPDRIQAISTLKSS 76 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~---dGGI~~~ni----~~~~~~Gad~vv~gs~i~~-~~d~~~~~~~l~~~ 76 (82)
+..++.++++++...++++-+ .++.+.+++ +.+.++|||.+...+.... ..++ +.++.+++.
T Consensus 102 ~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~-~~i~~v~~~ 171 (225)
T 1mzh_A 102 DFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTL-EEVRLIKSS 171 (225)
T ss_dssp HHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCH-HHHHHHHHH
Confidence 345566777777654455555 688887764 4555669999955554332 2232 344555544
No 428
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=70.05 E-value=11 Score=25.29 Aligned_cols=43 Identities=9% Similarity=0.050 Sum_probs=29.4
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC---cccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG---PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~---~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
..+.++++++.. ++|+.+ ++. .+.+..+.++|||.++ ++..+.
T Consensus 66 ~~~~i~~I~~~~-~iPv~~--k~r~g~~~~~~~~~a~GAd~V~-~~~~l~ 111 (305)
T 2nv1_A 66 DPTIVEEVMNAV-SIPVMA--KARIGHIVEARVLEAMGVDYID-ESEVLT 111 (305)
T ss_dssp CHHHHHHHHHHC-SSCEEE--EECTTCHHHHHHHHHHTCSEEE-ECTTSC
T ss_pred CHHHHHHHHHhC-CCCEEe--cccccchHHHHHHHHCCCCEEE-EeccCC
Confidence 456677777764 578774 443 4567888899999997 554433
No 429
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=70.02 E-value=3.6 Score=28.06 Aligned_cols=40 Identities=8% Similarity=0.041 Sum_probs=32.6
Q ss_pred hHHHHHHHHHhCCCCcEEEE---cCCCcccHHHHHHcCCCEEEEe
Q psy11601 16 MMPKVKWLRENYPTLNIEVD---GGVGPNTIDECAKAGANWIVSG 57 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~d---GGI~~~ni~~~~~~Gad~vv~g 57 (82)
.++.++++++ . ++||.+- +|.+++.+..+.++|+|.|++.
T Consensus 170 ~~~~i~~vr~-~-~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs 212 (332)
T 1vcf_A 170 LVERLAELLP-L-PFPVMVKEVGHGLSREAALALRDLPLAAVDVA 212 (332)
T ss_dssp HHHHHHHHCS-C-SSCEEEECSSSCCCHHHHHHHTTSCCSEEECC
T ss_pred HHHHHHHHHc-C-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEeC
Confidence 5677888888 5 6787765 3479999999999999999984
No 430
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=69.66 E-value=12 Score=27.03 Aligned_cols=51 Identities=10% Similarity=0.150 Sum_probs=39.8
Q ss_pred CCcEEEEcCCCcccHHHHHHc-CCCEEEEe-ccccCC-CCHHHHHHHHHHHHHH
Q psy11601 29 TLNIEVDGGVGPNTIDECAKA-GANWIVSG-TAVINC-PDRIQAISTLKSSVQK 79 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~~~-Gad~vv~g-s~i~~~-~d~~~~~~~l~~~~~~ 79 (82)
++-=++.|||+...++.+.+. |-|.+..- ..+++. +.++.-++.+|+.++.
T Consensus 342 ~v~PV~SGGih~~~~p~l~~~~G~Dvvl~~GGG~~gHP~G~aaGa~A~R~A~eA 395 (425)
T 2zvi_A 342 QTFAVPSAGIHPGMVPLLMRDFGIDHIINAGGGVHGHPNGAQGGGRAFRAIIDA 395 (425)
T ss_dssp CCEEEECSSCCGGGHHHHHHHHTTSBEEECGGGGGGSTTHHHHHHHHHHHHHHH
T ss_pred CceEeecCCcchhhHHHHHHHhCCceEEEcCccccCCCCCcHHHHHHHHHHHHH
Confidence 455679999999999977665 98877654 779984 5688888888888764
No 431
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=69.58 E-value=7.3 Score=27.33 Aligned_cols=51 Identities=10% Similarity=0.128 Sum_probs=37.9
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEec
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGT 58 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs 58 (82)
+--|++.++.++.++++++.. ++||++++.+. .+.+.++++.| +|.+..--
T Consensus 240 ~iEeP~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~ 292 (400)
T 4dxk_A 240 WHEDPIKMDSLSSLTRYAAVS-PAPISASETLGSRWAFRDLLETGAAGVVMLDI 292 (400)
T ss_dssp EEECCBCTTSGGGHHHHHHHC-SSCEEECTTCCHHHHHHHHHHTTCCCEEEECT
T ss_pred EEEcCCCcccHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 334777777788888888875 69999999986 46777888877 57665543
No 432
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=69.50 E-value=19 Score=24.74 Aligned_cols=52 Identities=12% Similarity=0.098 Sum_probs=38.6
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecccc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
-|++.+..++.++++++.. ++||++++.+. .+.+..+++.| +|.+..--.-.
T Consensus 220 EqP~~~~~~~~~~~l~~~~-~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~ 273 (370)
T 1chr_A 220 EQPVGRENTQALRRLSDNN-RVAIMADESLSTLASAFDLARDRSVDVFSLKLCNM 273 (370)
T ss_dssp ECCSCTTCHHHHHHHHHHS-CSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTS
T ss_pred ECCCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEECcccc
Confidence 4778888888888888875 68999999865 56777777765 77776654433
No 433
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=69.37 E-value=22 Score=23.63 Aligned_cols=62 Identities=15% Similarity=0.013 Sum_probs=40.6
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEec---cccC----CCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGT---AVIN----CPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs---~i~~----~~d~~~~~~~l~~~~~ 78 (82)
+..+.++.+++. +++++.+-. -+.+.+....++|++.|.+.- ..+. ..+..+.++.+++.++
T Consensus 59 ~~~e~~~~i~~~-~~~~v~~l~-~n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~ 127 (295)
T 1ydn_A 59 DSREVMAGIRRA-DGVRYSVLV-PNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIG 127 (295)
T ss_dssp THHHHHHHSCCC-SSSEEEEEC-SSHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhC-CCCEEEEEe-CCHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 456666666554 567887765 688999999999999876542 2221 2356666666665543
No 434
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=69.22 E-value=13 Score=22.74 Aligned_cols=56 Identities=9% Similarity=0.116 Sum_probs=36.7
Q ss_pred chHHHHHHHHHhCC-CCcEEEEc-CCCcccHHHHHHcCCCEEEEeccccCCC-CHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYP-TLNIEVDG-GVGPNTIDECAKAGANWIVSGTAVINCP-DRIQAISTLKSS 76 (82)
Q Consensus 15 ~~~~ki~~~~~~~~-~~~i~~dG-GI~~~ni~~~~~~Gad~vv~gs~i~~~~-d~~~~~~~l~~~ 76 (82)
+.++-++++++. + ++|+.+.. --+.+......++||+.++. ++- ++.+-...++..
T Consensus 54 ~g~~~~~~lr~~-~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~-----Kp~~~~~~L~~~i~~~ 112 (223)
T 2hqr_A 54 NALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIA-----KPYRSIKALVARIEAR 112 (223)
T ss_dssp THHHHHHHHHHH-CTTSEEEEEESSCCHHHHHHHHHHTCSEEEE-----TTCSCTHHHHHHHHHH
T ss_pred CHHHHHHHHHhC-CCCCcEEEEECCCCHHHHHHHHHcCCCEEEE-----CCCCCHHHHHHHHHHH
Confidence 456677777777 5 77866554 45677788899999998754 344 555444444443
No 435
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=69.13 E-value=25 Score=24.15 Aligned_cols=47 Identities=11% Similarity=0.115 Sum_probs=33.2
Q ss_pred hHHHHHHHHHhCCCCcEEE---EcCCC-cccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLRENYPTLNIEV---DGGVG-PNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~---dGGI~-~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
..+.++++.+..++.|+.+ .||-+ .-+..+|.+.|++.++.+..++.
T Consensus 194 ~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~r 244 (302)
T 3fa4_A 194 SREMARQVIQDLAGWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALG 244 (302)
T ss_dssp CHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHH
T ss_pred CHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHH
Confidence 4567777777654466644 34443 34789999999999998877764
No 436
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=68.65 E-value=9 Score=26.70 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=35.7
Q ss_pred HHHHHHHHHhCCCCcEEEEc-----------------------CCCcccHHHHHHcCCCEEEEeccc
Q psy11601 17 MPKVKWLRENYPTLNIEVDG-----------------------GVGPNTIDECAKAGANWIVSGTAV 60 (82)
Q Consensus 17 ~~ki~~~~~~~~~~~i~~dG-----------------------GI~~~ni~~~~~~Gad~vv~gs~i 60 (82)
+++|+++++.. ++|++.=| |+..+.+++..+.|+.-+=+.+.+
T Consensus 193 ~~~L~~I~~~~-~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV~KiNi~Tdl 258 (323)
T 2isw_A 193 IDRVKTISDLT-GIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDS 258 (323)
T ss_dssp CHHHHHHHHHH-CSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHH
T ss_pred HHHHHHHHHHh-CCCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCCCeEEEEChHH
Confidence 45666666654 58999999 999999999999999998888776
No 437
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=68.58 E-value=5.8 Score=27.14 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=27.1
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEecccc
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
.+.++.++++..++-.+.+-.|-+. .+......|+++++++.+=+
T Consensus 180 d~~~~~~~~~~~~~~~f~v~~G~d~-~~l~~l~~G~~G~is~~an~ 224 (318)
T 3qfe_A 180 SVGKITRLAATLPPAAFSVFGGQSD-FLIGGLSVGSAGCIAAFANV 224 (318)
T ss_dssp CHHHHHHHHHHSCGGGCEEEESCGG-GHHHHHHTTCCEEECGGGGT
T ss_pred CHHHHHHHHHhcCCCCEEEEEecHH-HHHHHHHCCCCEEEecHHHh
Confidence 3444444333322224677777554 55567789999999996633
No 438
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=68.55 E-value=8.9 Score=26.49 Aligned_cols=53 Identities=13% Similarity=0.253 Sum_probs=33.3
Q ss_pred HHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHH
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTL 73 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l 73 (82)
+-++++++..|..+|+|-=- +++.+.+.+++|+|+|-+.. |..++.++.++.+
T Consensus 196 ~Av~~ar~~~p~~kIeVEv~-tl~e~~eAl~aGaDiImLDn--~s~~~l~~av~~~ 248 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAIECD-NISQVEESLSNNVDMILLDN--MSISEIKKAVDIV 248 (300)
T ss_dssp HHHHHHHHHSSSCCEEEEES-SHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEEEC-CHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHhh
Confidence 34566666655555554322 57888889999999988865 4344444444433
No 439
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=68.53 E-value=10 Score=26.40 Aligned_cols=44 Identities=16% Similarity=0.064 Sum_probs=32.8
Q ss_pred CCCCcchHHHHHHHHHh-----CCCCcEEEEcCC-CcccHHHHHHcC-CCEEEE
Q psy11601 10 QKFMQDMMPKVKWLREN-----YPTLNIEVDGGV-GPNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 10 q~~~~~~~~ki~~~~~~-----~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~ 56 (82)
|++. +.++..+++++. . ++||++|+ + +++.+.++++.| +|.+.+
T Consensus 234 ~P~~-~d~~~~~~l~~~l~~~g~-~iPIa~dE-~~~~~~~~~~i~~~~~d~v~i 284 (392)
T 3p3b_A 234 EAFH-EDEALYEDLKEWLGQRGQ-NVLIADGE-GLASPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp CSSS-CCHHHHHHHHHHHHHHTC-CCEEEECC-SSCCTTHHHHHHTTSCCEECC
T ss_pred cCCc-ccHHHHHHHHHhhccCCC-CccEEecC-CCCHHHHHHHHHcCCCCEEEe
Confidence 5555 567777777765 4 69999999 7 568899999888 566554
No 440
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=68.49 E-value=8.1 Score=21.67 Aligned_cols=58 Identities=9% Similarity=-0.075 Sum_probs=35.8
Q ss_pred chHHHHHHHHH--hCCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRE--NYPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~--~~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
..++-++++++ ..+++|+.+..+ -+.+......++|++.++. ++-++.+-...++..+
T Consensus 65 ~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~~i~~~~ 125 (142)
T 3cg4_A 65 DGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYIT-----KPFDNEDLIEKTTFFM 125 (142)
T ss_dssp CHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEE-----SSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEe-----CCCCHHHHHHHHHHHH
Confidence 45677788887 556677666554 4566677788888877643 3335554444444443
No 441
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=68.46 E-value=24 Score=23.61 Aligned_cols=72 Identities=15% Similarity=0.099 Sum_probs=39.7
Q ss_pred CCCCCCCCCcchHHHHH--H-HHHh-CCCCcEEE-EcCCCccc----HHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVK--W-LREN-YPTLNIEV-DGGVGPNT----IDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~--~-~~~~-~~~~~i~~-dGGI~~~n----i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
-|..|..+.-..-|+.+ + ..+. ..++|+.+ .|+.+.+. .+...++|||.+.+....|..++..+..+-+++
T Consensus 42 ~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ 121 (291)
T 3tak_A 42 VGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKA 121 (291)
T ss_dssp SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHH
Confidence 46666655433333322 2 2232 34566554 33333332 335668999999999888776665555444444
Q ss_pred H
Q psy11601 76 S 76 (82)
Q Consensus 76 ~ 76 (82)
.
T Consensus 122 i 122 (291)
T 3tak_A 122 I 122 (291)
T ss_dssp H
T ss_pred H
Confidence 3
No 442
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=68.40 E-value=14 Score=20.84 Aligned_cols=57 Identities=11% Similarity=0.117 Sum_probs=35.0
Q ss_pred chHHHHHHHHHhCCCCcEEE-EcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEV-DGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~-dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++. +++|+.+ .+.-+.+.+..+.++|++.++. ++-++.+-...++..+
T Consensus 65 ~g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~~~i~~~l 122 (140)
T 3h5i_A 65 DGVQTALAIQQI-SELPVVFLTAHTEPAVVEKIRSVTAYGYVM-----KSATEQVLITIVEMAL 122 (140)
T ss_dssp CHHHHHHHHHHH-CCCCEEEEESSSSCCCCGGGGGSCEEEEEE-----TTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhC-CCCCEEEEECCCCHHHHHHHHhCCCcEEEe-----CCCCHHHHHHHHHHHH
Confidence 456667777776 5677555 4555666777888889887643 4445544444444443
No 443
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=68.40 E-value=13 Score=24.73 Aligned_cols=50 Identities=14% Similarity=0.072 Sum_probs=37.7
Q ss_pred CCcchHHHHHHHHHhCCCCcEE-EEcCCCcccHHHHHHcCCCEEEEeccccC
Q psy11601 12 FMQDMMPKVKWLRENYPTLNIE-VDGGVGPNTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~~~~~~i~-~dGGI~~~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
|-...++.|+++++.. ++||. =|=.++...+.+...+|||.+.+..+...
T Consensus 85 ~F~gs~~dL~~ir~~v-~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~ 135 (251)
T 1i4n_A 85 YFKGDPAFVRAARNLT-CRPILAKDFYIDTVQVKLASSVGADAILIIARILT 135 (251)
T ss_dssp SSCCCTHHHHHHHTTC-CSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSC
T ss_pred ccCCCHHHHHHHHHhC-CCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccCC
Confidence 3334678888888765 45644 44568888899999999999999988654
No 444
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=68.37 E-value=6.7 Score=26.40 Aligned_cols=55 Identities=15% Similarity=0.112 Sum_probs=35.2
Q ss_pred CCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccc
Q psy11601 5 PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAV 60 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i 60 (82)
|...|=|.....+.++.++++..++-.+.+-.|-+ +.+-.....|+++++++.+=
T Consensus 156 pnivgiK~ssgd~~~~~~~~~~~~~~~f~v~~G~d-~~~~~~l~~G~~G~is~~~n 210 (292)
T 3daq_A 156 PYIVALKDATNDFEYLEEVKKRIDTNSFALYSGND-DNVVEYYQRGGQGVISVIAN 210 (292)
T ss_dssp TTEEEEEECCCCHHHHHHHHTTSCTTTSEEEESCG-GGHHHHHHTTCCEEEESGGG
T ss_pred CCEEEEEeCCCCHHHHHHHHHHCCCCCEEEEECCH-HHHHHHHhcCCCEEEeCHHH
Confidence 44555555555667777766654421355556644 45667778999999999663
No 445
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=68.33 E-value=25 Score=23.78 Aligned_cols=72 Identities=15% Similarity=0.139 Sum_probs=40.4
Q ss_pred CCCCCCCCCcchHHHHH---HHHHh-CCCCcEEE-EcCCCccc----HHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVK---WLREN-YPTLNIEV-DGGVGPNT----IDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~---~~~~~-~~~~~i~~-dGGI~~~n----i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
-|..|.-+.-..-|+.+ .+.+. ..++|+.+ .|+.+.+. .+...++|||.+.+....|..++..+..+-+++
T Consensus 56 ~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 135 (304)
T 3l21_A 56 SGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTA 135 (304)
T ss_dssp SSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 46666655433333322 23332 34566554 33334333 345667899999999988776666555554444
Q ss_pred H
Q psy11601 76 S 76 (82)
Q Consensus 76 ~ 76 (82)
.
T Consensus 136 v 136 (304)
T 3l21_A 136 V 136 (304)
T ss_dssp H
T ss_pred H
Confidence 3
No 446
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=68.31 E-value=13 Score=20.59 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=37.8
Q ss_pred chHHHHHHHHHh--CCCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN--YPTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~--~~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
+.++-++++++. .+++|+.+..+ -+.+......++|++.++ .++-++.+-...++..+
T Consensus 65 ~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~L~~~l~~~l 125 (129)
T 3h1g_A 65 NGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYI-----VKPFTPQVLKEKLEVVL 125 (129)
T ss_dssp CHHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEE-----ESCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEE-----eCCCCHHHHHHHHHHHh
Confidence 456777777763 34677665554 456667788999999874 35556665555555544
No 447
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=67.94 E-value=11 Score=25.42 Aligned_cols=56 Identities=18% Similarity=0.055 Sum_probs=36.6
Q ss_pred CCCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEecccc
Q psy11601 4 EPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 4 ~pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
+|...|=|.....+.++.++++..+ -.+.+-.|- .+.+......|+++++++.+=+
T Consensus 160 ~pnivgiKdssgd~~~~~~~~~~~~-~~f~v~~G~-d~~~l~~l~~G~~G~is~~an~ 215 (297)
T 3flu_A 160 IPNIVGVKEASGNIGSNIELINRAP-EGFVVLSGD-DHTALPFMLCGGHGVITVAANA 215 (297)
T ss_dssp STTEEEEEECSCCHHHHHHHHHHSC-TTCEEEECC-GGGHHHHHHTTCCEEEESGGGT
T ss_pred CCCEEEEEeCCCCHHHHHHHHHhcC-CCeEEEECc-HHHHHHHHhCCCCEEEechHhh
Confidence 3555566666666777777666542 234555563 4556677889999999987644
No 448
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=67.87 E-value=7.8 Score=25.78 Aligned_cols=39 Identities=8% Similarity=-0.016 Sum_probs=29.4
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcCCCEE
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWI 54 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~Gad~v 54 (82)
..++.|+++++.. ++|+.+..++ +.+.++.+.++|||.+
T Consensus 65 ~~~~~i~~i~~~~-~~Pvi~~~~~~~~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 65 SDPKIIKEIMAAV-SIPVMAKVRIGHFVEAMILEAIGVDFI 104 (297)
T ss_dssp CCHHHHHHHHTTC-SSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHhc-CCCeEEEeccCCHHHHHHHHHCCCCEE
Confidence 3467788888765 5788775544 3688889999999999
No 449
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=67.56 E-value=17 Score=25.50 Aligned_cols=54 Identities=15% Similarity=0.104 Sum_probs=39.0
Q ss_pred CCCCC-CCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecccc
Q psy11601 7 FGGQK-FMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 7 ~~gq~-~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
+--|+ +.++.++..+++++.. ++||++++.+. .+.+.++++.| +|.+..--.-.
T Consensus 243 ~iEqP~~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~ 299 (410)
T 3dip_A 243 WVEDPIAKMDNIPAVADLRRQT-RAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWC 299 (410)
T ss_dssp EEECCBSCTTCHHHHHHHHHHH-CCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTS
T ss_pred EEECCCCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCeEeeccccc
Confidence 33577 5777788888888865 58999999987 56777888776 67666544433
No 450
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=67.54 E-value=13 Score=26.46 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=38.5
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEecc
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTA 59 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~ 59 (82)
+--|++.++.++.++++++.. ++||+++..+. .+.+..+++.| +|.+..--.
T Consensus 270 ~iEeP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~ 323 (440)
T 3t6c_A 270 FLEDPVAPENTEWLKMLRQQS-STPIAMGELFVNVNEWKPLIDNKLIDYIRCHIS 323 (440)
T ss_dssp EEECSSCGGGGGGHHHHHHHC-CSCEEECTTCCSHHHHHHHHHTTCCSEECCCGG
T ss_pred EEECCCChhhHHHHHHHHhhc-CCCEEeCcccCCHHHHHHHHHcCCccceeechh
Confidence 335778888888888888875 59999999976 46777888776 666654433
No 451
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=67.51 E-value=14 Score=20.50 Aligned_cols=58 Identities=14% Similarity=-0.028 Sum_probs=37.9
Q ss_pred chHHHHHHHHHhCCCCcEEEE-cCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVD-GGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~ 77 (82)
..++-++++++..+.+|+.+. +.-+.+......+.|++.++. ++-++.+-...++..+
T Consensus 61 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~~~i~~~~ 119 (136)
T 1mvo_A 61 DGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMT-----KPFSPREVNARVKAIL 119 (136)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEE-----SSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHhCCCCEEEE-----CCCCHHHHHHHHHHHH
Confidence 356677778876666776554 555667788889999997643 4445555555555444
No 452
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=67.40 E-value=14 Score=20.72 Aligned_cols=59 Identities=19% Similarity=0.078 Sum_probs=37.7
Q ss_pred chHHHHHHHHHh--CCCCcEEE-EcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLREN--YPTLNIEV-DGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~--~~~~~i~~-dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++. .+++|+.+ .+.-+.+......++|++.++ .++-++.+-...+++.+.
T Consensus 62 ~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l-----~KP~~~~~L~~~i~~~l~ 123 (136)
T 3t6k_A 62 DGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYL-----AKPFEPQELVYRVKNILA 123 (136)
T ss_dssp CHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEE-----ETTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEE-----eCCCCHHHHHHHHHHHHh
Confidence 356667777763 34566554 445556667788999999874 455566666666665554
No 453
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=67.34 E-value=7.6 Score=27.61 Aligned_cols=33 Identities=27% Similarity=0.307 Sum_probs=28.7
Q ss_pred Cc-EEEEcCCCcccHHHHHH--cCC--CEEEEeccccC
Q psy11601 30 LN-IEVDGGVGPNTIDECAK--AGA--NWIVSGTAVIN 62 (82)
Q Consensus 30 ~~-i~~dGGI~~~ni~~~~~--~Ga--d~vv~gs~i~~ 62 (82)
.. |++.+|++++.+.++.+ .|+ +.|-+|+.+.+
T Consensus 299 ~k~Ii~SdgLd~~~i~~l~~~~~g~~~d~FGvGT~L~~ 336 (394)
T 2im5_A 299 IKYIIFSDSLTPQRAIEIQKLCAGRIKASFGIGTNLTN 336 (394)
T ss_dssp GCEEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHS
T ss_pred ccEEEEcCCCCHHHHHHHHHHhcCCCceEEEeCccccc
Confidence 67 99999999999999999 566 88888888875
No 454
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=67.29 E-value=8.3 Score=21.84 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=22.8
Q ss_pred CCcEEEEcCCCcccHHHHHHcCCCEEEEecc
Q psy11601 29 TLNIEVDGGVGPNTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~ 59 (82)
++...+.-|--.+.|.++.+ ++|.+|+|+.
T Consensus 81 ~~~~~v~~g~~~~~I~~~a~-~~dliV~G~~ 110 (138)
T 3idf_A 81 NPFVVIKEGEPVEMVLEEAK-DYNLLIIGSS 110 (138)
T ss_dssp CCEEEEEESCHHHHHHHHHT-TCSEEEEECC
T ss_pred CeEEEEecCChHHHHHHHHh-cCCEEEEeCC
Confidence 34455556666788888888 9999999964
No 455
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=67.27 E-value=11 Score=24.65 Aligned_cols=63 Identities=16% Similarity=0.096 Sum_probs=40.3
Q ss_pred chHHHHHHHHH----hCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccC----CCCHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRE----NYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVIN----CPDRIQAISTLKSSV 77 (82)
Q Consensus 15 ~~~~ki~~~~~----~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~----~~d~~~~~~~l~~~~ 77 (82)
..++-++++.+ ..++..|.+..=-+..++.++..+|+|.+-+.-.++. .+-....+++|.+-+
T Consensus 140 dG~~~v~~i~~~~~~~~~~t~ilaAS~R~~~~v~~~a~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~Dw 210 (212)
T 3r8r_A 140 NGLDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGAHIGTMPLKVIHALTKHPLTDKGIEQFLADW 210 (212)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEEBSCCSHHHHHHHHHTTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEecCCCHHHHHHHHHcCCCEEEcCHHHHHHHHcCCcHHHHHHHHHHHh
Confidence 34444555443 3456777777666777777888999998877766654 333345666666544
No 456
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=67.10 E-value=16 Score=24.89 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=32.8
Q ss_pred CCCCCcch--HHHHHHHHHhCCCCcEEEEcCCCcc-----------cHHHHHHcCCCEEEEeccc
Q psy11601 9 GQKFMQDM--MPKVKWLRENYPTLNIEVDGGVGPN-----------TIDECAKAGANWIVSGTAV 60 (82)
Q Consensus 9 gq~~~~~~--~~ki~~~~~~~~~~~i~~dGGI~~~-----------ni~~~~~~Gad~vv~gs~i 60 (82)
++...|.. .+||+.++.......+.+.|-.... ....|.++|||.+++-+.+
T Consensus 129 ~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~ 193 (295)
T 1s2w_A 129 AQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKK 193 (295)
T ss_dssp TCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCS
T ss_pred CCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 35566655 8888888765422334444443322 4668899999999886533
No 457
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=67.07 E-value=15 Score=20.91 Aligned_cols=59 Identities=7% Similarity=-0.001 Sum_probs=37.6
Q ss_pred chHHHHHHHHHhC--CCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENY--PTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~--~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++.. +++|+.+..+ -+.+.+....++||+.++ .++-++.+-...++..++
T Consensus 75 ~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l-----~KP~~~~~L~~~i~~~~~ 136 (149)
T 1i3c_A 75 DGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYL-----TKSRNLKDLFKMVQGIES 136 (149)
T ss_dssp CHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEE-----ECCSSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEE-----ECCCCHHHHHHHHHHHHH
Confidence 4566677777642 4677665554 456778889999999874 344455555555554443
No 458
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=66.59 E-value=17 Score=25.04 Aligned_cols=55 Identities=5% Similarity=0.021 Sum_probs=39.2
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEeccccC
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGTAVIN 62 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs~i~~ 62 (82)
+--|++.++.++.++++++.. ++||++++.+. .+.+..+++.| +|.+..--.-.+
T Consensus 214 ~iEqP~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~G 270 (368)
T 3q45_A 214 HCEEPVSRNLYTALPKIRQAC-RIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSA 270 (368)
T ss_dssp CEECCBCGGGGGGHHHHHHTC-SSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTT
T ss_pred EEECCCChhHHHHHHHHHhhC-CCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcC
Confidence 335778887888888888875 69999999874 55677777765 677666544443
No 459
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=66.44 E-value=17 Score=27.01 Aligned_cols=49 Identities=16% Similarity=0.167 Sum_probs=36.5
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEc------CC-------CcccHHHHHHcCCCEEEEecccc
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDG------GV-------GPNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dG------GI-------~~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
.+...+.++++++..++.++.+-+ |. ...+++...++|++.|-+-.++.
T Consensus 80 ~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~s 141 (539)
T 1rqb_A 80 NEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMN 141 (539)
T ss_dssp CCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehh
Confidence 578889999998876778887766 43 24467889999999887654443
No 460
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=65.99 E-value=14 Score=25.97 Aligned_cols=51 Identities=22% Similarity=0.154 Sum_probs=38.2
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEec
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGT 58 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs 58 (82)
+--|++.++.++.++++++.. ++||+++..+. .+.+..+++.| +|.+..--
T Consensus 234 ~iEqP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~ 286 (400)
T 3mwc_A 234 FHEQPLHYEALLDLKELGERI-ETPICLDESLISSRVAEFVAKLGISNIWNIKI 286 (400)
T ss_dssp CEESCSCTTCHHHHHHHHHHS-SSCEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred EEeCCCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcc
Confidence 445788888888899988875 58999999875 56677787766 66665543
No 461
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=65.91 E-value=11 Score=26.11 Aligned_cols=50 Identities=14% Similarity=0.030 Sum_probs=36.6
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEe
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~g 57 (82)
+--|++.++.++.++++++.. ++||++++.+. .+.+..+++.| +|.+..-
T Consensus 221 ~iEqP~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k 272 (377)
T 3my9_A 221 FIEQPVPRRHLDAMAGFAAAL-DTPILADESCFDAVDLMEVVRRQAADAISVK 272 (377)
T ss_dssp CEECCSCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHHHHHHHHTCCSEEECC
T ss_pred EEECCCCccCHHHHHHHHHhC-CCCEEECCccCCHHHHHHHHHcCCCCEEEec
Confidence 345778888888899988875 58999999865 45666777655 6666543
No 462
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=65.84 E-value=19 Score=25.92 Aligned_cols=52 Identities=6% Similarity=0.079 Sum_probs=40.9
Q ss_pred CCcEEEEcCCCcccHHHH-HHcCCCEEEEe-ccccC-CCCHHHHHHHHHHHHHHh
Q psy11601 29 TLNIEVDGGVGPNTIDEC-AKAGANWIVSG-TAVIN-CPDRIQAISTLKSSVQKY 80 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~-~~~Gad~vv~g-s~i~~-~~d~~~~~~~l~~~~~~~ 80 (82)
++-=++.|||+...++++ ...|.|.+..- ..+++ ++.++.-++.+|+.++..
T Consensus 330 ~~~PV~SGGih~~~~p~~~~~~G~D~vl~~GGG~~gHP~G~aaGa~A~R~A~eA~ 384 (414)
T 3fk4_A 330 KSFSVPSAGIHPGFVPFIVRDFGKDVVINAGGGIHGHPNGAQGGGKAFRTAIDAT 384 (414)
T ss_dssp CCEEEEESSCCGGGHHHHHHHHCSSBEEECGGGGGGSTTHHHHHHHHHHHHHHHH
T ss_pred CceeecCCCCCHhHHHHHHHHhCCcEEEEcCCcccCCCCChHHHHHHHHHHHHHH
Confidence 455678999999999865 55798877664 77998 556888889999888754
No 463
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=65.64 E-value=24 Score=25.58 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=34.6
Q ss_pred CcchHHHHHHHHHhCCCCcEEEEc------CCC-------cccHHHHHHcCCCEEEEecccc
Q psy11601 13 MQDMMPKVKWLRENYPTLNIEVDG------GVG-------PNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 13 ~~~~~~ki~~~~~~~~~~~i~~dG------GI~-------~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
.+...+.++++++..++.++.+-. |.+ ..+++...++|+|.|-+-.++.
T Consensus 63 ~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~s 124 (464)
T 2nx9_A 63 GEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMN 124 (464)
T ss_dssp CCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecC
Confidence 678889999998876677766553 332 3457888899999887654443
No 464
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=65.63 E-value=9.9 Score=26.47 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=38.5
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecc
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTA 59 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~ 59 (82)
|--|++.++.++.++++++.. ++||++|-.+ +.+.+..+++.| +|++..--.
T Consensus 231 ~iEqP~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~ 284 (393)
T 1wuf_A 231 MIEQPFGTKDFVDHAWLQKQL-KTRICLDENIRSVKDVEQAHSIGSCRAINLKLA 284 (393)
T ss_dssp EEECCSCSSCSHHHHHHHTTC-SSEEEECTTCCSHHHHHHHHHHTCCSEEEECTG
T ss_pred EEECCCCCcCHHHHHHHHHhC-CCCEEECCCcCCHHHHHHHHHhCCCCEEEeChh
Confidence 345788888888888888765 6899998876 566778887777 577666433
No 465
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=65.59 E-value=24 Score=24.35 Aligned_cols=46 Identities=13% Similarity=0.266 Sum_probs=34.9
Q ss_pred hHHHHHHHHHhC-CCCcEEEEc--CCCcccHHHHHHcCCCEEEEecccc
Q psy11601 16 MMPKVKWLRENY-PTLNIEVDG--GVGPNTIDECAKAGANWIVSGTAVI 61 (82)
Q Consensus 16 ~~~ki~~~~~~~-~~~~i~~dG--GI~~~ni~~~~~~Gad~vv~gs~i~ 61 (82)
.+++|+++++.. +++|++.=| |+..+.+++..+.|+.-+=+.+.+.
T Consensus 207 d~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~Tdl~ 255 (306)
T 3pm6_A 207 DYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVN 255 (306)
T ss_dssp CHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEESHHHH
T ss_pred CHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeChHHH
Confidence 455566666543 368888887 5778999999999999988887763
No 466
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=65.52 E-value=8.4 Score=26.14 Aligned_cols=54 Identities=15% Similarity=0.069 Sum_probs=34.3
Q ss_pred CCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEecc
Q psy11601 5 PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~ 59 (82)
|...|=|.....+.++.++.+...+-.+.+-.|-+. .+......|+++++++.+
T Consensus 170 pnIvgiKdssgd~~~~~~~~~~~~~~~f~v~~G~d~-~~l~~l~~G~~G~is~~a 223 (307)
T 3s5o_A 170 PNIVGMXDSGGDVTRIGLIVHKTRKQDFQVLAGSAG-FLMASYALGAVGGVCALA 223 (307)
T ss_dssp TTEEEEEECSCCHHHHHHHHHHTTTSSCEEEESSGG-GHHHHHHHTCCEEECGGG
T ss_pred CCEEEEEcCCCCHHHHHHHHHhccCCCeEEEeCcHH-HHHHHHHcCCCEEEechh
Confidence 445555555556677777654432223555666554 566677899999999966
No 467
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=65.42 E-value=6 Score=27.25 Aligned_cols=51 Identities=12% Similarity=0.210 Sum_probs=39.2
Q ss_pred CCCCCCCCCcchHHHHHHHHHhCC-CCcEEE----EcCCCcccHHHHHHcCCCEEE
Q psy11601 5 PGFGGQKFMQDMMPKVKWLRENYP-TLNIEV----DGGVGPNTIDECAKAGANWIV 55 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~~~-~~~i~~----dGGI~~~ni~~~~~~Gad~vv 55 (82)
++..|.....+..+.++.+++..+ ++||.+ +-|....|.....++||+.|=
T Consensus 169 ~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd 224 (345)
T 1nvm_A 169 ADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVD 224 (345)
T ss_dssp ECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEE
Confidence 456666654555556777888775 788888 569999999999999999763
No 468
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=65.38 E-value=23 Score=23.55 Aligned_cols=41 Identities=12% Similarity=0.187 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCCCcEEEEcCCCc----ccHHHHHHcCCCEEEEecc
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVGP----NTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~~----~ni~~~~~~Gad~vv~gs~ 59 (82)
+.++++.+.. ++|+.+..+-.. -++.+|.+.|++.++.+..
T Consensus 194 ~~~~~i~~~~-~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 194 EQVERLVDAV-SVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp HHHHHHHTTC-SSCBEEECBTTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred HHHHHHHHhC-CCCEEEEecCCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 4455555544 356555533222 5789999999999999876
No 469
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=65.21 E-value=9.5 Score=26.89 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=37.1
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEe
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSG 57 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~g 57 (82)
+--|++.++.++.++++++.. ++||.+++.+. .+.+..+++.| +|.+..-
T Consensus 208 ~iEeP~~~~d~~~~~~l~~~~-~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d 259 (405)
T 3rr1_A 208 FIEEPVLAEQAETYARLAAHT-HLPIAAGERMFSRFDFKRVLEAGGVSILQPD 259 (405)
T ss_dssp CEECSSCCSSTHHHHHHHTTC-SSCEEECTTCCSHHHHHHHHHHCCCSEECCB
T ss_pred EEECCCCcccHHHHHHHHhcC-CCCEEecCCcCCHHHHHHHHHHhCCCeEEEC
Confidence 445778788888888888875 69999999876 55677777766 6666443
No 470
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=65.16 E-value=20 Score=24.75 Aligned_cols=45 Identities=18% Similarity=0.302 Sum_probs=37.2
Q ss_pred chHHHHHHHHHhCCCCcEEEEc-----------------------CCCcccHHHHHHcCCCEEEEeccc
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDG-----------------------GVGPNTIDECAKAGANWIVSGTAV 60 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dG-----------------------GI~~~ni~~~~~~Gad~vv~gs~i 60 (82)
-.+++|+++++..+ +|++.=| |+..+.+++..+.|+.-+=+.+.+
T Consensus 189 L~~~~L~~I~~~~~-vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl 256 (305)
T 1rvg_A 189 IDHARLERIARLVP-APLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTDL 256 (305)
T ss_dssp CCHHHHHHHHHHCC-SCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTTEEEEEECHHH
T ss_pred cCHHHHHHHHHhcC-CCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCCCeEEEEChHH
Confidence 44677888888764 9999999 668999999999999988887765
No 471
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=65.11 E-value=8.7 Score=20.36 Aligned_cols=39 Identities=23% Similarity=0.194 Sum_probs=25.9
Q ss_pred chHHHHHHHHHhC--CCCcEEEEcCCCcccHHHHHHcCCCEEE
Q psy11601 15 DMMPKVKWLRENY--PTLNIEVDGGVGPNTIDECAKAGANWIV 55 (82)
Q Consensus 15 ~~~~ki~~~~~~~--~~~~i~~dGGI~~~ni~~~~~~Gad~vv 55 (82)
..++-++++++.. +++|+.+..+-.... .....|++.++
T Consensus 59 ~~~~~~~~l~~~~~~~~~~ii~~~~~~~~~--~~~~~g~~~~l 99 (119)
T 2j48_A 59 SCLLLLQHLREHQADPHPPLVLFLGEPPVD--PLLTAQASAIL 99 (119)
T ss_dssp THHHHHHHHHHTCCCSSCCCEEEESSCCSS--HHHHHHCSEEC
T ss_pred CHHHHHHHHHhccccCCCCEEEEeCCCCch--hhhhcCHHHhc
Confidence 4566677777764 567776666655544 77788888663
No 472
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=64.88 E-value=31 Score=23.70 Aligned_cols=47 Identities=15% Similarity=0.183 Sum_probs=31.0
Q ss_pred hHHHHHHHHHhCCCCcEE---EEcCCCc-ccHHHHHHcCCCEEEEeccccC
Q psy11601 16 MMPKVKWLRENYPTLNIE---VDGGVGP-NTIDECAKAGANWIVSGTAVIN 62 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~---~dGGI~~-~ni~~~~~~Gad~vv~gs~i~~ 62 (82)
..+.++++.+..++.|+. +.||-++ -+..+|.+.|++.++.+..++.
T Consensus 202 ~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~r 252 (307)
T 3lye_A 202 SKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLA 252 (307)
T ss_dssp CHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHH
T ss_pred CHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHH
Confidence 345666666543335553 3455443 4789999999999988876664
No 473
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=64.64 E-value=29 Score=23.30 Aligned_cols=72 Identities=15% Similarity=0.095 Sum_probs=39.7
Q ss_pred CCCCCCCCCcchHHHHH---HHHHh-CC-CCcEEE-EcCCCccc----HHHHHHcCCCEEEEeccccCCCCHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVK---WLREN-YP-TLNIEV-DGGVGPNT----IDECAKAGANWIVSGTAVINCPDRIQAISTLK 74 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~---~~~~~-~~-~~~i~~-dGGI~~~n----i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~ 74 (82)
-|..|+-+.-..-|+.+ .+.+. .. ++|+.+ .|+.+.+. .+...++|||.+.+....|..++..+..+-++
T Consensus 48 ~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~ 127 (301)
T 3m5v_A 48 VGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYK 127 (301)
T ss_dssp SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHH
T ss_pred CccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHH
Confidence 46667655433333322 23333 33 466554 33333322 23455689999999988877666555555454
Q ss_pred HH
Q psy11601 75 SS 76 (82)
Q Consensus 75 ~~ 76 (82)
+.
T Consensus 128 ~v 129 (301)
T 3m5v_A 128 AI 129 (301)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 474
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=64.63 E-value=18 Score=24.85 Aligned_cols=50 Identities=8% Similarity=-0.023 Sum_probs=35.1
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecccc
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
-|++. .++.++++++.. ++||++++.+ +.+.+.++++.| +|.+.+--.-.
T Consensus 220 EqP~~--d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 271 (378)
T 2qdd_A 220 EQPCQ--TLDQCAHVARRV-ANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRV 271 (378)
T ss_dssp ECCSS--SHHHHHHHHTTC-CSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred EcCCC--CHHHHHHHHHhC-CCCEEECCCcCCHHHHHHHHHhCCCCEEEeccccc
Confidence 34553 677788888765 6999999998 456777777665 77777654443
No 475
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=64.62 E-value=30 Score=23.50 Aligned_cols=72 Identities=17% Similarity=0.157 Sum_probs=40.1
Q ss_pred CCCCCCCCCcchHHHHH---HHHHh-CCCCcEEE-EcCCCccc----HHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVK---WLREN-YPTLNIEV-DGGVGPNT----IDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~---~~~~~-~~~~~i~~-dGGI~~~n----i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
-|..|.-+.-..-|+.+ .+.+. ..++||.+ .|+.+.+. .+...++|||.+.+....|..++..+..+-+++
T Consensus 63 ~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ 142 (315)
T 3si9_A 63 VGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSS 142 (315)
T ss_dssp SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 46666655433333322 22332 33566444 34433333 335668999999999988776665554444444
Q ss_pred H
Q psy11601 76 S 76 (82)
Q Consensus 76 ~ 76 (82)
.
T Consensus 143 v 143 (315)
T 3si9_A 143 I 143 (315)
T ss_dssp H
T ss_pred H
Confidence 3
No 476
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=64.46 E-value=8.3 Score=21.65 Aligned_cols=54 Identities=13% Similarity=-0.004 Sum_probs=34.2
Q ss_pred chHHHHHHHHHhC--CCCcEEEEcC-CCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHH
Q psy11601 15 DMMPKVKWLRENY--PTLNIEVDGG-VGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTL 73 (82)
Q Consensus 15 ~~~~ki~~~~~~~--~~~~i~~dGG-I~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l 73 (82)
..++-++++++.. +++|+.+..+ -+.+......+.|++.++. ++-++.+-.+.+
T Consensus 73 ~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~L~~~~ 129 (143)
T 2qvg_A 73 NGIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLNIRGHLI-----KPLDYGEAIKLF 129 (143)
T ss_dssp CHHHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHTTTTCCEEEE-----SSCCHHHHHHHH
T ss_pred CHHHHHHHHHcCccccCCcEEEEeCCCCHHHHHHHHhcCCCeEEE-----CCCCHHHHHHHH
Confidence 4566677777653 5677665544 5567778888999988753 344554444443
No 477
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=64.17 E-value=8.7 Score=21.01 Aligned_cols=59 Identities=10% Similarity=0.085 Sum_probs=36.8
Q ss_pred chHHHHHHHHHhC--CCCcEEEEcCC-CcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHHHHH
Q psy11601 15 DMMPKVKWLRENY--PTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78 (82)
Q Consensus 15 ~~~~ki~~~~~~~--~~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~~~~ 78 (82)
+.++-++++++.. +++|+.+..+- +.+......+.|++.++. ++-++.+-...++..++
T Consensus 60 ~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~l~~~i~~~~~ 121 (127)
T 2jba_A 60 SGIQFIKHLRRESMTRDIPVVMLTARGEEEDRVRGLETGADDCIT-----KPFSPKELVARIKAVMR 121 (127)
T ss_dssp EHHHHHHHHHTSTTTTTSCEEEEEETTHHHHHHTTCCCSCSEEEE-----ESCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHhcCCCeEEe-----CCCCHHHHHHHHHHHHh
Confidence 4566777777653 56777666553 455666777888887644 34456555555555544
No 478
>2qyg_A Ribulose bisphosphate carboxylase-like protein 2; beta-alpha-barrel, unknown function; 3.30A {Rhodopseudomonas palustris}
Probab=63.65 E-value=19 Score=26.27 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=39.6
Q ss_pred CCcEEEEcCCCcccHHHHHHc-C-CCEEEE-eccccC-CCCHHHHHHHHHHHHHH
Q psy11601 29 TLNIEVDGGVGPNTIDECAKA-G-ANWIVS-GTAVIN-CPDRIQAISTLKSSVQK 79 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~~~-G-ad~vv~-gs~i~~-~~d~~~~~~~l~~~~~~ 79 (82)
.+-=++.|||+...++.+.+. | .|.+.. |..+++ ++.++.-+..+++.++.
T Consensus 371 ~v~PV~SGGih~~~~p~l~~~~G~~Dvvl~~GGG~~gHP~G~aaGa~A~R~A~eA 425 (452)
T 2qyg_A 371 PCLPVPGGSDSAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGATSIRQAWDA 425 (452)
T ss_dssp CCEEEECSSCCTTTHHHHHHHHCSSCCEECCSTTTTTCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCccccchhhHHHHHHHhCCCCeEEEeCccccCCCCChHHHHHHHHHHHHH
Confidence 445678999999999977765 8 776654 477998 56799888899988764
No 479
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=63.51 E-value=13 Score=25.53 Aligned_cols=45 Identities=16% Similarity=-0.021 Sum_probs=31.8
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCC-CcccHHHHHHcC-CCEEEEecccc
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAG-ANWIVSGTAVI 61 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI-~~~ni~~~~~~G-ad~vv~gs~i~ 61 (82)
.++.++++++.. ++||++++.+ +++.+.++++.| +|.+.+--.-.
T Consensus 227 ~~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 273 (371)
T 2ps2_A 227 TWRECISLRRKT-DIPIIYDELATNEMSIVKILADDAAEGIDLKISKA 273 (371)
T ss_dssp SHHHHHHHHTTC-CSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHH
T ss_pred CHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhc
Confidence 566777777765 6999999998 456677777666 67776654333
No 480
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=63.48 E-value=8.7 Score=27.81 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=29.3
Q ss_pred CCcEEEEcCCCcccHHHHHH--cCC--CEEEEeccccC
Q psy11601 29 TLNIEVDGGVGPNTIDECAK--AGA--NWIVSGTAVIN 62 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~~--~Ga--d~vv~gs~i~~ 62 (82)
++.|++.+|++++.+.++.+ .|+ +.|-+|+.+.+
T Consensus 338 ~~~Ii~SdgLd~~~i~~l~~~~~g~~~d~FGVGT~L~~ 375 (449)
T 1ybe_A 338 TKMLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTN 375 (449)
T ss_dssp GSEEEECTTCCHHHHHHHHHHHTTTSEEEEEECHHHHC
T ss_pred ceEEEEeCCCCHHHHHHHHHHhcCCCceEEEeChhhcc
Confidence 57899999999999999998 777 67777788765
No 481
>1ykw_A Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum} SCOP: c.1.14.1 d.58.9.1 PDB: 1tel_A
Probab=63.35 E-value=21 Score=25.90 Aligned_cols=52 Identities=10% Similarity=0.081 Sum_probs=39.9
Q ss_pred CCCcEEEEcCCCcccHHHHHHc-C-CCEEEE-eccccC-CCCHHHHHHHHHHHHHH
Q psy11601 28 PTLNIEVDGGVGPNTIDECAKA-G-ANWIVS-GTAVIN-CPDRIQAISTLKSSVQK 79 (82)
Q Consensus 28 ~~~~i~~dGGI~~~ni~~~~~~-G-ad~vv~-gs~i~~-~~d~~~~~~~l~~~~~~ 79 (82)
+.+-=++.|||+...++.+.+. | .|.+.. |..+++ ++.++.-+..+|+.++.
T Consensus 350 ~~v~PV~SGGih~~~~p~l~~~~G~~Dvvl~~GGG~~gHP~G~aaGa~A~R~A~eA 405 (435)
T 1ykw_A 350 KPCLPVPGGSDSALTLQTVYEKVGNVDFGFVPGRGVFGHPMGPKAGAKSIRQAWEA 405 (435)
T ss_dssp CCCEEEEECSBCTTTHHHHHHHHCSSCSEECBSSSSSSCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCccccchhhHHHHHHHhCCCCeEEEeCCcccCCCCCcHHHHHHHHHHHHH
Confidence 3455678999999999977765 7 776554 477998 46788888889888764
No 482
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=63.21 E-value=30 Score=22.90 Aligned_cols=58 Identities=28% Similarity=0.161 Sum_probs=37.6
Q ss_pred hHHHHHHHHHhCCCCcEEEEcCCC--cccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 16 MMPKVKWLRENYPTLNIEVDGGVG--PNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~dGGI~--~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
..+-++++|+..|+.++-+.==++ .+-++.+.++|||.+.+...- .+++.+.++.+++
T Consensus 73 G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea--~~~~~~~i~~ir~ 132 (246)
T 3inp_A 73 GPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEA--SEHIDRSLQLIKS 132 (246)
T ss_dssp CHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGG--CSCHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEcccc--chhHHHHHHHHHH
Confidence 345566666665556666544343 235788999999999887433 2577777777764
No 483
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=62.98 E-value=8 Score=27.94 Aligned_cols=33 Identities=15% Similarity=0.055 Sum_probs=27.7
Q ss_pred Cc-EEEEcCCCcccHHHHH---HcCC--CEEEEeccccC
Q psy11601 30 LN-IEVDGGVGPNTIDECA---KAGA--NWIVSGTAVIN 62 (82)
Q Consensus 30 ~~-i~~dGGI~~~ni~~~~---~~Ga--d~vv~gs~i~~ 62 (82)
.. |++.+|++++.+.++. +.|+ +.|-+|+.+.+
T Consensus 333 ~k~Ii~SdgLd~~~i~~l~~~~~~~~~~d~FGVGT~L~~ 371 (441)
T 1vlp_A 333 SKIICYSDSLNVEKAITYSHAAKENGMLATFGIGTNFTN 371 (441)
T ss_dssp SSEEEECSSCCHHHHHHHHHHHHHTTCEEEEEECHHHHS
T ss_pred ceEEEEeCCCCHHHHHHHHHHHHcCCceEEEEeCchhee
Confidence 77 9999999999999999 5666 77777787765
No 484
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=62.97 E-value=31 Score=22.98 Aligned_cols=70 Identities=13% Similarity=-0.047 Sum_probs=39.8
Q ss_pred CCCCCCCCCcchHHHHHHHHHhCCCCc-EEEEcCCCcccH----HHHHHcCCCEEEEeccccCCC-CHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVKWLRENYPTLN-IEVDGGVGPNTI----DECAKAGANWIVSGTAVINCP-DRIQAISTLK 74 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~~~~~~-i~~dGGI~~~ni----~~~~~~Gad~vv~gs~i~~~~-d~~~~~~~l~ 74 (82)
-|..|+.+.-+.-|+.+-++....++| |.-.|+.+.+.. +...++|||.+.+....|..+ +..+..+-++
T Consensus 38 ~GttGE~~~Ls~~Er~~v~~~~~~rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~ 113 (283)
T 2pcq_A 38 YGSNGEGVHLTPEERARGLRALRPRKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYE 113 (283)
T ss_dssp TCTTTTGGGSCHHHHHHHHHTCCCSSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHH
T ss_pred CCcCcCchhcCHHHHHHHHHHHHhCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHH
Confidence 467777665444455443443222455 455666554333 345678999999998877544 4343333333
No 485
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=62.79 E-value=14 Score=25.23 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=32.2
Q ss_pred HHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHH
Q psy11601 18 PKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAIST 72 (82)
Q Consensus 18 ~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~ 72 (82)
+-++++++..|..+|+|-=- |.+.+.+..++|+|++-+.. |..++.++.++.
T Consensus 187 ~Av~~ar~~~~~~~IeVEv~-tl~ea~eAl~aGaD~I~LDn--~~~~~l~~av~~ 238 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEVEVT-NLDELNQAIAAKADIVMLDN--FSGEDIDIAVSI 238 (287)
T ss_dssp HHHHHHHHHCTTSCEEEEES-SHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCcEEEEeC-CHHHHHHHHHcCCCEEEEcC--CCHHHHHHHHHh
Confidence 44566666655566665222 66777788899999998865 433444444433
No 486
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=62.74 E-value=16 Score=25.39 Aligned_cols=51 Identities=14% Similarity=0.059 Sum_probs=38.0
Q ss_pred CCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEEec
Q psy11601 7 FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVSGT 58 (82)
Q Consensus 7 ~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~gs 58 (82)
+--|++.++.++.++++++.. ++||++|..+. ...+..+++.| +|.+..--
T Consensus 224 ~iEqP~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~ 276 (382)
T 3dgb_A 224 LIEQPISRNNRAGMVRLNASS-PAPIMADESIECVEDAFNLAREGAASVFALKI 276 (382)
T ss_dssp CEECCBCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHHHHHHHHTCCSEEEECH
T ss_pred eeeCCCCccCHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEecc
Confidence 445788888899999998876 68999998864 45677777655 67776543
No 487
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=62.49 E-value=34 Score=23.36 Aligned_cols=47 Identities=15% Similarity=0.137 Sum_probs=33.4
Q ss_pred hHHHHHHHHHhCCCCcEEE---EcCCC-cccHHHHHHcCCCEEEEeccccCC
Q psy11601 16 MMPKVKWLRENYPTLNIEV---DGGVG-PNTIDECAKAGANWIVSGTAVINC 63 (82)
Q Consensus 16 ~~~ki~~~~~~~~~~~i~~---dGGI~-~~ni~~~~~~Gad~vv~gs~i~~~ 63 (82)
..+.++++.+.. +.|+.+ .+|-+ .-+..+|.+.|++.++.+..+|.+
T Consensus 195 ~~ee~~~~~~~~-~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra 245 (298)
T 3eoo_A 195 TLDDYRRFKEAV-KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYRA 245 (298)
T ss_dssp SHHHHHHHHHHH-CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHHH
T ss_pred CHHHHHHHHHHc-CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHH
Confidence 466677766654 356543 35544 358999999999999999887753
No 488
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=62.48 E-value=7.9 Score=27.48 Aligned_cols=47 Identities=9% Similarity=0.044 Sum_probs=35.5
Q ss_pred CCCCCcchHHHHHHHHHhCCCCcEEEEcCCC-cccHHHHHHcC-CCEEEE
Q psy11601 9 GQKFMQDMMPKVKWLRENYPTLNIEVDGGVG-PNTIDECAKAG-ANWIVS 56 (82)
Q Consensus 9 gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~-~~ni~~~~~~G-ad~vv~ 56 (82)
-|++.++.++.++++++.. ++||++++.+. .+.+..+++.| +|.+..
T Consensus 260 EeP~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~ 308 (426)
T 4e4f_A 260 EDPTPAENQACFRLIRQHT-VTPIAVGEVFNSIWDCKQLIEEQLIDYIRT 308 (426)
T ss_dssp ECCSCCSSGGGGHHHHTTC-CSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred ECCCChHHHHHHHHHHhcC-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 4677777777778888765 68999999976 66788888877 566543
No 489
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=62.04 E-value=11 Score=25.50 Aligned_cols=53 Identities=9% Similarity=0.124 Sum_probs=36.0
Q ss_pred CCCCCCCCcchHHHHHHH---HHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccc
Q psy11601 6 GFGGQKFMQDMMPKVKWL---RENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAV 60 (82)
Q Consensus 6 G~~gq~~~~~~~~ki~~~---~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i 60 (82)
|..++...|..+.-++++ .+.. .+++.+-.+ +++.++.+...|.+.+++++..
T Consensus 206 g~~~~~~~p~v~~a~~~iv~aaraa-G~~~gv~~~-d~~~a~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 206 GYAGNPQHPEVQAAIEQAIVQIRES-GKAPGILIA-NEQLAKRYLELGALFVAVGVDT 261 (287)
T ss_dssp TSTTCCCSHHHHHHHHHHHHHHHHT-TSEEEEECC-CHHHHHHHHHTTCSEEEEEEHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHc-CCeeEEecC-CHHHHHHHHHhCCCEEEECcHH
Confidence 555666667666555543 2232 455555544 8888999999999999999763
No 490
>3c98_A Syntaxin-binding protein 1; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus} PDB: 3puj_A
Probab=61.95 E-value=0.45 Score=35.22 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=29.7
Q ss_pred CcEEEEcCCCcccHHHHHHc-----CCCEEEEeccccCCCCHHHHHH
Q psy11601 30 LNIEVDGGVGPNTIDECAKA-----GANWIVSGTAVINCPDRIQAIS 71 (82)
Q Consensus 30 ~~i~~dGGI~~~ni~~~~~~-----Gad~vv~gs~i~~~~d~~~~~~ 71 (82)
+-|.+.||+|-+.++.+... +.++++.++.|.++.+.-+.++
T Consensus 549 iIVFvvGGvTy~E~~~l~~ls~~~~~~~viiGsT~Iln~~~fl~~L~ 595 (606)
T 3c98_A 549 LIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLK 595 (606)
T ss_dssp EEEEEETCEEHHHHHHHHHHHHHHSSCEEEEEESSEECHHHHHHHHT
T ss_pred EEEEEECCcCHHHHHHHHHHHHHcCCcEEEEEeCCeeCHHHHHHHHH
Confidence 56889999999988866432 4677887888996654444433
No 491
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=61.94 E-value=18 Score=20.84 Aligned_cols=41 Identities=10% Similarity=0.180 Sum_probs=33.5
Q ss_pred CCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHHHHHHHHH
Q psy11601 29 TLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLK 74 (82)
Q Consensus 29 ~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~ 74 (82)
.+.+++.|+|...-...|.++|+..+.. ...++.++++++.
T Consensus 65 gv~~vi~~~iG~~a~~~L~~~GI~v~~~-----~~~~i~eal~~~~ 105 (124)
T 1eo1_A 65 GVKAVIASSPGPNAFEVLNELGIKIYRA-----TGTSVEENLKLFT 105 (124)
T ss_dssp TCCEEEECCSSHHHHHHHHHHTCEEEEC-----CSCCHHHHHHHHH
T ss_pred CCCEEEECCcCHHHHHHHHHCCCEEEEc-----CCCCHHHHHHHHH
Confidence 5899999999999999999999997763 2357777777665
No 492
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=61.88 E-value=33 Score=22.98 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=39.9
Q ss_pred CCCCCCCCCcchHHHHH---HHHHh-CCCCcEEE-EcCCCccc----HHHHHHcCCCEEEEeccccCCCCHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKVK---WLREN-YPTLNIEV-DGGVGPNT----IDECAKAGANWIVSGTAVINCPDRIQAISTLKS 75 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~---~~~~~-~~~~~i~~-dGGI~~~n----i~~~~~~Gad~vv~gs~i~~~~d~~~~~~~l~~ 75 (82)
-|..|.-+.-..-|+.+ .+.+. ..++|+.+ .|+.+.+. .+...++|||.+.+....|..++..+..+-+++
T Consensus 48 ~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ 127 (297)
T 3flu_A 48 VGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKT 127 (297)
T ss_dssp SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 36666655433333322 22332 34566554 33333332 345567999999999888776665554444444
Q ss_pred H
Q psy11601 76 S 76 (82)
Q Consensus 76 ~ 76 (82)
.
T Consensus 128 v 128 (297)
T 3flu_A 128 I 128 (297)
T ss_dssp H
T ss_pred H
Confidence 3
No 493
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=61.77 E-value=17 Score=24.35 Aligned_cols=53 Identities=17% Similarity=0.085 Sum_probs=32.0
Q ss_pred CCCCCCCCCcchHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEecc
Q psy11601 5 PGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTA 59 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~ 59 (82)
|...|-|.....+.++.++++..++ .+.+-.| +.+.+......|+++++++.+
T Consensus 155 pnIvgiK~s~gd~~~~~~~~~~~~~-~f~v~~G-~d~~~~~~l~~G~~G~is~~~ 207 (292)
T 2vc6_A 155 PNVKGVXDATGNLLRPSLERMACGE-DFNLLTG-EDGTALGYMAHGGHGCISVTA 207 (292)
T ss_dssp TTEEEEEECSCCTHHHHHHHHHSCT-TSEEEES-CGGGHHHHHHTTCCEEEESGG
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCC-CEEEEEC-chHHHHHHHHcCCCEEEecHH
Confidence 4444444444455566665554331 2344455 455677788999999999866
No 494
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=61.72 E-value=36 Score=23.43 Aligned_cols=42 Identities=26% Similarity=0.344 Sum_probs=31.5
Q ss_pred chHHHHHHHHHhCCCCcEEEE-cCCCcccHHHHHHcCCCEEEE
Q psy11601 15 DMMPKVKWLRENYPTLNIEVD-GGVGPNTIDECAKAGANWIVS 56 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~d-GGI~~~ni~~~~~~Gad~vv~ 56 (82)
+.++-++++++..+++|+.+. +--+.+.+.+..+.||+.++.
T Consensus 58 dG~ell~~lr~~~~~~pvIvlT~~~~~~~~~~a~~~Ga~dyl~ 100 (387)
T 1ny5_A 58 NGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLT 100 (387)
T ss_dssp BHHHHHHHHHHHCTTSEEEEEEETTCHHHHHHHHTTTCCEEEE
T ss_pred CHHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHhcCceEEec
Confidence 467778888887777776554 445677888999999998764
No 495
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=61.72 E-value=11 Score=26.80 Aligned_cols=34 Identities=12% Similarity=0.009 Sum_probs=28.4
Q ss_pred C-cEEEEcCCCcccHHHHHH--cCC--CEEEEeccccCC
Q psy11601 30 L-NIEVDGGVGPNTIDECAK--AGA--NWIVSGTAVINC 63 (82)
Q Consensus 30 ~-~i~~dGGI~~~ni~~~~~--~Ga--d~vv~gs~i~~~ 63 (82)
+ .|++.+|++++.+.++.+ .|+ |.|-+|+.+.+.
T Consensus 313 ~K~Iv~SdgLde~~i~~l~~~~~~~~~d~FGVGT~L~~~ 351 (408)
T 1yir_A 313 TKTLVFSDGLDLPRALKIYRALQGRINVSFGIGTHFTCD 351 (408)
T ss_dssp GSEEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSC
T ss_pred ceEEEECCCCCHHHHHHHHHHhcCCCceEEEeChhhccC
Confidence 6 699999999999999988 666 778888887653
No 496
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=61.62 E-value=17 Score=24.78 Aligned_cols=42 Identities=24% Similarity=0.407 Sum_probs=0.0
Q ss_pred cchHHHHHHHHHhCCCCcEEEEc----CCC----cccHHHHHHcCCCEEEE
Q psy11601 14 QDMMPKVKWLRENYPTLNIEVDG----GVG----PNTIDECAKAGANWIVS 56 (82)
Q Consensus 14 ~~~~~ki~~~~~~~~~~~i~~dG----GI~----~~ni~~~~~~Gad~vv~ 56 (82)
.+++..++++.+-. +.||.+|. |.+ .+|+..+.++||+++-+
T Consensus 64 ~em~~~~~~I~~~~-~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 64 DDVLTDIRRITDVC-SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp HHHHHHHHHHHHHC-CSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHhhC-CCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEE
No 497
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=61.56 E-value=9.5 Score=25.14 Aligned_cols=27 Identities=26% Similarity=0.423 Sum_probs=22.3
Q ss_pred EEEEcCCCcccHHHHHHcCCCEEEEec
Q psy11601 32 IEVDGGVGPNTIDECAKAGANWIVSGT 58 (82)
Q Consensus 32 i~~dGGI~~~ni~~~~~~Gad~vv~gs 58 (82)
|.+.||-..+-+.+..+.|||.++.|-
T Consensus 168 VAv~~GsG~~~~~~a~~~gaD~~iTGd 194 (247)
T 1nmo_A 168 VAWCTGGGQSFIDSAARFGVDAFITGE 194 (247)
T ss_dssp EEECSSSCGGGHHHHHHHCCSEEEESC
T ss_pred EEEECCCcHHHHHHHHHcCCCEEEEcC
Confidence 567778777888888899999999884
No 498
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=61.53 E-value=33 Score=22.83 Aligned_cols=71 Identities=11% Similarity=-0.014 Sum_probs=40.9
Q ss_pred CCCCCCCCCcchHHHH---HHHHHhCCCCcEEEEcCCCccc----HHHHHHcCCCEEEEeccccCC-CCHHHHHHHHHHH
Q psy11601 5 PGFGGQKFMQDMMPKV---KWLRENYPTLNIEVDGGVGPNT----IDECAKAGANWIVSGTAVINC-PDRIQAISTLKSS 76 (82)
Q Consensus 5 pG~~gq~~~~~~~~ki---~~~~~~~~~~~i~~dGGI~~~n----i~~~~~~Gad~vv~gs~i~~~-~d~~~~~~~l~~~ 76 (82)
-|..|.-+.-..-|+. +.+.+.... -|.-.|+.+.+. .+...++|||.+.+....|.. ++..+..+-+++.
T Consensus 39 ~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~v 117 (286)
T 2r91_A 39 AGTTGLGPALSLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDL 117 (286)
T ss_dssp TSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHH
T ss_pred CccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHH
Confidence 4666665543333332 234444444 455555555333 334556899999999888776 6665555555543
No 499
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=61.48 E-value=14 Score=24.45 Aligned_cols=50 Identities=14% Similarity=0.194 Sum_probs=35.3
Q ss_pred chHHHHHHHHHhCCCCcEEEEcCCCcccHHHHHHcCCCEEEEeccccCCCCHH
Q psy11601 15 DMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRI 67 (82)
Q Consensus 15 ~~~~ki~~~~~~~~~~~i~~dGGI~~~ni~~~~~~Gad~vv~gs~i~~~~d~~ 67 (82)
..+.+++++++.. ++ -...+|-+.+ +....+.|++.+=+|++||+..++.
T Consensus 176 ~~f~~l~~l~~~l-~~-~~lSmGmS~d-~~~Ai~~G~t~vRvGtaIfg~r~~~ 225 (244)
T 3r79_A 176 PHFALLAKLAGQC-GL-EKLSMGMSGD-FETAVEFGATSVRVGSAIFGSRAEN 225 (244)
T ss_dssp HHHHHHHHHHHHH-TC-CEEECCCTTT-HHHHHHTTCSEEEECHHHHCCHHHH
T ss_pred HHHHHHHHHHHhC-CC-CEEEeecchh-HHHHHHcCCCEEEeeHHHhCCCchh
Confidence 4566777766543 23 3677886665 4455689999999999999866444
No 500
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=61.30 E-value=33 Score=22.79 Aligned_cols=68 Identities=13% Similarity=0.030 Sum_probs=42.8
Q ss_pred CCcchHHHHHHHHHh---C-C--CCcEEEEcCC-CcccHHHHHHcCCCEEEEec-cccCCCCHHHHHHHHHHHHHH
Q psy11601 12 FMQDMMPKVKWLREN---Y-P--TLNIEVDGGV-GPNTIDECAKAGANWIVSGT-AVINCPDRIQAISTLKSSVQK 79 (82)
Q Consensus 12 ~~~~~~~ki~~~~~~---~-~--~~~i~~dGGI-~~~ni~~~~~~Gad~vv~gs-~i~~~~d~~~~~~~l~~~~~~ 79 (82)
++|..++-|.+.+++ . . .+-.+..|.= ..+.+++++..|||-++..+ .-|..-|+......|.+.+++
T Consensus 35 lnp~d~~ale~A~~Lke~~g~~~~V~av~~G~~~~~~~lr~ala~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~ 110 (264)
T 1o97_C 35 LNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKK 110 (264)
T ss_dssp ECHHHHHHHHHHHHHHHHCSSCCEEEEEEESCGGGHHHHHHHHHTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhcCCCceEEEEEeCchhHHHHHHHHHhcCCCEEEEEcCcccccCCHHHHHHHHHHHHHh
Confidence 455555555554443 2 2 3455666742 34577888999999888774 466656777666666666554
Done!