RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11601
         (82 letters)



>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice
           (Oryza sativa) [TaxId: 4530]}
          Length = 220

 Score = 82.6 bits (203), Expect = 6e-22
 Identities = 46/79 (58%), Positives = 61/79 (77%)

Query: 1   MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAV 60
           MTVEPGFGGQKFM +MM KV+ LR+ YP+L+IEVDGG+GP+TID  A AGAN IV+G+++
Sbjct: 140 MTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSI 199

Query: 61  INCPDRIQAISTLKSSVQK 79
               +  + IS L+ SV+ 
Sbjct: 200 FGAAEPGEVISALRKSVEG 218


>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato
           (Solanum tuberosum) [TaxId: 4113]}
          Length = 230

 Score = 80.9 bits (199), Expect = 3e-21
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 1   MTVEPGFGGQKFMQDMMPKVK----WLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVS 56
           M+V PGFGGQ F++  + K+        E      IEVDGGVGP    +  +AGAN +V+
Sbjct: 147 MSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVA 206

Query: 57  GTAVINCPDRIQAISTLKSSVQK 79
           G+AV   PD  +AI  +K+S + 
Sbjct: 207 GSAVFGAPDYAEAIKGIKTSKRP 229


>d1tqxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Plasmodium
           falciparum [TaxId: 5833]}
          Length = 221

 Score = 79.9 bits (196), Expect = 7e-21
 Identities = 45/80 (56%), Positives = 55/80 (68%)

Query: 1   MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAV 60
           MTVEPGFGGQ FM DMM KV +LR+ Y  LNI+VDGG+   T +  A  GAN IV+GT++
Sbjct: 142 MTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAGTSI 201

Query: 61  INCPDRIQAISTLKSSVQKY 80
            N  D    I T++ SVQKY
Sbjct: 202 FNAEDPKYVIDTMRVSVQKY 221


>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase
           {Synechocystis sp. PCC 6803 [TaxId: 1148]}
          Length = 221

 Score = 77.5 bits (190), Expect = 5e-20
 Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 4/82 (4%)

Query: 1   MTVEPGFGGQKFMQDMMPKVKWLRENYPT----LNIEVDGGVGPNTIDECAKAGANWIVS 56
           M+V PGFGGQ F+ +++PK++ LR+          IEVDGG+ PN   +  +AGAN IV+
Sbjct: 139 MSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVA 198

Query: 57  GTAVINCPDRIQAISTLKSSVQ 78
           G+AV N P+  +AI+ +++S +
Sbjct: 199 GSAVFNAPNYAEAIAGVRNSKR 220


>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase
           {Streptococcus pyogenes [TaxId: 1314]}
          Length = 217

 Score = 70.5 bits (172), Expect = 3e-17
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 4/81 (4%)

Query: 1   MTVEPGFGGQKFMQDMMPKVK----WLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVS 56
           MTV PGFGGQ F+ + + KV     W  E   + +IEVDGGV   TI  C +AGAN  V+
Sbjct: 136 MTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVA 195

Query: 57  GTAVINCPDRIQAISTLKSSV 77
           G+ +    D +  + TL++++
Sbjct: 196 GSYLFKASDLVSQVQTLRTAL 216


>d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase
           {Escherichia coli [TaxId: 562]}
          Length = 213

 Score = 69.1 bits (168), Expect = 8e-17
 Identities = 10/80 (12%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 1   MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAV 60
            + +    G  + +  +  +K L        + V GG+    +        +  ++G ++
Sbjct: 135 RSRDAQAAGVAWGEADITAIKRLS--DMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSI 192

Query: 61  INCPDRIQAISTLKSSVQKY 80
            +    ++A    K S+ + 
Sbjct: 193 RDAASPVEAARQFKRSIAEL 212


>d2czda1 c.1.2.3 (A:1-206) Orotidine 5'-monophosphate decarboxylase
           (OMP decarboxylase) {Pyrococcus horikoshii [TaxId:
           53953]}
          Length = 206

 Score = 39.2 bits (90), Expect = 1e-05
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 1   MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP--NTIDECAKAGANWIVSGT 58
           +  E    G         ++ ++R+        +  G+G       +  KAGA++I+ G 
Sbjct: 127 VANEIEPFGVIAPGTRPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVGR 186

Query: 59  AVINCPDRIQAISTLKSSVQ 78
           A+ N P+  +A   +   ++
Sbjct: 187 AIYNAPNPREAAKAIYDEIR 206


>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid
           phosphoribosyltransferase (Nicotinate-nucleotide
           pyrophosphorylase, NadC), C-terminal domain {Thermotoga
           maritima [TaxId: 2336]}
          Length = 170

 Score = 36.6 bits (84), Expect = 7e-05
 Identities = 7/45 (15%), Positives = 19/45 (42%)

Query: 13  MQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSG 57
            +++    + +++  P + +EV GG+    +        + I S 
Sbjct: 109 PEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISSS 153


>d1km4a_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP
           decarboxylase) {Archaeon Methanobacterium
           thermoautotrophicum [TaxId: 145262]}
          Length = 212

 Score = 33.0 bits (74), Expect = 0.002
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 1   MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGP-NTIDECAKAGANWIVSGTA 59
           M V+ G            ++  LRE     +  +  GVG            A+ I+ G +
Sbjct: 135 MGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRS 194

Query: 60  VINCPDRIQAISTLKSSV 77
           +    +   A + +  S+
Sbjct: 195 IYLADNPAAAAAGIIESI 212


>d1dbta_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP
           decarboxylase) {Bacillus subtilis [TaxId: 1423]}
          Length = 237

 Score = 31.0 bits (69), Expect = 0.009
 Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 5/77 (6%)

Query: 7   FGGQKFMQDMMPKVKWLRENYPTLNI-----EVDGGVGPNTIDECAKAGANWIVSGTAVI 61
                     + +         T  I       +  V   T     + G++ IV G ++ 
Sbjct: 159 VVCSVHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSIT 218

Query: 62  NCPDRIQAISTLKSSVQ 78
              D ++A   ++   +
Sbjct: 219 KAEDPVKAYKAVRLEWE 235


>d1viza_ c.1.4.1 (A:) PcrB protein homolog YerE {Bacillus subtilis
           [TaxId: 1423]}
          Length = 229

 Score = 29.7 bits (66), Expect = 0.026
 Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 3/63 (4%)

Query: 8   GGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRI 67
            G     + + K K + E          GG+      +     A+ IV G AV    DR 
Sbjct: 163 SGVLGDIEAVKKTKAVLETSTLF---YGGGIKDAETAKQYAEHADVIVVGNAVYEDFDRA 219

Query: 68  QAI 70
              
Sbjct: 220 LKT 222


>d1eixa_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP
           decarboxylase) {Escherichia coli [TaxId: 562]}
          Length = 231

 Score = 28.7 bits (63), Expect = 0.052
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 31  NIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78
             E        T ++   AG +++V G  V    D  Q +  + +S+Q
Sbjct: 184 GSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQ 231


>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus
           influenzae [TaxId: 727]}
          Length = 212

 Score = 27.2 bits (60), Expect = 0.18
 Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 17  MPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQA 69
           +  +K L   Y  L I   GG+G + I +           G+  +     IQ+
Sbjct: 142 VKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACGGSWFVE-KKLIQS 193


>d1vqta1 c.1.2.3 (A:1-198) Orotidine 5'-monophosphate decarboxylase
           (OMP decarboxylase) {Thermotoga maritima [TaxId: 2336]}
          Length = 198

 Score = 27.0 bits (59), Expect = 0.20
 Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 12  FMQDMMPKVKWLRENYPTLNIEVDGGVGPNTID-ECAKAGANWIVSGTAVINCPDRIQAI 70
                + +    +   P + +EV      + +  E  K  AN+ V G  +    +  + I
Sbjct: 134 PWAKALREKIKGKILVPGIRMEVKADDQKDVVTLEEMKGIANFAVLGREIYLSENPREKI 193

Query: 71  STLK 74
             +K
Sbjct: 194 KRIK 197


>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima
           [TaxId: 2336]}
          Length = 202

 Score = 26.9 bits (59), Expect = 0.25
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 17  MPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINC-PDRIQAISTLKS 75
              VK ++  +P +     GGV  + + E  KAG   +  G+A++   PD ++  +  K+
Sbjct: 137 PQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKA--KA 194

Query: 76  SVQKY 80
            V+K 
Sbjct: 195 FVEKI 199


>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus
           lactis, isozyme B [TaxId: 1358]}
          Length = 311

 Score = 26.9 bits (58), Expect = 0.26
 Identities = 13/70 (18%), Positives = 23/70 (32%)

Query: 1   MTVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAV 60
             +  G  G       +  +  + ++     I + G      + E   AGA+ +  GTA 
Sbjct: 214 ANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVGTAN 273

Query: 61  INCPDRIQAI 70
              P     I
Sbjct: 274 FADPFVCPKI 283


>d2nr7a1 d.2.1.9 (A:1-192) Putative secretion activator PG0293
           {Porphyromonas gingivalis [TaxId: 837]}
          Length = 192

 Score = 26.6 bits (58), Expect = 0.32
 Identities = 7/36 (19%), Positives = 14/36 (38%), Gaps = 3/36 (8%)

Query: 20  VKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIV 55
           +   +     L ++ DG VG  T+     A  + + 
Sbjct: 103 IVIPQR---ILGVQADGIVGNKTLQAVNSADPDELF 135


>d1thfd_ c.1.2.1 (D:) Cyclase subunit (or domain) of
           imidazoleglycerolphosphate synthase HisF {Thermotoga
           maritima [TaxId: 2336]}
          Length = 253

 Score = 25.9 bits (56), Expect = 0.50
 Identities = 12/52 (23%), Positives = 18/52 (34%)

Query: 20  VKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQAIS 71
           V+ + E          G     T  E    GA+ +   TA +  P  I  I+
Sbjct: 66  VEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIA 117


>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate
           2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]}
          Length = 222

 Score = 25.2 bits (54), Expect = 1.1
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 2   TVEPGFGGQKFMQDMMPKVKWLRENYPTLNIEV--DGGVG-PNTIDECAKAGANWIVSGT 58
           T+       +         ++L++   +++ +V  +G V  P+        G +  V G 
Sbjct: 146 TLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGG 205

Query: 59  AVINCPDRI 67
           A+   P  I
Sbjct: 206 AITR-PKEI 213


>d2ikba1 d.2.1.9 (A:1-163) Hypothetical protein NMB1012 {Neisseria
           meningitidis [TaxId: 487]}
          Length = 163

 Score = 24.1 bits (52), Expect = 1.9
 Identities = 5/36 (13%), Positives = 13/36 (36%), Gaps = 3/36 (8%)

Query: 20  VKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIV 55
            + L+       +  DG +G  ++        N ++
Sbjct: 94  ARMLQR---AAGVPDDGVIGAVSLKAINSLPENDLL 126


>d1a53a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS
           {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
          Length = 247

 Score = 24.3 bits (52), Expect = 2.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 40  PNTIDECAKAGANWIVSGTAVINCPDRIQ 68
            N I+E  K G N  + G++++  P++I+
Sbjct: 215 RNEIEELRKLGVNAFLIGSSLMRNPEKIK 243


>d2f6ua1 c.1.4.1 (A:1001-1231) (S)-3-O-geranylgeranylglyceryl
           phosphate synthase {Archaeon Archaeoglobus fulgidus
           [TaxId: 2234]}
          Length = 231

 Score = 24.3 bits (52), Expect = 2.3
 Identities = 7/57 (12%), Positives = 17/57 (29%), Gaps = 2/57 (3%)

Query: 7   FGGQKFMQDMMPKVKWLRENYPTLNIEVDGGV-GPNTIDECAKAGANWIVSGTAVIN 62
           +            V  +++      +   GG+       E  +  A+ I+ G  +  
Sbjct: 165 YIEYSGTYGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGNVIYE 220


>d1dqwa_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP
           decarboxylase) {Baker's yeast (Saccharomyces cerevisiae)
           [TaxId: 4932]}
          Length = 267

 Score = 24.0 bits (51), Expect = 2.6
 Identities = 5/28 (17%), Positives = 12/28 (42%)

Query: 42  TIDECAKAGANWIVSGTAVINCPDRIQA 69
           T+D+    G++ I+ G  +       + 
Sbjct: 219 TVDDVVSTGSDIIIVGRGLFAKGRDAKV 246


>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId:
           562]}
          Length = 213

 Score = 23.7 bits (51), Expect = 2.7
 Identities = 6/54 (11%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 16  MMPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQA 69
            +  ++ +   +  +     GG+ P    +     +   + G+ ++   D ++A
Sbjct: 142 GVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIGGSWLVP-ADALEA 194


>g1jmu.1 e.35.1.1 (A:,B:) Membrane penetration protein mu1 {Reovirus
           [TaxId: 10891]}
          Length = 666

 Score = 24.1 bits (52), Expect = 2.7
 Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 21  KWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVIN 62
            WLR    T+       V  NT           +  GT V+N
Sbjct: 323 TWLRMIPKTMGTLFQIQVTDNT----GTNWHFNLRGGTRVVN 360


>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate
           2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]}
          Length = 230

 Score = 24.0 bits (51), Expect = 2.9
 Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 3/68 (4%)

Query: 6   GFGGQKFMQDMMPKVKWLRENYPTLNIEV--DGGVG-PNTIDECAKAGANWIVSGTAVIN 62
             G   + +        L E      I V  +G +  P    +    G   IV G A+  
Sbjct: 158 LSGYTPYSRQEAGPDVALIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR 217

Query: 63  CPDRIQAI 70
             +  +  
Sbjct: 218 PKEIAERF 225


>d2q22a1 d.365.1.1 (A:8-138) Uncharacterized protein Ava3019
          {Anabaena variabilis [TaxId: 1172]}
          Length = 131

 Score = 23.2 bits (50), Expect = 3.9
 Identities = 3/30 (10%), Positives = 11/30 (36%), Gaps = 3/30 (10%)

Query: 51 ANWIVSGTAVINCPDRIQAISTLKSSVQKY 80
          +++ + G   I      + +  +K+     
Sbjct: 42 SDYQILG---ICADTADEGLLAMKTYSHAL 68


>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate
           desuccinylase, catalytic domain {Neisseria meningitidis
           [TaxId: 487]}
          Length = 262

 Score = 23.4 bits (49), Expect = 4.9
 Identities = 7/40 (17%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 11  KFMQDMMPKVKWLRENYPTLNI-EVDGGVGPNTIDECAKA 49
           +F++ M  ++  L        I +++  V  N I + +  
Sbjct: 216 RFIKAMAQELIEL--GPSNATIHQINENVRLNDIPKLSAV 253


>d1i4na_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS
           {Thermotoga maritima [TaxId: 2336]}
          Length = 251

 Score = 23.1 bits (49), Expect = 5.5
 Identities = 3/31 (9%), Positives = 16/31 (51%)

Query: 48  KAGANWIVSGTAVINCPDRIQAISTLKSSVQ 78
           +   N ++ GT+++   +  + +  +++  +
Sbjct: 221 RGKVNAVLVGTSIMKAENPRRFLEEMRAWSE 251


>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding
           protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 529

 Score = 23.0 bits (49), Expect = 6.7
 Identities = 7/53 (13%), Positives = 15/53 (28%)

Query: 17  MPKVKWLRENYPTLNIEVDGGVGPNTIDECAKAGANWIVSGTAVINCPDRIQA 69
             + +   E    LN +V G     + +       ++    T V+        
Sbjct: 78  KNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPEST 130


>d3tdta_ b.81.1.2 (A:) Tetrahydrodipicolinate-N-succinlytransferase,
           THDP-succinlytransferase, DapD {Mycobacterium bovis
           [TaxId: 1765]}
          Length = 274

 Score = 22.6 bits (48), Expect = 7.1
 Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 7/44 (15%)

Query: 27  YPTLNIEVDGGVGPNT-------IDECAKAGANWIVSGTAVINC 63
                + +   V   T       +  CA+ G N  +SG   I  
Sbjct: 123 LMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGG 166


>d1ka9f_ c.1.2.1 (F:) Cyclase subunit (or domain) of
           imidazoleglycerolphosphate synthase HisF {Thermus
           thermophilus [TaxId: 274]}
          Length = 251

 Score = 22.8 bits (48), Expect = 7.5
 Identities = 9/76 (11%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 10  QKFMQDMMPKVKWLRENYPTLNIEVDGGVGPNTIDEC---AKAGANWIVSGTAVINCPDR 66
               ++    +  +      + I +  G G  ++++      +GA+ +   +A +  P+ 
Sbjct: 53  SATHEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPEL 112

Query: 67  IQAISTLKSSVQKYLS 82
           I+ ++    +    L+
Sbjct: 113 IRELADHFGAQAVVLA 128


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.134    0.411 

Gapped
Lambda     K      H
   0.267   0.0588    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 317,909
Number of extensions: 12515
Number of successful extensions: 82
Number of sequences better than 10.0: 1
Number of HSP's gapped: 79
Number of HSP's successfully gapped: 34
Length of query: 82
Length of database: 2,407,596
Length adjustment: 48
Effective length of query: 34
Effective length of database: 1,748,556
Effective search space: 59450904
Effective search space used: 59450904
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.2 bits)