BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11602
(1083 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328711565|ref|XP_003244573.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like, partial
[Acyrthosiphon pisum]
Length = 232
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/234 (80%), Positives = 206/234 (88%), Gaps = 12/234 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DDKYLIATSEQPI A+HRD WLPEAS PIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK
Sbjct: 1 DDKYLIATSEQPIAALHRDQWLPEASFPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 60
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFVLTSP D++SW + DEMI NS +FY DLGIAYRVVNIVSGALNHAAAKKLDLEAWF
Sbjct: 61 VEQFVLTSPFDNQSWILFDEMINNSRQFYDDLGIAYRVVNIVSGALNHAAAKKLDLEAWF 120
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATTRVICAILET 189
PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK+ + ATACATTRVICAILET
Sbjct: 121 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKVDYVHMLNATACATTRVICAILET 180
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
+QTETG+++P+ L+K++P Y + EIPFVK+APIDEE+TKKQKKQKEGMK K
Sbjct: 181 YQTETGIKVPEILKKYLPTRYQD---EIPFVKSAPIDEEDTKKQKKQKEGMKNK 231
Score = 325 bits (834), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 154/187 (82%), Positives = 171/187 (91%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSP D++SW DEMI NS +FY DLGIAYRVVNIVSGALN
Sbjct: 48 DTRGIFRVHQFEKVEQFVLTSPFDNQSWILFDEMINNSRQFYDDLGIAYRVVNIVSGALN 107
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAAAKKLDLEAWFPGSGAFRELVSCSNCL YQSRRLLVRYGQTKKMNEK+++VHMLNATA
Sbjct: 108 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKVDYVHMLNATA 167
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILET+QTETG+++P+ L+K++P Y + EIPFVK+APIDEE+TKKQKKQ
Sbjct: 168 CATTRVICAILETYQTETGIKVPEILKKYLPTRYQD---EIPFVKSAPIDEEDTKKQKKQ 224
Query: 483 KEGMKKK 489
KEGMK K
Sbjct: 225 KEGMKNK 231
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 38/41 (92%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
DDKYLIATSEQPI A+HRD WLPEAS PIRYLGVSTCFRQE
Sbjct: 1 DDKYLIATSEQPIAALHRDQWLPEASFPIRYLGVSTCFRQE 41
>gi|328712780|ref|XP_001945803.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
pisum]
Length = 489
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/247 (77%), Positives = 211/247 (85%), Gaps = 18/247 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EKVGD LD+KYLIATSEQPI A+HRD WLPEAS PIRYLGVSTCFRQE
Sbjct: 249 VIGKGSEKVGDH-----NLDEKYLIATSEQPIAALHRDQWLPEASFPIRYLGVSTCFRQE 303
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEKVEQFVLTSP D++SW + DEMI NS +FY DLGIAYRVVNI
Sbjct: 304 VGSHGRDTRGIFRVHQFEKVEQFVLTSPFDNQSWILFDEMINNSRQFYDDLGIAYRVVNI 363
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------- 171
VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK+
Sbjct: 364 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKVDYVH 423
Query: 172 -IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ ATACATTRVICAILET+QTETG+++P+ L+K++P Y + EIPFVK+APIDEE+T
Sbjct: 424 MLNATACATTRVICAILETYQTETGIKVPEILKKYLPTRYQD---EIPFVKSAPIDEEDT 480
Query: 231 KKQKKQK 237
KKQK +K
Sbjct: 481 KKQKNKK 487
Score = 314 bits (805), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/181 (81%), Positives = 165/181 (91%), Gaps = 3/181 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSP D++SW DEMI NS +FY DLGIAYRVVNIVSGALN
Sbjct: 310 DTRGIFRVHQFEKVEQFVLTSPFDNQSWILFDEMINNSRQFYDDLGIAYRVVNIVSGALN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAAAKKLDLEAWFPGSGAFRELVSCSNCL YQSRRLLVRYGQTKKMNEK+++VHMLNATA
Sbjct: 370 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKVDYVHMLNATA 429
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILET+QTETG+++P+ L+K++P Y + EIPFVK+APIDEE+TKKQK +
Sbjct: 430 CATTRVICAILETYQTETGIKVPEILKKYLPTRYQD---EIPFVKSAPIDEEDTKKQKNK 486
Query: 483 K 483
K
Sbjct: 487 K 487
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 51/64 (79%), Gaps = 6/64 (9%)
Query: 514 LREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 572
L +VIGKG EKVGD LD+KYLIATSEQPI A+HRD WLPEAS PIRYLGVSTCF
Sbjct: 246 LYKVIGKGSEKVGDH-----NLDEKYLIATSEQPIAALHRDQWLPEASFPIRYLGVSTCF 300
Query: 573 RQEC 576
RQE
Sbjct: 301 RQEV 304
>gi|91086675|ref|XP_968460.1| PREDICTED: similar to seryl-tRNA synthetase [Tribolium castaneum]
Length = 499
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 178/251 (70%), Positives = 202/251 (80%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + E E+++KYLIATSEQPI A HRD W+ E++LPI+Y G+STCFRQEV
Sbjct: 251 VIGKGSE----KAEDKEIEEKYLIATSEQPIAAFHRDEWISESALPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSP D++SW+M+DEMI N+EEF L I YR+VNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPFDNKSWEMMDEMINNAEEFCKALQIPYRIVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKKLDLEAWFP SGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNNAAAKKLDLEAWFPASGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAATDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRVICAILE HQTETGV++P L+ F+P Y EIPFVK API+ E TK
Sbjct: 427 LNATMCATTRVICAILEVHQTETGVKVPPVLKDFLPEEYRE---EIPFVKPAPIEVEATK 483
Query: 232 KQKKQKEGMKK 242
K KKQKEGMKK
Sbjct: 484 KSKKQKEGMKK 494
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/186 (76%), Positives = 157/186 (84%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSP D++SW+ +DEMI N+EEF L I YR+VNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPFDNKSWEMMDEMINNAEEFCKALQIPYRIVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP SGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 372 NAAAKKLDLEAWFPASGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAATDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE HQTETGV++P L+ F+P Y EIPFVK API+ E TKK KKQ
Sbjct: 432 CATTRVICAILEVHQTETGVKVPPVLKDFLPEEYRE---EIPFVKPAPIEVEATKKSKKQ 488
Query: 483 KEGMKK 488
KEGMKK
Sbjct: 489 KEGMKK 494
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG + E E+++KYLIATSEQPI A HRD W+ E++LPI+Y G+STCFR
Sbjct: 248 LYKVIGKGSE----KAEDKEIEEKYLIATSEQPIAAFHRDEWISESALPIKYAGLSTCFR 303
Query: 574 QEC 576
QE
Sbjct: 304 QEV 306
Score = 41.6 bits (96), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 487 KKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDD 536
K +VLIDEAM++N+ +L+ TEKER+ AL+E+ G + DS D+ D+
Sbjct: 107 KVRVLIDEAMVKNDAELLRTEKERSAALKEI---GNLLHDSVVISDDEDN 153
>gi|270010395|gb|EFA06843.1| hypothetical protein TcasGA2_TC009786 [Tribolium castaneum]
Length = 529
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/251 (70%), Positives = 202/251 (80%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + E E+++KYLIATSEQPI A HRD W+ E++LPI+Y G+STCFRQEV
Sbjct: 251 VIGKGSE----KAEDKEIEEKYLIATSEQPIAAFHRDEWISESALPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSP D++SW+M+DEMI N+EEF L I YR+VNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPFDNKSWEMMDEMINNAEEFCKALQIPYRIVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKKLDLEAWFP SGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNNAAAKKLDLEAWFPASGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAATDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRVICAILE HQTETGV++P L+ F+P Y EIPFVK API+ E TK
Sbjct: 427 LNATMCATTRVICAILEVHQTETGVKVPPVLKDFLPEEYRE---EIPFVKPAPIEVEATK 483
Query: 232 KQKKQKEGMKK 242
K KKQKEGMKK
Sbjct: 484 KSKKQKEGMKK 494
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/186 (76%), Positives = 157/186 (84%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSP D++SW+ +DEMI N+EEF L I YR+VNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPFDNKSWEMMDEMINNAEEFCKALQIPYRIVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP SGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 372 NAAAKKLDLEAWFPASGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAATDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE HQTETGV++P L+ F+P Y EIPFVK API+ E TKK KKQ
Sbjct: 432 CATTRVICAILEVHQTETGVKVPPVLKDFLPEEYRE---EIPFVKPAPIEVEATKKSKKQ 488
Query: 483 KEGMKK 488
KEGMKK
Sbjct: 489 KEGMKK 494
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG + E E+++KYLIATSEQPI A HRD W+ E++LPI+Y G+STCFR
Sbjct: 248 LYKVIGKGSE----KAEDKEIEEKYLIATSEQPIAAFHRDEWISESALPIKYAGLSTCFR 303
Query: 574 QEC 576
QE
Sbjct: 304 QEV 306
Score = 41.6 bits (96), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 487 KKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDD 536
K +VLIDEAM++N+ +L+ TEKER+ AL+E+ G + DS D+ D+
Sbjct: 107 KVRVLIDEAMVKNDAELLRTEKERSAALKEI---GNLLHDSVVISDDEDN 153
>gi|195433819|ref|XP_002064904.1| GK14956 [Drosophila willistoni]
gi|194160989|gb|EDW75890.1| GK14956 [Drosophila willistoni]
Length = 502
Score = 355 bits (910), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 172/237 (72%), Positives = 196/237 (82%), Gaps = 16/237 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + + A D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSEKAEEAG----TDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNASVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA TRVICAILETHQTETG+++P+ L+KF+PA Y + EIPFVK APID E
Sbjct: 427 LNATLCAATRVICAILETHQTETGIKVPEPLKKFMPAKYQD---EIPFVKPAPIDLE 480
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/172 (77%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVRYGQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNASVDYVHMLNATL 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA TRVICAILETHQTETG+++P+ L+KF+PA Y + EIPFVK APID E
Sbjct: 432 CAATRVICAILETHQTETGIKVPEPLKKFMPAKYQD---EIPFVKPAPIDLE 480
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + + A D+KYLIATSEQPI A HRD WLPEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSEKAEEAG----TDEKYLIATSEQPIAAYHRDEWLPEASLPI 293
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 294 KYAGLSTCFRQEV 306
>gi|427797879|gb|JAA64391.1| Putative seryl-trna synthetase, partial [Rhipicephalus pulchellus]
Length = 566
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/252 (70%), Positives = 200/252 (79%), Gaps = 20/252 (7%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG GD A +D+KYLIATSEQPI A HRD WL +LPIRY G+S+CFRQEV
Sbjct: 250 VIGKG---GDGA-----VDEKYLIATSEQPIAAFHRDEWLSPEALPIRYAGISSCFRQEV 301
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF +TSPHD++SW+M DEMI N+EEF LGI YRVV+IV
Sbjct: 302 GSHGRDTRGIFRVHQFEKVEQFCITSPHDNKSWEMFDEMIGNAEEFCQKLGIPYRVVSIV 361
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKK DLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 362 SGALNNAAAKKHDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAQTEYVHM 421
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRVICAILE +QTE GV +P+ LR F+P Y IPFVK APIDE ETK
Sbjct: 422 LNATMCATTRVICAILENNQTEEGVIVPEALRPFMPPAYRE---MIPFVKPAPIDEAETK 478
Query: 232 KQKKQKEGMKKK 243
KQ+K +EGM+KK
Sbjct: 479 KQRKHREGMEKK 490
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/187 (75%), Positives = 158/187 (84%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD++SW+ DEMI N+EEF LGI YRVV+IVSGALN
Sbjct: 307 DTRGIFRVHQFEKVEQFCITSPHDNKSWEMFDEMIGNAEEFCQKLGIPYRVVSIVSGALN 366
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN + E+VHMLNAT
Sbjct: 367 NAAAKKHDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAQTEYVHMLNATM 426
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE +QTE GV +P+ LR F+P Y IPFVK APIDE ETKKQ+K
Sbjct: 427 CATTRVICAILENNQTEEGVIVPEALRPFMPPAYRE---MIPFVKPAPIDEAETKKQRKH 483
Query: 483 KEGMKKK 489
+EGM+KK
Sbjct: 484 REGMEKK 490
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 55/64 (85%)
Query: 388 SNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDC 447
SNCL YQ+RRLLVRYGQTKKMN + E+VHMLNAT CATTRVICAILE +QTE GV +P+
Sbjct: 503 SNCLDYQARRLLVRYGQTKKMNAQTEYVHMLNATMCATTRVICAILENNQTEEGVIVPEA 562
Query: 448 LRKF 451
LR F
Sbjct: 563 LRPF 566
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 9/64 (14%)
Query: 151 SNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILETHQTETGVRIPDC 201
SNCLDYQ+RRLLVRYGQTK+ + AT CATTRVICAILE +QTE GV +P+
Sbjct: 503 SNCLDYQARRLLVRYGQTKKMNAQTEYVHMLNATMCATTRVICAILENNQTEEGVIVPEA 562
Query: 202 LRKF 205
LR F
Sbjct: 563 LRPF 566
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 45/62 (72%), Gaps = 8/62 (12%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG GD A +D+KYLIATSEQPI A HRD WL +LPIRY G+S+CFR
Sbjct: 247 LYKVIGKG---GDGA-----VDEKYLIATSEQPIAAFHRDEWLSPEALPIRYAGISSCFR 298
Query: 574 QE 575
QE
Sbjct: 299 QE 300
>gi|156552806|ref|XP_001599572.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Nasonia
vitripennis]
Length = 494
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/251 (70%), Positives = 206/251 (82%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + GD + EL++KYLIATSEQPI A HR W+PEA+LPIRY G+STCFRQEV
Sbjct: 251 VIGKGSEKGD----EKELEEKYLIATSEQPIAAYHRGEWIPEATLPIRYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSPHD++SW+M++EMI+N+E+FY +L I YR+VNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMIRNAEDFYQELNIPYRIVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNASTDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CA TRVICA+LE +QTETG+++P + +F+P Y EIPFVK APIDE E K
Sbjct: 427 LNATMCAVTRVICAVLEINQTETGIKVPKAIAQFMPTQYQE---EIPFVKPAPIDEVEIK 483
Query: 232 KQKKQKEGMKK 242
KQKKQKE M K
Sbjct: 484 KQKKQKENMNK 494
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/186 (73%), Positives = 159/186 (85%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSPHD++SW+ ++EMI+N+E+FY +L I YR+VNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMIRNAEDFYQELNIPYRIVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNASTDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA TRVICA+LE +QTETG+++P + +F+P Y EIPFVK APIDE E KKQKKQ
Sbjct: 432 CAVTRVICAVLEINQTETGIKVPKAIAQFMPTQYQE---EIPFVKPAPIDEVEIKKQKKQ 488
Query: 483 KEGMKK 488
KE M K
Sbjct: 489 KENMNK 494
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG + GD + EL++KYLIATSEQPI A HR W+PEA+LPIRY G+STCFR
Sbjct: 248 LYKVIGKGSEKGD----EKELEEKYLIATSEQPIAAYHRGEWIPEATLPIRYAGLSTCFR 303
Query: 574 QEC 576
QE
Sbjct: 304 QEV 306
Score = 39.7 bits (91), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 489 KVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAP-EKDELDDK 537
+ LIDEA+ N++DL+ TE +RN+ALREV G + S P DE ++K
Sbjct: 109 RTLIDEAIAGNDQDLVKTEAQRNSALREV---GNHLHQSVPVSNDEEENK 155
>gi|195386010|ref|XP_002051697.1| GJ10873 [Drosophila virilis]
gi|194148154|gb|EDW63852.1| GJ10873 [Drosophila virilis]
Length = 501
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 172/238 (72%), Positives = 197/238 (82%), Gaps = 16/238 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E+ D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSERA----EESGTDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
+ AT CA TRVICAILETHQTETGV++P+ L+KF+P+ Y + EIPFVK APID E+
Sbjct: 427 LNATMCAATRVICAILETHQTETGVKVPEPLKKFMPSKYQD---EIPFVKPAPIDLEQ 481
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/173 (76%), Positives = 153/173 (88%), Gaps = 3/173 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVRYGQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
CA TRVICAILETHQTETGV++P+ L+KF+P+ Y +E IPFVK APID E+
Sbjct: 432 CAATRVICAILETHQTETGVKVPEPLKKFMPSKYQDE---IPFVKPAPIDLEQ 481
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + E+ D+KYLIATSEQPI A HRD WLPEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSERA----EESGTDEKYLIATSEQPIAAYHRDEWLPEASLPI 293
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 294 KYAGLSTCFRQEV 306
>gi|427789377|gb|JAA60140.1| Putative seryl-trna synthetase [Rhipicephalus pulchellus]
Length = 498
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/252 (70%), Positives = 200/252 (79%), Gaps = 20/252 (7%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG GD A +D+KYLIATSEQPI A HRD WL +LPIRY G+S+CFRQEV
Sbjct: 250 VIGKG---GDGA-----VDEKYLIATSEQPIAAFHRDEWLSPEALPIRYAGISSCFRQEV 301
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF +TSPHD++SW+M DEMI N+EEF LGI YRVV+IV
Sbjct: 302 GSHGRDTRGIFRVHQFEKVEQFCITSPHDNKSWEMFDEMIGNAEEFCQKLGIPYRVVSIV 361
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKK DLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 362 SGALNNAAAKKHDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAQTEYVHM 421
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRVICAILE +QTE GV +P+ LR F+P Y IPFVK APIDE ETK
Sbjct: 422 LNATMCATTRVICAILENNQTEEGVIVPEALRPFMPPAYRE---MIPFVKPAPIDEAETK 478
Query: 232 KQKKQKEGMKKK 243
KQ+K +EGM+KK
Sbjct: 479 KQRKHREGMEKK 490
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/187 (75%), Positives = 158/187 (84%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD++SW+ DEMI N+EEF LGI YRVV+IVSGALN
Sbjct: 307 DTRGIFRVHQFEKVEQFCITSPHDNKSWEMFDEMIGNAEEFCQKLGIPYRVVSIVSGALN 366
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN + E+VHMLNAT
Sbjct: 367 NAAAKKHDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAQTEYVHMLNATM 426
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE +QTE GV +P+ LR F+P Y IPFVK APIDE ETKKQ+K
Sbjct: 427 CATTRVICAILENNQTEEGVIVPEALRPFMPPAYRE---MIPFVKPAPIDEAETKKQRKH 483
Query: 483 KEGMKKK 489
+EGM+KK
Sbjct: 484 REGMEKK 490
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 8/65 (12%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG GD A +D+KYLIATSEQPI A HRD WL +LPIRY G+S+CFR
Sbjct: 247 LYKVIGKG---GDGA-----VDEKYLIATSEQPIAAFHRDEWLSPEALPIRYAGISSCFR 298
Query: 574 QECDA 578
QE +
Sbjct: 299 QEVGS 303
>gi|58389688|ref|XP_317207.2| AGAP008265-PA [Anopheles gambiae str. PEST]
gi|55237426|gb|EAA12316.2| AGAP008265-PA [Anopheles gambiae str. PEST]
Length = 503
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 172/238 (72%), Positives = 195/238 (81%), Gaps = 15/238 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + A + D+KYLIATSEQPI A HRD W+PEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKG---SERAEDGTATDEKYLIATSEQPIAAYHRDEWIPEASLPIKYAGLSTCFRQEV 307
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E F LGI YRVVNIV
Sbjct: 308 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEAFCQSLGIPYRVVNIV 367
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWF GSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 368 SGALNHAASKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHM 427
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
+ AT CATTRVICAILETHQTETGV++P+ L+K++P Y EIPFVK APID E+
Sbjct: 428 LNATMCATTRVICAILETHQTETGVKVPEVLQKYMPEKYRE---EIPFVKPAPIDVEQ 482
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/173 (77%), Positives = 151/173 (87%), Gaps = 3/173 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E F LGI YRVVNIVSGALN
Sbjct: 313 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEAFCQSLGIPYRVVNIVSGALN 372
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN +++VHMLNAT
Sbjct: 373 HAASKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHMLNATM 432
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
CATTRVICAILETHQTETGV++P+ L+K++P Y EIPFVK APID E+
Sbjct: 433 CATTRVICAILETHQTETGVKVPEVLQKYMPEKYRE---EIPFVKPAPIDVEQ 482
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + A + D+KYLIATSEQPI A HRD W+PEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKG---SERAEDGTATDEKYLIATSEQPIAAYHRDEWIPEASLPI 294
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 295 KYAGLSTCFRQEV 307
>gi|289743367|gb|ADD20431.1| seryl-tRNA synthetase [Glossina morsitans morsitans]
Length = 495
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/237 (72%), Positives = 195/237 (82%), Gaps = 20/237 (8%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + GD D+KYLIATSEQPI A HRD WL E++LPI+Y G+STCFRQEV
Sbjct: 251 VIGKGIEKGD--------DEKYLIATSEQPIAAYHRDEWLSESALPIKYAGLSTCFRQEV 302
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M++EMI N+E+F LGI YR+VNIV
Sbjct: 303 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMEEMIGNAEDFCKSLGIPYRIVNIV 362
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 363 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNASVDYVHM 422
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CATTRVICAILETHQTETGV +P+ LRK++P +Y EIPFVK API+ E
Sbjct: 423 LNATMCATTRVICAILETHQTETGVTVPEPLRKYMPEIYRE---EIPFVKPAPIELE 476
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/172 (77%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ ++EMI N+E+F LGI YR+VNIVSGALN
Sbjct: 308 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMEEMIGNAEDFCKSLGIPYRIVNIVSGALN 367
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAAAKKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN +++VHMLNAT
Sbjct: 368 HAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNASVDYVHMLNATM 427
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CATTRVICAILETHQTETGV +P+ LRK++P +Y EIPFVK API+ E
Sbjct: 428 CATTRVICAILETHQTETGVTVPEPLRKYMPEIYRE---EIPFVKPAPIELE 476
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 8/73 (10%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + GD D+KYLIATSEQPI A HRD WL E++LPI
Sbjct: 238 VAQLSQFDEELYKVIGKGIEKGD--------DEKYLIATSEQPIAAYHRDEWLSESALPI 289
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 290 KYAGLSTCFRQEV 302
Score = 41.6 bits (96), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 458 NEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKV--LIDEAMIQNEKDLIATEKERNNALR 515
+E+ E+P +P+ E +K + KKV LID+AM +NE L A E++RN ALR
Sbjct: 76 DESDEVPAELQSPLTELNVEKLSELSVNQIKKVRLLIDQAMSENESLLQANEQKRNLALR 135
Query: 516 EVIGKGEKVGDSAPEKDELDD 536
EV G + +S P ++ D+
Sbjct: 136 EV---GNHLHESVPVSNDEDE 153
>gi|195034327|ref|XP_001988872.1| GH10337 [Drosophila grimshawi]
gi|193904872|gb|EDW03739.1| GH10337 [Drosophila grimshawi]
Length = 504
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 168/237 (70%), Positives = 197/237 (83%), Gaps = 16/237 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + + A +D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSERAEEAG----IDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YR+VNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWQMMDEMIDNAEQFCQSLGIPYRIVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA TRVICAILETHQTETG+++P+ L++++PA + + EIPFVK APID E
Sbjct: 427 LNATMCAATRVICAILETHQTETGIKVPEPLKRYMPAKFQD---EIPFVKPAPIDLE 480
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YR+VNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWQMMDEMIDNAEQFCQSLGIPYRIVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVRYGQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA TRVICAILETHQTETG+++P+ L++++PA + + EIPFVK APID E
Sbjct: 432 CAATRVICAILETHQTETGIKVPEPLKRYMPAKFQD---EIPFVKPAPIDLE 480
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + + A +D+KYLIATSEQPI A HRD WLPEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSERAEEAG----IDEKYLIATSEQPIAAYHRDEWLPEASLPI 293
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 294 KYAGLSTCFRQEV 306
Score = 39.7 bits (91), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 487 KKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDD 536
K +VLIDEAM N+K L E+ RN ALREV G + +S P ++ D+
Sbjct: 107 KLRVLIDEAMTDNQKSLELAEQTRNTALREV---GNHLHESVPVSNDEDE 153
>gi|157108382|ref|XP_001650201.1| seryl-tRNA synthetase [Aedes aegypti]
gi|108879307|gb|EAT43532.1| AAEL005037-PA [Aedes aegypti]
Length = 500
Score = 352 bits (903), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 171/235 (72%), Positives = 195/235 (82%), Gaps = 16/235 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E+ D+KYLIATSEQPI A HRD W+PEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSE----KTEEGVSDEKYLIATSEQPIAAYHRDEWIPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWF GSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDFVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+ AT CATTRVICAILETHQTETGV++P+ L+K++P Y + EIPFVK APID
Sbjct: 427 LNATMCATTRVICAILETHQTETGVKVPEPLKKYMPEQYRD---EIPFVKPAPID 478
Score = 286 bits (731), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 134/170 (78%), Positives = 151/170 (88%), Gaps = 3/170 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++FVHMLNAT
Sbjct: 372 HAASKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDFVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CATTRVICAILETHQTETGV++P+ L+K++P Y + EIPFVK APID
Sbjct: 432 CATTRVICAILETHQTETGVKVPEPLKKYMPEQYRD---EIPFVKPAPID 478
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + E+ D+KYLIATSEQPI A HRD W+PEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSE----KTEEGVSDEKYLIATSEQPIAAYHRDEWIPEASLPI 293
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFRQE +
Sbjct: 294 KYAGLSTCFRQEVGS 308
>gi|194760604|ref|XP_001962529.1| GF15510 [Drosophila ananassae]
gi|190616226|gb|EDV31750.1| GF15510 [Drosophila ananassae]
Length = 501
Score = 352 bits (903), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 170/237 (71%), Positives = 197/237 (83%), Gaps = 16/237 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSE----KAEEVGVDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------- 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 427 LNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 480
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVRYGQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 432 CAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 480
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSE----KAEEVGVDEKYLIATSEQPIAAYHRDEWLPEASLPI 293
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 294 KYAGLSTCFRQEV 306
>gi|194855292|ref|XP_001968514.1| GG24463 [Drosophila erecta]
gi|190660381|gb|EDV57573.1| GG24463 [Drosophila erecta]
Length = 501
Score = 352 bits (902), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 170/237 (71%), Positives = 197/237 (83%), Gaps = 16/237 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------- 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 427 LNATMCAATRVICAILETHQTETGIKVPEPLKKYLPAKFQDE---IPFVKPAPIDLE 480
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVRYGQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 432 CAATRVICAILETHQTETGIKVPEPLKKYLPAKFQDE---IPFVKPAPIDLE 480
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPI 293
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 294 KYAGLSTCFRQEV 306
>gi|312385249|gb|EFR29798.1| hypothetical protein AND_01002 [Anopheles darlingi]
Length = 503
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/231 (72%), Positives = 192/231 (83%), Gaps = 12/231 (5%)
Query: 8 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDT 67
VG S+ E+ D+KYLIATSEQPI A HRD W+ E++LPI+Y G+STCFRQEVGSHGRDT
Sbjct: 252 VGKSSGEEGATDEKYLIATSEQPIAAYHRDEWIAESTLPIKYAGLSTCFRQEVGSHGRDT 311
Query: 68 RGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHA 127
RGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E F LGI YRVVNIVSGALNHA
Sbjct: 312 RGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEAFCQSLGIPYRVVNIVSGALNHA 371
Query: 128 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACA 178
AAKKLDLEAWF GSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+ + AT CA
Sbjct: 372 AAKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHMLNATMCA 431
Query: 179 TTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
TTRVICAILETHQTETG+++P+ L+K++P Y EIPFVK APID E+
Sbjct: 432 TTRVICAILETHQTETGIKVPEVLQKYMPEKYRE---EIPFVKPAPIDVEQ 479
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 134/173 (77%), Positives = 151/173 (87%), Gaps = 3/173 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E F LGI YRVVNIVSGALN
Sbjct: 310 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEAFCQSLGIPYRVVNIVSGALN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAAAKKLDLEAWF GSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN +++VHMLNAT
Sbjct: 370 HAAAKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHMLNATM 429
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
CATTRVICAILETHQTETG+++P+ L+K++P Y EIPFVK APID E+
Sbjct: 430 CATTRVICAILETHQTETGIKVPEVLQKYMPEKYRE---EIPFVKPAPIDVEQ 479
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 42/53 (79%)
Query: 524 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
VG S+ E+ D+KYLIATSEQPI A HRD W+ E++LPI+Y G+STCFRQE
Sbjct: 252 VGKSSGEEGATDEKYLIATSEQPIAAYHRDEWIAESTLPIKYAGLSTCFRQEV 304
>gi|125986127|ref|XP_001356827.1| GA14420 [Drosophila pseudoobscura pseudoobscura]
gi|195148460|ref|XP_002015192.1| GL19573 [Drosophila persimilis]
gi|54645153|gb|EAL33893.1| GA14420 [Drosophila pseudoobscura pseudoobscura]
gi|194107145|gb|EDW29188.1| GL19573 [Drosophila persimilis]
Length = 501
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/237 (71%), Positives = 196/237 (82%), Gaps = 16/237 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + + A D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSEKAEEAG----TDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA TRVICAILETHQTETG+++P+ L+K++PA + + EIPFVK APID E
Sbjct: 427 LNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQD---EIPFVKPAPIDLE 480
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/172 (75%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVR+GQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 432 CAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 480
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + + A D+KYLIATSEQPI A HRD WLPEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSEKAEEAG----TDEKYLIATSEQPIAAYHRDEWLPEASLPI 293
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 294 KYAGLSTCFRQEV 306
>gi|195342173|ref|XP_002037676.1| GM18172 [Drosophila sechellia]
gi|194132526|gb|EDW54094.1| GM18172 [Drosophila sechellia]
Length = 501
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/237 (71%), Positives = 197/237 (83%), Gaps = 16/237 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------- 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 427 LNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 480
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/172 (75%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVR+GQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 432 CAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 480
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPI 293
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 294 KYAGLSTCFRQEV 306
>gi|195470961|ref|XP_002087775.1| GE14950 [Drosophila yakuba]
gi|194173876|gb|EDW87487.1| GE14950 [Drosophila yakuba]
Length = 501
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/237 (71%), Positives = 197/237 (83%), Gaps = 16/237 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------- 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 427 LNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 480
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/172 (75%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVR+GQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 432 CAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 480
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + E+ +D+KYLIATSEQPI A HRD WLPEASLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPI 293
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 294 KYAGLSTCFRQEV 306
>gi|195114712|ref|XP_002001911.1| GI17096 [Drosophila mojavensis]
gi|193912486|gb|EDW11353.1| GI17096 [Drosophila mojavensis]
Length = 501
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 167/238 (70%), Positives = 197/238 (82%), Gaps = 16/238 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E+ D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSE----RAEESGTDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YR+VNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRIVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------- 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
+ AT CA TRVICAILETHQTETG+++P+ L+K++P+ + +E IP+VK APID E+
Sbjct: 427 LNATMCAATRVICAILETHQTETGIKVPEPLKKYMPSKFQDE---IPYVKPAPIDLEQ 481
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/173 (73%), Positives = 153/173 (88%), Gaps = 3/173 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YR+VNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRIVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVRYGQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNAAVDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
CA TRVICAILETHQTETG+++P+ L+K++P+ + +E IP+VK APID E+
Sbjct: 432 CAATRVICAILETHQTETGIKVPEPLKKYMPSKFQDE---IPYVKPAPIDLEQ 481
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +V+GKG + E+ D+KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFR
Sbjct: 248 LYKVVGKGSE----RAEESGTDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFR 303
Query: 574 QEC 576
QE
Sbjct: 304 QEV 306
>gi|24581334|ref|NP_608743.2| CG17259, isoform A [Drosophila melanogaster]
gi|442625652|ref|NP_001259982.1| CG17259, isoform B [Drosophila melanogaster]
gi|7295855|gb|AAF51155.1| CG17259, isoform A [Drosophila melanogaster]
gi|54650696|gb|AAV36927.1| LP20978p [Drosophila melanogaster]
gi|220952100|gb|ACL88593.1| CG17259-PA [synthetic construct]
gi|440213251|gb|AGB92519.1| CG17259, isoform B [Drosophila melanogaster]
Length = 501
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 168/237 (70%), Positives = 197/237 (83%), Gaps = 16/237 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E+ +D+KYLIATSEQPI A HRD WLPE+SLPI+Y G+STCFRQEV
Sbjct: 251 VVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------- 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTK+
Sbjct: 367 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 427 LNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 480
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/172 (75%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVR+GQTKKMN +++VHMLNAT
Sbjct: 372 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 432 CAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 480
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + E+ +D+KYLIATSEQPI A HRD WLPE+SLPI
Sbjct: 238 VAQLSQFDEELYKVVGKGSE----KAEEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPI 293
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 294 KYAGLSTCFRQEV 306
>gi|322792298|gb|EFZ16282.1| hypothetical protein SINV_03374 [Solenopsis invicta]
Length = 493
Score = 349 bits (895), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/251 (70%), Positives = 202/251 (80%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + E E+++KYLIATSEQPI A HR WL E +LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSERN----EDKEMEEKYLIATSEQPIAAFHRGEWLAENTLPIKYAGISTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSPHD++SW+M++EMI N+EEFY L I YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMISNAEEFYQALDIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 366 SGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNTTTDYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CA TRVICAILE HQTETG+++P L ++P+ Y N EIPFVK APIDE ETK
Sbjct: 426 LNATMCAVTRVICAILEVHQTETGIKVPKILADYMPSEYEN---EIPFVKVAPIDEIETK 482
Query: 232 KQKKQKEGMKK 242
KQKKQKE + K
Sbjct: 483 KQKKQKENVSK 493
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/186 (75%), Positives = 159/186 (85%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSPHD++SW+ ++EMI N+EEFY L I YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMISNAEEFYQALDIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNTTTDYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA TRVICAILE HQTETG+++P L ++P+ Y N EIPFVK APIDE ETKKQKKQ
Sbjct: 431 CAVTRVICAILEVHQTETGIKVPKILADYMPSEYEN---EIPFVKVAPIDEIETKKQKKQ 487
Query: 483 KEGMKK 488
KE + K
Sbjct: 488 KENVSK 493
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG + E E+++KYLIATSEQPI A HR WL E +LPI+Y G+STCFR
Sbjct: 247 LYKVIGKGSERN----EDKEMEEKYLIATSEQPIAAFHRGEWLAENTLPIKYAGISTCFR 302
Query: 574 QEC 576
QE
Sbjct: 303 QEV 305
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 489 KVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAP-EKDELDDK 537
+ LIDEA+ +N+++L ATE ERNNALREV G + +S P +DE ++K
Sbjct: 108 RTLIDEAIQKNDENLKATELERNNALREV---GNHLHESVPVSEDEEENK 154
>gi|357606091|gb|EHJ64911.1| hypothetical protein KGM_16833 [Danaus plexippus]
Length = 494
Score = 348 bits (893), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 172/238 (72%), Positives = 195/238 (81%), Gaps = 18/238 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG E GDSA +++KYLIATSEQPI A HRD WLPEASLPI+Y G+STCFRQE
Sbjct: 251 VIGKGSENKGDSA-----VEEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLSTCFRQE 305
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEKVEQFVLTSPHD+ SW M++EMI+N+E+FY LGI YRVVNI
Sbjct: 306 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWVMMEEMIKNAEDFYQSLGIPYRVVNI 365
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNCL+YQ+RRLLVRYGQTK+
Sbjct: 366 VSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVH 425
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CATTRVICAILE +QTE GV++P+ L+ ++P Y IPFVK APID E
Sbjct: 426 MLNATMCATTRVICAILEVNQTEEGVKVPEALKLWMPEQYQE---LIPFVKPAPIDLE 480
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 147/172 (85%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD+ SW ++EMI+N+E+FY LGI YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNASWVMMEEMIKNAEDFYQSLGIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN E+VHMLNAT
Sbjct: 372 HAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CATTRVICAILE +QTE GV++P+ L+ ++P Y IPFVK APID E
Sbjct: 432 CATTRVICAILEVNQTEEGVKVPEALKLWMPEQYQE---LIPFVKPAPIDLE 480
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG E GDSA +++KYLIATSEQPI A HRD WLPEASLP
Sbjct: 238 VAQLAQFDEELYKVIGKGSENKGDSA-----VEEKYLIATSEQPIAAYHRDEWLPEASLP 292
Query: 563 IRYLGVSTCFRQEC 576
I+Y G+STCFRQE
Sbjct: 293 IKYAGLSTCFRQEV 306
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 487 KKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELD 535
K +V+IDEA+++NE+ L+A EK R+ ALREV G + +S P D+ D
Sbjct: 107 KVRVMIDEAIMKNEQALVAAEKTRSAALREV---GNHLHESVPVDDDED 152
>gi|16648024|gb|AAL25277.1| GH04194p [Drosophila melanogaster]
Length = 272
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/237 (70%), Positives = 197/237 (83%), Gaps = 16/237 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E+ +D+KYLIATSEQPI A HRD WLPE+SLPI+Y G+STCFRQEV
Sbjct: 22 VVGKGSEKA----EEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYAGLSTCFRQEV 77
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+E+F LGI YRVVNIV
Sbjct: 78 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIV 137
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------- 171
SGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+RRLLVR+GQTK+
Sbjct: 138 SGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHM 197
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA TRVICAILETHQTETG+++P+ L+K++PA + +E IPFVK APID E
Sbjct: 198 LNATMCAATRVICAILETHQTETGIKVPEPLKKYMPAKFQDE---IPFVKPAPIDLE 251
Score = 279 bits (714), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 130/172 (75%), Positives = 152/172 (88%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+E+F LGI YRVVNIVSGALN
Sbjct: 83 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALN 142
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+RRLLVR+GQTKKMN +++VHMLNAT
Sbjct: 143 HAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHMLNATM 202
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA TRVICAILETHQTETG+++P+ L+K++PA + + EIPFVK APID E
Sbjct: 203 CAATRVICAILETHQTETGIKVPEPLKKYMPAKFQD---EIPFVKPAPIDLE 251
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + E+ +D+KYLIATSEQPI A HRD WLPE+SLPI
Sbjct: 9 VAQLSQFDEELYKVVGKGSEKA----EEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPI 64
Query: 564 RYLGVSTCFRQE 575
+Y G+STCFRQE
Sbjct: 65 KYAGLSTCFRQE 76
>gi|328670885|gb|AEB26319.1| seryl-tRNA synthetase [Helicoverpa armigera]
Length = 491
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/238 (71%), Positives = 194/238 (81%), Gaps = 18/238 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V+GKG E GD A +++KYLIATSEQPI A HRD WLPEASLPIRY G+STCFRQE
Sbjct: 251 VVGKGSENKGDVA-----IEEKYLIATSEQPIAAYHRDEWLPEASLPIRYAGLSTCFRQE 305
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEKVEQFVLTSPHD+ SW+M+DEMI N+EEFY L I YRVVNI
Sbjct: 306 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMITNAEEFYQLLDIPYRVVNI 365
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL+YQ+RRLLVRYGQTK+
Sbjct: 366 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVH 425
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CATTRVICA+LE +QTE G+++P+ L++++P Y IPFVK APID E
Sbjct: 426 MLNATMCATTRVICAVLEVNQTEEGIKVPEALKQWMPEQYQE---LIPFVKPAPIDVE 480
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 147/172 (85%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD+ SW+ +DEMI N+EEFY L I YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMITNAEEFYQLLDIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAAAKKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN E+VHMLNAT
Sbjct: 372 HAAAKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CATTRVICA+LE +QTE G+++P+ L++++P Y IPFVK APID E
Sbjct: 432 CATTRVICAVLEVNQTEEGIKVPEALKQWMPEQYQE---LIPFVKPAPIDVE 480
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 49/64 (76%), Gaps = 6/64 (9%)
Query: 514 LREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 572
L +V+GKG E GD A +++KYLIATSEQPI A HRD WLPEASLPIRY G+STCF
Sbjct: 248 LYKVVGKGSENKGDVA-----IEEKYLIATSEQPIAAYHRDEWLPEASLPIRYAGLSTCF 302
Query: 573 RQEC 576
RQE
Sbjct: 303 RQEV 306
Score = 43.1 bits (100), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 487 KKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELD 535
K +VLIDEA+ +NE+ LIA EK R+ ALREV G + +S P D+ D
Sbjct: 107 KVRVLIDEAIAKNEQGLIAAEKARSAALREV---GNHLHESVPVDDDED 152
>gi|332025907|gb|EGI66063.1| Seryl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
Length = 493
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/251 (69%), Positives = 202/251 (80%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + E E+++KYLIATSEQPI A HR W+ E +LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSERN----EDKEMEEKYLIATSEQPIAAFHRGEWIAENALPIKYAGISTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQF LTSPHD++SW+M++EMI N+E+FY L I YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFCLTSPHDNKSWEMMEEMISNAEKFYQALDIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 366 SGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNTTTDYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CA TRVICAILE HQTETG+++P L ++P+ Y N EIPFVK APIDE ETK
Sbjct: 426 LNATMCAVTRVICAILEVHQTETGIKVPKILADYMPSEYEN---EIPFVKAAPIDEIETK 482
Query: 232 KQKKQKEGMKK 242
KQKKQKE + K
Sbjct: 483 KQKKQKENVSK 493
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 139/186 (74%), Positives = 159/186 (85%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQF LTSPHD++SW+ ++EMI N+E+FY L I YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFCLTSPHDNKSWEMMEEMISNAEKFYQALDIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNTTTDYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA TRVICAILE HQTETG+++P L ++P+ Y N EIPFVK APIDE ETKKQKKQ
Sbjct: 431 CAVTRVICAILEVHQTETGIKVPKILADYMPSEYEN---EIPFVKAAPIDEIETKKQKKQ 487
Query: 483 KEGMKK 488
KE + K
Sbjct: 488 KENVSK 493
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG + E E+++KYLIATSEQPI A HR W+ E +LPI+Y G+STCFR
Sbjct: 247 LYKVIGKGSERN----EDKEMEEKYLIATSEQPIAAFHRGEWIAENALPIKYAGISTCFR 302
Query: 574 QEC 576
QE
Sbjct: 303 QEV 305
>gi|56090265|ref|NP_001007607.1| serine--tRNA ligase, cytoplasmic [Rattus norvegicus]
gi|81885333|sp|Q6P799.3|SYSC_RAT RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|38197710|gb|AAH61765.1| Seryl-tRNA synthetase [Rattus norvegicus]
gi|149025696|gb|EDL81939.1| seryl-aminoacyl-tRNA synthetase 1, isoform CRA_b [Rattus
norvegicus]
Length = 512
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 173/253 (68%), Positives = 198/253 (78%), Gaps = 18/253 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y G STCFRQE
Sbjct: 250 VIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 VSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +
Sbjct: 425 MLNATMCATTRTICAILENYQTEKGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPS 481
Query: 231 KKQKKQKEGMKKK 243
KKQKKQ EG KKK
Sbjct: 482 KKQKKQHEGSKKK 494
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 137/198 (69%), Positives = 162/198 (81%), Gaps = 5/198 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQNE 500
EG KKK E ++N+
Sbjct: 488 HEGSKKKA--KEVTLENQ 503
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y G STCFRQE
Sbjct: 292 IKYAGFSTCFRQEV 305
>gi|345308976|ref|XP_001510792.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Ornithorhynchus
anatinus]
Length = 493
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/252 (67%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 229 VIGKGSEKADD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 284
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 285 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIGTAEEFYQALGIPYHIVNIV 344
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 345 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 404
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 405 LNATMCATTRTICAILENYQTEKGIIVPEKLRQFMPP-DLQEL--IPFVKAAPIDQEPSK 461
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 462 KQKKQHEGGKKK 473
Score = 285 bits (730), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 134/197 (68%), Positives = 160/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 290 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIGTAEEFYQALGIPYHIVNIVSGSLN 349
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 350 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 409
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR+F+P + IPFVK APID+E +KKQKKQ
Sbjct: 410 CATTRTICAILENYQTEKGIIVPEKLRQFMPP---DLQELIPFVKAAPIDQEPSKKQKKQ 466
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK ++ ++
Sbjct: 467 HEGGKKKAAAGDSALEG 483
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 216 VAQLSQFDEELYKVIGKGSEKADD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 271
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFRQE +
Sbjct: 272 KYAGLSTCFRQEVGS 286
>gi|395535505|ref|XP_003769766.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Sarcophilus harrisii]
Length = 514
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 170/254 (66%), Positives = 197/254 (77%), Gaps = 16/254 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMISTAEEFYQALGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTENGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQELSK 482
Query: 232 KQKKQKEGMKKKLT 245
KQKKQ EG KKK+T
Sbjct: 483 KQKKQHEGGKKKMT 496
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 161/196 (82%), Gaps = 3/196 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMISTAEEFYQALGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTENGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQELSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQ 498
EG KKK+ +A ++
Sbjct: 488 HEGGKKKMTAGDAALE 503
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G STCFRQE
Sbjct: 293 KYAGFSTCFRQEV 305
>gi|148670021|gb|EDL01968.1| seryl-aminoacyl-tRNA synthetase, isoform CRA_a [Mus musculus]
Length = 515
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/252 (67%), Positives = 196/252 (77%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 253 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 308
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 309 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIV 368
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 369 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 428
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +Q E G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 429 LNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 485
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 486 KQKKQHEGSKKK 497
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 156/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 314 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLN 373
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 374 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 433
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 434 CATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 490
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 491 HEGSKKK 497
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 240 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 295
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 296 KYAGLSTCFRQEV 308
>gi|326381098|ref|NP_001191908.1| serine--tRNA ligase, cytoplasmic isoform 2 [Mus musculus]
gi|18266844|sp|P26638.3|SYSC_MOUSE RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|14250361|gb|AAH08612.1| Sars protein [Mus musculus]
gi|26344682|dbj|BAC35990.1| unnamed protein product [Mus musculus]
Length = 512
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/252 (67%), Positives = 196/252 (77%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +Q E G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 156/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|344275584|ref|XP_003409592.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Loxodonta
africana]
Length = 514
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/254 (66%), Positives = 197/254 (77%), Gaps = 16/254 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y GVSTCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGVSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIGTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQT++
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTRKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKKLT 245
KQKKQ EG K K+
Sbjct: 483 KQKKQHEGSKNKMA 496
Score = 285 bits (730), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 134/198 (67%), Positives = 162/198 (81%), Gaps = 3/198 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIGTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQT+KM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTRKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQNE 500
EG K K+ E ++N+
Sbjct: 488 HEGSKNKMAAGEVALENQ 505
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y GVSTCFRQE
Sbjct: 293 KYAGVSTCFRQEV 305
>gi|74139849|dbj|BAE31768.1| unnamed protein product [Mus musculus]
Length = 512
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/252 (67%), Positives = 196/252 (77%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +Q E G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 156/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|348586982|ref|XP_003479247.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like isoform 1 [Cavia
porcellus]
Length = 514
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/252 (67%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/197 (68%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAATRDVTLEN 504
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|354506522|ref|XP_003515309.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic isoform 1 [Cricetulus
griseus]
gi|344259031|gb|EGW15135.1| Seryl-tRNA synthetase, cytoplasmic [Cricetulus griseus]
Length = 512
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/253 (67%), Positives = 199/253 (78%), Gaps = 18/253 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 250 VIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 VSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +
Sbjct: 425 MLNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPS 481
Query: 231 KKQKKQKEGMKKK 243
KKQKKQ EG KKK
Sbjct: 482 KKQKKQHEGSKKK 494
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/199 (68%), Positives = 163/199 (81%), Gaps = 5/199 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKV--LIDEAMIQN 499
EG KKK + E+ +QN
Sbjct: 488 HEGSKKKAKEVTLESQLQN 506
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y G+STCFRQE
Sbjct: 292 IKYAGLSTCFRQEV 305
>gi|350583566|ref|XP_001925705.3| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Sus scrofa]
Length = 514
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/252 (67%), Positives = 198/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SWKML EMI+ +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWKMLREMIETAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/187 (72%), Positives = 158/187 (84%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SWK L EMI+ +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWKMLREMIETAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|395821597|ref|XP_003784124.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Otolemur garnettii]
Length = 514
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/254 (66%), Positives = 198/254 (77%), Gaps = 16/254 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKKLT 245
KQKKQ EG KKK+
Sbjct: 483 KQKKQHEGSKKKMA 496
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/197 (68%), Positives = 162/197 (82%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK+ + ++N
Sbjct: 488 HEGSKKKMATKDVALEN 504
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|296208728|ref|XP_002751220.1| PREDICTED: serine--tRNA ligase, cytoplasmic isoform 1 [Callithrix
jacchus]
Length = 512
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/252 (67%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|444724738|gb|ELW65336.1| Seryl-tRNA synthetase, cytoplasmic [Tupaia chinensis]
Length = 514
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/253 (66%), Positives = 199/253 (78%), Gaps = 16/253 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P+ L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEEGIIVPEKLKEFMPS-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKKL 244
KQKKQ EG KKK+
Sbjct: 483 KQKKQHEGSKKKV 495
Score = 286 bits (732), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/197 (68%), Positives = 163/197 (82%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P+ + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEEGIIVPEKLKEFMPS-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKKV + ++N
Sbjct: 488 HEGSKKKVAAKDVTLEN 504
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|389614616|dbj|BAM20344.1| seryl-tRNA synthetase [Papilio polytes]
Length = 429
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/238 (71%), Positives = 193/238 (81%), Gaps = 18/238 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V+GKG E GD+ +++KYLIATSEQPI A HRD WL E+SLPIRY G+STCFRQE
Sbjct: 184 VVGKGSENKGDNI-----IEEKYLIATSEQPIAAYHRDEWLAESSLPIRYAGLSTCFRQE 238
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDD SWKM+DEMI N+E+FY LGI YR+VNI
Sbjct: 239 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDASWKMMDEMIGNAEDFYQTLGIPYRIVNI 298
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL+YQ+RRLLVRYGQTK+
Sbjct: 299 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVH 358
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CATTRVICA+LE +QTE G+++P+ L+ ++P Y IPFVK APID E
Sbjct: 359 MLNATMCATTRVICAVLECNQTEEGIKVPEILKPWMPEQYQE---LIPFVKPAPIDLE 413
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/172 (76%), Positives = 147/172 (85%), Gaps = 3/172 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHDD SWK +DEMI N+E+FY LGI YR+VNIVSGALN
Sbjct: 245 DTRGIFRVHQFEKVEQFVLTSPHDDASWKMMDEMIGNAEDFYQTLGIPYRIVNIVSGALN 304
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAAAKKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN E+VHMLNAT
Sbjct: 305 HAAAKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATM 364
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CATTRVICA+LE +QTE G+++P+ L+ ++P Y IPFVK APID E
Sbjct: 365 CATTRVICAVLECNQTEEGIKVPEILKPWMPEQYQEL---IPFVKPAPIDLE 413
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 6/76 (7%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +V+GKG E GD+ +++KYLIATSEQPI A HRD WL E+SLP
Sbjct: 171 VAQLAQFDEELYKVVGKGSENKGDNI-----IEEKYLIATSEQPIAAYHRDEWLAESSLP 225
Query: 563 IRYLGVSTCFRQECDA 578
IRY G+STCFRQE +
Sbjct: 226 IRYAGLSTCFRQEVGS 241
Score = 41.2 bits (95), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 487 KKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELD 535
K +VLIDEA+ +NE+ LI EK R+ ALREV G + S P D+ D
Sbjct: 40 KVRVLIDEAITKNEQGLITAEKARSAALREV---GNHLHPSVPVDDDED 85
>gi|241061140|ref|XP_002408067.1| seryl-tRNA synthetase, putative [Ixodes scapularis]
gi|215492361|gb|EEC02002.1| seryl-tRNA synthetase, putative [Ixodes scapularis]
Length = 446
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/233 (71%), Positives = 189/233 (81%), Gaps = 12/233 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
+KYLIATSEQPI A HRD WL +LP+RY G+S+CFRQEVGSHGRDTRGIFRVHQFEKV
Sbjct: 209 EKYLIATSEQPIAAFHRDEWLSPEALPLRYAGLSSCFRQEVGSHGRDTRGIFRVHQFEKV 268
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +TSPHD++SW+M DEMI N+EEF LGI YRVV+IVSGALN+AAAKK DLEAWFP
Sbjct: 269 EQFCITSPHDNKSWEMFDEMIGNAEEFCQKLGIPYRVVSIVSGALNNAAAKKHDLEAWFP 328
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATTRVICAILETH 190
SGAFRELVSCSNCLDYQSRRLL+RYGQTK+ + AT CA TRVICAILE H
Sbjct: 329 ASGAFRELVSCSNCLDYQSRRLLIRYGQTKKMNAQTEYVHMLNATMCAVTRVICAILENH 388
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
QTETGV +P+ LR F+P + IPFVK AP+DE ETKKQ+K +EGM+KK
Sbjct: 389 QTETGVVVPEALRPFMPPAFRE---LIPFVKPAPVDEAETKKQRKHREGMEKK 438
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/187 (74%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD++SW+ DEMI N+EEF LGI YRVV+IVSGALN
Sbjct: 255 DTRGIFRVHQFEKVEQFCITSPHDNKSWEMFDEMIGNAEEFCQKLGIPYRVVSIVSGALN 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP SGAFRELVSCSNCL YQSRRLL+RYGQTKKMN + E+VHMLNAT
Sbjct: 315 NAAAKKHDLEAWFPASGAFRELVSCSNCLDYQSRRLLIRYGQTKKMNAQTEYVHMLNATM 374
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA TRVICAILE HQTETGV +P+ LR F+P + IPFVK AP+DE ETKKQ+K
Sbjct: 375 CAVTRVICAILENHQTETGVVVPEALRPFMPPAFRE---LIPFVKPAPVDEAETKKQRKH 431
Query: 483 KEGMKKK 489
+EGM+KK
Sbjct: 432 REGMEKK 438
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
+KYLIATSEQPI A HRD WL +LP+RY G+S+CFRQE
Sbjct: 209 EKYLIATSEQPIAAFHRDEWLSPEALPLRYAGLSSCFRQE 248
>gi|380815438|gb|AFE79593.1| seryl-tRNA synthetase, cytoplasmic [Macaca mulatta]
gi|383420617|gb|AFH33522.1| seryl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 514
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|75075821|sp|Q4R4U9.3|SYSC_MACFA RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|67971068|dbj|BAE01876.1| unnamed protein product [Macaca fascicularis]
Length = 514
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (721), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|403284158|ref|XP_003933447.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Saimiri boliviensis
boliviensis]
Length = 512
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKADD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKADD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|355717852|gb|AES06074.1| seryl-tRNA synthetase [Mustela putorius furo]
Length = 444
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 180 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 235
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +E+FY LGI Y +VNIV
Sbjct: 236 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMISTAEDFYQSLGIPYHIVNIV 295
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 296 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 355
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 356 LNATMCATTRTICAILENYQTEEGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 412
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 413 KQKKQHEGSKKK 424
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/197 (68%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +E+FY LGI Y +VNIVSG+LN
Sbjct: 241 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMISTAEDFYQSLGIPYHIVNIVSGSLN 300
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 301 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 360
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 361 CATTRTICAILENYQTEEGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 417
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 418 HEGSKKKGAAKDVPLEN 434
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 167 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 222
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFRQE +
Sbjct: 223 KYAGLSTCFRQEVGS 237
>gi|383854318|ref|XP_003702668.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Megachile
rotundata]
Length = 534
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/238 (69%), Positives = 192/238 (80%), Gaps = 16/238 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D E+++KYLIATSEQPI A HR+ W+PE +LPI+Y G+STCFRQEV
Sbjct: 291 VIGKGSEHNDDK----EIEEKYLIATSEQPIAAFHRNEWIPENTLPIKYAGLSTCFRQEV 346
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSP D++SW+M++EMI N+EEFY L I YR+VNIV
Sbjct: 347 GSHGRDTRGIFRVHQFEKVEQFCLTSPFDNKSWQMMEEMISNAEEFYKTLEIPYRIVNIV 406
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AA+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 407 SGALNNAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNASTDYVHM 466
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
+ AT CA TRVICAILE HQT+TG++IP+ L +F+P Y EIPFVK APIDE E
Sbjct: 467 LNATMCAVTRVICAILEVHQTDTGIKIPNILAEFMPVEY---RTEIPFVKPAPIDETE 521
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/173 (74%), Positives = 147/173 (84%), Gaps = 3/173 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSP D++SW+ ++EMI N+EEFY L I YR+VNIVSGALN
Sbjct: 352 DTRGIFRVHQFEKVEQFCLTSPFDNKSWQMMEEMISNAEEFYKTLEIPYRIVNIVSGALN 411
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 412 NAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNASTDYVHMLNATM 471
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
CA TRVICAILE HQT+TG++IP+ L +F+P Y EIPFVK APIDE E
Sbjct: 472 CAVTRVICAILEVHQTDTGIKIPNILAEFMPVEY---RTEIPFVKPAPIDETE 521
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D E+++KYLIATSEQPI A HR+ W+PE +LPI
Sbjct: 278 VAQLSQFDEELYKVIGKGSEHNDDK----EIEEKYLIATSEQPIAAFHRNEWIPENTLPI 333
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 334 KYAGLSTCFRQEV 346
>gi|431896447|gb|ELK05859.1| Seryl-tRNA synthetase, cytoplasmic [Pteropus alecto]
Length = 514
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICA+LE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICALLENYQTEEGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 133/198 (67%), Positives = 163/198 (82%), Gaps = 3/198 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICA+LE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICALLENYQTEEGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQNE 500
EG KKK + + ++++
Sbjct: 488 HEGSKKKGAVRDGTLESQ 505
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|291398355|ref|XP_002715855.1| PREDICTED: seryl-tRNA synthetase isoform 2 [Oryctolagus cuniculus]
Length = 514
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/197 (68%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAAARDVTLEN 504
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|149708708|ref|XP_001494147.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like isoform 1 [Equus
caballus]
Length = 513
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 249 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 304
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 305 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 364
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 424
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 425 LNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 481
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 482 KQKKQHEGSKKK 493
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 310 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 370 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 429
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 430 CATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 486
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 487 HEGSKKK 493
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 236 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 291
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 292 KYAGLSTCFRQEV 304
>gi|307180360|gb|EFN68386.1| Seryl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
Length = 493
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/251 (69%), Positives = 201/251 (80%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + E E+++KYLIATSEQPI A HR W+ E LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSERN----EDKEMEEKYLIATSEQPIAAFHRGEWIAENVLPIKYAGISTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSP++++SW+M++EMI N+EEFY L I YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKVEQFCLTSPYNNKSWEMMEEMISNAEEFYQALEIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 366 SGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNATTDYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CA TRVICAILE HQTETG+R+P L +++P+ Y EIPFVK APIDE ETK
Sbjct: 426 LNATMCAVTRVICAILEVHQTETGIRVPKILAEYMPSKY---ESEIPFVKPAPIDEIETK 482
Query: 232 KQKKQKEGMKK 242
KQKKQKE + K
Sbjct: 483 KQKKQKENVSK 493
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/186 (74%), Positives = 159/186 (85%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSP++++SW+ ++EMI N+EEFY L I YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKVEQFCLTSPYNNKSWEMMEEMISNAEEFYQALEIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNATTDYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA TRVICAILE HQTETG+R+P L +++P+ Y EIPFVK APIDE ETKKQKKQ
Sbjct: 431 CAVTRVICAILEVHQTETGIRVPKILAEYMPSKY---ESEIPFVKPAPIDEIETKKQKKQ 487
Query: 483 KEGMKK 488
KE + K
Sbjct: 488 KENVSK 493
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG + E E+++KYLIATSEQPI A HR W+ E LPI+Y G+STCFR
Sbjct: 247 LYKVIGKGSERN----EDKEMEEKYLIATSEQPIAAFHRGEWIAENVLPIKYAGISTCFR 302
Query: 574 QEC 576
QE
Sbjct: 303 QEV 305
>gi|426216134|ref|XP_004002322.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Ovis aries]
Length = 514
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSERSDD----NSFEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGILVPEKLKEFMPP-GLQEL--IPFVKAAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGILVPEKLKEFMPP-GLQEL--IPFVKAAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSERSDD----NSFEEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|119576774|gb|EAW56370.1| seryl-tRNA synthetase, isoform CRA_f [Homo sapiens]
Length = 421
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 157 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 212
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 213 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 272
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 273 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 332
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 333 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 389
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 390 KQKKQHEGSKKK 401
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 218 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 277
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 278 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 337
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 338 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 394
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 395 HEGSKKKAAARDVTLEN 411
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 11/101 (10%)
Query: 487 KKKVLIDEAMIQNEKDLIATEKERNNALREV---------IGKGEKVGDSAPEKDE--LD 535
K ++LIDEA+++ + + I E ER LRE+ I E +G + + D+ D
Sbjct: 112 KVRLLIDEAILKCDAERIKLEAERFENLREIGNLLHPSVPISNDEVIGKGSEKSDDNSYD 171
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 172 EKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 212
>gi|335775018|gb|AEH58431.1| seryl-tRNA synthetase, cytoplasmic-like protein, partial [Equus
caballus]
Length = 410
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 146 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 201
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 202 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 261
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 262 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 321
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 322 LNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPPG-LQEL--IPFVKPAPIDQEPSK 378
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 379 KQKKQHEGSKKK 390
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 207 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 266
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 267 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 326
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 327 CATTRTICAILENYQTEKGIIVPEKLKEFMPPG-LQEL--IPFVKPAPIDQEPSKKQKKQ 383
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 384 HEGSKKK 390
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 133 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 188
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFRQE +
Sbjct: 189 KYAGLSTCFRQEVGS 203
>gi|119576769|gb|EAW56365.1| seryl-tRNA synthetase, isoform CRA_a [Homo sapiens]
Length = 466
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 202 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 257
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 258 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 317
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 318 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 377
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 378 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 434
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 435 KQKKQHEGSKKK 446
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 263 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 322
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 323 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 382
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 383 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 439
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 440 HEGSKKKAAARDVTLEN 456
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 189 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 244
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 245 KYAGLSTCFRQEV 257
>gi|119576771|gb|EAW56367.1| seryl-tRNA synthetase, isoform CRA_c [Homo sapiens]
Length = 447
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 183 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 238
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 239 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 298
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 299 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 358
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 359 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 415
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 416 KQKKQHEGSKKK 427
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 244 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 303
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 304 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 363
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 364 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 420
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 421 HEGSKKKAAARDVTLEN 437
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 170 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 225
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 226 KYAGLSTCFRQEV 238
>gi|387018622|gb|AFJ51429.1| Seryl-tRNA synthetase, cytoplasmic-like [Crotalus adamanteus]
Length = 514
Score = 342 bits (876), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 199/262 (75%), Gaps = 16/262 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + D + +D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VLGKGSEKSDD----NTVDEKYLIATSEQPIAALHRDEWLKPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMISVAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ IPD L+ F+P + L E I FVK APID+E +K
Sbjct: 426 LNATMCATTRAICAILENYQTEEGIIIPDKLKDFMP-LGLKEM--IKFVKPAPIDQELSK 482
Query: 232 KQKKQKEGMKKKLTMSLFSQVG 253
KQKKQ EG KKK F+ G
Sbjct: 483 KQKKQHEGGKKKSAGGDFALEG 504
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/187 (72%), Positives = 155/187 (82%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMISVAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ IPD L+ F+P + + E I FVK APID+E +KKQKKQ
Sbjct: 431 CATTRAICAILENYQTEEGIIIPDKLKDFMP-LGLKEM--IKFVKPAPIDQELSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGGKKK 494
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + D + +D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVLGKGSEKSDD----NTVDEKYLIATSEQPIAALHRDEWLKPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|119576775|gb|EAW56371.1| seryl-tRNA synthetase, isoform CRA_g [Homo sapiens]
Length = 521
Score = 342 bits (876), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 257 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 312
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 313 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 372
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 373 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 432
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 433 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 489
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 490 KQKKQHEGSKKK 501
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 318 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 377
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 378 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 437
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 438 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 494
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 495 HEGSKKKAAARDVTLEN 511
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 244 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 299
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 300 KYAGLSTCFRQEV 312
>gi|378792521|pdb|3VBB|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792522|pdb|3VBB|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792523|pdb|3VBB|C Chain C, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792524|pdb|3VBB|D Chain D, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792525|pdb|3VBB|E Chain E, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
gi|378792526|pdb|3VBB|F Chain F, Crystal Structure Of Seryl-Trna Synthetase From Human At
2.9 Angstroms
Length = 522
Score = 342 bits (876), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAAARDVTLEN 504
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|126310917|ref|XP_001372417.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Monodelphis
domestica]
Length = 513
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 171/254 (67%), Positives = 198/254 (77%), Gaps = 18/254 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y G STCFRQE
Sbjct: 250 VIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV SPHD++SW+M +EMI +EEFY LGI Y +VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFEEMISTAEEFYQALGIPYHIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 VSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +
Sbjct: 425 MLNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPS 481
Query: 231 KKQKKQKEGMKKKL 244
KKQKKQ EG KKK+
Sbjct: 482 KKQKKQHEGGKKKI 495
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/194 (69%), Positives = 160/194 (82%), Gaps = 3/194 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDNKSWEMFEEMISTAEEFYQALGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAM 496
EG KKK+ D A+
Sbjct: 488 HEGGKKKIPADVAL 501
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y G STCFRQE
Sbjct: 292 IKYAGFSTCFRQEV 305
>gi|1050527|emb|CAA62635.1| seryl-tRNA synthetase [Homo sapiens]
Length = 514
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAAARDVTLEN 504
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|27806419|ref|NP_776600.1| serine--tRNA ligase, cytoplasmic [Bos taurus]
gi|18202925|sp|Q9GMB8.3|SYSC_BOVIN RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|9945026|gb|AAG03084.1|AF297553_1 seryl-tRNA synthetase [Bos taurus]
gi|296489322|tpg|DAA31435.1| TPA: seryl-tRNA synthetase [Bos taurus]
Length = 514
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGILVPEKLKEFMPP-GLQEL--IPFVKAAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGILVPEKLKEFMPP-GLQEL--IPFVKAAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|16306548|ref|NP_006504.2| serine--tRNA ligase, cytoplasmic [Homo sapiens]
gi|19860217|sp|P49591.3|SYSC_HUMAN RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|7768886|dbj|BAA95602.1| Seryl tRNA Synthetase [Homo sapiens]
gi|12653851|gb|AAH00716.1| Seryl-tRNA synthetase [Homo sapiens]
gi|119576773|gb|EAW56369.1| seryl-tRNA synthetase, isoform CRA_e [Homo sapiens]
gi|123982658|gb|ABM83070.1| seryl-tRNA synthetase [synthetic construct]
gi|123997327|gb|ABM86265.1| seryl-tRNA synthetase [synthetic construct]
gi|189053470|dbj|BAG35636.1| unnamed protein product [Homo sapiens]
gi|261859898|dbj|BAI46471.1| seryl-tRNA synthetase [synthetic construct]
Length = 514
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAAARDVTLEN 504
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|114558179|ref|XP_001148840.1| PREDICTED: serine--tRNA ligase, cytoplasmic isoform 9 [Pan
troglodytes]
gi|397473799|ref|XP_003808387.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Pan paniscus]
gi|410222666|gb|JAA08552.1| seryl-tRNA synthetase [Pan troglodytes]
gi|410252964|gb|JAA14449.1| seryl-tRNA synthetase [Pan troglodytes]
gi|410305834|gb|JAA31517.1| seryl-tRNA synthetase [Pan troglodytes]
gi|410356234|gb|JAA44524.1| seryl-tRNA synthetase [Pan troglodytes]
Length = 514
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (721), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAAARDITLEN 504
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|197097784|ref|NP_001125910.1| serine--tRNA ligase, cytoplasmic [Pongo abelii]
gi|75070681|sp|Q5R9K9.3|SYSC_PONAB RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|55729644|emb|CAH91551.1| hypothetical protein [Pongo abelii]
Length = 514
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/197 (68%), Positives = 162/197 (82%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK +A ++N
Sbjct: 488 HEGSKKKAAARDATLEN 504
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|332237491|ref|XP_003267937.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Nomascus leucogenys]
Length = 514
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAAARDVTLEN 504
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|417402105|gb|JAA47908.1| Putative seryl-trna synthetase [Desmodus rotundus]
Length = 512
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/251 (66%), Positives = 197/251 (78%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NTYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +E+FY LG+ Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGVPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTETG+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTETGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKK 242
KQKKQ EG KK
Sbjct: 483 KQKKQHEGGKK 493
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 157/186 (84%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +E+FY LG+ Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGVPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTETG+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTETGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKK 488
EG KK
Sbjct: 488 HEGGKK 493
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NTYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|66509916|ref|XP_396462.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like isoform 1 [Apis
mellifera]
Length = 496
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/238 (68%), Positives = 191/238 (80%), Gaps = 16/238 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + E E+++KYLIATSEQPI A HR+ W+PE LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSERN----EDKEIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSP+D++SW+M++EMI N+EEFY L I YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKVEQFCLTSPYDNKSWQMMEEMISNAEEFYKSLEIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 366 SGALNNAASKKLDLEAWFPGSNAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
+ AT CA TRVICAILE HQT+TG+++P L +F+P Y N EIPFVK APIDE E
Sbjct: 426 LNATMCAVTRVICAILEVHQTDTGIKVPKVLAQFMPMEYEN---EIPFVKPAPIDETE 480
Score = 275 bits (704), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 128/173 (73%), Positives = 147/173 (84%), Gaps = 3/173 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSP+D++SW+ ++EMI N+EEFY L I YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKVEQFCLTSPYDNKSWQMMEEMISNAEEFYKSLEIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFPGS AFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 371 NAASKKLDLEAWFPGSNAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
CA TRVICAILE HQT+TG+++P L +F+P Y N EIPFVK APIDE E
Sbjct: 431 CAVTRVICAILEVHQTDTGIKVPKVLAQFMPMEYEN---EIPFVKPAPIDETE 480
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG + E E+++KYLIATSEQPI A HR+ W+PE LPI+Y G+STCFR
Sbjct: 247 LYKVIGKGSERN----EDKEIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAGLSTCFR 302
Query: 574 QEC 576
QE
Sbjct: 303 QEV 305
>gi|321471906|gb|EFX82878.1| hypothetical protein DAPPUDRAFT_187913 [Daphnia pulex]
Length = 490
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 166/238 (69%), Positives = 188/238 (78%), Gaps = 16/238 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + E E+D+KYLIATSEQPI A HRD W+ E+ LP RY G+STCFRQEV
Sbjct: 251 VIGKGSE----KAEDKEVDEKYLIATSEQPIAAFHRDEWMKESELPKRYAGISTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQF+KVEQF +TSPHD+ SW+M+DEMI N+E FY L I YR+VNIV
Sbjct: 307 GSHGRDTRGIFRVHQFQKVEQFCITSPHDNLSWQMMDEMIGNAEAFYQALNIPYRIVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLL+RYGQTK+
Sbjct: 367 SGALNNAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLIRYGQTKKMNATTDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
+ AT CATTRVICAILE +QT TG+ IP+ L+ F+P Y A EIPF K APIDE E
Sbjct: 427 LNATMCATTRVICAILELNQTATGIVIPEVLKPFMPPAY---AEEIPFTKPAPIDELE 481
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/173 (74%), Positives = 145/173 (83%), Gaps = 3/173 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVEQF +TSPHD+ SW+ +DEMI N+E FY L I YR+VNIVSGALN
Sbjct: 312 DTRGIFRVHQFQKVEQFCITSPHDNLSWQMMDEMIGNAEAFYQALNIPYRIVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFPGSGAFRELVSCSNCL YQSRRLL+RYGQTKKMN ++VHMLNAT
Sbjct: 372 NAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLIRYGQTKKMNATTDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
CATTRVICAILE +QT TG+ IP+ L+ F+P Y A EIPF K APIDE E
Sbjct: 432 CATTRVICAILELNQTATGIVIPEVLKPFMPPAY---AEEIPFTKPAPIDELE 481
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + ++ L +VIGKG + E E+D+KYLIATSEQPI A HRD W+ E+ LP
Sbjct: 238 VAQLSQFDDELYKVIGKGSE----KAEDKEVDEKYLIATSEQPIAAFHRDEWMKESELPK 293
Query: 564 RYLGVSTCFRQEC 576
RY G+STCFRQE
Sbjct: 294 RYAGISTCFRQEV 306
>gi|432103916|gb|ELK30749.1| Seryl-tRNA synthetase, cytoplasmic [Myotis davidii]
Length = 491
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 196/252 (77%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 227 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 282
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 283 GSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFEEMISTAEEFYQTLGIPYHIVNIV 342
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 343 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 402
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 403 LNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 459
Query: 232 KQKKQKEGMKKK 243
KQKKQ+EG K K
Sbjct: 460 KQKKQQEGSKNK 471
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 156/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 288 DTRGIFRVHQFEKIEQFVYASPHDNKSWEMFEEMISTAEEFYQTLGIPYHIVNIVSGSLN 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 348 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 407
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 408 CATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 464
Query: 483 KEGMKKK 489
+EG K K
Sbjct: 465 QEGSKNK 471
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 214 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 269
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 270 KYAGLSTCFRQEV 282
>gi|73959359|ref|XP_866214.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic isoform 3 [Canis
lupus familiaris]
Length = 513
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 249 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 304
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +E+FY LGI Y +VNIV
Sbjct: 305 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIV 364
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 424
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 425 LNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 481
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 482 KQKKQHEGSKKK 493
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +E+FY LGI Y +VNIVSG+LN
Sbjct: 310 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIVSGSLN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 370 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 429
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 430 CATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 486
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 487 HEGSKKK 493
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 236 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 291
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 292 KYAGLSTCFRQEV 304
>gi|301767668|ref|XP_002919248.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Ailuropoda
melanoleuca]
Length = 513
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 249 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 304
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +E+FY LGI Y +VNIV
Sbjct: 305 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIV 364
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 424
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 425 LNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 481
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 482 KQKKQHEGSKKK 493
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +E+FY LGI Y +VNIVSG+LN
Sbjct: 310 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIVSGSLN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 370 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 429
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 430 CATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 486
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 487 HEGSKKK 493
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 236 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 291
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 292 KYAGLSTCFRQEV 304
>gi|307213057|gb|EFN88588.1| Seryl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
Length = 493
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/251 (69%), Positives = 200/251 (79%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + E EL++KYLIATSEQPI A HR W+ E++LPIRY G+STCFRQEV
Sbjct: 250 VIGKGSERN----EDKELEEKYLIATSEQPIAAFHRGEWIAESALPIRYAGISTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSPHD++SW+M++EMI N+EEFY L I YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMISNAEEFYQALNIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYG+TK+
Sbjct: 366 SGALNHAASKKLDLEAWFPGSRAFRELVSCSNCLDYQARRLLVRYGKTKKMNTTTDYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CA TRVICAILE HQTETGV++P+ L ++P Y +IPFVK API+E ETK
Sbjct: 426 LNATMCAVTRVICAILEVHQTETGVKVPEILMDYMPLGY---KKQIPFVKPAPINEVETK 482
Query: 232 KQKKQKEGMKK 242
KQKKQKE K
Sbjct: 483 KQKKQKENASK 493
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/186 (73%), Positives = 156/186 (83%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSPHD++SW+ ++EMI N+EEFY L I YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMISNAEEFYQALNIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGS AFRELVSCSNCL YQ+RRLLVRYG+TKKMN ++VHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSRAFRELVSCSNCLDYQARRLLVRYGKTKKMNTTTDYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA TRVICAILE HQTETGV++P+ L ++P Y +IPFVK API+E ETKKQKKQ
Sbjct: 431 CAVTRVICAILEVHQTETGVKVPEILMDYMPLGY---KKQIPFVKPAPINEVETKKQKKQ 487
Query: 483 KEGMKK 488
KE K
Sbjct: 488 KENASK 493
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG + E EL++KYLIATSEQPI A HR W+ E++LPIRY G+STCFR
Sbjct: 247 LYKVIGKGSERN----EDKELEEKYLIATSEQPIAAFHRGEWIAESALPIRYAGISTCFR 302
Query: 574 QEC 576
QE
Sbjct: 303 QEV 305
>gi|380025542|ref|XP_003696530.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Apis florea]
Length = 496
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/238 (68%), Positives = 191/238 (80%), Gaps = 16/238 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + E E+++KYLIATSEQPI A HR+ W+PE LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSERN----EDKEIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSP+D++SW+M++EMI N+EEFY L I YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKVEQFCLTSPYDNKSWQMMEEMILNAEEFYKSLEIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 366 SGALNNAASKKLDLEAWFPGSNAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
+ AT CA TRVICAILE HQT+TG+++P L +F+P Y N EIPFVK APIDE E
Sbjct: 426 LNATMCAVTRVICAILEVHQTDTGIKVPKVLAQFMPMEYEN---EIPFVKPAPIDETE 480
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/173 (73%), Positives = 147/173 (84%), Gaps = 3/173 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSP+D++SW+ ++EMI N+EEFY L I YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKVEQFCLTSPYDNKSWQMMEEMILNAEEFYKSLEIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFPGS AFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 371 NAASKKLDLEAWFPGSNAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
CA TRVICAILE HQT+TG+++P L +F+P Y N EIPFVK APIDE E
Sbjct: 431 CAVTRVICAILEVHQTDTGIKVPKVLAQFMPMEYEN---EIPFVKPAPIDETE 480
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIGKG + E E+++KYLIATSEQPI A HR+ W+PE LPI+Y G+STCFR
Sbjct: 247 LYKVIGKGSERN----EDKEIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAGLSTCFR 302
Query: 574 QEC 576
QE
Sbjct: 303 QEV 305
>gi|340714550|ref|XP_003395790.1| PREDICTED: LOW QUALITY PROTEIN: seryl-tRNA synthetase,
cytoplasmic-like [Bombus terrestris]
Length = 429
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/239 (69%), Positives = 190/239 (79%), Gaps = 16/239 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D E+++KYLIATSEQPI A HR+ W+PE LPI+Y G+STCFRQEV
Sbjct: 183 VIGKGSERNDDK----EIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAGLSTCFRQEV 238
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSP+DD+SW+M++EMI N+EEFY L I YR+VNIV
Sbjct: 239 GSHGRDTRGIFRVHQFEKVEQFCLTSPYDDKSWQMMEEMISNAEEFYKSLEIPYRIVNIV 298
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 299 SGALNNAASKKLDLEAWFPGSSAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHM 358
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CA TRVICAILE HQT+T V++P L +F+PA Y EIPFVK APIDE E
Sbjct: 359 LNATMCAVTRVICAILEVHQTDTSVKVPKVLAQFMPAEY---EYEIPFVKPAPIDETEV 414
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 146/174 (83%), Gaps = 3/174 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSP+DD+SW+ ++EMI N+EEFY L I YR+VNIVSGALN
Sbjct: 244 DTRGIFRVHQFEKVEQFCLTSPYDDKSWQMMEEMISNAEEFYKSLEIPYRIVNIVSGALN 303
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFPGS AFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 304 NAASKKLDLEAWFPGSSAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHMLNATM 363
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476
CA TRVICAILE HQT+T V++P L +F+PA Y EIPFVK APIDE E
Sbjct: 364 CAVTRVICAILEVHQTDTSVKVPKVLAQFMPAEY---EYEIPFVKPAPIDETEV 414
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D E+++KYLIATSEQPI A HR+ W+PE LPI
Sbjct: 170 VAQLSQFDEELYKVIGKGSERNDDK----EIEEKYLIATSEQPIAAFHRNEWIPENILPI 225
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 226 KYAGLSTCFRQEV 238
>gi|405956013|gb|EKC22875.1| Seryl-tRNA synthetase, cytoplasmic [Crassostrea gigas]
Length = 509
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/241 (68%), Positives = 193/241 (80%), Gaps = 16/241 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D ++ +D+KYLIATSEQPI A HRD W+P LPI+YLG STCFRQEV
Sbjct: 250 VIGKGSEKAD----ENSVDEKYLIATSEQPIAAFHRDEWVPTDDLPIKYLGYSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFVLTSP +++SW+M DEMI N+EEF LGI YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVLTSPFENKSWEMFDEMINNAEEFNKLLGIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AA+KKLDLEAWFP SGAFRELVSCSNCLDYQ+RRL VRYGQTK+
Sbjct: 366 SGALNNAASKKLDLEAWFPASGAFRELVSCSNCLDYQARRLKVRYGQTKKMNQEADYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +Q E GV +P+ LRK++P Y NE ++PFVK APID+EE+K
Sbjct: 426 LNATMCATTRTICAILENYQVEDGVIVPEALRKYMPPGY-NE--KLPFVKPAPIDQEESK 482
Query: 232 K 232
K
Sbjct: 483 K 483
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/176 (72%), Positives = 151/176 (85%), Gaps = 3/176 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFVLTSP +++SW+ DEMI N+EEF LGI YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFVLTSPFENKSWEMFDEMINNAEEFNKLLGIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFP SGAFRELVSCSNCL YQ+RRL VRYGQTKKMN++ ++VHMLNAT
Sbjct: 371 NAASKKLDLEAWFPASGAFRELVSCSNCLDYQARRLKVRYGQTKKMNQEADYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
CATTR ICAILE +Q E GV +P+ LRK++P Y NE ++PFVK APID+EE+KK
Sbjct: 431 CATTRTICAILENYQVEDGVIVPEALRKYMPPGY-NE--KLPFVKPAPIDQEESKK 483
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + ++ L +VIGKG + D ++ +D+KYLIATSEQPI A HRD W+P LPI
Sbjct: 237 VAQLSQFDDELYKVIGKGSEKAD----ENSVDEKYLIATSEQPIAAFHRDEWVPTDDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+YLG STCFRQE
Sbjct: 293 KYLGYSTCFRQEV 305
>gi|410947985|ref|XP_003980722.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Felis catus]
Length = 513
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 196/252 (77%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y +STCFRQEV
Sbjct: 249 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYASLSTCFRQEV 304
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +E+FY LGI Y +VNIV
Sbjct: 305 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEDFYQSLGIPYHIVNIV 364
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI-------- 172
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+ I
Sbjct: 365 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMIDKVEFVHM 424
Query: 173 -YATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 425 LNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 481
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 482 KQKKQHEGSKKK 493
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +E+FY LGI Y +VNIVSG+LN
Sbjct: 310 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEDFYQSLGIPYHIVNIVSGSLN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 370 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMIDKVEFVHMLNATM 429
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 430 CATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 486
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 487 HEGSKKK 493
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 236 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 291
Query: 564 RYLGVSTCFRQEC 576
+Y +STCFRQE
Sbjct: 292 KYASLSTCFRQEV 304
>gi|327271375|ref|XP_003220463.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Anolis
carolinensis]
Length = 514
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 194/252 (76%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + D + +D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VLGKGSERSDD----NTIDEKYLIATSEQPIAALHRDEWLKPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ IP+ LR F+P L E I FVK APID+E +K
Sbjct: 426 LNATMCATTRAICAILENYQTEEGIVIPEKLRDFMPP-GLKEM--IKFVKAAPIDQELSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGGKKK 494
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/188 (70%), Positives = 151/188 (80%), Gaps = 3/188 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGS AFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ IP+ LR F+P I FVK APID+E +KKQKKQ
Sbjct: 431 CATTRAICAILENYQTEEGIVIPEKLRDFMPPGLKE---MIKFVKAAPIDQELSKKQKKQ 487
Query: 483 KEGMKKKV 490
EG KKK
Sbjct: 488 HEGGKKKT 495
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + D + +D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVLGKGSERSDD----NTIDEKYLIATSEQPIAALHRDEWLKPEDLPI 292
Query: 564 RYLGVSTCFRQE 575
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQE 304
>gi|326935581|ref|XP_003213848.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like, partial
[Meleagris gallopavo]
Length = 467
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 168/253 (66%), Positives = 197/253 (77%), Gaps = 18/253 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ +D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 203 VIGKGSEKAEDSS-----IDEKYLIATSEQPIAALHRDEWLKPEDLPIKYAGLSTCFRQE 257
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV SPHD++SW+M DEMI +EEFY LGI Y +VNI
Sbjct: 258 VGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNI 317
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +R+GQTK+
Sbjct: 318 VSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKKMMDKVEFVH 377
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTR ICAILE +QTE G+ +P+ LR F+P + I FVK API++E +
Sbjct: 378 MLNATMCATTRTICAILENYQTEEGIVVPERLRDFMPP---DLRQIIRFVKPAPIEQELS 434
Query: 231 KKQKKQKEGMKKK 243
KKQKKQ+EG +KK
Sbjct: 435 KKQKKQQEGGRKK 447
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 159/198 (80%), Gaps = 3/198 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD++SW+ DEMI +EEFY LGI Y +VNIVSGALN
Sbjct: 264 DTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGALN 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +R+GQTKKM +K+EFVHMLNAT
Sbjct: 324 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKKMMDKVEFVHMLNATM 383
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR F+P + I FVK API++E +KKQKKQ
Sbjct: 384 CATTRTICAILENYQTEEGIVVPERLRDFMPP---DLRQIIRFVKPAPIEQELSKKQKKQ 440
Query: 483 KEGMKKKVLIDEAMIQNE 500
+EG +KK E +++ +
Sbjct: 441 QEGGRKKAAGGERLLEEQ 458
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ +D+KYLIATSEQPI A+HRD WL LP
Sbjct: 190 VAQLSQFDEELYKVIGKGSEKAEDSS-----IDEKYLIATSEQPIAALHRDEWLKPEDLP 244
Query: 563 IRYLGVSTCFRQECDA 578
I+Y G+STCFRQE +
Sbjct: 245 IKYAGLSTCFRQEVGS 260
>gi|350411130|ref|XP_003489249.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Bombus
impatiens]
Length = 496
Score = 338 bits (868), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 164/239 (68%), Positives = 189/239 (79%), Gaps = 16/239 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D E+++KYLIATSEQPI A HR+ W+PE LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSERNDDK----EIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSP+DD+SW+M++EMI N+EEFY L I YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKVEQFCLTSPYDDKSWQMMEEMISNAEEFYKSLEIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 366 SGALNNAASKKLDLEAWFPGSSAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CA TRVICAILE HQT+T V++P L +F+P Y EIPFVK APIDE E
Sbjct: 426 LNATMCAVTRVICAILEVHQTDTSVKVPKVLAQFMPTEY---EYEIPFVKPAPIDETEV 481
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 128/174 (73%), Positives = 145/174 (83%), Gaps = 3/174 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSP+DD+SW+ ++EMI N+EEFY L I YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKVEQFCLTSPYDDKSWQMMEEMISNAEEFYKSLEIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFPGS AFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 371 NAASKKLDLEAWFPGSSAFRELVSCSNCLDYQARRLLVRYGQTKKMNANTDYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476
CA TRVICAILE HQT+T V++P L +F+P Y EIPFVK APIDE E
Sbjct: 431 CAVTRVICAILEVHQTDTSVKVPKVLAQFMPTEY---EYEIPFVKPAPIDETEV 481
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D E+++KYLIATSEQPI A HR+ W+PE LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSERNDDK----EIEEKYLIATSEQPIAAFHRNEWIPENILPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|74212487|dbj|BAE30986.1| unnamed protein product [Mus musculus]
Length = 511
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 195/252 (77%), Gaps = 17/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCF QEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCF-QEV 304
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 305 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIV 364
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 424
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +Q E G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 425 LNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 481
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 482 KQKKQHEGSKKK 493
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 156/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 310 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 370 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 429
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 430 CATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 486
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 487 HEGSKKK 493
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQECDAGM-CRTYFHV 587
+Y G+STCF++ G R F V
Sbjct: 293 KYAGLSTCFQEVGSHGRDTRGIFRV 317
>gi|71897227|ref|NP_001026563.1| seryl-tRNA synthetase, cytoplasmic [Gallus gallus]
gi|53127678|emb|CAG31168.1| hypothetical protein RCJMB04_2o24 [Gallus gallus]
Length = 514
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/253 (66%), Positives = 197/253 (77%), Gaps = 18/253 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ +D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 250 VIGKGSEKAEDSS-----VDEKYLIATSEQPIAALHRDEWLKPEDLPIKYAGLSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV SPHD++SW+M DEMI +EEFY LGI Y +VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +R+GQTK+
Sbjct: 365 VSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKKMMDKVEFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTR ICAILE +QTE G+ +P+ LR F+P + I FVK API++E +
Sbjct: 425 MLNATMCATTRTICAILENYQTEEGIVVPERLRDFMPP---DLRQIIRFVKPAPIEQELS 481
Query: 231 KKQKKQKEGMKKK 243
KKQKKQ+EG +KK
Sbjct: 482 KKQKKQQEGGRKK 494
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 159/198 (80%), Gaps = 3/198 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD++SW+ DEMI +EEFY LGI Y +VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +R+GQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR F+P + I FVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEEGIVVPERLRDFMPP---DLRQIIRFVKPAPIEQELSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQNE 500
+EG +KK E +++ +
Sbjct: 488 QEGGRKKAAGGERVLEEQ 505
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ +D+KYLIATSEQPI A+HRD WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKAEDSS-----VDEKYLIATSEQPIAALHRDEWLKPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y G+STCFRQE
Sbjct: 292 IKYAGLSTCFRQEV 305
>gi|149025695|gb|EDL81938.1| seryl-aminoacyl-tRNA synthetase 1, isoform CRA_a [Rattus
norvegicus]
Length = 536
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/277 (62%), Positives = 198/277 (71%), Gaps = 42/277 (15%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y G STCFRQE
Sbjct: 250 VIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 VSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNL 424
Query: 171 ------------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFV 206
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+
Sbjct: 425 RFSTQNKLEAVSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLREFM 484
Query: 207 PAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
P L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 485 PP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 137/222 (61%), Positives = 162/222 (72%), Gaps = 29/222 (13%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE------------ 410
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLRFSTQN 430
Query: 411 ------------KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 458
K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P +
Sbjct: 431 KLEAVSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLREFMPP-GLQ 489
Query: 459 EAGEIPFVKTAPIDEEETKKQKKQKEGMKKKVLIDEAMIQNE 500
E IPFVK APID+E +KKQKKQ EG KKK E ++N+
Sbjct: 490 EL--IPFVKPAPIDQEPSKKQKKQHEGSKKKA--KEVTLENQ 527
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y G STCFRQE
Sbjct: 292 IKYAGFSTCFRQEV 305
>gi|148231408|ref|NP_001080487.1| seryl-tRNA synthetase [Xenopus laevis]
gi|27697084|gb|AAH43975.1| Sars-prov protein [Xenopus laevis]
Length = 510
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 197/261 (75%), Gaps = 16/261 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGK + D + +D+KYLIATSEQPI A+HRD WL LPIRY G+STCFRQEV
Sbjct: 249 VIGKSSEKSDD----NSIDEKYLIATSEQPIAALHRDEWLKPEDLPIRYAGLSTCFRQEV 304
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPHD++SW+ML+EMI +E FY LGI YR+VNIV
Sbjct: 305 GSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMLEEMIMTAESFYQMLGIPYRIVNIV 364
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 SGSLNHAASKKLDLEAWFPGSSAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 424
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRVICAILE +QTE G+ IP+ LR F+P + I FVK APID+E +K
Sbjct: 425 LNATMCATTRVICAILENYQTEEGIVIPEKLRDFMPPGLKD---IIKFVKPAPIDQELSK 481
Query: 232 KQKKQKEGMKKKLTMSLFSQV 252
KQKKQ+E KK L SQ+
Sbjct: 482 KQKKQQERGKKTENCGLDSQM 502
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 153/186 (82%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD++SW+ L+EMI +E FY LGI YR+VNIVSG+LN
Sbjct: 310 DTRGIFRVHQFEKIEQFVYASPHDNKSWEMLEEMIMTAESFYQMLGIPYRIVNIVSGSLN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGS AFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 370 HAASKKLDLEAWFPGSSAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 429
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE +QTE G+ IP+ LR F+P + I FVK APID+E +KKQKKQ
Sbjct: 430 CATTRVICAILENYQTEEGIVIPEKLRDFMPPGLKD---IIKFVKPAPIDQELSKKQKKQ 486
Query: 483 KEGMKK 488
+E KK
Sbjct: 487 QERGKK 492
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGK + D + +D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 236 VAQLSQFDEELYKVIGKSSEKSDD----NSIDEKYLIATSEQPIAALHRDEWLKPEDLPI 291
Query: 564 RYLGVSTCFRQEC 576
RY G+STCFRQE
Sbjct: 292 RYAGLSTCFRQEV 304
>gi|14424755|gb|AAH09390.1| Seryl-tRNA synthetase [Homo sapiens]
Length = 514
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/252 (65%), Positives = 196/252 (77%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATT ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTCTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/197 (67%), Positives = 160/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATT ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTCTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAAARDVTLEN 504
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|348586984|ref|XP_003479248.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like isoform 2 [Cavia
porcellus]
Length = 538
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/276 (61%), Positives = 197/276 (71%), Gaps = 40/276 (14%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------- 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLR 425
Query: 171 -----------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFVP 207
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+P
Sbjct: 426 LSTQNNLVAVSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFMP 485
Query: 208 AVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 486 P-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 161/221 (72%), Gaps = 27/221 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE------------ 410
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLRLSTQN 430
Query: 411 ------------KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 458
K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P +
Sbjct: 431 NLVAVSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQ 489
Query: 459 EAGEIPFVKTAPIDEEETKKQKKQKEGMKKKVLIDEAMIQN 499
E IPFVK APID+E +KKQKKQ EG KKK + ++N
Sbjct: 490 EL--IPFVKPAPIDQEPSKKQKKQHEGSKKKAATRDVTLEN 528
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|402913100|ref|XP_003919064.1| PREDICTED: LOW QUALITY PROTEIN: serine--tRNA ligase, cytoplasmic
[Papio anubis]
Length = 539
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 168/274 (61%), Positives = 197/274 (71%), Gaps = 38/274 (13%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 253 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 308
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 309 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 368
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------- 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 369 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLH 428
Query: 171 ---------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 209
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P
Sbjct: 429 LSTQNKLEASLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP- 487
Query: 210 YLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 488 GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 519
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 157/209 (75%), Gaps = 25/209 (11%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 314 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 373
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE------------ 410
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +
Sbjct: 374 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLHLSTQN 433
Query: 411 ----------KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEA 460
K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E
Sbjct: 434 KLEASLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL 492
Query: 461 GEIPFVKTAPIDEEETKKQKKQKEGMKKK 489
IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 493 --IPFVKPAPIDQEPSKKQKKQHEGSKKK 519
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 240 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 295
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFRQE +
Sbjct: 296 KYAGLSTCFRQEVGS 310
>gi|390466284|ref|XP_003733555.1| PREDICTED: serine--tRNA ligase, cytoplasmic isoform 2 [Callithrix
jacchus]
Length = 534
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/274 (61%), Positives = 197/274 (71%), Gaps = 38/274 (13%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------- 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLH 425
Query: 171 ---------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 209
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+P
Sbjct: 426 LSTQNKLEASYFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP- 484
Query: 210 YLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 485 GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 516
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 157/209 (75%), Gaps = 25/209 (11%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE------------ 410
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLHLSTQN 430
Query: 411 ----------KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEA 460
K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P + E
Sbjct: 431 KLEASYFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQEL 489
Query: 461 GEIPFVKTAPIDEEETKKQKKQKEGMKKK 489
IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 490 --IPFVKPAPIDQEPSKKQKKQHEGSKKK 516
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|111494145|gb|AAI11399.1| SARS protein [Homo sapiens]
Length = 511
Score = 336 bits (861), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 195/252 (77%), Gaps = 19/252 (7%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ KF+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPE---KFMPP-GLQEL--IPFVKPAPIEQEPSK 479
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 480 KQKKQHEGSKKK 491
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 159/197 (80%), Gaps = 6/197 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ KF+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPE---KFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 484
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 485 HEGSKKKAAARDVTLEN 501
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|354506524|ref|XP_003515310.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic isoform 2 [Cricetulus
griseus]
Length = 536
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 172/277 (62%), Positives = 199/277 (71%), Gaps = 42/277 (15%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQE
Sbjct: 250 VIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 VSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNL 424
Query: 171 ------------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFV 206
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+
Sbjct: 425 RFSTQNKLEAMSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFM 484
Query: 207 PAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
P L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 485 PP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/223 (61%), Positives = 163/223 (73%), Gaps = 29/223 (13%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE------------ 410
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLRFSTQN 430
Query: 411 ------------KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 458
K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ LR+F+P +
Sbjct: 431 KLEAMSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLREFMPP-GLQ 489
Query: 459 EAGEIPFVKTAPIDEEETKKQKKQKEGMKKKV--LIDEAMIQN 499
E IPFVK APID+E +KKQKKQ EG KKK + E+ +QN
Sbjct: 490 EL--IPFVKPAPIDQEPSKKQKKQHEGSKKKAKEVTLESQLQN 530
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y G+STCFRQE
Sbjct: 292 IKYAGLSTCFRQEV 305
>gi|332374480|gb|AEE62381.1| unknown [Dendroctonus ponderosae]
Length = 492
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 166/235 (70%), Positives = 187/235 (79%), Gaps = 16/235 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGK + +S E+D+KYLIATSEQPI A HRD WLPE+ LPIRY G+STCFRQEV
Sbjct: 251 VIGKSSENAESK----EVDEKYLIATSEQPIAAFHRDEWLPESVLPIRYAGLSTCFRQEV 306
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQF LTSP D++SW+M+DEMI N+E FY L I YRVVNIV
Sbjct: 307 GSHGRDTRGIFRVHQFEKVEQFCLTSPFDNKSWEMMDEMIGNAEAFYQALEIPYRVVNIV 366
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AA+KKLDLEAWFPGSGAFRELVSCSNCL+YQ+RRLLVRYGQTK+
Sbjct: 367 SGALNNAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATDYVHM 426
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+ AT CATTRVICAILE HQTE G+R+P LR F+P Y + I FVK APID
Sbjct: 427 LNATMCATTRVICAILEVHQTEEGIRVPAGLRDFLPEPYRD---LIRFVKPAPID 478
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/170 (75%), Positives = 142/170 (83%), Gaps = 3/170 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSP D++SW+ +DEMI N+E FY L I YRVVNIVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFCLTSPFDNKSWEMMDEMIGNAEAFYQALEIPYRVVNIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMN ++VHMLNAT
Sbjct: 372 NAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATDYVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CATTRVICAILE HQTE G+R+P LR F+P Y + I FVK APID
Sbjct: 432 CATTRVICAILEVHQTEEGIRVPAGLRDFLPEPYRD---LIRFVKPAPID 478
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGK + +S E+D+KYLIATSEQPI A HRD WLPE+ LPI
Sbjct: 238 VAQLSQFDEELYKVIGKSSENAESK----EVDEKYLIATSEQPIAAFHRDEWLPESVLPI 293
Query: 564 RYLGVSTCFRQEC 576
RY G+STCFRQE
Sbjct: 294 RYAGLSTCFRQEV 306
>gi|62896913|dbj|BAD96397.1| seryl-tRNA synthetase variant [Homo sapiens]
Length = 514
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/252 (65%), Positives = 195/252 (77%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EE Y LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEELYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+ +HAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSSSHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 275 bits (704), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 130/197 (65%), Positives = 159/197 (80%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EE Y LGI Y +VNIVSG+ +
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEELYQSLGIPYHIVNIVSGSSS 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAAARDVTLEN 504
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|291398353|ref|XP_002715854.1| PREDICTED: seryl-tRNA synthetase isoform 1 [Oryctolagus cuniculus]
Length = 538
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/276 (60%), Positives = 197/276 (71%), Gaps = 40/276 (14%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------- 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLP 425
Query: 171 -----------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFVP 207
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P
Sbjct: 426 LSAQNKLEATSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLKEFMP 485
Query: 208 AVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 486 P-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 161/221 (72%), Gaps = 27/221 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE------------ 410
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLPLSAQN 430
Query: 411 ------------KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 458
K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P +
Sbjct: 431 KLEATSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKLKEFMPP-GLQ 489
Query: 459 EAGEIPFVKTAPIDEEETKKQKKQKEGMKKKVLIDEAMIQN 499
E IPFVK APID+E +KKQKKQ EG KKK + ++N
Sbjct: 490 EL--IPFVKPAPIDQEPSKKQKKQHEGSKKKAAARDVTLEN 528
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|351708749|gb|EHB11668.1| Seryl-tRNA synthetase, cytoplasmic [Heterocephalus glaber]
Length = 538
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/278 (60%), Positives = 197/278 (70%), Gaps = 40/278 (14%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPHD +SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYASPHDSKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------- 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYG+TK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGKTKKMMDKRRKNLY 425
Query: 171 -----------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFVP 207
+ AT CATTR ICAILE +QTE G+ +PD L++F+P
Sbjct: 426 LPTQNNFVAVPSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPDKLKEFMP 485
Query: 208 AVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLT 245
L E IPFVK APID+E +KKQKKQ EG KKK++
Sbjct: 486 P-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKKVS 520
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 162/222 (72%), Gaps = 27/222 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD +SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDSKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE------------ 410
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYG+TKKM +
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGKTKKMMDKRRKNLYLPTQN 430
Query: 411 ------------KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 458
K+EFVHMLNAT CATTR ICAILE +QTE G+ +PD L++F+P +
Sbjct: 431 NFVAVPSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPDKLKEFMPP-GLQ 489
Query: 459 EAGEIPFVKTAPIDEEETKKQKKQKEGMKKKVLIDEAMIQNE 500
E IPFVK APID+E +KKQKKQ EG KKKV +A ++N+
Sbjct: 490 EL--IPFVKPAPIDQEPSKKQKKQHEGSKKKVSTRDATLENQ 529
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|33468931|ref|NP_035449.1| serine--tRNA ligase, cytoplasmic isoform 1 [Mus musculus]
gi|26349967|dbj|BAC38623.1| unnamed protein product [Mus musculus]
gi|148670022|gb|EDL01969.1| seryl-aminoacyl-tRNA synthetase, isoform CRA_b [Mus musculus]
Length = 536
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 169/276 (61%), Positives = 196/276 (71%), Gaps = 40/276 (14%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------- 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKKKNNLR 425
Query: 172 ------------------------IYATACATTRVICAILETHQTETGVRIPDCLRKFVP 207
+ AT CATTR ICAILE +Q E G+ +P+ LR+F+P
Sbjct: 426 FSTQNKLKAMSSLFSPKKVEFVHMLNATMCATTRTICAILENYQAEKGIAVPEKLREFMP 485
Query: 208 AVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 486 P-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 156/211 (73%), Gaps = 27/211 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQT----------------- 405
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKKKNNLRFSTQN 430
Query: 406 --KKMN-----EKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVN 458
K M+ +K+EFVHMLNAT CATTR ICAILE +Q E G+ +P+ LR+F+P +
Sbjct: 431 KLKAMSSLFSPKKVEFVHMLNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQ 489
Query: 459 EAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 489
E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 490 EL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 518
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|281341624|gb|EFB17208.1| hypothetical protein PANDA_007865 [Ailuropoda melanoleuca]
Length = 536
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/275 (60%), Positives = 197/275 (71%), Gaps = 39/275 (14%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 249 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 304
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +E+FY LGI Y +VNIV
Sbjct: 305 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIV 364
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------- 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKIKNNPH 424
Query: 171 ----------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPA 208
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P
Sbjct: 425 LSTEDTLKAVSSLSLGKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP 484
Query: 209 VYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 485 -GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 516
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 157/210 (74%), Gaps = 26/210 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +E+FY LGI Y +VNIVSG+LN
Sbjct: 310 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIVSGSLN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI---------- 412
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +KI
Sbjct: 370 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKIKNNPHLSTED 429
Query: 413 -------------EFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNE 459
EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E
Sbjct: 430 TLKAVSSLSLGKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQE 488
Query: 460 AGEIPFVKTAPIDEEETKKQKKQKEGMKKK 489
IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 489 L--IPFVKPAPIDQEPSKKQKKQHEGSKKK 516
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 236 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 291
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 292 KYAGLSTCFRQEV 304
>gi|119576772|gb|EAW56368.1| seryl-tRNA synthetase, isoform CRA_d [Homo sapiens]
Length = 539
Score = 332 bits (852), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 168/277 (60%), Positives = 199/277 (71%), Gaps = 41/277 (14%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----------- 169
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLH 425
Query: 170 --------------QKIY---------ATACATTRVICAILETHQTETGVRIPDCLRKFV 206
+K++ AT CATTR ICAILE +QTE G+ +P+ L++F+
Sbjct: 426 LSTQNKLEASLFSPKKVWVVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFM 485
Query: 207 PAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
P L E IPFVK API++E +KKQKKQ EG KKK
Sbjct: 486 PP-GLQEL--IPFVKPAPIEQEPSKKQKKQHEGSKKK 519
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 161/222 (72%), Gaps = 28/222 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK----------- 411
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLHLSTQN 430
Query: 412 --------------IEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P +
Sbjct: 431 KLEASLFSPKKVWVVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GL 489
Query: 458 NEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKVLIDEAMIQN 499
E IPFVK API++E +KKQKKQ EG KKK + ++N
Sbjct: 490 QEL--IPFVKPAPIEQEPSKKQKKQHEGSKKKAAARDVTLEN 529
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|426330695|ref|XP_004026342.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Gorilla gorilla
gorilla]
Length = 508
Score = 332 bits (850), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/277 (60%), Positives = 199/277 (71%), Gaps = 41/277 (14%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 219 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 274
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 275 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 334
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----------- 169
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK
Sbjct: 335 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLH 394
Query: 170 --------------QKIY---------ATACATTRVICAILETHQTETGVRIPDCLRKFV 206
+K++ AT CATTR ICAILE +QTE G+ +P+ L++F+
Sbjct: 395 LSTQNKLEASLFSPKKVWVVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFM 454
Query: 207 PAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
P L E IPFVK API++E +KKQKKQ EG KKK
Sbjct: 455 PPG-LQEL--IPFVKPAPIEQEPSKKQKKQHEGSKKK 488
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 161/222 (72%), Gaps = 28/222 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 280 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 339
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK----------- 411
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K
Sbjct: 340 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLHLSTQN 399
Query: 412 --------------IEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P +
Sbjct: 400 KLEASLFSPKKVWVVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPG-L 458
Query: 458 NEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKVLIDEAMIQN 499
E IPFVK API++E +KKQKKQ EG KKK + ++N
Sbjct: 459 QEL--IPFVKPAPIEQEPSKKQKKQHEGSKKKAAARDVTLEN 498
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 206 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 261
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFRQE +
Sbjct: 262 KYAGLSTCFRQEVGS 276
>gi|410967976|ref|XP_003990489.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Felis catus]
Length = 557
Score = 331 bits (849), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/275 (60%), Positives = 197/275 (71%), Gaps = 39/275 (14%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 270 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 325
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +E+FY LGI Y +VNIV
Sbjct: 326 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEDFYQSLGIPYHIVNIV 385
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------- 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 386 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKIKDNHH 445
Query: 171 ----------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPA 208
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P
Sbjct: 446 LSIENKLKAVSSLSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP 505
Query: 209 VYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 506 -GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKK 537
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 157/210 (74%), Gaps = 26/210 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +E+FY LGI Y +VNIVSG+LN
Sbjct: 331 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEDFYQSLGIPYHIVNIVSGSLN 390
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI---------- 412
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +KI
Sbjct: 391 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKIKDNHHLSIEN 450
Query: 413 -------------EFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNE 459
EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P + E
Sbjct: 451 KLKAVSSLSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLKEFMPP-GLQE 509
Query: 460 AGEIPFVKTAPIDEEETKKQKKQKEGMKKK 489
IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 510 L--IPFVKPAPIDQEPSKKQKKQHEGSKKK 537
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 257 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 312
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 313 KYAGLSTCFRQEV 325
>gi|242008599|ref|XP_002425090.1| Seryl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212508755|gb|EEB12352.1| Seryl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 490
Score = 331 bits (848), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/226 (69%), Positives = 180/226 (79%), Gaps = 12/226 (5%)
Query: 7 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRD 66
KV EK +++KYLIATSEQPI A HRD W+PE +LPI+Y G+STCFRQEVGSHGRD
Sbjct: 249 KVTGKGSEKGGVEEKYLIATSEQPIAAFHRDEWIPENNLPIKYAGISTCFRQEVGSHGRD 308
Query: 67 TRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 126
TRGIFRVHQFEKVEQFVLTSPHD++SW+M+DEMI N+EEF LGI YRVVNIVSGALNH
Sbjct: 309 TRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEEFCQSLGIPYRVVNIVSGALNH 368
Query: 127 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATAC 177
AA+KKLDLEAWFPGS AFRELVSCSNCLDYQ+RRLLVRYGQTK+ + AT C
Sbjct: 369 AASKKLDLEAWFPGSEAFRELVSCSNCLDYQARRLLVRYGQTKKMNAATEYVHMLNATMC 428
Query: 178 ATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTA 223
A TRVICA+LE HQ E G+ +P L++F+P Y N IPF+ +
Sbjct: 429 AVTRVICAVLEVHQGEEGITVPTVLKEFMPEPYKN---IIPFISSG 471
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/167 (73%), Positives = 139/167 (83%), Gaps = 3/167 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVLTSPHD++SW+ +DEMI N+EEF LGI YRVVNIVSGALN
Sbjct: 308 DTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEEFCQSLGIPYRVVNIVSGALN 367
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGS AFRELVSCSNCL YQ+RRLLVRYGQTKKMN E+VHMLNAT
Sbjct: 368 HAASKKLDLEAWFPGSEAFRELVSCSNCLDYQARRLLVRYGQTKKMNAATEYVHMLNATM 427
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTA 469
CA TRVICA+LE HQ E G+ +P L++F+P Y N IPF+ +
Sbjct: 428 CAVTRVICAVLEVHQGEEGITVPTVLKEFMPEPYKN---IIPFISSG 471
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 523 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
KV EK +++KYLIATSEQPI A HRD W+PE +LPI+Y G+STCFRQE +
Sbjct: 249 KVTGKGSEKGGVEEKYLIATSEQPIAAFHRDEWIPENNLPIKYAGISTCFRQEVGS 304
>gi|68161049|gb|AAY86956.1| seryl-tRNA synthetase [Ictalurus punctatus]
Length = 347
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/252 (65%), Positives = 191/252 (75%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG D +D+KYLIATSEQPI A RD WL LPIRY G+STCFRQEV
Sbjct: 82 VIGKGSGHSDDT----SVDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYAGISTCFRQEV 137
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPH+ +SW+M DEMI +E+FY LG+ YR+VNIV
Sbjct: 138 GSHGRDTRGIFRVHQFEKIEQFVYASPHNHKSWEMFDEMIATAEDFYQSLGLPYRIVNIV 197
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LN+AA+KKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 198 SGSLNYAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVHM 257
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRVICAILE +QT G+ IP+ LR F+P L+E I FVK APID+E +K
Sbjct: 258 LNATMCATTRVICAILENYQTAEGIIIPEPLRVFMPPD-LSEI--IKFVKAAPIDQELSK 314
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 315 KQKKQHEGGKKK 326
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 158/201 (78%), Gaps = 8/201 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPH+ +SW+ DEMI +E+FY LG+ YR+VNIVSG+LN
Sbjct: 143 DTRGIFRVHQFEKIEQFVYASPHNHKSWEMFDEMIATAEDFYQSLGLPYRIVNIVSGSLN 202
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFPGS AFRELVSCSNC YQ+RRL +RYGQTKKM +K EFVHMLNAT
Sbjct: 203 YAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVHMLNATM 262
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE +QT G+ IP+ LR F+P + + I FVK APID+E +KKQKKQ
Sbjct: 263 CATTRVICAILENYQTAEGIIIPEPLRVFMPP---DLSEIIKFVKAAPIDQELSKKQKKQ 319
Query: 483 KEGMKKKVLIDEAMIQNEKDL 503
EG KKK L D N+ DL
Sbjct: 320 HEGGKKKKLQD-----NDTDL 335
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG D +D+KYLIATSEQPI A RD WL LPI
Sbjct: 69 VAQLSQFDEELYKVIGKGSGHSDDT----SVDEKYLIATSEQPIAAFLRDEWLKPEDLPI 124
Query: 564 RYLGVSTCFRQECDA 578
RY G+STCFRQE +
Sbjct: 125 RYAGISTCFRQEVGS 139
>gi|440909687|gb|ELR59572.1| Seryl-tRNA synthetase, cytoplasmic [Bos grunniens mutus]
Length = 542
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/280 (59%), Positives = 197/280 (70%), Gaps = 44/280 (15%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------- 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVRWSLR 425
Query: 171 ---------------------------KIYATACATTRVICAILETHQTETGVRIPDCLR 203
+ AT CATTR ICAILE +QTE G+ +P+ L+
Sbjct: 426 RQAVGPFSTEWSHLILAFGGHHVEFVHMLNATMCATTRTICAILENYQTEKGILVPEKLK 485
Query: 204 KFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
+F+P L E IPFVK APID+E +KKQKKQ EG KKK
Sbjct: 486 EFMPP-GLQEL--IPFVKAAPIDQEPSKKQKKQHEGSKKK 522
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/226 (58%), Positives = 163/226 (72%), Gaps = 31/226 (13%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK----------- 411
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVRWSLRRQAVG 430
Query: 412 -----------------IEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPA 454
+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P
Sbjct: 431 PFSTEWSHLILAFGGHHVEFVHMLNATMCATTRTICAILENYQTEKGILVPEKLKEFMPP 490
Query: 455 VYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKVLIDEAMIQNE 500
+ E IPFVK APID+E +KKQKKQ EG KKK + + ++++
Sbjct: 491 -GLQEL--IPFVKAAPIDQEPSKKQKKQHEGSKKKGAVRDVALESQ 533
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|224085041|ref|XP_002196082.1| PREDICTED: serine--tRNA ligase, cytoplasmic [Taeniopygia guttata]
Length = 492
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/246 (66%), Positives = 194/246 (78%), Gaps = 18/246 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG E+ DS+ +D+KYLIATSEQPI A+HRD WL LP++Y G+STCFRQE
Sbjct: 211 VIGKGSERAEDSS-----IDEKYLIATSEQPIAALHRDEWLRPEDLPLKYAGLSTCFRQE 265
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW++ +EM+ +EEFY LGI Y +VNI
Sbjct: 266 VGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEIFEEMMATAEEFYQSLGIPYHIVNI 325
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 326 VSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVH 385
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTR ICAILE HQT G+RIP+ L+ F+P L E IPFVK API++E +
Sbjct: 386 MLNATMCATTRTICAILENHQTPEGIRIPEKLQNFMPP-DLREL--IPFVKPAPIEQELS 442
Query: 231 KKQKKQ 236
KKQKKQ
Sbjct: 443 KKQKKQ 448
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 150/180 (83%), Gaps = 3/180 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EM+ +EEFY LGI Y +VNIVSG+LN
Sbjct: 272 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEIFEEMMATAEEFYQSLGIPYHIVNIVSGSLN 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 332 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 391
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE HQT G+RIP+ L+ F+P + IPFVK API++E +KKQKKQ
Sbjct: 392 CATTRTICAILENHQTPEGIRIPEKLQNFMPP---DLRELIPFVKPAPIEQELSKKQKKQ 448
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG E+ DS+ +D+KYLIATSEQPI A+HRD WL LP
Sbjct: 198 VAQLSQFDEELYKVIGKGSERAEDSS-----IDEKYLIATSEQPIAALHRDEWLRPEDLP 252
Query: 563 IRYLGVSTCFRQECDA 578
++Y G+STCFRQE +
Sbjct: 253 LKYAGLSTCFRQEVGS 268
>gi|291236905|ref|XP_002738381.1| PREDICTED: seryl-tRNA synthetase-like [Saccoglossus kowalevskii]
Length = 518
Score = 328 bits (842), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/236 (69%), Positives = 183/236 (77%), Gaps = 18/236 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS E +KYLIATSEQPI A HRD W+P A LPI+Y G STCFRQE
Sbjct: 251 VIGKGSEKSEDSGYE-----EKYLIATSEQPIAAYHRDEWIPTADLPIKYAGYSTCFRQE 305
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEKVEQF LTSPH+++SW+M DEMI N+E FY LGI YR+VNI
Sbjct: 306 VGSHGRDTRGIFRVHQFEKVEQFCLTSPHENKSWEMFDEMIGNAENFYKSLGIPYRIVNI 365
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG LN+AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRY QTK+
Sbjct: 366 VSGELNNAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYSQTKKMGGQVSFVH 425
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+ AT CATTRVIC ILE +QTE G+ IPD L++++P N I FVK APID
Sbjct: 426 MLNATMCATTRVICVILENYQTEEGIIIPDVLKQYMPP---NLQDIIKFVKPAPID 478
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 140/170 (82%), Gaps = 3/170 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF LTSPH+++SW+ DEMI N+E FY LGI YR+VNIVSG LN
Sbjct: 312 DTRGIFRVHQFEKVEQFCLTSPHENKSWEMFDEMIGNAENFYKSLGIPYRIVNIVSGELN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRY QTKKM ++ FVHMLNAT
Sbjct: 372 NAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYSQTKKMGGQVSFVHMLNATM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CATTRVIC ILE +QTE G+ IPD L++++P N I FVK APID
Sbjct: 432 CATTRVICVILENYQTEEGIIIPDVLKQYMPP---NLQDIIKFVKPAPID 478
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + ++ L +VIGKG EK DS E +KYLIATSEQPI A HRD W+P A LP
Sbjct: 238 VAQLSQFDDELYKVIGKGSEKSEDSGYE-----EKYLIATSEQPIAAYHRDEWIPTADLP 292
Query: 563 IRYLGVSTCFRQEC 576
I+Y G STCFRQE
Sbjct: 293 IKYAGYSTCFRQEV 306
>gi|340369153|ref|XP_003383113.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Amphimedon
queenslandica]
Length = 499
Score = 328 bits (842), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 163/251 (64%), Positives = 187/251 (74%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VI K ++ D + +++KYLIATSEQPI A HR WL +LP+RY G+S+CFRQEV
Sbjct: 250 VISKSSEIVDDS----NVEEKYLIATSEQPIAAFHRGDWLDPQTLPLRYAGLSSCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQF+KVEQF LTSPHDD SWKM DEMI N+E FY LGI YRVVNIV
Sbjct: 306 GSHGRDTRGIFRVHQFQKVEQFCLTSPHDDVSWKMFDEMISNAEFFYQQLGIPYRVVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG LN AAA K DLE WFPGSGA+RELVSCSNCLDYQ+RRL VR+G TK+
Sbjct: 366 SGELNLAAAMKYDLEGWFPGSGAYRELVSCSNCLDYQARRLQVRFGLTKKMNAQADYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE GV +P+ LR+++P Y I FV+ APIDE TK
Sbjct: 426 LNATMCATTRTICAILENNQTEEGVVVPEILRQYMPPAY---KEFIKFVQAAPIDEPMTK 482
Query: 232 KQKKQKEGMKK 242
KQKKQ GMKK
Sbjct: 483 KQKKQMAGMKK 493
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVEQF LTSPHDD SWK DEMI N+E FY LGI YRVVNIVSG LN
Sbjct: 311 DTRGIFRVHQFQKVEQFCLTSPHDDVSWKMFDEMISNAEFFYQQLGIPYRVVNIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLE WFPGSGA+RELVSCSNCL YQ+RRL VR+G TKKMN + ++VHMLNAT
Sbjct: 371 LAAAMKYDLEGWFPGSGAYRELVSCSNCLDYQARRLQVRFGLTKKMNAQADYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE GV +P+ LR+++P Y I FV+ APIDE TKKQKKQ
Sbjct: 431 CATTRTICAILENNQTEEGVVVPEILRQYMPPAY---KEFIKFVQAAPIDEPMTKKQKKQ 487
Query: 483 KEGMKK 488
GMKK
Sbjct: 488 MAGMKK 493
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VI K ++ D + +++KYLIATSEQPI A HR WL +LP+
Sbjct: 237 VAQLSDFDEMLYKVISKSSEIVDDS----NVEEKYLIATSEQPIAAFHRGDWLDPQTLPL 292
Query: 564 RYLGVSTCFRQEC 576
RY G+S+CFRQE
Sbjct: 293 RYAGLSSCFRQEV 305
>gi|348523285|ref|XP_003449154.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Oreochromis
niloticus]
Length = 517
Score = 328 bits (841), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 188/242 (77%), Gaps = 18/242 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ +D+KYLIATSEQPI A R+ WL LPIRY G STCFRQE
Sbjct: 250 VIGKGSEKSDDSS-----IDEKYLIATSEQPIAAFLREEWLKPEDLPIRYAGFSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV SPHD +SW+MLDEMI +EEFY LGI YR+VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMLDEMIGTAEEFYQSLGIPYRIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 VSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRV+CAILE +QTE G+ +P+ LR+F+P L E I FVK APID+E +
Sbjct: 425 MLNATMCATTRVMCAILENYQTEEGIIVPETLREFMPP-GLTEI--IKFVKPAPIDQEMS 481
Query: 231 KK 232
KK
Sbjct: 482 KK 483
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/176 (72%), Positives = 145/176 (82%), Gaps = 3/176 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD +SW+ LDEMI +EEFY LGI YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDGKSWEMLDEMIGTAEEFYQSLGIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
CATTRV+CAILE +QTE G+ +P+ LR+F+P I FVK APID+E +KK
Sbjct: 431 CATTRVMCAILENYQTEEGIIVPETLREFMPPGLTE---IIKFVKPAPIDQEMSKK 483
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ +D+KYLIATSEQPI A R+ WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDDSS-----IDEKYLIATSEQPIAAFLREEWLKPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
IRY G STCFRQE
Sbjct: 292 IRYAGFSTCFRQEV 305
>gi|260814103|ref|XP_002601755.1| hypothetical protein BRAFLDRAFT_121181 [Branchiostoma floridae]
gi|229287057|gb|EEN57767.1| hypothetical protein BRAFLDRAFT_121181 [Branchiostoma floridae]
Length = 512
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/239 (68%), Positives = 182/239 (76%), Gaps = 19/239 (7%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + GD E D KYLIATSEQPI A HRD W+ LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKGDDQTE----DVKYLIATSEQPIAAYHRDEWMKPEELPIKYAGISTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVL+ P D+SW + EMI N+EEFY LGI YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKVEQFVLSKP--DDSWGLFHEMIGNAEEFYKTLGIPYRIVNIV 363
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAA K DLEAWFPGSGAFRELVSCSNCLDYQ+RRLLVRYGQTK+
Sbjct: 364 SGALNNAAAMKYDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNEKPEFVHM 423
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRVICAILE HQTE G+ IP+ LR+F+P IPFVK API+E+ T
Sbjct: 424 LNATMCATTRVICAILENHQTEEGIVIPEVLRQFMPGAIEF----IPFVKPAPIEEQAT 478
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 131/174 (75%), Positives = 143/174 (82%), Gaps = 6/174 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVL+ P D+SW EMI N+EEFY LGI YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKVEQFVLSKP--DDSWGLFHEMIGNAEEFYKTLGIPYRIVNIVSGALN 368
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFPGSGAFRELVSCSNCL YQ+RRLLVRYGQTKKMNEK EFVHMLNAT
Sbjct: 369 NAAAMKYDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNEKPEFVHMLNATM 428
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476
CATTRVICAILE HQTE G+ IP+ LR+F+P IPFVK API+E+ T
Sbjct: 429 CATTRVICAILENHQTEEGIVIPEVLRQFMPGAIEF----IPFVKPAPIEEQAT 478
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + ++ L +VIGKG + GD E D KYLIATSEQPI A HRD W+ LPI
Sbjct: 237 VAQLSQFDDELYKVIGKGSEKGDDQTE----DVKYLIATSEQPIAAYHRDEWMKPEELPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGISTCFRQEV 305
>gi|410898890|ref|XP_003962930.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Takifugu
rubripes]
Length = 515
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 185/242 (76%), Gaps = 18/242 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ +D+KYLIATSEQPI A RD WL LPIRY G STCFRQE
Sbjct: 250 VIGKGSEKSDDSS-----IDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYAGFSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV SPHD +SW+M DEMI +EEFY LGI YR+VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWQMFDEMIGTAEEFYQSLGIPYRIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 VSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRV+CAILE +QTE G+ IP+ LR F+P + E I FVK APID+E
Sbjct: 425 MLNATMCATTRVMCAILENYQTEEGIVIPEKLRDFMPP-GMTEI--IKFVKPAPIDQETA 481
Query: 231 KK 232
KK
Sbjct: 482 KK 483
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/176 (72%), Positives = 142/176 (80%), Gaps = 3/176 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD +SW+ DEMI +EEFY LGI YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDGKSWQMFDEMIGTAEEFYQSLGIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
CATTRV+CAILE +QTE G+ IP+ LR F+P I FVK APID+E KK
Sbjct: 431 CATTRVMCAILENYQTEEGIVIPEKLRDFMPPGMTE---IIKFVKPAPIDQETAKK 483
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ +D+KYLIATSEQPI A RD WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDDSS-----IDEKYLIATSEQPIAAFLRDEWLKPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
IRY G STCFRQE
Sbjct: 292 IRYAGFSTCFRQEV 305
>gi|432864517|ref|XP_004070332.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Oryzias latipes]
Length = 516
Score = 325 bits (833), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 162/241 (67%), Positives = 183/241 (75%), Gaps = 16/241 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + LD+KYLIATSEQPI A R+ WL LPIRY G STCFRQEV
Sbjct: 250 VIGKGSERSDDS----SLDEKYLIATSEQPIAAFLREEWLKPEDLPIRYAGFSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPHD +SW+M DEMI +EEFY LGI YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAEEFYQTLGIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKTEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRV+CAILE +QTE G+ +P+ LR F+P L E I FVK APID+E K
Sbjct: 426 LNATMCATTRVMCAILENYQTEEGIVVPEKLRDFMPP-GLTEI--IKFVKPAPIDQETAK 482
Query: 232 K 232
K
Sbjct: 483 K 483
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/176 (71%), Positives = 142/176 (80%), Gaps = 3/176 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD +SW+ DEMI +EEFY LGI YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAEEFYQTLGIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKTEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
CATTRV+CAILE +QTE G+ +P+ LR F+P I FVK APID+E KK
Sbjct: 431 CATTRVMCAILENYQTEEGIVVPEKLRDFMPPGLTE---IIKFVKPAPIDQETAKK 483
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + LD+KYLIATSEQPI A R+ WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSERSDDS----SLDEKYLIATSEQPIAAFLREEWLKPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
RY G STCFRQE
Sbjct: 293 RYAGFSTCFRQEV 305
>gi|225709734|gb|ACO10713.1| Seryl-tRNA synthetase, cytoplasmic [Caligus rogercresseyi]
Length = 503
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/254 (64%), Positives = 201/254 (79%), Gaps = 18/254 (7%)
Query: 1 VIGKGEKVGDSAPEKDE-LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V GKG S E+D+ +++KYLIATSEQPI A HR+ W+ E SLP++Y G+STCFRQE
Sbjct: 251 VTGKG-----SENEEDKSIEEKYLIATSEQPIAAFHREEWMNEKSLPVKYAGISTCFRQE 305
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEKVEQFV+TSPHD++SW+ DEMI N+E+FY LGI YR+V I
Sbjct: 306 VGSHGRDTRGIFRVHQFEKVEQFVITSPHDNKSWEAFDEMIGNAEKFYQVLGIPYRLVCI 365
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALN+AAAKK+DLEAWF G GAFRELVSCSNCLDYQ+RRL VRYGQTK+
Sbjct: 366 VSGALNNAAAKKIDLEAWFAGGGAFRELVSCSNCLDYQARRLRVRYGQTKKMNQATEYCH 425
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ T CA TRVICA++ETHQTET +++P+ ++ ++P Y + EIPF+ APIDE E+
Sbjct: 426 MLNGTMCAVTRVICALMETHQTETSIKVPEAIKAWMPEQYRD---EIPFIHPAPIDEAES 482
Query: 231 KKQKKQKEGMKKKL 244
KK KKQKEGM KK+
Sbjct: 483 KKSKKQKEGMNKKV 496
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/188 (70%), Positives = 157/188 (83%), Gaps = 3/188 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFV+TSPHD++SW+ DEMI N+E+FY LGI YR+V IVSGALN
Sbjct: 312 DTRGIFRVHQFEKVEQFVITSPHDNKSWEAFDEMIGNAEKFYQVLGIPYRLVCIVSGALN 371
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK+DLEAWF G GAFRELVSCSNCL YQ+RRL VRYGQTKKMN+ E+ HMLN T
Sbjct: 372 NAAAKKIDLEAWFAGGGAFRELVSCSNCLDYQARRLRVRYGQTKKMNQATEYCHMLNGTM 431
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA TRVICA++ETHQTET +++P+ ++ ++P Y + EIPF+ APIDE E+KK KKQ
Sbjct: 432 CAVTRVICALMETHQTETSIKVPEAIKAWMPEQYRD---EIPFIHPAPIDEAESKKSKKQ 488
Query: 483 KEGMKKKV 490
KEGM KKV
Sbjct: 489 KEGMNKKV 496
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 28/139 (20%)
Query: 486 MKKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDE-LDDKYLIATSE 544
M+K+V+++ +A + + L +V GKG S E+D+ +++KYLIATSE
Sbjct: 230 MRKEVMME----------VAQLSQFDEELYKVTGKG-----SENEEDKSIEEKYLIATSE 274
Query: 545 QPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY------FHVTCAQR 592
QPI A HR+ W+ E SLP++Y G+STCFRQE + G+ R + V +
Sbjct: 275 QPIAAFHREEWMNEKSLPVKYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVITSPH 334
Query: 593 EGLLSEATSEEVDQADPFY 611
+ EA E + A+ FY
Sbjct: 335 DNKSWEAFDEMIGNAEKFY 353
>gi|209489477|gb|ACI49235.1| hypothetical protein Csp3_JD06.001 [Caenorhabditis angaria]
Length = 486
Score = 322 bits (826), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/245 (63%), Positives = 187/245 (76%), Gaps = 18/245 (7%)
Query: 1 VIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V GKG ++ GD +D+KYLIATSEQPI A HR+ W+ E+ LP++Y GVSTCFRQE
Sbjct: 250 VSGKGSEIAGDQT-----IDEKYLIATSEQPIAAYHRNEWIKESDLPLKYAGVSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFVL +P+D+ESW + DEMI N+E +Y +L I Y +VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVLCNPNDNESWTLFDEMIGNAESYYQELEIPYHIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VS LN+AAAKK DLEAWFPGS AFRELVSCSNCLDYQ+RRL VRYGQTK+
Sbjct: 365 VSAELNNAAAKKFDLEAWFPGSAAFRELVSCSNCLDYQARRLRVRYGQTKKLDGDVQFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRVICAILE +QTETG+ +P +++++P Y IPFVK APIDEE+
Sbjct: 425 MLNATMCATTRVICAILENNQTETGINVPKAIQQWMPENYRT---HIPFVKPAPIDEEQK 481
Query: 231 KKQKK 235
KK K
Sbjct: 482 KKAGK 486
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 144/179 (80%), Gaps = 3/179 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFVL +P+D+ESW DEMI N+E +Y +L I Y +VNIVS LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVLCNPNDNESWTLFDEMIGNAESYYQELEIPYHIVNIVSAELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFPGS AFRELVSCSNCL YQ+RRL VRYGQTKK++ ++FVHMLNAT
Sbjct: 371 NAAAKKFDLEAWFPGSAAFRELVSCSNCLDYQARRLRVRYGQTKKLDGDVQFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
CATTRVICAILE +QTETG+ +P +++++P Y IPFVK APIDEE+ KK K
Sbjct: 431 CATTRVICAILENNQTETGINVPKAIQQWMPENY---RTHIPFVKPAPIDEEQKKKAGK 486
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + ++ L +V GKG ++ GD +D+KYLIATSEQPI A HR+ W+ E+ LP
Sbjct: 237 VAQLSQFDDELYKVSGKGSEIAGDQT-----IDEKYLIATSEQPIAAYHRNEWIKESDLP 291
Query: 563 IRYLGVSTCFRQEC 576
++Y GVSTCFRQE
Sbjct: 292 LKYAGVSTCFRQEV 305
>gi|47205013|emb|CAF89013.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 322 bits (826), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/241 (66%), Positives = 185/241 (76%), Gaps = 18/241 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ +D+KYLIATSEQPI A RD WL LPIRY G STCFRQE
Sbjct: 250 VIGKGSEKSEDSS-----IDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYAGFSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV SPHD +SW+M +EMI +EEFY LGI YR+VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWQMFEEMIGTAEEFYQSLGIPYRIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 VSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLHIRYGQTKKMMDKAEFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRV+CAILE +QTE G+ +P+ LR+F+P + I FVK API++E T
Sbjct: 425 MLNATMCATTRVMCAILENYQTEEGIVVPETLREFMPPGMTD---MIRFVKPAPIEQEAT 481
Query: 231 K 231
+
Sbjct: 482 R 482
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 144/175 (82%), Gaps = 3/175 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD +SW+ +EMI +EEFY LGI YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDGKSWQMFEEMIGTAEEFYQSLGIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLHIRYGQTKKMMDKAEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
CATTRV+CAILE +QTE G+ +P+ LR+F+P + I FVK API++E T+
Sbjct: 431 CATTRVMCAILENYQTEEGIVVPETLREFMPPGMTD---MIRFVKPAPIEQEATR 482
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ +D+KYLIATSEQPI A RD WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSEDSS-----IDEKYLIATSEQPIAAFLRDEWLKPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
IRY G STCFRQE
Sbjct: 292 IRYAGFSTCFRQEV 305
>gi|391345704|ref|XP_003747124.1| PREDICTED: probable serine--tRNA ligase, cytoplasmic-like isoform 1
[Metaseiulus occidentalis]
Length = 485
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/235 (66%), Positives = 181/235 (77%), Gaps = 16/235 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + D + E+D+KYLIATSEQPICA H+D WL A LPI+Y G+STCFRQEV
Sbjct: 248 VVGKGSEKAD----EKEVDEKYLIATSEQPICAFHKDEWLSPADLPIKYAGLSTCFRQEV 303
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV+TSP DDESWK DEMI N+E F L + YR+VNIV
Sbjct: 304 GSHGRDTRGIFRVHQFEKIEQFVITSPLDDESWKAFDEMIGNAEAFCQALNLPYRIVNIV 363
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKK DLEAWFP SGAFRELVSCSNCLDYQSRRL +RYGQTK+
Sbjct: 364 SGALNNAAAKKFDLEAWFPASGAFRELVSCSNCLDYQSRRLQIRYGQTKKMNEKTPYVHM 423
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+ AT CATTRVIC ILE Q E G+R+P+ LR ++P + +IPFVK APID
Sbjct: 424 LNATMCATTRVICCILENCQEEDGIRVPEALRPWMPEQFRE---KIPFVKPAPID 475
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 138/170 (81%), Gaps = 3/170 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV+TSP DDESWK DEMI N+E F L + YR+VNIVSGALN
Sbjct: 309 DTRGIFRVHQFEKIEQFVITSPLDDESWKAFDEMIGNAEAFCQALNLPYRIVNIVSGALN 368
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP SGAFRELVSCSNCL YQSRRL +RYGQTKKMNEK +VHMLNAT
Sbjct: 369 NAAAKKFDLEAWFPASGAFRELVSCSNCLDYQSRRLQIRYGQTKKMNEKTPYVHMLNATM 428
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CATTRVIC ILE Q E G+R+P+ LR ++P + +IPFVK APID
Sbjct: 429 CATTRVICCILENCQEEDGIRVPEALRPWMPEQFRE---KIPFVKPAPID 475
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + D + E+D+KYLIATSEQPICA H+D WL A LPI
Sbjct: 235 VAQLSQFDEELYKVVGKGSEKAD----EKEVDEKYLIATSEQPICAFHKDEWLSPADLPI 290
Query: 564 RYLGVSTCFRQE 575
+Y G+STCFRQE
Sbjct: 291 KYAGLSTCFRQE 302
>gi|391345706|ref|XP_003747125.1| PREDICTED: probable serine--tRNA ligase, cytoplasmic-like isoform 2
[Metaseiulus occidentalis]
Length = 492
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/235 (66%), Positives = 181/235 (77%), Gaps = 16/235 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + D + E+D+KYLIATSEQPICA H+D WL A LPI+Y G+STCFRQEV
Sbjct: 255 VVGKGSEKAD----EKEVDEKYLIATSEQPICAFHKDEWLSPADLPIKYAGLSTCFRQEV 310
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV+TSP DDESWK DEMI N+E F L + YR+VNIV
Sbjct: 311 GSHGRDTRGIFRVHQFEKIEQFVITSPLDDESWKAFDEMIGNAEAFCQALNLPYRIVNIV 370
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKK DLEAWFP SGAFRELVSCSNCLDYQSRRL +RYGQTK+
Sbjct: 371 SGALNNAAAKKFDLEAWFPASGAFRELVSCSNCLDYQSRRLQIRYGQTKKMNEKTPYVHM 430
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+ AT CATTRVIC ILE Q E G+R+P+ LR ++P + +IPFVK APID
Sbjct: 431 LNATMCATTRVICCILENCQEEDGIRVPEALRPWMPEQFRE---KIPFVKPAPID 482
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 138/170 (81%), Gaps = 3/170 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV+TSP DDESWK DEMI N+E F L + YR+VNIVSGALN
Sbjct: 316 DTRGIFRVHQFEKIEQFVITSPLDDESWKAFDEMIGNAEAFCQALNLPYRIVNIVSGALN 375
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP SGAFRELVSCSNCL YQSRRL +RYGQTKKMNEK +VHMLNAT
Sbjct: 376 NAAAKKFDLEAWFPASGAFRELVSCSNCLDYQSRRLQIRYGQTKKMNEKTPYVHMLNATM 435
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CATTRVIC ILE Q E G+R+P+ LR ++P + +IPFVK APID
Sbjct: 436 CATTRVICCILENCQEEDGIRVPEALRPWMPEQFRE---KIPFVKPAPID 482
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + D + E+D+KYLIATSEQPICA H+D WL A LPI
Sbjct: 242 VAQLSQFDEELYKVVGKGSEKAD----EKEVDEKYLIATSEQPICAFHKDEWLSPADLPI 297
Query: 564 RYLGVSTCFRQE 575
+Y G+STCFRQE
Sbjct: 298 KYAGLSTCFRQE 309
>gi|47498044|ref|NP_998852.1| seryl-tRNA synthetase [Xenopus (Silurana) tropicalis]
gi|45708834|gb|AAH67920.1| seryl-aminoacyl-tRNA synthetase 1 [Xenopus (Silurana) tropicalis]
gi|89269852|emb|CAJ83597.1| seryl-tRNA synthetase [Xenopus (Silurana) tropicalis]
Length = 511
Score = 320 bits (820), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/239 (65%), Positives = 184/239 (76%), Gaps = 16/239 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + +D+KYLIATSEQPI A+HRD WL LP+RY G+STCFRQEV
Sbjct: 249 VIGKGSEKSDD----NSIDEKYLIATSEQPIAALHRDEWLKPEELPLRYAGISTCFRQEV 304
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQF+ SP+D++SW++ +EMI +E FY LGI YR+VNIV
Sbjct: 305 GSHGRDTRGIFRVHQFEKIEQFIYASPNDNKSWELFEEMIMTAESFYQKLGIPYRIVNIV 364
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 424
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTR ICAILE +QTE G+ IP+ LR F+P LN I FVK APID+E T
Sbjct: 425 LNATMCATTRAICAILENYQTEEGIIIPEKLRDFMPP-GLNYI--IKFVKPAPIDQELT 480
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 143/176 (81%), Gaps = 7/176 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQF+ SP+D++SW+ +EMI +E FY LGI YR+VNIVSG+LN
Sbjct: 310 DTRGIFRVHQFEKIEQFIYASPNDNKSWELFEEMIMTAESFYQKLGIPYRIVNIVSGSLN 369
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 370 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 429
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPA--VYVNEAGEIPFVKTAPIDEEET 476
CATTR ICAILE +QTE G+ IP+ LR F+P Y+ I FVK APID+E T
Sbjct: 430 CATTRAICAILENYQTEEGIIIPEKLRDFMPPGLNYI-----IKFVKPAPIDQELT 480
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + +D+KYLIATSEQPI A+HRD WL LP+
Sbjct: 236 VAQLSQFDEELYKVIGKGSEKSDD----NSIDEKYLIATSEQPIAALHRDEWLKPEELPL 291
Query: 564 RYLGVSTCFRQEC 576
RY G+STCFRQE
Sbjct: 292 RYAGISTCFRQEV 304
>gi|17539260|ref|NP_501804.1| Protein SARS-1 [Caenorhabditis elegans]
gi|2501055|sp|Q18678.1|SYSC_CAEEL RecName: Full=Probable serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|3875110|emb|CAA93105.1| Protein SARS-1 [Caenorhabditis elegans]
Length = 487
Score = 320 bits (820), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 188/246 (76%), Gaps = 18/246 (7%)
Query: 1 VIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V KG ++ GD++ +D+KYLIATSEQPI A HR+ W+ E LPI+Y GVSTCFRQE
Sbjct: 250 VSSKGSEIAGDTS-----VDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFVL SP+D+ESW + DEMI N+E +Y +L I Y+VVNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG LN+AAAKK DLEAWFPGSGA+RELVSCSNCLDYQSRRL VRYGQTK+
Sbjct: 365 VSGELNNAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEVPFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRVICAILE +QTE G+ +P +++++P Y IPFVK APIDE+
Sbjct: 425 MLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPENYRT---FIPFVKPAPIDEDAK 481
Query: 231 KKQKKQ 236
K K+
Sbjct: 482 KATGKK 487
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 145/180 (80%), Gaps = 3/180 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFVL SP+D+ESW DEMI N+E +Y +L I Y+VVNIVSG LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFPGSGA+RELVSCSNCL YQSRRL VRYGQTKK++ ++ FVHMLNAT
Sbjct: 371 NAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEVPFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE +QTE G+ +P +++++P Y IPFVK APIDE+ K K+
Sbjct: 431 CATTRVICAILENNQTEEGINVPTAIQQWMPENYRT---FIPFVKPAPIDEDAKKATGKK 487
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + ++ L +V KG ++ GD++ +D+KYLIATSEQPI A HR+ W+ E LP
Sbjct: 237 VAQLSQFDDELYKVSSKGSEIAGDTS-----VDEKYLIATSEQPIAAYHRNEWIKETELP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y GVSTCFRQE
Sbjct: 292 IKYAGVSTCFRQEV 305
>gi|391345708|ref|XP_003747126.1| PREDICTED: probable serine--tRNA ligase, cytoplasmic-like isoform 3
[Metaseiulus occidentalis]
Length = 437
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/235 (66%), Positives = 181/235 (77%), Gaps = 16/235 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + D + E+D+KYLIATSEQPICA H+D WL A LPI+Y G+STCFRQEV
Sbjct: 200 VVGKGSEKAD----EKEVDEKYLIATSEQPICAFHKDEWLSPADLPIKYAGLSTCFRQEV 255
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV+TSP DDESWK DEMI N+E F L + YR+VNIV
Sbjct: 256 GSHGRDTRGIFRVHQFEKIEQFVITSPLDDESWKAFDEMIGNAEAFCQALNLPYRIVNIV 315
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKK DLEAWFP SGAFRELVSCSNCLDYQSRRL +RYGQTK+
Sbjct: 316 SGALNNAAAKKFDLEAWFPASGAFRELVSCSNCLDYQSRRLQIRYGQTKKMNEKTPYVHM 375
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+ AT CATTRVIC ILE Q E G+R+P+ LR ++P + +IPFVK APID
Sbjct: 376 LNATMCATTRVICCILENCQEEDGIRVPEALRPWMPEQFRE---KIPFVKPAPID 427
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 138/170 (81%), Gaps = 3/170 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV+TSP DDESWK DEMI N+E F L + YR+VNIVSGALN
Sbjct: 261 DTRGIFRVHQFEKIEQFVITSPLDDESWKAFDEMIGNAEAFCQALNLPYRIVNIVSGALN 320
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP SGAFRELVSCSNCL YQSRRL +RYGQTKKMNEK +VHMLNAT
Sbjct: 321 NAAAKKFDLEAWFPASGAFRELVSCSNCLDYQSRRLQIRYGQTKKMNEKTPYVHMLNATM 380
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CATTRVIC ILE Q E G+R+P+ LR ++P + +IPFVK APID
Sbjct: 381 CATTRVICCILENCQEEDGIRVPEALRPWMPEQFRE---KIPFVKPAPID 427
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 4/62 (6%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +V+GKG + D + E+D+KYLIATSEQPICA H+D WL A LPI+Y G+STCFR
Sbjct: 197 LYKVVGKGSEKAD----EKEVDEKYLIATSEQPICAFHKDEWLSPADLPIKYAGLSTCFR 252
Query: 574 QE 575
QE
Sbjct: 253 QE 254
>gi|393908510|gb|EFO21667.2| seryl-tRNA synthetase [Loa loa]
Length = 484
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 185/241 (76%), Gaps = 18/241 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V GKG E +GD D+KYLIATSEQPI A HR+ W+ EA LPI+Y G+S+CFRQE
Sbjct: 250 VTGKGSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLPIKYAGISSCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEKVEQFVL SPHDDESWKMLDEM++N+E+F LGI +R+V I
Sbjct: 305 VGSHGRDTRGIFRVHQFEKVEQFVLCSPHDDESWKMLDEMVENAEDFCKALGIPFRIVCI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG LN+AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYG+TK+
Sbjct: 365 VSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGEVSYVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ T CATTRV+CA+LE +Q E G+R+P+ LR+F+P Y IPF+K API+ +
Sbjct: 425 MLNGTMCATTRVLCALLENYQEENGIRVPEILRQFMPYPY---KELIPFIKEAPIENDLK 481
Query: 231 K 231
K
Sbjct: 482 K 482
Score = 253 bits (647), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 143/175 (81%), Gaps = 3/175 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVL SPHDDESWK LDEM++N+E+F LGI +R+V IVSG LN
Sbjct: 311 DTRGIFRVHQFEKVEQFVLCSPHDDESWKMLDEMVENAEDFCKALGIPFRIVCIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFPGS AFRELVSCSNC YQ+RRL +RYG+TKK++ ++ +VHMLN T
Sbjct: 371 NAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGEVSYVHMLNGTM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
CATTRV+CA+LE +Q E G+R+P+ LR+F+P Y IPF+K API+ + K
Sbjct: 431 CATTRVLCALLENYQEENGIRVPEILRQFMPYPY---KELIPFIKEAPIENDLKK 482
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +V GKG E +GD D+KYLIATSEQPI A HR+ W+ EA LP
Sbjct: 237 VAQLSQFDQELYKVTGKGSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y G+S+CFRQE
Sbjct: 292 IKYAGISSCFRQEV 305
>gi|312079977|ref|XP_003142404.1| Sars1 protein [Loa loa]
Length = 484
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 155/241 (64%), Positives = 185/241 (76%), Gaps = 18/241 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V GKG E +GD D+KYLIATSEQPI A HR+ W+ EA LPI+Y G+S+CFRQE
Sbjct: 250 VTGKGSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLPIKYAGISSCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEKVEQFVL SPHDDESWKMLDEM++N+E+F LGI +R+V I
Sbjct: 305 VGSHGRDTRGIFRVHQFEKVEQFVLCSPHDDESWKMLDEMVENAEDFCKALGIPFRIVCI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG LN+AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYG+TK+
Sbjct: 365 VSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGEVSYVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ T CATTRV+CA+LE +Q E G+R+P+ LR+F+P Y IPF+K API+ +
Sbjct: 425 MLNGTMCATTRVLCALLENYQEENGIRVPEILRQFMPYPY---KELIPFIKEAPIENDLK 481
Query: 231 K 231
K
Sbjct: 482 K 482
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 143/175 (81%), Gaps = 3/175 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVL SPHDDESWK LDEM++N+E+F LGI +R+V IVSG LN
Sbjct: 311 DTRGIFRVHQFEKVEQFVLCSPHDDESWKMLDEMVENAEDFCKALGIPFRIVCIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFPGS AFRELVSCSNC YQ+RRL +RYG+TKK++ ++ +VHMLN T
Sbjct: 371 NAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGEVSYVHMLNGTM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
CATTRV+CA+LE +Q E G+R+P+ LR+F+P Y IPF+K API+ + K
Sbjct: 431 CATTRVLCALLENYQEENGIRVPEILRQFMPYPY---KELIPFIKEAPIENDLKK 482
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +V GKG E +GD D+KYLIATSEQPI A HR+ W+ EA LP
Sbjct: 237 VAQLSQFDQELYKVTGKGSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y G+S+CFRQE
Sbjct: 292 IKYAGISSCFRQEV 305
>gi|341881920|gb|EGT37855.1| CBN-SARS-2 protein [Caenorhabditis brenneri]
Length = 487
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 152/237 (64%), Positives = 181/237 (76%), Gaps = 12/237 (5%)
Query: 9 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTR 68
G P +D+KYLIATSEQPI A HR+ W+ E+ LPI+Y GVSTCFRQEVGSHGRDTR
Sbjct: 254 GSENPGDTSVDEKYLIATSEQPIAAYHRNEWIKESDLPIKYAGVSTCFRQEVGSHGRDTR 313
Query: 69 GIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 128
GIFRVHQFEK+EQFVL SP+D+ESW + DEMI N+E +Y +L I Y+VVNIVSG LN+AA
Sbjct: 314 GIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELNNAA 373
Query: 129 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACAT 179
+KK DLEAWFPGS A+RELVSCSNCLDYQSRRL VRYGQTK+ + AT CAT
Sbjct: 374 SKKFDLEAWFPGSKAYRELVSCSNCLDYQSRRLKVRYGQTKKLNGEVPFVHMLNATMCAT 433
Query: 180 TRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
TRVICAILE +QTETG+ +P +++++P Y IPF K APIDE+ K K+
Sbjct: 434 TRVICAILENNQTETGINVPTAIQQWMPEKYRT---FIPFTKPAPIDEDAKKAAGKK 487
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/180 (67%), Positives = 144/180 (80%), Gaps = 3/180 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFVL SP+D+ESW DEMI N+E +Y +L I Y+VVNIVSG LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFPGS A+RELVSCSNCL YQSRRL VRYGQTKK+N ++ FVHMLNAT
Sbjct: 371 NAASKKFDLEAWFPGSKAYRELVSCSNCLDYQSRRLKVRYGQTKKLNGEVPFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE +QTETG+ +P +++++P Y IPF K APIDE+ K K+
Sbjct: 431 CATTRVICAILENNQTETGINVPTAIQQWMPEKY---RTFIPFTKPAPIDEDAKKAAGKK 487
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 525 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
G P +D+KYLIATSEQPI A HR+ W+ E+ LPI+Y GVSTCFRQE
Sbjct: 254 GSENPGDTSVDEKYLIATSEQPIAAYHRNEWIKESDLPIKYAGVSTCFRQEV 305
>gi|341901369|gb|EGT57304.1| hypothetical protein CAEBREN_18983 [Caenorhabditis brenneri]
Length = 487
Score = 318 bits (816), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/237 (64%), Positives = 181/237 (76%), Gaps = 12/237 (5%)
Query: 9 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTR 68
G P +D+KYLIATSEQPI A HR+ W+ E+ LPI+Y GVSTCFRQEVGSHGRDTR
Sbjct: 254 GSENPGDTSVDEKYLIATSEQPIAAYHRNEWIKESDLPIKYAGVSTCFRQEVGSHGRDTR 313
Query: 69 GIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 128
GIFRVHQFEK+EQFVL SP+D+ESW + DEMI N+E +Y +L I Y+VVNIVSG LN+AA
Sbjct: 314 GIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELNNAA 373
Query: 129 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACAT 179
+KK DLEAWFPGS A+RELVSCSNCLDYQSRRL VRYGQTK+ + AT CAT
Sbjct: 374 SKKFDLEAWFPGSKAYRELVSCSNCLDYQSRRLKVRYGQTKKLNGEVPFVHMLNATMCAT 433
Query: 180 TRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
TRVICAILE +QTETG+ +P +++++P Y IPF K APIDE+ K K+
Sbjct: 434 TRVICAILENNQTETGINVPTAIQQWMPEKYRT---FIPFTKPAPIDEDAKKAAGKK 487
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/180 (67%), Positives = 144/180 (80%), Gaps = 3/180 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFVL SP+D+ESW DEMI N+E +Y +L I Y+VVNIVSG LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFPGS A+RELVSCSNCL YQSRRL VRYGQTKK+N ++ FVHMLNAT
Sbjct: 371 NAASKKFDLEAWFPGSKAYRELVSCSNCLDYQSRRLKVRYGQTKKLNGEVPFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE +QTETG+ +P +++++P Y IPF K APIDE+ K K+
Sbjct: 431 CATTRVICAILENNQTETGINVPTAIQQWMPEKY---RTFIPFTKPAPIDEDAKKAAGKK 487
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 525 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
G P +D+KYLIATSEQPI A HR+ W+ E+ LPI+Y GVSTCFRQE
Sbjct: 254 GSENPGDTSVDEKYLIATSEQPIAAYHRNEWIKESDLPIKYAGVSTCFRQEV 305
>gi|196006439|ref|XP_002113086.1| hypothetical protein TRIADDRAFT_25588 [Trichoplax adhaerens]
gi|190585127|gb|EDV25196.1| hypothetical protein TRIADDRAFT_25588 [Trichoplax adhaerens]
Length = 491
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/247 (63%), Positives = 190/247 (76%), Gaps = 19/247 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG E V DS+ +D+KYLIATSEQPI A HR W+ + LP +Y GVSTCFRQE
Sbjct: 250 VIGKGSENVDDSS-----IDEKYLIATSEQPIAAYHRAEWINPSELPKKYAGVSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFVL SP+D+ESWK+++EMI+N+ ++Y LGI+YR+VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWKLMEEMIENASDYYQSLGISYRIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALN+AA+KKLDLEAWFPGSGAFRELVSCSNC DYQSRRL +R+GQTK+
Sbjct: 365 VSGALNNAASKKLDLEAWFPGSGAFRELVSCSNCTDYQSRRLQIRFGQTKKMNAQAEYVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ +T CATTR ICAILET QTETG+ +P+ L +++P + I F K P D+ T
Sbjct: 425 MLNSTMCATTRAICAILETFQTETGIAVPEVLHQYLPP----DCAFIEFTKPVPTDKLTT 480
Query: 231 KKQKKQK 237
K+ KK K
Sbjct: 481 KELKKTK 487
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/181 (66%), Positives = 148/181 (81%), Gaps = 4/181 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFVL SP+D+ESWK ++EMI+N+ ++Y LGI+YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFVLCSPNDNESWKLMEEMIENASDYYQSLGISYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFPGSGAFRELVSCSNC YQSRRL +R+GQTKKMN + E+VHMLN+T
Sbjct: 371 NAASKKLDLEAWFPGSGAFRELVSCSNCTDYQSRRLQIRFGQTKKMNAQAEYVHMLNSTM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILET QTETG+ +P+ L +++P + I F K P D+ TK+ KK
Sbjct: 431 CATTRAICAILETFQTETGIAVPEVLHQYLPP----DCAFIEFTKPVPTDKLTTKELKKT 486
Query: 483 K 483
K
Sbjct: 487 K 487
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 6/63 (9%)
Query: 514 LREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 572
L +VIGKG E V DS+ +D+KYLIATSEQPI A HR W+ + LP +Y GVSTCF
Sbjct: 247 LYKVIGKGSENVDDSS-----IDEKYLIATSEQPIAAYHRAEWINPSELPKKYAGVSTCF 301
Query: 573 RQE 575
RQE
Sbjct: 302 RQE 304
>gi|308481089|ref|XP_003102750.1| CRE-SARS-2 protein [Caenorhabditis remanei]
gi|308260836|gb|EFP04789.1| CRE-SARS-2 protein [Caenorhabditis remanei]
Length = 487
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/246 (64%), Positives = 185/246 (75%), Gaps = 18/246 (7%)
Query: 1 VIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V KG +V GD++ +D+KYLIATSEQPI A HR+ W+ E LPI+Y GVSTCFRQE
Sbjct: 250 VSSKGSEVAGDTS-----IDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFVL SP+D+ESWK+ DEMI N+E +Y +L I Y VVNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWKLFDEMIGNAESYYQELQIPYHVVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG LN+AAAKK DLEAWFPGSGA RELVSCSNCLDYQSRRL VRYGQTK+
Sbjct: 365 VSGELNNAAAKKFDLEAWFPGSGAMRELVSCSNCLDYQSRRLKVRYGQTKKLNGEVPFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRVICAILE +QTE G+ +P +++++P Y IPFVK APID +
Sbjct: 425 MLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPENYRT---FIPFVKPAPIDVDAK 481
Query: 231 KKQKKQ 236
K K
Sbjct: 482 KAAAKN 487
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/180 (68%), Positives = 142/180 (78%), Gaps = 3/180 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFVL SP+D+ESWK DEMI N+E +Y +L I Y VVNIVSG LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVLCSPNDNESWKLFDEMIGNAESYYQELQIPYHVVNIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFPGSGA RELVSCSNCL YQSRRL VRYGQTKK+N ++ FVHMLNAT
Sbjct: 371 NAAAKKFDLEAWFPGSGAMRELVSCSNCLDYQSRRLKVRYGQTKKLNGEVPFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE +QTE G+ +P +++++P Y IPFVK APID + K K
Sbjct: 431 CATTRVICAILENNQTEEGINVPTAIQQWMPENY---RTFIPFVKPAPIDVDAKKAAAKN 487
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + ++ L +V KG +V GD++ +D+KYLIATSEQPI A HR+ W+ E LP
Sbjct: 237 VAQLSQFDDELYKVSSKGSEVAGDTS-----IDEKYLIATSEQPIAAYHRNEWIKETELP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y GVSTCFRQE
Sbjct: 292 IKYAGVSTCFRQEV 305
>gi|324508480|gb|ADY43578.1| Seryl-tRNA synthetase [Ascaris suum]
Length = 485
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/240 (65%), Positives = 181/240 (75%), Gaps = 16/240 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V GKG +V + +D+KYLIATSEQPI A HR+ WL + LP++Y G+STCFRQEV
Sbjct: 250 VTGKGSEV----VTDESIDEKYLIATSEQPIAAFHRNEWLNPSELPLKYAGISTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEKVEQFVL SPHD SWKM DEMI N+EEF L + YR+V IV
Sbjct: 306 GSHGRDTRGIFRVHQFEKVEQFVLCSPHDGISWKMFDEMIANAEEFCQMLELPYRIVCIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG LN+AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL VR+GQTK+
Sbjct: 366 SGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKVRFGQTKKMDGEVPFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRV+CAILE Q E G+R+P L+ F+PAVY A +IPF+K APID + K
Sbjct: 426 LNATMCATTRVLCAILENFQEEDGIRVPKALKPFMPAVY---AEKIPFIKPAPIDTDMKK 482
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 140/175 (80%), Gaps = 3/175 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFVL SPHD SWK DEMI N+EEF L + YR+V IVSG LN
Sbjct: 311 DTRGIFRVHQFEKVEQFVLCSPHDGISWKMFDEMIANAEEFCQMLELPYRIVCIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFPGS AFRELVSCSNC YQ+RRL VR+GQTKKM+ ++ FVHMLNAT
Sbjct: 371 NAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKVRFGQTKKMDGEVPFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
CATTRV+CAILE Q E G+R+P L+ F+PAVY A +IPF+K APID + K
Sbjct: 431 CATTRVLCAILENFQEEDGIRVPKALKPFMPAVY---AEKIPFIKPAPIDTDMKK 482
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 16/119 (13%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V GKG +V + +D+KYLIATSEQPI A HR+ WL + LP+
Sbjct: 237 VAQLSQFDEELYKVTGKGSEV----VTDESIDEKYLIATSEQPIAAFHRNEWLNPSELPL 292
Query: 564 RYLGVSTCFRQECDA------GMCRTY------FHVTCAQREGLLSEATSEEVDQADPF 610
+Y G+STCFRQE + G+ R + V C+ +G+ + E + A+ F
Sbjct: 293 KYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLCSPHDGISWKMFDEMIANAEEF 351
>gi|268537226|ref|XP_002633749.1| C. briggsae CBR-SRS-2 protein [Caenorhabditis briggsae]
Length = 487
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/245 (64%), Positives = 183/245 (74%), Gaps = 18/245 (7%)
Query: 1 VIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V KG +V GD+ +D+KYLIATSEQPI A HR+ W+ E LPI+Y GVSTCFRQE
Sbjct: 250 VSSKGSEVAGDTT-----VDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFVL SP+D+ESW + DEMI N+E +Y +L I Y VVNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYHVVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG LN+AAAKK DLEAWFPGSGA RELVSCSNCLDYQSRRL VRYGQTK+
Sbjct: 365 VSGELNNAAAKKFDLEAWFPGSGAMRELVSCSNCLDYQSRRLKVRYGQTKKLNGEVPFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRVICAILE +QTE G+ +P +++++P Y IPFVK APID +
Sbjct: 425 MLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPEQYRT---FIPFVKPAPIDVDAK 481
Query: 231 KKQKK 235
K K
Sbjct: 482 KAAAK 486
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 141/179 (78%), Gaps = 3/179 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFVL SP+D+ESW DEMI N+E +Y +L I Y VVNIVSG LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYHVVNIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFPGSGA RELVSCSNCL YQSRRL VRYGQTKK+N ++ FVHMLNAT
Sbjct: 371 NAAAKKFDLEAWFPGSGAMRELVSCSNCLDYQSRRLKVRYGQTKKLNGEVPFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
CATTRVICAILE +QTE G+ +P +++++P Y IPFVK APID + K K
Sbjct: 431 CATTRVICAILENNQTEEGINVPTAIQQWMPEQY---RTFIPFVKPAPIDVDAKKAAAK 486
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + ++ L +V KG +V GD+ +D+KYLIATSEQPI A HR+ W+ E LP
Sbjct: 237 VAQLSQFDDELYKVSSKGSEVAGDTT-----VDEKYLIATSEQPIAAYHRNEWIKETELP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y GVSTCFRQE
Sbjct: 292 IKYAGVSTCFRQEV 305
>gi|51468022|ref|NP_001003882.1| seryl-tRNA synthetase, cytoplasmic [Danio rerio]
gi|49619145|gb|AAT68157.1| seryl-tRNA synthetase [Danio rerio]
gi|51980615|gb|AAH81608.1| Seryl-tRNA synthetase [Danio rerio]
gi|260763742|dbj|BAI44434.1| seryl-tRNA synthetase [Danio rerio]
Length = 515
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/235 (66%), Positives = 177/235 (75%), Gaps = 16/235 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + +D+KYLIATSEQPI A RD WL LPIRY G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NTVDEKYLIATSEQPIAAFLRDEWLKPEELPIRYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPHD +SW+M DEMI +E FY LGI YR+VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAESFYQTLGIPYRIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALNHAA+KKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+ AT CATTRVICAILE QTE G+ +P+ L+ F+P L E I FVK APID
Sbjct: 426 LNATMCATTRVICAILENFQTEEGIIVPEPLKAFMPP-GLTEI--IKFVKPAPID 477
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 135/170 (79%), Gaps = 3/170 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD +SW+ DEMI +E FY LGI YR+VNIVSGALN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAESFYQTLGIPYRIVNIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGS AFRELVSCSNC YQ+RRL +RYGQTKKM +K EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CATTRVICAILE QTE G+ +P+ L+ F+P I FVK APID
Sbjct: 431 CATTRVICAILENFQTEEGIIVPEPLKAFMPPGLTE---IIKFVKPAPID 477
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + +D+KYLIATSEQPI A RD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NTVDEKYLIATSEQPIAAFLRDEWLKPEELPI 292
Query: 564 RYLGVSTCFRQEC 576
RY G+STCFRQE
Sbjct: 293 RYAGLSTCFRQEV 305
>gi|340369155|ref|XP_003383114.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Amphimedon
queenslandica]
Length = 499
Score = 312 bits (800), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 157/251 (62%), Positives = 183/251 (72%), Gaps = 16/251 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGK ++ D + +++KYLIATSEQPI A HR WL +LP++Y G+S+CFRQEV
Sbjct: 250 VIGKSSEIVDDS----NVEEKYLIATSEQPIAAFHRGDWLDPQTLPLKYAGLSSCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
SHGRDTRGIFRVHQF+KVEQF LTSPHDD SWKM DEMI N+E FY LGI YRVVNIV
Sbjct: 306 DSHGRDTRGIFRVHQFQKVEQFCLTSPHDDVSWKMFDEMISNAEFFYQQLGIPYRVVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG LN AAA K DLE FPGSGA+RELVSCSNCLDYQ RRL VR+G TK+
Sbjct: 366 SGELNLAAAMKYDLEGLFPGSGAYRELVSCSNCLDYQVRRLQVRFGLTKKMNAQADYVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE GV +P+ LR+++P Y I FV+ API E TK
Sbjct: 426 LNATMCATTRTICAILENNQTEEGVVVPEILRQYMPPAY---KEFIKFVQAAPIHEPITK 482
Query: 232 KQKKQKEGMKK 242
KQ+ Q GM+K
Sbjct: 483 KQENQMAGMEK 493
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 143/186 (76%), Gaps = 3/186 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVEQF LTSPHDD SWK DEMI N+E FY LGI YRVVNIVSG LN
Sbjct: 311 DTRGIFRVHQFQKVEQFCLTSPHDDVSWKMFDEMISNAEFFYQQLGIPYRVVNIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLE FPGSGA+RELVSCSNCL YQ RRL VR+G TKKMN + ++VHMLNAT
Sbjct: 371 LAAAMKYDLEGLFPGSGAYRELVSCSNCLDYQVRRLQVRFGLTKKMNAQADYVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE GV +P+ LR+++P Y I FV+ API E TKKQ+ Q
Sbjct: 431 CATTRTICAILENNQTEEGVVVPEILRQYMPPAY---KEFIKFVQAAPIHEPITKKQENQ 487
Query: 483 KEGMKK 488
GM+K
Sbjct: 488 MAGMEK 493
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 14/93 (15%)
Query: 486 MKKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQ 545
MKK+V+ + A + + +++ L +VIGK ++ D + +++KYLIATSEQ
Sbjct: 229 MKKEVMQEVAHLSDYEEM----------LYKVIGKSSEIVDDS----NVEEKYLIATSEQ 274
Query: 546 PICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
PI A HR WL +LP++Y G+S+CFRQE D+
Sbjct: 275 PIAAFHRGDWLDPQTLPLKYAGLSSCFRQEVDS 307
>gi|339235125|ref|XP_003379117.1| seryl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
gi|316978241|gb|EFV61250.1| seryl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
Length = 494
Score = 309 bits (792), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/224 (66%), Positives = 171/224 (76%), Gaps = 12/224 (5%)
Query: 21 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVE 80
KYLIATSEQPI A HRD W+ + SLP+RY+G STCFRQEVGSHGRDT GIFRVHQFEKVE
Sbjct: 266 KYLIATSEQPIAAYHRDEWISKESLPLRYVGFSTCFRQEVGSHGRDTSGIFRVHQFEKVE 325
Query: 81 QFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPG 140
QF +TSPHDD SW+ML+EMI N+E FY L I YRVV+IVSG LN+AAAKK DLEAWFPG
Sbjct: 326 QFCITSPHDDASWEMLEEMISNAEMFYQTLNIPYRVVSIVSGELNNAAAKKYDLEAWFPG 385
Query: 141 SGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATTRVICAILETHQ 191
SGAFRELVSCSNC DYQSRRL +RYGQTK+ + T CATTR ICAILE Q
Sbjct: 386 SGAFRELVSCSNCTDYQSRRLRIRYGQTKKMMAKAEFVHMLNGTMCATTRTICAILENFQ 445
Query: 192 TETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
E G+ +P+ LR+++P Y + IPFVK AP E+ K+ K
Sbjct: 446 EENGIAVPEALRQYMPDDYKD---FIPFVKPAPKVEQAAKRGSK 486
Score = 253 bits (645), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 138/179 (77%), Gaps = 3/179 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +TSPHDD SW+ L+EMI N+E FY L I YRVV+IVSG LN
Sbjct: 311 DTSGIFRVHQFEKVEQFCITSPHDDASWEMLEEMISNAEMFYQTLNIPYRVVSIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFPGSGAFRELVSCSNC YQSRRL +RYGQTKKM K EFVHMLN T
Sbjct: 371 NAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQSRRLRIRYGQTKKMMAKAEFVHMLNGTM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
CATTR ICAILE Q E G+ +P+ LR+++P Y + IPFVK AP E+ K+ K
Sbjct: 431 CATTRTICAILENFQEENGIAVPEALRQYMPDDYKD---FIPFVKPAPKVEQAAKRGSK 486
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 537 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
KYLIATSEQPI A HRD W+ + SLP+RY+G STCFRQE +
Sbjct: 266 KYLIATSEQPIAAYHRDEWISKESLPLRYVGFSTCFRQEVGS 307
>gi|170589916|ref|XP_001899719.1| Sars1 protein [Brugia malayi]
gi|158592845|gb|EDP31441.1| Sars1 protein, putative [Brugia malayi]
Length = 432
Score = 308 bits (790), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 149/241 (61%), Positives = 184/241 (76%), Gaps = 18/241 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V GK E +GD D+KYLIATSEQPI A HR+ W+ EA LPI+Y G+S+CFRQE
Sbjct: 198 VTGKSSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLPIKYAGISSCFRQE 252
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRG+FRVHQFEKVEQFV+ SP+DDESW++LDEM++N+E+F LGI +R+V I
Sbjct: 253 VGSHGRDTRGMFRVHQFEKVEQFVICSPYDDESWRILDEMVENAEDFCKALGIPFRIVCI 312
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG LN+AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYG+TK+
Sbjct: 313 VSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGEVSYVH 372
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ T CATTRV+CA+LE +Q E G+R+P+ LR+F+P Y IPF+K API+ +
Sbjct: 373 MLNGTMCATTRVLCALLENYQEENGIRVPEILRQFMPHPY---KELIPFIKEAPIENDLK 429
Query: 231 K 231
K
Sbjct: 430 K 430
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 143/175 (81%), Gaps = 3/175 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+FRVHQFEKVEQFV+ SP+DDESW+ LDEM++N+E+F LGI +R+V IVSG LN
Sbjct: 259 DTRGMFRVHQFEKVEQFVICSPYDDESWRILDEMVENAEDFCKALGIPFRIVCIVSGELN 318
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFPGS AFRELVSCSNC YQ+RRL +RYG+TKK++ ++ +VHMLN T
Sbjct: 319 NAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGEVSYVHMLNGTM 378
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
CATTRV+CA+LE +Q E G+R+P+ LR+F+P Y IPF+K API+ + K
Sbjct: 379 CATTRVLCALLENYQEENGIRVPEILRQFMPHPY---KELIPFIKEAPIENDLKK 430
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +V GK E +GD D+KYLIATSEQPI A HR+ W+ EA LP
Sbjct: 185 VAQLNQFDQELYKVTGKSSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLP 239
Query: 563 IRYLGVSTCFRQECDA------GMCRTY 584
I+Y G+S+CFRQE + GM R +
Sbjct: 240 IKYAGISSCFRQEVGSHGRDTRGMFRVH 267
>gi|449677187|ref|XP_002157171.2| PREDICTED: serine--tRNA ligase, cytoplasmic-like [Hydra
magnipapillata]
Length = 450
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/251 (60%), Positives = 184/251 (73%), Gaps = 18/251 (7%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + D +++KYLIATSEQPI A HR W+ + LP +Y G+S+CFRQEV
Sbjct: 197 VVGKGSERDDDTA----VEEKYLIATSEQPIAAFHRGEWMSTSDLPKKYAGISSCFRQEV 252
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
G HGRDTRGIFRVHQFEKVEQFV+ SPHD+ESWK LDEM+ N+E+FY L I YR+V IV
Sbjct: 253 GCHGRDTRGIFRVHQFEKVEQFVICSPHDNESWKHLDEMVNNAEKFYQALNIPYRIVGIV 312
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKKLDLEAWFPGSGAFREL SCSNC DYQ+RRLLVRYGQTK+
Sbjct: 313 SGALNNAAAKKLDLEAWFPGSGAFRELCSCSNCTDYQARRLLVRYGQTKKMNDKTEFCHM 372
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CA+TRVIC ILE +QTE G+ +P+ LR F+ V I +VKTAPI+ +
Sbjct: 373 LNATMCASTRVICCILENNQTEEGIIVPELLRPFMGNVEF-----IKYVKTAPIEGNKDV 427
Query: 232 KQKKQKEGMKK 242
K K K+ +K
Sbjct: 428 KGKSNKKKPEK 438
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/194 (67%), Positives = 149/194 (76%), Gaps = 8/194 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFV+ SPHD+ESWK LDEM+ N+E+FY L I YR+V IVSGALN
Sbjct: 258 DTRGIFRVHQFEKVEQFVICSPHDNESWKHLDEMVNNAEKFYQALNIPYRIVGIVSGALN 317
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFPGSGAFREL SCSNC YQ+RRLLVRYGQTKKMN+K EF HMLNAT
Sbjct: 318 NAAAKKLDLEAWFPGSGAFRELCSCSNCTDYQARRLLVRYGQTKKMNDKTEFCHMLNATM 377
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA+TRVIC ILE +QTE G+ +P+ LR F+ V I +VKTAPI E K K
Sbjct: 378 CASTRVICCILENNQTEEGIIVPELLRPFMGNVEF-----IKYVKTAPI---EGNKDVKG 429
Query: 483 KEGMKKKVLIDEAM 496
K KK I+E +
Sbjct: 430 KSNKKKPEKIEENL 443
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 16/120 (13%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG + D +++KYLIATSEQPI A HR W+ + LP
Sbjct: 184 VAQLSQFDEELYKVVGKGSERDDDTA----VEEKYLIATSEQPIAAFHRGEWMSTSDLPK 239
Query: 564 RYLGVSTCFRQE--CDAGMCRTYFH----------VTCAQREGLLSEATSEEVDQADPFY 611
+Y G+S+CFRQE C R F V C+ + + E V+ A+ FY
Sbjct: 240 KYAGISSCFRQEVGCHGRDTRGIFRVHQFEKVEQFVICSPHDNESWKHLDEMVNNAEKFY 299
>gi|402592898|gb|EJW86825.1| seryl-tRNA synthetase [Wuchereria bancrofti]
Length = 482
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/241 (61%), Positives = 184/241 (76%), Gaps = 18/241 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V GKG E +GD D+KYLIATSEQPI A HR+ W+ EA LPI+Y G+S+CFRQE
Sbjct: 248 VTGKGSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLPIKYAGISSCFRQE 302
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRG+FRVHQFEK+EQFV+ SP+DDESW+MLDEM++N+E+F LGI +R+V I
Sbjct: 303 VGSHGRDTRGMFRVHQFEKIEQFVICSPYDDESWRMLDEMVENAEDFCKALGIPFRIVCI 362
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG LN+AAAKKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYG+TK+
Sbjct: 363 VSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGEVSYVH 422
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ T CATTRV+CA+LE +Q E G+R+P+ L +F+P Y IPF++ API+ +
Sbjct: 423 MLNGTMCATTRVLCALLENYQEENGIRVPEILTQFMPHPY---KELIPFIREAPIENDLK 479
Query: 231 K 231
K
Sbjct: 480 K 480
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 142/175 (81%), Gaps = 3/175 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+FRVHQFEK+EQFV+ SP+DDESW+ LDEM++N+E+F LGI +R+V IVSG LN
Sbjct: 309 DTRGMFRVHQFEKIEQFVICSPYDDESWRMLDEMVENAEDFCKALGIPFRIVCIVSGELN 368
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFPGS AFRELVSCSNC YQ+RRL +RYG+TKK++ ++ +VHMLN T
Sbjct: 369 NAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGEVSYVHMLNGTM 428
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
CATTRV+CA+LE +Q E G+R+P+ L +F+P Y IPF++ API+ + K
Sbjct: 429 CATTRVLCALLENYQEENGIRVPEILTQFMPHPY---KELIPFIREAPIENDLKK 480
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 12/88 (13%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +V GKG E +GD D+KYLIATSEQPI A HR+ W+ EA LP
Sbjct: 235 VAQLSQFDQELYKVTGKGSEVIGDETN-----DEKYLIATSEQPIAAYHRNEWISEADLP 289
Query: 563 IRYLGVSTCFRQECDA------GMCRTY 584
I+Y G+S+CFRQE + GM R +
Sbjct: 290 IKYAGISSCFRQEVGSHGRDTRGMFRVH 317
>gi|198432935|ref|XP_002127248.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase [Ciona
intestinalis]
Length = 506
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/240 (65%), Positives = 178/240 (74%), Gaps = 20/240 (8%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V+GK EK D D+KYLIATSEQPI A+HRD WL LPI+Y G STCFRQE
Sbjct: 250 VVGKSSEKAEDGGT-----DEKYLIATSEQPIAALHRDEWLEPEKLPIKYAGFSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEKVEQFV +SP + SW+ DEMI +E FY DLGI Y +V I
Sbjct: 305 VGSHGRDTRGIFRVHQFEKVEQFVYSSP--ETSWQHFDEMIATAEGFYKDLGIPYHIVCI 362
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSGALNHAAAKKLDLEAWFPGSGA RELVSCSNCLDYQ+RRL VR+GQTK+
Sbjct: 363 VSGALNHAAAKKLDLEAWFPGSGAHRELVSCSNCLDYQARRLKVRFGQTKKMMEKVDYVH 422
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRVICAILE +QTE G+ IP+ L+ F+P Y + I FV+ APIDEEE
Sbjct: 423 MLNATMCATTRVICAILENYQTEEGIVIPEVLKSFMPQQYRD---MIKFVRPAPIDEEEA 479
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/174 (71%), Positives = 141/174 (81%), Gaps = 5/174 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQFV +SP + SW+ DEMI +E FY DLGI Y +V IVSGALN
Sbjct: 311 DTRGIFRVHQFEKVEQFVYSSP--ETSWQHFDEMIATAEGFYKDLGIPYHIVCIVSGALN 368
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAAAKKLDLEAWFPGSGA RELVSCSNCL YQ+RRL VR+GQTKKM EK+++VHMLNAT
Sbjct: 369 HAAAKKLDLEAWFPGSGAHRELVSCSNCLDYQARRLKVRFGQTKKMMEKVDYVHMLNATM 428
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476
CATTRVICAILE +QTE G+ IP+ L+ F+P Y + I FV+ APIDEEE
Sbjct: 429 CATTRVICAILENYQTEEGIVIPEVLKSFMPQQYRD---MIKFVRPAPIDEEEA 479
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + ++ L +V+GK EK D D+KYLIATSEQPI A+HRD WL LP
Sbjct: 237 VAQLSQFDDELYKVVGKSSEKAEDGGT-----DEKYLIATSEQPIAALHRDEWLEPEKLP 291
Query: 563 IRYLGVSTCFRQE 575
I+Y G STCFRQE
Sbjct: 292 IKYAGFSTCFRQE 304
>gi|226489498|emb|CAX75893.1| Seryl tRNA Synthetase [Schistosoma japonicum]
Length = 614
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 168/219 (76%), Gaps = 12/219 (5%)
Query: 10 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRG 69
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQEVGSHGRDTRG
Sbjct: 264 DSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEVGSHGRDTRG 323
Query: 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
IFRVHQFEKVEQF +TSPHD+ SW+M D MI N+E FY L + YR+V+IVSG LN+AAA
Sbjct: 324 IFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGELNNAAA 383
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATT 180
K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTK+ + AT CATT
Sbjct: 384 MKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATMCATT 443
Query: 181 RVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPF 219
RVICAILE +QTE G+ +PD LR +P Y N IPF
Sbjct: 444 RVICAILENYQTEHGITVPDVLRSLMPKKYQN---FIPF 479
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 131/163 (80%), Gaps = 3/163 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD+ SW+ D MI N+E FY L + YR+V+IVSG LN
Sbjct: 320 DTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGELN 379
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLE WFPGSGAFRELVSCSNCL YQSRRL +R+GQTKKMN+ +E+VHMLNAT
Sbjct: 380 NAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATM 439
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 465
CATTRVICAILE +QTE G+ +PD LR +P Y N IPF
Sbjct: 440 CATTRVICAILENYQTEHGITVPDVLRSLMPKKYQN---FIPF 479
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 526 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQE
Sbjct: 264 DSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEV 314
>gi|226471434|emb|CAX70798.1| Seryl tRNA Synthetase [Schistosoma japonicum]
gi|226489502|emb|CAX75895.1| Seryl tRNA Synthetase [Schistosoma japonicum]
gi|226489504|emb|CAX75896.1| Seryl tRNA Synthetase [Schistosoma japonicum]
Length = 614
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 168/219 (76%), Gaps = 12/219 (5%)
Query: 10 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRG 69
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQEVGSHGRDTRG
Sbjct: 264 DSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEVGSHGRDTRG 323
Query: 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
IFRVHQFEKVEQF +TSPHD+ SW+M D MI N+E FY L + YR+V+IVSG LN+AAA
Sbjct: 324 IFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGELNNAAA 383
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATT 180
K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTK+ + AT CATT
Sbjct: 384 MKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATMCATT 443
Query: 181 RVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPF 219
RVICAILE +QTE G+ +PD LR +P Y N IPF
Sbjct: 444 RVICAILENYQTEHGITVPDVLRSLMPKKYQN---FIPF 479
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 131/163 (80%), Gaps = 3/163 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD+ SW+ D MI N+E FY L + YR+V+IVSG LN
Sbjct: 320 DTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGELN 379
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLE WFPGSGAFRELVSCSNCL YQSRRL +R+GQTKKMN+ +E+VHMLNAT
Sbjct: 380 NAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATM 439
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 465
CATTRVICAILE +QTE G+ +PD LR +P Y N IPF
Sbjct: 440 CATTRVICAILENYQTEHGITVPDVLRSLMPKKYQN---FIPF 479
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 526 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQE
Sbjct: 264 DSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEV 314
>gi|226489506|emb|CAX75897.1| Seryl tRNA Synthetase [Schistosoma japonicum]
Length = 614
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 168/219 (76%), Gaps = 12/219 (5%)
Query: 10 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRG 69
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQEVGSHGRDTRG
Sbjct: 264 DSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEVGSHGRDTRG 323
Query: 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
IFRVHQFEKVEQF +TSPHD+ SW+M D MI N+E FY L + YR+V+IVSG LN+AAA
Sbjct: 324 IFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGELNNAAA 383
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATT 180
K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTK+ + AT CATT
Sbjct: 384 MKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATMCATT 443
Query: 181 RVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPF 219
RVICAILE +QTE G+ +PD LR +P Y N IPF
Sbjct: 444 RVICAILENYQTEHGITVPDVLRSLMPKKYQN---FIPF 479
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 131/163 (80%), Gaps = 3/163 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD+ SW+ D MI N+E FY L + YR+V+IVSG LN
Sbjct: 320 DTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGELN 379
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLE WFPGSGAFRELVSCSNCL YQSRRL +R+GQTKKMN+ +E+VHMLNAT
Sbjct: 380 NAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATM 439
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 465
CATTRVICAILE +QTE G+ +PD LR +P Y N IPF
Sbjct: 440 CATTRVICAILENYQTEHGITVPDVLRSLMPKKYQN---FIPF 479
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 526 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQE
Sbjct: 264 DSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEV 314
>gi|358337063|dbj|GAA55479.1| seryl-tRNA synthetase [Clonorchis sinensis]
Length = 563
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/222 (64%), Positives = 173/222 (77%), Gaps = 12/222 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E ++KYLIATSEQPI A HRD WL LPIRY G+STCFRQEVGSHGRDTRGIFRVHQF
Sbjct: 240 EEEEKYLIATSEQPIAAYHRDEWLATDQLPIRYAGISTCFRQEVGSHGRDTRGIFRVHQF 299
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSPHD+ SW+M +MI N+E F+ LGI YR+V+IVSG LN+AAA K DLEA
Sbjct: 300 EKVEQFCITSPHDNLSWEMFHQMIANAEAFHQALGIPYRIVSIVSGELNNAAAMKYDLEA 359
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATTRVICAIL 187
WFPGSGAFRELVSCSNC DYQSRRL +RYGQTK+ + AT CATTRVICAIL
Sbjct: 360 WFPGSGAFRELVSCSNCTDYQSRRLAIRYGQTKKMNRNVEYVHMLNATMCATTRVICAIL 419
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
E +QT+ G+ +P+ ++ ++P Y + IPF + APID+++
Sbjct: 420 ENYQTDVGIVVPEAVKPWMPDAYQD---LIPFKRPAPIDQDK 458
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 140/173 (80%), Gaps = 3/173 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD+ SW+ +MI N+E F+ LGI YR+V+IVSG LN
Sbjct: 289 DTRGIFRVHQFEKVEQFCITSPHDNLSWEMFHQMIANAEAFHQALGIPYRIVSIVSGELN 348
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFPGSGAFRELVSCSNC YQSRRL +RYGQTKKMN +E+VHMLNAT
Sbjct: 349 NAAAMKYDLEAWFPGSGAFRELVSCSNCTDYQSRRLAIRYGQTKKMNRNVEYVHMLNATM 408
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
CATTRVICAILE +QT+ G+ +P+ ++ ++P Y + IPF + APID+++
Sbjct: 409 CATTRVICAILENYQTDVGIVVPEAVKPWMPDAYQD---LIPFKRPAPIDQDK 458
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 34/44 (77%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E ++KYLIATSEQPI A HRD WL LPIRY G+STCFRQE
Sbjct: 240 EEEEKYLIATSEQPIAAYHRDEWLATDQLPIRYAGISTCFRQEV 283
>gi|72135958|ref|XP_793542.1| PREDICTED: serine--tRNA ligase, cytoplasmic-like
[Strongylocentrotus purpuratus]
Length = 526
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 177/235 (75%), Gaps = 16/235 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + E++ +++KYLIATSEQPI A HR+ W+ + LP +Y G STCFRQEV
Sbjct: 253 VVGKGSE----KSEENTIEEKYLIATSEQPIAAFHRNEWMSPSELPKKYAGFSTCFRQEV 308
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQF SP D+ SW + DEM+ N+E+F LGI YR+V IV
Sbjct: 309 GSHGRDTRGIFRVHQFEKIEQFCFASPKDNMSWLLFDEMMDNAEKFCQSLGIPYRIVGIV 368
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN+AAAKKLDLEAWF GSGAFRELVSCSNC DYQ+RRLLVRYGQTK+
Sbjct: 369 SGALNNAAAKKLDLEAWFAGSGAFRELVSCSNCTDYQARRLLVRYGQTKKMNASAEYVHM 428
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+ +T CA+TRV+CAILE +QTETG+ IP+ +R+F+P Y I F K +PID
Sbjct: 429 LNSTMCASTRVVCAILENNQTETGIVIPEAIREFMPPEYKE---FIKFTKPSPID 480
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 116/170 (68%), Positives = 135/170 (79%), Gaps = 3/170 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQF SP D+ SW DEM+ N+E+F LGI YR+V IVSGALN
Sbjct: 314 DTRGIFRVHQFEKIEQFCFASPKDNMSWLLFDEMMDNAEKFCQSLGIPYRIVGIVSGALN 373
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWF GSGAFRELVSCSNC YQ+RRLLVRYGQTKKMN E+VHMLN+T
Sbjct: 374 NAAAKKLDLEAWFAGSGAFRELVSCSNCTDYQARRLLVRYGQTKKMNASAEYVHMLNSTM 433
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CA+TRV+CAILE +QTETG+ IP+ +R+F+P Y I F K +PID
Sbjct: 434 CASTRVVCAILENNQTETGIVIPEAIREFMPPEYKE---FIKFTKPSPID 480
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + ++ L +V+GKG + E++ +++KYLIATSEQPI A HR+ W+ + LP
Sbjct: 240 VAQLSQFDDELYKVVGKGSE----KSEENTIEEKYLIATSEQPIAAFHRNEWMSPSELPK 295
Query: 564 RYLGVSTCFRQE 575
+Y G STCFRQE
Sbjct: 296 KYAGFSTCFRQE 307
>gi|320168775|gb|EFW45674.1| seryl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 493
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/235 (61%), Positives = 173/235 (73%), Gaps = 14/235 (5%)
Query: 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFR 72
P + D+KYLIATSEQPI A HRD W+ LP RY G S+CFRQEVGSHGRDT GIFR
Sbjct: 262 PNDNATDEKYLIATSEQPIAAFHRDEWMDTKELPKRYAGYSSCFRQEVGSHGRDTAGIFR 321
Query: 73 VHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKL 132
VHQFEK+EQF +TSPHD ESW+M+++M++N+ +FY +LGI YRVVNIVSG LN+AA+KK
Sbjct: 322 VHQFEKIEQFCITSPHDTESWQMMEQMLKNATDFYQNLGIGYRVVNIVSGELNNAASKKY 381
Query: 133 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVIC 184
D+E WFPGS AFRELVSCSNC DYQSRRL +RYG K + +T CA TRVIC
Sbjct: 382 DVEGWFPGSKAFRELVSCSNCTDYQSRRLRIRYGTKKANEDATFVHMLNSTMCALTRVIC 441
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID---EEETKKQKKQ 236
ILET+QTE G+ +P+ LR ++PA Y I FVK APID E E K + K+
Sbjct: 442 IILETYQTEEGIVVPEVLRMYMPAQYRE---LIKFVKAAPIDKAKEAEAKTKAKK 493
Score = 242 bits (618), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/183 (63%), Positives = 141/183 (77%), Gaps = 7/183 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSPHD ESW+ +++M++N+ +FY +LGI YRVVNIVSG LN
Sbjct: 315 DTAGIFRVHQFEKIEQFCITSPHDTESWQMMEQMLKNATDFYQNLGIGYRVVNIVSGELN 374
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK D+E WFPGS AFRELVSCSNC YQSRRL +RYG TKK NE FVHMLN+T
Sbjct: 375 NAASKKYDVEGWFPGSKAFRELVSCSNCTDYQSRRLRIRYG-TKKANEDATFVHMLNSTM 433
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID---EEETKKQ 479
CA TRVIC ILET+QTE G+ +P+ LR ++PA Y I FVK APID E E K +
Sbjct: 434 CALTRVICIILETYQTEEGIVVPEVLRMYMPAQYRE---LIKFVKAAPIDKAKEAEAKTK 490
Query: 480 KKQ 482
K+
Sbjct: 491 AKK 493
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 33/48 (68%)
Query: 529 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
P + D+KYLIATSEQPI A HRD W+ LP RY G S+CFRQE
Sbjct: 262 PNDNATDEKYLIATSEQPIAAFHRDEWMDTKELPKRYAGYSSCFRQEV 309
>gi|443700547|gb|ELT99428.1| hypothetical protein CAPTEDRAFT_157579 [Capitella teleta]
Length = 512
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/240 (60%), Positives = 180/240 (75%), Gaps = 17/240 (7%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
++GKG + E+ +++KYLIATSEQP+ A HRD W+ LPI+Y G STCFRQEV
Sbjct: 250 IVGKGSE----KAEESGVEEKYLIATSEQPLAAYHRDEWIATQDLPIKYAGTSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQF L SPHDDESWK+ +EM+ N+E F LGI YR+V+IV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFCLCSPHDDESWKLFEEMLCNAETFNQSLGIPYRIVSIV 365
Query: 121 SGALNHAAAKKLDLEAWFP-GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
SG LN++AAKK D+EAWFP G+GA+RELVSCSNCLDYQ+R L VRYGQTK+
Sbjct: 366 SGELNNSAAKKNDIEAWFPSGNGAYRELVSCSNCLDYQARNLRVRYGQTKKMGQETEYVH 425
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRVICAI+E +Q E G+ +P+ LR +P Y +IPFVK API++E T
Sbjct: 426 MLNATMCATTRVICAIMENNQVEDGIIVPEVLRPLMPQDYQE---KIPFVKPAPIEQEVT 482
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 140/175 (80%), Gaps = 4/175 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQF L SPHDDESWK +EM+ N+E F LGI YR+V+IVSG LN
Sbjct: 311 DTRGIFRVHQFEKIEQFCLCSPHDDESWKLFEEMLCNAETFNQSLGIPYRIVSIVSGELN 370
Query: 363 HAAAKKLDLEAWFP-GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
++AAKK D+EAWFP G+GA+RELVSCSNCL YQ+R L VRYGQTKKM ++ E+VHMLNAT
Sbjct: 371 NSAAKKNDIEAWFPSGNGAYRELVSCSNCLDYQARNLRVRYGQTKKMGQETEYVHMLNAT 430
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476
CATTRVICAI+E +Q E G+ +P+ LR +P Y +IPFVK API++E T
Sbjct: 431 MCATTRVICAIMENNQVEDGIIVPEVLRPLMPQDYQE---KIPFVKPAPIEQEVT 482
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + ++ L +++GKG + E+ +++KYLIATSEQP+ A HRD W+ LPI
Sbjct: 237 VAQLSQFDDELYKIVGKGSE----KAEESGVEEKYLIATSEQPLAAYHRDEWIATQDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G STCFRQE
Sbjct: 293 KYAGTSTCFRQEV 305
>gi|297281888|ref|XP_001087749.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like, partial [Macaca
mulatta]
Length = 491
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/255 (58%), Positives = 177/255 (69%), Gaps = 37/255 (14%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLI TSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 101 VIGKGSEKSDD----NSYDEKYLITTSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 156
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 157 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 216
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------- 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 217 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLH 276
Query: 171 ---------------------KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 209
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P
Sbjct: 277 LSTQNKLEASLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPG 336
Query: 210 YLNEAGEIPFVKTAP 224
E+ P V+ P
Sbjct: 337 --PESASSPRVRILP 349
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 138/190 (72%), Gaps = 24/190 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 162 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 221
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE------------ 410
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +
Sbjct: 222 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLHLSTQN 281
Query: 411 ----------KIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEA 460
K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+P E+
Sbjct: 282 KLEASLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP--GPES 339
Query: 461 GEIPFVKTAP 470
P V+ P
Sbjct: 340 ASSPRVRILP 349
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLI TSEQPI A+HRD WL LPI
Sbjct: 88 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLITTSEQPIAALHRDEWLRPEDLPI 143
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFRQE +
Sbjct: 144 KYAGLSTCFRQEVGS 158
>gi|226471436|emb|CAX70799.1| Seryl tRNA Synthetase [Schistosoma japonicum]
Length = 479
Score = 299 bits (766), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/207 (67%), Positives = 163/207 (78%), Gaps = 9/207 (4%)
Query: 10 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRG 69
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQEVGSHGRDTRG
Sbjct: 264 DSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEVGSHGRDTRG 323
Query: 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
IFRVHQFEKVEQF +TSPHD+ SW+M D MI N+E FY L + YR+V+IVSG LN+AAA
Sbjct: 324 IFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGELNNAAA 383
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATT 180
K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTK+ + AT CATT
Sbjct: 384 MKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATMCATT 443
Query: 181 RVICAILETHQTETGVRIPDCLRKFVP 207
RVICAILE +QTE G+ +PD LR +P
Sbjct: 444 RVICAILENYQTERGITVPDVLRSLMP 470
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 109/151 (72%), Positives = 126/151 (83%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD+ SW+ D MI N+E FY L + YR+V+IVSG LN
Sbjct: 320 DTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFYQALKLPYRIVSIVSGELN 379
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLE WFPGSGAFRELVSCSNCL YQSRRL +R+GQTKKMN+ +E+VHMLNAT
Sbjct: 380 NAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATM 439
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVP 453
CATTRVICAILE +QTE G+ +PD LR +P
Sbjct: 440 CATTRVICAILENYQTERGITVPDVLRSLMP 470
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 526 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DS ++E ++KYLIATSEQPI A H++ WLP LPI+Y G+STCFRQE
Sbjct: 264 DSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQLPIKYAGISTCFRQEV 314
>gi|443700546|gb|ELT99427.1| hypothetical protein CAPTEDRAFT_120342, partial [Capitella teleta]
Length = 403
Score = 299 bits (766), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 146/240 (60%), Positives = 180/240 (75%), Gaps = 17/240 (7%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
++GKG + E+ +++KYLIATSEQP+ A HRD W+ LPI+Y G STCFRQEV
Sbjct: 141 IVGKGSE----KAEESGVEEKYLIATSEQPLAAYHRDEWIATQDLPIKYAGTSTCFRQEV 196
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQF L SPHDDESWK+ +EM+ N+E F LGI YR+V+IV
Sbjct: 197 GSHGRDTRGIFRVHQFEKIEQFCLCSPHDDESWKLFEEMLCNAETFNQSLGIPYRIVSIV 256
Query: 121 SGALNHAAAKKLDLEAWFP-GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
SG LN++AAKK D+EAWFP G+GA+RELVSCSNCLDYQ+R L VRYGQTK+
Sbjct: 257 SGELNNSAAKKNDIEAWFPSGNGAYRELVSCSNCLDYQARNLRVRYGQTKKMGQETEYVH 316
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRVICAI+E +Q E G+ +P+ LR +P Y +IPFVK API++E T
Sbjct: 317 MLNATMCATTRVICAIMENNQVEDGIIVPEVLRPLMPQDYQE---KIPFVKPAPIEQEVT 373
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 140/175 (80%), Gaps = 4/175 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQF L SPHDDESWK +EM+ N+E F LGI YR+V+IVSG LN
Sbjct: 202 DTRGIFRVHQFEKIEQFCLCSPHDDESWKLFEEMLCNAETFNQSLGIPYRIVSIVSGELN 261
Query: 363 HAAAKKLDLEAWFP-GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
++AAKK D+EAWFP G+GA+RELVSCSNCL YQ+R L VRYGQTKKM ++ E+VHMLNAT
Sbjct: 262 NSAAKKNDIEAWFPSGNGAYRELVSCSNCLDYQARNLRVRYGQTKKMGQETEYVHMLNAT 321
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476
CATTRVICAI+E +Q E G+ +P+ LR +P Y +IPFVK API++E T
Sbjct: 322 MCATTRVICAIMENNQVEDGIIVPEVLRPLMPQDYQE---KIPFVKPAPIEQEVT 373
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + ++ L +++GKG + E+ +++KYLIATSEQP+ A HRD W+ LPI
Sbjct: 128 VAQLSQFDDELYKIVGKGSE----KAEESGVEEKYLIATSEQPLAAYHRDEWIATQDLPI 183
Query: 564 RYLGVSTCFRQE 575
+Y G STCFRQE
Sbjct: 184 KYAGTSTCFRQE 195
>gi|353232045|emb|CCD79400.1| seryl-tRNA synthetase [Schistosoma mansoni]
Length = 619
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/210 (66%), Positives = 163/210 (77%), Gaps = 9/210 (4%)
Query: 10 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRG 69
DS + ++KYLIATSEQPI A H+D WLP LPI+Y G+STCFRQEVGSHGRDTRG
Sbjct: 264 DSQTNESGEEEKYLIATSEQPIAAFHQDEWLPIDQLPIKYAGISTCFRQEVGSHGRDTRG 323
Query: 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
IFRVHQFEKVEQF +TSPHD+ SW+M D MI N+E F+ L + YRVV+IVSG LN+AA+
Sbjct: 324 IFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFHQALKLPYRVVSIVSGELNNAAS 383
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATT 180
K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTK+ + AT CATT
Sbjct: 384 MKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNRSVEYVHMLNATMCATT 443
Query: 181 RVICAILETHQTETGVRIPDCLRKFVPAVY 210
RVICAILE +QTE G+ +PD L+ F+P Y
Sbjct: 444 RVICAILENYQTEHGIIVPDVLKSFMPKKY 473
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/154 (70%), Positives = 127/154 (82%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD+ SW+ D MI N+E F+ L + YRVV+IVSG LN
Sbjct: 320 DTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFHQALKLPYRVVSIVSGELN 379
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+ K DLE WFPGSGAFRELVSCSNCL YQSRRL +R+GQTKKMN +E+VHMLNAT
Sbjct: 380 NAASMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNRSVEYVHMLNATM 439
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVY 456
CATTRVICAILE +QTE G+ +PD L+ F+P Y
Sbjct: 440 CATTRVICAILENYQTEHGIIVPDVLKSFMPKKY 473
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 526 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DS + ++KYLIATSEQPI A H+D WLP LPI+Y G+STCFRQE
Sbjct: 264 DSQTNESGEEEKYLIATSEQPIAAFHQDEWLPIDQLPIKYAGISTCFRQEV 314
>gi|256080782|ref|XP_002576656.1| seryl-tRNA synthetase [Schistosoma mansoni]
Length = 619
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/210 (66%), Positives = 163/210 (77%), Gaps = 9/210 (4%)
Query: 10 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRG 69
DS + ++KYLIATSEQPI A H+D WLP LPI+Y G+STCFRQEVGSHGRDTRG
Sbjct: 264 DSQTNESGEEEKYLIATSEQPIAAFHQDEWLPIDQLPIKYAGISTCFRQEVGSHGRDTRG 323
Query: 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
IFRVHQFEKVEQF +TSPHD+ SW+M D MI N+E F+ L + YRVV+IVSG LN+AA+
Sbjct: 324 IFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFHQALKLPYRVVSIVSGELNNAAS 383
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATT 180
K DLE WFPGSGAFRELVSCSNCLDYQSRRL +R+GQTK+ + AT CATT
Sbjct: 384 MKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATMCATT 443
Query: 181 RVICAILETHQTETGVRIPDCLRKFVPAVY 210
RVICAILE +QTE G+ +PD L+ F+P Y
Sbjct: 444 RVICAILENYQTEHGIIVPDVLKSFMPKKY 473
Score = 242 bits (618), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 109/154 (70%), Positives = 128/154 (83%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSPHD+ SW+ D MI N+E F+ L + YRVV+IVSG LN
Sbjct: 320 DTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEAFHQALKLPYRVVSIVSGELN 379
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+ K DLE WFPGSGAFRELVSCSNCL YQSRRL +R+GQTKKMN+ +E+VHMLNAT
Sbjct: 380 NAASMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRFGQTKKMNKSVEYVHMLNATM 439
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVY 456
CATTRVICAILE +QTE G+ +PD L+ F+P Y
Sbjct: 440 CATTRVICAILENYQTEHGIIVPDVLKSFMPKKY 473
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 526 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DS + ++KYLIATSEQPI A H+D WLP LPI+Y G+STCFRQE
Sbjct: 264 DSQTNESGEEEKYLIATSEQPIAAFHQDEWLPIDQLPIKYAGISTCFRQEV 314
>gi|313226936|emb|CBY22081.1| unnamed protein product [Oikopleura dioica]
Length = 498
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/250 (58%), Positives = 179/250 (71%), Gaps = 16/250 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + PE + ++YLIATSEQPI A H D L SLPI+Y G+S CFRQEV
Sbjct: 256 VVGKGSE----NPEDKSVSEQYLIATSEQPIAAFHYDEGLKPESLPIKYAGLSYCFRQEV 311
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDT GIFRV QF+KVEQF SPHD+ SW L++MI +E Y ++GI YR+VNI
Sbjct: 312 GSHGRDTTGIFRVKQFQKVEQFTFCSPHDNTSWDELEKMITMAENLYKEIGIGYRIVNIC 371
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN AAAKK DLEAWFPGSGAFRELVSCSNCLDYQ+R L +R+G+TKQ
Sbjct: 372 SGALNLAAAKKYDLEAWFPGSGAFRELVSCSNCLDYQARNLNIRFGETKQVNKKQDYVHM 431
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRV+CAILET+Q + GV +P+ LR ++PA + +PFVK API+ E K
Sbjct: 432 LNATMCATTRVMCAILETNQEQDGVVVPEALRPYMPAKWKE---FLPFVKEAPIEIEARK 488
Query: 232 KQKKQKEGMK 241
+K+ +G K
Sbjct: 489 AAEKKNKGKK 498
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 143/185 (77%), Gaps = 3/185 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRV QF+KVEQF SPHD+ SW L++MI +E Y ++GI YR+VNI SGALN
Sbjct: 317 DTTGIFRVKQFQKVEQFTFCSPHDNTSWDELEKMITMAENLYKEIGIGYRIVNICSGALN 376
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPGSGAFRELVSCSNCL YQ+R L +R+G+TK++N+K ++VHMLNAT
Sbjct: 377 LAAAKKYDLEAWFPGSGAFRELVSCSNCLDYQARNLNIRFGETKQVNKKQDYVHMLNATM 436
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRV+CAILET+Q + GV +P+ LR ++PA + +PFVK API+ E K +K+
Sbjct: 437 CATTRVMCAILETNQEQDGVVVPEALRPYMPAKWKE---FLPFVKEAPIEIEARKAAEKK 493
Query: 483 KEGMK 487
+G K
Sbjct: 494 NKGKK 498
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + ++ L +V+GKG + PE + ++YLIATSEQPI A H D L SLPI
Sbjct: 243 VAQLSQFDDELYKVVGKGSE----NPEDKSVSEQYLIATSEQPIAAFHYDEGLKPESLPI 298
Query: 564 RYLGVSTCFRQECDA 578
+Y G+S CFRQE +
Sbjct: 299 KYAGLSYCFRQEVGS 313
>gi|313241186|emb|CBY33477.1| unnamed protein product [Oikopleura dioica]
Length = 498
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 146/250 (58%), Positives = 178/250 (71%), Gaps = 16/250 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG + PE + ++YLIATSEQPI A H D L SLPI+Y G+S CFRQEV
Sbjct: 256 VVGKGSE----NPEDKSVSEQYLIATSEQPIAAFHYDEGLKPESLPIKYAGLSYCFRQEV 311
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDT GIFRV QF+KVEQF SPHD+ SW L+ MI +E Y ++GI YR+VNI
Sbjct: 312 GSHGRDTTGIFRVKQFQKVEQFTFCSPHDNTSWDELENMITMAENLYKEIGIGYRIVNIC 371
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN AAAKK DLEAWFPGSGAFRELVSCSNCLDYQ+R L +R+G+TKQ
Sbjct: 372 SGALNLAAAKKYDLEAWFPGSGAFRELVSCSNCLDYQARNLNIRFGETKQVNKKQDYVHM 431
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTRV+CAILET+Q + GV +P+ LR ++PA + +PFVK API+ E K
Sbjct: 432 LNATMCATTRVMCAILETNQEQDGVVVPEALRPYMPAKWKE---FLPFVKEAPIEIEARK 488
Query: 232 KQKKQKEGMK 241
+K+ +G K
Sbjct: 489 TAEKKNKGKK 498
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 142/185 (76%), Gaps = 3/185 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRV QF+KVEQF SPHD+ SW L+ MI +E Y ++GI YR+VNI SGALN
Sbjct: 317 DTTGIFRVKQFQKVEQFTFCSPHDNTSWDELENMITMAENLYKEIGIGYRIVNICSGALN 376
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPGSGAFRELVSCSNCL YQ+R L +R+G+TK++N+K ++VHMLNAT
Sbjct: 377 LAAAKKYDLEAWFPGSGAFRELVSCSNCLDYQARNLNIRFGETKQVNKKQDYVHMLNATM 436
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRV+CAILET+Q + GV +P+ LR ++PA + +PFVK API+ E K +K+
Sbjct: 437 CATTRVMCAILETNQEQDGVVVPEALRPYMPAKWKE---FLPFVKEAPIEIEARKTAEKK 493
Query: 483 KEGMK 487
+G K
Sbjct: 494 NKGKK 498
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + ++ L +V+GKG + PE + ++YLIATSEQPI A H D L SLPI
Sbjct: 243 VAQLSQFDDELYKVVGKGSE----NPEDKSVSEQYLIATSEQPIAAFHYDEGLKPESLPI 298
Query: 564 RYLGVSTCFRQECDA 578
+Y G+S CFRQE +
Sbjct: 299 KYAGLSYCFRQEVGS 313
>gi|156400967|ref|XP_001639063.1| predicted protein [Nematostella vectensis]
gi|156226189|gb|EDO47000.1| predicted protein [Nematostella vectensis]
Length = 507
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/237 (61%), Positives = 175/237 (73%), Gaps = 20/237 (8%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V+GKG D A ++KYLIATSEQPI A HR W+ + LP +Y G STCFRQE
Sbjct: 250 VVGKG---ADEAG----YEEKYLIATSEQPIAAFHRGEWMDKNDLPKKYAGFSTCFRQEA 302
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
G+HGRDTRGIFRVHQFEK+EQFV+ SPHD+ SW++ DEMI N+EEF+ LGI YR+V+IV
Sbjct: 303 GAHGRDTRGIFRVHQFEKIEQFVICSPHDNISWEIFDEMIGNAEEFHKSLGIPYRIVSIV 362
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------- 171
SGALN+AAAKKLDLEAWFP SGAFRELVSCSNC DYQ+RRL VR+GQTK+
Sbjct: 363 SGALNNAAAKKLDLEAWFPASGAFRELVSCSNCTDYQARRLQVRFGQTKKMGVSTEYVHM 422
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+ AT CA +RVICAILE +QTE GV +P L ++P + + FVK APID++
Sbjct: 423 LNATMCAVSRVICAILENNQTEEGVVMPQALHPYLP----QDLHFLKFVKPAPIDDK 475
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/172 (67%), Positives = 137/172 (79%), Gaps = 4/172 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV+ SPHD+ SW+ DEMI N+EEF+ LGI YR+V+IVSGALN
Sbjct: 308 DTRGIFRVHQFEKIEQFVICSPHDNISWEIFDEMIGNAEEFHKSLGIPYRIVSIVSGALN 367
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP SGAFRELVSCSNC YQ+RRL VR+GQTKKM E+VHMLNAT
Sbjct: 368 NAAAKKLDLEAWFPASGAFRELVSCSNCTDYQARRLQVRFGQTKKMGVSTEYVHMLNATM 427
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CA +RVICAILE +QTE GV +P L ++P + + FVK APID++
Sbjct: 428 CAVSRVICAILENNQTEEGVVMPQALHPYLP----QDLHFLKFVKPAPIDDK 475
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 19/120 (15%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +V+GKG D A ++KYLIATSEQPI A HR W+ + LP
Sbjct: 237 VAQLSQFDEELYKVVGKG---ADEAG----YEEKYLIATSEQPIAAFHRGEWMDKNDLPK 289
Query: 564 RYLGVSTCFRQECDA------GMCRTY------FHVTCAQREGLLSEATSEEVDQADPFY 611
+Y G STCFRQE A G+ R + V C+ + + E E + A+ F+
Sbjct: 290 KYAGFSTCFRQEAGAHGRDTRGIFRVHQFEKIEQFVICSPHDNISWEIFDEMIGNAEEFH 349
>gi|326431366|gb|EGD76936.1| seryl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
Length = 530
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/239 (60%), Positives = 174/239 (72%), Gaps = 22/239 (9%)
Query: 1 VIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V GK ++ GD+A E +KYLIAT+EQPI A H++ + +P+RY+GVS CFRQE
Sbjct: 265 VTGKASEIQGDTAVE-----EKYLIATAEQPIAAYHQEETIVPKDVPLRYVGVSECFRQE 319
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDT GIFRVHQF+K+EQFV+TSPHD ESWKM+DEM+ N+E+F LG+ Y+VVNI
Sbjct: 320 VGSHGRDTTGIFRVHQFKKIEQFVITSPHDGESWKMMDEMLTNAEDFLKSLGLPYQVVNI 379
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------- 171
VSGALN AAAKKLD+EAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQ K
Sbjct: 380 VSGALNLAAAKKLDIEAWFPGSGAFRELVSCSNCTDYQARRLNIRYGQKKMNARTEHVHM 439
Query: 172 IYATACATTRVICAILETHQ-----TETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPI 225
+ +T CATTR IC ILE Q + G+ +P+ LR F+P Y IPFVK API
Sbjct: 440 LNSTLCATTRTICCILENFQVGDLESNGGIVVPEVLRPFMPDQYKE---FIPFVKPAPI 495
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/174 (66%), Positives = 134/174 (77%), Gaps = 9/174 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+TSPHD ESWK +DEM+ N+E+F LG+ Y+VVNIVSGALN
Sbjct: 326 DTTGIFRVHQFKKIEQFVITSPHDGESWKMMDEMLTNAEDFLKSLGLPYQVVNIVSGALN 385
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKKLD+EAWFPGSGAFRELVSCSNC YQ+RRL +RYGQ KKMN + E VHMLN+T
Sbjct: 386 LAAAKKLDIEAWFPGSGAFRELVSCSNCTDYQARRLNIRYGQ-KKMNARTEHVHMLNSTL 444
Query: 423 CATTRVICAILETHQ-----TETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPI 471
CATTR IC ILE Q + G+ +P+ LR F+P Y IPFVK API
Sbjct: 445 CATTRTICCILENFQVGDLESNGGIVVPEVLRPFMPDQYKE---FIPFVKPAPI 495
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 504 IATEKERNNALREVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +V GK ++ GD+A E +KYLIAT+EQPI A H++ + +P
Sbjct: 252 VAQLSQFDEELYKVTGKASEIQGDTAVE-----EKYLIATAEQPIAAYHQEETIVPKDVP 306
Query: 563 IRYLGVSTCFRQE 575
+RY+GVS CFRQE
Sbjct: 307 LRYVGVSECFRQE 319
>gi|311334530|emb|CBN08646.1| seryl-tRNA synthetase [Microcosmus squamiger]
Length = 449
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 158/201 (78%), Gaps = 12/201 (5%)
Query: 8 VGDSAPEKDE-LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRD 66
+G ++ + DE +D+KYLIATSEQPI A HRD WL LPI+Y G STCFRQE GSHGRD
Sbjct: 251 IGKASDKSDEGVDEKYLIATSEQPIAAFHRDEWLKREDLPIKYAGFSTCFRQEAGSHGRD 310
Query: 67 TRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 126
TRGIFRVHQFEK+EQFV ++P D+SW+ D MI +E FY LGI YR++NIVSGALN+
Sbjct: 311 TRGIFRVHQFEKIEQFVFSAP--DDSWEAFDTMIGTAESFYKKLGIPYRIINIVSGALNN 368
Query: 127 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATAC 177
AAAKK DLEAWFPGSGAFRELVSCSNCLDYQ+RRL +R+GQTK+ + AT C
Sbjct: 369 AAAKKFDLEAWFPGSGAFRELVSCSNCLDYQARRLRIRFGQTKKMMEKTEFVHMLNATMC 428
Query: 178 ATTRVICAILETHQTETGVRI 198
ATTRVICAILE +QTE GV +
Sbjct: 429 ATTRVICAILENYQTEEGVVV 449
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/142 (75%), Positives = 121/142 (85%), Gaps = 2/142 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV ++P D+SW+ D MI +E FY LGI YR++NIVSGALN
Sbjct: 310 DTRGIFRVHQFEKIEQFVFSAP--DDSWEAFDTMIGTAESFYKKLGIPYRIINIVSGALN 367
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFPGSGAFRELVSCSNCL YQ+RRL +R+GQTKKM EK EFVHMLNAT
Sbjct: 368 NAAAKKFDLEAWFPGSGAFRELVSCSNCLDYQARRLRIRFGQTKKMMEKTEFVHMLNATM 427
Query: 423 CATTRVICAILETHQTETGVRI 444
CATTRVICAILE +QTE GV +
Sbjct: 428 CATTRVICAILENYQTEEGVVV 449
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGK D +D+KYLIATSEQPI A HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKASDKSDEG-----VDEKYLIATSEQPIAAFHRDEWLKREDLPI 291
Query: 564 RYLGVSTCFRQEC 576
+Y G STCFRQE
Sbjct: 292 KYAGFSTCFRQEA 304
>gi|167524046|ref|XP_001746359.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775121|gb|EDQ88746.1| predicted protein [Monosiga brevicollis MX1]
Length = 887
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/270 (54%), Positives = 186/270 (68%), Gaps = 23/270 (8%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V GK + + A E+++KYLIAT+EQPI A HR+ W+ LP+RY+GVS CFRQEV
Sbjct: 401 VTGKASERAEDA----EVEEKYLIATAEQPIAAFHRNEWINPEELPLRYVGVSECFRQEV 456
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDT GIFRVHQF+K+EQFV+ SPHDD SWK++DEM+ N+E+F +G+ Y+VV+IV
Sbjct: 457 GSHGRDTLGIFRVHQFKKIEQFVICSPHDDISWKLMDEMLANAEDFLKAIGLPYQVVSIV 516
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SGALN AAAKK D+EAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 517 SGALNLAAAKKNDVEAWFPGSGAFRELVSCSNCTDYQARRLKIRYGQTKKLNARTDYVHM 576
Query: 172 IYATACATTRVICAILETHQTET-----GVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+ +T CATTR +C ILE Q GV +P+ LR ++P+ Y IPFVK APID
Sbjct: 577 LNSTLCATTRNVCCILENFQVGNFSNGGGVVVPEVLRPYMPSQYRE---FIPFVKPAPID 633
Query: 227 EEETKKQKKQKEGMKKKLTMSLFSQVGSHG 256
E + K ++ +T S + G G
Sbjct: 634 VERAAAEAKGS--LRTVVTGSASNVSGGSG 661
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 138/184 (75%), Gaps = 8/184 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+ SPHDD SWK +DEM+ N+E+F +G+ Y+VV+IVSGALN
Sbjct: 462 DTLGIFRVHQFKKIEQFVICSPHDDISWKLMDEMLANAEDFLKAIGLPYQVVSIVSGALN 521
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK D+EAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKK+N + ++VHMLN+T
Sbjct: 522 LAAAKKNDVEAWFPGSGAFRELVSCSNCTDYQARRLKIRYGQTKKLNARTDYVHMLNSTL 581
Query: 423 CATTRVICAILETHQTET-----GVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
CATTR +C ILE Q GV +P+ LR ++P+ Y IPFVK APID E
Sbjct: 582 CATTRNVCCILENFQVGNFSNGGGVVVPEVLRPYMPSQYRE---FIPFVKPAPIDVERAA 638
Query: 478 KQKK 481
+ K
Sbjct: 639 AEAK 642
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + N L +V GK + + A E+++KYLIAT+EQPI A HR+ W+ LP+
Sbjct: 388 VAQLSQFNEELYKVTGKASERAEDA----EVEEKYLIATAEQPIAAFHRNEWINPEELPL 443
Query: 564 RYLGVSTCFRQE 575
RY+GVS CFRQE
Sbjct: 444 RYVGVSECFRQE 455
>gi|135172|sp|P26636.1|SYSC_CRIGR RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|553843|gb|AAA37019.1| transfer RNA-Ser synthetase, partial [Cricetulus griseus]
Length = 199
Score = 282 bits (721), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV TSPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 5 DTRGIFRVHQFEKIEQFVYTSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNIVSGSLN 64
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 65 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 124
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 125 CATTRTICAILENYQTEKGIIVPEKLREFMPPG-LQEL--IPFVKPAPIDQEPSKKQKKQ 181
Query: 483 KEGMKKK 489
EG KK+
Sbjct: 182 HEGSKKE 188
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/190 (68%), Positives = 152/190 (80%), Gaps = 12/190 (6%)
Query: 63 HGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSG 122
HGRDTRGIFRVHQFEK+EQFV TSPHD++SW+M +EMI +EEFY LGI Y +VNIVSG
Sbjct: 2 HGRDTRGIFRVHQFEKIEQFVYTSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNIVSG 61
Query: 123 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIY 173
+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+ +
Sbjct: 62 SLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLN 121
Query: 174 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
AT CATTR ICAILE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +KKQ
Sbjct: 122 ATMCATTRTICAILENYQTEKGIIVPEKLREFMPPG-LQEL--IPFVKPAPIDQEPSKKQ 178
Query: 234 KKQKEGMKKK 243
KKQ EG KK+
Sbjct: 179 KKQHEGSKKE 188
>gi|428180811|gb|EKX49677.1| hypothetical protein GUITHDRAFT_67599 [Guillardia theta CCMP2712]
Length = 465
Score = 276 bits (705), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 162/218 (74%), Gaps = 13/218 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIATSEQPICA HR+ W+ LP +Y+G+STCFR+EVGSHGRDT GIFRVHQF
Sbjct: 247 EGDDKYLIATSEQPICAYHRNLWVDPKELPRKYVGISTCFRKEVGSHGRDTLGIFRVHQF 306
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +TSP D++SW+ML+EMI SEEFY LGI YRVV IVSGALN AAAKK DLEA
Sbjct: 307 EKIEQFCVTSPEDNKSWEMLEEMIGTSEEFYKSLGIPYRVVAIVSGALNDAAAKKYDLEA 366
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQK----IYATACATTRVICAILE 188
WFPGSGA+RELVSCSNC DYQ+RR+ R+G Q KQ + +T AT R +C ++E
Sbjct: 367 WFPGSGAYRELVSCSNCTDYQARRVETRFGASAAQKKQSYVHMLNSTLTATERTLCCLVE 426
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+QTE G+ +P+ L+ F+ IPFV P++
Sbjct: 427 NYQTEDGMNVPEVLQPFMGGKKF-----IPFVNPKPVE 459
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 124/170 (72%), Gaps = 6/170 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP D++SW+ L+EMI SEEFY LGI YRVV IVSGALN
Sbjct: 296 DTLGIFRVHQFEKIEQFCVTSPEDNKSWEMLEEMIGTSEEFYKSLGIPYRVVAIVSGALN 355
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPGSGA+RELVSCSNC YQ+RR+ R+G + +K +VHMLN+T
Sbjct: 356 DAAAKKYDLEAWFPGSGAYRELVSCSNCTDYQARRVETRFGAS-AAQKKQSYVHMLNSTL 414
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
AT R +C ++E +QTE G+ +P+ L+ F+ IPFV P++
Sbjct: 415 TATERTLCCLVENYQTEDGMNVPEVLQPFMGGKKF-----IPFVNPKPVE 459
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
E DDKYLIATSEQPICA HR+ W+ LP +Y+G+STCFR+E
Sbjct: 247 EGDDKYLIATSEQPICAYHRNLWVDPKELPRKYVGISTCFRKE 289
>gi|168038680|ref|XP_001771828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676959|gb|EDQ63436.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 451
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 159/217 (73%), Gaps = 14/217 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA+HR SW+ LPI+Y G STCFR+E GSHGRDT GIFRVHQF
Sbjct: 214 EGDDKYLIATAEQPLCALHRGSWMDPKQLPIKYAGYSTCFRKEAGSHGRDTLGIFRVHQF 273
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSP+DDESWKM +EM++NSE+FY LG+ YRVV+IVSGALN +AAKK DLEA
Sbjct: 274 EKVEQFCITSPNDDESWKMHEEMLKNSEDFYQQLGLPYRVVSIVSGALNDSAAKKYDLEA 333
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S FRELVSCSNC D+QSR L +RYGQ K + +T AT R +C IL
Sbjct: 334 WFPASKTFRELVSCSNCTDFQSRNLEIRYGQKKMNDQVKNYCHLLNSTLTATERTLCCIL 393
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+R+P+ L+ F+ +PF + AP
Sbjct: 394 ENYQTPEGLRVPEVLQPFMLGTDF-----LPFTQEAP 425
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 128/169 (75%), Gaps = 7/169 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +TSP+DDESWK +EM++NSE+FY LG+ YRVV+IVSGALN
Sbjct: 263 DTLGIFRVHQFEKVEQFCITSPNDDESWKMHEEMLKNSEDFYQQLGLPYRVVSIVSGALN 322
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE-FVHMLNAT 421
+AAKK DLEAWFP S FRELVSCSNC +QSR L +RYGQ KKMN++++ + H+LN+T
Sbjct: 323 DSAAKKYDLEAWFPASKTFRELVSCSNCTDFQSRNLEIRYGQ-KKMNDQVKNYCHLLNST 381
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QT G+R+P+ L+ F+ +PF + AP
Sbjct: 382 LTATERTLCCILENYQTPEGLRVPEVLQPFMLGTDF-----LPFTQEAP 425
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DDKYLIAT+EQP+CA+HR SW+ LPI+Y G STCFR+E +
Sbjct: 214 EGDDKYLIATAEQPLCALHRGSWMDPKQLPIKYAGYSTCFRKEAGS 259
>gi|356535091|ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
Length = 447
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/227 (59%), Positives = 162/227 (71%), Gaps = 15/227 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ LPIRY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIATAEQPLCAYHLDDWIHPTQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF LTSP+D++SW M +EM++NSE+FY L + Y+VV+IVSGALN AAAKK DLEA
Sbjct: 286 EKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKALNLPYQVVSIVSGALNDAAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S A+RELVSCSNC DYQ+RRL +RYGQ K + +T AT R IC IL
Sbjct: 346 WFPASQAYRELVSCSNCTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTLTATERTICCIL 405
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +Q E GV IP+ LR F+ +PF K+ P +E + KK K
Sbjct: 406 ENNQKEDGVEIPEVLRPFMGGKTF-----LPF-KSQPSNEAKGKKSK 446
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 129/178 (72%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF LTSP+D++SW +EM++NSE+FY L + Y+VV+IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKALNLPYQVVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S A+RELVSCSNC YQ+RRL +RYGQ K + ++VH+LN+T
Sbjct: 335 DAAAKKYDLEAWFPASQAYRELVSCSNCTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E GV IP+ LR F+ +PF K+ P +E + KK K
Sbjct: 395 TATERTICCILENNQKEDGVEIPEVLRPFMGGKTF-----LPF-KSQPSNEAKGKKSK 446
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDKYLIAT+EQP+CA H D W+ LPIRY G S+CFR+E
Sbjct: 226 EGDDKYLIATAEQPLCAYHLDDWIHPTQLPIRYAGYSSCFRKEA 269
>gi|302789692|ref|XP_002976614.1| hypothetical protein SELMODRAFT_105474 [Selaginella moellendorffii]
gi|300155652|gb|EFJ22283.1| hypothetical protein SELMODRAFT_105474 [Selaginella moellendorffii]
Length = 456
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 158/217 (72%), Gaps = 14/217 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+KYLIATSEQP+CA HR W+ SLPIRY G+STCFR+E GSHGRDT GIFRVHQF
Sbjct: 225 EKDEKYLIATSEQPLCAYHRGDWMDPKSLPIRYAGLSTCFRKEAGSHGRDTLGIFRVHQF 284
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+EQF +TSP DESWKM +EM++NSE+FY +LGI Y+VV IVSGALN AAAKK DLEA
Sbjct: 285 DKIEQFCITSPLGDESWKMHEEMLKNSEDFYQELGIPYQVVVIVSGALNDAAAKKYDLEA 344
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S A+RELVSCSNC DYQ+R L +RYGQT + +T AT R +C IL
Sbjct: 345 WFPASKAYRELVSCSNCTDYQARNLDIRYGQTTANEQPKHFVHLLNSTLTATQRTLCCIL 404
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QTE G+R+P L+ ++ + IPF AP
Sbjct: 405 ENYQTEDGLRVPKALQPYMAGLEF-----IPFSVKAP 436
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 122/168 (72%), Gaps = 5/168 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQF +TSP DESWK +EM++NSE+FY +LGI Y+VV IVSGALN
Sbjct: 274 DTLGIFRVHQFDKIEQFCITSPLGDESWKMHEEMLKNSEDFYQELGIPYQVVVIVSGALN 333
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S A+RELVSCSNC YQ+R L +RYGQT + FVH+LN+T
Sbjct: 334 DAAAKKYDLEAWFPASKAYRELVSCSNCTDYQARNLDIRYGQTTANEQPKHFVHLLNSTL 393
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QTE G+R+P L+ ++ + IPF AP
Sbjct: 394 TATQRTLCCILENYQTEDGLRVPKALQPYMAGLEF-----IPFSVKAP 436
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 36/46 (78%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E D+KYLIATSEQP+CA HR W+ SLPIRY G+STCFR+E +
Sbjct: 225 EKDEKYLIATSEQPLCAYHRGDWMDPKSLPIRYAGLSTCFRKEAGS 270
>gi|356576773|ref|XP_003556504.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
Length = 447
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/227 (59%), Positives = 161/227 (70%), Gaps = 15/227 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIATAEQPLCAYHLDDWIHPTQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF LTSP+D++SW M +EM++NSE+FY L + Y+VV+IVSGALN AAAKK DLEA
Sbjct: 286 EKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKALNLPYQVVSIVSGALNDAAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S A+RELVSCSNC DYQ+RRL +RYGQ K + +T AT R IC IL
Sbjct: 346 WFPASQAYRELVSCSNCTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTLTATERTICCIL 405
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +Q E GV IP+ LR F+ +PF K P +E + KK K
Sbjct: 406 ENNQKEDGVEIPEALRPFMGGKTF-----LPF-KNQPSNEAKGKKSK 446
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 128/178 (71%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF LTSP+D++SW +EM++NSE+FY L + Y+VV+IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKALNLPYQVVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S A+RELVSCSNC YQ+RRL +RYGQ K + ++VH+LN+T
Sbjct: 335 DAAAKKYDLEAWFPASQAYRELVSCSNCTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E GV IP+ LR F+ +PF K P +E + KK K
Sbjct: 395 TATERTICCILENNQKEDGVEIPEALRPFMGGKTF-----LPF-KNQPSNEAKGKKSK 446
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E
Sbjct: 226 EGDDKYLIATAEQPLCAYHLDDWIHPTQLPLRYAGYSSCFRKEA 269
>gi|302783034|ref|XP_002973290.1| hypothetical protein SELMODRAFT_99251 [Selaginella moellendorffii]
gi|300159043|gb|EFJ25664.1| hypothetical protein SELMODRAFT_99251 [Selaginella moellendorffii]
Length = 456
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 158/217 (72%), Gaps = 14/217 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+KYLIATSEQP+C+ HR W+ SLPIRY G+STCFR+E GSHGRDT GIFRVHQF
Sbjct: 225 EKDEKYLIATSEQPLCSYHRGDWMDPKSLPIRYAGLSTCFRKEAGSHGRDTLGIFRVHQF 284
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+EQF +TSP DESWKM +EM++NSE+FY +LGI Y+VV IVSGALN AAAKK DLEA
Sbjct: 285 DKIEQFCITSPLGDESWKMHEEMLKNSEDFYQELGIPYQVVVIVSGALNDAAAKKYDLEA 344
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S A+RELVSCSNC DYQ+R L +RYGQT + +T AT R +C IL
Sbjct: 345 WFPASKAYRELVSCSNCTDYQARNLDIRYGQTTANEQPKHFVHLLNSTLTATQRTLCCIL 404
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QTE G+R+P L+ ++ + IPF AP
Sbjct: 405 ENYQTEDGLRVPKALQPYMAGLEF-----IPFSVKAP 436
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 122/168 (72%), Gaps = 5/168 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQF +TSP DESWK +EM++NSE+FY +LGI Y+VV IVSGALN
Sbjct: 274 DTLGIFRVHQFDKIEQFCITSPLGDESWKMHEEMLKNSEDFYQELGIPYQVVVIVSGALN 333
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S A+RELVSCSNC YQ+R L +RYGQT + FVH+LN+T
Sbjct: 334 DAAAKKYDLEAWFPASKAYRELVSCSNCTDYQARNLDIRYGQTTANEQPKHFVHLLNSTL 393
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QTE G+R+P L+ ++ + IPF AP
Sbjct: 394 TATQRTLCCILENYQTEDGLRVPKALQPYMAGLEF-----IPFSVKAP 436
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E D+KYLIATSEQP+C+ HR W+ SLPIRY G+STCFR+E +
Sbjct: 225 EKDEKYLIATSEQPLCSYHRGDWMDPKSLPIRYAGLSTCFRKEAGS 270
>gi|297279471|ref|XP_001089358.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 459
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 143/170 (84%), Gaps = 4/170 (2%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ 170
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 415
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/111 (74%), Positives = 98/111 (88%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE 413
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K++
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVD 421
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>gi|388522659|gb|AFK49391.1| unknown [Lotus japonicus]
Length = 238
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 137/227 (60%), Positives = 162/227 (71%), Gaps = 17/227 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ + LPIRY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 20 EGDDKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 79
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF LTSP+D++SW M +EM++NSE+FY +L I YRVV+IVSGALN AAAKK DLEA
Sbjct: 80 EKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKELNIPYRVVSIVSGALNDAAAKKYDLEA 139
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S A+RELVSCSNC DYQ+RRL +RYGQ K + +T AT R IC IL
Sbjct: 140 WFPASQAYRELVSCSNCTDYQARRLEIRYGQRKSNEQLKQYVHLLNSTLTATERTICCIL 199
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +Q + GV IP+ LR Y+ IPF K P E + KK K
Sbjct: 200 ENNQKDDGVEIPEALRP-----YMGGKSFIPF-KNQP--EAKGKKSK 238
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 128/178 (71%), Gaps = 8/178 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF LTSP+D++SW +EM++NSE+FY +L I YRVV+IVSGALN
Sbjct: 69 DTLGIFRVHQFEKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKELNIPYRVVSIVSGALN 128
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S A+RELVSCSNC YQ+RRL +RYGQ K + ++VH+LN+T
Sbjct: 129 DAAAKKYDLEAWFPASQAYRELVSCSNCTDYQARRLEIRYGQRKSNEQLKQYVHLLNSTL 188
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q + GV IP+ LR Y+ IPF K P E + KK K
Sbjct: 189 TATERTICCILENNQKDDGVEIPEALRP-----YMGGKSFIPF-KNQP--EAKGKKSK 238
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
E DDKYLIAT+EQP+CA H D W+ + LPIRY G S+CFR+E
Sbjct: 20 EGDDKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKE 62
>gi|226358659|gb|ACO51182.1| seryl-tRNA synthetase [Hypophthalmichthys nobilis]
Length = 196
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 141/172 (81%), Gaps = 4/172 (2%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + +D+KYLIATSEQPI A RD WL LPIRY G+STCFRQEV
Sbjct: 26 VIGKGSEKSDD----NTVDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYAGMSTCFRQEV 81
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV SPHD +SW+M DEM+ +EEFY LGI YR+VNIV
Sbjct: 82 GSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMVGTAEEFYQSLGIPYRIVNIV 141
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI 172
SGALNHAA+KKLDLEAWFPGS AFRELVSCSNC DYQ+RRL +RYGQTK+ +
Sbjct: 142 SGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMM 193
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/110 (76%), Positives = 95/110 (86%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV SPHD +SW+ DEM+ +EEFY LGI YR+VNIVSGALN
Sbjct: 87 DTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMVGTAEEFYQSLGIPYRIVNIVSGALN 146
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI 412
HAA+KKLDLEAWFPGS AFRELVSCSNC YQ+RRL +RYGQTKKM +K+
Sbjct: 147 HAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 196
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 16/120 (13%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + +D+KYLIATSEQPI A RD WL LPI
Sbjct: 13 VAQLSQFDEELYKVIGKGSEKSDD----NTVDEKYLIATSEQPIAAFLRDEWLKPEDLPI 68
Query: 564 RYLGVSTCFRQECDA------GMCRTY------FHVTCAQREGLLSEATSEEVDQADPFY 611
RY G+STCFRQE + G+ R + V + +G E E V A+ FY
Sbjct: 69 RYAGMSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMVGTAEEFY 128
>gi|224081391|ref|XP_002306393.1| predicted protein [Populus trichocarpa]
gi|222855842|gb|EEE93389.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/227 (58%), Positives = 160/227 (70%), Gaps = 15/227 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ + LPIRY G S+CFR+E G+HGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGAHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSP+ ++SW+M +EMI+NSEEFY +L I Y+VV IVSGALN AAAKK DLE
Sbjct: 286 EKVEQFCITSPNGNDSWEMHEEMIKNSEEFYQELNIPYQVVAIVSGALNDAAAKKYDLEG 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S +RELVSCSNC DYQSRRL +RYGQ K + +T AT R IC IL
Sbjct: 346 WFPASNTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQVKQYCHLLNSTLTATERTICCIL 405
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +Q E GV +P+ LRK++ +PF + P E + KK K
Sbjct: 406 ENYQKEDGVEVPEPLRKYMSGKEF-----LPF-QNKPSTEGKGKKPK 446
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 129/179 (72%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +TSP+ ++SW+ +EMI+NSEEFY +L I Y+VV IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWEMHEEMIKNSEEFYQELNIPYQVVAIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI-EFVHMLNAT 421
AAAKK DLE WFP S +RELVSCSNC YQSRRL +RYGQ KK NE++ ++ H+LN+T
Sbjct: 335 DAAAKKYDLEGWFPASNTYRELVSCSNCTDYQSRRLEIRYGQ-KKSNEQVKQYCHLLNST 393
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E GV +P+ LRK++ +PF + P E + KK K
Sbjct: 394 LTATERTICCILENYQKEDGVEVPEPLRKYMSGKEF-----LPF-QNKPSTEGKGKKPK 446
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DDKYLIAT+EQP+CA H D W+ + LPIRY G S+CFR+E A
Sbjct: 226 EGDDKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGA 271
>gi|168003459|ref|XP_001754430.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694532|gb|EDQ80880.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 464
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/199 (62%), Positives = 153/199 (76%), Gaps = 9/199 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+C+ HR SW+ +LPI+Y G STCFR+E GSHGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIATAEQPLCSFHRGSWMDPKALPIKYAGYSTCFRKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSP+D++SW++ +EM++NSEEFY LG+ YRVV+IVSGALN +AAKK DLEA
Sbjct: 286 EKVEQFCITSPNDNDSWEVHEEMLKNSEEFYQQLGLPYRVVSIVSGALNDSAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S +RELVSCSNC DYQSR L +RYGQ K + +T AT R +C IL
Sbjct: 346 WFPASKTYRELVSCSNCTDYQSRNLEIRYGQKKMNDQVKNYCHLLNSTLTATERTLCCIL 405
Query: 188 ETHQTETGVRIPDCLRKFV 206
E +QT GVR+P+ L+ F+
Sbjct: 406 ENYQTPDGVRVPEVLQPFM 424
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 122/151 (80%), Gaps = 2/151 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +TSP+D++SW+ +EM++NSEEFY LG+ YRVV+IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCITSPNDNDSWEVHEEMLKNSEEFYQQLGLPYRVVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE-FVHMLNAT 421
+AAKK DLEAWFP S +RELVSCSNC YQSR L +RYGQ KKMN++++ + H+LN+T
Sbjct: 335 DSAAKKYDLEAWFPASKTYRELVSCSNCTDYQSRNLEIRYGQ-KKMNDQVKNYCHLLNST 393
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFV 452
AT R +C ILE +QT GVR+P+ L+ F+
Sbjct: 394 LTATERTLCCILENYQTPDGVRVPEVLQPFM 424
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DDKYLIAT+EQP+C+ HR SW+ +LPI+Y G STCFR+E +
Sbjct: 226 EGDDKYLIATAEQPLCSFHRGSWMDPKALPIKYAGYSTCFRKEAGS 271
>gi|159467701|ref|XP_001692030.1| seryl-trna synthetase [Chlamydomonas reinhardtii]
gi|158278757|gb|EDP04520.1| seryl-trna synthetase [Chlamydomonas reinhardtii]
Length = 472
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 154/217 (70%), Gaps = 16/217 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIATSEQ +CA+HR W +A LP +Y+G STCFR+EVGSHGRDT GIFR+HQF
Sbjct: 232 EGDDKYLIATSEQTLCAMHRKGWFEKADLPTKYVGYSTCFRKEVGSHGRDTLGIFRIHQF 291
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV+ SP + SW+ ++EM+ N+E+FY LG+ YRVVNIVSG LN+AA+KK DLEA
Sbjct: 292 EKVEQFVIASPEGNASWEAMEEMLANAEDFYQSLGLPYRVVNIVSGELNNAASKKYDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----------QKIYATACATTRVICA 185
WFP S FRELVSCSNCLDYQSRRL VR K + +T AT R +C
Sbjct: 352 WFPASATFRELVSCSNCLDYQSRRLDVRLRTPKGAAAETTKSFVHMLNSTLTATERTLCC 411
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKT 222
+LE +QT GVR+PD L+ F+ V IPF KT
Sbjct: 412 VLENYQTPDGVRVPDALKPFMAGVEF-----IPFRKT 443
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 119/168 (70%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFR+HQFEKVEQFV+ SP + SW+ ++EM+ N+E+FY LG+ YRVVNIVSG LN
Sbjct: 281 DTLGIFRIHQFEKVEQFVIASPEGNASWEAMEEMLANAEDFYQSLGLPYRVVNIVSGELN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI--EFVHMLNA 420
+AA+KK DLEAWFP S FRELVSCSNCL YQSRRL VR K + FVHMLN+
Sbjct: 341 NAASKKYDLEAWFPASATFRELVSCSNCLDYQSRRLDVRLRTPKGAAAETTKSFVHMLNS 400
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 468
T AT R +C +LE +QT GVR+PD L+ F+ V IPF KT
Sbjct: 401 TLTATERTLCCVLENYQTPDGVRVPDALKPFMAGVEF-----IPFRKT 443
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTYF- 585
E DDKYLIATSEQ +CA+HR W +A LP +Y+G STCFR+E + G+ R +
Sbjct: 232 EGDDKYLIATSEQTLCAMHRKGWFEKADLPTKYVGYSTCFRKEVGSHGRDTLGIFRIHQF 291
Query: 586 ----HVTCAQREGLLS-EATSEEVDQADPFYAHCRL 616
A EG S EA E + A+ FY L
Sbjct: 292 EKVEQFVIASPEGNASWEAMEEMLANAEDFYQSLGL 327
>gi|357441653|ref|XP_003591104.1| Seryl-tRNA synthetase [Medicago truncatula]
gi|355480152|gb|AES61355.1| Seryl-tRNA synthetase [Medicago truncatula]
Length = 447
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/227 (57%), Positives = 160/227 (70%), Gaps = 15/227 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIATAEQPLCAYHSDEWIHPTRLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T+P+D++SW M +EM++NSE+FY L I Y++V+IVSGALN AAAKK DLEA
Sbjct: 286 EKVEQFCMTTPNDNDSWDMHEEMLKNSEDFYKALNIPYQIVSIVSGALNDAAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S +RELVSCSNC DYQ+R+L +RYGQ K + +T AT R IC IL
Sbjct: 346 WFPASKTYRELVSCSNCTDYQARKLEIRYGQKKSNEQLKQYVHLLNSTLTATERTICCIL 405
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +Q E GV IP+ LR F+ +PF K P +E + KK K
Sbjct: 406 ENNQNEDGVEIPEVLRPFMFGKTF-----LPF-KNQPNNEAKGKKSK 446
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 131/179 (73%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +T+P+D++SW +EM++NSE+FY L I Y++V+IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCMTTPNDNDSWDMHEEMLKNSEDFYKALNIPYQIVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI-EFVHMLNAT 421
AAAKK DLEAWFP S +RELVSCSNC YQ+R+L +RYGQ KK NE++ ++VH+LN+T
Sbjct: 335 DAAAKKYDLEAWFPASKTYRELVSCSNCTDYQARKLEIRYGQ-KKSNEQLKQYVHLLNST 393
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E GV IP+ LR F+ +PF K P +E + KK K
Sbjct: 394 LTATERTICCILENNQNEDGVEIPEVLRPFMFGKTF-----LPF-KNQPNNEAKGKKSK 446
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E
Sbjct: 226 EGDDKYLIATAEQPLCAYHSDEWIHPTRLPLRYAGYSSCFRKEA 269
>gi|225450981|ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vinifera]
gi|296088317|emb|CBI36762.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/227 (58%), Positives = 159/227 (70%), Gaps = 15/227 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ + LP+RY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIATAEQPLCAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSP+ ++SW M +EMI+NSE+FY L I Y+VV IVSGALN AAAKK DLE
Sbjct: 286 EKVEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEG 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S +RELVSCSNC DYQSRRL +RYGQ K + +T AT R IC IL
Sbjct: 346 WFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQIKQYVHLLNSTLTATERTICCIL 405
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +Q E GV +P+ LR F+ +PF +T+P E + KK K
Sbjct: 406 ENYQKEDGVEVPEPLRPFMGGKTF-----LPF-QTSPATEAKGKKSK 446
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 129/179 (72%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +TSP+ ++SW +EMI+NSE+FY L I Y+VV IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI-EFVHMLNAT 421
AAAKK DLE WFP S +RELVSCSNC YQSRRL +RYGQ KK NE+I ++VH+LN+T
Sbjct: 335 DAAAKKYDLEGWFPASQTYRELVSCSNCTDYQSRRLEIRYGQ-KKSNEQIKQYVHLLNST 393
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E GV +P+ LR F+ +PF +T+P E + KK K
Sbjct: 394 LTATERTICCILENYQKEDGVEVPEPLRPFMGGKTF-----LPF-QTSPATEAKGKKSK 446
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DDKYLIAT+EQP+CA H D W+ + LP+RY G S+CFR+E +
Sbjct: 226 EGDDKYLIATAEQPLCAYHLDDWIHPSQLPLRYAGYSSCFRKEAGS 271
>gi|302892399|ref|XP_003045081.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726006|gb|EEU39368.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 471
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/232 (56%), Positives = 162/232 (69%), Gaps = 19/232 (8%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+YLIATSEQP+ A+H D W+ LPI+Y G STCFR+E GSHGRD G+FRVHQFEKV
Sbjct: 236 DRYLIATSEQPLSALHADEWIQPTELPIKYCGYSTCFRKEAGSHGRDAWGVFRVHQFEKV 295
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQFVL P D+SW D+M+ NSEEFY LG+ Y+VV IV+GALN+AAAKK DLEAWFP
Sbjct: 296 EQFVLCGP--DDSWDHFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAAKKYDLEAWFP 353
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------------IYATACATTRVICAI 186
++ELVSCSNC DYQ+R L +R+G K K + AT CAT R +C I
Sbjct: 354 FQSEYKELVSCSNCTDYQTRELEIRHGSKKGKQIVGGGKKEYVHALNATLCATERTMCCI 413
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKE 238
LE +QTE G+ +P+ LRK++P E +PFVK AP D E+T+K+ +KE
Sbjct: 414 LENYQTEEGLVVPEVLRKYIPG----EPEFLPFVKEAPKDSEKTEKKDGKKE 461
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 133/193 (68%), Gaps = 14/193 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEKVEQFVL P D+SW D+M+ NSEEFY LG+ Y+VV IV+GALN
Sbjct: 282 DAWGVFRVHQFEKVEQFVLCGP--DDSWDHFDQMMANSEEFYKSLGLPYQVVGIVTGALN 339
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKM----NEKIEFVHML 418
+AAAKK DLEAWFP ++ELVSCSNC YQ+R L +R+G K K E+VH L
Sbjct: 340 NAAAKKYDLEAWFPFQSEYKELVSCSNCTDYQTRELEIRHGSKKGKQIVGGGKKEYVHAL 399
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
NAT CAT R +C ILE +QTE G+ +P+ LRK++P E +PFVK AP D E+T+K
Sbjct: 400 NATLCATERTMCCILENYQTEEGLVVPEVLRKYIPG----EPEFLPFVKEAPKDSEKTEK 455
Query: 479 QKKQKEGMKKKVL 491
K+G K+K L
Sbjct: 456 ----KDGKKEKAL 464
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+YLIATSEQP+ A+H D W+ LPI+Y G STCFR+E +
Sbjct: 236 DRYLIATSEQPLSALHADEWIQPTELPIKYCGYSTCFRKEAGS 278
>gi|171692755|ref|XP_001911302.1| hypothetical protein [Podospora anserina S mat+]
gi|170946326|emb|CAP73127.1| unnamed protein product [Podospora anserina S mat+]
Length = 450
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/218 (61%), Positives = 154/218 (70%), Gaps = 15/218 (6%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A H D WL LP++Y G STCFR+E G+HGRD GIFRVH+F KV
Sbjct: 232 DKYLIATSEQPISAFHSDEWLQSKDLPLKYAGYSTCFRKEAGAHGRDVWGIFRVHEFTKV 291
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF LT P ++SW+M D+MI NSEEFY LGI YRVV IVSGALN+AA+KKLDLEAWFP
Sbjct: 292 EQFCLTDP--EKSWEMFDQMIANSEEFYKSLGIPYRVVAIVSGALNNAASKKLDLEAWFP 349
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAILETH 190
G F+ELVSCSNC DYQSR L +R+G KQ K Y +T ATTR ICAILE
Sbjct: 350 HQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTEIKKTYVHALNSTLTATTRTICAILENF 409
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
QTE GV+IP+ LRK++P IPF A EE
Sbjct: 410 QTEDGVKIPEPLRKYLPGA----PDFIPFPGKAKKAEE 443
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 121/172 (70%), Gaps = 6/172 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH+F KVEQF LT P ++SW+ D+MI NSEEFY LGI YRVV IVSGALN
Sbjct: 278 DVWGIFRVHEFTKVEQFCLTDP--EKSWEMFDQMIANSEEFYKSLGIPYRVVAIVSGALN 335
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFP G F+ELVSCSNC YQSR L +R+G K+ K +VH LN+T
Sbjct: 336 NAASKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTEIKKTYVHALNSTL 395
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
ATTR ICAILE QTE GV+IP+ LRK++P IPF A EE
Sbjct: 396 TATTRTICAILENFQTEDGVKIPEPLRKYLPGA----PDFIPFPGKAKKAEE 443
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A H D WL LP++Y G STCFR+E A
Sbjct: 232 DKYLIATSEQPISAFHSDEWLQSKDLPLKYAGYSTCFRKEAGA 274
>gi|297812971|ref|XP_002874369.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
gi|297320206|gb|EFH50628.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 163/229 (71%), Gaps = 18/229 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 229 EGDDKYLIATAEQPLCAYHLDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 288
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +T P+++ SW+MLDEM++NSE+FY L + Y++V+IVSGALN AAAKK DLEA
Sbjct: 289 EKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEA 348
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG------QTKQKIY---ATACATTRVICAIL 187
WFP S FRELVSCSNC DYQ+RRL +RYG QTKQ ++ +T AT R IC IL
Sbjct: 349 WFPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCIL 408
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGE--IPFVKTAPIDEEETKKQK 234
E +Q E GV IP+ L+ F+ GE +PF + + + KK K
Sbjct: 409 ENYQREDGVDIPEVLQPFM-------GGETFLPFKAKPVVADTKGKKSK 450
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 9/180 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P+++ SW+ LDEM++NSE+FY L + Y++V+IVSGALN
Sbjct: 278 DTLGIFRVHQFEKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S FRELVSCSNC YQ+RRL +RYGQ K + ++VHMLN+T
Sbjct: 338 DAAAKKYDLEAWFPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE--IPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E GV IP+ L+ F+ GE +PF + + + KK K
Sbjct: 398 TATERTICCILENYQREDGVDIPEVLQPFM-------GGETFLPFKAKPVVADTKGKKSK 450
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E
Sbjct: 229 EGDDKYLIATAEQPLCAYHLDEWIHPTELPLRYAGYSSCFRKEA 272
>gi|148910656|gb|ABR18398.1| unknown [Picea sitchensis]
Length = 466
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/227 (56%), Positives = 159/227 (70%), Gaps = 15/227 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA HR W+ +LPIRY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIATAEQPLCAYHRGDWIHPTTLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSP+ +SW M +EMI+NSE+FY +L I Y++V+IVSGALN AAAKK DLEA
Sbjct: 286 EKVEQFCITSPNGKDSWDMHEEMIKNSEDFYKELNIPYQIVSIVSGALNDAAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S A+RELVSCSNC D+QSR + +RYGQ K + +T AT R IC IL
Sbjct: 346 WFPASKAYRELVSCSNCTDFQSRNMEIRYGQKKSNEQVKQYVHLLNSTLSATERTICCIL 405
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +Q E G+ IP LR F+ + +PF + + E + KK K
Sbjct: 406 ENNQKEGGIEIPKVLRPFMLDIDF-----LPF-QNGSLKESKAKKTK 446
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 129/179 (72%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +TSP+ +SW +EMI+NSE+FY +L I Y++V+IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCITSPNGKDSWDMHEEMIKNSEDFYKELNIPYQIVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI-EFVHMLNAT 421
AAAKK DLEAWFP S A+RELVSCSNC +QSR + +RYGQ KK NE++ ++VH+LN+T
Sbjct: 335 DAAAKKYDLEAWFPASKAYRELVSCSNCTDFQSRNMEIRYGQ-KKSNEQVKQYVHLLNST 393
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E G+ IP LR F+ + +PF + + E + KK K
Sbjct: 394 LSATERTICCILENNQKEGGIEIPKVLRPFMLDIDF-----LPF-QNGSLKESKAKKTK 446
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDKYLIAT+EQP+CA HR W+ +LPIRY G S+CFR+E
Sbjct: 226 EGDDKYLIATAEQPLCAYHRGDWIHPTTLPIRYAGYSSCFRKEA 269
>gi|15240939|ref|NP_198099.1| seryl-tRNA synthetase [Arabidopsis thaliana]
gi|2501056|sp|Q39230.1|SYS_ARATH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|13507571|gb|AAK28648.1|AF360352_1 putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|1359497|emb|CAA94388.1| seryl-tRNA Synthetase [Arabidopsis thaliana]
gi|15293241|gb|AAK93731.1| putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332006309|gb|AED93692.1| seryl-tRNA synthetase [Arabidopsis thaliana]
Length = 451
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 163/229 (71%), Gaps = 18/229 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 229 EGDDKYLIATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 288
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +T P+++ SW+MLDEM++NSE+FY L + Y++V+IVSGALN AAAKK DLEA
Sbjct: 289 EKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEA 348
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG------QTKQKIY---ATACATTRVICAIL 187
WFP S FRELVSCSNC DYQ+RRL +RYG QTKQ ++ +T AT R IC IL
Sbjct: 349 WFPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCIL 408
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGE--IPFVKTAPIDEEETKKQK 234
E +Q E GV IP+ L+ F+ GE +PF + + + KK K
Sbjct: 409 ENYQREDGVDIPEVLQPFM-------GGETFLPFKAKPVVADTKGKKSK 450
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 9/180 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P+++ SW+ LDEM++NSE+FY L + Y++V+IVSGALN
Sbjct: 278 DTLGIFRVHQFEKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S FRELVSCSNC YQ+RRL +RYGQ K + ++VHMLN+T
Sbjct: 338 DAAAKKYDLEAWFPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE--IPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E GV IP+ L+ F+ GE +PF + + + KK K
Sbjct: 398 TATERTICCILENYQREDGVDIPEVLQPFM-------GGETFLPFKAKPVVADTKGKKSK 450
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E
Sbjct: 229 EGDDKYLIATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEA 272
>gi|330805610|ref|XP_003290773.1| hypothetical protein DICPUDRAFT_49409 [Dictyostelium purpureum]
gi|325079086|gb|EGC32704.1| hypothetical protein DICPUDRAFT_49409 [Dictyostelium purpureum]
Length = 443
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 139/237 (58%), Positives = 165/237 (69%), Gaps = 27/237 (11%)
Query: 8 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDT 67
VG +A E++E KYLIATSEQPI A HR WL E LP RY+G STCFR+E GS GRDT
Sbjct: 225 VGGAAGEENE---KYLIATSEQPISAFHRGEWLDEKELPKRYVGYSTCFRKEAGSSGRDT 281
Query: 68 RGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHA 127
GIFRVHQFEK+EQF +T P ++SW M++EMI NSE+FY +LGI YRVVNIVSGALN+A
Sbjct: 282 WGIFRVHQFEKIEQFCVTEP--EKSWDMMEEMISNSEQFYQELGIPYRVVNIVSGALNNA 339
Query: 128 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACA 178
A+KK DLE WFPG +RELVSCSNC DYQSR L +R G KQ + +T A
Sbjct: 340 ASKKYDLEGWFPGYNTYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAA 399
Query: 179 TTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
TTRVIC ILE +QTE G+ +P+ LR F+ + IPFVK+ P KQKK
Sbjct: 400 TTRVICCILENYQTEGGITVPEPLRPFLGKDF------IPFVKSKP-------KQKK 443
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 129/179 (72%), Gaps = 15/179 (8%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P ++SW ++EMI NSE+FY +LGI YRVVNIVSGALN
Sbjct: 280 DTWGIFRVHQFEKIEQFCVTEP--EKSWDMMEEMISNSEQFYQELGIPYRVVNIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLE WFPG +RELVSCSNC YQSR L +R G K+ ++ ++VHMLN+T
Sbjct: 338 NAASKKYDLEGWFPGYNTYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
ATTRVIC ILE +QTE G+ +P+ LR F+ + IPFVK+ P KQKK
Sbjct: 398 AATTRVICCILENYQTEGGITVPEPLRPFLGKDF------IPFVKSKP-------KQKK 443
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 524 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
VG +A E++E KYLIATSEQPI A HR WL E LP RY+G STCFR+E +
Sbjct: 225 VGGAAGEENE---KYLIATSEQPISAFHRGEWLDEKELPKRYVGYSTCFRKEAGS 276
>gi|307108989|gb|EFN57228.1| hypothetical protein CHLNCDRAFT_56101 [Chlorella variabilis]
Length = 424
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 156/217 (71%), Gaps = 16/217 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E ++KYLIATSEQ +CA+HR W + LPI+Y+G STCFR+E GSHGRDT GIFRVHQF
Sbjct: 185 EGEEKYLIATSEQTLCAMHRRDWFDKQQLPIKYIGYSTCFRKEAGSHGRDTLGIFRVHQF 244
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV+ SPHDD+SW L+EMI N+E FY LG YRVVNIVSGALN AAAKK DLEA
Sbjct: 245 EKVEQFVIASPHDDDSWVALEEMIANAEAFYQALGFPYRVVNIVSGALNDAAAKKYDLEA 304
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQK----IYATACATTRVICA 185
WFP S A+RELVSCSNC DYQ+RRL +R G++K++ + T AT R +C
Sbjct: 305 WFPASRAYRELVSCSNCTDYQARRLDIRLRSAKGPGGESKKEYVHMLNGTLSATERTLCC 364
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKT 222
+LE +QT GVR+P+ L+ F+ + IPF K
Sbjct: 365 LLENYQTADGVRVPEALQPFMMGIDF-----IPFKKA 396
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 118/168 (70%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFV+ SPHDD+SW L+EMI N+E FY LG YRVVNIVSGALN
Sbjct: 234 DTLGIFRVHQFEKVEQFVIASPHDDDSWVALEEMIANAEAFYQALGFPYRVVNIVSGALN 293
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMN--EKIEFVHMLNA 420
AAAKK DLEAWFP S A+RELVSCSNC YQ+RRL +R K K E+VHMLN
Sbjct: 294 DAAAKKYDLEAWFPASRAYRELVSCSNCTDYQARRLDIRLRSAKGPGGESKKEYVHMLNG 353
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 468
T AT R +C +LE +QT GVR+P+ L+ F+ + IPF K
Sbjct: 354 TLSATERTLCCLLENYQTADGVRVPEALQPFMMGIDF-----IPFKKA 396
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E ++KYLIATSEQ +CA+HR W + LPI+Y+G STCFR+E
Sbjct: 185 EGEEKYLIATSEQTLCAMHRRDWFDKQQLPIKYIGYSTCFRKEA 228
>gi|290990879|ref|XP_002678063.1| seryl-tRNA synthetase [Naegleria gruberi]
gi|284091674|gb|EFC45319.1| seryl-tRNA synthetase [Naegleria gruberi]
Length = 474
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 157/208 (75%), Gaps = 17/208 (8%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E +DKYLIATSEQPI A H D E+ LP++Y G+STCFR+EVG+HG+DT GIFRVHQF
Sbjct: 264 EGEDKYLIATSEQPIAAFHLDKRFDESELPLKYCGMSTCFRKEVGAHGKDTLGIFRVHQF 323
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFV+TSP D++SW+M ++MI NSE FY LG++YRVVNIVSGALN+AAAKKLDLEA
Sbjct: 324 EKIEQFVVTSPKDNKSWEMFEDMIGNSEAFYQSLGLSYRVVNIVSGALNNAAAKKLDLEA 383
Query: 137 WFPGS---GAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICA 185
WFPG+ +RELVSCSNC DYQ+RRL VRYG+ K + +T AT+R IC
Sbjct: 384 WFPGAEEGNEYRELVSCSNCTDYQARRLNVRYGKAATKGDAEFCHMLNSTLSATSRTICC 443
Query: 186 ILETHQTETGVRIPDCLR------KFVP 207
I+E +QT GV IP+ L+ KF+P
Sbjct: 444 IVENYQTPEGVNIPEVLQPYMGGTKFIP 471
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/160 (61%), Positives = 121/160 (75%), Gaps = 10/160 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQFV+TSP D++SW+ ++MI NSE FY LG++YRVVNIVSGALN
Sbjct: 313 DTLGIFRVHQFEKIEQFVVTSPKDNKSWEMFEDMIGNSEAFYQSLGLSYRVVNIVSGALN 372
Query: 363 HAAAKKLDLEAWFPGS---GAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+AAAKKLDLEAWFPG+ +RELVSCSNC YQ+RRL VRYG+ + EF HMLN
Sbjct: 373 NAAAKKLDLEAWFPGAEEGNEYRELVSCSNCTDYQARRLNVRYGKAATKGDA-EFCHMLN 431
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLR------KFVP 453
+T AT+R IC I+E +QT GV IP+ L+ KF+P
Sbjct: 432 STLSATSRTICCIVENYQTPEGVNIPEVLQPYMGGTKFIP 471
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E +DKYLIATSEQPI A H D E+ LP++Y G+STCFR+E A
Sbjct: 264 EGEDKYLIATSEQPIAAFHLDKRFDESELPLKYCGMSTCFRKEVGA 309
>gi|255546678|ref|XP_002514398.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223546495|gb|EEF47994.1| seryl-tRNA synthetase, putative [Ricinus communis]
Length = 447
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/227 (57%), Positives = 157/227 (69%), Gaps = 15/227 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E +DKYLIAT+EQP+CA H D W+ + LPIRY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 226 EGEDKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSP+ ++SW M +EMI+NSE+FY L I Y+VV IVSGALN AAAKK DLEA
Sbjct: 286 EKVEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S +RELVSCSNC DYQSR+L +RYGQ K + +T AT R +C IL
Sbjct: 346 WFPASNTYRELVSCSNCTDYQSRKLEIRYGQKKNNEQAKQYVHLLNSTLTATERTLCCIL 405
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +Q E GV IP+ LR Y+ +PF P E + KK K
Sbjct: 406 ENYQKENGVEIPEPLRG-----YMGGKSFLPFQNNPPT-EGKGKKSK 446
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 123/178 (69%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +TSP+ ++SW +EMI+NSE+FY L I Y+VV IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S +RELVSCSNC YQSR+L +RYGQ K + ++VH+LN+T
Sbjct: 335 DAAAKKYDLEAWFPASNTYRELVSCSNCTDYQSRKLEIRYGQKKNNEQAKQYVHLLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R +C ILE +Q E GV IP+ LR Y+ +PF P E + KK K
Sbjct: 395 TATERTLCCILENYQKENGVEIPEPLRG-----YMGGKSFLPFQNNPPT-EGKGKKSK 446
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E +DKYLIAT+EQP+CA H D W+ + LPIRY G S+CFR+E
Sbjct: 226 EGEDKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEA 269
>gi|400596161|gb|EJP63945.1| putative serine-tRNA ligase, cytosolic [Beauveria bassiana ARSEF
2860]
Length = 457
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 165/233 (70%), Gaps = 17/233 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
DE +DKYLIATSEQPI A H D WL LPI+Y G STC+R+E GSHGRD GI+RVHQ
Sbjct: 230 DEANDKYLIATSEQPISAFHADEWLIAKDLPIKYAGYSTCYRREAGSHGRDAWGIYRVHQ 289
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEKVEQFVLT P ++SW+ +EMI SEEFY LG+ Y+V+ IVSGALN+AAAKKLDLE
Sbjct: 290 FEKVEQFVLTDP--EKSWEAFEEMIGVSEEFYQTLGLPYQVIAIVSGALNNAAAKKLDLE 347
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYG---QTKQK------IYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +R+G QT K + +T CATTR +C +
Sbjct: 348 AWFPHQGEYKELVSCSNCTDYQSRALDIRFGAKTQTDAKKKYVHCLNSTLCATTRTLCCV 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQKE 238
LE +QT+ G+R+P+ LRK++P A E IPF + P + KK Q+E
Sbjct: 408 LENYQTDEGLRVPEPLRKYLPG-----APEFIPFARDLPKEAAGVKKTLPQRE 455
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 131/183 (71%), Gaps = 8/183 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GI+RVHQFEKVEQFVLT P ++SW+ +EMI SEEFY LG+ Y+V+ IVSGALN
Sbjct: 280 DAWGIYRVHQFEKVEQFVLTDP--EKSWEAFEEMIGVSEEFYQTLGLPYQVIAIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP G ++ELVSCSNC YQSR L +R+G + + K ++VH LN+T
Sbjct: 338 NAAAKKLDLEAWFPHQGEYKELVSCSNCTDYQSRALDIRFGAKTQTDAKKKYVHCLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CATTR +C +LE +QT+ G+R+P+ LRK++P A E IPF + P + KK
Sbjct: 398 CATTRTLCCVLENYQTDEGLRVPEPLRKYLPG-----APEFIPFARDLPKEAAGVKKTLP 452
Query: 482 QKE 484
Q+E
Sbjct: 453 QRE 455
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DE +DKYLIATSEQPI A H D WL LPI+Y G STC+R+E
Sbjct: 230 DEANDKYLIATSEQPISAFHADEWLIAKDLPIKYAGYSTCYRREA 274
>gi|452822659|gb|EME29676.1| seryl-tRNA synthetase [Galdieria sulphuraria]
Length = 512
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 152/201 (75%), Gaps = 9/201 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
+KYLIATSEQPIC H + WL +LP+RY+G STCFR+E GSHGRDT GIFRVHQFEK+
Sbjct: 281 EKYLIATSEQPICCYHMNEWLDPKTLPLRYVGFSTCFRKETGSHGRDTLGIFRVHQFEKL 340
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T+P S+ M++EM+ +EEFY L I YRVVNIVSGALN+AAAKK DLE WFP
Sbjct: 341 EQFCITAPDPAVSYAMMEEMMHVAEEFYQSLNIPYRVVNIVSGALNNAAAKKYDLEGWFP 400
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAILETH 190
S AFRELVSCSNC DYQ+RRL VRYG K +K Y +T CATTRVIC ILE +
Sbjct: 401 ASSAFRELVSCSNCTDYQARRLEVRYGLKKMGDREKKYVHMLNSTLCATTRVICCILENY 460
Query: 191 QTETGVRIPDCLRKFVPAVYL 211
QT G+++P+ L+ FV + +L
Sbjct: 461 QTADGIKVPEVLQPFVGSSFL 481
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 119/155 (76%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T+P S+ ++EM+ +EEFY L I YRVVNIVSGALN
Sbjct: 327 DTLGIFRVHQFEKLEQFCITAPDPAVSYAMMEEMMHVAEEFYQSLNIPYRVVNIVSGALN 386
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE WFP S AFRELVSCSNC YQ+RRL VRYG K + + ++VHMLN+T
Sbjct: 387 NAAAKKYDLEGWFPASSAFRELVSCSNCTDYQARRLEVRYGLKKMGDREKKYVHMLNSTL 446
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
CATTRVIC ILE +QT G+++P+ L+ FV + ++
Sbjct: 447 CATTRVICCILENYQTADGIKVPEVLQPFVGSSFL 481
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+KYLIATSEQPIC H + WL +LP+RY+G STCFR+E +
Sbjct: 281 EKYLIATSEQPICCYHMNEWLDPKTLPLRYVGFSTCFRKETGS 323
>gi|407926016|gb|EKG18987.1| hypothetical protein MPH_03677 [Macrophomina phaseolina MS6]
Length = 477
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/227 (55%), Positives = 157/227 (69%), Gaps = 15/227 (6%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E ++ DKYLIATSEQP+ A+H + WL A LPI+Y G STCFR+E GSHGRD GIFRV
Sbjct: 230 ENNKSTDKYLIATSEQPLSALHSEEWLKPAELPIKYAGYSTCFRKEAGSHGRDAWGIFRV 289
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEK+EQF++T P DESW D MI+ SEEFY L + Y+VV IVSGALN+AA+KK D
Sbjct: 290 HQFEKIEQFLITKP--DESWAAFDSMIETSEEFYKSLNLPYQVVAIVSGALNNAASKKFD 347
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LEAWFP G ++ELVSCSNC DYQ+R L +RYG KQ + +T AT R +C
Sbjct: 348 LEAWFPFQGEYKELVSCSNCTDYQTRELEIRYGTKKQTAARKEYVHALNSTLAATERCLC 407
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
ILE +QTE G+R+P+ LRK++P + +PFV+ P D K
Sbjct: 408 CILENYQTEDGLRVPEVLRKYIPG----QPEFLPFVRELPKDTTSAK 450
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 127/188 (67%), Gaps = 7/188 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF++T P DESW D MI+ SEEFY L + Y+VV IVSGALN
Sbjct: 282 DAWGIFRVHQFEKIEQFLITKP--DESWAAFDSMIETSEEFYKSLNLPYQVVAIVSGALN 339
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQ+R L +RYG K+ + E+VH LN+T
Sbjct: 340 NAASKKFDLEAWFPFQGEYKELVSCSNCTDYQTRELEIRYGTKKQTAARKEYVHALNSTL 399
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
AT R +C ILE +QTE G+R+P+ LRK++P + +PFV+ P D K K
Sbjct: 400 AATERCLCCILENYQTEDGLRVPEVLRKYIPG----QPEFLPFVRELPKDTTSAKTAGKA 455
Query: 483 KEGMKKKV 490
G K KV
Sbjct: 456 P-GPKPKV 462
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E ++ DKYLIATSEQP+ A+H + WL A LPI+Y G STCFR+E
Sbjct: 230 ENNKSTDKYLIATSEQPLSALHSEEWLKPAELPIKYAGYSTCFRKEA 276
>gi|242794649|ref|XP_002482418.1| seryl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
gi|218719006|gb|EED18426.1| seryl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
Length = 467
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/228 (55%), Positives = 161/228 (70%), Gaps = 14/228 (6%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H + WL ++ LP++Y G STC+R+E GSHG+D GIFRVH
Sbjct: 230 EDKETDKYLIATSEQPLSALHSEEWLIDSDLPVKYAGYSTCYRKEAGSHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT P D+SW+ DEMI SEEFY LG+ Y+VV+IVSGALN+AAAKK DL
Sbjct: 290 QFEKIEQFVLTKP--DKSWEAFDEMIATSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---QKIY-----ATACATTRVICAI 186
EAWFP G ++ELVSCSNC DYQ+R L +RYG K +K Y AT CAT R +C I
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQTRELEIRYGAKKADAKKSYVHALNATLCATERTLCCI 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
LE +QTE G+ +P L+K++P +P+ + P D KK K
Sbjct: 408 LENYQTEDGINVPAPLQKYIPGA----PTFLPYTRELPKDTTSAKKGK 451
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 124/178 (69%), Gaps = 7/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P D+SW+ DEMI SEEFY LG+ Y+VV+IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVLTKP--DKSWEAFDEMIATSEEFYKSLGLPYQVVSIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQ+R L +RYG KK + K +VH LNAT
Sbjct: 339 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQTRELEIRYG-AKKADAKKSYVHALNATL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
CAT R +C ILE +QTE G+ +P L+K++P +P+ + P D KK K
Sbjct: 398 CATERTLCCILENYQTEDGINVPAPLQKYIPGA----PTFLPYTRELPKDTTSAKKGK 451
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ DKYLIATSEQP+ A+H + WL ++ LP++Y G STC+R+E
Sbjct: 230 EDKETDKYLIATSEQPLSALHSEEWLIDSDLPVKYAGYSTCYRKEA 275
>gi|212536014|ref|XP_002148163.1| seryl-tRNA synthetase [Talaromyces marneffei ATCC 18224]
gi|210070562|gb|EEA24652.1| seryl-tRNA synthetase [Talaromyces marneffei ATCC 18224]
Length = 466
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 164/238 (68%), Gaps = 14/238 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H + W EA LP++Y G STC+R+E GSHG+D GIFRVH
Sbjct: 230 EDKDTDKYLIATSEQPLSALHSEEWFQEADLPLKYAGFSTCYRKEAGSHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT+P ++SW+ D+MI SEEFY LG+ Y+VV+IVSGALN+AAAKK DL
Sbjct: 290 QFEKIEQFVLTNP--EKSWEAFDDMIATSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---QKIY-----ATACATTRVICAI 186
EAWFP G ++ELVSCSNC DYQ+R L +RYG K +K Y AT CAT R +C I
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQTRELEIRYGAKKADSKKAYVHALNATLCATERTLCCI 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKL 244
LE +QTE G +P L+K++P +P+ + P D KK K G K+L
Sbjct: 408 LENYQTEDGFNVPAPLQKYIPGA----PTFLPYTRELPKDTTSAKKGKGGVAGAAKQL 461
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 128/188 (68%), Gaps = 7/188 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT+P ++SW+ D+MI SEEFY LG+ Y+VV+IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVLTNP--EKSWEAFDDMIATSEEFYKSLGLPYQVVSIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQ+R L +RYG KK + K +VH LNAT
Sbjct: 339 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQTRELEIRYG-AKKADSKKAYVHALNATL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +QTE G +P L+K++P +P+ + P D KK K
Sbjct: 398 CATERTLCCILENYQTEDGFNVPAPLQKYIPGAPTF----LPYTRELPKDTTSAKKGKGG 453
Query: 483 KEGMKKKV 490
G K++
Sbjct: 454 VAGAAKQL 461
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ DKYLIATSEQP+ A+H + W EA LP++Y G STC+R+E
Sbjct: 230 EDKDTDKYLIATSEQPLSALHSEEWFQEADLPLKYAGFSTCYRKEA 275
>gi|297791595|ref|XP_002863682.1| hypothetical protein ARALYDRAFT_331078 [Arabidopsis lyrata subsp.
lyrata]
gi|297309517|gb|EFH39941.1| hypothetical protein ARALYDRAFT_331078 [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 156/220 (70%), Gaps = 24/220 (10%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIG+G+ D+KYLIATSEQP+CA H++ W+ + LPIRY G STCFR+E
Sbjct: 216 VIGEGDH-----------DEKYLIATSEQPLCAYHQNEWIQPSELPIRYAGYSTCFRKEA 264
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDT GIF VHQFEKVEQF +TSP+D SW+MLDEM+ NSEEFY L I YRVV+ V
Sbjct: 265 GSHGRDTLGIFHVHQFEKVEQFCITSPND--SWEMLDEMLNNSEEFYQSLKIPYRVVSDV 322
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-------QTKQK-- 171
SGALN+AAAKK DLE WFP S +RELVSCSNC DYQSRRL +RYG QTK K
Sbjct: 323 SGALNNAAAKKYDLEGWFPSSETYRELVSCSNCTDYQSRRLRIRYGHKKSNDQQTKNKYV 382
Query: 172 --IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 209
+ +T AT R IC ILE +Q E GV IP+ L+ F+ V
Sbjct: 383 HMLNSTLTATQRTICCILENYQREDGVDIPEVLQPFMGGV 422
Score = 196 bits (498), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 115/155 (74%), Gaps = 4/155 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIF VHQFEKVEQF +TSP+D SW+ LDEM+ NSEEFY L I YRVV+ VSGALN
Sbjct: 270 DTLGIFHVHQFEKVEQFCITSPND--SWEMLDEMLNNSEEFYQSLKIPYRVVSDVSGALN 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE--KIEFVHMLNA 420
+AAAKK DLE WFP S +RELVSCSNC YQSRRL +RYG K ++ K ++VHMLN+
Sbjct: 328 NAAAKKYDLEGWFPSSETYRELVSCSNCTDYQSRRLRIRYGHKKSNDQQTKNKYVHMLNS 387
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
T AT R IC ILE +Q E GV IP+ L+ F+ V
Sbjct: 388 TLTATQRTICCILENYQREDGVDIPEVLQPFMGGV 422
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 11/62 (17%)
Query: 514 LREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
L +VIG+G+ D+KYLIATSEQP+CA H++ W+ + LPIRY G STCFR
Sbjct: 213 LYKVIGEGDH-----------DEKYLIATSEQPLCAYHQNEWIQPSELPIRYAGYSTCFR 261
Query: 574 QE 575
+E
Sbjct: 262 KE 263
>gi|297852062|ref|XP_002893912.1| hypothetical protein ARALYDRAFT_314052 [Arabidopsis lyrata subsp.
lyrata]
gi|297339754|gb|EFH70171.1| hypothetical protein ARALYDRAFT_314052 [Arabidopsis lyrata subsp.
lyrata]
Length = 441
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/200 (62%), Positives = 147/200 (73%), Gaps = 11/200 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+K+LIAT+EQP+CA H+ W LPIRY G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 230 DEKFLIATAEQPLCAQHQGEWFHPTELPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEK 289
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF +T P D+SW+ML+EM++NSEEFY L I YRVV++VSGALN AAAKK DLE WF
Sbjct: 290 VEQFCITGP--DDSWEMLEEMLKNSEEFYQSLKIPYRVVSVVSGALNDAAAKKYDLEGWF 347
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P SG +RELVSCSNC DYQSRRL +RYG K + +T CAT R IC ILE
Sbjct: 348 PASGTYRELVSCSNCTDYQSRRLNIRYGYKKSNQETRKYVHMLNSTLCATQRTICCILEN 407
Query: 190 HQTETGVRIPDCLRKFVPAV 209
+Q + GV IP+ L+ F+ V
Sbjct: 408 YQRDDGVDIPEVLQPFMAGV 427
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 116/153 (75%), Gaps = 2/153 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +T P D+SW+ L+EM++NSEEFY L I YRVV++VSGALN
Sbjct: 277 DTLGIFRVHQFEKVEQFCITGP--DDSWEMLEEMLKNSEEFYQSLKIPYRVVSVVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLE WFP SG +RELVSCSNC YQSRRL +RYG K E ++VHMLN+T
Sbjct: 335 DAAAKKYDLEGWFPASGTYRELVSCSNCTDYQSRRLNIRYGYKKSNQETRKYVHMLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
CAT R IC ILE +Q + GV IP+ L+ F+ V
Sbjct: 395 CATQRTICCILENYQRDDGVDIPEVLQPFMAGV 427
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+K+LIAT+EQP+CA H+ W LPIRY G STCFR+E +
Sbjct: 230 DEKFLIATAEQPLCAQHQGEWFHPTELPIRYAGYSTCFRKEAGS 273
>gi|384250035|gb|EIE23515.1| serine-tRNA ligase [Coccomyxa subellipsoidea C-169]
Length = 449
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 154/218 (70%), Gaps = 16/218 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIATSEQP+CA+HR W E+ LP++Y+G STCFR+E GSHGRDT GIFR+HQF
Sbjct: 226 EGDDKYLIATSEQPLCAMHRKLWFEESQLPLKYIGYSTCFRKEAGSHGRDTLGIFRIHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSP +D SW L+EM+ N+E+FY L + Y VVNIVSG LN+AAAKK DLEA
Sbjct: 286 EKVEQFFVTSPDNDASWAALEEMLTNAEDFYQALEVPYHVVNIVSGELNNAAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYA-----TACATTRVIC 184
WFP S +RELVSCSNC DYQ+RRL VR K +K Y T AT R +C
Sbjct: 346 WFPASKKYRELVSCSNCTDYQARRLEVRMRTPKVPGSDLNRKEYVHMLNCTLSATERTLC 405
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKT 222
+LE +QT GVR+P L+KF+P E IPF KT
Sbjct: 406 CLLENYQTPDGVRVPKVLQKFMPG----ELDFIPFRKT 439
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 119/170 (70%), Gaps = 9/170 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFR+HQFEKVEQF +TSP +D SW L+EM+ N+E+FY L + Y VVNIVSG LN
Sbjct: 275 DTLGIFRIHQFEKVEQFFVTSPDNDASWAALEEMLTNAEDFYQALEVPYHVVNIVSGELN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTK----KMNEKIEFVHML 418
+AAAKK DLEAWFP S +RELVSCSNC YQ+RRL VR K +N K E+VHML
Sbjct: 335 NAAAKKYDLEAWFPASKKYRELVSCSNCTDYQARRLEVRMRTPKVPGSDLNRK-EYVHML 393
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKT 468
N T AT R +C +LE +QT GVR+P L+KF+P E IPF KT
Sbjct: 394 NCTLSATERTLCCLLENYQTPDGVRVPKVLQKFMPG----ELDFIPFRKT 439
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDKYLIATSEQP+CA+HR W E+ LP++Y+G STCFR+E
Sbjct: 226 EGDDKYLIATSEQPLCAMHRKLWFEESQLPLKYIGYSTCFRKEA 269
>gi|66823277|ref|XP_644993.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|75009955|sp|Q7KWQ2.1|SYSC_DICDI RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|60473019|gb|EAL70967.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 451
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/215 (59%), Positives = 155/215 (72%), Gaps = 17/215 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQPI A H+D W+ E LP +Y+G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 229 EEKYLIATSEQPISAFHQDEWIEEKDLPKKYVGYSTCFRKEAGSHGRDTWGIFRVHQFEK 288
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +T P ++SW M++EMI NSE+FY +LGI YRVVNIVSGALN+AA+KK DLE WF
Sbjct: 289 IEQFCITEP--EKSWDMMEEMINNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWF 346
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILET 189
PG +RELVSCSNC DYQSR L +R G K + +T ATTRVIC ILE
Sbjct: 347 PGYNQYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILEN 406
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
+QTE G+ +P LR ++ + IPFVK AP
Sbjct: 407 YQTEGGITVPVPLRPYLGKDF------IPFVKAAP 435
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 124/168 (73%), Gaps = 8/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P ++SW ++EMI NSE+FY +LGI YRVVNIVSGALN
Sbjct: 276 DTWGIFRVHQFEKIEQFCITEP--EKSWDMMEEMINNSEQFYQELGIPYRVVNIVSGALN 333
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLE WFPG +RELVSCSNC YQSR L +R G K+ ++ ++VHMLN+T
Sbjct: 334 NAASKKYDLEGWFPGYNQYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTL 393
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
ATTRVIC ILE +QTE G+ +P LR ++ + IPFVK AP
Sbjct: 394 AATTRVICCILENYQTEGGITVPVPLRPYLGKDF------IPFVKAAP 435
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSEQPI A H+D W+ E LP +Y+G STCFR+E +
Sbjct: 229 EEKYLIATSEQPISAFHQDEWIEEKDLPKKYVGYSTCFRKEAGS 272
>gi|67903760|ref|XP_682136.1| hypothetical protein AN8867.2 [Aspergillus nidulans FGSC A4]
gi|40740965|gb|EAA60155.1| hypothetical protein AN8867.2 [Aspergillus nidulans FGSC A4]
gi|259482913|tpe|CBF77842.1| TPA: seryl-tRNA synthetase (AFU_orthologue; AFUA_5G05490)
[Aspergillus nidulans FGSC A4]
Length = 474
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 160/231 (69%), Gaps = 17/231 (7%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPIRY G STC+R+E G+HG+D GIFRVH
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIRYAGYSTCYRKEAGAHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT P D SWK DEMI SEEFY LG+ Y+VV+IVSGALN+AAAKK DL
Sbjct: 290 QFEKIEQFVLTKPED--SWKAFDEMISTSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP ++ELVSCSNC DYQ+R L +RYG K +K Y AT CAT R +C
Sbjct: 348 EAWFPFQQEYKELVSCSNCTDYQARALGIRYGPKKTTDAKKSYVHALNATLCATERTLCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKK 235
+LE +QTE G +P+ LRK++P A E +P+ K P D TK + K
Sbjct: 408 VLENYQTEDGFIVPEPLRKYIPG-----APEFLPYTKELPKDSTSTKARSK 453
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 124/180 (68%), Gaps = 8/180 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P D SWK DEMI SEEFY LG+ Y+VV+IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVLTKPED--SWKAFDEMISTSEEFYKSLGLPYQVVSIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQ+R L +RYG K + K +VH LNAT
Sbjct: 339 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQARALGIRYGPKKTTDAKKSYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C +LE +QTE G +P+ LRK++P A E +P+ K P D TK + K
Sbjct: 399 CATERTLCCVLENYQTEDGFIVPEPLRKYIPG-----APEFLPYTKELPKDSTSTKARSK 453
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 514 LREVIGK-------GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYL 566
LRE++ K E++ +D+ DKYLIATSEQP+ A+H WL + LPIRY
Sbjct: 206 LREMMAKTAQLEQFDEELYKVTESEDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIRYA 265
Query: 567 GVSTCFRQECDA 578
G STC+R+E A
Sbjct: 266 GYSTCYRKEAGA 277
>gi|164429332|ref|XP_955965.2| seryl-tRNA synthetase [Neurospora crassa OR74A]
gi|157073440|gb|EAA26729.2| seryl-tRNA synthetase [Neurospora crassa OR74A]
Length = 506
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/229 (58%), Positives = 158/229 (68%), Gaps = 18/229 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A H D WL LP++Y G STCFR+E G+HG+D GIFRVH+F KV
Sbjct: 273 DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKV 332
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M + MI NSE FY LGI YRVV IVSGALN+AAAKKLDLEAWFP
Sbjct: 333 EQFCITEP--EKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLEAWFP 390
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAILETH 190
G F+ELVSCSNC DYQSR L +R+G KQ K Y +T ATTR ICAILE
Sbjct: 391 HQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILENF 450
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEG 239
QT GV++P+ LRK++P G F+ AP +E K+ K K+G
Sbjct: 451 QTPEGVKVPEPLRKYLP-------GAPEFIPFAPEPVKEVKEGKSGKKG 492
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 126/183 (68%), Gaps = 9/183 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH+F KVEQF +T P ++SW+ + MI NSE FY LGI YRVV IVSGALN
Sbjct: 319 DVWGIFRVHEFTKVEQFCITEP--EKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALN 376
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP G F+ELVSCSNC YQSR L +R+G K+ + K +VH LN+T
Sbjct: 377 NAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTL 436
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
ATTR ICAILE QT GV++P+ LRK++P G F+ AP +E K+ K
Sbjct: 437 TATTRTICAILENFQTPEGVKVPEPLRKYLP-------GAPEFIPFAPEPVKEVKEGKSG 489
Query: 483 KEG 485
K+G
Sbjct: 490 KKG 492
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A H D WL LP++Y G STCFR+E A
Sbjct: 273 DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGA 315
>gi|28950357|emb|CAD70981.1| probable serine-tRNA ligase, cytosolic [Neurospora crassa]
Length = 465
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/229 (58%), Positives = 158/229 (68%), Gaps = 18/229 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A H D WL LP++Y G STCFR+E G+HG+D GIFRVH+F KV
Sbjct: 232 DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKV 291
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M + MI NSE FY LGI YRVV IVSGALN+AAAKKLDLEAWFP
Sbjct: 292 EQFCITEP--EKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLEAWFP 349
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAILETH 190
G F+ELVSCSNC DYQSR L +R+G KQ K Y +T ATTR ICAILE
Sbjct: 350 HQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILENF 409
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEG 239
QT GV++P+ LRK++P G F+ AP +E K+ K K+G
Sbjct: 410 QTPEGVKVPEPLRKYLP-------GAPEFIPFAPEPVKEVKEGKSGKKG 451
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 126/183 (68%), Gaps = 9/183 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH+F KVEQF +T P ++SW+ + MI NSE FY LGI YRVV IVSGALN
Sbjct: 278 DVWGIFRVHEFTKVEQFCITEP--EKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALN 335
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP G F+ELVSCSNC YQSR L +R+G K+ + K +VH LN+T
Sbjct: 336 NAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTL 395
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
ATTR ICAILE QT GV++P+ LRK++P G F+ AP +E K+ K
Sbjct: 396 TATTRTICAILENFQTPEGVKVPEPLRKYLP-------GAPEFIPFAPEPVKEVKEGKSG 448
Query: 483 KEG 485
K+G
Sbjct: 449 KKG 451
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A H D WL LP++Y G STCFR+E A
Sbjct: 232 DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGA 274
>gi|258571451|ref|XP_002544529.1| seryl-tRNA synthetase [Uncinocarpus reesii 1704]
gi|237904799|gb|EEP79200.1| seryl-tRNA synthetase [Uncinocarpus reesii 1704]
Length = 472
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/232 (54%), Positives = 160/232 (68%), Gaps = 15/232 (6%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E GSHG+D GIFRVH
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCFRKEAGSHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT P D SWK D+MI SEEFY LG+ Y++++IVSGALN+AA+KK DL
Sbjct: 290 QFEKIEQFVLTKPED--SWKAFDDMIATSEEFYQSLGLPYQIISIVSGALNNAASKKWDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQSR L +RYG K +K Y AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQSRELDIRYGPKKTTDTKKAYVHALNATLCATERALCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQK 237
+LE +Q E G+ +P+ LRK++P + +P+ K P D K + K K
Sbjct: 408 VLENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKDTTSQKAKSKVK 455
Score = 205 bits (522), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 128/190 (67%), Gaps = 6/190 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P D SWK D+MI SEEFY LG+ Y++++IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVLTKPED--SWKAFDDMIATSEEFYQSLGLPYQIISIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQSR L +RYG K + K +VH LNAT
Sbjct: 339 NAASKKWDLEAWFPFQGEYKELVSCSNCTDYQSRELDIRYGPKKTTDTKKAYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C +LE +Q E G+ +P+ LRK++P + +P+ K P D K + K
Sbjct: 399 CATERALCCVLENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKDTTSQKAKSKV 454
Query: 483 KEGMKKKVLI 492
K K+ ++
Sbjct: 455 KPKADKQEVV 464
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCFRKEA 275
>gi|340959783|gb|EGS20964.1| hypothetical protein CTHT_0028030 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 439
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/228 (58%), Positives = 158/228 (69%), Gaps = 23/228 (10%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
+KYLIATSEQPI A H D WL LP++Y G STCFR+E G+HG+D GIFRVH+F KV
Sbjct: 222 EKYLIATSEQPISAYHADEWLQPKQLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKV 281
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M + MI SEEFY LGI YRVV IVSGALN+AA+KKLDLEAWFP
Sbjct: 282 EQFCITDP--EKSWEMFESMISTSEEFYQSLGIPYRVVAIVSGALNNAASKKLDLEAWFP 339
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAILETH 190
G F+ELVSCSNC DYQSR L +R+G KQ K Y +T ATTR ICAILE
Sbjct: 340 HQGEFKELVSCSNCTDYQSRDLEIRFGIKKQTDVKKTYVHCLNSTLTATTRTICAILENF 399
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKE 238
QTE GV+IP+ LRK++P IPF TAP +KK+KE
Sbjct: 400 QTEDGVKIPEPLRKYLPGA----PDFIPFANTAP--------EKKEKE 435
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 126/182 (69%), Gaps = 14/182 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH+F KVEQF +T P ++SW+ + MI SEEFY LGI YRVV IVSGALN
Sbjct: 268 DVWGIFRVHEFTKVEQFCITDP--EKSWEMFESMISTSEEFYQSLGIPYRVVAIVSGALN 325
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFP G F+ELVSCSNC YQSR L +R+G K+ + K +VH LN+T
Sbjct: 326 NAASKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGIKKQTDVKKTYVHCLNSTL 385
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
ATTR ICAILE QTE GV+IP+ LRK++P IPF TAP +KK+
Sbjct: 386 TATTRTICAILENFQTEDGVKIPEPLRKYLPGA----PDFIPFANTAP--------EKKE 433
Query: 483 KE 484
KE
Sbjct: 434 KE 435
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+KYLIATSEQPI A H D WL LP++Y G STCFR+E A
Sbjct: 222 EKYLIATSEQPISAYHADEWLQPKQLPLKYAGYSTCFRKEAGA 264
>gi|449017881|dbj|BAM81283.1| serine--tRNA ligase, cytoplasmic [Cyanidioschyzon merolae strain
10D]
Length = 476
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 153/213 (71%), Gaps = 15/213 (7%)
Query: 19 DDKY-LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFE 77
DDKY LIATSEQPICA H D WL ++LP+ Y G STCFR+E G+HGRD GIFRVHQFE
Sbjct: 257 DDKYYLIATSEQPICAYHTDEWLDPSTLPLLYAGFSTCFRKEAGAHGRDQLGIFRVHQFE 316
Query: 78 KVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAW 137
K+EQF +TSP D SW+ML+ ++ N+EEFY LGI YR+V+IVSGALN+AA+KK DLE W
Sbjct: 317 KIEQFAVTSPLDGASWEMLERLLGNAEEFYQSLGIPYRIVSIVSGALNNAASKKYDLEGW 376
Query: 138 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILE 188
+P S A+RELVSCSNC DYQSRRLL RYG K + +T CATTRVIC I+E
Sbjct: 377 YPASKAWRELVSCSNCTDYQSRRLLTRYGMKKGGDREKRFVHMLNSTLCATTRVICCIVE 436
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
+Q E GV +P L+ ++ L +PFV
Sbjct: 437 NYQRENGVEVPAVLQPYLGGETL-----LPFVN 464
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 121/167 (72%), Gaps = 9/167 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF +TSP D SW+ L+ ++ N+EEFY LGI YR+V+IVSGALN
Sbjct: 305 DQLGIFRVHQFEKIEQFAVTSPLDGASWEMLERLLGNAEEFYQSLGIPYRIVSIVSGALN 364
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLE W+P S A+RELVSCSNC YQSRRLL RYG K + + FVHMLN+T
Sbjct: 365 NAASKKYDLEGWYPASKAWRELVSCSNCTDYQSRRLLTRYGMKKGGDREKRFVHMLNSTL 424
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE--IPFVK 467
CATTRVIC I+E +Q E GV +P L+ ++ GE +PFV
Sbjct: 425 CATTRVICCIVENYQRENGVEVPAVLQPYL-------GGETLLPFVN 464
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 535 DDKY-LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DDKY LIATSEQPICA H D WL ++LP+ Y G STCFR+E A
Sbjct: 257 DDKYYLIATSEQPICAYHTDEWLDPSTLPLLYAGFSTCFRKEAGA 301
>gi|336472324|gb|EGO60484.1| seryl-tRNA synthetase [Neurospora tetrasperma FGSC 2508]
gi|350294458|gb|EGZ75543.1| seryl-tRNA synthetase [Neurospora tetrasperma FGSC 2509]
Length = 494
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/229 (58%), Positives = 158/229 (68%), Gaps = 18/229 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A H D WL LP++Y G STCFR+E G+HG+D GIFRVH+F KV
Sbjct: 261 DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKV 320
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M + MI NSE FY LGI YRVV IVSGALN+AAAKKLDLEAWFP
Sbjct: 321 EQFCITEP--EKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLEAWFP 378
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAILETH 190
G F+ELVSCSNC DYQSR L +R+G KQ K Y +T ATTR ICAILE
Sbjct: 379 HQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILENF 438
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEG 239
QT GV++P+ LRK++P G F+ AP +E K+ K K+G
Sbjct: 439 QTPEGVKVPEPLRKYLP-------GAPEFIPFAPEPVKEVKEGKSGKKG 480
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 126/183 (68%), Gaps = 9/183 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH+F KVEQF +T P ++SW+ + MI NSE FY LGI YRVV IVSGALN
Sbjct: 307 DVWGIFRVHEFTKVEQFCITEP--EKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALN 364
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP G F+ELVSCSNC YQSR L +R+G K+ + K +VH LN+T
Sbjct: 365 NAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTL 424
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
ATTR ICAILE QT GV++P+ LRK++P G F+ AP +E K+ K
Sbjct: 425 TATTRTICAILENFQTPEGVKVPEPLRKYLP-------GAPEFIPFAPEPVKEVKEGKSG 477
Query: 483 KEG 485
K+G
Sbjct: 478 KKG 480
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A H D WL LP++Y G STCFR+E A
Sbjct: 261 DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGA 303
>gi|408389999|gb|EKJ69416.1| hypothetical protein FPSE_10406 [Fusarium pseudograminearum CS3096]
Length = 469
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 129/237 (54%), Positives = 164/237 (69%), Gaps = 22/237 (9%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+YLIATSEQP+ A+H + W+ A LPI+Y G STCFR+E GSHGRD G+FRVHQFEKV
Sbjct: 234 DRYLIATSEQPLSALHAEEWIQPAELPIKYCGYSTCFRKEAGSHGRDAWGVFRVHQFEKV 293
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQFVL P D+SW D+M+ NSEEFY LG+ Y+VV IV+GALN+AAAKK DLEAWFP
Sbjct: 294 EQFVLCGP--DDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAAKKYDLEAWFP 351
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------------IYATACATTRVICAI 186
++ELVSCSNC DYQ+R L +R+G K K + AT CAT R +C I
Sbjct: 352 FQKEYKELVSCSNCTDYQTRELEIRHGAKKGKQIVGGGKKEYVHALNATLCATERTLCCI 411
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
LE +QTE G+ +P+ LRK++P E +PF+K AP +E +K +K+ G K+K
Sbjct: 412 LENYQTEEGLVVPEVLRKYIPG----EPDFLPFIKEAP---KEAEKAEKKDAGKKEK 461
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 132/193 (68%), Gaps = 13/193 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEKVEQFVL P D+SW D+M+ NSEEFY LG+ Y+VV IV+GALN
Sbjct: 280 DAWGVFRVHQFEKVEQFVLCGP--DDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKM----NEKIEFVHML 418
+AAAKK DLEAWFP ++ELVSCSNC YQ+R L +R+G K K E+VH L
Sbjct: 338 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQTRELEIRHGAKKGKQIVGGGKKEYVHAL 397
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
NAT CAT R +C ILE +QTE G+ +P+ LRK++P E +PF+K AP +E +K
Sbjct: 398 NATLCATERTLCCILENYQTEEGLVVPEVLRKYIPG----EPDFLPFIKEAP---KEAEK 450
Query: 479 QKKQKEGMKKKVL 491
+K+ G K+K L
Sbjct: 451 AEKKDAGKKEKTL 463
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+YLIATSEQP+ A+H + W+ A LPI+Y G STCFR+E +
Sbjct: 234 DRYLIATSEQPLSALHAEEWIQPAELPIKYCGYSTCFRKEAGS 276
>gi|328871735|gb|EGG20105.1| seryl-tRNA synthetase [Dictyostelium fasciculatum]
Length = 452
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 154/217 (70%), Gaps = 16/217 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E ++KYLIATSEQPI A HR WL E LP RY G STCFR+E GSHGRDT GIFRVHQF
Sbjct: 232 EENEKYLIATSEQPISAFHRGEWLEEKDLPKRYAGYSTCFRKEAGSHGRDTWGIFRVHQF 291
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFV+T P D SW+M ++MI+ +EE+Y +LG+ Y+VV+IVS ALN+AAAKK DLE
Sbjct: 292 EKIEQFVITKPED--SWEMHEQMIKTAEEYYQELGLPYQVVSIVSSALNNAAAKKYDLEG 349
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFPG A+RELVSCSNC DYQ+R L +R G KQ + +T ATTRVIC IL
Sbjct: 350 WFPGYNAYRELVSCSNCTDYQARDLEIRCGMKKQGQQQKRYVHMLNSTLAATTRVICCIL 409
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QTE G+ +P L+ F+ V IPFVK P
Sbjct: 410 ENYQTEGGINVPTVLQPFMGGVTF-----IPFVKPKP 441
Score = 199 bits (505), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 122/168 (72%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQFV+T P D SW+ ++MI+ +EE+Y +LG+ Y+VV+IVS ALN
Sbjct: 281 DTWGIFRVHQFEKIEQFVITKPED--SWEMHEQMIKTAEEYYQELGLPYQVVSIVSSALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE WFPG A+RELVSCSNC YQ+R L +R G K+ ++ +VHMLN+T
Sbjct: 339 NAAAKKYDLEGWFPGYNAYRELVSCSNCTDYQARDLEIRCGMKKQGQQQKRYVHMLNSTL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
ATTRVIC ILE +QTE G+ +P L+ F+ V IPFVK P
Sbjct: 399 AATTRVICCILENYQTEGGINVPTVLQPFMGGVTF-----IPFVKPKP 441
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E ++KYLIATSEQPI A HR WL E LP RY G STCFR+E +
Sbjct: 232 EENEKYLIATSEQPISAFHRGEWLEEKDLPKRYAGYSTCFRKEAGS 277
>gi|46116720|ref|XP_384378.1| hypothetical protein FG04202.1 [Gibberella zeae PH-1]
Length = 471
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 129/237 (54%), Positives = 164/237 (69%), Gaps = 22/237 (9%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+YLIATSEQP+ A+H + W+ A LPI+Y G STCFR+E GSHGRD G+FRVHQFEKV
Sbjct: 236 DRYLIATSEQPLSALHAEEWIQPAELPIKYCGYSTCFRKEAGSHGRDAWGVFRVHQFEKV 295
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQFVL P D+SW D+M+ NSEEFY LG+ Y+VV IV+GALN+AAAKK DLEAWFP
Sbjct: 296 EQFVLCGP--DDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAAKKYDLEAWFP 353
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------------IYATACATTRVICAI 186
++ELVSCSNC DYQ+R L +R+G K K + AT CAT R +C I
Sbjct: 354 FQKEYKELVSCSNCTDYQTRELEIRHGAKKGKQIVGGGKKEYVHALNATLCATERTLCCI 413
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
LE +QTE G+ +P+ LRK++P E +PF+K AP +E +K +K+ G K+K
Sbjct: 414 LENYQTEEGLVVPEVLRKYIPG----EPDFLPFIKEAP---KEAEKAEKKDAGKKEK 463
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 132/193 (68%), Gaps = 13/193 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEKVEQFVL P D+SW D+M+ NSEEFY LG+ Y+VV IV+GALN
Sbjct: 282 DAWGVFRVHQFEKVEQFVLCGP--DDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALN 339
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKM----NEKIEFVHML 418
+AAAKK DLEAWFP ++ELVSCSNC YQ+R L +R+G K K E+VH L
Sbjct: 340 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQTRELEIRHGAKKGKQIVGGGKKEYVHAL 399
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
NAT CAT R +C ILE +QTE G+ +P+ LRK++P E +PF+K AP +E +K
Sbjct: 400 NATLCATERTLCCILENYQTEEGLVVPEVLRKYIPG----EPDFLPFIKEAP---KEAEK 452
Query: 479 QKKQKEGMKKKVL 491
+K+ G K+K L
Sbjct: 453 AEKKDAGKKEKTL 465
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+YLIATSEQP+ A+H + W+ A LPI+Y G STCFR+E +
Sbjct: 236 DRYLIATSEQPLSALHAEEWIQPAELPIKYCGYSTCFRKEAGS 278
>gi|145253905|ref|XP_001398465.1| seryl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
gi|134084041|emb|CAL00579.1| unnamed protein product [Aspergillus niger]
gi|350634115|gb|EHA22479.1| hypothetical protein ASPNIDRAFT_57312 [Aspergillus niger ATCC 1015]
Length = 474
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 161/232 (69%), Gaps = 17/232 (7%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E G+HG+D GIFRVH
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT P D SW+ DEM+ SEEFY LG+ Y+VV IVSGALN+AA+KK DL
Sbjct: 290 QFEKIEQFVLTKPED--SWQAFDEMMATSEEFYRSLGLPYQVVAIVSGALNNAASKKYDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQSR L +RYG K +K Y AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQSRALEIRYGTKKATDVKKSYVHALNATLCATERTLCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQ 236
+LE +QT+ G+ +P+ LRK++P A E IP+ K P D K + KQ
Sbjct: 408 VLENYQTDDGIIVPEPLRKYIPG-----APEFIPYSKELPKDSTSNKNKAKQ 454
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 125/181 (69%), Gaps = 8/181 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P D SW+ DEM+ SEEFY LG+ Y+VV IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVLTKPED--SWQAFDEMMATSEEFYRSLGLPYQVVAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQSR L +RYG K + K +VH LNAT
Sbjct: 339 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRYGTKKATDVKKSYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C +LE +QT+ G+ +P+ LRK++P A E IP+ K P D K + K
Sbjct: 399 CATERTLCCVLENYQTDDGIIVPEPLRKYIPG-----APEFIPYSKELPKDSTSNKNKAK 453
Query: 482 Q 482
Q
Sbjct: 454 Q 454
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E A
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGA 277
>gi|398392814|ref|XP_003849866.1| serine--tRNA ligase [Zymoseptoria tritici IPO323]
gi|339469744|gb|EGP84842.1| hypothetical protein MYCGRDRAFT_61156 [Zymoseptoria tritici IPO323]
Length = 486
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 155/231 (67%), Gaps = 15/231 (6%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E D DKYLIATSEQPI A+H WL + LPI+Y G STCFR+E GSHG+D GIFRV
Sbjct: 234 ENDPASDKYLIATSEQPISALHEGEWLNKEDLPIKYAGYSTCFRKEAGSHGKDAWGIFRV 293
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEK+EQFV P D SW+ D MI SEEFY L I YRVV IVSGALN+AAAKK D
Sbjct: 294 HQFEKIEQFVFCKPED--SWEHFDGMINTSEEFYKSLKIPYRVVAIVSGALNNAAAKKYD 351
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP G ++ELVSCSNC DYQ+R L +R+GQ K QK Y +T CAT R +C
Sbjct: 352 LEAWFPFQGEYKELVSCSNCTDYQTRELEIRFGQKKLTDTQKTYVHALNSTLCATERALC 411
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
+LE +Q E G+ +P+ LRK++P + +P+VK P D K + K
Sbjct: 412 CVLENYQREDGIEVPEVLRKYIPG----QPEFLPYVKELPKDSTSLKAKGK 458
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 120/179 (67%), Gaps = 6/179 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV P D SW+ D MI SEEFY L I YRVV IVSGALN
Sbjct: 286 DAWGIFRVHQFEKIEQFVFCKPED--SWEHFDGMINTSEEFYKSLKIPYRVVAIVSGALN 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQ+R L +R+GQ K + + +VH LN+T
Sbjct: 344 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQTRELEIRFGQKKLTDTQKTYVHALNSTL 403
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
CAT R +C +LE +Q E G+ +P+ LRK++P + +P+VK P D K + K
Sbjct: 404 CATERALCCVLENYQREDGIEVPEVLRKYIPG----QPEFLPYVKELPKDSTSLKAKGK 458
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D DKYLIATSEQPI A+H WL + LPI+Y G STCFR+E
Sbjct: 234 ENDPASDKYLIATSEQPISALHEGEWLNKEDLPIKYAGYSTCFRKEA 280
>gi|154312138|ref|XP_001555397.1| hypothetical protein BC1G_06102 [Botryotinia fuckeliana B05.10]
Length = 271
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 133/240 (55%), Positives = 158/240 (65%), Gaps = 17/240 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +DKYLIATSEQPI A H D WL +PIRY G S+C+R+E GSHGRD GIFRVHQ
Sbjct: 21 DAQNDKYLIATSEQPISAFHADEWLTAKDMPIRYAGFSSCYRREAGSHGRDAWGIFRVHQ 80
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSGALN+AAAKK DLE
Sbjct: 81 FEKIEQFVLTDP--EKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDLE 138
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +RYG Q + +T CAT R +C +
Sbjct: 139 AWFPFQGEYKELVSCSNCTDYQSRALEIRYGPKTQTGIRKNYVHALNSTLCATERALCCL 198
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQKEGMKKKLT 245
LE QTE G +P LRK++P A E IPF K P D K + K ++ K K+
Sbjct: 199 LENFQTEEGFNVPAPLRKYLPG-----APEFIPFSKELPKDTTSQKAKGKAEKAPKPKVA 253
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 125/189 (66%), Gaps = 8/189 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSGALN
Sbjct: 71 DAWGIFRVHQFEKIEQFVLTDP--EKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALN 128
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +RYG + + +VH LN+T
Sbjct: 129 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRYGPKTQTGIRKNYVHALNSTL 188
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C +LE QTE G +P LRK++P A E IPF K P D K + K
Sbjct: 189 CATERALCCLLENFQTEEGFNVPAPLRKYLPG-----APEFIPFSKELPKDTTSQKAKGK 243
Query: 482 QKEGMKKKV 490
++ K KV
Sbjct: 244 AEKAPKPKV 252
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D +DKYLIATSEQPI A H D WL +PIRY G S+C+R+E
Sbjct: 21 DAQNDKYLIATSEQPISAFHADEWLTAKDMPIRYAGFSSCYRREA 65
>gi|302837498|ref|XP_002950308.1| hypothetical protein VOLCADRAFT_81049 [Volvox carteri f.
nagariensis]
gi|300264313|gb|EFJ48509.1| hypothetical protein VOLCADRAFT_81049 [Volvox carteri f.
nagariensis]
Length = 472
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 153/216 (70%), Gaps = 16/216 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIATSEQ +CA+HR W ++ LPI+Y+G STCFR+EVGSHGRDT GIFR+HQF
Sbjct: 232 EGDDKYLIATSEQTLCAMHRKGWFEKSELPIKYVGYSTCFRKEVGSHGRDTLGIFRIHQF 291
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV+ SP SW+ ++EM+ N+E+FY LG+ YRVVNIVSG LN+AA+KK DLEA
Sbjct: 292 EKVEQFVIASPEGIASWEAMEEMLANAEDFYQSLGLPYRVVNIVSGELNNAASKKYDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----------QKIYATACATTRVICA 185
WFP S FRELVSCSNCLDYQSRRL +R K + +T AT R +C
Sbjct: 352 WFPASSTFRELVSCSNCLDYQSRRLDIRLRTPKGAAGEASKSFVHMLNSTLSATERTLCC 411
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
+LE +QT GVR+P L+ ++ + L IPF K
Sbjct: 412 VLENYQTAEGVRVPKFLQPYMMGIEL-----IPFRK 442
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 117/167 (70%), Gaps = 7/167 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFR+HQFEKVEQFV+ SP SW+ ++EM+ N+E+FY LG+ YRVVNIVSG LN
Sbjct: 281 DTLGIFRIHQFEKVEQFVIASPEGIASWEAMEEMLANAEDFYQSLGLPYRVVNIVSGELN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI--EFVHMLNA 420
+AA+KK DLEAWFP S FRELVSCSNCL YQSRRL +R K + FVHMLN+
Sbjct: 341 NAASKKYDLEAWFPASSTFRELVSCSNCLDYQSRRLDIRLRTPKGAAGEASKSFVHMLNS 400
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
T AT R +C +LE +QT GVR+P L+ ++ + + IPF K
Sbjct: 401 TLSATERTLCCVLENYQTAEGVRVPKFLQPYMMGIEL-----IPFRK 442
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 12/96 (12%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTYF- 585
E DDKYLIATSEQ +CA+HR W ++ LPI+Y+G STCFR+E + G+ R +
Sbjct: 232 EGDDKYLIATSEQTLCAMHRKGWFEKSELPIKYVGYSTCFRKEVGSHGRDTLGIFRIHQF 291
Query: 586 ----HVTCAQREGLLS-EATSEEVDQADPFYAHCRL 616
A EG+ S EA E + A+ FY L
Sbjct: 292 EKVEQFVIASPEGIASWEAMEEMLANAEDFYQSLGL 327
>gi|452982680|gb|EME82439.1| hypothetical protein MYCFIDRAFT_165530 [Pseudocercospora fijiensis
CIRAD86]
Length = 491
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/224 (56%), Positives = 154/224 (68%), Gaps = 17/224 (7%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E D DKYLIATSEQPI A+H D WL + LPIRY G+STCFR+E GSHG+D GIFRV
Sbjct: 234 ENDPTSDKYLIATSEQPISAMHADEWLNNSELPIRYGGLSTCFRKEAGSHGKDAWGIFRV 293
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEKVEQFV P D SWK DEMI SEEFY L I Y+VV IVSGALN+AA+KK D
Sbjct: 294 HQFEKVEQFVFCKPED--SWKHFDEMIGFSEEFYKTLKIPYQVVAIVSGALNNAASKKYD 351
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-----------IYATACATTRV 182
LEAWFP G ++ELVSCSNC DYQ+R L +RYGQ KQ + +T CA R
Sbjct: 352 LEAWFPFQGEYKELVSCSNCTDYQTRELEIRYGQKKQTDPSYKKDYVHALNSTLCAVQRA 411
Query: 183 ICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
+C ++E +Q E G+ +P+ LR+++P ++ +P+VK P D
Sbjct: 412 LCCVMENYQREDGMEVPEVLRRYMP----DQEEFLPYVKELPKD 451
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 136/210 (64%), Gaps = 10/210 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQFV P D SWK DEMI SEEFY L I Y+VV IVSGALN
Sbjct: 286 DAWGIFRVHQFEKVEQFVFCKPED--SWKHFDEMIGFSEEFYKTLKIPYQVVAIVSGALN 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE--KIEFVHMLNA 420
+AA+KK DLEAWFP G ++ELVSCSNC YQ+R L +RYGQ K+ + K ++VH LN+
Sbjct: 344 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQTRELEIRYGQKKQTDPSYKKDYVHALNS 403
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ- 479
T CA R +C ++E +Q E G+ +P+ LR+++P ++ +P+VK P D K +
Sbjct: 404 TLCAVQRALCCVMENYQREDGMEVPEVLRRYMP----DQEEFLPYVKELPKDSTSLKAKG 459
Query: 480 -KKQKEGMKKKVLIDEAMIQNEKDLIATEK 508
+QK+G K L ++ + +A EK
Sbjct: 460 TAEQKKGGGKPQLPNQGEVVERPKAVAEEK 489
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D DKYLIATSEQPI A+H D WL + LPIRY G+STCFR+E
Sbjct: 234 ENDPTSDKYLIATSEQPISAMHADEWLNNSELPIRYGGLSTCFRKEA 280
>gi|347836872|emb|CCD51444.1| similar to seryl-tRNA synthetase [Botryotinia fuckeliana]
Length = 480
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/239 (55%), Positives = 158/239 (66%), Gaps = 17/239 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +DKYLIATSEQPI A H D WL +PIRY G S+C+R+E GSHGRD GIFRVHQ
Sbjct: 230 DAQNDKYLIATSEQPISAFHADEWLTAKDMPIRYAGFSSCYRREAGSHGRDAWGIFRVHQ 289
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSGALN+AAAKK DLE
Sbjct: 290 FEKIEQFVLTDP--EKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDLE 347
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +RYG Q + +T CAT R +C +
Sbjct: 348 AWFPFQGEYKELVSCSNCTDYQSRALEIRYGPKTQTGIRKNYVHALNSTLCATERALCCL 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQKEGMKKKL 244
LE QTE G +P LRK++P A E IPF K P D K + K ++ K K+
Sbjct: 408 LENFQTEEGFNVPAPLRKYLPG-----APEFIPFSKELPKDTTSQKAKGKAEKAPKPKV 461
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 125/189 (66%), Gaps = 8/189 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSGALN
Sbjct: 280 DAWGIFRVHQFEKIEQFVLTDP--EKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +RYG + + +VH LN+T
Sbjct: 338 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRYGPKTQTGIRKNYVHALNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C +LE QTE G +P LRK++P A E IPF K P D K + K
Sbjct: 398 CATERALCCLLENFQTEEGFNVPAPLRKYLPG-----APEFIPFSKELPKDTTSQKAKGK 452
Query: 482 QKEGMKKKV 490
++ K KV
Sbjct: 453 AEKAPKPKV 461
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D +DKYLIATSEQPI A H D WL +PIRY G S+C+R+E
Sbjct: 230 DAQNDKYLIATSEQPISAFHADEWLTAKDMPIRYAGFSSCYRREA 274
>gi|453083611|gb|EMF11656.1| serine-tRNA ligase [Mycosphaerella populorum SO2202]
Length = 491
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/242 (53%), Positives = 160/242 (66%), Gaps = 19/242 (7%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E D DKYLIATSEQPI A+H WL LPI+Y G STCFR+E GSHG+D GIFRV
Sbjct: 234 ENDPATDKYLIATSEQPISALHEGEWLNPTDLPIKYAGYSTCFRKEAGSHGKDAWGIFRV 293
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEK+EQF+ +P D SWK D+MI SEEFY L + Y+VV IVSGALN+AAAKK D
Sbjct: 294 HQFEKIEQFIFCNPED--SWKHFDDMINTSEEFYKSLNLPYQVVAIVSGALNNAAAKKYD 351
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-----------IYATACATTRV 182
LEAWFP G ++ELVSCSNC DYQ+R L VR+GQ KQ + +T CAT R
Sbjct: 352 LEAWFPFQGEYKELVSCSNCTDYQTRELEVRFGQKKQTDASFQKSYVHALNSTLCATERA 411
Query: 183 ICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ--KKQKEGM 240
+C +LE +Q E G+ +P+ LRK++P + +P+VK P D K + +QK+G
Sbjct: 412 LCCVLENYQREDGIEVPEVLRKYIPG----QPEFLPYVKELPKDSTSLKAKGVAEQKKGG 467
Query: 241 KK 242
K
Sbjct: 468 GK 469
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 136/210 (64%), Gaps = 10/210 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF+ +P D SWK D+MI SEEFY L + Y+VV IVSGALN
Sbjct: 286 DAWGIFRVHQFEKIEQFIFCNPED--SWKHFDDMINTSEEFYKSLNLPYQVVAIVSGALN 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE--FVHMLNA 420
+AAAKK DLEAWFP G ++ELVSCSNC YQ+R L VR+GQ K+ + + +VH LN+
Sbjct: 344 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQTRELEVRFGQKKQTDASFQKSYVHALNS 403
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ- 479
T CAT R +C +LE +Q E G+ +P+ LRK++P + +P+VK P D K +
Sbjct: 404 TLCATERALCCVLENYQREDGIEVPEVLRKYIPG----QPEFLPYVKELPKDSTSLKAKG 459
Query: 480 -KKQKEGMKKKVLIDEAMIQNEKDLIATEK 508
+QK+G K + E + + +A E+
Sbjct: 460 VAEQKKGGGKPQVPGEGEVVSRPKAVAEEQ 489
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 33/49 (67%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E D DKYLIATSEQPI A+H WL LPI+Y G STCFR+E +
Sbjct: 234 ENDPATDKYLIATSEQPISALHEGEWLNPTDLPIKYAGYSTCFRKEAGS 282
>gi|225562259|gb|EEH10539.1| seryl-tRNA synthetase [Ajellomyces capsulatus G186AR]
Length = 489
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 159/225 (70%), Gaps = 24/225 (10%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E GSHG++ GIFRVH
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVH 295
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA++K DL
Sbjct: 296 QFEKIEQFVMTKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDL 353
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------------QKIY-----ATA 176
EAWFP G ++ELVSCSNC DYQ+R L +RY Q K +KIY AT
Sbjct: 354 EAWFPSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKIYVHALNATL 413
Query: 177 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
CAT R +C ILE +QTETG+ +P+ LRK++P + EIP+ K
Sbjct: 414 CATERTLCCILENYQTETGIIVPEVLRKYIPG----QPKEIPYTK 454
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 123/172 (71%), Gaps = 17/172 (9%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GIFRVHQFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 290 GIFRVHQFEKIEQFVMTKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAA 347
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKM----------NEKIEFV 415
++K DLEAWFP G ++ELVSCSNC YQ+R L +RY Q K + N+KI +V
Sbjct: 348 SRKNDLEAWFPSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKI-YV 406
Query: 416 HMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
H LNAT CAT R +C ILE +QTETG+ +P+ LRK++P + EIP+ K
Sbjct: 407 HALNATLCATERTLCCILENYQTETGIIVPEVLRKYIPG----QPKEIPYTK 454
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEA 281
>gi|297812973|ref|XP_002874370.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
gi|297320207|gb|EFH50629.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
Length = 434
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/206 (62%), Positives = 150/206 (72%), Gaps = 17/206 (8%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDK+LIAT+EQP+CA HR+ + + LP RY G STCFR+E GSHGRDT GIFRVHQF
Sbjct: 228 EGDDKFLIATAEQPLCAYHRNQTIHPSELPKRYAGYSTCFRKEAGSHGRDTLGIFRVHQF 287
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T+P+D SW ML+EM++NSEEFY L I YRVV++VSGALN AAAKK DLE
Sbjct: 288 EKVEQFCITAPND--SWAMLEEMLKNSEEFYQALKIPYRVVSVVSGALNDAAAKKYDLEG 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S +RELVSCSNC DYQSRRL +RYGQ K K + +T AT R IC IL
Sbjct: 346 WFPASETYRELVSCSNCTDYQSRRLDIRYGQNKSKDQTKQYVHMLNSTLTATERTICCIL 405
Query: 188 ETHQTETGVRIPDCL------RKFVP 207
E +Q E GV IPD L +KF+P
Sbjct: 406 ENYQREDGVDIPDVLQPYMGGKKFMP 431
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 117/157 (74%), Gaps = 8/157 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +T+P+D SW L+EM++NSEEFY L I YRVV++VSGALN
Sbjct: 277 DTLGIFRVHQFEKVEQFCITAPND--SWAMLEEMLKNSEEFYQALKIPYRVVSVVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLE WFP S +RELVSCSNC YQSRRL +RYGQ K ++ ++VHMLN+T
Sbjct: 335 DAAAKKYDLEGWFPASETYRELVSCSNCTDYQSRRLDIRYGQNKSKDQTKQYVHMLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCL------RKFVP 453
AT R IC ILE +Q E GV IPD L +KF+P
Sbjct: 395 TATERTICCILENYQREDGVDIPDVLQPYMGGKKFMP 431
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDK+LIAT+EQP+CA HR+ + + LP RY G STCFR+E
Sbjct: 228 EGDDKFLIATAEQPLCAYHRNQTIHPSELPKRYAGYSTCFRKEA 271
>gi|239613234|gb|EEQ90221.1| seryl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
gi|327357489|gb|EGE86346.1| seryl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 487
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 158/223 (70%), Gaps = 22/223 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E GSHG++ GIFRVH
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVH 295
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV+T P D SW ++M++NSEEFY LG+ YRVV+IVSGALN+AA++K DL
Sbjct: 296 QFEKIEQFVMTKPED--SWDAFEDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDL 353
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----------QKIY-----ATACA 178
EAWFP G ++ELVSCSNC DYQSR L +RY K +K+Y AT CA
Sbjct: 354 EAWFPSQGTYKELVSCSNCTDYQSRALEIRYRAKKDDEKDTRSDENKKVYVHALNATLCA 413
Query: 179 TTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
T R +C ILE +QTETG+ +P LRK++P + EIP+ K
Sbjct: 414 TERTLCCILENYQTETGIIVPKVLRKYIPG----QPTEIPYTK 452
Score = 199 bits (506), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 122/170 (71%), Gaps = 15/170 (8%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GIFRVHQFEK+EQFV+T P D SW ++M++NSEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 290 GIFRVHQFEKIEQFVMTKPED--SWDAFEDMMKNSEEFYQSLGLPYRVVDIVSGALNNAA 347
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE--------FVHM 417
++K DLEAWFP G ++ELVSCSNC YQSR L +RY + KK +EK +VH
Sbjct: 348 SRKNDLEAWFPSQGTYKELVSCSNCTDYQSRALEIRY-RAKKDDEKDTRSDENKKVYVHA 406
Query: 418 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
LNAT CAT R +C ILE +QTETG+ +P LRK++P + EIP+ K
Sbjct: 407 LNATLCATERTLCCILENYQTETGIIVPKVLRKYIPG----QPTEIPYTK 452
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEA 281
>gi|261190815|ref|XP_002621816.1| seryl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
gi|239590860|gb|EEQ73441.1| seryl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
Length = 487
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 158/223 (70%), Gaps = 22/223 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E GSHG++ GIFRVH
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVH 295
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV+T P D SW ++M++NSEEFY LG+ YRVV+IVSGALN+AA++K DL
Sbjct: 296 QFEKIEQFVMTKPED--SWDAFEDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDL 353
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----------QKIY-----ATACA 178
EAWFP G ++ELVSCSNC DYQSR L +RY K +K+Y AT CA
Sbjct: 354 EAWFPSQGTYKELVSCSNCTDYQSRALEIRYRAKKDDEKDTRSDENKKVYVHALNATLCA 413
Query: 179 TTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
T R +C ILE +QTETG+ +P LRK++P + EIP+ K
Sbjct: 414 TERTLCCILENYQTETGIIVPKVLRKYIPG----QPTEIPYTK 452
Score = 199 bits (506), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 122/170 (71%), Gaps = 15/170 (8%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GIFRVHQFEK+EQFV+T P D SW ++M++NSEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 290 GIFRVHQFEKIEQFVMTKPED--SWDAFEDMMKNSEEFYQSLGLPYRVVDIVSGALNNAA 347
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE--------FVHM 417
++K DLEAWFP G ++ELVSCSNC YQSR L +RY + KK +EK +VH
Sbjct: 348 SRKNDLEAWFPSQGTYKELVSCSNCTDYQSRALEIRY-RAKKDDEKDTRSDENKKVYVHA 406
Query: 418 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
LNAT CAT R +C ILE +QTETG+ +P LRK++P + EIP+ K
Sbjct: 407 LNATLCATERTLCCILENYQTETGIIVPKVLRKYIPG----QPTEIPYTK 452
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEA 281
>gi|449301514|gb|EMC97525.1| hypothetical protein BAUCODRAFT_23800 [Baudoinia compniacensis UAMH
10762]
Length = 491
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 152/233 (65%), Gaps = 17/233 (7%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E D DKYLIATSEQPI A+H WL LPI+Y G STCFR+E GSHG+D GIFRV
Sbjct: 234 ENDPASDKYLIATSEQPISALHEGEWLNATDLPIKYAGFSTCFRKEAGSHGKDAWGIFRV 293
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEK+EQFV P D SW DEMI SE FY L I YRVV IVSGALN+AA+KK D
Sbjct: 294 HQFEKIEQFVFCKPED--SWNHFDEMIATSEAFYKTLNIPYRVVAIVSGALNNAASKKYD 351
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-----------IYATACATTRV 182
LEAWFP G ++ELVSCSNC DYQ+R L +R+GQ KQ + +T CAT R
Sbjct: 352 LEAWFPFQGEYKELVSCSNCTDYQTRELEIRFGQKKQTDASFQKSYVHALNSTLCATERA 411
Query: 183 ICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
+C +LE +QTE G+ +P+ LRK++P + +PF K P D K + K
Sbjct: 412 LCCVLENYQTEDGIVVPEVLRKYIPG----QPEFLPFTKELPKDSTSLKAKGK 460
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 120/181 (66%), Gaps = 8/181 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV P D SW DEMI SE FY L I YRVV IVSGALN
Sbjct: 286 DAWGIFRVHQFEKIEQFVFCKPED--SWNHFDEMIATSEAFYKTLNIPYRVVAIVSGALN 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE--FVHMLNA 420
+AA+KK DLEAWFP G ++ELVSCSNC YQ+R L +R+GQ K+ + + +VH LN+
Sbjct: 344 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQTRELEIRFGQKKQTDASFQKSYVHALNS 403
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
T CAT R +C +LE +QTE G+ +P+ LRK++P + +PF K P D K +
Sbjct: 404 TLCATERALCCVLENYQTEDGIVVPEVLRKYIPG----QPEFLPFTKELPKDSTSLKAKG 459
Query: 481 K 481
K
Sbjct: 460 K 460
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 32/47 (68%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D DKYLIATSEQPI A+H WL LPI+Y G STCFR+E
Sbjct: 234 ENDPASDKYLIATSEQPISALHEGEWLNATDLPIKYAGFSTCFRKEA 280
>gi|320040889|gb|EFW22822.1| seryl-tRNA synthetase [Coccidioides posadasii str. Silveira]
Length = 473
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 157/221 (71%), Gaps = 15/221 (6%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E GSHG+D GIFRVH
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQF+LT P +ESWK D+MI SEEFY LG+ Y++V+IVSGALN+AA+KK DL
Sbjct: 290 QFEKIEQFILTKP--EESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQSR L +R+G K +K Y AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 408 ILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 444
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 122/170 (71%), Gaps = 6/170 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF+LT P +ESWKT D+MI SEEFY LG+ Y++V+IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFILTKP--EESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQSR L +R+G K + K +VH LNAT
Sbjct: 339 NAASKKWDLEAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CAT R +C ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 399 CATERALCCILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 444
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEA 275
>gi|392865353|gb|EAS31135.2| serine-tRNA ligase [Coccidioides immitis RS]
Length = 473
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 157/221 (71%), Gaps = 15/221 (6%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E GSHG+D GIFRVH
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQF+LT P +ESWK D+MI SEEFY LG+ Y++V+IVSGALN+AA+KK DL
Sbjct: 290 QFEKIEQFILTKP--EESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQSR L +R+G K +K Y AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 408 ILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 444
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 122/170 (71%), Gaps = 6/170 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF+LT P +ESWKT D+MI SEEFY LG+ Y++V+IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFILTKP--EESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQSR L +R+G K + K +VH LNAT
Sbjct: 339 NAASKKWDLEAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CAT R +C ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 399 CATERALCCILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 444
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEA 275
>gi|367024667|ref|XP_003661618.1| hypothetical protein MYCTH_2301210 [Myceliophthora thermophila ATCC
42464]
gi|347008886|gb|AEO56373.1| hypothetical protein MYCTH_2301210 [Myceliophthora thermophila ATCC
42464]
Length = 452
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 149/211 (70%), Gaps = 15/211 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A H D WL LP++Y G S CFR+E G+HG+D GIFRVH+F KV
Sbjct: 232 DKYLIATSEQPISAFHSDEWLQPKQLPLKYAGYSNCFRKEAGAHGKDVWGIFRVHEFTKV 291
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M + MI SEEFY LGI YRVV IVSGALN+AAAKKLDLEAWFP
Sbjct: 292 EQFCITDP--EKSWEMFESMISTSEEFYKSLGIPYRVVAIVSGALNNAAAKKLDLEAWFP 349
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAILETH 190
G F+ELVSCSNC DYQSR L +R+G KQ K Y +T ATTR ICAILE
Sbjct: 350 HQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILENF 409
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
QTE GVRIP+ LRK++P IPF K
Sbjct: 410 QTEDGVRIPEPLRKYLPGA----PDFIPFAK 436
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 118/165 (71%), Gaps = 6/165 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH+F KVEQF +T P ++SW+ + MI SEEFY LGI YRVV IVSGALN
Sbjct: 278 DVWGIFRVHEFTKVEQFCITDP--EKSWEMFESMISTSEEFYKSLGIPYRVVAIVSGALN 335
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP G F+ELVSCSNC YQSR L +R+G K+ + K +VH LN+T
Sbjct: 336 NAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTL 395
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
ATTR ICAILE QTE GVRIP+ LRK++P IPF K
Sbjct: 396 TATTRTICAILENFQTEDGVRIPEPLRKYLPGA----PDFIPFAK 436
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 30/43 (69%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A H D WL LP++Y G S CFR+E A
Sbjct: 232 DKYLIATSEQPISAFHSDEWLQPKQLPLKYAGYSNCFRKEAGA 274
>gi|406860491|gb|EKD13549.1| seryl-tRNA synthetase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 486
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/244 (56%), Positives = 161/244 (65%), Gaps = 23/244 (9%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +DKYLIATSEQPI A H D WL LPI+Y G S+C+R+E GSHGRD GIFRVHQ
Sbjct: 230 DAQNDKYLIATSEQPISAFHADEWLVPKELPIKYAGFSSCYRREAGSHGRDAWGIFRVHQ 289
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQFVLT P ++SW+M DEMI SEEFY LG+ YRVV IVSGALN+AAAKK DLE
Sbjct: 290 FEKIEQFVLTDP--EKSWEMFDEMIAFSEEFYKSLGVPYRVVAIVSGALNNAAAKKYDLE 347
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +RYG Q + +T CAT R +C +
Sbjct: 348 AWFPFQGEYKELVSCSNCTDYQSRALEIRYGTKLQTEIRKKYVHALNSTLCATERALCCL 407
Query: 187 LETHQTE-----TGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETK-KQKKQKEG 239
LE QTE G ++P+ LRK++P A E +PF K P D K K K KE
Sbjct: 408 LENFQTEEACAPAGFKVPEPLRKYLPG-----APEFLPFTKELPKDTTSQKAKAKGGKEA 462
Query: 240 MKKK 243
K K
Sbjct: 463 SKPK 466
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 128/195 (65%), Gaps = 14/195 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P ++SW+ DEMI SEEFY LG+ YRVV IVSGALN
Sbjct: 280 DAWGIFRVHQFEKIEQFVLTDP--EKSWEMFDEMIAFSEEFYKSLGVPYRVVAIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +RYG + + ++VH LN+T
Sbjct: 338 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRYGTKLQTEIRKKYVHALNSTL 397
Query: 423 CATTRVICAILETHQTE-----TGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEET 476
CAT R +C +LE QTE G ++P+ LRK++P A E +PF K P D
Sbjct: 398 CATERALCCLLENFQTEEACAPAGFKVPEPLRKYLPG-----APEFLPFTKELPKDTTSQ 452
Query: 477 K-KQKKQKEGMKKKV 490
K K K KE K K
Sbjct: 453 KAKAKGGKEASKPKT 467
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D +DKYLIATSEQPI A H D WL LPI+Y G S+C+R+E
Sbjct: 230 DAQNDKYLIATSEQPISAFHADEWLVPKELPIKYAGFSSCYRREA 274
>gi|358400420|gb|EHK49751.1| hypothetical protein TRIATDRAFT_297642 [Trichoderma atroviride IMI
206040]
Length = 455
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 159/229 (69%), Gaps = 20/229 (8%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +DKYLIATSEQPI A H D WL LPI+Y G STC+R+E GSHGRD GI+RVHQ
Sbjct: 230 DSKNDKYLIATSEQPISAFHADEWLQPKELPIKYAGYSTCYRREAGSHGRDAWGIYRVHQ 289
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQF+LT P ++SW+ D+MI SEEFY LG+ Y+VV IVSGALN AA+KKLDLE
Sbjct: 290 FEKIEQFLLTDP--EKSWEAFDDMIAVSEEFYKSLGLPYQVVAIVSGALNDAASKKLDLE 347
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +R G Q + +T CATTR +C +
Sbjct: 348 AWFPFQGEYKELVSCSNCTDYQSRALEIRCGTKTQTDIKKKYVHCLNSTLCATTRTLCCV 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQK 234
LE +QTE G+R+P+ LRK++P A E IPF K P +ET QK
Sbjct: 408 LENYQTEDGLRVPEVLRKYLPG-----APEFIPFSKELP---KETSSQK 448
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 128/179 (71%), Gaps = 11/179 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GI+RVHQFEK+EQF+LT P ++SW+ D+MI SEEFY LG+ Y+VV IVSGALN
Sbjct: 280 DAWGIYRVHQFEKIEQFLLTDP--EKSWEAFDDMIAVSEEFYKSLGLPYQVVAIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+KKLDLEAWFP G ++ELVSCSNC YQSR L +R G + + K ++VH LN+T
Sbjct: 338 DAASKKLDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRCGTKTQTDIKKKYVHCLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQK 480
CATTR +C +LE +QTE G+R+P+ LRK++P A E IPF K P +ET QK
Sbjct: 398 CATTRTLCCVLENYQTEDGLRVPEVLRKYLPG-----APEFIPFSKELP---KETSSQK 448
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 32/45 (71%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D +DKYLIATSEQPI A H D WL LPI+Y G STC+R+E
Sbjct: 230 DSKNDKYLIATSEQPISAFHADEWLQPKELPIKYAGYSTCYRREA 274
>gi|393231791|gb|EJD39380.1| serine-tRNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 453
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 132/223 (59%), Positives = 158/223 (70%), Gaps = 15/223 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A+H D W PE LPI+Y G STCFR+E G+HGRDT GIFRVHQF
Sbjct: 234 DDKYLIATSEQPISALHSDEWFESPEKQLPIKYAGYSTCFRKEAGAHGRDTWGIFRVHQF 293
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF++T P ++SW LD+MI NSE FY LGI YRVV IVSGALN AAA K DLEA
Sbjct: 294 EKVEQFIITEP--EKSWATLDDMIANSEAFYQSLGIPYRVVAIVSGALNLAAATKYDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP GA++ELVSCSNC DYQSRRL VR G KQ + T CAT R +C ++
Sbjct: 352 WFPFQGAYKELVSCSNCTDYQSRRLEVRCGLRKQGDTRKNYVHMLNGTLCATERALCCLV 411
Query: 188 ETHQTETGVRIPDCLRKFVPAV-YLNEAGEIPFVKTAPIDEEE 229
E +QTETG+ IP+ LR ++ ++ A E+P K P D+++
Sbjct: 412 ENYQTETGLVIPEVLRPYMQGREFIEFARELPPAK-GPKDKKK 453
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 127/174 (72%), Gaps = 4/174 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF++T P ++SW TLD+MI NSE FY LGI YRVV IVSGALN
Sbjct: 283 DTWGIFRVHQFEKVEQFIITEP--EKSWATLDDMIANSEAFYQSLGIPYRVVAIVSGALN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLEAWFP GA++ELVSCSNC YQSRRL VR G K+ + + +VHMLN T
Sbjct: 341 LAAATKYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLRKQGDTRKNYVHMLNGTL 400
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIPFVKTAPIDEEE 475
CAT R +C ++E +QTETG+ IP+ LR ++ ++ A E+P K P D+++
Sbjct: 401 CATERALCCLVENYQTETGLVIPEVLRPYMQGREFIEFARELPPAK-GPKDKKK 453
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
DDKYLIATSEQPI A+H D W PE LPI+Y G STCFR+E A
Sbjct: 234 DDKYLIATSEQPISALHSDEWFESPEKQLPIKYAGYSTCFRKEAGA 279
>gi|340516135|gb|EGR46385.1| hypothetical protein TRIREDRAFT_123180 [Trichoderma reesei QM6a]
Length = 458
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 161/235 (68%), Gaps = 15/235 (6%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +DKYLIATSEQPI A H D WL LPI+Y G STC+R+E GSHGRD G++RVHQ
Sbjct: 230 DSKNDKYLIATSEQPISAFHADEWLQPKELPIKYAGYSTCYRREAGSHGRDAWGVYRVHQ 289
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQF+LT P ++SW+ D+MI SEEFY LG+ Y+VV IVSGALN AA+KKLDLE
Sbjct: 290 FEKIEQFLLTDP--EKSWEAFDDMIAVSEEFYKSLGLPYQVVAIVSGALNDAASKKLDLE 347
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +R G Q + +T CATTR +C +
Sbjct: 348 AWFPFQGEYKELVSCSNCTDYQSRALEIRCGTKTQTDIKKKYVHCLNSTLCATTRTLCCV 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMK 241
LE +QTE G+R+P+ LRK++P IPF K P + +K ++K+ +K
Sbjct: 408 LENYQTEDGLRVPEVLRKYLPG----NPEFIPFAKELPKEAPASKALPQRKKEVK 458
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 130/185 (70%), Gaps = 6/185 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G++RVHQFEK+EQF+LT P ++SW+ D+MI SEEFY LG+ Y+VV IVSGALN
Sbjct: 280 DAWGVYRVHQFEKIEQFLLTDP--EKSWEAFDDMIAVSEEFYKSLGLPYQVVAIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+KKLDLEAWFP G ++ELVSCSNC YQSR L +R G + + K ++VH LN+T
Sbjct: 338 DAASKKLDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRCGTKTQTDIKKKYVHCLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR +C +LE +QTE G+R+P+ LRK++P IPF K P + +K ++
Sbjct: 398 CATTRTLCCVLENYQTEDGLRVPEVLRKYLPG----NPEFIPFAKELPKEAPASKALPQR 453
Query: 483 KEGMK 487
K+ +K
Sbjct: 454 KKEVK 458
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 32/45 (71%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D +DKYLIATSEQPI A H D WL LPI+Y G STC+R+E
Sbjct: 230 DSKNDKYLIATSEQPISAFHADEWLQPKELPIKYAGYSTCYRREA 274
>gi|146079628|ref|XP_001463813.1| putative seryl-tRNA synthetase [Leishmania infantum JPCM5]
gi|134067901|emb|CAM66182.1| putative seryl-tRNA synthetase [Leishmania infantum JPCM5]
Length = 474
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 156/223 (69%), Gaps = 17/223 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSE PI A H + W E PI+Y GVS+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +D+SWKML+EMIQ S++F LG+ YRV+NI SGALN+AAAKK DLEAWF
Sbjct: 317 LEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSGALNNAAAKKYDLEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG---------QTKQ---KIYATACATTRVICAI 186
PGSGAFRELVSCSNC DYQ+R + R+G TK+ + T CA TR +C I
Sbjct: 377 PGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTANSTKEYCHMLNGTLCAVTRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
E +QTE G+ IP+ LR F+ + + F AP ++E
Sbjct: 437 CENYQTEEGILIPEVLRPFMMGTEM-----LKFPAEAPTADKE 474
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+ SP +D+SWK L+EMIQ S++F LG+ YRV+NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKK---MNEKIEFVHMLN 419
+AAAKK DLEAWFPGSGAFRELVSCSNC YQ+R + R+G K N E+ HMLN
Sbjct: 364 NAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTANSTKEYCHMLN 423
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFV 452
T CA TR +C I E +QTE G+ IP+ LR F+
Sbjct: 424 GTLCAVTRTMCCICENYQTEEGILIPEVLRPFM 456
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSE PI A H + W E PI+Y GVS+CFR+E A
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGA 300
>gi|398011586|ref|XP_003858988.1| seryl-tRNA synthetase, putative [Leishmania donovani]
gi|322497200|emb|CBZ32273.1| seryl-tRNA synthetase, putative [Leishmania donovani]
Length = 474
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 156/223 (69%), Gaps = 17/223 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSE PI A H + W E PI+Y GVS+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +D+SWKML+EMIQ S++F LG+ YRV+NI SGALN+AAAKK DLEAWF
Sbjct: 317 LEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSGALNNAAAKKYDLEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG---------QTKQ---KIYATACATTRVICAI 186
PGSGAFRELVSCSNC DYQ+R + R+G TK+ + T CA TR +C I
Sbjct: 377 PGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTANSTKEYCHMLNGTLCAVTRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
E +QTE G+ IP+ LR F+ + + F AP ++E
Sbjct: 437 CENYQTEEGIVIPEVLRPFMMGTEM-----LKFPAEAPTADKE 474
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+ SP +D+SWK L+EMIQ S++F LG+ YRV+NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKK---MNEKIEFVHMLN 419
+AAAKK DLEAWFPGSGAFRELVSCSNC YQ+R + R+G K N E+ HMLN
Sbjct: 364 NAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTANSTKEYCHMLN 423
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFV 452
T CA TR +C I E +QTE G+ IP+ LR F+
Sbjct: 424 GTLCAVTRTMCCICENYQTEEGIVIPEVLRPFM 456
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSE PI A H + W E PI+Y GVS+CFR+E A
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGA 300
>gi|121712548|ref|XP_001273885.1| seryl-tRNA synthetase [Aspergillus clavatus NRRL 1]
gi|119402038|gb|EAW12459.1| seryl-tRNA synthetase [Aspergillus clavatus NRRL 1]
Length = 474
Score = 256 bits (653), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/231 (53%), Positives = 162/231 (70%), Gaps = 15/231 (6%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ D+YLIATSEQP+ A+H WL + LPI+Y G STC+R+E G+HG+D GIFRVH
Sbjct: 230 EDKSTDRYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT P + SW++ +EM+ SEEFY LG+ Y+VV IVSGALN+AA+KK DL
Sbjct: 290 QFEKIEQFVLTKPEN--SWEVFEEMMATSEEFYQSLGLPYQVVAIVSGALNNAASKKYDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQ+R L +RYG K +K Y AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
ILE +QT+ G+++P+ LRK++P +PF K P D K++ KQ
Sbjct: 408 ILENYQTDDGLKVPEHLRKYIPGA----PDFLPFTKELPKDTTSQKQKGKQ 454
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 125/180 (69%), Gaps = 6/180 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P + SW+ +EM+ SEEFY LG+ Y+VV IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVLTKPEN--SWEVFEEMMATSEEFYQSLGLPYQVVAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQ+R L +RYG K + K +VH LNAT
Sbjct: 339 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +QT+ G+++P+ LRK++P +PF K P D K++ KQ
Sbjct: 399 CATERTLCCILENYQTDDGLKVPEHLRKYIPGA----PDFLPFTKELPKDTTSQKQKGKQ 454
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D+ D+YLIATSEQP+ A+H WL + LPI+Y G STC+R+E A
Sbjct: 230 EDKSTDRYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGA 277
>gi|154335764|ref|XP_001564118.1| putative seryl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061152|emb|CAM38174.1| putative seryl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 474
Score = 256 bits (653), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 156/222 (70%), Gaps = 17/222 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSE PI A H + W E + PI+Y GVS+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMNEPIKYAGVSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +D+SWKML+EM+Q S++F LG+ YRV+NI SGALN+AAAKK DLEAWF
Sbjct: 317 LEQFVVCSPREDQSWKMLEEMMQTSQDFNESLGLPYRVINICSGALNNAAAKKYDLEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG---------QTKQ---KIYATACATTRVICAI 186
PGSGAFRELVSCSNC DYQ+R + R+G TK+ + T CA TR +C I
Sbjct: 377 PGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTANNTKEYCHMLNGTLCAVTRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
E +QTE G+ IP+ LR F+ + + F AP E+
Sbjct: 437 CENYQTEEGIVIPEVLRPFMMGTEM-----LKFPAEAPAGEK 473
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+ SP +D+SWK L+EM+Q S++F LG+ YRV+NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMMQTSQDFNESLGLPYRVINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKK---MNEKIEFVHMLN 419
+AAAKK DLEAWFPGSGAFRELVSCSNC YQ+R + R+G K N E+ HMLN
Sbjct: 364 NAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTANNTKEYCHMLN 423
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFV 452
T CA TR +C I E +QTE G+ IP+ LR F+
Sbjct: 424 GTLCAVTRTMCCICENYQTEEGIVIPEVLRPFM 456
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSE PI A H + W E + PI+Y GVS+CFR+E A
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMNEPIKYAGVSSCFRKEAGA 300
>gi|393227215|gb|EJD34904.1| serine-tRNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 453
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 150/217 (69%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A+H D W PE LPI+Y G STCFR+E G+HGRDT GIFRVHQF
Sbjct: 234 DDKYLIATSEQPISALHSDEWFESPEKQLPIKYAGYSTCFRKEAGAHGRDTWGIFRVHQF 293
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF++T P ++SW LD+MI NSE FY LGI YRVV IVSGALN AAA K DLEA
Sbjct: 294 EKVEQFIITEP--EKSWATLDDMIANSEAFYQSLGIPYRVVAIVSGALNLAAATKYDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP GA++ELVSCSNC DYQSRRL VR G KQ + T CAT R +C ++
Sbjct: 352 WFPFQGAYKELVSCSNCTDYQSRRLEVRCGLRKQGDTRKNYVHMLNGTLCATERALCCLV 411
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QTETG+ IP+ LR Y+ I F K P
Sbjct: 412 ENYQTETGLVIPEVLRP-----YMQGRDFIEFTKEVP 443
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 126/174 (72%), Gaps = 4/174 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF++T P ++SW TLD+MI NSE FY LGI YRVV IVSGALN
Sbjct: 283 DTWGIFRVHQFEKVEQFIITEP--EKSWATLDDMIANSEAFYQSLGIPYRVVAIVSGALN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLEAWFP GA++ELVSCSNC YQSRRL VR G K+ + + +VHMLN T
Sbjct: 341 LAAATKYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLRKQGDTRKNYVHMLNGTL 400
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIPFVKTAPIDEEE 475
CAT R +C ++E +QTETG+ IP+ LR ++ ++ E+P K P D+++
Sbjct: 401 CATERALCCLVENYQTETGLVIPEVLRPYMQGRDFIEFTKEVPPAK-GPKDKKK 453
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
DDKYLIATSEQPI A+H D W PE LPI+Y G STCFR+E A
Sbjct: 234 DDKYLIATSEQPISALHSDEWFESPEKQLPIKYAGYSTCFRKEAGA 279
>gi|157865542|ref|XP_001681478.1| putative seryl-tRNA synthetase [Leishmania major strain Friedlin]
gi|68124775|emb|CAJ02371.1| putative seryl-tRNA synthetase [Leishmania major strain Friedlin]
Length = 474
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 156/223 (69%), Gaps = 17/223 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSE PI A H + W E PI+Y GVS+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +D+SWKML+EMIQ S++F LG+ YRV+NI SGALN+AAAKK DLEAWF
Sbjct: 317 LEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSGALNNAAAKKYDLEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG---------QTKQ---KIYATACATTRVICAI 186
PGSGAFRELVSCSNC DYQ+R + R+G TK+ + T CA TR +C I
Sbjct: 377 PGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTASNTKEYCHMLNGTLCAVTRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
E +QTE G+ IP+ LR F+ + + F AP ++E
Sbjct: 437 CENYQTEEGIVIPEVLRPFMMGTEM-----LKFPAEAPAADKE 474
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+ SP +D+SWK L+EMIQ S++F LG+ YRV+NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKK---MNEKIEFVHMLN 419
+AAAKK DLEAWFPGSGAFRELVSCSNC YQ+R + R+G K + E+ HMLN
Sbjct: 364 NAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTASNTKEYCHMLN 423
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFV 452
T CA TR +C I E +QTE G+ IP+ LR F+
Sbjct: 424 GTLCAVTRTMCCICENYQTEEGIVIPEVLRPFM 456
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSE PI A H + W E PI+Y GVS+CFR+E A
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGA 300
>gi|401416979|ref|XP_003872983.1| putative seryl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489210|emb|CBZ24465.1| putative seryl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 474
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 148/200 (74%), Gaps = 12/200 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSE PI A H + W E PI+Y GVS+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +D+SWKML+EMIQ S++F LG+ YRV+NI SGALN+AAAKK DLEAWF
Sbjct: 317 LEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSGALNNAAAKKYDLEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG---------QTKQ---KIYATACATTRVICAI 186
PGSGAFRELVSCSNC DYQ+R + R+G TK+ + T CA TR +C I
Sbjct: 377 PGSGAFRELVSCSNCTDYQARGVNCRFGPNTKGSTANNTKEYCHMLNGTLCAVTRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFV 206
E +QTE G+ IP+ LR F+
Sbjct: 437 CENYQTEEGIVIPEVLRPFM 456
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 123/176 (69%), Gaps = 8/176 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+ SP +D+SWK L+EMIQ S++F LG+ YRV+NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKK---MNEKIEFVHMLN 419
+AAAKK DLEAWFPGSGAFRELVSCSNC YQ+R + R+G K N E+ HMLN
Sbjct: 364 NAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARGVNCRFGPNTKGSTANNTKEYCHMLN 423
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
T CA TR +C I E +QTE G+ IP+ LR F+ V + F AP ++E
Sbjct: 424 GTLCAVTRTMCCICENYQTEEGIVIPEVLRPFMMGTEV-----LKFPAEAPAADKE 474
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSE PI A H + W E PI+Y GVS+CFR+E A
Sbjct: 257 DEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGA 300
>gi|156064361|ref|XP_001598102.1| hypothetical protein SS1G_00188 [Sclerotinia sclerotiorum 1980]
gi|154691050|gb|EDN90788.1| hypothetical protein SS1G_00188 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 598
Score = 255 bits (652), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 132/239 (55%), Positives = 157/239 (65%), Gaps = 17/239 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +DKYLIATSEQPI A H D WL +PIRY G S+C+R+E GSHGRD GIFRVHQ
Sbjct: 348 DAQNDKYLIATSEQPISAFHADEWLTAKDVPIRYAGFSSCYRREAGSHGRDAWGIFRVHQ 407
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSGALN+AAAKK DLE
Sbjct: 408 FEKIEQFVLTDP--EKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDLE 465
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +RYG Q + +T CAT R +C +
Sbjct: 466 AWFPFQGEYKELVSCSNCTDYQSRALEIRYGTKTQTEIRKKYVHALNSTLCATERALCCL 525
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQKEGMKKKL 244
LE QTE G +P+ LRK++P A E I F K P D K + K + K K+
Sbjct: 526 LENFQTEEGFNVPEPLRKYLPG-----APEFIAFSKELPKDTTSQKAKGKVDKAPKPKV 579
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 125/189 (66%), Gaps = 8/189 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSGALN
Sbjct: 398 DAWGIFRVHQFEKIEQFVLTDP--EKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALN 455
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +RYG + + ++VH LN+T
Sbjct: 456 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRYGTKTQTEIRKKYVHALNSTL 515
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C +LE QTE G +P+ LRK++P A E I F K P D K + K
Sbjct: 516 CATERALCCLLENFQTEEGFNVPEPLRKYLPG-----APEFIAFSKELPKDTTSQKAKGK 570
Query: 482 QKEGMKKKV 490
+ K KV
Sbjct: 571 VDKAPKPKV 579
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D +DKYLIATSEQPI A H D WL +PIRY G S+C+R+E
Sbjct: 348 DAQNDKYLIATSEQPISAFHADEWLTAKDVPIRYAGFSSCYRREA 392
>gi|336269802|ref|XP_003349661.1| hypothetical protein SMAC_07013 [Sordaria macrospora k-hell]
gi|380088800|emb|CCC13235.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 477
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 150/214 (70%), Gaps = 18/214 (8%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A H D WL LP++Y G STCFR+E G+HG+D GIFRVH+F KV
Sbjct: 244 DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKV 303
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M D MI NSE FY LGI YRVV IVSGALN+AAAKKLDLEAWFP
Sbjct: 304 EQFCVTEP--EKSWEMFDHMISNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLEAWFP 361
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAILETH 190
G F+ELVSCSNC DYQSR L +R+G KQ K Y +T ATTR ICAILE
Sbjct: 362 HQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILENF 421
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
QT GV++P+ LRK++P G F+ AP
Sbjct: 422 QTPEGVKVPEPLRKYLP-------GAPEFIPFAP 448
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 118/168 (70%), Gaps = 9/168 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH+F KVEQF +T P ++SW+ D MI NSE FY LGI YRVV IVSGALN
Sbjct: 290 DVWGIFRVHEFTKVEQFCVTEP--EKSWEMFDHMISNSEAFYQSLGIPYRVVAIVSGALN 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP G F+ELVSCSNC YQSR L +R+G K+ + K +VH LN+T
Sbjct: 348 NAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTL 407
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
ATTR ICAILE QT GV++P+ LRK++P G F+ AP
Sbjct: 408 TATTRTICAILENFQTPEGVKVPEPLRKYLP-------GAPEFIPFAP 448
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A H D WL LP++Y G STCFR+E A
Sbjct: 244 DKYLIATSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGA 286
>gi|6094413|sp|O81983.1|SYS_HELAN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|3451411|emb|CAB11470.1| seryl-tRNA synthetase [Helianthus annuus]
Length = 438
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 147/199 (73%), Gaps = 9/199 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIATAEQPLCAYHIDDWIHPNELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF LT P ++SW+M +EMI+NSEEFY L + Y+VV+IVSGALN AAAKK DLEA
Sbjct: 286 EKVEQFCLTKPSGNDSWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALNDAAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S +RELVSCSNC DYQSR+L +R GQ K + +T AT R +C IL
Sbjct: 346 WFPASKTYRELVSCSNCTDYQSRKLEIRCGQKKGNEQAKQYCHLLNSTLTATERTLCCIL 405
Query: 188 ETHQTETGVRIPDCLRKFV 206
E +QTE GV IP+ L+ F+
Sbjct: 406 ENYQTEKGVAIPEVLQPFM 424
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 113/150 (75%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF LT P ++SW+ +EMI+NSEEFY L + Y+VV+IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCLTKPSGNDSWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S +RELVSCSNC YQSR+L +R GQ K + ++ H+LN+T
Sbjct: 335 DAAAKKYDLEAWFPASKTYRELVSCSNCTDYQSRKLEIRCGQKKGNEQAKQYCHLLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452
AT R +C ILE +QTE GV IP+ L+ F+
Sbjct: 395 TATERTLCCILENYQTEKGVAIPEVLQPFM 424
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Query: 490 VLIDEAMIQNEKDLIATEKERNNAL-------REVIGKGEKVGDSAPE----KDELDDKY 538
V +++A+I D + EK + AL ++++GK ++ E E DDKY
Sbjct: 174 VRLNQALINFGLDFL--EKRKYTALQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKY 231
Query: 539 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
LIAT+EQP+CA H D W+ LP+RY G S+CFR+E +
Sbjct: 232 LIATAEQPLCAYHIDDWIHPNELPLRYAGYSSCFRKEAGS 271
>gi|357129465|ref|XP_003566382.1| PREDICTED: seryl-tRNA synthetase-like [Brachypodium distachyon]
Length = 456
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 159/228 (69%), Gaps = 16/228 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+CA H + A LPIRY G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPADLPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 287
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+D+ SW++ +EMI+NSE+FY ++G+ Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 288 IEQFCVTSPNDNNSWELHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWF 347
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S +RELVSCSNC DYQ+RRL + +GQ K + +T AT R +C ILE
Sbjct: 348 PASKTYRELVSCSNCTDYQARRLGIGFGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 407
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQK 237
+Q E GV +P LR F+ + +PF K P+D ++ K K
Sbjct: 408 YQKEDGVEVPKALRPFMGGIDF-----LPFKK--PLDSKQAADSKPTK 448
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 128/181 (70%), Gaps = 7/181 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+D+ SW+ +EMI+NSE+FY ++G+ Y++V+IVSGALN
Sbjct: 275 DTAGIFRVHQFEKIEQFCVTSPNDNNSWELHEEMIKNSEDFYKEIGLPYQLVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S +RELVSCSNC YQ+RRL + +GQ K + +FVHMLN+T
Sbjct: 335 DAAAKKYDLEAWFPASKTYRELVSCSNCTDYQARRLGIGFGQKKNDEQSKQFVHMLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
AT R +C ILE +Q E GV +P LR F+ + +PF K P+D ++ K
Sbjct: 395 TATERTLCCILENYQKEDGVEVPKALRPFMGGIDF-----LPFKK--PLDSKQAADSKPT 447
Query: 483 K 483
K
Sbjct: 448 K 448
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
++KYLIATSEQP+CA H + A LPIRY G STCFR+E
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPADLPIRYAGYSTCFRKEA 269
>gi|325091741|gb|EGC45051.1| seryl-tRNA synthetase [Ajellomyces capsulatus H88]
Length = 481
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 153/212 (72%), Gaps = 20/212 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E GSHG++ GIFRVH
Sbjct: 228 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVH 287
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA++K DL
Sbjct: 288 QFEKIEQFVMTKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDL 345
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------------QKIY-----ATA 176
EAWFP G ++ELVSCSNC DYQ+R L +RY Q K +KIY AT
Sbjct: 346 EAWFPSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKIYVHALNATL 405
Query: 177 CATTRVICAILETHQTETGVRIPDCLRKFVPA 208
CAT R +C ILE +QTETG+ +P+ LRK++P
Sbjct: 406 CATERTLCCILENYQTETGIIVPEVLRKYIPG 437
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 117/159 (73%), Gaps = 13/159 (8%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GIFRVHQFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 282 GIFRVHQFEKIEQFVMTKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAA 339
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKM----------NEKIEFV 415
++K DLEAWFP G ++ELVSCSNC YQ+R L +RY Q K + N+KI +V
Sbjct: 340 SRKNDLEAWFPSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKI-YV 398
Query: 416 HMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPA 454
H LNAT CAT R +C ILE +QTETG+ +P+ LRK++P
Sbjct: 399 HALNATLCATERTLCCILENYQTETGIIVPEVLRKYIPG 437
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 228 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEA 273
>gi|303319345|ref|XP_003069672.1| seryl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240109358|gb|EER27527.1| seryl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 473
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 156/221 (70%), Gaps = 15/221 (6%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E GSHG+D GIFRVH
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK +QF+LT P +ESWK D+MI SEEFY LG+ Y++V+IVSGALN+AA+KK DL
Sbjct: 290 QFEKAKQFILTKP--EESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQSR L +R+G K +K Y AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 408 ILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 444
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 121/170 (71%), Gaps = 6/170 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK +QF+LT P +ESWKT D+MI SEEFY LG+ Y++V+IVSGALN
Sbjct: 281 DAWGIFRVHQFEKAKQFILTKP--EESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQSR L +R+G K + K +VH LNAT
Sbjct: 339 NAASKKWDLEAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CAT R +C ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 399 CATERALCCILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 444
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEA 275
>gi|240277340|gb|EER40849.1| seryl-tRNA synthetase [Ajellomyces capsulatus H143]
Length = 463
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 153/212 (72%), Gaps = 20/212 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E GSHG++ GIFRVH
Sbjct: 210 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVH 269
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA++K DL
Sbjct: 270 QFEKIEQFVMTKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDL 327
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------------QKIY-----ATA 176
EAWFP G ++ELVSCSNC DYQ+R L +RY Q K +KIY AT
Sbjct: 328 EAWFPSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKIYVHALNATL 387
Query: 177 CATTRVICAILETHQTETGVRIPDCLRKFVPA 208
CAT R +C ILE +QTETG+ +P+ LRK++P
Sbjct: 388 CATERTLCCILENYQTETGIIVPEVLRKYIPG 419
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 117/159 (73%), Gaps = 13/159 (8%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GIFRVHQFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 264 GIFRVHQFEKIEQFVMTKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAA 321
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKM----------NEKIEFV 415
++K DLEAWFP G ++ELVSCSNC YQ+R L +RY Q K + N+KI +V
Sbjct: 322 SRKNDLEAWFPSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKI-YV 380
Query: 416 HMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPA 454
H LNAT CAT R +C ILE +QTETG+ +P+ LRK++P
Sbjct: 381 HALNATLCATERTLCCILENYQTETGIIVPEVLRKYIPG 419
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 210 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEA 255
>gi|389623987|ref|XP_003709647.1| seryl-tRNA synthetase [Magnaporthe oryzae 70-15]
gi|351649176|gb|EHA57035.1| seryl-tRNA synthetase [Magnaporthe oryzae 70-15]
Length = 497
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 153/217 (70%), Gaps = 17/217 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI H + WL LP+RY G STCFR+E G HGRD G FRVHQFEKV
Sbjct: 233 DKYLIATSEQPISVYHANEWLLPQDLPLRYAGYSTCFRKEAGGHGRDVWGTFRVHQFEKV 292
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M DEMI NSEEFY LG+ YR+V IVSGALN+AAAKK DLEAWFP
Sbjct: 293 EQFCITEP--EKSWEMFDEMIANSEEFYKALGLPYRIVAIVSGALNNAAAKKFDLEAWFP 350
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYG---QTKQK------IYATACATTRVICAILETH 190
G ++ELVSCSNC DYQSR L +R+G QT K + +T AT+R +CA+LE +
Sbjct: 351 FQGEYKELVSCSNCTDYQSRSLEIRFGTKTQTSTKKEYVHCLNSTLTATSRTMCALLENY 410
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPID 226
QTE G ++P+ LRK++P A E IPF K P D
Sbjct: 411 QTEDGFKVPEPLRKYLPG-----APEFIPFTKELPKD 442
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 123/171 (71%), Gaps = 8/171 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G FRVHQFEKVEQF +T P ++SW+ DEMI NSEEFY LG+ YR+V IVSGALN
Sbjct: 279 DVWGTFRVHQFEKVEQFCITEP--EKSWEMFDEMIANSEEFYKALGLPYRIVAIVSGALN 336
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +R+G + + K E+VH LN+T
Sbjct: 337 NAAAKKFDLEAWFPFQGEYKELVSCSNCTDYQSRSLEIRFGTKTQTSTKKEYVHCLNSTL 396
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPID 472
AT+R +CA+LE +QTE G ++P+ LRK++P A E IPF K P D
Sbjct: 397 TATSRTMCALLENYQTEDGFKVPEPLRKYLPG-----APEFIPFTKELPKD 442
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DKYLIATSEQPI H + WL LP+RY G STCFR+E
Sbjct: 233 DKYLIATSEQPISVYHANEWLLPQDLPLRYAGYSTCFRKEA 273
>gi|224096564|ref|XP_002310660.1| predicted protein [Populus trichocarpa]
gi|222853563|gb|EEE91110.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/204 (62%), Positives = 149/204 (73%), Gaps = 16/204 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H+D W+ + LPIRY G S+CFR+E G+HGRDT GIFRVHQF
Sbjct: 66 EGDDKYLIATAEQPLCAYHQDDWIHPSQLPIRYAGCSSCFRKEAGAHGRDTLGIFRVHQF 125
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSP+ ++SW M +EMI+NSEEF +L I Y+VV IVSGALN AAAKK DLE
Sbjct: 126 EKVEQFCITSPNGNDSWDMHEEMIKNSEEFCQELNIPYQVVAIVSGALNDAAAKKYDLEG 185
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----------QKIY-----ATACATT 180
WFP S +RELVSCSNC DYQSRRL +RYGQ K +K Y +T AT
Sbjct: 186 WFPASNTYRELVSCSNCTDYQSRRLEIRYGQKKAMPFLFIEEQVKKQYCHLLNSTLTATE 245
Query: 181 RVICAILETHQTETGVRIPDCLRK 204
R IC ILE +Q E GV IP+ LRK
Sbjct: 246 RTICCILENYQKEDGVGIPEPLRK 269
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 112/155 (72%), Gaps = 7/155 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +TSP+ ++SW +EMI+NSEEF +L I Y+VV IVSGALN
Sbjct: 115 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFCQELNIPYQVVAIVSGALN 174
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKM-------NEKIEFV 415
AAAKK DLE WFP S +RELVSCSNC YQSRRL +RYGQ K M K ++
Sbjct: 175 DAAAKKYDLEGWFPASNTYRELVSCSNCTDYQSRRLEIRYGQKKAMPFLFIEEQVKKQYC 234
Query: 416 HMLNATACATTRVICAILETHQTETGVRIPDCLRK 450
H+LN+T AT R IC ILE +Q E GV IP+ LRK
Sbjct: 235 HLLNSTLTATERTICCILENYQKEDGVGIPEPLRK 269
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DDKYLIAT+EQP+CA H+D W+ + LPIRY G S+CFR+E A
Sbjct: 66 EGDDKYLIATAEQPLCAYHQDDWIHPSQLPIRYAGCSSCFRKEAGA 111
>gi|357113577|ref|XP_003558579.1| PREDICTED: seryl-tRNA synthetase-like [Brachypodium distachyon]
Length = 456
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 158/228 (69%), Gaps = 16/228 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+CA H + A LPIRY G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPADLPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 287
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+D+ SW++ +EMI+NSE+FY ++G+ Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 288 IEQFCVTSPNDNNSWELHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWF 347
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S +RELVSCSNC DYQ+RRL + +GQ K + +T AT R +C ILE
Sbjct: 348 PASKTYRELVSCSNCTDYQARRLGIGFGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 407
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQK 237
Q E GV +P LR F+ + +PF K P+D ++ K K
Sbjct: 408 FQKEDGVEVPKALRPFMGGIDF-----LPFKK--PLDSKQAADSKPNK 448
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 127/181 (70%), Gaps = 7/181 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+D+ SW+ +EMI+NSE+FY ++G+ Y++V+IVSGALN
Sbjct: 275 DTAGIFRVHQFEKIEQFCVTSPNDNNSWELHEEMIKNSEDFYKEIGLPYQLVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S +RELVSCSNC YQ+RRL + +GQ K + +FVHMLN+T
Sbjct: 335 DAAAKKYDLEAWFPASKTYRELVSCSNCTDYQARRLGIGFGQKKNDEQSKQFVHMLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
AT R +C ILE Q E GV +P LR F+ + +PF K P+D ++ K
Sbjct: 395 TATERTLCCILENFQKEDGVEVPKALRPFMGGIDF-----LPFKK--PLDSKQAADSKPN 447
Query: 483 K 483
K
Sbjct: 448 K 448
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
++KYLIATSEQP+CA H + A LPIRY G STCFR+E
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPADLPIRYAGYSTCFRKEA 269
>gi|440639607|gb|ELR09526.1| seryl-tRNA synthetase [Geomyces destructans 20631-21]
Length = 479
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/234 (55%), Positives = 156/234 (66%), Gaps = 16/234 (6%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +DKYLIATSEQPI A H D W+ LPI+Y G STC+R+E GSHGRD GIFRVHQ
Sbjct: 230 DAQNDKYLIATSEQPISAFHADEWIMNKELPIKYAGFSTCYRREAGSHGRDAWGIFRVHQ 289
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEKVEQFVLT P ++SW+ ++MI SE+FY LG+ YRV IVSGALN+AAAKK DLE
Sbjct: 290 FEKVEQFVLTDP--EKSWEAFEDMITVSEDFYKSLGVPYRVAAIVSGALNNAAAKKYDLE 347
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +R+G Q + +T CAT R +C +
Sbjct: 348 AWFPFQGEYKELVSCSNCTDYQSRALEIRFGNKLQTDVKKKYVHALNSTLCATERALCCL 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK-KQKKQKEG 239
LE QTE G +P+ LRK++P + IPF K P D K K K +K G
Sbjct: 408 LENFQTEDGFTVPEPLRKYLP----DAPDFIPFTKELPKDSTSQKAKAKAEKSG 457
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 125/184 (67%), Gaps = 7/184 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQFVLT P ++SW+ ++MI SE+FY LG+ YRV IVSGALN
Sbjct: 280 DAWGIFRVHQFEKVEQFVLTDP--EKSWEAFEDMITVSEDFYKSLGVPYRVAAIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +R+G + + K ++VH LN+T
Sbjct: 338 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRFGNKLQTDVKKKYVHALNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK-KQKK 481
CAT R +C +LE QTE G +P+ LRK++P + IPF K P D K K K
Sbjct: 398 CATERALCCLLENFQTEDGFTVPEPLRKYLP----DAPDFIPFTKELPKDSTSQKAKAKA 453
Query: 482 QKEG 485
+K G
Sbjct: 454 EKSG 457
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D +DKYLIATSEQPI A H D W+ LPI+Y G STC+R+E
Sbjct: 230 DAQNDKYLIATSEQPISAFHADEWIMNKELPIKYAGFSTCYRREA 274
>gi|402221385|gb|EJU01454.1| serine-tRNA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 467
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 157/225 (69%), Gaps = 18/225 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A+H D W P+ LPIRY G STCFR+E GSHG+DT GIFRVHQF
Sbjct: 236 DDKYLIATSEQPISALHSDEWFDQPQTQLPIRYAGYSTCFRKEAGSHGKDTWGIFRVHQF 295
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +T+P ++SW+M ++M+ SE FY LG+ YR+V IVSGALN+AAA K DLEA
Sbjct: 296 EKLEQFCITAP--EKSWEMFNDMVATSEAFYQSLGLPYRLVAIVSGALNNAAAMKYDLEA 353
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP GA++ELVS SNC DYQSRRL +RYG + +K+Y T CAT R +C ++
Sbjct: 354 WFPYQGAYKELVSTSNCTDYQSRRLEIRYGLKQKGDSKKVYVHMLNGTLCATERAMCCLV 413
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKK 232
E +Q E G+RIP+ L+ Y+ IP+VKT P KK
Sbjct: 414 ENYQDENGMRIPEVLQP-----YMQGRTHIPWVKTQPKGSTTVKK 453
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 122/176 (69%), Gaps = 7/176 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T+P ++SW+ ++M+ SE FY LG+ YR+V IVSGALN
Sbjct: 285 DTWGIFRVHQFEKLEQFCITAP--EKSWEMFNDMVATSEAFYQSLGLPYRLVAIVSGALN 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFP GA++ELVS SNC YQSRRL +RYG +K + K +VHMLN T
Sbjct: 343 NAAAMKYDLEAWFPYQGAYKELVSTSNCTDYQSRRLEIRYGLKQKGDSKKVYVHMLNGTL 402
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
CAT R +C ++E +Q E G+RIP+ L+ Y+ IP+VKT P KK
Sbjct: 403 CATERAMCCLVENYQDENGMRIPEVLQP-----YMQGRTHIPWVKTQPKGSTTVKK 453
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
DDKYLIATSEQPI A+H D W P+ LPIRY G STCFR+E
Sbjct: 236 DDKYLIATSEQPISALHSDEWFDQPQTQLPIRYAGYSTCFRKEA 279
>gi|358377445|gb|EHK15129.1| hypothetical protein TRIVIDRAFT_78222 [Trichoderma virens Gv29-8]
Length = 458
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/228 (55%), Positives = 156/228 (68%), Gaps = 18/228 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +DKYLIATSEQPI A H D WL LPI+Y G STC+R+E GSHGRD GI+RVHQ
Sbjct: 230 DSKNDKYLIATSEQPISAFHADEWLQPKDLPIKYAGYSTCYRREAGSHGRDAWGIYRVHQ 289
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQF+L+ P ++SW+ + MI SEEFY LG+ Y+VV IVSGALN AA+KKLDLE
Sbjct: 290 FEKIEQFLLSDP--EKSWEAFESMIAASEEFYQSLGLPYQVVAIVSGALNDAASKKLDLE 347
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +R G Q + +T CATTR +C +
Sbjct: 348 AWFPYQGEYKELVSCSNCTDYQSRALEIRCGTKAQTDIKKKYVHLLNSTLCATTRTLCCV 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
LE +QTE G+R+P+ LRK++P IPF K P +ET QK
Sbjct: 408 LENYQTEDGLRVPEVLRKYLPGA----PDFIPFAKELP---KETPAQK 448
Score = 197 bits (500), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 126/178 (70%), Gaps = 9/178 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GI+RVHQFEK+EQF+L+ P ++SW+ + MI SEEFY LG+ Y+VV IVSGALN
Sbjct: 280 DAWGIYRVHQFEKIEQFLLSDP--EKSWEAFESMIAASEEFYQSLGLPYQVVAIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+KKLDLEAWFP G ++ELVSCSNC YQSR L +R G + + K ++VH+LN+T
Sbjct: 338 DAASKKLDLEAWFPYQGEYKELVSCSNCTDYQSRALEIRCGTKAQTDIKKKYVHLLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
CATTR +C +LE +QTE G+R+P+ LRK++P IPF K P +ET QK
Sbjct: 398 CATTRTLCCVLENYQTEDGLRVPEVLRKYLPGA----PDFIPFAKELP---KETPAQK 448
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 32/45 (71%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D +DKYLIATSEQPI A H D WL LPI+Y G STC+R+E
Sbjct: 230 DSKNDKYLIATSEQPISAFHADEWLQPKDLPIKYAGYSTCYRREA 274
>gi|452841477|gb|EME43414.1| hypothetical protein DOTSEDRAFT_72722 [Dothistroma septosporum
NZE10]
Length = 491
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 160/245 (65%), Gaps = 20/245 (8%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
+ D DKYLIATSEQPI A+H WL + LPI+Y G ST FR+E GSHG+D G+FR+
Sbjct: 234 DNDPASDKYLIATSEQPISAMHEGEWLNDKDLPIKYGGYSTNFRKEAGSHGKDAWGLFRI 293
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEK+EQF+ P D+SW D MI SEEFY L + YRVV IVSGALN+AAAKK D
Sbjct: 294 HQFEKIEQFIFCKP--DDSWTHFDAMINTSEEFYKSLNLPYRVVAIVSGALNNAAAKKYD 351
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK------QKIY-----ATACATTRV 182
LEAWFP G ++ELVSCSNC DYQ+R L VR+GQ K QK Y +T CAT R
Sbjct: 352 LEAWFPFQGEYKELVSCSNCTDYQTRELEVRFGQKKQTDASFQKTYVHALNSTLCATERA 411
Query: 183 ICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK---QKEG 239
+C +LE +QTE G+ +P+ LRKF+P N +PFV+ P K + K K G
Sbjct: 412 LCCVLENYQTEEGLIVPEVLRKFMP----NNEEFLPFVRELPKGSTSLKAKDKADQTKGG 467
Query: 240 MKKKL 244
+K KL
Sbjct: 468 VKPKL 472
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 131/210 (62%), Gaps = 10/210 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FR+HQFEK+EQF+ P D+SW D MI SEEFY L + YRVV IVSGALN
Sbjct: 286 DAWGLFRIHQFEKIEQFIFCKP--DDSWTHFDAMINTSEEFYKSLNLPYRVVAIVSGALN 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE--FVHMLNA 420
+AAAKK DLEAWFP G ++ELVSCSNC YQ+R L VR+GQ K+ + + +VH LN+
Sbjct: 344 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQTRELEVRFGQKKQTDASFQKTYVHALNS 403
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
T CAT R +C +LE +QTE G+ +P+ LRKF+P N +PFV+ P K +
Sbjct: 404 TLCATERALCCVLENYQTEEGLIVPEVLRKFMP----NNEEFLPFVRELPKGSTSLKAKD 459
Query: 481 K--QKEGMKKKVLIDEAMIQNEKDLIATEK 508
K Q +G K L + +A EK
Sbjct: 460 KADQTKGGVKPKLPQAGQVAERPKAVAEEK 489
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 491 LIDEAMIQNEKDLIATEKERNNA-----LREVIGKGEKVGD--------SAPEKDELDDK 537
+++A+IQ + + R N LRE + K ++ + + D DK
Sbjct: 182 FLNQALIQYGMQFLFKKGYRPNQPPYFMLREAMAKTAQLEQFHEELYKVTEKDNDPASDK 241
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
YLIATSEQPI A+H WL + LPI+Y G ST FR+E
Sbjct: 242 YLIATSEQPISAMHEGEWLNDKDLPIKYGGYSTNFRKEA 280
>gi|425766706|gb|EKV05307.1| Seryl-tRNA synthetase [Penicillium digitatum PHI26]
gi|425781844|gb|EKV19785.1| Seryl-tRNA synthetase [Penicillium digitatum Pd1]
Length = 470
Score = 253 bits (647), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 160/235 (68%), Gaps = 17/235 (7%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E GSHG+D GIFRVH
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEAGSHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT P D SW+ ++MI SEEFY L + Y +V IVSGALN+AA+KK DL
Sbjct: 290 QFEKIEQFVLTKPED--SWQAFEDMISTSEEFYQSLKLPYNIVAIVSGALNNAASKKYDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP ++ELVSCSNC DYQSR L +RYG K +K Y +T CAT R +C
Sbjct: 348 EAWFPFQQEYKELVSCSNCTDYQSRALEIRYGVKKATDLKKTYVHALNSTLCATERTLCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQKEG 239
+LE +Q E G+ +P+ LRK++P A E +P+ K P D TK + K ++G
Sbjct: 408 VLENYQKEDGIEVPEVLRKYIPG-----APEFLPYTKELPKDSTSTKAKGKAQKG 457
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 124/184 (67%), Gaps = 8/184 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P D SW+ ++MI SEEFY L + Y +V IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVLTKPED--SWQAFEDMISTSEEFYQSLKLPYNIVAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP ++ELVSCSNC YQSR L +RYG K + K +VH LN+T
Sbjct: 339 NAASKKYDLEAWFPFQQEYKELVSCSNCTDYQSRALEIRYGVKKATDLKKTYVHALNSTL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C +LE +Q E G+ +P+ LRK++P A E +P+ K P D TK + K
Sbjct: 399 CATERTLCCVLENYQKEDGIEVPEVLRKYIPG-----APEFLPYTKELPKDSTSTKAKGK 453
Query: 482 QKEG 485
++G
Sbjct: 454 AQKG 457
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEA 275
>gi|255557773|ref|XP_002519916.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223540962|gb|EEF42520.1| seryl-tRNA synthetase, putative [Ricinus communis]
Length = 447
Score = 253 bits (647), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 150/219 (68%), Gaps = 14/219 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLI T+EQP+CA H D W+ + LPIRY G S+CF +E GSHGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIGTAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFCKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF TSP+ ++SW M +EMI+NSE+FY L I Y+VV IVSGALN AAAKK DLEA
Sbjct: 286 EKVEQFCNTSPNGNDSWAMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S RELVSCSNC DYQSR+L +RYGQ K + +T AT R +C IL
Sbjct: 346 WFPASETCRELVSCSNCTDYQSRKLEIRYGQKKSNEQAKQYVHLLNSTLTATERTLCCIL 405
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
E +Q E G+ IP+ LR VY+ +PF A +
Sbjct: 406 ENYQKENGIEIPEPLR-----VYMGGVSFLPFQNNASTE 439
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 118/170 (69%), Gaps = 5/170 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF TSP+ ++SW +EMI+NSE+FY L I Y+VV IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCNTSPNGNDSWAMHEEMIKNSEDFYKMLNIPYQVVAIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S RELVSCSNC YQSR+L +RYGQ K + ++VH+LN+T
Sbjct: 335 DAAAKKYDLEAWFPASETCRELVSCSNCTDYQSRKLEIRYGQKKSNEQAKQYVHLLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
AT R +C ILE +Q E G+ IP+ LR VY+ +PF A +
Sbjct: 395 TATERTLCCILENYQKENGIEIPEPLR-----VYMGGVSFLPFQNNASTE 439
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DDKYLI T+EQP+CA H D W+ + LPIRY G S+CF +E +
Sbjct: 226 EGDDKYLIGTAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFCKEAGS 271
>gi|119498645|ref|XP_001266080.1| seryl-tRNA synthetase [Neosartorya fischeri NRRL 181]
gi|119414244|gb|EAW24183.1| seryl-tRNA synthetase [Neosartorya fischeri NRRL 181]
Length = 474
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/231 (54%), Positives = 160/231 (69%), Gaps = 17/231 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DKYLIATSEQP+ A+H W+ + LPI+Y G STC+R+E G+HG+D GIFRVHQ
Sbjct: 231 DKSTDKYLIATSEQPLSALHDGEWIQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEKVEQFVLT P + SW++ +EM+ SEEFY LG+ Y+VV IVSGALN+AA+KK DLE
Sbjct: 291 FEKVEQFVLTKPEN--SWQVFEEMMATSEEFYQSLGLPYQVVAIVSGALNNAASKKYDLE 348
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQ+R L +RYG K +K Y AT CAT R +C I
Sbjct: 349 AWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCI 408
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQ 236
LE +QT+ G +P+ LRK++P A E +P+ K P D K + +Q
Sbjct: 409 LENYQTDDGFNVPEALRKYIPG-----APEFLPYTKDLPKDTTSHKSKSRQ 454
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 124/181 (68%), Gaps = 8/181 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQFVLT P + SW+ +EM+ SEEFY LG+ Y+VV IVSGALN
Sbjct: 281 DAWGIFRVHQFEKVEQFVLTKPEN--SWQVFEEMMATSEEFYQSLGLPYQVVAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQ+R L +RYG K + K +VH LNAT
Sbjct: 339 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C ILE +QT+ G +P+ LRK++P A E +P+ K P D K + +
Sbjct: 399 CATERTLCCILENYQTDDGFNVPEALRKYIPG-----APEFLPYTKDLPKDTTSHKSKSR 453
Query: 482 Q 482
Q
Sbjct: 454 Q 454
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+ DKYLIATSEQP+ A+H W+ + LPI+Y G STC+R+E A
Sbjct: 231 DKSTDKYLIATSEQPLSALHDGEWIQDKDLPIKYAGYSTCYRKEAGA 277
>gi|340058897|emb|CCC53268.1| putative seryl-tRNA synthetase [Trypanosoma vivax Y486]
Length = 475
Score = 253 bits (646), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 152/214 (71%), Gaps = 14/214 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DKYLIATSE PI A HR W E + P++Y G+S+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 EDKYLIATSEMPIAAYHRGRWFTELAEPLKYAGLSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF++ SP ++ESW+ L+EMI SEEFY LG+ YRV+NI SGALN AAAKK DLEAWF
Sbjct: 317 LEQFIVCSPREEESWRHLEEMISTSEEFYKSLGLPYRVINICSGALNDAAAKKYDLEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA------------TACATTRVICAI 186
P SG FRELVSCSNC DYQ+R + R+G + + A T CA TR +C I
Sbjct: 377 PASGTFRELVSCSNCTDYQARSVNCRFGPNLRGVAAQNVKEYCHMLNGTLCAVTRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNE--AGEIP 218
E +QTE GV IPD LR ++ + + + AG++P
Sbjct: 437 CENYQTEAGVVIPDVLRPYMMGLDMLKYVAGDVP 470
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 121/170 (71%), Gaps = 11/170 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQF++ SP ++ESW+ L+EMI SEEFY LG+ YRV+NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFIVCSPREEESWRHLEEMISTSEEFYKSLGLPYRVINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKK----MNEKIEFVHML 418
AAAKK DLEAWFP SG FRELVSCSNC YQ+R + R+G + N K E+ HML
Sbjct: 364 DAAAKKYDLEAWFPASGTFRELVSCSNCTDYQARSVNCRFGPNLRGVAAQNVK-EYCHML 422
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAV----YVNEAGEIP 464
N T CA TR +C I E +QTE GV IPD LR ++ + YV AG++P
Sbjct: 423 NGTLCAVTRTMCCICENYQTEAGVVIPDVLRPYMMGLDMLKYV--AGDVP 470
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+DKYLIATSE PI A HR W E + P++Y G+S+CFR+E A
Sbjct: 257 EDKYLIATSEMPIAAYHRGRWFTELAEPLKYAGLSSCFRKEAGA 300
>gi|226499136|ref|NP_001140663.1| seryl-tRNA synthetase isoform 1 [Zea mays]
gi|194700466|gb|ACF84317.1| unknown [Zea mays]
gi|414591450|tpg|DAA42021.1| TPA: seryl-tRNA synthetase isoform 1 [Zea mays]
gi|414591451|tpg|DAA42022.1| TPA: seryl-tRNA synthetase isoform 2 [Zea mays]
gi|414591452|tpg|DAA42023.1| TPA: seryl-tRNA synthetase isoform 3 [Zea mays]
Length = 458
Score = 253 bits (645), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 155/217 (71%), Gaps = 16/217 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DKYLIATSEQP+CA H + A LPI+Y G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 230 EDKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 289
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+D++SW+M +EM++NSE++Y ++G+ Y+VV+IVSGALN AAAKK DLEAWF
Sbjct: 290 IEQFCITSPNDNDSWEMHEEMLKNSEDYYKEIGLPYQVVSIVSGALNDAAAKKYDLEAWF 349
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S FRELVSCSNC D+QSRRL + YGQ K + +T AT R +C ILE
Sbjct: 350 PASKTFRELVSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 409
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
Q E GV +P L+ ++ + +PF + P+D
Sbjct: 410 FQKEDGVEVPKALQPYMGGIEF-----LPFKQ--PLD 439
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 117/153 (76%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+D++SW+ +EM++NSE++Y ++G+ Y+VV+IVSGALN
Sbjct: 277 DTAGIFRVHQFEKIEQFCITSPNDNDSWEMHEEMLKNSEDYYKEIGLPYQVVSIVSGALN 336
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S FRELVSCSNC +QSRRL + YGQ K + +FVHMLN+T
Sbjct: 337 DAAAKKYDLEAWFPASKTFRELVSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTL 396
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
AT R +C ILE Q E GV +P L+ ++ +
Sbjct: 397 TATERTLCCILENFQKEDGVEVPKALQPYMGGI 429
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+DKYLIATSEQP+CA H + A LPI+Y G STCFR+E
Sbjct: 230 EDKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEA 271
>gi|147801318|emb|CAN77028.1| hypothetical protein VITISV_015339 [Vitis vinifera]
Length = 466
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 154/218 (70%), Gaps = 14/218 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ + LP+RY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 262 EGDDKYLIATAEQPLCAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 321
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +TSP+ ++SW M +EMI+NSE+FY L I Y+VV IVSGALN AAAKK DLE
Sbjct: 322 EKVEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEG 381
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACATTRVICAILETHQTETGV 196
WFP S +RELVSCSNC DYQSRRL +RYGQ KQ +A A L+ +Q E GV
Sbjct: 382 WFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKQLRGPSA--------ASLKNYQKEDGV 433
Query: 197 RIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
+P+ LR F+ +PF +T+P E + KK K
Sbjct: 434 EVPEPLRPFMGGKTF-----LPF-QTSPATEAKGKKSK 465
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 114/178 (64%), Gaps = 23/178 (12%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +TSP+ ++SW +EMI+NSE+FY L I Y+VV IVSGALN
Sbjct: 311 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLE WFP S +RELVSCSNC YQSRRL +RYGQ K+ L +
Sbjct: 371 DAAAKKYDLEGWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKQ----------LRGPS 420
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
A+ L+ +Q E GV +P+ LR F+ +PF +T+P E + KK K
Sbjct: 421 AAS-------LKNYQKEDGVEVPEPLRPFMGGKTF-----LPF-QTSPATEAKGKKSK 465
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DDKYLIAT+EQP+CA H D W+ + LP+RY G S+CFR+E +
Sbjct: 262 EGDDKYLIATAEQPLCAYHLDDWIHPSQLPLRYAGYSSCFRKEAGS 307
>gi|342881261|gb|EGU82179.1| hypothetical protein FOXB_07310 [Fusarium oxysporum Fo5176]
Length = 477
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/218 (55%), Positives = 152/218 (69%), Gaps = 19/218 (8%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+YLIATSEQP+ A+H + W+ + LPI+Y G STCFR+E GSHGRD G+FRVHQFEKV
Sbjct: 241 DRYLIATSEQPLSALHAEEWIQPSELPIKYCGYSTCFRKEAGSHGRDAWGVFRVHQFEKV 300
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQFVL P D+SW D+M+ NSEEFY LG+ Y+VV IV+GALN+AAAKK DLEAWFP
Sbjct: 301 EQFVLCGP--DDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAAKKYDLEAWFP 358
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------------IYATACATTRVICAI 186
++ELVSCSNC DYQ+R L +R+G K K + AT CAT R +C I
Sbjct: 359 FQKEYKELVSCSNCTDYQTRELEIRHGSKKGKQIVGGGKKEYVHALNATLCATERTLCCI 418
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
LE +QTE G+ +P+ LRK++P E +PF+K P
Sbjct: 419 LENYQTEEGLVVPEVLRKYIPG----EPEFLPFIKETP 452
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 119/172 (69%), Gaps = 10/172 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEKVEQFVL P D+SW D+M+ NSEEFY LG+ Y+VV IV+GALN
Sbjct: 287 DAWGVFRVHQFEKVEQFVLCGP--DDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALN 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKM----NEKIEFVHML 418
+AAAKK DLEAWFP ++ELVSCSNC YQ+R L +R+G K K E+VH L
Sbjct: 345 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQTRELEIRHGSKKGKQIVGGGKKEYVHAL 404
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
NAT CAT R +C ILE +QTE G+ +P+ LRK++P E +PF+K P
Sbjct: 405 NATLCATERTLCCILENYQTEEGLVVPEVLRKYIPG----EPEFLPFIKETP 452
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+YLIATSEQP+ A+H + W+ + LPI+Y G STCFR+E +
Sbjct: 241 DRYLIATSEQPLSALHAEEWIQPSELPIKYCGYSTCFRKEAGS 283
>gi|115438574|ref|XP_001218101.1| seryl-tRNA synthetase [Aspergillus terreus NIH2624]
gi|114188916|gb|EAU30616.1| seryl-tRNA synthetase [Aspergillus terreus NIH2624]
Length = 473
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 155/220 (70%), Gaps = 15/220 (6%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E G+HG+D GIFRVHQ
Sbjct: 231 DKSTDKYLIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQFV+T+P ++SW+ +EM+ SEEFY LG+ Y++V IVSGALN+AA+KK DLE
Sbjct: 291 FEKIEQFVITNP--EKSWEAFEEMMATSEEFYQSLGLPYQIVAIVSGALNNAASKKYDLE 348
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQ+R L +RYG KQ K Y AT CAT R +C I
Sbjct: 349 AWFPFQGEYKELVSCSNCTDYQARALEIRYGIKKQTDAKKTYVHALNATLCATERTLCCI 408
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
LE +QTE G +P+ LRK++P +PF K P D
Sbjct: 409 LENYQTEEGFIVPEPLRKYIPG----SPEFLPFTKELPKD 444
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 121/170 (71%), Gaps = 6/170 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV+T+P ++SW+ +EM+ SEEFY LG+ Y++V IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVITNP--EKSWEAFEEMMATSEEFYQSLGLPYQIVAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQ+R L +RYG K+ + K +VH LNAT
Sbjct: 339 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQARALEIRYGIKKQTDAKKTYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CAT R +C ILE +QTE G +P+ LRK++P +PF K P D
Sbjct: 399 CATERTLCCILENYQTEEGFIVPEPLRKYIPG----SPEFLPFTKELPKD 444
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E A
Sbjct: 231 DKSTDKYLIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEAGA 277
>gi|402081117|gb|EJT76262.1| seryl-tRNA synthetase [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 489
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 150/216 (69%), Gaps = 15/216 (6%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI H + WL LP++Y G STCFR+E G HGRD G FRVHQFEKV
Sbjct: 233 DKYLIATSEQPISVYHANEWLLPQDLPLKYAGYSTCFRKEAGGHGRDVWGTFRVHQFEKV 292
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M DEMI NSEEFY LG+ YRVV+IVSGALN+AAAKK DLEAWFP
Sbjct: 293 EQFCITDP--EKSWEMFDEMIANSEEFYKGLGLPYRVVSIVSGALNNAAAKKFDLEAWFP 350
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILETH 190
G ++ELVSCSNC DYQSR L +R+G Q + +T AT+R +C +LE +
Sbjct: 351 FQGEYKELVSCSNCTDYQSRSLDIRFGTKTQTTTKKSYVHCLNSTLTATSRTMCCLLENY 410
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
QTETG ++P+ LRK++P IPF + P D
Sbjct: 411 QTETGFKVPEPLRKYLPGA----PDFIPFTRELPKD 442
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 120/170 (70%), Gaps = 6/170 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G FRVHQFEKVEQF +T P ++SW+ DEMI NSEEFY LG+ YRVV+IVSGALN
Sbjct: 279 DVWGTFRVHQFEKVEQFCITDP--EKSWEMFDEMIANSEEFYKGLGLPYRVVSIVSGALN 336
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +R+G + K +VH LN+T
Sbjct: 337 NAAAKKFDLEAWFPFQGEYKELVSCSNCTDYQSRSLDIRFGTKTQTTTKKSYVHCLNSTL 396
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
AT+R +C +LE +QTETG ++P+ LRK++P IPF + P D
Sbjct: 397 TATSRTMCCLLENYQTETGFKVPEPLRKYLPGA----PDFIPFTRELPKD 442
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 29/41 (70%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DKYLIATSEQPI H + WL LP++Y G STCFR+E
Sbjct: 233 DKYLIATSEQPISVYHANEWLLPQDLPLKYAGYSTCFRKEA 273
>gi|70998718|ref|XP_754081.1| seryl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|66851717|gb|EAL92043.1| seryl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|159126185|gb|EDP51301.1| seryl-tRNA synthetase [Aspergillus fumigatus A1163]
Length = 474
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 125/231 (54%), Positives = 160/231 (69%), Gaps = 17/231 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DKYLIATSEQP+ A+H W+ + LPI+Y G STC+R+E G+HG+D GIFRVHQ
Sbjct: 231 DKSTDKYLIATSEQPLSALHDGEWIQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQ 290
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEKVEQFVLT P + SW++ +EM+ SEEFY LG+ Y+VV IVSGALN+AA+KK DLE
Sbjct: 291 FEKVEQFVLTKPEN--SWQVFEEMMATSEEFYQSLGLPYQVVAIVSGALNNAASKKYDLE 348
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQ+R L +RYG K +K Y AT CAT R +C I
Sbjct: 349 AWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCI 408
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQ 236
LE +QT+ G +P+ LRK++P A E +P+ K P D K + +Q
Sbjct: 409 LENYQTDDGFNVPEPLRKYIPG-----APEFLPYTKDLPKDTTSHKSKSRQ 454
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 124/181 (68%), Gaps = 8/181 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQFVLT P + SW+ +EM+ SEEFY LG+ Y+VV IVSGALN
Sbjct: 281 DAWGIFRVHQFEKVEQFVLTKPEN--SWQVFEEMMATSEEFYQSLGLPYQVVAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQ+R L +RYG K + K +VH LNAT
Sbjct: 339 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C ILE +QT+ G +P+ LRK++P A E +P+ K P D K + +
Sbjct: 399 CATERTLCCILENYQTDDGFNVPEPLRKYIPG-----APEFLPYTKDLPKDTTSHKSKSR 453
Query: 482 Q 482
Q
Sbjct: 454 Q 454
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+ DKYLIATSEQP+ A+H W+ + LPI+Y G STC+R+E A
Sbjct: 231 DKSTDKYLIATSEQPLSALHDGEWIQDKDLPIKYAGYSTCYRKEAGA 277
>gi|218192264|gb|EEC74691.1| hypothetical protein OsI_10395 [Oryza sativa Indica Group]
Length = 445
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 148/200 (74%), Gaps = 9/200 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+CA H + A LPIRY G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 287
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+D+ESW+M +EMI+NSE+FY ++G+ Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 288 IEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWF 347
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S +RELVSCSNC D+Q+RRL + YGQ K + +T AT R +C ILE
Sbjct: 348 PASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 407
Query: 190 HQTETGVRIPDCLRKFVPAV 209
Q E GV +P L+ ++ +
Sbjct: 408 FQKENGVEVPKALQPYMGGI 427
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 117/153 (76%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+D+ESW+ +EMI+NSE+FY ++G+ Y++V+IVSGALN
Sbjct: 275 DTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S +RELVSCSNC +Q+RRL + YGQ K + +FVHMLN+T
Sbjct: 335 DAAAKKYDLEAWFPASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
AT R +C ILE Q E GV +P L+ ++ +
Sbjct: 395 TATERTLCCILENFQKENGVEVPKALQPYMGGI 427
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSEQP+CA H + A LPIRY G STCFR+E +
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGS 271
>gi|83764980|dbj|BAE55124.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391862938|gb|EIT72260.1| Seryl-tRNA synthetase [Aspergillus oryzae 3.042]
Length = 494
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/232 (53%), Positives = 160/232 (68%), Gaps = 17/232 (7%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E G+HG+D GIFRVH
Sbjct: 250 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVH 309
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT P ++SW+ +EM+ SEEFY LG+ Y++V IVSGALN+AA+KK DL
Sbjct: 310 QFEKIEQFVLTKP--EQSWEAFEEMMATSEEFYKSLGLPYQIVTIVSGALNNAASKKYDL 367
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQ+R L +RYG K +K Y AT CAT R +C
Sbjct: 368 EAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCC 427
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQ 236
ILE +Q E G +P+ LRK++P A E +P+ K P D K + KQ
Sbjct: 428 ILENYQKEDGFIVPEPLRKYIPG-----APEFLPYTKELPKDSTSQKAKGKQ 474
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 124/181 (68%), Gaps = 8/181 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P ++SW+ +EM+ SEEFY LG+ Y++V IVSGALN
Sbjct: 301 DAWGIFRVHQFEKIEQFVLTKP--EQSWEAFEEMMATSEEFYKSLGLPYQIVTIVSGALN 358
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQ+R L +RYG K + K +VH LNAT
Sbjct: 359 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATL 418
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C ILE +Q E G +P+ LRK++P A E +P+ K P D K + K
Sbjct: 419 CATERTLCCILENYQKEDGFIVPEPLRKYIPG-----APEFLPYTKELPKDSTSQKAKGK 473
Query: 482 Q 482
Q
Sbjct: 474 Q 474
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E A
Sbjct: 250 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGA 297
>gi|238503390|ref|XP_002382928.1| seryl-tRNA synthetase [Aspergillus flavus NRRL3357]
gi|317138770|ref|XP_001817126.2| seryl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
gi|220690399|gb|EED46748.1| seryl-tRNA synthetase [Aspergillus flavus NRRL3357]
Length = 474
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/232 (53%), Positives = 160/232 (68%), Gaps = 17/232 (7%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E G+HG+D GIFRVH
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT P ++SW+ +EM+ SEEFY LG+ Y++V IVSGALN+AA+KK DL
Sbjct: 290 QFEKIEQFVLTKP--EQSWEAFEEMMATSEEFYKSLGLPYQIVTIVSGALNNAASKKYDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQ+R L +RYG K +K Y AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQ 236
ILE +Q E G +P+ LRK++P A E +P+ K P D K + KQ
Sbjct: 408 ILENYQKEDGFIVPEPLRKYIPG-----APEFLPYTKELPKDSTSQKAKGKQ 454
Score = 199 bits (506), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 124/181 (68%), Gaps = 8/181 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P ++SW+ +EM+ SEEFY LG+ Y++V IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVLTKP--EQSWEAFEEMMATSEEFYKSLGLPYQIVTIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQ+R L +RYG K + K +VH LNAT
Sbjct: 339 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C ILE +Q E G +P+ LRK++P A E +P+ K P D K + K
Sbjct: 399 CATERTLCCILENYQKEDGFIVPEPLRKYIPG-----APEFLPYTKELPKDSTSQKAKGK 453
Query: 482 Q 482
Q
Sbjct: 454 Q 454
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E A
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGA 277
>gi|115451355|ref|NP_001049278.1| Os03g0198400 [Oryza sativa Japonica Group]
gi|108706679|gb|ABF94474.1| Seryl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547749|dbj|BAF11192.1| Os03g0198400 [Oryza sativa Japonica Group]
gi|215736959|dbj|BAG95888.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765322|dbj|BAG87019.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624378|gb|EEE58510.1| hypothetical protein OsJ_09790 [Oryza sativa Japonica Group]
Length = 445
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 148/200 (74%), Gaps = 9/200 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+CA H + A LPIRY G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 287
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+D+ESW+M +EMI+NSE+FY ++G+ Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 288 IEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWF 347
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S +RELVSCSNC D+Q+RRL + YGQ K + +T AT R +C ILE
Sbjct: 348 PASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 407
Query: 190 HQTETGVRIPDCLRKFVPAV 209
Q E GV +P L+ ++ +
Sbjct: 408 FQRENGVEVPKALQPYMGGI 427
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 117/153 (76%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+D+ESW+ +EMI+NSE+FY ++G+ Y++V+IVSGALN
Sbjct: 275 DTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S +RELVSCSNC +Q+RRL + YGQ K + +FVHMLN+T
Sbjct: 335 DAAAKKYDLEAWFPASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
AT R +C ILE Q E GV +P L+ ++ +
Sbjct: 395 TATERTLCCILENFQRENGVEVPKALQPYMGGI 427
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSEQP+CA H + A LPIRY G STCFR+E +
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGS 271
>gi|326519877|dbj|BAK03863.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 156/226 (69%), Gaps = 16/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DKYLIATSEQP+CA H + A LPIRY G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 228 EDKYLIATSEQPLCAYHLGDRIYPADLPIRYAGFSTCFRKEAGSHGRDTAGIFRVHQFEK 287
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF T+P+D+ SW+M +EMI+N+E+FY +G+ Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 288 IEQFCATNPNDNVSWEMHEEMIKNAEDFYQAIGLPYQLVSIVSGALNDAAAKKYDLEAWF 347
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S FRELVSCSNC DYQ+RRL + YGQ K + +T AT R +C ILE
Sbjct: 348 PASKTFRELVSCSNCTDYQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 407
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
+Q E GV +P LR F+ + +PF + P+D ++ K
Sbjct: 408 YQREGGVEVPVVLRPFMLGIDF-----LPFKR--PLDSKQAAADSK 446
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 125/179 (69%), Gaps = 7/179 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF T+P+D+ SW+ +EMI+N+E+FY +G+ Y++V+IVSGALN
Sbjct: 275 DTAGIFRVHQFEKIEQFCATNPNDNVSWEMHEEMIKNAEDFYQAIGLPYQLVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S FRELVSCSNC YQ+RRL + YGQ K + +FVHMLN+T
Sbjct: 335 DAAAKKYDLEAWFPASKTFRELVSCSNCTDYQARRLGIGYGQKKNDEQSKQFVHMLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
AT R +C ILE +Q E GV +P LR F+ + +PF + P+D ++ K
Sbjct: 395 TATERTLCCILENYQREGGVEVPVVLRPFMLGIDF-----LPFKR--PLDSKQAAADSK 446
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 31/42 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+DKYLIATSEQP+CA H + A LPIRY G STCFR+E
Sbjct: 228 EDKYLIATSEQPLCAYHLGDRIYPADLPIRYAGFSTCFRKEA 269
>gi|326468899|gb|EGD92908.1| seryl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
Length = 473
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 159/234 (67%), Gaps = 18/234 (7%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E G+HG+D GIFRVH
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN+AA+KKLDL
Sbjct: 290 QFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQ+R L +R+G K + AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEG 239
ILE +Q E G+ +P+ LRK++P +P+V+ P D T QK + +G
Sbjct: 408 ILENYQQEDGIVVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKG 454
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 125/183 (68%), Gaps = 9/183 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFP G ++ELVSCSNC YQ+R L +R+G K + K + H LNAT
Sbjct: 339 NAASKKLDLEAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +Q E G+ +P+ LRK++P +P+V+ P D T QK +
Sbjct: 399 CATERALCCILENYQQEDGIVVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVK 451
Query: 483 KEG 485
+G
Sbjct: 452 AKG 454
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E A
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGA 277
>gi|327301447|ref|XP_003235416.1| seryl-tRNA synthetase [Trichophyton rubrum CBS 118892]
gi|326462768|gb|EGD88221.1| seryl-tRNA synthetase [Trichophyton rubrum CBS 118892]
Length = 473
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 159/234 (67%), Gaps = 18/234 (7%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E G+HG+D GIFRVH
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN+AA+KKLDL
Sbjct: 290 QFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQ+R L +R+G K + AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEG 239
ILE +Q E G+ +P+ LRK++P +P+V+ P D T QK + +G
Sbjct: 408 ILENYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKG 454
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 125/183 (68%), Gaps = 9/183 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFP G ++ELVSCSNC YQ+R L +R+G K + K + H LNAT
Sbjct: 339 NAASKKLDLEAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +Q E G+ +P+ LRK++P +P+V+ P D T QK +
Sbjct: 399 CATERALCCILENYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVK 451
Query: 483 KEG 485
+G
Sbjct: 452 AKG 454
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E A
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGA 277
>gi|315049187|ref|XP_003173968.1| seryl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311341935|gb|EFR01138.1| seryl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 473
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 159/234 (67%), Gaps = 18/234 (7%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E G+HG+D GIFRVH
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN+AA+KKLDL
Sbjct: 290 QFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQ+R L +R+G K + AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEG 239
ILE +Q E G+ +P+ LRK++P +P+V+ P D T QK + +G
Sbjct: 408 ILENYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKG 454
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 125/183 (68%), Gaps = 9/183 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFP G ++ELVSCSNC YQ+R L +R+G K + K + H LNAT
Sbjct: 339 NAASKKLDLEAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +Q E G+ +P+ LRK++P +P+V+ P D T QK +
Sbjct: 399 CATERALCCILENYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVK 451
Query: 483 KEG 485
+G
Sbjct: 452 AKG 454
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E A
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGA 277
>gi|242041875|ref|XP_002468332.1| hypothetical protein SORBIDRAFT_01g043930 [Sorghum bicolor]
gi|241922186|gb|EER95330.1| hypothetical protein SORBIDRAFT_01g043930 [Sorghum bicolor]
Length = 458
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 154/217 (70%), Gaps = 16/217 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DKYLIATSEQP+CA H + A LPI+Y G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 230 EDKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 289
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+ ++SW+M +EM++NSE+FY ++G+ Y+VV+IVSGALN AAAKK DLEAWF
Sbjct: 290 IEQFCITSPNGNDSWEMHEEMLKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYDLEAWF 349
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S FRELVSCSNC D+QSRRL + YGQ K + +T AT R +C ILE
Sbjct: 350 PASKTFRELVSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 409
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
Q E GV +P L+ ++ + +PF + P+D
Sbjct: 410 FQKEDGVEVPKALQPYMGGIEF-----LPFKQ--PLD 439
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 116/153 (75%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+ ++SW+ +EM++NSE+FY ++G+ Y+VV+IVSGALN
Sbjct: 277 DTAGIFRVHQFEKIEQFCITSPNGNDSWEMHEEMLKNSEDFYKEIGLPYQVVSIVSGALN 336
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S FRELVSCSNC +QSRRL + YGQ K + +FVHMLN+T
Sbjct: 337 DAAAKKYDLEAWFPASKTFRELVSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTL 396
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
AT R +C ILE Q E GV +P L+ ++ +
Sbjct: 397 TATERTLCCILENFQKEDGVEVPKALQPYMGGI 429
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+DKYLIATSEQP+CA H + A LPI+Y G STCFR+E
Sbjct: 230 EDKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEA 271
>gi|345560032|gb|EGX43161.1| hypothetical protein AOL_s00215g617 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/234 (53%), Positives = 156/234 (66%), Gaps = 15/234 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSEQPI A+H D W A +P RY G S+C+R+E GSHG+D GIFRVHQFEK
Sbjct: 232 DEKYLIATSEQPISALHADEWFTTADVPKRYAGFSSCYRREAGSHGKDAWGIFRVHQFEK 291
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFVL P ++SW+ D+MI SEEFY LG+ YRVV IVSGALN+AA+KK DLEAWF
Sbjct: 292 VEQFVLCDP--EKSWEEFDKMISYSEEFYRSLGLPYRVVAIVSGALNNAASKKYDLEAWF 349
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P G ++ELVSCSNC DYQSR L +RYG Q + +T AT R +C ILE
Sbjct: 350 PFQGEYKELVSCSNCTDYQSRSLEIRYGAKTQTDTVKKYVHALNSTLTATERAMCCILEN 409
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
+QT G +P+ LRK++P +PF K P D KK+ +Q + + KK
Sbjct: 410 YQTPEGFNVPEVLRKYLPG----NPEFLPFTKELPKDTTSEKKKNQQLKVVGKK 459
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 125/187 (66%), Gaps = 6/187 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQFVL P ++SW+ D+MI SEEFY LG+ YRVV IVSGALN
Sbjct: 279 DAWGIFRVHQFEKVEQFVLCDP--EKSWEEFDKMISYSEEFYRSLGLPYRVVAIVSGALN 336
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQSR L +RYG + + ++VH LN+T
Sbjct: 337 NAASKKYDLEAWFPFQGEYKELVSCSNCTDYQSRSLEIRYGAKTQTDTVKKYVHALNSTL 396
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
AT R +C ILE +QT G +P+ LRK++P +PF K P D KK+ +Q
Sbjct: 397 TATERAMCCILENYQTPEGFNVPEVLRKYLPG----NPEFLPFTKELPKDTTSEKKKNQQ 452
Query: 483 KEGMKKK 489
+ + KK
Sbjct: 453 LKVVGKK 459
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+KYLIATSEQPI A+H D W A +P RY G S+C+R+E
Sbjct: 232 DEKYLIATSEQPISALHADEWFTTADVPKRYAGFSSCYRREA 273
>gi|115437620|ref|NP_001043340.1| Os01g0559100 [Oryza sativa Japonica Group]
gi|57899337|dbj|BAD87948.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|57900427|dbj|BAD87663.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|113532871|dbj|BAF05254.1| Os01g0559100 [Oryza sativa Japonica Group]
Length = 425
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 148/200 (74%), Gaps = 9/200 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+CA H + A LPIRY G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 208 EEKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 267
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+D+ESW+M +EMI+NSE+FY ++G+ Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 268 IEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWF 327
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S +RELVSCSNC D+Q+RRL + YGQ K + +T AT R +C ILE
Sbjct: 328 PASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 387
Query: 190 HQTETGVRIPDCLRKFVPAV 209
Q E GV +P L+ ++ +
Sbjct: 388 FQKENGVEVPKALQPYMGGI 407
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 117/153 (76%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+D+ESW+ +EMI+NSE+FY ++G+ Y++V+IVSGALN
Sbjct: 255 DTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALN 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S +RELVSCSNC +Q+RRL + YGQ K + +FVHMLN+T
Sbjct: 315 DAAAKKYDLEAWFPASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTL 374
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
AT R +C ILE Q E GV +P L+ ++ +
Sbjct: 375 TATERTLCCILENFQKENGVEVPKALQPYMGGI 407
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSEQP+CA H + A LPIRY G STCFR+E +
Sbjct: 208 EEKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGS 251
>gi|328856864|gb|EGG05983.1| hypothetical protein MELLADRAFT_77928 [Melampsora larici-populina
98AG31]
Length = 451
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 152/217 (70%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQP+ A+H D W P+ LP+RY G STCFR+E GSHGRDT GIFRVHQF
Sbjct: 238 DDKYLIATSEQPLSALHADEWFENPKEQLPLRYAGYSTCFRKEAGSHGRDTWGIFRVHQF 297
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +T P SW+M +EM+ +SE FY LG++YRVV IVSGALN+AAAKK+DLEA
Sbjct: 298 EKIEQFCVTDPSS--SWEMFEEMVASSEAFYQSLGLSYRVVGIVSGALNNAAAKKIDLEA 355
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP G ++ELVS SNC DYQSR L VR G K QK+Y T CAT R +C ++
Sbjct: 356 WFPSMGEYKELVSVSNCTDYQSRSLEVRCGIKKQGDTQKVYVHMLNGTLCATERALCCLV 415
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+ IP+ L+ Y+ +PFVK AP
Sbjct: 416 ENYQTPEGMNIPEVLQP-----YMRNRTFLPFVKEAP 447
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 117/168 (69%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P SW+ +EM+ +SE FY LG++YRVV IVSGALN
Sbjct: 287 DTWGIFRVHQFEKIEQFCVTDPSS--SWEMFEEMVASSEAFYQSLGLSYRVVGIVSGALN 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK+DLEAWFP G ++ELVS SNC YQSR L VR G K+ + + +VHMLN T
Sbjct: 345 NAAAKKIDLEAWFPSMGEYKELVSVSNCTDYQSRSLEVRCGIKKQGDTQKVYVHMLNGTL 404
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
CAT R +C ++E +QT G+ IP+ L+ Y+ +PFVK AP
Sbjct: 405 CATERALCCLVENYQTPEGMNIPEVLQP-----YMRNRTFLPFVKEAP 447
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
DDKYLIATSEQP+ A+H D W P+ LP+RY G STCFR+E +
Sbjct: 238 DDKYLIATSEQPLSALHADEWFENPKEQLPLRYAGYSTCFRKEAGS 283
>gi|388581181|gb|EIM21491.1| serine-tRNA ligase [Wallemia sebi CBS 633.66]
Length = 454
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 158/230 (68%), Gaps = 22/230 (9%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A+ + W P+ LPIR G STCFR+E G HG+DT GIFRVHQF
Sbjct: 236 DDKYLIATSEQPISAMFANEWFEKPQDQLPIRMAGYSTCFRKEAGKHGKDTWGIFRVHQF 295
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +TSP ++SW+M DEM+ NSEEFY LGI YR+VNIVSGALN+AAA+K DLEA
Sbjct: 296 EKIEQFCVTSP--EKSWEMFDEMVNNSEEFYQSLGIPYRLVNIVSGALNNAAAQKYDLEA 353
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAIL 187
WFP G ++ELVS SNC DYQSR L VR+G KQ K Y T CAT R +C ++
Sbjct: 354 WFPYLGEWKELVSTSNCTDYQSRSLEVRHGIKKQGETNKTYVHMLNGTMCATERAMCCLV 413
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQK 237
E Q E G+ +P LRK Y+++ IPFVK P +TK K +K
Sbjct: 414 ENWQNEEGLVVPPVLRK-----YMDDREFIPFVKELP----KTKANKSKK 454
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/181 (55%), Positives = 125/181 (69%), Gaps = 11/181 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP ++SW+ DEM+ NSEEFY LGI YR+VNIVSGALN
Sbjct: 285 DTWGIFRVHQFEKIEQFCVTSP--EKSWEMFDEMVNNSEEFYQSLGIPYRLVNIVSGALN 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA+K DLEAWFP G ++ELVS SNC YQSR L VR+G K+ +VHMLN T
Sbjct: 343 NAAAQKYDLEAWFPYLGEWKELVSTSNCTDYQSRSLEVRHGIKKQGETNKTYVHMLNGTM 402
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ++E Q E G+ +P LRK Y+++ IPFVK P +TK K +
Sbjct: 403 CATERAMCCLVENWQNEEGLVVPPVLRK-----YMDDREFIPFVKELP----KTKANKSK 453
Query: 483 K 483
K
Sbjct: 454 K 454
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
DDKYLIATSEQPI A+ + W P+ LPIR G STCFR+E
Sbjct: 236 DDKYLIATSEQPISAMFANEWFEKPQDQLPIRMAGYSTCFRKEA 279
>gi|393216541|gb|EJD02031.1| seryl-tRNA synthetase [Fomitiporia mediterranea MF3/22]
Length = 452
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 153/217 (70%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A++ D W P+A LPIRY G STCFR+E G+ GRD GIFRVHQF
Sbjct: 235 DDKYLIATSEQPISAMYADEWFEDPKAQLPIRYAGYSTCFRKEAGAAGRDMWGIFRVHQF 294
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV+T P + SW+ML+ MI+ +E FY LG+ YRVV IVSGALN AAA+K DLEA
Sbjct: 295 EKVEQFVITEPEN--SWEMLESMIEVAEAFYQSLGLPYRVVAIVSGALNLAAAQKYDLEA 352
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAIL 187
WFP GA++ELVSCSNC DYQSRRL VR G KQ K+Y T CAT R +C +
Sbjct: 353 WFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKKQDQTRKLYVHMLNGTLCATERALCCLA 412
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+R+P+ LR Y+ G +P+VK P
Sbjct: 413 ENYQTPEGLRVPEALRP-----YMGGRGFLPWVKELP 444
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 118/171 (69%), Gaps = 7/171 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQFV+T P + SW+ L+ MI+ +E FY LG+ YRVV IVSG
Sbjct: 281 AGRDMWGIFRVHQFEKVEQFVITEPEN--SWEMLESMIEVAEAFYQSLGLPYRVVAIVSG 338
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAA+K DLEAWFP GA++ELVSCSNC YQSRRL VR G K+ + +VHMLN
Sbjct: 339 ALNLAAAQKYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKKQDQTRKLYVHMLN 398
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
T CAT R +C + E +QT G+R+P+ LR Y+ G +P+VK P
Sbjct: 399 GTLCATERALCCLAENYQTPEGLRVPEALRP-----YMGGRGFLPWVKELP 444
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
DDKYLIATSEQPI A++ D W P+A LPIRY G STCFR+E A
Sbjct: 235 DDKYLIATSEQPISAMYADEWFEDPKAQLPIRYAGYSTCFRKEAGAA 281
>gi|255943689|ref|XP_002562612.1| Pc20g00490 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587347|emb|CAP85378.1| Pc20g00490 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 470
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 159/235 (67%), Gaps = 17/235 (7%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E GSHG+D GIFRVH
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEAGSHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFVLT P D SW+ ++M+ SEEFY L + Y +V IVSGALN+AA+KK DL
Sbjct: 290 QFEKIEQFVLTKPED--SWQAFEDMMNTSEEFYQSLKLPYNIVAIVSGALNNAASKKYDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP ++ELVSCSNC DYQ+R L +RYG K +K Y +T CAT R +C
Sbjct: 348 EAWFPFQQEYKELVSCSNCTDYQARALEIRYGAKKATDLKKTYVHALNSTLCATERTLCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQKEG 239
+LE +Q E G+ +P+ LRK++P A E +P+ K P D +K + K +G
Sbjct: 408 VLENYQKEDGIEVPEVLRKYIPG-----APEFLPYTKELPKDTTSSKAKAKANKG 457
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 123/184 (66%), Gaps = 8/184 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFVLT P D SW+ ++M+ SEEFY L + Y +V IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFVLTKPED--SWQAFEDMMNTSEEFYQSLKLPYNIVAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP ++ELVSCSNC YQ+R L +RYG K + K +VH LN+T
Sbjct: 339 NAASKKYDLEAWFPFQQEYKELVSCSNCTDYQARALEIRYGAKKATDLKKTYVHALNSTL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CAT R +C +LE +Q E G+ +P+ LRK++P A E +P+ K P D +K + K
Sbjct: 399 CATERTLCCVLENYQKEDGIEVPEVLRKYIPG-----APEFLPYTKELPKDTTSSKAKAK 453
Query: 482 QKEG 485
+G
Sbjct: 454 ANKG 457
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEA 275
>gi|440291408|gb|ELP84677.1| seryl-tRNA synthetase, putative [Entamoeba invadens IP1]
Length = 451
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/235 (55%), Positives = 159/235 (67%), Gaps = 15/235 (6%)
Query: 8 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDT 67
VG D D KYLIATSEQP+ A+H WL +PIRY+G ST FR+E G+HG+DT
Sbjct: 224 VGTGKENVDPDDQKYLIATSEQPLTALHAGEWLLPKQMPIRYMGFSTNFRKEAGAHGKDT 283
Query: 68 RGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHA 127
GIFRVHQFEKVEQF +T P D+SW M +EMI+NS +FY L I YRVVNIVSGALN++
Sbjct: 284 WGIFRVHQFEKVEQFCMTMP--DKSWDMQEEMIKNSCDFYESLKIPYRVVNIVSGALNNS 341
Query: 128 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIY-----ATACAT 179
AAKK DLE +FPG +RELVSCSNC DYQSR L VR + K K+Y +T CAT
Sbjct: 342 AAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELDVRLQMDKKGKDKVYVHMLNSTLCAT 401
Query: 180 TRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
R +C +LE +QTE G+ IP+ LR F V +IPFV P+ +E KK+K
Sbjct: 402 ERALCCVLENYQTEDGIIIPEVLRPFCGGV-----EKIPFVAPKPVWTKEDKKKK 451
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +T P D+SW +EMI+NS +FY L I YRVVNIVSGALN
Sbjct: 282 DTWGIFRVHQFEKVEQFCMTMP--DKSWDMQEEMIKNSCDFYESLKIPYRVVNIVSGALN 339
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++AAKK DLE +FPG +RELVSCSNC YQSR L VR KK +K+ +VHMLN+T
Sbjct: 340 NSAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELDVRLQMDKKGKDKV-YVHMLNSTL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
CAT R +C +LE +QTE G+ IP+ LR F V +IPFV P+ +E KK+K
Sbjct: 399 CATERALCCVLENYQTEDGIIIPEVLRPFCGGV-----EKIPFVAPKPVWTKEDKKKK 451
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 34/55 (61%)
Query: 524 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
VG D D KYLIATSEQP+ A+H WL +PIRY+G ST FR+E A
Sbjct: 224 VGTGKENVDPDDQKYLIATSEQPLTALHAGEWLLPKQMPIRYMGFSTNFRKEAGA 278
>gi|300120408|emb|CBK19962.2| unnamed protein product [Blastocystis hominis]
Length = 449
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/231 (53%), Positives = 159/231 (68%), Gaps = 16/231 (6%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E +E ++KYLIATSEQPIC H WL E LP++Y G ST FR+E G+HG+DT GIFRV
Sbjct: 226 EGEEGEEKYLIATSEQPICGYHMGEWLDEKELPLKYTGFSTNFRKEAGAHGKDTWGIFRV 285
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQF+KVEQFV++ P +ESW M + MIQNS EFY L + YRVVNIVSGALN+AAAKK D
Sbjct: 286 HQFDKVEQFVISKP--EESWAMHEYMIQNSREFYESLNLPYRVVNIVSGALNNAAAKKYD 343
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LE WFPG A+RELVSCSNC DYQSR + +R G TK+K + +T CA TR +C
Sbjct: 344 LEGWFPGYEAYRELVSCSNCTDYQSRAMEIRCGATKKKNEEKKYVHMLNSTLCALTRTLC 403
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
ILE +QT GV IP+ L+ ++ + +PF + P + ++++K
Sbjct: 404 CILENYQTSEGVEIPEVLQPWMGGIKF-----LPFKRPLPPAMLKAREERK 449
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 127/179 (70%), Gaps = 7/179 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+KVEQFV++ P +ESW + MIQNS EFY L + YRVVNIVSGALN
Sbjct: 278 DTWGIFRVHQFDKVEQFVISKP--EESWAMHEYMIQNSREFYESLNLPYRVVNIVSGALN 335
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE WFPG A+RELVSCSNC YQSR + +R G TKK NE+ ++VHMLN+T
Sbjct: 336 NAAAKKYDLEGWFPGYEAYRELVSCSNCTDYQSRAMEIRCGATKKKNEEKKYVHMLNSTL 395
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
CA TR +C ILE +QT GV IP+ L+ ++ + +PF + P + ++++K
Sbjct: 396 CALTRTLCCILENYQTSEGVEIPEVLQPWMGGIKF-----LPFKRPLPPAMLKAREERK 449
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E +E ++KYLIATSEQPIC H WL E LP++Y G ST FR+E A
Sbjct: 226 EGEEGEEKYLIATSEQPICGYHMGEWLDEKELPLKYTGFSTNFRKEAGA 274
>gi|194701166|gb|ACF84667.1| unknown [Zea mays]
gi|195621762|gb|ACG32711.1| seryl-tRNA synthetase [Zea mays]
Length = 458
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 156/221 (70%), Gaps = 16/221 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DKYLIATSEQP+CA H + A LPI+Y G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 230 EDKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 289
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+ ++SW++ +EM++NSE+FY ++G+ Y+VV+IVSGALN AAAKK DLEAWF
Sbjct: 290 IEQFCITSPNGNDSWEIHEEMLKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYDLEAWF 349
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S FRELVSCSNC D+QSRRL + YGQ K + +T AT R +C ILE
Sbjct: 350 PASKTFRELVSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 409
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
Q E GV +P L+ ++ + +PF + P+D ++
Sbjct: 410 FQKEDGVEVPKALQPYMGGIEF-----LPFKQ--PLDAKQA 443
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 116/153 (75%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+ ++SW+ +EM++NSE+FY ++G+ Y+VV+IVSGALN
Sbjct: 277 DTAGIFRVHQFEKIEQFCITSPNGNDSWEIHEEMLKNSEDFYKEIGLPYQVVSIVSGALN 336
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S FRELVSCSNC +QSRRL + YGQ K + +FVHMLN+T
Sbjct: 337 DAAAKKYDLEAWFPASKTFRELVSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTL 396
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
AT R +C ILE Q E GV +P L+ ++ +
Sbjct: 397 TATERTLCCILENFQKEDGVEVPKALQPYMGGI 429
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+DKYLIATSEQP+CA H + A LPI+Y G STCFR+E
Sbjct: 230 EDKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEA 271
>gi|300120402|emb|CBK19956.2| unnamed protein product [Blastocystis hominis]
gi|300121988|emb|CBK22562.2| unnamed protein product [Blastocystis hominis]
gi|300122888|emb|CBK23895.2| unnamed protein product [Blastocystis hominis]
Length = 453
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 153/220 (69%), Gaps = 16/220 (7%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E +E ++KYLIATSEQPIC H WL E LP++Y G ST FR+E G+HG+DT GIFRV
Sbjct: 226 EGEEGEEKYLIATSEQPICGYHMGEWLDEKELPLKYTGFSTNFRKEAGAHGKDTWGIFRV 285
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQF+KVEQFV++ P +ESW M + MIQNS EFY L + YRVVNIVSGALN+AAAKK D
Sbjct: 286 HQFDKVEQFVISKP--EESWAMHEYMIQNSREFYESLNLPYRVVNIVSGALNNAAAKKYD 343
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LE WFPG A+RELVSCSNC DYQSR + +R G TK+K + +T CA TR +C
Sbjct: 344 LEGWFPGYEAYRELVSCSNCTDYQSRAMEIRCGATKKKNEEKKYVHMLNSTLCALTRTLC 403
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +QT GV IP+ L+ ++ + +PF + P
Sbjct: 404 CILENYQTSEGVEIPEVLQPWMGGIKF-----LPFKRPLP 438
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 121/168 (72%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+KVEQFV++ P +ESW + MIQNS EFY L + YRVVNIVSGALN
Sbjct: 278 DTWGIFRVHQFDKVEQFVISKP--EESWAMHEYMIQNSREFYESLNLPYRVVNIVSGALN 335
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE WFPG A+RELVSCSNC YQSR + +R G TKK NE+ ++VHMLN+T
Sbjct: 336 NAAAKKYDLEGWFPGYEAYRELVSCSNCTDYQSRAMEIRCGATKKKNEEKKYVHMLNSTL 395
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
CA TR +C ILE +QT GV IP+ L+ ++ + +PF + P
Sbjct: 396 CALTRTLCCILENYQTSEGVEIPEVLQPWMGGIKF-----LPFKRPLP 438
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E +E ++KYLIATSEQPIC H WL E LP++Y G ST FR+E A
Sbjct: 226 EGEEGEEKYLIATSEQPICGYHMGEWLDEKELPLKYTGFSTNFRKEAGA 274
>gi|429851452|gb|ELA26640.1| seryl-trna synthetase [Colletotrichum gloeosporioides Nara gc5]
Length = 456
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/231 (52%), Positives = 154/231 (66%), Gaps = 19/231 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+ A+H + W+ + LPI+Y G STCFR+E G HG++ G+FR+HQFEK
Sbjct: 232 EEKYLIATSEQPLSALHSEEWIQASQLPIKYAGYSTCFRKEAGKHGKEAWGLFRIHQFEK 291
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV P D SWK DEMI NSEEFY LG+ YRVV+IVSGALN+AAAKK DLEAWF
Sbjct: 292 IEQFVFCKPED--SWKHFDEMIANSEEFYKSLGLPYRVVSIVSGALNNAAAKKYDLEAWF 349
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------------IYATACATTRVICA 185
P ++ELVSCSNC DYQ+R L VRYG K K + AT CAT R +C
Sbjct: 350 PFQQEYKELVSCSNCTDYQTRELEVRYGVKKAKEAPGGGRKEYVHALNATLCATERTLCC 409
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
I+E +QT G +P+ LRK++P E +P+V P + QKK+
Sbjct: 410 IMENYQTPDGFEVPEVLRKYIPG----EPEFLPYVAELPKEITVVAGQKKK 456
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 122/182 (67%), Gaps = 12/182 (6%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
G+FR+HQFEK+EQFV P D SWK DEMI NSEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 282 GLFRIHQFEKIEQFVFCKPED--SWKHFDEMIANSEEFYKSLGLPYRVVSIVSGALNNAA 339
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-----KIEFVHMLNA 420
AKK DLEAWFP ++ELVSCSNC YQ+R L VRYG KK E + E+VH LNA
Sbjct: 340 AKKYDLEAWFPFQQEYKELVSCSNCTDYQTRELEVRYG-VKKAKEAPGGGRKEYVHALNA 398
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
T CAT R +C I+E +QT G +P+ LRK++P E +P+V P + QK
Sbjct: 399 TLCATERTLCCIMENYQTPDGFEVPEVLRKYIPG----EPEFLPYVAELPKEITVVAGQK 454
Query: 481 KQ 482
K+
Sbjct: 455 KK 456
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
++KYLIATSEQP+ A+H + W+ + LPI+Y G STCFR+E
Sbjct: 232 EEKYLIATSEQPLSALHSEEWIQASQLPIKYAGYSTCFRKEA 273
>gi|290560564|pdb|3LSQ|A Chain A, Trypanosoma Brucei Seryl-Trna Synthetase
gi|290560565|pdb|3LSQ|B Chain B, Trypanosoma Brucei Seryl-Trna Synthetase
gi|290560566|pdb|3LSS|A Chain A, Trypanosoma Brucei Seryl-Trna Synthetase In Complex With
Atp
gi|290560567|pdb|3LSS|B Chain B, Trypanosoma Brucei Seryl-Trna Synthetase In Complex With
Atp
Length = 484
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 143/205 (69%), Gaps = 12/205 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D KYLIATSE PI A HR W E P++Y G+STCFR+E G+HGRDT GIFRVHQF+K
Sbjct: 262 DKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDK 321
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +ESW+ L++MI SEEF LG+ YRVVNI SGALN+AAAKK DLEAWF
Sbjct: 322 IEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALNNAAAKKYDLEAWF 381
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA------------TACATTRVICAI 186
P SGAFRELVSCSNC DYQS+ + RYG + A T CA TR +C I
Sbjct: 382 PASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVKEYCHMLNGTLCAITRTMCCI 441
Query: 187 LETHQTETGVRIPDCLRKFVPAVYL 211
E +QTE GV IPD LR ++ + +
Sbjct: 442 CENYQTEEGVVIPDVLRPYMMGIEM 466
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 114/157 (72%), Gaps = 5/157 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+ SP +ESW+ L++MI SEEF LG+ YRVVNI SGALN
Sbjct: 309 DTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALN 368
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG----QTKKMNEKIEFVHML 418
+AAAKK DLEAWFP SGAFRELVSCSNC YQS+ + RYG T N K E+ HML
Sbjct: 369 NAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVK-EYCHML 427
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
N T CA TR +C I E +QTE GV IPD LR ++ +
Sbjct: 428 NGTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGI 464
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 30/44 (68%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D KYLIATSE PI A HR W E P++Y G+STCFR+E A
Sbjct: 262 DKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGA 305
>gi|71755749|ref|XP_828789.1| seryl-tRNA synthetase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834175|gb|EAN79677.1| seryl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261334698|emb|CBH17692.1| seryl-tRNA synthetase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 479
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 143/205 (69%), Gaps = 12/205 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D KYLIATSE PI A HR W E P++Y G+STCFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 DKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +ESW+ L++MI SEEF LG+ YRVVNI SGALN+AAAKK DLEAWF
Sbjct: 317 IEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALNNAAAKKYDLEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA------------TACATTRVICAI 186
P SGAFRELVSCSNC DYQS+ + RYG + A T CA TR +C I
Sbjct: 377 PASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVKEYCHMLNGTLCAITRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAVYL 211
E +QTE GV IPD LR ++ + +
Sbjct: 437 CENYQTEEGVVIPDVLRPYMMGIEM 461
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 114/157 (72%), Gaps = 5/157 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+ SP +ESW+ L++MI SEEF LG+ YRVVNI SGALN
Sbjct: 304 DTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG----QTKKMNEKIEFVHML 418
+AAAKK DLEAWFP SGAFRELVSCSNC YQS+ + RYG T N K E+ HML
Sbjct: 364 NAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVK-EYCHML 422
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
N T CA TR +C I E +QTE GV IPD LR ++ +
Sbjct: 423 NGTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGI 459
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 30/44 (68%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D KYLIATSE PI A HR W E P++Y G+STCFR+E A
Sbjct: 257 DKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGA 300
>gi|295657633|ref|XP_002789383.1| seryl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283867|gb|EEH39433.1| seryl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 488
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 150/211 (71%), Gaps = 19/211 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ ++YLIATSEQP+ A+H WL + LPI+Y G STC+R+E GSHG++ GIFRVH
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLHDTDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVH 295
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA++K DL
Sbjct: 296 QFEKIEQFVITKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDL 353
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK------------QKIY-----ATAC 177
EAWFP G ++ELVSCSNC DYQSR L +RY K +K Y AT C
Sbjct: 354 EAWFPSQGTYKELVSCSNCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHALNATLC 413
Query: 178 ATTRVICAILETHQTETGVRIPDCLRKFVPA 208
AT R +C +LE +QTETG+ +P+ LRK++P
Sbjct: 414 ATERTLCCLLENYQTETGIIVPEVLRKYIPG 444
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 113/157 (71%), Gaps = 10/157 (6%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GIFRVHQFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 290 GIFRVHQFEKIEQFVITKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAA 347
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE--------KIEFVHM 417
++K DLEAWFP G ++ELVSCSNC YQSR L +RY K + K +VH
Sbjct: 348 SRKNDLEAWFPSQGTYKELVSCSNCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHA 407
Query: 418 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPA 454
LNAT CAT R +C +LE +QTETG+ +P+ LRK++P
Sbjct: 408 LNATLCATERTLCCLLENYQTETGIIVPEVLRKYIPG 444
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ ++YLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLHDTDLPIKYAGYSTCYRKEA 281
>gi|225685085|gb|EEH23369.1| seryl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
Length = 478
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 150/211 (71%), Gaps = 19/211 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ ++YLIATSEQP+ A+H WL + LPI+Y G STC+R+E GSHG++ GIFRVH
Sbjct: 226 EDKASERYLIATSEQPLSALHSGEWLHDTDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVH 285
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA++K DL
Sbjct: 286 QFEKIEQFVITKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDL 343
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK------------QKIY-----ATAC 177
EAWFP G ++ELVSCSNC DYQSR L +RY K +K Y AT C
Sbjct: 344 EAWFPSQGTYKELVSCSNCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHALNATLC 403
Query: 178 ATTRVICAILETHQTETGVRIPDCLRKFVPA 208
AT R +C +LE +QTETG+ +P+ LRK++P
Sbjct: 404 ATERTLCCLLENYQTETGIIVPEVLRKYIPG 434
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 113/157 (71%), Gaps = 10/157 (6%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GIFRVHQFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 280 GIFRVHQFEKIEQFVITKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAA 337
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE--------KIEFVHM 417
++K DLEAWFP G ++ELVSCSNC YQSR L +RY K + K +VH
Sbjct: 338 SRKNDLEAWFPSQGTYKELVSCSNCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHA 397
Query: 418 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPA 454
LNAT CAT R +C +LE +QTETG+ +P+ LRK++P
Sbjct: 398 LNATLCATERTLCCLLENYQTETGIIVPEVLRKYIPG 434
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ ++YLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 226 EDKASERYLIATSEQPLSALHSGEWLHDTDLPIKYAGYSTCYRKEA 271
>gi|50555007|ref|XP_504912.1| YALI0F02629p [Yarrowia lipolytica]
gi|49650782|emb|CAG77717.1| YALI0F02629p [Yarrowia lipolytica CLIB122]
Length = 453
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 156/238 (65%), Gaps = 23/238 (9%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H + W PE LP RY G STCFR+E GSHG+D GIFRV
Sbjct: 228 DGQDEKYLIATSEQPISAYHANEWFERPEEQLPRRYAGYSTCFRREAGSHGKDAWGIFRV 287
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEK+EQF +T P ++SW+ D MI SEEFY LG+ YRVV+IVSG LN+AAAKK D
Sbjct: 288 HQFEKIEQFCITDP--EKSWEEFDRMIDASEEFYKSLGLPYRVVSIVSGELNNAAAKKYD 345
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G KQ + +T CAT R +C
Sbjct: 346 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKKQNEREKKYVHCLNSTLCATERALC 405
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKK 242
ILE +QT+ G+R+P+ LR+F+P GE F+ P E K QK+ KK
Sbjct: 406 CILENYQTDDGLRVPEVLRRFIP-------GEPEFI---PYTAELPKNSTSQKQAAKK 453
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 124/186 (66%), Gaps = 12/186 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF +T P ++SW+ D MI SEEFY LG+ YRVV+IVSG LN
Sbjct: 280 DAWGIFRVHQFEKIEQFCITDP--EKSWEEFDRMIDASEEFYKSLGLPYRVVSIVSGELN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K+ + ++VH LN+T
Sbjct: 338 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKKQNEREKKYVHCLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +QT+ G+R+P+ LR+F+P GE F+ P E K Q
Sbjct: 398 CATERALCCILENYQTDDGLRVPEVLRRFIP-------GEPEFI---PYTAELPKNSTSQ 447
Query: 483 KEGMKK 488
K+ KK
Sbjct: 448 KQAAKK 453
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
D D+KYLIATSEQPI A H + W PE LP RY G STCFR+E
Sbjct: 228 DGQDEKYLIATSEQPISAYHANEWFERPEEQLPRRYAGYSTCFRREA 274
>gi|50426035|ref|XP_461614.1| DEHA2G01694p [Debaryomyces hansenii CBS767]
gi|49657284|emb|CAG90061.1| DEHA2G01694p [Debaryomyces hansenii CBS767]
Length = 460
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/228 (56%), Positives = 155/228 (67%), Gaps = 17/228 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E GSHG+D GIFRVH F
Sbjct: 239 DEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFVLTEP--EKSWEEFDRMIGLSEEFYKSLGLPYRVVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R +C IL
Sbjct: 357 WFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALCCIL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
E +QTE G+ IP+ LR+++P E IPFVK P + KK KK
Sbjct: 417 ENYQTEDGLVIPEVLRRYIPG----EPEFIPFVKELPKNSTSNKKNKK 460
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 121/179 (67%), Gaps = 6/179 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGLSEEFYKSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
AT R +C ILE +QTE G+ IP+ LR+++P E IPFVK P + KK KK
Sbjct: 406 SATQRALCCILENYQTEDGLVIPEVLRRYIPG----EPEFIPFVKELPKNSTSNKKNKK 460
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E
Sbjct: 239 DEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREA 282
>gi|226294398|gb|EEH49818.1| seryl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
Length = 488
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 150/211 (71%), Gaps = 19/211 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ ++YLIATSEQP+ A+H WL + LPI+Y G STC+R+E GSHG++ GIFRVH
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLHDTDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVH 295
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA++K DL
Sbjct: 296 QFEKIEQFVITKPED--SWDSFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDL 353
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK------------QKIY-----ATAC 177
EAWFP G ++ELVSCSNC DYQSR L +RY K +K Y AT C
Sbjct: 354 EAWFPSQGTYKELVSCSNCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHALNATLC 413
Query: 178 ATTRVICAILETHQTETGVRIPDCLRKFVPA 208
AT R +C +LE +QTETG+ +P+ LRK++P
Sbjct: 414 ATERTLCCLLENYQTETGIIVPEVLRKYIPG 444
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 114/157 (72%), Gaps = 10/157 (6%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GIFRVHQFEK+EQFV+T P D SW + +M++NSEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 290 GIFRVHQFEKIEQFVITKPED--SWDSFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAA 347
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE--------KIEFVHM 417
++K DLEAWFP G ++ELVSCSNC YQSR L +RY K + K +VH
Sbjct: 348 SRKNDLEAWFPSQGTYKELVSCSNCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHA 407
Query: 418 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPA 454
LNAT CAT R +C +LE +QTETG+ +P+ LRK++P
Sbjct: 408 LNATLCATERTLCCLLENYQTETGIIVPEVLRKYIPG 444
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ ++YLIATSEQP+ A+H WL + LPI+Y G STC+R+E
Sbjct: 236 EDKASERYLIATSEQPLSALHSGEWLHDTDLPIKYAGYSTCYRKEA 281
>gi|342185850|emb|CCC95335.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 473
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 142/203 (69%), Gaps = 12/203 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D KYLIATSE P+ A HR W E PI+Y G+S+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 DSKYLIATSEMPMVAYHRGKWFTELKEPIKYAGMSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP D ESW++L++MI SE+F LG+ YRV+NI SGALN+AAAKK DLEAWF
Sbjct: 317 IEQFVVCSPRDGESWRVLEDMISTSEDFSKSLGLPYRVINICSGALNNAAAKKYDLEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------------IYATACATTRVICAI 186
P SGAFRELVSCSNC DYQ+ + RYG + + T CA TR +C I
Sbjct: 377 PASGAFRELVSCSNCTDYQAHSINCRYGPNLRGTVSQNVKEYCHMLNGTLCAVTRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAV 209
E +QTE GV IPD LR ++ V
Sbjct: 437 CENYQTEEGVVIPDVLRPYMMGV 459
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 113/157 (71%), Gaps = 5/157 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQFV+ SP D ESW+ L++MI SE+F LG+ YRV+NI SGALN
Sbjct: 304 DTLGIFRVHQFDKIEQFVVCSPRDGESWRVLEDMISTSEDFSKSLGLPYRVINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG----QTKKMNEKIEFVHML 418
+AAAKK DLEAWFP SGAFRELVSCSNC YQ+ + RYG T N K E+ HML
Sbjct: 364 NAAAKKYDLEAWFPASGAFRELVSCSNCTDYQAHSINCRYGPNLRGTVSQNVK-EYCHML 422
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
N T CA TR +C I E +QTE GV IPD LR ++ V
Sbjct: 423 NGTLCAVTRTMCCICENYQTEEGVVIPDVLRPYMMGV 459
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 12/72 (16%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY---- 584
D KYLIATSE P+ A HR W E PI+Y G+S+CFR+E A G+ R +
Sbjct: 257 DSKYLIATSEMPMVAYHRGKWFTELKEPIKYAGMSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 585 --FHVTCAQREG 594
V C+ R+G
Sbjct: 317 IEQFVVCSPRDG 328
>gi|156844517|ref|XP_001645321.1| hypothetical protein Kpol_1037p60 [Vanderwaltozyma polyspora DSM
70294]
gi|156115981|gb|EDO17463.1| hypothetical protein Kpol_1037p60 [Vanderwaltozyma polyspora DSM
70294]
Length = 458
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 155/226 (68%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H + W P+ LPIRY+G STCFR+E GSHG+D GIFRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYVGYSTCFRREAGSHGKDAWGIFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ D+MI +SEEFY L + YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFVLTEP--EKSWEEFDKMINHSEEFYKSLKLPYRVVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C IL
Sbjct: 357 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLSATQRALCCIL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QTE G+ IP+ LRK++P E IPFVK P + KK+
Sbjct: 417 ENYQTEDGLIIPEVLRKYMPG----EPEFIPFVKELPKNSTSNKKK 458
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 121/177 (68%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D+MI +SEEFY L + YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDKMINHSEEFYKSLKLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C ILE +QTE G+ IP+ LRK++P E IPFVK P + KK+
Sbjct: 406 SATQRALCCILENYQTEDGLIIPEVLRKYMPG----EPEFIPFVKELPKNSTSNKKK 458
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRTYFH 586
D+KYLIATSEQPI A H + W P+ LPIRY+G STCFR+E + G+ R +
Sbjct: 239 DEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYVGYSTCFRREAGSHGKDAWGIFRVHAF 298
Query: 587 VTCAQREGLLSEATSEEVDQ----ADPFYAHCRL 616
Q E + EE D+ ++ FY +L
Sbjct: 299 EKIEQFVLTEPEKSWEEFDKMINHSEEFYKSLKL 332
>gi|448079227|ref|XP_004194346.1| Piso0_004834 [Millerozyma farinosa CBS 7064]
gi|359375768|emb|CCE86350.1| Piso0_004834 [Millerozyma farinosa CBS 7064]
Length = 460
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 156/231 (67%), Gaps = 17/231 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KY+IATSEQPI A H W P+ LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYMIATSEQPISAYHSGEWFESPQEQLPVRYAGFSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI +EEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGVAEEFYKSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R +C
Sbjct: 354 LEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
ILE +Q E G+ IP+ LRK++P E IPF+K P + TKK KK
Sbjct: 414 CILENYQKEDGLVIPEVLRKYIPG----EPSFIPFIKDLPKNSTSTKKTKK 460
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 121/179 (67%), Gaps = 6/179 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI +EEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGVAEEFYKSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
AT R +C ILE +Q E G+ IP+ LRK++P E IPF+K P + TKK KK
Sbjct: 406 SATQRALCCILENYQKEDGLVIPEVLRKYIPG----EPSFIPFIKDLPKNSTSTKKTKK 460
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRT 583
D D+KY+IATSEQPI A H W P+ LP+RY G S+CFR+E + G+ R
Sbjct: 236 DGEDEKYMIATSEQPISAYHSGEWFESPQEQLPVRYAGFSSCFRREAGSHGKDAWGIFRV 295
Query: 584 YFHVTCAQREGLLSEATSEEVDQ----ADPFYAHCRL 616
+ Q E + EE D+ A+ FY L
Sbjct: 296 HAFEKIEQFVLTEPEKSWEEFDRMIGVAEEFYKSLGL 332
>gi|326480121|gb|EGE04131.1| seryl-tRNA synthetase [Trichophyton equinum CBS 127.97]
Length = 435
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 146/203 (71%), Gaps = 11/203 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E G+HG+D GIFRVH
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVH 289
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN+AA+KKLDL
Sbjct: 290 QFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDL 347
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQ+R L +R+G K + AT CAT R +C
Sbjct: 348 EAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCC 407
Query: 186 ILETHQTETGVRIPDCLRKFVPA 208
ILE +Q E G+ +P+ LRK++P
Sbjct: 408 ILENYQQEDGIVVPEVLRKYIPG 430
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 112/152 (73%), Gaps = 2/152 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN
Sbjct: 281 DAWGIFRVHQFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KKLDLEAWFP G ++ELVSCSNC YQ+R L +R+G K + K + H LNAT
Sbjct: 339 NAASKKLDLEAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPA 454
CAT R +C ILE +Q E G+ +P+ LRK++P
Sbjct: 399 CATERALCCILENYQQEDGIVVPEVLRKYIPG 430
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E A
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGA 277
>gi|254566971|ref|XP_002490596.1| Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase
[Komagataella pastoris GS115]
gi|238030392|emb|CAY68315.1| Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase
[Komagataella pastoris GS115]
gi|328350984|emb|CCA37384.1| seryl-tRNA synthetase [Komagataella pastoris CBS 7435]
Length = 460
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/226 (55%), Positives = 153/226 (67%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H + W P+ LPIRY G S+CFR+E GSHG+D GIFRVH F
Sbjct: 241 DEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGFSSCFRREAGSHGKDAWGIFRVHAF 300
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF LT P D+SW+ D MI +E FY LG+ YRVV IVSG LN+AAAKK DLEA
Sbjct: 301 EKIEQFCLTEP--DKSWEEFDRMIGAAEGFYQSLGLPYRVVGIVSGELNNAAAKKYDLEA 358
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVICAIL 187
WFP F+ELVSCSNC DYQSR L +R G K+K Y +T CAT R +C +L
Sbjct: 359 WFPFQKEFKELVSCSNCTDYQSRNLEIRCGIKSVTQKEKKYVHCLNSTLCATERALCCVL 418
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QTE G+++P+ LRK++P E IPFVK P + KK+
Sbjct: 419 ENYQTEDGLKVPEVLRKYIPG----EPEFIPFVKELPKNSTSQKKK 460
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 119/177 (67%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQF LT P D+SW+ D MI +E FY LG+ YRVV IVSG LN
Sbjct: 290 DAWGIFRVHAFEKIEQFCLTEP--DKSWEEFDRMIGAAEGFYQSLGLPYRVVGIVSGELN 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP F+ELVSCSNC YQSR L +R G ++ ++VH LN+T
Sbjct: 348 NAAAKKYDLEAWFPFQKEFKELVSCSNCTDYQSRNLEIRCGIKSVTQKEKKYVHCLNSTL 407
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C +LE +QTE G+++P+ LRK++P E IPFVK P + KK+
Sbjct: 408 CATERALCCVLENYQTEDGLKVPEVLRKYIPG----EPEFIPFVKELPKNSTSQKKK 460
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H + W P+ LPIRY G S+CFR+E +
Sbjct: 241 DEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGFSSCFRREAGS 286
>gi|50303053|ref|XP_451464.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640595|emb|CAH03052.1| KLLA0A10593p [Kluyveromyces lactis]
Length = 459
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 156/226 (69%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P+ LP+RY+G S+CFR+E GSHG+D G+FRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ D+MI SEEFY LG+ YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFVLTEP--EKSWEEFDKMINYSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K +K Y +T CAT R +C +L
Sbjct: 357 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALCCVL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QT+ G+++P+ LRK++P E +P+VK P + KK+
Sbjct: 417 ENYQTDEGLKVPEVLRKYIPG----EPEFLPYVKELPKNSTSNKKK 458
Score = 192 bits (489), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 123/177 (69%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFVLT P ++SW+ D+MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVLTEP--EKSWEEFDKMINYSEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C +LE +QT+ G+++P+ LRK++P E +P+VK P + KK+
Sbjct: 406 CATQRALCCVLENYQTDEGLKVPEVLRKYIPG----EPEFLPYVKELPKNSTSNKKK 458
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H W P+ LP+RY+G S+CFR+E +
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGS 284
>gi|344233176|gb|EGV65049.1| serine-tRNA ligase [Candida tenuis ATCC 10573]
gi|344233177|gb|EGV65050.1| hypothetical protein CANTEDRAFT_113376 [Candida tenuis ATCC 10573]
Length = 461
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 160/238 (67%), Gaps = 20/238 (8%)
Query: 7 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHG 64
KV D E+DE KYLIATSEQPI A H + W P+ LP+RY G S+CFR+E GSHG
Sbjct: 233 KVSDGPREEDE---KYLIATSEQPISAYHANEWFESPQEQLPVRYAGFSSCFRREAGSHG 289
Query: 65 RDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGAL 124
+D GIFRVHQFEKVEQFVL P ++SW+ D MI+ SEEFY L + YRVV IVSG L
Sbjct: 290 KDAWGIFRVHQFEKVEQFVLAEP--EKSWEEFDRMIRLSEEFYQSLKLPYRVVGIVSGEL 347
Query: 125 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYAT 175
N+AAAKK DLEAWFP ++ELVSCSNC DYQSR L +R G QT++K + +T
Sbjct: 348 NNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNST 407
Query: 176 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
AT R +C ILE +QTE G+ +P+ LRK++P E +PFVK P + KK+
Sbjct: 408 LTATERALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 461
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 120/177 (67%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQFVL P ++SW+ D MI+ SEEFY L + YRVV IVSG LN
Sbjct: 291 DAWGIFRVHQFEKVEQFVLAEP--EKSWEEFDRMIRLSEEFYQSLKLPYRVVGIVSGELN 348
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 349 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 408
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C ILE +QTE G+ +P+ LRK++P E +PFVK P + KK+
Sbjct: 409 TATERALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 461
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 523 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA-- 578
KV D E+DE KYLIATSEQPI A H + W P+ LP+RY G S+CFR+E +
Sbjct: 233 KVSDGPREEDE---KYLIATSEQPISAYHANEWFESPQEQLPVRYAGFSSCFRREAGSHG 289
Query: 579 ----GMCRTYFHVTCAQREGLLSEATSEEVDQ----ADPFYAHCRL 616
G+ R + Q E + EE D+ ++ FY +L
Sbjct: 290 KDAWGIFRVHQFEKVEQFVLAEPEKSWEEFDRMIRLSEEFYQSLKL 335
>gi|126136162|ref|XP_001384605.1| Seryl-tRNA synthetase, cytoplasmic (Serine--tRNA ligase) (SerRS)
[Scheffersomyces stipitis CBS 6054]
gi|126091803|gb|ABN66576.1| Seryl-tRNA synthetase, cytoplasmic (Serine--tRNA ligase) (SerRS)
[Scheffersomyces stipitis CBS 6054]
Length = 460
Score = 247 bits (631), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 156/232 (67%), Gaps = 17/232 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 235 DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSHGKDAWGIFRV 294
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 295 HAFEKIEQFVLTEP--EKSWQEFDRMIGLSEEFYKSLGLPYRVVGIVSGELNNAAAKKYD 352
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R +C
Sbjct: 353 LEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALC 412
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
ILE +Q E G+ IP+ LRK++P E IPFVK P + TKK K+
Sbjct: 413 CILENYQKEDGLVIPEVLRKYIPG----EPEFIPFVKELPKNSTSTKKAAKK 460
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 121/180 (67%), Gaps = 6/180 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 287 DAWGIFRVHAFEKIEQFVLTEP--EKSWQEFDRMIGLSEEFYKSLGLPYRVVGIVSGELN 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 345 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 404
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
AT R +C ILE +Q E G+ IP+ LRK++P E IPFVK P + TKK K+
Sbjct: 405 SATQRALCCILENYQKEDGLVIPEVLRKYIPG----EPEFIPFVKELPKNSTSTKKAAKK 460
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E +
Sbjct: 235 DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGS 283
>gi|169612613|ref|XP_001799724.1| hypothetical protein SNOG_09430 [Phaeosphaeria nodorum SN15]
gi|111062502|gb|EAT83622.1| hypothetical protein SNOG_09430 [Phaeosphaeria nodorum SN15]
Length = 461
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 158/230 (68%), Gaps = 19/230 (8%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A+H + WL A LPI+Y G ST FR+E GSHG+D GIFR+HQFEKV
Sbjct: 237 DKYLIATSEQPISALHSEEWLGTADLPIKYAGYSTNFRKEAGSHGKDAWGIFRIHQFEKV 296
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF+LT+P ++SW+ D+M+ SEEFY LG+ Y+VV IVSGALN+AAA K DLEAWFP
Sbjct: 297 EQFLLTTP--EKSWEAFDDMLATSEEFYQSLGLPYQVVAIVSGALNNAAAMKRDLEAWFP 354
Query: 140 --GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILE 188
G G ++ELVS SNC DYQ+R L +R+G KQ + T CAT R +C +LE
Sbjct: 355 VTGGGEYKELVSISNCTDYQTRELEIRFGVKKQTATRKDYVHALNGTLCATERTLCCVLE 414
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK--TAPIDEEETKKQKKQ 236
+QT G +P+ LRK++P + +PFVK P DE++ ++ KQ
Sbjct: 415 NYQTPEGFNVPEVLRKYIPG----QPAFLPFVKEWKQPTDEKKIPERPKQ 460
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 127/184 (69%), Gaps = 10/184 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFR+HQFEKVEQF+LT+P ++SW+ D+M+ SEEFY LG+ Y+VV IVSGALN
Sbjct: 283 DAWGIFRIHQFEKVEQFLLTTP--EKSWEAFDDMLATSEEFYQSLGLPYQVVAIVSGALN 340
Query: 363 HAAAKKLDLEAWFP--GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
+AAA K DLEAWFP G G ++ELVS SNC YQ+R L +R+G K+ + ++VH LN
Sbjct: 341 NAAAMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRFGVKKQTATRKDYVHALNG 400
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK--TAPIDEEETKK 478
T CAT R +C +LE +QT G +P+ LRK++P + +PFVK P DE++ +
Sbjct: 401 TLCATERTLCCVLENYQTPEGFNVPEVLRKYIPG----QPAFLPFVKEWKQPTDEKKIPE 456
Query: 479 QKKQ 482
+ KQ
Sbjct: 457 RPKQ 460
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A+H + WL A LPI+Y G ST FR+E +
Sbjct: 237 DKYLIATSEQPISALHSEEWLGTADLPIKYAGYSTNFRKEAGS 279
>gi|448083806|ref|XP_004195447.1| Piso0_004834 [Millerozyma farinosa CBS 7064]
gi|359376869|emb|CCE85252.1| Piso0_004834 [Millerozyma farinosa CBS 7064]
Length = 460
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 156/231 (67%), Gaps = 17/231 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KY+IATSEQPI A H W P+ LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYMIATSEQPISAYHSGEWFESPQEQLPVRYAGFSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI +EEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGAAEEFYKSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R +C
Sbjct: 354 LEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
ILE +Q + G+ IP+ LRK++P E IPF+K P + TKK KK
Sbjct: 414 CILENYQKDDGLVIPEVLRKYIPG----EPSFIPFLKDLPKNSTSTKKNKK 460
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 121/179 (67%), Gaps = 6/179 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI +EEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGAAEEFYKSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
AT R +C ILE +Q + G+ IP+ LRK++P E IPF+K P + TKK KK
Sbjct: 406 SATQRALCCILENYQKDDGLVIPEVLRKYIPG----EPSFIPFLKDLPKNSTSTKKNKK 460
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRT 583
D D+KY+IATSEQPI A H W P+ LP+RY G S+CFR+E + G+ R
Sbjct: 236 DGEDEKYMIATSEQPISAYHSGEWFESPQEQLPVRYAGFSSCFRREAGSHGKDAWGIFRV 295
Query: 584 YFHVTCAQREGLLSEATSEEVDQ----ADPFYAHCRL 616
+ Q E + EE D+ A+ FY L
Sbjct: 296 HAFEKIEQFVLTEPEKSWEEFDRMIGAAEEFYKSLGL 332
>gi|403412364|emb|CCL99064.1| predicted protein [Fibroporia radiculosa]
Length = 452
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 149/217 (68%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H D W PE LPI+Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 235 DEKYLIATSEQPISAFHSDEWFDSPETQLPIKYAGYSTCFRKEAGSAGRDMWGIFRVHQF 294
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF LT P ++SW+M D M+ NSE FY LGI YRVV IVSGALN AAA+K DLEA
Sbjct: 295 EKIEQFCLTEP--EKSWEMFDTMVANSEAFYQSLGIPYRVVAIVSGALNLAAAQKYDLEA 352
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAIL 187
WFP GA++ELVSCSNC DYQSRRL VR GQ + KIY T CAT R +C ++
Sbjct: 353 WFPFQGAYKELVSCSNCTDYQSRRLEVRCGQKTKDQTRKIYVHMLNGTLCATERALCCLV 412
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+ +P+ LR Y+ +P+VK P
Sbjct: 413 ENYQTPDGLVVPEVLRP-----YMQGRDFLPWVKELP 444
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 116/171 (67%), Gaps = 7/171 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEK+EQF LT P ++SW+ D M+ NSE FY LGI YRVV IVSG
Sbjct: 281 AGRDMWGIFRVHQFEKIEQFCLTEP--EKSWEMFDTMVANSEAFYQSLGIPYRVVAIVSG 338
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAA+K DLEAWFP GA++ELVSCSNC YQSRRL VR GQ K + +VHMLN
Sbjct: 339 ALNLAAAQKYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGQKTKDQTRKIYVHMLN 398
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
T CAT R +C ++E +QT G+ +P+ LR Y+ +P+VK P
Sbjct: 399 GTLCATERALCCLVENYQTPDGLVVPEVLRP-----YMQGRDFLPWVKELP 444
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI A H D W PE LPI+Y G STCFR+E +
Sbjct: 235 DEKYLIATSEQPISAFHSDEWFDSPETQLPIKYAGYSTCFRKEAGSA 281
>gi|320583800|gb|EFW98013.1| Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase
[Ogataea parapolymorpha DL-1]
Length = 464
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/227 (55%), Positives = 151/227 (66%), Gaps = 17/227 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H + W P LPIRY G S+CFR+E GSHG+D GIFRVH F
Sbjct: 241 DEKYLIATSEQPISAYHSNEWFESPAEQLPIRYAGYSSCFRREAGSHGKDAWGIFRVHAF 300
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF ++ P ++SW D MIQNSEEFY LG+ YRVV+IVSG LN+AAAKK DLEA
Sbjct: 301 EKVEQFCISEP--EKSWDEFDRMIQNSEEFYQSLGLPYRVVSIVSGELNNAAAKKYDLEA 358
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIYA-----TACATTRVICAIL 187
WFP F+ELVSCSNC DYQSR L +R G K+K Y T CAT R +C +L
Sbjct: 359 WFPFQQEFKELVSCSNCTDYQSRNLEIRCGIKAMNQKEKKYVHCLNCTLCATERALCCVL 418
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +QT+ G+ +P LRK++P E IPFV P + K+ K
Sbjct: 419 ENYQTDDGLVVPKVLRKYIPG----EPEFIPFVNELPKNSTSAKRGK 461
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 121/179 (67%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEKVEQF ++ P ++SW D MIQNSEEFY LG+ YRVV+IVSG LN
Sbjct: 290 DAWGIFRVHAFEKVEQFCISEP--EKSWDEFDRMIQNSEEFYQSLGLPYRVVSIVSGELN 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK-IEFVHMLNAT 421
+AAAKK DLEAWFP F+ELVSCSNC YQSR L +R G K MN+K ++VH LN T
Sbjct: 348 NAAAKKYDLEAWFPFQQEFKELVSCSNCTDYQSRNLEIRCG-IKAMNQKEKKYVHCLNCT 406
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
CAT R +C +LE +QT+ G+ +P LRK++P E IPFV P + K+ K
Sbjct: 407 LCATERALCCVLENYQTDDGLVVPKVLRKYIPG----EPEFIPFVNELPKNSTSAKRGK 461
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H + W P LPIRY G S+CFR+E +
Sbjct: 241 DEKYLIATSEQPISAYHSNEWFESPAEQLPIRYAGYSSCFRREAGS 286
>gi|149245668|ref|XP_001527311.1| seryl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
gi|146449705|gb|EDK43961.1| seryl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
Length = 461
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 129/230 (56%), Positives = 154/230 (66%), Gaps = 17/230 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPIRY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPIRYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P D+SW+ D MI SE+FY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--DKSWEEFDRMIGASEDFYQSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R IC
Sbjct: 354 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATERTIC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
ILE +Q E G+ IP+ LRK++P E +PFVK P + KK K
Sbjct: 414 CILENYQKEDGLVIPEVLRKYIPG----EPEFVPFVKELPKNSTSQKKAK 459
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 119/178 (66%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P D+SW+ D MI SE+FY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--DKSWEEFDRMIGASEDFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E G+ IP+ LRK++P E +PFVK P + KK K
Sbjct: 406 SATERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFVPFVKELPKNSTSQKKAK 459
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
D D+KYLIATSEQPI A H W P+ LPIRY G S+CFR+E
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPIRYAGYSSCFRREA 282
>gi|165940924|gb|ABY75307.1| seryl-tRNA synthetase [Ovis aries]
Length = 245
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/156 (72%), Positives = 130/156 (83%), Gaps = 4/156 (2%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 94 VIGKGSERSDD----NSFEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 149
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 150 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 209
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDY 156
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DY
Sbjct: 210 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDY 245
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 80/91 (87%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 155 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 214
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAY 393
HAA+KKLDLEAWFPGSGAFRELVSCSNC Y
Sbjct: 215 HAASKKLDLEAWFPGSGAFRELVSCSNCTDY 245
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI
Sbjct: 81 VAQLSQFDEELYKVIGKGSERSDD----NSFEEKYLIATSEQPIAALHRDEWLRPEDLPI 136
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFRQE +
Sbjct: 137 KYAGLSTCFRQEVGS 151
>gi|367037535|ref|XP_003649148.1| hypothetical protein THITE_2141035 [Thielavia terrestris NRRL 8126]
gi|346996409|gb|AEO62812.1| hypothetical protein THITE_2141035 [Thielavia terrestris NRRL 8126]
Length = 444
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 149/214 (69%), Gaps = 20/214 (9%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A H + WL LP++Y G STCFR+E G+HG+D GIFRVH+F KV
Sbjct: 232 DKYLIATSEQPISAYHSEEWLQPKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKV 291
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M + MI SEEFY LGI YRVV IVSGAL AKKLDLEAWFP
Sbjct: 292 EQFCITDP--EKSWEMFENMIATSEEFYKSLGIPYRVVAIVSGAL---TAKKLDLEAWFP 346
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAILETH 190
G F+ELVSCSNC DYQSR L +R+G KQ K Y +T CATTR ICAILE
Sbjct: 347 HQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLCATTRTICAILENF 406
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTA 223
QTE GV IP+ LRK++P A E +PF K A
Sbjct: 407 QTEDGVNIPEPLRKYLPG-----APEFLPFAKPA 435
Score = 189 bits (480), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 124/191 (64%), Gaps = 26/191 (13%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH+F KVEQF +T P ++SW+ + MI SEEFY LGI YRVV IVSGAL
Sbjct: 278 DVWGIFRVHEFTKVEQFCITDP--EKSWEMFENMIATSEEFYKSLGIPYRVVAIVSGAL- 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AKKLDLEAWFP G F+ELVSCSNC YQSR L +R+G K+ + K +VH LN+T
Sbjct: 335 --TAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTL 392
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKK 481
CATTR ICAILE QTE GV IP+ LRK++P A E +PF K A
Sbjct: 393 CATTRTICAILENFQTEDGVNIPEPLRKYLPG-----APEFLPFAKPA------------ 435
Query: 482 QKEGMKKKVLI 492
G KK+VLI
Sbjct: 436 ---GEKKEVLI 443
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A H + WL LP++Y G STCFR+E A
Sbjct: 232 DKYLIATSEQPISAYHSEEWLQPKDLPLKYAGYSTCFRKEAGA 274
>gi|67469401|ref|XP_650679.1| seryl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
gi|56467329|gb|EAL45293.1| seryl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449708456|gb|EMD47912.1| seryl-tRNA synthetase, putative [Entamoeba histolytica KU27]
Length = 453
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 160/230 (69%), Gaps = 18/230 (7%)
Query: 17 ELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
ELDD KYLIATSEQP+ A+H W+ LPIRY+G ST FR+E G+HG+DT GIFRVHQ
Sbjct: 231 ELDDQKYLIATSEQPLTALHAGEWILPKQLPIRYMGFSTNFRKEAGAHGKDTWGIFRVHQ 290
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQF +T P D+SW+M +EMI+NS +F+ L I YRVVNIVSGALN+AAAKK DLE
Sbjct: 291 FEKIEQFCMTLP--DKSWEMHEEMIKNSRDFFESLKIPYRVVNIVSGALNNAAAKKYDLE 348
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
+FPG +RELVSCSNC DYQSR L VR QT +K + +T CAT R +C I
Sbjct: 349 GYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTLCATERALCCI 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
LE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 408 LENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 452
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P D+SW+ +EMI+NS +F+ L I YRVVNIVSGALN
Sbjct: 281 DTWGIFRVHQFEKIEQFCMTLP--DKSWEMHEEMIKNSRDFFESLKIPYRVVNIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE +FPG +RELVSCSNC YQSR L VR QT K ++ +VHMLN+T
Sbjct: 339 NAAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 398 CATERALCCILENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 452
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 533 ELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
ELDD KYLIATSEQP+ A+H W+ LPIRY+G ST FR+E A
Sbjct: 231 ELDDQKYLIATSEQPLTALHAGEWILPKQLPIRYMGFSTNFRKEAGA 277
>gi|407041601|gb|EKE40844.1| serine--tRNA ligase [Entamoeba nuttalli P19]
Length = 453
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 160/230 (69%), Gaps = 18/230 (7%)
Query: 17 ELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
ELDD KYLIATSEQP+ A+H W+ LPIRY+G ST FR+E G+HG+DT GIFRVHQ
Sbjct: 231 ELDDQKYLIATSEQPLTALHAGEWILPKQLPIRYMGFSTNFRKEAGAHGKDTWGIFRVHQ 290
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQF +T P D+SW+M +EMI+NS +F+ L I YRVVNIVSGALN+AAAKK DLE
Sbjct: 291 FEKIEQFCMTLP--DKSWEMHEEMIKNSRDFFESLKIPYRVVNIVSGALNNAAAKKYDLE 348
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
+FPG +RELVSCSNC DYQSR L VR QT +K + +T CAT R +C I
Sbjct: 349 GYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTLCATERALCCI 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
LE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 408 LENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 452
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P D+SW+ +EMI+NS +F+ L I YRVVNIVSGALN
Sbjct: 281 DTWGIFRVHQFEKIEQFCMTLP--DKSWEMHEEMIKNSRDFFESLKIPYRVVNIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE +FPG +RELVSCSNC YQSR L VR QT K ++ +VHMLN+T
Sbjct: 339 NAAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 398 CATERALCCILENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 452
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 533 ELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
ELDD KYLIATSEQP+ A+H W+ LPIRY+G ST FR+E A
Sbjct: 231 ELDDQKYLIATSEQPLTALHAGEWILPKQLPIRYMGFSTNFRKEAGA 277
>gi|380490092|emb|CCF36255.1| seryl-tRNA synthetase [Colletotrichum higginsianum]
Length = 461
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 154/231 (66%), Gaps = 19/231 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+ A+H + W+ + LPI+Y G STCFR+E G HG++ G+FRVHQFEK
Sbjct: 237 EEKYLIATSEQPLSALHSEEWIQGSQLPIKYAGYSTCFRKEAGKHGKEAWGLFRVHQFEK 296
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF+ P D SWK DEMI SEEFY LG+ YRVV+IVSGALN+AAAKK DLEAWF
Sbjct: 297 IEQFIFCKPED--SWKHFDEMIGASEEFYKSLGLPYRVVSIVSGALNNAAAKKYDLEAWF 354
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------------IYATACATTRVICA 185
P ++ELVSCSNC DYQ+R L VRYG K K + AT CAT R +C
Sbjct: 355 PFQQEYKELVSCSNCTDYQTRELEVRYGVKKAKEAPGGGRKEYVHALNATLCATERTLCC 414
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
ILE +QT G ++P+ LRK++P + +P+V P + QKK+
Sbjct: 415 ILENYQTPDGFKVPEVLRKYIPG----QPEFLPYVAELPKEITVVAGQKKK 461
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 122/182 (67%), Gaps = 12/182 (6%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
G+FRVHQFEK+EQF+ P D SWK DEMI SEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 287 GLFRVHQFEKIEQFIFCKPED--SWKHFDEMIGASEEFYKSLGLPYRVVSIVSGALNNAA 344
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-----KIEFVHMLNA 420
AKK DLEAWFP ++ELVSCSNC YQ+R L VRYG KK E + E+VH LNA
Sbjct: 345 AKKYDLEAWFPFQQEYKELVSCSNCTDYQTRELEVRYG-VKKAKEAPGGGRKEYVHALNA 403
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
T CAT R +C ILE +QT G ++P+ LRK++P + +P+V P + QK
Sbjct: 404 TLCATERTLCCILENYQTPDGFKVPEVLRKYIPG----QPEFLPYVAELPKEITVVAGQK 459
Query: 481 KQ 482
K+
Sbjct: 460 KK 461
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 496 MIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 555
M +N+ A ++ + L +V G GE +KYLIATSEQP+ A+H + W
Sbjct: 211 MNRNQMAKTAQLEQFDEELYKVTGDGE-------------EKYLIATSEQPLSALHSEEW 257
Query: 556 LPEASLPIRYLGVSTCFRQEC 576
+ + LPI+Y G STCFR+E
Sbjct: 258 IQGSQLPIKYAGYSTCFRKEA 278
>gi|407859775|gb|EKG07151.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 477
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 152/226 (67%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSE PI A HR W E P++Y G+S+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 EEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF++ SP ++ESW+ L+EMI+ SEEF LG+ YR +NI SGALN+AAAKK D+EAWF
Sbjct: 317 LEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALNNAAAKKYDVEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA------------TACATTRVICAI 186
P SGAFRELVSCSNC DYQ+R + R+G + + A T CA TR +C I
Sbjct: 377 PASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLNGTLCAITRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKK 232
E +QTE GV IPD LR ++ + + + F P EE K
Sbjct: 437 CENYQTEEGVVIPDVLRPYMMGLEM-----LKFADNVPSAEETEPK 477
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 121/179 (67%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQF++ SP ++ESW+ L+EMI+ SEEF LG+ YR +NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG---QTKKMNEKIEFVHMLN 419
+AAAKK D+EAWFP SGAFRELVSCSNC YQ+R + R+G + N E+ HMLN
Sbjct: 364 NAAAKKYDVEAWFPASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLN 423
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
T CA TR +C I E +QTE GV IPD LR ++ + + + F P EE K
Sbjct: 424 GTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGLEM-----LKFADNVPSAEETEPK 477
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSE PI A HR W E P++Y G+S+CFR+E A
Sbjct: 257 EEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGA 300
>gi|403217053|emb|CCK71548.1| hypothetical protein KNAG_0H01350 [Kazachstania naganishii CBS
8797]
Length = 458
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/226 (56%), Positives = 153/226 (67%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H + W P+ LPIRY G S+CFR+E GSHG+D GIFRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGFSSCFRREAGSHGKDAWGIFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ D+MI NSEEFY L + YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFVLTEP--EKSWEEFDKMIANSEEFYQALKLPYRVVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C IL
Sbjct: 357 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKLSDREKKYVHCLNSTLSATERALCCIL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QTE G+ IP+ LRKF+P E IP+ K P + KK+
Sbjct: 417 ENYQTEEGLVIPEVLRKFIPG----EPEFIPYAKELPKNSTSNKKK 458
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 120/177 (67%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D+MI NSEEFY L + YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDKMIANSEEFYQALKLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKLSDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C ILE +QTE G+ IP+ LRKF+P E IP+ K P + KK+
Sbjct: 406 SATERALCCILENYQTEEGLVIPEVLRKFIPG----EPEFIPYAKELPKNSTSNKKK 458
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRTYFH 586
D+KYLIATSEQPI A H + W P+ LPIRY G S+CFR+E + G+ R +
Sbjct: 239 DEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGFSSCFRREAGSHGKDAWGIFRVHAF 298
Query: 587 VTCAQREGLLSEATSEEVDQ----ADPFYAHCRL 616
Q E + EE D+ ++ FY +L
Sbjct: 299 EKIEQFVLTEPEKSWEEFDKMIANSEEFYQALKL 332
>gi|384495003|gb|EIE85494.1| seryl-tRNA synthetase [Rhizopus delemar RA 99-880]
Length = 443
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 155/217 (71%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
+DKYLIATSEQPI A H W P LPI+Y G STCFR+E G+HG+DT GIFRVHQF
Sbjct: 232 EDKYLIATSEQPISAFHSGEWFEKPSEQLPIKYAGYSTCFRKEAGAHGKDTWGIFRVHQF 291
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT+P ++SW+M +EMI++SE F+ LG++YRVV IVSGALN+AAAKK DLEA
Sbjct: 292 EKIEQFVLTAP--EKSWEMFNEMIEHSEGFFQSLGLSYRVVAIVSGALNNAAAKKYDLEA 349
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSR L +R G K +K Y +T CAT R +CA+L
Sbjct: 350 WFPYQGEYKELVSCSNCTDYQSRNLEIRCGVKKMSDREKKYVHCLNSTLCATERAMCALL 409
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E Q E G+ IP L VP Y++ IP+VK AP
Sbjct: 410 ENWQREDGLEIPPPL---VP--YMDGRTFIPYVKPAP 441
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 123/168 (73%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQFVLT+P ++SW+ +EMI++SE F+ LG++YRVV IVSGALN
Sbjct: 281 DTWGIFRVHQFEKIEQFVLTAP--EKSWEMFNEMIEHSEGFFQSLGLSYRVVAIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 339 NAAAKKYDLEAWFPYQGEYKELVSCSNCTDYQSRNLEIRCGVKKMSDREKKYVHCLNSTL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
CAT R +CA+LE Q E G+ IP L VP Y++ IP+VK AP
Sbjct: 399 CATERAMCALLENWQREDGLEIPPPL---VP--YMDGRTFIPYVKPAP 441
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
+DKYLIATSEQPI A H W P LPI+Y G STCFR+E A
Sbjct: 232 EDKYLIATSEQPISAFHSGEWFEKPSEQLPIKYAGYSTCFRKEAGA 277
>gi|71421977|ref|XP_811974.1| seryl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70876700|gb|EAN90123.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 477
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/226 (52%), Positives = 152/226 (67%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSE PI A HR W E P++Y G+S+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 EEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF++ SP ++ESW+ L+EMI+ SEEF LG+ YR +NI SGALN+AAAKK D+EAWF
Sbjct: 317 LEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALNNAAAKKYDVEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA------------TACATTRVICAI 186
P SGAFRELVSCSNC DYQ+R + R+G + + A T CA TR +C I
Sbjct: 377 PASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLNGTLCAITRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKK 232
E +QTE GV +PD LR ++ + + + F P EE K
Sbjct: 437 CENYQTEEGVVVPDVLRPYMMGLEM-----LKFADNVPSAEETESK 477
Score = 192 bits (489), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 121/179 (67%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQF++ SP ++ESW+ L+EMI+ SEEF LG+ YR +NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG---QTKKMNEKIEFVHMLN 419
+AAAKK D+EAWFP SGAFRELVSCSNC YQ+R + R+G + N E+ HMLN
Sbjct: 364 NAAAKKYDVEAWFPASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLN 423
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
T CA TR +C I E +QTE GV +PD LR ++ + + + F P EE K
Sbjct: 424 GTLCAITRTMCCICENYQTEEGVVVPDVLRPYMMGLEM-----LKFADNVPSAEETESK 477
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSE PI A HR W E P++Y G+S+CFR+E A
Sbjct: 257 EEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGA 300
>gi|407424946|gb|EKF39213.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 152/226 (67%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSE PI A HR W E P++Y G+S+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 257 EEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGAHGRDTLGIFRVHQFDK 316
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF++ SP ++ESW+ L+EMI+ SEEF LG+ YR +NI SGALN+AAAKK D+EAWF
Sbjct: 317 LEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALNNAAAKKYDVEAWF 376
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA------------TACATTRVICAI 186
P SGAFRELVSCSNC DYQ+R + R+G + + A T CA TR +C I
Sbjct: 377 PASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLNGTLCAITRTMCCI 436
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKK 232
E +QTE GV IPD LR ++ + + + F P EE K
Sbjct: 437 CENYQTEEGVVIPDVLRPYMMGLEM-----LKFADNVPSTEETEPK 477
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 121/179 (67%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQF++ SP ++ESW+ L+EMI+ SEEF LG+ YR +NI SGALN
Sbjct: 304 DTLGIFRVHQFDKLEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG---QTKKMNEKIEFVHMLN 419
+AAAKK D+EAWFP SGAFRELVSCSNC YQ+R + R+G + N E+ HMLN
Sbjct: 364 NAAAKKYDVEAWFPASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLN 423
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
T CA TR +C I E +QTE GV IPD LR ++ + + + F P EE K
Sbjct: 424 GTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGLEM-----LKFADNVPSTEETEPK 477
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSE PI A HR W E P++Y G+S+CFR+E A
Sbjct: 257 EEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGA 300
>gi|346979592|gb|EGY23044.1| seryl-tRNA synthetase [Verticillium dahliae VdLs.17]
Length = 446
Score = 245 bits (626), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 146/215 (67%), Gaps = 19/215 (8%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQP+ +H D WL LPI+Y G STCFR+E G+HGRD G+FRVHQFEKV
Sbjct: 238 DKYLIATSEQPLSCLHADEWLQPGQLPIKYAGFSTCFRKEAGNHGRDAWGVFRVHQFEKV 297
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQFVL P D SWK DEMI SEEFY LG+ Y+VV+IVSGALN++AAKK DLEA+FP
Sbjct: 298 EQFVLCKPED--SWKFFDEMIATSEEFYKSLGLPYQVVSIVSGALNNSAAKKFDLEAYFP 355
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------------IYATACATTRVICAI 186
G ++ELVSCSNC DYQ+R L +RYG K K + AT A R +C +
Sbjct: 356 FQGEYKELVSCSNCTDYQTRELEIRYGVKKAKEAPGSGKKEYVHALNATLTAAERTLCCV 415
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
LE +QT G+ +P+ LRK++P + IPF K
Sbjct: 416 LENYQTAEGLNVPEVLRKYIPG----QPEFIPFQK 446
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 117/170 (68%), Gaps = 12/170 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEKVEQFVL P D SWK DEMI SEEFY LG+ Y+VV+IVSGALN
Sbjct: 284 DAWGVFRVHQFEKVEQFVLCKPED--SWKFFDEMIATSEEFYKSLGLPYQVVSIVSGALN 341
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-----KIEFVHM 417
++AAKK DLEA+FP G ++ELVSCSNC YQ+R L +RYG KK E K E+VH
Sbjct: 342 NSAAKKFDLEAYFPFQGEYKELVSCSNCTDYQTRELEIRYG-VKKAKEAPGSGKKEYVHA 400
Query: 418 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
LNAT A R +C +LE +QT G+ +P+ LRK++P + IPF K
Sbjct: 401 LNATLTAAERTLCCVLENYQTAEGLNVPEVLRKYIPG----QPEFIPFQK 446
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 30/41 (73%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DKYLIATSEQP+ +H D WL LPI+Y G STCFR+E
Sbjct: 238 DKYLIATSEQPLSCLHADEWLQPGQLPIKYAGFSTCFRKEA 278
>gi|410079651|ref|XP_003957406.1| hypothetical protein KAFR_0E01170 [Kazachstania africana CBS 2517]
gi|372463992|emb|CCF58271.1| hypothetical protein KAFR_0E01170 [Kazachstania africana CBS 2517]
Length = 458
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 155/229 (67%), Gaps = 17/229 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPIRY+G STCFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFESPQEQLPIRYVGYSTCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D+MI +SEEFY L + YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDKMIDHSEEFYKSLKLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLSATERALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
ILE +QTE G+ +P+ LRK++P E +PFVK P + KK+
Sbjct: 414 CILENYQTEDGLIVPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 458
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 121/177 (68%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D+MI +SEEFY L + YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDKMIDHSEEFYKSLKLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C ILE +QTE G+ +P+ LRK++P E +PFVK P + KK+
Sbjct: 406 SATERALCCILENYQTEDGLIVPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 458
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRT 583
D D+KYLIATSEQPI A H W P+ LPIRY+G STCFR+E + G+ R
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFESPQEQLPIRYVGYSTCFRREAGSHGKDAWGIFRV 295
Query: 584 YFHVTCAQREGLLSEATSEE----VDQADPFYAHCRL 616
+ Q E + EE +D ++ FY +L
Sbjct: 296 HAFEKIEQFVLTEPEKSWEEFDKMIDHSEEFYKSLKL 332
>gi|124783895|gb|ABN14955.1| seryl-aminoacyl-tRNA synthetase 1 [Taenia asiatica]
Length = 166
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/166 (69%), Positives = 132/166 (79%), Gaps = 1/166 (0%)
Query: 3 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGS 62
GK E GD+ E +E + KYLIATSEQ I A HR W+ LP+RY G+STCFRQEVGS
Sbjct: 2 GKREAAGDAGNEAEE-EVKYLIATSEQTIAAYHRGEWMSPTELPLRYAGISTCFRQEVGS 60
Query: 63 HGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSG 122
HGRDTRGIFRVHQFEKVEQF +TSP+D+ SW+M DEMI +E F+ LGI YRVV+IVSG
Sbjct: 61 HGRDTRGIFRVHQFEKVEQFCITSPYDNASWEMFDEMISTAERFFKVLGIPYRVVSIVSG 120
Query: 123 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT 168
LN+AAA K DLE W+PGS AFRELVSCSNC DYQSRRL +R+GQT
Sbjct: 121 ELNNAAAMKYDLEGWYPGSKAFRELVSCSNCTDYQSRRLGIRFGQT 166
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 85/103 (82%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVEQF +TSP+D+ SW+ DEMI +E F+ LGI YRVV+IVSG LN
Sbjct: 64 DTRGIFRVHQFEKVEQFCITSPYDNASWEMFDEMISTAERFFKVLGIPYRVVSIVSGELN 123
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQT 405
+AAA K DLE W+PGS AFRELVSCSNC YQSRRL +R+GQT
Sbjct: 124 NAAAMKYDLEGWYPGSKAFRELVSCSNCTDYQSRRLGIRFGQT 166
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 519 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
GK E GD+ E +E + KYLIATSEQ I A HR W+ LP+RY G+STCFRQE +
Sbjct: 2 GKREAAGDAGNEAEE-EVKYLIATSEQTIAAYHRGEWMSPTELPLRYAGISTCFRQEVGS 60
>gi|440790605|gb|ELR11886.1| serine-tRNA ligase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 459
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 148/220 (67%), Gaps = 15/220 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSEQPI A H + WL LPIRY G S+CFR+E G+HG+DT GIFRVHQFEK
Sbjct: 233 DEKYLIATSEQPISAFHAEEWLEPKDLPIRYAGTSSCFRKEAGAHGKDTWGIFRVHQFEK 292
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF LT P ++SW+ + M++ +E FY L + Y VV IVSG LN+AAAKKLDLEAWF
Sbjct: 293 IEQFCLTEP--EKSWEEHENMVKTAEAFYQSLELPYHVVAIVSGELNNAAAKKLDLEAWF 350
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICAILETH 190
P G FRELVS SNC DYQSR L VR G KQ + AT CATTR IC ILE +
Sbjct: 351 PAFGEFRELVSASNCTDYQSRSLEVRCGSRKQGGEKKYVHMLNATLCATTRTICCILENY 410
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
QT GV +P L+ ++ + IPFVK AP EE
Sbjct: 411 QTPEGVAVPKVLQPYLGGLEF-----IPFVKEAPKKHEEA 445
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 119/174 (68%), Gaps = 8/174 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF LT P ++SW+ + M++ +E FY L + Y VV IVSG LN
Sbjct: 280 DTWGIFRVHQFEKIEQFCLTEP--EKSWEEHENMVKTAEAFYQSLELPYHVVAIVSGELN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP G FRELVS SNC YQSR L VR G K+ EK ++VHMLNAT
Sbjct: 338 NAAAKKLDLEAWFPAFGEFRELVSASNCTDYQSRSLEVRCGSRKQGGEK-KYVHMLNATL 396
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476
CATTR IC ILE +QT GV +P L+ ++ + IPFVK AP EE
Sbjct: 397 CATTRTICCILENYQTPEGVAVPKVLQPYLGGLEF-----IPFVKEAPKKHEEA 445
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H + WL LPIRY G S+CFR+E A
Sbjct: 233 DEKYLIATSEQPISAFHAEEWLEPKDLPIRYAGTSSCFRKEAGA 276
>gi|183231706|ref|XP_001913612.1| seryl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
gi|169802371|gb|EDS89615.1| seryl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 251
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 160/230 (69%), Gaps = 18/230 (7%)
Query: 17 ELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
ELDD KYLIATSEQP+ A+H W+ LPIRY+G ST FR+E G+HG+DT GIFRVHQ
Sbjct: 29 ELDDQKYLIATSEQPLTALHAGEWILPKQLPIRYMGFSTNFRKEAGAHGKDTWGIFRVHQ 88
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQF +T P D+SW+M +EMI+NS +F+ L I YRVVNIVSGALN+AAAKK DLE
Sbjct: 89 FEKIEQFCMTLP--DKSWEMHEEMIKNSRDFFESLKIPYRVVNIVSGALNNAAAKKYDLE 146
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
+FPG +RELVSCSNC DYQSR L VR QT +K + +T CAT R +C I
Sbjct: 147 GYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTLCATERALCCI 205
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
LE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 206 LENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 250
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P D+SW+ +EMI+NS +F+ L I YRVVNIVSGALN
Sbjct: 79 DTWGIFRVHQFEKIEQFCMTLP--DKSWEMHEEMIKNSRDFFESLKIPYRVVNIVSGALN 136
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE +FPG +RELVSCSNC YQSR L VR QT K ++ +VHMLN+T
Sbjct: 137 NAAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTL 195
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 196 CATERALCCILENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 250
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 533 ELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
ELDD KYLIATSEQP+ A+H W+ LPIRY+G ST FR+E A
Sbjct: 29 ELDDQKYLIATSEQPLTALHAGEWILPKQLPIRYMGFSTNFRKEAGA 75
>gi|302415006|ref|XP_003005335.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
gi|261356404|gb|EEY18832.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
Length = 451
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 146/215 (67%), Gaps = 19/215 (8%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQP+ +H D WL LPI+Y G STCFR+E G+HGRD G+FRVHQFEKV
Sbjct: 243 DKYLIATSEQPLSCLHADEWLQPGQLPIKYAGFSTCFRKEAGNHGRDAWGVFRVHQFEKV 302
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQFVL P D SWK DEMI SEEFY LG+ Y+VV+IVSGALN++AAKK DLEA+FP
Sbjct: 303 EQFVLCKPED--SWKFFDEMIATSEEFYKSLGLPYQVVSIVSGALNNSAAKKFDLEAYFP 360
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------------IYATACATTRVICAI 186
G ++ELVSCSNC DYQ+R L +RYG K K + AT A R +C +
Sbjct: 361 FQGEYKELVSCSNCTDYQTRELEIRYGVKKAKEAPGSGKKEYVHALNATLTAAERTLCCV 420
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
LE +QT G+ +P+ LRK++P + IPF K
Sbjct: 421 LENYQTAEGLNVPEVLRKYIPG----QPEFIPFQK 451
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 117/170 (68%), Gaps = 12/170 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEKVEQFVL P D SWK DEMI SEEFY LG+ Y+VV+IVSGALN
Sbjct: 289 DAWGVFRVHQFEKVEQFVLCKPED--SWKFFDEMIATSEEFYKSLGLPYQVVSIVSGALN 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-----KIEFVHM 417
++AAKK DLEA+FP G ++ELVSCSNC YQ+R L +RYG KK E K E+VH
Sbjct: 347 NSAAKKFDLEAYFPFQGEYKELVSCSNCTDYQTRELEIRYG-VKKAKEAPGSGKKEYVHA 405
Query: 418 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
LNAT A R +C +LE +QT G+ +P+ LRK++P + IPF K
Sbjct: 406 LNATLTAAERTLCCVLENYQTAEGLNVPEVLRKYIPG----QPEFIPFQK 451
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 30/41 (73%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DKYLIATSEQP+ +H D WL LPI+Y G STCFR+E
Sbjct: 243 DKYLIATSEQPLSCLHADEWLQPGQLPIKYAGFSTCFRKEA 283
>gi|310792722|gb|EFQ28183.1| seryl-tRNA synthetase [Glomerella graminicola M1.001]
Length = 456
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 155/231 (67%), Gaps = 19/231 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+ A+H + WL + LPI+Y G STCFR+E G HG++ G+FRVHQFEK
Sbjct: 232 EEKYLIATSEQPLSALHSEEWLQASQLPIKYAGYSTCFRKEAGKHGKEAWGLFRVHQFEK 291
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV +ESWK DEMI SEEFY LG+ YRVV+IVSGALN+AAAKK DLEAWF
Sbjct: 292 IEQFVFCKA--EESWKHFDEMIAASEEFYKSLGLPYRVVSIVSGALNNAAAKKYDLEAWF 349
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------------IYATACATTRVICA 185
P ++ELVSCSNC DYQ+R L VRYG K K + AT CAT R +C
Sbjct: 350 PFQQEYKELVSCSNCTDYQTRELEVRYGVKKAKEAPGAGRKDYVHALNATLCATERTLCC 409
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
I+E +QT G+++P+ LRK++P + +P+V P + QKK+
Sbjct: 410 IMENYQTPDGLKVPEVLRKYIPG----QPEFLPYVAELPKEITVVAGQKKK 456
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 123/182 (67%), Gaps = 12/182 (6%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
G+FRVHQFEK+EQFV +ESWK DEMI SEEFY LG+ YRVV+IVSGALN+AA
Sbjct: 282 GLFRVHQFEKIEQFVFCKA--EESWKHFDEMIAASEEFYKSLGLPYRVVSIVSGALNNAA 339
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-----KIEFVHMLNA 420
AKK DLEAWFP ++ELVSCSNC YQ+R L VRYG KK E + ++VH LNA
Sbjct: 340 AKKYDLEAWFPFQQEYKELVSCSNCTDYQTRELEVRYG-VKKAKEAPGAGRKDYVHALNA 398
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
T CAT R +C I+E +QT G+++P+ LRK++P + +P+V P + QK
Sbjct: 399 TLCATERTLCCIMENYQTPDGLKVPEVLRKYIPG----QPEFLPYVAELPKEITVVAGQK 454
Query: 481 KQ 482
K+
Sbjct: 455 KK 456
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 496 MIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSW 555
M +N+ A ++ + L +V G GE +KYLIATSEQP+ A+H + W
Sbjct: 206 MNRNQMAKTAQLEQFDEELYKVTGDGE-------------EKYLIATSEQPLSALHSEEW 252
Query: 556 LPEASLPIRYLGVSTCFRQEC 576
L + LPI+Y G STCFR+E
Sbjct: 253 LQASQLPIKYAGYSTCFRKEA 273
>gi|71407799|ref|XP_806343.1| seryl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70870063|gb|EAN84492.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 227
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 152/226 (67%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSE PI A HR W E P++Y G+S+CFR+E G+HGRDT GIFRVHQF+K
Sbjct: 7 EEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGAHGRDTLGIFRVHQFDK 66
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF++ SP ++ESW+ L+EMI+ SEEF LG+ YR +NI SGALN+AAAKK D+EAWF
Sbjct: 67 LEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALNNAAAKKYDVEAWF 126
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA------------TACATTRVICAI 186
P SGAFRELVSCSNC DYQ+R + R+G + + A T CA TR +C I
Sbjct: 127 PASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLNGTLCAITRTMCCI 186
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKK 232
E +QTE GV IPD LR ++ + + + F P EE K
Sbjct: 187 CENYQTEEGVVIPDVLRPYMMGLEM-----LKFADNVPSAEETEPK 227
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 121/179 (67%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQF++ SP ++ESW+ L+EMI+ SEEF LG+ YR +NI SGALN
Sbjct: 54 DTLGIFRVHQFDKLEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALN 113
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG---QTKKMNEKIEFVHMLN 419
+AAAKK D+EAWFP SGAFRELVSCSNC YQ+R + R+G + N E+ HMLN
Sbjct: 114 NAAAKKYDVEAWFPASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLN 173
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
T CA TR +C I E +QTE GV IPD LR ++ + + + F P EE K
Sbjct: 174 GTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGLEM-----LKFADNVPSAEETEPK 227
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSE PI A HR W E P++Y G+S+CFR+E A
Sbjct: 7 EEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGA 50
>gi|342351026|pdb|3QNE|A Chain A, Candida Albicans Seryl-Trna Synthetase
gi|342351028|pdb|3QO7|A Chain A, Crystal Structure Of The Seryl-Trna Synthetase From
Candida Albicans
gi|342351029|pdb|3QO8|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Candida
Albicans
Length = 485
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/252 (51%), Positives = 158/252 (62%), Gaps = 21/252 (8%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G +Q + +T AT R IC
Sbjct: 354 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTIC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKL 244
ILE +Q E G+ IP+ LRK++P E IP++K P + KK K G K
Sbjct: 414 CILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK----GKNPKN 465
Query: 245 TMSLFSQVGSHG 256
T S+ G +G
Sbjct: 466 TTSVKKAKGKNG 477
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ ++ ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 406 SATERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGS 284
>gi|342351027|pdb|3QO5|A Chain A, Crystal Structure Of The Seryl-Trna Synthetase From
Candida Albicans
Length = 485
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/252 (51%), Positives = 158/252 (62%), Gaps = 21/252 (8%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G +Q + +T AT R IC
Sbjct: 354 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTIC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKL 244
ILE +Q E G+ IP+ LRK++P E IP++K P + KK K G K
Sbjct: 414 CILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK----GKNPKN 465
Query: 245 TMSLFSQVGSHG 256
T S+ G +G
Sbjct: 466 TTSVKKAKGKNG 477
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ ++ ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 406 SATERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGS 284
>gi|389746133|gb|EIM87313.1| serine-tRNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 150/212 (70%), Gaps = 14/212 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H D W P+ LPI+Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 235 DEKYLIATSEQPISAFHSDEWFESPDTQLPIQYAGYSTCFRKEAGSAGRDMWGIFRVHQF 294
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T+P D+SW+M + M+ NSE FY LGI YRVV IVSGALN AAA+K DLEA
Sbjct: 295 EKVEQFCITAP--DKSWEMFETMVANSEAFYQSLGIPYRVVGIVSGALNLAAAQKFDLEA 352
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP GA++ELVSCSNC DYQSRRL VR G K +K+Y T CAT R +C ++
Sbjct: 353 WFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKKSDQTRKVYVHMLNGTLCATERALCCLV 412
Query: 188 ETHQTETGVRIPDCLRKFVPAV-YLNEAGEIP 218
E +QT G+ +P+ LR ++ +L A E+P
Sbjct: 413 ENYQTPDGLVVPEVLRPYMQGRDFLPWAKELP 444
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 116/166 (69%), Gaps = 3/166 (1%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQF +T+P D+SW+ + M+ NSE FY LGI YRVV IVSG
Sbjct: 281 AGRDMWGIFRVHQFEKVEQFCITAP--DKSWEMFETMVANSEAFYQSLGIPYRVVGIVSG 338
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAA+K DLEAWFP GA++ELVSCSNC YQSRRL VR G K + +VHMLN
Sbjct: 339 ALNLAAAQKFDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKKSDQTRKVYVHMLN 398
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIP 464
T CAT R +C ++E +QT G+ +P+ LR ++ ++ A E+P
Sbjct: 399 GTLCATERALCCLVENYQTPDGLVVPEVLRPYMQGRDFLPWAKELP 444
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI A H D W P+ LPI+Y G STCFR+E +
Sbjct: 235 DEKYLIATSEQPISAFHSDEWFESPDTQLPIQYAGYSTCFRKEAGSA 281
>gi|336372758|gb|EGO01097.1| hypothetical protein SERLA73DRAFT_179157 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385607|gb|EGO26754.1| hypothetical protein SERLADRAFT_464149 [Serpula lacrymans var.
lacrymans S7.9]
Length = 452
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 150/217 (69%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H D W P+ LP+ Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 235 DEKYLIATSEQPISAFHSDEWFEDPKTQLPLLYAGYSTCFRKEAGSAGRDMWGIFRVHQF 294
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT+P +ESW+MLD M+ NSE FY LG+ YRVV IVSGALN AAA K DLEA
Sbjct: 295 EKIEQFVLTAP--EESWEMLDRMLGNSEAFYQSLGLPYRVVAIVSGALNLAAAMKYDLEA 352
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVICAIL 187
WFP GA++ELVSCSNC DYQSRRL VR G ++K+Y T CAT R +C ++
Sbjct: 353 WFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKSKDQQRKVYVHMLNGTLCATERALCCLV 412
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+ IP+ LR Y+ +P+VK P
Sbjct: 413 ENYQTPDGLVIPEVLRP-----YMQGRDFLPWVKELP 444
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 118/171 (69%), Gaps = 7/171 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEK+EQFVLT+P +ESW+ LD M+ NSE FY LG+ YRVV IVSG
Sbjct: 281 AGRDMWGIFRVHQFEKIEQFVLTAP--EESWEMLDRMLGNSEAFYQSLGLPYRVVAIVSG 338
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAA K DLEAWFP GA++ELVSCSNC YQSRRL VR G K ++ +VHMLN
Sbjct: 339 ALNLAAAMKYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKSKDQQRKVYVHMLN 398
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
T CAT R +C ++E +QT G+ IP+ LR Y+ +P+VK P
Sbjct: 399 GTLCATERALCCLVENYQTPDGLVIPEVLRP-----YMQGRDFLPWVKELP 444
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI A H D W P+ LP+ Y G STCFR+E +
Sbjct: 235 DEKYLIATSEQPISAFHSDEWFEDPKTQLPLLYAGYSTCFRKEAGSA 281
>gi|302502039|ref|XP_003013011.1| hypothetical protein ARB_00894 [Arthroderma benhamiae CBS 112371]
gi|291176572|gb|EFE32371.1| hypothetical protein ARB_00894 [Arthroderma benhamiae CBS 112371]
Length = 480
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/241 (51%), Positives = 159/241 (65%), Gaps = 25/241 (10%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E G+HG+D GIFRVH
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVH 289
Query: 75 QFEKV-------EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHA 127
QFEKV EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN+A
Sbjct: 290 QFEKVCIGAPKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNA 347
Query: 128 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACA 178
A+KKLDLEAWFP G ++ELVSCSNC DYQ+R L +R+G K + AT CA
Sbjct: 348 ASKKLDLEAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCA 407
Query: 179 TTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKE 238
T R +C ILE +Q E G+ +P+ LRK++P +P+V+ P D T QK + +
Sbjct: 408 TERALCCILENYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAK 460
Query: 239 G 239
G
Sbjct: 461 G 461
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 125/190 (65%), Gaps = 16/190 (8%)
Query: 303 DTRGIFRVHQFEKV-------EQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVN 355
D GIFRVHQFEKV EQF++T P +ESWK DEMI SEEFY L I Y+V+
Sbjct: 281 DAWGIFRVHQFEKVCIGAPKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIA 338
Query: 356 IVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFV 415
IVSGALN+AA+KKLDLEAWFP G ++ELVSCSNC YQ+R L +R+G K + K +
Sbjct: 339 IVSGALNNAASKKLDLEAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYC 398
Query: 416 HMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
H LNAT CAT R +C ILE +Q E G+ +P+ LRK++P +P+V+ P D
Sbjct: 399 HALNATLCATERALCCILENYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD--- 451
Query: 476 TKKQKKQKEG 485
T QK + +G
Sbjct: 452 TTSQKVKAKG 461
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D DKYLIATSEQP+ A+H W+ E LPI+Y G STC+R+E A
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGA 277
>gi|255726666|ref|XP_002548259.1| seryl-tRNA synthetase [Candida tropicalis MYA-3404]
gi|240134183|gb|EER33738.1| seryl-tRNA synthetase [Candida tropicalis MYA-3404]
Length = 462
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 151/230 (65%), Gaps = 17/230 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G +Q + +T AT R IC
Sbjct: 354 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTIC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
ILE +Q E G+ +P+ LRK++P E IPFVK P + KK K
Sbjct: 414 CILENYQKEDGLVVPEVLRKYIPG----EPEFIPFVKELPKNTTSAKKSK 459
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ ++ ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E G+ +P+ LRK++P E IPFVK P + KK K
Sbjct: 406 SATERTICCILENYQKEDGLVVPEVLRKYIPG----EPEFIPFVKELPKNTTSAKKSK 459
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
D D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREA 282
>gi|308806914|ref|XP_003080768.1| SYS_HELAN Seryl-tRNA synthetase (ISS) [Ostreococcus tauri]
gi|116059229|emb|CAL54936.1| SYS_HELAN Seryl-tRNA synthetase (ISS) [Ostreococcus tauri]
Length = 624
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 144/215 (66%), Gaps = 15/215 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E +DKYLIATSEQ C+ R WL LPIR G STCFR+EVGSHGRDT GIFRVHQF
Sbjct: 232 EGEDKYLIATSEQTCCSYLRKRWLNTNQLPIRLAGYSTCFRKEVGSHGRDTLGIFRVHQF 291
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV S D SWK +D MI NSE FY L I Y+VVNIVSGALN AAAKK DLEA
Sbjct: 292 EKVEQFVAVSGEGDASWKEMDRMIGNSEAFYQSLNIPYQVVNIVSGALNDAAAKKFDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIY-----ATACATTRVICAI 186
WFP S FRELVSCSNCLDYQSRRL +R G K+ K Y +T AT R +C +
Sbjct: 352 WFPSSRTFRELVSCSNCLDYQSRRLEIREGAPKKGPEKVKAYVHLLNSTLTATERTLCCV 411
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
+E QT G+ +P LR ++ + IPFV+
Sbjct: 412 IENWQTPEGLVVPPALRPWMNGIEF-----IPFVR 441
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/166 (59%), Positives = 116/166 (69%), Gaps = 6/166 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFV S D SWK +D MI NSE FY L I Y+VVNIVSGALN
Sbjct: 281 DTLGIFRVHQFEKVEQFVAVSGEGDASWKEMDRMIGNSEAFYQSLNIPYQVVNIVSGALN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE-FVHMLNAT 421
AAAKK DLEAWFP S FRELVSCSNCL YQSRRL +R G KK EK++ +VH+LN+T
Sbjct: 341 DAAAKKFDLEAWFPSSRTFRELVSCSNCLDYQSRRLEIREGAPKKGPEKVKAYVHLLNST 400
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
AT R +C ++E QT G+ +P LR ++ + IPFV+
Sbjct: 401 LTATERTLCCVIENWQTPEGLVVPPALRPWMNGIEF-----IPFVR 441
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 29/43 (67%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
E +DKYLIATSEQ C+ R WL LPIR G STCFR+E
Sbjct: 232 EGEDKYLIATSEQTCCSYLRKRWLNTNQLPIRLAGYSTCFRKE 274
>gi|260945325|ref|XP_002616960.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238848814|gb|EEQ38278.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 457
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 148/225 (65%), Gaps = 17/225 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P LPIRY G S+CFR+E GSHG+D GIFRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFESPAEQLPIRYAGYSSCFRREAGSHGKDAWGIFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ D MI NSEEFY LG+ YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFVLTEP--EKSWEEFDRMIANSEEFYQSLGLPYRVVGIVSGELNNAAAKKFDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G +Q + +T AT R +C IL
Sbjct: 357 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQSEKKYVHCLNSTLSATERALCCIL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKK 232
E +Q E G+ +P+ LRK++P +PFVK P + KK
Sbjct: 417 ENYQKEDGIVVPEVLRKYIPG----SPEFLPFVKELPKNSTSKKK 457
Score = 189 bits (480), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 118/176 (67%), Gaps = 6/176 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI NSEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIANSEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 346 NAAAKKFDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQSEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
AT R +C ILE +Q E G+ +P+ LRK++P +PFVK P + KK
Sbjct: 406 SATERALCCILENYQKEDGIVVPEVLRKYIPG----SPEFLPFVKELPKNSTSKKK 457
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H W P LPIRY G S+CFR+E +
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFESPAEQLPIRYAGYSSCFRREAGS 284
>gi|354543459|emb|CCE40178.1| hypothetical protein CPAR2_102160 [Candida parapsilosis]
Length = 458
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/229 (55%), Positives = 154/229 (67%), Gaps = 17/229 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPIRY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFEKPQEQLPIRYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGASEEFYQSLGLPYRVVGIVSGELNNAAAKKFD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R IC
Sbjct: 354 LEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATERTIC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
ILE +Q E G+ +P+ LRK++P E IP+VK P + K++
Sbjct: 414 CILENYQREDGLVVPEVLRKYIPG----EPEFIPYVKELPKNSTSQKRK 458
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 119/177 (67%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGASEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 346 NAAAKKFDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R IC ILE +Q E G+ +P+ LRK++P E IP+VK P + K++
Sbjct: 406 SATERTICCILENYQREDGLVVPEVLRKYIPG----EPEFIPYVKELPKNSTSQKRK 458
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPIRY G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFEKPQEQLPIRYAGYSSCFRREAGS 284
>gi|444322205|ref|XP_004181758.1| hypothetical protein TBLA_0G03020 [Tetrapisispora blattae CBS 6284]
gi|387514803|emb|CCH62239.1| hypothetical protein TBLA_0G03020 [Tetrapisispora blattae CBS 6284]
Length = 458
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/229 (53%), Positives = 155/229 (67%), Gaps = 17/229 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI+Y+G S+CFR+E GSHG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIKYVGYSSCFRREAGSHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI NSEEFY LG+ YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEAFDMMIANSEEFYQTLGLPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATERALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
+LE +QTE G+ +P+ LRK++P E +P+VK P + KK+
Sbjct: 414 CVLENYQTEDGLIVPEVLRKYIPG----EPEFLPYVKELPKNSTSNKKK 458
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 121/177 (68%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFVLT P ++SW+ D MI NSEEFY LG+ YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVLTEP--EKSWEAFDMMIANSEEFYQTLGLPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C +LE +QTE G+ +P+ LRK++P E +P+VK P + KK+
Sbjct: 406 AATERALCCVLENYQTEDGLIVPEVLRKYIPG----EPEFLPYVKELPKNSTSNKKK 458
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI+Y+G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIKYVGYSSCFRREAGS 284
>gi|281206264|gb|EFA80453.1| seryl-tRNA synthetase [Polysphondylium pallidum PN500]
Length = 454
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 152/226 (67%), Gaps = 19/226 (8%)
Query: 8 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDT 67
VG + E++E KYLIATSEQPI + HR W+ E LP Y G STCFR+E G+HGRD
Sbjct: 236 VGGAQGEENE---KYLIATSEQPISSYHRGEWIEEKDLPKMYSGYSTCFRKEAGAHGRDV 292
Query: 68 RGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHA 127
GIFRVHQFEK+EQFV+T P D SW M ++MI +E FY +LG+ Y+V++IVSGALN+A
Sbjct: 293 WGIFRVHQFEKIEQFVITKPED--SWAMHEQMIATAEAFYQELGLPYQVISIVSGALNNA 350
Query: 128 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACA 178
AAKK DLE WFPG +RELVSCSNC DYQSR L +R G K + +T A
Sbjct: 351 AAKKYDLEGWFPGYNQYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAA 410
Query: 179 TTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
TTRVIC ILE +QTE G+ +P L+ ++ V IPFVK P
Sbjct: 411 TTRVICCILENYQTEGGINVPKVLQPYMGGVEF-----IPFVKPKP 451
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 119/168 (70%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV+T P D SW ++MI +E FY +LG+ Y+V++IVSGALN
Sbjct: 291 DVWGIFRVHQFEKIEQFVITKPED--SWAMHEQMIATAEAFYQELGLPYQVISIVSGALN 348
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE WFPG +RELVSCSNC YQSR L +R G K+ ++ ++VHMLN+T
Sbjct: 349 NAAAKKYDLEGWFPGYNQYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTL 408
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
ATTRVIC ILE +QTE G+ +P L+ ++ V IPFVK P
Sbjct: 409 AATTRVICCILENYQTEGGINVPKVLQPYMGGVEF-----IPFVKPKP 451
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 524 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
VG + E++E KYLIATSEQPI + HR W+ E LP Y G STCFR+E A
Sbjct: 236 VGGAQGEENE---KYLIATSEQPISSYHRGEWIEEKDLPKMYSGYSTCFRKEAGA 287
>gi|358053986|dbj|GAA99881.1| hypothetical protein E5Q_06584 [Mixia osmundae IAM 14324]
Length = 479
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/254 (51%), Positives = 165/254 (64%), Gaps = 24/254 (9%)
Query: 14 EKDEL--DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRG 69
+ DEL DDKYLIATSEQPI A+H D W P+ LPIRY G STCFR+E GS GRDT G
Sbjct: 235 DDDELQEDDKYLIATSEQPISALHADEWFESPKEQLPIRYAGYSTCFRKEAGSGGRDTWG 294
Query: 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
IFRVHQFEK+EQF +T P + SW+M D MIQ+SE+FY L + Y+++ IVSGALN+AAA
Sbjct: 295 IFRVHQFEKIEQFCITEP--EHSWEMFDSMIQHSEDFYQSLKLPYQLIAIVSGALNNAAA 352
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATT 180
KK DLEAWFP GA++ELVS SNC DYQSR L VR G KQ + T CAT
Sbjct: 353 KKYDLEAWFPNQGAYKELVSVSNCTDYQSRALEVRCGLKKQGDTIKKYVHMLNGTLCATE 412
Query: 181 RVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGM 240
R +C I+E +QT GV IP+ L+ Y+ +P+ + P + +K Q
Sbjct: 413 RALCCIVENYQTPEGVNIPEVLQP-----YMQGRTFLPYTRPLP----KVQKALLQLADS 463
Query: 241 KKKLTMSLFSQVGS 254
+KL++S S VG+
Sbjct: 464 LRKLSLSEASGVGT 477
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 110/150 (73%), Gaps = 2/150 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P + SW+ D MIQ+SE+FY L + Y+++ IVSGALN
Sbjct: 291 DTWGIFRVHQFEKIEQFCITEP--EHSWEMFDSMIQHSEDFYQSLKLPYQLIAIVSGALN 348
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP GA++ELVS SNC YQSR L VR G K+ + ++VHMLN T
Sbjct: 349 NAAAKKYDLEAWFPNQGAYKELVSVSNCTDYQSRALEVRCGLKKQGDTIKKYVHMLNGTL 408
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452
CAT R +C I+E +QT GV IP+ L+ ++
Sbjct: 409 CATERALCCIVENYQTPEGVNIPEVLQPYM 438
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 530 EKDEL--DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAGMCRTY 584
+ DEL DDKYLIATSEQPI A+H D W P+ LPIRY G STCFR+E +G T+
Sbjct: 235 DDDELQEDDKYLIATSEQPISALHADEWFESPKEQLPIRYAGYSTCFRKEAGSGGRDTW 293
>gi|145509547|ref|XP_001440712.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407940|emb|CAK73315.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 152/219 (69%), Gaps = 17/219 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIATSEQPI A++R WL LPI+Y G STCFR+E G++G+D GIFRVHQFEK
Sbjct: 238 EDLYLIATSEQPISAMYRKEWLEPKDLPIKYGGSSTCFRKEAGAYGKDVWGIFRVHQFEK 297
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +ESWK DEMI ++F L + YRVVNIVSGALN AAAKK DLEAWF
Sbjct: 298 IEQFVICSP--EESWKFHDEMITAGQDFVKSLELPYRVVNIVSGALNDAAAKKYDLEAWF 355
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVICAILET 189
PG +REL SCSNCLDYQSR L +R+G K+K Y AT CAT R +C ILE
Sbjct: 356 PGYKDYRELQSCSNCLDYQSRALEIRFGAKKTDEKEKKYVHMLNATLCATERTLCCILEN 415
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+QTETGV++P L+ FV + IP+VK P E+
Sbjct: 416 YQTETGVKVPVVLQPFVGKDF------IPYVKPLPKKED 448
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 121/172 (70%), Gaps = 8/172 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV+ SP +ESWK DEMI ++F L + YRVVNIVSGALN
Sbjct: 285 DVWGIFRVHQFEKIEQFVICSP--EESWKFHDEMITAGQDFVKSLELPYRVVNIVSGALN 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPG +REL SCSNCL YQSR L +R+G K ++ ++VHMLNAT
Sbjct: 343 DAAAKKYDLEAWFPGYKDYRELQSCSNCLDYQSRALEIRFGAKKTDEKEKKYVHMLNATL 402
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CAT R +C ILE +QTETGV++P L+ FV + IP+VK P E+
Sbjct: 403 CATERTLCCILENYQTETGVKVPVVLQPFVGKDF------IPYVKPLPKKED 448
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D YLIATSEQPI A++R WL LPI+Y G STCFR+E A
Sbjct: 238 EDLYLIATSEQPISAMYRKEWLEPKDLPIKYGGSSTCFRKEAGA 281
>gi|367013338|ref|XP_003681169.1| hypothetical protein TDEL_0D03740 [Torulaspora delbrueckii]
gi|359748829|emb|CCE91958.1| hypothetical protein TDEL_0D03740 [Torulaspora delbrueckii]
Length = 460
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 156/231 (67%), Gaps = 17/231 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H + W P+ LPIRY G S+CFR+E GSHG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGYSSCFRREAGSHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ + MI NSEEFY L + YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFENMINNSEEFYQSLKLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKK 235
+LE +QT+ G+ +P+ LRK++P E +PF K P + +K++KK
Sbjct: 414 CVLENYQTDEGLIVPEVLRKYIPG----EPEFLPFTKELPKNSTSSKEKKK 460
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 122/179 (68%), Gaps = 6/179 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFVLT P ++SW+ + MI NSEEFY L + YRVV IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVLTEP--EKSWEEFENMINNSEEFYQSLKLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
AT R +C +LE +QT+ G+ +P+ LRK++P E +PF K P + +K++KK
Sbjct: 406 AATQRALCCVLENYQTDEGLIVPEVLRKYIPG----EPEFLPFTKELPKNSTSSKEKKK 460
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRT 583
D D+KYLIATSEQPI A H + W P+ LPIRY G S+CFR+E + G+ R
Sbjct: 236 DGEDEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGYSSCFRREAGSHGKDAWGVFRV 295
Query: 584 YFHVTCAQREGLLSEATSEE----VDQADPFYAHCRL 616
+ Q E + EE ++ ++ FY +L
Sbjct: 296 HAFEKIEQFVLTEPEKSWEEFENMINNSEEFYQSLKL 332
>gi|167392442|ref|XP_001740156.1| seryl-tRNA synthetase [Entamoeba dispar SAW760]
gi|165895834|gb|EDR23423.1| seryl-tRNA synthetase, putative [Entamoeba dispar SAW760]
Length = 453
Score = 243 bits (620), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 160/230 (69%), Gaps = 18/230 (7%)
Query: 17 ELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
ELDD KYLIATSEQP+ A+H W+ LPI+Y+G ST FR+E G+HG+DT GIFRVHQ
Sbjct: 231 ELDDQKYLIATSEQPLTALHAGEWILPKQLPIKYMGFSTNFRKEAGAHGKDTWGIFRVHQ 290
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQF +T P D+SW+M +EMI+N+ +F+ L I YRVVNIVSGALN+AAAKK DLE
Sbjct: 291 FEKIEQFCMTLP--DKSWEMHEEMIKNARDFFESLKIPYRVVNIVSGALNNAAAKKYDLE 348
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
+FPG +RELVSCSNC DYQSR L VR QT +K + +T CAT R +C I
Sbjct: 349 GYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTLCATERALCCI 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
LE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 408 LENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 452
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P D+SW+ +EMI+N+ +F+ L I YRVVNIVSGALN
Sbjct: 281 DTWGIFRVHQFEKIEQFCMTLP--DKSWEMHEEMIKNARDFFESLKIPYRVVNIVSGALN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE +FPG +RELVSCSNC YQSR L VR QT K ++ +VHMLN+T
Sbjct: 339 NAAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 398 CATERALCCILENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 452
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 533 ELDD-KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
ELDD KYLIATSEQP+ A+H W+ LPI+Y+G ST FR+E A
Sbjct: 231 ELDDQKYLIATSEQPLTALHAGEWILPKQLPIKYMGFSTNFRKEAGA 277
>gi|449546034|gb|EMD37004.1| hypothetical protein CERSUDRAFT_114905 [Ceriporiopsis subvermispora
B]
Length = 452
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 148/217 (68%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI H D W PE LP++Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 235 DEKYLIATSEQPISTYHSDEWFDSPETQLPVQYAGYSTCFRKEAGSAGRDMWGIFRVHQF 294
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P ++SW+M D M+ NSE FY LGI YRVV IVSGALN AA++K DLEA
Sbjct: 295 EKVEQFCITEP--EKSWEMFDTMVANSEAFYQSLGIPYRVVAIVSGALNLAASQKYDLEA 352
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAIL 187
WFP GA++ELVSCSNC DYQSRRL VR GQ + K+Y T CAT R +C I+
Sbjct: 353 WFPFQGAYKELVSCSNCTDYQSRRLEVRCGQKTKDQARKVYVHMLNGTLCATERALCCIV 412
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+ IP+ LR ++ +P+VK P
Sbjct: 413 ENYQTPEGLVIPEVLRPYMQGREF-----LPWVKELP 444
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 116/171 (67%), Gaps = 7/171 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQF +T P ++SW+ D M+ NSE FY LGI YRVV IVSG
Sbjct: 281 AGRDMWGIFRVHQFEKVEQFCITEP--EKSWEMFDTMVANSEAFYQSLGIPYRVVAIVSG 338
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AA++K DLEAWFP GA++ELVSCSNC YQSRRL VR GQ K + +VHMLN
Sbjct: 339 ALNLAASQKYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGQKTKDQARKVYVHMLN 398
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
T CAT R +C I+E +QT G+ IP+ LR ++ +P+VK P
Sbjct: 399 GTLCATERALCCIVENYQTPEGLVIPEVLRPYMQGREF-----LPWVKELP 444
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI H D W PE LP++Y G STCFR+E +
Sbjct: 235 DEKYLIATSEQPISTYHSDEWFDSPETQLPVQYAGYSTCFRKEAGSA 281
>gi|366988435|ref|XP_003673984.1| hypothetical protein NCAS_0A10450 [Naumovozyma castellii CBS 4309]
gi|342299847|emb|CCC67603.1| hypothetical protein NCAS_0A10450 [Naumovozyma castellii CBS 4309]
Length = 459
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 153/226 (67%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E GSHG+D GIFRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGKDAWGIFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P + SW+ D+MI +SEEFY L + YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFVLTEPEN--SWEEFDKMIDHSEEFYQSLKLPYRVVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C IL
Sbjct: 357 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLSATERALCCIL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QTE G+ +P+ LR+++P E +PFVK P + KK+
Sbjct: 417 ENYQTEDGLVVPEVLRRYIPG----EPEFLPFVKELPKNSTSNKKK 458
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 120/177 (67%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P + SW+ D+MI +SEEFY L + YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEPEN--SWEEFDKMIDHSEEFYQSLKLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C ILE +QTE G+ +P+ LR+++P E +PFVK P + KK+
Sbjct: 406 SATERALCCILENYQTEDGLVVPEVLRRYIPG----EPEFLPFVKELPKNSTSNKKK 458
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRTYFH 586
D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E + G+ R +
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGKDAWGIFRVHAF 298
Query: 587 VTCAQREGLLSEATSEE----VDQADPFYAHCRL 616
Q E + EE +D ++ FY +L
Sbjct: 299 EKIEQFVLTEPENSWEEFDKMIDHSEEFYQSLKL 332
>gi|255712569|ref|XP_002552567.1| KLTH0C07898p [Lachancea thermotolerans]
gi|238933946|emb|CAR22129.1| KLTH0C07898p [Lachancea thermotolerans CBS 6340]
Length = 461
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 151/226 (66%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E G+HG+D G+FRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYAGYSSCFRREAGAHGKDAWGVFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ D MI SEEFY L + YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFVLTEP--EKSWEEFDRMIATSEEFYQSLNLPYRVVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K +K Y +T CAT R +C +L
Sbjct: 357 WFPYQQEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALCCVL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QTE G+ +P+ LRK++P E IPF K P + KK+
Sbjct: 417 ENYQTEEGLVVPEVLRKYIPG----EPEFIPFTKELPKNSTSNKKK 458
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 119/177 (67%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFVLT P ++SW+ D MI SEEFY L + YRVV IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVLTEP--EKSWEEFDRMIATSEEFYQSLNLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQQEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C +LE +QTE G+ +P+ LRK++P E IPF K P + KK+
Sbjct: 406 CATQRALCCVLENYQTEEGLVVPEVLRKYIPG----EPEFIPFTKELPKNSTSNKKK 458
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E A
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYAGYSSCFRREAGA 284
>gi|378731062|gb|EHY57521.1| seryl-tRNA synthetase [Exophiala dermatitidis NIH/UT8656]
Length = 487
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/234 (50%), Positives = 155/234 (66%), Gaps = 15/234 (6%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E + +DKYLIATSEQP+ A+ D WL E LP+++ G S+CFR+E GSHGRD G+FR+
Sbjct: 228 EGADAEDKYLIATSEQPLSAMFADEWLTEKDLPMKFAGYSSCFRKEAGSHGRDAWGLFRI 287
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEK+EQF+ P +ESW+ L++M + +E FY LG+ YRVV IVSGALN+AAAKK D
Sbjct: 288 HQFEKIEQFLFVKP--EESWQALEDMRETAEAFYQSLGLPYRVVVIVSGALNNAAAKKYD 345
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA----------TACATTRVI 183
LEAWFP G ++ELVSCSNC DYQ+R L +RYGQ K I A T CAT R +
Sbjct: 346 LEAWFPYQGEYKELVSCSNCTDYQTRELEIRYGQKKGAIDARKSYVHALNGTLCATERTL 405
Query: 184 CAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQK 237
C +LE +Q E G +P+ LR ++P IP+ K P + K +++ K
Sbjct: 406 CCLLENYQKEDGFEVPEALRPYMPP---GTPDIIPYTKELPKESTSVKAKQQPK 456
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 6/182 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FR+HQFEK+EQF+ P +ESW+ L++M + +E FY LG+ YRVV IVSGALN
Sbjct: 280 DAWGLFRIHQFEKIEQFLFVKP--EESWQALEDMRETAEAFYQSLGLPYRVVVIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTK-KMNEKIEFVHMLNAT 421
+AAAKK DLEAWFP G ++ELVSCSNC YQ+R L +RYGQ K ++ + +VH LN T
Sbjct: 338 NAAAKKYDLEAWFPYQGEYKELVSCSNCTDYQTRELEIRYGQKKGAIDARKSYVHALNGT 397
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
CAT R +C +LE +Q E G +P+ LR ++P IP+ K P + K +++
Sbjct: 398 LCATERTLCCLLENYQKEDGFEVPEALRPYMPP---GTPDIIPYTKELPKESTSVKAKQQ 454
Query: 482 QK 483
K
Sbjct: 455 PK 456
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E + +DKYLIATSEQP+ A+ D WL E LP+++ G S+CFR+E
Sbjct: 228 EGADAEDKYLIATSEQPLSAMFADEWLTEKDLPMKFAGYSSCFRKEA 274
>gi|50292585|ref|XP_448725.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528037|emb|CAG61688.1| unnamed protein product [Candida glabrata]
Length = 458
Score = 242 bits (618), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 122/229 (53%), Positives = 153/229 (66%), Gaps = 17/229 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E GSHG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQF +T P ++SW+ D MI NSEEFY L + YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFCITEP--EKSWEEFDRMIANSEEFYQSLKLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G ++K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRSGIKKMNDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
+LE +QTE G+ +P+ LRK++P E +PFVK P + KK+
Sbjct: 414 CVLENYQTEDGLIVPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 458
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 122/178 (68%), Gaps = 8/178 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQF +T P ++SW+ D MI NSEEFY L + YRVV IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFCITEP--EKSWEEFDRMIANSEEFYQSLKLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK-IEFVHMLNAT 421
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G KKMN++ ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRSG-IKKMNDREKKYVHCLNST 404
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C +LE +QTE G+ +P+ LRK++P E +PFVK P + KK+
Sbjct: 405 LAATQRALCCVLENYQTEDGLIVPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 458
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGS 284
>gi|169862181|ref|XP_001837721.1| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
gi|116501170|gb|EAU84065.1| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
Length = 453
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 158/229 (68%), Gaps = 22/229 (9%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H D W PE LPI+Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 235 DEKYLIATSEQPISAFHSDEWFESPETQLPIKYAGYSTCFRKEAGSAGRDMWGIFRVHQF 294
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P ++SW+MLD M+ NSEEFY LG+ YRVV IVSGALN AAA+K DLEA
Sbjct: 295 EKVEQFCITDP--EKSWEMLDHMLNNSEEFYQSLGLRYRVVAIVSGALNLAAAQKYDLEA 352
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG-QTK---QKIY-----ATACATTRVICAIL 187
+FP A++ELVSCSNC DYQSRRL +R G +TK +K+Y T CAT R +C ++
Sbjct: 353 YFPFQRAYKELVSCSNCTDYQSRRLEIRCGLRTKDQTRKVYVHMLNGTLCATERALCCLV 412
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
E +QT G+ IP+ LR Y+ +PFVK P + +QKKQ
Sbjct: 413 ENYQTPEGLVIPEPLRP-----YMQGRDFLPFVKELP----KGLQQKKQ 452
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 122/183 (66%), Gaps = 11/183 (6%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQF +T P ++SW+ LD M+ NSEEFY LG+ YRVV IVSG
Sbjct: 281 AGRDMWGIFRVHQFEKVEQFCITDP--EKSWEMLDHMLNNSEEFYQSLGLRYRVVAIVSG 338
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAA+K DLEA+FP A++ELVSCSNC YQSRRL +R G K + +VHMLN
Sbjct: 339 ALNLAAAQKYDLEAYFPFQRAYKELVSCSNCTDYQSRRLEIRCGLRTKDQTRKVYVHMLN 398
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
T CAT R +C ++E +QT G+ IP+ LR Y+ +PFVK P + +Q
Sbjct: 399 GTLCATERALCCLVENYQTPEGLVIPEPLRP-----YMQGRDFLPFVKELP----KGLQQ 449
Query: 480 KKQ 482
KKQ
Sbjct: 450 KKQ 452
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI A H D W PE LPI+Y G STCFR+E +
Sbjct: 235 DEKYLIATSEQPISAFHSDEWFESPETQLPIKYAGYSTCFRKEAGSA 281
>gi|366998363|ref|XP_003683918.1| hypothetical protein TPHA_0A04080 [Tetrapisispora phaffii CBS 4417]
gi|357522213|emb|CCE61484.1| hypothetical protein TPHA_0A04080 [Tetrapisispora phaffii CBS 4417]
Length = 458
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 153/226 (67%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E GSHG+D G+FRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGKDAWGVFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFV+T P ++SW+ D+MI SEEFY L + YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFVITEP--EKSWEEFDKMIDASEEFYQSLKLPYRVVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C +L
Sbjct: 357 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMSEREKKYVHCLNSTLAATQRALCCVL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QTE G+ IP+ LRK++P E +PFVK P + KK+
Sbjct: 417 ENYQTEDGLVIPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 458
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 123/178 (69%), Gaps = 8/178 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFV+T P ++SW+ D+MI SEEFY L + YRVV IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVITEP--EKSWEEFDKMIDASEEFYQSLKLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK-IEFVHMLNAT 421
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G KKM+E+ ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCG-IKKMSEREKKYVHCLNST 404
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C +LE +QTE G+ IP+ LRK++P E +PFVK P + KK+
Sbjct: 405 LAATQRALCCVLENYQTEDGLVIPEVLRKYIPG----EPEFLPFVKELPKNSTSNKKK 458
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRTYFH 586
D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E + G+ R +
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGKDAWGVFRVHAF 298
Query: 587 VTCAQREGLLSEATSEE----VDQADPFYAHCRL 616
Q E + EE +D ++ FY +L
Sbjct: 299 EKIEQFVITEPEKSWEEFDKMIDASEEFYQSLKL 332
>gi|320588821|gb|EFX01289.1| seryl-tRNA synthetase [Grosmannia clavigera kw1407]
Length = 493
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/229 (55%), Positives = 151/229 (65%), Gaps = 16/229 (6%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
+KYLIA SEQPI A H WL A +PI+Y G STCFR+E GSHG+D G FRVHQFEKV
Sbjct: 243 EKYLIA-SEQPISAYHAGQWLQPAEMPIKYAGFSTCFRREAGSHGKDAWGTFRVHQFEKV 301
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQFVL P ++SW+M D MI NSEEF LG+ YRV+ IVSGA N AA+KK DLEAWFP
Sbjct: 302 EQFVLCDP--EKSWEMFDAMIANSEEFCQALGLPYRVIAIVSGAFNQAASKKFDLEAWFP 359
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYG---QTKQK------IYATACATTRVICAILETH 190
++ELVSCSNC D+QSR L +RYG QT K + +T AT+R +CAILE
Sbjct: 360 YQAEYKELVSCSNCTDFQSRALDIRYGAKTQTDAKKKYVHCLNSTLTATSRTMCAILENF 419
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEG 239
QT GVRIP+ LRK++P +PF K P D K + K +G
Sbjct: 420 QTPEGVRIPEPLRKYLPGA----PDFLPFTKELPKDSTSQKAKAKSDKG 464
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 120/183 (65%), Gaps = 6/183 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G FRVHQFEKVEQFVL P ++SW+ D MI NSEEF LG+ YRV+ IVSGA N
Sbjct: 288 DAWGTFRVHQFEKVEQFVLCDP--EKSWEMFDAMIANSEEFCQALGLPYRVIAIVSGAFN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+KK DLEAWFP ++ELVSCSNC +QSR L +RYG + + K ++VH LN+T
Sbjct: 346 QAASKKFDLEAWFPYQAEYKELVSCSNCTDFQSRALDIRYGAKTQTDAKKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
AT+R +CAILE QT GVRIP+ LRK++P +PF K P D K + K
Sbjct: 406 TATSRTMCAILENFQTPEGVRIPEPLRKYLPGA----PDFLPFTKELPKDSTSQKAKAKS 461
Query: 483 KEG 485
+G
Sbjct: 462 DKG 464
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+KYLIA SEQPI A H WL A +PI+Y G STCFR+E
Sbjct: 243 EKYLIA-SEQPISAYHAGQWLQPAEMPIKYAGFSTCFRREA 282
>gi|162460445|ref|NP_001105110.1| seryl-tRNA synthetase1 [Zea mays]
gi|3319776|emb|CAA07600.1| seryl-tRNA synthetase [Zea mays]
Length = 457
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 151/217 (69%), Gaps = 16/217 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DKYLIATSEQP+CA H + A LPI+Y G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 229 EDKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 288
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+ ++SW++ +EM++NSE+FY ++G+ Y+VV+IVSGALN AAAKK DLEAWF
Sbjct: 289 IEQFCITSPNGNDSWEIHEEMLKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYDLEAWF 348
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P S FRELVSCSNC D+ RRL + YGQ K + +T AT R +C ILE
Sbjct: 349 PASKTFRELVSCSNCTDFSQRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILEN 408
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
Q E G R+ L+ ++ + +PF + P+D
Sbjct: 409 FQKEDGRRVKGTLQPYMGGIEF-----LPFKQ--PLD 438
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 113/153 (73%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+ ++SW+ +EM++NSE+FY ++G+ Y+VV+IVSGALN
Sbjct: 276 DTAGIFRVHQFEKIEQFCITSPNGNDSWEIHEEMLKNSEDFYKEIGLPYQVVSIVSGALN 335
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S FRELVSCSNC + RRL + YGQ K + +FVHMLN+T
Sbjct: 336 DAAAKKYDLEAWFPASKTFRELVSCSNCTDFSQRRLGIGYGQKKNDEQSKQFVHMLNSTL 395
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
AT R +C ILE Q E G R+ L+ ++ +
Sbjct: 396 TATERTLCCILENFQKEDGRRVKGTLQPYMGGI 428
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+DKYLIATSEQP+CA H + A LPI+Y G STCFR+E
Sbjct: 229 EDKYLIATSEQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEA 270
>gi|68471585|ref|XP_720099.1| potential serine tRNA synthetase [Candida albicans SC5314]
gi|20140251|sp|Q9HGT6.1|SYSC_CANAL RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|9931532|gb|AAG02209.1|AF290915_1 seryl-tRNA synthetase [Candida albicans]
gi|46441951|gb|EAL01244.1| potential serine tRNA synthetase [Candida albicans SC5314]
gi|238880695|gb|EEQ44333.1| seryl-tRNA synthetase [Candida albicans WO-1]
Length = 462
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 150/230 (65%), Gaps = 17/230 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G +Q + +T AT R IC
Sbjct: 354 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTIC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 414 CILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ ++ ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 406 SATERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGS 284
>gi|255075441|ref|XP_002501395.1| predicted protein [Micromonas sp. RCC299]
gi|226516659|gb|ACO62653.1| predicted protein [Micromonas sp. RCC299]
Length = 482
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 145/218 (66%), Gaps = 15/218 (6%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E D+ +DKYLIATSEQ C+ R W+ LPIR G STCFR+E GSHGRDT GIFRV
Sbjct: 227 EGDDKEDKYLIATSEQTCCSFLRKRWIQPKELPIRLAGYSTCFRKEAGSHGRDTLGIFRV 286
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEKVEQFV SP DESW+ ++ MI NSE FY LGI Y+VVNIVSG LN AAAKK D
Sbjct: 287 HQFEKVEQFVAVSPDGDESWQEMERMIGNSEAFYQSLGIPYQVVNIVSGELNDAAAKKYD 346
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT-----KQKIY-----ATACATTRVI 183
LEAWFP S +RELVSCSNC D+QSRRL +R G K+K Y +T AT R +
Sbjct: 347 LEAWFPSSKTWRELVSCSNCTDFQSRRLEIRCGAAQKGPEKKKSYCHLLNSTLTATERTL 406
Query: 184 CAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
C +LE QT G +P LR ++ + IPFVK
Sbjct: 407 CCVLENWQTPEGFVVPPALRPWMQGIEF-----IPFVK 439
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/166 (57%), Positives = 114/166 (68%), Gaps = 6/166 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFV SP DESW+ ++ MI NSE FY LGI Y+VVNIVSG LN
Sbjct: 279 DTLGIFRVHQFEKVEQFVAVSPDGDESWQEMERMIGNSEAFYQSLGIPYQVVNIVSGELN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE-FVHMLNAT 421
AAAKK DLEAWFP S +RELVSCSNC +QSRRL +R G +K EK + + H+LN+T
Sbjct: 339 DAAAKKYDLEAWFPSSKTWRELVSCSNCTDFQSRRLEIRCGAAQKGPEKKKSYCHLLNST 398
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
AT R +C +LE QT G +P LR ++ + IPFVK
Sbjct: 399 LTATERTLCCVLENWQTPEGFVVPPALRPWMQGIEF-----IPFVK 439
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D+ +DKYLIATSEQ C+ R W+ LPIR G STCFR+E
Sbjct: 227 EGDDKEDKYLIATSEQTCCSFLRKRWIQPKELPIRLAGYSTCFRKEA 273
>gi|164656381|ref|XP_001729318.1| hypothetical protein MGL_3353 [Malassezia globosa CBS 7966]
gi|159103209|gb|EDP42104.1| hypothetical protein MGL_3353 [Malassezia globosa CBS 7966]
Length = 440
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 143/217 (65%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A H + W P LPI+Y G STCFR+E GSHG+DT GIFRVHQF
Sbjct: 222 DDKYLIATSEQPISAFHSNEWFDRPAEQLPIKYAGYSTCFRKEAGSHGKDTWGIFRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +T P SW+MLD M+ NSEEFY L I YRVV IVSGALN+AAA K DLEA
Sbjct: 282 EKIEQFCITDPAS--SWEMLDHMLANSEEFYQSLQIPYRVVAIVSGALNNAAAMKYDLEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP G +ELVSCSNC DYQSRRL VR G KQ + T CAT R +C ++
Sbjct: 340 WFPFQGEHKELVSCSNCTDYQSRRLEVRCGMKKQGDTKKQYCHMLNGTLCATERALCCLV 399
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E QT G+RIP L+ Y+ +PF K P
Sbjct: 400 ENWQTSEGLRIPPVLQP-----YMQGRDFLPFTKDLP 431
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 112/168 (66%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P SW+ LD M+ NSEEFY L I YRVV IVSGALN
Sbjct: 271 DTWGIFRVHQFEKIEQFCITDPAS--SWEMLDHMLANSEEFYQSLQIPYRVVAIVSGALN 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFP G +ELVSCSNC YQSRRL VR G K+ + K ++ HMLN T
Sbjct: 329 NAAAMKYDLEAWFPFQGEHKELVSCSNCTDYQSRRLEVRCGMKKQGDTKKQYCHMLNGTL 388
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
CAT R +C ++E QT G+RIP L+ Y+ +PF K P
Sbjct: 389 CATERALCCLVENWQTSEGLRIPPVLQP-----YMQGRDFLPFTKDLP 431
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
DDKYLIATSEQPI A H + W P LPI+Y G STCFR+E
Sbjct: 222 DDKYLIATSEQPISAFHSNEWFDRPAEQLPIKYAGYSTCFRKEA 265
>gi|448516106|ref|XP_003867492.1| Ses1 seryl-tRNA synthetase [Candida orthopsilosis Co 90-125]
gi|380351831|emb|CCG22055.1| Ses1 seryl-tRNA synthetase [Candida orthopsilosis]
Length = 458
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 154/229 (67%), Gaps = 17/229 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPIRY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFEKPQEQLPIRYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGASEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R +C
Sbjct: 354 LEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATERTVC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
ILE +Q E G+ +P+ LR+++P E IP+VK P + K++
Sbjct: 414 CILENYQREDGLVVPEVLRRYIPG----EPEFIPYVKELPKNSTSQKRK 458
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 119/177 (67%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGASEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C ILE +Q E G+ +P+ LR+++P E IP+VK P + K++
Sbjct: 406 SATERTVCCILENYQREDGLVVPEVLRRYIPG----EPEFIPYVKELPKNSTSQKRK 458
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPIRY G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFEKPQEQLPIRYAGYSSCFRREAGS 284
>gi|241952971|ref|XP_002419207.1| class II aminoacyl-tRNA synthetase, putative; cytosolic seryl-tRNA
synthetase, putative [Candida dubliniensis CD36]
gi|223642547|emb|CAX42796.1| class II aminoacyl-tRNA synthetase, putative [Candida dubliniensis
CD36]
Length = 462
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 150/230 (65%), Gaps = 17/230 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G +Q + +T AT R IC
Sbjct: 354 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTIC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 414 CILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ ++ ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 406 SATERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGS 284
>gi|68471848|ref|XP_719967.1| potential serine tRNA synthetase [Candida albicans SC5314]
gi|46441814|gb|EAL01108.1| potential serine tRNA synthetase [Candida albicans SC5314]
Length = 458
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 150/230 (65%), Gaps = 17/230 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 232 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRV 291
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 292 HAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 349
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G +Q + +T AT R IC
Sbjct: 350 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTIC 409
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 410 CILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 455
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 284 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELN 341
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ ++ ++VH LN+T
Sbjct: 342 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTL 401
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 402 SATERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 455
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E +
Sbjct: 232 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGS 280
>gi|392590235|gb|EIW79564.1| serine-tRNA ligase [Coniophora puteana RWD-64-598 SS2]
Length = 452
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 143/199 (71%), Gaps = 13/199 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H+D W P+ LPI Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 235 DEKYLIATSEQPISAFHQDEWFEDPKTQLPIYYAGYSTCFRKEAGSAGRDMWGIFRVHQF 294
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV+T+P D SW+ D M+ NSE FY LG+ YRVV IVSGALN AAAKK DLEA
Sbjct: 295 EKVEQFVITAP--DASWEAFDTMLGNSEAFYQSLGLPYRVVAIVSGALNLAAAKKCDLEA 352
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSRRL VR G ++K+Y T CAT R +C ++
Sbjct: 353 WFPFQGDYKELVSCSNCTDYQSRRLEVRCGLRSKDQQRKVYVHMLNGTMCATERALCCLV 412
Query: 188 ETHQTETGVRIPDCLRKFV 206
E +QT G+R+P+ LR ++
Sbjct: 413 ENYQTPEGLRVPEVLRPYM 431
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 111/153 (72%), Gaps = 2/153 (1%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQFV+T+P D SW+ D M+ NSE FY LG+ YRVV IVSG
Sbjct: 281 AGRDMWGIFRVHQFEKVEQFVITAP--DASWEAFDTMLGNSEAFYQSLGLPYRVVAIVSG 338
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAAKK DLEAWFP G ++ELVSCSNC YQSRRL VR G K ++ +VHMLN
Sbjct: 339 ALNLAAAKKCDLEAWFPFQGDYKELVSCSNCTDYQSRRLEVRCGLRSKDQQRKVYVHMLN 398
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFV 452
T CAT R +C ++E +QT G+R+P+ LR ++
Sbjct: 399 GTMCATERALCCLVENYQTPEGLRVPEVLRPYM 431
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI A H+D W P+ LPI Y G STCFR+E +
Sbjct: 235 DEKYLIATSEQPISAFHQDEWFEDPKTQLPIYYAGYSTCFRKEAGSA 281
>gi|363753040|ref|XP_003646736.1| hypothetical protein Ecym_5142 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890372|gb|AET39919.1| hypothetical protein Ecym_5142 [Eremothecium cymbalariae
DBVPG#7215]
Length = 459
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 152/229 (66%), Gaps = 17/229 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LP+RY+G S+CFR+E G+HG+D G+FRV
Sbjct: 236 DGDDEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGAHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQF +T P + SW+ D MI SEEFY LG+ YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFCITEPEN--SWEEFDRMIGASEEFYQSLGVPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T CAT R +C
Sbjct: 354 LEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
ILE +QTE G+ +P+ LRK++P E IPF K P + K++
Sbjct: 414 CILENYQTEEGLVVPEVLRKYIPG----EPSFIPFTKELPKNSTSNKRK 458
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 118/177 (66%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQF +T P + SW+ D MI SEEFY LG+ YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFCITEPEN--SWEEFDRMIGASEEFYQSLGVPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C ILE +QTE G+ +P+ LRK++P E IPF K P + K++
Sbjct: 406 CATQRALCCILENYQTEEGLVVPEVLRKYIPG----EPSFIPFTKELPKNSTSNKRK 458
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LP+RY+G S+CFR+E A
Sbjct: 236 DGDDEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGA 284
>gi|390605088|gb|EIN14479.1| seryl-tRNA synthetase [Punctularia strigosozonata HHB-11173 SS5]
Length = 451
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 20/218 (9%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H D W PE LPI+Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 234 DEKYLIATSEQPISAFHSDEWFESPEKQLPIQYAGYSTCFRKEAGSAGRDMWGIFRVHQF 293
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P ++SW+M D MI NSE FY LGI YRVV IVSGALN AA++K DLEA
Sbjct: 294 EKVEQFCITEP--EKSWEMFDTMIANSEAFYQSLGIPYRVVAIVSGALNLAASQKFDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY-----ATACATTRVICAI 186
WFP GA++ELVSCSNC DYQ+RRL VR G QT+ K+Y T CAT R +C +
Sbjct: 352 WFPFQGAYKELVSCSNCTDYQARRLEVRCGLKAKDQTR-KVYVHMLNGTLCATERALCCL 410
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
+E +QT G+ IP+ LR Y+ +P+VK P
Sbjct: 411 VENYQTPEGLVIPEPLRP-----YMQGREFLPWVKELP 443
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 115/171 (67%), Gaps = 7/171 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQF +T P ++SW+ D MI NSE FY LGI YRVV IVSG
Sbjct: 280 AGRDMWGIFRVHQFEKVEQFCITEP--EKSWEMFDTMIANSEAFYQSLGIPYRVVAIVSG 337
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AA++K DLEAWFP GA++ELVSCSNC YQ+RRL VR G K + +VHMLN
Sbjct: 338 ALNLAASQKFDLEAWFPFQGAYKELVSCSNCTDYQARRLEVRCGLKAKDQTRKVYVHMLN 397
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
T CAT R +C ++E +QT G+ IP+ LR Y+ +P+VK P
Sbjct: 398 GTLCATERALCCLVENYQTPEGLVIPEPLRP-----YMQGREFLPWVKELP 443
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI A H D W PE LPI+Y G STCFR+E +
Sbjct: 234 DEKYLIATSEQPISAFHSDEWFESPEKQLPIQYAGYSTCFRKEAGSA 280
>gi|348688490|gb|EGZ28304.1| hypothetical protein PHYSODRAFT_537011 [Phytophthora sojae]
Length = 454
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 157/234 (67%), Gaps = 16/234 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSEQPIC HR W+ E+SLP+RY G STCFR+E GSHG+DT GIFRVHQF+K
Sbjct: 228 DEKYLIATSEQPICGYHRGEWITESSLPLRYGGFSTCFRKEAGSHGKDTWGIFRVHQFDK 287
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF +T P + S M +EM++++EEFY L + YRVVNIVSG LN+AA KK DLEAWF
Sbjct: 288 VEQFCITDP--ESSVAMHEEMLRHAEEFYQSLNLPYRVVNIVSGELNNAAVKKYDLEAWF 345
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P +RELVS SNC D+QSR + +R G K+ + +T CA+TR +C ILE
Sbjct: 346 PAYKEYRELVSASNCTDFQSRAMEIRCGVKKENQREKKYVHMLNSTLCASTRTVCCILEN 405
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
+Q E GV++P+ L F+ V +PF + ++ + K QK K+ K+
Sbjct: 406 YQDENGVKVPEVLVPFMGGVTY-----LPFTRDVKVNVQAVKMQKAAKKKSGKQ 454
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 123/187 (65%), Gaps = 7/187 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+KVEQF +T P + S +EM++++EEFY L + YRVVNIVSG LN
Sbjct: 275 DTWGIFRVHQFDKVEQFCITDP--ESSVAMHEEMLRHAEEFYQSLNLPYRVVNIVSGELN 332
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA KK DLEAWFP +RELVS SNC +QSR + +R G K+ + ++VHMLN+T
Sbjct: 333 NAAVKKYDLEAWFPAYKEYRELVSASNCTDFQSRAMEIRCGVKKENQREKKYVHMLNSTL 392
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA+TR +C ILE +Q E GV++P+ L F+ V +PF + ++ + K QK
Sbjct: 393 CASTRTVCCILENYQDENGVKVPEVLVPFMGGVTY-----LPFTRDVKVNVQAVKMQKAA 447
Query: 483 KEGMKKK 489
K+ K+
Sbjct: 448 KKKSGKQ 454
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+KYLIATSEQPIC HR W+ E+SLP+RY G STCFR+E
Sbjct: 228 DEKYLIATSEQPICGYHRGEWITESSLPLRYGGFSTCFRKEA 269
>gi|298709359|emb|CBJ31293.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 689
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 147/210 (70%), Gaps = 10/210 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQPICA H+ WL E+ LP+RY GVSTCFR+E G+HG+DT GIFRVHQFEK
Sbjct: 227 EEKYLIATSEQPICAFHKGEWLGESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF + ++S M EM + SEEFY LGI+YRVVNIVSG LN+AA KK DLEAWF
Sbjct: 287 VEQFCICEGDLEKSAAMQVEMSKASEEFYQSLGISYRVVNIVSGELNNAAIKKYDLEAWF 346
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILET 189
P FRELVSCSNC DYQSR + VR G K + +T CATTR + ILE
Sbjct: 347 PAYEEFRELVSCSNCTDYQSRGMEVRSGHKKMGQVEKKFVHMLNSTLCATTRTMSCILEN 406
Query: 190 HQTETGVRIPDCLRKFVPAV-YLNEAGEIP 218
+QT TGV +P+ L F+ + +L+ E+P
Sbjct: 407 YQTPTGVTVPEVLVPFMGGITFLDYVKELP 436
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 115/179 (64%), Gaps = 5/179 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF + ++S EM + SEEFY LGI+YRVVNIVSG LN
Sbjct: 274 DTWGIFRVHQFEKVEQFCICEGDLEKSAAMQVEMSKASEEFYQSLGISYRVVNIVSGELN 333
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA KK DLEAWFP FRELVSCSNC YQSR + VR G K + +FVHMLN+T
Sbjct: 334 NAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRGMEVRSGHKKMGQVEKKFVHMLNSTL 393
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
CATTR + ILE +QT TGV +P+ L F+ + + +VK P + E K K
Sbjct: 394 CATTRTMSCILENYQTPTGVTVPEVLVPFMGGITF-----LDYVKELPKGKREAKGATK 447
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 46/172 (26%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREG 594
++KYLIATSEQPICA H+ WL E+ LP+RY GVSTCFR+E A T+ G
Sbjct: 227 EEKYLIATSEQPICAFHKGEWLGESELPLRYGGVSTCFRKEAGAHGKDTW---------G 277
Query: 595 LLSEATSEEVDQADPFYAHCRLHADKLEDFSKFSKILVCCVCLGERSDDVNEIVECD--- 651
+ R+H +F K+ C+C G+ VE
Sbjct: 278 IF------------------RVH--------QFEKVEQFCICEGDLEKSAAMQVEMSKAS 311
Query: 652 -----SCGVTVHEVKIQQEFLAIKFLIRY-LLFWFQLEDFSKFSKILVCCVC 697
S G++ V I L + +Y L WF + +F +++ C C
Sbjct: 312 EEFYQSLGISYRVVNIVSGELNNAAIKKYDLEAWFPA--YEEFRELVSCSNC 361
>gi|145494412|ref|XP_001433200.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400317|emb|CAK65803.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 149/219 (68%), Gaps = 17/219 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIATSEQPI A++R WL LPI+Y G STCFR+E G+HG+D GIFRVHQFEK
Sbjct: 238 EDLYLIATSEQPISAMYRKEWLEAKDLPIKYGGSSTCFRKEAGAHGKDVWGIFRVHQFEK 297
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ P +ESWK +EMI ++F L + YRVVNIVSGALN AAAKK DLEAWF
Sbjct: 298 IEQFVICPP--EESWKFHEEMITAGQDFVKSLELPYRVVNIVSGALNDAAAKKYDLEAWF 355
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILET 189
PG +REL SCSNCLDYQSR L +RYG K + AT CAT R +C ILE
Sbjct: 356 PGYKDYRELQSCSNCLDYQSRALEIRYGAKKADEKEKKYVHMLNATLCATERTLCCILEN 415
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
+QTETGV++P L+ +V + IP+VK P E+
Sbjct: 416 YQTETGVKVPAVLQPYVGKDF------IPYVKPLPKKED 448
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 120/172 (69%), Gaps = 8/172 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV+ P +ESWK +EMI ++F L + YRVVNIVSGALN
Sbjct: 285 DVWGIFRVHQFEKIEQFVICPP--EESWKFHEEMITAGQDFVKSLELPYRVVNIVSGALN 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPG +REL SCSNCL YQSR L +RYG K ++ ++VHMLNAT
Sbjct: 343 DAAAKKYDLEAWFPGYKDYRELQSCSNCLDYQSRALEIRYGAKKADEKEKKYVHMLNATL 402
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
CAT R +C ILE +QTETGV++P L+ +V + IP+VK P E+
Sbjct: 403 CATERTLCCILENYQTETGVKVPAVLQPYVGKDF------IPYVKPLPKKED 448
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D YLIATSEQPI A++R WL LPI+Y G STCFR+E A
Sbjct: 238 EDLYLIATSEQPISAMYRKEWLEAKDLPIKYGGSSTCFRKEAGA 281
>gi|325190580|emb|CCA25077.1| unnamed protein product [Albugo laibachii Nc14]
Length = 454
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/223 (53%), Positives = 155/223 (69%), Gaps = 23/223 (10%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSEQP+C H+ W+ E+SLP+RY G+STCFR+E GSHG+DT GIFRVHQF+K
Sbjct: 228 DEKYLIATSEQPLCGYHKGDWIQESSLPLRYGGLSTCFRKESGSHGKDTWGIFRVHQFDK 287
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF +T P + S +M +EM++++E+FY L ++YRVVNIVSG LN+AA KK DLEAWF
Sbjct: 288 VEQFCITEPEN--STEMHEEMLKHAEDFYQSLNLSYRVVNIVSGELNNAAVKKYDLEAWF 345
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P +RELVSCSNC DYQ+R + +R G K+ + +T CA+TR +C ILE
Sbjct: 346 PAYNEYRELVSCSNCTDYQARAMEIRCGIKKENQREKKYVHMLNSTLCASTRTVCCILEN 405
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKK 232
+Q E GV++P L F+ V IPFV+ ETKK
Sbjct: 406 NQDENGVKVPHVLVPFMGGVTF-----IPFVR-------ETKK 436
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 120/176 (68%), Gaps = 14/176 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+KVEQF +T P + S + +EM++++E+FY L ++YRVVNIVSG LN
Sbjct: 275 DTWGIFRVHQFDKVEQFCITEPEN--STEMHEEMLKHAEDFYQSLNLSYRVVNIVSGELN 332
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA KK DLEAWFP +RELVSCSNC YQ+R + +R G K+ + ++VHMLN+T
Sbjct: 333 NAAVKKYDLEAWFPAYNEYRELVSCSNCTDYQARAMEIRCGIKKENQREKKYVHMLNSTL 392
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
CA+TR +C ILE +Q E GV++P L F+ V IPFV+ ETKK
Sbjct: 393 CASTRTVCCILENNQDENGVKVPHVLVPFMGGVTF-----IPFVR-------ETKK 436
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 35/41 (85%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
D+KYLIATSEQP+C H+ W+ E+SLP+RY G+STCFR+E
Sbjct: 228 DEKYLIATSEQPLCGYHKGDWIQESSLPLRYGGLSTCFRKE 268
>gi|296817321|ref|XP_002848997.1| seryl-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238839450|gb|EEQ29112.1| seryl-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 468
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 158/242 (65%), Gaps = 20/242 (8%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D DKYLIATSEQP+ A+H W+ E LPI +TC+R+E G+HG+D GIFRVH
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPI-----NTCYRKEAGAHGKDAWGIFRVH 284
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN+AA+KKLDL
Sbjct: 285 QFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDL 342
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQ+R L +R+G K + AT CAT R +C
Sbjct: 343 EAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCC 402
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLT 245
ILE +Q E G+ +P+ LRK++P +P+V+ P D K + K +G K
Sbjct: 403 ILENYQQEDGIVVPEALRKYIPG----NPEFLPYVRELPKDTTSQKVKAKGGKGDAAKAD 458
Query: 246 MS 247
++
Sbjct: 459 LA 460
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 139/216 (64%), Gaps = 14/216 (6%)
Query: 276 LTSPHDDESWKMLDEMIQNS----EEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWK 331
L++ HD E W + E+ N+ E D GIFRVHQFEK+EQF++T P +ESWK
Sbjct: 246 LSALHDGE-WILEKELPINTCYRKEAGAHGKDAWGIFRVHQFEKIEQFLITKP--EESWK 302
Query: 332 TLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL 391
DEMI SEEFY L I Y+V+ IVSGALN+AA+KKLDLEAWFP G ++ELVSCSNC
Sbjct: 303 AFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAWFPFQGEYKELVSCSNCT 362
Query: 392 AYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKF 451
YQ+R L +R+G K + K + H LNAT CAT R +C ILE +Q E G+ +P+ LRK+
Sbjct: 363 DYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILENYQQEDGIVVPEALRKY 422
Query: 452 VPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMK 487
+P +P+V+ P D T QK + +G K
Sbjct: 423 IPG----NPEFLPYVRELPKD---TTSQKVKAKGGK 451
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D DKYLIATSEQP+ A+H W+ E LPI +TC+R+E A
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPI-----NTCYRKEAGA 272
>gi|392575481|gb|EIW68614.1| hypothetical protein TREMEDRAFT_71854 [Tremella mesenterica DSM
1558]
Length = 457
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 148/223 (66%), Gaps = 15/223 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DDKYLIATSEQPI A+H D +L SLP+ Y G STCFR+E GSHG+DT GIFRVHQFEK
Sbjct: 242 DDKYLIATSEQPISALHSDEFLEPKSLPLLYAGYSTCFRKEAGSHGKDTWGIFRVHQFEK 301
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV+ P + S KMLD M++NS EFY L I YRVV IVSGALN+AA+ K DLEAWF
Sbjct: 302 VEQFVVCDP--ESSSKMLDMMVENSREFYESLEIPYRVVGIVSGALNNAASIKYDLEAWF 359
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--------QKIYATACATTRVICAILETH 190
P G ++ELVSCSNC DYQSR L VRYG K + T CAT R +C ++E +
Sbjct: 360 PYQGEYKELVSCSNCTDYQSRSLNVRYGYKKGGEKAAFVHMLNGTLCATERALCCLVENY 419
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
QT G+RIP L+ Y+ +P+ P D +++
Sbjct: 420 QTPEGIRIPKVLQP-----YMQGRDFLPYTAELPKDSTSNRRK 457
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 117/177 (66%), Gaps = 8/177 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFV+ P + S K LD M++NS EFY L I YRVV IVSGALN
Sbjct: 289 DTWGIFRVHQFEKVEQFVVCDP--ESSSKMLDMMVENSREFYESLEIPYRVVGIVSGALN 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+ K DLEAWFP G ++ELVSCSNC YQSR L VRYG KK EK FVHMLN T
Sbjct: 347 NAASIKYDLEAWFPYQGEYKELVSCSNCTDYQSRSLNVRYG-YKKGGEKAAFVHMLNGTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C ++E +QT G+RIP L+ Y+ +P+ P D +++
Sbjct: 406 CATERALCCLVENYQTPEGIRIPKVLQP-----YMQGRDFLPYTAELPKDSTSNRRK 457
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DDKYLIATSEQPI A+H D +L SLP+ Y G STCFR+E
Sbjct: 242 DDKYLIATSEQPISALHSDEFLEPKSLPLLYAGYSTCFRKEA 283
>gi|301117600|ref|XP_002906528.1| seryl-tRNA synthetase [Phytophthora infestans T30-4]
gi|262107877|gb|EEY65929.1| seryl-tRNA synthetase [Phytophthora infestans T30-4]
Length = 454
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 159/234 (67%), Gaps = 16/234 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+KYLIATSEQPIC H+ W+ E+SLP+RY G STCFR+E GSHG+DT GIFRVHQF+K
Sbjct: 228 DEKYLIATSEQPICGYHKGEWITESSLPLRYGGFSTCFRKEAGSHGKDTWGIFRVHQFDK 287
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +T P + S M +EM++++EEFY L + YRVVNIVSG LN+AA KK DLEAWF
Sbjct: 288 MEQFCITDP--ESSAAMHEEMLRHAEEFYQSLNLPYRVVNIVSGELNNAAVKKYDLEAWF 345
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P +RELVS SNC D+QSR + +R G K+ + +T CA+TR +C ILE
Sbjct: 346 PAYKEYRELVSASNCTDFQSRAMEIRCGVKKENQREKKYVHMLNSTLCASTRTVCCILEN 405
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
Q E GV++P+ L VP ++ A +PF + ++ + TK QK K+ K+
Sbjct: 406 FQDENGVKVPEVL---VP--FMGGATYLPFTREVKVNLQATKMQKAAKKKGSKQ 454
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 125/187 (66%), Gaps = 7/187 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQF +T P + S +EM++++EEFY L + YRVVNIVSG LN
Sbjct: 275 DTWGIFRVHQFDKMEQFCITDP--ESSAAMHEEMLRHAEEFYQSLNLPYRVVNIVSGELN 332
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA KK DLEAWFP +RELVS SNC +QSR + +R G K+ + ++VHMLN+T
Sbjct: 333 NAAVKKYDLEAWFPAYKEYRELVSASNCTDFQSRAMEIRCGVKKENQREKKYVHMLNSTL 392
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CA+TR +C ILE Q E GV++P+ L VP ++ A +PF + ++ + TK QK
Sbjct: 393 CASTRTVCCILENFQDENGVKVPEVL---VP--FMGGATYLPFTREVKVNLQATKMQKAA 447
Query: 483 KEGMKKK 489
K+ K+
Sbjct: 448 KKKGSKQ 454
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+KYLIATSEQPIC H+ W+ E+SLP+RY G STCFR+E
Sbjct: 228 DEKYLIATSEQPICGYHKGEWITESSLPLRYGGFSTCFRKEA 269
>gi|330933004|ref|XP_003304005.1| hypothetical protein PTT_16417 [Pyrenophora teres f. teres 0-1]
gi|311319652|gb|EFQ87890.1| hypothetical protein PTT_16417 [Pyrenophora teres f. teres 0-1]
Length = 593
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 152/222 (68%), Gaps = 19/222 (8%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A+H + WL LPI+Y G ST FR+E GSHG+D GIFR+HQFEKV
Sbjct: 371 DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGSHGKDAWGIFRIHQFEKV 430
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF+LT P ++SW+ DEM+ NSEEFY LG+ Y+VV IVSGALN+AA+ K DLEAWFP
Sbjct: 431 EQFLLTHP--EKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGALNNAASMKRDLEAWFP 488
Query: 140 --GSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILE 188
G G ++ELVS SNC DYQ+R L +R+G K + T CAT R +C ILE
Sbjct: 489 VTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALNGTLCATERTLCCILE 548
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK--TAPIDEE 228
+QT G +P+ LRK++P + +PFVK AP D++
Sbjct: 549 NYQTPEGFTVPEVLRKYIPG----QPEFLPFVKEWKAPKDDK 586
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 122/176 (69%), Gaps = 10/176 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFR+HQFEKVEQF+LT P ++SW+ DEM+ NSEEFY LG+ Y+VV IVSGALN
Sbjct: 417 DAWGIFRIHQFEKVEQFLLTHP--EKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGALN 474
Query: 363 HAAAKKLDLEAWFP--GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
+AA+ K DLEAWFP G G ++ELVS SNC YQ+R L +R+G K + E+VH LN
Sbjct: 475 NAASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALNG 534
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK--TAPIDEE 474
T CAT R +C ILE +QT G +P+ LRK++P + +PFVK AP D++
Sbjct: 535 TLCATERTLCCILENYQTPEGFTVPEVLRKYIPG----QPEFLPFVKEWKAPKDDK 586
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A+H + WL LPI+Y G ST FR+E +
Sbjct: 371 DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGS 413
>gi|328768059|gb|EGF78106.1| hypothetical protein BATDEDRAFT_90762 [Batrachochytrium
dendrobatidis JAM81]
Length = 472
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 150/212 (70%), Gaps = 17/212 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEAS-LPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFE 77
D KY+IATSEQPI A H W EA LP +Y G STCFR+E G+HGRDT GIFRVHQFE
Sbjct: 253 DAKYMIATSEQPISAFHSGEWFSEADELPKKYAGSSTCFRKEAGAHGRDTWGIFRVHQFE 312
Query: 78 KVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAW 137
KVEQFVLT P ++SW+M +EMI+ ++EFY LG+ Y V++IVSGALN++AAKK DLEAW
Sbjct: 313 KVEQFVLTHP--EKSWEMHEEMIEVAKEFYKSLGLPYHVISIVSGALNNSAAKKYDLEAW 370
Query: 138 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQ------TKQKIYATAC---ATTRVICAILE 188
FP G ++ELVSCSNC DYQSR L +R+G +K+ ++A C AT R IC ILE
Sbjct: 371 FPFQGTYKELVSCSNCTDYQSRELEIRFGTKKANDVSKKYVHALNCTLTATERTICCILE 430
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFV 220
QTETGV +P+ LR Y+ +PFV
Sbjct: 431 NFQTETGVVVPEPLRN-----YMGGKDFLPFV 457
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 116/164 (70%), Gaps = 7/164 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFVLT P ++SW+ +EMI+ ++EFY LG+ Y V++IVSGALN
Sbjct: 301 DTWGIFRVHQFEKVEQFVLTHP--EKSWEMHEEMIEVAKEFYKSLGLPYHVISIVSGALN 358
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++AAKK DLEAWFP G ++ELVSCSNC YQSR L +R+G K + ++VH LN T
Sbjct: 359 NSAAKKYDLEAWFPFQGTYKELVSCSNCTDYQSRELEIRFGTKKANDVSKKYVHALNCTL 418
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 466
AT R IC ILE QTETGV +P+ LR Y+ +PFV
Sbjct: 419 TATERTICCILENFQTETGVVVPEPLRN-----YMGGKDFLPFV 457
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 515 REVIGKGEKVGD-----SAPEKDELDDKYLIATSEQPICAVHRDSWLPEAS-LPIRYLGV 568
REV+ K ++ D + E + D KY+IATSEQPI A H W EA LP +Y G
Sbjct: 228 REVMAKTAQLEDFDEALYSVEGEAGDAKYMIATSEQPISAFHSGEWFSEADELPKKYAGS 287
Query: 569 STCFRQECDA 578
STCFR+E A
Sbjct: 288 STCFRKEAGA 297
>gi|392560214|gb|EIW53397.1| serine-tRNA ligase [Trametes versicolor FP-101664 SS1]
Length = 449
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 142/199 (71%), Gaps = 13/199 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H D W PE LP++Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 232 DEKYLIATSEQPISAFHSDEWFDSPETQLPVKYAGYSTCFRKEAGSAGRDMWGIFRVHQF 291
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P ++SW+MLD M+ NSE FY L I YRVV IVSGALN AAA+K DLEA
Sbjct: 292 EKVEQFCITEP--EKSWEMLDAMVANSEAFYQSLKIPYRVVAIVSGALNLAAAQKYDLEA 349
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVICAIL 187
WFP GA++ELVSCSNC DYQSRRL VR G +K+Y T CAT R +C ++
Sbjct: 350 WFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKAKDQARKLYVHMLNGTLCATERALCCLV 409
Query: 188 ETHQTETGVRIPDCLRKFV 206
E +QT G+ IP+ LR ++
Sbjct: 410 ENYQTPEGLVIPEVLRPYM 428
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/153 (59%), Positives = 109/153 (71%), Gaps = 2/153 (1%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQF +T P ++SW+ LD M+ NSE FY L I YRVV IVSG
Sbjct: 278 AGRDMWGIFRVHQFEKVEQFCITEP--EKSWEMLDAMVANSEAFYQSLKIPYRVVAIVSG 335
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAA+K DLEAWFP GA++ELVSCSNC YQSRRL VR G K + +VHMLN
Sbjct: 336 ALNLAAAQKYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKAKDQARKLYVHMLN 395
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFV 452
T CAT R +C ++E +QT G+ IP+ LR ++
Sbjct: 396 GTLCATERALCCLVENYQTPEGLVIPEVLRPYM 428
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI A H D W PE LP++Y G STCFR+E +
Sbjct: 232 DEKYLIATSEQPISAFHSDEWFDSPETQLPVKYAGYSTCFRKEAGSA 278
>gi|45185142|ref|NP_982859.1| ABL088Cp [Ashbya gossypii ATCC 10895]
gi|44980778|gb|AAS50683.1| ABL088Cp [Ashbya gossypii ATCC 10895]
gi|374106061|gb|AEY94971.1| FABL088Cp [Ashbya gossypii FDAG1]
Length = 459
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 153/229 (66%), Gaps = 17/229 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E G+HG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGAHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQF +T P ++SW+ D MI NSEEFY LGI YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFCITEP--EKSWEEFDSMIANSEEFYQSLGIPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQQEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
+LE +QTE G+ +P+ LRK++P E IP+ K P + K++
Sbjct: 414 CLLENYQTEDGLVVPEVLRKYIPG----EPEFIPYSKELPKNSTSNKRK 458
Score = 186 bits (471), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 119/177 (67%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQF +T P ++SW+ D MI NSEEFY LGI YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFCITEP--EKSWEEFDSMIANSEEFYQSLGIPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQQEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C +LE +QTE G+ +P+ LRK++P E IP+ K P + K++
Sbjct: 406 AATQRALCCLLENYQTEDGLVVPEVLRKYIPG----EPEFIPYSKELPKNSTSNKRK 458
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E A
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGA 284
>gi|189189974|ref|XP_001931326.1| seryl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972932|gb|EDU40431.1| seryl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 476
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 152/222 (68%), Gaps = 19/222 (8%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A+H + WL LPI+Y G ST FR+E GSHG+D GIFR+HQFEKV
Sbjct: 254 DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGSHGKDAWGIFRIHQFEKV 313
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF+LT P ++SW+ DEM+ NSEEFY LG+ Y+VV IVSGALN+AA+ K DLEAWFP
Sbjct: 314 EQFLLTHP--EKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGALNNAASMKRDLEAWFP 371
Query: 140 --GSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILE 188
G G ++ELVS SNC DYQ+R L +R+G K + T CAT R +C ILE
Sbjct: 372 VTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALNGTLCATERTLCCILE 431
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK--TAPIDEE 228
+QT G +P+ LRK++P + +PFVK AP D++
Sbjct: 432 NYQTPEGFTVPEVLRKYIPG----QPEFLPFVKEWKAPKDDK 469
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 122/176 (69%), Gaps = 10/176 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFR+HQFEKVEQF+LT P ++SW+ DEM+ NSEEFY LG+ Y+VV IVSGALN
Sbjct: 300 DAWGIFRIHQFEKVEQFLLTHP--EKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGALN 357
Query: 363 HAAAKKLDLEAWFP--GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
+AA+ K DLEAWFP G G ++ELVS SNC YQ+R L +R+G K + E+VH LN
Sbjct: 358 NAASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALNG 417
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK--TAPIDEE 474
T CAT R +C ILE +QT G +P+ LRK++P + +PFVK AP D++
Sbjct: 418 TLCATERTLCCILENYQTPEGFTVPEVLRKYIPG----QPEFLPFVKEWKAPKDDK 469
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A+H + WL LPI+Y G ST FR+E +
Sbjct: 254 DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGS 296
>gi|406602092|emb|CCH46312.1| seryl-tRNA synthetase [Wickerhamomyces ciferrii]
Length = 458
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 151/226 (66%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P LP+RY G S+CFR+E GSHG+D GIFRVH F
Sbjct: 239 DEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +T P ++SW+ D MI SE+FY LG+ YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFCITEP--EKSWEEFDRMINLSEQFYQSLGLPYRVVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G ++K Y +T CAT R +C IL
Sbjct: 357 WFPFQQEYKELVSCSNCTDYQSRNLEIRSGIKKLNEREKKYVHCLNSTLCATERALCCIL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QT+ G+ IP+ LRK++P E IP++K P + KK+
Sbjct: 417 ENYQTDDGLVIPEVLRKYIPG----EPEFIPYLKDLPKNSTSQKKK 458
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 123/178 (69%), Gaps = 8/178 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQF +T P ++SW+ D MI SE+FY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFCITEP--EKSWEEFDRMINLSEQFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK-IEFVHMLNAT 421
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G KK+NE+ ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRSG-IKKLNEREKKYVHCLNST 404
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C ILE +QT+ G+ IP+ LRK++P E IP++K P + KK+
Sbjct: 405 LCATERALCCILENYQTDDGLVIPEVLRKYIPG----EPEFIPYLKDLPKNSTSQKKK 458
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
D+KYLIATSEQPI A H W P LP+RY G S+CFR+E
Sbjct: 239 DEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREA 282
>gi|395329294|gb|EJF61681.1| serine-tRNA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 450
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 151/217 (69%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H D W PE LPI+Y+G STCFR+E GS GRD GIFRVHQF
Sbjct: 233 DEKYLIATSEQPISAFHSDEWFDSPETQLPIKYVGYSTCFRKEAGSAGRDMWGIFRVHQF 292
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P ++SW++ D+M+ NSE FY L I YRVV IVSGALN AA++K DLEA
Sbjct: 293 EKVEQFCITEP--EKSWEVFDQMVANSEAFYQSLKIPYRVVAIVSGALNLAASQKYDLEA 350
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG-QTKQ---KIY-----ATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSRRL VR G +TK+ K+Y T CAT R +C I+
Sbjct: 351 WFPFQGQYKELVSCSNCTDYQSRRLEVRCGLKTKEQTRKVYVHMLNGTLCATERALCCIV 410
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+ +P+ LR Y+ +P+VK P
Sbjct: 411 ENYQTPEGLVVPEVLRP-----YMQGREFLPWVKELP 442
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 118/172 (68%), Gaps = 9/172 (5%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQF +T P ++SW+ D+M+ NSE FY L I YRVV IVSG
Sbjct: 279 AGRDMWGIFRVHQFEKVEQFCITEP--EKSWEVFDQMVANSEAFYQSLKIPYRVVAIVSG 336
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG-QTKKMNEKIEFVHML 418
ALN AA++K DLEAWFP G ++ELVSCSNC YQSRRL VR G +TK+ K+ +VHML
Sbjct: 337 ALNLAASQKYDLEAWFPFQGQYKELVSCSNCTDYQSRRLEVRCGLKTKEQTRKV-YVHML 395
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
N T CAT R +C I+E +QT G+ +P+ LR Y+ +P+VK P
Sbjct: 396 NGTLCATERALCCIVENYQTPEGLVVPEVLRP-----YMQGREFLPWVKELP 442
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI A H D W PE LPI+Y+G STCFR+E +
Sbjct: 233 DEKYLIATSEQPISAFHSDEWFDSPETQLPIKYVGYSTCFRKEAGSA 279
>gi|451999480|gb|EMD91942.1| hypothetical protein COCHEDRAFT_1154958 [Cochliobolus
heterostrophus C5]
Length = 595
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 147/213 (69%), Gaps = 17/213 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A+H + WL LPI+Y G ST FR+E GSHG+D GIFR+HQFEKV
Sbjct: 373 DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGSHGKDAWGIFRIHQFEKV 432
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF+LT P ++SW+ DEM+ NSEEFY LG+ Y+VV IVSGALN+AA+ K DLEAWFP
Sbjct: 433 EQFLLTHP--EKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGALNNAASMKRDLEAWFP 490
Query: 140 --GSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILE 188
G G ++ELVS SNC DYQ+R L +R+G K + T CAT R +C ILE
Sbjct: 491 VTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALNGTLCATERTLCCILE 550
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
+QT G +P+ LRK++P + +PFVK
Sbjct: 551 NYQTPEGFVVPEVLRKYIPG----QPDFLPFVK 579
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 8/167 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFR+HQFEKVEQF+LT P ++SW+ DEM+ NSEEFY LG+ Y+VV IVSGALN
Sbjct: 419 DAWGIFRIHQFEKVEQFLLTHP--EKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGALN 476
Query: 363 HAAAKKLDLEAWFP--GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
+AA+ K DLEAWFP G G ++ELVS SNC YQ+R L +R+G K + E+VH LN
Sbjct: 477 NAASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALNG 536
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
T CAT R +C ILE +QT G +P+ LRK++P + +PFVK
Sbjct: 537 TLCATERTLCCILENYQTPEGFVVPEVLRKYIPG----QPDFLPFVK 579
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A+H + WL LPI+Y G ST FR+E +
Sbjct: 373 DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGS 415
>gi|170094981|ref|XP_001878711.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646015|gb|EDR10261.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 452
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 149/218 (68%), Gaps = 20/218 (9%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI H D W P+ LPI+Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 235 DEKYLIATSEQPISGYHSDEWFESPDTQLPIKYAGYSTCFRKEAGSAGRDMWGIFRVHQF 294
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV++ P ++SW+MLD MI NSE FY LG+ YRVV IVSGALN AAA+K DLEA
Sbjct: 295 EKVEQFVISDP--EKSWEMLDVMIGNSEAFYQSLGLRYRVVGIVSGALNLAAAQKCDLEA 352
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY-----ATACATTRVICAI 186
WFP A++ELVSCSNC DYQSRRL +R G QT+ K+Y T CAT R +C +
Sbjct: 353 WFPFQRAYKELVSCSNCTDYQSRRLEIRCGLKNKDQTR-KVYVHMLNGTLCATERALCCL 411
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
+E +QT G+ IP+ LR Y+ IPF + P
Sbjct: 412 VENYQTPEGLVIPEVLRP-----YMQGRDFIPFTRELP 444
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 115/171 (67%), Gaps = 7/171 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQFV++ P ++SW+ LD MI NSE FY LG+ YRVV IVSG
Sbjct: 281 AGRDMWGIFRVHQFEKVEQFVISDP--EKSWEMLDVMIGNSEAFYQSLGLRYRVVGIVSG 338
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAA+K DLEAWFP A++ELVSCSNC YQSRRL +R G K + +VHMLN
Sbjct: 339 ALNLAAAQKCDLEAWFPFQRAYKELVSCSNCTDYQSRRLEIRCGLKNKDQTRKVYVHMLN 398
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
T CAT R +C ++E +QT G+ IP+ LR Y+ IPF + P
Sbjct: 399 GTLCATERALCCLVENYQTPEGLVIPEVLRP-----YMQGRDFIPFTRELP 444
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI H D W P+ LPI+Y G STCFR+E +
Sbjct: 235 DEKYLIATSEQPISGYHSDEWFESPDTQLPIKYAGYSTCFRKEAGSA 281
>gi|451854401|gb|EMD67694.1| hypothetical protein COCSADRAFT_168875 [Cochliobolus sativus
ND90Pr]
Length = 600
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 147/213 (69%), Gaps = 17/213 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A+H + WL LPI+Y G ST FR+E GSHG+D GIFR+HQFEKV
Sbjct: 378 DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGSHGKDAWGIFRIHQFEKV 437
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF+LT P ++SW+ DEM+ NSEEFY LG+ Y+VV IVSGALN+AA+ K DLEAWFP
Sbjct: 438 EQFLLTHP--EKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGALNNAASMKRDLEAWFP 495
Query: 140 --GSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILE 188
G G ++ELVS SNC DYQ+R L +R+G K + T CAT R +C ILE
Sbjct: 496 VTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALNGTLCATERTLCCILE 555
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
+QT G +P+ LRK++P + +PFVK
Sbjct: 556 NYQTPEGFVVPEVLRKYIPG----QPDFLPFVK 584
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 8/167 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFR+HQFEKVEQF+LT P ++SW+ DEM+ NSEEFY LG+ Y+VV IVSGALN
Sbjct: 424 DAWGIFRIHQFEKVEQFLLTHP--EKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGALN 481
Query: 363 HAAAKKLDLEAWFP--GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
+AA+ K DLEAWFP G G ++ELVS SNC YQ+R L +R+G K + E+VH LN
Sbjct: 482 NAASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALNG 541
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
T CAT R +C ILE +QT G +P+ LRK++P + +PFVK
Sbjct: 542 TLCATERTLCCILENYQTPEGFVVPEVLRKYIPG----QPDFLPFVK 584
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A+H + WL LPI+Y G ST FR+E +
Sbjct: 378 DKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGS 420
>gi|302668108|ref|XP_003025631.1| hypothetical protein TRV_00198 [Trichophyton verrucosum HKI 0517]
gi|291189748|gb|EFE45020.1| hypothetical protein TRV_00198 [Trichophyton verrucosum HKI 0517]
Length = 468
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/234 (51%), Positives = 156/234 (66%), Gaps = 23/234 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D DKYLIATSEQP+ A+H W+ E LPI +TC+R+E G+HG+D GIFRVH
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPI-----NTCYRKEAGAHGKDAWGIFRVH 284
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQF++T P +ESWK DEMI SEEFY L I Y+V+ IVSGALN+AA+KKLDL
Sbjct: 285 QFEKIEQFLITKP--EESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDL 342
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQ+R L +R+G K + AT CAT R +C
Sbjct: 343 EAWFPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCC 402
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEG 239
ILE +Q E G+ +P+ LRK++P +P+V+ P D T QK + +G
Sbjct: 403 ILENYQQEDGIIVPEVLRKYIPG----NPEFLPYVRELPKD---TTSQKVKAKG 449
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 138/214 (64%), Gaps = 14/214 (6%)
Query: 276 LTSPHDDESWKMLDEMIQNS----EEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWK 331
L++ HD E W + E+ N+ E D GIFRVHQFEK+EQF++T P +ESWK
Sbjct: 246 LSALHDGE-WILEKELPINTCYRKEAGAHGKDAWGIFRVHQFEKIEQFLITKP--EESWK 302
Query: 332 TLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL 391
DEMI SEEFY L I Y+V+ IVSGALN+AA+KKLDLEAWFP G ++ELVSCSNC
Sbjct: 303 AFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAWFPFQGEYKELVSCSNCT 362
Query: 392 AYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKF 451
YQ+R L +R+G K + K + H LNAT CAT R +C ILE +Q E G+ +P+ LRK+
Sbjct: 363 DYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILENYQQEDGIIVPEVLRKY 422
Query: 452 VPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEG 485
+P +P+V+ P D T QK + +G
Sbjct: 423 IPG----NPEFLPYVRELPKD---TTSQKVKAKG 449
Score = 49.3 bits (116), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D DKYLIATSEQP+ A+H W+ E LPI +TC+R+E A
Sbjct: 230 EDPSTDKYLIATSEQPLSALHDGEWILEKELPI-----NTCYRKEAGA 272
>gi|116199279|ref|XP_001225451.1| hypothetical protein CHGG_07795 [Chaetomium globosum CBS 148.51]
gi|88179074|gb|EAQ86542.1| hypothetical protein CHGG_07795 [Chaetomium globosum CBS 148.51]
Length = 608
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 155/236 (65%), Gaps = 27/236 (11%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI A H D WL LP++Y G STCFR+E G+HG+D GIFRVH+F KV
Sbjct: 390 DKYLIATSEQPISAYHSDEWLQPKELPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKV 449
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M + MI SE+FY LGI + + ++AAAKKLDLEAWFP
Sbjct: 450 EQFCITDP--EKSWEMFENMISTSEDFYKSLGIPHHLP-------DNAAAKKLDLEAWFP 500
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAILETH 190
G F+ELVSCSNC DYQSR L +R+G KQ KIY +T ATTR ICAILE
Sbjct: 501 HQGEFKELVSCSNCTDYQSRDLEIRFGIKKQTDAKKIYVHCLNSTLTATTRTICAILENF 560
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTM 246
QTE GV IP+ LRK++P IPF K A KK+ +KEG KK++ +
Sbjct: 561 QTEDGVNIPEPLRKYLPGA----PAFIPFAKQA-----AEKKEGDKKEGQKKEIPV 607
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 122/190 (64%), Gaps = 18/190 (9%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH+F KVEQF +T P ++SW+ + MI SE+FY LGI + + +
Sbjct: 436 DVWGIFRVHEFTKVEQFCITDP--EKSWEMFENMISTSEDFYKSLGIPHHLPD------- 486
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKKLDLEAWFP G F+ELVSCSNC YQSR L +R+G K+ + K +VH LN+T
Sbjct: 487 NAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLEIRFGIKKQTDAKKIYVHCLNSTL 546
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
ATTR ICAILE QTE GV IP+ LRK++P IPF K A KK+ +
Sbjct: 547 TATTRTICAILENFQTEDGVNIPEPLRKYLPGA----PAFIPFAKQA-----AEKKEGDK 597
Query: 483 KEGMKKKVLI 492
KEG KK++ +
Sbjct: 598 KEGQKKEIPV 607
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DKYLIATSEQPI A H D WL LP++Y G STCFR+E A
Sbjct: 390 DKYLIATSEQPISAYHSDEWLQPKELPLKYAGYSTCFRKEAGA 432
>gi|365982297|ref|XP_003667982.1| hypothetical protein NDAI_0A05840 [Naumovozyma dairenensis CBS 421]
gi|343766748|emb|CCD22739.1| hypothetical protein NDAI_0A05840 [Naumovozyma dairenensis CBS 421]
Length = 458
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 152/226 (67%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E GSHG+D GIFRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGKDAWGIFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF LT P ++SW+ D+MI +SE FY L + YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFCLTEP--EKSWEEFDKMINHSEAFYQSLKLPYRVVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C IL
Sbjct: 357 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATERALCCIL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QTE G+ +P+ LRK++P E +P+VK P + KK+
Sbjct: 417 ENYQTEDGLIVPEVLRKYIPG----EPEFLPYVKELPKNSTSNKKK 458
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 119/177 (67%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQF LT P ++SW+ D+MI +SE FY L + YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFCLTEP--EKSWEEFDKMINHSEAFYQSLKLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
AT R +C ILE +QTE G+ +P+ LRK++P E +P+VK P + KK+
Sbjct: 406 AATERALCCILENYQTEDGLIVPEVLRKYIPG----EPEFLPYVKELPKNSTSNKKK 458
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRTYFH 586
D+KYLIATSEQPI A H W P+ LPIRY+G S+CFR+E + G+ R +
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGKDAWGIFRVHAF 298
Query: 587 VTCAQREGLLSEATSEEVDQ----ADPFYAHCRL 616
Q E + EE D+ ++ FY +L
Sbjct: 299 EKIEQFCLTEPEKSWEEFDKMINHSEAFYQSLKL 332
>gi|442751401|gb|JAA67860.1| Putative seryl-trna synthetase [Ixodes ricinus]
Length = 163
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/157 (73%), Positives = 129/157 (82%), Gaps = 3/157 (1%)
Query: 333 LDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLA 392
DEMI N+EEF LGI YRVV+IVSGALN+AAAKK DLEAWFP SGAFRELVSCSNCL
Sbjct: 2 FDEMIGNAEEFCQKLGIPYRVVSIVSGALNNAAAKKHDLEAWFPASGAFRELVSCSNCLD 61
Query: 393 YQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 452
YQSRRLL+RYGQTKKMN + E+VHMLNAT CA TRVICAILE HQTETGV +P+ LR F+
Sbjct: 62 YQSRRLLIRYGQTKKMNAQTEYVHMLNATMCAVTRVICAILENHQTETGVVVPEALRPFM 121
Query: 453 PAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 489
P + IPFVK AP+DE ETKKQ+K +EGM+KK
Sbjct: 122 PPAFRE---PIPFVKPAPVDEAETKKQRKHREGMEKK 155
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 108/158 (68%), Positives = 122/158 (77%), Gaps = 12/158 (7%)
Query: 95 MLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL 154
M DEMI N+EEF LGI YRVV+IVSGALN+AAAKK DLEAWFP SGAFRELVSCSNCL
Sbjct: 1 MFDEMIGNAEEFCQKLGIPYRVVSIVSGALNNAAAKKHDLEAWFPASGAFRELVSCSNCL 60
Query: 155 DYQSRRLLVRYGQTKQ---------KIYATACATTRVICAILETHQTETGVRIPDCLRKF 205
DYQSRRLL+RYGQTK+ + AT CA TRVICAILE HQTETGV +P+ LR F
Sbjct: 61 DYQSRRLLIRYGQTKKMNAQTEYVHMLNATMCAVTRVICAILENHQTETGVVVPEALRPF 120
Query: 206 VPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243
+P + IPFVK AP+DE ETKKQ+K +EGM+KK
Sbjct: 121 MPPAFRE---PIPFVKPAPVDEAETKKQRKHREGMEKK 155
>gi|409047701|gb|EKM57180.1| hypothetical protein PHACADRAFT_254765 [Phanerochaete carnosa
HHB-10118-sp]
Length = 450
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 148/217 (68%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H + W PE LP++Y G STCFR+E GS GRD GIFRVHQF
Sbjct: 233 DEKYLIATSEQPISAYHSNEWFESPETQLPLKYAGYSTCFRKEAGSAGRDMWGIFRVHQF 292
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +TSP ++SW++ D+M+ SEEFY L I YR V IVSGALN AA++K DLEA
Sbjct: 293 EKIEQFCITSP--EKSWEIFDQMVGTSEEFYQSLNIPYRAVAIVSGALNLAASQKYDLEA 350
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVICAIL 187
WFP GA++ELVSCSNC DYQSRRL VR G ++KIY T CAT R +C I
Sbjct: 351 WFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKTKDQQRKIYVHMLNGTLCATERALCCIA 410
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+ +P+ LR Y+ +P+VK P
Sbjct: 411 ENYQTAEGLVVPEVLRP-----YMQGRDFLPWVKELP 442
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 115/171 (67%), Gaps = 7/171 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEK+EQF +TSP ++SW+ D+M+ SEEFY L I YR V IVSG
Sbjct: 279 AGRDMWGIFRVHQFEKIEQFCITSP--EKSWEIFDQMVGTSEEFYQSLNIPYRAVAIVSG 336
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AA++K DLEAWFP GA++ELVSCSNC YQSRRL VR G K ++ +VHMLN
Sbjct: 337 ALNLAASQKYDLEAWFPFQGAYKELVSCSNCTDYQSRRLEVRCGLKTKDQQRKIYVHMLN 396
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
T CAT R +C I E +QT G+ +P+ LR Y+ +P+VK P
Sbjct: 397 GTLCATERALCCIAENYQTAEGLVVPEVLRP-----YMQGRDFLPWVKELP 442
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI A H + W PE LP++Y G STCFR+E +
Sbjct: 233 DEKYLIATSEQPISAYHSNEWFESPETQLPLKYAGYSTCFRKEAGSA 279
>gi|344301184|gb|EGW31496.1| Seryl-tRNA synthetase, cytoplasmic [Spathaspora passalidarum NRRL
Y-27907]
Length = 461
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 154/233 (66%), Gaps = 17/233 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 235 DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSHGKDAWGIFRV 294
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SE+FY L + YRVV IVSG LN+AAAKK D
Sbjct: 295 HAFEKIEQFVLTEP--EKSWQEFDRMIGLSEQFYQSLKLPYRVVGIVSGELNNAAAKKYD 352
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R +C
Sbjct: 353 LEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLTATERTLC 412
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQK 237
ILE +QTE G+ +P+ LRK++P E I F K P + KK+ +K
Sbjct: 413 CILENYQTEDGLIVPEVLRKYIPG----EPEFIEFAKELPKNSTSNKKKDGKK 461
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 119/181 (65%), Gaps = 6/181 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SE+FY L + YRVV IVSG LN
Sbjct: 287 DAWGIFRVHAFEKIEQFVLTEP--EKSWQEFDRMIGLSEQFYQSLKLPYRVVGIVSGELN 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 345 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 404
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
AT R +C ILE +QTE G+ +P+ LRK++P E I F K P + KK+ +
Sbjct: 405 TATERTLCCILENYQTEDGLIVPEVLRKYIPG----EPEFIEFAKELPKNSTSNKKKDGK 460
Query: 483 K 483
K
Sbjct: 461 K 461
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E +
Sbjct: 235 DGEDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGS 283
>gi|403375109|gb|EJY87525.1| Seryl-tRNA synthetase, cytoplasmic, putative [Oxytricha trifallax]
Length = 465
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 141/192 (73%), Gaps = 9/192 (4%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YL+ATSEQPI A+HR+ W+ LPIRY G+S+CFR+E G+HGRD GIFRVHQFEKVEQ
Sbjct: 243 YLVATSEQPISALHRNEWIEPQDLPIRYAGISSCFRKEAGAHGRDVWGIFRVHQFEKVEQ 302
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F +T+P ++SW+M +EMI+ +E FY +L + YRVVNIVSG LN AAAKK DLEAWFPG
Sbjct: 303 FCITTP--EKSWEMHEEMIRIAETFYKNLELPYRVVNIVSGELNDAAAKKYDLEAWFPGY 360
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIY-----ATACATTRVICAILETHQTET 194
A+RELVS SNC DYQSR L VR K+Y AT CAT R +C ILE +QT
Sbjct: 361 EAYRELVSSSNCTDYQSRGLEVRLALKNNTNKVYVHMLNATLCATERTMCCILENYQTPE 420
Query: 195 GVRIPDCLRKFV 206
GVR+P L+ F+
Sbjct: 421 GVRVPAVLQPFM 432
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/150 (60%), Positives = 108/150 (72%), Gaps = 4/150 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQF +T+P ++SW+ +EMI+ +E FY +L + YRVVNIVSG LN
Sbjct: 287 DVWGIFRVHQFEKVEQFCITTP--EKSWEMHEEMIRIAETFYKNLELPYRVVNIVSGELN 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPG A+RELVS SNC YQSR L VR N+ +VHMLNAT
Sbjct: 345 DAAAKKYDLEAWFPGYEAYRELVSSSNCTDYQSRGLEVRLALKNNTNKV--YVHMLNATL 402
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452
CAT R +C ILE +QT GVR+P L+ F+
Sbjct: 403 CATERTMCCILENYQTPEGVRVPAVLQPFM 432
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
YL+ATSEQPI A+HR+ W+ LPIRY G+S+CFR+E A
Sbjct: 243 YLVATSEQPISALHRNEWIEPQDLPIRYAGISSCFRKEAGA 283
>gi|154312140|ref|XP_001555398.1| hypothetical protein BC1G_06103 [Botryotinia fuckeliana B05.10]
Length = 471
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/239 (53%), Positives = 151/239 (63%), Gaps = 26/239 (10%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +DKYLIATSEQPI A H D WL +PIR +E GSHGRD GIFRVHQ
Sbjct: 230 DAQNDKYLIATSEQPISAFHADEWLTAKDMPIR---------REAGSHGRDAWGIFRVHQ 280
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSGALN+AAAKK DLE
Sbjct: 281 FEKIEQFVLTDP--EKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDLE 338
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G ++ELVSCSNC DYQSR L +RYG Q + +T CAT R +C +
Sbjct: 339 AWFPFQGEYKELVSCSNCTDYQSRALEIRYGPKTQTGIRKNYVHALNSTLCATERALCCL 398
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQKEGMKKKL 244
LE QTE G +P LRK++P A E IPF K P D K + K ++ K K+
Sbjct: 399 LENFQTEEGFNVPAPLRKYLPG-----APEFIPFSKELPKDTTSQKAKGKAEKAPKPKV 452
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 135/216 (62%), Gaps = 9/216 (4%)
Query: 276 LTSPHDDESWKMLDEMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDE 335
+++ H DE W +M E D GIFRVHQFEK+EQFVLT P ++SW+ D
Sbjct: 245 ISAFHADE-WLTAKDMPIRREAGSHGRDAWGIFRVHQFEKIEQFVLTDP--EKSWEEFDR 301
Query: 336 MIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQS 395
MI SEEFY LG+ YRVV IVSGALN+AAAKK DLEAWFP G ++ELVSCSNC YQS
Sbjct: 302 MISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQS 361
Query: 396 RRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
R L +RYG + + +VH LN+T CAT R +C +LE QTE G +P LRK++P
Sbjct: 362 RALEIRYGPKTQTGIRKNYVHALNSTLCATERALCCLLENFQTEEGFNVPAPLRKYLPG- 420
Query: 456 YVNEAGE-IPFVKTAPIDEEETKKQKKQKEGMKKKV 490
A E IPF K P D K + K ++ K KV
Sbjct: 421 ----APEFIPFSKELPKDTTSQKAKGKAEKAPKPKV 452
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 23/33 (69%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIR 564
D +DKYLIATSEQPI A H D WL +PIR
Sbjct: 230 DAQNDKYLIATSEQPISAFHADEWLTAKDMPIR 262
>gi|237836223|ref|XP_002367409.1| seryl-tRNA synthetase, putative [Toxoplasma gondii ME49]
gi|211965073|gb|EEB00269.1| seryl-tRNA synthetase, putative [Toxoplasma gondii ME49]
gi|221505903|gb|EEE31538.1| seryl-tRNA synthetase, putative [Toxoplasma gondii VEG]
Length = 482
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 158/243 (65%), Gaps = 25/243 (10%)
Query: 6 EKVGDSAPEKD-ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHG 64
EK G+ EKD + DD +LIATSEQP+C++H + L E LPIRY G S+CFR+E GSHG
Sbjct: 248 EKNGEKKNEKDADRDDLFLIATSEQPLCSLHMNETLEEKELPIRYAGYSSCFRKEAGSHG 307
Query: 65 RDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGAL 124
+D GIFR+HQFEKVEQF +T+P +ESWKM ++MI +EEFY L + YRVV+IVSGAL
Sbjct: 308 KDCWGIFRIHQFEKVEQFCITTP--EESWKMHEDMIGMAEEFYQTLELPYRVVSIVSGAL 365
Query: 125 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------------- 171
N AAAKK DLEAWFPG G FRELVSCSNC DYQ+R L +R
Sbjct: 366 NDAAAKKYDLEAWFPGYGDFRELVSCSNCTDYQARALDIRLAHKSSSAKGADRNEKAHVH 425
Query: 172 -IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ T AT R +C ILE +QT GV++P R VP Y+ A +PFV EE
Sbjct: 426 MLNGTLVATQRCLCCILENYQTPLGVKVP---RVLVP--YMGGAEFLPFVDAG---EESV 477
Query: 231 KKQ 233
KK+
Sbjct: 478 KKE 480
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 118/183 (64%), Gaps = 17/183 (9%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFR+HQFEKVEQF +T+P +ESWK ++MI +EEFY L + YRVV+IVSGALN
Sbjct: 309 DCWGIFRIHQFEKVEQFCITTP--EESWKMHEDMIGMAEEFYQTLELPYRVVSIVSGALN 366
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKK------MNEKIEFVH 416
AAAKK DLEAWFPG G FRELVSCSNC YQ+R L +R NEK VH
Sbjct: 367 DAAAKKYDLEAWFPGYGDFRELVSCSNCTDYQARALDIRLAHKSSSAKGADRNEKAH-VH 425
Query: 417 MLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476
MLN T AT R +C ILE +QT GV++P R VP Y+ A +PFV EE
Sbjct: 426 MLNGTLVATQRCLCCILENYQTPLGVKVP---RVLVP--YMGGAEFLPFVDAG---EESV 477
Query: 477 KKQ 479
KK+
Sbjct: 478 KKE 480
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 486 MKKKVLIDEAMIQN-EKDLIATEKERNNALREVIGKGEKVGDSAPEKD-ELDDKYLIATS 543
M+K+V+ A +++ E+ L + + EK G+ EKD + DD +LIATS
Sbjct: 211 MRKEVMARAAELKDFEETLYRIPHNQTGGSADSKEGAEKNGEKKNEKDADRDDLFLIATS 270
Query: 544 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
EQP+C++H + L E LPIRY G S+CFR+E +
Sbjct: 271 EQPLCSLHMNETLEEKELPIRYAGYSSCFRKEAGS 305
>gi|190344834|gb|EDK36592.2| seryl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 148/217 (68%), Gaps = 17/217 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W PE LP+RY G S+CFR+E GSHG+D GIFRVH F
Sbjct: 277 DEKYLIATSEQPISAYHAGEWFESPEEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAF 336
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ D MI SE+FY LG+ YRVV IVSG LN+AAAKK DLEA
Sbjct: 337 EKIEQFVLTEP--EKSWEEFDRMIGLSEKFYQSLGLPYRVVGIVSGELNNAAAKKYDLEA 394
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R +C IL
Sbjct: 395 WFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALCCIL 454
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +Q E G+ +P+ LRK++P E IP+ K P
Sbjct: 455 ENYQKEDGLVVPEVLRKYIPG----EPEFIPYAKELP 487
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 114/168 (67%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SE+FY LG+ YRVV IVSG LN
Sbjct: 326 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGLSEKFYQSLGLPYRVVGIVSGELN 383
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 384 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 443
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +Q E G+ +P+ LRK++P E IP+ K P
Sbjct: 444 SATQRALCCILENYQKEDGLVVPEVLRKYIPG----EPEFIPYAKELP 487
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H W PE LP+RY G S+CFR+E +
Sbjct: 277 DEKYLIATSEQPISAYHAGEWFESPEEQLPVRYAGYSSCFRREAGS 322
>gi|146422756|ref|XP_001487313.1| seryl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 148/217 (68%), Gaps = 17/217 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W PE LP+RY G S+CFR+E GSHG+D GIFRVH F
Sbjct: 277 DEKYLIATSEQPISAYHAGEWFESPEEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAF 336
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ D MI SE+FY LG+ YRVV IVSG LN+AAAKK DLEA
Sbjct: 337 EKIEQFVLTEP--EKSWEEFDRMIGLSEKFYQSLGLPYRVVGIVSGELNNAAAKKYDLEA 394
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK----IYATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G QT++K + +T AT R +C IL
Sbjct: 395 WFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALCCIL 454
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +Q E G+ +P+ LRK++P E IP+ K P
Sbjct: 455 ENYQKEDGLVVPEVLRKYIPG----EPEFIPYAKELP 487
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 114/168 (67%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SE+FY LG+ YRVV IVSG LN
Sbjct: 326 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGLSEKFYQSLGLPYRVVGIVSGELN 383
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ + ++VH LN+T
Sbjct: 384 NAAAKKYDLEAWFPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTL 443
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +Q E G+ +P+ LRK++P E IP+ K P
Sbjct: 444 SATQRALCCILENYQKEDGLVVPEVLRKYIPG----EPEFIPYAKELP 487
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H W PE LP+RY G S+CFR+E +
Sbjct: 277 DEKYLIATSEQPISAYHAGEWFESPEEQLPVRYAGYSSCFRREAGS 322
>gi|412994153|emb|CCO14664.1| seryl-tRNA synthetase [Bathycoccus prasinos]
Length = 628
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 143/214 (66%), Gaps = 15/214 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIATSEQ C+ R WL E LPIR G STCFR+EVGSHGRDT GIFRVHQF
Sbjct: 228 EGDDKYLIATSEQTCCSYLRKLWLNEKDLPIRLSGYSTCFRKEVGSHGRDTLGIFRVHQF 287
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV +P + SW+ +D +I N+E FY L I Y VVNIVSG LN AAAKK DLEA
Sbjct: 288 EKVEQFVAVTPEGNASWEEMDRLIGNAEAFYQSLNIPYNVVNIVSGELNDAAAKKYDLEA 347
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG-------QTKQKIY---ATACATTRVICAI 186
WFP S RELVSCSNC DYQSRRL +RYG +TK ++ +T AT R +C +
Sbjct: 348 WFPSSRTHRELVSCSNCTDYQSRRLEIRYGAPQKGPEKTKSYVHLLNSTLTATERSLCCL 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFV 220
LE QT G+ +P LR ++ + IPFV
Sbjct: 408 LENWQTPDGLVVPPALRPWMCGIEF-----IPFV 436
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 112/165 (67%), Gaps = 6/165 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFV +P + SW+ +D +I N+E FY L I Y VVNIVSG LN
Sbjct: 277 DTLGIFRVHQFEKVEQFVAVTPEGNASWEEMDRLIGNAEAFYQSLNIPYNVVNIVSGELN 336
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIE-FVHMLNAT 421
AAAKK DLEAWFP S RELVSCSNC YQSRRL +RYG +K EK + +VH+LN+T
Sbjct: 337 DAAAKKYDLEAWFPSSRTHRELVSCSNCTDYQSRRLEIRYGAPQKGPEKTKSYVHLLNST 396
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 466
AT R +C +LE QT G+ +P LR ++ + IPFV
Sbjct: 397 LTATERSLCCLLENWQTPDGLVVPPALRPWMCGIEF-----IPFV 436
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTYFH 586
E DDKYLIATSEQ C+ R WL E LPIR G STCFR+E + G+ R +
Sbjct: 228 EGDDKYLIATSEQTCCSYLRKLWLNEKDLPIRLSGYSTCFRKEVGSHGRDTLGIFRVHQF 287
Query: 587 VTCAQREGLLSE--ATSEEVDQ----ADPFY 611
Q + E A+ EE+D+ A+ FY
Sbjct: 288 EKVEQFVAVTPEGNASWEEMDRLIGNAEAFY 318
>gi|224006852|ref|XP_002292386.1| seryl-trna synthetase [Thalassiosira pseudonana CCMP1335]
gi|220972028|gb|EED90361.1| seryl-trna synthetase [Thalassiosira pseudonana CCMP1335]
Length = 499
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/257 (50%), Positives = 162/257 (63%), Gaps = 28/257 (10%)
Query: 7 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRD 66
KV + + +KYLIATSEQPICA H++ W+ + +LP RY G+STCFR+E GS GRD
Sbjct: 249 KVSGKTDDPENTSEKYLIATSEQPICAYHKNEWIDDKALPFRYAGISTCFRKEAGSSGRD 308
Query: 67 TRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 126
RGIFRVHQFEK+EQF + +ES K MI ++EFY LG YRVV IVSGALN
Sbjct: 309 IRGIFRVHQFEKIEQFCVVVDDFEESSKEQTRMIDAAKEFYESLGFPYRVVCIVSGALND 368
Query: 127 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ---------TKQKIY---- 173
AA KK DLEAWFPG A+RELVSCSNC DYQ+R + R GQ TK++I
Sbjct: 369 AAVKKYDLEAWFPGQQAYRELVSCSNCTDYQARGVGARCGQKKTDTNKSKTKEEILAERA 428
Query: 174 -------ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
AT CAT R IC +LE +Q E GVR+P+ L F+ + +PF + P+
Sbjct: 429 SYVHFLNATLCATGRGICCLLENYQEENGVRVPEVLVPFMGGIDF-----LPFER-GPM- 481
Query: 227 EEETKKQKKQKEGMKKK 243
E +K +KKQKE +K+
Sbjct: 482 -EMSKSEKKQKEHEQKQ 497
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 123/198 (62%), Gaps = 19/198 (9%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGIFRVHQFEK+EQF + +ES K MI ++EFY LG YRVV IVSGALN
Sbjct: 308 DIRGIFRVHQFEKIEQFCVVVDDFEESSKEQTRMIDAAKEFYESLGFPYRVVCIVSGALN 367
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKK-----------MNEK 411
AA KK DLEAWFPG A+RELVSCSNC YQ+R + R GQ K + E+
Sbjct: 368 DAAVKKYDLEAWFPGQQAYRELVSCSNCTDYQARGVGARCGQKKTDTNKSKTKEEILAER 427
Query: 412 IEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPI 471
+VH LNAT CAT R IC +LE +Q E GVR+P+ L F+ + +PF + P+
Sbjct: 428 ASYVHFLNATLCATGRGICCLLENYQEENGVRVPEVLVPFMGGIDF-----LPFER-GPM 481
Query: 472 DEEETKKQKKQKEGMKKK 489
E +K +KKQKE +K+
Sbjct: 482 --EMSKSEKKQKEHEQKQ 497
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 523 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
KV + + +KYLIATSEQPICA H++ W+ + +LP RY G+STCFR+E
Sbjct: 249 KVSGKTDDPENTSEKYLIATSEQPICAYHKNEWIDDKALPFRYAGISTCFRKEA 302
>gi|294896376|ref|XP_002775526.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
gi|239881749|gb|EER07342.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
Length = 470
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 153/224 (68%), Gaps = 16/224 (7%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YLIATSEQPI A HR W+ E LP+RY G+STCFR+E GSHG++T G++R+HQFEK+EQ
Sbjct: 254 YLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGSHGKETWGLYRIHQFEKLEQ 313
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F +T+P +ES M + M+ SEEFY L + YRVV IVSGALN AAAKK DLEAWFPG
Sbjct: 314 FCITTP--EESVAMHEHMLDMSEEFYQSLDLPYRVVKIVSGALNDAAAKKYDLEAWFPGY 371
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILETHQT 192
++ELVSCSNC DYQ+R + R G KQ + +T CAT R +C I+E +Q
Sbjct: 372 NMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTLCATERAMCCIVENYQE 431
Query: 193 ETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
E GVR+P R VP Y++ +P+VK P + +E KK +K+
Sbjct: 432 EEGVRVP---RVLVP--YMHGMEFLPYVKPIPKNPDEAKKAEKK 470
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 7/180 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
+T G++R+HQFEK+EQF +T+P +ES + M+ SEEFY L + YRVV IVSGALN
Sbjct: 298 ETWGLYRIHQFEKLEQFCITTP--EESVAMHEHMLDMSEEFYQSLDLPYRVVKIVSGALN 355
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPG ++ELVSCSNC YQ+R + R G K+ + +VHMLN+T
Sbjct: 356 DAAAKKYDLEAWFPGYNMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTL 415
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C I+E +Q E GVR+P R VP Y++ +P+VK P + +E KK +K+
Sbjct: 416 CATERAMCCIVENYQEEEGVRVP---RVLVP--YMHGMEFLPYVKPIPKNPDEAKKAEKK 470
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 486 MKKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQ 545
MKK ++ + A + + + + E + +E G E G+ YLIATSEQ
Sbjct: 212 MKKDIMAETAELGDFDEQLYKVSENSQQKKEEKGLKENDGEY----------YLIATSEQ 261
Query: 546 PICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
PI A HR W+ E LP+RY G+STCFR+E +
Sbjct: 262 PISAYHRKEWIDEDQLPLRYAGISTCFRKEAGS 294
>gi|254577065|ref|XP_002494519.1| ZYRO0A03410p [Zygosaccharomyces rouxii]
gi|238937408|emb|CAR25586.1| ZYRO0A03410p [Zygosaccharomyces rouxii]
Length = 459
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/227 (52%), Positives = 150/227 (66%), Gaps = 17/227 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P+ LP+RY G S+CFR+E G+HG+D GIFRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYAGYSSCFRREAGAHGKDAWGIFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF LT P ++SW+ D MI SEEFY L + YRVV IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFCLTEP--EKSWEEFDRMISLSEEFYQGLNLPYRVVGIVSGELNNAAAKKFDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C +L
Sbjct: 357 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCVL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +QTE G+ +P+ LRK++P E +PF+K P + K +K
Sbjct: 417 ENYQTEDGLVVPEVLRKYIPG----EPEFLPFIKELPKNSTSNKGKK 459
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 118/178 (66%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQF LT P ++SW+ D MI SEEFY L + YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFCLTEP--EKSWEEFDRMISLSEEFYQGLNLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKFDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R +C +LE +QTE G+ +P+ LRK++P E +PF+K P + K +K
Sbjct: 406 AATQRALCCVLENYQTEDGLVVPEVLRKYIPG----EPEFLPFIKELPKNSTSNKGKK 459
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 515 REVIGKGEKVGDSAPE----KDELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGV 568
+EV+GK ++ E D D+KYLIATSEQPI A H W P+ LP+RY G
Sbjct: 215 KEVMGKTAQLSQFDEELYKVMDGDDEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYAGY 274
Query: 569 STCFRQECDA 578
S+CFR+E A
Sbjct: 275 SSCFRREAGA 284
>gi|403158545|ref|XP_003319248.2| seryl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166353|gb|EFP74829.2| seryl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 450
Score = 236 bits (602), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/220 (58%), Positives = 152/220 (69%), Gaps = 18/220 (8%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D DDKYLIATSEQP+ A H D W P+ LP++Y G STCFR+E GSHGRDT GIFRV
Sbjct: 234 DGEDDKYLIATSEQPLSAYHSDEWFEKPKEQLPLKYAGYSTCFRKEAGSHGRDTWGIFRV 293
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEKVEQF +T P +SW+M +EM+QNSE+FY LG+ YR+V IVSGALN+AAAKK D
Sbjct: 294 HQFEKVEQFCITDP--SKSWEMFEEMVQNSEDFYQSLGLGYRLVGIVSGALNNAAAKKAD 351
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP G F+ELVS SNC DYQSR L VR G K QK+Y T CAT R +C
Sbjct: 352 LEAWFPSMGEFKELVSVSNCTDYQSRSLEVRCGVKKQGDTQKVYVHMLNGTLCATERALC 411
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
++E +QT G+ IP LR ++ +PFVK AP
Sbjct: 412 CLVENYQTPEGLLIPTVLRPYMQGREF-----LPFVKEAP 446
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 117/168 (69%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +T P +SW+ +EM+QNSE+FY LG+ YR+V IVSGALN
Sbjct: 286 DTWGIFRVHQFEKVEQFCITDP--SKSWEMFEEMVQNSEDFYQSLGLGYRLVGIVSGALN 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G F+ELVS SNC YQSR L VR G K+ + + +VHMLN T
Sbjct: 344 NAAAKKADLEAWFPSMGEFKELVSVSNCTDYQSRSLEVRCGVKKQGDTQKVYVHMLNGTL 403
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
CAT R +C ++E +QT G+ IP LR ++ +PFVK AP
Sbjct: 404 CATERALCCLVENYQTPEGLLIPTVLRPYMQGREF-----LPFVKEAP 446
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D DDKYLIATSEQP+ A H D W P+ LP++Y G STCFR+E +
Sbjct: 234 DGEDDKYLIATSEQPLSAYHSDEWFEKPKEQLPLKYAGYSTCFRKEAGS 282
>gi|294885387|ref|XP_002771305.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
gi|239874801|gb|EER03121.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
Length = 463
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 153/224 (68%), Gaps = 16/224 (7%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YLIATSEQPI A HR W+ E LP+RY G+STCFR+E GSHG++T G++R+HQFEK+EQ
Sbjct: 247 YLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGSHGKETWGLYRIHQFEKLEQ 306
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F +T+P +ES M + M+ SEEFY L + YRVV IVSGALN AAAKK DLEAWFPG
Sbjct: 307 FCITTP--EESVAMHEHMLDMSEEFYQSLDLPYRVVKIVSGALNDAAAKKYDLEAWFPGY 364
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILETHQT 192
++ELVSCSNC DYQ+R + R G KQ + +T CAT R +C I+E +Q
Sbjct: 365 NMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTLCATERAMCCIVENYQE 424
Query: 193 ETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
E GVR+P R VP Y++ +P+VK P + +E KK +K+
Sbjct: 425 EEGVRVP---RVLVP--YMHGMEFLPYVKPIPKNPDEAKKAEKK 463
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 7/180 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
+T G++R+HQFEK+EQF +T+P +ES + M+ SEEFY L + YRVV IVSGALN
Sbjct: 291 ETWGLYRIHQFEKLEQFCITTP--EESVAMHEHMLDMSEEFYQSLDLPYRVVKIVSGALN 348
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPG ++ELVSCSNC YQ+R + R G K+ + +VHMLN+T
Sbjct: 349 DAAAKKYDLEAWFPGYNMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTL 408
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C I+E +Q E GVR+P R VP Y++ +P+VK P + +E KK +K+
Sbjct: 409 CATERAMCCIVENYQEEEGVRVP---RVLVP--YMHGMEFLPYVKPIPKNPDEAKKAEKK 463
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
YLIATSEQPI A HR W+ E LP+RY G+STCFR+E +
Sbjct: 247 YLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGS 287
>gi|396495307|ref|XP_003844514.1| similar to seryl-trna synthetase [Leptosphaeria maculans JN3]
gi|312221094|emb|CBY01035.1| similar to seryl-trna synthetase [Leptosphaeria maculans JN3]
Length = 476
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 148/221 (66%), Gaps = 17/221 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQP+ +H + WL LPI+Y G ST FR+E GSHG+D GIFR+HQFEKV
Sbjct: 254 DKYLIATSEQPLSGLHSEEWLQAEDLPIKYAGYSTNFRKEAGSHGKDAWGIFRIHQFEKV 313
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF+LT P ++SW+ DEM+ SEEFY LG+ Y+VV IVSGALN+AAA K DLEAWFP
Sbjct: 314 EQFLLTHP--EKSWEAFDEMLATSEEFYQSLGLPYQVVAIVSGALNNAAAMKRDLEAWFP 371
Query: 140 --GSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILE 188
G G ++ELVS SNC DYQ+R L +R+G K + T CAT R +C ILE
Sbjct: 372 VTGGGEYKELVSISNCTDYQTRELEIRHGAKKLNATRKEYVHALNGTLCATERTLCCILE 431
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
+QT G +P LRK++P+ + +PFVK +EE
Sbjct: 432 NYQTPDGFTVPSVLRKYIPS----QPEFLPFVKEWKQSKEE 468
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 119/175 (68%), Gaps = 8/175 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFR+HQFEKVEQF+LT P ++SW+ DEM+ SEEFY LG+ Y+VV IVSGALN
Sbjct: 300 DAWGIFRIHQFEKVEQFLLTHP--EKSWEAFDEMLATSEEFYQSLGLPYQVVAIVSGALN 357
Query: 363 HAAAKKLDLEAWFP--GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
+AAA K DLEAWFP G G ++ELVS SNC YQ+R L +R+G K + E+VH LN
Sbjct: 358 NAAAMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGAKKLNATRKEYVHALNG 417
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
T CAT R +C ILE +QT G +P LRK++P+ + +PFVK +EE
Sbjct: 418 TLCATERTLCCILENYQTPDGFTVPSVLRKYIPS----QPEFLPFVKEWKQSKEE 468
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DKYLIATSEQP+ +H + WL LPI+Y G ST FR+E
Sbjct: 254 DKYLIATSEQPLSGLHSEEWLQAEDLPIKYAGYSTNFRKEA 294
>gi|343426728|emb|CBQ70256.1| probable serine-tRNA ligase, cytosolic [Sporisorium reilianum SRZ2]
Length = 452
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 148/226 (65%), Gaps = 18/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A+H D P LPIRY G STCFR+E GSHG+DT GIFRVHQF
Sbjct: 234 DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEAGSHGKDTWGIFRVHQF 293
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P SW ML++M+ NSEEFY L + Y VV IVSGALN+AAA K DLEA
Sbjct: 294 EKVEQFCITDPA--SSWDMLEQMLANSEEFYQSLQLPYHVVAIVSGALNNAAAMKYDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVR-----YGQTKQK----IYATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSRRL VR G TKQ + T CAT R +C ++
Sbjct: 352 WFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKQTFVHMLNGTLCATERALCCVV 411
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E QT G+RIP L+ Y+ +P+ + P + KK+
Sbjct: 412 ENWQTPDGLRIPPPLQP-----YMGGRDFLPYTRELPKNTTSQKKK 452
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 115/177 (64%), Gaps = 7/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +T P SW L++M+ NSEEFY L + Y VV IVSGALN
Sbjct: 283 DTWGIFRVHQFEKVEQFCITDPA--SSWDMLEQMLANSEEFYQSLQLPYHVVAIVSGALN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFP G ++ELVSCSNC YQSRRL VR G K + K FVHMLN T
Sbjct: 341 NAAAMKYDLEAWFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKQTFVHMLNGTL 400
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C ++E QT G+RIP L+ Y+ +P+ + P + KK+
Sbjct: 401 CATERALCCVVENWQTPDGLRIPPPLQP-----YMGGRDFLPYTRELPKNTTSQKKK 452
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
DDKYLIATSEQPI A+H D P LPIRY G STCFR+E
Sbjct: 234 DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEA 277
>gi|401839443|gb|EJT42670.1| SES1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 462
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 147/220 (66%), Gaps = 17/220 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H D W P+ LPI Y G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSDEWFEKPQEQLPIHYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +Q E G+ +P+ LRK++P E +PFV P
Sbjct: 414 CILENYQNEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 114/168 (67%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +Q E G+ +P+ LRK++P E +PFV P
Sbjct: 406 AATQRALCCILENYQNEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H D W P+ LPI Y G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHSDEWFEKPQEQLPIHYAGYSSCFRREAGS 284
>gi|294953303|ref|XP_002787696.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
gi|239902720|gb|EER19492.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus
ATCC 50983]
Length = 470
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 151/224 (67%), Gaps = 16/224 (7%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YLIATSEQPI A HR W+ E LP+RY G+STCFR+E GSHG++T G++R+HQFEK+EQ
Sbjct: 254 YLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGSHGKETWGLYRIHQFEKLEQ 313
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F +T+P +ES M + M+ +EEFY L + YRVV IVSGALN AAAKK DLEAWFPG
Sbjct: 314 FCITTP--EESVAMHEHMLDMAEEFYQSLDLPYRVVKIVSGALNDAAAKKYDLEAWFPGY 371
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILETHQT 192
++ELVSCSNC DYQ+R + R G KQ + +T CAT R +C I+E +Q
Sbjct: 372 NMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTLCATERAMCCIVENYQE 431
Query: 193 ETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
E GVR+P L F+ + +P+VK P + +E KK +K+
Sbjct: 432 EEGVRVPRVLVPFMHGMEF-----LPYVKPVPKNPDEGKKAEKK 470
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 120/180 (66%), Gaps = 7/180 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
+T G++R+HQFEK+EQF +T+P +ES + M+ +EEFY L + YRVV IVSGALN
Sbjct: 298 ETWGLYRIHQFEKLEQFCITTP--EESVAMHEHMLDMAEEFYQSLDLPYRVVKIVSGALN 355
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPG ++ELVSCSNC YQ+R + R G K+ + +VHMLN+T
Sbjct: 356 DAAAKKYDLEAWFPGYNMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTL 415
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C I+E +Q E GVR+P L F+ + +P+VK P + +E KK +K+
Sbjct: 416 CATERAMCCIVENYQEEEGVRVPRVLVPFMHGMEF-----LPYVKPVPKNPDEGKKAEKK 470
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 486 MKKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQ 545
MKK ++ + A + + + + E + +E G E G+ YLIATSEQ
Sbjct: 212 MKKDIMAETAELGDFDEQLYKVSENSQQKKEEKGLKENDGEY----------YLIATSEQ 261
Query: 546 PICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
PI A HR W+ E LP+RY G+STCFR+E +
Sbjct: 262 PISAYHRKEWIDEDQLPLRYAGISTCFRKEAGS 294
>gi|157929912|gb|ABW04144.1| Seryl-tRNA synthetase [Epinephelus coioides]
Length = 342
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 141/193 (73%), Gaps = 15/193 (7%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + LD+KYLIATSEQPI A R+ WL LP+RY G+STCFRQEV
Sbjct: 158 VIGKGSERSDDS----SLDEKYLIATSEQPIAAFLREEWLKPEDLPLRYAGISTCFRQEV 213
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI YR+VNIV
Sbjct: 214 GSHGRDTRGIFRVHQFEKIEQFVFSSPHDNKSWEMFDEMIGTAEEFYQSLGIPYRIVNIV 273
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACA-- 178
S ALNHAA+KKLDLEAWFPGS AFRELVS ++C DY R V + ++ +CA
Sbjct: 274 SRALNHAASKKLDLEAWFPGSSAFRELVS-AHCTDY---RPGVCASLRQTEMMTASCAHA 329
Query: 179 -----TTRVICAI 186
TTRVI I
Sbjct: 330 HAHVCTTRVIWRI 342
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 93/130 (71%), Gaps = 6/130 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI YR+VNIVS ALN
Sbjct: 219 DTRGIFRVHQFEKIEQFVFSSPHDNKSWEMFDEMIGTAEEFYQSLGIPYRIVNIVSRALN 278
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGS AFRELVS ++C Y+ + QT+ M H A
Sbjct: 279 HAASKKLDLEAWFPGSSAFRELVS-AHCTDYRP-GVCASLRQTEMMTASCAHAH---AHV 333
Query: 423 CATTRVICAI 432
C TTRVI I
Sbjct: 334 C-TTRVIWRI 342
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + LD+KYLIATSEQPI A R+ WL LP+
Sbjct: 145 VAQLSQFDEELYKVIGKGSERSDDS----SLDEKYLIATSEQPIAAFLREEWLKPEDLPL 200
Query: 564 RYLGVSTCFRQECDA 578
RY G+STCFRQE +
Sbjct: 201 RYAGISTCFRQEVGS 215
>gi|353236085|emb|CCA68087.1| probable serine-tRNA ligase, cytosolic [Piriformospora indica DSM
11827]
Length = 452
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 153/227 (67%), Gaps = 19/227 (8%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
DE+D KYLIATSEQPI A H + W P LP+RY G STCFR+E GS GRD GIFRV
Sbjct: 234 DEID-KYLIATSEQPISAYHMNEWFEAPAKDLPLRYGGYSTCFRKEAGSSGRDVWGIFRV 292
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEKVEQF +T P ++SW+M +EM+ NSE FY LG+ YR+V IVSGALN AAAKK D
Sbjct: 293 HQFEKVEQFCITEP--EKSWEMFEEMVGNSEAFYQSLGLPYRLVAIVSGALNLAAAKKYD 350
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP A++ELVS SNC DYQSR+L VR G K +K+Y T CAT R +C
Sbjct: 351 LEAWFPYQQAYKELVSTSNCTDYQSRKLEVRCGLKKTGDTKKVYVHMLNGTLCATERALC 410
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
++E +QT G+RIP+ L+ Y+ +PF++ P + + K
Sbjct: 411 CLVENYQTPEGLRIPEVLQP-----YMGGKDFLPFIRELPKNYQRKK 452
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 118/175 (67%), Gaps = 7/175 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQF +T P ++SW+ +EM+ NSE FY LG+ YR+V IVSGALN
Sbjct: 285 DVWGIFRVHQFEKVEQFCITEP--EKSWEMFEEMVGNSEAFYQSLGLPYRLVAIVSGALN 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP A++ELVS SNC YQSR+L VR G K + K +VHMLN T
Sbjct: 343 LAAAKKYDLEAWFPYQQAYKELVSTSNCTDYQSRKLEVRCGLKKTGDTKKVYVHMLNGTL 402
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
CAT R +C ++E +QT G+RIP+ L+ Y+ +PF++ P + + K
Sbjct: 403 CATERALCCLVENYQTPEGLRIPEVLQP-----YMGGKDFLPFIRELPKNYQRKK 452
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
DE+D KYLIATSEQPI A H + W P LP+RY G STCFR+E +
Sbjct: 234 DEID-KYLIATSEQPISAYHMNEWFEAPAKDLPLRYGGYSTCFRKEAGS 281
>gi|388851393|emb|CCF54978.1| probable serine-tRNA ligase, cytosolic [Ustilago hordei]
Length = 452
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 149/226 (65%), Gaps = 18/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A+H D P LPIRY G STCFR+E GSHG+DT GIFRVHQF
Sbjct: 234 DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEAGSHGKDTWGIFRVHQF 293
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +T P SW ML++M+ NSEEFY L + Y VV IVSGALN+AAA K DLEA
Sbjct: 294 EKIEQFCITDPA--SSWDMLEQMLTNSEEFYQSLQLPYHVVAIVSGALNNAAAMKYDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVR-----YGQTKQK----IYATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSRRL VR G TKQ + T CAT R +C ++
Sbjct: 352 WFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKQTFVHMLNGTLCATERALCCVV 411
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E QT G++IP L+ Y+ +P+V+ P + KK+
Sbjct: 412 ENWQTPEGLKIPPPLQP-----YMGGRDFLPWVRELPKNTTSQKKK 452
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 116/177 (65%), Gaps = 7/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P SW L++M+ NSEEFY L + Y VV IVSGALN
Sbjct: 283 DTWGIFRVHQFEKIEQFCITDPA--SSWDMLEQMLTNSEEFYQSLQLPYHVVAIVSGALN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFP G ++ELVSCSNC YQSRRL VR G K + K FVHMLN T
Sbjct: 341 NAAAMKYDLEAWFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKQTFVHMLNGTL 400
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C ++E QT G++IP L+ Y+ +P+V+ P + KK+
Sbjct: 401 CATERALCCVVENWQTPEGLKIPPPLQP-----YMGGRDFLPWVRELPKNTTSQKKK 452
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
DDKYLIATSEQPI A+H D P LPIRY G STCFR+E
Sbjct: 234 DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEA 277
>gi|401626353|gb|EJS44303.1| ses1p [Saccharomyces arboricola H-6]
Length = 462
Score = 233 bits (595), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 151/229 (65%), Gaps = 17/229 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P+ LPI Y G S+CFR+E GSHG+D G+FRVH F
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYAGYSSCFRREAGSHGKDAWGVFRVHAF 298
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVL P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK DLEA
Sbjct: 299 EKIEQFVLAEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEA 356
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C +L
Sbjct: 357 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCVL 416
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
E +QTE G+ +P+ LRK++P E +PFV P + +K + K+
Sbjct: 417 ENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELPKNSTSSKDKNKK 461
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 6/180 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFVL P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVLAEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
AT R +C +LE +QTE G+ +P+ LRK++P E +PFV P + +K + K+
Sbjct: 406 AATQRALCCVLENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELPKNSTSSKDKNKK 461
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H W P+ LPI Y G S+CFR+E +
Sbjct: 239 DEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYAGYSSCFRREAGS 284
>gi|443895576|dbj|GAC72922.1| seryl-trna synthetase [Pseudozyma antarctica T-34]
Length = 452
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 148/226 (65%), Gaps = 18/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A+H D P LPIRY G STCFR+E GSHG+DT GIFRVHQF
Sbjct: 234 DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEAGSHGKDTWGIFRVHQF 293
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P SW+ML++M+ NSEEFY L + Y VV IVSGALN+AAA K DLEA
Sbjct: 294 EKVEQFCITDPA--SSWEMLEQMLANSEEFYQSLQLPYHVVAIVSGALNNAAAAKYDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSRRL VR G K + T CAT R +C ++
Sbjct: 352 WFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKPTFVHMLNGTLCATERALCCVV 411
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E QT G++IP L+ Y+ +P+++ P + KK+
Sbjct: 412 ENWQTPDGLKIPPPLQP-----YMGGRDFLPYLRELPKNTTSQKKK 452
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 117/177 (66%), Gaps = 7/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +T P SW+ L++M+ NSEEFY L + Y VV IVSGALN
Sbjct: 283 DTWGIFRVHQFEKVEQFCITDPA--SSWEMLEQMLANSEEFYQSLQLPYHVVAIVSGALN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFP G ++ELVSCSNC YQSRRL VR G K + K FVHMLN T
Sbjct: 341 NAAAAKYDLEAWFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKPTFVHMLNGTL 400
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C ++E QT G++IP L+ Y+ +P+++ P + KK+
Sbjct: 401 CATERALCCVVENWQTPDGLKIPPPLQP-----YMGGRDFLPYLRELPKNTTSQKKK 452
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
DDKYLIATSEQPI A+H D P LPIRY G STCFR+E
Sbjct: 234 DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEA 277
>gi|6320226|ref|NP_010306.1| serine--tRNA ligase SES1 [Saccharomyces cerevisiae S288c]
gi|1711650|sp|P07284.2|SYSC_YEAST RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|642295|emb|CAA87802.1| Ses1p [Saccharomyces cerevisiae]
gi|1216231|emb|CAA65216.1| seryl-tRNA synthetase [Saccharomyces cerevisiae]
gi|1431454|emb|CAA98844.1| SES1 [Saccharomyces cerevisiae]
gi|151942011|gb|EDN60367.1| seryl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
gi|190405003|gb|EDV08270.1| serine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
gi|256273249|gb|EEU08192.1| Ses1p [Saccharomyces cerevisiae JAY291]
gi|285811045|tpg|DAA11869.1| TPA: serine--tRNA ligase SES1 [Saccharomyces cerevisiae S288c]
gi|323334270|gb|EGA75652.1| Ses1p [Saccharomyces cerevisiae AWRI796]
gi|323355800|gb|EGA87614.1| Ses1p [Saccharomyces cerevisiae VL3]
gi|349577093|dbj|GAA22262.1| K7_Ses1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300137|gb|EIW11228.1| Ses1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 462
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 148/220 (67%), Gaps = 17/220 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E GSHG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 414 CILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 115/168 (68%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 406 AATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
>gi|259145268|emb|CAY78532.1| Ses1p [Saccharomyces cerevisiae EC1118]
gi|365766535|gb|EHN08031.1| Ses1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 462
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 148/220 (67%), Gaps = 17/220 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E GSHG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 414 CILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 115/168 (68%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 406 AATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
>gi|4458|emb|CAA28572.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 462
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 148/220 (67%), Gaps = 17/220 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E GSHG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 414 CILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 115/168 (68%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 406 AATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
>gi|323338341|gb|EGA79569.1| Ses1p [Saccharomyces cerevisiae Vin13]
Length = 462
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 148/220 (67%), Gaps = 17/220 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E GSHG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 414 CILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 115/168 (68%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 406 AATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
>gi|219128753|ref|XP_002184570.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404020|gb|EEC43969.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 462
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 151/240 (62%), Gaps = 20/240 (8%)
Query: 7 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRD 66
KV + D +KYLIATSEQPICA H+ W+ +LP+RY G+STCFR+E GS G+D
Sbjct: 222 KVSGKTDDPDGATEKYLIATSEQPICAYHKGDWIDPKTLPLRYAGISTCFRKEAGSSGKD 281
Query: 67 TRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 126
RGIFRVHQFEKVEQF LT + S M+Q +++FY LG+ YRVV +VSG LN
Sbjct: 282 IRGIFRVHQFEKVEQFCLTVDDFEISQAEQKRMLQAAKDFYESLGVGYRVVCLVSGELND 341
Query: 127 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATA---------- 176
AA KK DLE WFPG +RELVSCSNC DYQ+R + VR G + + TA
Sbjct: 342 AAVKKYDLEGWFPGQNTYRELVSCSNCTDYQARGVGVRCGNKTKSMDLTARASYVHMLNS 401
Query: 177 --CATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
CAT R IC +LET+QTETGV +P+ LR F+ +PFV+ P E TK +K
Sbjct: 402 TLCATGRGICCLLETYQTETGVVVPEVLRPFMGGTDF-----MPFVRGPP---EMTKGEK 453
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 119/181 (65%), Gaps = 11/181 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGIFRVHQFEKVEQF LT + S M+Q +++FY LG+ YRVV +VSG LN
Sbjct: 281 DIRGIFRVHQFEKVEQFCLTVDDFEISQAEQKRMLQAAKDFYESLGVGYRVVCLVSGELN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG-QTKKMN--EKIEFVHMLN 419
AA KK DLE WFPG +RELVSCSNC YQ+R + VR G +TK M+ + +VHMLN
Sbjct: 341 DAAVKKYDLEGWFPGQNTYRELVSCSNCTDYQARGVGVRCGNKTKSMDLTARASYVHMLN 400
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
+T CAT R IC +LET+QTETGV +P+ LR F+ +PFV+ P E TK +
Sbjct: 401 STLCATGRGICCLLETYQTETGVVVPEVLRPFMGGTDF-----MPFVRGPP---EMTKGE 452
Query: 480 K 480
K
Sbjct: 453 K 453
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 523 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
KV + D +KYLIATSEQPICA H+ W+ +LP+RY G+STCFR+E
Sbjct: 222 KVSGKTDDPDGATEKYLIATSEQPICAYHKGDWIDPKTLPLRYAGISTCFRKEA 275
>gi|195437777|ref|XP_002066816.1| GK24351 [Drosophila willistoni]
gi|194162901|gb|EDW77802.1| GK24351 [Drosophila willistoni]
Length = 1001
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 127/189 (67%), Gaps = 40/189 (21%)
Query: 680 FQLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCS 739
QL SK +CCVCLGERSDDVNEIVECDSCGV+VHEGCYGV D SISST S+CS
Sbjct: 123 LQLNQLSKAPAKRMCCVCLGERSDDVNEIVECDSCGVSVHEGCYGVSDNVSISSTNSTCS 182
Query: 740 TEPWFCESCRAGIAEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSS 799
TEPWFCE+CRAG+ EP CELCPN
Sbjct: 183 TEPWFCEACRAGVTEPDCELCPN------------------------------------- 205
Query: 800 DGDRGGIFKETDVGKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDE 859
RGGI+KETDVGKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC +
Sbjct: 206 ---RGGIYKETDVGKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCENS 262
Query: 860 SYARTELAL 868
+ART + +
Sbjct: 263 LFARTGVCI 271
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 78/123 (63%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K ++ PWVPTQK++R LT+SA+ CR LL KA M VD + Q +
Sbjct: 357 QRKLQKIQSKYSQHKRMKPLPWVPTQKMSRLLTTSASACRRLLAKAETMSVDVHYLEQRE 416
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + L D+ KKWHI AFNVEF AY+++R R+ ++Q+ L V N +L +Q L+
Sbjct: 417 AHINALTDIRKKWHIAPAFNVEFTAYYMDRLKRMEDFRQQQQKLIVHNATLSKDQDLLRA 476
Query: 1012 TYD 1014
YD
Sbjct: 477 QYD 479
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 273 CDAGMCKTYFHVTCAQEAGFLIEAHHED-DAADPFYAHCKVHSEK 316
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
CG+C +D H + KCDTC+L+YHL CL+PPL R PKK+K GW
Sbjct: 600 CGICKRQNDQHLLVKCDTCNLHYHLGCLNPPLTRPPKKSKQYGW 643
Score = 43.5 bits (101), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
C +C S + + CD CH +YH ACL+PPL + PK
Sbjct: 944 CCVCSESGKTNQVVTCDECHKHYHFACLEPPLKKSPK 980
>gi|119182668|ref|XP_001242456.1| hypothetical protein CIMG_06352 [Coccidioides immitis RS]
Length = 465
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 149/221 (67%), Gaps = 23/221 (10%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E GSHG+D GIF
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIF--- 286
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
+QF+LT P +ESWK D+MI SEEFY LG+ Y++V+IVSGALN+AA+KK DL
Sbjct: 287 -----QQFILTKP--EESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDL 339
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQSR L +R+G K +K Y AT CAT R +C
Sbjct: 340 EAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCC 399
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 400 ILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 436
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 14/170 (8%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIF +QF+LT P +ESWKT D+MI SEEFY LG+ Y++V+IVSGALN
Sbjct: 281 DAWGIF--------QQFILTKP--EESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALN 330
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP G ++ELVSCSNC YQSR L +R+G K + K +VH LNAT
Sbjct: 331 NAASKKWDLEAWFPFQGEYKELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATL 390
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
CAT R +C ILE +Q E G+ +P+ LRK++P + +P+ K P D
Sbjct: 391 CATERALCCILENYQQEDGIIVPEVLRKYIPG----QPEFLPYTKELPKD 436
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ DKYLIATSEQP+ A+H WL + LPI+Y G STCFR+E
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEA 275
>gi|430813441|emb|CCJ29214.1| unnamed protein product [Pneumocystis jirovecii]
Length = 605
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 149/217 (68%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H + W P LPI+Y G S+C+R+E G+HG+DT GIFRVHQF
Sbjct: 175 DEKYLIATSEQPISAFHSNEWFETPNEQLPIKYAGYSSCYRREAGAHGKDTWGIFRVHQF 234
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+EQF++TSP + SW M +EMI +EEFY L + YR+V+IVSGALN+AA+KK DLEA
Sbjct: 235 DKIEQFLITSP--ESSWIMFEEMISVAEEFYMSLKLPYRIVSIVSGALNNAASKKYDLEA 292
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K+K Y AT CA TR +C IL
Sbjct: 293 WFPFQSEYKELVSCSNCTDYQSRNLEIRCGIKRLGDKEKKYVHCLNATLCAVTRALCCIL 352
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+ IP+ L+ Y+ +PF K+ P
Sbjct: 353 ENYQTPDGLDIPEPLQS-----YMGGKTFLPFTKSLP 384
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 117/168 (69%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQF+K+EQF++TSP + SW +EMI +EEFY L + YR+V+IVSGALN
Sbjct: 224 DTWGIFRVHQFDKIEQFLITSP--ESSWIMFEEMISVAEEFYMSLKLPYRIVSIVSGALN 281
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLEAWFP ++ELVSCSNC YQSR L +R G + +++ ++VH LNAT
Sbjct: 282 NAASKKYDLEAWFPFQSEYKELVSCSNCTDYQSRNLEIRCGIKRLGDKEKKYVHCLNATL 341
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
CA TR +C ILE +QT G+ IP+ L+ Y+ +PF K+ P
Sbjct: 342 CAVTRALCCILENYQTPDGLDIPEPLQS-----YMGGKTFLPFTKSLP 384
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 18/97 (18%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRTY-- 584
D+KYLIATSEQPI A H + W P LPI+Y G S+C+R+E A G+ R +
Sbjct: 175 DEKYLIATSEQPISAFHSNEWFETPNEQLPIKYAGYSSCYRREAGAHGKDTWGIFRVHQF 234
Query: 585 -----FHVTCAQREGLLSEATSEEVDQADPFYAHCRL 616
F +T + ++ E E + A+ FY +L
Sbjct: 235 DKIEQFLITSPESSWIMFE---EMISVAEEFYMSLKL 268
>gi|440487436|gb|ELQ67225.1| seryl-tRNA synthetase [Magnaporthe oryzae P131]
Length = 478
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 141/208 (67%), Gaps = 18/208 (8%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI H + WL LP+RY G STCFR+E G HGRD G FRVHQFEKV
Sbjct: 233 DKYLIATSEQPISVYHANEWLLPQDLPLRYAGYSTCFRKEAGGHGRDVWGTFRVHQFEKV 292
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M DEMI NSEEFY LG+ YR+V IVSGALN+AAAKK DLEAWFP
Sbjct: 293 EQFCITEP--EKSWEMFDEMIANSEEFYKALGLPYRIVAIVSGALNNAAAKKFDLEAWFP 350
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACATTRVICAILETHQTETGVRIP 199
G ++ELVSCSNC + L +T AT+R +CA+LE +QTE G ++P
Sbjct: 351 FQGEYKELVSCSNCTKKEYVHCL----------NSTLTATSRTMCALLENYQTEDGFKVP 400
Query: 200 DCLRKFVPAVYLNEAGE-IPFVKTAPID 226
+ LRK++P A E IPF K P D
Sbjct: 401 EPLRKYLPG-----APEFIPFTKELPKD 423
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 114/171 (66%), Gaps = 27/171 (15%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G FRVHQFEKVEQF +T P ++SW+ DEMI NSEEFY LG+ YR+V IVSGALN
Sbjct: 279 DVWGTFRVHQFEKVEQFCITEP--EKSWEMFDEMIANSEEFYKALGLPYRIVAIVSGALN 336
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC TKK E+VH LN+T
Sbjct: 337 NAAAKKFDLEAWFPFQGEYKELVSCSNC--------------TKK-----EYVHCLNSTL 377
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPID 472
AT+R +CA+LE +QTE G ++P+ LRK++P A E IPF K P D
Sbjct: 378 TATSRTMCALLENYQTEDGFKVPEPLRKYLPG-----APEFIPFTKELPKD 423
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DKYLIATSEQPI H + WL LP+RY G STCFR+E
Sbjct: 233 DKYLIATSEQPISVYHANEWLLPQDLPLRYAGYSTCFRKEA 273
>gi|323309504|gb|EGA62715.1| Ses1p [Saccharomyces cerevisiae FostersO]
Length = 250
Score = 232 bits (591), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 148/220 (67%), Gaps = 17/220 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E GSHG+D G+FRV
Sbjct: 24 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRV 83
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 84 HAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 141
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 142 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 201
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 202 CILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 237
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 115/168 (68%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 76 DAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 133
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 134 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 193
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 194 AATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 237
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E +
Sbjct: 24 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 72
>gi|323305586|gb|EGA59327.1| Ses1p [Saccharomyces cerevisiae FostersB]
Length = 250
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 148/220 (67%), Gaps = 17/220 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E GSHG+D G+FRV
Sbjct: 24 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRV 83
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 84 HAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 141
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 142 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 201
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 202 CILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 237
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 115/168 (68%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 76 DAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 133
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 134 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 193
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 194 AATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 237
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E +
Sbjct: 24 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 72
>gi|213410144|ref|XP_002175842.1| seryl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
gi|212003889|gb|EEB09549.1| seryl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
Length = 451
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 150/227 (66%), Gaps = 18/227 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
+++YL ATSEQPI A H + W P LPI+Y G STC+R+E GSHGRD GIFRVH F
Sbjct: 231 EERYLAATSEQPISAFHSNEWFEQPAEQLPIKYAGFSTCYRREAGSHGRDAWGIFRVHAF 290
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF+LT P ++SW+ DEMI ++EEFY L + YRVV IVSG LN+AAAKK DLEA
Sbjct: 291 EKIEQFLLTEP--EKSWEAFDEMIGHAEEFYKSLELPYRVVAIVSGELNNAAAKKYDLEA 348
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSR L +R G K +K Y +T CAT R IC IL
Sbjct: 349 WFPYQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGAREKKYVHCLNSTLCATERAICCIL 408
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E +QT G+ +P L+ Y+ +PF K P + +K++K
Sbjct: 409 ENYQTPEGLNVPKVLQP-----YMGGKTFLPFTKELPKNSTSSKQKK 450
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQF+LT P ++SW+ DEMI ++EEFY L + YRVV IVSG LN
Sbjct: 280 DAWGIFRVHAFEKIEQFLLTEP--EKSWEAFDEMIGHAEEFYKSLELPYRVVAIVSGELN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +R G K + ++VH LN+T
Sbjct: 338 NAAAKKYDLEAWFPYQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGAREKKYVHCLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
CAT R IC ILE +QT G+ +P L+ Y+ +PF K P + +K++K
Sbjct: 398 CATERAICCILENYQTPEGLNVPKVLQP-----YMGGKTFLPFTKELPKNSTSSKQKK 450
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRTYFH 586
+++YL ATSEQPI A H + W P LPI+Y G STC+R+E + G+ R H
Sbjct: 231 EERYLAATSEQPISAFHSNEWFEQPAEQLPIKYAGFSTCYRREAGSHGRDAWGIFRV--H 288
Query: 587 VTCAQREGLLS------EATSEEVDQADPFYAHCRL 616
+ LL+ EA E + A+ FY L
Sbjct: 289 AFEKIEQFLLTEPEKSWEAFDEMIGHAEEFYKSLEL 324
>gi|385302569|gb|EIF46695.1| seryl-trna synthetase [Dekkera bruxellensis AWRI1499]
Length = 460
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 147/226 (65%), Gaps = 17/226 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI A H W P LP+RY G+S CFR+E G+HG+D GIFRVH F
Sbjct: 241 DEKYLIATSEQPISAYHSGEWFERPSEQLPVRYAGLSQCFRREAGAHGKDAWGIFRVHTF 300
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF L P D+SW+ + MI SE+FY L + YRVV IVSG LN+AAAKK DLEA
Sbjct: 301 EKIEQFCLAEP--DKSWEEFNRMIGISEDFYKSLKLPYRVVGIVSGELNNAAAKKYDLEA 358
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG----QTKQKIY-----ATACATTRVICAIL 187
WFP ++ELVSCSNC DYQSR L +R G K+K Y +T CAT R +C IL
Sbjct: 359 WFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKTANQKEKKYVHCLNSTLCATERCLCCIL 418
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
E +QT G+ IP+ LR ++P + IPFVK P + KK+
Sbjct: 419 ENYQTPDGLMIPEVLRDYIPG----KPEFIPFVKELPKNSTSNKKK 460
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 115/177 (64%), Gaps = 6/177 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQF L P D+SW+ + MI SE+FY L + YRVV IVSG LN
Sbjct: 290 DAWGIFRVHTFEKIEQFCLAEP--DKSWEEFNRMIGISEDFYKSLKLPYRVVGIVSGELN 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ ++VH LN+T
Sbjct: 348 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKTANQKEKKYVHCLNSTL 407
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQ 479
CAT R +C ILE +QT G+ IP+ LR ++P + IPFVK P + KK+
Sbjct: 408 CATERCLCCILENYQTPDGLMIPEVLRDYIPG----KPEFIPFVKELPKNSTSNKKK 460
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D+KYLIATSEQPI A H W P LP+RY G+S CFR+E A
Sbjct: 241 DEKYLIATSEQPISAYHSGEWFERPSEQLPVRYAGLSQCFRREAGA 286
>gi|145349865|ref|XP_001419347.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579578|gb|ABO97640.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 435
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 140/213 (65%), Gaps = 15/213 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIATSEQ C+ R WL LPIR+ G STCFR+EVGSHGRDT GIFRVHQF
Sbjct: 228 EGDDKYLIATSEQTCCSYLRKRWLNTNQLPIRFAGYSTCFRKEVGSHGRDTLGIFRVHQF 287
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV S + SW ++ +I NSE FY L I Y+VVNIVSG LN AAAKK DLEA
Sbjct: 288 EKVEQFVAVSGEGNASWDEMERLIGNSEAFYQSLNIPYQVVNIVSGELNDAAAKKYDLEA 347
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIY-----ATACATTRVICAI 186
WFP S FRELVSCSNC DYQSRRL +R G K +K Y +T AT R +C +
Sbjct: 348 WFPSSRTFRELVSCSNCTDYQSRRLEIREGAPKKGPENKKAYVHLLNSTLTATERTLCCL 407
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPF 219
+E QT G+ +P LR ++ + IPF
Sbjct: 408 IENWQTPEGLVVPPALRPWMNGIEF-----IPF 435
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 109/164 (66%), Gaps = 6/164 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFV S + SW ++ +I NSE FY L I Y+VVNIVSG LN
Sbjct: 277 DTLGIFRVHQFEKVEQFVAVSGEGNASWDEMERLIGNSEAFYQSLNIPYQVVNIVSGELN 336
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-KIEFVHMLNAT 421
AAAKK DLEAWFP S FRELVSCSNC YQSRRL +R G KK E K +VH+LN+T
Sbjct: 337 DAAAKKYDLEAWFPSSRTFRELVSCSNCTDYQSRRLEIREGAPKKGPENKKAYVHLLNST 396
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 465
AT R +C ++E QT G+ +P LR ++ + IPF
Sbjct: 397 LTATERTLCCLIENWQTPEGLVVPPALRPWMNGIEF-----IPF 435
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 30/44 (68%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDKYLIATSEQ C+ R WL LPIR+ G STCFR+E
Sbjct: 228 EGDDKYLIATSEQTCCSYLRKRWLNTNQLPIRFAGYSTCFRKEV 271
>gi|365761570|gb|EHN03215.1| Ses1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 251
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 146/220 (66%), Gaps = 17/220 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI Y G S+CFR+E GSHG+D GIFRV
Sbjct: 25 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYAGYSSCFRREAGSHGKDAWGIFRV 84
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 85 HAFEKIEQFVLTEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 142
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 143 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 202
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +Q E G+ +P+ LRK++P E +PFV P
Sbjct: 203 CILENYQNEDGLVVPEVLRKYIPG----EPEFLPFVNELP 238
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 114/168 (67%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 77 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 134
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 135 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 194
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +Q E G+ +P+ LRK++P E +PFV P
Sbjct: 195 AATQRALCCILENYQNEDGLVVPEVLRKYIPG----EPEFLPFVNELP 238
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI Y G S+CFR+E +
Sbjct: 25 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYAGYSSCFRREAGS 73
>gi|90076434|dbj|BAE87897.1| unnamed protein product [Macaca fascicularis]
Length = 175
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/158 (70%), Positives = 130/158 (82%), Gaps = 3/158 (1%)
Query: 333 LDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLA 392
+EMI +EEFY LGI Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC
Sbjct: 2 FEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTD 61
Query: 393 YQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 452
YQ+RRL +RYGQTKKM +K+EFVHMLNAT CATTR ICAILE +QTE G+ +P+ L++F+
Sbjct: 62 YQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFM 121
Query: 453 PAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKV 490
P + E IPFVK APID+E +KKQKKQ EG KKKV
Sbjct: 122 PP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKKV 156
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/159 (64%), Positives = 122/159 (76%), Gaps = 12/159 (7%)
Query: 95 MLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCL 154
M +EMI +EEFY LGI Y +VNIVSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC
Sbjct: 1 MFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCT 60
Query: 155 DYQSRRLLVRYGQTKQ---------KIYATACATTRVICAILETHQTETGVRIPDCLRKF 205
DYQ+RRL +RYGQTK+ + AT CATTR ICAILE +QTE G+ +P+ L++F
Sbjct: 61 DYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEF 120
Query: 206 VPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKL 244
+P L E IPFVK APID+E +KKQKKQ EG KKK+
Sbjct: 121 MPP-GLQEL--IPFVKPAPIDQEPSKKQKKQHEGSKKKV 156
>gi|323454091|gb|EGB09961.1| hypothetical protein AURANDRAFT_23294, partial [Aureococcus
anophagefferens]
Length = 440
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 144/215 (66%), Gaps = 14/215 (6%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +KYLIATSEQPICA H+ WL EA LP+RY G+STCFR+E GSHGRDT GIFRVHQ
Sbjct: 229 DADSEKYLIATSEQPICAYHKGEWLKEADLPLRYAGISTCFRKEAGSHGRDTWGIFRVHQ 288
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEKVEQF +T +ES KM +EM +EE+ LG Y VVNIVSG LN+AA KK DLE
Sbjct: 289 FEKVEQFCITVGDLEESAKMHEEMKDLAEEYVQSLGFPYHVVNIVSGELNNAAIKKYDLE 348
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAI 186
AWFP FRELVSCSNC DYQSR + +R G K +K Y +T A R IC +
Sbjct: 349 AWFPFQKQFRELVSCSNCTDYQSRAMEIRCGNKKMGEREKKYVHMLNSTLAACGRTICCL 408
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
LE +QT TGV +P+ L ++ + +PFV+
Sbjct: 409 LENNQTPTGVHVPEVLWPYMDGLTF-----LPFVR 438
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 107/165 (64%), Gaps = 5/165 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +T +ES K +EM +EE+ LG Y VVNIVSG LN
Sbjct: 279 DTWGIFRVHQFEKVEQFCITVGDLEESAKMHEEMKDLAEEYVQSLGFPYHVVNIVSGELN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA KK DLEAWFP FRELVSCSNC YQSR + +R G K + ++VHMLN+T
Sbjct: 339 NAAIKKYDLEAWFPFQKQFRELVSCSNCTDYQSRAMEIRCGNKKMGEREKKYVHMLNSTL 398
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
A R IC +LE +QT TGV +P+ L ++ + +PFV+
Sbjct: 399 AACGRTICCLLENNQTPTGVHVPEVLWPYMDGLTF-----LPFVR 438
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 139/320 (43%), Gaps = 58/320 (18%)
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
TA + + ++ ++ E GVR+ F V V + A I+ + +K
Sbjct: 140 TAAHSHHELLYMIGGYEPERGVRVAGHRAYFFTDVGV-------MLNQAVINYGISFLRK 192
Query: 481 KQKEGMKKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLI 540
+ + M+ ++++ ++ +A E + AL +V G GD+ EK YLI
Sbjct: 193 RAYKVMQPPYMMNKDVMAG----VAQLSEFDEALYKVSG-----GDADSEK------YLI 237
Query: 541 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEAT 600
ATSEQPICA H+ WL EA LP+RY G+STCFR+E + T+ G+
Sbjct: 238 ATSEQPICAYHKGEWLKEADLPLRYAGISTCFRKEAGSHGRDTW---------GIFRVHQ 288
Query: 601 SEEVDQADPFYAHCRLHADKLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEV 660
E+V+Q C D LE+ +K + E D E V+ S G H V
Sbjct: 289 FEKVEQ------FCITVGD-LEESAKMHE---------EMKDLAEEYVQ--SLGFPYHVV 330
Query: 661 KIQQEFLAIKFLIRY-LLFWFQLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVH 719
I L + +Y L WF + +F +++ C C +S + + C + +
Sbjct: 331 NIVSGELNNAAIKKYDLEAWFPFQ--KQFRELVSCSNCTDYQSRAME--IRCGNKKMGER 386
Query: 720 EGCYGVQDTASISSTVSSCS 739
E Y ++ST+++C
Sbjct: 387 EKKY----VHMLNSTLAACG 402
>gi|401413660|ref|XP_003886277.1| putative seryl-tRNA synthetase [Neospora caninum Liverpool]
gi|325120697|emb|CBZ56252.1| putative seryl-tRNA synthetase [Neospora caninum Liverpool]
Length = 480
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/235 (54%), Positives = 157/235 (66%), Gaps = 24/235 (10%)
Query: 14 EKD-ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFR 72
EKD + DD +LIATSEQP+C++H L E LPIRY G S+CFR+E GSHG+D GIFR
Sbjct: 253 EKDADRDDLFLIATSEQPLCSLHMGETLEEKELPIRYAGYSSCFRKEAGSHGKDCWGIFR 312
Query: 73 VHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKL 132
+HQFEKVEQF +T+P +ESWKM ++MI +EEFY L + YRVV+IVSGALN AAAKK
Sbjct: 313 IHQFEKVEQFCITTP--EESWKMHEDMIGAAEEFYQSLELPYRVVSIVSGALNDAAAKKY 370
Query: 133 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKQK------IYATACA 178
DLEAWFPG +RELVSCSNC DYQSR L +R G K + + T A
Sbjct: 371 DLEAWFPGYEDYRELVSCSNCTDYQSRALDIRLAHKASTAKGADKNEKGHVHMLNGTLVA 430
Query: 179 TTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
T R +C ILE +QT GV++P R VP Y+ A +PFV+ A EE KK+
Sbjct: 431 TQRCLCCILENYQTPLGVKVP---RVLVP--YMGGAEFLPFVEGA--GEESVKKE 478
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 121/182 (66%), Gaps = 14/182 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFR+HQFEKVEQF +T+P +ESWK ++MI +EEFY L + YRVV+IVSGALN
Sbjct: 306 DCWGIFRIHQFEKVEQFCITTP--EESWKMHEDMIGAAEEFYQSLELPYRVVSIVSGALN 363
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQ---TKKMNEKIE--FVHM 417
AAAKK DLEAWFPG +RELVSCSNC YQSR L +R T K +K E VHM
Sbjct: 364 DAAAKKYDLEAWFPGYEDYRELVSCSNCTDYQSRALDIRLAHKASTAKGADKNEKGHVHM 423
Query: 418 LNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
LN T AT R +C ILE +QT GV++P R VP Y+ A +PFV+ A EE K
Sbjct: 424 LNGTLVATQRCLCCILENYQTPLGVKVP---RVLVP--YMGGAEFLPFVEGA--GEESVK 476
Query: 478 KQ 479
K+
Sbjct: 477 KE 478
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 530 EKD-ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
EKD + DD +LIATSEQP+C++H L E LPIRY G S+CFR+E +
Sbjct: 253 EKDADRDDLFLIATSEQPLCSLHMGETLEEKELPIRYAGYSSCFRKEAGS 302
>gi|123463833|ref|XP_001317013.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3]
gi|121899736|gb|EAY04790.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3]
Length = 501
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 145/211 (68%), Gaps = 9/211 (4%)
Query: 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIF 71
+P D DD +LIATSEQ +C H + L ++ LP +Y G S+CFR+E G+ G+D GIF
Sbjct: 243 SPTNDPKDDMFLIATSEQTLCGYHLNESLDDSQLPKKYCGFSSCFRKEAGASGKDNWGIF 302
Query: 72 RVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKK 131
RVHQFEKVEQF +TSPH+ ES KM ++M+ NS EF LG+ +R V +VSG LN++ A+K
Sbjct: 303 RVHQFEKVEQFCITSPHNGESQKMHEQMVHNSCEFIKSLGLPFRAVLVVSGELNYSTARK 362
Query: 132 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRV 182
+D+EAWFP +RELVS SNC D+QSR+L +RYG K K + AT CAT R
Sbjct: 363 VDIEAWFPSYNQYRELVSASNCKDFQSRKLDIRYGHGKNKDGEKEYVHMLNATLCATERT 422
Query: 183 ICAILETHQTETGVRIPDCLRKFVPAVYLNE 213
+C ILE +QT TG+RIP L+ ++ + +NE
Sbjct: 423 LCCILENYQTPTGIRIPKVLQPYMRELMINE 453
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 114/157 (72%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQF +TSPH+ ES K ++M+ NS EF LG+ +R V +VSG LN
Sbjct: 297 DNWGIFRVHQFEKVEQFCITSPHNGESQKMHEQMVHNSCEFIKSLGLPFRAVLVVSGELN 356
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++ A+K+D+EAWFP +RELVS SNC +QSR+L +RYG K + + E+VHMLNAT
Sbjct: 357 YSTARKVDIEAWFPSYNQYRELVSASNCKDFQSRKLDIRYGHGKNKDGEKEYVHMLNATL 416
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNE 459
CAT R +C ILE +QT TG+RIP L+ ++ + +NE
Sbjct: 417 CATERTLCCILENYQTPTGIRIPKVLQPYMRELMINE 453
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 528 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+P D DD +LIATSEQ +C H + L ++ LP +Y G S+CFR+E A
Sbjct: 243 SPTNDPKDDMFLIATSEQTLCGYHLNESLDDSQLPKKYCGFSSCFRKEAGA 293
>gi|401885309|gb|EJT49430.1| serine-tRNA ligase [Trichosporon asahii var. asahii CBS 2479]
gi|406695013|gb|EKC98328.1| serine-tRNA ligase [Trichosporon asahii var. asahii CBS 8904]
Length = 464
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 143/217 (65%), Gaps = 16/217 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E +D+YLIATSEQP+ +H D + SLPI+Y G STCFR+E GSHGRDT GIFRVHQF
Sbjct: 243 EENDRYLIATSEQPLSGMHSDENIEPKSLPIKYAGYSTCFRKEAGSHGRDTWGIFRVHQF 302
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF++ P +ES MLD M++ + EFY L I YRVVNIVSG LN+AA+ K DLEA
Sbjct: 303 EKVEQFIICDP--EESPAMLDSMVETAREFYESLEIPYRVVNIVSGGLNNAASIKYDLEA 360
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSR L VR G + + T CAT R +C ++
Sbjct: 361 WFPFQGEYKELVSCSNCTDYQSRSLNVRLGYKRAANEKAGFVHMLNGTLCATERALCCLV 420
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT G+RIP L+ ++ +PF + P
Sbjct: 421 ENYQTPDGIRIPKALQPYMQGREF-----LPFTQELP 452
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF++ P +ES LD M++ + EFY L I YRVVNIVSG LN
Sbjct: 292 DTWGIFRVHQFEKVEQFIICDP--EESPAMLDSMVETAREFYESLEIPYRVVNIVSGGLN 349
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+ K DLEAWFP G ++ELVSCSNC YQSR L VR G + NEK FVHMLN T
Sbjct: 350 NAASIKYDLEAWFPFQGEYKELVSCSNCTDYQSRSLNVRLGYKRAANEKAGFVHMLNGTL 409
Query: 423 CATTRVICAILETHQTETGVRIPDCL------RKFVP 453
CAT R +C ++E +QT G+RIP L R+F+P
Sbjct: 410 CATERALCCLVENYQTPDGIRIPKALQPYMQGREFLP 446
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 22/103 (21%)
Query: 477 KKQKKQKEG---MKKKVLIDEAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDE 533
KKQ K+ + M+K+++ A ++ E + AL +V G GD E
Sbjct: 203 KKQYKKIQAPFMMRKEIMAKTAQLE----------EFDEALYKVTG-----GDGVEE--- 244
Query: 534 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+YLIATSEQP+ +H D + SLPI+Y G STCFR+E
Sbjct: 245 -NDRYLIATSEQPLSGMHSDENIEPKSLPIKYAGYSTCFRKEA 286
>gi|296415556|ref|XP_002837452.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633324|emb|CAZ81643.1| unnamed protein product [Tuber melanosporum]
Length = 444
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/228 (50%), Positives = 147/228 (64%), Gaps = 25/228 (10%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
+E +DKYLIATSEQPI A+H D WL + LPIRY G S+C+R+E G+HG+D GIFRVHQ
Sbjct: 230 EEKNDKYLIATSEQPISALHADEWLQQKELPIRYAGFSSCYRREAGAHGKDAWGIFRVHQ 289
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQFV+T P ++SW+ DEMI SEEFY L I YRVV IVSGALN+AAAKK DLE
Sbjct: 290 FEKIEQFVITDP--EKSWEAFDEMINYSEEFYKSLNIPYRVVTIVSGALNNAAAKKYDLE 347
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G ++EL SR L +RYG Q + +T CAT R +C I
Sbjct: 348 AWFPFQGEYKEL----------SRNLEIRYGTKAQTDTVKKYVHCLNSTLCATERSLCCI 397
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
LE +QT G+ +P+ LRK++P + IPF K + ++ K
Sbjct: 398 LENYQTPEGINVPEALRKYIPGAPVF----IPFSKELATNSTSMRRGK 441
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 113/178 (63%), Gaps = 16/178 (8%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV+T P ++SW+ DEMI SEEFY L I YRVV IVSGALN
Sbjct: 280 DAWGIFRVHQFEKIEQFVITDP--EKSWEAFDEMINYSEEFYKSLNIPYRVVTIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++EL SR L +RYG + + ++VH LN+T
Sbjct: 338 NAAAKKYDLEAWFPFQGEYKEL----------SRNLEIRYGTKAQTDTVKKYVHCLNSTL 387
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
CAT R +C ILE +QT G+ +P+ LRK++P V IPF K + ++ K
Sbjct: 388 CATERSLCCILENYQTPEGINVPEALRKYIPGAPVF----IPFSKELATNSTSMRRGK 441
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+E +DKYLIATSEQPI A+H D WL + LPIRY G S+C+R+E A
Sbjct: 230 EEKNDKYLIATSEQPISALHADEWLQQKELPIRYAGFSSCYRREAGA 276
>gi|88770706|gb|ABD51956.1| serine tRNA ligase [Rhodomonas salina]
Length = 210
Score = 229 bits (584), Expect = 7e-57, Method: Composition-based stats.
Identities = 102/195 (52%), Positives = 141/195 (72%), Gaps = 8/195 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
+KYLIATSEQPI A H + + LP++Y G STCFR+E GSHG+D+ GIFRVHQFEK+
Sbjct: 8 EKYLIATSEQPISAFHTNEKITRNKLPLKYSGFSTCFRKESGSHGKDSAGIFRVHQFEKI 67
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF+LT ESW + +E++ N++EFY+ L I Y V+I SGA+N++A++K+DL WFP
Sbjct: 68 EQFILTDSKGTESWALFEELLGNTQEFYSSLKIPYICVDIPSGAINNSASRKIDLLGWFP 127
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICAILETHQ 191
SG+++ELVSCSNC D+QS+R+ + +K + +T CATTRVIC ILE +Q
Sbjct: 128 SSGSYKELVSCSNCTDFQSKRMNIELFPASEKFNGKFVHMLNSTLCATTRVICCILENNQ 187
Query: 192 TETGVRIPDCLRKFV 206
T G++IPD +R +V
Sbjct: 188 TNLGIKIPDVIRSYV 202
Score = 183 bits (464), Expect = 6e-43, Method: Composition-based stats.
Identities = 82/151 (54%), Positives = 114/151 (75%), Gaps = 3/151 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D+ GIFRVHQFEK+EQF+LT ESW +E++ N++EFY+ L I Y V+I SGA+N
Sbjct: 54 DSAGIFRVHQFEKIEQFILTDSKGTESWALFEELLGNTQEFYSSLKIPYICVDIPSGAIN 113
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVR-YGQTKKMNEKIEFVHMLNAT 421
++A++K+DL WFP SG+++ELVSCSNC +QS+R+ + + ++K N K FVHMLN+T
Sbjct: 114 NSASRKIDLLGWFPSSGSYKELVSCSNCTDFQSKRMNIELFPASEKFNGK--FVHMLNST 171
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFV 452
CATTRVIC ILE +QT G++IPD +R +V
Sbjct: 172 LCATTRVICCILENNQTNLGIKIPDVIRSYV 202
Score = 53.9 bits (128), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
+KYLIATSEQPI A H + + LP++Y G STCFR+E
Sbjct: 8 EKYLIATSEQPISAFHTNEKITRNKLPLKYSGFSTCFRKE 47
>gi|387592703|gb|EIJ87727.1| seryl-tRNA synthetase [Nematocida parisii ERTm3]
gi|387595332|gb|EIJ92957.1| seryl-tRNA synthetase [Nematocida parisii ERTm1]
Length = 440
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 146/211 (69%), Gaps = 16/211 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIATSEQP+ A+H W+ E LPIRY G STCFR+E G+HG+D RGIFRVHQFEK
Sbjct: 237 NDLYLIATSEQPLSALHEGEWIKETELPIRYGGYSTCFRKEAGAHGKDNRGIFRVHQFEK 296
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF++T+P + E+ +M+ S+ FY LG++YRVV+IVSGALN+AAA K DLEA F
Sbjct: 297 IEQFLITAPEESEAE--FKKMVDRSKAFYDSLGLSYRVVSIVSGALNNAAAIKYDLEALF 354
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQT-----KQKIY---ATACATTRVICAILETH 190
P S +RELVSCSNC DYQSR L VRY T KQ ++ T CA R +C ++E +
Sbjct: 355 PASDRYRELVSCSNCTDYQSRDLNVRYRPTESNEEKQFVHMLNGTLCAVQRTLCCLVENY 414
Query: 191 QTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
QTE G+ +P+ L +V + IPF++
Sbjct: 415 QTEGGIMVPEVLVPYVGETF------IPFIR 439
Score = 179 bits (455), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 116/165 (70%), Gaps = 9/165 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGIFRVHQFEK+EQF++T+P +ES +M+ S+ FY LG++YRVV+IVSGALN
Sbjct: 284 DNRGIFRVHQFEKIEQFLITAP--EESEAEFKKMVDRSKAFYDSLGLSYRVVSIVSGALN 341
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEA FP S +RELVSCSNC YQSR L VRY T+ NE+ +FVHMLN T
Sbjct: 342 NAAAIKYDLEALFPASDRYRELVSCSNCTDYQSRDLNVRYRPTES-NEEKQFVHMLNGTL 400
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
CA R +C ++E +QTE G+ +P+ L +V + IPF++
Sbjct: 401 CAVQRTLCCLVENYQTEGGIMVPEVLVPYVGETF------IPFIR 439
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY---- 584
+D YLIATSEQP+ A+H W+ E LPIRY G STCFR+E A G+ R +
Sbjct: 237 NDLYLIATSEQPLSALHEGEWIKETELPIRYGGYSTCFRKEAGAHGKDNRGIFRVHQFEK 296
Query: 585 ---FHVTCAQREGLLSEATSEE-VDQADPFYAHCRLHADKLEDFS----KFSKILVCCVC 636
F +T + SEA ++ VD++ FY L + S + I
Sbjct: 297 IEQFLITAPEE----SEAEFKKMVDRSKAFYDSLGLSYRVVSIVSGALNNAAAIKYDLEA 352
Query: 637 LGERSDDVNEIVECDSC 653
L SD E+V C +C
Sbjct: 353 LFPASDRYRELVSCSNC 369
>gi|388514105|gb|AFK45114.1| unknown [Medicago truncatula]
Length = 200
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 141/203 (69%), Gaps = 15/203 (7%)
Query: 41 PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMI 100
P LP+RY G S+CFR+E GSHGRDT GIFRV+QFEKVEQF +T+P+D++SW M +EM+
Sbjct: 3 PSTRLPLRYAGYSSCFRKEAGSHGRDTLGIFRVYQFEKVEQFCMTTPNDNDSWDMHEEML 62
Query: 101 QNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRR 160
+NSE+FY L I Y++V+IVSGALN AAAKK DLEAWFP S +RELVSCSNC DYQ+R+
Sbjct: 63 KNSEDFYKALNIPYQIVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDYQARK 122
Query: 161 LLVRYGQTKQK---------IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYL 211
L +RYGQ K + +T AT R IC ILE +Q E GV IP+ LR F+
Sbjct: 123 LEIRYGQKKSNEQLKQYVHLLNSTLTATERTICCILENNQKEDGVEIPEVLRPFMFGKTF 182
Query: 212 NEAGEIPFVKTAPIDEEETKKQK 234
+PF K P +E + KK K
Sbjct: 183 -----LPF-KNQPNNEAKGKKSK 199
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 131/179 (73%), Gaps = 8/179 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRV+QFEKVEQF +T+P+D++SW +EM++NSE+FY L I Y++V+IVSGALN
Sbjct: 28 DTLGIFRVYQFEKVEQFCMTTPNDNDSWDMHEEMLKNSEDFYKALNIPYQIVSIVSGALN 87
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI-EFVHMLNAT 421
AAAKK DLEAWFP S +RELVSCSNC YQ+R+L +RYGQ KK NE++ ++VH+LN+T
Sbjct: 88 DAAAKKYDLEAWFPASKTYRELVSCSNCTDYQARKLEIRYGQ-KKSNEQLKQYVHLLNST 146
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E GV IP+ LR F+ +PF K P +E + KK K
Sbjct: 147 LTATERTICCILENNQKEDGVEIPEVLRPFMFGKTF-----LPF-KNQPNNEAKGKKSK 199
>gi|123417088|ref|XP_001305028.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3]
gi|121886520|gb|EAX92098.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3]
Length = 501
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 145/211 (68%), Gaps = 9/211 (4%)
Query: 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIF 71
+P D DD +LIATSEQ +C H + L ++ LP +Y G S+CFR+E G+ G+D GIF
Sbjct: 243 SPTNDPKDDMFLIATSEQTLCGYHLNESLDDSQLPKKYCGFSSCFRKEAGASGKDNWGIF 302
Query: 72 RVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKK 131
RVHQFEKVEQF +TSPH+ ES KM ++M+ NS EF LG+ +R V +VSG LN++ A+K
Sbjct: 303 RVHQFEKVEQFCITSPHNGESQKMHEQMVHNSCEFIKSLGLPFRAVLVVSGELNYSTARK 362
Query: 132 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRV 182
+D+EAWFP +RELVS SNC D+QSR+L +RYG K K + AT CAT R
Sbjct: 363 VDIEAWFPSYNQYRELVSASNCKDFQSRKLDIRYGHGKNKDGEKEYVHMLNATLCATERT 422
Query: 183 ICAILETHQTETGVRIPDCLRKFVPAVYLNE 213
+C ILE +QT TG+RIP L+ ++ + L+E
Sbjct: 423 LCCILENYQTPTGIRIPKVLQPYMRELMLSE 453
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 114/157 (72%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEKVEQF +TSPH+ ES K ++M+ NS EF LG+ +R V +VSG LN
Sbjct: 297 DNWGIFRVHQFEKVEQFCITSPHNGESQKMHEQMVHNSCEFIKSLGLPFRAVLVVSGELN 356
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++ A+K+D+EAWFP +RELVS SNC +QSR+L +RYG K + + E+VHMLNAT
Sbjct: 357 YSTARKVDIEAWFPSYNQYRELVSASNCKDFQSRKLDIRYGHGKNKDGEKEYVHMLNATL 416
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNE 459
CAT R +C ILE +QT TG+RIP L+ ++ + ++E
Sbjct: 417 CATERTLCCILENYQTPTGIRIPKVLQPYMRELMLSE 453
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 528 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+P D DD +LIATSEQ +C H + L ++ LP +Y G S+CFR+E A
Sbjct: 243 SPTNDPKDDMFLIATSEQTLCGYHLNESLDDSQLPKKYCGFSSCFRKEAGA 293
>gi|378754808|gb|EHY64837.1| seryl-tRNA synthetase [Nematocida sp. 1 ERTm2]
Length = 439
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 148/214 (69%), Gaps = 16/214 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D +D YLIATSEQP+ A H WL E+ LPI+Y G STCFR+E G+HG+D RGIFRVHQ
Sbjct: 233 DGTNDLYLIATSEQPLSAQHEGEWLKESELPIKYCGYSTCFRKEAGAHGKDNRGIFRVHQ 292
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQF++TSP +ES ++M+ S+ FY LG++YRVV+IVSGALN+AAA K DLE
Sbjct: 293 FEKIEQFLITSP--EESENEFNKMVDRSKAFYDSLGLSYRVVSIVSGALNNAAAIKYDLE 350
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIY---ATACATTRVICAIL 187
A FP S +RELVSCSNC DYQSR L VRY + KQ ++ T CA R +C ++
Sbjct: 351 ALFPASQRYRELVSCSNCTDYQSRDLNVRYRPNESTEEKQFVHMLNGTLCAIQRTLCCLV 410
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVK 221
E +QTE G+ +P+ L +V + IPFV+
Sbjct: 411 ENYQTEGGLIVPEVLVPYVGESF------IPFVR 438
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/165 (56%), Positives = 118/165 (71%), Gaps = 9/165 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGIFRVHQFEK+EQF++TSP +ES ++M+ S+ FY LG++YRVV+IVSGALN
Sbjct: 283 DNRGIFRVHQFEKIEQFLITSP--EESENEFNKMVDRSKAFYDSLGLSYRVVSIVSGALN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEA FP S +RELVSCSNC YQSR L VRY + EK +FVHMLN T
Sbjct: 341 NAAAIKYDLEALFPASQRYRELVSCSNCTDYQSRDLNVRYRPNESTEEK-QFVHMLNGTL 399
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
CA R +C ++E +QTE G+ +P+ L VP YV E+ IPFV+
Sbjct: 400 CAIQRTLCCLVENYQTEGGLIVPEVL---VP--YVGESF-IPFVR 438
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D +D YLIATSEQP+ A H WL E+ LPI+Y G STCFR+E A
Sbjct: 233 DGTNDLYLIATSEQPLSAQHEGEWLKESELPIKYCGYSTCFRKEAGA 279
>gi|146163080|ref|XP_001010732.2| seryl-tRNA synthetase family protein [Tetrahymena thermophila]
gi|146146175|gb|EAR90487.2| seryl-tRNA synthetase family protein [Tetrahymena thermophila
SB210]
Length = 469
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 139/211 (65%), Gaps = 17/211 (8%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
+E +KYLIATSEQPI A H W+ LP+RY G+STCFR+E G+ GR+T G++RVHQ
Sbjct: 248 NEDKEKYLIATSEQPISAFHSGEWIDSKELPLRYAGLSTCFRKEAGAAGRETWGVYRVHQ 307
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEKVEQFVL P D SW L+ MI+ SEEF +LG+ YRVVNIVSGALN AAAKK DLE
Sbjct: 308 FEKVEQFVLCKPED--SWDELERMIKISEEFMQELGLPYRVVNIVSGALNDAAAKKYDLE 365
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT---------------KQKIYATACATT 180
AWFPG G ++ELVSCSNC D+QSR L V G+ + T CA
Sbjct: 366 AWFPGYGQYKELVSCSNCTDFQSRGLNVTTGEVIPGKKDGDKGNEKKFVHMLNGTLCAAQ 425
Query: 181 RVICAILETHQTETGVRIPDCLRKFVPAVYL 211
R + ILE +Q + GVR+P CL FV +L
Sbjct: 426 RTLTCILENYQEKDGVRVPKCLVPFVGTDFL 456
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/165 (57%), Positives = 113/165 (68%), Gaps = 10/165 (6%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A +T G++RVHQFEKVEQFVL P D SW L+ MI+ SEEF +LG+ YRVVNIVSG
Sbjct: 295 AGRETWGVYRVHQFEKVEQFVLCKPED--SWDELERMIKISEEFMQELGLPYRVVNIVSG 352
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQT-------KKMNEKI 412
ALN AAAKK DLEAWFPG G ++ELVSCSNC +QSR L V G+ K NEK
Sbjct: 353 ALNDAAAKKYDLEAWFPGYGQYKELVSCSNCTDFQSRGLNVTTGEVIPGKKDGDKGNEK- 411
Query: 413 EFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
+FVHMLN T CA R + ILE +Q + GVR+P CL FV ++
Sbjct: 412 KFVHMLNGTLCAAQRTLTCILENYQEKDGVRVPKCLVPFVGTDFL 456
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTY 584
+E +KYLIATSEQPI A H W+ LP+RY G+STCFR+E A T+
Sbjct: 248 NEDKEKYLIATSEQPISAFHSGEWIDSKELPLRYAGLSTCFRKEAGAAGRETW 300
>gi|302682558|ref|XP_003030960.1| hypothetical protein SCHCODRAFT_77152 [Schizophyllum commune H4-8]
gi|300104652|gb|EFI96057.1| hypothetical protein SCHCODRAFT_77152 [Schizophyllum commune H4-8]
Length = 453
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 143/217 (65%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
D+KYLIATSEQPI +H D W PE LP Y G STCFR+E G+ GRD GIFRVHQF
Sbjct: 235 DEKYLIATSEQPISVLHSDEWFESPETQLPRMYAGYSTCFRKEAGAAGRDMWGIFRVHQF 294
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P +SW+M D MI NSEEFY LG+ YRVV IVSGALN AAA+K DLEA
Sbjct: 295 EKVEQFCITDPA--KSWEMFDTMIGNSEEFYQSLGLRYRVVAIVSGALNLAAAQKYDLEA 352
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ----KIY-----ATACATTRVICAIL 187
+FP ++ELVSCSNC DYQ+RRL VR G KQ K+Y T CAT R +C ++
Sbjct: 353 YFPFQKEYKELVSCSNCTDYQARRLEVRCGLKKQDQTRKVYVHMLNGTLCATERALCCLV 412
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E QT G+ IP LR Y+ +PFV+ P
Sbjct: 413 ENWQTPEGLVIPPPLRP-----YMQGREFLPFVRELP 444
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 112/171 (65%), Gaps = 7/171 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEKVEQF +T P +SW+ D MI NSEEFY LG+ YRVV IVSG
Sbjct: 281 AGRDMWGIFRVHQFEKVEQFCITDPA--KSWEMFDTMIGNSEEFYQSLGLRYRVVAIVSG 338
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAA+K DLEA+FP ++ELVSCSNC YQ+RRL VR G K+ + +VHMLN
Sbjct: 339 ALNLAAAQKYDLEAYFPFQKEYKELVSCSNCTDYQARRLEVRCGLKKQDQTRKVYVHMLN 398
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
T CAT R +C ++E QT G+ IP LR Y+ +PFV+ P
Sbjct: 399 GTLCATERALCCLVENWQTPEGLVIPPPLRP-----YMQGREFLPFVRELP 444
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAG 579
D+KYLIATSEQPI +H D W PE LP Y G STCFR+E A
Sbjct: 235 DEKYLIATSEQPISVLHSDEWFESPETQLPRMYAGYSTCFRKEAGAA 281
>gi|57899338|dbj|BAD87949.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|57900428|dbj|BAD87664.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|215697599|dbj|BAG91593.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 400
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 132/169 (78%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+CA H + A LPIRY G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 287
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +TSP+D+ESW+M +EMI+NSE+FY ++G+ Y++V+IVSGALN AAAKK DLEAWF
Sbjct: 288 IEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWF 347
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACATTRVICAIL 187
P S +RELVSCSNC D+Q+RRL + YGQ K + A + + +L
Sbjct: 348 PASKTYRELVSCSNCTDFQARRLGIGYGQKKVSFHLDAGRSNYLKSHLL 396
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/104 (67%), Positives = 88/104 (84%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+D+ESW+ +EMI+NSE+FY ++G+ Y++V+IVSGALN
Sbjct: 275 DTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTK 406
AAAKK DLEAWFP S +RELVSCSNC +Q+RRL + YGQ K
Sbjct: 335 DAAAKKYDLEAWFPASKTYRELVSCSNCTDFQARRLGIGYGQKK 378
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSEQP+CA H + A LPIRY G STCFR+E +
Sbjct: 228 EEKYLIATSEQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGS 271
>gi|302771363|ref|XP_002969100.1| hypothetical protein SELMODRAFT_231245 [Selaginella moellendorffii]
gi|300163605|gb|EFJ30216.1| hypothetical protein SELMODRAFT_231245 [Selaginella moellendorffii]
Length = 419
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 145/204 (71%), Gaps = 12/204 (5%)
Query: 21 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVE 80
KYLIATSEQ +C +D+ + SLP+RY G S+CFR+E GSHG+DT GIFRVH+F+KVE
Sbjct: 225 KYLIATSEQALCGYLKDNNVAPESLPLRYAGYSSCFRKEAGSHGKDTLGIFRVHEFQKVE 284
Query: 81 QFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPG 140
QF +TSP + SW ML+EMI+ SE+FY LG+ Y+VVN+VSG LN AAAKK DLEAWFP
Sbjct: 285 QFCVTSP--ETSWDMLEEMIKTSEDFYQQLGLPYQVVNVVSGELNDAAAKKYDLEAWFPA 342
Query: 141 SGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC---ATTRVICAILETHQTETGVR 197
+G + ELVSCSNC DYQ+R L ++ G K+ ++ C AT R +C I+E +QT GVR
Sbjct: 343 AGKYEELVSCSNCTDYQARSLNIKSG--KKLVHLLNCTLVATQRTMCCIVENYQTRNGVR 400
Query: 198 IPDCLRKFVPAVYLNEAGEIPFVK 221
+P+ L+ F+ +PF K
Sbjct: 401 VPEVLQPFMDGTTF-----LPFPK 419
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 108/150 (72%), Gaps = 10/150 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVH+F+KVEQF +TSP + SW L+EMI+ SE+FY LG+ Y+VVN+VSG LN
Sbjct: 270 DTLGIFRVHEFQKVEQFCVTSP--ETSWDMLEEMIKTSEDFYQQLGLPYQVVNVVSGELN 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP +G + ELVSCSNC YQ+R L ++ G+ + VH+LN T
Sbjct: 328 DAAAKKYDLEAWFPAAGKYEELVSCSNCTDYQARSLNIKSGK--------KLVHLLNCTL 379
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452
AT R +C I+E +QT GVR+P+ L+ F+
Sbjct: 380 VATQRTMCCIVENYQTRNGVRVPEVLQPFM 409
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 537 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
KYLIATSEQ +C +D+ + SLP+RY G S+CFR+E
Sbjct: 225 KYLIATSEQALCGYLKDNNVAPESLPLRYAGYSSCFRKEA 264
>gi|58265976|ref|XP_570144.1| serine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134110422|ref|XP_776038.1| hypothetical protein CNBD0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258706|gb|EAL21391.1| hypothetical protein CNBD0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226377|gb|AAW42837.1| serine-tRNA ligase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 461
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 147/223 (65%), Gaps = 11/223 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIATSEQPI A H D L +LP+ Y G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 241 EDMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEAGSHGRDTWGIFRVHQFEK 300
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV+ P + S LD M+ NS EFY LGI YR+VNIVSG LN+AAA K DLEAWF
Sbjct: 301 VEQFVVCEP--EASPAELDAMVANSREFYESLGIPYRLVNIVSGGLNNAAAIKYDLEAWF 358
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-QTKQK-------IYATACATTRVICAILETH 190
P G ++ELVSCSNC DYQSR L VR G + K K + T CAT R +C ++E +
Sbjct: 359 PYQGEYKELVSCSNCTDYQSRSLNVRLGFKEKDKKTGFVHMLNGTLCATERALCCLVENY 418
Query: 191 QTETGVRIPDCLRKFVPAV-YLNEAGEIPFVKTAPIDEEETKK 232
QT G+RIP L+ ++ +L E+P T+ ++KK
Sbjct: 419 QTPEGLRIPKVLQPYMQGRDFLPYTAELPKTSTSKGPSTKSKK 461
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 119/177 (67%), Gaps = 4/177 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFV+ P + S LD M+ NS EFY LGI YR+VNIVSG LN
Sbjct: 288 DTWGIFRVHQFEKVEQFVVCEP--EASPAELDAMVANSREFYESLGIPYRLVNIVSGGLN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFP G ++ELVSCSNC YQSR L VR G K+ ++K FVHMLN T
Sbjct: 346 NAAAIKYDLEAWFPYQGEYKELVSCSNCTDYQSRSLNVRLG-FKEKDKKTGFVHMLNGTL 404
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIPFVKTAPIDEEETKK 478
CAT R +C ++E +QT G+RIP L+ ++ ++ E+P T+ ++KK
Sbjct: 405 CATERALCCLVENYQTPEGLRIPKVLQPYMQGRDFLPYTAELPKTSTSKGPSTKSKK 461
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D YLIATSEQPI A H D L +LP+ Y G STCFR+E
Sbjct: 241 EDMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEA 282
>gi|19115779|ref|NP_594867.1| cytoplasmic serine-tRNA ligase Srs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|3183173|sp|O14018.1|SYSC_SCHPO RecName: Full=Serine--tRNA ligase, cytoplasmic; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2440188|emb|CAB10149.1| cytoplasmic serine-tRNA ligase Srs1 (predicted)
[Schizosaccharomyces pombe]
Length = 450
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 144/217 (66%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
+++YLIATSEQPI A H W P LP++Y G STC+R+E GSHGRD GIFRVH F
Sbjct: 231 EERYLIATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAF 290
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ EMI ++E+FY L + YR+V IVSGALN+AAAKK DLEA
Sbjct: 291 EKIEQFVLTDP--EKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEA 348
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSR L +R G K +K Y +T CAT R +C IL
Sbjct: 349 WFPFQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCIL 408
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT GV +P L+ Y+ +PF K P
Sbjct: 409 ENYQTPDGVNVPKVLQP-----YMGGKTFLPFTKELP 440
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 113/168 (67%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ EMI ++E+FY L + YR+V IVSGALN
Sbjct: 280 DAWGIFRVHAFEKIEQFVLTDP--EKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 338 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
CAT R +C ILE +QT GV +P L+ Y+ +PF K P
Sbjct: 398 CATERALCCILENYQTPDGVNVPKVLQP-----YMGGKTFLPFTKELP 440
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 18/97 (18%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRTY-- 584
+++YLIATSEQPI A H W P LP++Y G STC+R+E + G+ R +
Sbjct: 231 EERYLIATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAF 290
Query: 585 -----FHVTCAQREGLLSEATSEEVDQADPFYAHCRL 616
F +T ++ EA +E ++ A+ FY L
Sbjct: 291 EKIEQFVLTDPEKSW---EAFTEMINHAEDFYKSLEL 324
>gi|195117984|ref|XP_002003520.1| GI17962 [Drosophila mojavensis]
gi|193914095|gb|EDW12962.1| GI17962 [Drosophila mojavensis]
Length = 979
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 123/176 (69%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLGERSDDVNEIVECDSCGV+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 130 MCCVCLGERSDDVNEIVECDSCGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 189
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
EP CELCPN +GGI+KETDV
Sbjct: 190 TEPDCELCPN----------------------------------------KGGIYKETDV 209
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + +ART + +
Sbjct: 210 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKLCSLCDNALFARTGVCI 265
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 78/126 (61%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K ++ PWVPTQK++R LTSSA+ CR LL KA M VD + Q +
Sbjct: 356 QRKLLKIQQKYAQHKQMKPTPWVPTQKMSRLLTSSASACRRLLAKAEFMAVDVQHLEQRE 415
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + L D+ KKWHI AF+VEF AY+++R R+ + ++Q+ L N +L Q L+
Sbjct: 416 AHIQALQDIRKKWHIAPAFSVEFTAYYMDRIVRMAEFKQQQQQLVQHNAALSQAQDVLRA 475
Query: 1012 TYDELV 1017
YD +
Sbjct: 476 KYDNAL 481
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
CG+C ++D H + KCDTC+L+YHL CL+PPL R PKK+KL GW
Sbjct: 589 CGICKRNNDQHLLVKCDTCNLHYHLGCLNPPLTRPPKKSKLYGW 632
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 267 CDAGMCKTYFHVTCAQVAGYLIEAHHED-DAADPFYAHCKVHSEK 310
Score = 43.5 bits (101), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
C +C + + + CD CH +YH ACL+PPL + PK
Sbjct: 921 CCICQQTAKANQVVTCDECHKHYHFACLEPPLKKSPK 957
>gi|302784382|ref|XP_002973963.1| hypothetical protein SELMODRAFT_414448 [Selaginella moellendorffii]
gi|300158295|gb|EFJ24918.1| hypothetical protein SELMODRAFT_414448 [Selaginella moellendorffii]
Length = 419
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 144/204 (70%), Gaps = 12/204 (5%)
Query: 21 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVE 80
KYLIATSEQ +C +D + SLP+RY G S+CFR+E GSHG+DT GIFRVH+F+KVE
Sbjct: 225 KYLIATSEQALCGYLKDKNVAPESLPLRYAGYSSCFRKEAGSHGKDTLGIFRVHEFQKVE 284
Query: 81 QFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPG 140
QF +T+P + SW ML+EMI+ SE+FY LG+ Y+VVN+VSG LN AAAKK DLEAWFP
Sbjct: 285 QFCVTAP--ETSWDMLEEMIKTSEDFYQQLGLPYQVVNVVSGELNDAAAKKYDLEAWFPA 342
Query: 141 SGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC---ATTRVICAILETHQTETGVR 197
+G + ELVSCSNC DYQ+R L ++ G K+ ++ C AT R +C I+E +QT GVR
Sbjct: 343 AGKYEELVSCSNCTDYQARSLNIKSG--KKLVHLLNCTLVATQRTMCCIVENYQTRNGVR 400
Query: 198 IPDCLRKFVPAVYLNEAGEIPFVK 221
+P+ L+ F+ +PF K
Sbjct: 401 VPEVLQPFMDGTTF-----LPFPK 419
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 108/150 (72%), Gaps = 10/150 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVH+F+KVEQF +T+P + SW L+EMI+ SE+FY LG+ Y+VVN+VSG LN
Sbjct: 270 DTLGIFRVHEFQKVEQFCVTAP--ETSWDMLEEMIKTSEDFYQQLGLPYQVVNVVSGELN 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP +G + ELVSCSNC YQ+R L ++ G+ + VH+LN T
Sbjct: 328 DAAAKKYDLEAWFPAAGKYEELVSCSNCTDYQARSLNIKSGK--------KLVHLLNCTL 379
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452
AT R +C I+E +QT GVR+P+ L+ F+
Sbjct: 380 VATQRTMCCIVENYQTRNGVRVPEVLQPFM 409
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 537 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
KYLIATSEQ +C +D + SLP+RY G S+CFR+E
Sbjct: 225 KYLIATSEQALCGYLKDKNVAPESLPLRYAGYSSCFRKEA 264
>gi|20129223|ref|NP_608836.1| CG15439 [Drosophila melanogaster]
gi|7295705|gb|AAF51010.1| CG15439 [Drosophila melanogaster]
gi|162951763|gb|ABY21743.1| LD43150p [Drosophila melanogaster]
Length = 1008
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 124/176 (70%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLGERSDDVNEIVECDSCGV+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 120 MCCVCLGERSDDVNEIVECDSCGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 179
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
+EP CELCPN +GGI+KETDV
Sbjct: 180 SEPDCELCPN----------------------------------------KGGIYKETDV 199
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + +ART + +
Sbjct: 200 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCENALFARTGVCI 255
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 77/123 (62%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K L+ PWVPTQK++R LT+SA+ CR LL KA +M VD + Q +
Sbjct: 346 QRKLLKIQHKYTRHKELKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQRE 405
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + L D+ KKWHI AF+VEF AY+++R R+ ++QR L N L +Q L+
Sbjct: 406 AHINALTDIRKKWHIAPAFSVEFTAYYMDRIVRMDDFRQQQRELISHNAILSKDQDVLRA 465
Query: 1012 TYD 1014
YD
Sbjct: 466 QYD 468
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 257 CDAGMCKTYFHVTCAQVAGFLIEAHHED-DAADPFYAHCKVHSEK 300
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
CG+C S D H + KCDTC+L+YHL CL+PPL R PKK+K GW
Sbjct: 587 CGICKRSKDQHLLVKCDTCNLHYHLGCLNPPLTRPPKKSKQYGW 630
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
C +C + + + CD CH +YH ACLDPPL + PK
Sbjct: 950 CCVCSQTGKSNQVVTCDECHRHYHFACLDPPLKKSPK 986
>gi|321262679|ref|XP_003196058.1| serine-tRNA ligase [Cryptococcus gattii WM276]
gi|317462533|gb|ADV24271.1| Serine-tRNA ligase, putative [Cryptococcus gattii WM276]
Length = 461
Score = 226 bits (576), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 143/214 (66%), Gaps = 11/214 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIATSEQPI A H D L +LP+ Y G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 241 EDMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEAGSHGRDTWGIFRVHQFEK 300
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV+ P + S LD M+ N+ EFY LGI YR+VNIVSG LN+AAA K DLEAWF
Sbjct: 301 VEQFVVCEP--EASPAELDSMVANAREFYESLGIPYRLVNIVSGGLNNAAAIKYDLEAWF 358
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-QTKQK-------IYATACATTRVICAILETH 190
P G ++ELVSCSNC DYQSR L VR G + K K + T CAT R +C ++E +
Sbjct: 359 PYQGEYKELVSCSNCTDYQSRSLNVRLGFKEKDKKTGFVHMLNGTLCATERALCCLVENY 418
Query: 191 QTETGVRIPDCLRKFVPAV-YLNEAGEIPFVKTA 223
QT G+RIP L+ ++ +L E+P T+
Sbjct: 419 QTPEGLRIPKVLQPYMQGRDFLPYTAELPKTSTS 452
Score = 179 bits (454), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 115/168 (68%), Gaps = 4/168 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFV+ P + S LD M+ N+ EFY LGI YR+VNIVSG LN
Sbjct: 288 DTWGIFRVHQFEKVEQFVVCEP--EASPAELDSMVANAREFYESLGIPYRLVNIVSGGLN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFP G ++ELVSCSNC YQSR L VR G K+ ++K FVHMLN T
Sbjct: 346 NAAAIKYDLEAWFPYQGEYKELVSCSNCTDYQSRSLNVRLG-FKEKDKKTGFVHMLNGTL 404
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV-YVNEAGEIPFVKTA 469
CAT R +C ++E +QT G+RIP L+ ++ ++ E+P T+
Sbjct: 405 CATERALCCLVENYQTPEGLRIPKVLQPYMQGRDFLPYTAELPKTSTS 452
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D YLIATSEQPI A H D L +LP+ Y G STCFR+E
Sbjct: 241 EDMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEA 282
>gi|195035703|ref|XP_001989311.1| GH11660 [Drosophila grimshawi]
gi|193905311|gb|EDW04178.1| GH11660 [Drosophila grimshawi]
Length = 1021
Score = 226 bits (576), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 124/176 (70%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLG+RSDD+NEIVECDSCGV+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 168 MCCVCLGDRSDDINEIVECDSCGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 227
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
+EP CELCPN RGGI+KETDV
Sbjct: 228 SEPDCELCPN----------------------------------------RGGIYKETDV 247
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + +ART + +
Sbjct: 248 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKLCSLCDNPLFARTGVCI 303
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 64/95 (67%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K L+ PWVPTQK++R LTSSA+ CR LL KA M VD + Q +
Sbjct: 392 QRKLQKIQHKYAQHKQLKPTPWVPTQKMSRLLTSSASACRRLLDKAEFMAVDVQHLEQRE 451
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLG 986
+ + +L D+ KKWHI AF+VEF AY+++R R+
Sbjct: 452 AHIQSLQDIRKKWHIAPAFSVEFTAYYMDRIVRMA 486
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 305 CDAGMCKTYFHVTCAQVAGYLIEAHHED-DAADPFYAHCKVHSEK 348
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
CG+C ++D H + KCDTC+L+YHL CL+PPL R PKK+K GW
Sbjct: 625 CGICKRNNDQHLLVKCDTCNLHYHLGCLNPPLSRPPKKSKQYGW 668
Score = 43.9 bits (102), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
C +C + + + CD CH +YH ACLDPPL + PK
Sbjct: 963 CCVCSETGKANQVVTCDECHKHYHFACLDPPLKKSPK 999
>gi|405119937|gb|AFR94708.1| serine-tRNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 461
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 143/214 (66%), Gaps = 11/214 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIATSEQPI A H D L +LP+ Y G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 241 EDMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEAGSHGRDTWGIFRVHQFEK 300
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF++ P + S LD M+ NS EFY LGI YR+VNIVSG LN+AAA K DLEAWF
Sbjct: 301 VEQFIVCEP--EASPAELDAMVANSREFYESLGIPYRLVNIVSGGLNNAAAIKYDLEAWF 358
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-QTKQK-------IYATACATTRVICAILETH 190
P G ++ELVSCSNC DYQSR L VR G + K K + T CAT R +C ++E +
Sbjct: 359 PYQGEYKELVSCSNCTDYQSRSLNVRLGFKEKDKKTGFVHMLNGTLCATERALCCLVENY 418
Query: 191 QTETGVRIPDCLRKFVPAV-YLNEAGEIPFVKTA 223
QT G+RIP L+ ++ +L E+P T+
Sbjct: 419 QTPEGLRIPKVLQPYMQGRDFLPYTAELPKSSTS 452
Score = 179 bits (454), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 108/150 (72%), Gaps = 3/150 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF++ P + S LD M+ NS EFY LGI YR+VNIVSG LN
Sbjct: 288 DTWGIFRVHQFEKVEQFIVCEP--EASPAELDAMVANSREFYESLGIPYRLVNIVSGGLN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFP G ++ELVSCSNC YQSR L VR G K+ ++K FVHMLN T
Sbjct: 346 NAAAIKYDLEAWFPYQGEYKELVSCSNCTDYQSRSLNVRLG-FKEKDKKTGFVHMLNGTL 404
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452
CAT R +C ++E +QT G+RIP L+ ++
Sbjct: 405 CATERALCCLVENYQTPEGLRIPKVLQPYM 434
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D YLIATSEQPI A H D L +LP+ Y G STCFR+E
Sbjct: 241 EDMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEA 282
>gi|195342465|ref|XP_002037821.1| GM18091 [Drosophila sechellia]
gi|194132671|gb|EDW54239.1| GM18091 [Drosophila sechellia]
Length = 1007
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 124/176 (70%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLGERSDDVNEIVECDSCGV+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 119 MCCVCLGERSDDVNEIVECDSCGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 178
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
+EP CELCPN +GGI+KETDV
Sbjct: 179 SEPDCELCPN----------------------------------------KGGIYKETDV 198
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + +ART + +
Sbjct: 199 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCDNALFARTGVCI 254
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 77/123 (62%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K L+ PWVPTQK++R LT+SA+ CR LL KA +M VD + Q +
Sbjct: 345 QRKLLKIQHKYARHKELKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQRE 404
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + L D+ KKWHI AF+VEF AY+++R R+ ++QR L N L +Q L+
Sbjct: 405 AHINALTDIRKKWHIAPAFSVEFTAYYMDRIVRMDDFRQQQRELISHNAILSKDQDVLRA 464
Query: 1012 TYD 1014
YD
Sbjct: 465 QYD 467
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 256 CDAGMCKTYFHVTCAQVAGFLIEAHHED-DAADPFYAHCKVHSEK 299
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
CG+C S D H + KCDTC+L+YHL CL+PPL R PKK+K GW
Sbjct: 586 CGICKRSKDQHLLVKCDTCNLHYHLGCLNPPLTRPPKKSKQYGW 629
Score = 44.3 bits (103), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
C +C + + + CD CH +YH ACLDPPL + PK
Sbjct: 949 CCVCSQTGKSNQVVTCDECHRHYHFACLDPPLKKSPK 985
>gi|194766223|ref|XP_001965224.1| GF24044 [Drosophila ananassae]
gi|190617834|gb|EDV33358.1| GF24044 [Drosophila ananassae]
Length = 991
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 124/176 (70%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLGERSDDVNEIVECD+CGV+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 127 MCCVCLGERSDDVNEIVECDACGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 186
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
+EP CELCPN +GGI+KETDV
Sbjct: 187 SEPDCELCPN----------------------------------------KGGIYKETDV 206
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + +ART + +
Sbjct: 207 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCDNSLFARTGVCI 262
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 76/123 (61%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K + PWVPTQK++R LT+SA+ CR LL KA +M VD + Q +
Sbjct: 353 QRKLLKIQQKYAHHKEHKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQRE 412
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + L D+ KKWHI AF+VEF AY+++R R+ ++QR L N L +Q L+
Sbjct: 413 AHINALTDIRKKWHIAPAFSVEFAAYYMDRIDRMEDFRKQQRQLIAHNAILSKDQDVLRA 472
Query: 1012 TYD 1014
YD
Sbjct: 473 QYD 475
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 264 CDAGMCKTYFHVTCAQVAGFLIEAHHED-DAADPFYAHCKVHSEK 307
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 1037 SHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
S CG+C S+D H + KCDTC L+YHL CL+PPL R PKK+K GW
Sbjct: 583 STACGICKRSNDQHLLVKCDTCKLHYHLGCLNPPLTRPPKKSKQYGW 629
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
C +C + + + CD CH +YH ACLDPPL + PK
Sbjct: 933 CCVCSETGKSNQVVTCDECHRHYHFACLDPPLKKSPK 969
>gi|209876085|ref|XP_002139485.1| seryl-tRNA synthetase family protein [Cryptosporidium muris RN66]
gi|209555091|gb|EEA05136.1| seryl-tRNA synthetase family protein [Cryptosporidium muris RN66]
Length = 462
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 142/193 (73%), Gaps = 10/193 (5%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
+LIATSEQP+ A+H ++ + + LPI+Y G+STCFR+E G+HG+DT G+FRVHQFEKVEQ
Sbjct: 247 FLIATSEQPLAALHINTSIEQKDLPIKYAGISTCFRKEAGAHGKDTWGLFRVHQFEKVEQ 306
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F +T+P +ES +M +EMI SEEFY LG+ YRVV+IVSGALN AAAKK DLEAWFPG
Sbjct: 307 FCVTTP--EESNEMHEEMINISEEFYQSLGLPYRVVSIVSGALNDAAAKKYDLEAWFPGY 364
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTK---QKIY-----ATACATTRVICAILETHQTE 193
+RELVSCSNC DYQSR L R G K +K+Y T CA R +C I E +QT
Sbjct: 365 NNYRELVSCSNCTDYQSRALECRMGFKKGDREKLYCHFLNGTLCAVQRTLCCIAENYQTT 424
Query: 194 TGVRIPDCLRKFV 206
TG++IP L+ ++
Sbjct: 425 TGLKIPAVLQPYL 437
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 109/155 (70%), Gaps = 3/155 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT G+FRVHQFEKVEQF +T+P +ES + +EMI SEEFY LG+ YRVV+IVSGALN
Sbjct: 291 DTWGLFRVHQFEKVEQFCVTTP--EESNEMHEEMINISEEFYQSLGLPYRVVSIVSGALN 348
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPG +RELVSCSNC YQSR L R G K EK+ + H LN T
Sbjct: 349 DAAAKKYDLEAWFPGYNNYRELVSCSNCTDYQSRALECRMGFKKGDREKL-YCHFLNGTL 407
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
CA R +C I E +QT TG++IP L+ ++ ++
Sbjct: 408 CAVQRTLCCIAENYQTTTGLKIPAVLQPYLGMDFI 442
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+LIATSEQP+ A+H ++ + + LPI+Y G+STCFR+E A
Sbjct: 247 FLIATSEQPLAALHINTSIEQKDLPIKYAGISTCFRKEAGA 287
>gi|195388166|ref|XP_002052754.1| GJ17735 [Drosophila virilis]
gi|194149211|gb|EDW64909.1| GJ17735 [Drosophila virilis]
Length = 983
Score = 226 bits (575), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 124/176 (70%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLGERSDDVNEIVECD+CGV+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 126 MCCVCLGERSDDVNEIVECDACGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 185
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
+EP CELCPN +GGI+KETDV
Sbjct: 186 SEPDCELCPN----------------------------------------KGGIYKETDV 205
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + +ART + +
Sbjct: 206 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKLCSLCDNALFARTGVCI 261
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 78/123 (63%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K L+ PWVPTQK++R LTSSA+ CR LL KA M VD + Q +
Sbjct: 350 QRKLLKIQHKYAQHKQLKPTPWVPTQKMSRLLTSSASACRRLLAKAEFMAVDVQHLEQRE 409
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+++ L D+ KKWHI AF+VEF AY+++R R+ + ++Q+ L N +L Q L+
Sbjct: 410 ANIQALQDIRKKWHIAPAFSVEFTAYYMDRIVRMSEFKQQQQQLLQHNSALSQAQDVLRA 469
Query: 1012 TYD 1014
YD
Sbjct: 470 KYD 472
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 1029 SKQAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
SK A V + CG+C ++D H + KCDTC+L+YHL CL+PPL R PKK+K GW
Sbjct: 578 SKAATIVPAVSCGICKRNNDQHLLVKCDTCNLHYHLGCLNPPLTRPPKKSKQYGW 632
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 263 CDAGMCKTYFHVTCAQVAGYLIEAHHED-DAADPFYAHCKVHSEK 306
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
C +C + P+ + CD CH +YH ACL+PPL + PK
Sbjct: 925 CCVCTQTGKPNQVVTCDECHKHYHFACLEPPLKKSPK 961
>gi|195471270|ref|XP_002087928.1| GE14723 [Drosophila yakuba]
gi|194174029|gb|EDW87640.1| GE14723 [Drosophila yakuba]
Length = 1009
Score = 226 bits (575), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 123/176 (69%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLGERSDDVNEIVECDSCGV+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 119 MCCVCLGERSDDVNEIVECDSCGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 178
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
+EP CELCPN +GGI+KETDV
Sbjct: 179 SEPDCELCPN----------------------------------------KGGIYKETDV 198
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + YAR + +
Sbjct: 199 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCENALYARVGVCI 254
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 77/123 (62%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K L+ PWVPTQK++R LT+SA+ CR LL KA +M VD + Q +
Sbjct: 345 QRKLLKIQHKYARHKELKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQRE 404
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + L D+ KKWHI AF+VEF AY+++R R+ ++QR L N L +Q L+
Sbjct: 405 AHINALTDIRKKWHIAPAFSVEFTAYYMDRIVRMDDFRQQQRELIAHNAILSKDQDVLRA 464
Query: 1012 TYD 1014
YD
Sbjct: 465 QYD 467
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 565 YLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
Y V C CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 247 YARVGVCI--GCDAGMCKTYFHVTCAQVAGFLIEAHHED-DAADPFYAHCKVHSEK 299
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
CG+C S D H + KCDTC+L+YHL CL+PPL R PKK+K GW
Sbjct: 586 CGICKRSKDQHLLVKCDTCNLHYHLGCLNPPLTRPPKKSKQYGW 629
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
C +C + + + CD CH +YH ACLDPPL + PK
Sbjct: 951 CCVCTQTGKTNQVVTCDECHRHYHFACLDPPLKKSPK 987
>gi|340508894|gb|EGR34499.1| seryl-tRNA synthetase, putative [Ichthyophthirius multifiliis]
Length = 356
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 145/210 (69%), Gaps = 7/210 (3%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
++++ +D YLIATSEQP+C +H W+ + +LP +Y G+S+CFR+E G+ GR T GIFRV
Sbjct: 143 QQEDQEDMYLIATSEQPLCGLHSQEWIDQKNLPFKYAGISSCFRKEAGAAGRQTWGIFRV 202
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQFEKVEQF++ P +SW+ D MIQ SEEF +L I YRVV+IVSGALN AAAKK D
Sbjct: 203 HQFEKVEQFIICEPQ--KSWEEFDNMIQISEEFLQNLKIPYRVVSIVSGALNGAAAKKCD 260
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-----ATACATTRVICAILE 188
LE WFPG ++EL+S SNC DYQSR+L ++ G+ K K Y T CA R + ILE
Sbjct: 261 LECWFPGYREYKELMSISNCTDYQSRQLNIQTGEPKNKQYVHLLNGTLCAAQRTLTCILE 320
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIP 218
+Q + G+R+PD L+ +V ++ E P
Sbjct: 321 NYQEKEGIRVPDVLQPYVGIDFIKFKHEQP 350
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 110/165 (66%), Gaps = 6/165 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A T GIFRVHQFEKVEQF++ P +SW+ D MIQ SEEF +L I YRVV+IVSG
Sbjct: 192 AGRQTWGIFRVHQFEKVEQFIICEPQ--KSWEEFDNMIQISEEFLQNLKIPYRVVSIVSG 249
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAAKK DLE WFPG ++EL+S SNC YQSR+L ++ G+ K ++VH+LN
Sbjct: 250 ALNGAAAKKCDLECWFPGYREYKELMSISNCTDYQSRQLNIQTGEPKNK----QYVHLLN 305
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIP 464
T CA R + ILE +Q + G+R+PD L+ +V ++ E P
Sbjct: 306 GTLCAAQRTLTCILENYQEKEGIRVPDVLQPYVGIDFIKFKHEQP 350
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTY 584
++++ +D YLIATSEQP+C +H W+ + +LP +Y G+S+CFR+E A +T+
Sbjct: 143 QQEDQEDMYLIATSEQPLCGLHSQEWIDQKNLPFKYAGISSCFRKEAGAAGRQTW 197
>gi|198475235|ref|XP_001356978.2| GA13729 [Drosophila pseudoobscura pseudoobscura]
gi|198138731|gb|EAL34044.2| GA13729 [Drosophila pseudoobscura pseudoobscura]
Length = 1007
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 124/176 (70%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLGERSDDVNEIVECD+CGV+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 124 MCCVCLGERSDDVNEIVECDACGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 183
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
+EP CELCPN +GGI+KETDV
Sbjct: 184 SEPDCELCPN----------------------------------------KGGIYKETDV 203
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + +ART + +
Sbjct: 204 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCENSLFARTGVCI 259
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 78/123 (63%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K ++KY K L+ PWVPTQK++R LT+SA+ CR LL KA +M VD + Q +
Sbjct: 350 QRKLSKIQLKYAQHKELKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHMEQRE 409
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + L D+ KKWHI AF+VEF AY+++R R+ ++Q+ L N L +Q L+
Sbjct: 410 AHINALTDIRKKWHITPAFSVEFTAYYMDRIVRMEDFRQQQQKLISHNAILSKDQDNLRA 469
Query: 1012 TYD 1014
YD
Sbjct: 470 QYD 472
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 261 CDAGMCKTYFHVTCAQVAGFLIEAHHED-DAADPFYAHCKVHSEK 304
Score = 70.1 bits (170), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 1005 EQSRLQKTYDELVYMEVVFPQPPLSKQAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHL 1064
+ SR+ T + M + P + A ++ CG+C ++D H + KCDTC+L+YHL
Sbjct: 562 DSSRMLSTQAKQGRMAITTPCDTGTPTAIAAMA--CGICKRNNDQHLLVKCDTCNLHYHL 619
Query: 1065 ACLDPPLLRMPKKTKLMGW 1083
CL+PPL R PKK+K GW
Sbjct: 620 GCLNPPLTRPPKKSKQYGW 638
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 1035 VLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
++ C +C S + + CD CH +YH ACLDPPL + PK
Sbjct: 944 IVEINCCVCTKSGKANQVVTCDECHKHYHFACLDPPLKKSPK 985
>gi|428672115|gb|EKX73030.1| seryl-tRNA synthetase, putative [Babesia equi]
Length = 455
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 147/215 (68%), Gaps = 9/215 (4%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
+G EK + D D +LIATSEQP+ A+HR+ LPI+Y GVS+CFR+E G
Sbjct: 236 VGGQEKHDAHTHQTDSKDRLFLIATSEQPLAALHRNEVYQAKQLPIKYAGVSSCFRKEAG 295
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
+HG+D +GIFR+HQF+KVEQF++T+ + S + +EM+++SEEFY LGI YRVV+IV+
Sbjct: 296 AHGKDLKGIFRIHQFQKVEQFIVTTA--ENSVAIHEEMMRHSEEFYQSLGIPYRVVSIVA 353
Query: 122 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIY-----A 174
GALN AAAKK DLEAWFPG G +RELVSCSNC DYQ+R L RY G T K +
Sbjct: 354 GALNKAAAKKYDLEAWFPGYGDYRELVSCSNCTDYQARALNARYFTGDTANKTFLHMLNG 413
Query: 175 TACATTRVICAILETHQTETGVRIPDCLRKFVPAV 209
T A+ R +C +LE +QT+ GV +P L F+ V
Sbjct: 414 TLVASQRCLCCVLENYQTDHGVVVPKVLVPFMDGV 448
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 108/153 (70%), Gaps = 4/153 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFR+HQF+KVEQF++T+ + S +EM+++SEEFY LGI YRVV+IV+GALN
Sbjct: 300 DLKGIFRIHQFQKVEQFIVTTA--ENSVAIHEEMMRHSEEFYQSLGIPYRVVSIVAGALN 357
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFPG G +RELVSCSNC YQ+R L RY N+ F+HMLN T
Sbjct: 358 KAAAKKYDLEAWFPGYGDYRELVSCSNCTDYQARALNARYFTGDTANKT--FLHMLNGTL 415
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
A+ R +C +LE +QT+ GV +P L F+ V
Sbjct: 416 VASQRCLCCVLENYQTDHGVVVPKVLVPFMDGV 448
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%)
Query: 518 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECD 577
+G EK + D D +LIATSEQP+ A+HR+ LPI+Y GVS+CFR+E
Sbjct: 236 VGGQEKHDAHTHQTDSKDRLFLIATSEQPLAALHRNEVYQAKQLPIKYAGVSSCFRKEAG 295
Query: 578 A 578
A
Sbjct: 296 A 296
>gi|340507317|gb|EGR33298.1| seryl-tRNA synthetase, putative [Ichthyophthirius multifiliis]
Length = 460
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 149/235 (63%), Gaps = 19/235 (8%)
Query: 3 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGS 62
GK E+ + E+ E D YLIATSEQPI A H ++ LPIRY G+S+CFR+E G+
Sbjct: 234 GKPEESKEGKTEQTE--DFYLIATSEQPISAYHGGEYIDNKELPIRYAGLSSCFRKEAGA 291
Query: 63 HGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSG 122
G++T GI+RVHQFEK+EQFVL P D SW+ L+ MI+ SEEF LG+ YR+VNIVSG
Sbjct: 292 AGKETWGIYRVHQFEKIEQFVLCKPED--SWQELENMIKISEEFMQALGLPYRIVNIVSG 349
Query: 123 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IY 173
ALN AAAKK DLEAWFPG ++ELVSCSNC D+QSR L V G K K +
Sbjct: 350 ALNDAAAKKYDLEAWFPGYSQYKELVSCSNCTDFQSRGLNVTTGDVKDKKAEKVFVHMLN 409
Query: 174 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEE 228
T CA R + ILE +Q + GVR+P L+ FV + IP+ + P E
Sbjct: 410 GTLCAAQRTLTCILENYQEKDGVRVPQVLQPFVGVDF------IPYRQGMPKKNE 458
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 113/175 (64%), Gaps = 8/175 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A +T GI+RVHQFEK+EQFVL P D SW+ L+ MI+ SEEF LG+ YR+VNIVSG
Sbjct: 292 AGKETWGIYRVHQFEKIEQFVLCKPED--SWQELENMIKISEEFMQALGLPYRIVNIVSG 349
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN AAAKK DLEAWFPG ++ELVSCSNC +QSR L V G K + FVHMLN
Sbjct: 350 ALNDAAAKKYDLEAWFPGYSQYKELVSCSNCTDFQSRGLNVTTGDVKDKKAEKVFVHMLN 409
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEE 474
T CA R + ILE +Q + GVR+P L+ FV + IP+ + P E
Sbjct: 410 GTLCAAQRTLTCILENYQEKDGVRVPQVLQPFVGVDF------IPYRQGMPKKNE 458
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 GKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
GK E+ + E+ E D YLIATSEQPI A H ++ LPIRY G+S+CFR+E A
Sbjct: 234 GKPEESKEGKTEQTE--DFYLIATSEQPISAYHGGEYIDNKELPIRYAGLSSCFRKEAGA 291
Query: 579 GMCRTY 584
T+
Sbjct: 292 AGKETW 297
>gi|194856099|ref|XP_001968676.1| GG24375 [Drosophila erecta]
gi|190660543|gb|EDV57735.1| GG24375 [Drosophila erecta]
Length = 1006
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 124/176 (70%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLGERSDDVNEIVECDSCGV+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 118 MCCVCLGERSDDVNEIVECDSCGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 177
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
+EP CELCPN +GGI+KETDV
Sbjct: 178 SEPDCELCPN----------------------------------------KGGIYKETDV 197
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + +AR+ + +
Sbjct: 198 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCENALFARSGVCI 253
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 77/123 (62%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K L+ PWVPTQK++R LT+SA+ CR LL KA +M VD + Q +
Sbjct: 344 QRKLLKIQNKYARHKELKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQRE 403
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + L D+ KKWHI AF+VEF AY+++R R+ ++QR L N L +Q L+
Sbjct: 404 AHINALTDIRKKWHIAPAFSVEFTAYYMDRIVRMDDFRQQQRELISHNAILSKDQDVLRA 463
Query: 1012 TYD 1014
YD
Sbjct: 464 QYD 466
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 255 CDAGMCKTYFHVTCAQVAGFLIEAHHED-DAADPFYAHCKVHSEK 298
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
CG+C S D H + KCDTC+L+YHL CL+PPL R PKK+K GW
Sbjct: 585 CGICKRSKDQHLLVKCDTCNLHYHLGCLNPPLTRPPKKSKQYGW 628
Score = 42.4 bits (98), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076
C +C + + + CD CH +YH ACL+PPL + PK
Sbjct: 948 CCVCTQTGKSNQVVTCDECHRHYHFACLEPPLKKSPK 984
>gi|67604545|ref|XP_666622.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657650|gb|EAL36390.1| hypothetical protein Chro.80542 [Cryptosporidium hominis]
Length = 454
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 145/216 (67%), Gaps = 18/216 (8%)
Query: 15 KDELDDK--YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFR 72
K E+D +LIATSEQPI A+H + L + LPI+Y G+STCFR+E G+HG+DT GIFR
Sbjct: 237 KGEVDSNSLFLIATSEQPIAAMHHNVTLEDKDLPIKYAGISTCFRKEAGAHGKDTWGIFR 296
Query: 73 VHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKL 132
+HQFEKVEQF +T P D S K+ +EMI SEEFY L + YRV++IVSGALN AA+KK
Sbjct: 297 IHQFEKVEQFCVTLPED--SQKIHEEMISISEEFYQSLELPYRVISIVSGALNDAASKKY 354
Query: 133 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVI 183
DLEAWFPG ++RELVSCSNC DYQSR L R G K+ + T CA R +
Sbjct: 355 DLEAWFPGYNSYRELVSCSNCTDYQSRALECRLGFRKEGEREKHYCHFLNGTLCAIQRTM 414
Query: 184 CAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPF 219
C I+E +QT G+RIP L+ Y+N IPF
Sbjct: 415 CCIVENYQTPDGLRIPKVLQP-----YMNGVEFIPF 445
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 108/163 (66%), Gaps = 7/163 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFR+HQFEKVEQF +T P D S K +EMI SEEFY L + YRV++IVSGALN
Sbjct: 290 DTWGIFRIHQFEKVEQFCVTLPED--SQKIHEEMISISEEFYQSLELPYRVISIVSGALN 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+KK DLEAWFPG ++RELVSCSNC YQSR L R G K+ + + H LN T
Sbjct: 348 DAASKKYDLEAWFPGYNSYRELVSCSNCTDYQSRALECRLGFRKEGEREKHYCHFLNGTL 407
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 465
CA R +C I+E +QT G+RIP L+ Y+N IPF
Sbjct: 408 CAIQRTMCCIVENYQTPDGLRIPKVLQP-----YMNGVEFIPF 445
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 11/75 (14%)
Query: 515 REVIGKGEKVGD---------SAPEKDELDDK--YLIATSEQPICAVHRDSWLPEASLPI 563
R+++GK ++ D S K E+D +LIATSEQPI A+H + L + LPI
Sbjct: 212 RDLMGKAAELQDFEETLYHIPSDNSKGEVDSNSLFLIATSEQPIAAMHHNVTLEDKDLPI 271
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFR+E A
Sbjct: 272 KYAGISTCFRKEAGA 286
>gi|66361666|ref|XP_627356.1| seryl-tRNA synthetase, cytoplasmic [Cryptosporidium parvum Iowa II]
gi|46228735|gb|EAK89605.1| seryl-tRNA synthetase, cytoplasmic [Cryptosporidium parvum Iowa II]
gi|323509279|dbj|BAJ77532.1| cgd8_4720 [Cryptosporidium parvum]
Length = 454
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 145/216 (67%), Gaps = 18/216 (8%)
Query: 15 KDELDDK--YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFR 72
K E+D +LIATSEQPI A+H + L + LPI+Y G+STCFR+E G+HG+DT GIFR
Sbjct: 237 KGEVDSNSLFLIATSEQPIAAMHHNVTLEDKDLPIKYAGISTCFRKEAGAHGKDTWGIFR 296
Query: 73 VHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKL 132
+HQFEKVEQF +T P D S K+ +EMI SEEFY L + YRV++IVSGALN AA+KK
Sbjct: 297 IHQFEKVEQFCVTLPED--SQKIHEEMISISEEFYQSLELPYRVISIVSGALNDAASKKY 354
Query: 133 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVI 183
DLEAWFPG ++RELVSCSNC DYQSR L R G K+ + T CA R +
Sbjct: 355 DLEAWFPGYNSYRELVSCSNCTDYQSRALECRLGFRKEGEREKHYCHFLNGTLCAIQRTM 414
Query: 184 CAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPF 219
C I+E +QT G+RIP L+ Y+N IPF
Sbjct: 415 CCIVENYQTPDGLRIPKVLQP-----YMNGVEFIPF 445
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 108/163 (66%), Gaps = 7/163 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFR+HQFEKVEQF +T P D S K +EMI SEEFY L + YRV++IVSGALN
Sbjct: 290 DTWGIFRIHQFEKVEQFCVTLPED--SQKIHEEMISISEEFYQSLELPYRVISIVSGALN 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+KK DLEAWFPG ++RELVSCSNC YQSR L R G K+ + + H LN T
Sbjct: 348 DAASKKYDLEAWFPGYNSYRELVSCSNCTDYQSRALECRLGFRKEGEREKHYCHFLNGTL 407
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 465
CA R +C I+E +QT G+RIP L+ Y+N IPF
Sbjct: 408 CAIQRTMCCIVENYQTPDGLRIPKVLQP-----YMNGVEFIPF 445
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 11/75 (14%)
Query: 515 REVIGKGEKVGD---------SAPEKDELDDK--YLIATSEQPICAVHRDSWLPEASLPI 563
R+++GK ++ D S K E+D +LIATSEQPI A+H + L + LPI
Sbjct: 212 RDLMGKAAELQDFEETLYHIPSDNSKGEVDSNSLFLIATSEQPIAAMHHNVTLEDKDLPI 271
Query: 564 RYLGVSTCFRQECDA 578
+Y G+STCFR+E A
Sbjct: 272 KYAGISTCFRKEAGA 286
>gi|242040317|ref|XP_002467553.1| hypothetical protein SORBIDRAFT_01g030086 [Sorghum bicolor]
gi|241921407|gb|EER94551.1| hypothetical protein SORBIDRAFT_01g030086 [Sorghum bicolor]
Length = 219
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 100/149 (67%), Positives = 124/149 (83%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQP+CA H + LPIRY G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 70 EEKYLIATSEQPMCAYHLGDRIHPDELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEK 129
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +T+P+ ++SW+ML+EMI+NSE+FY ++G+ Y+VV+IVSGALN AA+KK DLEAWF
Sbjct: 130 IEQFCITNPNGNDSWEMLEEMIKNSEDFYKEIGLPYQVVSIVSGALNDAASKKYDLEAWF 189
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQ 167
P S +RELVSCSNC DYQ+RRL + YGQ
Sbjct: 190 PASNTYRELVSCSNCTDYQARRLGITYGQ 218
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 87/102 (85%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T+P+ ++SW+ L+EMI+NSE+FY ++G+ Y+VV+IVSGALN
Sbjct: 117 DTAGIFRVHQFEKIEQFCITNPNGNDSWEMLEEMIKNSEDFYKEIGLPYQVVSIVSGALN 176
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQ 404
AA+KK DLEAWFP S +RELVSCSNC YQ+RRL + YGQ
Sbjct: 177 DAASKKYDLEAWFPASNTYRELVSCSNCTDYQARRLGITYGQ 218
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSEQP+CA H + LPIRY G STCFR+E +
Sbjct: 70 EEKYLIATSEQPMCAYHLGDRIHPDELPIRYAGYSTCFRKEAGS 113
>gi|195576531|ref|XP_002078129.1| GD22709 [Drosophila simulans]
gi|194190138|gb|EDX03714.1| GD22709 [Drosophila simulans]
Length = 1183
Score = 222 bits (566), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 123/176 (69%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CCVCLGERSDDVNEIVECDSC V+VHEGCYGV D SISST S+CSTEPWFCE+CRAG+
Sbjct: 119 MCCVCLGERSDDVNEIVECDSCSVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRAGV 178
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
+EP CELCPN +GGI+KETDV
Sbjct: 179 SEPDCELCPN----------------------------------------KGGIYKETDV 198
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHL+CALY+PGVAFGEV++LS+VTLFEM YS+WGAK C+LC + +ART + +
Sbjct: 199 GKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCDNALFARTGVCI 254
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 77/124 (62%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
QRKL K + KY K L+ PWVPTQK++R LT+SA+ CR LL KA +M VD + Q +
Sbjct: 345 QRKLLKIQHKYARHKELKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQRE 404
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + L D+ KKWHI AF+VEF AY+++R R+ ++QR L N L +Q L+
Sbjct: 405 AHINALTDIRKKWHIAPAFSVEFTAYYMDRIVRMDDFRQQQRELISHNAILSKDQDVLRA 464
Query: 1012 TYDE 1015
YD
Sbjct: 465 QYDS 468
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ G L EA E+ D ADPFYAHC++H++K
Sbjct: 256 CDAGMCKTYFHVTCAQVAGFLIEAHHED-DAADPFYAHCKMHSEK 299
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
CG+C S D H + KCDTC+L+YHL CL+PPL R PKK+K GW
Sbjct: 586 CGICKRSKDQHLLVKCDTCNLHYHLGCLNPPLTRPPKKSKQYGW 629
>gi|333986647|ref|YP_004519254.1| seryl-tRNA synthetase [Methanobacterium sp. SWAN-1]
gi|333824791|gb|AEG17453.1| Seryl-tRNA synthetase [Methanobacterium sp. SWAN-1]
Length = 429
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 140/197 (71%), Gaps = 11/197 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D ++IAT+EQ + A+HR + E +LP +Y G+STCFR+E GSHG+DTRGIFRVH
Sbjct: 220 KVEGEDLFMIATAEQTLAALHRGEIIDERTLPRKYCGISTCFRREAGSHGKDTRGIFRVH 279
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV + D E K+ +E+++N+E Y LGI YRVV+IVS ALN A+KK DL
Sbjct: 280 QFEKIEQFVFCNKEDTE--KIHEELLKNAETIYQKLGIPYRVVSIVSSALNDNASKKYDL 337
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG--------QTKQKIYATACATTRVICAI 186
E WFPGS +RELVSC+NCLDYQ+R+L RYG + + +TA AT R IC I
Sbjct: 338 EGWFPGSDTYRELVSCTNCLDYQARKLNARYGIQGDSDSLKICHTLNSTAIATERTICCI 397
Query: 187 LETHQTETG-VRIPDCL 202
LE +Q E G V++PD L
Sbjct: 398 LENYQQEDGRVKVPDVL 414
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 106/147 (72%), Gaps = 4/147 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV + D E K +E+++N+E Y LGI YRVV+IVS ALN
Sbjct: 271 DTRGIFRVHQFEKIEQFVFCNKEDTE--KIHEELLKNAETIYQKLGIPYRVVSIVSSALN 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A+KK DLE WFPGS +RELVSC+NCL YQ+R+L RYG + ++ ++ H LN+TA
Sbjct: 329 DNASKKYDLEGWFPGSDTYRELVSCTNCLDYQARKLNARYG-IQGDSDSLKICHTLNSTA 387
Query: 423 CATTRVICAILETHQTETG-VRIPDCL 448
AT R IC ILE +Q E G V++PD L
Sbjct: 388 IATERTICCILENYQQEDGRVKVPDVL 414
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D ++IAT+EQ + A+HR + E +LP +Y G+STCFR+E
Sbjct: 220 KVEGEDLFMIATAEQTLAALHRGEIIDERTLPRKYCGISTCFRREA 265
>gi|218188461|gb|EEC70888.1| hypothetical protein OsI_02425 [Oryza sativa Indica Group]
gi|222618678|gb|EEE54810.1| hypothetical protein OsJ_02228 [Oryza sativa Japonica Group]
Length = 846
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 9/172 (5%)
Query: 47 IRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEF 106
+RY G STCFR+E GSHGRDT GIFRVHQFEK+EQF +TSP+D+ESW+M +EMI+NSE+F
Sbjct: 245 MRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSEDF 304
Query: 107 YADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG 166
Y ++G+ Y++V+IVSGALN AAAKK DLEAWFP S +RELVSCSNC D+Q+RRL + YG
Sbjct: 305 YKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCSNCTDFQARRLGIGYG 364
Query: 167 QTKQK---------IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 209
Q K + +T AT R +C ILE Q E GV +P L+ ++ +
Sbjct: 365 QKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKENGVEVPKALQPYMGGI 416
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 117/153 (76%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +TSP+D+ESW+ +EMI+NSE+FY ++G+ Y++V+IVSGALN
Sbjct: 264 DTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALN 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S +RELVSCSNC +Q+RRL + YGQ K + +FVHMLN+T
Sbjct: 324 DAAAKKYDLEAWFPASKTYRELVSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTL 383
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
AT R +C ILE Q E GV +P L+ ++ +
Sbjct: 384 TATERTLCCILENFQKENGVEVPKALQPYMGGI 416
>gi|322706038|gb|EFY97620.1| putative serine-tRNA ligase, cytosolic [Metarhizium anisopliae
ARSEF 23]
Length = 471
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/254 (48%), Positives = 153/254 (60%), Gaps = 47/254 (18%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DKYLIATSEQPI A H D WL LPI+ +E GSHGRD GI+RVHQFEK
Sbjct: 234 NDKYLIATSEQPISAFHADEWLIPKDLPIK---------REAGSHGRDAWGIYRVHQFEK 284
Query: 79 V---------------------EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVV 117
V EQF+LT P ++SW +MI SEEFY L + Y++V
Sbjct: 285 VKAYLPAPCINRGSFTANRAKIEQFLLTDP--EKSWDAFHDMIGISEEFYKSLELPYQIV 342
Query: 118 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------ 171
+IVSGALN+AA+KKLDLEAWFP G ++ELVSCSNC DYQSR L +R+G Q
Sbjct: 343 SIVSGALNNAASKKLDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRFGSKMQTDVKKKY 402
Query: 172 ---IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDE 227
+ +T CATTR +C ILE +QTE G+R+P+ LRK++P A E IPF K P +
Sbjct: 403 VHCLNSTLCATTRTMCCILENYQTEEGLRVPEPLRKYLPG-----APEFIPFAKELPKES 457
Query: 228 EETKKQKKQKEGMK 241
K ++ +G K
Sbjct: 458 TSQKSLPQRPKGGK 471
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 148/238 (62%), Gaps = 32/238 (13%)
Query: 251 QVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLDTRGIFRV 310
+ GSHGRD GI+RVHQFEKV+ + L +P RG F
Sbjct: 265 EAGSHGRDAWGIYRVHQFEKVKAY-LPAP----------------------CINRGSFTA 301
Query: 311 HQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 370
++ K+EQF+LT P ++SW +MI SEEFY L + Y++V+IVSGALN+AA+KKLD
Sbjct: 302 NR-AKIEQFLLTDP--EKSWDAFHDMIGISEEFYKSLELPYQIVSIVSGALNNAASKKLD 358
Query: 371 LEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 430
LEAWFP G ++ELVSCSNC YQSR L +R+G + + K ++VH LN+T CATTR +C
Sbjct: 359 LEAWFPFQGEYKELVSCSNCTDYQSRALEIRFGSKMQTDVKKKYVHCLNSTLCATTRTMC 418
Query: 431 AILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQKEGMK 487
ILE +QTE G+R+P+ LRK++P A E IPF K P + K ++ +G K
Sbjct: 419 CILENYQTEEGLRVPEPLRKYLPG-----APEFIPFAKELPKESTSQKSLPQRPKGGK 471
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIR 564
+DKYLIATSEQPI A H D WL LPI+
Sbjct: 234 NDKYLIATSEQPISAFHADEWLIPKDLPIK 263
>gi|160331655|ref|XP_001712534.1| sys1 [Hemiselmis andersenii]
gi|159765983|gb|ABW98209.1| sys1 [Hemiselmis andersenii]
Length = 428
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 138/201 (68%), Gaps = 8/201 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DK+LIATSEQPI H D + P++Y+G S+CFR+E GSHG+DT G+FRVHQFEK
Sbjct: 226 EDKFLIATSEQPISVFHLDETIENGKFPLKYVGFSSCFRKESGSHGKDTSGLFRVHQFEK 285
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF+L S ESW +EM++N + FY+ + I ++ +NI S +LN+ A+KK+DL +F
Sbjct: 286 VEQFILCSSDYLESWVFFNEMLENVKFFYSSINIPFKFLNIASNSLNNTASKKIDLLGFF 345
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICAILETH 190
P S FRELVSCSNC YQS+++ ++ +++ + +T CATTRVIC ILE
Sbjct: 346 PKSNTFRELVSCSNCTSYQSKKINIKVKPSQKNPGNNYPHMLNSTLCATTRVICCILENF 405
Query: 191 QTETGVRIPDCLRKFVPAVYL 211
QTE+G+ IP LR +V ++
Sbjct: 406 QTESGIIIPSILRNYVGISFV 426
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT G+FRVHQFEKVEQF+L S ESW +EM++N + FY+ + I ++ +NI S +LN
Sbjct: 273 DTSGLFRVHQFEKVEQFILCSSDYLESWVFFNEMLENVKFFYSSINIPFKFLNIASNSLN 332
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+ A+KK+DL +FP S FRELVSCSNC +YQS+++ ++ ++K N + HMLN+T
Sbjct: 333 NTASKKIDLLGFFPKSNTFRELVSCSNCTSYQSKKINIKVKPSQK-NPGNNYPHMLNSTL 391
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
CATTRVIC ILE QTE+G+ IP LR +V +V
Sbjct: 392 CATTRVICCILENFQTESGIIIPSILRNYVGISFV 426
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+DK+LIATSEQPI H D + P++Y+G S+CFR+E +
Sbjct: 226 EDKFLIATSEQPISVFHLDETIENGKFPLKYVGFSSCFRKESGS 269
>gi|399949631|gb|AFP65289.1| seryl-tRNA synthetase (serin-tRNA ligase) [Chroomonas
mesostigmatica CCMP1168]
Length = 434
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 148/215 (68%), Gaps = 14/215 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E ++K+LIATSEQPI H + L + LPI+Y+G STCFR+E GSHG+DT GIFRVHQF
Sbjct: 223 EEENKFLIATSEQPITCFHLNETLSKNRLPIKYVGFSTCFRKESGSHGKDTSGIFRVHQF 282
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQFV+ +P + SW ++E+++N ++FY+ + I Y+++NI + ALN++A+KK+DL
Sbjct: 283 EKVEQFVICTPENSLSWSYMEELLENVKDFYSSINIPYKIINISTEALNNSASKKIDLLG 342
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICAILE 188
+FP S F+ELVSCSNC +QS RL ++ ++ + +T CAT+RVIC I E
Sbjct: 343 FFPKSDTFKELVSCSNCTGFQSERLKIKTNLKRKNEEITFPHMLNSTLCATSRVICCIAE 402
Query: 189 THQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTA 223
+QT +G+ +P+ LR + + +PF K++
Sbjct: 403 NYQTISGIIVPNVLRNYTGLSF------VPFKKSS 431
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 119/167 (71%), Gaps = 7/167 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQFV+ +P + SW ++E+++N ++FY+ + I Y+++NI + ALN
Sbjct: 272 DTSGIFRVHQFEKVEQFVICTPENSLSWSYMEELLENVKDFYSSINIPYKIINISTEALN 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++A+KK+DL +FP S F+ELVSCSNC +QS RL ++ K+ NE+I F HMLN+T
Sbjct: 332 NSASKKIDLLGFFPKSDTFKELVSCSNCTGFQSERLKIK-TNLKRKNEEITFPHMLNSTL 390
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTA 469
CAT+RVIC I E +QT +G+ +P+ LR + +V PF K++
Sbjct: 391 CATSRVICCIAENYQTISGIIVPNVLRNYTGLSFV------PFKKSS 431
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC------DAGMCRTY-- 584
E ++K+LIATSEQPI H + L + LPI+Y+G STCFR+E +G+ R +
Sbjct: 223 EEENKFLIATSEQPITCFHLNETLSKNRLPIKYVGFSTCFRKESGSHGKDTSGIFRVHQF 282
Query: 585 ----FHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADKL----EDFSKFSKILVCCVC 636
V C L E ++ FY+ + + E + + + +
Sbjct: 283 EKVEQFVICTPENSLSWSYMEELLENVKDFYSSINIPYKIINISTEALNNSASKKIDLLG 342
Query: 637 LGERSDDVNEIVECDSC-GVTVHEVKIQ 663
+SD E+V C +C G +KI+
Sbjct: 343 FFPKSDTFKELVSCSNCTGFQSERLKIK 370
>gi|195093186|ref|XP_001997702.1| GH24998 [Drosophila grimshawi]
gi|193905713|gb|EDW04580.1| GH24998 [Drosophila grimshawi]
Length = 160
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/139 (72%), Positives = 120/139 (86%), Gaps = 3/139 (2%)
Query: 336 MIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQS 395
MI N+E+F LGI YR+VNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCL YQ+
Sbjct: 1 MIDNAEQFCQSLGIPYRIVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQA 60
Query: 396 RRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
RRLLVRYGQTKKMN +++VHMLNAT CA TRVICAILETHQTETG+++P+ L++++PA
Sbjct: 61 RRLLVRYGQTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKRYMPAK 120
Query: 456 YVNEAGEIPFVKTAPIDEE 474
+ + EIPFVK APID E
Sbjct: 121 FQD---EIPFVKPAPIDLE 136
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 112/139 (80%), Gaps = 12/139 (8%)
Query: 99 MIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQS 158
MI N+E+F LGI YR+VNIVSGALNHAA+KKLDLEAWF GSGA+RELVSCSNCLDYQ+
Sbjct: 1 MIDNAEQFCQSLGIPYRIVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQA 60
Query: 159 RRLLVRYGQTKQ---------KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 209
RRLLVRYGQTK+ + AT CA TRVICAILETHQTETG+++P+ L++++PA
Sbjct: 61 RRLLVRYGQTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPEPLKRYMPAK 120
Query: 210 YLNEAGEIPFVKTAPIDEE 228
+ + EIPFVK APID E
Sbjct: 121 FQD---EIPFVKPAPIDLE 136
>gi|207346845|gb|EDZ73214.1| YDR023Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 437
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 135/201 (67%), Gaps = 16/201 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E GSHG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKF 205
ILE +QTE G C R F
Sbjct: 414 CILENYQTEDGF---GCTRSF 431
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKF 451
AT R +C ILE +QTE G C R F
Sbjct: 406 AATQRALCCILENYQTEDGF---GCTRSF 431
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
>gi|361129811|gb|EHL01693.1| putative Seryl-tRNA synthetase, cytoplasmic [Glarea lozoyensis
74030]
Length = 251
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 136/218 (62%), Gaps = 29/218 (13%)
Query: 7 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRD 66
KV D P+ +DKYLIATSEQPI A H D WL LPIRY G S+C+R+E GS G+D
Sbjct: 21 KVIDGEPQ----NDKYLIATSEQPISAFHADEWLVAKDLPIRYAGFSSCYRREAGSAGKD 76
Query: 67 TRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 126
GIFRVHQFEK+EQFVLT P ++SW+ DEMI SEEFY LG+ YRVV IVSGALN+
Sbjct: 77 AWGIFRVHQFEKIEQFVLTDP--EKSWEAFDEMINYSEEFYKSLGVPYRVVAIVSGALNN 134
Query: 127 AAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACATTRVICAI 186
AAAKK DLEAWFP G ++E + + +T CAT R +C +
Sbjct: 135 AAAKKYDLEAWFPFQGEYKE-------------------KKYVHALNSTLCATERALCCL 175
Query: 187 LETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
LE QTE G ++P+ LRK++P IPF K P
Sbjct: 176 LENFQTEDGFKVPEPLRKYLPGA----VDFIPFTKELP 209
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 102/171 (59%), Gaps = 34/171 (19%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D GIFRVHQFEK+EQFVLT P ++SW+ DEMI SEEFY LG+ YRVV IVSG
Sbjct: 73 AGKDAWGIFRVHQFEKIEQFVLTDP--EKSWEAFDEMINYSEEFYKSLGVPYRVVAIVSG 130
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
ALN+AAAKK DLEAWFP G ++E KK +VH LN
Sbjct: 131 ALNNAAAKKYDLEAWFPFQGEYKE----------------------KK------YVHALN 162
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
+T CAT R +C +LE QTE G ++P+ LRK++P IPF K P
Sbjct: 163 STLCATERALCCLLENFQTEDGFKVPEPLRKYLPGA----VDFIPFTKELP 209
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 523 KVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
KV D P+ +DKYLIATSEQPI A H D WL LPIRY G S+C+R+E +
Sbjct: 21 KVIDGEPQ----NDKYLIATSEQPISAFHADEWLVAKDLPIRYAGFSSCYRREAGSA 73
>gi|399218819|emb|CCF75706.1| unnamed protein product [Babesia microti strain RI]
Length = 448
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 145/216 (67%), Gaps = 13/216 (6%)
Query: 10 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRG 69
D E DE ++ YLIATSEQP+ A+HR+ L LP++Y G+S CFR+E G+HG DTRG
Sbjct: 235 DGNVENDERENLYLIATSEQPLTALHRNETLNGKKLPLKYAGISPCFRKEAGAHGIDTRG 294
Query: 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
IFRVH F+KVEQF +TS + E +M EMI+ SEEFY L + YR+V+IV+ ALN+AA+
Sbjct: 295 IFRVHNFDKVEQFCITSCENSE--EMHQEMIKVSEEFYQSLMLPYRIVSIVASALNNAAS 352
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ---TKQKIY---ATACATTRVI 183
KK DLE WFPG +RELVSCSNC DYQS + +Y TK+ ++ T AT R I
Sbjct: 353 KKYDLEVWFPGYNNYRELVSCSNCTDYQSVSVKTKYTTSQGTKKYVHMLNGTLVATQRCI 412
Query: 184 CAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPF 219
CAI+E Q E GVRIP L VP Y+ + IP+
Sbjct: 413 CAIVENFQDENGVRIPPVL---VP--YMGGSEYIPW 443
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
+DTRGIFRVH F+KVEQF +TS + E EMI+ SEEFY L + YR+V+IV+ AL
Sbjct: 290 IDTRGIFRVHNFDKVEQFCITSCENSEEMH--QEMIKVSEEFYQSLMLPYRIVSIVASAL 347
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
N+AA+KK DLE WFPG +RELVSCSNC YQS + +Y ++ ++VHMLN T
Sbjct: 348 NNAASKKYDLEVWFPGYNNYRELVSCSNCTDYQSVSVKTKYTTSQGTK---KYVHMLNGT 404
Query: 422 ACATTRVICAILETHQTETGVRIPDCLRKFV 452
AT R ICAI+E Q E GVRIP L ++
Sbjct: 405 LVATQRCICAIVENFQDENGVRIPPVLVPYM 435
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 526 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D E DE ++ YLIATSEQP+ A+HR+ L LP++Y G+S CFR+E A
Sbjct: 235 DGNVENDERENLYLIATSEQPLTALHRNETLNGKKLPLKYAGISPCFRKEAGA 287
>gi|288930586|ref|YP_003434646.1| seryl-tRNA synthetase [Ferroglobus placidus DSM 10642]
gi|288892834|gb|ADC64371.1| seryl-tRNA synthetase [Ferroglobus placidus DSM 10642]
Length = 450
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 139/204 (68%), Gaps = 11/204 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE P+ A+H + L E LP+ Y GVS CFR+E G+HG+DT+GIFRVH
Sbjct: 235 KLEGEDLYLIATSEHPLAAMHMNETLGEDELPLLYAGVSPCFRKEAGAHGKDTKGIFRVH 294
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ESW+ +++I+N+E+ + LGI YR+VNI +G L AAKK DL
Sbjct: 295 QFNKVEQFVFCLP--EESWEWHEKLIENAEKLWQGLGIPYRIVNICTGDLGVVAAKKYDL 352
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--------QKIYATACATTRVICAI 186
EAW P G +RE+VSCSNC D+QS RL +RY + + + +TA ATTR I AI
Sbjct: 353 EAWMPAQGKYREMVSCSNCTDWQSYRLNIRYAEKRGMPSKGFVHTLNSTAIATTRAITAI 412
Query: 187 LETHQTETG-VRIPDCLRKFVPAV 209
+E +Q E G V IP LRK++ +
Sbjct: 413 IENYQLEDGRVEIPKVLRKYLEPI 436
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 4/154 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF KVEQFV P +ESW+ +++I+N+E+ + LGI YR+VNI +G L
Sbjct: 286 DTKGIFRVHQFNKVEQFVFCLP--EESWEWHEKLIENAEKLWQGLGIPYRIVNICTGDLG 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLEAW P G +RE+VSCSNC +QS RL +RY + + M K FVH LN+TA
Sbjct: 344 VVAAKKYDLEAWMPAQGKYREMVSCSNCTDWQSYRLNIRYAEKRGMPSK-GFVHTLNSTA 402
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AI+E +Q E G V IP LRK++ +
Sbjct: 403 IATTRAITAIIENYQLEDGRVEIPKVLRKYLEPI 436
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLIATSE P+ A+H + L E LP+ Y GVS CFR+E A
Sbjct: 235 KLEGEDLYLIATSEHPLAAMHMNETLGEDELPLLYAGVSPCFRKEAGA 282
>gi|83317733|ref|XP_731290.1| seryl-tRNA synthetase [Plasmodium yoelii yoelii 17XNL]
gi|23491277|gb|EAA22855.1| seryl-tRNA synthetase [Plasmodium yoelii yoelii]
Length = 534
Score = 212 bits (540), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 110/255 (43%), Positives = 145/255 (56%), Gaps = 53/255 (20%)
Query: 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIF 71
+ EK DD +LIATSEQP+CA+HRD L LP++Y+G+S+CFR+E G+HG+D RGI
Sbjct: 286 SNEKSNRDDLFLIATSEQPLCALHRDETLESRYLPLKYVGISSCFRKEAGAHGKDIRGIL 345
Query: 72 RVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKK 131
RVHQF+KVEQF ++ P S+K+ +EMI+ EEFY L I Y++VNIVSGALN+AAA K
Sbjct: 346 RVHQFDKVEQFCISLPQ--TSYKLHEEMIKTCEEFYQSLNIPYKIVNIVSGALNNAAALK 403
Query: 132 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI------------------- 172
D+E +FP SG +RELVSCSNC DYQS L +RY + KI
Sbjct: 404 YDIEGYFPTSGQYRELVSCSNCTDYQSINLNIRYTDSNIKISGITKSSKDKNEENTKDET 463
Query: 173 ---------------------------YATACATTRVICAILETHQTETGVRIPDCLRKF 205
T A R +C +LE +Q G+ +P+ LR
Sbjct: 464 KDEYVDSEYEKFNHDFPIENKNYVHLLNGTMVAGQRFLCCLLENYQNGEGIIVPEKLRP- 522
Query: 206 VPAVYLNEAGEIPFV 220
Y+N IPF+
Sbjct: 523 ----YMNNTEFIPFI 533
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 110/201 (54%), Gaps = 44/201 (21%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI RVHQF+KVEQF ++ P S+K +EMI+ EEFY L I Y++VNIVSGALN
Sbjct: 340 DIRGILRVHQFDKVEQFCISLPQT--SYKLHEEMIKTCEEFYQSLNIPYKIVNIVSGALN 397
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY--------GQTKKMNEKIE- 413
+AAA K D+E +FP SG +RELVSCSNC YQS L +RY G TK +K E
Sbjct: 398 NAAALKYDIEGYFPTSGQYRELVSCSNCTDYQSINLNIRYTDSNIKISGITKSSKDKNEE 457
Query: 414 ----------------------------FVHMLNATACATTRVICAILETHQTETGVRIP 445
+VH+LN T A R +C +LE +Q G+ +P
Sbjct: 458 NTKDETKDEYVDSEYEKFNHDFPIENKNYVHLLNGTMVAGQRFLCCLLENYQNGEGIIVP 517
Query: 446 DCLRKFVPAVYVNEAGEIPFV 466
+ LR Y+N IPF+
Sbjct: 518 EKLRP-----YMNNTEFIPFI 533
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 528 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+ EK DD +LIATSEQP+CA+HRD L LP++Y+G+S+CFR+E A
Sbjct: 286 SNEKSNRDDLFLIATSEQPLCALHRDETLESRYLPLKYVGISSCFRKEAGA 336
>gi|170290556|ref|YP_001737372.1| seryl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
gi|229890221|sp|B1L5G0.1|SYS_KORCO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|170174636|gb|ACB07689.1| seryl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 456
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 136/198 (68%), Gaps = 8/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE P+ A+H E LP Y+G+S CFR+E G+HG+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIATSEHPLVAMHAGDTFTEDELPRLYVGLSPCFRKEAGTHGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQ V + P + + W + +I+N+EE Y +L I YR+VNI SG L +AAKK DL
Sbjct: 301 QFTKVEQIVFSKPEESKYWH--ERLIENAEEIYRELEIPYRIVNIASGDLGASAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-----IYATACATTRVICAILET 189
E WFP G +RELVSCSNC+D+QS RL ++ + ++ + +TA ATTR I AI+E
Sbjct: 359 EGWFPAQGKYRELVSCSNCVDWQSYRLRIKLDRKGRREFVHTLNSTALATTRTISAIVEN 418
Query: 190 HQTETG-VRIPDCLRKFV 206
HQ E G VRIP LRK++
Sbjct: 419 HQREDGSVRIPKALRKYL 436
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 105/151 (69%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF KVEQ V + P + + W + +I+N+EE Y +L I YR+VNI SG L
Sbjct: 292 DTKGIFRVHQFTKVEQIVFSKPEESKYWH--ERLIENAEEIYRELEIPYRIVNIASGDLG 349
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAKK DLE WFP G +RELVSCSNC+ +QS RL ++ + + EFVH LN+TA
Sbjct: 350 ASAAKKYDLEGWFPAQGKYRELVSCSNCVDWQSYRLRIKLDRKGRR----EFVHTLNSTA 405
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AI+E HQ E G VRIP LRK++
Sbjct: 406 LATTRTISAIVENHQREDGSVRIPKALRKYL 436
Score = 47.4 bits (111), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLIATSE P+ A+H E LP Y+G+S CFR+E
Sbjct: 241 KVEGEDLYLIATSEHPLVAMHAGDTFTEDELPRLYVGLSPCFRKEA 286
>gi|148643770|ref|YP_001274283.1| seryl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
gi|222444800|ref|ZP_03607315.1| hypothetical protein METSMIALI_00413 [Methanobrevibacter smithii
DSM 2375]
gi|261350627|ref|ZP_05976044.1| serine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
gi|148552787|gb|ABQ87915.1| seryl-tRNA synthetase, SerS [Methanobrevibacter smithii ATCC 35061]
gi|222434365|gb|EEE41530.1| serine--tRNA ligase [Methanobrevibacter smithii DSM 2375]
gi|288861410|gb|EFC93708.1| serine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
Length = 425
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 134/192 (69%), Gaps = 10/192 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIAT+EQ + A+HRD + LPI+Y +STCFR+E GSHG+DT GIFRVHQFEK
Sbjct: 222 EDLYLIATAEQTLAALHRDEIIAPEDLPIQYCALSTCFRKEAGSHGKDTLGIFRVHQFEK 281
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF+ T+P +ES ++++ +EE Y LG+ Y VV IVS ALN AA K DLEAWF
Sbjct: 282 IEQFIYTTP--EESKNAHKKLLEVTEEIYQKLGLHYHVVAIVSSALNDNAAVKYDLEAWF 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-------QTKQKIYATACATTRVICAILETHQ 191
PGS A+RELVSC+NC DYQ+R+ R+G QT + +TA AT R IC +LE +Q
Sbjct: 340 PGSKAYRELVSCTNCKDYQARKTKTRFGKAGSGDAQTLHTLNSTAIATERTICCLLENYQ 399
Query: 192 TETG-VRIPDCL 202
E G V++PD L
Sbjct: 400 QEDGSVKVPDVL 411
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 102/147 (69%), Gaps = 5/147 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF+ T+P +ES ++++ +EE Y LG+ Y VV IVS ALN
Sbjct: 269 DTLGIFRVHQFEKIEQFIYTTP--EESKNAHKKLLEVTEEIYQKLGLHYHVVAIVSSALN 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA K DLEAWFPGS A+RELVSC+NC YQ+R+ R+G+ + + +H LN+TA
Sbjct: 327 DNAAVKYDLEAWFPGSKAYRELVSCTNCKDYQARKTKTRFGKAGSGDAQT--LHTLNSTA 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCL 448
AT R IC +LE +Q E G V++PD L
Sbjct: 385 IATERTICCLLENYQQEDGSVKVPDVL 411
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D YLIAT+EQ + A+HRD + LPI+Y +STCFR+E
Sbjct: 222 EDLYLIATAEQTLAALHRDEIIAPEDLPIQYCALSTCFRKEA 263
>gi|156086478|ref|XP_001610648.1| seryl-tRNA synthetase [Babesia bovis T2Bo]
gi|154797901|gb|EDO07080.1| seryl-tRNA synthetase, putative [Babesia bovis]
Length = 502
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 138/203 (67%), Gaps = 9/203 (4%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E E + YLIATSEQPI A+HR+ LP++Y G+STCFR+E G+HGRD RGIFR+
Sbjct: 290 EDYEREKLYLIATSEQPIAALHRNETYSIKELPLKYAGLSTCFRREAGAHGRDLRGIFRI 349
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQF+KVEQFV+ D SWK DEMI S+EFY L + YRVV+IV+GALN+AAAKK D
Sbjct: 350 HQFQKVEQFVVCGAED--SWKHHDEMINISKEFYQSLNLPYRVVSIVAGALNNAAAKKYD 407
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ--TKQK-----IYATACATTRVICAI 186
LEA+FP A+RELVSCSNC DYQS L +Y + T Q+ + T A+ R +C I
Sbjct: 408 LEAYFPEMAAYRELVSCSNCTDYQSCDLNTKYFEKDTSQRQLCHMLNGTLVASQRTLCCI 467
Query: 187 LETHQTETGVRIPDCLRKFVPAV 209
LE +QT G+ +P L ++ V
Sbjct: 468 LENYQTPHGLIVPKVLVPYMGGV 490
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 103/153 (67%), Gaps = 4/153 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGIFR+HQF+KVEQFV+ D SWK DEMI S+EFY L + YRVV+IV+GALN
Sbjct: 342 DLRGIFRIHQFQKVEQFVVCGAED--SWKHHDEMINISKEFYQSLNLPYRVVSIVAGALN 399
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEA+FP A+RELVSCSNC YQS L +Y + K + + HMLN T
Sbjct: 400 NAAAKKYDLEAYFPEMAAYRELVSCSNCTDYQSCDLNTKYFE--KDTSQRQLCHMLNGTL 457
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAV 455
A+ R +C ILE +QT G+ +P L ++ V
Sbjct: 458 VASQRTLCCILENYQTPHGLIVPKVLVPYMGGV 490
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 530 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E E + YLIATSEQPI A+HR+ LP++Y G+STCFR+E A
Sbjct: 290 EDYEREKLYLIATSEQPIAALHRNETYSIKELPLKYAGLSTCFRREAGA 338
>gi|13541818|ref|NP_111506.1| seryl-tRNA synthetase [Thermoplasma volcanium GSS1]
gi|30173200|sp|Q979Z3.1|SYS_THEVO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|14325255|dbj|BAB60159.1| tRNA synthetase Ser [Thermoplasma volcanium GSS1]
Length = 441
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 136/204 (66%), Gaps = 7/204 (3%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE I ++ + +L E LPIR GVS CFR+E G+HG+DT+GIFRVH
Sbjct: 239 KIEDEDLYLIATSEHSIASMLSNEFLEEKELPIRVAGVSACFRREAGAHGKDTKGIFRVH 298
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQF+ P D SW L+E++ N+EE Y LGI YRVVN+ SG L AAKK D+
Sbjct: 299 QFNKIEQFIFCKPED--SWDYLEEILSNAEEIYRSLGIPYRVVNVCSGELGRLAAKKYDI 356
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILET 189
EAWFP G FRE+VS SN DYQ+R L ++Y ++ + +TA ATTR++ AI+E
Sbjct: 357 EAWFPAQGKFREIVSASNDTDYQARSLNIKYRKSGGNEFVHTLNSTAIATTRILVAIMEN 416
Query: 190 HQTETGVRIPDCLRKFVPAVYLNE 213
Q + +RIPD L + Y+++
Sbjct: 417 FQEDGRIRIPDVLVPYTGFQYIDK 440
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF K+EQF+ P D SW L+E++ N+EE Y LGI YRVVN+ SG L
Sbjct: 290 DTKGIFRVHQFNKIEQFIFCKPED--SWDYLEEILSNAEEIYRSLGIPYRVVNVCSGELG 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+EAWFP G FRE+VS SN YQ+R L ++Y ++ EFVH LN+TA
Sbjct: 348 RLAAKKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKYRKSGGN----EFVHTLNSTA 403
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNE 459
ATTR++ AI+E Q + +RIPD L + Y+++
Sbjct: 404 IATTRILVAIMENFQEDGRIRIPDVLVPYTGFQYIDK 440
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLIATSE I ++ + +L E LPIR GVS CFR+E A
Sbjct: 239 KIEDEDLYLIATSEHSIASMLSNEFLEEKELPIRVAGVSACFRREAGA 286
>gi|71004692|ref|XP_757012.1| hypothetical protein UM00865.1 [Ustilago maydis 521]
gi|46096706|gb|EAK81939.1| hypothetical protein UM00865.1 [Ustilago maydis 521]
Length = 440
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/150 (68%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DDKYLIATSEQPI A+H D P LPIRY G STCFR+E GSHG+DT GIFRVHQF
Sbjct: 234 DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEAGSHGKDTWGIFRVHQF 293
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P SW ML++M+ NSEEFY L + Y VV IVSGALN+AAA K DLEA
Sbjct: 294 EKVEQFCITDPA--SSWDMLEQMLANSEEFYQSLQLPYHVVAIVSGALNNAAAMKYDLEA 351
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG 166
WFP G ++ELVSCSNC DYQSRRL VR G
Sbjct: 352 WFPFQGEYKELVSCSNCTDYQSRRLDVRCG 381
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 92/138 (66%), Gaps = 2/138 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF +T P SW L++M+ NSEEFY L + Y VV IVSGALN
Sbjct: 283 DTWGIFRVHQFEKVEQFCITDPA--SSWDMLEQMLANSEEFYQSLQLPYHVVAIVSGALN 340
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAA K DLEAWFP G ++ELVSCSNC YQSRRL VR G K + K FVHMLN +A
Sbjct: 341 NAAAMKYDLEAWFPFQGEYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKQTFVHMLNESA 400
Query: 423 CATTRVICAILETHQTET 440
R + T + T
Sbjct: 401 LLRGRELADSRGTQDSPT 418
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEC 576
DDKYLIATSEQPI A+H D P LPIRY G STCFR+E
Sbjct: 234 DDKYLIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEA 277
>gi|159119702|ref|XP_001710069.1| Seryl-tRNA synthetase [Giardia lamblia ATCC 50803]
gi|157438187|gb|EDO82395.1| Seryl-tRNA synthetase [Giardia lamblia ATCC 50803]
Length = 457
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 140/222 (63%), Gaps = 29/222 (13%)
Query: 17 ELDDKYLIATSEQPICAVH--------RDSWLPEASLP--------------IRYLGVST 54
E +DKYLIATSEQP+CA H + + E + IRY G+ST
Sbjct: 234 EGNDKYLIATSEQPLCAYHMGEIINFSKQGQIAELTYNSIKTGKQEKKTLECIRYAGMST 293
Query: 55 CFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAY 114
CFR+EVG HG DT GIFR+HQFEK+EQ V+ D SW M++ MI N F+ L I Y
Sbjct: 294 CFRKEVGRHGHDTLGIFRIHQFEKIEQIVVCKEED--SWDMMEYMIDNCRAFFDSLMIPY 351
Query: 115 RVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY- 173
RVV IVSGALN+AAA K DLEA+FPGS +RELVSCSNC DYQSR L ++Y K K Y
Sbjct: 352 RVVIIVSGALNNAAAMKYDLEAYFPGSNTYRELVSCSNCTDYQSRSLDIKYQDGKDKKYV 411
Query: 174 ----ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYL 211
+T AT R +C ++E +QT TG+++P L+ +V A +L
Sbjct: 412 HLLNSTLSATERTLCCLVENYQTPTGIKVPVPLQSYVGADFL 453
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 108/157 (68%), Gaps = 10/157 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFR+HQFEK+EQ V+ D SW ++ MI N F+ L I YRVV IVSGALN
Sbjct: 305 DTLGIFRIHQFEKIEQIVVCKEED--SWDMMEYMIDNCRAFFDSLMIPYRVVIIVSGALN 362
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY--GQTKKMNEKIEFVHMLNA 420
+AAA K DLEA+FPGS +RELVSCSNC YQSR L ++Y G+ KK +VH+LN+
Sbjct: 363 NAAAMKYDLEAYFPGSNTYRELVSCSNCTDYQSRSLDIKYQDGKDKK------YVHLLNS 416
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
T AT R +C ++E +QT TG+++P L+ +V A ++
Sbjct: 417 TLSATERTLCCLVENYQTPTGIKVPVPLQSYVGADFL 453
>gi|300708459|ref|XP_002996408.1| hypothetical protein NCER_100508 [Nosema ceranae BRL01]
gi|239605708|gb|EEQ82737.1| hypothetical protein NCER_100508 [Nosema ceranae BRL01]
Length = 427
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 142/214 (66%), Gaps = 11/214 (5%)
Query: 1 VIGKGEKVGDSAPEKDEL-DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V+ K ++GD + ++ DD YLIATSEQP+ A+H D + ++ LP Y G S CFR+E
Sbjct: 207 VMSKTAQIGDFDEQLYKVEDDLYLIATSEQPLSALHMDERMVDSDLPKLYCGQSLCFRKE 266
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
G+HG+D GIFRVHQFEK+EQFV+ P +ES + +MI SEEFY L I+Y VV+I
Sbjct: 267 AGAHGKDNSGIFRVHQFEKIEQFVICKP--EESKEYFYKMIGLSEEFYKSLDISYNVVSI 324
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------- 171
VSG N AA+ K DLEA+FP + +RELVSCSNC DYQSR L VRYG K+
Sbjct: 325 VSGEFNDAASIKYDLEAFFPNADKYRELVSCSNCTDYQSRELNVRYGVLKENNKKGYVHM 384
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKF 205
+ +T CA R +C ++E +Q + + +P+ LRK+
Sbjct: 385 LNSTLCAVQRTLCCVVENYQQDDKIIVPEVLRKY 418
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 105/149 (70%), Gaps = 3/149 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV+ P +ES + +MI SEEFY L I+Y VV+IVSG N
Sbjct: 273 DNSGIFRVHQFEKIEQFVICKP--EESKEYFYKMIGLSEEFYKSLDISYNVVSIVSGEFN 330
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+ K DLEA+FP + +RELVSCSNC YQSR L VRYG K+ N+K +VHMLN+T
Sbjct: 331 DAASIKYDLEAFFPNADKYRELVSCSNCTDYQSRELNVRYGVLKENNKK-GYVHMLNSTL 389
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKF 451
CA R +C ++E +Q + + +P+ LRK+
Sbjct: 390 CAVQRTLCCVVENYQQDDKIIVPEVLRKY 418
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 515 REVIGKGEKVGDSAPEKDEL-DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
++V+ K ++GD + ++ DD YLIATSEQP+ A+H D + ++ LP Y G S CFR
Sbjct: 205 KDVMSKTAQIGDFDEQLYKVEDDLYLIATSEQPLSALHMDERMVDSDLPKLYCGQSLCFR 264
Query: 574 QECDA 578
+E A
Sbjct: 265 KEAGA 269
>gi|157133752|ref|XP_001662997.1| phd finger protein [Aedes aegypti]
gi|108881502|gb|EAT45727.1| AAEL003032-PA, partial [Aedes aegypti]
Length = 1041
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 125/176 (71%), Gaps = 40/176 (22%)
Query: 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752
+CC CLG+RSDD NEIVECD CGVTVHEGCYGV ++ S+SST+SSCSTEPWFCE+C+AGI
Sbjct: 1 ICCACLGDRSDDQNEIVECDGCGVTVHEGCYGVSESTSVSSTISSCSTEPWFCEACKAGI 60
Query: 753 AEPTCELCPNFGENHLRGLFENIKNGHAQRDRMRYHACHLRDSRDSSDGDRGGIFKETDV 812
A+P CELCPN +GGIFKETDV
Sbjct: 61 ADPDCELCPN----------------------------------------KGGIFKETDV 80
Query: 813 GKWVHLVCALYIPGVAFGEVDRLSNVTLFEMPYSRWGAKSCALCPDESYARTELAL 868
GKWVHLVCALY+PGVAFGEVD+LS+VTLFEMPY++WGAK+C+LC D +ART + +
Sbjct: 81 GKWVHLVCALYVPGVAFGEVDQLSSVTLFEMPYNKWGAKTCSLCDDTKFARTGVCI 136
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%)
Query: 892 QRKLGKYKVKYVDMKSLRNPPWVPTQKLARPLTSSATLCRALLHKARLMEVDTGAVAQAQ 951
+RKL K++ KYV K +NPPWVPTQK+ R LT+SAT C+ LL KA LM +DT A+ +
Sbjct: 222 ERKLAKHRKKYVIHKETKNPPWVPTQKMPRLLTTSATACKKLLLKAELMGIDTTAMEFQE 281
Query: 952 SDLATLADMNKKWHIPLAFNVEFVAYFLNRNGRLGKLTREQRALAVENDSLQSEQSRLQK 1011
+ + LAD+ KKWHIP AF+VEF+ Y+L+R RL + + + N L EQ RL+
Sbjct: 282 AQMTALADVRKKWHIPPAFSVEFIGYYLDRTVRLKDIKQNLQEQVSTNQKLLEEQQRLRD 341
Query: 1012 TYD 1014
YD
Sbjct: 342 KYD 344
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 41/45 (91%)
Query: 576 CDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADK 620
CDAGMC+TYFHVTCAQ GLLSEA SEE DQADPFYAHC++H+DK
Sbjct: 138 CDAGMCKTYFHVTCAQYAGLLSEAHSEEADQADPFYAHCKIHSDK 182
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 1030 KQAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLMGW 1083
KQ L ++CG+C D H +AKCDTCHLYYHL CL+PPL R PKK+KL GW
Sbjct: 451 KQNSEELLNECGICKRCSDQHLLAKCDTCHLYYHLGCLNPPLTRHPKKSKLYGW 504
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 25/28 (89%)
Query: 632 VCCVCLGERSDDVNEIVECDSCGVTVHE 659
+CC CLG+RSDD NEIVECD CGVTVHE
Sbjct: 1 ICCACLGDRSDDQNEIVECDGCGVTVHE 28
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKK 1077
C +CH + + +CD CH YH CLDPP+ + PK+
Sbjct: 986 CDVCHQPGTNNNLVQCDECHKNYHFGCLDPPVKKSPKR 1023
>gi|84490065|ref|YP_448297.1| seryl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
gi|121721559|sp|Q2NEU9.1|SYS_METST RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|84373384|gb|ABC57654.1| SerS [Methanosphaera stadtmanae DSM 3091]
Length = 424
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+EQ + A+HR+ + LP+RY +STCFR+E GSHG+DT GIFRVH
Sbjct: 218 KVENEDLYLIATAEQTLAALHRNEIIDSEDLPLRYCALSTCFRKEAGSHGKDTLGIFRVH 277
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVEQF+ +P + S +++++ +E Y LG+ Y++V IVS ALN AA K DL
Sbjct: 278 QFEKVEQFIYATPEN--STLEHEKLLEVTEGIYQKLGLPYQIVAIVSSALNDNAAIKYDL 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-------QTKQKIYATACATTRVICAIL 187
EAWFPGSG +RELVSC+NC DYQ+R++ RYG Q + +TA AT R IC IL
Sbjct: 336 EAWFPGSGTYRELVSCTNCKDYQARKINTRYGKAGAGDAQILHTLNSTAIATERTICCIL 395
Query: 188 ETHQTETG-VRIPDCLRKFVPAVYLNEA 214
E +Q E G ++IPD L ++ + EA
Sbjct: 396 ENYQQEDGSIKIPDVLIPYMNGKTIIEA 423
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 108/159 (67%), Gaps = 5/159 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF+ +P + S +++++ +E Y LG+ Y++V IVS ALN
Sbjct: 269 DTLGIFRVHQFEKVEQFIYATPEN--STLEHEKLLEVTEGIYQKLGLPYQIVAIVSSALN 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA K DLEAWFPGSG +RELVSC+NC YQ+R++ RYG+ + +I +H LN+TA
Sbjct: 327 DNAAIKYDLEAWFPGSGTYRELVSCTNCKDYQARKINTRYGKAGAGDAQI--LHTLNSTA 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEA 460
AT R IC ILE +Q E G ++IPD L ++ + EA
Sbjct: 385 IATERTICCILENYQQEDGSIKIPDVLIPYMNGKTIIEA 423
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLIAT+EQ + A+HR+ + LP+RY +STCFR+E
Sbjct: 218 KVENEDLYLIATAEQTLAALHRNEIIDSEDLPLRYCALSTCFRKEA 263
>gi|85000409|ref|XP_954923.1| seryl-tRNA synthetase [Theileria annulata strain Ankara]
gi|65303069|emb|CAI75447.1| seryl-tRNA synthetase, putative [Theileria annulata]
Length = 532
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 149/214 (69%), Gaps = 15/214 (7%)
Query: 14 EKDELDDK-YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFR 72
EKD +K +LIATSEQPI A+HR+ + LPIRY G+STCFR+E G+HG+D RGIFR
Sbjct: 324 EKDVDKNKLFLIATSEQPIAALHRNEVYQKKQLPIRYAGISTCFRREAGAHGKDLRGIFR 383
Query: 73 VHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKL 132
VHQF+KVEQFV+ +P + S + ++M++ SEEFY L + YR+V+IV+GALN AA+KK
Sbjct: 384 VHQFQKVEQFVVCTPEN--SIQEHEQMVKFSEEFYRSLKLPYRIVSIVAGALNKAASKKY 441
Query: 133 DLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQKIY---ATACATTRVICA 185
DLEAWFPG +RELVSCSNC DYQ++ L ++ Q ++ ++ T A+ R +C
Sbjct: 442 DLEAWFPGYEDYRELVSCSNCTDYQAQNLNSKFYDKNNQDRKHVHMLNGTLVASQRCLCC 501
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPF 219
ILE +QT G+ +P+ L VP Y++ IPF
Sbjct: 502 ILENYQTPDGIIVPEPL---VP--YMDGLEFIPF 530
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 112/163 (68%), Gaps = 9/163 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGIFRVHQF+KVEQFV+ +P + S + ++M++ SEEFY L + YR+V+IV+GALN
Sbjct: 377 DLRGIFRVHQFQKVEQFVVCTPEN--SIQEHEQMVKFSEEFYRSLKLPYRIVSIVAGALN 434
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+KK DLEAWFPG +RELVSCSNC YQ++ L ++ K N+ + VHMLN T
Sbjct: 435 KAASKKYDLEAWFPGYEDYRELVSCSNCTDYQAQNLNSKF--YDKNNQDRKHVHMLNGTL 492
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPF 465
A+ R +C ILE +QT G+ +P+ L VP Y++ IPF
Sbjct: 493 VASQRCLCCILENYQTPDGIIVPEPL---VP--YMDGLEFIPF 530
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 530 EKDELDDK-YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
EKD +K +LIATSEQPI A+HR+ + LPIRY G+STCFR+E A
Sbjct: 324 EKDVDKNKLFLIATSEQPIAALHRNEVYQKKQLPIRYAGISTCFRREAGA 373
>gi|254168130|ref|ZP_04874977.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|197622896|gb|EDY35464.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
Length = 442
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 138/202 (68%), Gaps = 7/202 (3%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D Y+IAT+E P+ A+H L SLP++Y+G+S CFR+E G+HG+DT+GIFRVH
Sbjct: 238 KIEGEDLYMIATAEHPLVAMHMKEILDPNSLPLKYVGISPCFRKEAGAHGKDTKGIFRVH 297
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
F KVEQ V + P +ES +++E+I+N+EE L + YRV+NI SG L AAKK D+
Sbjct: 298 NFYKVEQVVFSKP--EESAILMEELIKNAEEILQKLELPYRVINICSGELGAVAAKKYDI 355
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY---GQTK--QKIYATACATTRVICAILET 189
E W P FRE+VSCSNCL+YQ+RRL++RY G+ K + +TA ATTR+I AI+E
Sbjct: 356 EVWMPAQQKFREVVSCSNCLEYQARRLMIRYRDKGELKFVHTLNSTALATTRIIVAIMEN 415
Query: 190 HQTETGVRIPDCLRKFVPAVYL 211
Q + G+RIP L + Y+
Sbjct: 416 FQEDKGIRIPKALVPYTGFEYI 437
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 103/155 (66%), Gaps = 6/155 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVH F KVEQ V + P +ES ++E+I+N+EE L + YRV+NI SG L
Sbjct: 289 DTKGIFRVHNFYKVEQVVFSKP--EESAILMEELIKNAEEILQKLELPYRVINICSGELG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W P FRE+VSCSNCL YQ+RRL++RY ++ +FVH LN+TA
Sbjct: 347 AVAAKKYDIEVWMPAQQKFREVVSCSNCLEYQARRLMIRYRDKGEL----KFVHTLNSTA 402
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
ATTR+I AI+E Q + G+RIP L + Y+
Sbjct: 403 LATTRIIVAIMENFQEDKGIRIPKALVPYTGFEYI 437
Score = 53.1 bits (126), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D Y+IAT+E P+ A+H L SLP++Y+G+S CFR+E A
Sbjct: 238 KIEGEDLYMIATAEHPLVAMHMKEILDPNSLPLKYVGISPCFRKEAGA 285
>gi|308161777|gb|EFO64212.1| Seryl-tRNA synthetase [Giardia lamblia P15]
Length = 457
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 138/222 (62%), Gaps = 29/222 (13%)
Query: 17 ELDDKYLIATSEQPICAVHRDSW-----------LPEASLP-----------IRYLGVST 54
E +DKYLIATSEQP+CA H L S+ IRY G+ST
Sbjct: 234 EGNDKYLIATSEQPLCAYHMGEVVNFSKQGQRVELTYNSIKTGKQEKKTLECIRYAGMST 293
Query: 55 CFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAY 114
CFR+EVG HG DT GIFR+HQFEK+EQ V+ D SW M++ MI N F+ L I Y
Sbjct: 294 CFRKEVGRHGHDTLGIFRIHQFEKIEQIVVCKEED--SWDMMEYMIDNCRAFFDSLMIPY 351
Query: 115 RVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY- 173
RVV IVSGALN+AAA K DLEA+FPGS +RELVSCSNC DYQSR L ++Y K K Y
Sbjct: 352 RVVIIVSGALNNAAAMKYDLEAYFPGSDTYRELVSCSNCTDYQSRSLDIKYQDGKDKKYV 411
Query: 174 ----ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYL 211
+T AT R +C ++E +QT TG+R+P L+ +V +L
Sbjct: 412 HLLNSTLSATERTLCCLVENYQTSTGIRVPVPLQSYVGTDFL 453
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 105/152 (69%), Gaps = 10/152 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFR+HQFEK+EQ V+ D SW ++ MI N F+ L I YRVV IVSGALN
Sbjct: 305 DTLGIFRIHQFEKIEQIVVCKEED--SWDMMEYMIDNCRAFFDSLMIPYRVVIIVSGALN 362
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY--GQTKKMNEKIEFVHMLNA 420
+AAA K DLEA+FPGS +RELVSCSNC YQSR L ++Y G+ KK +VH+LN+
Sbjct: 363 NAAAMKYDLEAYFPGSDTYRELVSCSNCTDYQSRSLDIKYQDGKDKK------YVHLLNS 416
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFV 452
T AT R +C ++E +QT TG+R+P L+ +V
Sbjct: 417 TLSATERTLCCLVENYQTSTGIRVPVPLQSYV 448
>gi|325959950|ref|YP_004291416.1| seryl-tRNA synthetase [Methanobacterium sp. AL-21]
gi|325331382|gb|ADZ10444.1| Seryl-tRNA synthetase [Methanobacterium sp. AL-21]
Length = 426
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 143/208 (68%), Gaps = 18/208 (8%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D ++IATSEQ + A+HR + E +LP +Y G+STCFR+E GSHGRDT GIFRVH
Sbjct: 220 KIEGEDLFMIATSEQTLAALHRGEIIDERTLPRKYCGLSTCFRREAGSHGRDTLGIFRVH 279
Query: 75 QFEKVEQFVLTSPHDDESWKML-DEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
QFEK+EQF+ D ES + L E+++N+E Y LG+ YR+V+IVSG LN AAKK D
Sbjct: 280 QFEKIEQFIFC---DAESSRDLHQELLENAELIYQKLGLPYRIVSIVSGELNDNAAKKYD 336
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG--------QTKQKIYATACATTRVICA 185
LEAWFPGS +RELVSC+NC DYQ+R+L RYG + + +TA AT R IC
Sbjct: 337 LEAWFPGSSTYRELVSCTNCGDYQARKLNARYGIHGDSDSLKMCHTLNSTAIATERTICC 396
Query: 186 ILETHQTETG-VRIPDCLRKFVPAVYLN 212
ILE +Q E G +++P+ L +P Y+N
Sbjct: 397 ILENYQQEDGTIKVPEVL---IP--YMN 419
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/148 (54%), Positives = 104/148 (70%), Gaps = 6/148 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTL-DEMIQNSEEFYADLGIAYRVVNIVSGAL 361
DT GIFRVHQFEK+EQF+ D ES + L E+++N+E Y LG+ YR+V+IVSG L
Sbjct: 271 DTLGIFRVHQFEKIEQFIFC---DAESSRDLHQELLENAELIYQKLGLPYRIVSIVSGEL 327
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
N AAKK DLEAWFPGS +RELVSC+NC YQ+R+L RYG ++ ++ H LN+T
Sbjct: 328 NDNAAKKYDLEAWFPGSSTYRELVSCTNCGDYQARKLNARYG-IHGDSDSLKMCHTLNST 386
Query: 422 ACATTRVICAILETHQTETG-VRIPDCL 448
A AT R IC ILE +Q E G +++P+ L
Sbjct: 387 AIATERTICCILENYQQEDGTIKVPEVL 414
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D ++IATSEQ + A+HR + E +LP +Y G+STCFR+E
Sbjct: 220 KIEGEDLFMIATSEQTLAALHRGEIIDERTLPRKYCGLSTCFRREA 265
>gi|254168019|ref|ZP_04874867.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|289596026|ref|YP_003482722.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|197623062|gb|EDY35629.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|289533813|gb|ADD08160.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469]
Length = 442
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 138/202 (68%), Gaps = 7/202 (3%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D Y+IAT+E P+ A+H L SLP++Y+G+S CFR+E G+HG+DT+GIFRVH
Sbjct: 238 KIEGEDLYMIATAEHPLVAMHMKEILDPNSLPLKYVGISPCFRKEAGAHGKDTKGIFRVH 297
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
F KVEQ V + P +ES +++E+I+N+EE L + YRV+NI SG L AAKK D+
Sbjct: 298 NFYKVEQVVFSKP--EESAILMEELIKNAEEILQKLELPYRVINICSGELGAVAAKKYDI 355
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY---GQTK--QKIYATACATTRVICAILET 189
E W P FRE+VSCSNCL+YQ+RRL++RY G+ K + +TA ATTR++ AI+E
Sbjct: 356 EVWMPAQQKFREVVSCSNCLEYQARRLMIRYRDKGELKFVHTLNSTALATTRIMVAIMEN 415
Query: 190 HQTETGVRIPDCLRKFVPAVYL 211
Q + G+RIP L + Y+
Sbjct: 416 FQEDRGIRIPKALVPYTSFEYI 437
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 103/155 (66%), Gaps = 6/155 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVH F KVEQ V + P +ES ++E+I+N+EE L + YRV+NI SG L
Sbjct: 289 DTKGIFRVHNFYKVEQVVFSKP--EESAILMEELIKNAEEILQKLELPYRVINICSGELG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W P FRE+VSCSNCL YQ+RRL++RY ++ +FVH LN+TA
Sbjct: 347 AVAAKKYDIEVWMPAQQKFREVVSCSNCLEYQARRLMIRYRDKGEL----KFVHTLNSTA 402
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
ATTR++ AI+E Q + G+RIP L + Y+
Sbjct: 403 LATTRIMVAIMENFQEDRGIRIPKALVPYTSFEYI 437
Score = 53.1 bits (126), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D Y+IAT+E P+ A+H L SLP++Y+G+S CFR+E A
Sbjct: 238 KIEGEDLYMIATAEHPLVAMHMKEILDPNSLPLKYVGISPCFRKEAGA 285
>gi|253741836|gb|EES98697.1| Seryl-tRNA synthetase [Giardia intestinalis ATCC 50581]
Length = 457
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 140/222 (63%), Gaps = 29/222 (13%)
Query: 17 ELDDKYLIATSEQPICAVH-----------RDSWLPEASLP-----------IRYLGVST 54
E +DKYLIATSEQP+CA H + + L S+ IRY G+ST
Sbjct: 234 EGNDKYLIATSEQPLCAYHMGEVINFSKQGQATELTYNSIKTGKQEKKTVECIRYAGMST 293
Query: 55 CFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAY 114
CFR+EVG HG DT GIFR+HQFEK+EQ V+ D SW M++ MI N F+ L I Y
Sbjct: 294 CFRKEVGRHGHDTLGIFRIHQFEKIEQIVVCKEED--SWDMMEYMIDNCRAFFDSLMIPY 351
Query: 115 RVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY- 173
RVV IVSGALN+AAA K DLEA+FPGS +RELVSCSNC DYQSR L ++Y K K Y
Sbjct: 352 RVVIIVSGALNNAAAMKYDLEAYFPGSDTYRELVSCSNCTDYQSRSLDIKYQDGKDKKYV 411
Query: 174 ----ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYL 211
+T AT R +C ++E +QT TG+++P L+ +V +L
Sbjct: 412 HLLNSTLSATERTLCCLVENYQTPTGIKVPAPLQDYVGTDFL 453
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 105/152 (69%), Gaps = 10/152 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFR+HQFEK+EQ V+ D SW ++ MI N F+ L I YRVV IVSGALN
Sbjct: 305 DTLGIFRIHQFEKIEQIVVCKEED--SWDMMEYMIDNCRAFFDSLMIPYRVVIIVSGALN 362
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY--GQTKKMNEKIEFVHMLNA 420
+AAA K DLEA+FPGS +RELVSCSNC YQSR L ++Y G+ KK +VH+LN+
Sbjct: 363 NAAAMKYDLEAYFPGSDTYRELVSCSNCTDYQSRSLDIKYQDGKDKK------YVHLLNS 416
Query: 421 TACATTRVICAILETHQTETGVRIPDCLRKFV 452
T AT R +C ++E +QT TG+++P L+ +V
Sbjct: 417 TLSATERTLCCLVENYQTPTGIKVPAPLQDYV 448
>gi|119719325|ref|YP_919820.1| seryl-tRNA synthetase [Thermofilum pendens Hrk 5]
gi|119524445|gb|ABL77817.1| seryl-tRNA synthetase [Thermofilum pendens Hrk 5]
Length = 452
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 131/197 (66%), Gaps = 11/197 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI T+E PI A+H L E LP+ Y GVS FR+E G+HG+DT+GIFRVH FEK
Sbjct: 245 EDLYLIGTAEHPIAALHAGEVLAEKELPLLYAGVSESFRKEAGAHGKDTKGIFRVHHFEK 304
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV + P DESW+ +++I+N+EE + L I YR+VNI SG L AAKK DLEAW
Sbjct: 305 VEQFVFSHP--DESWEWHEKLIRNAEELWQGLEIPYRIVNIASGDLGVVAAKKYDLEAWM 362
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--------QKIYATACATTRVICAILETH 190
P G +RE+VSCSNC D+QS RL +RY + + + +TA A R I AI+E H
Sbjct: 363 PAQGKYREMVSCSNCTDWQSYRLNIRYAEVRGGPSKGYVHTLNSTALAIQRTITAIVENH 422
Query: 191 QTETG-VRIPDCLRKFV 206
QT G V++P L K++
Sbjct: 423 QTPDGYVKVPKALHKYL 439
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVH FEKVEQFV + P DESW+ +++I+N+EE + L I YR+VNI SG L
Sbjct: 292 DTKGIFRVHHFEKVEQFVFSHP--DESWEWHEKLIRNAEELWQGLEIPYRIVNIASGDLG 349
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLEAW P G +RE+VSCSNC +QS RL +RY + + K +VH LN+TA
Sbjct: 350 VVAAKKYDLEAWMPAQGKYREMVSCSNCTDWQSYRLNIRYAEVRGGPSK-GYVHTLNSTA 408
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R I AI+E HQT G V++P L K++
Sbjct: 409 LAIQRTITAIVENHQTPDGYVKVPKALHKYL 439
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D YLI T+E PI A+H L E LP+ Y GVS FR+E A
Sbjct: 245 EDLYLIGTAEHPIAALHAGEVLAEKELPLLYAGVSESFRKEAGA 288
>gi|403223220|dbj|BAM41351.1| seryl-tRNA synthetase [Theileria orientalis strain Shintoku]
Length = 534
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 140/205 (68%), Gaps = 14/205 (6%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
+LIATSEQP+ A+HR+ LPI+Y G+STCFR+E G+HGRD +GIFRVHQF+KVEQ
Sbjct: 335 FLIATSEQPLAALHRNETYQRRQLPIKYAGLSTCFRREAGAHGRDLKGIFRVHQFQKVEQ 394
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
FV+ SP + S +M + M+ SEEFY L + +RVV+IV+GALN AA+KK DLEAWFPG
Sbjct: 395 FVVCSP--ESSKEMHEHMLALSEEFYRSLKLPFRVVSIVAGALNKAASKKYDLEAWFPGY 452
Query: 142 GAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIY-----ATACATTRVICAILETHQTET 194
+RELVSCSNC DYQ+R L RY + K Y T A+ R +C +LE +QT
Sbjct: 453 NDYRELVSCSNCTDYQARNLNSRYYDRNNQDKTYLHMLNGTLVASQRCLCCVLENYQTPD 512
Query: 195 GVRIPDCLRKFVPAVYLNEAGEIPF 219
GV +P+ L VP Y++ IP+
Sbjct: 513 GVIVPEPL---VP--YMDGQEFIPY 532
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 108/158 (68%), Gaps = 12/158 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDE-MIQNSEEFYADLGIAYRVVNIVSGAL 361
D +GIFRVHQF+KVEQFV+ SP ES K + E M+ SEEFY L + +RVV+IV+GAL
Sbjct: 379 DLKGIFRVHQFQKVEQFVVCSP---ESSKEMHEHMLALSEEFYRSLKLPFRVVSIVAGAL 435
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
N AA+KK DLEAWFPG +RELVSCSNC YQ+R L RY + N+ ++HMLN T
Sbjct: 436 NKAASKKYDLEAWFPGYNDYRELVSCSNCTDYQARNLNSRY--YDRNNQDKTYLHMLNGT 493
Query: 422 ACATTRVICAILETHQTETGVRIPDCL------RKFVP 453
A+ R +C +LE +QT GV +P+ L ++F+P
Sbjct: 494 LVASQRCLCCVLENYQTPDGVIVPEPLVPYMDGQEFIP 531
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+LIATSEQP+ A+HR+ LPI+Y G+STCFR+E A
Sbjct: 335 FLIATSEQPLAALHRNETYQRRQLPIKYAGLSTCFRREAGA 375
>gi|396081219|gb|AFN82837.1| seryl-tRNA synthetase [Encephalitozoon romaleae SJ-2008]
Length = 429
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 134/201 (66%), Gaps = 10/201 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLIATSEQ + A++ D + +P + G S CFR+E G+HG+D G+FRVHQFEK
Sbjct: 227 DDLYLIATSEQALAALYMDERMIPQEVPKKLCGQSLCFRKEAGAHGKDNAGLFRVHQFEK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ P ES K +EMI+ EEFY L I+Y VV+IVSG LN AAA K DLEA+F
Sbjct: 287 IEQFVICEP--SESRKHHEEMIRVCEEFYQSLDISYNVVSIVSGELNDAAAIKYDLEAYF 344
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---KIY-----ATACATTRVICAILETH 190
P + +RELVSCSNC DYQSR L +RYG K+ K+Y T CA R +C I+E +
Sbjct: 345 PNADKYRELVSCSNCTDYQSRELEIRYGVVKENNRKVYVHLLNGTMCAIQRALCCIVENY 404
Query: 191 QTETGVRIPDCLRKFVPAVYL 211
Q E GV IPD L+ + A ++
Sbjct: 405 QKENGVGIPDVLQGYFGADFI 425
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 108/155 (69%), Gaps = 3/155 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEK+EQFV+ P ES K +EMI+ EEFY L I+Y VV+IVSG LN
Sbjct: 274 DNAGLFRVHQFEKIEQFVICEP--SESRKHHEEMIRVCEEFYQSLDISYNVVSIVSGELN 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLEA+FP + +RELVSCSNC YQSR L +RYG K+ N K+ +VH+LN T
Sbjct: 332 DAAAIKYDLEAYFPNADKYRELVSCSNCTDYQSRELEIRYGVVKENNRKV-YVHLLNGTM 390
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
CA R +C I+E +Q E GV IPD L+ + A ++
Sbjct: 391 CAIQRALCCIVENYQKENGVGIPDVLQGYFGADFI 425
Score = 43.5 bits (101), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 515 REVIGKGEKVGDSAPEKDEL----DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 570
R+V+ K ++ D D+L DD YLIATSEQ + A++ D + +P + G S
Sbjct: 206 RDVMAKTSQLSDF---DDQLYKVEDDLYLIATSEQALAALYMDERMIPQEVPKKLCGQSL 262
Query: 571 CFRQEC------DAGMCRTY 584
CFR+E +AG+ R +
Sbjct: 263 CFRKEAGAHGKDNAGLFRVH 282
>gi|19074152|ref|NP_584758.1| SERYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
gi|74697584|sp|Q8SS48.1|SYS_ENCCU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|19068794|emb|CAD25262.1| SERYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
Length = 429
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 132/195 (67%), Gaps = 10/195 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLIATSEQ + A++ D + +P ++ G S CFR+E G+HG+D G+FRVHQFEK
Sbjct: 227 DDLYLIATSEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGAHGKDNAGLFRVHQFEK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ P +ES K +EMI+ EEFY L I+Y VV IVSG LN AAA K DLEA+F
Sbjct: 287 IEQFVICGP--EESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELNDAAAIKYDLEAYF 344
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---KIY-----ATACATTRVICAILETH 190
P + +RELVSCSNC DYQSR L +RYG K+ KIY T CA R +C I+E +
Sbjct: 345 PSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNRKIYVHLLNGTMCAVQRALCCIVENY 404
Query: 191 QTETGVRIPDCLRKF 205
QT G+ IPD L+ +
Sbjct: 405 QTGDGIAIPDVLQGY 419
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 105/149 (70%), Gaps = 3/149 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEK+EQFV+ P +ES K +EMI+ EEFY L I+Y VV IVSG LN
Sbjct: 274 DNAGLFRVHQFEKIEQFVICGP--EESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELN 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLEA+FP + +RELVSCSNC YQSR L +RYG K+ N KI +VH+LN T
Sbjct: 332 DAAAIKYDLEAYFPSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNRKI-YVHLLNGTM 390
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKF 451
CA R +C I+E +QT G+ IPD L+ +
Sbjct: 391 CAVQRALCCIVENYQTGDGIAIPDVLQGY 419
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DD YLIATSEQ + A++ D + +P ++ G S CFR+E A
Sbjct: 227 DDLYLIATSEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGA 270
>gi|284161908|ref|YP_003400531.1| seryl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
gi|284011905|gb|ADB57858.1| seryl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
Length = 454
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 136/204 (66%), Gaps = 11/204 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE P+ ++H + L E LP+ Y GVS CFR+E G+HG+DT+GIFRVH
Sbjct: 240 KIEDEDLYLIATSEHPLASMHMNEVLAEDELPLLYAGVSPCFRKEAGAHGKDTKGIFRVH 299
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
F KVEQFV P ++SW +++I+N+E+ + LGI YRVVN+ SG L A+KK DL
Sbjct: 300 IFNKVEQFVYCLP--EQSWDWHEKLIENAEKLWQGLGIPYRVVNVCSGDLGIVASKKYDL 357
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--------QKIYATACATTRVICAI 186
EAW P G FRE+VSCSNC D+QS RL +RY + K + +TA ATTR I AI
Sbjct: 358 EAWMPAQGKFREMVSCSNCTDWQSFRLNIRYAEKKGAPSKGFVHTLNSTAIATTRAITAI 417
Query: 187 LETHQTETG-VRIPDCLRKFVPAV 209
+E Q E G V IP LRK++ +
Sbjct: 418 IENFQLEDGRVEIPKVLRKYLEPI 441
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 104/154 (67%), Gaps = 4/154 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVH F KVEQFV P ++SW +++I+N+E+ + LGI YRVVN+ SG L
Sbjct: 291 DTKGIFRVHIFNKVEQFVYCLP--EQSWDWHEKLIENAEKLWQGLGIPYRVVNVCSGDLG 348
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A+KK DLEAW P G FRE+VSCSNC +QS RL +RY + K K FVH LN+TA
Sbjct: 349 IVASKKYDLEAWMPAQGKFREMVSCSNCTDWQSFRLNIRYAEKKGAPSK-GFVHTLNSTA 407
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AI+E Q E G V IP LRK++ +
Sbjct: 408 IATTRAITAIIENFQLEDGRVEIPKVLRKYLEPI 441
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLIATSE P+ ++H + L E LP+ Y GVS CFR+E A
Sbjct: 240 KIEDEDLYLIATSEHPLASMHMNEVLAEDELPLLYAGVSPCFRKEAGA 287
>gi|449328955|gb|AGE95230.1| seryl tRNA synthetase [Encephalitozoon cuniculi]
Length = 429
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 132/195 (67%), Gaps = 10/195 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLIATSEQ + A++ D + +P ++ G S CFR+E G+HG+D G+FRVHQFEK
Sbjct: 227 DDLYLIATSEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGAHGKDNAGLFRVHQFEK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ P +ES K +EMI+ EEFY L I+Y VV IVSG LN AAA K DLEA+F
Sbjct: 287 IEQFVICGP--EESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELNDAAAIKYDLEAYF 344
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---KIY-----ATACATTRVICAILETH 190
P + +RELVSCSNC DYQSR L +RYG K+ KIY T CA R +C I+E +
Sbjct: 345 PSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNRKIYVHLLNGTMCAIQRALCCIVENY 404
Query: 191 QTETGVRIPDCLRKF 205
QT G+ IPD L+ +
Sbjct: 405 QTGDGIAIPDVLQGY 419
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 105/149 (70%), Gaps = 3/149 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEK+EQFV+ P +ES K +EMI+ EEFY L I+Y VV IVSG LN
Sbjct: 274 DNAGLFRVHQFEKIEQFVICGP--EESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELN 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLEA+FP + +RELVSCSNC YQSR L +RYG K+ N KI +VH+LN T
Sbjct: 332 DAAAIKYDLEAYFPSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNRKI-YVHLLNGTM 390
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKF 451
CA R +C I+E +QT G+ IPD L+ +
Sbjct: 391 CAIQRALCCIVENYQTGDGIAIPDVLQGY 419
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DD YLIATSEQ + A++ D + +P ++ G S CFR+E A
Sbjct: 227 DDLYLIATSEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGA 270
>gi|327400152|ref|YP_004340991.1| seryl-tRNA synthetase [Archaeoglobus veneficus SNP6]
gi|327315660|gb|AEA46276.1| Seryl-tRNA synthetase [Archaeoglobus veneficus SNP6]
Length = 453
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 138/204 (67%), Gaps = 11/204 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D +LIATSE P+ A+H + + E LP+ Y GVS CFR+E G+HG+DT+GIFRVH
Sbjct: 238 KVEGEDLFLIATSEHPLAAMHMNEVIAEDDLPLLYAGVSPCFRKEAGAHGKDTKGIFRVH 297
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ESW+ +++I+N+E+ + L I YR+VNI +G + AAKK DL
Sbjct: 298 QFNKVEQFVYCLP--EESWEWHEKLIENAEKLWQGLEIPYRIVNICTGDIGIVAAKKYDL 355
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICAI 186
EAW P G +RE+VSCSNC D+QS RL +RY + K K + +TA ATTR I AI
Sbjct: 356 EAWMPAQGKYREMVSCSNCTDWQSYRLNIRYAEEKGKPSKGFVHTLNSTAIATTRAITAI 415
Query: 187 LETHQTETG-VRIPDCLRKFVPAV 209
+E Q E G V IP LRK++ +
Sbjct: 416 IENFQLEDGRVEIPKVLRKYLEPI 439
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 105/154 (68%), Gaps = 4/154 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF KVEQFV P +ESW+ +++I+N+E+ + L I YR+VNI +G +
Sbjct: 289 DTKGIFRVHQFNKVEQFVYCLP--EESWEWHEKLIENAEKLWQGLEIPYRIVNICTGDIG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLEAW P G +RE+VSCSNC +QS RL +RY + K K FVH LN+TA
Sbjct: 347 IVAAKKYDLEAWMPAQGKYREMVSCSNCTDWQSYRLNIRYAEEKGKPSK-GFVHTLNSTA 405
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AI+E Q E G V IP LRK++ +
Sbjct: 406 IATTRAITAIIENFQLEDGRVEIPKVLRKYLEPI 439
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D +LIATSE P+ A+H + + E LP+ Y GVS CFR+E A
Sbjct: 238 KVEGEDLFLIATSEHPLAAMHMNEVIAEDDLPLLYAGVSPCFRKEAGA 285
>gi|15921761|ref|NP_377430.1| seryl-tRNA synthetase [Sulfolobus tokodaii str. 7]
gi|30173199|sp|Q970Y4.1|SYS_SULTO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|342306504|dbj|BAK54593.1| seryl-tRNA synthetase [Sulfolobus tokodaii str. 7]
Length = 453
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 137/199 (68%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E PI A++ +P+ LP++Y+G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHPIAALYFKEEIPKEKLPLKYVGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ +SP D SWK+ +E+I+N+EE + LG+ YRV+NI +G L AAKK DL
Sbjct: 301 QFHKVEQFIFSSPED--SWKLHEELIRNAEEIFQGLGLPYRVINIATGDLGACAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P FRE+VSCSNCLD+Q+ R+ +RY + K + +TA A+TR I AILE
Sbjct: 359 EVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEKGGKKGYVHTLNSTAIASTRTITAILE 418
Query: 189 THQTETG-VRIPDCLRKFV 206
+Q E G V IP L+K++
Sbjct: 419 NYQREDGVVEIPKVLKKYL 437
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 106/154 (68%), Gaps = 6/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ +SP D SWK +E+I+N+EE + LG+ YRV+NI +G
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSSPED--SWKLHEELIRNAEEIFQGLGLPYRVINIATG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNCL +Q+ R+ +RY + K +VH LN
Sbjct: 347 DLGACAAKKYDLEVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEK---GGKKGYVHTLN 403
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V IP L+K++
Sbjct: 404 STAIASTRTITAILENYQREDGVVEIPKVLKKYL 437
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E PI A++ +P+ LP++Y+G+S FR+E A G+ R +
Sbjct: 241 KIENEDLYLIATAEHPIAALYFKEEIPKEKLPLKYVGISPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>gi|303279198|ref|XP_003058892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460052|gb|EEH57347.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 382
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 107/139 (76%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DKYLIATSEQ C+ R W+ LP+R+ G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 232 EDKYLIATSEQTCCSYLRKRWIQPKELPMRFAGYSTCFRKEAGSHGRDTLGIFRVHQFEK 291
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF+ SP DESWK ++ +I NSE FY LGI Y VVNIVSG LN AAAKK DLEAWF
Sbjct: 292 VEQFIAVSPDGDESWKEMERLIGNSEAFYQSLGIPYNVVNIVSGELNDAAAKKYDLEAWF 351
Query: 139 PGSGAFRELVSCSNCLDYQ 157
P S FRELVSCSNCLD+Q
Sbjct: 352 PSSKTFRELVSCSNCLDFQ 370
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 72/92 (78%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF+ SP DESWK ++ +I NSE FY LGI Y VVNIVSG LN
Sbjct: 279 DTLGIFRVHQFEKVEQFIAVSPDGDESWKEMERLIGNSEAFYQSLGIPYNVVNIVSGELN 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQ 394
AAAKK DLEAWFP S FRELVSCSNCL +Q
Sbjct: 339 DAAAKKYDLEAWFPSSKTFRELVSCSNCLDFQ 370
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+DKYLIATSEQ C+ R W+ LP+R+ G STCFR+E
Sbjct: 232 EDKYLIATSEQTCCSYLRKRWIQPKELPMRFAGYSTCFRKEA 273
>gi|330040421|ref|XP_003239904.1| seryl-tRNA synthetase (serin-tRNA ligase) [Cryptomonas paramecium]
gi|327206830|gb|AEA39006.1| seryl-tRNA synthetase (serin-tRNA ligase) [Cryptomonas paramecium]
Length = 442
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 135/198 (68%), Gaps = 8/198 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E +K+LIATSEQPI A+H + + + +LPI+Y G S+CFR+E GSHG+DT GIFRVHQF
Sbjct: 224 EETEKFLIATSEQPISALHVNQKILKKNLPIKYAGFSSCFRKESGSHGKDTAGIFRVHQF 283
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF++ + SW E+++N+ +FY L I ++V+NI S N+ A+KK D+
Sbjct: 284 EKIEQFIICEREEISSWVFFQEILKNARDFYFLLNIPFKVINISSTTFNNTASKKADVLG 343
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLV-----RYGQTKQKIY---ATACATTRVICAILE 188
WFP S FRELVSCSNC D+Q+R L + + + + +Y +T CATTRVIC ILE
Sbjct: 344 WFPASNTFRELVSCSNCTDFQARNLNIISDTNFHTKNNKFVYMLNSTLCATTRVICCILE 403
Query: 189 THQTETGVRIPDCLRKFV 206
+Q + + IP L+K++
Sbjct: 404 NYQFDKFIHIPRVLKKYM 421
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 100/150 (66%), Gaps = 1/150 (0%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF++ + SW E+++N+ +FY L I ++V+NI S N
Sbjct: 273 DTAGIFRVHQFEKIEQFIICEREEISSWVFFQEILKNARDFYFLLNIPFKVINISSTTFN 332
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+ A+KK D+ WFP S FRELVSCSNC +Q+R L + T + +FV+MLN+T
Sbjct: 333 NTASKKADVLGWFPASNTFRELVSCSNCTDFQARNLNI-ISDTNFHTKNNKFVYMLNSTL 391
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452
CATTRVIC ILE +Q + + IP L+K++
Sbjct: 392 CATTRVICCILENYQFDKFIHIPRVLKKYM 421
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC------DAGMCRTY 584
E +K+LIATSEQPI A+H + + + +LPI+Y G S+CFR+E AG+ R +
Sbjct: 224 EETEKFLIATSEQPISALHVNQKILKKNLPIKYAGFSSCFRKESGSHGKDTAGIFRVH 281
>gi|16081587|ref|NP_393946.1| seryl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
gi|13878795|sp|Q9HKX5.1|SYS_THEAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|10639638|emb|CAC11610.1| probable seryl-tRNA synthetase [Thermoplasma acidophilum]
Length = 441
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 132/202 (65%), Gaps = 7/202 (3%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE I A+ + +L E LP+R G+S CFR+E G+HG+DT+GIFRVH
Sbjct: 239 KIEGEDLYLIATSEHSIAAMLSNQFLEEKDLPLRVAGISACFRREAGAHGKDTKGIFRVH 298
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQFV P D SW L+E++ N+E Y LGI YRVVN+ SG L AAKK D+
Sbjct: 299 QFNKIEQFVFCKPED--SWDFLEEILGNAEAIYRSLGIPYRVVNVCSGELGRLAAKKYDI 356
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILET 189
EAWFP G FRE+VS SN DYQ+R L ++Y ++ + +TA ATTR++ AI+E
Sbjct: 357 EAWFPAQGKFREIVSASNDTDYQARSLNIKYRTSEGNRFVHTLNSTAIATTRILVAIMEN 416
Query: 190 HQTETGVRIPDCLRKFVPAVYL 211
Q +RIPD L + Y+
Sbjct: 417 FQEGDRIRIPDVLVPYTGFQYI 438
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 101/155 (65%), Gaps = 6/155 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF K+EQFV P D SW L+E++ N+E Y LGI YRVVN+ SG L
Sbjct: 290 DTKGIFRVHQFNKIEQFVFCKPED--SWDFLEEILGNAEAIYRSLGIPYRVVNVCSGELG 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+EAWFP G FRE+VS SN YQ+R L ++Y + +E FVH LN+TA
Sbjct: 348 RLAAKKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKY----RTSEGNRFVHTLNSTA 403
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
ATTR++ AI+E Q +RIPD L + Y+
Sbjct: 404 IATTRILVAIMENFQEGDRIRIPDVLVPYTGFQYI 438
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLIATSE I A+ + +L E LP+R G+S CFR+E A
Sbjct: 239 KIEGEDLYLIATSEHSIAAMLSNQFLEEKDLPLRVAGISACFRREAGA 286
>gi|11499617|ref|NP_070859.1| seryl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
gi|3334361|sp|O28244.1|SYS_ARCFU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2648500|gb|AAB89219.1| seryl-tRNA synthetase (serS) [Archaeoglobus fulgidus DSM 4304]
Length = 453
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 136/204 (66%), Gaps = 11/204 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE PI A+H L E LP+ Y GVS CFR+E G+HG+DT+GIFRVH
Sbjct: 238 KVEDEDLYLIATSEHPIAAMHMREVLEERELPLLYAGVSPCFRKEAGAHGKDTKGIFRVH 297
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P ++SW+ +++I+N E+ + LGI YR+VNI +G L AAKK DL
Sbjct: 298 QFNKVEQFVFCLP--EQSWEWHEKLIENVEKLWQGLGIPYRIVNICTGDLGIVAAKKYDL 355
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICAI 186
EAW P +RE+VSCSNC D+QS RL +R+ + + K + +TA ATTR I AI
Sbjct: 356 EAWMPAQAKYREMVSCSNCTDWQSYRLDIRFAEERGKPSKGFVHTLNSTAIATTRAITAI 415
Query: 187 LETHQTETG-VRIPDCLRKFVPAV 209
+E Q E G V IP LRK++ +
Sbjct: 416 IENFQLEDGRVEIPRVLRKYLEPI 439
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 104/154 (67%), Gaps = 4/154 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF KVEQFV P ++SW+ +++I+N E+ + LGI YR+VNI +G L
Sbjct: 289 DTKGIFRVHQFNKVEQFVFCLP--EQSWEWHEKLIENVEKLWQGLGIPYRIVNICTGDLG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLEAW P +RE+VSCSNC +QS RL +R+ + + K FVH LN+TA
Sbjct: 347 IVAAKKYDLEAWMPAQAKYREMVSCSNCTDWQSYRLDIRFAEERGKPSK-GFVHTLNSTA 405
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AI+E Q E G V IP LRK++ +
Sbjct: 406 IATTRAITAIIENFQLEDGRVEIPRVLRKYLEPI 439
Score = 53.1 bits (126), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 31/48 (64%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLIATSE PI A+H L E LP+ Y GVS CFR+E A
Sbjct: 238 KVEDEDLYLIATSEHPIAAMHMREVLEERELPLLYAGVSPCFRKEAGA 285
>gi|48478304|ref|YP_024010.1| seryl-tRNA synthetase [Picrophilus torridus DSM 9790]
gi|67461767|sp|Q6KZN5.1|SYS_PICTO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|48430952|gb|AAT43817.1| seryl-tRNA synthetase [Picrophilus torridus DSM 9790]
Length = 444
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 135/208 (64%), Gaps = 12/208 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIAT+E PI ++ +D L E LPIR GVS CFR+E G+HG+DT+GIFRVH
Sbjct: 238 KIEGDDLYLIATAEHPIASMLQDEILMEDELPIRVSGVSPCFRREAGAHGKDTKGIFRVH 297
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQFV P D SW DE+++NSE+ Y L I YRVVN+ SG L + AAKK D+
Sbjct: 298 QFNKIEQFVFCKPED--SWDFFDELVRNSEDIYKSLKIPYRVVNVCSGELGNLAAKKYDI 355
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILET 189
EAWFP G FRE+VS SN DYQ+R L ++Y + + +TA AT R++ AI+E
Sbjct: 356 EAWFPAQGKFREIVSASNDTDYQARSLNIKYRSRDGNRFVHTLNSTAIATERILVAIMEN 415
Query: 190 HQTETG--VRIPDCLRKFVPAVYLNEAG 215
Q G ++IP+ L +P +E G
Sbjct: 416 FQDRNGKVIKIPEVL---IPYTGFSEIG 440
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 105/161 (65%), Gaps = 11/161 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF K+EQFV P D SW DE+++NSE+ Y L I YRVVN+ SG L
Sbjct: 289 DTKGIFRVHQFNKIEQFVFCKPED--SWDFFDELVRNSEDIYKSLKIPYRVVNVCSGELG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+ AAKK D+EAWFP G FRE+VS SN YQ+R L ++Y +++ N FVH LN+TA
Sbjct: 347 NLAAKKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKY-RSRDGN---RFVHTLNSTA 402
Query: 423 CATTRVICAILETHQTETG--VRIPDCLRKFVPAVYVNEAG 461
AT R++ AI+E Q G ++IP+ L +P +E G
Sbjct: 403 IATERILVAIMENFQDRNGKVIKIPEVL---IPYTGFSEIG 440
Score = 53.1 bits (126), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E DD YLIAT+E PI ++ +D L E LPIR GVS CFR+E A
Sbjct: 238 KIEGDDLYLIATAEHPIASMLQDEILMEDELPIRVSGVSPCFRREAGA 285
>gi|124511894|ref|XP_001349080.1| seryl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
gi|23498848|emb|CAD50925.1| seryl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
Length = 539
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 143/248 (57%), Gaps = 44/248 (17%)
Query: 11 SAPEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTR 68
+ P ++L DD +LIATSEQP+CA+H+D + LP++Y G S+CFR+E G+HG+D R
Sbjct: 299 NIPSNEDLTRDDLFLIATSEQPLCALHKDETIESKRLPLKYAGFSSCFRKEAGAHGKDIR 358
Query: 69 GIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 128
GI RVHQF+KVEQF + P S K+ +EMIQ EEFY L I YR+V+IVSGALN+AA
Sbjct: 359 GILRVHQFDKVEQFCIALPQ--HSNKIHEEMIQTCEEFYQSLNIPYRIVSIVSGALNNAA 416
Query: 129 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI---------------- 172
+ K DLE +FP S +RELVSCSNC DYQS L +RY + KI
Sbjct: 417 SIKYDLEGFFPTSNQYRELVSCSNCTDYQSINLNIRYSDSSIKINDLNKNTNLNDEMDSE 476
Query: 173 -------------------YATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNE 213
T A R +C +LE +Q G+ +P+ LR Y+N
Sbjct: 477 YEHFLTNFNTENKYHVHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLRP-----YMNN 531
Query: 214 AGEIPFVK 221
IPF++
Sbjct: 532 MDFIPFME 539
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 108/191 (56%), Gaps = 33/191 (17%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI RVHQF+KVEQF + P S K +EMIQ EEFY L I YR+V+IVSGALN
Sbjct: 356 DIRGILRVHQFDKVEQFCIALPQ--HSNKIHEEMIQTCEEFYQSLNIPYRIVSIVSGALN 413
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY----------GQTKKMNEKI 412
+AA+ K DLE +FP S +RELVSCSNC YQS L +RY + +N+++
Sbjct: 414 NAASIKYDLEGFFPTSNQYRELVSCSNCTDYQSINLNIRYSDSSIKINDLNKNTNLNDEM 473
Query: 413 E----------------FVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVY 456
+ VH+LN T A R +C +LE +Q G+ +P+ LR Y
Sbjct: 474 DSEYEHFLTNFNTENKYHVHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLRP-----Y 528
Query: 457 VNEAGEIPFVK 467
+N IPF++
Sbjct: 529 MNNMDFIPFME 539
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 527 SAPEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+ P ++L DD +LIATSEQP+CA+H+D + LP++Y G S+CFR+E A
Sbjct: 299 NIPSNEDLTRDDLFLIATSEQPLCALHKDETIESKRLPLKYAGFSSCFRKEAGA 352
>gi|432328603|ref|YP_007246747.1| seryl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
gi|432135312|gb|AGB04581.1| seryl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
Length = 439
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 134/198 (67%), Gaps = 7/198 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D Y+IAT+E P+ A+H L E LPI+Y+G+S CFR+E G+HG+DT+GIFRVH F K
Sbjct: 242 EDLYMIATAEHPLVAMHMKEILEEKDLPIKYVGISPCFRKEAGAHGKDTKGIFRVHNFYK 301
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQ + + P +ES +++E++ N+EE L + YRV+NI SG L AAKK D+E W
Sbjct: 302 VEQVIFSKP--EESPSLMEELVGNAEEIIQKLELPYRVINICSGELGAVAAKKYDIEVWM 359
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY---GQTK--QKIYATACATTRVICAILETHQTE 193
P FRE+VSCSNCL+YQSRRL +RY G+ K + +TA ATTR++ AI+E Q +
Sbjct: 360 PAQQKFREVVSCSNCLEYQSRRLKIRYRHKGEMKFVHTLNSTALATTRIMVAIIENFQED 419
Query: 194 TGVRIPDCLRKFVPAVYL 211
G+RIP L + Y+
Sbjct: 420 KGIRIPKALVPYTGFEYI 437
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 6/155 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVH F KVEQ + + P +ES ++E++ N+EE L + YRV+NI SG L
Sbjct: 289 DTKGIFRVHNFYKVEQVIFSKP--EESPSLMEELVGNAEEIIQKLELPYRVINICSGELG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W P FRE+VSCSNCL YQSRRL +RY +M +FVH LN+TA
Sbjct: 347 AVAAKKYDIEVWMPAQQKFREVVSCSNCLEYQSRRLKIRYRHKGEM----KFVHTLNSTA 402
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
ATTR++ AI+E Q + G+RIP L + Y+
Sbjct: 403 LATTRIMVAIIENFQEDKGIRIPKALVPYTGFEYI 437
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D Y+IAT+E P+ A+H L E LPI+Y+G+S CFR+E A
Sbjct: 242 EDLYMIATAEHPLVAMHMKEILEEKDLPIKYVGISPCFRKEAGA 285
>gi|288561203|ref|YP_003424689.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1]
gi|288543913|gb|ADC47797.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1]
Length = 425
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+EQ + A+HRD + LP+RY +STCFR+E GSHG+DT GIFRVH
Sbjct: 218 KVENEDLYLIATAEQTLAALHRDEIINPEDLPMRYCALSTCFRKEAGSHGKDTLGIFRVH 277
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQF+ ++P +ES +++ +E+ Y LG+ Y++V IVS ALN AA K DL
Sbjct: 278 QFEKIEQFIFSTP--EESKNEHHRLLEVTEDIYKKLGLPYQIVAIVSSALNDNAAIKYDL 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-------QTKQKIYATACATTRVICAIL 187
EAWFPGS +RELVSC+NC DYQ+R+ RYG QT + +TA AT R +C IL
Sbjct: 336 EAWFPGSKTYRELVSCTNCGDYQARKTKTRYGRAGSGDAQTLHTLNSTAIATERTMCCIL 395
Query: 188 ETHQTETG-VRIPDCLRKFVPAVYLNEA 214
E +Q + G V++P+ L ++ + EA
Sbjct: 396 ENYQQDDGSVKVPEVLVPYMGGKTVIEA 423
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 106/159 (66%), Gaps = 5/159 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF+ ++P +ES +++ +E+ Y LG+ Y++V IVS ALN
Sbjct: 269 DTLGIFRVHQFEKIEQFIFSTP--EESKNEHHRLLEVTEDIYKKLGLPYQIVAIVSSALN 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA K DLEAWFPGS +RELVSC+NC YQ+R+ RYG+ + + +H LN+TA
Sbjct: 327 DNAAIKYDLEAWFPGSKTYRELVSCTNCGDYQARKTKTRYGRAGSGDAQT--LHTLNSTA 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEA 460
AT R +C ILE +Q + G V++P+ L ++ V EA
Sbjct: 385 IATERTMCCILENYQQDDGSVKVPEVLVPYMGGKTVIEA 423
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLIAT+EQ + A+HRD + LP+RY +STCFR+E
Sbjct: 218 KVENEDLYLIATAEQTLAALHRDEIINPEDLPMRYCALSTCFRKEA 263
>gi|70607320|ref|YP_256190.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
gi|449067563|ref|YP_007434645.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius N8]
gi|449069837|ref|YP_007436918.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius Ron12/I]
gi|76363444|sp|Q4J8I4.1|SYS_SULAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|68567968|gb|AAY80897.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
gi|449036071|gb|AGE71497.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius N8]
gi|449038345|gb|AGE73770.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius Ron12/I]
Length = 458
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 133/199 (66%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A++ +P+ LP++ +GVS FR+E G+ +D +GIFRVH
Sbjct: 241 KIEGEDLYLIATAEHSIAALYYKEEIPKEELPLKLVGVSPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ +SP D SWK +EMI+N+EE + LG+ YRV+NI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSSPED--SWKYHEEMIENAEEIFRGLGLPYRVINIASGDLGAPAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P FRE+VSCSNCLD+Q+ R+ +RY + K + +TA A+TR I AILE
Sbjct: 359 EVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEKNNKKGYLHTLNSTAIASTRAITAILE 418
Query: 189 THQTETG-VRIPDCLRKFV 206
Q E G V +P LRK++
Sbjct: 419 NFQKEDGVVEVPKVLRKYL 437
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 106/154 (68%), Gaps = 6/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ +SP D SWK +EMI+N+EE + LG+ YRV+NI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSSPED--SWKYHEEMIENAEEIFRGLGLPYRVINIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNCL +Q+ R+ +RY + N K ++H LN
Sbjct: 347 DLGAPAAKKYDLEVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEK---NNKKGYLHTLN 403
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE Q E G V +P LRK++
Sbjct: 404 STAIASTRAITAILENFQKEDGVVEVPKVLRKYL 437
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E I A++ +P+ LP++ +GVS FR+E A G+ R +
Sbjct: 241 KIEGEDLYLIATAEHSIAALYYKEEIPKEELPLKLVGVSPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>gi|14590588|ref|NP_142656.1| seryl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|3257118|dbj|BAA29801.1| 460aa long hypothetical seryl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 460
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 139/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 246 KVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 305
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++I+N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 306 QFHKVEQFVYSRP--EESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 363
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 364 EAWMPGQGKFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAIL 423
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQ E G VRIP L K+
Sbjct: 424 ENHQEEDGTVRIPKVLWKY 442
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++I+N+EE + +L I YRVVNI +G
Sbjct: 294 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKIIRNAEELFQELEIPYRVVNICTG 351
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + +EK +VH LN
Sbjct: 352 DLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLN 409
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQ E G VRIP L K+
Sbjct: 410 STAIATSRAIVAILENHQEEDGTVRIPKVLWKY 442
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 246 KVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 291
>gi|359415872|ref|ZP_09208259.1| Seryl-tRNA synthetase [Candidatus Haloredivivus sp. G17]
gi|358033772|gb|EHK02290.1| Seryl-tRNA synthetase [Candidatus Haloredivivus sp. G17]
Length = 330
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 135/197 (68%), Gaps = 7/197 (3%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +DKYLIATSEQ + +H+D L E P +Y G ST FRQE G HG+ TRGI+RVH
Sbjct: 127 KIEDEDKYLIATSEQTLATLHKDDLLLEEEFPKKYAGFSTNFRQEAGKHGQQTRGIWRVH 186
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVEQ++ P + SW + + +++N+EE LG+ YRVVN+ +G +N AAKK D+
Sbjct: 187 QFEKVEQYIFCKPEN--SWDLHEVLLENAEEVTKRLGLPYRVVNVCTGDMNDNAAKKYDI 244
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILET 189
E W P G + E+VSCSNC DYQ+R++ VR + + ATACAT+R++ AI+E
Sbjct: 245 EVWRPPLGEYGEIVSCSNCTDYQARKVNVRIRKGDENEVAHTLNATACATSRIMTAIIEN 304
Query: 190 HQTETGVRIPDCLRKFV 206
+QTE G++IP+ L+ ++
Sbjct: 305 NQTEEGIQIPEALQSYM 321
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 105/149 (70%), Gaps = 6/149 (4%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
TRGI+RVHQFEKVEQ++ P + SW + +++N+EE LG+ YRVVN+ +G +N
Sbjct: 179 TRGIWRVHQFEKVEQYIFCKPEN--SWDLHEVLLENAEEVTKRLGLPYRVVNVCTGDMND 236
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 423
AAKK D+E W P G + E+VSCSNC YQ+R++ VR +K +E E H LNATAC
Sbjct: 237 NAAKKYDIEVWRPPLGEYGEIVSCSNCTDYQARKVNVR---IRKGDEN-EVAHTLNATAC 292
Query: 424 ATTRVICAILETHQTETGVRIPDCLRKFV 452
AT+R++ AI+E +QTE G++IP+ L+ ++
Sbjct: 293 ATSRIMTAIIENNQTEEGIQIPEALQSYM 321
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 66/150 (44%), Gaps = 40/150 (26%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCA 590
K E +DKYLIATSEQ + +H+D L E P +Y G ST FRQE AG
Sbjct: 127 KIEDEDKYLIATSEQTLATLHKDDLLLEEEFPKKYAGFSTNFRQE--AGK-------HGQ 177
Query: 591 QREGLLSEATSEEVDQADPFYAHCR------LHADKLEDFSKFSKIL-----VCCVCLGE 639
Q G+ E+V+Q Y C+ LH LE+ + +K L V VC G+
Sbjct: 178 QTRGIWRVHQFEKVEQ----YIFCKPENSWDLHEVLLENAEEVTKRLGLPYRVVNVCTGD 233
Query: 640 RSDDV----------------NEIVECDSC 653
+D+ EIV C +C
Sbjct: 234 MNDNAAKKYDIEVWRPPLGEYGEIVSCSNC 263
>gi|315230878|ref|YP_004071314.1| seryl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183906|gb|ADT84091.1| seryl-tRNA synthetase [Thermococcus barophilus MP]
Length = 455
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 139/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + + LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEIIDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ ++++QN+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKLLQNAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VSCSNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGKFREVVSCSNCTDWQARRLNIRFRDKTHEKPKFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E Q E G VRIP L K+
Sbjct: 419 ENFQEEDGTVRIPKALWKY 437
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 111/153 (72%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ ++++QN+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKLLQNAEELFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VSCSNC +Q+RRL +R+ K +EK +FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGKFREVVSCSNCTDWQARRLNIRF--RDKTHEKPKFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE Q E G VRIP L K+
Sbjct: 405 STAIATSRAIVAILENFQEEDGTVRIPKALWKY 437
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + + LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEIIDGKDLPLLYVGVSPCFRKEA 286
>gi|401826008|ref|XP_003887098.1| seryl-tRNA synthetase [Encephalitozoon hellem ATCC 50504]
gi|392998256|gb|AFM98117.1| seryl-tRNA synthetase [Encephalitozoon hellem ATCC 50504]
Length = 429
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 134/201 (66%), Gaps = 10/201 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLIATSEQ + A++ D + +P ++ G S CFR+E G+HG+D G+FRVHQFEK
Sbjct: 227 DDLYLIATSEQALAALYMDERMTPQEVPKKFCGQSLCFRKEAGAHGKDNAGLFRVHQFEK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ P ES + +EMI+ EEFY L I+Y VV+IVSG LN AAA K DLEA+F
Sbjct: 287 IEQFVICEP--SESQRHHEEMIRICEEFYQSLDISYNVVSIVSGELNDAAAIKYDLEAYF 344
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---KIY-----ATACATTRVICAILETH 190
P + +RELVSCSNC DYQSR L +RYG K+ K+Y T CA R +C I+E +
Sbjct: 345 PNAEKYRELVSCSNCTDYQSRELEIRYGIVKENNRKVYVHLLNGTMCAIQRALCCIVENY 404
Query: 191 QTETGVRIPDCLRKFVPAVYL 211
Q E G+ +PD L+ + ++
Sbjct: 405 QRENGIDVPDVLQGYFGGDFI 425
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 107/155 (69%), Gaps = 3/155 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEK+EQFV+ P ES + +EMI+ EEFY L I+Y VV+IVSG LN
Sbjct: 274 DNAGLFRVHQFEKIEQFVICEP--SESQRHHEEMIRICEEFYQSLDISYNVVSIVSGELN 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLEA+FP + +RELVSCSNC YQSR L +RYG K+ N K+ +VH+LN T
Sbjct: 332 DAAAIKYDLEAYFPNAEKYRELVSCSNCTDYQSRELEIRYGIVKENNRKV-YVHLLNGTM 390
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
CA R +C I+E +Q E G+ +PD L+ + ++
Sbjct: 391 CAIQRALCCIVENYQRENGIDVPDVLQGYFGGDFI 425
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 515 REVIGKGEKVGDSAPEKDEL-DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
R+V+ K ++ D + ++ DD YLIATSEQ + A++ D + +P ++ G S CFR
Sbjct: 206 RDVMAKTSQLSDFDEQLYKVEDDLYLIATSEQALAALYMDERMTPQEVPKKFCGQSLCFR 265
Query: 574 QEC------DAGMCRTY 584
+E +AG+ R +
Sbjct: 266 KEAGAHGKDNAGLFRVH 282
>gi|8039794|sp|O58441.2|SYS_PYRHO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|149241121|pdb|2DQ0|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With A Seryl-Adenylate Analog
gi|149241122|pdb|2DQ0|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With A Seryl-Adenylate Analog
gi|198443182|pdb|2ZR2|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With Atp
gi|198443183|pdb|2ZR2|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With Atp
gi|198443184|pdb|2ZR3|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii
gi|198443185|pdb|2ZR3|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii
Length = 455
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 139/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++I+N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGKFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQ E G VRIP L K+
Sbjct: 419 ENHQEEDGTVRIPKVLWKY 437
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++I+N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKIIRNAEELFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + +EK +VH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQ E G VRIP L K+
Sbjct: 405 STAIATSRAIVAILENHQEEDGTVRIPKVLWKY 437
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 241 KVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 286
>gi|429964021|gb|ELA46019.1| serine-tRNA ligase [Vavraia culicis 'floridensis']
Length = 465
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 135/195 (69%), Gaps = 10/195 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YLIATSEQP+ ++ + L LP + G S CFR+E G+ G+D +GIFRVHQFEK
Sbjct: 263 DDQYLIATSEQPLTGLYMNERLLPEQLPKKLCGQSLCFRKEAGAAGKDNKGIFRVHQFEK 322
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV+ +P ES ++ M+ SE+FY LG+ YRVV+IVSG +N +A K DLEA+F
Sbjct: 323 VEQFVVCAP--GESEEVHQSMLAISEQFYQSLGLDYRVVSIVSGEMNDSACLKYDLEAYF 380
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---KIY-----ATACATTRVICAILETH 190
P S +RELVSCSNC DYQ+R L VRYG TK+ K+Y AT CA R +C ++E +
Sbjct: 381 PHSKRYRELVSCSNCTDYQARDLEVRYGITKENDKKLYCHMLNATLCAVQRTLCCLVENY 440
Query: 191 QTETGVRIPDCLRKF 205
Q E G+++PD L K+
Sbjct: 441 QDEEGIKVPDVLVKY 455
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/152 (54%), Positives = 109/152 (71%), Gaps = 3/152 (1%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D +GIFRVHQFEKVEQFV+ +P ES + M+ SE+FY LG+ YRVV+IVSG
Sbjct: 307 AGKDNKGIFRVHQFEKVEQFVVCAP--GESEEVHQSMLAISEQFYQSLGLDYRVVSIVSG 364
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+N +A K DLEA+FP S +RELVSCSNC YQ+R L VRYG TK+ ++K+ + HMLN
Sbjct: 365 EMNDSACLKYDLEAYFPHSKRYRELVSCSNCTDYQARDLEVRYGITKENDKKL-YCHMLN 423
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKF 451
AT CA R +C ++E +Q E G+++PD L K+
Sbjct: 424 ATLCAVQRTLCCLVENYQDEEGIKVPDVLVKY 455
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 515 REVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 574
++V+ K ++ + + DD+YLIATSEQP+ ++ + L LP + G S CFR+
Sbjct: 243 KDVMSKTAQLSEFDEQLYSADDQYLIATSEQPLTGLYMNERLLPEQLPKKLCGQSLCFRK 302
Query: 575 ECDAG 579
E A
Sbjct: 303 EAGAA 307
>gi|303388974|ref|XP_003072720.1| seryl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
gi|303301862|gb|ADM11360.1| seryl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
Length = 429
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 132/195 (67%), Gaps = 10/195 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ATSEQ + A++ D + P ++ G S CFR+E G+HG+D G+FRVHQFEK
Sbjct: 227 DDLYLVATSEQSLAALYMDERIVPQETPKKFCGQSLCFRKEAGAHGKDNAGLFRVHQFEK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +ES + +EMI+ EEFY L I+Y VV+IVSG LN AA K DLEA+F
Sbjct: 287 IEQFVICSP--EESERHHEEMIKICEEFYQSLDISYNVVSIVSGELNDAAVMKYDLEAYF 344
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---KIY-----ATACATTRVICAILETH 190
P + +RELVSCSNC DYQSR L +RYG K+ K+Y T CA R +C I+E +
Sbjct: 345 PNAEKYRELVSCSNCTDYQSRELEIRYGIAKENNRKVYVHLLNGTMCAIQRTLCCIVENY 404
Query: 191 QTETGVRIPDCLRKF 205
Q E G+ IPD L+ +
Sbjct: 405 QNERGISIPDVLQGY 419
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 106/149 (71%), Gaps = 3/149 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEK+EQFV+ SP +ES + +EMI+ EEFY L I+Y VV+IVSG LN
Sbjct: 274 DNAGLFRVHQFEKIEQFVICSP--EESERHHEEMIKICEEFYQSLDISYNVVSIVSGELN 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA K DLEA+FP + +RELVSCSNC YQSR L +RYG K+ N K+ +VH+LN T
Sbjct: 332 DAAVMKYDLEAYFPNAEKYRELVSCSNCTDYQSRELEIRYGIAKENNRKV-YVHLLNGTM 390
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKF 451
CA R +C I+E +Q E G+ IPD L+ +
Sbjct: 391 CAIQRTLCCIVENYQNERGISIPDVLQGY 419
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 515 REVIGKGEKVGDSAPEKDEL-DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
R+V+GK ++ D + ++ DD YL+ATSEQ + A++ D + P ++ G S CFR
Sbjct: 206 RDVMGKTSQLSDFDDQLYKVEDDLYLVATSEQSLAALYMDERIVPQETPKKFCGQSLCFR 265
Query: 574 QECDA 578
+E A
Sbjct: 266 KEAGA 270
>gi|257076767|ref|ZP_05571128.1| seryl-tRNA synthetase [Ferroplasma acidarmanus fer1]
Length = 443
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 129/193 (66%), Gaps = 7/193 (3%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIAT+E P+ ++ L E+ LP+R GVS CFR+E G+HGRDT+GIFRVH
Sbjct: 239 KIEGDDLYLIATAEHPLASMLSGEILEESELPLRVSGVSPCFRREAGAHGRDTKGIFRVH 298
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQF+ P +ESW DE+++NSE+ Y LG+ YR+VNI SG L AAKK D+
Sbjct: 299 QFNKIEQFIYCRP--EESWDFFDELVKNSEDIYKSLGLPYRIVNICSGDLGSLAAKKYDI 356
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILET 189
E W+P G FRE+VS SN DYQ+R L +RY + + +TA AT RV+ AI+E
Sbjct: 357 EVWYPSQGKFREVVSASNDTDYQARSLNIRYRAKDGNKFAHTLNSTAIATERVLVAIMEN 416
Query: 190 HQTETGVRIPDCL 202
Q + +++PD L
Sbjct: 417 FQEDDYIKVPDVL 429
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 99/146 (67%), Gaps = 6/146 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF K+EQF+ P +ESW DE+++NSE+ Y LG+ YR+VNI SG L
Sbjct: 290 DTKGIFRVHQFNKIEQFIYCRP--EESWDFFDELVKNSEDIYKSLGLPYRIVNICSGDLG 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W+P G FRE+VS SN YQ+R L +RY + K N +F H LN+TA
Sbjct: 348 SLAAKKYDIEVWYPSQGKFREVVSASNDTDYQARSLNIRY-RAKDGN---KFAHTLNSTA 403
Query: 423 CATTRVICAILETHQTETGVRIPDCL 448
AT RV+ AI+E Q + +++PD L
Sbjct: 404 IATERVLVAIMENFQEDDYIKVPDVL 429
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E DD YLIAT+E P+ ++ L E+ LP+R GVS CFR+E A
Sbjct: 239 KIEGDDLYLIATAEHPLASMLSGEILEESELPLRVSGVSPCFRREAGA 286
>gi|429963273|gb|ELA42817.1| serine-tRNA ligase, partial [Vittaforma corneae ATCC 50505]
Length = 397
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 134/196 (68%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIATSEQP+ A+ + L E+ LP + G S CFR+E G++G+D GIFRVHQFEK
Sbjct: 197 EDLYLIATSEQPLTALFINKKLTESDLPKMFAGDSLCFRKEAGAYGKDNAGIFRVHQFEK 256
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ SP +ES ++ + +++ EEFY LG++Y++V I SG +N AAAKK DLEAWF
Sbjct: 257 IEQFVICSP--EESKQIHENLVKQCEEFYQSLGLSYQIVLISSGEMNDAAAKKYDLEAWF 314
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICAILETH 190
P S FRELVS SNC DYQSR L V YG TK+ + AT CA R +C I+E +
Sbjct: 315 PNSQKFRELVSASNCTDYQSRNLNVGYGFTKENERQSYVHMLNATLCAIQRSLCCIVENY 374
Query: 191 QTETGVRIPDCLRKFV 206
Q E + +P+ L+K+
Sbjct: 375 QEEDRISVPEVLKKYT 390
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 107/150 (71%), Gaps = 3/150 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV+ SP +ES + + +++ EEFY LG++Y++V I SG +N
Sbjct: 244 DNAGIFRVHQFEKIEQFVICSP--EESKQIHENLVKQCEEFYQSLGLSYQIVLISSGEMN 301
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S FRELVS SNC YQSR L V YG TK+ NE+ +VHMLNAT
Sbjct: 302 DAAAKKYDLEAWFPNSQKFRELVSASNCTDYQSRNLNVGYGFTKE-NERQSYVHMLNATL 360
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452
CA R +C I+E +Q E + +P+ L+K+
Sbjct: 361 CAIQRSLCCIVENYQEEDRISVPEVLKKYT 390
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D YLIATSEQP+ A+ + L E+ LP + G S CFR+E A
Sbjct: 197 EDLYLIATSEQPLTALFINKKLTESDLPKMFAGDSLCFRKEAGA 240
>gi|162606512|ref|XP_001713286.1| seryl-tRNA synthetase (serin-tRNA ligase) [Guillardia theta]
gi|12580752|emb|CAC27070.1| seryl-tRNA synthetase (serin-tRNA ligase) [Guillardia theta]
Length = 425
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 130/201 (64%), Gaps = 8/201 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D K+LIATSEQ ICA H + LP++Y+G+STCFR+E GSHG+DT GIFRVHQFEK
Sbjct: 223 DKKFLIATSEQTICAFHFKEKIHAEYLPLKYVGISTCFRKESGSHGKDTNGIFRVHQFEK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF++ + ESWK + +I NS+EFY L I + +NI + LN A++K DL WF
Sbjct: 283 IEQFIICNSDKYESWKFFEILISNSKEFYKSLQIPFICINIPTIDLNKTASRKTDLLGWF 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLV---RYGQTKQKIY-----ATACATTRVICAILETH 190
P ++ELVSCSNCL+YQS L + + G QK Y +T CATTR IC I E +
Sbjct: 343 PSGSNYKELVSCSNCLEYQSENLYIETYKNGILPQKSYLHMLNSTLCATTRTICCIAENY 402
Query: 191 QTETGVRIPDCLRKFVPAVYL 211
G+ IP+ LR ++ ++
Sbjct: 403 SENNGLTIPNALRDYLGFSFI 423
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF++ + ESWK + +I NS+EFY L I + +NI + LN
Sbjct: 270 DTNGIFRVHQFEKIEQFIICNSDKYESWKFFEILISNSKEFYKSLQIPFICINIPTIDLN 329
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A++K DL WFP ++ELVSCSNCL YQS L + + + +K ++HMLN+T
Sbjct: 330 KTASRKTDLLGWFPSGSNYKELVSCSNCLEYQSENLYIETYKNGILPQK-SYLHMLNSTL 388
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
CATTR IC I E + G+ IP+ LR ++ ++
Sbjct: 389 CATTRTICCIAENYSENNGLTIPNALRDYLGFSFI 423
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
D K+LIATSEQ ICA H + LP++Y+G+STCFR+E
Sbjct: 223 DKKFLIATSEQTICAFHFKEKIHAEYLPLKYVGISTCFRKE 263
>gi|393796812|ref|ZP_10380176.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 420
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 134/200 (67%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D Y+I TSE + A+H D + LP+RY GVS CFR+E G+HGRD +GIFRVH
Sbjct: 218 KIENEDLYMIGTSEHAMAAMHSDEIIEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVH 277
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+K+EQFV T P DESW ++M+ N+EEFY L I Y+V+ + SG + +AK D+
Sbjct: 278 QFDKIEQFVFTRP--DESWDEHEKMLSNAEEFYQKLEIPYKVLLLSSGDMGKVSAKTYDI 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAIL 187
EAW G A+RE+VSCSNCLDYQ+RRL +R+ Q + +T AT+RV+ +I+
Sbjct: 336 EAWMAGQNAYREIVSCSNCLDYQARRLKIRFRDKTNEDTQYLHTLNSTLIATSRVLVSIM 395
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E QT+ G + IP L+K++
Sbjct: 396 ENFQTKDGHITIPKVLQKYM 415
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 106/151 (70%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF+K+EQFV T P DESW ++M+ N+EEFY L I Y+V+ + SG +
Sbjct: 269 DQKGIFRVHQFDKIEQFVFTRP--DESWDEHEKMLSNAEEFYQKLEIPYKVLLLSSGDMG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+EAW G A+RE+VSCSNCL YQ+RRL +R+ K NE +++H LN+T
Sbjct: 327 KVSAKTYDIEAWMAGQNAYREIVSCSNCLDYQARRLKIRF--RDKTNEDTQYLHTLNSTL 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT+RV+ +I+E QT+ G + IP L+K++
Sbjct: 385 IATSRVLVSIMENFQTKDGHITIPKVLQKYM 415
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D Y+I TSE + A+H D + LP+RY GVS CFR+E A
Sbjct: 218 KIENEDLYMIGTSEHAMAAMHSDEIIEGKDLPLRYAGVSPCFRKEAGA 265
>gi|329766549|ref|ZP_08258092.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329136804|gb|EGG41097.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 420
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 134/200 (67%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D Y+I TSE + A+H D + LP+RY GVS CFR+E G+HGRD +GIFRVH
Sbjct: 218 KIENEDLYMIGTSEHAMAAMHSDEIIEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVH 277
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+K+EQFV T P DESW ++M+ N+EEFY L I Y+V+ + SG + +AK D+
Sbjct: 278 QFDKIEQFVFTRP--DESWDEHEKMLSNAEEFYQKLEIPYKVLLLSSGDMGKVSAKTYDI 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAIL 187
EAW G A+RE+VSCSNCLDYQ+RRL +R+ Q + +T AT+RV+ +I+
Sbjct: 336 EAWMAGQNAYREIVSCSNCLDYQARRLKIRFRDKTNEDTQYLHTLNSTLIATSRVLVSIM 395
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E QT+ G + IP L+K++
Sbjct: 396 ENFQTKDGHITIPKVLQKYM 415
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 106/151 (70%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF+K+EQFV T P DESW ++M+ N+EEFY L I Y+V+ + SG +
Sbjct: 269 DQKGIFRVHQFDKIEQFVFTRP--DESWDEHEKMLSNAEEFYQKLEIPYKVLLLSSGDMG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+EAW G A+RE+VSCSNCL YQ+RRL +R+ K NE +++H LN+T
Sbjct: 327 KVSAKTYDIEAWMAGQNAYREIVSCSNCLDYQARRLKIRF--RDKTNEDTQYLHTLNSTL 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT+RV+ +I+E QT+ G + IP L+K++
Sbjct: 385 IATSRVLVSIMENFQTKDGHITIPKVLQKYM 415
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D Y+I TSE + A+H D + LP+RY GVS CFR+E A
Sbjct: 218 KIENEDLYMIGTSEHAMAAMHSDEIIEGKDLPLRYAGVSPCFRKEAGA 265
>gi|337284432|ref|YP_004623906.1| seryl-tRNA synthetase [Pyrococcus yayanosii CH1]
gi|334900366|gb|AEH24634.1| seryl-tRNA synthetase [Pyrococcus yayanosii CH1]
Length = 456
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 145/225 (64%), Gaps = 21/225 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++I N+EE + L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKLIANAEELFQALEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGKFREVVSASNCTDWQARRLNIRFRDRTNEKPRYVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
E HQ E G VRIP L K+ F + P+D +E +
Sbjct: 419 ENHQEEDGTVRIPKVLWKYT-----------GFKEIVPVDRKEGR 452
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 116/179 (64%), Gaps = 16/179 (8%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++I N+EE + L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKLIANAEELFQALEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + NEK +VH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRF--RDRTNEKPRYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETK 477
+TA AT+R I AILE HQ E G VRIP L K+ F + P+D +E +
Sbjct: 405 STAIATSRAIVAILENHQEEDGTVRIPKVLWKYT-----------GFKEIVPVDRKEGR 452
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 286
>gi|70941484|ref|XP_741024.1| seryl-tRNA synthetase [Plasmodium chabaudi chabaudi]
gi|56519139|emb|CAH78580.1| seryl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi]
Length = 519
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 118/154 (76%), Gaps = 2/154 (1%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +LIATSEQP+CA+HRD L LP++Y+G+S+CFR+E G+HG+D RGI RVHQF+K
Sbjct: 295 DDLFLIATSEQPLCALHRDETLESRYLPLKYVGISSCFRKEAGAHGKDIRGILRVHQFDK 354
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF ++ P S+K+ +EMI+ EEFY L I Y++VNIVSGALN+AAA K D+E +F
Sbjct: 355 VEQFCISLPQ--TSYKLHEEMIKTCEEFYQSLNIPYKIVNIVSGALNNAAALKYDIEGYF 412
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI 172
P SG +RELVSCSNC DYQS L +RY + KI
Sbjct: 413 PSSGQYRELVSCSNCTDYQSINLNIRYTDSNIKI 446
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 100/180 (55%), Gaps = 39/180 (21%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI RVHQF+KVEQF ++ P S+K +EMI+ EEFY L I Y++VNIVSGALN
Sbjct: 342 DIRGILRVHQFDKVEQFCISLPQ--TSYKLHEEMIKTCEEFYQSLNIPYKIVNIVSGALN 399
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY--------GQTK-------- 406
+AAA K D+E +FP SG +RELVSCSNC YQS L +RY G TK
Sbjct: 400 NAAALKYDIEGYFPSSGQYRELVSCSNCTDYQSINLNIRYTDSNIKIAGITKSSKDKNDE 459
Query: 407 ----------------KMN-----EKIEFVHMLNATACATTRVICAILETHQTETGVRIP 445
K N E +VH+LN T A R +C +LE +Q G+ +P
Sbjct: 460 NTKDETKDEYVDSEYEKFNHDFPVENKNYVHLLNGTMVAGQRFLCCLLENYQNGEGIMVP 519
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DD +LIATSEQP+CA+HRD L LP++Y+G+S+CFR+E A
Sbjct: 295 DDLFLIATSEQPLCALHRDETLESRYLPLKYVGISSCFRKEAGA 338
>gi|440493531|gb|ELQ75988.1| Seryl-tRNA synthetase [Trachipleistophora hominis]
Length = 474
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 136/195 (69%), Gaps = 10/195 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D++YLIATSEQP+ A++ + + LP ++ G S CFR+E G+ G+D +GIFRVHQFEK
Sbjct: 273 DEQYLIATSEQPLTALYMNERILPEQLPKKFCGQSLCFRREAGAAGKDNKGIFRVHQFEK 332
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ +P ++S +M M+ SE+FY L + YRVV+IVSG +N +A K DLEA+F
Sbjct: 333 IEQFVICAP--EKSEEMHKAMLAVSEQFYQSLRLDYRVVSIVSGEMNDSACLKYDLEAYF 390
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---KIY-----ATACATTRVICAILETH 190
P S +RELVSCSNC DYQ+R L VRYG TK+ K+Y T CA R +C ++E +
Sbjct: 391 PHSKRYRELVSCSNCTDYQARDLEVRYGITKENDRKVYCHMLNGTLCAVQRTLCCLVENY 450
Query: 191 QTETGVRIPDCLRKF 205
Q E GVR+PD L K+
Sbjct: 451 QEEEGVRVPDVLVKY 465
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 104/152 (68%), Gaps = 3/152 (1%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D +GIFRVHQFEK+EQFV+ +P E M+ SE+FY L + YRVV+IVSG
Sbjct: 317 AGKDNKGIFRVHQFEKIEQFVICAPEKSEEMHKA--MLAVSEQFYQSLRLDYRVVSIVSG 374
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+N +A K DLEA+FP S +RELVSCSNC YQ+R L VRYG TK+ + K+ + HMLN
Sbjct: 375 EMNDSACLKYDLEAYFPHSKRYRELVSCSNCTDYQARDLEVRYGITKENDRKV-YCHMLN 433
Query: 420 ATACATTRVICAILETHQTETGVRIPDCLRKF 451
T CA R +C ++E +Q E GVR+PD L K+
Sbjct: 434 GTLCAVQRTLCCLVENYQEEEGVRVPDVLVKY 465
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 515 REVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQ 574
R+V+ K ++ + + D++YLIATSEQP+ A++ + + LP ++ G S CFR+
Sbjct: 253 RDVMAKTAQLSEFDEQLYAADEQYLIATSEQPLTALYMNERILPEQLPKKFCGQSLCFRR 312
Query: 575 ECDAG 579
E A
Sbjct: 313 EAGAA 317
>gi|346322972|gb|EGX92570.1| seryl-tRNA synthetase [Cordyceps militaris CM01]
Length = 493
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 146/236 (61%), Gaps = 37/236 (15%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE------------VGSH 63
DE +DKYLIATSEQPI A H D WL LPI+Y+ +ST V +
Sbjct: 252 DEANDKYLIATSEQPISAFHADEWLIAKDLPIKYIVISTMIISNDPVTVSLGMPAIVPAI 311
Query: 64 GR------DTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVV 117
G + RG+ + +VEQFVLT P ++SW+ +EMI SEEFY LG+ Y+V+
Sbjct: 312 GERLALMGEMRGLNKT----QVEQFVLTDP--EKSWEAFEEMIGVSEEFYQSLGLPYQVI 365
Query: 118 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQK- 171
IVSGALN+AAAKK DLEAWFP G ++ELVSCSNC DYQSR L +R+G TK+K
Sbjct: 366 AIVSGALNNAAAKKFDLEAWFPHQGEYKELVSCSNCTDYQSRALDIRFGAKTQTDTKKKY 425
Query: 172 ---IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
+ +T CATTR +C +LE +QTE G+R+P+ LRK++P IPF + P
Sbjct: 426 VHCLNSTLCATTRTLCCVLENYQTEDGIRVPEPLRKYLPGT----PEFIPFARELP 477
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 112/156 (71%), Gaps = 6/156 (3%)
Query: 315 KVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAW 374
+VEQFVLT P ++SW+ +EMI SEEFY LG+ Y+V+ IVSGALN+AAAKK DLEAW
Sbjct: 328 QVEQFVLTDP--EKSWEAFEEMIGVSEEFYQSLGLPYQVIAIVSGALNNAAAKKFDLEAW 385
Query: 375 FPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 434
FP G ++ELVSCSNC YQSR L +R+G + + K ++VH LN+T CATTR +C +LE
Sbjct: 386 FPHQGEYKELVSCSNCTDYQSRALDIRFGAKTQTDTKKKYVHCLNSTLCATTRTLCCVLE 445
Query: 435 THQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
+QTE G+R+P+ LRK++P IPF + P
Sbjct: 446 NYQTEDGIRVPEPLRKYLPGT----PEFIPFARELP 477
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVST 570
DE +DKYLIATSEQPI A H D WL LPI+Y+ +ST
Sbjct: 252 DEANDKYLIATSEQPISAFHADEWLIAKDLPIKYIVIST 290
>gi|212224239|ref|YP_002307475.1| seryl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229470724|sp|B6YWW5.1|SYS_THEON RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|212009196|gb|ACJ16578.1| Seryl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 457
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 139/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+G+S CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILEGKDLPLLYVGISPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++IQN+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKLIQNAEEIFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC ++Q+RRL +RY +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTEWQARRLNIRYRDKTHEKPKFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQTE G V++P L K+
Sbjct: 419 ENHQTEEGVVKLPKVLWKY 437
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 111/153 (72%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++IQN+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKLIQNAEEIFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +RY K +EK +FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRY--RDKTHEKPKFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENHQTEEGVVKLPKVLWKY 437
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+G+S CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILEGKDLPLLYVGISPCFRKEA 286
>gi|156937780|ref|YP_001435576.1| seryl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
gi|166222734|sp|A8AB67.1|SYS_IGNH4 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|156566764|gb|ABU82169.1| seryl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
Length = 458
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 132/200 (66%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE P+ A + + E+ LPI+ GVS CFR+E G+ RD +GIFRVH
Sbjct: 244 KIEGEDLYLIATSEHPLAAYKMEEIIDESELPIKLAGVSPCFRKEAGAGNRDLKGIFRVH 303
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P D SW++L+E+I+N+EE L + YRVVN+ G L AAKK DL
Sbjct: 304 QFHKVEQFVFSKPED--SWEVLEELIRNAEELVKGLELPYRVVNVCGGELGSPAAKKYDL 361
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY---GQTK----QKIYATACATTRVICAIL 187
E W+P G +RELVS SNC D+QS RL +RY G K + +TA ATTR I AIL
Sbjct: 362 EVWYPAQGKYRELVSASNCTDWQSYRLKIRYRIKGGKKHDFVHTLNSTALATTRTITAIL 421
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E HQ G VRIP LRK++
Sbjct: 422 ENHQLPDGRVRIPRALRKYL 441
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 127/217 (58%), Gaps = 29/217 (13%)
Query: 260 RGIFRVHQFE----KVE----QFVLTSPHDDESWKMLDEMIQNSE--------------- 296
RG+ V F+ K+E + TS H ++KM +E+I SE
Sbjct: 230 RGVIDVETFKDAIYKIEGEDLYLIATSEHPLAAYKM-EEIIDESELPIKLAGVSPCFRKE 288
Query: 297 EFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNI 356
+ D +GIFRVHQF KVEQFV + P D SW+ L+E+I+N+EE L + YRVVN+
Sbjct: 289 AGAGNRDLKGIFRVHQFHKVEQFVFSKPED--SWEVLEELIRNAEELVKGLELPYRVVNV 346
Query: 357 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVH 416
G L AAKK DLE W+P G +RELVS SNC +QS RL +RY K +K +FVH
Sbjct: 347 CGGELGSPAAKKYDLEVWYPAQGKYRELVSASNCTDWQSYRLKIRY--RIKGGKKHDFVH 404
Query: 417 MLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
LN+TA ATTR I AILE HQ G VRIP LRK++
Sbjct: 405 TLNSTALATTRTITAILENHQLPDGRVRIPRALRKYL 441
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIATSE P+ A + + E+ LPI+ GVS CFR+E AG
Sbjct: 244 KIEGEDLYLIATSEHPLAAYKMEEIIDESELPIKLAGVSPCFRKEAGAG 292
>gi|154284291|ref|XP_001542941.1| seryl-tRNA synthetase [Ajellomyces capsulatus NAm1]
gi|150411121|gb|EDN06509.1| seryl-tRNA synthetase [Ajellomyces capsulatus NAm1]
Length = 415
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 133/203 (65%), Gaps = 34/203 (16%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E GSHG+
Sbjct: 228 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGQG-------- 279
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA++K DL
Sbjct: 280 -----EQFVMTKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------------QKIY-----ATA 176
EAWFP G ++ELVSCSNC DYQ+R L +RY Q K +KIY AT
Sbjct: 333 EAWFPSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGADENKKIYVHALNATL 392
Query: 177 CATTRVICAILETHQTETGVRIP 199
CAT R +C ILE +QTET V +P
Sbjct: 393 CATERTLCCILENYQTET-VSLP 414
Score = 155 bits (393), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 98/139 (70%), Gaps = 14/139 (10%)
Query: 317 EQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 376
EQFV+T P D SW +M++NSEEFY LG+ YRVV+IVSGALN+AA++K DLEAWFP
Sbjct: 280 EQFVMTKPED--SWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWFP 337
Query: 377 GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKM----------NEKIEFVHMLNATACATT 426
G ++ELVSCSNC YQ+R L +RY Q K + N+KI +VH LNAT CAT
Sbjct: 338 SQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGADENKKI-YVHALNATLCATE 396
Query: 427 RVICAILETHQTETGVRIP 445
R +C ILE +QTET V +P
Sbjct: 397 RTLCCILENYQTET-VSLP 414
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D+ ++YLIATSEQP+ A+H WL ++ LPI+Y G STC+R+E
Sbjct: 228 EDKASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEA 273
>gi|167390181|ref|XP_001739240.1| seryl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
gi|165897139|gb|EDR24389.1| seryl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
SAW760]
Length = 189
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 135/196 (68%), Gaps = 17/196 (8%)
Query: 50 LGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYAD 109
+G ST FR+E G+HG+DT GIFRVHQFEK+EQF +T P D+SW+M +EMI+N+ +F+
Sbjct: 1 MGFSTNFRKEAGAHGKDTWGIFRVHQFEKIEQFCMTLP--DKSWEMHEEMIKNARDFFES 58
Query: 110 LGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK 169
L I YRVVNIVSGALN+AAAKK DLE +FPG +RELVSCSNC DYQSR L VR QT
Sbjct: 59 LKIPYRVVNIVSGALNNAAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTD 117
Query: 170 QK---------IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFV 220
+K + +T CAT R +C ILE +Q E G+ +P+ LR +V V +IPF+
Sbjct: 118 KKDKTKSYVHMLNSTLCATERALCCILENYQCEDGIIVPEVLRPYVGGV-----EKIPFI 172
Query: 221 KTAPIDEEETKKQKKQ 236
P+ +E KK K+
Sbjct: 173 APKPVWAKEEKKSTKK 188
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P D+SW+ +EMI+N+ +F+ L I YRVVNIVSGALN
Sbjct: 17 DTWGIFRVHQFEKIEQFCMTLP--DKSWEMHEEMIKNARDFFESLKIPYRVVNIVSGALN 74
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLE +FPG +RELVSCSNC YQSR L VR QT K ++ +VHMLN+T
Sbjct: 75 NAAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELEVRL-QTDKKDKTKSYVHMLNSTL 133
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CAT R +C ILE +Q E G+ +P+ LR +V V +IPF+ P+ +E KK K+
Sbjct: 134 CATERALCCILENYQCEDGIIVPEVLRPYVGGV-----EKIPFIAPKPVWAKEEKKSTKK 188
>gi|332158998|ref|YP_004424277.1| seryl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034461|gb|AEC52273.1| seryl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 456
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 138/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ + +I+N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHERIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQ E G V+IP L K+
Sbjct: 419 ENHQEEDGTVKIPKVLWKY 437
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 109/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ + +I+N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHERIIRNAEELFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + +EK +VH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQ E G V+IP L K+
Sbjct: 405 STAIATSRAIVAILENHQEEDGTVKIPKVLWKY 437
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 286
>gi|240104000|ref|YP_002960309.1| seryl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259516204|sp|C5A226.1|SYS_THEGJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|239911554|gb|ACS34445.1| Seryl-tRNA synthetase (serS) [Thermococcus gammatolerans EJ3]
Length = 455
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 138/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++I N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKIIANAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTDWQARRLNIRFRDKTHEKPKFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQTE G V++P L K+
Sbjct: 419 ENHQTEEGVVKLPKALWKY 437
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++I N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKIIANAEELFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +R+ K +EK +FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF--RDKTHEKPKFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
Score = 46.2 bits (108), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 286
>gi|14521535|ref|NP_127011.1| seryl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878800|sp|Q9UZ21.1|SYS_PYRAB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|5458754|emb|CAB50241.1| serS seryl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742144|tpe|CCE70778.1| TPA: seryl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 455
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 137/199 (68%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+G+S CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ + +I+N+EE + L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHERIIRNAEELFQKLEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQ E G V+IP L K+
Sbjct: 419 ENHQEEDGTVKIPKVLWKY 437
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 108/153 (70%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ + +I+N+EE + L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHERIIRNAEELFQKLEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + +EK +VH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQ E G V+IP L K+
Sbjct: 405 STAIATSRAIVAILENHQEEDGTVKIPKVLWKY 437
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+G+S CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISPCFRKEA 286
>gi|221052754|ref|XP_002261100.1| seryl-trna synthetase [Plasmodium knowlesi strain H]
gi|194247104|emb|CAQ38288.1| seryl-trna synthetase, putative [Plasmodium knowlesi strain H]
Length = 597
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 146/266 (54%), Gaps = 56/266 (21%)
Query: 5 GEKVGDSAPEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGS 62
G V + + DEL DD +LIATSEQP+CA+H+D + LP++Y GVS+CFR+E G+
Sbjct: 339 GAPVSKNLNQNDELSRDDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGA 398
Query: 63 HGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSG 122
HG+D RGI RVHQF+K+EQF L+ P S K+ +M++ EEFY L I YR+V+IVSG
Sbjct: 399 HGKDIRGILRVHQFDKIEQFCLSLPQT--SSKVHKQMMKTCEEFYQSLNIPYRIVSIVSG 456
Query: 123 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI---------- 172
ALN+AAA K DLE +FP S +RELVSCSNC DYQS L V+Y + +I
Sbjct: 457 ALNNAAAIKYDLEGYFPSSNQYRELVSCSNCTDYQSNNLNVKYVDSSVRITDVKEDRKKK 516
Query: 173 -------------------------------------YATACATTRVICAILETHQTETG 195
T A R +C +LE +Q G
Sbjct: 517 ENTGDHQDDDDDDEIGSDHEEFLKNFHTESRNNVHLLNGTMVAAQRFLCCLLENYQNGEG 576
Query: 196 VRIPDCLRKFVPAVYLNEAGEIPFVK 221
+ +P+ LR Y+N IPF++
Sbjct: 577 IVVPEKLRP-----YMNNVDFIPFIE 597
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 106/203 (52%), Gaps = 45/203 (22%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI RVHQF+K+EQF L+ P S K +M++ EEFY L I YR+V+IVSGALN
Sbjct: 402 DIRGILRVHQFDKIEQFCLSLPQT--SSKVHKQMMKTCEEFYQSLNIPYRIVSIVSGALN 459
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY------------GQTKKMN- 409
+AAA K DLE +FP S +RELVSCSNC YQS L V+Y + KK N
Sbjct: 460 NAAAIKYDLEGYFPSSNQYRELVSCSNCTDYQSNNLNVKYVDSSVRITDVKEDRKKKENT 519
Query: 410 -------------------------EKIEFVHMLNATACATTRVICAILETHQTETGVRI 444
E VH+LN T A R +C +LE +Q G+ +
Sbjct: 520 GDHQDDDDDDEIGSDHEEFLKNFHTESRNNVHLLNGTMVAAQRFLCCLLENYQNGEGIVV 579
Query: 445 PDCLRKFVPAVYVNEAGEIPFVK 467
P+ LR Y+N IPF++
Sbjct: 580 PEKLRP-----YMNNVDFIPFIE 597
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 521 GEKVGDSAPEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
G V + + DEL DD +LIATSEQP+CA+H+D + LP++Y GVS+CFR+E A
Sbjct: 339 GAPVSKNLNQNDELSRDDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGA 398
>gi|223477678|ref|YP_002582329.1| seryl-tRNA synthetase [Thermococcus sp. AM4]
gi|214032904|gb|EEB73732.1| Seryl-tRNA synthetase [Thermococcus sp. AM4]
Length = 455
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 138/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++I N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKIIANAEEIFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTDWQARRLNIRFRDKTHEKPKFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQTE G V++P L K+
Sbjct: 419 ENHQTEEGIVKLPKALWKY 437
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++I N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKIIANAEEIFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +R+ K +EK +FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF--RDKTHEKPKFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENHQTEEGIVKLPKALWKY 437
Score = 46.6 bits (109), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 286
>gi|388254915|gb|AFK25028.1| seryl-tRNA synthetase [uncultured archaeon]
Length = 420
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 127/196 (64%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D +LI TSE I A+H D L LP+RY GVS CFR+E G+HGRD +GIFRVHQFEK
Sbjct: 222 EDLFLIGTSEHAIAAMHSDEILQGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFEK 281
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQ+V P D SWK + M+ EEFY LGI YRV+ + SG L +AK DLEAW
Sbjct: 282 VEQYVFARPED--SWKEHESMLAIVEEFYQHLGIPYRVMVLSSGDLGKVSAKTYDLEAWM 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQ 191
G A+RE+VSCSNCLD+Q+RRL +R+ Q + +T ATTR + AI+E Q
Sbjct: 340 AGQNAYREIVSCSNCLDFQTRRLKIRFRDKTNEQTQYVHSLNSTLVATTRTLVAIMENFQ 399
Query: 192 TETG-VRIPDCLRKFV 206
T G + +P L+K++
Sbjct: 400 TRDGHISVPKPLQKYL 415
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 104/156 (66%), Gaps = 5/156 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQFEKVEQ+V P D SWK + M+ EEFY LGI YRV+ + SG L
Sbjct: 269 DQKGIFRVHQFEKVEQYVFARPED--SWKEHESMLAIVEEFYQHLGIPYRVMVLSSGDLG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK DLEAW G A+RE+VSCSNCL +Q+RRL +R+ K NE+ ++VH LN+T
Sbjct: 327 KVSAKTYDLEAWMAGQNAYREIVSCSNCLDFQTRRLKIRF--RDKTNEQTQYVHSLNSTL 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
ATTR + AI+E QT G + +P L+K++ + +
Sbjct: 385 VATTRTLVAIMENFQTRDGHISVPKPLQKYLGSALI 420
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D +LI TSE I A+H D L LP+RY GVS CFR+E A
Sbjct: 222 EDLFLIGTSEHAIAAMHSDEILQGKDLPLRYAGVSPCFRKEAGA 265
>gi|389861465|ref|YP_006363705.1| seryl-tRNA synthetase [Thermogladius cellulolyticus 1633]
gi|388526369|gb|AFK51567.1| seryl-tRNA synthetase [Thermogladius cellulolyticus 1633]
Length = 460
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 135/200 (67%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E + A+H D +PE +LP++Y+GVS CFR+E G+ RD +GIFRVH
Sbjct: 243 KVEGEDLYLIATAEHSLAALHADEDIPEEALPLKYVGVSPCFRKEAGAGSRDLKGIFRVH 302
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ESW +++E+I N+EE + L + YRVVNI SG L AAKK DL
Sbjct: 303 QFHKVEQFVYAKP--EESWDVMEELINNAEELFKGLELPYRVVNIASGDLGAPAAKKYDL 360
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQKIY---ATACATTRVICAIL 187
E W P G +RE+VSCSN D+Q+ RL +R G K+ ++ +TA A+TR I +IL
Sbjct: 361 ETWMPAQGLYREMVSCSNVTDWQAYRLKIRLVRRKGMVKEYVHTLNSTAIASTRTITSIL 420
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q G V +P LRK++
Sbjct: 421 ENYQEPDGVVVVPRALRKYL 440
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV P +ESW ++E+I N+EE + L + YRVVNI SG L
Sbjct: 294 DLKGIFRVHQFHKVEQFVYAKP--EESWDVMEELINNAEELFKGLELPYRVVNIASGDLG 351
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P G +RE+VSCSN +Q+ RL +R + K M + E+VH LN+TA
Sbjct: 352 APAAKKYDLETWMPAQGLYREMVSCSNVTDWQAYRLKIRLVRRKGMVK--EYVHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I +ILE +Q G V +P LRK++
Sbjct: 410 IASTRTITSILENYQEPDGVVVVPRALRKYL 440
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E + A+H D +PE +LP++Y+GVS CFR+E AG
Sbjct: 243 KVEGEDLYLIATAEHSLAALHADEDIPEEALPLKYVGVSPCFRKEAGAG 291
>gi|402468745|gb|EJW03857.1| serine-tRNA ligase [Edhazardia aedis USNM 41457]
Length = 452
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 135/206 (65%), Gaps = 14/206 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ +LIATSEQP+ A + D P++++G S CFR+E G+HG+D GIFR+HQFEK
Sbjct: 256 DEYFLIATSEQPLTAYYSDEI---CKTPVKFVGQSLCFRKEAGAHGKDNHGIFRIHQFEK 312
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQ V+ DDES EMI+N+ +FY L I+Y VV+IVSG LN AAA K DLEA+F
Sbjct: 313 IEQLVIC--QDDESDSYFSEMIKNAMDFYKSLDISYNVVSIVSGELNDAAAIKYDLEAYF 370
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---KIYATACATTRVICAILETHQTETG 195
P S FRELVSCSNC DYQSR L VR K+ + T A R +C I+E +QT++G
Sbjct: 371 PHSDRFRELVSCSNCTDYQSRDLNVRVSHQKKFPHMLNCTVAAIQRALCCIVENYQTDSG 430
Query: 196 VRIPDCLRKFVPAVYLNEAGEIPFVK 221
+ +PD L+ ++ + IP+V+
Sbjct: 431 IEVPDVLKGYMKKDF------IPYVE 450
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 106/165 (64%), Gaps = 14/165 (8%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFR+HQFEK+EQ V+ DDES EMI+N+ +FY L I+Y VV+IVSG LN
Sbjct: 300 DNHGIFRIHQFEKIEQLVIC--QDDESDSYFSEMIKNAMDFYKSLDISYNVVSIVSGELN 357
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLEA+FP S FRELVSCSNC YQSR L VR KK F HMLN T
Sbjct: 358 DAAAIKYDLEAYFPHSDRFRELVSCSNCTDYQSRDLNVRVSHQKK------FPHMLNCTV 411
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVK 467
A R +C I+E +QT++G+ +PD L+ ++ + IP+V+
Sbjct: 412 AAIQRALCCIVENYQTDSGIEVPDVLKGYMKKDF------IPYVE 450
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 515 REVIGKGEKVGDSAPEKDELDDKY-LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
++V+ K ++ D + + D+Y LIATSEQP+ A + D P++++G S CFR
Sbjct: 235 KDVMAKTAQLSDFDDQLYSMGDEYFLIATSEQPLTAYYSDEI---CKTPVKFVGQSLCFR 291
Query: 574 QECDA 578
+E A
Sbjct: 292 KEAGA 296
>gi|296242418|ref|YP_003649905.1| seryl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
gi|296095002|gb|ADG90953.1| seryl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
Length = 460
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 133/200 (66%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E + A+H + L E LP++Y G+S CFR+E G+ RD +GIFRVH
Sbjct: 243 KIEGEDLYLIATAEHSLAALHYNEDLEEEVLPLKYAGISPCFRKEAGAGSRDLKGIFRVH 302
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQ+V P +ESW +++E+I N+EE + L + YR+VNI SG L AAKK DL
Sbjct: 303 QFHKIEQYVYAKP--EESWDLMEELIGNAEELFKGLELPYRIVNIASGDLGAPAAKKYDL 360
Query: 135 EAWFPGSGAFRELVSCSNCLDYQS----RRLLVRYGQTKQKIY---ATACATTRVICAIL 187
E W P G FRE+VSCSN D+QS RL+ R G K+ ++ +TA A+TR I AIL
Sbjct: 361 ETWMPAQGLFREMVSCSNTTDWQSYRLRTRLIRRKGMVKEYVHTLNSTAIASTRTITAIL 420
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E HQ E G V IP LRK++
Sbjct: 421 ENHQQEDGTVYIPKVLRKYL 440
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF K+EQ+V P +ESW ++E+I N+EE + L + YR+VNI SG L
Sbjct: 294 DLKGIFRVHQFHKIEQYVYAKP--EESWDLMEELIGNAEELFKGLELPYRIVNIASGDLG 351
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P G FRE+VSCSN +QS RL R + K M + E+VH LN+TA
Sbjct: 352 APAAKKYDLETWMPAQGLFREMVSCSNTTDWQSYRLRTRLIRRKGMVK--EYVHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I AILE HQ E G V IP LRK++
Sbjct: 410 IASTRTITAILENHQQEDGTVYIPKVLRKYL 440
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E + A+H + L E LP++Y G+S CFR+E AG
Sbjct: 243 KIEGEDLYLIATAEHSLAALHYNEDLEEEVLPLKYAGISPCFRKEAGAG 291
>gi|389852601|ref|YP_006354835.1| seryl-tRNA synthetase [Pyrococcus sp. ST04]
gi|388249907|gb|AFK22760.1| seryl-tRNA synthetase [Pyrococcus sp. ST04]
Length = 455
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/223 (47%), Positives = 144/223 (64%), Gaps = 21/223 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+ S CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGLHANEILDGKDLPLLYVAFSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ + +I+N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHERIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEE 229
E HQ E G V+IP L K+ F + P+D++E
Sbjct: 419 ENHQQEDGTVKIPKVLWKYT-----------GFKEIVPVDKKE 450
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 117/177 (66%), Gaps = 16/177 (9%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ + +I+N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHERIIRNAEELFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + +EK +VH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEE 475
+TA AT+R I AILE HQ E G V+IP L K+ F + P+D++E
Sbjct: 405 STAIATSRAIVAILENHQQEDGTVKIPKVLWKYT-----------GFKEIVPVDKKE 450
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+ S CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGLHANEILDGKDLPLLYVAFSPCFRKEA 286
>gi|409095085|ref|ZP_11215109.1| seryl-tRNA ligase [Thermococcus zilligii AN1]
Length = 455
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 137/199 (68%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H D L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGLHADEILDGNDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++I N+EE + L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKIIANAEEIFQALEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC ++Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTEWQARRLNIRFRDRTNEKPRFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQTE G V++P L K+
Sbjct: 419 ENHQTEEGVVKLPKALWKY 437
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 108/153 (70%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++I N+EE + L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKIIANAEEIFQALEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +R+ + NEK FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRF--RDRTNEKPRFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
Score = 48.1 bits (113), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H D L LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGLHADEILDGNDLPLLYVGVSPCFRKEA 286
>gi|57641075|ref|YP_183553.1| seryl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|67461627|sp|Q5JE75.1|SYS_PYRKO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|57159399|dbj|BAD85329.1| Seryl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 455
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 136/199 (68%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ + +I N+EE + L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHERIIANAEEIFQALEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTDWQARRLNIRFRDKTHEKPRFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQTE G V++P L K+
Sbjct: 419 ENHQTEEGVVKLPKALWKY 437
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 107/153 (69%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ + +I N+EE + L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHERIIANAEEIFQALEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +R+ K +EK FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF--RDKTHEKPRFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
Score = 46.2 bits (108), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 286
>gi|332796823|ref|YP_004458323.1| seryl-tRNA synthetase [Acidianus hospitalis W1]
gi|332694558|gb|AEE94025.1| seryl-tRNA synthetase [Acidianus hospitalis W1]
Length = 455
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/228 (46%), Positives = 139/228 (60%), Gaps = 21/228 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIAT+E P+ A++ + + LPI+ +G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENDDLYLIATAEHPLAALYYKEDIEKEELPIKLVGISPAFRREAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ + P D SWK E++ N+EE + LGI YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSLPED--SWKYHQELLSNAEEIFQGLGIPYRIVNIASGDLGACAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
EAW P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EAWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKKGYVHTLNSTAVASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
E Q E G V IP LRK++ PF K AP D +K+K
Sbjct: 419 ENFQNEDGTVEIPKVLRKYLE----------PF-KAAPKDYIYPRKKK 455
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 113/182 (62%), Gaps = 16/182 (8%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ + P D SWK E++ N+EE + LGI YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSLPED--SWKYHQELLSNAEEIFQGLGIPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLEAW P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKYDLEAWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKKGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKK 478
+TA A+TR I AILE Q E G V IP LRK++ PF K AP D +K
Sbjct: 405 STAVASTRTITAILENFQNEDGTVEIPKVLRKYLE----------PF-KAAPKDYIYPRK 453
Query: 479 QK 480
+K
Sbjct: 454 KK 455
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E DD YLIAT+E P+ A++ + + LPI+ +G+S FR+E A
Sbjct: 241 KIENDDLYLIATAEHPLAALYYKEDIEKEELPIKLVGISPAFRREAGAA 289
>gi|374725188|gb|EHR77268.1| seryl-tRNA synthetase [uncultured marine group II euryarchaeote]
Length = 430
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 135/198 (68%), Gaps = 10/198 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D Y+IAT+E P+ A+ +PE+ LP+R +GVS CFR+EVGSHG+ GI+RVHQF
Sbjct: 223 EPDKYYMIATAEHPLTAMFMGETIPESDLPLRIVGVSPCFRREVGSHGQSDLGIWRVHQF 282
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
K+EQ ++ SP D+SW++ +E++QN + + LG+ Y VVNI +G + AAKK DLEA
Sbjct: 283 TKIEQIIIASP--DQSWELQEELLQNCVDLWDALGMHYEVVNICTGDMGTVAAKKYDLEA 340
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ-------TKQKIYATACATTRVICAILET 189
W PG+ ++E+VSCSNC DYQ+ RL +RYGQ + +TA AT+R + AI+E
Sbjct: 341 WIPGAEQYKEIVSCSNCTDYQANRLQIRYGQPGHAGQPIAHTLNSTAVATSRALVAIMEQ 400
Query: 190 HQTETG-VRIPDCLRKFV 206
+Q E G VRIP+ L+ +
Sbjct: 401 NQMEDGRVRIPEVLQPLM 418
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 101/148 (68%), Gaps = 5/148 (3%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GI+RVHQF K+EQ ++ SP D+SW+ +E++QN + + LG+ Y VVNI +G + A
Sbjct: 275 GIWRVHQFTKIEQIIIASP--DQSWELQEELLQNCVDLWDALGMHYEVVNICTGDMGTVA 332
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 425
AKK DLEAW PG+ ++E+VSCSNC YQ+ RL +RYGQ + I H LN+TA AT
Sbjct: 333 AKKYDLEAWIPGAEQYKEIVSCSNCTDYQANRLQIRYGQPGHAGQPI--AHTLNSTAVAT 390
Query: 426 TRVICAILETHQTETG-VRIPDCLRKFV 452
+R + AI+E +Q E G VRIP+ L+ +
Sbjct: 391 SRALVAIMEQNQMEDGRVRIPEVLQPLM 418
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC------DAGMCRTY 584
E D Y+IAT+E P+ A+ +PE+ LP+R +GVS CFR+E D G+ R +
Sbjct: 223 EPDKYYMIATAEHPLTAMFMGETIPESDLPLRIVGVSPCFRREVGSHGQSDLGIWRVH 280
>gi|390961750|ref|YP_006425584.1| seryl-tRNA synthetase [Thermococcus sp. CL1]
gi|390520058|gb|AFL95790.1| seryl-tRNA synthetase [Thermococcus sp. CL1]
Length = 455
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 138/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + + LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEIIEGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++I N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKLIANAEEIFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC ++Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTEWQARRLNIRFRDKTHEKPKFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQTE G V++P L K+
Sbjct: 419 ENHQTEEGVVKLPKALWKY 437
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++I N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKLIANAEEIFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +R+ K +EK +FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRF--RDKTHEKPKFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
Score = 45.8 bits (107), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + + LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEIIEGKDLPLLYVGVSPCFRKEA 286
>gi|156094491|ref|XP_001613282.1| seryl-tRNA synthetase [Plasmodium vivax Sal-1]
gi|148802156|gb|EDL43555.1| seryl-tRNA synthetase, putative [Plasmodium vivax]
Length = 616
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 142/258 (55%), Gaps = 57/258 (22%)
Query: 14 EKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIF 71
+ DEL DD +LIATSEQP+CA+H+D + LP++Y GVS+CFR+E G+HG+D RGI
Sbjct: 366 QNDELSRDDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGAHGKDIRGIL 425
Query: 72 RVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKK 131
RVHQF+K+EQF ++ P S K+ EM++ EEFY L I YR+V+IVSGALN+AAA K
Sbjct: 426 RVHQFDKIEQFCVSLPQT--SNKVHKEMMKTCEEFYQSLNIPYRIVSIVSGALNNAAAVK 483
Query: 132 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI------------------- 172
DLE +FP S +RELVSCSNC DYQS L V+Y + K+
Sbjct: 484 FDLEGYFPASNQYRELVSCSNCTDYQSNNLNVKYVDSSVKVGDFKESGGSGGGGGEGNGK 543
Query: 173 -----------------------------YATACATTRVICAILETHQTETGVRIPDCLR 203
T A R +C +LE +Q G+ +P+ LR
Sbjct: 544 GNYHDEVGSDYEDFLQNFQTESRNTVHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLR 603
Query: 204 KFVPAVYLNEAGEIPFVK 221
Y+N IPF +
Sbjct: 604 P-----YMNNVEFIPFTE 616
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 102/204 (50%), Gaps = 46/204 (22%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI RVHQF+K+EQF ++ P S K EM++ EEFY L I YR+V+IVSGALN
Sbjct: 420 DIRGILRVHQFDKIEQFCVSLPQT--SNKVHKEMMKTCEEFYQSLNIPYRIVSIVSGALN 477
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKK--------------- 407
+AAA K DLE +FP S +RELVSCSNC YQS L V+Y +
Sbjct: 478 NAAAVKFDLEGYFPASNQYRELVSCSNCTDYQSNNLNVKYVDSSVKVGDFKESGGSGGGG 537
Query: 408 ------------------------MNEKIEFVHMLNATACATTRVICAILETHQTETGVR 443
E VH+LN T A R +C +LE +Q G+
Sbjct: 538 GEGNGKGNYHDEVGSDYEDFLQNFQTESRNTVHLLNGTMVAAQRFLCCLLENYQNGEGIV 597
Query: 444 IPDCLRKFVPAVYVNEAGEIPFVK 467
+P+ LR Y+N IPF +
Sbjct: 598 VPEKLRP-----YMNNVEFIPFTE 616
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 530 EKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+ DEL DD +LIATSEQP+CA+H+D + LP++Y GVS+CFR+E A
Sbjct: 366 QNDELSRDDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGA 416
>gi|18977576|ref|NP_578933.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|397651704|ref|YP_006492285.1| seryl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30173185|sp|Q8U1K2.1|SYS_PYRFU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|18893291|gb|AAL81328.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|393189295|gb|AFN03993.1| seryl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 455
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 136/199 (68%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+ S CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVAFSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ + +++N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHERLVRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQ E G V+IP L K+
Sbjct: 419 ENHQQEDGTVKIPRALWKY 437
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 109/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ + +++N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHERLVRNAEELFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + +EK +VH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQ E G V+IP L K+
Sbjct: 405 STAIATSRAIVAILENHQQEDGTVKIPRALWKY 437
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+ S CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVAFSPCFRKEA 286
>gi|358373335|dbj|GAA89934.1| seryl-tRNA synthetase [Aspergillus kawachii IFO 4308]
Length = 462
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 142/232 (61%), Gaps = 29/232 (12%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
+D+ DKYLIATSEQP+ A+H WL + LPI+ L V C + G+
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIK-LVVPACLVNF-------SLGLTSTQ 281
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
+EQFVLT P D SW+ DEM+ SEEFY LG+ Y+VV IVSGALN+AA+KK DL
Sbjct: 282 ----IEQFVLTKPED--SWQAFDEMMATSEEFYRSLGLPYQVVAIVSGALNNAASKKYDL 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICA 185
EAWFP G ++ELVSCSNC DYQSR L +RYG K +K Y AT CAT R +C
Sbjct: 336 EAWFPFQGEYKELVSCSNCTDYQSRALEIRYGTKKATDVKKSYVHALNATLCATERTLCC 395
Query: 186 ILETHQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVKTAPIDEEETKKQKKQ 236
+LE +QT+ G+ +P+ LRK++P A E IP+ K P D K + KQ
Sbjct: 396 VLENYQTDDGIIVPEPLRKYIPG-----APEFIPYSKELPKDSTSQKNKAKQ 442
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 115/169 (68%), Gaps = 8/169 (4%)
Query: 315 KVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAW 374
++EQFVLT P D SW+ DEM+ SEEFY LG+ Y+VV IVSGALN+AA+KK DLEAW
Sbjct: 281 QIEQFVLTKPED--SWQAFDEMMATSEEFYRSLGLPYQVVAIVSGALNNAASKKYDLEAW 338
Query: 375 FPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 434
FP G ++ELVSCSNC YQSR L +RYG K + K +VH LNAT CAT R +C +LE
Sbjct: 339 FPFQGEYKELVSCSNCTDYQSRALEIRYGTKKATDVKKSYVHALNATLCATERTLCCVLE 398
Query: 435 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPIDEEETKKQKKQ 482
+QT+ G+ +P+ LRK++P A E IP+ K P D K + KQ
Sbjct: 399 NYQTDDGIIVPEPLRKYIPG-----APEFIPYSKELPKDSTSQKNKAKQ 442
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 572
+D+ DKYLIATSEQP+ A+H WL + LPI+ L V C
Sbjct: 230 EDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIK-LVVPACL 270
>gi|374628558|ref|ZP_09700943.1| seryl-tRNA synthetase [Methanoplanus limicola DSM 2279]
gi|373906671|gb|EHQ34775.1| seryl-tRNA synthetase [Methanoplanus limicola DSM 2279]
Length = 425
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 132/197 (67%), Gaps = 11/197 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D++LIATSE P+ A++ D E LPIR G+S CFR+E+G+HG DTRG+FRVHQF K
Sbjct: 225 EDEFLIATSEHPMAAMYMDEIFEEKDLPIRMAGISPCFRREIGAHGLDTRGLFRVHQFNK 284
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF+ P D SW M +E+++NSE+ Y LG+ YRVVNI +G + AAKK D+E W
Sbjct: 285 VEQFIYCKPED--SWAMHEELLKNSEDLYQMLGLPYRVVNICTGDIGTVAAKKYDMEVWM 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY---ATACATTRVICAILETH 190
P +RE+VSCSNC YQS RL ++ +TK ++ +TA ATTR I AI+E +
Sbjct: 343 PREETYREVVSCSNCTAYQSVRLNIKVRDAHDFETKNFVHTLNSTAVATTRTIRAIMENY 402
Query: 191 QTETG-VRIPDCLRKFV 206
Q E G V +P LR ++
Sbjct: 403 QEEGGTVVVPKVLRPYM 419
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDTRG+FRVHQF KVEQF+ P D SW +E+++NSE+ Y LG+ YRVVNI +G +
Sbjct: 271 LDTRGLFRVHQFNKVEQFIYCKPED--SWAMHEELLKNSEDLYQMLGLPYRVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+E W P +RE+VSCSNC AYQS RL ++ K FVH LN+T
Sbjct: 329 GTVAAKKYDMEVWMPREETYREVVSCSNCTAYQSVRLNIKVRDAHDFETK-NFVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A ATTR I AI+E +Q E G V +P LR ++
Sbjct: 388 AVATTRTIRAIMENYQEEGGTVVVPKVLRPYM 419
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 40/146 (27%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREG 594
+D++LIATSE P+ A++ D E LPIR G+S CFR+E A T G
Sbjct: 225 EDEFLIATSEHPMAAMYMDEIFEEKDLPIRMAGISPCFRREIGAHGLDT---------RG 275
Query: 595 LLSEATSEEVDQADPFYAHCR------LHADKLEDFSKFSKIL-----VCCVCLGE---- 639
L +V+Q + +C+ +H + L++ ++L V +C G+
Sbjct: 276 LFRVHQFNKVEQ----FIYCKPEDSWAMHEELLKNSEDLYQMLGLPYRVVNICTGDIGTV 331
Query: 640 ------------RSDDVNEIVECDSC 653
R + E+V C +C
Sbjct: 332 AAKKYDMEVWMPREETYREVVSCSNC 357
>gi|296419076|ref|XP_002839147.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635149|emb|CAZ83338.1| unnamed protein product [Tuber melanosporum]
Length = 219
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 130/201 (64%), Gaps = 12/201 (5%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
+E +DKYLIATSEQPI +H D WL + LPIRY S+C+ +E G+HG+D GIFRVHQ
Sbjct: 22 EEKNDKYLIATSEQPISGLHADEWLQQKGLPIRYASFSSCYSREAGAHGKDAWGIFRVHQ 81
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
FEK+EQFV+T P ++SW+ DE+I SEEFY L I YR V IVSGALN+AAAK D+E
Sbjct: 82 FEKLEQFVITHP--EKSWEAFDEIINYSEEFYKSLNIPYRDVAIVSGALNNAAAKIYDVE 139
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAI 186
AWFP G +EL S +YQ R +RY Q + +T C T +C +
Sbjct: 140 AWFPFKGEHKELKS-PITTNYQPRNPEMRYRTNSQSDTVKEYVHCLNSTLCVTQCSLCCL 198
Query: 187 LETHQTETGVRIPDCLRKFVP 207
LE +QT + +P+ LRK++P
Sbjct: 199 LENYQTTECINVPEPLRKYIP 219
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQFV+T P ++SW+ DE+I SEEFY L I YR V IVSGALN
Sbjct: 72 DAWGIFRVHQFEKLEQFVITHP--EKSWEAFDEIINYSEEFYKSLNIPYRDVAIVSGALN 129
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAK D+EAWFP G +EL S YQ R +RY + + E+VH LN+T
Sbjct: 130 NAAAKIYDVEAWFPFKGEHKELKS-PITTNYQPRNPEMRYRTNSQSDTVKEYVHCLNSTL 188
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVP 453
C T +C +LE +QT + +P+ LRK++P
Sbjct: 189 CVTQCSLCCLLENYQTTECINVPEPLRKYIP 219
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+E +DKYLIATSEQPI +H D WL + LPIRY S+C+ +E A
Sbjct: 22 EEKNDKYLIATSEQPISGLHADEWLQQKGLPIRYASFSSCYSREAGA 68
>gi|124485533|ref|YP_001030149.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z]
gi|166222742|sp|A2SRC6.1|SYS_METLZ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|124363074|gb|ABN06882.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z]
Length = 425
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 11/201 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIAT+E P+ A+++D E LP++ +G+S CFR+E+G+HG D+RG+FRVH
Sbjct: 221 KIEDDDAYLIATAEHPMAAMYQDEIFEEKDLPLKMVGISPCFRREIGAHGLDSRGLFRVH 280
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQF+ P ++SW+M +E++ N+EE + LG+ YRVVNI +G + AAKK D+
Sbjct: 281 QFTKIEQFIYCMP--EKSWEMHEELLANAEEIFTKLGLPYRVVNICTGDIGTVAAKKYDM 338
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY---ATACATTRVICAI 186
EAW P +RE+VSCSNC YQS RL +R ++KQ ++ +TA AT+R + I
Sbjct: 339 EAWMPRDNEYREVVSCSNCTAYQSVRLNIRVRDAHDFESKQWLHTLNSTAVATSRALRCI 398
Query: 187 LETHQTETG-VRIPDCLRKFV 206
LE +QTE G V IP LR ++
Sbjct: 399 LENYQTEDGKVEIPKVLRPYM 419
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 103/152 (67%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LD+RG+FRVHQF K+EQF+ P ++SW+ +E++ N+EE + LG+ YRVVNI +G +
Sbjct: 271 LDSRGLFRVHQFTKIEQFIYCMP--EKSWEMHEELLANAEEIFTKLGLPYRVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+EAW P +RE+VSCSNC AYQS RL +R K +++H LN+T
Sbjct: 329 GTVAAKKYDMEAWMPRDNEYREVVSCSNCTAYQSVRLNIRVRDAHDFESK-QWLHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R + ILE +QTE G V IP LR ++
Sbjct: 388 AVATSRALRCILENYQTEDGKVEIPKVLRPYM 419
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 32/146 (21%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E DD YLIAT+E P+ A+++D E LP++ +G+S CFR+E A G+ R +
Sbjct: 221 KIEDDDAYLIATAEHPMAAMYQDEIFEEKDLPLKMVGISPCFRREIGAHGLDSRGLFRVH 280
Query: 585 FHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADKLEDFSKFS-KILVCCVCLGE---- 639
Q + E + E H L A+ E F+K V +C G+
Sbjct: 281 QFTKIEQFIYCMPEKSWE---------MHEELLANAEEIFTKLGLPYRVVNICTGDIGTV 331
Query: 640 ------------RSDDVNEIVECDSC 653
R ++ E+V C +C
Sbjct: 332 AAKKYDMEAWMPRDNEYREVVSCSNC 357
>gi|408404385|ref|YP_006862368.1| serine--tRNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364981|gb|AFU58711.1| serine--tRNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
Length = 426
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 10/203 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D Y+I TSE I ++H D L LPIRY G S CFR+E G+HG+D +GIFRVH
Sbjct: 219 KVEGEDLYMIGTSEHAIASMHMDEILDGKKLPIRYAGYSPCFRKEAGAHGKDMKGIFRVH 278
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVEQFV P D SWK + M+ SEEFY LGI RV+ + SG +AK D+
Sbjct: 279 QFEKVEQFVYCRPED--SWKEHERMLALSEEFYNRLGIPNRVMLLCSGDTGKISAKTYDI 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
EAW G A+RE+VSCSNC+DYQ+RRL +R+ + + +T AT R + AIL
Sbjct: 337 EAWMAGQNAYREIVSCSNCVDYQARRLGIRFRDRTNEETRLVHTLNSTLVATERTMVAIL 396
Query: 188 ETHQTETG-VRIPDCLRKFVPAV 209
E +QT G V +PD L+K++ +
Sbjct: 397 ENYQTSNGTVEVPDALQKYMGGI 419
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 5/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQFEKVEQFV P D SWK + M+ SEEFY LGI RV+ + SG
Sbjct: 270 DMKGIFRVHQFEKVEQFVYCRPED--SWKEHERMLALSEEFYNRLGIPNRVMLLCSGDTG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+EAW G A+RE+VSCSNC+ YQ+RRL +R+ + NE+ VH LN+T
Sbjct: 328 KISAKTYDIEAWMAGQNAYREIVSCSNCVDYQARRLGIRF--RDRTNEETRLVHTLNSTL 385
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
AT R + AILE +QT G V +PD L+K++ +
Sbjct: 386 VATERTMVAILENYQTSNGTVEVPDALQKYMGGI 419
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D Y+I TSE I ++H D L LPIRY G S CFR+E A
Sbjct: 219 KVEGEDLYMIGTSEHAIASMHMDEILDGKKLPIRYAGYSPCFRKEAGA 266
>gi|269860513|ref|XP_002649977.1| seryl-tRNA synthetase [Enterocytozoon bieneusi H348]
gi|220066596|gb|EED44072.1| seryl-tRNA synthetase [Enterocytozoon bieneusi H348]
Length = 426
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 131/202 (64%), Gaps = 11/202 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ YLIATSEQP+ + + ++ LP Y G S CFR+E G+HG+D GIFRVHQFEK
Sbjct: 227 DNMYLIATSEQPLTTLFMEKRFTDSELPKMYAGESLCFRKEAGAHGKDNAGIFRVHQFEK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF++ P +ES+ ++MI +E+FY L I +R V I SG +N AA+KK DLEAWF
Sbjct: 287 IEQFIICKP--EESYAYHEKMILLAEDFYKTLEIPFRTVLIASGEMNDAASKKYDLEAWF 344
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICAILETH 190
P + +RELVS SNC DYQSR L V YG +K+ + AT CA R +C ++E +
Sbjct: 345 PNAQKYRELVSASNCTDYQSRNLNVYYGYSKKNEKPQYVHMLNATLCAVQRTLCCLVENY 404
Query: 191 QTETG-VRIPDCLRKFVPAVYL 211
Q G +RIP L+K++ Y+
Sbjct: 405 QDANGKIRIPKVLQKYLNFEYI 426
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 108/156 (69%), Gaps = 4/156 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVHQFEK+EQF++ P +ES+ ++MI +E+FY L I +R V I SG +N
Sbjct: 274 DNAGIFRVHQFEKIEQFIICKP--EESYAYHEKMILLAEDFYKTLEIPFRTVLIASGEMN 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+KK DLEAWFP + +RELVS SNC YQSR L V YG +KK NEK ++VHMLNAT
Sbjct: 332 DAASKKYDLEAWFPNAQKYRELVSASNCTDYQSRNLNVYYGYSKK-NEKPQYVHMLNATL 390
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
CA R +C ++E +Q G +RIP L+K++ Y+
Sbjct: 391 CAVQRTLCCLVENYQDANGKIRIPKVLQKYLNFEYI 426
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+ YLIATSEQP+ + + ++ LP Y G S CFR+E A
Sbjct: 227 DNMYLIATSEQPLTTLFMEKRFTDSELPKMYAGESLCFRKEAGA 270
>gi|118575306|ref|YP_875049.1| seryl-tRNA synthetase [Cenarchaeum symbiosum A]
gi|166228637|sp|A0RTS8.1|SYS_CENSY RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118193827|gb|ABK76745.1| seryl-tRNA synthetase [Cenarchaeum symbiosum A]
Length = 418
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 131/200 (65%), Gaps = 11/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLI TSE + A+H D + E LP+RY GVS CFR+E G+HG+D +GIFRVH
Sbjct: 217 KIEDDDLYLIGTSEHAMAAMHSDEII-EGGLPLRYAGVSPCFRKEAGAHGKDQKGIFRVH 275
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+K+EQFV + P D SW+ D M++ +EEFY LGI YRVV + SG + +AK D+
Sbjct: 276 QFDKIEQFVFSKPED--SWREHDRMLEITEEFYQGLGIPYRVVLLSSGDMGKVSAKTYDI 333
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAIL 187
E W A+RE+VSCSNCLD+QSRRL VR+ Q + +T AT+R++ I+
Sbjct: 334 ECWMAAQDAYREVVSCSNCLDFQSRRLKVRFRDRTDEDTQYVHTLNSTLAATSRLLACII 393
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E Q G +R+P L+K+V
Sbjct: 394 ENFQEADGTIRVPQPLQKYV 413
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF+K+EQFV + P D SW+ D M++ +EEFY LGI YRVV + SG +
Sbjct: 267 DQKGIFRVHQFDKIEQFVFSKPED--SWREHDRMLEITEEFYQGLGIPYRVVLLSSGDMG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+E W A+RE+VSCSNCL +QSRRL VR+ + +E ++VH LN+T
Sbjct: 325 KVSAKTYDIECWMAAQDAYREVVSCSNCLDFQSRRLKVRF--RDRTDEDTQYVHTLNSTL 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT+R++ I+E Q G +R+P L+K+V
Sbjct: 383 AATSRLLACIIENFQEADGTIRVPQPLQKYV 413
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E DD YLI TSE + A+H D + E LP+RY GVS CFR+E A
Sbjct: 217 KIEDDDLYLIGTSEHAMAAMHSDEII-EGGLPLRYAGVSPCFRKEAGA 263
>gi|126466244|ref|YP_001041353.1| seryl-tRNA synthetase [Staphylothermus marinus F1]
gi|166223294|sp|A3DP85.1|SYS_STAMF RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|126015067|gb|ABN70445.1| seryl-tRNA synthetase [Staphylothermus marinus F1]
Length = 459
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 143/230 (62%), Gaps = 21/230 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E P+ A+H +PE LP++Y+G+S CFR+E G+ RD +GIFRVH
Sbjct: 243 KIEGEDLYLIATAEHPLAALHAWEDIPEEELPLKYVGISPCFRKEAGAGNRDLKGIFRVH 302
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P D SW +++E+I N+E + LGI YR+VNI SG L AAKK DL
Sbjct: 303 QFHKVEQFVYAKPED--SWDIMEELISNAEHLFRGLGIPYRIVNIASGDLGAPAAKKYDL 360
Query: 135 EAWFPGSGAFRELVSCSNCLDYQS----RRLLVRYGQTKQKIY---ATACATTRVICAIL 187
EAW P G +RE+VSCSN D+Q+ RL+ R G K+ ++ +TA A+TR I AIL
Sbjct: 361 EAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVKEYLHTLNSTAIASTRTITAIL 420
Query: 188 ETHQTETG-VRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
E Q G V +P LRK++ K+APID K++K
Sbjct: 421 ENFQEPDGTVIVPKVLRKYLEV-----------FKSAPIDAIHPVKKEKN 459
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 110/181 (60%), Gaps = 16/181 (8%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV P D SW ++E+I N+E + LGI YR+VNI SG L
Sbjct: 294 DLKGIFRVHQFHKVEQFVYAKPED--SWDIMEELISNAEHLFRGLGIPYRIVNIASGDLG 351
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLEAW P G +RE+VSCSN +Q+ RL +R + K M + E++H LN+TA
Sbjct: 352 APAAKKYDLEAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVK--EYLHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
A+TR I AILE Q G V +P LRK++ K+APID K++K
Sbjct: 410 IASTRTITAILENFQEPDGTVIVPKVLRKYLEV-----------FKSAPIDAIHPVKKEK 458
Query: 482 Q 482
Sbjct: 459 N 459
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E P+ A+H +PE LP++Y+G+S CFR+E AG
Sbjct: 243 KIEGEDLYLIATAEHPLAALHAWEDIPEEELPLKYVGISPCFRKEAGAG 291
>gi|374634040|ref|ZP_09706405.1| seryl-tRNA synthetase [Metallosphaera yellowstonensis MK1]
gi|373523828|gb|EHP68748.1| seryl-tRNA synthetase [Metallosphaera yellowstonensis MK1]
Length = 454
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 129/200 (64%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A++ + LP+RY+G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIEEEDLYLIATAEHAIAALYYKEEIDATRLPLRYVGLSPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ + P D SWK+ +E+I N+EE + L + YRVVNI SG L AAKK DL
Sbjct: 301 QFNKVEQFIFSLPED--SWKLHEELISNAEEIFRGLELPYRVVNIASGDLGACAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA ATTR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMRIRYVDRKNNRKGYVHTLNSTAIATTRAITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V IP LRK++
Sbjct: 419 ENNQMEDGTVVIPKVLRKYL 438
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 103/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ + P D SWK +E+I N+EE + L + YRVVNI SG
Sbjct: 289 ANKDLKGIFRVHQFNKVEQFIFSLPED--SWKLHEELISNAEEIFRGLELPYRVVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N + +VH LN
Sbjct: 347 DLGACAAKKYDLEVWMPAQAKFREMVSCSNCTDWQAFRMRIRYVDRK--NNRKGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA ATTR I AILE +Q E G V IP LRK++
Sbjct: 405 STAIATTRAITAILENNQMEDGTVVIPKVLRKYL 438
Score = 44.3 bits (103), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E I A++ + LP+RY+G+S FR+E A
Sbjct: 241 KIEEEDLYLIATAEHAIAALYYKEEIDATRLPLRYVGLSPAFRKEAGAA 289
>gi|432331118|ref|YP_007249261.1| seryl-tRNA synthetase [Methanoregula formicicum SMSP]
gi|432137827|gb|AGB02754.1| seryl-tRNA synthetase [Methanoregula formicicum SMSP]
Length = 425
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 133/197 (67%), Gaps = 11/197 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLIATSE PI A+++D E LP+R G+S CFR+E+G+HG DT+G+FRVHQF K
Sbjct: 225 DDAYLIATSEHPIGAMYQDEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVHQFTK 284
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV P D SW + +E++ N+EE + L + Y VVNI +G + AAKK D+E W
Sbjct: 285 VEQFVFCKPED--SWTIHEELLANAEEIFQGLDLPYHVVNICTGDIGTVAAKKYDIEVWM 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY---ATACATTRVICAILETH 190
P A++E+VSCSNC YQ+ RL +R ++KQ ++ +TA AT+RV+ AILE +
Sbjct: 343 PRENAYKEVVSCSNCTSYQAVRLNIRVRDKSDFESKQHVHTLNSTAIATSRVLRAILENN 402
Query: 191 QTETG-VRIPDCLRKFV 206
Q E G V IP+ LR ++
Sbjct: 403 QQEDGSVLIPEVLRPYM 419
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 102/152 (67%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF KVEQFV P D SW +E++ N+EE + L + Y VVNI +G +
Sbjct: 271 LDTKGLFRVHQFTKVEQFVFCKPED--SWTIHEELLANAEEIFQGLDLPYHVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+E W P A++E+VSCSNC +YQ+ RL +R + K E + VH LN+T
Sbjct: 329 GTVAAKKYDIEVWMPRENAYKEVVSCSNCTSYQAVRLNIRV-RDKSDFESKQHVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+RV+ AILE +Q E G V IP+ LR ++
Sbjct: 388 AIATSRVLRAILENNQQEDGSVLIPEVLRPYM 419
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DD YLIATSE PI A+++D E LP+R G+S CFR+E A
Sbjct: 225 DDAYLIATSEHPIGAMYQDEIFEEKDLPLRLAGISPCFRREIGA 268
>gi|297527069|ref|YP_003669093.1| seryl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
gi|297255985|gb|ADI32194.1| seryl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
Length = 459
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 142/230 (61%), Gaps = 21/230 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E P+ A+H +PE LP++Y G+S CFR+E G+ RD +GIFRVH
Sbjct: 243 KIEGEDLYLIATAEHPLAALHAWEDIPEEKLPLKYAGISPCFRKEAGAGNRDLKGIFRVH 302
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P D SW +++E+I N+E + LGI YR+VNI SG L AAKK DL
Sbjct: 303 QFHKVEQFVYAKPED--SWNIMEELISNAEHLFQGLGIPYRIVNIASGDLGAPAAKKYDL 360
Query: 135 EAWFPGSGAFRELVSCSNCLDYQS----RRLLVRYGQTKQKIY---ATACATTRVICAIL 187
EAW P G +RE+VSCSN D+Q+ RL+ R G K+ ++ +TA A+TR I AIL
Sbjct: 361 EAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVKEYLHTLNSTAIASTRTITAIL 420
Query: 188 ETHQTETG-VRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
E Q G V +P LRK++ K+APID K++K
Sbjct: 421 ENFQEPDGTVIVPKVLRKYLEV-----------FKSAPIDAIHPVKKEKN 459
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 110/181 (60%), Gaps = 16/181 (8%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV P D SW ++E+I N+E + LGI YR+VNI SG L
Sbjct: 294 DLKGIFRVHQFHKVEQFVYAKPED--SWNIMEELISNAEHLFQGLGIPYRIVNIASGDLG 351
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLEAW P G +RE+VSCSN +Q+ RL +R + K M + E++H LN+TA
Sbjct: 352 APAAKKYDLEAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVK--EYLHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
A+TR I AILE Q G V +P LRK++ K+APID K++K
Sbjct: 410 IASTRTITAILENFQEPDGTVIVPKVLRKYLEV-----------FKSAPIDAIHPVKKEK 458
Query: 482 Q 482
Sbjct: 459 N 459
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E P+ A+H +PE LP++Y G+S CFR+E AG
Sbjct: 243 KIEGEDLYLIATAEHPLAALHAWEDIPEEKLPLKYAGISPCFRKEAGAG 291
>gi|124028106|ref|YP_001013426.1| seryl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
gi|166222733|sp|A2BM70.1|SYS_HYPBU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|123978800|gb|ABM81081.1| Seryl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
Length = 460
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 131/200 (65%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E P+ ++ + + E LPI+ +G+S CFR+E G+ RD +GIFRVH
Sbjct: 244 KVEDEDLYLIATAEHPLAGLYYNEEIMEDELPIKLVGISPCFRKEAGAGNRDLKGIFRVH 303
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ESW +L+E+I+N+EE + LG+ YRVVN+VSG L AAKK DL
Sbjct: 304 QFHKVEQFVYAKP--EESWDILEELIRNAEELFQGLGLPYRVVNVVSGELGAPAAKKYDL 361
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAIL 187
E W P G +RE+VS SN D+QS RL +R + K + +TA A+TR I AIL
Sbjct: 362 EVWMPAQGKYREMVSASNTTDWQSYRLNIRLVRKKDMKREYVHTLNSTAIASTRTITAIL 421
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E Q G V IP LRK++
Sbjct: 422 ENFQEPDGTVVIPKVLRKYL 441
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV P +ESW L+E+I+N+EE + LG+ YRVVN+VSG L
Sbjct: 295 DLKGIFRVHQFHKVEQFVYAKP--EESWDILEELIRNAEELFQGLGLPYRVVNVVSGELG 352
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P G +RE+VS SN +QS RL +R + K M K E+VH LN+TA
Sbjct: 353 APAAKKYDLEVWMPAQGKYREMVSASNTTDWQSYRLNIRLVRKKDM--KREYVHTLNSTA 410
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I AILE Q G V IP LRK++
Sbjct: 411 IASTRTITAILENFQEPDGTVVIPKVLRKYL 441
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E P+ ++ + + E LPI+ +G+S CFR+E AG
Sbjct: 244 KVEDEDLYLIATAEHPLAGLYYNEEIMEDELPIKLVGISPCFRKEAGAG 292
>gi|88603748|ref|YP_503926.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1]
gi|121721452|sp|Q2FS27.1|SYS_METHJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|88189210|gb|ABD42207.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1]
Length = 425
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 135/201 (67%), Gaps = 11/201 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIATSE P+ A+++D E LP+R G+S CFR+E+GSHG DT+G+FRVH
Sbjct: 221 KIEDDDAYLIATSEHPMAAMYQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDTKGLFRVH 280
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P D+SW + +E+ +N+EE + L I YRVVNI +G + AAKK D+
Sbjct: 281 QFHKVEQFVYCHP--DDSWTIHEELRENAEEIFQKLEIPYRVVNICTGDIGTVAAKKYDI 338
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY---ATACATTRVICAI 186
EAW P +RE+VSCSNC YQ+ RL +R ++KQ ++ +TA AT+R + AI
Sbjct: 339 EAWMPRENEYREVVSCSNCTTYQAVRLNIRVRDKEDFESKQFVHTLNSTAIATSRAMRAI 398
Query: 187 LETHQTETG-VRIPDCLRKFV 206
LE +Q E G V IP LR ++
Sbjct: 399 LENNQQEDGSVVIPKVLRPYM 419
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 101/152 (66%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF KVEQFV P D+SW +E+ +N+EE + L I YRVVNI +G +
Sbjct: 271 LDTKGLFRVHQFHKVEQFVYCHP--DDSWTIHEELRENAEEIFQKLEIPYRVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+EAW P +RE+VSCSNC YQ+ RL +R + K +FVH LN+T
Sbjct: 329 GTVAAKKYDIEAWMPRENEYREVVSCSNCTTYQAVRLNIRVRDKEDFESK-QFVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R + AILE +Q E G V IP LR ++
Sbjct: 388 AIATSRAMRAILENNQQEDGSVVIPKVLRPYM 419
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 32/146 (21%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCA 590
K E DD YLIATSE P+ A+++D E LP+R G+S CFR+E + T
Sbjct: 221 KIEDDDAYLIATSEHPMAAMYQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDT------- 273
Query: 591 QREGLLSEATSEEVDQ------ADPFYAHCRLHADKLEDFSKFS-KILVCCVCLGE---- 639
+GL +V+Q D + H L + E F K V +C G+
Sbjct: 274 --KGLFRVHQFHKVEQFVYCHPDDSWTIHEELRENAEEIFQKLEIPYRVVNICTGDIGTV 331
Query: 640 ------------RSDDVNEIVECDSC 653
R ++ E+V C +C
Sbjct: 332 AAKKYDIEAWMPRENEYREVVSCSNC 357
>gi|407465514|ref|YP_006776396.1| seryl-tRNA synthetase [Candidatus Nitrosopumilus sp. AR2]
gi|407048702|gb|AFS83454.1| seryl-tRNA synthetase [Candidatus Nitrosopumilus sp. AR2]
Length = 421
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 131/200 (65%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D Y+I TSE + A+ L LP+RY GVS CFR+E G+HGRD +GIFRVH
Sbjct: 218 KVEDEDLYMIGTSEHAMAAMRSKEILEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVH 277
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+K+EQFV + P D SWK + M+ +EEFY +L I +RV+ + +G + +AK D+
Sbjct: 278 QFDKIEQFVFSRPED--SWKEHERMLSVAEEFYQNLEIPHRVMLLSTGDMGKVSAKTYDI 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAIL 187
EAW G A+RE+VSCSNCLDYQ+RRL +R+ Q + +T ATTR++ +I+
Sbjct: 336 EAWMAGQNAYREIVSCSNCLDYQARRLKIRFRDKTNEDTQYVHTLNSTLIATTRILVSIM 395
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E QT+ G +RIP L+ ++
Sbjct: 396 ENFQTKDGHIRIPSVLQNYM 415
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 105/151 (69%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF+K+EQFV + P D SWK + M+ +EEFY +L I +RV+ + +G +
Sbjct: 269 DQKGIFRVHQFDKIEQFVFSRPED--SWKEHERMLSVAEEFYQNLEIPHRVMLLSTGDMG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+EAW G A+RE+VSCSNCL YQ+RRL +R+ K NE ++VH LN+T
Sbjct: 327 KVSAKTYDIEAWMAGQNAYREIVSCSNCLDYQARRLKIRF--RDKTNEDTQYVHTLNSTL 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR++ +I+E QT+ G +RIP L+ ++
Sbjct: 385 IATTRILVSIMENFQTKDGHIRIPSVLQNYM 415
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D Y+I TSE + A+ L LP+RY GVS CFR+E A
Sbjct: 218 KVEDEDLYMIGTSEHAMAAMRSKEILEGKDLPLRYAGVSPCFRKEAGA 265
>gi|242399373|ref|YP_002994797.1| Seryl-tRNA synthetase [Thermococcus sibiricus MM 739]
gi|259516210|sp|C6A4A3.1|SYS_THESM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|242265766|gb|ACS90448.1| Seryl-tRNA synthetase [Thermococcus sibiricus MM 739]
Length = 455
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 131/196 (66%), Gaps = 10/196 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI TSE P+ +H + L +LPI Y GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KIEGEDLYLIPTSEHPLAGMHSNEILDGHNLPILYAGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ESW+ ++++QN+EE + L I YR+VNI +G L +AAAKK D+
Sbjct: 301 QFHKVEQFVYARP--EESWEWHEKLLQNAEEIFQALEIPYRIVNICTGDLGYAAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
EAW G FRE+VSCSNC ++Q+RRL +R+ + + +TA AT+R I AI+
Sbjct: 359 EAWMSAQGKFREVVSCSNCTEWQARRLNIRFRDKPNEKPRFVHTLNSTAIATSRAIVAII 418
Query: 188 ETHQTETG-VRIPDCL 202
E Q E G V+IP L
Sbjct: 419 ENFQEEDGTVKIPKAL 434
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 105/150 (70%), Gaps = 5/150 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV P +ESW+ ++++QN+EE + L I YR+VNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYARP--EESWEWHEKLLQNAEEIFQALEIPYRIVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAAKK D+EAW G FRE+VSCSNC +Q+RRL +R+ K NEK FVH LN
Sbjct: 347 DLGYAAAKKYDIEAWMSAQGKFREVVSCSNCTEWQARRLNIRF--RDKPNEKPRFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCL 448
+TA AT+R I AI+E Q E G V+IP L
Sbjct: 405 STAIATSRAIVAIIENFQEEDGTVKIPKAL 434
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI TSE P+ +H + L +LPI Y GVS CFR+E
Sbjct: 241 KIEGEDLYLIPTSEHPLAGMHSNEILDGHNLPILYAGVSPCFRKEA 286
>gi|161529019|ref|YP_001582845.1| seryl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
gi|238686942|sp|A9A4V3.1|SYS_NITMS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|160340320|gb|ABX13407.1| seryl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
Length = 421
Score = 192 bits (488), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 133/200 (66%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D Y+I TSE + A+H + LPIRY GVS CFR+E G+HGRD +GIFRVH
Sbjct: 218 KVEEEDLYMIGTSEHAMAAMHSKEIIEGKDLPIRYAGVSPCFRKEAGAHGRDQKGIFRVH 277
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+K+EQFV P D SWK ++M+ +EEFY L I +RV+ + +G + +AK D+
Sbjct: 278 QFDKIEQFVYARPED--SWKEHEKMLAVAEEFYQKLEIPHRVMLLSTGDMGKISAKTYDI 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQKIY---ATACATTRVICAIL 187
EAW G ++RE+VSCSNCLDYQ+RRL +R+ + Q I+ +T ATTRV+ +I+
Sbjct: 336 EAWMAGQNSYREIVSCSNCLDYQARRLKIRFRDKTNEDTQYIHTLNSTLVATTRVLVSIM 395
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E QT+ G ++IP L+ ++
Sbjct: 396 ENFQTKDGHIKIPQVLQSYM 415
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 104/151 (68%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF+K+EQFV P D SWK ++M+ +EEFY L I +RV+ + +G +
Sbjct: 269 DQKGIFRVHQFDKIEQFVYARPED--SWKEHEKMLAVAEEFYQKLEIPHRVMLLSTGDMG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+EAW G ++RE+VSCSNCL YQ+RRL +R+ K NE +++H LN+T
Sbjct: 327 KISAKTYDIEAWMAGQNSYREIVSCSNCLDYQARRLKIRF--RDKTNEDTQYIHTLNSTL 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTRV+ +I+E QT+ G ++IP L+ ++
Sbjct: 385 VATTRVLVSIMENFQTKDGHIKIPQVLQSYM 415
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D Y+I TSE + A+H + LPIRY GVS CFR+E A
Sbjct: 218 KVEEEDLYMIGTSEHAMAAMHSKEIIEGKDLPIRYAGVSPCFRKEAGA 265
>gi|315425105|dbj|BAJ46777.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
gi|315426870|dbj|BAJ48491.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
gi|315428030|dbj|BAJ49618.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
gi|343485588|dbj|BAJ51242.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
Length = 427
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 125/201 (62%), Gaps = 11/201 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H L LP+RY G+S CFR+E G+HG+DT+GIFRVH
Sbjct: 218 KVEGEDLYLIGTAEHPLAGLHAGEILDGRKLPLRYAGISPCFRKEAGAHGKDTKGIFRVH 277
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVEQF T P +SW + +I N+EE Y LG+ YRVVNI G L AAKK DL
Sbjct: 278 QFEKVEQFSFTKP--SQSWAEHEFLISNAEELYRSLGLPYRVVNICVGELGPVAAKKYDL 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--------QKIYATACATTRVICAI 186
E W P +RE+VSCSNC DYQ+ L +RY + + +T AT R I AI
Sbjct: 336 EVWMPAQNKYREVVSCSNCTDYQAVGLGIRYREAPHIEETDYVHTLNSTLIATERTIVAI 395
Query: 187 LETHQTETG-VRIPDCLRKFV 206
LE +QT G V IP+ L+ ++
Sbjct: 396 LENYQTRDGAVEIPEPLQHYL 416
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 99/151 (65%), Gaps = 4/151 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQFEKVEQF T P +SW + +I N+EE Y LG+ YRVVNI G L
Sbjct: 269 DTKGIFRVHQFEKVEQFSFTKP--SQSWAEHEFLISNAEELYRSLGLPYRVVNICVGELG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P +RE+VSCSNC YQ+ L +RY + + E+ ++VH LN+T
Sbjct: 327 PVAAKKYDLEVWMPAQNKYREVVSCSNCTDYQAVGLGIRYREAPHI-EETDYVHTLNSTL 385
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT R I AILE +QT G V IP+ L+ ++
Sbjct: 386 IATERTIVAILENYQTRDGAVEIPEPLQHYL 416
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLI T+E P+ +H L LP+RY G+S CFR+E A
Sbjct: 218 KVEGEDLYLIGTAEHPLAGLHAGEILDGRKLPLRYAGISPCFRKEAGA 265
>gi|386874608|ref|ZP_10116843.1| serine--tRNA ligase [Candidatus Nitrosopumilus salaria BD31]
gi|386807581|gb|EIJ66965.1| serine--tRNA ligase [Candidatus Nitrosopumilus salaria BD31]
Length = 421
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 129/196 (65%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D Y+I TSE + A+H + LP+RY G+S CFR+E G+HGRD +GIFRVHQF+K
Sbjct: 222 EDLYMIGTSEHAMAAMHSKEIIEGKDLPLRYAGISPCFRKEAGAHGRDQKGIFRVHQFDK 281
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV + P D S K ++M+ SEEFY L I YR++ + +G + +AK D+EAW
Sbjct: 282 IEQFVFSRPED--SRKEHEKMLAASEEFYQSLEIPYRIMLLSTGDMGKVSAKTYDIEAWM 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQ 191
G A+RE+VSCSNCLDYQ+RRL +RY Q + +T ATTR++ +I+E Q
Sbjct: 340 AGQNAYREIVSCSNCLDYQARRLKIRYRDKTNEDTQYLHTLNSTLIATTRILVSIMENFQ 399
Query: 192 TETG-VRIPDCLRKFV 206
T+ G ++IP L+ ++
Sbjct: 400 TKDGHIKIPHVLQSYM 415
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 104/151 (68%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF+K+EQFV + P D S K ++M+ SEEFY L I YR++ + +G +
Sbjct: 269 DQKGIFRVHQFDKIEQFVFSRPED--SRKEHEKMLAASEEFYQSLEIPYRIMLLSTGDMG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+EAW G A+RE+VSCSNCL YQ+RRL +RY K NE +++H LN+T
Sbjct: 327 KVSAKTYDIEAWMAGQNAYREIVSCSNCLDYQARRLKIRY--RDKTNEDTQYLHTLNSTL 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR++ +I+E QT+ G ++IP L+ ++
Sbjct: 385 IATTRILVSIMENFQTKDGHIKIPHVLQSYM 415
Score = 46.6 bits (109), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D Y+I TSE + A+H + LP+RY G+S CFR+E A
Sbjct: 222 EDLYMIGTSEHAMAAMHSKEIIEGKDLPLRYAGISPCFRKEAGA 265
>gi|389582246|dbj|GAB64801.1| seryl-tRNA synthetase [Plasmodium cynomolgi strain B]
Length = 544
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 114/154 (74%), Gaps = 2/154 (1%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +LIATSEQP+CA+H+D + LP++Y GVS+CFR+E G+HG+D RGI RVHQF+K
Sbjct: 294 DDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGAHGKDIRGILRVHQFDK 353
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +T P S K+ EM++ EEFY L I YR+V+IVSGALN+AAA K DLE +F
Sbjct: 354 IEQFCVTLPQ--TSNKVHKEMMKTCEEFYQSLNIPYRIVSIVSGALNNAAAIKYDLEGYF 411
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI 172
P S +RELVSCSNC DYQS L V+Y + KI
Sbjct: 412 PSSNQYRELVSCSNCTDYQSNNLNVKYVDSNVKI 445
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 104/210 (49%), Gaps = 53/210 (25%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI RVHQF+K+EQF +T P S K EM++ EEFY L I YR+V+IVSGALN
Sbjct: 341 DIRGILRVHQFDKIEQFCVTLPQ--TSNKVHKEMMKTCEEFYQSLNIPYRIVSIVSGALN 398
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY---------------GQTKK 407
+AAA K DLE +FP S +RELVSCSNC YQS L V+Y G K
Sbjct: 399 NAAAIKYDLEGYFPSSNQYRELVSCSNCTDYQSNNLNVKYVDSNVKISVSDVKGEGSKKG 458
Query: 408 MN-------------------------------EKIEFVHMLNATACATTRVICAILETH 436
N E VH+LN T A R +C +LE +
Sbjct: 459 SNQGDQKGDQKGDRNDYDEVGSDHEEFLKHFQTESRNNVHLLNGTMVAAQRFLCCLLENY 518
Query: 437 QTETGVRIPDCLRKFVPAVYVNEAGEIPFV 466
Q G+ +P+ LR Y+N IPF+
Sbjct: 519 QNGEGIVVPEKLRP-----YMNNVEFIPFI 543
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DD +LIATSEQP+CA+H+D + LP++Y GVS+CFR+E A
Sbjct: 294 DDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGA 337
>gi|341583098|ref|YP_004763590.1| seryl-tRNA synthetase [Thermococcus sp. 4557]
gi|340810756|gb|AEK73913.1| seryl-tRNA synthetase [Thermococcus sp. 4557]
Length = 455
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 135/199 (67%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YL+ T+E P+ +H + + LP+ Y GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLVPTAEHPLAGMHANEIIEGKDLPLLYAGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ESW+ +++I N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYARP--EESWEWHEKLIANAEEIFRELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC ++Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTEWQARRLNIRFRDKTHEKPKFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E QTE G V++P L K+
Sbjct: 419 ENFQTEEGVVKLPKALWKY 437
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 108/153 (70%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV P +ESW+ +++I N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYARP--EESWEWHEKLIANAEEIFRELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +R+ K +EK +FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRF--RDKTHEKPKFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE QTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENFQTEEGVVKLPKALWKY 437
Score = 43.9 bits (102), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YL+ T+E P+ +H + + LP+ Y GVS CFR+E
Sbjct: 241 KVEGEDLYLVPTAEHPLAGMHANEIIEGKDLPLLYAGVSPCFRKEA 286
>gi|374854902|dbj|BAL57772.1| seryl-tRNA synthetase [uncultured crenarchaeote]
Length = 288
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 125/201 (62%), Gaps = 11/201 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H L LP+RY G+S CFR+E G+HG+DT+GIFRVH
Sbjct: 79 KVEGEDLYLIGTAEHPLAGLHAGEILDGRKLPLRYAGISPCFRKEAGAHGKDTKGIFRVH 138
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVEQF T P +SW + +I N+EE Y LG+ YRVVNI G L AAKK DL
Sbjct: 139 QFEKVEQFSFTKP--SQSWAEHEFLISNAEELYRSLGLPYRVVNICVGELGPVAAKKYDL 196
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--------QKIYATACATTRVICAI 186
E W P +RE+VSCSNC DYQ+ L +RY + + +T AT R I AI
Sbjct: 197 EVWMPAQNKYREVVSCSNCTDYQAVGLGIRYREAPHIEETDYVHTLNSTLIATERTIVAI 256
Query: 187 LETHQTETG-VRIPDCLRKFV 206
LE +QT G V IP+ L+ ++
Sbjct: 257 LENYQTRDGAVEIPEPLQHYL 277
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 99/151 (65%), Gaps = 4/151 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQFEKVEQF T P +SW + +I N+EE Y LG+ YRVVNI G L
Sbjct: 130 DTKGIFRVHQFEKVEQFSFTKP--SQSWAEHEFLISNAEELYRSLGLPYRVVNICVGELG 187
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P +RE+VSCSNC YQ+ L +RY + + E+ ++VH LN+T
Sbjct: 188 PVAAKKYDLEVWMPAQNKYREVVSCSNCTDYQAVGLGIRYREAPHI-EETDYVHTLNSTL 246
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT R I AILE +QT G V IP+ L+ ++
Sbjct: 247 IATERTIVAILENYQTRDGAVEIPEPLQHYL 277
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLI T+E P+ +H L LP+RY G+S CFR+E A
Sbjct: 79 KVEGEDLYLIGTAEHPLAGLHAGEILDGRKLPLRYAGISPCFRKEAGA 126
>gi|375083100|ref|ZP_09730133.1| seryl-tRNA synthetase [Thermococcus litoralis DSM 5473]
gi|374742228|gb|EHR78633.1| seryl-tRNA synthetase [Thermococcus litoralis DSM 5473]
Length = 455
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 130/196 (66%), Gaps = 10/196 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI TSE P+ +H + L LP+ Y GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTSEHPLAGLHANEILDGNDLPLLYAGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ ++++QN+EE + L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKLLQNAEEIFQALEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
EAW G FRE+VSCSNC ++Q+RRL +R+ + + +TA AT+R I AI+
Sbjct: 359 EAWMSAQGKFREVVSCSNCTEWQARRLNIRFRDKPNEKPRFVHTLNSTAIATSRAIVAII 418
Query: 188 ETHQTETG-VRIPDCL 202
E Q E G V+IP L
Sbjct: 419 ENFQEEDGTVKIPKVL 434
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 105/150 (70%), Gaps = 5/150 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ ++++QN+EE + L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKLLQNAEEIFQALEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G FRE+VSCSNC +Q+RRL +R+ K NEK FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMSAQGKFREVVSCSNCTEWQARRLNIRF--RDKPNEKPRFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCL 448
+TA AT+R I AI+E Q E G V+IP L
Sbjct: 405 STAIATSRAIVAIIENFQEEDGTVKIPKVL 434
Score = 46.2 bits (108), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI TSE P+ +H + L LP+ Y GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTSEHPLAGLHANEILDGNDLPLLYAGVSPCFRKEA 286
>gi|154150976|ref|YP_001404594.1| seryl-tRNA synthetase [Methanoregula boonei 6A8]
gi|166222741|sp|A7I890.1|SYS_METB6 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|153999528|gb|ABS55951.1| seryl-tRNA synthetase [Methanoregula boonei 6A8]
Length = 425
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 132/197 (67%), Gaps = 11/197 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLIATSE PI A+++D E LP+R G+S CFR+E+G+HG DT+G+FRVHQF K
Sbjct: 225 DDTYLIATSEHPIAAMYQDEIFEEKDLPLRLCGLSPCFRREIGAHGLDTKGLFRVHQFTK 284
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV P + SW++ +E++ N+EE + LG+ Y VVNI +G + AAKK D+EAW
Sbjct: 285 IEQFVFCRPEN--SWQIHEELLANAEEVFTKLGLPYHVVNICTGDIGTVAAKKYDIEAWM 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY---ATACATTRVICAILETH 190
P A++E+VSCSNC YQ+ L +R +TK ++ +TA AT+R + ILE +
Sbjct: 343 PRENAYKEVVSCSNCTSYQAASLNIRVRDKENFETKHLVHTLNSTAIATSRALRCILENY 402
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V IPD LR+++
Sbjct: 403 QNRDGSVTIPDVLRQYM 419
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 102/152 (67%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF K+EQFV P + SW+ +E++ N+EE + LG+ Y VVNI +G +
Sbjct: 271 LDTKGLFRVHQFTKIEQFVFCRPEN--SWQIHEELLANAEEVFTKLGLPYHVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+EAW P A++E+VSCSNC +YQ+ L +R + K+ E VH LN+T
Sbjct: 329 GTVAAKKYDIEAWMPRENAYKEVVSCSNCTSYQAASLNIRV-RDKENFETKHLVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R + ILE +Q G V IPD LR+++
Sbjct: 388 AIATSRALRCILENYQNRDGSVTIPDVLRQYM 419
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 32/142 (22%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREG 594
DD YLIATSE PI A+++D E LP+R G+S CFR+E A T +G
Sbjct: 225 DDTYLIATSEHPIAAMYQDEIFEEKDLPLRLCGLSPCFRREIGAHGLDT---------KG 275
Query: 595 LLSEATSEEVDQ------ADPFYAHCRLHADKLEDFSKFS-KILVCCVCLGE-------- 639
L +++Q + + H L A+ E F+K V +C G+
Sbjct: 276 LFRVHQFTKIEQFVFCRPENSWQIHEELLANAEEVFTKLGLPYHVVNICTGDIGTVAAKK 335
Query: 640 --------RSDDVNEIVECDSC 653
R + E+V C +C
Sbjct: 336 YDIEAWMPRENAYKEVVSCSNC 357
>gi|146304700|ref|YP_001192016.1| seryl-tRNA synthetase [Metallosphaera sedula DSM 5348]
gi|172046949|sp|A4YI40.1|SYS_METS5 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|145702950|gb|ABP96092.1| seryl-tRNA synthetase [Metallosphaera sedula DSM 5348]
Length = 455
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 129/200 (64%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E PI A++ + LP+RY+G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIEGEDLYLIATAEHPIAALYFKEEIEAERLPLRYVGLSPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ + P D SWK +E++ N+E+ + L + YRVVNI SG L AAKK DL
Sbjct: 301 QFNKVEQFIFSLPED--SWKFHEELLGNAEQIFQGLELPYRVVNIASGDLGACAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +R+ K+ + +TA ATTR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRFVDRKKNRKGFVHTLNSTAVATTRAITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V IP LR ++
Sbjct: 419 ENNQLEDGSVVIPKVLRPYL 438
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 103/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ + P D SWK +E++ N+E+ + L + YRVVNI SG
Sbjct: 289 ANKDLKGIFRVHQFNKVEQFIFSLPED--SWKFHEELLGNAEQIFQGLELPYRVVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +R+ KK N K FVH LN
Sbjct: 347 DLGACAAKKYDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRFVDRKK-NRK-GFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA ATTR I AILE +Q E G V IP LR ++
Sbjct: 405 STAVATTRAITAILENNQLEDGSVVIPKVLRPYL 438
Score = 47.0 bits (110), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E PI A++ + LP+RY+G+S FR+E A
Sbjct: 241 KIEGEDLYLIATAEHPIAALYFKEEIEAERLPLRYVGLSPAFRKEAGAA 289
>gi|167044044|gb|ABZ08729.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
[uncultured marine crenarchaeote HF4000_APKG4H17]
Length = 419
Score = 189 bits (480), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 127/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E D YLI TSE + +++ D L SLP+RY +S CFR+E G+HG+D +GIFRVH
Sbjct: 217 KIEDQDLYLIGTSEHAMVSMYADEILDGNSLPVRYAAISPCFRKEAGAHGKDQKGIFRVH 276
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV + P D SWK + MI +EEF+ L I ++VV + S + +AK DL
Sbjct: 277 QFEKIEQFVFSKPED--SWKEHENMIGVTEEFFQKLEIPHKVVLLSSSDMGKISAKTYDL 334
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAIL 187
E W G A+RE VSCSNCLDYQSRRL +R+ Q + +T AT R + AI+
Sbjct: 335 EVWMAGQNAYREAVSCSNCLDYQSRRLKIRFRDKTNEDTQYAHTLNSTLVATERTMVAII 394
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E QT+ G V IP+ L+K++
Sbjct: 395 ENFQTKDGHVNIPNVLQKYM 414
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 99/151 (65%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQFEK+EQFV + P D SWK + MI +EEF+ L I ++VV + S +
Sbjct: 268 DQKGIFRVHQFEKIEQFVFSKPED--SWKEHENMIGVTEEFFQKLEIPHKVVLLSSSDMG 325
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK DLE W G A+RE VSCSNCL YQSRRL +R+ K NE ++ H LN+T
Sbjct: 326 KISAKTYDLEVWMAGQNAYREAVSCSNCLDYQSRRLKIRF--RDKTNEDTQYAHTLNSTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT R + AI+E QT+ G V IP+ L+K++
Sbjct: 384 VATERTMVAIIENFQTKDGHVNIPNVLQKYM 414
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E D YLI TSE + +++ D L SLP+RY +S CFR+E A
Sbjct: 217 KIEDQDLYLIGTSEHAMVSMYADEILDGNSLPVRYAAISPCFRKEAGA 264
>gi|340345509|ref|ZP_08668641.1| Seryl-tRNA synthetase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520650|gb|EGP94373.1| Seryl-tRNA synthetase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 420
Score = 189 bits (480), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 128/196 (65%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D Y+I TSE + A+ + + LP+R+ GVS CFR+E G+HGRD +GIFRVHQF+K
Sbjct: 222 EDLYMIGTSEHAMAAMRSNEIIEGKDLPLRFAGVSPCFRKEAGAHGRDQKGIFRVHQFDK 281
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV P +ESWK + M+ +EEFY L I Y+V+ + SG + +AK D+EAW
Sbjct: 282 IEQFVFARP--EESWKEHERMLSVAEEFYQKLEIPYKVMLLSSGDMGKVSAKTYDIEAWM 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQ 191
G A+RE+VSCSNCLDYQ+RRL +R+ Q + +T AT+RV+ +I+E Q
Sbjct: 340 AGQNAYREIVSCSNCLDYQARRLKIRFRDKTNEETQYLHTLNSTLVATSRVLVSIMENFQ 399
Query: 192 TETG-VRIPDCLRKFV 206
T G + IP L+K++
Sbjct: 400 TNDGHIVIPKVLQKYM 415
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 104/151 (68%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF+K+EQFV P +ESWK + M+ +EEFY L I Y+V+ + SG +
Sbjct: 269 DQKGIFRVHQFDKIEQFVFARP--EESWKEHERMLSVAEEFYQKLEIPYKVMLLSSGDMG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+EAW G A+RE+VSCSNCL YQ+RRL +R+ K NE+ +++H LN+T
Sbjct: 327 KVSAKTYDIEAWMAGQNAYREIVSCSNCLDYQARRLKIRF--RDKTNEETQYLHTLNSTL 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT+RV+ +I+E QT G + IP L+K++
Sbjct: 385 VATSRVLVSIMENFQTNDGHIVIPKVLQKYM 415
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+D Y+I TSE + A+ + + LP+R+ GVS CFR+E A
Sbjct: 222 EDLYMIGTSEHAMAAMRSNEIIEGKDLPLRFAGVSPCFRKEAGA 265
>gi|347524046|ref|YP_004781616.1| seryl-tRNA synthetase [Pyrolobus fumarii 1A]
gi|343460928|gb|AEM39364.1| seryl-tRNA synthetase [Pyrolobus fumarii 1A]
Length = 463
Score = 189 bits (480), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 133/199 (66%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE P+ A++ + + E LPI+ +GVS CFR+E G+ RD +GIFRVH
Sbjct: 245 KIEDEDLYLIATSEHPLAALYMNEEIREDDLPIKLVGVSPCFRKEAGAGNRDLKGIFRVH 304
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ES ++L+E+I+N+EE + LGI YRVV I + L AAKK DL
Sbjct: 305 QFHKVEQFVFAKP--EESSQILEELIRNAEELFKGLGIPYRVVAICAQELGAPAAKKYDL 362
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIY---ATACATTRVICAILE 188
EAW P G +RE+VS SNC D+Q+ RL LVR K+ ++ +TA A+TR I AILE
Sbjct: 363 EAWMPAQGRYREMVSASNCTDWQAYRLNIRLVRKNMEKEYVHTLNSTAIASTRTITAILE 422
Query: 189 THQTETG-VRIPDCLRKFV 206
Q G + IP LRK++
Sbjct: 423 NFQEPDGTIVIPKVLRKYL 441
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 101/151 (66%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV P +ES + L+E+I+N+EE + LGI YRVV I + L
Sbjct: 296 DLKGIFRVHQFHKVEQFVFAKP--EESSQILEELIRNAEELFKGLGIPYRVVAICAQELG 353
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLEAW P G +RE+VS SNC +Q+ RL +R +K EK E+VH LN+TA
Sbjct: 354 APAAKKYDLEAWMPAQGRYREMVSASNCTDWQAYRLNIRL--VRKNMEK-EYVHTLNSTA 410
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I AILE Q G + IP LRK++
Sbjct: 411 IASTRTITAILENFQEPDGTIVIPKVLRKYL 441
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIATSE P+ A++ + + E LPI+ +GVS CFR+E AG
Sbjct: 245 KIEDEDLYLIATSEHPLAALYMNEEIREDDLPIKLVGVSPCFRKEAGAG 293
>gi|395645605|ref|ZP_10433465.1| Seryl-tRNA synthetase [Methanofollis liminatans DSM 4140]
gi|395442345|gb|EJG07102.1| Seryl-tRNA synthetase [Methanofollis liminatans DSM 4140]
Length = 425
Score = 189 bits (479), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 130/197 (65%), Gaps = 11/197 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIATSE P+ A+++D E LP+++ G+S CFR+E+GSHG DT+G+FRVHQF K
Sbjct: 225 EDAYLIATSEHPMAAMYKDEIFEEKDLPLKFAGISPCFRKEIGSHGIDTKGLFRVHQFNK 284
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF+ P +ESW +E++ N+E + LG+ Y VVNI +G + AAKK D+E W
Sbjct: 285 IEQFIFCRP--EESWAFHEELLANAEAIFQGLGLPYHVVNICTGDIGTVAAKKYDIEVWM 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIY-----ATACATTRVICAILETH 190
P +RE VSCSNC YQ+ RL ++ + K+K Y +TA AT+R I AILE +
Sbjct: 343 PRENMYREAVSCSNCTSYQAVRLNIKVRDPAEFKEKQYVHTLNSTAIATSRAIRAILENN 402
Query: 191 QTETG-VRIPDCLRKFV 206
Q E G V IP+ LR ++
Sbjct: 403 QQEDGSVVIPEALRPYM 419
Score = 146 bits (368), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 101/152 (66%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
+DT+G+FRVHQF K+EQF+ P +ESW +E++ N+E + LG+ Y VVNI +G +
Sbjct: 271 IDTKGLFRVHQFNKIEQFIFCRP--EESWAFHEELLANAEAIFQGLGLPYHVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+E W P +RE VSCSNC +YQ+ RL ++ + EK ++VH LN+T
Sbjct: 329 GTVAAKKYDIEVWMPRENMYREAVSCSNCTSYQAVRLNIKVRDPAEFKEK-QYVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R I AILE +Q E G V IP+ LR ++
Sbjct: 388 AIATSRAIRAILENNQQEDGSVVIPEALRPYM 419
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D YLIATSE P+ A+++D E LP+++ G+S CFR+E
Sbjct: 225 EDAYLIATSEHPMAAMYKDEIFEEKDLPLKFAGISPCFRKEI 266
>gi|355571231|ref|ZP_09042483.1| Seryl-tRNA synthetase [Methanolinea tarda NOBI-1]
gi|354825619|gb|EHF09841.1| Seryl-tRNA synthetase [Methanolinea tarda NOBI-1]
Length = 425
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 135/201 (67%), Gaps = 11/201 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIATSE P+CA+++D E LP+R GVS CFR+E+GSHG DT+G+FRVH
Sbjct: 221 KIEDDDAYLIATSEHPLCAMYQDEIFEERDLPLRLCGVSPCFRREIGSHGLDTKGLFRVH 280
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ESW + ++++ ++EE Y LG+ YRVV+I +G + AAKK D+
Sbjct: 281 QFHKVEQFVFCRP--EESWDIHEQLLAHAEEIYTLLGLPYRVVSICTGDIGTVAAKKYDI 338
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY---ATACATTRVICAI 186
E W P +RE+VSCSNC YQ+ RL +R ++K+ ++ +TA AT+R I AI
Sbjct: 339 EVWMPREEKYREVVSCSNCTSYQAVRLRIRVRDPRNFESKRYVHTLNSTAVATSRTIRAI 398
Query: 187 LETHQTETG-VRIPDCLRKFV 206
LE +Q G V +P L+ ++
Sbjct: 399 LENYQEADGRVAVPRVLQPYM 419
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF KVEQFV P +ESW ++++ ++EE Y LG+ YRVV+I +G +
Sbjct: 271 LDTKGLFRVHQFHKVEQFVFCRP--EESWDIHEQLLAHAEEIYTLLGLPYRVVSICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+E W P +RE+VSCSNC +YQ+ RL +R + K +VH LN+T
Sbjct: 329 GTVAAKKYDIEVWMPREEKYREVVSCSNCTSYQAVRLRIRVRDPRNFESK-RYVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R I AILE +Q G V +P L+ ++
Sbjct: 388 AVATSRTIRAILENYQEADGRVAVPRVLQPYM 419
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E DD YLIATSE P+CA+++D E LP+R GVS CFR+E + G+ R +
Sbjct: 221 KIEDDDAYLIATSEHPLCAMYQDEIFEERDLPLRLCGVSPCFRREIGSHGLDTKGLFRVH 280
Query: 585 -FH 586
FH
Sbjct: 281 QFH 283
>gi|15897519|ref|NP_342124.1| seryl-tRNA synthetase [Sulfolobus solfataricus P2]
gi|284174838|ref|ZP_06388807.1| seryl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|384434126|ref|YP_005643484.1| seryl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|12643258|sp|O33780.2|SYS_SULSO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|6015871|emb|CAB57698.1| seryl-trna synthetase [Sulfolobus solfataricus P2]
gi|13813768|gb|AAK40914.1| Seryl-tRNA synthetase (serS) [Sulfolobus solfataricus P2]
gi|261602280|gb|ACX91883.1| seryl-tRNA synthetase [Sulfolobus solfataricus 98/2]
Length = 457
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 127/202 (62%), Gaps = 10/202 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E PI A+ + + LP+++ G+S FR+E + +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHPIAAMFFKEEIEKDKLPLKFAGISPAFRKEASAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHSELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNRRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFVPA 208
E +Q E G V +P LRK++ A
Sbjct: 419 ENYQREDGVVEVPKVLRKYLEA 440
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 103/156 (66%), Gaps = 5/156 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHSELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N + +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNRRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
+TA A+TR I AILE +Q E G V +P LRK++ A
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYLEA 440
Score = 43.5 bits (101), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E PI A+ + + LP+++ G+S FR+E A
Sbjct: 241 KIENEDLYLIATAEHPIAAMFFKEEIEKDKLPLKFAGISPAFRKEASAA 289
>gi|320100908|ref|YP_004176500.1| seryl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
gi|319753260|gb|ADV65018.1| seryl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
Length = 459
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 134/200 (67%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E + A+H +PE LP++Y+GVS CFR+E G+ RD +GIFRVH
Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAGNRDLKGIFRVH 302
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQ+V P +ESW +++E+I N+EE + L + YR+VNI SG L AAKK DL
Sbjct: 303 QFHKVEQYVYAKP--EESWSLMEELIGNAEELFRGLELPYRIVNIASGDLGAPAAKKYDL 360
Query: 135 EAWFPGSGAFRELVSCSNCLDYQS----RRLLVRYGQTKQKIY---ATACATTRVICAIL 187
E W P G FRE+VSCSN D+QS RL+ R G K+ ++ +TA A+TR I +IL
Sbjct: 361 ETWMPAQGLFREMVSCSNTTDWQSFRLKTRLIRRRGMIKEYVHTLNSTAIASTRAITSIL 420
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E HQ E G V IP LRK++
Sbjct: 421 ENHQNEDGTVTIPKALRKYL 440
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQ+V P +ESW ++E+I N+EE + L + YR+VNI SG L
Sbjct: 294 DLKGIFRVHQFHKVEQYVYAKP--EESWSLMEELIGNAEELFRGLELPYRIVNIASGDLG 351
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P G FRE+VSCSN +QS RL R + + M + E+VH LN+TA
Sbjct: 352 APAAKKYDLETWMPAQGLFREMVSCSNTTDWQSFRLKTRLIRRRGMIK--EYVHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I +ILE HQ E G V IP LRK++
Sbjct: 410 IASTRAITSILENHQNEDGTVTIPKALRKYL 440
Score = 42.0 bits (97), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E + A+H +PE LP++Y+GVS CFR+E AG
Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAG 291
>gi|390938340|ref|YP_006402078.1| seryl-tRNA synthetase [Desulfurococcus fermentans DSM 16532]
gi|390191447|gb|AFL66503.1| seryl-tRNA synthetase [Desulfurococcus fermentans DSM 16532]
Length = 460
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 134/200 (67%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E + A+H +PE LP++Y+GVS CFR+E G+ RD +GIFRVH
Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAGNRDLKGIFRVH 302
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQ+V P +ESW +++E+I N+EE + L + YRVVNI SG L AAKK DL
Sbjct: 303 QFHKVEQYVYAKP--EESWALMEELIGNAEELFKGLELPYRVVNIASGDLGAPAAKKYDL 360
Query: 135 EAWFPGSGAFRELVSCSNCLDYQS----RRLLVRYGQTKQKIY---ATACATTRVICAIL 187
E W P G FRE+VSCSN D+QS RL+ R G K+ ++ +TA A+TR I +IL
Sbjct: 361 ETWMPAQGLFREMVSCSNTTDWQSYRLKTRLVRRKGMVKEYVHTLNSTAIASTRTITSIL 420
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E HQ E G V IP LRK++
Sbjct: 421 ENHQNEDGTVTIPRVLRKYL 440
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQ+V P +ESW ++E+I N+EE + L + YRVVNI SG L
Sbjct: 294 DLKGIFRVHQFHKVEQYVYAKP--EESWALMEELIGNAEELFKGLELPYRVVNIASGDLG 351
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P G FRE+VSCSN +QS RL R + K M + E+VH LN+TA
Sbjct: 352 APAAKKYDLETWMPAQGLFREMVSCSNTTDWQSYRLKTRLVRRKGMVK--EYVHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I +ILE HQ E G V IP LRK++
Sbjct: 410 IASTRTITSILENHQNEDGTVTIPRVLRKYL 440
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E + A+H +PE LP++Y+GVS CFR+E AG
Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAG 291
>gi|167043861|gb|ABZ08550.1| putative tRNA synthetase class II core domain (G, H, P, S and T)
[uncultured marine crenarchaeote HF4000_APKG3E18]
Length = 419
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 127/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E D YLI TSE + +++ D L SLP RY +S CFR+E G+HG+D +GIFRVH
Sbjct: 217 KIEDQDLYLIGTSEHAMVSMYADEILDGNSLPARYSAISPCFRKEAGAHGKDQKGIFRVH 276
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEK+EQFV + P D SW + MI +EEF+ L I ++VV + SG + +AK DL
Sbjct: 277 QFEKIEQFVFSKPED--SWNEHENMIAITEEFFQKLEIPHKVVLLSSGDMGKISAKTYDL 334
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W G A+RE+VSCSNCLDYQSRRL +R+ + + +T AT R + AIL
Sbjct: 335 EVWMAGQNAYREVVSCSNCLDYQSRRLKIRFRDKTNEDTKYIHTLNSTLVATERTMVAIL 394
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E QT+ G V IP+ L+K++
Sbjct: 395 ENLQTKDGHVNIPNVLQKYM 414
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQFEK+EQFV + P D SW + MI +EEF+ L I ++VV + SG +
Sbjct: 268 DQKGIFRVHQFEKIEQFVFSKPED--SWNEHENMIAITEEFFQKLEIPHKVVLLSSGDMG 325
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK DLE W G A+RE+VSCSNCL YQSRRL +R+ K NE +++H LN+T
Sbjct: 326 KISAKTYDLEVWMAGQNAYREVVSCSNCLDYQSRRLKIRF--RDKTNEDTKYIHTLNSTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT R + AILE QT+ G V IP+ L+K++
Sbjct: 384 VATERTMVAILENLQTKDGHVNIPNVLQKYM 414
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E D YLI TSE + +++ D L SLP RY +S CFR+E A
Sbjct: 217 KIEDQDLYLIGTSEHAMVSMYADEILDGNSLPARYSAISPCFRKEAGA 264
>gi|330834196|ref|YP_004408924.1| seryl-tRNA synthetase [Metallosphaera cuprina Ar-4]
gi|329566335|gb|AEB94440.1| seryl-tRNA synthetase [Metallosphaera cuprina Ar-4]
Length = 441
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 128/200 (64%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E PI ++ + LP++++G+S FR+E G+ +D +GIFRVH
Sbjct: 227 KIEGEDLYLIATAEHPIASLFFKEEIEAERLPLKFVGISPAFRKEAGAANKDLKGIFRVH 286
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ + P D SWK DE++ N+E+ + L + YRVVNI SG L AAKK DL
Sbjct: 287 QFNKVEQFIFSLPED--SWKFHDELLYNAEQIFQGLELPYRVVNIASGDLGACAAKKYDL 344
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +R+ K+ + +TA ATTR I AIL
Sbjct: 345 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRFVDRKKNRKGYVHTLNSTAVATTRAITAIL 404
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V IP LR ++
Sbjct: 405 ENNQLEDGSVVIPRVLRSYL 424
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 103/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ + P D SWK DE++ N+E+ + L + YRVVNI SG
Sbjct: 275 ANKDLKGIFRVHQFNKVEQFIFSLPED--SWKFHDELLYNAEQIFQGLELPYRVVNIASG 332
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +R+ KK N K +VH LN
Sbjct: 333 DLGACAAKKYDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRFVDRKK-NRK-GYVHTLN 390
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA ATTR I AILE +Q E G V IP LR ++
Sbjct: 391 STAVATTRAITAILENNQLEDGSVVIPRVLRSYL 424
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E PI ++ + LP++++G+S FR+E A
Sbjct: 227 KIEGEDLYLIATAEHPIASLFFKEEIEAERLPLKFVGISPAFRKEAGAA 275
>gi|397780030|ref|YP_006544503.1| seryl-tRNA synthetase [Methanoculleus bourgensis MS2]
gi|396938532|emb|CCJ35787.1| seryl-tRNA synthetase [Methanoculleus bourgensis MS2]
Length = 439
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 133/204 (65%), Gaps = 17/204 (8%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D+YLIATSE P+ A++ D E LP+R G+S CFR+E+G+HG DT+G+FRVH
Sbjct: 235 KIESEDEYLIATSEHPMAAMYSDEIFEEKDLPLRLAGLSPCFRREIGAHGIDTKGLFRVH 294
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ +P ++SW + +E++ N+EE + LG+ YR+V+I +G + AAKK DL
Sbjct: 295 QFHKVEQFIYATP--EQSWDLHEELLANAEEVFRQLGLPYRIVSICTGDIGTVAAKKYDL 352
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLV-----------RYGQTKQKIYATACATTRVI 183
E W P +RE VSCSNC YQ+ RL + RY T + +TA AT+R I
Sbjct: 353 EVWMPREERYREAVSCSNCTAYQAVRLNIKVRDPTEFTEKRYVHT---LNSTAIATSRAI 409
Query: 184 CAILETHQTETG-VRIPDCLRKFV 206
AILE +Q E G V IP+ LR ++
Sbjct: 410 RAILENYQNEDGSVTIPEPLRPYL 433
Score = 149 bits (377), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 103/152 (67%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
+DT+G+FRVHQF KVEQF+ +P ++SW +E++ N+EE + LG+ YR+V+I +G +
Sbjct: 285 IDTKGLFRVHQFHKVEQFIYATP--EQSWDLHEELLANAEEVFRQLGLPYRIVSICTGDI 342
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK DLE W P +RE VSCSNC AYQ+ RL ++ + EK +VH LN+T
Sbjct: 343 GTVAAKKYDLEVWMPREERYREAVSCSNCTAYQAVRLNIKVRDPTEFTEK-RYVHTLNST 401
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R I AILE +Q E G V IP+ LR ++
Sbjct: 402 AIATSRAIRAILENYQNEDGSVTIPEPLRPYL 433
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D+YLIATSE P+ A++ D E LP+R G+S CFR+E A G+ R +
Sbjct: 235 KIESEDEYLIATSEHPMAAMYSDEIFEEKDLPLRLAGLSPCFRREIGAHGIDTKGLFRVH 294
Query: 585 -FH 586
FH
Sbjct: 295 QFH 297
>gi|385773492|ref|YP_005646058.1| seryl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
gi|385776117|ref|YP_005648685.1| seryl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323474865|gb|ADX85471.1| seryl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323477606|gb|ADX82844.1| seryl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
Length = 457
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
>gi|229579320|ref|YP_002837718.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|259516183|sp|C3NEQ7.1|SYS_SULIY RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|228010034|gb|ACP45796.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
Length = 457
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
>gi|227830507|ref|YP_002832287.1| seryl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|229581920|ref|YP_002840319.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|229585068|ref|YP_002843570.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|238619970|ref|YP_002914796.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|284998002|ref|YP_003419769.1| seryl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
gi|259511682|sp|C3N6A0.1|SYS_SULIA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|259511683|sp|C4KHR4.1|SYS_SULIK RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|259511684|sp|C3MQH9.1|SYS_SULIL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|259516136|sp|C3NGY7.1|SYS_SULIN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|227456955|gb|ACP35642.1| seryl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|228012636|gb|ACP48397.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|228020118|gb|ACP55525.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|238381040|gb|ACR42128.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|284445897|gb|ADB87399.1| seryl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
Length = 457
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
>gi|147921639|ref|YP_684544.1| seryl-tRNA synthetase [Methanocella arvoryzae MRE50]
gi|121677008|sp|Q0W8S5.1|SYS_UNCMA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|110619940|emb|CAJ35218.1| seryl-tRNA synthetase [Methanocella arvoryzae MRE50]
Length = 425
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 129/201 (64%), Gaps = 11/201 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIATSE PI A+++ E LP+R G+S CFR+E+G+HG DT+G+FRVH
Sbjct: 221 KIEGDDMYLIATSEHPIGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVH 280
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQFV P D SWK+ +E++ N+E + LG+ Y VVNI +G + AAKK D+
Sbjct: 281 QFHKIEQFVFCKPED--SWKIHEEILANAEAVFQQLGLPYHVVNICTGDIGTVAAKKYDI 338
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--------QKIYATACATTRVICAI 186
E W P ++E+VSCSNC YQ+ RL ++ K + +TA AT+R + AI
Sbjct: 339 EVWMPRENTYKEVVSCSNCTAYQATRLNIKVRDPKDFESKRYVHTLNSTAIATSRAMRAI 398
Query: 187 LETHQTETG-VRIPDCLRKFV 206
LE +Q + G V IP+ LR ++
Sbjct: 399 LENNQQKDGSVLIPEVLRPYM 419
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF K+EQFV P D SWK +E++ N+E + LG+ Y VVNI +G +
Sbjct: 271 LDTKGLFRVHQFHKIEQFVFCKPED--SWKIHEEILANAEAVFQQLGLPYHVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+E W P ++E+VSCSNC AYQ+ RL ++ K K +VH LN+T
Sbjct: 329 GTVAAKKYDIEVWMPRENTYKEVVSCSNCTAYQATRLNIKVRDPKDFESK-RYVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R + AILE +Q + G V IP+ LR ++
Sbjct: 388 AIATSRAMRAILENNQQKDGSVLIPEVLRPYM 419
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E DD YLIATSE PI A+++ E LP+R G+S CFR+E A G+ R +
Sbjct: 221 KIEGDDMYLIATSEHPIGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVH 280
Query: 585 -FH 586
FH
Sbjct: 281 QFH 283
>gi|227827797|ref|YP_002829577.1| seryl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|259512027|sp|C3MW57.1|SYS_SULIM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|227459593|gb|ACP38279.1| seryl-tRNA synthetase [Sulfolobus islandicus M.14.25]
Length = 457
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E + A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSVAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
>gi|322699748|gb|EFY91507.1| putative serine-tRNA ligase, cytosolic [Metarhizium acridum CQMa
102]
Length = 431
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 128/213 (60%), Gaps = 45/213 (21%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+DKYLIATSEQPI A H D WL LPI+ K
Sbjct: 234 NDKYLIATSEQPISAFHADEWLIPKDLPIK----------------------------AK 265
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF+LT P ++SW +MI SEEFY L + Y++V+IVSGALN+AA+KKLDLEAWF
Sbjct: 266 IEQFLLTDP--EKSWDAFHDMIGISEEFYKSLELPYQIVSIVSGALNNAASKKLDLEAWF 323
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAILET 189
P G ++ELVSCSNC DYQSR L +R+G Q + +T CATTR +C ILE
Sbjct: 324 PFQGEYKELVSCSNCTDYQSRALEIRFGSKMQTDVKKKYVHCLNSTLCATTRTMCCILEN 383
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGE-IPFVK 221
+QTE G+R+P+ LRK++P A E IPF K
Sbjct: 384 YQTEEGLRVPEPLRKYLPG-----APEFIPFAK 411
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 112/154 (72%), Gaps = 8/154 (5%)
Query: 315 KVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAW 374
K+EQF+LT P ++SW +MI SEEFY L + Y++V+IVSGALN+AA+KKLDLEAW
Sbjct: 265 KIEQFLLTDP--EKSWDAFHDMIGISEEFYKSLELPYQIVSIVSGALNNAASKKLDLEAW 322
Query: 375 FPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 434
FP G ++ELVSCSNC YQSR L +R+G + + K ++VH LN+T CATTR +C ILE
Sbjct: 323 FPFQGEYKELVSCSNCTDYQSRALEIRFGSKMQTDVKKKYVHCLNSTLCATTRTMCCILE 382
Query: 435 THQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVK 467
+QTE G+R+P+ LRK++P A E IPF K
Sbjct: 383 NYQTEEGLRVPEPLRKYLPG-----APEFIPFAK 411
Score = 46.2 bits (108), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIR 564
+DKYLIATSEQPI A H D WL LPI+
Sbjct: 234 NDKYLIATSEQPISAFHADEWLIPKDLPIK 263
>gi|118431671|ref|NP_148300.2| seryl-tRNA synthetase [Aeropyrum pernix K1]
gi|152031700|sp|Q9YAG3.2|SYS_AERPE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|116062994|dbj|BAA80986.2| seryl-tRNA synthetase [Aeropyrum pernix K1]
Length = 460
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 130/196 (66%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIAT+E P+ A++ +S + + LP++ +GVS CFR+E G+ RD +GIFRVHQF K
Sbjct: 248 EDLYLIATAEHPLAALYYNSEIYDEDLPLKLVGVSPCFRKEAGAGNRDLKGIFRVHQFHK 307
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV + P +ES K+ +E+I N++E + L I +RVVNI SG L A KK DLEAW
Sbjct: 308 VEQFVYSLP--EESSKLHEELISNAKEIFKGLEIPFRVVNIASGDLGACAVKKYDLEAWM 365
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAILETHQ 191
P G +RE+VS SNC D+Q+ RL +R + K + ATA A+TR I AILE Q
Sbjct: 366 PAQGKYREMVSASNCTDWQAYRLGIRLVRRKGMERGYVHTLNATAVASTRTITAILENFQ 425
Query: 192 TETG-VRIPDCLRKFV 206
E G V IP LR+++
Sbjct: 426 DEEGVVAIPRALRRYL 441
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 99/151 (65%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV + P +ES K +E+I N++E + L I +RVVNI SG L
Sbjct: 295 DLKGIFRVHQFHKVEQFVYSLP--EESSKLHEELISNAKEIFKGLEIPFRVVNIASGDLG 352
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A KK DLEAW P G +RE+VS SNC +Q+ RL +R + K M +VH LNATA
Sbjct: 353 ACAVKKYDLEAWMPAQGKYREMVSASNCTDWQAYRLGIRLVRRKGMERG--YVHTLNATA 410
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I AILE Q E G V IP LR+++
Sbjct: 411 VASTRTITAILENFQDEEGVVAIPRALRRYL 441
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
+D YLIAT+E P+ A++ +S + + LP++ +GVS CFR+E AG
Sbjct: 248 EDLYLIATAEHPLAALYYNSEIYDEDLPLKLVGVSPCFRKEAGAG 292
>gi|255513782|gb|EET90047.1| seryl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 431
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 123/187 (65%), Gaps = 8/187 (4%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
+LI+TSE I A+H LP++Y+G+S CFR+E G+HG+DT+GIFRVHQF KVEQ
Sbjct: 237 FLISTSEHAIAAMHAGDLFSGKDLPLKYVGISPCFRREAGAHGKDTKGIFRVHQFYKVEQ 296
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
FV + DESW DE++ NSE Y LGI +RVV+I +G + AAKK D+EA+ P
Sbjct: 297 FVFSRA--DESWGYFDELLGNSESIYRKLGIPHRVVDICTGDIGTVAAKKNDIEAYMPSQ 354
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-----ATACATTRVICAILETHQTETG- 195
G +RE+VSCSNC D+Q+ RL ++Y + Y +TA ATTR + AI+E + + G
Sbjct: 355 GRYREVVSCSNCTDWQAMRLDIKYDDKDGRHYVHTLNSTAIATTRTMVAIIENYLNDDGS 414
Query: 196 VRIPDCL 202
+ +P L
Sbjct: 415 ITVPKAL 421
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 96/147 (65%), Gaps = 7/147 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF KVEQFV + DESW DE++ NSE Y LGI +RVV+I +G +
Sbjct: 281 DTKGIFRVHQFYKVEQFVFSRA--DESWGYFDELLGNSESIYRKLGIPHRVVDICTGDIG 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+EA+ P G +RE+VSCSNC +Q+ RL ++Y + +VH LN+TA
Sbjct: 339 TVAAKKNDIEAYMPSQGRYREVVSCSNCTDWQAMRLDIKYDDKDGRH----YVHTLNSTA 394
Query: 423 CATTRVICAILETHQTETG-VRIPDCL 448
ATTR + AI+E + + G + +P L
Sbjct: 395 IATTRTMVAIIENYLNDDGSITVPKAL 421
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
+LI+TSE I A+H LP++Y+G+S CFR+E A
Sbjct: 237 FLISTSEHAIAAMHAGDLFSGKDLPLKYVGISPCFRREAGA 277
>gi|126178761|ref|YP_001046726.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1]
gi|166222743|sp|A3CTP4.1|SYS_METMJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|125861555|gb|ABN56744.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1]
Length = 425
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 130/200 (65%), Gaps = 17/200 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D+YLIATSE P+ A++ D E LP+R G+S CFR+E+G+HG DT+G+FRVHQF K
Sbjct: 225 EDEYLIATSEHPMAAMYCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFHK 284
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF+ +P ++SW + +E++ N+EE + LG+ YR+V+I +G + AAKK DLE W
Sbjct: 285 VEQFIYATP--EQSWDLHEELMANAEEVFQRLGLPYRIVSICTGDIGTVAAKKYDLEVWM 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLV-----------RYGQTKQKIYATACATTRVICAIL 187
P +RE VSCSNC YQ+ RL + RY T + +TA AT+R I AIL
Sbjct: 343 PREERYREAVSCSNCTAYQAVRLNIKVRNPTEFTEKRYVHT---LNSTAIATSRAIRAIL 399
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V IP LR ++
Sbjct: 400 ENNQNEDGSVTIPKALRPYL 419
Score = 149 bits (377), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF KVEQF+ +P ++SW +E++ N+EE + LG+ YR+V+I +G +
Sbjct: 271 LDTKGLFRVHQFHKVEQFIYATP--EQSWDLHEELMANAEEVFQRLGLPYRIVSICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK DLE W P +RE VSCSNC AYQ+ RL ++ + EK +VH LN+T
Sbjct: 329 GTVAAKKYDLEVWMPREERYREAVSCSNCTAYQAVRLNIKVRNPTEFTEK-RYVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R I AILE +Q E G V IP LR ++
Sbjct: 388 AIATSRAIRAILENNQNEDGSVTIPKALRPYL 419
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY-FH 586
+D+YLIATSE P+ A++ D E LP+R G+S CFR+E A G+ R + FH
Sbjct: 225 EDEYLIATSEHPMAAMYCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFH 283
>gi|429217503|ref|YP_007175493.1| seryl-tRNA synthetase [Caldisphaera lagunensis DSM 15908]
gi|429134032|gb|AFZ71044.1| seryl-tRNA synthetase [Caldisphaera lagunensis DSM 15908]
Length = 460
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 125/196 (63%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D Y+IAT+E PI A++ + L + LP +Y+G S FR+E G+ RD +GIFRVHQF K
Sbjct: 249 EDLYMIATAEHPIAALYYNEELYDDELPKKYVGFSPAFRKEAGAGNRDLKGIFRVHQFHK 308
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF+ + P D S K +E+I NSEE + LG+ YRVVNI SG L A KK DLE W
Sbjct: 309 VEQFIYSLPED--SKKYHEELIMNSEEIFQGLGLPYRVVNIASGDLGACAVKKYDLEVWM 366
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-------ATACATTRVICAILETHQ 191
PG G +RE+VS SNC D+Q+ RL +R + K I +T A+TR I AILE +Q
Sbjct: 367 PGQGKYREMVSGSNCTDWQAYRLNIRLIRRKGMIRDYVHTLNSTGIASTRAITAILENYQ 426
Query: 192 TETG-VRIPDCLRKFV 206
G V IP LRK++
Sbjct: 427 QPDGSVIIPKVLRKYL 442
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 99/151 (65%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQF+ + P D S K +E+I NSEE + LG+ YRVVNI SG L
Sbjct: 296 DLKGIFRVHQFHKVEQFIYSLPED--SKKYHEELIMNSEEIFQGLGLPYRVVNIASGDLG 353
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A KK DLE W PG G +RE+VS SNC +Q+ RL +R + K M ++VH LN+T
Sbjct: 354 ACAVKKYDLEVWMPGQGKYREMVSGSNCTDWQAYRLNIRLIRRKGMIR--DYVHTLNSTG 411
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I AILE +Q G V IP LRK++
Sbjct: 412 IASTRAITAILENYQQPDGSVIIPKVLRKYL 442
Score = 46.2 bits (108), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
+D Y+IAT+E PI A++ + L + LP +Y+G S FR+E AG
Sbjct: 249 EDLYMIATAEHPIAALYYNEELYDDELPKKYVGFSPAFRKEAGAG 293
>gi|218883767|ref|YP_002428149.1| seryl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
gi|254783023|sp|B8D3V1.1|SYS_DESK1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|218765383|gb|ACL10782.1| Seryl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
Length = 459
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 133/200 (66%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E + A+H +PE LP++Y+GVS CFR+E G+ RD +GIFRVH
Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAGNRDLKGIFRVH 302
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQ+V P +ESW +++E+I N+E+ + L + YRVVNI SG L AAKK DL
Sbjct: 303 QFHKVEQYVYAKP--EESWALMEELIGNAEDLFKGLELPYRVVNIASGDLGAPAAKKYDL 360
Query: 135 EAWFPGSGAFRELVSCSNCLDYQS----RRLLVRYGQTKQKIY---ATACATTRVICAIL 187
E W P G FRE+VSCSN D+QS RL+ R G K+ ++ +TA A+TR I +IL
Sbjct: 361 ETWMPAQGLFREMVSCSNTTDWQSYRLKTRLVRRKGMVKEYVHTLNSTAIASTRTITSIL 420
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E Q E G V +P LRK++
Sbjct: 421 ENRQNEDGTVTVPRVLRKYL 440
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 100/151 (66%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQ+V P +ESW ++E+I N+E+ + L + YRVVNI SG L
Sbjct: 294 DLKGIFRVHQFHKVEQYVYAKP--EESWALMEELIGNAEDLFKGLELPYRVVNIASGDLG 351
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P G FRE+VSCSN +QS RL R + K M + E+VH LN+TA
Sbjct: 352 APAAKKYDLETWMPAQGLFREMVSCSNTTDWQSYRLKTRLVRRKGMVK--EYVHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I +ILE Q E G V +P LRK++
Sbjct: 410 IASTRTITSILENRQNEDGTVTVPRVLRKYL 440
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E + A+H +PE LP++Y+GVS CFR+E AG
Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAG 291
>gi|443918059|gb|ELU38641.1| seryl-tRNA synthetase [Rhizoctonia solani AG-1 IA]
Length = 381
Score = 182 bits (463), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 106/143 (74%), Gaps = 7/143 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
+DKYLIATSEQPI A H D PE L Y G STCFR+E G+ GRDT GIFRVHQF
Sbjct: 235 EDKYLIATSEQPISAFHSDELFDQPEKQL---YAGYSTCFRKEAGAAGRDTWGIFRVHQF 291
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF +T P + SW+M + M++N+E FY L I Y+VV IVSGALN AA++K DLEA
Sbjct: 292 EKVEQFCITQP--EHSWEMFEHMVENAEAFYQSLKIPYQVVAIVSGALNLAASQKYDLEA 349
Query: 137 WFPGSGAFRELVSCSNCLDYQSR 159
WFP GA++ELVSCSNC DY+ R
Sbjct: 350 WFPFQGAYKELVSCSNCTDYRER 372
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GIFRVHQFEKVEQF +T P + SW+ + M++N+E FY L I Y+VV IVSG
Sbjct: 278 AGRDTWGIFRVHQFEKVEQFCITQP--EHSWEMFEHMVENAEAFYQSLKIPYQVVAIVSG 335
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSR 396
ALN AA++K DLEAWFP GA++ELVSCSNC Y+ R
Sbjct: 336 ALNLAASQKYDLEAWFPFQGAYKELVSCSNCTDYRER 372
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDAGMCRTY 584
+DKYLIATSEQPI A H D PE L Y G STCFR+E A T+
Sbjct: 235 EDKYLIATSEQPISAFHSDELFDQPEKQL---YAGYSTCFRKEAGAAGRDTW 283
>gi|302544049|ref|ZP_07296391.1| serine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302461667|gb|EFL24760.1| serine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
Length = 425
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 123/194 (63%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D L LP RY G S+CFR+E GS+G+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILESEQLPRRYAGFSSCFRREAGSYGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV T+P + E+ +++ +++ L + +RVV++ SG L +A +K D EAW
Sbjct: 283 VEMFVYTTPEEAEAEHQ--RLLEWEKQWLTSLELPFRVVDLASGDLGSSATRKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S SN ++QSRRL +R + K+ + T CA TR I AILE HQ
Sbjct: 341 PTQGKYRELTSTSNTTEFQSRRLSIRMREGKKVRPLATLNGTLCAVTRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR F+
Sbjct: 401 DGSVRVPEVLRPFL 414
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE FV T+P + E+ +++ +++ L + +RVV++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFVYTTPEEAEAEH--QRLLEWEKQWLTSLELPFRVVDLASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P G +REL S SN +QSRRL +R + KK+ + LN T
Sbjct: 328 SSATRKFDCEAWIPTQGKYRELTSTSNTTEFQSRRLSIRMREGKKVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR I AILE HQ G VR+P+ LR F+
Sbjct: 384 CAVTRTIVAILENHQQADGSVRVPEVLRPFL 414
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D L LP RY G S+CFR+E
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILESEQLPRRYAGFSSCFRREA 264
>gi|424813645|ref|ZP_18238833.1| seryl-tRNA synthetase [Candidatus Nanosalina sp. J07AB43]
gi|339758591|gb|EGQ43846.1| seryl-tRNA synthetase [Candidatus Nanosalina sp. J07AB43]
Length = 424
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 124/193 (64%), Gaps = 8/193 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
++YLIATSEQ + A H D L LP +Y G ST FR+E G HG+ TRGI+R+HQFEK+
Sbjct: 224 ERYLIATSEQTLAAYHFDEILQPQELPRKYAGYSTNFRREAGKHGQQTRGIWRLHQFEKI 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF+ P +ES + DE+++N+EE DL + YRVVN+ +G L AKK D+EAW P
Sbjct: 284 EQFIFCKP--EESQDLHDELLENAEEVMKDLNLPYRVVNVCTGDLGDTPAKKYDIEAWRP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETHQTE 193
+ E+VSCSNC +YQ +L R QT + +T AT R++ I+E +QTE
Sbjct: 342 SLEEYGEVVSCSNCTEYQGTKLKTRIRRQDSDNQTVHTLNSTLIATQRLMTIIIENNQTE 401
Query: 194 TGVRIPDCLRKFV 206
G+++P+ L+ ++
Sbjct: 402 RGIKVPEALQGYM 414
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 97/149 (65%), Gaps = 5/149 (3%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
TRGI+R+HQFEK+EQF+ P +ES DE+++N+EE DL + YRVVN+ +G L
Sbjct: 271 TRGIWRLHQFEKIEQFIFCKP--EESQDLHDELLENAEEVMKDLNLPYRVVNVCTGDLGD 328
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 423
AKK D+EAW P + E+VSCSNC YQ +L R ++ + + VH LN+T
Sbjct: 329 TPAKKYDIEAWRPSLEEYGEVVSCSNCTEYQGTKLKTR---IRRQDSDNQTVHTLNSTLI 385
Query: 424 ATTRVICAILETHQTETGVRIPDCLRKFV 452
AT R++ I+E +QTE G+++P+ L+ ++
Sbjct: 386 ATQRLMTIIIENNQTERGIKVPEALQGYM 414
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
++YLIATSEQ + A H D L LP +Y G ST FR+E
Sbjct: 224 ERYLIATSEQTLAAYHFDEILQPQELPRKYAGYSTNFRREA 264
>gi|345016369|ref|YP_004818723.1| seryl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
gi|344042718|gb|AEM88443.1| Seryl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
Length = 412
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 123/194 (63%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D L +LP RY G S+CFR+E GS+G+DTRGIFRVHQF+K
Sbjct: 210 DDLYLVGTSEVPLAAYHMDEILEADALPRRYAGFSSCFRREAGSYGKDTRGIFRVHQFDK 269
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +V T+P D E+ ++ +++ L + +RVV++ SG L +A +K D EAW
Sbjct: 270 VEMYVYTTPEDAEAEHQ--RLLDWEKQWLTSLELPFRVVDLASGDLGSSATRKFDCEAWI 327
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S SN ++QSRRL +R + K+ + T CA TR I AILE HQ
Sbjct: 328 PTQGKYRELTSTSNTTEFQSRRLSIRMREGKKVRPLATLNGTLCAVTRTIVAILENHQQA 387
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR F+
Sbjct: 388 DGSVRVPEALRPFL 401
Score = 132 bits (333), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE +V T+P D E+ ++ +++ L + +RVV++ SG L
Sbjct: 257 DTRGIFRVHQFDKVEMYVYTTPEDAEAEH--QRLLDWEKQWLTSLELPFRVVDLASGDLG 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P G +REL S SN +QSRRL +R + KK+ + LN T
Sbjct: 315 SSATRKFDCEAWIPTQGKYRELTSTSNTTEFQSRRLSIRMREGKKVRP----LATLNGTL 370
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR I AILE HQ G VR+P+ LR F+
Sbjct: 371 CAVTRTIVAILENHQQADGSVRVPEALRPFL 401
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D L +LP RY G S+CFR+E
Sbjct: 210 DDLYLVGTSEVPLAAYHMDEILEADALPRRYAGFSSCFRREA 251
>gi|307354815|ref|YP_003895866.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
gi|307158048|gb|ADN37428.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
Length = 425
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 131/197 (66%), Gaps = 11/197 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D++LIATSE P+ A++ D E LP+R G+STCFR+E+GSHG DT+G+FRVHQF K
Sbjct: 225 EDEFLIATSEHPMAAMYMDEIFEEKDLPLRLAGISTCFRREIGSHGLDTKGLFRVHQFNK 284
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF+ D SW++ +E+++N+E+ + L + Y VVNI +G + AAKK D+E W
Sbjct: 285 VEQFIYCKQED--SWRLHEELLKNAEDIFRMLKLPYHVVNICTGDIGTVAAKKYDIEVWM 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIY-----ATACATTRVICAILETH 190
P +RE+VSCSNC YQ+ RL ++ + ++K Y +TA ATTR + AILE
Sbjct: 343 PREETYREVVSCSNCTAYQAVRLNIKVRDPHEFEKKDYVHTLNSTAVATTRTLRAILENC 402
Query: 191 QTETG-VRIPDCLRKFV 206
Q E G V IP+ LR ++
Sbjct: 403 QEEDGTVVIPEALRPYM 419
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 101/152 (66%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF KVEQF+ D SW+ +E+++N+E+ + L + Y VVNI +G +
Sbjct: 271 LDTKGLFRVHQFNKVEQFIYCKQED--SWRLHEELLKNAEDIFRMLKLPYHVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+E W P +RE+VSCSNC AYQ+ RL ++ + EK ++VH LN+T
Sbjct: 329 GTVAAKKYDIEVWMPREETYREVVSCSNCTAYQAVRLNIKVRDPHEF-EKKDYVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A ATTR + AILE Q E G V IP+ LR ++
Sbjct: 388 AVATTRTLRAILENCQEEDGTVVIPEALRPYM 419
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 40/146 (27%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREG 594
+D++LIATSE P+ A++ D E LP+R G+STCFR+E + T +G
Sbjct: 225 EDEFLIATSEHPMAAMYMDEIFEEKDLPLRLAGISTCFRREIGSHGLDT---------KG 275
Query: 595 LLSEATSEEVDQADPFYAHC------RLHADKLEDFSKFSKIL-----VCCVCLGE---- 639
L +V+Q + +C RLH + L++ ++L V +C G+
Sbjct: 276 LFRVHQFNKVEQ----FIYCKQEDSWRLHEELLKNAEDIFRMLKLPYHVVNICTGDIGTV 331
Query: 640 ------------RSDDVNEIVECDSC 653
R + E+V C +C
Sbjct: 332 AAKKYDIEVWMPREETYREVVSCSNC 357
>gi|357391001|ref|YP_004905842.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054]
gi|311897478|dbj|BAJ29886.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054]
Length = 426
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE P+ A H D L LP+RY G S+CFR+E G++G+DTRGI RVHQFEK
Sbjct: 223 DDRYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSSCFRREAGTYGKDTRGIIRVHQFEK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV T+P D E+ ++Q ++F L + YRV+++ SG L +AA+K D+EAW
Sbjct: 283 VEMFVFTTPEDAEAEHR--RLLQWEKDFLNALELPYRVIDVASGDLGSSAARKFDIEAWV 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILETHQTE 193
P G +RE+ S SN +YQ+RRL +R + T A RVI A+LE HQ
Sbjct: 341 PTQGRYREVTSTSNTTEYQARRLAIRMRDADGVRPLATLNGTLVAVPRVIVALLENHQLP 400
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR F+
Sbjct: 401 DGSVALPEALRPFL 414
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQFEKVE FV T+P D E+ ++Q ++F L + YRV+++ SG L
Sbjct: 270 DTRGIIRVHQFEKVEMFVFTTPEDAEAEHR--RLLQWEKDFLNALELPYRVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D+EAW P G +RE+ S SN YQ+RRL +R + + + + LN T
Sbjct: 328 SSAARKFDIEAWVPTQGRYREVTSTSNTTEYQARRLAIRM----RDADGVRPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A RVI A+LE HQ G V +P+ LR F+
Sbjct: 384 VAVPRVIVALLENHQLPDGSVALPEALRPFL 414
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE P+ A H D L LP+RY G S+CFR+E
Sbjct: 223 DDRYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSSCFRREA 264
>gi|302348069|ref|YP_003815707.1| Seryl-tRNA synthetase [Acidilobus saccharovorans 345-15]
gi|302328481|gb|ADL18676.1| Seryl-tRNA synthetase [Acidilobus saccharovorans 345-15]
Length = 459
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 133/219 (60%), Gaps = 14/219 (6%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIAT+E + A++ + L + LP +++G+S FR+E G+ +D +GIFRVH
Sbjct: 242 KIENDDLYLIATAEHSLAAMYYNEELYDDELPKKFVGISPAFRREAGAANKDLKGIFRVH 301
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ES K+ +E+I N+E + LGI YRVVNI SG L A KK DL
Sbjct: 302 QFHKVEQFVFSKP--EESQKIHEELISNAEGLFQGLGIPYRVVNIASGDLGACAVKKYDL 359
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKQKIYATACATTRVICAI 186
EAW P G +RE+VS SNC D+Q+ RL +R G+ + +T A+TR I AI
Sbjct: 360 EAWMPAQGKYREMVSASNCTDWQAYRLNIRLIRRKGMERGEYVHTLNSTGIASTRTITAI 419
Query: 187 LETHQTETG-VRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
LE Q G V IP LRK++ +A F+K P
Sbjct: 420 LENFQEPDGTVIIPKVLRKYLEPF---DAAPKDFIKPRP 455
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 7/172 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQFV + P +ES K +E+I N+E + LGI YRVVNI SG
Sbjct: 290 ANKDLKGIFRVHQFHKVEQFVFSKP--EESQKIHEELISNAEGLFQGLGIPYRVVNIASG 347
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L A KK DLEAW P G +RE+VS SNC +Q+ RL +R + K M E+ E+VH LN
Sbjct: 348 DLGACAVKKYDLEAWMPAQGKYREMVSASNCTDWQAYRLNIRLIRRKGM-ERGEYVHTLN 406
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
+T A+TR I AILE Q G V IP LRK++ +A F+K P
Sbjct: 407 STGIASTRTITAILENFQEPDGTVIIPKVLRKYLEPF---DAAPKDFIKPRP 455
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E DD YLIAT+E + A++ + L + LP +++G+S FR+E A G+ R +
Sbjct: 242 KIENDDLYLIATAEHSLAAMYYNEELYDDELPKKFVGISPAFRREAGAANKDLKGIFRVH 301
Query: 585 -FH 586
FH
Sbjct: 302 QFH 304
>gi|72160435|ref|YP_288092.1| seryl-tRNA synthetase [Thermobifida fusca YX]
gi|123630454|sp|Q47TZ5.1|SYS_THEFY RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|71914167|gb|AAZ54069.1| seryl-tRNA synthetase [Thermobifida fusca YX]
Length = 422
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 122/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H + LP +LP RY+G S+CFR+E GS+G+DTRGI RVHQF K
Sbjct: 220 DDLYLVGTSEVPLAGYHANEILPADALPTRYIGWSSCFRREAGSYGKDTRGIIRVHQFNK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P DE+ + ++ E + + YRVV+I +G L +AA+K D EAW
Sbjct: 280 VEMFVYAHP--DEAHEEHLRLLAWEREMLDLIEVPYRVVDIAAGDLGTSAARKYDCEAWL 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQT--KQKIYAT---ACATTRVICAILETHQTE 193
P G +REL S SNC ++QSRRL +RY T K + AT ATTR I AILE HQ E
Sbjct: 338 PSQGRYRELTSTSNCTEFQSRRLNIRYRDTDGKPRFVATLNGTLATTRWIVAILENHQQE 397
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 398 DGSVVVPEALRPFV 411
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE FV P DE+ + ++ E + + YRVV+I +G L
Sbjct: 267 DTRGIIRVHQFNKVEMFVYAHP--DEAHEEHLRLLAWEREMLDLIEVPYRVVDIAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +QSRRL +RY T + K FV LN T
Sbjct: 325 TSAARKYDCEAWLPSQGRYRELTSTSNCTEFQSRRLNIRYRDT---DGKPRFVATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ E G V +P+ LR FV
Sbjct: 381 LATTRWIVAILENHQQEDGSVVVPEALRPFV 411
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H + LP +LP RY+G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHANEILPADALPTRYIGWSSCFRREA 261
>gi|443626125|ref|ZP_21110554.1| putative Serine--tRNA ligase [Streptomyces viridochromogenes Tue57]
gi|443340340|gb|ELS54553.1| putative Serine--tRNA ligase [Streptomyces viridochromogenes Tue57]
Length = 412
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D L LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 210 DDLYLVGTSEVPLAAYHMDEILDAEKLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 269
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D ++ +++ +++ L + +RV+++ S L +AA+K D EAW
Sbjct: 270 VEMFSYVAPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASADLGSSAARKFDCEAWI 327
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R KQ + T CA R I AILE HQ
Sbjct: 328 PTQGKYRELTSTSDCTEFQSRRLSIRVRDGKQVKPLATLNGTLCAVPRTIVAILENHQQA 387
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 388 DGSVRVPEVLRPYL 401
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D ++ +++ +++ L + +RV+++ S L
Sbjct: 257 DTRGIFRVHQFDKVEMFSYVAPEDSQAEH--QRLLEWEKQWLTSLELPFRVIDVASADLG 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +QSRRL +R + ++++ + LN T
Sbjct: 315 SSAARKFDCEAWIPTQGKYRELTSTSDCTEFQSRRLSIRV----RDGKQVKPLATLNGTL 370
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 371 CAVPRTIVAILENHQQADGSVRVPEVLRPYL 401
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 210 DDLYLVGTSEVPLAAYHMDEILDAEKLPLRYAGFSPCFRREA 251
>gi|395772032|ref|ZP_10452547.1| seryl-tRNA ligase [Streptomyces acidiscabies 84-104]
Length = 425
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + A H D L LP+RY G S CFR+E GSHG+DT+GIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVALAAYHMDEILDAERLPLRYAGFSPCFRREAGSHGKDTKGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D E+ +++ +++ L + +RV+++ +G L +AA+K D EAW
Sbjct: 283 VEMFSYVAPEDSEAEHR--RLLEWEKQWLTSLELPFRVIDVATGDLGSSAARKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +RY + K + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLSIRYREGKTVRPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR F+
Sbjct: 401 DGSVRVPEVLRPFL 414
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF+KVE F +P D E+ +++ +++ L + +RV+++ +G L
Sbjct: 270 DTKGIFRVHQFDKVEMFSYVAPEDSEAEHR--RLLEWEKQWLTSLELPFRVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +QSRRL +RY + K + + LN T
Sbjct: 328 SSAARKFDCEAWIPTQGKYRELTSTSDCTEFQSRRLSIRYREGKTVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I AILE HQ G VR+P+ LR F+ V E
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPFLGGREVLE 421
Score = 47.4 bits (111), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + A H D L LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVALAAYHMDEILDAERLPLRYAGFSPCFRREA 264
>gi|386841200|ref|YP_006246258.1| seryl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101501|gb|AEY90385.1| seryl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794494|gb|AGF64543.1| seryl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 412
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 210 DDLYLVGTSEVPLAAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 269
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D ++ +++ +++ L + +RV+++ SG L +AA+K D EAW
Sbjct: 270 VEMFSYVAPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKFDCEAWI 327
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++Q+RRL +R KQ + T CA R I AILE HQ
Sbjct: 328 PTQGKYRELTSTSDCTEFQARRLSIRVRDGKQVKPLATLNGTLCAVPRTIVAILENHQQA 387
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 388 DGSVRVPEVLRPYL 401
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D ++ +++ +++ L + +RV+++ SG L
Sbjct: 257 DTRGIFRVHQFDKVEMFSYVAPEDSQAEH--QRLLEWEKQWLTSLELPFRVIDVASGDLG 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +Q+RRL +R + ++++ + LN T
Sbjct: 315 SSAARKFDCEAWIPTQGKYRELTSTSDCTEFQARRLSIRV----RDGKQVKPLATLNGTL 370
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I AILE HQ G VR+P+ LR ++ V E
Sbjct: 371 CAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVLE 408
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 210 DDLYLVGTSEVPLAAYHMDEIIDADRLPLRYAGFSPCFRREA 251
>gi|383637416|ref|ZP_09950822.1| seryl-tRNA synthetase [Streptomyces chartreusis NRRL 12338]
Length = 425
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D L LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILDAEKLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D ++ +++ +++ L + YRV+++ S L +A++K D EAW
Sbjct: 283 VEMFSYVAPEDSQAEHQ--RLLEWEKQWLTSLELPYRVIDVASADLGASASRKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R KQ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLSIRVRDGKQVRPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D ++ +++ +++ L + YRV+++ S L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDSQAEH--QRLLEWEKQWLTSLELPYRVIDVASADLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S S+C +QSRRL +R K++ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSTSDCTEFQSRRLSIRVRDGKQVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPYL 414
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILDAEKLPLRYAGFSPCFRREA 264
>gi|302552608|ref|ZP_07304950.1| seryl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
gi|302470226|gb|EFL33319.1| seryl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
Length = 425
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D L LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D ++ +++ +++ L + +RV+++ S L +AA+K D EAW
Sbjct: 283 VEMFSYVAPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASADLGSSAARKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R KQ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCAEFQSRRLSIRVRDGKQVRPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D ++ +++ +++ L + +RV+++ S L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASADLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +QSRRL +R K++ + LN T
Sbjct: 328 SSAARKFDCEAWIPTQGKYRELTSTSDCAEFQSRRLSIRVRDGKQVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPYL 414
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILDADRLPLRYAGFSPCFRREA 264
>gi|385806070|ref|YP_005842468.1| seryl-tRNA synthetase [Fervidicoccus fontis Kam940]
gi|383795933|gb|AFH43016.1| seryl-tRNA synthetase [Fervidicoccus fontis Kam940]
Length = 459
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 121/203 (59%), Gaps = 10/203 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D LI T+E P+ + D+ + E LP++ +G S CFR+E G+ RD +GIFRVH
Sbjct: 246 KIENEDLNLIGTAEHPLMGLAYDNPIREQDLPLKLVGWSPCFRREAGAGNRDLKGIFRVH 305
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P D SWK LDEM+ N+EE LG+ YRVVN+VSG L AAKK D+
Sbjct: 306 QFHKVEQFVFAHP--DNSWKFLDEMVANTEEILQGLGLPYRVVNVVSGELGLPAAKKYDI 363
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAIL 187
E W P G +RE+ S S LD+Q+ R + Y + + T TTR I AI+
Sbjct: 364 EVWMPAQGKYREIASISQVLDWQAFRANLTYIKASDGRREYLHTLNGTGIPTTRAISAIV 423
Query: 188 ETHQTETG-VRIPDCLRKFVPAV 209
E Q E G V IP L+K++ +
Sbjct: 424 ENFQDEEGNVAIPSVLKKYLENI 446
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 96/154 (62%), Gaps = 5/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV P D SWK LDEM+ N+EE LG+ YRVVN+VSG L
Sbjct: 297 DLKGIFRVHQFHKVEQFVFAHP--DNSWKFLDEMVANTEEILQGLGLPYRVVNVVSGELG 354
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W P G +RE+ S S L +Q+ R + Y K + + E++H LN T
Sbjct: 355 LPAAKKYDIEVWMPAQGKYREIASISQVLDWQAFRANLTY--IKASDGRREYLHTLNGTG 412
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
TTR I AI+E Q E G V IP L+K++ +
Sbjct: 413 IPTTRAISAIVENFQDEEGNVAIPSVLKKYLENI 446
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D LI T+E P+ + D+ + E LP++ +G S CFR+E AG
Sbjct: 246 KIENEDLNLIGTAEHPLMGLAYDNPIREQDLPLKLVGWSPCFRREAGAG 294
>gi|381399804|ref|ZP_09924822.1| Seryl-tRNA synthetase [Microbacterium laevaniformans OR221]
gi|380772867|gb|EIC06553.1| Seryl-tRNA synthetase [Microbacterium laevaniformans OR221]
Length = 426
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 128/210 (60%), Gaps = 13/210 (6%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YL+ TSE P+ H L + RY G STC+R+E GS+G+DTRGI RVH
Sbjct: 216 KLEADDLYLVGTSEVPLAGYHMGEILDLTAGAKRYAGWSTCYRREAGSYGKDTRGIIRVH 275
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+E FV T+P D E+ + ++ E+ DLG++YRV+++ +G L +AA+K D+
Sbjct: 276 QFNKLEMFVYTTPEDAETEHL--RLVALQEQMLQDLGLSYRVIDVAAGDLGSSAARKYDV 333
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYAT---ACATTRVIC 184
EAW P GA+REL S SNC YQ+RRL VR+ G K AT ATTR I
Sbjct: 334 EAWVPTQGAYRELTSTSNCTTYQARRLDVRHRPAVEGGGAGKTAPVATLNGTLATTRWIV 393
Query: 185 AILETHQTETG-VRIPDCLRKFVPAVYLNE 213
A+LETHQ G V IP+ LR ++ + + E
Sbjct: 394 ALLETHQRADGSVVIPEVLRPYLGGLEVAE 423
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 99/160 (61%), Gaps = 6/160 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF K+E FV T+P D E+ ++ E+ DLG++YRV+++ +G L
Sbjct: 267 DTRGIIRVHQFNKLEMFVYTTPEDAETEHL--RLVALQEQMLQDLGLSYRVIDVAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMN--EKIEFVHMLNA 420
+AA+K D+EAW P GA+REL S SNC YQ+RRL VR+ + K V LN
Sbjct: 325 SSAARKYDVEAWVPTQGAYRELTSTSNCTTYQARRLDVRHRPAVEGGGAGKTAPVATLNG 384
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
T ATTR I A+LETHQ G V IP+ LR ++ + V E
Sbjct: 385 T-LATTRWIVALLETHQRADGSVVIPEVLRPYLGGLEVAE 423
Score = 40.8 bits (94), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E DD YL+ TSE P+ H L + RY G STC+R+E
Sbjct: 216 KLEADDLYLVGTSEVPLAGYHMGEILDLTAGAKRYAGWSTCYRREA 261
>gi|384564099|ref|ZP_10011203.1| seryl-tRNA synthetase [Saccharomonospora glauca K62]
gi|384519953|gb|EIE97148.1| seryl-tRNA synthetase [Saccharomonospora glauca K62]
Length = 420
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L + P+RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHADEILDLSDGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P D E ++++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 280 VEMFVFCEPSDAEEEH--EKLLAWEEEMLAKIEVPYRVIDTAAGDLGASAARKYDCEAWI 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQTE 193
P A+REL S SNC YQ+RRL VRY + +I AT ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTYQARRLAVRYRDADGRPQIAATLNGTLATTRWIVAILENHQQA 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR F+
Sbjct: 398 DGSVRVPEALRPFL 411
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E + ++++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVFCEPSDAE--EEHEKLLAWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC YQ+RRL VRY + + + + LN T
Sbjct: 325 ASAARKYDCEAWIPTQQAYRELTSTSNCTTYQARRLAVRY---RDADGRPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P+ LR F+
Sbjct: 381 LATTRWIVAILENHQQADGSVRVPEALRPFL 411
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L + P+RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHADEILDLSDGPLRYAGWSSCFRREA 261
>gi|383824310|ref|ZP_09979494.1| seryl-tRNA synthetase [Mycobacterium xenopi RIVM700367]
gi|383337583|gb|EID15959.1| seryl-tRNA synthetase [Mycobacterium xenopi RIVM700367]
Length = 417
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L + P+RY+G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHGDEILDLSGGPLRYVGWSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E+ + ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCVPDDAEAEH--ERLLGWQREMLARIEVPYRVIDVAAGELGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P A+REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WLPSQHAYRELTSTSNCTTFQARRLATRYRDADGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+PD L FV
Sbjct: 395 RPDGSVRVPDALVPFV 410
Score = 126 bits (316), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ + ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCVPDDAEAEH--ERLLGWQREMLARIEVPYRVIDVAAGELG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWLPSQHAYRELTSTSNCTTFQARRLATRY---RDADGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+PD L FV
Sbjct: 380 LATTRWLVAILENHQRPDGSVRVPDALVPFV 410
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L + P+RY+G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHGDEILDLSGGPLRYVGWSSCFRREA 260
>gi|170780874|ref|YP_001709206.1| seryl-tRNA synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|189083563|sp|B0RCF1.1|SYS_CLAMS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|169155442|emb|CAQ00549.1| seryl-tRNA synthase [Clavibacter michiganensis subsp. sepedonicus]
Length = 426
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 122/201 (60%), Gaps = 8/201 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL TSE + H D L A+ PIRY G STC+R+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLTGTSEVALAGYHADEILDLAAGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E F P D E+ + ++ E DLG+AYRV++ +G L +AA+K D+EAW
Sbjct: 280 LEMFSYVDPADAEAEH--ERLLAMQERMMQDLGLAYRVIDTAAGDLGSSAARKYDVEAWI 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P GA+REL S SNC +Q+RRL R+ + A ATTR I AILETHQ
Sbjct: 338 PTQGAYRELTSTSNCTTFQARRLGTRFRGEDGRTSPVATLNGTLATTRWIVAILETHQRA 397
Query: 194 TG-VRIPDCLRKFVPAVYLNE 213
G VR+P+ LR ++ + + E
Sbjct: 398 DGSVRVPEALRPYLGGLEVLE 418
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 97/158 (61%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E F P D E+ + ++ E DLG+AYRV++ +G L
Sbjct: 267 DTRGIIRVHQFQKLEMFSYVDPADAEAEH--ERLLAMQERMMQDLGLAYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D+EAW P GA+REL S SNC +Q+RRL R+ + + + V LN T
Sbjct: 325 SSAARKYDVEAWIPTQGAYRELTSTSNCTTFQARRLGTRF---RGEDGRTSPVATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
ATTR I AILETHQ G VR+P+ LR ++ + V E
Sbjct: 381 LATTRWIVAILETHQRADGSVRVPEALRPYLGGLEVLE 418
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL TSE + H D L A+ PIRY G STC+R+E
Sbjct: 220 DDLYLTGTSEVALAGYHADEILDLAAGPIRYAGWSTCYRKEA 261
>gi|345849283|ref|ZP_08802296.1| seryl-tRNA synthetase [Streptomyces zinciresistens K42]
gi|345639189|gb|EGX60683.1| seryl-tRNA synthetase [Streptomyces zinciresistens K42]
Length = 425
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 119/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D L LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F + D + +++ +++ L + YRV+++ SG L +A++K D EAW
Sbjct: 283 VEMFSYVASEDSRAEHQ--RLLEWEKQWLTSLELPYRVIDVASGDLGASASRKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R KQ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLSIRVRDGKQVKPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F + D S +++ +++ L + YRV+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVASED--SRAEHQRLLEWEKQWLTSLELPYRVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S S+C +QSRRL +R K +++ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSTSDCTEFQSRRLSIRVRDGK----QVKPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I AILE HQ G VR+P+ LR ++ V E
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVLE 421
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCFRREA 264
>gi|374988045|ref|YP_004963540.1| seryl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
gi|297158697|gb|ADI08409.1| seryl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
Length = 425
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 124/194 (63%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +L+ TSE P+ A H D L + LP RY G S+CFR+E GS+G+DTRGIFRVHQF+K
Sbjct: 223 DDLFLVGTSEVPLAAYHMDEILDVSQLPRRYAGFSSCFRREAGSYGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV T+P + E+ +++ +++ L + +RV+++ SG L +A +K D EAW
Sbjct: 283 VEMFVYTTPEEAEAEHQ--RLLEWEKQWLTSLELPFRVIDLASGDLGASATRKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S SN ++QSRRL +R + K+ + T CA TR I A+LE HQ
Sbjct: 341 PTQGKYRELTSTSNTTEFQSRRLSIRMREDKRVRPLATLNGTLCAVTRTIVALLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEGLRPYL 414
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE FV T+P + E+ +++ +++ L + +RV+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFVYTTPEEAEAEH--QRLLEWEKQWLTSLELPFRVIDLASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P G +REL S SN +QSRRL +R + K++ + LN T
Sbjct: 328 ASATRKFDCEAWIPTQGKYRELTSTSNTTEFQSRRLSIRMREDKRVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR I A+LE HQ G VR+P+ LR ++
Sbjct: 384 CAVTRTIVALLENHQQADGSVRVPEGLRPYL 414
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD +L+ TSE P+ A H D L + LP RY G S+CFR+E
Sbjct: 223 DDLFLVGTSEVPLAAYHMDEILDVSQLPRRYAGFSSCFRREA 264
>gi|307596091|ref|YP_003902408.1| seryl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
gi|307551292|gb|ADN51357.1| seryl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
Length = 468
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 127/199 (63%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E PI A R L E LP+ ++GVS FR+E + RD +GIFRVH
Sbjct: 244 KVENEDLYLIGTAEHPIAAYLRRMELLEDQLPLLFVGVSPSFRREASAGNRDMKGIFRVH 303
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +E+I+N+EE + LG+ YRVV + + + AAK+ DL
Sbjct: 304 QFHKVEQFVFSLP--EESWRWHEELIRNAEELWQGLGLPYRVVVLCAHDMGRCAAKQYDL 361
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P G +RE+VSCSNC D+QS +L +R + + + +TA A+TR I AILE
Sbjct: 362 EVWMPAQGMYREMVSCSNCTDWQSAKLGIRVLRRDMRREFVHTLNSTAIASTRAITAILE 421
Query: 189 THQTETG-VRIPDCLRKFV 206
+Q G V IP LRK++
Sbjct: 422 NYQEPDGTVVIPKVLRKYL 440
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV + P +ESW+ +E+I+N+EE + LG+ YRVV + + +
Sbjct: 295 DMKGIFRVHQFHKVEQFVFSLP--EESWRWHEELIRNAEELWQGLGLPYRVVVLCAHDMG 352
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK+ DLE W P G +RE+VSCSNC +QS +L +R + + + EFVH LN+TA
Sbjct: 353 RCAAKQYDLEVWMPAQGMYREMVSCSNCTDWQSAKLGIR---VLRRDMRREFVHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I AILE +Q G V IP LRK++
Sbjct: 410 IASTRAITAILENYQEPDGTVVIPKVLRKYL 440
Score = 46.6 bits (109), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLI T+E PI A R L E LP+ ++GVS FR+E AG
Sbjct: 244 KVENEDLYLIGTAEHPIAAYLRRMELLEDQLPLLFVGVSPSFRREASAG 292
>gi|325967919|ref|YP_004244111.1| seryl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323707122|gb|ADY00609.1| seryl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 468
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 127/199 (63%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E PI A R + L E LP+ ++GVS FR+E + RD +GIFRVH
Sbjct: 244 KVENEDLYLIGTAEHPIAAYLRHTELLEDQLPLLFVGVSPSFRREASAGNRDMKGIFRVH 303
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P D SW+ +E+I+N+EE + LG+ YRVV + + + AAK+ DL
Sbjct: 304 QFHKVEQFVFSLPED--SWRWHEELIRNAEELWQGLGLPYRVVLLCAHDMGRCAAKQYDL 361
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P G +RE+VSCSNC D+QS +L +R + + + +TA A+TR I AILE
Sbjct: 362 EVWMPAQGMYREMVSCSNCTDWQSAKLGIRVLRKDMRREFVHTLNSTAIASTRTITAILE 421
Query: 189 THQTETG-VRIPDCLRKFV 206
+Q G V IP LR+++
Sbjct: 422 NYQEPDGTVVIPKALRRYL 440
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 101/151 (66%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV + P D SW+ +E+I+N+EE + LG+ YRVV + + +
Sbjct: 295 DMKGIFRVHQFHKVEQFVFSLPED--SWRWHEELIRNAEELWQGLGLPYRVVLLCAHDMG 352
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK+ DLE W P G +RE+VSCSNC +QS +L +R + + + EFVH LN+TA
Sbjct: 353 RCAAKQYDLEVWMPAQGMYREMVSCSNCTDWQSAKLGIR---VLRKDMRREFVHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I AILE +Q G V IP LR+++
Sbjct: 410 IASTRTITAILENYQEPDGTVVIPKALRRYL 440
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLI T+E PI A R + L E LP+ ++GVS FR+E AG
Sbjct: 244 KVENEDLYLIGTAEHPIAAYLRHTELLEDQLPLLFVGVSPSFRREASAG 292
>gi|295837833|ref|ZP_06824766.1| serine-tRNA ligase [Streptomyces sp. SPB74]
gi|197698265|gb|EDY45198.1| serine-tRNA ligase [Streptomyces sp. SPB74]
Length = 429
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D E+ +++ +++ LG+ +RV+++ +G L +AA+K D EAW
Sbjct: 283 VEMFTYVAPEDSEAEHR--RLLEWEKQWLTSLGLPFRVIDVATGDLGSSAARKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++Q+RRL +R K+ + T CA +R I A+LE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRPLATLNGTLCAVSRTIVALLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ LG+ +RV+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFTYVAPEDSEAEHR--RLLEWEKQWLTSLGLPFRVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +Q+RRL +R KK + LN T
Sbjct: 328 SSAARKFDCEAWIPTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA +R I A+LE HQ G VR+P+ LR ++ V E
Sbjct: 384 CAVSRTIVALLENHQQADGSVRVPEVLRPYLGGREVLE 421
Score = 45.1 bits (105), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H D + LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREA 264
>gi|302559736|ref|ZP_07312078.1| seryl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
gi|302477354|gb|EFL40447.1| seryl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
Length = 425
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + A H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVALAAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D ++ +++ +++ L + +RV+++ SG L +AA+K D EAW
Sbjct: 283 VEMFSYVAPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKYDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C +YQSRRL +R + K+ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEYQSRRLSIRLREDKKVRPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D ++ +++ +++ L + +RV+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C YQSRRL +R + KK+ + LN T
Sbjct: 328 SSAARKYDCEAWIPTQGKYRELTSTSDCTEYQSRRLSIRLREDKKVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPYL 414
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + A H D + LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVALAAYHMDEIIDADRLPLRYAGFSPCFRREA 264
>gi|440474901|gb|ELQ43616.1| seryl-tRNA synthetase [Magnaporthe oryzae Y34]
Length = 455
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 119/208 (57%), Gaps = 41/208 (19%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYLIATSEQPI H + WL LP+RY G STCFR+E G HGRD G FRVHQFEKV
Sbjct: 233 DKYLIATSEQPISVYHANEWLLPQDLPLRYAGYSTCFRKEAGGHGRDVWGTFRVHQFEKV 292
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQF +T P ++SW+M DEMI NSEEFY LG+ Y W
Sbjct: 293 EQFCITEP--EKSWEMFDEMIANSEEFYKALGLPYLT--------------------W-- 328
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACATTRVICAILETHQTETGVRIP 199
G ++ELVSCSNC + L +T AT+R +CA+LE +QTE G ++P
Sbjct: 329 -KGEYKELVSCSNCTKKEYVHCL----------NSTLTATSRTMCALLENYQTEDGFKVP 377
Query: 200 DCLRKFVPAVYLNEAGE-IPFVKTAPID 226
+ LRK++P A E IPF K P D
Sbjct: 378 EPLRKYLPG-----APEFIPFTKELPKD 400
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 92/171 (53%), Gaps = 50/171 (29%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G FRVHQFEKVEQF +T P ++SW+ DEMI NSEEFY LG+ Y
Sbjct: 279 DVWGTFRVHQFEKVEQFCITEP--EKSWEMFDEMIANSEEFYKALGLPYLT--------- 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
W G ++ELVSCSNC TKK E+VH LN+T
Sbjct: 328 -----------W---KGEYKELVSCSNC--------------TKK-----EYVHCLNSTL 354
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE-IPFVKTAPID 472
AT+R +CA+LE +QTE G ++P+ LRK++P A E IPF K P D
Sbjct: 355 TATSRTMCALLENYQTEDGFKVPEPLRKYLPG-----APEFIPFTKELPKD 400
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Query: 251 QVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADL 302
+ G HGRD G FRVHQFEKVEQF +T P ++SW+M DEMI NSEEFY L
Sbjct: 272 EAGGHGRDVWGTFRVHQFEKVEQFCITEP--EKSWEMFDEMIANSEEFYKAL 321
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DKYLIATSEQPI H + WL LP+RY G STCFR+E
Sbjct: 233 DKYLIATSEQPISVYHANEWLLPQDLPLRYAGYSTCFRKEA 273
>gi|291438592|ref|ZP_06577982.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291341487|gb|EFE68443.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 425
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 123/194 (63%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P +ES +++ +++ L + +RV+++ SG L +AA+K D EAW
Sbjct: 283 VEMFSYVAP--EESQAEHQRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKYDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQ---KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R G+T + + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLQIRVRDGKTVRPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P +ES +++ +++ L + +RV+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAP--EESQAEHQRLLEWEKQWLTSLELPFRVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +QSRRL +R K + + LN T
Sbjct: 328 SSAARKYDCEAWIPTQGKYRELTSTSDCTEFQSRRLQIRVRDGKTVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPYL 414
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEIIDADRLPLRYAGFSPCFRREA 264
>gi|323358560|ref|YP_004224956.1| seryl-tRNA synthetase [Microbacterium testaceum StLB037]
gi|323274931|dbj|BAJ75076.1| seryl-tRNA synthetase [Microbacterium testaceum StLB037]
Length = 421
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 120/201 (59%), Gaps = 8/201 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YL+ TSE P+ H D L RY G STC+R E GS+G+DTRGI RVHQF K
Sbjct: 220 EDLYLVGTSEVPLAGYHMDEILDLERGAKRYAGWSTCYRSEAGSYGKDTRGIIRVHQFNK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E FV T P D E+ D ++ E DLG+AYRV+++ +G L +AA+K D+EAW
Sbjct: 280 LEMFVYTDPADAEAEH--DRLVAMQEAMLQDLGLAYRVIDVAAGDLGSSAARKFDIEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P A+REL S SNC YQ+RRL R+ K A ATTR I A+LETHQ E
Sbjct: 338 PTQDAYRELTSTSNCTTYQARRLNTRFRPEGSKTAPVATLNGTLATTRWIVALLETHQRE 397
Query: 194 TG-VRIPDCLRKFVPAVYLNE 213
G V +P+ LR ++ + + E
Sbjct: 398 DGSVTVPEVLRPYLGGLEVME 418
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 97/158 (61%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF K+E FV T P D E+ D ++ E DLG+AYRV+++ +G L
Sbjct: 267 DTRGIIRVHQFNKLEMFVYTDPADAEAEH--DRLVAMQEAMLQDLGLAYRVIDVAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D+EAW P A+REL S SNC YQ+RRL R+ + K V LN T
Sbjct: 325 SSAARKFDIEAWVPTQDAYRELTSTSNCTTYQARRLNTRF---RPEGSKTAPVATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
ATTR I A+LETHQ E G V +P+ LR ++ + V E
Sbjct: 381 LATTRWIVALLETHQREDGSVTVPEVLRPYLGGLEVME 418
>gi|294630258|ref|ZP_06708818.1| seryl-tRNA synthetase [Streptomyces sp. e14]
gi|292833591|gb|EFF91940.1| seryl-tRNA synthetase [Streptomyces sp. e14]
Length = 425
Score = 176 bits (445), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + A H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVALAAYHMDEIIDAERLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P +ES + +++ +++ L + +RV+++ SG L +AA+K D EAW
Sbjct: 283 VEMFSYVTP--EESQEEHRRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R KQ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLSIRVRDGKQVRPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P +ES + +++ +++ L + +RV+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVTP--EESQEEHRRLLEWEKQWLTSLELPFRVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +QSRRL +R K++ + LN T
Sbjct: 328 SSAARKFDCEAWIPTQGKYRELTSTSDCTEFQSRRLSIRVRDGKQVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I AILE HQ G VR+P+ LR ++ V E
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVLE 421
Score = 47.4 bits (111), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGM--CRTYFHVTCAQR 592
DD YL+ TSE + A H D + LP+RY G S CFR+E + R F V +
Sbjct: 223 DDLYLVGTSEVALAAYHMDEIIDAERLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 593 EGLLSEATSEE 603
+ S T EE
Sbjct: 283 VEMFSYVTPEE 293
>gi|407985542|ref|ZP_11166135.1| serine--tRNA ligase [Mycobacterium hassiacum DSM 44199]
gi|407372887|gb|EKF21910.1| serine--tRNA ligase [Mycobacterium hassiacum DSM 44199]
Length = 419
Score = 176 bits (445), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 123/204 (60%), Gaps = 8/204 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L + P+RY G+STCFR+E GSHG+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHADEILDLSGGPLRYAGLSTCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F+ +P DE+ ++ + A + + YRV++I +G L +AA+K D EA
Sbjct: 277 DKVEGFIYCTP--DEAEAEHQRLLDWQRQMLAKIEVPYRVIDIAAGDLGASAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL VRY K +I AT ATTR + AILE HQ
Sbjct: 335 WIPSQQTYRELTSTSNCTTFQARRLAVRYRDENGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLNEA 214
G VR+P+ L FV L A
Sbjct: 395 QPDGSVRVPEALVPFVGTEVLTPA 418
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ +P DE+ ++ + A + + YRV++I +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCTP--DEAEAEHQRLLDWQRQMLAKIEVPYRVIDIAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 ASAARKFDCEAWIPSQQTYRELTSTSNCTTFQARRLAVRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P+ L FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPEALVPFV 410
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L + P+RY G+STCFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHADEILDLSGGPLRYAGLSTCFRREA 260
>gi|455648224|gb|EMF27104.1| seryl-tRNA ligase [Streptomyces gancidicus BKS 13-15]
Length = 425
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + A H D L LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVALAAYHMDEILEADKLPMRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D S + +++ +++ L + +RV+++ SG L +AA+K D EAW
Sbjct: 283 VEMFSYVAPED--SQEEHKRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKYDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R + K+ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLQIRVREDKKVRPLATLNGTLCAVPRTIVAILENHQQP 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D S + +++ +++ L + +RV+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPED--SQEEHKRLLEWEKQWLTSLELPFRVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +QSRRL +R + KK+ + LN T
Sbjct: 328 SSAARKYDCEAWIPTQGKYRELTSTSDCTEFQSRRLQIRVREDKKVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQQPDGSVRVPEVLRPYL 414
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + A H D L LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVALAAYHMDEILEADKLPMRYAGFSPCFRREA 264
>gi|333025791|ref|ZP_08453855.1| putative serine-tRNA ligase [Streptomyces sp. Tu6071]
gi|332745643|gb|EGJ76084.1| putative serine-tRNA ligase [Streptomyces sp. Tu6071]
Length = 429
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D E+ +++ +++ LG+ +RV+++ +G L +AA+K D EAW
Sbjct: 283 VEMFTYVAPEDSEAEHR--RLLEWEKQWLTSLGLPFRVIDVATGDLGSSAARKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++Q+RRL +R K+ + T CA R I A+LE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRPLATLNGTLCAVPRTIVALLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ LG+ +RV+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFTYVAPEDSEAEHR--RLLEWEKQWLTSLGLPFRVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +Q+RRL +R KK + LN T
Sbjct: 328 SSAARKFDCEAWIPTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I A+LE HQ G VR+P+ LR ++ V E
Sbjct: 384 CAVPRTIVALLENHQQADGSVRVPEVLRPYLGGREVLE 421
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H D + LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREA 264
>gi|318061333|ref|ZP_07980054.1| seryl-tRNA synthetase [Streptomyces sp. SA3_actG]
gi|318078670|ref|ZP_07986002.1| seryl-tRNA synthetase [Streptomyces sp. SA3_actF]
Length = 416
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 210 DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 269
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D E+ +++ +++ LG+ +RV+++ +G L +AA+K D EAW
Sbjct: 270 VEMFTYVAPEDSEAEHR--RLLEWEKQWLTSLGLPFRVIDVATGDLGSSAARKFDCEAWI 327
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++Q+RRL +R K+ + T CA R I A+LE HQ
Sbjct: 328 PTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRPLATLNGTLCAVPRTIVALLENHQQA 387
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 388 DGSVRVPEVLRPYL 401
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ LG+ +RV+++ +G L
Sbjct: 257 DTRGIFRVHQFDKVEMFTYVAPEDSEAEHR--RLLEWEKQWLTSLGLPFRVIDVATGDLG 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +Q+RRL +R KK + LN T
Sbjct: 315 SSAARKFDCEAWIPTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRP----LATLNGTL 370
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I A+LE HQ G VR+P+ LR ++ V E
Sbjct: 371 CAVPRTIVALLENHQQADGSVRVPEVLRPYLGGREVLE 408
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H D + LP+RY G S CFR+E
Sbjct: 210 DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREA 251
>gi|296166962|ref|ZP_06849378.1| serine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897701|gb|EFG77291.1| serine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 434
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 121/206 (58%), Gaps = 10/206 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 232 EADDLYLVGTSEVPLAGYHADEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 291
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E+ ++ E A +G+ YRV+++ +G L +AA+K D EA
Sbjct: 292 DKVEGFVYCKPADAEAEHQ--RLLGWQREMLARIGVPYRVIDVAAGDLGSSAARKFDCEA 349
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETH 190
W P G +REL S SNC +Q+RRL RY QT + T TTR + AILE H
Sbjct: 350 WVPTQGTYRELTSTSNCTTFQARRLATRYRDDGGKPQTAATLNGT-LGTTRWLVAILENH 408
Query: 191 QTETG-VRIPDCLRKFVPAVYLNEAG 215
Q G VR+P+ L FV L AG
Sbjct: 409 QQPDGSVRVPEALVPFVGTELLEPAG 434
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 91/160 (56%), Gaps = 7/160 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ ++ E A +G+ YRV+++ +G L
Sbjct: 281 DTRGIIRVHQFDKVEGFVYCKPADAEAEH--QRLLGWQREMLARIGVPYRVIDVAAGDLG 338
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + K + LN T
Sbjct: 339 SSAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLATRY---RDDGGKPQTAATLNGT- 394
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAG 461
TTR + AILE HQ G VR+P+ L FV + AG
Sbjct: 395 LGTTRWLVAILENHQQPDGSVRVPEALVPFVGTELLEPAG 434
Score = 48.1 bits (113), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L + P+RY G S+CFR+E
Sbjct: 232 EADDLYLVGTSEVPLAGYHADEILDLSGGPLRYAGWSSCFRREA 275
>gi|256389475|ref|YP_003111039.1| seryl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
gi|256355701|gb|ACU69198.1| seryl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
Length = 425
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D L A LP+RY G S+C+R+E GS+G+DTRGI RVHQFEK
Sbjct: 223 DDMYLVGTSEVPLAAYHMDEILDAAKLPLRYAGYSSCYRREAGSYGKDTRGIIRVHQFEK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P + E+ + ++ +EF L I +RV+++ +G L +AA+K D EAW
Sbjct: 283 VEMFSYVLPEEAEAEHL--RLLGWEKEFLTALEIPFRVIDVAAGDLGSSAARKYDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK----IYATACATTRVICAILETHQTE 193
P G +RE+ S SNC ++Q+RRL +R G K + T CA TR+I AILE HQ
Sbjct: 341 PTQGKYREVTSTSNCTEFQARRLQIRMRGADGVKPLATLNGTLCAMTRMIVAILENHQNA 400
Query: 194 TG-VRIPDCLRKFV 206
G V +P LR ++
Sbjct: 401 DGSVTVPAALRPYL 414
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQFEKVE F P + E+ ++ +EF L I +RV+++ +G L
Sbjct: 270 DTRGIIRVHQFEKVEMFSYVLPEEAEAEHL--RLLGWEKEFLTALEIPFRVIDVAAGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +RE+ S SNC +Q+RRL +R + + ++ + LN T
Sbjct: 328 SSAARKYDCEAWIPTQGKYREVTSTSNCTEFQARRLQIRM----RGADGVKPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I AILE HQ G V +P LR ++
Sbjct: 384 CAMTRMIVAILENHQNADGSVTVPAALRPYL 414
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D L A LP+RY G S+C+R+E
Sbjct: 223 DDMYLVGTSEVPLAAYHMDEILDAAKLPLRYAGYSSCYRREA 264
>gi|418467887|ref|ZP_13038746.1| seryl-tRNA synthetase [Streptomyces coelicoflavus ZG0656]
gi|371551499|gb|EHN78788.1| seryl-tRNA synthetase [Streptomyces coelicoflavus ZG0656]
Length = 412
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D L LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 210 DDLYLVGTSEVPLAAYHMDEILDAERLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 269
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D ++ +++ +++ L + +RV+++ S L +AA+K D EAW
Sbjct: 270 VEMFSYVLPEDTQAEHQ--RLLEWEKQWLTSLELPFRVIDVASADLGSSAARKYDCEAWI 327
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R + K+ + T CA R I AILE HQ
Sbjct: 328 PTQGKYRELTSTSDCTEFQSRRLSIRVREGKKVRPLATLNGTLCAVPRTIVAILENHQQA 387
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 388 DGSVRVPEVLRPYL 401
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D ++ +++ +++ L + +RV+++ S L
Sbjct: 257 DTRGIFRVHQFDKVEMFSYVLPEDTQAEH--QRLLEWEKQWLTSLELPFRVIDVASADLG 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +QSRRL +R + KK+ + LN T
Sbjct: 315 SSAARKYDCEAWIPTQGKYRELTSTSDCTEFQSRRLSIRVREGKKVRP----LATLNGTL 370
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I AILE HQ G VR+P+ LR ++ V E
Sbjct: 371 CAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVLE 408
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 210 DDLYLVGTSEVPLAAYHMDEILDAERLPLRYAGFSPCFRREA 251
>gi|21222366|ref|NP_628145.1| seryl-tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|289770434|ref|ZP_06529812.1| seryl-tRNA synthetase [Streptomyces lividans TK24]
gi|8928384|sp|Q9ZBX1.1|SYS_STRCO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|3928737|emb|CAA22233.1| seryl-tRNA synthase [Streptomyces coelicolor A3(2)]
gi|289700633|gb|EFD68062.1| seryl-tRNA synthetase [Streptomyces lividans TK24]
Length = 425
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ A H D L LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILDGDRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D ++ +++ +++ L + +RV+++ S L +AA+K D EAW
Sbjct: 283 VEMFSYVLPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASADLGSSAARKYDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R + K+ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLSIRVREGKKVRPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D ++ +++ +++ L + +RV+++ S L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVLPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASADLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +QSRRL +R + KK+ + LN T
Sbjct: 328 SSAARKYDCEAWIPTQGKYRELTSTSDCTEFQSRRLSIRVREGKKVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I AILE HQ G VR+P+ LR ++ V E
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVLE 421
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVPLAAYHMDEILDGDRLPLRYAGFSPCFRREA 264
>gi|386384946|ref|ZP_10070278.1| seryl-tRNA synthetase [Streptomyces tsukubaensis NRRL18488]
gi|385667588|gb|EIF90999.1| seryl-tRNA synthetase [Streptomyces tsukubaensis NRRL18488]
Length = 425
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P D E+ +++ +++ L + ++V+++ S L +A++K D EA
Sbjct: 281 DKVEMFSYVAPEDAEAEHR--RLLEWEKQWLTSLELPFQVIDVASADLGSSASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VRY K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRYRDGKKTQPVATLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LADGSVRVPEALRPYL 414
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ L + ++V+++ S L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDAEAEHR--RLLEWEKQWLTSLELPFQVIDVASADLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VRY KK V LN T
Sbjct: 328 SSASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRYRDGKKTQP----VATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQLADGSVRVPEALRPYL 414
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDAEKLPLRYAGFSPCFRREA 264
>gi|400534954|ref|ZP_10798491.1| seryl-tRNA ligase [Mycobacterium colombiense CECT 3035]
gi|400331312|gb|EJO88808.1| seryl-tRNA ligase [Mycobacterium colombiense CECT 3035]
Length = 419
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 122/201 (60%), Gaps = 8/201 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHSDEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E+ ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEAEHQ--RLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P GA+REL S SNC +Q+RRL RY G K + AT TTR + AILE HQ
Sbjct: 335 WVPTQGAYRELTSTSNCTTFQARRLATRYRDGAGKPQTAATLNGTLGTTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYL 211
G VR+P+ L FV A L
Sbjct: 395 RPDGSVRVPEALVPFVGAEVL 415
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 90/153 (58%), Gaps = 7/153 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E+ ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCTPADAEAEH--QRLLGWQREMLALIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P GA+REL S SNC +Q+RRL RY + K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQGAYRELTSTSNCTTFQARRLATRY---RDGAGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
TTR + AILE HQ G VR+P+ L FV A
Sbjct: 380 LGTTRWLVAILENHQRPDGSVRVPEALVPFVGA 412
Score = 48.5 bits (114), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L + P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHSDEILDLSGGPLRYAGWSSCFRREA 260
>gi|302520443|ref|ZP_07272785.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Streptomyces sp. SPB78]
gi|302429338|gb|EFL01154.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Streptomyces sp. SPB78]
Length = 348
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 142 DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 201
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D E+ +++ +++ LG+ +RV+++ +G L +AA+K D EAW
Sbjct: 202 VEMFTYVAPEDSEAEHR--RLLEWEKQWLTSLGLPFRVIDVATGDLGSSAARKFDCEAWI 259
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++Q+RRL +R K+ + T CA R I A+LE HQ
Sbjct: 260 PTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRPLATLNGTLCAVPRTIVALLENHQQA 319
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 320 DGSVRVPEVLRPYL 333
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ LG+ +RV+++ +G L
Sbjct: 189 DTRGIFRVHQFDKVEMFTYVAPEDSEAEHR--RLLEWEKQWLTSLGLPFRVIDVATGDLG 246
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S S+C +Q+RRL +R KK + LN T
Sbjct: 247 SSAARKFDCEAWIPTQGKYRELTSTSDCTEFQARRLSIRMRDGKKTRP----LATLNGTL 302
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I A+LE HQ G VR+P+ LR ++
Sbjct: 303 CAVPRTIVALLENHQQADGSVRVPEVLRPYL 333
Score = 44.7 bits (104), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H D + LP+RY G S CFR+E
Sbjct: 142 DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREA 183
>gi|383829416|ref|ZP_09984505.1| seryl-tRNA synthetase [Saccharomonospora xinjiangensis XJ-54]
gi|383462069|gb|EID54159.1| seryl-tRNA synthetase [Saccharomonospora xinjiangensis XJ-54]
Length = 421
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 121/201 (60%), Gaps = 8/201 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L P+RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHADEILDLTGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P D E+ + ++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 280 VEMFVFCDPSDAEAEH--ERLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P A+REL S SNC YQ+RRL VRY + + A ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTYQARRLSVRYRDAEGRPQTAATLNGTLATTRWIVAILENHQQP 397
Query: 194 TG-VRIPDCLRKFVPAVYLNE 213
G VR+P+ LR F+ + + E
Sbjct: 398 DGSVRVPEALRPFLGGLSVLE 418
Score = 129 bits (324), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ + ++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVFCDPSDAEAEH--ERLLAWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC YQ+RRL VRY + + + LN T
Sbjct: 325 TSAARKYDCEAWVPTQQAYRELTSTSNCTTYQARRLSVRY---RDAEGRPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
ATTR I AILE HQ G VR+P+ LR F+ + V E
Sbjct: 381 LATTRWIVAILENHQQPDGSVRVPEALRPFLGGLSVLE 418
Score = 46.2 bits (108), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L P+RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHADEILDLTGGPLRYAGWSSCFRREA 261
>gi|271961743|ref|YP_003335939.1| serine--tRNA ligase [Streptosporangium roseum DSM 43021]
gi|270504918|gb|ACZ83196.1| Serine--tRNA ligase [Streptosporangium roseum DSM 43021]
Length = 420
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 118/196 (60%), Gaps = 12/196 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +L+ TSE P+ A H D L SLP RY G STCFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLFLVGTSEVPMAAYHADEILDGGSLPYRYAGWSTCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHD--DESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
VE F T P D +E ++LD +E A + + YRV++I G L +AA+K D EA
Sbjct: 280 VEMFSYTRPEDAHEEHLRLLD----WEKEMLAKVELPYRVIDIAGGDLGVSAARKFDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +RE+ S SNC +Q+RRL VRY K A ATTR I AILE HQ
Sbjct: 336 WLPTQGQYREVTSTSNCTGFQARRLAVRYRDKDGKPQHVATLNGTLATTRWIAAILENHQ 395
Query: 192 TETG-VRIPDCLRKFV 206
G V +P LR +V
Sbjct: 396 QADGSVVVPKALRPYV 411
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 91/153 (59%), Gaps = 11/153 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHD--DESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGA 360
DTRGI RVHQF+KVE F T P D +E + LD +E A + + YRV++I G
Sbjct: 267 DTRGIIRVHQFDKVEMFSYTRPEDAHEEHLRLLDW----EKEMLAKVELPYRVIDIAGGD 322
Query: 361 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
L +AA+K D EAW P G +RE+ S SNC +Q+RRL VRY + + K + V LN
Sbjct: 323 LGVSAARKFDCEAWLPTQGQYREVTSTSNCTGFQARRLAVRY---RDKDGKPQHVATLNG 379
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKFV 452
T ATTR I AILE HQ G V +P LR +V
Sbjct: 380 T-LATTRWIAAILENHQQADGSVVVPKALRPYV 411
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD +L+ TSE P+ A H D L SLP RY G STCFR+E
Sbjct: 220 DDLFLVGTSEVPMAAYHADEILDGGSLPYRYAGWSTCFRREA 261
>gi|374326838|ref|YP_005085038.1| seryl-tRNA synthetase [Pyrobaculum sp. 1860]
gi|356642107|gb|AET32786.1| seryl-tRNA synthetase [Pyrobaculum sp. 1860]
Length = 451
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 127/219 (57%), Gaps = 20/219 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A L E LP Y+G S CFR+E G+ RD +GIFRVH
Sbjct: 236 KIEGEDLYLIATAEHGIAAYLYKRDLVEEELPQLYVGWSPCFRKEAGAGSRDIKGIFRVH 295
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
F KVEQFV + P D SWK +E+ +N+EE LG+ YRVVNI + L AAKK D+
Sbjct: 296 IFHKVEQFVFSLPED--SWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGSPAAKKYDI 353
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIYATAC---ATTRVICAILE 188
E W+P G +REL SCSN D+QS RL + R G ++ ++ C ATTR I AILE
Sbjct: 354 EVWYPAQGMYRELASCSNVTDWQSYRLGIRVTRKGMRREYVHTLNCTGLATTRTITAILE 413
Query: 189 THQTETG-VRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226
Q E G V IP LR ++ +KTAP D
Sbjct: 414 NFQREDGAVEIPKALRPYLEP-----------IKTAPKD 441
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 100/171 (58%), Gaps = 17/171 (9%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVH F KVEQFV + P D SWK +E+ +N+EE LG+ YRVVNI + L
Sbjct: 287 DIKGIFRVHIFHKVEQFVFSLPED--SWKWHEEITKNTEELIRGLGLPYRVVNICAHDLG 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W+P G +REL SCSN +QS RL +R + + E+VH LN T
Sbjct: 345 SPAAKKYDIEVWYPAQGMYRELASCSNVTDWQSYRLGIR---VTRKGMRREYVHTLNCTG 401
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472
ATTR I AILE Q E G V IP LR ++ +KTAP D
Sbjct: 402 LATTRTITAILENFQREDGAVEIPKALRPYLEP-----------IKTAPKD 441
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E I A L E LP Y+G S CFR+E AG
Sbjct: 236 KIEGEDLYLIATAEHGIAAYLYKRDLVEEELPQLYVGWSPCFRKEAGAG 284
>gi|385651147|ref|ZP_10045700.1| seryl-tRNA ligase [Leucobacter chromiiresistens JG 31]
Length = 423
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 116/193 (60%), Gaps = 8/193 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +L TSE + H D + A PIRY G STC+R E GSHG+DTRGI RVHQF K+
Sbjct: 221 DLFLTGTSEVALAGYHADEIIDVAGGPIRYAGWSTCYRSEAGSHGKDTRGILRVHQFNKL 280
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E FV T P + E+ + ++ EE LG+ YRV+++ +G L +AA+K D+EAW P
Sbjct: 281 EMFVYTDPAEAEAEH--ERLVGWQEEILQALGLHYRVIDVAAGDLGSSAARKFDIEAWVP 338
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTET 194
A+REL S SNC YQSRRL RY K A A ATTR I AILETHQ
Sbjct: 339 TQDAYRELTSTSNCTTYQSRRLSTRYRTESGKTAAVATLNGTLATTRWIVAILETHQQAD 398
Query: 195 G-VRIPDCLRKFV 206
G V +P+ LR ++
Sbjct: 399 GSVIVPEALRPYL 411
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 95/156 (60%), Gaps = 7/156 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF K+E FV T P + E+ + ++ EE LG+ YRV+++ +G L
Sbjct: 267 DTRGILRVHQFNKLEMFVYTDPAEAEAEH--ERLVGWQEEILQALGLHYRVIDVAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D+EAW P A+REL S SNC YQSRRL RY + + K V LN T
Sbjct: 325 SSAARKFDIEAWVPTQDAYRELTSTSNCTTYQSRRLSTRY---RTESGKTAAVATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
ATTR I AILETHQ G V +P+ LR ++ + V
Sbjct: 381 LATTRWIVAILETHQQADGSVIVPEALRPYLGGLDV 416
>gi|375098490|ref|ZP_09744753.1| seryl-tRNA synthetase [Saccharomonospora cyanea NA-134]
gi|374659222|gb|EHR59100.1| seryl-tRNA synthetase [Saccharomonospora cyanea NA-134]
Length = 421
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 124/201 (61%), Gaps = 8/201 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L + P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEILDLTAGPQRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P D E+ + ++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 280 VEMFVFCEPSDAEAEH--ERLLAWEEEMLAKIEVPYRVIDTAAGDLGSSAARKYDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQT--KQKIYAT---ACATTRVICAILETHQTE 193
P A+REL S SNC YQ+RRL VRY + + ++ AT ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTYQARRLSVRYRDSDGRPQVAATLNGTLATTRWIVAILENHQQA 397
Query: 194 TG-VRIPDCLRKFVPAVYLNE 213
G VR+P+ LR F+ + + E
Sbjct: 398 DGSVRVPEALRPFLGGLSVLE 418
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ + ++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVFCEPSDAEAEH--ERLLAWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC YQ+RRL VRY + + + + LN T
Sbjct: 325 SSAARKYDCEAWVPTQQAYRELTSTSNCTTYQARRLSVRY---RDSDGRPQVAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
ATTR I AILE HQ G VR+P+ LR F+ + V E
Sbjct: 381 LATTRWIVAILENHQQADGSVRVPEALRPFLGGLSVLE 418
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L + P RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEILDLTAGPQRYAGWSSCFRREA 261
>gi|302535646|ref|ZP_07287988.1| seryl-tRNA synthetase [Streptomyces sp. C]
gi|302444541|gb|EFL16357.1| seryl-tRNA synthetase [Streptomyces sp. C]
Length = 425
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P D E+ +++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVAPEDAEAEH--KRLLEWEKQWLTSLELPFQVIDVATGDLGASASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL +RY K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLAIRYRDGKKTAPLSTLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P LR ++
Sbjct: 399 QADGSVRVPPVLRPYL 414
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDAEAEHK--RLLEWEKQWLTSLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL +RY KK + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLAIRYRDGKKTAP----LSTLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P LR ++
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPPVLRPYL 414
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDAEKLPLRYAGFSPCFRREA 264
>gi|429201624|ref|ZP_19193076.1| serine--tRNA ligase [Streptomyces ipomoeae 91-03]
gi|428662816|gb|EKX62220.1| serine--tRNA ligase [Streptomyces ipomoeae 91-03]
Length = 425
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 119/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + A H D L LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVALAAYHMDEILDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D ++ +++ +++ L + +RV+++ S L +A++K D EAW
Sbjct: 283 VEMFSYVAPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASADLGSSASRKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R KQ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLQIRVRDGKQVKPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEILRPYL 414
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D ++ +++ +++ L + +RV+++ S L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ--RLLEWEKQWLTSLELPFRVIDVASADLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S S+C +QSRRL +R K +++ + LN T
Sbjct: 328 SSASRKFDCEAWIPTQGKYRELTSTSDCTEFQSRRLQIRVRDGK----QVKPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEILRPYL 414
Score = 47.0 bits (110), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + A H D L LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVALAAYHMDEILDADRLPLRYAGFSPCFRREA 264
>gi|421744738|ref|ZP_16182690.1| seryl-tRNA synthetase [Streptomyces sp. SM8]
gi|406686853|gb|EKC90922.1| seryl-tRNA synthetase [Streptomyces sp. SM8]
Length = 410
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 122/198 (61%), Gaps = 12/198 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 208 EKDDFYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 267
Query: 77 EKVEQFVLTSPHDDES--WKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
+KVE F P D E+ ++LD IQ + L + ++V+++ S L +A++K D
Sbjct: 268 DKVEMFSYVEPEDAEAEHQRLLDWEIQ----WLQSLELPFQVIDVASADLGSSASRKFDC 323
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILET 189
EAW P G +REL S SNC ++Q+RRL VR + K+ + T CA R I AILE
Sbjct: 324 EAWIPTQGKYRELTSTSNCTEFQARRLSVRMREGKKVQPLATLNGTLCAVPRTIVAILEN 383
Query: 190 HQTETG-VRIPDCLRKFV 206
HQ G VR+P+ LR ++
Sbjct: 384 HQQADGSVRVPEVLRPYL 401
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 92/153 (60%), Gaps = 11/153 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDES--WKTLDEMIQNSEEFYADLGIAYRVVNIVSGA 360
DTRGIFRVHQF+KVE F P D E+ + LD IQ + L + ++V+++ S
Sbjct: 257 DTRGIFRVHQFDKVEMFSYVEPEDAEAEHQRLLDWEIQ----WLQSLELPFQVIDVASAD 312
Query: 361 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
L +A++K D EAW P G +REL S SNC +Q+RRL VR + K K++ + LN
Sbjct: 313 LGSSASRKFDCEAWIPTQGKYRELTSTSNCTEFQARRLSVRMREGK----KVQPLATLNG 368
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKFV 452
T CA R I AILE HQ G VR+P+ LR ++
Sbjct: 369 TLCAVPRTIVAILENHQQADGSVRVPEVLRPYL 401
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 208 EKDDFYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREA 251
>gi|408530802|emb|CCK28976.1| Seryl-tRNA synthetase 1 [Streptomyces davawensis JCM 4913]
Length = 412
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 208 EKDDYYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 267
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P D E+ +++ +++ L + ++V+++ SG L +A++K D EA
Sbjct: 268 DKVEMFSYVAPEDAENEH--KRLLEWEKQWLTGLELPFQVIDVASGDLGASASRKFDCEA 325
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR K+ + T CA R I AILE HQ
Sbjct: 326 WIPTQGKYRELTSASNCDGFQARRLSVRMRDGKKVQPLATLNGTLCAVPRTIVAILENHQ 385
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 386 LADGSVRVPEVLRPYL 401
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ L + ++V+++ SG L
Sbjct: 257 DTRGIFRVHQFDKVEMFSYVAPEDAENEHK--RLLEWEKQWLTGLELPFQVIDVASGDLG 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K K++ + LN T
Sbjct: 315 ASASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTL 370
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 371 CAVPRTIVAILENHQLADGSVRVPEVLRPYL 401
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 208 EKDDYYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCFRREA 251
>gi|359150743|ref|ZP_09183562.1| seryl-tRNA synthetase [Streptomyces sp. S4]
Length = 423
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 122/198 (61%), Gaps = 12/198 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDES--WKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
+KVE F P D E+ ++LD IQ + L + ++V+++ S L +A++K D
Sbjct: 281 DKVEMFSYVEPEDAEAEHQRLLDWEIQ----WLQSLELPFQVIDVASADLGSSASRKFDC 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILET 189
EAW P G +REL S SNC ++Q+RRL VR + K+ + T CA R I AILE
Sbjct: 337 EAWIPTQGKYRELTSTSNCTEFQARRLSVRMREGKKVQPLATLNGTLCAVPRTIVAILEN 396
Query: 190 HQTETG-VRIPDCLRKFV 206
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 92/153 (60%), Gaps = 11/153 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDES--WKTLDEMIQNSEEFYADLGIAYRVVNIVSGA 360
DTRGIFRVHQF+KVE F P D E+ + LD IQ + L + ++V+++ S
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVEPEDAEAEHQRLLDWEIQ----WLQSLELPFQVIDVASAD 325
Query: 361 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
L +A++K D EAW P G +REL S SNC +Q+RRL VR + K K++ + LN
Sbjct: 326 LGSSASRKFDCEAWIPTQGKYRELTSTSNCTEFQARRLSVRMREGK----KVQPLATLNG 381
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKFV 452
T CA R I AILE HQ G VR+P+ LR ++
Sbjct: 382 TLCAVPRTIVAILENHQQADGSVRVPEVLRPYL 414
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREA 264
>gi|291452730|ref|ZP_06592120.1| seryl-tRNA synthetase [Streptomyces albus J1074]
gi|291355679|gb|EFE82581.1| seryl-tRNA synthetase [Streptomyces albus J1074]
Length = 423
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 122/198 (61%), Gaps = 12/198 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDES--WKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
+KVE F P D E+ ++LD IQ + L + ++V+++ S L +A++K D
Sbjct: 281 DKVEMFSYVEPEDAEAEHQRLLDWEIQ----WLQSLELPFQVIDVASADLGSSASRKFDC 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILET 189
EAW P G +REL S SNC ++Q+RRL VR + K+ + T CA R I AILE
Sbjct: 337 EAWIPTQGKYRELTSTSNCTEFQARRLSVRMREGKKVQPLATLNGTLCAVPRTIVAILEN 396
Query: 190 HQTETG-VRIPDCLRKFV 206
HQ G VR+P+ LR ++
Sbjct: 397 HQQADGSVRVPEVLRPYL 414
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 92/153 (60%), Gaps = 11/153 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDES--WKTLDEMIQNSEEFYADLGIAYRVVNIVSGA 360
DTRGIFRVHQF+KVE F P D E+ + LD IQ + L + ++V+++ S
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVEPEDAEAEHQRLLDWEIQ----WLQSLELPFQVIDVASAD 325
Query: 361 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
L +A++K D EAW P G +REL S SNC +Q+RRL VR + K K++ + LN
Sbjct: 326 LGSSASRKFDCEAWIPTQGKYRELTSTSNCTEFQARRLSVRMREGK----KVQPLATLNG 381
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKFV 452
T CA R I AILE HQ G VR+P+ LR ++
Sbjct: 382 TLCAVPRTIVAILENHQQADGSVRVPEVLRPYL 414
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREA 264
>gi|306837119|ref|ZP_07470056.1| serine--tRNA ligase [Corynebacterium accolens ATCC 49726]
gi|304566967|gb|EFM42595.1| serine--tRNA ligase [Corynebacterium accolens ATCC 49726]
Length = 418
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 117/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + H+D + ++ P++Y G S+CFR+E GSHG+DTRGI RVHQF+K
Sbjct: 219 DDRYLVGTSEVALAGYHKDEIIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E FV P D E M +++ +E A + + YR ++I G L +AA+K D EAW
Sbjct: 279 LEMFVYCKPEDAED--MHQKLLDMEKEMLAAMELPYRTIDIAGGDLGSSAARKFDNEAWV 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P G +REL S SNC +Q+RRL RY K A ATTR I AILE HQ
Sbjct: 337 PTQGTYRELTSTSNCTTFQARRLSTRYRDENGKTQVAATLNGTLATTRWIVAILENHQQA 396
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 397 DGSVVVPEALRPFV 410
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D E +++ +E A + + YR ++I G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCKPEDAEDMHQ--KLLDMEKEMLAAMELPYRTIDIAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKFDNEAWVPTQGTYRELTSTSNCTTFQARRLSTRY---RDENGKTQVAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V +P+ LR FV
Sbjct: 380 LATTRWIVAILENHQQADGSVVVPEALRPFV 410
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 455 VYVNEAGEIPFVKTAPIDEEETKK-------QKKQKEGMKKKVLI--DEAMIQNEKDLIA 505
V V E GEIP P D E + ++ K G + + D A +Q ++A
Sbjct: 118 VLVEEVGEIPHFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLMLA 177
Query: 506 TEKERNNALR----------EVIGKGEKVGDSAPEKDEL--DDKYLIATSEQPICAVHRD 553
+K R + E++ +G + E L DD+YL+ TSE + H+D
Sbjct: 178 AQKAREAGFQLMIPPVLVRPEIMSGTGFLGQHSDEIYYLPADDRYLVGTSEVALAGYHKD 237
Query: 554 SWLPEASLPIRYLGVSTCFRQEC 576
+ ++ P++Y G S+CFR+E
Sbjct: 238 EIIDLSNGPLQYAGWSSCFRREA 260
>gi|119872042|ref|YP_930049.1| seryl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
gi|166223276|sp|A1RRX4.1|SYS_PYRIL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119673450|gb|ABL87706.1| seryl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
Length = 448
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 123/202 (60%), Gaps = 9/202 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A L E LP+ ++G S CFR+E G+ RD +GIFRVH
Sbjct: 235 KIEGEDLYLIATAEHGIAAYLYKRELVEDELPLLFVGWSPCFRKEAGAGSRDLKGIFRVH 294
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
F KVEQFV + P D SW+ +E+ +N+EE DLG+ YRVVNI + L AAKK D+
Sbjct: 295 IFHKVEQFVFSLPED--SWRWHEEITKNTEELIKDLGLPYRVVNICAHDLGAPAAKKYDI 352
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIYATAC---ATTRVICAILE 188
E W+P +REL SCSN D+QS RL + R G ++ ++ C ATTR I AILE
Sbjct: 353 EVWYPAQSMYRELASCSNVTDWQSYRLGIRVTRKGMRREFVHTLNCTGLATTRTITAILE 412
Query: 189 THQTETG-VRIPDCLRKFVPAV 209
Q E G V IP LR ++ +
Sbjct: 413 NFQREDGVVEIPKVLRPYLEPI 434
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 95/154 (61%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVH F KVEQFV + P D SW+ +E+ +N+EE DLG+ YRVVNI + L
Sbjct: 286 DLKGIFRVHIFHKVEQFVFSLPED--SWRWHEEITKNTEELIKDLGLPYRVVNICAHDLG 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W+P +REL SCSN +QS RL +R + + EFVH LN T
Sbjct: 344 APAAKKYDIEVWYPAQSMYRELASCSNVTDWQSYRLGIR---VTRKGMRREFVHTLNCTG 400
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AILE Q E G V IP LR ++ +
Sbjct: 401 LATTRTITAILENFQREDGVVEIPKVLRPYLEPI 434
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E I A L E LP+ ++G S CFR+E AG
Sbjct: 235 KIEGEDLYLIATAEHGIAAYLYKRELVEDELPLLFVGWSPCFRKEAGAG 283
>gi|227501878|ref|ZP_03931927.1| seryl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
gi|227077372|gb|EEI15335.1| seryl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
Length = 418
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 117/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + H+D + ++ P++Y G S+CFR+E GSHG+DTRGI RVHQF+K
Sbjct: 219 DDRYLVGTSEVALAGYHKDEIIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E FV P D E M +++ +E A + + YR ++I G L +AA+K D EAW
Sbjct: 279 LEMFVYCKPEDAED--MHQKLLDMEKEMLAAMELPYRTIDIAGGDLGSSAARKFDNEAWV 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P G +REL S SNC +Q+RRL RY K A ATTR I AILE HQ
Sbjct: 337 PTQGTYRELTSTSNCTTFQARRLSTRYRDESGKTQVAATLNGTLATTRWIVAILENHQQA 396
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 397 DGSVVVPEALRPFV 410
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D E +++ +E A + + YR ++I G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCKPEDAEDMHQ--KLLDMEKEMLAAMELPYRTIDIAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 324 SSAARKFDNEAWVPTQGTYRELTSTSNCTTFQARRLSTRY---RDESGKTQVAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V +P+ LR FV
Sbjct: 380 LATTRWIVAILENHQQADGSVVVPEALRPFV 410
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 455 VYVNEAGEIPFVKTAPIDEEETKK-------QKKQKEGMKKKVLI--DEAMIQNEKDLIA 505
V V E GEIP P D E + ++ K G + + D A +Q ++A
Sbjct: 118 VLVEEVGEIPHFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLMLA 177
Query: 506 TEKERNNALR----------EVIGKGEKVGDSAPEKDEL--DDKYLIATSEQPICAVHRD 553
+K R + E++ +G + E L DD+YL+ TSE + H+D
Sbjct: 178 AQKAREAGFQLMIPPVLVRPEIMSGTGFLGQHSDEIYYLPADDRYLVGTSEVALAGYHKD 237
Query: 554 SWLPEASLPIRYLGVSTCFRQEC 576
+ ++ P++Y G S+CFR+E
Sbjct: 238 EIIDLSNGPLQYAGWSSCFRREA 260
>gi|29830787|ref|NP_825421.1| seryl-tRNA synthetase [Streptomyces avermitilis MA-4680]
gi|46577430|sp|Q82FK8.1|SYS1_STRAW RecName: Full=Serine--tRNA ligase 1; AltName: Full=Seryl-tRNA
synthetase 1; Short=SerRS 1; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase 1
gi|29607900|dbj|BAC71956.1| putative seryl-tRNA synthetase [Streptomyces avermitilis MA-4680]
Length = 425
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDADKLPMRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P D E+ +++ +++ L + ++V+++ SG L +A +K D EA
Sbjct: 281 DKVEMFSYVAPEDAENEH--KRLLEWEKQWLTGLELPFQVIDVASGDLGASATRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDSFQARRLSVRMRDGKKVQPLATLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LPDGSVRVPEMLRPYL 414
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ L + ++V+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDAENEHK--RLLEWEKQWLTGLELPFQVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P G +REL S SNC ++Q+RRL VR K K++ + LN T
Sbjct: 328 ASATRKFDCEAWIPTQGKYRELTSASNCDSFQARRLSVRMRDGK----KVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQLPDGSVRVPEMLRPYL 414
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDADKLPMRYAGFSPCFRREA 264
>gi|379003433|ref|YP_005259105.1| seryl-tRNA synthetase [Pyrobaculum oguniense TE7]
gi|375158886|gb|AFA38498.1| seryl-tRNA synthetase [Pyrobaculum oguniense TE7]
Length = 449
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIAT+E I A L E LP Y+G S CFR+E G+ RD +GIFRVH F K
Sbjct: 239 EDLYLIATAEHGIAAYLYKRELVEEELPQLYVGWSPCFRKEAGAGNRDLKGIFRVHIFHK 298
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV + P +ESWK +E+ +N+EE LG+ YRVVNI + L AAKK D+E W+
Sbjct: 299 VEQFVFSLP--EESWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIEVWY 356
Query: 139 PGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIYATAC---ATTRVICAILETHQT 192
P G +REL SCSN D+QS RL + R G ++ ++ C ATTR I AILE Q
Sbjct: 357 PAQGMYRELASCSNVTDWQSYRLGIRVTRKGMKREFVHTLNCTGLATTRTITAILENFQR 416
Query: 193 ETG-VRIPDCLRKFVPAV 209
E G V IP LR ++ +
Sbjct: 417 EDGAVEIPKALRPYLEPI 434
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVH F KVEQFV + P +ESWK +E+ +N+EE LG+ YRVVNI + L
Sbjct: 286 DLKGIFRVHIFHKVEQFVFSLP--EESWKWHEEITKNTEELIRGLGLPYRVVNICAHDLG 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W+P G +REL SCSN +QS RL +R + K EFVH LN T
Sbjct: 344 APAAKKYDIEVWYPAQGMYRELASCSNVTDWQSYRLGIR---VTRKGMKREFVHTLNCTG 400
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AILE Q E G V IP LR ++ +
Sbjct: 401 LATTRTITAILENFQREDGAVEIPKALRPYLEPI 434
Score = 41.2 bits (95), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
+D YLIAT+E I A L E LP Y+G S CFR+E AG
Sbjct: 239 EDLYLIATAEHGIAAYLYKRELVEEELPQLYVGWSPCFRKEAGAG 283
>gi|433650764|ref|YP_007295766.1| seryl-tRNA synthetase [Mycobacterium smegmatis JS623]
gi|433300541|gb|AGB26361.1| seryl-tRNA synthetase [Mycobacterium smegmatis JS623]
Length = 419
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H + L + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHANEILDLSDGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E+ D ++ + A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCKPEDAEAEH--DRLLGWQRQMLAQIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VRY K A TTR + AILE HQ
Sbjct: 335 WVPTQGTYRELTSTSNCTTFQARRLSVRYRDENGKPQTAATLNGTLGTTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAG 215
G VRIP+ L +V A L G
Sbjct: 395 QPDGSVRIPEALVPYVGAEVLEPKG 419
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 93/160 (58%), Gaps = 7/160 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ D ++ + A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCKPEDAEAEH--DRLLGWQRQMLAQIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLSVRY---RDENGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAG 461
TTR + AILE HQ G VRIP+ L +V A + G
Sbjct: 380 LGTTRWLVAILENHQQPDGSVRIPEALVPYVGAEVLEPKG 419
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H + L + P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHANEILDLSDGPLRYAGWSSCFRREA 260
>gi|145591868|ref|YP_001153870.1| seryl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|145283636|gb|ABP51218.1| seryl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 463
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIAT+E I A L E LP Y+G S CFR+E G+ RD +GIFRVH F K
Sbjct: 253 EDLYLIATAEHGIAAYLYKRELVEEELPQLYVGWSPCFRKEAGAGNRDLKGIFRVHIFHK 312
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV + P +ESWK +E+ +N+EE LG+ YRVVNI + L AAKK D+E W+
Sbjct: 313 VEQFVFSLP--EESWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIEVWY 370
Query: 139 PGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIYATAC---ATTRVICAILETHQT 192
P G +REL SCSN D+QS RL + R G ++ ++ C ATTR I AILE Q
Sbjct: 371 PAQGMYRELASCSNVTDWQSYRLGIRVTRKGMKREFVHTLNCTGLATTRTITAILENFQR 430
Query: 193 ETG-VRIPDCLRKFVPAV 209
E G V IP LR ++ +
Sbjct: 431 EDGAVEIPKALRPYLEPI 448
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVH F KVEQFV + P +ESWK +E+ +N+EE LG+ YRVVNI + L
Sbjct: 300 DLKGIFRVHIFHKVEQFVFSLP--EESWKWHEEITKNTEELIRGLGLPYRVVNICAHDLG 357
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W+P G +REL SCSN +QS RL +R + K EFVH LN T
Sbjct: 358 APAAKKYDIEVWYPAQGMYRELASCSNVTDWQSYRLGIR---VTRKGMKREFVHTLNCTG 414
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AILE Q E G V IP LR ++ +
Sbjct: 415 LATTRTITAILENFQREDGAVEIPKALRPYLEPI 448
Score = 41.2 bits (95), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
+D YLIAT+E I A L E LP Y+G S CFR+E AG
Sbjct: 253 EDLYLIATAEHGIAAYLYKRELVEEELPQLYVGWSPCFRKEAGAG 297
>gi|297200865|ref|ZP_06918262.1| seryl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
gi|197716361|gb|EDY60395.1| seryl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
Length = 425
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P D E+ ++ +++ L + ++V+++ SG L +A++K D EA
Sbjct: 281 DKVEMFSYVAPEDAENEH--KRLLDWEKQWLTGLELPFQVIDVASGDLGSSASRKYDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRMRDGKKVQPLATLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LADGSVRVPEVLRPYL 414
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ ++ +++ L + ++V+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDAENEHK--RLLDWEKQWLTGLELPFQVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K K++ + LN T
Sbjct: 328 SSASRKYDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQLADGSVRVPEVLRPYL 414
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCFRREA 264
>gi|254384853|ref|ZP_05000190.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces sp. Mg1]
gi|194343735|gb|EDX24701.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces sp. Mg1]
Length = 425
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P + E+ +++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVAPEEAEAEHQ--RLLEWEKQWLTSLELPFQVIDVATGDLGSSASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL +RY K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSIRYRDGKKTAPLSTLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P LR ++
Sbjct: 399 QADGSVRVPAALRPYL 414
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P + E+ +++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEEAEAEHQ--RLLEWEKQWLTSLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL +RY KK + LN T
Sbjct: 328 SSASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSIRYRDGKKTAP----LSTLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P LR ++
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPAALRPYL 414
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREA 264
>gi|456387036|gb|EMF52549.1| serS protein [Streptomyces bottropensis ATCC 25435]
Length = 425
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + A H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVALAAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D ++ ++ +++ L + +RV+++ S L +A++K D EAW
Sbjct: 283 VEMFSYVAPEDSQAEHQ--RLLDWEKQWLTSLELPFRVIDVASADLGSSASRKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R KQ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLQIRVRDGKQVKPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D ++ ++ +++ L + +RV+++ S L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ--RLLDWEKQWLTSLELPFRVIDVASADLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S S+C +QSRRL +R K +++ + LN T
Sbjct: 328 SSASRKFDCEAWIPTQGKYRELTSTSDCTEFQSRRLQIRVRDGK----QVKPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I AILE HQ G VR+P+ LR ++ V E
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVLE 421
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + A H D + LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVALAAYHMDEIIDADRLPLRYAGFSPCFRREA 264
>gi|290959073|ref|YP_003490255.1| serine-tRNA ligase [Streptomyces scabiei 87.22]
gi|260648599|emb|CBG71710.1| serine-tRNA ligase [Streptomyces scabiei 87.22]
Length = 425
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + A H D + LP+RY G S CFR+E GSHG+DTRGIFRVHQF+K
Sbjct: 223 DDLYLVGTSEVALAAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P D ++ ++ +++ L + +RV+++ S L +A++K D EAW
Sbjct: 283 VEMFSYVAPEDSQAEHQ--RLLDWEKQWLTSLELPFRVIDVASADLGSSASRKFDCEAWI 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQTE 193
P G +REL S S+C ++QSRRL +R KQ + T CA R I AILE HQ
Sbjct: 341 PTQGKYRELTSTSDCTEFQSRRLQIRVRDGKQVKPLATLNGTLCAVPRTIVAILENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEVLRPYL 414
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D ++ ++ +++ L + +RV+++ S L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ--RLLDWEKQWLTSLELPFRVIDVASADLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S S+C +QSRRL +R K +++ + LN T
Sbjct: 328 SSASRKFDCEAWIPTQGKYRELTSTSDCTEFQSRRLQIRVRDGK----QVKPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
CA R I AILE HQ G VR+P+ LR ++ V E
Sbjct: 384 CAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVLE 421
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + A H D + LP+RY G S CFR+E
Sbjct: 223 DDLYLVGTSEVALAAYHMDEIIDADRLPLRYAGFSPCFRREA 264
>gi|289572486|ref|ZP_06452713.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis K85]
gi|289536917|gb|EFD41495.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis K85]
Length = 419
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D YL+ TSE P+ H L + P+RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGCSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E + ++ + A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P GA+REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WIPTQGAYRELTSTSNCTTFQARRLATRYRDASGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+PD L FV
Sbjct: 395 RPDGSVRVPDALVPFV 410
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E + ++ + A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P GA+REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+PD L FV
Sbjct: 380 LATTRWLVAILENHQRPDGSVRVPDALVPFV 410
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D YL+ TSE P+ H L + P+RY G S+CFR+E
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGCSSCFRREA 260
>gi|354614974|ref|ZP_09032793.1| Seryl-tRNA synthetase [Saccharomonospora paurometabolica YIM 90007]
gi|353220680|gb|EHB85099.1| Seryl-tRNA synthetase [Saccharomonospora paurometabolica YIM 90007]
Length = 420
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 117/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L + P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEILDLSGGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV + P D E+ ++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 280 VEMFVFSRPEDAEAEHA--NLLSWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL VR+ + A ATTR I AILE HQ
Sbjct: 338 PTQRAYRELTSTSNCTTFQARRLAVRHRDADGRTQTAATLNGTLATTRWIVAILENHQQP 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR F+
Sbjct: 398 DGSVRVPEALRPFL 411
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV + P D E+ ++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVFSRPEDAEAEHA--NLLSWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VR+ + + + + LN T
Sbjct: 325 TSAARKYDCEAWVPTQRAYRELTSTSNCTTFQARRLAVRH---RDADGRTQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P+ LR F+
Sbjct: 381 LATTRWIVAILENHQQPDGSVRVPEALRPFL 411
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L + P RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEILDLSGGPRRYAGWSSCFRREA 261
>gi|254822673|ref|ZP_05227674.1| seryl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|379744924|ref|YP_005335745.1| seryl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|379752213|ref|YP_005340885.1| seryl-tRNA synthetase [Mycobacterium intracellulare MOTT-02]
gi|379759635|ref|YP_005346032.1| seryl-tRNA synthetase [Mycobacterium intracellulare MOTT-64]
gi|387873606|ref|YP_006303910.1| seryl-tRNA synthetase [Mycobacterium sp. MOTT36Y]
gi|406028545|ref|YP_006727435.1| seryl-tRNA synthetase [Mycobacterium indicus pranii MTCC 9506]
gi|443308526|ref|ZP_21038312.1| seryl-tRNA synthetase [Mycobacterium sp. H4Y]
gi|378797288|gb|AFC41424.1| seryl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|378802429|gb|AFC46564.1| seryl-tRNA synthetase [Mycobacterium intracellulare MOTT-02]
gi|378807577|gb|AFC51711.1| seryl-tRNA synthetase [Mycobacterium intracellulare MOTT-64]
gi|386787064|gb|AFJ33183.1| seryl-tRNA synthetase [Mycobacterium sp. MOTT36Y]
gi|405127092|gb|AFS12347.1| Seryl-tRNA synthetase [Mycobacterium indicus pranii MTCC 9506]
gi|442763642|gb|ELR81641.1| seryl-tRNA synthetase [Mycobacterium sp. H4Y]
Length = 419
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 119/205 (58%), Gaps = 8/205 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
+ DD YL+ TSE P+ H + L + P+RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 DADDLYLVGTSEVPLAGYHANEILDLSGGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E+ ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEAEHQ--RLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K A TTR + AILE HQ
Sbjct: 335 WVPTQGTYRELTSTSNCTTFQARRLSTRYRDENGKPQTAATLNGTLGTTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAG 215
G VR+P+ L FV A L G
Sbjct: 395 RPDGSVRVPEALVPFVGAEVLEPGG 419
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 92/160 (57%), Gaps = 7/160 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E+ ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCTPADAEAEH--QRLLGWQREMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLSTRY---RDENGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAG 461
TTR + AILE HQ G VR+P+ L FV A + G
Sbjct: 380 LGTTRWLVAILENHQRPDGSVRVPEALVPFVGAEVLEPGG 419
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+ DD YL+ TSE P+ H + L + P+RY G S+CFR+E
Sbjct: 217 DADDLYLVGTSEVPLAGYHANEILDLSGGPLRYAGWSSCFRREA 260
>gi|148271694|ref|YP_001221255.1| seryl-tRNA synthetase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166219864|sp|A5CNA2.1|SYS_CLAM3 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|147829624|emb|CAN00539.1| serS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 426
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 117/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL TSE + H D L A PIRY G STC+R+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLTGTSEVALAGYHADEILDLAQGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E F P D E+ + ++ E DLG++YRV++ +G L +AA+K D+EAW
Sbjct: 280 LEMFSYVDPADAEAEH--ERLLAMQERMMQDLGLSYRVIDTAAGDLGSSAARKYDVEAWI 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL R+ + A ATTR I AILETHQ
Sbjct: 338 PTQDAYRELTSTSNCTTFQARRLGTRFRGEDGRTSPVATLNGTLATTRWIVAILETHQQA 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 398 DGSVRVPEALRPYL 411
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E F P D E+ + ++ E DLG++YRV++ +G L
Sbjct: 267 DTRGIIRVHQFQKLEMFSYVDPADAEAEH--ERLLAMQERMMQDLGLSYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D+EAW P A+REL S SNC +Q+RRL R+ + + + V LN T
Sbjct: 325 SSAARKYDVEAWIPTQDAYRELTSTSNCTTFQARRLGTRF---RGEDGRTSPVATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
ATTR I AILETHQ G VR+P+ LR ++ + V E
Sbjct: 381 LATTRWIVAILETHQQADGSVRVPEALRPYLGGLEVLE 418
Score = 44.7 bits (104), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL TSE + H D L A PIRY G STC+R+E
Sbjct: 220 DDLYLTGTSEVALAGYHADEILDLAQGPIRYAGWSTCYRKEA 261
>gi|15610970|ref|NP_218351.1| SERYL-tRNA synthetase SerS (serine--tRNA ligase) (SERRS) (serine
translase) [Mycobacterium tuberculosis H37Rv]
gi|15843458|ref|NP_338495.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
gi|31795008|ref|NP_857501.1| seryl-tRNA synthetase [Mycobacterium bovis AF2122/97]
gi|121639752|ref|YP_979976.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663702|ref|YP_001285225.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148825041|ref|YP_001289795.1| seryl-tRNA synthetase [Mycobacterium tuberculosis F11]
gi|167969949|ref|ZP_02552226.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|224992247|ref|YP_002646937.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800882|ref|YP_003033884.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN 1435]
gi|254552950|ref|ZP_05143397.1| seryl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289441272|ref|ZP_06431016.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|289445435|ref|ZP_06435179.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CPHL_A]
gi|289572087|ref|ZP_06452314.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T17]
gi|289747675|ref|ZP_06507053.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 02_1987]
gi|289748365|ref|ZP_06507743.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T92]
gi|289755967|ref|ZP_06515345.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis EAS054]
gi|289764020|ref|ZP_06523398.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis GM 1503]
gi|294993037|ref|ZP_06798728.1| seryl-tRNA synthetase [Mycobacterium tuberculosis 210]
gi|297636517|ref|ZP_06954297.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
gi|297733512|ref|ZP_06962630.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
gi|298527309|ref|ZP_07014718.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 94_M4241A]
gi|306778197|ref|ZP_07416534.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu001]
gi|306778727|ref|ZP_07417064.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu002]
gi|306786754|ref|ZP_07425076.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu003]
gi|306786884|ref|ZP_07425206.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu004]
gi|306791439|ref|ZP_07429741.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu005]
gi|306795504|ref|ZP_07433806.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu006]
gi|306801479|ref|ZP_07438147.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu008]
gi|306805686|ref|ZP_07442354.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu007]
gi|306970081|ref|ZP_07482742.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu009]
gi|307082021|ref|ZP_07491191.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu011]
gi|307086634|ref|ZP_07495747.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu012]
gi|313660843|ref|ZP_07817723.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
gi|339633829|ref|YP_004725471.1| seryl-tRNA synthetase [Mycobacterium africanum GM041182]
gi|340628803|ref|YP_004747255.1| seryl-tRNA synthetase SERS [Mycobacterium canettii CIPT 140010059]
gi|375298104|ref|YP_005102372.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 4207]
gi|378773614|ref|YP_005173347.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Mexico]
gi|383309548|ref|YP_005362359.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB327]
gi|385993045|ref|YP_005911344.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5180]
gi|385996687|ref|YP_005914986.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5079]
gi|386000626|ref|YP_005918926.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CTRI-2]
gi|386006629|ref|YP_005924908.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB423]
gi|392388428|ref|YP_005310057.1| serS [Mycobacterium tuberculosis UT205]
gi|392434318|ref|YP_006475363.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 605]
gi|397675795|ref|YP_006517331.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
gi|422815089|ref|ZP_16863307.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CDC1551A]
gi|424806395|ref|ZP_18231826.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis W-148]
gi|424945709|ref|ZP_18361405.1| seryl-tRNA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|433628977|ref|YP_007262606.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140060008]
gi|449065953|ref|YP_007433036.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Korea 1168P]
gi|54039689|sp|P67562.1|SYS_MYCBO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|54042040|sp|P67561.1|SYS_MYCTU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166222746|sp|A1KQG9.1|SYS_MYCBP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166222750|sp|A5U9G3.1|SYS_MYCTA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|254783038|sp|C1AIU0.1|SYS_MYCBT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|13883829|gb|AAK48309.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
gi|31620606|emb|CAD96050.1| SERYL-TRNA SYNTHETASE SERS (SERINE--TRNA LIGASE) (SERRS) (SERINE
TRANSLASE) [Mycobacterium bovis AF2122/97]
gi|121495400|emb|CAL73887.1| seryl-tRNA synthetase serS [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148507854|gb|ABQ75663.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148723568|gb|ABR08193.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis F11]
gi|224775363|dbj|BAH28169.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322386|gb|ACT26989.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 1435]
gi|289414191|gb|EFD11431.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|289418393|gb|EFD15594.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CPHL_A]
gi|289545841|gb|EFD49489.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T17]
gi|289688203|gb|EFD55691.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 02_1987]
gi|289688952|gb|EFD56381.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T92]
gi|289696554|gb|EFD63983.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis EAS054]
gi|289711526|gb|EFD75542.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis GM 1503]
gi|298497103|gb|EFI32397.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 94_M4241A]
gi|308213530|gb|EFO72929.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu001]
gi|308328286|gb|EFP17137.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu002]
gi|308328688|gb|EFP17539.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu003]
gi|308336434|gb|EFP25285.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu004]
gi|308340028|gb|EFP28879.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu005]
gi|308344026|gb|EFP32877.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu006]
gi|308347812|gb|EFP36663.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu007]
gi|308351748|gb|EFP40599.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu008]
gi|308352437|gb|EFP41288.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu009]
gi|308360344|gb|EFP49195.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu011]
gi|308363977|gb|EFP52828.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu012]
gi|323717501|gb|EGB26704.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CDC1551A]
gi|326905671|gb|EGE52604.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis W-148]
gi|328460610|gb|AEB06033.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 4207]
gi|339296642|gb|AEJ48753.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5079]
gi|339300239|gb|AEJ52349.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5180]
gi|339333185|emb|CCC28918.1| SERYL-tRNA synthetase SERS (serine--tRNA ligase) [Mycobacterium
africanum GM041182]
gi|340006993|emb|CCC46184.1| seryl-tRNA synthetase SERS (serine--tRNA ligase) (SERRS) (serine
translase) [Mycobacterium canettii CIPT 140010059]
gi|341603773|emb|CCC66454.1| seryl-tRNA synthetase serS [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|344221674|gb|AEN02305.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CTRI-2]
gi|356595935|gb|AET21164.1| Seryl-tRNA synthetase [Mycobacterium bovis BCG str. Mexico]
gi|358230224|dbj|GAA43716.1| seryl-tRNA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|378546979|emb|CCE39258.1| serS [Mycobacterium tuberculosis UT205]
gi|379030232|dbj|BAL67965.1| seryl-tRNA synthetase [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|380723501|gb|AFE18610.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB327]
gi|380727117|gb|AFE14912.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB423]
gi|392055728|gb|AFM51286.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 605]
gi|395140701|gb|AFN51860.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
gi|432156583|emb|CCK53845.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140060008]
gi|440583348|emb|CCG13751.1| SERYL-TRNA SYNTHETASE SERS (SERINE-TRNA LIGASE) (SERRS) (SERINE
TRANSLASE) [Mycobacterium tuberculosis 7199-99]
gi|444897397|emb|CCP46663.1| SERYL-tRNA synthetase SerS (serine--tRNA ligase) (SERRS) (serine
translase) [Mycobacterium tuberculosis H37Rv]
gi|449034461|gb|AGE69888.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 419
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D YL+ TSE P+ H L + P+RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E + ++ + A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P GA+REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WIPTQGAYRELTSTSNCTTFQARRLATRYRDASGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+PD L FV
Sbjct: 395 RPDGSVRVPDALVPFV 410
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E + ++ + A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P GA+REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+PD L FV
Sbjct: 380 LATTRWLVAILENHQRPDGSVRVPDALVPFV 410
Score = 42.0 bits (97), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D YL+ TSE P+ H L + P+RY G S+CFR+E
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREA 260
>gi|86609248|ref|YP_478010.1| seryl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123501982|sp|Q2JKN4.1|SYS_SYNJB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|86557790|gb|ABD02747.1| seryl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 435
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 127/205 (61%), Gaps = 10/205 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +LI T+E P+ ++RD +P SLP+ + + CFR+E GS+GRDT+G+ R+HQF+K
Sbjct: 227 DDLWLIPTAEVPLTNLYRDEMIPAESLPLYFCAYTPCFRREAGSYGRDTKGLIRLHQFQK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P D+S ++++Q++E L + YRVV + SG L AAA+ DLE WF
Sbjct: 287 VELVKVTRP--DQSEAEHEKLVQDAEAILQMLELPYRVVELCSGDLGFAAARCFDLEVWF 344
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQ 191
P +RE+ SCSNC D+Q+RR +RY + QK + + A R + A+LE HQ
Sbjct: 345 PSQNQYREISSCSNCWDFQARRANLRYKEAGQKGTQFVHTLNGSGLAVGRSLAALLENHQ 404
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAG 215
G +RIP LR F+ + +L+E G
Sbjct: 405 QPDGSIRIPKALRPFLSSRFLSEDG 429
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G+ R+HQF+KVE +T P D+S ++++Q++E L + YRVV + SG L
Sbjct: 274 DTKGLIRLHQFQKVELVKVTRP--DQSEAEHEKLVQDAEAILQMLELPYRVVELCSGDLG 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA+ DLE WFP +RE+ SCSNC +Q+RR +RY + + + +FVH LN +
Sbjct: 332 FAAARCFDLEVWFPSQNQYREISSCSNCWDFQARRANLRYKEAGQ--KGTQFVHTLNGSG 389
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAG 461
A R + A+LE HQ G +RIP LR F+ + +++E G
Sbjct: 390 LAVGRSLAALLENHQQPDGSIRIPKALRPFLSSRFLSEDG 429
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD +LI T+E P+ ++RD +P SLP+ + + CFR+E
Sbjct: 227 DDLWLIPTAEVPLTNLYRDEMIPAESLPLYFCAYTPCFRREA 268
>gi|441522133|ref|ZP_21003787.1| seryl-tRNA synthetase [Gordonia sihwensis NBRC 108236]
gi|441458353|dbj|GAC61748.1| seryl-tRNA synthetase [Gordonia sihwensis NBRC 108236]
Length = 417
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H+D L + P RY G STCFR+E GS+G+DTRGI RVHQF+K
Sbjct: 218 DDLYLVGTSEVPLAGYHKDEILDLSGGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDK 277
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ P D E+ ++ ++ A + + YRV+++ G L +AA+K D EAW
Sbjct: 278 VEGFIYCKPEDAEAEHQ--RILGWEKDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWV 335
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P G +REL S SNC +Q+RRL VRY K +I AT ATTR + AILE HQ
Sbjct: 336 PTQGTYRELTSTSNCTTFQARRLSVRYRDENGKPQIAATLNGTLATTRWLVAILENHQQP 395
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ L +FV
Sbjct: 396 DGSVRLPEELARFV 409
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ ++ ++ A + + YRV+++ G L
Sbjct: 265 DTRGIIRVHQFDKVEGFIYCKPEDAEAEHQ--RILGWEKDMLAAIDVPYRVIDVAGGDLG 322
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 323 SSAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLSVRY---RDENGKPQIAATLNGT- 378
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
ATTR + AILE HQ G VR+P+ L +FV ++
Sbjct: 379 LATTRWLVAILENHQQPDGSVRLPEELARFVGVEHI 414
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H+D L + P RY G STCFR+E
Sbjct: 218 DDLYLVGTSEVPLAGYHKDEILDLSGGPKRYAGWSTCFRREA 259
>gi|381163962|ref|ZP_09873192.1| seryl-tRNA synthetase [Saccharomonospora azurea NA-128]
gi|379255867|gb|EHY89793.1| seryl-tRNA synthetase [Saccharomonospora azurea NA-128]
Length = 421
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 126/201 (62%), Gaps = 8/201 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D + ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEIVDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV +P DE+ +++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 280 VEMFVFCTP--DEAEAEHAKLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL VRY + +I AT ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTFQARRLSVRYRDEDGRPQIAATLNGTLATTRWIVAILENHQQP 397
Query: 194 TG-VRIPDCLRKFVPAVYLNE 213
G VR+P+ +R F+ + + E
Sbjct: 398 DGSVRVPEAMRPFLGGLSVLE 418
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P DE+ +++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVFCTP--DEAEAEHAKLLAWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + + + + LN T
Sbjct: 325 TSAARKYDCEAWVPTQQAYRELTSTSNCTTFQARRLSVRY---RDEDGRPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
ATTR I AILE HQ G VR+P+ +R F+ + V E
Sbjct: 381 LATTRWIVAILENHQQPDGSVRVPEAMRPFLGGLSVLE 418
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D + ++ P+RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEIVDLSAGPLRYAGWSSCFRREA 261
>gi|254366378|ref|ZP_04982422.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis str.
Haarlem]
gi|134151890|gb|EBA43935.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis str.
Haarlem]
Length = 419
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D YL+ TSE P+ H L + P+RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E + ++ + A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P GA+REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WIPTQGAYRELTSTSNCTTFQARRLATRYRDASGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+PD L FV
Sbjct: 395 RPDGSVRVPDALVPFV 410
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E + ++ + A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P GA+REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+PD L FV
Sbjct: 380 LATTRWLVAILENHQRPDGSVRVPDALVPFV 410
Score = 42.0 bits (97), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E D YL+ TSE P+ H L + P+RY G S+CFR+E +
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGS 262
>gi|433644025|ref|YP_007289784.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070008]
gi|432160573|emb|CCK57900.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070008]
Length = 419
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D YL+ TSE P+ H L + P+RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E + ++ + A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P GA+REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WIPTQGAYRELTSTSNCTTFQARRLATRYRDASGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+PD L FV
Sbjct: 395 RPDGSVRVPDALVPFV 410
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E + ++ + A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P GA+REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+PD L FV
Sbjct: 380 LATTRWLVAILENHQRPDGSVRVPDALVPFV 410
Score = 42.0 bits (97), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D YL+ TSE P+ H L + P+RY G S+CFR+E
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREA 260
>gi|418462893|ref|ZP_13033928.1| seryl-tRNA synthetase [Saccharomonospora azurea SZMC 14600]
gi|359735235|gb|EHK84197.1| seryl-tRNA synthetase [Saccharomonospora azurea SZMC 14600]
Length = 421
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 126/201 (62%), Gaps = 8/201 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D + ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEIVDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV +P DE+ +++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 280 VEMFVFCTP--DEAEAEHAKLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL VRY + +I AT ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTFQARRLSVRYRDEDGRPQIAATLNGTLATTRWIVAILENHQQP 397
Query: 194 TG-VRIPDCLRKFVPAVYLNE 213
G VR+P+ +R F+ + + E
Sbjct: 398 DGSVRVPEAMRPFLGGLSVLE 418
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P DE+ +++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVFCTP--DEAEAEHAKLLAWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + + + + LN T
Sbjct: 325 TSAARKYDCEAWVPTQQAYRELTSTSNCTTFQARRLSVRY---RDEDGRPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
ATTR I AILE HQ G VR+P+ +R F+ + V E
Sbjct: 381 LATTRWIVAILENHQQPDGSVRVPEAMRPFLGGLSVLE 418
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D + ++ P+RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEIVDLSAGPLRYAGWSSCFRREA 261
>gi|297193371|ref|ZP_06910769.1| seryl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC 25486]
gi|197718310|gb|EDY62218.1| seryl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC 25486]
Length = 425
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P D E+ ++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVAPEDAEAEH--KRLLDWEKQWLTALELPFQVIDVATGDLGSSASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR + K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRMREGKKVQPLATLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LADGSVRVPEVLRPYL 414
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ ++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDAEAEHK--RLLDWEKQWLTALELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR + K K++ + LN T
Sbjct: 328 SSASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMREGK----KVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQLADGSVRVPEVLRPYL 414
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREA 264
>gi|406905620|gb|EKD47034.1| hypothetical protein ACD_66C00250G0003 [uncultured bacterium]
Length = 423
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 118/195 (60%), Gaps = 9/195 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ YLI T+EQ + A+H D L LPIRY+G S C+R+E GS+G+DTRGI RVHQF+K
Sbjct: 221 DNLYLIGTAEQSVGAMHMDEILDGTKLPIRYVGFSPCYRREAGSYGKDTRGILRVHQFDK 280
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E F ++P D ++ L +++ E L I Y++V +V+G L AA+K D+EAW
Sbjct: 281 IEMFTFSTPEDSDAEHSL--ILEIEERLMQSLKIPYQLVKMVTGDLGLPAARKYDIEAWM 338
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQT 192
P A+RE SCS+C D+Q+RRL RY K + T A R I ILE Q
Sbjct: 339 PAQDAYRETHSCSSCTDFQARRLNTRYKDDSGKTHFVHTLNGTGFAIGRTIITILENFQQ 398
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR F+
Sbjct: 399 EDGSVIIPEVLRPFM 413
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E F ++P D ++ +L +++ E L I Y++V +V+G L
Sbjct: 268 DTRGILRVHQFDKIEMFTFSTPEDSDAEHSL--ILEIEERLMQSLKIPYQLVKMVTGDLG 325
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+K D+EAW P A+RE SCS+C +Q+RRL RY K + K FVH LN T
Sbjct: 326 LPAARKYDIEAWMPAQDAYRETHSCSSCTDFQARRLNTRY---KDDSGKTHFVHTLNGTG 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R I ILE Q E G V IP+ LR F+
Sbjct: 383 FAIGRTIITILENFQQEDGSVIIPEVLRPFM 413
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ YLI T+EQ + A+H D L LPIRY+G S C+R+E
Sbjct: 221 DNLYLIGTAEQSVGAMHMDEILDGTKLPIRYVGFSPCYRREA 262
>gi|327311812|ref|YP_004338709.1| seryl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
gi|326948291|gb|AEA13397.1| seryl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
Length = 453
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 123/202 (60%), Gaps = 9/202 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A L E LP Y+G S CFR+E G+ RD +GIFRVH
Sbjct: 239 KLENEDLYLIATAEHGIAAYLYGRDLLEEELPQLYVGWSPCFRREAGAGSRDIKGIFRVH 298
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
F KVEQFV + +ESW +E+ +N+EE LG+ YRVVNI + L AAKK D+
Sbjct: 299 IFHKVEQFVFSLA--EESWTWHEEITKNTEELMQGLGLPYRVVNICAHDLGAPAAKKYDV 356
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIYATAC---ATTRVICAILE 188
E W+P G +REL SCSN D+QS RL + R G ++ ++ C ATTR I AILE
Sbjct: 357 EVWYPAQGTYRELASCSNVTDWQSYRLGIRVTRRGMKREYVHTLNCTGLATTRTITAILE 416
Query: 189 THQTETG-VRIPDCLRKFVPAV 209
+Q E G V IP LRK++ +
Sbjct: 417 NYQREDGAVEIPKVLRKYLEPI 438
Score = 142 bits (359), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVH F KVEQFV + +ESW +E+ +N+EE LG+ YRVVNI + L
Sbjct: 290 DIKGIFRVHIFHKVEQFVFSLA--EESWTWHEEITKNTEELMQGLGLPYRVVNICAHDLG 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W+P G +REL SCSN +QS RL +R + K E+VH LN T
Sbjct: 348 APAAKKYDVEVWYPAQGTYRELASCSNVTDWQSYRLGIR---VTRRGMKREYVHTLNCTG 404
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AILE +Q E G V IP LRK++ +
Sbjct: 405 LATTRTITAILENYQREDGAVEIPKVLRKYLEPI 438
Score = 40.8 bits (94), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E I A L E LP Y+G S CFR+E AG
Sbjct: 239 KLENEDLYLIATAEHGIAAYLYGRDLLEEELPQLYVGWSPCFRREAGAG 287
>gi|384500248|gb|EIE90739.1| seryl-tRNA synthetase [Rhizopus delemar RA 99-880]
Length = 422
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 115/161 (71%), Gaps = 7/161 (4%)
Query: 306 GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 365
GIFRVHQFEK+EQFVLT+P ++SW+ +EMI++SEEF+ LG++YRVV IVSGALN+AA
Sbjct: 259 GIFRVHQFEKIEQFVLTAP--EKSWEMFNEMIEHSEEFFQSLGLSYRVVAIVSGALNNAA 316
Query: 366 AKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACAT 425
AKK DLEAWFP G ++ELVSCSN YQSR L +R K + + + V LN+T CAT
Sbjct: 317 AKKYDLEAWFPYQGEYKELVSCSNRTDYQSRNLEIRCSVKKMSDREKKHVRCLNSTLCAT 376
Query: 426 TRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFV 466
R CA+LE+ Q E G+ IP L VP Y++ IP++
Sbjct: 377 ERATCALLESWQREDGLEIPPPL---VP--YMDGQTFIPYI 412
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 112/161 (69%), Gaps = 16/161 (9%)
Query: 69 GIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 128
GIFRVHQFEK+EQFVLT+P ++SW+M +EMI++SEEF+ LG++YRVV IVSGALN+AA
Sbjct: 259 GIFRVHQFEKIEQFVLTAP--EKSWEMFNEMIEHSEEFFQSLGLSYRVVAIVSGALNNAA 316
Query: 129 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACAT 179
AKK DLEAWFP G ++ELVSCSN DYQSR L +R K + +T CAT
Sbjct: 317 AKKYDLEAWFPYQGEYKELVSCSNRTDYQSRNLEIRCSVKKMSDREKKHVRCLNSTLCAT 376
Query: 180 TRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFV 220
R CA+LE+ Q E G+ IP L VP Y++ IP++
Sbjct: 377 ERATCALLESWQREDGLEIPPPL---VP--YMDGQTFIPYI 412
>gi|296268069|ref|YP_003650701.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833]
gi|296090856|gb|ADG86808.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833]
Length = 421
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + A H D L A+LP+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 218 EADDLYLVGTSEVSLAAYHADEILDAAALPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D + ++ ++ + + YRVV+I +G L +AA+K D EA
Sbjct: 278 DKVEMFSFCRPEDAHEEHL--RLLGWQKQMLDKIEVPYRVVDIATGDLGTSAARKYDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQ-KIYATACATTRVICAILETHQ 191
W P G +REL S SNC D+Q+RRL VRY G T+ ATTR I AILE HQ
Sbjct: 336 WLPSQGRYRELTSTSNCTDFQARRLRVRYRDEDGTTRHVATLNGTLATTRWIVAILENHQ 395
Query: 192 TETG-VRIPDCLRKFV 206
G V +P LR +V
Sbjct: 396 QRDGSVVVPKALRPYV 411
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ ++ + + YRVV+I +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFSFCRPEDAHEEHL--RLLGWQKQMLDKIEVPYRVVDIATGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL VRY + + V LN T
Sbjct: 325 TSAARKYDCEAWLPSQGRYRELTSTSNCTDFQARRLRVRY---RDEDGTTRHVATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V +P LR +V
Sbjct: 381 LATTRWIVAILENHQQRDGSVVVPKALRPYV 411
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + A H D L A+LP+RY G S+CFR+E
Sbjct: 218 EADDLYLVGTSEVSLAAYHADEILDAAALPLRYAGWSSCFRREA 261
>gi|398784224|ref|ZP_10547502.1| seryl-tRNA ligase [Streptomyces auratus AGR0001]
gi|396995398|gb|EJJ06414.1| seryl-tRNA ligase [Streptomyces auratus AGR0001]
Length = 429
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 123/200 (61%), Gaps = 12/200 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + A LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIVDAAKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P D ++ ++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVTPEDAQAEHQ--RLLDWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT---KQKIY------ATACATTRVICAIL 187
W P G +REL S SNC ++Q+RRL VR + KQK+ T CA R I AI
Sbjct: 339 WIPTQGKYRELTSASNCDEFQARRLSVRMRENVDGKQKVSPLATLNGTLCAVPRTIVAIF 398
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E HQ G VR+P+ LR ++
Sbjct: 399 ENHQQADGSVRVPEVLRPYL 418
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D ++ ++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVTPEDAQAEHQ--RLLDWEKQWLTGLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR + +K+ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSASNCDEFQARRLSVRMRENVDGKQKVSPLATLNGTL 387
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AI E HQ G VR+P+ LR ++
Sbjct: 388 CAVPRTIVAIFENHQQADGSVRVPEVLRPYL 418
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + A LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIVDAAKLPLRYAGFSPCFRREA 264
>gi|357019669|ref|ZP_09081917.1| seryl-tRNA synthetase [Mycobacterium thermoresistibile ATCC 19527]
gi|356480574|gb|EHI13694.1| seryl-tRNA synthetase [Mycobacterium thermoresistibile ATCC 19527]
Length = 417
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 123/196 (62%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ESDDLYLVGTSEVPLAGYHADEILDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P + E+ D ++ ++ A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEAFVYCRPEEAEAEH--DRLLAWQKKMLAHIEVPYRVIDVAAGDLGASAARKYDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P A+REL S SNC +Q+RRL RY + +I AT ATTR + AILE HQ
Sbjct: 335 WLPSQQAYRELTSTSNCTTFQARRLATRYRDENGRPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR +V
Sbjct: 395 RPDGSVRVPEALRPYV 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P + E+ D ++ ++ A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEAFVYCRPEEAEAEH--DRLLAWQKKMLAHIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL RY + N + + LN T
Sbjct: 324 ASAARKYDCEAWLPSQQAYRELTSTSNCTTFQARRLATRY---RDENGRPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P+ LR +V
Sbjct: 380 LATTRWLVAILENHQRPDGSVRVPEALRPYV 410
Score = 47.4 bits (111), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L ++ P+RY G S+CFR+E
Sbjct: 217 ESDDLYLVGTSEVPLAGYHADEILDLSNGPLRYAGWSSCFRREA 260
>gi|365864768|ref|ZP_09404447.1| seryl-tRNA synthetase [Streptomyces sp. W007]
gi|364005808|gb|EHM26869.1| seryl-tRNA synthetase [Streptomyces sp. W007]
Length = 425
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDAGKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D E+ ++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVDPADAEAEHR--RLLDWEKQWLTALELPFQVIDVATGDLGASASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR + K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRMREGKKVQPLATLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LPDGSVRVPEVLRPYL 414
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D E+ ++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVDPADAEAEHR--RLLDWEKQWLTALELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR + K K++ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMREGK----KVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQLPDGSVRVPEVLRPYL 414
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDAGKLPLRYAGFSPCFRREA 264
>gi|357400606|ref|YP_004912531.1| Seryl-tRNA synthetase 1 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386356659|ref|YP_006054905.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|337767015|emb|CCB75726.1| Seryl-tRNA synthetase 1 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365807167|gb|AEW95383.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 412
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + A LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 208 EKDDYYLVGTSEVPLAAYHMDEIVEAARLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 267
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P + E+ ++ +++ LG+ ++V+++ +G L +A++K D EA
Sbjct: 268 DKVEMFCFVAPEEAEAEH--QRLLAWEKQWLGALGLPFQVIDVATGDLGASASRKFDCEA 325
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILETHQ 191
W P G +REL S SNC ++Q+RRL VR + + T CA R I AILE HQ
Sbjct: 326 WIPTQGKYRELTSASNCDEFQARRLSVRMRDERGTRPLATLNGTLCAVPRTIVAILENHQ 385
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR ++
Sbjct: 386 QADGSVVVPEVLRPYL 401
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P + E+ ++ +++ LG+ ++V+++ +G L
Sbjct: 257 DTRGIFRVHQFDKVEMFCFVAPEEAEAEH--QRLLAWEKQWLGALGLPFQVIDVATGDLG 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR + + LN T
Sbjct: 315 ASASRKFDCEAWIPTQGKYRELTSASNCDEFQARRLSVRMRDERGTRP----LATLNGTL 370
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G V +P+ LR ++
Sbjct: 371 CAVPRTIVAILENHQQADGSVVVPEVLRPYL 401
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + A LP+RY G S CFR+E
Sbjct: 208 EKDDYYLVGTSEVPLAAYHMDEIVEAARLPLRYAGFSPCFRREA 251
>gi|357412315|ref|YP_004924051.1| seryl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
gi|320009684|gb|ADW04534.1| seryl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 425
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGYSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVE F P D E+ ++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 EKVEMFSYVDPTDAEAEHR--RLLDWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRMRDGKKVQPLATLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LPDGSVRVPEALRPYL 414
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEKVE F P D E+ ++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFEKVEMFSYVDPTDAEAEHR--RLLDWEKQWLTGLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K K++ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQLPDGSVRVPEALRPYL 414
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGYSPCFRREA 264
>gi|54022104|ref|YP_116346.1| seryl-tRNA synthetase [Nocardia farcinica IFM 10152]
gi|67461690|sp|Q5Z3K9.1|SYS_NOCFA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|54013612|dbj|BAD54982.1| putative seryl-tRNA synthase [Nocardia farcinica IFM 10152]
Length = 420
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L ++ P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDMYLVGTSEVPLAGYHADEILDLSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV T+P D++ + ++ E A + + YR++++ +G L +AA+K D EAW
Sbjct: 280 VEMFVYTTP--DQAEAEHERLLAWEREMLAAIEVPYRIIDVAAGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL VRY K +I AT ATTR I AILE HQ
Sbjct: 338 PSQQTYRELTSTSNCTTFQARRLSVRYRDENGKPQIAATLNGTLATTRWIVAILENHQRA 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 398 DGSVRVPAALVPFV 411
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV T+P D++ + ++ E A + + YR++++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVYTTP--DQAEAEHERLLAWEREMLAAIEVPYRIIDVAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPSQQTYRELTSTSNCTTFQARRLSVRY---RDENGKPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P L FV
Sbjct: 381 LATTRWIVAILENHQRADGSVRVPAALVPFV 411
Score = 45.8 bits (107), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L ++ P RY G S+CFR+E
Sbjct: 220 DDMYLVGTSEVPLAGYHADEILDLSAGPKRYAGWSSCFRREA 261
>gi|333992783|ref|YP_004525397.1| seryl-tRNA synthetase [Mycobacterium sp. JDM601]
gi|333488751|gb|AEF38143.1| seryl-tRNA synthetase SerS [Mycobacterium sp. JDM601]
Length = 420
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 119/205 (58%), Gaps = 8/205 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHADEILELSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P + E+ D ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEAFVYCRPAEAEAEH--DRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K A ATTR + AILE HQ
Sbjct: 335 WVPSQGTYRELTSTSNCTTFQARRLATRYRDDNGKPQTAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAG 215
G VR+P L +V L +G
Sbjct: 395 QPDGSVRVPAALVPYVGVEVLEPSG 419
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P + E+ D ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEAFVYCRPAEAEAEH--DRLLGWQREMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPSQGTYRELTSTSNCTTFQARRLATRY---RDDNGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L +V
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPAALVPYV 410
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L + P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHADEILELSGGPLRYAGWSSCFRREA 260
>gi|359770599|ref|ZP_09274072.1| seryl-tRNA synthetase [Gordonia effusa NBRC 100432]
gi|359312283|dbj|GAB16850.1| seryl-tRNA synthetase [Gordonia effusa NBRC 100432]
Length = 418
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H + L ++ P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 219 DDLYLVGTSEVPLAGYHSNEILDLSTGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ P D ++ + +++ +E A + + YRV+++ G L +AA+K D EAWF
Sbjct: 279 VEGFIYCKPEDADAEHL--KLLNWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWF 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC YQ+RRL +RY K +I AT ATTR I AILE HQ
Sbjct: 337 PTQNTYRELTSTSNCTTYQARRLAIRYRDDDGKPQIAATLNGTLATTRWIVAILENHQQS 396
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ L +FV
Sbjct: 397 DGTVVLPEELARFV 410
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D ++ +++ +E A + + YRV+++ G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCKPEDADAEHL--KLLNWEKEMLAAIDVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAWFP +REL S SNC YQ+RRL +RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWFPTQNTYRELTSTSNCTTYQARRLAIRY---RDDDGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V +P+ L +FV
Sbjct: 380 LATTRWIVAILENHQQSDGTVVLPEELARFV 410
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H + L ++ P RY G S+CFR+E
Sbjct: 219 DDLYLVGTSEVPLAGYHSNEILDLSTGPKRYAGWSSCFRREA 260
>gi|118486579|gb|ABK95128.1| unknown [Populus trichocarpa]
Length = 523
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 126/215 (58%), Gaps = 22/215 (10%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+ LI T+E P+ +H D+ L E LP++Y+ S CFR E G+ G TRG++RVHQF
Sbjct: 305 EGSDQCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYRVHQF 364
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVE FVL P + +S+ +E+I+ E+ ++ LG+ Y+ +++ SG L A +K D+EA
Sbjct: 365 TKVEMFVLCRPEESDSYH--EELIKIEEDLFSALGLHYKTLDMASGDLGAPAYRKFDVEA 422
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-------------------GQTKQKIYATAC 177
W PG G + E+ S SNC+DYQSRRL +RY Q + ATAC
Sbjct: 423 WMPGLGRYGEISSASNCIDYQSRRLGIRYRPSEPTPAPPKKGKGSLAPTQFVHTLNATAC 482
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFVPAVYL 211
A R+I +LE +Q E G V IP LR F+ + L
Sbjct: 483 AVPRMIVCLLENYQQEDGSVIIPGPLRAFMGGLEL 517
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 13/169 (7%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
+E A TRG++RVHQF KVE FVL P + +S+ +E+I+ E+ ++ LG+ Y+ +
Sbjct: 346 TEAGAAGTATRGLYRVHQFTKVEMFVLCRPEESDSYH--EELIKIEEDLFSALGLHYKTL 403
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY----------GQ 404
++ SG L A +K D+EAW PG G + E+ S SNC+ YQSRRL +RY +
Sbjct: 404 DMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCIDYQSRRLGIRYRPSEPTPAPPKK 463
Query: 405 TKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
K +FVH LNATACA R+I +LE +Q E G V IP LR F+
Sbjct: 464 GKGSLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSVIIPGPLRAFM 512
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRT 583
E D+ LI T+E P+ +H D+ L E LP++Y+ S CFR E A T
Sbjct: 305 EGSDQCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRTEAGAAGTAT 355
>gi|119714441|ref|YP_921406.1| seryl-tRNA synthetase [Nocardioides sp. JS614]
gi|166222755|sp|A1SD34.1|SYS_NOCSJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119535102|gb|ABL79719.1| seryl-tRNA synthetase [Nocardioides sp. JS614]
Length = 424
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D YL+ TSE P+ A H D L +LP+RY S CFR+E GSHG+DT+GI RVH F
Sbjct: 221 EGQDMYLVGTSEVPMAAYHSDEILDGGALPLRYAAFSPCFRKEAGSHGKDTKGIIRVHWF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV T+ +ES+ ++ +EF L +AYRV+++ +G L +A +K D EA
Sbjct: 281 DKVEMFVYTT--TEESYAEHQRLLAWEKEFLEKLELAYRVIDVAAGDLGLSAQRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLV--RYGQTKQKIY---ATACATTRVICAILETHQ 191
W P G +REL S SNC ++Q+RRL R+G + I T CA TR I A+LETHQ
Sbjct: 339 WIPTQGRYRELTSTSNCTEFQTRRLDTRGRFGSEIRPISTLNGTLCAITRTIVAVLETHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L+ ++
Sbjct: 399 QADGSVRVPKALQPWL 414
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GI RVH F+KVE FV T+ +ES+ ++ +EF L +AYRV+++ +G L
Sbjct: 270 DTKGIIRVHWFDKVEMFVYTT--TEESYAEHQRLLAWEKEFLEKLELAYRVIDVAAGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P G +REL S SNC +Q+RRL R + +I + LN T
Sbjct: 328 LSAQRKFDCEAWIPTQGRYRELTSTSNCTEFQTRRLDTR----GRFGSEIRPISTLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR I A+LETHQ G VR+P L+ ++
Sbjct: 384 CAITRTIVAVLETHQQADGSVRVPKALQPWL 414
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D YL+ TSE P+ A H D L +LP+RY S CFR+E
Sbjct: 221 EGQDMYLVGTSEVPMAAYHSDEILDGGALPLRYAAFSPCFRKEA 264
>gi|433632927|ref|YP_007266555.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070010]
gi|432164520|emb|CCK61978.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070010]
Length = 419
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D YL+ TSE P+ H L + P+RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E + ++ + A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P GA+REL S SNC +Q+RRL RY K +I AT TTR + AILE HQ
Sbjct: 335 WIPTQGAYRELTSTSNCTTFQARRLATRYRDASGKPQIAATLNGTLGTTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+PD L FV
Sbjct: 395 RPDGSVRVPDALVPFV 410
Score = 126 bits (316), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E + ++ + A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCTPADAEHEH--ERLLGWQRQMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P GA+REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
TTR + AILE HQ G VR+PD L FV
Sbjct: 380 LGTTRWLVAILENHQRPDGSVRVPDALVPFV 410
Score = 42.0 bits (97), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D YL+ TSE P+ H L + P+RY G S+CFR+E
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREA 260
>gi|406889257|gb|EKD35496.1| hypothetical protein ACD_75C01887G0001 [uncultured bacterium]
Length = 425
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 10/199 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D YLI T+E P+ +HRD L E LP++Y + CFR E GSHGRDTRG+ R HQF+KV
Sbjct: 229 DLYLIPTAEVPVTNIHRDETLAEKDLPVKYTAYTPCFRSEAGSHGRDTRGLIRQHQFDKV 288
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T+P ++ L+ ++ ++E LG+ YRVV + SG L +A K D+E W P
Sbjct: 289 ELVKFTTPETSDT--ELEALLVDAETVLQLLGLHYRVVALCSGDLGFSATKTYDIEVWLP 346
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIYAT----ACATTRVICAILETHQT 192
G +RE+ SCSN LD+Q+RR +RY GQ K K+ T A R + AILE +Q
Sbjct: 347 GQNTYREISSCSNFLDFQARRGGIRYRPEGQKKSKLVHTLNGSGLAVGRTLLAILENYQQ 406
Query: 193 ETG-VRIPDCLRKFVPAVY 210
E G +R+PD L+ + + +
Sbjct: 407 EDGSIRLPDVLKPYFASRF 425
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 92/158 (58%), Gaps = 11/158 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+KVE T+P ++ L+ ++ ++E LG+ YRVV + SG L
Sbjct: 275 DTRGLIRQHQFDKVELVKFTTPETSDT--ELEALLVDAETVLQLLGLHYRVVALCSGDLG 332
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY---GQTKKMNEKIEFVHMLN 419
+A K D+E W PG +RE+ SCSN L +Q+RR +RY GQ K + VH LN
Sbjct: 333 FSATKTYDIEVWLPGQNTYREISSCSNFLDFQARRGGIRYRPEGQKKS-----KLVHTLN 387
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVY 456
+ A R + AILE +Q E G +R+PD L+ + + +
Sbjct: 388 GSGLAVGRTLLAILENYQQEDGSIRLPDVLKPYFASRF 425
Score = 47.8 bits (112), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D YLI T+E P+ +HRD L E LP++Y + CFR E +
Sbjct: 229 DLYLIPTAEVPVTNIHRDETLAEKDLPVKYTAYTPCFRSEAGS 271
>gi|224063277|ref|XP_002301073.1| predicted protein [Populus trichocarpa]
gi|222842799|gb|EEE80346.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 126/215 (58%), Gaps = 22/215 (10%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+ LI T+E P+ +H D+ L E LP++Y+ S CFR E G+ G TRG++RVHQF
Sbjct: 305 EGSDQCLIGTAEIPVGGIHMDAILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYRVHQF 364
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVE FVL P + +S+ +E+I+ E+ ++ LG+ Y+ +++ SG L A +K D+EA
Sbjct: 365 TKVEMFVLCRPEESDSYH--EELIKIEEDLFSALGLHYKTLDMASGDLGAPAYRKFDVEA 422
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-------------------GQTKQKIYATAC 177
W PG G + E+ S SNC+DYQSRRL +RY Q + ATAC
Sbjct: 423 WMPGLGRYGEISSASNCIDYQSRRLGIRYRPSEPTPAPPKKGKGSLAPTQFVHTLNATAC 482
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFVPAVYL 211
A R+I +LE +Q E G V IP LR F+ + L
Sbjct: 483 AVPRMIVCLLENYQQEDGSVIIPGPLRAFMGGLEL 517
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 13/169 (7%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
+E A TRG++RVHQF KVE FVL P + +S+ +E+I+ E+ ++ LG+ Y+ +
Sbjct: 346 TEAGAAGTATRGLYRVHQFTKVEMFVLCRPEESDSYH--EELIKIEEDLFSALGLHYKTL 403
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY----------GQ 404
++ SG L A +K D+EAW PG G + E+ S SNC+ YQSRRL +RY +
Sbjct: 404 DMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCIDYQSRRLGIRYRPSEPTPAPPKK 463
Query: 405 TKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
K +FVH LNATACA R+I +LE +Q E G V IP LR F+
Sbjct: 464 GKGSLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSVIIPGPLRAFM 512
Score = 46.6 bits (109), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRT 583
E D+ LI T+E P+ +H D+ L E LP++Y+ S CFR E A T
Sbjct: 305 EGSDQCLIGTAEIPVGGIHMDAILAETQLPLKYVAYSHCFRTEAGAAGTAT 355
>gi|440704484|ref|ZP_20885330.1| serine--tRNA ligase [Streptomyces turgidiscabies Car8]
gi|440273859|gb|ELP62542.1| serine--tRNA ligase [Streptomyces turgidiscabies Car8]
Length = 429
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 120/202 (59%), Gaps = 16/202 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDADKLPMRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHD--DESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
+KVE F P D +E ++LD +++ L + ++V+++ SG L +A++K D
Sbjct: 281 DKVEMFSYVDPADAENEHQRLLDW----EKQWLTALELPFQVIDVASGDLGSSASRKFDC 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATTRVICA 185
EAW P G +REL S SNC +Q+RRL VR T + T CA R I A
Sbjct: 337 EAWIPTQGKYRELTSASNCDGFQARRLSVRMRDTSDGKNRVQPLATLNGTLCAVPRTIVA 396
Query: 186 ILETHQTETG-VRIPDCLRKFV 206
ILE HQ G VR+P+ LR ++
Sbjct: 397 ILENHQLADGSVRVPEVLRPYL 418
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D E+ ++ +++ L + ++V+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVDPADAENEHQ--RLLDWEKQWLTALELPFQVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR T +++ + LN T
Sbjct: 328 SSASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMRDTSDGKNRVQPLATLNGTL 387
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 388 CAVPRTIVAILENHQLADGSVRVPEVLRPYL 418
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D L LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEILDADKLPMRYAGFSPCFRREA 264
>gi|255324118|ref|ZP_05365242.1| serine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
gi|311740372|ref|ZP_07714201.1| serine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
gi|255298819|gb|EET78112.1| serine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
gi|311304556|gb|EFQ80630.1| serine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 418
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 116/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H+D + ++ P++Y G S+CFR+E GSHG+DTRGI RVHQF+K
Sbjct: 219 DDMYLVGTSEVALAGYHKDEIIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E FV P D E +M ++ ++ A + + YR ++I G L +AA+K D EAW
Sbjct: 279 LEMFVYCKPEDAE--EMHQRLLSMEKDMLAAMELPYRTIDIAGGDLGSSAARKFDNEAWV 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P G +REL S SNC +Q+RRL RY K A ATTR + AILE HQ
Sbjct: 337 PTQGTYRELTSTSNCTTFQARRLSTRYRDENGKTQTAATLNGTLATTRWLVAILENHQQA 396
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 397 DGSVVVPEALRPFV 410
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D E ++ ++ A + + YR ++I G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCKPEDAEEMHQ--RLLSMEKDMLAAMELPYRTIDIAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKFDNEAWVPTQGTYRELTSTSNCTTFQARRLSTRY---RDENGKTQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENHQQADGSVVVPEALRPFV 410
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H+D + ++ P++Y G S+CFR+E
Sbjct: 219 DDMYLVGTSEVALAGYHKDEIIDLSNGPLQYAGWSSCFRREA 260
>gi|433636932|ref|YP_007270559.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070017]
gi|432168525|emb|CCK66065.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070017]
Length = 419
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D YL+ TSE P+ H L + P+RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E + ++ + A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEHEH--EGLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P GA+REL S SNC +Q+RRL RY K +I AT TTR + AILE HQ
Sbjct: 335 WIPTQGAYRELTSTSNCTTFQARRLATRYRDASGKPQIAATLNGTLGTTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+PD L FV
Sbjct: 395 RPDGSVRVPDALVPFV 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E + ++ + A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCTPADAEHEH--EGLLGWQRQMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P GA+REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
TTR + AILE HQ G VR+PD L FV
Sbjct: 380 LGTTRWLVAILENHQRPDGSVRVPDALVPFV 410
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D YL+ TSE P+ H L + P+RY G S+CFR+E
Sbjct: 217 EGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREA 260
>gi|453379352|dbj|GAC85842.1| serine--tRNA ligase [Gordonia paraffinivorans NBRC 108238]
Length = 419
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 119/197 (60%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 276
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE FV P D E+ ++ +E A + + YRV+++ G L +AA+K D E
Sbjct: 277 FDKVEGFVYCKPEDAEAEHQ--RLLNWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCE 334
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETH 190
AW P +REL S SNC +Q+RRL +RY K ++ AT ATTR + AILE H
Sbjct: 335 AWIPTQNTYRELTSTSNCTTFQARRLSIRYRDSNGKPQVAATLNGTLATTRWLVAILENH 394
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V++P L KFV
Sbjct: 395 QQPDGSVKLPPELAKFV 411
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ ++ +E A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEGFVYCKPEDAEAEHQ--RLLNWEKEMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 325 SSAARKFDCEAWIPTQNTYRELTSTSNCTTFQARRLSIRY---RDSNGKPQVAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V++P L KFV
Sbjct: 381 LATTRWLVAILENHQQPDGSVKLPPELAKFV 411
Score = 47.4 bits (111), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREA 261
>gi|375139098|ref|YP_004999747.1| seryl-tRNA synthetase [Mycobacterium rhodesiae NBB3]
gi|359819719|gb|AEV72532.1| seryl-tRNA synthetase [Mycobacterium rhodesiae NBB3]
Length = 431
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 116/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H D L ++ P+RY G S+CFR+E GSHG+DTRGI RVHQF+K
Sbjct: 231 DDLYLVGTSEVALAGYHSDEILDLSNGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDK 290
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ P D E+ ++ + A++ + YRV++I +G L +AA+K D EAW
Sbjct: 291 VEGFIYCKPEDAETEHQ--RLLGWERQMLANIDVPYRVIDIAAGDLGSSAARKFDCEAWI 348
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL VRY K A ATTR + AILE HQ
Sbjct: 349 PTQNTYRELTSTSNCTTFQARRLAVRYRDENGKPQTAATLNGTLATTRWLVAILENHQQP 408
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ L FV
Sbjct: 409 DGSVRVPEALVPFV 422
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ ++ + A++ + YRV++I +G L
Sbjct: 278 DTRGIIRVHQFDKVEGFIYCKPEDAETEH--QRLLGWERQMLANIDVPYRVIDIAAGDLG 335
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 336 SSAARKFDCEAWIPTQNTYRELTSTSNCTTFQARRLAVRY---RDENGKPQTAATLNGT- 391
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P+ L FV
Sbjct: 392 LATTRWLVAILENHQQPDGSVRVPEALVPFV 422
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H D L ++ P+RY G S+CFR+E
Sbjct: 231 DDLYLVGTSEVALAGYHSDEILDLSNGPLRYAGWSSCFRREA 272
>gi|383821245|ref|ZP_09976492.1| seryl-tRNA synthetase [Mycobacterium phlei RIVM601174]
gi|383333573|gb|EID12023.1| seryl-tRNA synthetase [Mycobacterium phlei RIVM601174]
Length = 419
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 120/202 (59%), Gaps = 8/202 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D + + P RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 EADDMYLVGTSEVPLAGYHADEIIDLSDGPRRYAGWSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P + E+ + ++ E A + + YRV++I +G L +AA+K D EA
Sbjct: 277 DKVEGFVFCKPEEAEAEH--ERLLNLQREMLAKIEVPYRVIDIAAGDLGSSAARKYDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WIPTQQTYRELTSTSNCTTFQARRLSTRYRDENGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLN 212
G VR+P L FV A L+
Sbjct: 395 QPDGSVRVPAALVPFVGAEVLS 416
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P + E+ + ++ E A + + YRV++I +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVFCKPEEAEAEH--ERLLNLQREMLAKIEVPYRVIDIAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKYDCEAWIPTQQTYRELTSTSNCTTFQARRLSTRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
ATTR + AILE HQ G VR+P L FV A
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPAALVPFVGA 412
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D + + P RY G S+CFR+E
Sbjct: 217 EADDMYLVGTSEVPLAGYHADEIIDLSDGPRRYAGWSSCFRREA 260
>gi|352682817|ref|YP_004893341.1| seryl-tRNA synthetase [Thermoproteus tenax Kra 1]
gi|350275616|emb|CCC82263.1| Seryl-tRNA synthetase [Thermoproteus tenax Kra 1]
Length = 453
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIAT+E I A L E LP Y+G S CFR+E G+ RD +GIFRVH F K
Sbjct: 243 EDLYLIATAEHGIAAYLYGRDLLEGDLPQLYVGWSPCFRKEAGAGSRDIKGIFRVHIFHK 302
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV + +ESW+ +E+ +N+EE LG+ YRVVNI + L AAKK D+E W+
Sbjct: 303 VEQFVFSVA--EESWRWHEEITKNTEELIQALGLPYRVVNICAHDLGAPAAKKYDVEVWY 360
Query: 139 PGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIYATAC---ATTRVICAILETHQT 192
P G FREL SCSN D+Q+ RL + R G ++ ++ C ATTR I AILE +Q
Sbjct: 361 PAQGTFRELASCSNVTDWQAFRLGIRVTRKGMKREYVHTLNCTGLATTRTITAILENYQR 420
Query: 193 ETG-VRIPDCLRKFVPAV 209
E G V IP LR ++ +
Sbjct: 421 EDGAVEIPKVLRGYLEPI 438
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVH F KVEQFV + +ESW+ +E+ +N+EE LG+ YRVVNI + L
Sbjct: 290 DIKGIFRVHIFHKVEQFVFSVA--EESWRWHEEITKNTEELIQALGLPYRVVNICAHDLG 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W+P G FREL SCSN +Q+ RL +R + K E+VH LN T
Sbjct: 348 APAAKKYDVEVWYPAQGTFRELASCSNVTDWQAFRLGIR---VTRKGMKREYVHTLNCTG 404
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AILE +Q E G V IP LR ++ +
Sbjct: 405 LATTRTITAILENYQREDGAVEIPKVLRGYLEPI 438
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
+D YLIAT+E I A L E LP Y+G S CFR+E AG
Sbjct: 243 EDLYLIATAEHGIAAYLYGRDLLEGDLPQLYVGWSPCFRKEAGAG 287
>gi|182437423|ref|YP_001825142.1| seryl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326778079|ref|ZP_08237344.1| Seryl-tRNA synthetase [Streptomyces griseus XylebKG-1]
gi|238688982|sp|B1VP80.1|SYS_STRGG RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|178465939|dbj|BAG20459.1| putative seryl-tRNA synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326658412|gb|EGE43258.1| Seryl-tRNA synthetase [Streptomyces griseus XylebKG-1]
Length = 425
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D E+ ++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVDPADAEAEHR--RLLDWEKQWLTALELPFQVIDVATGDLGSSASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR + K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRMREGKKVQPLATLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LPDGSVRVPEMLRPYL 414
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D E+ ++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVDPADAEAEHR--RLLDWEKQWLTALELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR + K K++ + LN T
Sbjct: 328 SSASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMREGK----KVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQLPDGSVRVPEMLRPYL 414
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREA 264
>gi|183985354|ref|YP_001853645.1| seryl-tRNA synthetase [Mycobacterium marinum M]
gi|238690931|sp|B2HMM1.1|SYS_MYCMM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|183178680|gb|ACC43790.1| seryl-tRNA synthetase SerS [Mycobacterium marinum M]
Length = 419
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D + + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E+ ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEAEHQ--RLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K +I AT TTR + +ILE HQ
Sbjct: 335 WVPTQGTYRELTSTSNCTTFQARRLATRYRDANGKPQIAATLNGTLGTTRWLVSILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAG 215
G VR+P L FV L G
Sbjct: 395 QPDGSVRVPAALVGFVGTEVLEPKG 419
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E+ ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCTPADAEAEH--QRLLAWQREMLAQIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 ASAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLATRY---RDANGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
TTR + +ILE HQ G VR+P L FV
Sbjct: 380 LGTTRWLVSILENHQQPDGSVRVPAALVGFV 410
Score = 46.2 bits (108), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D + + P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREA 260
>gi|443493409|ref|YP_007371556.1| seryl-tRNA synthetase SerS [Mycobacterium liflandii 128FXT]
gi|442585906|gb|AGC65049.1| seryl-tRNA synthetase SerS [Mycobacterium liflandii 128FXT]
Length = 419
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D + + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E+ ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCAPADAEAEHQ--RLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K +I AT TTR + +ILE HQ
Sbjct: 335 WIPTQGTYRELTSTSNCTTFQARRLATRYRDANGKPQIAATLNGTLGTTRWLVSILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAG 215
G VR+P L FV L G
Sbjct: 395 QPDGSVRVPAALVGFVGTEVLEPKG 419
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E+ ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCAPADAEAEH--QRLLAWQREMLAQIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 ASAARKFDCEAWIPTQGTYRELTSTSNCTTFQARRLATRY---RDANGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
TTR + +ILE HQ G VR+P L FV
Sbjct: 380 LGTTRWLVSILENHQQPDGSVRVPAALVGFV 410
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D + + P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREA 260
>gi|433457255|ref|ZP_20415263.1| seryl-tRNA ligase [Arthrobacter crystallopoietes BAB-32]
gi|432195153|gb|ELK51712.1| seryl-tRNA ligase [Arthrobacter crystallopoietes BAB-32]
Length = 427
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 121/197 (61%), Gaps = 11/197 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L + P+RY G S+C+R+E GSHG+DTRGI RVHQF K
Sbjct: 223 DDLYLVGTSEVPLAGYHADEILDLSGGPLRYAGWSSCYRREAGSHGKDTRGIIRVHQFNK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ T+ DE+ K + ++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 283 VEMFIYTTV--DEAAKEHERLLAWEEEMLAKVELPYRVIDTAAGDLGTSAARKFDCEAWV 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVR---YGQTKQKIYATAC-----ATTRVICAILETH 190
P A+REL S SNC +Q+RRL VR G+ K+ A A ATTR I AILE H
Sbjct: 341 PTQNAYRELTSTSNCTTFQARRLNVRERVAGEEKKGTRAVATLNGTLATTRWIVAILEHH 400
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V +P+ LR ++
Sbjct: 401 QNADGSVTVPEALRPYL 417
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 92/156 (58%), Gaps = 4/156 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE F+ T+ DE+ K + ++ EE A + + YRV++ +G L
Sbjct: 270 DTRGIIRVHQFNKVEMFIYTTV--DEAAKEHERLLAWEEEMLAKVELPYRVIDTAAGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VR + + V LN T
Sbjct: 328 TSAARKFDCEAWVPTQNAYRELTSTSNCTTFQARRLNVRERVAGEEKKGTRAVATLNGT- 386
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
ATTR I AILE HQ G V +P+ LR ++ + V
Sbjct: 387 LATTRWIVAILEHHQNADGSVTVPEALRPYLGGMEV 422
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L + P+RY G S+C+R+E
Sbjct: 223 DDLYLVGTSEVPLAGYHADEILDLSGGPLRYAGWSSCYRREA 264
>gi|300782127|ref|YP_003762418.1| seryl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|384145332|ref|YP_005528148.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
gi|399534009|ref|YP_006546671.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
gi|299791641|gb|ADJ42016.1| seryl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|340523486|gb|AEK38691.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
gi|398314779|gb|AFO73726.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
Length = 394
Score = 169 bits (428), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L P RY G S+C+R+E GS+G+DTRGI RVHQF+K
Sbjct: 194 DDLYLVGTSEVPLAGFHADEILDLNDGPNRYAGWSSCYRREAGSYGKDTRGIIRVHQFDK 253
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P D E+ + ++ E+ A + + YRV++ +G L +A +K D EAW
Sbjct: 254 VEMFVYAKPADAEAEH--ERLLGWEEQMLAKIEVPYRVIDTATGDLGTSAHRKFDCEAWI 311
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL +RY K +I AT ATTR I AI+E HQ E
Sbjct: 312 PTQETYRELTSTSNCTTFQARRLAIRYRDDNGKPQIAATLNGTLATTRWIVAIVENHQQE 371
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR FV
Sbjct: 372 DGSVRVPEALRPFV 385
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ + ++ E+ A + + YRV++ +G L
Sbjct: 241 DTRGIIRVHQFDKVEMFVYAKPADAEAEH--ERLLGWEEQMLAKIEVPYRVIDTATGDLG 298
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 299 TSAHRKFDCEAWIPTQETYRELTSTSNCTTFQARRLAIRY---RDDNGKPQIAATLNGT- 354
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AI+E HQ E G VR+P+ LR FV
Sbjct: 355 LATTRWIVAIVENHQQEDGSVRVPEALRPFV 385
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L P RY G S+C+R+E
Sbjct: 194 DDLYLVGTSEVPLAGFHADEILDLNDGPNRYAGWSSCYRREA 235
>gi|408679452|ref|YP_006879279.1| Seryl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
gi|328883781|emb|CCA57020.1| Seryl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
Length = 429
Score = 169 bits (428), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 122/200 (61%), Gaps = 12/200 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P D E+ +++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVAPEDAEAEH--KRLLEWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIY-------ATACATTRVICAIL 187
W P G +REL S SNC +Q+RRL VR Q +K+ T CA R I AIL
Sbjct: 339 WIPTQGKYRELTSASNCDSFQARRLSVRMRDDQGGKKVVQPLATLNGTLCAVPRTIVAIL 398
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E HQ G VR+P+ LR ++
Sbjct: 399 ENHQLADGSVRVPEMLRPYL 418
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPEDAEAEHK--RLLEWEKQWLTGLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC ++Q+RRL VR + + ++ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSASNCDSFQARRLSVRMRDDQGGKKVVQPLATLNGTL 387
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 388 CAVPRTIVAILENHQLADGSVRVPEMLRPYL 418
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREA 264
>gi|345000931|ref|YP_004803785.1| seryl-tRNA synthetase [Streptomyces sp. SirexAA-E]
gi|344316557|gb|AEN11245.1| seryl-tRNA synthetase [Streptomyces sp. SirexAA-E]
Length = 425
Score = 169 bits (428), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D E+ ++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVDPADAEAEHR--RLLDWEKQWLTALELPFQVIDVATGDLGASASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR K+ + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRMRDGKKVQPLSTLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LADGSVRVPEILRPYL 414
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D E+ ++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVDPADAEAEHR--RLLDWEKQWLTALELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K K++ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLSTLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQLADGSVRVPEILRPYL 414
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIEADKLPLRYAGFSPCFRREA 264
>gi|403251675|ref|ZP_10918005.1| seryl-tRNA synthetase [actinobacterium SCGC AAA027-L06]
gi|402915025|gb|EJX36018.1| seryl-tRNA synthetase [actinobacterium SCGC AAA027-L06]
Length = 420
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 120/194 (61%), Gaps = 10/194 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ YL+ TSE P+ A H D L + LPIRY G S CFR+E GS+G+DTRGI RVHQFEK
Sbjct: 223 DELYLVGTSEVPLAAYHMDEILEQ--LPIRYAGYSPCFRREAGSYGKDTRGIIRVHQFEK 280
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D ++ +++++ ++F+ L I Y+V+++ SG L +A +K D+EAW
Sbjct: 281 VEMFTFCKPEDAQAEH--EKLLKWEKDFFDSLEIPYQVIDVASGDLGASAVRKFDIEAWI 338
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILETHQTE 193
P A+RE+ S SNC +Q+RRL +RY K + T A R I AILE +Q +
Sbjct: 339 PTQQAYREVTSTSNCTQFQARRLNIRYKDEKATKPVATLNGTLVAVPRTIVAILENYQQK 398
Query: 194 TG-VRIPDCLRKFV 206
G V++P L F+
Sbjct: 399 DGSVKVPKALIPFI 412
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQFEKVE F P D ++ +++++ ++F+ L I Y+V+++ SG L
Sbjct: 268 DTRGIIRVHQFEKVEMFTFCKPEDAQAEH--EKLLKWEKDFFDSLEIPYQVIDVASGDLG 325
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D+EAW P A+RE+ S SNC +Q+RRL +RY K V LN T
Sbjct: 326 ASAVRKFDIEAWIPTQQAYREVTSTSNCTQFQARRLNIRYKDEKATKP----VATLNGTL 381
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R I AILE +Q + G V++P L F+
Sbjct: 382 VAVPRTIVAILENYQQKDGSVKVPKALIPFI 412
Score = 47.4 bits (111), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ YL+ TSE P+ A H D L + LPIRY G S CFR+E
Sbjct: 223 DELYLVGTSEVPLAAYHMDEILEQ--LPIRYAGYSPCFRREA 262
>gi|239989205|ref|ZP_04709869.1| seryl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291446211|ref|ZP_06585601.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces roseosporus NRRL
15998]
gi|291349158|gb|EFE76062.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces roseosporus NRRL
15998]
Length = 425
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D E+ +++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVDPADAEAEHR--RLLEWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR K+ + T CA R I A+LE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRMRDGKKVQPLATLNGTLCAVPRTIVALLENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LPDGSVRVPEVLRPYL 414
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D E+ +++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVDPADAEAEHR--RLLEWEKQWLTGLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K K++ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I A+LE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVALLENHQLPDGSVRVPEVLRPYL 414
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREA 264
>gi|411003781|ref|ZP_11380110.1| seryl-tRNA ligase [Streptomyces globisporus C-1027]
Length = 425
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D E+ +++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVDPADAEAEHR--RLLEWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR K+ + T CA R I A+LE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRMRDGKKVQPLATLNGTLCAVPRTIVALLENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LPDGSVRVPEVLRPYL 414
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D E+ +++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVDPADAEAEHR--RLLEWEKQWLTGLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K K++ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I A+LE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVALLENHQLPDGSVRVPEVLRPYL 414
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREA 264
>gi|452954621|gb|EME60021.1| seryl-tRNA ligase [Amycolatopsis decaplanina DSM 44594]
Length = 422
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 117/195 (60%), Gaps = 10/195 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L P RY G S+C+R+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHADEILDLGDGPKRYAGWSSCYRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV T P D E+ ++ E+ A + + YRV++ +G L +A +K D EAW
Sbjct: 280 VEMFVYTRPEDAEAEHA--RLLDWEEQMLAKIEVPYRVIDTATGDLGTSAYRKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETHQT 192
P +REL S SNC +Q+RRL +RY QT + T ATTR I AILE HQ
Sbjct: 338 PSQQTYRELTSTSNCTTFQARRLGIRYRDDDGRPQTVATLNGT-LATTRWIVAILENHQL 396
Query: 193 ETG-VRIPDCLRKFV 206
E G VR+P+ LR F+
Sbjct: 397 EDGSVRVPEALRPFL 411
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV T P D E+ ++ E+ A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVYTRPEDAEAEHA--RLLDWEEQMLAKIEVPYRVIDTATGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P +REL S SNC +Q+RRL +RY + + + + V LN T
Sbjct: 325 TSAYRKFDCEAWVPSQQTYRELTSTSNCTTFQARRLGIRY---RDDDGRPQTVATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
ATTR I AILE HQ E G VR+P+ LR F+ V
Sbjct: 381 LATTRWIVAILENHQLEDGSVRVPEALRPFLGGTEV 416
Score = 43.5 bits (101), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L P RY G S+C+R+E
Sbjct: 220 DDLYLVGTSEVPLAGYHADEILDLGDGPKRYAGWSSCYRREA 261
>gi|206901603|ref|YP_002251096.1| seryl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
gi|238065098|sp|B5YEY8.1|SYS_DICT6 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|206740706|gb|ACI19764.1| seryl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
Length = 425
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 120/194 (61%), Gaps = 9/194 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D LIAT+E + H+D L E LP++YLG S CFR E G++GR RG++RVHQF K
Sbjct: 225 DLGLIATAEITLGGYHKDEILDELDLPLKYLGFSHCFRTEAGAYGRYNRGLYRVHQFSKA 284
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E F++ P D E +M + ++ E+ + L I YRVV+I SG L AA+K D+EAW P
Sbjct: 285 EIFIICRPEDSE--EMHEYILSLEEKIFQKLEIPYRVVDICSGDLGAPAARKFDIEAWMP 342
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI------YATACATTRVICAILETHQTE 193
G G F E+ SCSNC DYQ+RRL +R+ + ++ TA A +R + AILE +Q E
Sbjct: 343 GRGDFGEVTSCSNCTDYQARRLNIRFRRVTGEVEYVHMLNGTAIAISRALIAILENYQQE 402
Query: 194 TG-VRIPDCLRKFV 206
G + IP L+ ++
Sbjct: 403 DGSILIPKVLQPYI 416
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 96/150 (64%), Gaps = 6/150 (4%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
RG++RVHQF K E F++ P D E + ++ E+ + L I YRVV+I SG L
Sbjct: 272 NRGLYRVHQFSKAEIFIICRPEDSEEMH--EYILSLEEKIFQKLEIPYRVVDICSGDLGA 329
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 423
AA+K D+EAW PG G F E+ SCSNC YQ+RRL +R+ +++ ++E+VHMLN TA
Sbjct: 330 PAARKFDIEAWMPGRGDFGEVTSCSNCTDYQARRLNIRF---RRVTGEVEYVHMLNGTAI 386
Query: 424 ATTRVICAILETHQTETG-VRIPDCLRKFV 452
A +R + AILE +Q E G + IP L+ ++
Sbjct: 387 AISRALIAILENYQQEDGSILIPKVLQPYI 416
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D LIAT+E + H+D L E LP++YLG S CFR E A
Sbjct: 225 DLGLIATAEITLGGYHKDEILDELDLPLKYLGFSHCFRTEAGA 267
>gi|451332640|ref|ZP_21903229.1| Seryl-tRNA synthetase [Amycolatopsis azurea DSM 43854]
gi|449424787|gb|EMD30072.1| Seryl-tRNA synthetase [Amycolatopsis azurea DSM 43854]
Length = 396
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 117/195 (60%), Gaps = 10/195 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L P RY G S+C+R+E GS+G+DTRGI RVHQF+K
Sbjct: 194 DDLYLVGTSEVPLAGYHADEILDLGKGPKRYAGWSSCYRREAGSYGKDTRGIIRVHQFDK 253
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV T P D E+ ++ E+ A + + YRV++ +G L +A +K D EAW
Sbjct: 254 VEMFVYTRPEDAEAEHA--RLLDWEEQMLAKIEVPYRVIDTATGDLGTSAYRKFDCEAWV 311
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETHQT 192
P +REL S SNC +Q+RRL +RY QT + T ATTR I AILE HQ
Sbjct: 312 PSQETYRELTSTSNCTTFQARRLGIRYRDDDGRPQTVATLNGT-LATTRWIVAILENHQL 370
Query: 193 ETG-VRIPDCLRKFV 206
E G VR+P+ LR F+
Sbjct: 371 EDGSVRVPEALRPFL 385
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV T P D E+ ++ E+ A + + YRV++ +G L
Sbjct: 241 DTRGIIRVHQFDKVEMFVYTRPEDAEAEHA--RLLDWEEQMLAKIEVPYRVIDTATGDLG 298
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P +REL S SNC +Q+RRL +RY + + + + V LN T
Sbjct: 299 TSAYRKFDCEAWVPSQETYRELTSTSNCTTFQARRLGIRY---RDDDGRPQTVATLNGT- 354
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
ATTR I AILE HQ E G VR+P+ LR F+ V
Sbjct: 355 LATTRWIVAILENHQLEDGSVRVPEALRPFLGGTEV 390
Score = 43.5 bits (101), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L P RY G S+C+R+E
Sbjct: 194 DDLYLVGTSEVPLAGYHADEILDLGKGPKRYAGWSSCYRREA 235
>gi|392418768|ref|YP_006455373.1| seryl-tRNA synthetase [Mycobacterium chubuense NBB4]
gi|390618544|gb|AFM19694.1| seryl-tRNA synthetase [Mycobacterium chubuense NBB4]
Length = 419
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 121/205 (59%), Gaps = 8/205 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D + ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGFHADEIVDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P + E+ + ++ + A + + YRV++I +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCRPEEAEAEH--ERLLGWQRQMLAHIEVPYRVIDIAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL VRY K A ATTR + AILE HQ
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLAVRYRDENGKPQTAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAG 215
G VRIP+ L +V A L G
Sbjct: 395 QPDGSVRIPEALVPYVGAEVLTPKG 419
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 93/160 (58%), Gaps = 7/160 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P + E+ + ++ + A + + YRV++I +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCRPEEAEAEH--ERLLGWQRQMLAHIEVPYRVIDIAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQNTYRELTSTSNCTTFQARRLAVRY---RDENGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAG 461
ATTR + AILE HQ G VRIP+ L +V A + G
Sbjct: 380 LATTRWLVAILENHQQPDGSVRIPEALVPYVGAEVLTPKG 419
Score = 47.4 bits (111), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D + ++ P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGFHADEIVDLSAGPLRYAGWSSCFRREA 260
>gi|329938706|ref|ZP_08288102.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
gi|329302197|gb|EGG46089.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
Length = 425
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 121/198 (61%), Gaps = 12/198 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDLYLVGTSEVPLAAYHMDEIIDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPH--DDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
+KVE F P ++E ++LD +++ L + ++V+++ +G L +A++K D
Sbjct: 281 DKVEMFTFVDPSEAENEHRRLLD----WEKQWLTSLELPFQVIDVATGDLGASASRKFDC 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILET 189
EAW P G +REL S SNC +Q+RRL VR K+ + T CA R I A+LE
Sbjct: 337 EAWIPTQGKYRELTSASNCDGFQARRLSVRMRDGKKVQPLSTLNGTLCAVPRTIVALLEN 396
Query: 190 HQTETG-VRIPDCLRKFV 206
HQ G VR+P+ LR ++
Sbjct: 397 HQLADGSVRVPEVLRPYL 414
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P + E+ ++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFTFVDPSEAENEHR--RLLDWEKQWLTSLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K K++ + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLSTLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I A+LE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVALLENHQLADGSVRVPEVLRPYL 414
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDLYLVGTSEVPLAAYHMDEIIDAEKLPLRYAGFSPCFRREA 264
>gi|407936588|ref|YP_006852230.1| seryl-tRNA ligase [Propionibacterium acnes C1]
gi|407905169|gb|AFU41999.1| seryl-tRNA ligase [Propionibacterium acnes C1]
Length = 424
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +RY + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRYRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +RY + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRY----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.8 bits (112), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|407641279|ref|YP_006805038.1| seryl-tRNA ligase [Nocardia brasiliensis ATCC 700358]
gi|407304163|gb|AFT98063.1| seryl-tRNA ligase [Nocardia brasiliensis ATCC 700358]
Length = 420
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L + P RY G STCFR+E GS+G+DTRGI RVHQF
Sbjct: 218 EEDDLYLVGTSEVPLAGYHSDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV T+P ++ ++ ++ A + + YRV+++ +G L +AA+K D EA
Sbjct: 278 DKIEMFVFTTPEQADAEH--KRLLAWEQDMLAAVEVPYRVIDVAAGDLGSSAARKFDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL VRY K +I AT ATTR I AILE HQ
Sbjct: 336 WVPTQQTYRELTSTSNCTTFQARRLAVRYRDENGKPQIAATLNGTLATTRWIVAILENHQ 395
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 396 QADGSVRVPAALVPFV 411
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV T+P ++ ++ ++ A + + YRV+++ +G L
Sbjct: 267 DTRGIIRVHQFDKIEMFVFTTPEQADAEHK--RLLAWEQDMLAAVEVPYRVIDVAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLAVRY---RDENGKPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P L FV
Sbjct: 381 LATTRWIVAILENHQQADGSVRVPAALVPFV 411
Score = 47.0 bits (110), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 218 EEDDLYLVGTSEVPLAGYHSDEILDLSDGPKRYAGWSTCFRREA 261
>gi|18313866|ref|NP_560533.1| seryl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
gi|30173195|sp|Q8ZTP4.1|SYS_PYRAE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|18161431|gb|AAL64715.1| seryl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
Length = 451
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIAT+E I A L E LP Y+G S CFR+E G+ RD +GIFRVH F K
Sbjct: 240 EDLYLIATAEHGIAAYLYKRELLEEELPQLYVGWSPCFRKEAGAGSRDIKGIFRVHIFHK 299
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV + P D SWK +E+ +N+EE LG+ YRVVNI + L AAKK D+E W+
Sbjct: 300 VEQFVFSLPED--SWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIEVWY 357
Query: 139 PGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIYATAC---ATTRVICAILETHQT 192
P G +REL SCSN D+QS RL + R G ++ ++ C ATTR I AILE Q
Sbjct: 358 PSQGMYRELASCSNVTDWQSYRLGIRVTRKGMKREYVHTLNCTGLATTRTITAILENFQR 417
Query: 193 ETG-VRIPDCLRKFVPAV 209
E G V IP LR+++ +
Sbjct: 418 EDGAVEIPKVLRQYLEPI 435
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVH F KVEQFV + P D SWK +E+ +N+EE LG+ YRVVNI + L
Sbjct: 287 DIKGIFRVHIFHKVEQFVFSLPED--SWKWHEEITKNTEELIRGLGLPYRVVNICAHDLG 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W+P G +REL SCSN +QS RL +R + K E+VH LN T
Sbjct: 345 APAAKKYDIEVWYPSQGMYRELASCSNVTDWQSYRLGIR---VTRKGMKREYVHTLNCTG 401
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AILE Q E G V IP LR+++ +
Sbjct: 402 LATTRTITAILENFQREDGAVEIPKVLRQYLEPI 435
>gi|453365008|dbj|GAC79260.1| seryl-tRNA synthetase [Gordonia malaquae NBRC 108250]
Length = 418
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 118/197 (59%), Gaps = 10/197 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L + P RY G STCFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDMYLVGTSEVPLAGYHSDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E+ ++ ++ A + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKVEGFVYCRPEDAEAEHQ--RLLAWEKDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETH 190
W P +REL S SNC +Q+RRL VRY QT + T ATTR + AILE H
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLQVRYRDENGKAQTAATLNGT-LATTRWLVAILENH 393
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V++P+ L +FV
Sbjct: 394 QQADGSVKLPEELARFV 410
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ ++ ++ A + + YRV+++ G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCRPEDAEAEHQ--RLLAWEKDMLAAIDVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQNTYRELTSTSNCTTFQARRLQVRY---RDENGKAQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V++P+ L +FV
Sbjct: 380 LATTRWLVAILENHQQADGSVKLPEELARFV 410
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 217 EADDMYLVGTSEVPLAGYHSDEILDLSDGPKRYAGWSTCFRREA 260
>gi|451980311|ref|ZP_21928707.1| Seryl-tRNA synthetase [Nitrospina gracilis 3/211]
gi|451762481|emb|CCQ89938.1| Seryl-tRNA synthetase [Nitrospina gracilis 3/211]
Length = 426
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 118/200 (59%), Gaps = 9/200 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLI T+E P+ HRD L E LP++Y + CFR+E GS+G+DT GI R HQF+K
Sbjct: 224 DDYYLIPTAEVPVTNYHRDEILKEDDLPVKYTAYTLCFRREAGSYGKDTHGIIRQHQFDK 283
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE ++ H D SW L++++ ++E LG+ YRV+N+ SG L +AAK D+E W
Sbjct: 284 VE--LVQFAHPDRSWDELEKLLTHAESILQKLGLYYRVMNLCSGDLGFSAAKTYDIEVWL 341
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETHQT 192
P FRE+ SCSN DYQ+RR +RY Q + + A R+ AILE +Q
Sbjct: 342 PTQDTFREISSCSNFTDYQARRAKIRYKSKDGGNQLVHTLNGSGVAAGRLFVAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFVPAVYL 211
G V +P+ LR ++ + L
Sbjct: 402 ADGTVVVPEALRPYMHGLEL 421
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GI R HQF+KVE ++ H D SW L++++ ++E LG+ YRV+N+ SG L
Sbjct: 271 DTHGIIRQHQFDKVE--LVQFAHPDRSWDELEKLLTHAESILQKLGLYYRVMNLCSGDLG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK D+E W P FRE+ SCSN YQ+RR +RY N + VH LN +
Sbjct: 329 FSAAKTYDIEVWLPTQDTFREISSCSNFTDYQARRAKIRYKSKDGGN---QLVHTLNGSG 385
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R+ AILE +Q G V +P+ LR ++
Sbjct: 386 VAAGRLFVAILENYQQADGTVVVPEALRPYM 416
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YLI T+E P+ HRD L E LP++Y + CFR+E
Sbjct: 224 DDYYLIPTAEVPVTNYHRDEILKEDDLPVKYTAYTLCFRREA 265
>gi|297564185|ref|YP_003683158.1| seryl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848634|gb|ADH70652.1| seryl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 436
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H LP +LP RY+G S CFR+E GS+G+DTRGI RVHQF K
Sbjct: 233 DDLYLVGTSEVPLAGYHSGEILPADALPNRYIGWSPCFRREAGSYGKDTRGIIRVHQFNK 292
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV T H D++ + ++ E L + YRVV+I G L +AA+K D EAW
Sbjct: 293 VEMFVYT--HPDQAHEEHKRLLAWEREMLDKLELPYRVVDIAGGDLGTSAARKYDCEAWV 350
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC ++Q+RRL VR+ K + AT ATTR I AILE HQ E
Sbjct: 351 PTQETYRELTSTSNCTEFQARRLNVRFRDEDGKPRFAATLNGTLATTRWIVAILENHQRE 410
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR ++
Sbjct: 411 DGSVVVPEALRPYL 424
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE FV T H D++ + ++ E L + YRVV+I G L
Sbjct: 280 DTRGIIRVHQFNKVEMFVYT--HPDQAHEEHKRLLAWEREMLDKLELPYRVVDIAGGDLG 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VR+ + + K F LN T
Sbjct: 338 TSAARKYDCEAWVPTQETYRELTSTSNCTEFQARRLNVRF---RDEDGKPRFAATLNGT- 393
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ E G V +P+ LR ++
Sbjct: 394 LATTRWIVAILENHQREDGSVVVPEALRPYL 424
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H LP +LP RY+G S CFR+E
Sbjct: 233 DDLYLVGTSEVPLAGYHSGEILPADALPNRYIGWSPCFRREA 274
>gi|408825617|ref|ZP_11210507.1| seryl-tRNA ligase [Streptomyces somaliensis DSM 40738]
Length = 425
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D L LP+RY G S C+R+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCYRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P D E+ +++ +++ L + ++V+++ SG L +A++K D EA
Sbjct: 281 DKVEMFCYVAPEDAEAEHR--RLLEWEKQWLTALELPFQVIDVASGDLGASASRKYDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR Q + T CA R I AILE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDGFQARRLSVRMRDGNRVQPLATLNGTLCAVPRTIVAILENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 LADGSVRVPEVLRPYL 414
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P D E+ +++ +++ L + ++V+++ SG L
Sbjct: 270 DTRGIFRVHQFDKVEMFCYVAPEDAEAEHR--RLLEWEKQWLTALELPFQVIDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR + +++ + LN T
Sbjct: 328 ASASRKYDCEAWIPTQGKYRELTSASNCDGFQARRLSVRM----RDGNRVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVAILENHQLADGSVRVPEVLRPYL 414
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D L LP+RY G S C+R+E
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEILDADKLPLRYAGFSPCYRREA 264
>gi|41406295|ref|NP_959131.1| seryl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|417746603|ref|ZP_12395097.1| seryl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
S397]
gi|67461823|sp|Q745I8.1|SYS_MYCPA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|41394643|gb|AAS02514.1| SerS [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461883|gb|EGO40738.1| seryl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
S397]
Length = 425
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 122/208 (58%), Gaps = 11/208 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L ++ P+RY G S+CFR+E GS+G+DTRG+ RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHADEILDLSAGPLRYAGWSSCFRREAGSYGKDTRGVIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E+ ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEAEHQ--RLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYAT---ACATTRVICAILE 188
W P +REL S SNC +Q+RRL RY + K +I AT TTR + AILE
Sbjct: 335 WVPTQQTYRELTSTSNCTTFQARRLSTRYRDGGDAKGKPQIAATLNGTLGTTRWLVAILE 394
Query: 189 THQTETG-VRIPDCLRKFVPAVYLNEAG 215
HQ G VR+P+ L FV L G
Sbjct: 395 NHQQPDGSVRVPEALVPFVGTELLEPVG 422
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 4/151 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ RVHQF+KVE FV +P D E+ ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGVIRVHQFDKVEGFVYCTPADAEAEH--QRLLGWQREMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLSTRYRDGGDAKGKPQIAATLNGT- 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
TTR + AILE HQ G VR+P+ L FV
Sbjct: 383 LGTTRWLVAILENHQQPDGSVRVPEALVPFV 413
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L ++ P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHADEILDLSAGPLRYAGWSSCFRREA 260
>gi|359765922|ref|ZP_09269741.1| seryl-tRNA synthetase [Gordonia polyisoprenivorans NBRC 16320]
gi|359316558|dbj|GAB22574.1| seryl-tRNA synthetase [Gordonia polyisoprenivorans NBRC 16320]
Length = 418
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H + L + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 216 DKEDDLYLVGTSEVPLAGYHMNEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 275
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE F+ P D E+ +++ +E A + + YRV+++ G L +AA+K D E
Sbjct: 276 FDKVEGFIYCKPEDAEAEHQ--KLLAWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCE 333
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETH 190
AW P +REL S SNC +Q+RRL +RY K A ATTR + AILE H
Sbjct: 334 AWVPTQNTYRELTSTSNCTTFQARRLSIRYRDESGKPQTAATLNGTLATTRWLVAILENH 393
Query: 191 QTETG-VRIPDCLRKFVPAVYLNEA 214
Q G VR+P+ L +FV L A
Sbjct: 394 QQADGSVRLPEELARFVGTEVLTPA 418
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ +++ +E A + + YRV+++ G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCKPEDAEAEH--QKLLAWEKEMLAAIDVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDESGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P+ L +FV
Sbjct: 380 LATTRWLVAILENHQQADGSVRLPEELARFV 410
Score = 46.6 bits (109), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 516 EVIGKGEKVGDSAPEK---DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 572
EV+G +G A E D+ DD YL+ TSE P+ H + L + P RY G STCF
Sbjct: 197 EVMGGTGFLGAHADEVYHLDKEDDLYLVGTSEVPLAGYHMNEILDLSDGPKRYAGWSTCF 256
Query: 573 RQEC 576
R+E
Sbjct: 257 RREA 260
>gi|422479060|ref|ZP_16555471.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA1]
gi|313826917|gb|EFS64631.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA1]
Length = 424
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ E+F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEEDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ E+F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEEDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|118467339|ref|YP_879487.1| seryl-tRNA synthetase [Mycobacterium avium 104]
gi|254773252|ref|ZP_05214768.1| seryl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
gi|166222745|sp|A0Q999.1|SYS_MYCA1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118168626|gb|ABK69523.1| seryl-tRNA synthetase [Mycobacterium avium 104]
Length = 425
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 122/208 (58%), Gaps = 11/208 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L ++ P+RY G S+CFR+E GS+G+DTRG+ RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHADEILDLSAGPLRYAGWSSCFRREAGSYGKDTRGVIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E+ ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCTPADAEAEHQ--RLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYAT---ACATTRVICAILE 188
W P +REL S SNC +Q+RRL RY + K +I AT TTR + AILE
Sbjct: 335 WVPTQQTYRELTSTSNCTTFQARRLSTRYRDGGDAKGKPQIAATLNGTLGTTRWLVAILE 394
Query: 189 THQTETG-VRIPDCLRKFVPAVYLNEAG 215
HQ G VR+P+ L FV L G
Sbjct: 395 NHQRPDGSVRVPEALVPFVGTELLEPVG 422
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 4/151 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ RVHQF+KVE FV +P D E+ ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGVIRVHQFDKVEGFVYCTPADAEAEH--QRLLGWQREMLARIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLSTRYRDGGDAKGKPQIAATLNGT- 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
TTR + AILE HQ G VR+P+ L FV
Sbjct: 383 LGTTRWLVAILENHQRPDGSVRVPEALVPFV 413
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L ++ P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHADEILDLSAGPLRYAGWSSCFRREA 260
>gi|15826923|ref|NP_301186.1| seryl-tRNA synthetase [Mycobacterium leprae TN]
gi|221229401|ref|YP_002502817.1| seryl-tRNA synthetase [Mycobacterium leprae Br4923]
gi|18202779|sp|Q9CDC1.1|SYS_MYCLE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|254783039|sp|B8ZTU5.1|SYS_MYCLB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|13092470|emb|CAC29590.1| putative seryl-tRNA synthase [Mycobacterium leprae]
gi|219932508|emb|CAR70175.1| putative seryl-tRNA synthase [Mycobacterium leprae Br4923]
Length = 417
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 121/205 (59%), Gaps = 8/205 (3%)
Query: 8 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDT 67
+G A E +DD YL+ TSE P+ H D L + P+RY G S+CFR+E GSHG+DT
Sbjct: 206 LGAHAEEVYRVDDLYLVGTSEVPMAGYHSDEILDLSVGPLRYAGWSSCFRREAGSHGKDT 265
Query: 68 RGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHA 127
RGI RVHQF+KVE FV +P D E ++ E A + + YRV+++ +G L +
Sbjct: 266 RGIIRVHQFDKVEGFVYCAPTDAEVEHQ--RLLGWQREMLARIEVPYRVIDVAAGDLGSS 323
Query: 128 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRV 182
AA+K D EAW P G++ EL S SNC +Q+RRL RY K +I AT TTR
Sbjct: 324 AARKFDCEAWVPTQGSYCELTSTSNCTTFQARRLATRYRDASGKPQIVATLNGTLGTTRW 383
Query: 183 ICAILETHQTETG-VRIPDCLRKFV 206
+ AILE HQ G VR+P L FV
Sbjct: 384 LVAILENHQRPDGSVRVPPALVPFV 408
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E ++ E A + + YRV+++ +G L
Sbjct: 264 DTRGIIRVHQFDKVEGFVYCAPTDAEVEH--QRLLGWQREMLARIEVPYRVIDVAAGDLG 321
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G++ EL S SNC +Q+RRL RY + + K + V LN T
Sbjct: 322 SSAARKFDCEAWVPTQGSYCELTSTSNCTTFQARRLATRY---RDASGKPQIVATLNGT- 377
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
TTR + AILE HQ G VR+P L FV
Sbjct: 378 LGTTRWLVAILENHQRPDGSVRVPPALVPFV 408
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 516 EVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
EV+ +G A E +DD YL+ TSE P+ H D L + P+RY G S+CFR+E
Sbjct: 198 EVMSGTGFLGAHAEEVYRVDDLYLVGTSEVPMAGYHSDEILDLSVGPLRYAGWSSCFRRE 257
Query: 576 C 576
Sbjct: 258 A 258
>gi|422499745|ref|ZP_16576003.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA2]
gi|313829289|gb|EFS67003.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA2]
Length = 424
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I+++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQISFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TRVI +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRVIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I+++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQISFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TRVI +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRVIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.8 bits (112), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|254393739|ref|ZP_05008859.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294813672|ref|ZP_06772315.1| Seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|326441924|ref|ZP_08216658.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197707346|gb|EDY53158.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294326271|gb|EFG07914.1| Seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 425
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S C+R+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADQLPLRYAGFSPCYRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D E+ +++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVMPEDAEAEH--KRLLEWEKQWLTSLELPFQVIDVATGDLGASASRKYDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR + K+ + T CA R I A+LE HQ
Sbjct: 339 WIPTQGKYRELTSASNCDSFQARRLSVRMREGKKVQPLATLNGTLCAVPRTIVALLENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P LR ++
Sbjct: 399 LADGSVRVPPVLRPYL 414
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D E+ +++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVMPEDAEAEHK--RLLEWEKQWLTSLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC ++Q+RRL VR + K K++ + LN T
Sbjct: 328 ASASRKYDCEAWIPTQGKYRELTSASNCDSFQARRLSVRMREGK----KVQPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I A+LE HQ G VR+P LR ++
Sbjct: 384 CAVPRTIVALLENHQLADGSVRVPPVLRPYL 414
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S C+R+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIIDADQLPLRYAGFSPCYRREA 264
>gi|377570232|ref|ZP_09799377.1| seryl-tRNA synthetase [Gordonia terrae NBRC 100016]
gi|377532506|dbj|GAB44542.1| seryl-tRNA synthetase [Gordonia terrae NBRC 100016]
Length = 419
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 119/198 (60%), Gaps = 10/198 (5%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 276
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE FV P D E+ ++ ++ A + + YRV+++ G L +A++K D E
Sbjct: 277 FDKVEGFVYCRPEDAEAEHQ--RLLGWEKDMLAAIDVPYRVIDVAGGDLGSSASRKYDCE 334
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILET 189
AW P G +REL S SNC +Q+RRL +RY QT + T ATTR + AILE
Sbjct: 335 AWVPTQGTYRELTSTSNCTTFQARRLSIRYRDENGRPQTAATLNGT-LATTRWLVAILEN 393
Query: 190 HQTETG-VRIPDCLRKFV 206
HQ G VR+P L KFV
Sbjct: 394 HQQPDGSVRLPAELAKFV 411
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ ++ ++ A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEGFVYCRPEDAEAEHQ--RLLGWEKDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL +RY + N + + LN T
Sbjct: 325 SSASRKYDCEAWVPTQGTYRELTSTSNCTTFQARRLSIRY---RDENGRPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L KFV
Sbjct: 381 LATTRWLVAILENHQQPDGSVRLPAELAKFV 411
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREA 261
>gi|406983815|gb|EKE04973.1| hypothetical protein ACD_19C00427G0020 [uncultured bacterium]
Length = 411
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LIAT+E + H D +PE++LP++Y+G S CFRQE GS+G+ +RG++RVHQF K E F
Sbjct: 215 LIATAEVTLAGSHADEVIPESALPLKYIGYSHCFRQEGGSYGKYSRGLYRVHQFTKAEMF 274
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
+ P D S D +++ E+ Y LGI YR++ +G L AA+K D+EAW PG
Sbjct: 275 IYCKPED--SLGFHDYLLEMEEKIYQGLGIPYRILKQCTGDLGAMAARKFDVEAWMPGRN 332
Query: 143 AFRELVSCSNCLDYQSRRLLVRY----GQTK--QKIYATACATTRVICAILETHQTETG- 195
+ E+ S SNC DYQ+R L ++Y G+T+ + +A AT+R I AILE Q E G
Sbjct: 333 DYGEITSTSNCTDYQARNLNIKYKKKNGETEYIHMLNGSAIATSRTIIAILENFQNEDGS 392
Query: 196 VRIPDCLRKFV 206
V IP L+K++
Sbjct: 393 VNIPTVLQKWM 403
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 93/150 (62%), Gaps = 6/150 (4%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
+RG++RVHQF K E F+ P D + D +++ E+ Y LGI YR++ +G L
Sbjct: 259 SRGLYRVHQFTKAEMFIYCKPEDSLGFH--DYLLEMEEKIYQGLGIPYRILKQCTGDLGA 316
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 423
AA+K D+EAW PG + E+ S SNC YQ+R L ++Y KK N + E++HMLN +A
Sbjct: 317 MAARKFDVEAWMPGRNDYGEITSTSNCTDYQARNLNIKY---KKKNGETEYIHMLNGSAI 373
Query: 424 ATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT+R I AILE Q E G V IP L+K++
Sbjct: 374 ATSRTIIAILENFQNEDGSVNIPTVLQKWM 403
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 539 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
LIAT+E + H D +PE++LP++Y+G S CFRQE
Sbjct: 215 LIATAEVTLAGSHADEVIPESALPLKYIGYSHCFRQE 251
>gi|118620021|ref|YP_908353.1| seryl-tRNA synthetase [Mycobacterium ulcerans Agy99]
gi|166222751|sp|A0PX13.1|SYS_MYCUA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118572131|gb|ABL06882.1| seryl-tRNA synthetase SerS [Mycobacterium ulcerans Agy99]
Length = 419
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 119/205 (58%), Gaps = 8/205 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D + + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E+ ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCAPADAEAEHQ--RLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K +I AT TTR + +ILE HQ
Sbjct: 335 WVPTQGTYRELTSTSNCTTFQARRLATRYRDANGKPQIAATLNGTLGTTRWLVSILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAG 215
G R+P L FV L G
Sbjct: 395 QPDGSARVPAALVGFVGTEVLEPKG 419
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV +P D E+ ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCAPADAEAEH--QRLLAWQREMLAQIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 ASAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLATRY---RDANGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
TTR + +ILE HQ G R+P L FV
Sbjct: 380 LGTTRWLVSILENHQQPDGSARVPAALVGFV 410
Score = 46.2 bits (108), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D + + P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREA 260
>gi|326329349|ref|ZP_08195674.1| serine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
gi|325952924|gb|EGD44939.1| serine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
Length = 423
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 123/203 (60%), Gaps = 8/203 (3%)
Query: 10 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRG 69
D K E DD YL+ TSE P+ A H D L +LP RY S+CFR+E GS G+DT+G
Sbjct: 213 DDGVYKIEDDDLYLVGTSEVPMAAYHADEILDPETLPRRYAAFSSCFRKEAGSAGKDTKG 272
Query: 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
I RVHQFEKVE FV T+ +ES+ +++ + F L +AY+V+++ +G L +A
Sbjct: 273 IIRVHQFEKVEMFVYTTV--EESYAEHQRLLEWEKAFLDKLELAYQVIDVAAGDLGPSAL 330
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTK-QKIYATACATTRVIC 184
+K D EAW P G +REL S SNC +Q+RRL +R G T + T A TR I
Sbjct: 331 RKFDCEAWIPTQGKYRELTSASNCTTFQARRLDIRQRTESGTTPVATLNGTLTAITRAIV 390
Query: 185 AILETHQTETG-VRIPDCLRKFV 206
A+LETHQ G VR+P L+K++
Sbjct: 391 AVLETHQQADGSVRVPKALQKWL 413
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 7/154 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GI RVHQFEKVE FV T+ +ES+ +++ + F L +AY+V+++ +G
Sbjct: 266 AGKDTKGIIRVHQFEKVEMFVYTTV--EESYAEHQRLLEWEKAFLDKLELAYQVIDVAAG 323
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +A +K D EAW P G +REL S SNC +Q+RRL +R ++ V LN
Sbjct: 324 DLGPSALRKFDCEAWIPTQGKYRELTSASNCTTFQARRLDIR----QRTESGTTPVATLN 379
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
T A TR I A+LETHQ G VR+P L+K++
Sbjct: 380 GTLTAITRAIVAVLETHQQADGSVRVPKALQKWL 413
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 526 DSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D K E DD YL+ TSE P+ A H D L +LP RY S+CFR+E
Sbjct: 213 DDGVYKIEDDDLYLVGTSEVPMAAYHADEILDPETLPRRYAAFSSCFRKEA 263
>gi|365966081|ref|YP_004947646.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn17]
gi|422449791|ref|ZP_16526512.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA2]
gi|315110490|gb|EFT82466.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA2]
gi|365742762|gb|AEW82456.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn17]
Length = 424
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I+++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQISFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I+++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQISFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.8 bits (112), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|406926507|gb|EKD62714.1| hypothetical protein ACD_52C00082G0001 [uncultured bacterium]
Length = 423
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YL+ T+E I +HRD + + LP RY+ S+CFR+E GS+G+DTRGIFRVHQF+KVE
Sbjct: 227 YLVGTAEHSIVPMHRDEVIRASELPKRYVAFSSCFRREAGSYGKDTRGIFRVHQFDKVEM 286
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
+T P +ES K + ++ E+ + L ++Y+VV + SG L AAKK DLE WFP
Sbjct: 287 VSITKP--EESDKEHEYLLSLEEKLFQALELSYQVVKMCSGDLGAPAAKKYDLEIWFPSQ 344
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-----ATACATTRVICAILETHQTETG- 195
+REL S SN D+Q+RRL ++Y K Y TA A R I A+LE +Q + G
Sbjct: 345 NKYRELTSTSNTTDFQARRLNIKYNDGKATKYVHMLNGTAFAIGRTIAAVLENYQLKDGS 404
Query: 196 VRIPDCLRKFV 206
V++P L+ ++
Sbjct: 405 VKVPQILQSYL 415
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE +T P +ES K + ++ E+ + L ++Y+VV + SG L
Sbjct: 271 DTRGIFRVHQFDKVEMVSITKP--EESDKEHEYLLSLEEKLFQALELSYQVVKMCSGDLG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE WFP +REL S SN +Q+RRL ++Y K +VHMLN TA
Sbjct: 329 APAAKKYDLEIWFPSQNKYRELTSTSNTTDFQARRLNIKYNDGKATK----YVHMLNGTA 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R I A+LE +Q + G V++P L+ ++
Sbjct: 385 FAIGRTIAAVLENYQLKDGSVKVPQILQSYL 415
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA--GMCRTYFHVTCAQREGL 595
YL+ T+E I +HRD + + LP RY+ S+CFR+E + R F V + +
Sbjct: 227 YLVGTAEHSIVPMHRDEVIRASELPKRYVAFSSCFRREAGSYGKDTRGIFRVHQFDKVEM 286
Query: 596 LSEATSEEVDQ 606
+S EE D+
Sbjct: 287 VSITKPEESDK 297
>gi|227505705|ref|ZP_03935754.1| seryl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
gi|227197673|gb|EEI77721.1| seryl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
Length = 418
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 117/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H+D L + P++Y G S+CFR+E GSHG+DTRGI RVHQF+K
Sbjct: 219 DDLYLVGTSEVALAGYHKDEILDLSDGPLKYTGWSSCFRREAGSHGKDTRGILRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E FV P +E+ +M +++ ++ A + + YR ++I G L +AA+K D EAW
Sbjct: 279 LEMFVFCKP--EEAEEMHQMLLKMEKDMLAAMELPYRTIDIAGGDLGSSAARKFDNEAWV 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P G +REL S SNC +Q+RRL RY K A ATTR + AILE HQ
Sbjct: 337 PTQGCYRELTSTSNCTTFQARRLQTRYRDENGKTQYAATLNGTLATTRWLVAILENHQQA 396
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 397 DGSVVVPEALRPFV 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P + E + +++ ++ A + + YR ++I G L
Sbjct: 266 DTRGILRVHQFDKLEMFVFCKPEEAEEMHQM--LLKMEKDMLAAMELPYRTIDIAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K ++ LN T
Sbjct: 324 SSAARKFDNEAWVPTQGCYRELTSTSNCTTFQARRLQTRY---RDENGKTQYAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENHQQADGSVVVPEALRPFV 410
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H+D L + P++Y G S+CFR+E
Sbjct: 219 DDLYLVGTSEVALAGYHKDEILDLSDGPLKYTGWSSCFRREA 260
>gi|336120748|ref|YP_004575534.1| seryl-tRNA synthetase [Microlunatus phosphovorus NM-1]
gi|334688546|dbj|BAK38131.1| seryl-tRNA synthetase [Microlunatus phosphovorus NM-1]
Length = 423
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 118/195 (60%), Gaps = 10/195 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ T+E P+ A H D LP SLP RY+G S CFR+E G+HG+DTRGIFRVH F+K
Sbjct: 223 DDLYLVGTAEVPLAAYHSDEILPAESLPRRYVGYSPCFRREAGAHGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV +P D E+ ++ ++F L I YRV+++ +G L +AA+K D E W
Sbjct: 283 VEMFVFCAPEDAEAEHA--RLLSWEKQFIDALEIPYRVIDVAAGDLGLSAARKFDCEGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI------YATACATTRVICAILETHQT 192
P +RE+ S SNC +Q+RRL +R G+ + T CA R+I +LE HQ
Sbjct: 341 PTQQRYREITSTSNCTQFQARRLNIR-GRFAGGVGPVATLNGTLCAMPRMIIMLLENHQQ 399
Query: 193 ETG-VRIPDCLRKFV 206
G VR+P L+ F+
Sbjct: 400 ADGSVRVPAALQPFL 414
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV +P D E+ ++ ++F L I YRV+++ +G L
Sbjct: 270 DTRGIFRVHWFDKVEMFVFCAPEDAEAEHA--RLLSWEKQFIDALEIPYRVIDVAAGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D E W P +RE+ S SNC +Q+RRL +R + + V LN T
Sbjct: 328 LSAARKFDCEGWLPTQQRYREITSTSNCTQFQARRLNIR----GRFAGGVGPVATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R+I +LE HQ G VR+P L+ F+
Sbjct: 384 CAMPRMIIMLLENHQQADGSVRVPAALQPFL 414
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DD YL+ T+E P+ A H D LP SLP RY+G S CFR+E A
Sbjct: 223 DDLYLVGTAEVPLAAYHSDEILPAESLPRRYVGYSPCFRREAGA 266
>gi|378715930|ref|YP_005280819.1| seryl-tRNA synthetase SerS [Gordonia polyisoprenivorans VH2]
gi|375750633|gb|AFA71453.1| seryl-tRNA synthetase SerS [Gordonia polyisoprenivorans VH2]
Length = 418
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 118/197 (59%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H + L + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 216 DKDDDLYLVGTSEVPLAGYHMNEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 275
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE F+ P D E+ +++ +E A + + YRV+++ G L +AA+K D E
Sbjct: 276 FDKVEGFIYCKPEDAEAEHQ--KLLAWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCE 333
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETH 190
AW P +REL S SNC +Q+RRL +RY K A ATTR + AILE H
Sbjct: 334 AWVPTQNTYRELTSTSNCTTFQARRLSIRYRDESGKPQTAATLNGTLATTRWLVAILENH 393
Query: 191 QTETG-VRIPDCLRKFV 206
Q G VR+P+ L +FV
Sbjct: 394 QQPDGSVRLPEELARFV 410
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ +++ +E A + + YRV+++ G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCKPEDAEAEH--QKLLAWEKEMLAAIDVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDESGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P+ L +FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVRLPEELARFV 410
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 516 EVIGKGEKVGDSAPEK---DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 572
EV+G +G A E D+ DD YL+ TSE P+ H + L + P RY G STCF
Sbjct: 197 EVMGGTGFLGAHADEVYHLDKDDDLYLVGTSEVPLAGYHMNEILDLSDGPKRYAGWSTCF 256
Query: 573 RQEC 576
R+E
Sbjct: 257 RREA 260
>gi|452992032|emb|CCQ96575.1| Serine--tRNA ligase [Clostridium ultunense Esp]
Length = 420
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 122/197 (61%), Gaps = 7/197 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E +DKYL+ T+E + + H L E LP RY GVS CFR+EVGS GRD G++RVHQF
Sbjct: 218 EKEDKYLVGTAEVSLASYHYGEILTEGELPKRYAGVSDCFRREVGSAGRDVFGLYRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVEQ ++ ++ES ++ E++QN+EE L + YRVV + +G + +K D+E
Sbjct: 278 SKVEQVIICRNDEEESKRLHYELLQNAEEILQGLELPYRVVQVCTGDMGQGQIRKHDIET 337
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKIYATACATTRVICAILETH 190
W P G + E SCS D+Q+RRL +RY G+ K + TA A+ R++ +LE H
Sbjct: 338 WMPSRGNYGETHSCSTFHDFQARRLKLRYREDNGELKYCHTLNNTAIASPRILIPLLENH 397
Query: 191 QTETG-VRIPDCLRKFV 206
QTE G +RIP+ L+ ++
Sbjct: 398 QTEDGRIRIPEALQPYM 414
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 4/159 (2%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D G++RVHQF KVEQ ++ ++ES + E++QN+EE L + YRVV + +G
Sbjct: 264 AGRDVFGLYRVHQFSKVEQVIICRNDEEESKRLHYELLQNAEEILQGLELPYRVVQVCTG 323
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+ +K D+E W P G + E SCS +Q+RRL +RY ++ N ++++ H LN
Sbjct: 324 DMGQGQIRKHDIETWMPSRGNYGETHSCSTFHDFQARRLKLRY---REDNGELKYCHTLN 380
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
TA A+ R++ +LE HQTE G +RIP+ L+ ++ ++
Sbjct: 381 NTAIASPRILIPLLENHQTEDGRIRIPEALQPYMGKEFI 419
Score = 47.8 bits (112), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E +DKYL+ T+E + + H L E LP RY GVS CFR+E +
Sbjct: 218 EKEDKYLVGTAEVSLASYHYGEILTEGELPKRYAGVSDCFRREVGS 263
>gi|375093083|ref|ZP_09739348.1| seryl-tRNA synthetase [Saccharomonospora marina XMU15]
gi|374653816|gb|EHR48649.1| seryl-tRNA synthetase [Saccharomonospora marina XMU15]
Length = 422
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YL+ TSE P+ H D L ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 EDLYLVGTSEVPLAGYHADEILELSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + ++ + ++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 280 VEMFVFCRPQEAQAEH--ERLLGWEEEMLAKIEVPYRVIDTAAGDLGSSAARKYDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S S+C YQ+RRL VRY + +I AT ATTR + AILE HQ
Sbjct: 338 PSQQTYRELTSTSDCTTYQARRLSVRYRDDDGRPQIAATLNGTLATTRWLVAILENHQQP 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ +R F+
Sbjct: 398 DGSVRVPEAMRPFL 411
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P E+ + ++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVFCRPQ--EAQAEHERLLGWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S S+C YQ+RRL VRY + + + + LN T
Sbjct: 325 SSAARKYDCEAWVPSQQTYRELTSTSDCTTYQARRLSVRY---RDDDGRPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P+ +R F+
Sbjct: 381 LATTRWLVAILENHQQPDGSVRVPEAMRPFL 411
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
+D YL+ TSE P+ H D L ++ P+RY G S+CFR+E
Sbjct: 220 EDLYLVGTSEVPLAGYHADEILELSAGPLRYAGWSSCFRREA 261
>gi|440775577|ref|ZP_20954443.1| seryl-tRNA ligase [Mycobacterium avium subsp. paratuberculosis S5]
gi|436724387|gb|ELP48097.1| seryl-tRNA ligase [Mycobacterium avium subsp. paratuberculosis S5]
Length = 306
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 122/208 (58%), Gaps = 11/208 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L ++ P+RY G S+CFR+E GS+G+DTRG+ RVHQF
Sbjct: 98 EADDLYLVGTSEVPLAGYHADEILDLSAGPLRYAGWSSCFRREAGSYGKDTRGVIRVHQF 157
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV +P D E+ ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 158 DKVEGFVYCTPADAEAEH--QRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEA 215
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYAT---ACATTRVICAILE 188
W P +REL S SNC +Q+RRL RY + K +I AT TTR + AILE
Sbjct: 216 WVPTQQTYRELTSTSNCTTFQARRLSTRYRDGGDAKGKPQIAATLNGTLGTTRWLVAILE 275
Query: 189 THQTETG-VRIPDCLRKFVPAVYLNEAG 215
HQ G VR+P+ L FV L G
Sbjct: 276 NHQQPDGSVRVPEALVPFVGTELLEPVG 303
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 4/151 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ RVHQF+KVE FV +P D E+ ++ E A + + YRV+++ +G L
Sbjct: 147 DTRGVIRVHQFDKVEGFVYCTPADAEAEH--QRLLGWQREMLARIEVPYRVIDVAAGDLG 204
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY K + LN T
Sbjct: 205 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLSTRYRDGGDAKGKPQIAATLNGT- 263
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
TTR + AILE HQ G VR+P+ L FV
Sbjct: 264 LGTTRWLVAILENHQQPDGSVRVPEALVPFV 294
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD YL+ TSE P+ H D L ++ P+RY G S+CFR+E +
Sbjct: 98 EADDLYLVGTSEVPLAGYHADEILDLSAGPLRYAGWSSCFRREAGS 143
>gi|403509363|ref|YP_006641001.1| serine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
gi|402800555|gb|AFR07965.1| serine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
Length = 427
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H LP S+P RY+G S+CFR+E GS+G+DTRGI RVHQF K
Sbjct: 220 DDLYLVGTSEVALAGYHGGEILPGESMPRRYIGWSSCFRREAGSYGKDTRGIIRVHQFNK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV T H D++ + + ++ L + YRVV+I G L +AA+K D EAW
Sbjct: 280 VEMFVYT--HPDQAHEEHERLLAWERRMLDKLDLPYRVVDIAGGDLGTSAARKYDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC ++Q+RRL VRY K + AT ATTR I AILE HQ E
Sbjct: 338 PTQETYRELTSTSNCTEFQARRLNVRYRDEDGKPRFAATLNGTLATTRWIVAILENHQRE 397
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR ++
Sbjct: 398 DGSVVVPEALRPYL 411
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE FV T H D++ + + ++ L + YRVV+I G L
Sbjct: 267 DTRGIIRVHQFNKVEMFVYT--HPDQAHEEHERLLAWERRMLDKLDLPYRVVDIAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + + K F LN T
Sbjct: 325 TSAARKYDCEAWVPTQETYRELTSTSNCTEFQARRLNVRY---RDEDGKPRFAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ E G V +P+ LR ++
Sbjct: 381 LATTRWIVAILENHQREDGSVVVPEALRPYL 411
Score = 47.0 bits (110), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H LP S+P RY+G S+CFR+E
Sbjct: 220 DDLYLVGTSEVALAGYHGGEILPGESMPRRYIGWSSCFRREA 261
>gi|384083437|ref|ZP_09994612.1| seryl-tRNA synthetase [gamma proteobacterium HIMB30]
Length = 431
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 9/204 (4%)
Query: 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIF 71
APE ++YLI T+E P+ + RDS + +SLP++Y+ + CFR E GS+GRD RG+F
Sbjct: 223 APEDGGGRERYLIPTAEVPLTNLVRDSIVDASSLPLQYVAHTPCFRAEAGSYGRDVRGMF 282
Query: 72 RVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKK 131
R HQF+KVE +T P ++SW+ L+ + ++E L + YRVV++ G L +AAK
Sbjct: 283 RQHQFDKVELVWITHP--EKSWEALEALRAHAEAVLKGLDLHYRVVDLCGGDLGFSAAKT 340
Query: 132 LDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICA 185
DLE W PG FRE+ SCSNCLD+QSRR+ R+ K + + A R + A
Sbjct: 341 YDLEVWLPGQDQFREISSCSNCLDFQSRRMQARFRNDNGKPELVHTLNGSGVAIGRCLIA 400
Query: 186 ILETHQTETG-VRIPDCLRKFVPA 208
++E +Q E G + +P+ L+ ++ A
Sbjct: 401 VIENYQNEDGSITVPEALKPYIKA 424
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 94/153 (61%), Gaps = 6/153 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RG+FR HQF+KVE +T P ++SW+ L+ + ++E L + YRVV++ G L
Sbjct: 277 DVRGMFRQHQFDKVELVWITHP--EKSWEALEALRAHAEAVLKGLDLHYRVVDLCGGDLG 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK DLE W PG FRE+ SCSNCL +QSRR+ R+ + N K E VH LN +
Sbjct: 335 FSAAKTYDLEVWLPGQDQFREISSCSNCLDFQSRRMQARF---RNDNGKPELVHTLNGSG 391
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
A R + A++E +Q E G + +P+ L+ ++ A
Sbjct: 392 VAIGRCLIAVIENYQNEDGSITVPEALKPYIKA 424
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 528 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMC 581
APE ++YLI T+E P+ + RDS + +SLP++Y+ + CFR E + GM
Sbjct: 223 APEDGGGRERYLIPTAEVPLTNLVRDSIVDASSLPLQYVAHTPCFRAEAGSYGRDVRGMF 282
Query: 582 RTY 584
R +
Sbjct: 283 RQH 285
>gi|111021024|ref|YP_703996.1| seryl-tRNA synthetase [Rhodococcus jostii RHA1]
gi|397734107|ref|ZP_10500817.1| seryl-tRNA synthetase [Rhodococcus sp. JVH1]
gi|122955575|sp|Q0S9E8.1|SYS_RHOSR RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|110820554|gb|ABG95838.1| serine--tRNA ligase [Rhodococcus jostii RHA1]
gi|396929775|gb|EJI96974.1| seryl-tRNA synthetase [Rhodococcus sp. JVH1]
Length = 418
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 112/194 (57%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L A P RY G STCFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D ++ ++ E A + + YRV+++ G L +AA+K D EAW
Sbjct: 280 VEMFTYCKPEDADAEHQ--RLLAWEREMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL VRY K A ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTFQARRLGVRYRDENGKPQTAATLNGTLATTRWIVAILENHQQS 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ L FV
Sbjct: 398 DGTVRVPEALVPFV 411
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ ++ E A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFTYCKPEDADAEHQ--RLLAWEREMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQQAYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P+ L FV
Sbjct: 381 LATTRWIVAILENHQQSDGTVRVPEALVPFV 411
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H L A P RY G STCFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREA 261
>gi|404421062|ref|ZP_11002789.1| seryl-tRNA ligase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403659414|gb|EJZ14063.1| seryl-tRNA ligase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 418
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H L + P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHSGEILDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E+ +++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCKPEDAEAEHQ--KLLGWQREMLAAIEVPYRVIDVAAGDLGSSAARKYDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WVPTQQTYRELTSTSNCTTFQARRLATRYRDENGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VRIPD L FV
Sbjct: 395 QPDGTVRIPDALVPFV 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ +++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCKPEDAEAEH--QKLLGWQREMLAAIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKYDCEAWVPTQQTYRELTSTSNCTTFQARRLATRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VRIPD L FV
Sbjct: 380 LATTRWLVAILENHQQPDGTVRIPDALVPFV 410
Score = 43.5 bits (101), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H L + P RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHSGEILDLSDGPKRYAGWSSCFRREA 260
>gi|261872052|gb|ACY02860.1| seryl-tRNA synthetase 1 [Streptomyces sp. ATCC 700974]
Length = 424
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 220 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 279
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D E+ +++ +++ L + ++V+++ + L +A++K D EA
Sbjct: 280 DKVEMFSYVDPADAEAEHR--RLLEWEKQWLTGLELPFQVIDVATADLGASASRKFDCEA 337
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VR K+ + T CA R I A+LE HQ
Sbjct: 338 WIPTQGKYRELTSASNCDGFQARRLSVRMRDGKKVQPLATLNGTLCAVPRTIVALLENHQ 397
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 398 LPDGSVRVPEVLRPYL 413
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D E+ +++ +++ L + ++V+++ + L
Sbjct: 269 DTRGIFRVHQFDKVEMFSYVDPADAEAEHR--RLLEWEKQWLTGLELPFQVIDVATADLG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K K++ + LN T
Sbjct: 327 ASASRKFDCEAWIPTQGKYRELTSASNCDGFQARRLSVRMRDGK----KVQPLATLNGTL 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I A+LE HQ G VR+P+ LR ++
Sbjct: 383 CAVPRTIVALLENHQLPDGSVRVPEVLRPYL 413
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 220 EKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREA 263
>gi|418418382|ref|ZP_12991568.1| seryl-tRNA synthetase [Mycobacterium abscessus subsp. bolletii BD]
gi|364002376|gb|EHM23567.1| seryl-tRNA synthetase [Mycobacterium abscessus subsp. bolletii BD]
Length = 418
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE PI H L S P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EEDDLYLVGTSEVPIAGYHSGEILDLNSGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E ++++ + + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEAFVYCKPEDAEVEH--EKILGWERQMLGHIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P A+REL S SNC +Q+RRL VRY K +I AT ATTR + AILE HQ
Sbjct: 335 WVPTQRAYRELTSTSNCTTFQARRLAVRYRDENGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 395 QPDGSVRVPTALVPFV 410
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E ++++ + + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEAFVYCKPEDAEVEH--EKILGWERQMLGHIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQRAYRELTSTSNCTTFQARRLAVRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPTALVPFV 410
Score = 46.6 bits (109), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 516 EVIGKGEKVGDSAPEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
E++G +G A E L DD YL+ TSE PI H L S P+RY G S+CFR
Sbjct: 198 EIMGGTGFLGAHADEVYHLEEDDLYLVGTSEVPIAGYHSGEILDLNSGPLRYAGWSSCFR 257
Query: 574 QEC 576
+E
Sbjct: 258 REA 260
>gi|282854499|ref|ZP_06263835.1| serine--tRNA ligase [Propionibacterium acnes J139]
gi|386070407|ref|YP_005985303.1| seryl-tRNA synthetase [Propionibacterium acnes ATCC 11828]
gi|422467043|ref|ZP_16543600.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA4]
gi|422470543|ref|ZP_16547063.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA3]
gi|422577215|ref|ZP_16652751.1| seryl-tRNA synthetase [Propionibacterium acnes HL001PA1]
gi|282582360|gb|EFB87741.1| serine--tRNA ligase [Propionibacterium acnes J139]
gi|314921979|gb|EFS85810.1| seryl-tRNA synthetase [Propionibacterium acnes HL001PA1]
gi|314980741|gb|EFT24835.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA3]
gi|315090940|gb|EFT62916.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA4]
gi|353454773|gb|AER05292.1| seryl-tRNA synthetase [Propionibacterium acnes ATCC 11828]
Length = 424
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.8 bits (112), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|335050297|ref|ZP_08543267.1| serine--tRNA ligase [Propionibacterium sp. 409-HC1]
gi|342211538|ref|ZP_08704263.1| serine--tRNA ligase [Propionibacterium sp. CC003-HC2]
gi|333769960|gb|EGL47039.1| serine--tRNA ligase [Propionibacterium sp. 409-HC1]
gi|340767082|gb|EGR89607.1| serine--tRNA ligase [Propionibacterium sp. CC003-HC2]
Length = 424
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|50843654|ref|YP_056881.1| seryl-tRNA synthetase [Propionibacterium acnes KPA171202]
gi|289425915|ref|ZP_06427667.1| serine--tRNA ligase [Propionibacterium acnes SK187]
gi|289427861|ref|ZP_06429565.1| serine--tRNA ligase [Propionibacterium acnes J165]
gi|295131740|ref|YP_003582403.1| serine--tRNA ligase [Propionibacterium acnes SK137]
gi|335055122|ref|ZP_08547912.1| serine--tRNA ligase [Propionibacterium sp. 434-HC2]
gi|354605760|ref|ZP_09023735.1| seryl-tRNA synthetase [Propionibacterium sp. 5_U_42AFAA]
gi|365963841|ref|YP_004945407.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365975020|ref|YP_004956579.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn33]
gi|386025144|ref|YP_005943450.1| serine-tRNA ligase [Propionibacterium acnes 266]
gi|387504578|ref|YP_005945807.1| seryl-tRNA synthetase [Propionibacterium acnes 6609]
gi|417930761|ref|ZP_12574135.1| serine--tRNA ligase [Propionibacterium acnes SK182]
gi|422383805|ref|ZP_16463946.1| serine--tRNA ligase [Propionibacterium acnes HL096PA3]
gi|422386636|ref|ZP_16466753.1| serine--tRNA ligase [Propionibacterium acnes HL096PA2]
gi|422391650|ref|ZP_16471730.1| serine--tRNA ligase [Propionibacterium acnes HL099PA1]
gi|422423817|ref|ZP_16500768.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA1]
gi|422426585|ref|ZP_16503505.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA1]
gi|422430412|ref|ZP_16507293.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA2]
gi|422434459|ref|ZP_16511317.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA2]
gi|422442985|ref|ZP_16519786.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA1]
gi|422445237|ref|ZP_16521990.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA1]
gi|422448146|ref|ZP_16524878.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA3]
gi|422452630|ref|ZP_16529327.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA3]
gi|422455646|ref|ZP_16532316.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA1]
gi|422461101|ref|ZP_16537735.1| seryl-tRNA synthetase [Propionibacterium acnes HL038PA1]
gi|422474381|ref|ZP_16550848.1| seryl-tRNA synthetase [Propionibacterium acnes HL056PA1]
gi|422476074|ref|ZP_16552513.1| seryl-tRNA synthetase [Propionibacterium acnes HL007PA1]
gi|422482190|ref|ZP_16558589.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA1]
gi|422484570|ref|ZP_16560947.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA2]
gi|422486464|ref|ZP_16562810.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA2]
gi|422496655|ref|ZP_16572937.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA3]
gi|422501821|ref|ZP_16578070.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA2]
gi|422505308|ref|ZP_16581539.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA2]
gi|422507557|ref|ZP_16583739.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA2]
gi|422512288|ref|ZP_16588421.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA2]
gi|422519258|ref|ZP_16595320.1| seryl-tRNA synthetase [Propionibacterium acnes HL074PA1]
gi|422520136|ref|ZP_16596178.1| seryl-tRNA synthetase [Propionibacterium acnes HL045PA1]
gi|422525214|ref|ZP_16601216.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA1]
gi|422527664|ref|ZP_16603651.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA1]
gi|422533363|ref|ZP_16609301.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA1]
gi|422536514|ref|ZP_16612421.1| seryl-tRNA synthetase [Propionibacterium acnes HL078PA1]
gi|422538977|ref|ZP_16614851.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA1]
gi|422541857|ref|ZP_16617713.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA1]
gi|422546775|ref|ZP_16622599.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA3]
gi|422548886|ref|ZP_16624694.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA1]
gi|422552806|ref|ZP_16628594.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA3]
gi|422556156|ref|ZP_16631915.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA2]
gi|422556644|ref|ZP_16632396.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA2]
gi|422558815|ref|ZP_16634548.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA1]
gi|422561534|ref|ZP_16637219.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA1]
gi|422567908|ref|ZP_16643533.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA2]
gi|422569184|ref|ZP_16644799.1| seryl-tRNA synthetase [Propionibacterium acnes HL067PA1]
gi|422577321|ref|ZP_16652855.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA4]
gi|81826360|sp|Q6A5P0.1|SYS_PROAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|50841256|gb|AAT83923.1| seryl-tRNA synthetase [Propionibacterium acnes KPA171202]
gi|289153691|gb|EFD02400.1| serine--tRNA ligase [Propionibacterium acnes SK187]
gi|289158744|gb|EFD06944.1| serine--tRNA ligase [Propionibacterium acnes J165]
gi|291377175|gb|ADE01030.1| serine--tRNA ligase [Propionibacterium acnes SK137]
gi|313765178|gb|EFS36542.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA1]
gi|313771554|gb|EFS37520.1| seryl-tRNA synthetase [Propionibacterium acnes HL074PA1]
gi|313808611|gb|EFS47071.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA2]
gi|313811953|gb|EFS49667.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA1]
gi|313819045|gb|EFS56759.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA2]
gi|313821678|gb|EFS59392.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA1]
gi|313823814|gb|EFS61528.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA2]
gi|313832385|gb|EFS70099.1| seryl-tRNA synthetase [Propionibacterium acnes HL007PA1]
gi|313834182|gb|EFS71896.1| seryl-tRNA synthetase [Propionibacterium acnes HL056PA1]
gi|314916818|gb|EFS80649.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA4]
gi|314918995|gb|EFS82826.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA1]
gi|314921174|gb|EFS85005.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA3]
gi|314926153|gb|EFS89984.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA3]
gi|314932479|gb|EFS96310.1| seryl-tRNA synthetase [Propionibacterium acnes HL067PA1]
gi|314956294|gb|EFT00666.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA1]
gi|314958685|gb|EFT02787.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA1]
gi|314960992|gb|EFT05093.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA2]
gi|314968817|gb|EFT12915.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA1]
gi|314975052|gb|EFT19147.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA1]
gi|314977463|gb|EFT21558.1| seryl-tRNA synthetase [Propionibacterium acnes HL045PA1]
gi|314979051|gb|EFT23145.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA2]
gi|314985840|gb|EFT29932.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA1]
gi|314985971|gb|EFT30063.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA2]
gi|314989277|gb|EFT33368.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA3]
gi|315081396|gb|EFT53372.1| seryl-tRNA synthetase [Propionibacterium acnes HL078PA1]
gi|315084964|gb|EFT56940.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA2]
gi|315087495|gb|EFT59471.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA3]
gi|315089597|gb|EFT61573.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA1]
gi|315096907|gb|EFT68883.1| seryl-tRNA synthetase [Propionibacterium acnes HL038PA1]
gi|315102807|gb|EFT74783.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA1]
gi|315107363|gb|EFT79339.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA1]
gi|327332982|gb|EGE74714.1| serine--tRNA ligase [Propionibacterium acnes HL096PA2]
gi|327333974|gb|EGE75689.1| serine--tRNA ligase [Propionibacterium acnes HL096PA3]
gi|327448690|gb|EGE95344.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA1]
gi|327449117|gb|EGE95771.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA2]
gi|327450347|gb|EGE97001.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA2]
gi|327455505|gb|EGF02160.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA3]
gi|327456161|gb|EGF02816.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA2]
gi|328756832|gb|EGF70448.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA1]
gi|328759113|gb|EGF72729.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA2]
gi|328762221|gb|EGF75717.1| serine--tRNA ligase [Propionibacterium acnes HL099PA1]
gi|332676603|gb|AEE73419.1| serine-tRNA ligase [Propionibacterium acnes 266]
gi|333762729|gb|EGL40215.1| serine--tRNA ligase [Propionibacterium sp. 434-HC2]
gi|335278623|gb|AEH30528.1| seryl-tRNA synthetase [Propionibacterium acnes 6609]
gi|340769666|gb|EGR92188.1| serine--tRNA ligase [Propionibacterium acnes SK182]
gi|353558416|gb|EHC27780.1| seryl-tRNA synthetase [Propionibacterium sp. 5_U_42AFAA]
gi|365740522|gb|AEW84724.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365745019|gb|AEW80216.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn33]
gi|456739291|gb|EMF63858.1| seryl-tRNA ligase [Propionibacterium acnes FZ1/2/0]
Length = 424
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|86604971|ref|YP_473734.1| seryl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
gi|123507911|sp|Q2JXL1.1|SYS_SYNJA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|86553513|gb|ABC98471.1| seryl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
Length = 435
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 130/214 (60%), Gaps = 13/214 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +LI T+E P+ ++R+ +P LP+ + + CFR+E GS+GRDT+G+ R+HQF+K
Sbjct: 227 DDLWLIPTAEVPLTNLYREEVIPAERLPLYFCAYTPCFRREAGSYGRDTKGLIRLHQFQK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P E+ ++++Q++E L + YRVV + +G L +AA+ DLE WF
Sbjct: 287 VELVKVTHPTQSEAEH--EKLVQDAEAILQMLELPYRVVELCTGDLGFSAARCFDLEVWF 344
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQ 191
P +RE+ SCSNC D+Q+RR +RY + QK + + A R + A+LE HQ
Sbjct: 345 PSQNRYREISSCSNCWDFQARRANLRYKEAGQKGTHFVHTLNGSGLAVGRALAALLENHQ 404
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
G +RIP LR F+ + +L+E G + +TAP
Sbjct: 405 QPDGSIRIPQALRPFLSSRFLSEDGAL---RTAP 435
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 102/169 (60%), Gaps = 8/169 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G+ R+HQF+KVE +T P E+ ++++Q++E L + YRVV + +G L
Sbjct: 274 DTKGLIRLHQFQKVELVKVTHPTQSEAEH--EKLVQDAEAILQMLELPYRVVELCTGDLG 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+ DLE WFP +RE+ SCSNC +Q+RR +RY + + + FVH LN +
Sbjct: 332 FSAARCFDLEVWFPSQNRYREISSCSNCWDFQARRANLRYKEAGQ--KGTHFVHTLNGSG 389
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
A R + A+LE HQ G +RIP LR F+ + +++E G + +TAP
Sbjct: 390 LAVGRALAALLENHQQPDGSIRIPQALRPFLSSRFLSEDGAL---RTAP 435
>gi|422489715|ref|ZP_16566042.1| seryl-tRNA synthetase [Propionibacterium acnes HL020PA1]
gi|328757719|gb|EGF71335.1| seryl-tRNA synthetase [Propionibacterium acnes HL020PA1]
Length = 424
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.8 bits (112), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|422457612|ref|ZP_16534270.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA2]
gi|315105281|gb|EFT77257.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA2]
Length = 424
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|422389266|ref|ZP_16469363.1| serine--tRNA ligase [Propionibacterium acnes HL103PA1]
gi|422462790|ref|ZP_16539410.1| seryl-tRNA synthetase [Propionibacterium acnes HL060PA1]
gi|422565531|ref|ZP_16641179.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA2]
gi|314965938|gb|EFT10037.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA2]
gi|315095165|gb|EFT67141.1| seryl-tRNA synthetase [Propionibacterium acnes HL060PA1]
gi|327328793|gb|EGE70553.1| serine--tRNA ligase [Propionibacterium acnes HL103PA1]
Length = 424
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|169627258|ref|YP_001700907.1| seryl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
gi|419711239|ref|ZP_14238703.1| seryl-tRNA synthetase [Mycobacterium abscessus M93]
gi|420861987|ref|ZP_15325383.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0303]
gi|420866572|ref|ZP_15329959.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0726-RA]
gi|420875873|ref|ZP_15339249.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0726-RB]
gi|420912788|ref|ZP_15376100.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0125-R]
gi|420913982|ref|ZP_15377291.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0125-S]
gi|420921065|ref|ZP_15384362.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0728-S]
gi|420924875|ref|ZP_15388167.1| serine--tRNA ligase [Mycobacterium abscessus 6G-1108]
gi|420964317|ref|ZP_15427539.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0810-R]
gi|420975220|ref|ZP_15438408.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0212]
gi|420980602|ref|ZP_15443775.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0728-R]
gi|420988618|ref|ZP_15451774.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0206]
gi|421005085|ref|ZP_15468205.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0119-R]
gi|421010626|ref|ZP_15473729.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0122-R]
gi|421021059|ref|ZP_15484115.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0122-S]
gi|421021127|ref|ZP_15484180.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0731]
gi|421026923|ref|ZP_15489963.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0930-R]
gi|421032139|ref|ZP_15495165.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0930-S]
gi|421037727|ref|ZP_15500739.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0116-R]
gi|421046222|ref|ZP_15509222.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0116-S]
gi|238688911|sp|B1MEI9.1|SYS_MYCA9 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|169239225|emb|CAM60253.1| seryl-tRNA synthetase (SerS) [Mycobacterium abscessus]
gi|382940129|gb|EIC64455.1| seryl-tRNA synthetase [Mycobacterium abscessus M93]
gi|392067348|gb|EIT93196.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0726-RB]
gi|392074903|gb|EIU00737.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0726-RA]
gi|392077148|gb|EIU02979.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0303]
gi|392114782|gb|EIU40551.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0125-R]
gi|392125476|gb|EIU51229.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0125-S]
gi|392130901|gb|EIU56647.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0728-S]
gi|392147283|gb|EIU73003.1| serine--tRNA ligase [Mycobacterium abscessus 6G-1108]
gi|392175346|gb|EIV01008.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0212]
gi|392176400|gb|EIV02058.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0728-R]
gi|392182897|gb|EIV08548.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0206]
gi|392206782|gb|EIV32365.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0122-S]
gi|392206899|gb|EIV32480.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0119-R]
gi|392216063|gb|EIV41609.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0122-R]
gi|392217970|gb|EIV43502.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0731]
gi|392229408|gb|EIV54919.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0116-R]
gi|392232672|gb|EIV58172.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0930-S]
gi|392235675|gb|EIV61173.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0116-S]
gi|392236841|gb|EIV62337.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0930-R]
gi|392258994|gb|EIV84435.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0810-R]
Length = 418
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE PI H L + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EEDDLYLVGTSEVPIAGYHSGEILDLNNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E+ ++++ + + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEAFVYCKPEDAEAEH--EKILGWERQMLGHIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P A+REL S SNC +Q+RRL VRY K +I AT ATTR + AILE HQ
Sbjct: 335 WVPTQRAYRELTSTSNCTTFQARRLAVRYRDESGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 395 QPDGSVRVPTALVPFV 410
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ ++++ + + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEAFVYCKPEDAEAEH--EKILGWERQMLGHIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + + K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQRAYRELTSTSNCTTFQARRLAVRY---RDESGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPTALVPFV 410
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 516 EVIGKGEKVGDSAPEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
E++G +G A E L DD YL+ TSE PI H L + P+RY G S+CFR
Sbjct: 198 EIMGGTGFLGAHADEVYHLEEDDLYLVGTSEVPIAGYHSGEILDLNNGPLRYAGWSSCFR 257
Query: 574 QEC 576
+E
Sbjct: 258 REA 260
>gi|326384326|ref|ZP_08206007.1| seryl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
gi|326196924|gb|EGD54117.1| seryl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
Length = 417
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 116/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H+D L ++ P RY G STCFR+E GS+G+DTRGI RVHQF+K
Sbjct: 218 DDLYLVGTSEVPLAGYHKDEILDLSNGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDK 277
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ P D E+ ++ ++ A + + YRV+++ G L +AA+K D EAW
Sbjct: 278 VEGFIYCKPEDAEAEHQ--RILGWEKDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWV 335
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P G +REL S SNC +Q+RRL VRY K A ATTR + AILE HQ
Sbjct: 336 PTQGTYRELTSTSNCTTFQARRLSVRYRDENGKPQTAATLNGTLATTRWLVAILENHQQP 395
Query: 194 TG-VRIPDCLRKFV 206
G V +P L +FV
Sbjct: 396 DGSVVLPPELARFV 409
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ ++ ++ A + + YRV+++ G L
Sbjct: 265 DTRGIIRVHQFDKVEGFIYCKPEDAEAEHQ--RILGWEKDMLAAIDVPYRVIDVAGGDLG 322
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 323 SSAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLSVRY---RDENGKPQTAATLNGT- 378
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P L +FV
Sbjct: 379 LATTRWLVAILENHQQPDGSVVLPPELARFV 409
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H+D L ++ P RY G STCFR+E
Sbjct: 218 DDLYLVGTSEVPLAGYHKDEILDLSNGPKRYAGWSTCFRREA 259
>gi|217967764|ref|YP_002353270.1| seryl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
gi|226701462|sp|B8E0R9.1|SYS_DICTD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|217336863|gb|ACK42656.1| seryl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
Length = 425
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D LIAT+E + H+D L E LP++YLG S CFR E G++GR RG++RVHQF K
Sbjct: 225 DLGLIATAEITLGGYHKDEILDELDLPLKYLGFSHCFRTEAGAYGRYNRGLYRVHQFSKA 284
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E F++ P D E +M + ++ E+ + L I YRV++I SG L AA+K D+EAW P
Sbjct: 285 EIFIICRPEDSE--EMHEYILGLEEKIFQKLEIPYRVLDICSGDLGAPAARKFDIEAWMP 342
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI------YATACATTRVICAILETHQTE 193
G G F E+ SCSNC DYQ+RRL +R+ + ++ TA A +R + AI E +Q E
Sbjct: 343 GRGEFGEVTSCSNCTDYQARRLNIRFRRVTGEVEYVHMLNGTAIAISRALIAIFENYQQE 402
Query: 194 TG-VRIPDCLRKFV 206
G + IP L+ ++
Sbjct: 403 DGSILIPKALQPYI 416
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 95/151 (62%), Gaps = 8/151 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEE-FYADLGIAYRVVNIVSGALN 362
RG++RVHQF K E F++ P D E + E I EE + L I YRV++I SG L
Sbjct: 272 NRGLYRVHQFSKAEIFIICRPEDSEE---MHEYILGLEEKIFQKLEIPYRVLDICSGDLG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+K D+EAW PG G F E+ SCSNC YQ+RRL +R+ +++ ++E+VHMLN TA
Sbjct: 329 APAARKFDIEAWMPGRGEFGEVTSCSNCTDYQARRLNIRF---RRVTGEVEYVHMLNGTA 385
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A +R + AI E +Q E G + IP L+ ++
Sbjct: 386 IAISRALIAIFENYQQEDGSILIPKALQPYI 416
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D LIAT+E + H+D L E LP++YLG S CFR E A
Sbjct: 225 DLGLIATAEITLGGYHKDEILDELDLPLKYLGFSHCFRTEAGA 267
>gi|419714079|ref|ZP_14241499.1| seryl-tRNA synthetase [Mycobacterium abscessus M94]
gi|382946018|gb|EIC70308.1| seryl-tRNA synthetase [Mycobacterium abscessus M94]
Length = 420
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE PI H L + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 219 EEDDLYLVGTSEVPIAGYHSGEILDLNNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 278
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E+ ++++ + + + YRV+++ +G L +AA+K D EA
Sbjct: 279 DKVEAFVYCKPEDAEAEH--EKILGWERQMLGHIEVPYRVIDVAAGDLGSSAARKFDCEA 336
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P A+REL S SNC +Q+RRL VRY K +I AT ATTR + AILE HQ
Sbjct: 337 WVPTQRAYRELTSTSNCTTFQARRLAVRYRDESGKPQIAATLNGTLATTRWLVAILENHQ 396
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 397 QPDGSVRVPTALVPFV 412
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ ++++ + + + YRV+++ +G L
Sbjct: 268 DTRGIIRVHQFDKVEAFVYCKPEDAEAEH--EKILGWERQMLGHIEVPYRVIDVAAGDLG 325
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + + K + LN T
Sbjct: 326 SSAARKFDCEAWVPTQRAYRELTSTSNCTTFQARRLAVRY---RDESGKPQIAATLNGT- 381
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 382 LATTRWLVAILENHQQPDGSVRVPTALVPFV 412
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 516 EVIGKGEKVGDSAPEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
E++G +G A E L DD YL+ TSE PI H L + P+RY G S+CFR
Sbjct: 200 EIMGGTGFLGAHADEVYHLEEDDLYLVGTSEVPIAGYHSGEILDLNNGPLRYAGWSSCFR 259
Query: 574 QEC 576
+E
Sbjct: 260 REA 262
>gi|50954101|ref|YP_061389.1| seryl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|81826708|sp|Q6AH61.1|SYS_LEIXX RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|50950583|gb|AAT88284.1| seryl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 421
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 120/203 (59%), Gaps = 9/203 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL TSE + H D L + + P+RY G STC+R+E GS G+DTRGI RVHQF
Sbjct: 218 ETDDLYLTGTSEVALAGYHADEIL-DVTEPLRYAGWSTCYRREAGSAGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
K+E FV T P E+ ++ EE LG++YRV++ +G L +AA+K D+EA
Sbjct: 277 TKLEMFVYTLPEHAEAEHA--RLLAWQEEMMQALGLSYRVIDTAAGDLGSSAARKYDVEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K A ATTR I AILETHQ
Sbjct: 335 WIPTQGRYRELTSTSNCGTFQARRLETRYRTESGKTAPVATLNGTLATTRWIVAILETHQ 394
Query: 192 TETG-VRIPDCLRKFVPAVYLNE 213
E G V +P+ LR ++ + + E
Sbjct: 395 REDGSVLVPETLRPYLGGLEILE 417
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 96/161 (59%), Gaps = 7/161 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI RVHQF K+E FV T P E+ ++ EE LG++YRV++ +G
Sbjct: 263 AGKDTRGIIRVHQFTKLEMFVYTLPEHAEAEHA--RLLAWQEEMMQALGLSYRVIDTAAG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AA+K D+EAW P G +REL S SNC +Q+RRL RY + + K V LN
Sbjct: 321 DLGSSAARKYDVEAWIPTQGRYRELTSTSNCGTFQARRLETRY---RTESGKTAPVATLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
T ATTR I AILETHQ E G V +P+ LR ++ + + E
Sbjct: 378 GT-LATTRWIVAILETHQREDGSVLVPETLRPYLGGLEILE 417
Score = 41.6 bits (96), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD YL TSE + H D L + + P+RY G STC+R+E +
Sbjct: 218 ETDDLYLTGTSEVALAGYHADEIL-DVTEPLRYAGWSTCYRREAGS 262
>gi|403728030|ref|ZP_10947908.1| serine--tRNA ligase [Gordonia rhizosphera NBRC 16068]
gi|403203673|dbj|GAB92239.1| serine--tRNA ligase [Gordonia rhizosphera NBRC 16068]
Length = 418
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L +S P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EEDDLYLVGTSEVPLAGYHSDEILDLSSGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F+ P D + +++ +E A + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKVEGFIYCKPEDAHTEHQ--KLLAWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL +RY K ++ AT ATTR + AILE HQ
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLSIRYRDESGKPQVAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V++P L +FV
Sbjct: 395 QPDGSVKLPPELARFV 410
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D + +++ +E A + + YRV+++ G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCKPEDAHTEH--QKLLAWEKEMLAAIDVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDESGKPQVAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V++P L +FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVKLPPELARFV 410
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD YL+ TSE P+ H D L +S P+RY G S+CFR+E +
Sbjct: 217 EEDDLYLVGTSEVPLAGYHSDEILDLSSGPLRYAGWSSCFRREAGS 262
>gi|404212807|ref|YP_006666982.1| Seryl-tRNA synthetase [Gordonia sp. KTR9]
gi|403643606|gb|AFR46846.1| Seryl-tRNA synthetase [Gordonia sp. KTR9]
Length = 419
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 116/197 (58%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 276
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE FV P D + ++ ++ A + + YRV+++ G L +A++K D E
Sbjct: 277 FDKVEGFVYCRPEDAAAEHQ--RLLGWEKDMLAAIDVPYRVIDVAGGDLGSSASRKYDCE 334
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETH 190
AW P G +REL S SNC +Q+RRL +RY K A ATTR + AILE H
Sbjct: 335 AWIPTQGTYRELTSTSNCTTFQARRLSIRYRDENGKPQTAATLNGTLATTRWLVAILENH 394
Query: 191 QTETG-VRIPDCLRKFV 206
Q G VR+P L KFV
Sbjct: 395 QQPDGSVRLPAELAKFV 411
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D + ++ ++ A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEGFVYCRPED--AAAEHQRLLGWEKDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 325 SSASRKYDCEAWIPTQGTYRELTSTSNCTTFQARRLSIRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L KFV
Sbjct: 381 LATTRWLVAILENHQQPDGSVRLPAELAKFV 411
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREA 261
>gi|171186061|ref|YP_001794980.1| seryl-tRNA synthetase [Pyrobaculum neutrophilum V24Sta]
gi|229470723|sp|B1Y9Y4.1|SYS_THENV RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|170935273|gb|ACB40534.1| seryl-tRNA synthetase [Pyrobaculum neutrophilum V24Sta]
Length = 447
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 124/202 (61%), Gaps = 9/202 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A L E LP+ ++G S CFR+E G+ RD +GIFRVH
Sbjct: 234 KIEGEDLYLIATAEHGIAAYLHKRELVEEELPLLFVGWSPCFRKEAGAGNRDLKGIFRVH 293
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
F KVEQFV + P D SWK +E+ +N+E DLG+ YRVVNI + L AAKK D+
Sbjct: 294 IFHKVEQFVFSLPED--SWKWHEEITKNTESLIRDLGLPYRVVNICAHDLGAPAAKKYDI 351
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIYATAC---ATTRVICAILE 188
EAW+P G +REL SCSN D+QS RL + R G ++ ++ C ATTR I AILE
Sbjct: 352 EAWYPAQGMYRELASCSNVTDWQSYRLGIRVTRKGMRREFVHTLNCTGLATTRTITAILE 411
Query: 189 THQTETG-VRIPDCLRKFVPAV 209
Q E G V IP LR ++ +
Sbjct: 412 NFQREDGAVEIPKALRPYLEPI 433
Score = 146 bits (369), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVH F KVEQFV + P D SWK +E+ +N+E DLG+ YRVVNI + L
Sbjct: 285 DLKGIFRVHIFHKVEQFVFSLPED--SWKWHEEITKNTESLIRDLGLPYRVVNICAHDLG 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+EAW+P G +REL SCSN +QS RL +R + + EFVH LN T
Sbjct: 343 APAAKKYDIEAWYPAQGMYRELASCSNVTDWQSYRLGIR---VTRKGMRREFVHTLNCTG 399
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AILE Q E G V IP LR ++ +
Sbjct: 400 LATTRTITAILENFQREDGAVEIPKALRPYLEPI 433
>gi|145221742|ref|YP_001132420.1| seryl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
gi|145214228|gb|ABP43632.1| seryl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
Length = 445
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 120/201 (59%), Gaps = 13/201 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L + P+RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 245 DDLYLVGTSEVPLAGYHSDEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 304
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+ D ++ + A + + YRV++I +G L +AA+K D EAW
Sbjct: 305 VEGFVYCRPEEAEAEH--DRLLGWQRQLLAAIEVPYRVIDIAAGDLGSSAARKYDCEAWV 362
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETHQT 192
P +REL S SNC +Q+RRL VRY QT + T ATTR + AILE HQ
Sbjct: 363 PTQQTYRELTSTSNCTTFQARRLAVRYRDENGRPQTAATLNGT-LATTRWLVAILENHQQ 421
Query: 193 ETG-VRIPDCLRKFVPAVYLN 212
G VRIP+ L VP V N
Sbjct: 422 PDGSVRIPEAL---VPHVGTN 439
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P + E+ D ++ + A + + YRV++I +G L
Sbjct: 292 DTRGIIRVHQFDKVEGFVYCRPEEAEAEH--DRLLGWQRQLLAAIEVPYRVIDIAAGDLG 349
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N + + LN T
Sbjct: 350 SSAARKYDCEAWVPTQQTYRELTSTSNCTTFQARRLAVRY---RDENGRPQTAATLNGT- 405
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVN 458
ATTR + AILE HQ G VRIP+ L VP V N
Sbjct: 406 LATTRWLVAILENHQQPDGSVRIPEAL---VPHVGTN 439
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L + P+RY G S+CFR+E
Sbjct: 245 DDLYLVGTSEVPLAGYHSDEILDLSGGPLRYAGWSSCFRREA 286
>gi|343926267|ref|ZP_08765776.1| seryl-tRNA synthetase [Gordonia alkanivorans NBRC 16433]
gi|343763896|dbj|GAA12702.1| seryl-tRNA synthetase [Gordonia alkanivorans NBRC 16433]
Length = 419
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 117/197 (59%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 276
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE F+ P D E+ ++ ++ A + + YRV+++ G L +A++K D E
Sbjct: 277 FDKVEGFIYCRPEDAEAEHQ--RLLGWEKDMLAAIDVPYRVIDVAGGDLGSSASRKFDCE 334
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETH 190
AW P A+REL S SNC +Q+RRL +RY K A ATTR + AILE H
Sbjct: 335 AWVPTQNAYRELTSTSNCTTFQARRLSIRYRDENGKPQTAATLNGTLATTRWLVAILENH 394
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V++P L KFV
Sbjct: 395 QQPDGSVKLPPELAKFV 411
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ ++ ++ A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEGFIYCRPEDAEAEHQ--RLLGWEKDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P A+REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 325 SSASRKFDCEAWVPTQNAYRELTSTSNCTTFQARRLSIRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V++P L KFV
Sbjct: 381 LATTRWLVAILENHQQPDGSVKLPPELAKFV 411
Score = 47.4 bits (111), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREA 261
>gi|422494802|ref|ZP_16571097.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA1]
gi|313813962|gb|EFS51676.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA1]
Length = 424
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQDRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQDRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|441142673|ref|ZP_20962541.1| seryl-tRNA ligase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440622618|gb|ELQ85397.1| seryl-tRNA ligase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 429
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIVDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D ++ ++ +++ L + ++V+++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVDPEDAQAEHQ--RLLDWEKQWLTGLELPFQVIDVATGDLGASASRKYDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIYATACATTRVICAIL 187
W P G +REL S SNC ++Q+RRL VR K + T CA R I AI
Sbjct: 339 WIPTQGKYRELTSASNCDEFQARRLSVRMRTNKDGKQQVKPLATLNGTLCAVPRTIVAIF 398
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E HQ G VR+P+ LR ++
Sbjct: 399 ENHQQADGSVRVPELLRPYL 418
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F P D ++ ++ +++ L + ++V+++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVDPEDAQAEHQ--RLLDWEKQWLTGLELPFQVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K ++++ + LN T
Sbjct: 328 ASASRKYDCEAWIPTQGKYRELTSASNCDEFQARRLSVRMRTNKDGKQQVKPLATLNGTL 387
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AI E HQ G VR+P+ LR ++
Sbjct: 388 CAVPRTIVAIFENHQQADGSVRVPELLRPYL 418
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + LP+RY G S CFR+E
Sbjct: 221 EKDDYYLVGTSEVPLAAYHMDEIVDADKLPLRYAGFSPCFRREA 264
>gi|126460407|ref|YP_001056685.1| seryl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
gi|166223275|sp|A3MX52.1|SYS_PYRCJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|126250128|gb|ABO09219.1| seryl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
Length = 454
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 121/199 (60%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A L E LP Y+G S CFR+E G+ RD +GIFRVH
Sbjct: 236 KIEGEDLYLIATAEHGIAAYLYKRELLEEELPQLYVGWSPCFRKEAGAGNRDLKGIFRVH 295
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
F KVEQFV + P +ESWK +E+ +N+EE LG+ YRVVNI + L AAKK D+
Sbjct: 296 IFHKVEQFVFSLP--EESWKWHEEITRNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDI 353
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIYATAC---ATTRVICAILE 188
E W+P +REL SCSN D+QS RL + R G K+ ++ C ATTR I AILE
Sbjct: 354 EVWYPAQAKYRELASCSNVTDWQSYRLGIRVTRKGMKKEYVHTLNCTGLATTRTITAILE 413
Query: 189 THQTETG-VRIPDCLRKFV 206
Q + G V IP LR ++
Sbjct: 414 NFQRDDGVVEIPKALRPYL 432
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 97/151 (64%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVH F KVEQFV + P +ESWK +E+ +N+EE LG+ YRVVNI + L
Sbjct: 287 DLKGIFRVHIFHKVEQFVFSLP--EESWKWHEEITRNTEELIRGLGLPYRVVNICAHDLG 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+E W+P +REL SCSN +QS RL +R T+K +K E+VH LN T
Sbjct: 345 APAAKKYDIEVWYPAQAKYRELASCSNVTDWQSYRLGIRV--TRKGMKK-EYVHTLNCTG 401
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE Q + G V IP LR ++
Sbjct: 402 LATTRTITAILENFQRDDGVVEIPKALRPYL 432
>gi|397669142|ref|YP_006510677.1| serine--tRNA ligase [Propionibacterium propionicum F0230a]
gi|395143730|gb|AFN47837.1| serine--tRNA ligase [Propionibacterium propionicum F0230a]
Length = 423
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 118/203 (58%), Gaps = 8/203 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + A H D L SLP RY S CFR+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDLYLVGTSEVALAAFHSDEILDADSLPRRYAAFSPCFRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ P D E W ++ +EF L I ++V+++ SG L +AA+K D AW
Sbjct: 283 VEMFIHCLPEDAEDWHQ--RLLGFEKEFLQALEIPFQVLDVASGDLGLSAARKYDCYAWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +RY K + T CA TR+I +LE HQ
Sbjct: 341 PTQQRYREVTSTSNCTQFQARRLGIRYRTEKGTEHVATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFVPAVYLNEAG 215
G VR+P+ LR + + + AG
Sbjct: 401 DGSVRVPEALRPHLGGLEVLTAG 423
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 93/160 (58%), Gaps = 7/160 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE F+ P D E W ++ +EF L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFIHCLPEDAEDWH--QRLLGFEKEFLQALEIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D AW P +RE+ S SNC +Q+RRL +RY + + E V LN T
Sbjct: 328 LSAARKYDCYAWLPTQQRYREVTSTSNCTQFQARRLGIRY----RTEKGTEHVATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAG 461
CA TR+I +LE HQ G VR+P+ LR + + V AG
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRVPEALRPHLGGLEVLTAG 423
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + A H D L SLP RY S CFR+E
Sbjct: 223 DDLYLVGTSEVALAAFHSDEILDADSLPRRYAAFSPCFRREA 264
>gi|404260194|ref|ZP_10963491.1| serine--tRNA ligase [Gordonia namibiensis NBRC 108229]
gi|403401305|dbj|GAC01901.1| serine--tRNA ligase [Gordonia namibiensis NBRC 108229]
Length = 419
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 116/197 (58%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 276
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE F+ P D E+ ++ ++ A + + YRV+++ G L +AA+K D E
Sbjct: 277 FDKVEGFIYCKPEDAEAEHQ--RLLGWEKDMLAAIDVPYRVIDVAGGDLGSSAARKFDCE 334
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETH 190
AW P +REL S SNC +Q+RRL +RY K A ATTR + AILE H
Sbjct: 335 AWVPTQNTYRELTSTSNCTTFQARRLSIRYRDENGKPQTAATLNGTLATTRWLVAILENH 394
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V++P L KFV
Sbjct: 395 QQPDGSVKLPPELAKFV 411
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ ++ ++ A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEGFIYCKPEDAEAEHQ--RLLGWEKDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V++P L KFV
Sbjct: 381 LATTRWLVAILENHQQPDGSVKLPPELAKFV 411
Score = 47.4 bits (111), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREA 261
>gi|51245616|ref|YP_065500.1| seryl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|67461743|sp|Q6AMD2.1|SYS_DESPS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|50876653|emb|CAG36493.1| probable seryl-tRNA synthetase [Desulfotalea psychrophila LSv54]
Length = 425
Score = 166 bits (419), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 118/194 (60%), Gaps = 10/194 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D YLI T+E P+ +HRD + E LPI+Y + CFR E GSHGRDTRG+ R HQF KV
Sbjct: 229 DLYLIPTAEVPVTNIHRDETIAEQDLPIKYTAFTPCFRSEAGSHGRDTRGLVRQHQFNKV 288
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T+P + S L+ ++ ++EE LG+ YRVV + +G L +++K D+E W P
Sbjct: 289 ELVKFTTP--ERSTDELESLLGDAEEVLQLLGLHYRVVKLCTGDLGFSSSKTYDIEVWLP 346
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIYAT----ACATTRVICAILETHQT 192
G +RE+ SCSN LD+Q+RR +RY GQ K K+ T A R + A++E +Q
Sbjct: 347 GQQKYREISSCSNFLDFQARRGGIRYRPEGQKKSKLVHTLNGSGLAVGRTLLAVMENYQQ 406
Query: 193 ETG-VRIPDCLRKF 205
E G + IP+ L+ +
Sbjct: 407 EDGSITIPEVLKPY 420
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 90/153 (58%), Gaps = 11/153 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF KVE T+P + S L+ ++ ++EE LG+ YRVV + +G L
Sbjct: 275 DTRGLVRQHQFNKVELVKFTTP--ERSTDELESLLGDAEEVLQLLGLHYRVVKLCTGDLG 332
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY---GQTKKMNEKIEFVHMLN 419
+++K D+E W PG +RE+ SCSN L +Q+RR +RY GQ K + VH LN
Sbjct: 333 FSSSKTYDIEVWLPGQQKYREISSCSNFLDFQARRGGIRYRPEGQKKS-----KLVHTLN 387
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+ A R + A++E +Q E G + IP+ L+ +
Sbjct: 388 GSGLAVGRTLLAVMENYQQEDGSITIPEVLKPY 420
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D YLI T+E P+ +HRD + E LPI+Y + CFR E
Sbjct: 229 DLYLIPTAEVPVTNIHRDETIAEQDLPIKYTAFTPCFRSEA 269
>gi|262200213|ref|YP_003271421.1| seryl-tRNA synthetase [Gordonia bronchialis DSM 43247]
gi|262083560|gb|ACY19528.1| seryl-tRNA synthetase [Gordonia bronchialis DSM 43247]
Length = 419
Score = 166 bits (419), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 119/197 (60%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H + + + P RY G S+CFR+E GS+G+DTRGI RVHQ
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMNEIVDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQ 276
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE FV P D ++ ++ +E A + + YRV+++ G L +AA+K D E
Sbjct: 277 FDKVEGFVYCKPEDADAEHQ--RLLGWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCE 334
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETH 190
AW P +REL S SNC YQ+RRL +RY K +I AT ATTR + AILE H
Sbjct: 335 AWVPTQNTYRELTSTSNCTTYQARRLSIRYRDDSGKPQIAATLNGTLATTRWLVAILENH 394
Query: 191 QTETG-VRIPDCLRKFV 206
Q G VR+P L KFV
Sbjct: 395 QQPDGSVRLPAELAKFV 411
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D ++ ++ +E A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEGFVYCKPEDADAEHQ--RLLGWEKEMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC YQ+RRL +RY + + K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQNTYRELTSTSNCTTYQARRLSIRY---RDDSGKPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L KFV
Sbjct: 381 LATTRWLVAILENHQQPDGSVRLPAELAKFV 411
Score = 43.1 bits (100), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ DD YL+ TSE P+ H + + + P RY G S+CFR+E
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMNEIVDLSDGPKRYAGWSSCFRREA 261
>gi|441510939|ref|ZP_20992837.1| serine--tRNA ligase [Gordonia aichiensis NBRC 108223]
gi|441444917|dbj|GAC50798.1| serine--tRNA ligase [Gordonia aichiensis NBRC 108223]
Length = 423
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 119/197 (60%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D + + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 216 DKEDDLYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 275
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE FV P D + +++ +E A + + YRV+++ G L +AA+K D E
Sbjct: 276 FDKVEGFVYCKPEDAAAEHQ--KLLGWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCE 333
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETH 190
AW P +REL S SNC +Q+RRL +RY K +I AT ATTR I AILE H
Sbjct: 334 AWVPTQQTYRELTSTSNCTTFQARRLSIRYRDDSGKPQIAATLNGTLATTRWIVAILENH 393
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V +PD L ++V
Sbjct: 394 QQADGSVVLPDELARYV 410
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D + +++ +E A + + YRV+++ G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCKPED--AAAEHQKLLGWEKEMLAAIDVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + + K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLSIRY---RDDSGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V +PD L ++V
Sbjct: 380 LATTRWIVAILENHQQADGSVVLPDELARYV 410
Score = 47.4 bits (111), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 516 EVIGKGEKVGDSAPEK---DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 572
EV+G +G A E D+ DD YL+ TSE P+ H D + + P RY G STCF
Sbjct: 197 EVMGGTGFLGAHADEVYHLDKEDDLYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSTCF 256
Query: 573 RQEC 576
R+E
Sbjct: 257 RREA 260
>gi|226363330|ref|YP_002781112.1| seryl-tRNA synthetase [Rhodococcus opacus B4]
gi|254783043|sp|C1B914.1|SYS_RHOOB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226241819|dbj|BAH52167.1| seryl-tRNA synthetase [Rhodococcus opacus B4]
Length = 418
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 112/194 (57%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L A P RY G STCFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D ++ ++ + A + + YRV+++ G L +AA+K D EAW
Sbjct: 280 VEMFTYCKPEDADAEHQ--RLLAWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL VRY K A ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTFQARRLGVRYRDENGKPQTAATLNGTLATTRWIVAILENHQQS 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ L FV
Sbjct: 398 DGTVRVPEALVPFV 411
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ ++ + A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFTYCKPEDADAEHQ--RLLAWERDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQQAYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P+ L FV
Sbjct: 381 LATTRWIVAILENHQQSDGTVRVPEALVPFV 411
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H L A P RY G STCFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREA 261
>gi|422431716|ref|ZP_16508587.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA2]
gi|422509569|ref|ZP_16585725.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA1]
gi|313817098|gb|EFS54812.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA1]
gi|315100032|gb|EFT72008.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA2]
Length = 424
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++++++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQMLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++++++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQMLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 47.8 bits (112), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|161899419|ref|XP_001712936.1| seryl-tRNA synthetase [Bigelowiella natans]
gi|75756430|gb|ABA27324.1| seryl-tRNA synthetase [Bigelowiella natans]
Length = 408
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YLIAT+EQ IC+ ++ + LP++ STCFR+E GSHG D+ G+FRVHQFEK+EQ
Sbjct: 206 YLIATAEQAICSQMYNNTYKISDLPLKLCCYSTCFRKEAGSHGIDSGGLFRVHQFEKIEQ 265
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F+++ K +++ SE+FY + + Y++V + S LN + K D+EAWFPGS
Sbjct: 266 FIISYSRYFLKNKEFQLLLERSEKFYQQIRLPYQIVEMNSSELNSFSFIKYDIEAWFPGS 325
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQ------KIYATACATTRVICAILETHQTETG 195
+RE+VSC+NCL+ QS L + +T AT R++CA++E Q + G
Sbjct: 326 KTYREVVSCTNCLNMQSNSLKSKIKTQNSFDCDMCTFNSTLAATERLMCALVENFQVKEG 385
Query: 196 VRIPDCLRKF 205
V+IP CLRK+
Sbjct: 386 VKIPHCLRKY 395
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 94/153 (61%), Gaps = 9/153 (5%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
+D+ G+FRVHQFEK+EQF+++ K +++ SE+FY + + Y++V + S L
Sbjct: 249 IDSGGLFRVHQFEKIEQFIISYSRYFLKNKEFQLLLERSEKFYQQIRLPYQIVEMNSSEL 308
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF---VHML 418
N + K D+EAWFPGS +RE+VSC+NCL QS L K+ + F +
Sbjct: 309 NSFSFIKYDIEAWFPGSKTYREVVSCTNCLNMQSNSL------KSKIKTQNSFDCDMCTF 362
Query: 419 NATACATTRVICAILETHQTETGVRIPDCLRKF 451
N+T AT R++CA++E Q + GV+IP CLRK+
Sbjct: 363 NSTLAATERLMCALVENFQVKEGVKIPHCLRKY 395
>gi|384103222|ref|ZP_10004199.1| seryl-tRNA synthetase [Rhodococcus imtechensis RKJ300]
gi|419965243|ref|ZP_14481191.1| seryl-tRNA ligase [Rhodococcus opacus M213]
gi|432340612|ref|ZP_19590038.1| seryl-tRNA ligase [Rhodococcus wratislaviensis IFP 2016]
gi|383839063|gb|EID78420.1| seryl-tRNA synthetase [Rhodococcus imtechensis RKJ300]
gi|414569353|gb|EKT80098.1| seryl-tRNA ligase [Rhodococcus opacus M213]
gi|430774361|gb|ELB89963.1| seryl-tRNA ligase [Rhodococcus wratislaviensis IFP 2016]
Length = 418
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 112/194 (57%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L A P RY G STCFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D ++ ++ + A + + YRV+++ G L +AA+K D EAW
Sbjct: 280 VEMFTYCKPEDADAEHQ--RLLGWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL VRY K A ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTFQARRLGVRYRDENGKPQTAATLNGTLATTRWIVAILENHQQS 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ L FV
Sbjct: 398 DGTVRVPEALVPFV 411
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ ++ + A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFTYCKPEDADAEHQ--RLLGWERDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQQAYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P+ L FV
Sbjct: 381 LATTRWIVAILENHQQSDGTVRVPEALVPFV 411
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H L A P RY G STCFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREA 261
>gi|365868145|ref|ZP_09407698.1| seryl-tRNA synthetase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|397678343|ref|YP_006519878.1| serine--tRNA ligase [Mycobacterium massiliense str. GO 06]
gi|414582185|ref|ZP_11439325.1| serine--tRNA ligase [Mycobacterium abscessus 5S-1215]
gi|418250439|ref|ZP_12876683.1| seryl-tRNA synthetase [Mycobacterium abscessus 47J26]
gi|420880308|ref|ZP_15343675.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0304]
gi|420886884|ref|ZP_15350244.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0421]
gi|420887058|ref|ZP_15350416.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0422]
gi|420895704|ref|ZP_15359043.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0708]
gi|420901055|ref|ZP_15364386.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0817]
gi|420907710|ref|ZP_15371028.1| serine--tRNA ligase [Mycobacterium abscessus 5S-1212]
gi|420934297|ref|ZP_15397570.1| serine--tRNA ligase [Mycobacterium massiliense 1S-151-0930]
gi|420935297|ref|ZP_15398567.1| serine--tRNA ligase [Mycobacterium massiliense 1S-152-0914]
gi|420944557|ref|ZP_15407812.1| serine--tRNA ligase [Mycobacterium massiliense 1S-153-0915]
gi|420949509|ref|ZP_15412758.1| serine--tRNA ligase [Mycobacterium massiliense 1S-154-0310]
gi|420949846|ref|ZP_15413093.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0626]
gi|420958836|ref|ZP_15422070.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0107]
gi|420959678|ref|ZP_15422909.1| serine--tRNA ligase [Mycobacterium massiliense 2B-1231]
gi|420969758|ref|ZP_15432959.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0921]
gi|420994767|ref|ZP_15457913.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0307]
gi|420995732|ref|ZP_15458875.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0912-R]
gi|421000248|ref|ZP_15463381.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0912-S]
gi|421049074|ref|ZP_15512069.1| serine--tRNA ligase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|353449675|gb|EHB98071.1| seryl-tRNA synthetase [Mycobacterium abscessus 47J26]
gi|364001516|gb|EHM22711.1| seryl-tRNA synthetase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|392082647|gb|EIU08473.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0421]
gi|392085217|gb|EIU11042.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0304]
gi|392093772|gb|EIU19568.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0422]
gi|392095016|gb|EIU20811.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0708]
gi|392098416|gb|EIU24210.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0817]
gi|392105614|gb|EIU31400.1| serine--tRNA ligase [Mycobacterium abscessus 5S-1212]
gi|392117337|gb|EIU43105.1| serine--tRNA ligase [Mycobacterium abscessus 5S-1215]
gi|392132709|gb|EIU58454.1| serine--tRNA ligase [Mycobacterium massiliense 1S-151-0930]
gi|392146163|gb|EIU71887.1| serine--tRNA ligase [Mycobacterium massiliense 1S-153-0915]
gi|392146804|gb|EIU72525.1| serine--tRNA ligase [Mycobacterium massiliense 1S-152-0914]
gi|392150550|gb|EIU76263.1| serine--tRNA ligase [Mycobacterium massiliense 1S-154-0310]
gi|392164932|gb|EIU90619.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0626]
gi|392175696|gb|EIV01357.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0921]
gi|392180869|gb|EIV06521.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0307]
gi|392191552|gb|EIV17177.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0912-R]
gi|392202402|gb|EIV27998.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0912-S]
gi|392240987|gb|EIV66477.1| serine--tRNA ligase [Mycobacterium massiliense CCUG 48898]
gi|392248562|gb|EIV74038.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0107]
gi|392256890|gb|EIV82344.1| serine--tRNA ligase [Mycobacterium massiliense 2B-1231]
gi|395456608|gb|AFN62271.1| Serine--tRNA ligase [Mycobacterium massiliense str. GO 06]
Length = 418
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE PI H L + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EEDDLYLVGTSEVPIAGYHSGEILDLNNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E ++++ + + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEAFVYCKPEDAEVEH--EKILGWERQMLGHIEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P A+REL S SNC +Q+RRL VRY K +I AT ATTR + AILE HQ
Sbjct: 335 WVPTQRAYRELTSTSNCTTFQARRLAVRYRDENGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 395 QPDGSVRVPAALVPFV 410
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E ++++ + + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEAFVYCKPEDAEVEH--EKILGWERQMLGHIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQRAYRELTSTSNCTTFQARRLAVRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPAALVPFV 410
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 516 EVIGKGEKVGDSAPEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
E++G +G A E L DD YL+ TSE PI H L + P+RY G S+CFR
Sbjct: 198 EIMGGTGFLGAHADEVYHLEEDDLYLVGTSEVPIAGYHSGEILDLNNGPLRYAGWSSCFR 257
Query: 574 QEC 576
+E
Sbjct: 258 REA 260
>gi|310778421|ref|YP_003966754.1| seryl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
gi|309747744|gb|ADO82406.1| seryl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
Length = 423
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 121/199 (60%), Gaps = 10/199 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ +LI+TSE + +HR L E+ LP Y S CFR+E GS+GRD +G+ R HQF K
Sbjct: 222 DEMFLISTSEITLTNLHRKEILEESDLPKYYTAHSPCFRREAGSYGRDVKGLIRQHQFNK 281
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T+P + S+ LD+M+ N+E LG+ YR+V + SG + +AAK DLE W
Sbjct: 282 VEMVKITTPEN--SYDELDKMVVNAETVLQKLGLPYRLVQLCSGDIGFSAAKTYDLEVWL 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIYAT----ACATTRVICAILETHQ 191
PG G +RE+ SCSNC D+Q+RR+ ++Y G K + T A R + AI+E +Q
Sbjct: 340 PGQGKYREISSCSNCGDFQARRMGLKYRPEGTKKSEFVNTLNGSGVAVGRALLAIMENYQ 399
Query: 192 TETG-VRIPDCLRKFVPAV 209
E G + IP+ LR ++ +
Sbjct: 400 QEDGSIIIPEALRPYMGGI 418
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 97/156 (62%), Gaps = 5/156 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +G+ R HQF KVE +T+P + S+ LD+M+ N+E LG+ YR+V + SG +
Sbjct: 269 DVKGLIRQHQFNKVEMVKITTPEN--SYDELDKMVVNAETVLQKLGLPYRLVQLCSGDIG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK DLE W PG G +RE+ SCSNC +Q+RR+ ++Y + +K EFV+ LN +
Sbjct: 327 FSAAKTYDLEVWLPGQGKYREISSCSNCGDFQARRMGLKY--RPEGTKKSEFVNTLNGSG 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
A R + AI+E +Q E G + IP+ LR ++ + V
Sbjct: 385 VAVGRALLAIMENYQQEDGSIIIPEALRPYMGGIDV 420
>gi|251800106|ref|YP_003014837.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2]
gi|247547732|gb|ACT04751.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2]
Length = 425
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 121/194 (62%), Gaps = 8/194 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
DKYL+ TSE P+ + + D+ + +AS PIR STCFR EVGS G+D G++RVHQF KV
Sbjct: 225 DKYLVGTSEVPLISFY-DNEIVDASKPIRLAAASTCFRSEVGSAGKDVHGLYRVHQFSKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
EQ ++ + S +ML E+ QN+E+ L + YRV+ + +G ++ K+ D+E W P
Sbjct: 284 EQVIICEDSVEASEQMLQEITQNAEDLLQQLELPYRVMAVCTGDMSQKTYKQFDIETWMP 343
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTE 193
AF E S SN LD+Q+RR +RY + K+ TA A+ R++ +LETHQ E
Sbjct: 344 SRQAFGETHSSSNLLDFQARRSNIRYRDAQGKLRFCHTLNNTAVASPRILIPLLETHQEE 403
Query: 194 TG-VRIPDCLRKFV 206
G +RIP+ LRK++
Sbjct: 404 DGSIRIPEALRKYM 417
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A D G++RVHQF KVEQ ++ + S + L E+ QN+E+ L + YRV+
Sbjct: 262 SEVGSAGKDVHGLYRVHQFSKVEQVIICEDSVEASEQMLQEITQNAEDLLQQLELPYRVM 321
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G ++ K+ D+E W P AF E S SN L +Q+RR +RY + K+ F
Sbjct: 322 AVCTGDMSQKTYKQFDIETWMPSRQAFGETHSSSNLLDFQARRSNIRY---RDAQGKLRF 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
H LN TA A+ R++ +LETHQ E G +RIP+ LRK++
Sbjct: 379 CHTLNNTAVASPRILIPLLETHQEEDGSIRIPEALRKYM 417
Score = 43.1 bits (100), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
DKYL+ TSE P+ + + D+ + +AS PIR STCFR E +
Sbjct: 225 DKYLVGTSEVPLISFY-DNEIVDASKPIRLAAASTCFRSEVGSA 267
>gi|315446522|ref|YP_004079401.1| seryl-tRNA synthetase [Mycobacterium gilvum Spyr1]
gi|315264825|gb|ADU01567.1| seryl-tRNA synthetase [Mycobacterium gilvum Spyr1]
Length = 419
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 116/191 (60%), Gaps = 10/191 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L + P+RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 219 DDLYLVGTSEVPLAGYHSDEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+ D ++ + A + + YRV++I +G L +AA+K D EAW
Sbjct: 279 VEGFVYCRPEEAEAEH--DRLLGWQRQLLAAIEVPYRVIDIAAGDLGSSAARKYDCEAWV 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETHQT 192
P +REL S SNC +Q+RRL VRY QT + T ATTR + AILE HQ
Sbjct: 337 PTQQTYRELTSTSNCTTFQARRLAVRYRDENGRPQTAATLNGT-LATTRWLVAILENHQQ 395
Query: 193 ETG-VRIPDCL 202
G VRIP+ L
Sbjct: 396 PDGSVRIPEAL 406
Score = 120 bits (300), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 88/147 (59%), Gaps = 7/147 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P + E+ D ++ + A + + YRV++I +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCRPEEAEAEH--DRLLGWQRQLLAAIEVPYRVIDIAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N + + LN T
Sbjct: 324 SSAARKYDCEAWVPTQQTYRELTSTSNCTTFQARRLAVRY---RDENGRPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCL 448
ATTR + AILE HQ G VRIP+ L
Sbjct: 380 LATTRWLVAILENHQQPDGSVRIPEAL 406
Score = 47.0 bits (110), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L + P+RY G S+CFR+E
Sbjct: 219 DDLYLVGTSEVPLAGYHSDEILDLSGGPLRYAGWSSCFRREA 260
>gi|325108605|ref|YP_004269673.1| seryl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
gi|324968873|gb|ADY59651.1| seryl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
Length = 428
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 125/198 (63%), Gaps = 11/198 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D L+AT+E + + +D L EA+LP++ G+S CFR E G+HGR TRGI+RVHQF KV
Sbjct: 222 DLSLVATAEITLGGMLKDEILDEANLPVKTAGISHCFRTEAGAHGRATRGIYRVHQFTKV 281
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E F T+P S + +++ EE + LGI YRV++I +G + A +K DLEAW P
Sbjct: 282 EIFGFTTPDTAVSDEYHQMILRIEEEIFQGLGIPYRVLDIATGDMGGPAYRKFDLEAWMP 341
Query: 140 G---SGAFRELVSCSNCLDYQSRRLLVR-YGQTKQ------KIYATACATTRVICAILET 189
G +G + E+ SCSNC DYQSRRL +R G+ K+ + TA A +R + A++E
Sbjct: 342 GRGEAGEYGEVTSCSNCTDYQSRRLNIRCRGKEKKGTQFVHTLNGTAVAVSRAMIALVEN 401
Query: 190 HQTETG-VRIPDCLRKFV 206
+Q G +R+P+ L+K+V
Sbjct: 402 YQQADGSIRVPEALQKWV 419
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 98/154 (63%), Gaps = 8/154 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
TRGI+RVHQF KVE F T+P S + +++ EE + LGI YRV++I +G +
Sbjct: 269 TRGIYRVHQFTKVEIFGFTTPDTAVSDEYHQMILRIEEEIFQGLGIPYRVLDIATGDMGG 328
Query: 364 AAAKKLDLEAWFPG---SGAFRELVSCSNCLAYQSRRLLVR-YGQTKKMNEKIEFVHMLN 419
A +K DLEAW PG +G + E+ SCSNC YQSRRL +R G+ KK +FVH LN
Sbjct: 329 PAYRKFDLEAWMPGRGEAGEYGEVTSCSNCTDYQSRRLNIRCRGKEKK---GTQFVHTLN 385
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
TA A +R + A++E +Q G +R+P+ L+K+V
Sbjct: 386 GTAVAVSRAMIALVENYQQADGSIRVPEALQKWV 419
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 494 EAMIQNEKDLIATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRD 553
E +++ +I+T N + E +G + ++ E D L+AT+E + + +D
Sbjct: 180 EKLVKEGFTIISTPDLARNEVLEGVGFNPRGDEAQIYSVENTDLSLVATAEITLGGMLKD 239
Query: 554 SWLPEASLPIRYLGVSTCFRQECDA 578
L EA+LP++ G+S CFR E A
Sbjct: 240 EILDEANLPVKTAGISHCFRTEAGA 264
>gi|304391793|ref|ZP_07373735.1| seryl-tRNA synthetase [Ahrensia sp. R2A130]
gi|303296022|gb|EFL90380.1| seryl-tRNA synthetase [Ahrensia sp. R2A130]
Length = 426
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 121/204 (59%), Gaps = 10/204 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YLI TSE P+ + R+S L E +LP RY ++ CFR E GS GRDTRG+ R HQF K
Sbjct: 224 DDRYLIPTSEAPLTNLVRESILDEKTLPRRYTALTNCFRAEAGSAGRDTRGMLRQHQFAK 283
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
E +T+P + ++ + M+ +EE LG+ YRVV + +G L +A + LD+E W
Sbjct: 284 CEMVSITTPDNSDAEQQ--RMVGCAEEVLKRLGLHYRVVKLCTGDLGFSARRTLDIEVWL 341
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQ 191
PG FRE+ SCS C D+Q+RR+ RY +K + + A R + A++E +Q
Sbjct: 342 PGQDTFREISSCSTCGDFQARRMDARYRPEGEKQPVHVHTLNGSGIAVGRALIAVMENYQ 401
Query: 192 TETG-VRIPDCLRKFVPAVYLNEA 214
E G +R+PD L+ ++ + EA
Sbjct: 402 NEDGSIRVPDVLQSYMGGTTVIEA 425
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 95/170 (55%), Gaps = 11/170 (6%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
+E A DTRG+ R HQF K E +T+P D S M+ +EE LG+ YRVV
Sbjct: 263 AEAGSAGRDTRGMLRQHQFAKCEMVSITTP--DNSDAEQQRMVGCAEEVLKRLGLHYRVV 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY---GQTKKMNEK 411
+ +G L +A + LD+E W PG FRE+ SCS C +Q+RR+ RY G+ + ++
Sbjct: 321 KLCTGDLGFSARRTLDIEVWLPGQDTFREISSCSTCGDFQARRMDARYRPEGEKQPVH-- 378
Query: 412 IEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEA 460
VH LN + A R + A++E +Q E G +R+PD L+ ++ V EA
Sbjct: 379 ---VHTLNGSGIAVGRALIAVMENYQNEDGSIRVPDVLQSYMGGTTVIEA 425
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTYFHVT 588
DD+YLI TSE P+ + R+S L E +LP RY ++ CFR E + GM R +
Sbjct: 224 DDRYLIPTSEAPLTNLVRESILDEKTLPRRYTALTNCFRAEAGSAGRDTRGMLRQHQFAK 283
Query: 589 C 589
C
Sbjct: 284 C 284
>gi|358446177|ref|ZP_09156726.1| serine--tRNA ligase [Corynebacterium casei UCMA 3821]
gi|356607859|emb|CCE55045.1| serine--tRNA ligase [Corynebacterium casei UCMA 3821]
Length = 419
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 113/196 (57%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLSKGPIQYAGWSSCFRREAGSHGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D E + +++ E + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKVEMFTYCKPEDAEKQHL--QLLSMEREMLDAMNLHYRVIDVAGGDLGASAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 335 WVPTQGTYRELTSTSNCTTFQARRLQTRYRDENGKTQTAATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V IP+ LR +
Sbjct: 395 QADGSVVIPEALRPMM 410
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D E K +++ E + + YRV+++ G L
Sbjct: 266 DTRGILRVHQFDKVEMFTYCKPEDAE--KQHLQLLSMEREMLDAMNLHYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 ASAARKFDTEAWVPTQGTYRELTSTSNCTTFQARRLQTRY---RDENGKTQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V IP+ LR +
Sbjct: 380 LATTRWLVAILENNQQADGSVVIPEALRPMM 410
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLSKGPIQYAGWSSCFRREA 260
>gi|419420097|ref|ZP_13960326.1| seryl-tRNA synthetase [Propionibacterium acnes PRP-38]
gi|422394496|ref|ZP_16474537.1| serine--tRNA ligase [Propionibacterium acnes HL097PA1]
gi|422437309|ref|ZP_16514156.1| seryl-tRNA synthetase [Propionibacterium acnes HL092PA1]
gi|422492731|ref|ZP_16569036.1| seryl-tRNA synthetase [Propionibacterium acnes HL086PA1]
gi|422514980|ref|ZP_16591098.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA2]
gi|422523921|ref|ZP_16599932.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA2]
gi|422530308|ref|ZP_16606269.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA1]
gi|422544329|ref|ZP_16620169.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA1]
gi|313794154|gb|EFS42174.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA1]
gi|313803276|gb|EFS44472.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA2]
gi|313839192|gb|EFS76906.1| seryl-tRNA synthetase [Propionibacterium acnes HL086PA1]
gi|314964050|gb|EFT08150.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA1]
gi|315078297|gb|EFT50336.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA2]
gi|327334394|gb|EGE76105.1| serine--tRNA ligase [Propionibacterium acnes HL097PA1]
gi|327457587|gb|EGF04242.1| seryl-tRNA synthetase [Propionibacterium acnes HL092PA1]
gi|379978471|gb|EIA11795.1| seryl-tRNA synthetase [Propionibacterium acnes PRP-38]
Length = 424
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 119/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L + LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDVELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ LR ++
Sbjct: 401 DGSVRIPEALRPYL 414
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPQEAEAWH--EKLLSFEKDFITALQIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VRIP+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRIPEALRPYL 414
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L + LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDVELPKRYVAFSPCYRREA 264
>gi|336325083|ref|YP_004605049.1| seryl-tRNA synthetase [Corynebacterium resistens DSM 45100]
gi|336101065|gb|AEI08885.1| Seryl-tRNA synthetase [Corynebacterium resistens DSM 45100]
Length = 424
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H D + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 222 EEDDLYLVGTSEVALAGYHSDEIIDLNKGPVRYAGWSSCFRREAGSYGKDTRGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +E+ + E++Q ++ A + + YRV+++ G L +AA+K D EA
Sbjct: 282 DKLEMFVYCKP--EEAQSIHQELLQMEKDMLAAIEVPYRVIDVAGGDLGSSAARKYDTEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 340 WVPTQNTYRELTSTSNCTTFQARRLKTRYRDADGKAQTAATLNGTLATTRWLVAILENNQ 399
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L+ FV
Sbjct: 400 QADGSVRVPKALQPFV 415
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P + +S E++Q ++ A + + YRV+++ G L
Sbjct: 271 DTRGIIRVHQFDKLEMFVYCKPEEAQSIH--QELLQMEKDMLAAIEVPYRVIDVAGGDLG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 329 SSAARKYDTEAWVPTQNTYRELTSTSNCTTFQARRLKTRY---RDADGKAQTAATLNGT- 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G VR+P L+ FV
Sbjct: 385 LATTRWLVAILENNQQADGSVRVPKALQPFV 415
Score = 43.1 bits (100), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H D + P+RY G S+CFR+E
Sbjct: 222 EEDDLYLVGTSEVALAGYHSDEIIDLNKGPVRYAGWSSCFRREA 265
>gi|377564973|ref|ZP_09794281.1| seryl-tRNA synthetase [Gordonia sputi NBRC 100414]
gi|377527861|dbj|GAB39446.1| seryl-tRNA synthetase [Gordonia sputi NBRC 100414]
Length = 425
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 119/197 (60%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D + + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 219 DKDDDLYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 278
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE FV P D + +++ +E A + + YRV+++ G L +AA+K D E
Sbjct: 279 FDKVEGFVYCKPEDTAAEHQ--KLLGWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCE 336
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETH 190
AW P +REL S SNC +Q+RRL +RY K ++ AT ATTR + AILE H
Sbjct: 337 AWVPTQQTYRELTSTSNCTTFQARRLSIRYRDESGKPQVAATLNGTLATTRWLVAILENH 396
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V +PD L +FV
Sbjct: 397 QQADGSVVLPDELARFV 413
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D + +++ +E A + + YRV+++ G L
Sbjct: 269 DTRGIIRVHQFDKVEGFVYCKPEDTAAEHQ--KLLGWEKEMLAAIDVPYRVIDVAGGDLG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + + K + LN T
Sbjct: 327 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLSIRY---RDESGKPQVAATLNGT- 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +PD L +FV
Sbjct: 383 LATTRWLVAILENHQQADGSVVLPDELARFV 413
Score = 47.4 bits (111), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 516 EVIGKGEKVGDSAPEK---DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 572
EV+G +G A E D+ DD YL+ TSE P+ H D + + P RY G STCF
Sbjct: 200 EVMGGTGFLGAHADEVYHLDKDDDLYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSTCF 259
Query: 573 RQEC 576
R+E
Sbjct: 260 RREA 263
>gi|108803927|ref|YP_643864.1| seryl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
gi|123069166|sp|Q1AX26.1|SYS_RUBXD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|108765170|gb|ABG04052.1| seryl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
Length = 424
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 9/194 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D LIAT+E + D + E SLP R+ G+S CFR E G+HGR +RG++RVHQF KV
Sbjct: 223 DLSLIATAEITLAGQLVDEIVAEESLPRRFAGLSHCFRTEAGAHGRASRGLYRVHQFTKV 282
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E F T+P ++S +M +EM+ EE + L I YRVV+I +G L AA +K D+EAW P
Sbjct: 283 EMFAFTTP--EQSGEMHEEMLSIEEEIFRTLEIPYRVVDICTGDLGAAAYRKYDVEAWMP 340
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKIYATACATTRVICAILETHQTE 193
G G + E+ S SN DYQ+RRL +RY G+ + + TA A +R + A+LE HQ E
Sbjct: 341 GRGDYGEVTSTSNTTDYQARRLGIRYRPEGGRPRLLHTLNGTAIAVSRTMIALLENHQRE 400
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ L +V
Sbjct: 401 DGSVALPEALVPYV 414
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 93/150 (62%), Gaps = 6/150 (4%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
+RG++RVHQF KVE F T+P ++S + +EM+ EE + L I YRVV+I +G L
Sbjct: 270 SRGLYRVHQFTKVEMFAFTTP--EQSGEMHEEMLSIEEEIFRTLEIPYRVVDICTGDLGA 327
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 423
AA +K D+EAW PG G + E+ S SN YQ+RRL +RY + + +H LN TA
Sbjct: 328 AAYRKYDVEAWMPGRGDYGEVTSTSNTTDYQARRLGIRY---RPEGGRPRLLHTLNGTAI 384
Query: 424 ATTRVICAILETHQTETG-VRIPDCLRKFV 452
A +R + A+LE HQ E G V +P+ L +V
Sbjct: 385 AVSRTMIALLENHQREDGSVALPEALVPYV 414
>gi|350568410|ref|ZP_08936812.1| serine--tRNA ligase [Propionibacterium avidum ATCC 25577]
gi|348661630|gb|EGY78313.1| serine--tRNA ligase [Propionibacterium avidum ATCC 25577]
Length = 424
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E W ++++ ++F + L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPDEAEGWH--EKLLSFEKDFISALEIPFQVLDVASGDLGLSAARKYDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQSRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 401 DGSVRVPEALRPYL 414
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E W ++++ ++F + L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPDEAEGWH--EKLLSFEKDFISALEIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKYDCYGWLPTQSRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VR+P+ LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRVPEALRPYL 414
Score = 47.4 bits (111), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H D L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREA 264
>gi|409391472|ref|ZP_11243152.1| seryl-tRNA synthetase [Gordonia rubripertincta NBRC 101908]
gi|403198668|dbj|GAB86386.1| seryl-tRNA synthetase [Gordonia rubripertincta NBRC 101908]
Length = 419
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 116/197 (58%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 276
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE F+ P D E+ ++ ++ A + + YRV+++ G L +A++K D E
Sbjct: 277 FDKVEGFIYCKPEDAEAEHQ--RLLGWEKDMLAAIDVPYRVIDVAGGDLGSSASRKFDCE 334
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETH 190
AW P +REL S SNC +Q+RRL +RY K A ATTR + AILE H
Sbjct: 335 AWVPTQNTYRELTSTSNCTTFQARRLSIRYRDENGKPQTAATLNGTLATTRWLVAILENH 394
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V++P L KFV
Sbjct: 395 QQPDGSVKLPPELAKFV 411
Score = 119 bits (299), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ ++ ++ A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEGFIYCKPEDAEAEHQ--RLLGWEKDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 325 SSASRKFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V++P L KFV
Sbjct: 381 LATTRWLVAILENHQQPDGSVKLPPELAKFV 411
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREA 261
>gi|257054210|ref|YP_003132042.1| seryl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
gi|256584082|gb|ACU95215.1| seryl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
Length = 421
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 119/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H D L ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVSLAGYHADEILDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ P + E+ ++++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 280 VEMFIFCRPSEAEAEH--EKLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWI 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P A+REL S SNC YQ+R+L VRY + A ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTYQARKLSVRYRDEDGRPQHAATLNGTLATTRWIVAILENHQQP 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ ++ F+
Sbjct: 398 DGSVRVPEAMQPFL 411
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P + E+ ++++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFIFCRPSEAEAEH--EKLLAWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC YQ+R+L VRY + + + + LN T
Sbjct: 325 TSAARKYDCEAWIPTQQAYRELTSTSNCTTYQARKLSVRY---RDEDGRPQHAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P+ ++ F+
Sbjct: 381 LATTRWIVAILENHQQPDGSVRVPEAMQPFL 411
Score = 43.9 bits (102), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H D L ++ P+RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVSLAGYHADEILDLSNGPLRYAGWSSCFRREA 261
>gi|23308986|ref|NP_602083.2| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|145296881|ref|YP_001139702.1| seryl-tRNA synthetase [Corynebacterium glutamicum R]
gi|161486716|ref|YP_227132.2| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|417971826|ref|ZP_12612744.1| seryl-tRNA synthetase [Corynebacterium glutamicum S9114]
gi|30173172|sp|Q8NLP6.1|SYS_CORGL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|21325666|dbj|BAC00287.1| Seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|140846801|dbj|BAF55800.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344043912|gb|EGV39598.1| seryl-tRNA synthetase [Corynebacterium glutamicum S9114]
gi|385144974|emb|CCH26013.1| seryl-tRNA synthetase [Corynebacterium glutamicum K051]
Length = 422
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + P++Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDMYLVGTSEVALAGYHKDEIIDLNEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E + +++ +E A + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKVEMFVYCKPEDAED--VHQQLLGMEKEMLAAIEVPYRVIDVAGGDLGASAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K +I AT ATTR + AILE +Q
Sbjct: 335 WVPTQDTYRELTSTSNCTTFQARRLQTRYRDENGKPQIAATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVVVPEALRPFV 410
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E +++ +E A + + YRV+++ G L
Sbjct: 266 DTRGILRVHQFDKVEMFVYCKPEDAEDVHQ--QLLGMEKEMLAAIEVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 ASAARKFDTEAWVPTQDTYRELTSTSNCTTFQARRLQTRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVVVPEALRPFV 410
Score = 44.3 bits (103), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 493 DEAMIQNEKDLIATEKERNNALR----------EVIGKGEKVGDSAPE--KDELDDKYLI 540
D AM+Q ++A +K R E++ +GD + E E DD YL+
Sbjct: 165 DGAMLQLGMLMLAAQKAREAGFSMMIPPVLVRPEIMAGTGFLGDHSEEIYYLERDDMYLV 224
Query: 541 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
TSE + H+D + P++Y G S+CFR+E
Sbjct: 225 GTSEVALAGYHKDEIIDLNEGPVKYAGWSSCFRREA 260
>gi|296119113|ref|ZP_06837685.1| serine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
gi|295967948|gb|EFG81201.1| serine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
Length = 419
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLSEGPIQYAGWSSCFRREAGSHGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D E + +++ E + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKVEMFTYCKPEDAEKQHL--QLLSMEREMLDAMNLHYRVIDVAGGDLGASAARKYDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K +I AT ATTR + AILE +Q
Sbjct: 335 WVPTQGTYRELTSTSNCTTFQARRLQTRYRDENGKTQIAATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V IP+ LR +
Sbjct: 395 QADGSVVIPEALRPMM 410
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D E K +++ E + + YRV+++ G L
Sbjct: 266 DTRGILRVHQFDKVEMFTYCKPEDAE--KQHLQLLSMEREMLDAMNLHYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 ASAARKYDTEAWVPTQGTYRELTSTSNCTTFQARRLQTRY---RDENGKTQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V IP+ LR +
Sbjct: 380 LATTRWLVAILENNQQADGSVVIPEALRPMM 410
Score = 44.3 bits (103), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLSEGPIQYAGWSSCFRREA 260
>gi|41327072|emb|CAF20916.1| SERYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
Length = 432
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + P++Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 227 ERDDMYLVGTSEVALAGYHKDEIIDLNEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQF 286
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E + +++ +E A + + YRV+++ G L +AA+K D EA
Sbjct: 287 DKVEMFVYCKPEDAED--VHQQLLGMEKEMLAAIEVPYRVIDVAGGDLGASAARKFDTEA 344
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K +I AT ATTR + AILE +Q
Sbjct: 345 WVPTQDTYRELTSTSNCTTFQARRLQTRYRDENGKPQIAATLNGTLATTRWLVAILENNQ 404
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 405 QADGSVVVPEALRPFV 420
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E +++ +E A + + YRV+++ G L
Sbjct: 276 DTRGILRVHQFDKVEMFVYCKPEDAEDVHQ--QLLGMEKEMLAAIEVPYRVIDVAGGDLG 333
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 334 ASAARKFDTEAWVPTQDTYRELTSTSNCTTFQARRLQTRY---RDENGKPQIAATLNGT- 389
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 390 LATTRWLVAILENNQQADGSVVVPEALRPFV 420
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 493 DEAMIQNEKDLIATEKERNNALR----------EVIGKGEKVGDSAPE--KDELDDKYLI 540
D AM+Q ++A +K R E++ +GD + E E DD YL+
Sbjct: 175 DGAMLQLGMLMLAAQKAREAGFSMMIPPVLVRPEIMAGTGFLGDHSEEIYYLERDDMYLV 234
Query: 541 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
TSE + H+D + P++Y G S+CFR+E
Sbjct: 235 GTSEVALAGYHKDEIIDLNEGPVKYAGWSSCFRREA 270
>gi|159041457|ref|YP_001540709.1| seryl-tRNA synthetase [Caldivirga maquilingensis IC-167]
gi|157920292|gb|ABW01719.1| seryl-tRNA synthetase [Caldivirga maquilingensis IC-167]
Length = 474
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 9/194 (4%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YLI T+E P+ A++R S L E LPI G S +R+E G+ RD +GIFRVHQF KVEQ
Sbjct: 253 YLIGTAEHPLAALYRGSELLEKDLPILLAGFSPSYRKEAGAGNRDLKGIFRVHQFYKVEQ 312
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F T P D SW ++++ N + ++ L + +RVV + ++ AAK+ DLEAW P
Sbjct: 313 FAFTLPEDSWSWH--EKLLGNLIDIWSSLELPFRVVLVCPREMSRTAAKQYDLEAWMPAQ 370
Query: 142 GAFRELVSCSNCLDYQSRRL---LVRYGQTKQKIY---ATACATTRVICAILETHQTETG 195
G FRE+ SCSN D+QS RL ++R G ++ ++ +TA A R I AILE +Q E G
Sbjct: 371 GMFREMASCSNVTDWQSYRLGIRVIRKGMRREYVHTLNSTAIAVERTITAILENNQEEDG 430
Query: 196 -VRIPDCLRKFVPA 208
VRIP L K++ A
Sbjct: 431 TVRIPKVLNKYLEA 444
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 94/153 (61%), Gaps = 6/153 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQF T P D SW ++++ N + ++ L + +RVV + ++
Sbjct: 297 DLKGIFRVHQFYKVEQFAFTLPEDSWSWH--EKLLGNLIDIWSSLELPFRVVLVCPREMS 354
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK+ DLEAW P G FRE+ SCSN +QS RL +R + + E+VH LN+TA
Sbjct: 355 RTAAKQYDLEAWMPAQGMFREMASCSNVTDWQSYRLGIR---VIRKGMRREYVHTLNSTA 411
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
A R I AILE +Q E G VRIP L K++ A
Sbjct: 412 IAVERTITAILENNQEEDGTVRIPKVLNKYLEA 444
Score = 43.1 bits (100), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
YLI T+E P+ A++R S L E LPI G S +R+E AG
Sbjct: 253 YLIGTAEHPLAALYRGSELLEKDLPILLAGFSPSYRKEAGAG 294
>gi|418246070|ref|ZP_12872467.1| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 14067]
gi|354509615|gb|EHE82547.1| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 14067]
Length = 422
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + P++Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDMYLVGTSEVALAGYHKDEIIDLNEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E + +++ +E A + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKVEMFVYCKPEDAED--VHQQLLGMEKEMLAAIEVPYRVIDVAGGDLGASAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K +I AT ATTR + AILE +Q
Sbjct: 335 WVPTQDTYRELTSTSNCTTFQARRLQTRYRDENGKPQIAATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVVVPEALRPFV 410
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E +++ +E A + + YRV+++ G L
Sbjct: 266 DTRGILRVHQFDKVEMFVYCKPEDAEDVHQ--QLLGMEKEMLAAIEVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 ASAARKFDTEAWVPTQDTYRELTSTSNCTTFQARRLQTRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVVVPEALRPFV 410
Score = 44.3 bits (103), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 493 DEAMIQNEKDLIATEKERNNALR----------EVIGKGEKVGDSAPE--KDELDDKYLI 540
D AM+Q ++A +K R E++ +GD + E E DD YL+
Sbjct: 165 DGAMLQLGMLMLAAQKAREAGFSMMIPPVLVRPEIMAGTGFLGDHSEEIYYLERDDMYLV 224
Query: 541 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
TSE + H+D + P++Y G S+CFR+E
Sbjct: 225 GTSEVALAGYHKDEIIDLNEGPVKYAGWSSCFRREA 260
>gi|409356574|ref|ZP_11234961.1| seryl-tRNA ligase [Dietzia alimentaria 72]
Length = 420
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 118/198 (59%), Gaps = 8/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YL+ TSE + H+ L + P RY G S+CFR+E GSHG+DTRGI RVH
Sbjct: 216 KLEADDLYLVGTSEVALAGYHQGEILDLSDGPKRYCGWSSCFRREAGSHGKDTRGIIRVH 275
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+KVE F P D + ++ +E +G+ +RV++I G L +AA+K D
Sbjct: 276 QFDKVEMFSWCKPEDAREEHL--RLLSFEKEMLQAMGLPFRVIDIAGGDLGSSAARKYDC 333
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILET 189
EAW P A+REL S SNC +Q+RRL VRY + + +I AT ATTR + AILE
Sbjct: 334 EAWVPTQNAYRELTSTSNCTTFQARRLGVRYRDDEGRTQIAATLNGTLATTRWLVAILEN 393
Query: 190 HQTETG-VRIPDCLRKFV 206
HQ G V +P+ LR FV
Sbjct: 394 HQQADGSVVVPEALRPFV 411
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 99/203 (48%), Gaps = 52/203 (25%)
Query: 251 QVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLDTRGIFRV 310
+ GSHG+DTRGI RVHQF+KVE F P D EE R+
Sbjct: 260 EAGSHGKDTRGIIRVHQFDKVEMFSWCKPED------------AREEH---------LRL 298
Query: 311 HQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 370
FEK EM+Q +G+ +RV++I G L +AA+K D
Sbjct: 299 LSFEK-------------------EMLQA-------MGLPFRVIDIAGGDLGSSAARKYD 332
Query: 371 LEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVIC 430
EAW P A+REL S SNC +Q+RRL VRY + + + LN T ATTR +
Sbjct: 333 CEAWVPTQNAYRELTSTSNCTTFQARRLGVRY---RDDEGRTQIAATLNGT-LATTRWLV 388
Query: 431 AILETHQTETG-VRIPDCLRKFV 452
AILE HQ G V +P+ LR FV
Sbjct: 389 AILENHQQADGSVVVPEALRPFV 411
Score = 40.8 bits (94), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E DD YL+ TSE + H+ L + P RY G S+CFR+E
Sbjct: 216 KLEADDLYLVGTSEVALAGYHQGEILDLSDGPKRYCGWSSCFRREA 261
>gi|152993537|ref|YP_001359258.1| seryl-tRNA synthetase [Sulfurovum sp. NBC37-1]
gi|166223301|sp|A6QBP2.1|SYS_SULNB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|151425398|dbj|BAF72901.1| seryl-tRNA synthetase [Sulfurovum sp. NBC37-1]
Length = 414
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 119/198 (60%), Gaps = 8/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ ++ D L E LP+ G + CFR+E GS GRDTRG+ R H
Sbjct: 219 KIEDEDLYLIPTAEVPLTNMYHDEILAEIDLPVLMTGYTPCFRKEAGSAGRDTRGMIRQH 278
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+KVE + P D S ++ D M+QN+ + LG+ +RVV + G L +AAK +DL
Sbjct: 279 QFDKVEMVAIAHP--DNSDEVFDMMVQNASDILTALGLPHRVVELCGGDLGFSAAKTIDL 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-----IYATACATTRVICAILET 189
E W PG +RE+ S SN D+Q+RR +R+ K+ + +A A R + AI+E
Sbjct: 337 EVWLPGQNKYREISSISNTRDFQARRAKIRFKDGKKNRLVHTLNGSALAVGRTLIAIMEN 396
Query: 190 HQTETG-VRIPDCLRKFV 206
+Q E G + IP+ L+K++
Sbjct: 397 YQNEDGTIEIPEVLKKYM 414
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 7/154 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF+KVE + P D S + D M+QN+ + LG+ +RVV + G
Sbjct: 267 AGRDTRGMIRQHQFDKVEMVAIAHP--DNSDEVFDMMVQNASDILTALGLPHRVVELCGG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SN +Q+RR +R+ KK VH LN
Sbjct: 325 DLGFSAAKTIDLEVWLPGQNKYREISSISNTRDFQARRAKIRFKDGKKN----RLVHTLN 380
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+A A R + AI+E +Q E G + IP+ L+K++
Sbjct: 381 GSALAVGRTLIAIMENYQNEDGTIEIPEVLKKYM 414
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLI T+E P+ ++ D L E LP+ G + CFR+E + GM R +
Sbjct: 219 KIEDEDLYLIPTAEVPLTNMYHDEILAEIDLPVLMTGYTPCFRKEAGSAGRDTRGMIRQH 278
>gi|302531546|ref|ZP_07283888.1| seryl-tRNA synthetase [Streptomyces sp. AA4]
gi|302440441|gb|EFL12257.1| seryl-tRNA synthetase [Streptomyces sp. AA4]
Length = 422
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 115/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L ++ P RY G S+C+R+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEILDLSAGPRRYAGWSSCYRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P D E+ + ++ E+ A + + YRV++ +G L +A +K D EAW
Sbjct: 280 VEMFVFAKPEDAEAEH--ERLLGWEEDMLAAIEVPYRVIDTATGDLGTSAYRKYDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL VRY K A ATTR I AI+E HQ
Sbjct: 338 PTQETYRELTSTSNCTTFQARRLSVRYRDDNGKPQTAATLNGTLATTRWIVAIVENHQQP 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P LR F+
Sbjct: 398 DGSVRVPVALRPFL 411
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 7/158 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ + ++ E+ A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVFAKPEDAEAEH--ERLLGWEEDMLAAIEVPYRVIDTATGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 TSAYRKYDCEAWVPTQETYRELTSTSNCTTFQARRLSVRY---RDDNGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
ATTR I AI+E HQ G VR+P LR F+ + V E
Sbjct: 381 LATTRWIVAIVENHQQPDGSVRVPVALRPFLGGLEVLE 418
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L ++ P RY G S+C+R+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEILDLSAGPRRYAGWSSCYRREA 261
>gi|301063988|ref|ZP_07204453.1| serine--tRNA ligase [delta proteobacterium NaphS2]
gi|300441899|gb|EFK06199.1| serine--tRNA ligase [delta proteobacterium NaphS2]
Length = 428
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 120/198 (60%), Gaps = 10/198 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D YLI T+E P+ +HR+ L E LP Y+ + CFR E GS+G+DTRG+ R HQF KV
Sbjct: 224 DLYLIPTAEVPVTNMHREEVLQEDDLPAAYVAYTPCFRSEAGSYGKDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E + P D S+ L+++ QN+EE L + YRVV + +G + +AAK DLE W P
Sbjct: 284 ELVKFSKPED--SYHELEKLTQNAEEILRRLELPYRVVTLCTGDIGFSAAKTYDLEVWLP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIYAT----ACATTRVICAILETHQT 192
G G +RE+ SCSN +++Q+RR +R+ G++ ++ T A R + AILE +Q
Sbjct: 342 GQGLYREISSCSNFVEFQARRANIRFKRKGKSGNELVHTLNGSGLAVGRTVVAILENYQR 401
Query: 193 ETG-VRIPDCLRKFVPAV 209
E G V IP+ LR F+ +
Sbjct: 402 EDGSVEIPEALRPFMGGI 419
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 5/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF KVE + P D S+ L+++ QN+EE L + YRVV + +G +
Sbjct: 270 DTRGLIRQHQFNKVELVKFSKPED--SYHELEKLTQNAEEILRRLELPYRVVTLCTGDIG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK DLE W PG G +RE+ SCSN + +Q+RR +R+ + K E VH LN +
Sbjct: 328 FSAAKTYDLEVWLPGQGLYREISSCSNFVEFQARRANIRFKRKGKSGN--ELVHTLNGSG 385
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
A R + AILE +Q E G V IP+ LR F+ +
Sbjct: 386 LAVGRTVVAILENYQREDGSVEIPEALRPFMGGI 419
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D YLI T+E P+ +HR+ L E LP Y+ + CFR E
Sbjct: 224 DLYLIPTAEVPVTNMHREEVLQEDDLPAAYVAYTPCFRSEA 264
>gi|444434107|ref|ZP_21229232.1| serine--tRNA ligase [Gordonia soli NBRC 108243]
gi|443885034|dbj|GAC70953.1| serine--tRNA ligase [Gordonia soli NBRC 108243]
Length = 418
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D + + P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EEDDLYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D E+ ++ +E + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKIEGFVYCRPEDAEAEHQ--RLLGWEKEMLGAIDVPYRVIDVAGGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL +RY K A ATTR I AILE HQ
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLSIRYRDENGKPQTAATLNGTLATTRWIVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L +FV
Sbjct: 395 QPDGSVRLPAELARFV 410
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D E+ ++ +E + + YRV+++ G L
Sbjct: 266 DTRGIIRVHQFDKIEGFVYCRPEDAEAEHQ--RLLGWEKEMLGAIDVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDENGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P L +FV
Sbjct: 380 LATTRWIVAILENHQQPDGSVRLPAELARFV 410
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 516 EVIGKGEKVGDSAPEKDEL--DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
EV+G +G A E L DD YL+ TSE P+ H D + + P RY G S+CFR
Sbjct: 198 EVMGGTGFLGSHAAEVYHLEEDDLYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSSCFR 257
Query: 574 QEC 576
+E
Sbjct: 258 REA 260
>gi|118469581|ref|YP_890626.1| seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|399990615|ref|YP_006570966.1| seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|441217139|ref|ZP_20977322.1| serine--tRNA ligase [Mycobacterium smegmatis MKD8]
gi|166222747|sp|A0R638.1|SYS_MYCS2 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118170868|gb|ABK71764.1| seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|399235178|gb|AFP42671.1| Seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|440624193|gb|ELQ86060.1| serine--tRNA ligase [Mycobacterium smegmatis MKD8]
Length = 417
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L ++ P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDMYLVGTSEVPLAGYHADEILDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F+ P D E+ ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFIYCKPEDAEAEHQ--RLLGWQREMLAAIEVPYRVIDVAAGDLGSSAARKYDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WVPTQQTYRELTSTSNCTTFQARRLSTRYRDDNGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L +V
Sbjct: 395 QPDGSVRVPAALVPYV 410
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCKPEDAEAEH--QRLLGWQREMLAAIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKYDCEAWVPTQQTYRELTSTSNCTTFQARRLSTRY---RDDNGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L +V
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPAALVPYV 410
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L ++ P RY G S+CFR+E
Sbjct: 217 EADDMYLVGTSEVPLAGYHADEILDLSAGPRRYAGWSSCFRREA 260
>gi|451947471|ref|YP_007468066.1| seryl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
gi|451906819|gb|AGF78413.1| seryl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
Length = 425
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 119/194 (61%), Gaps = 10/194 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D YLI T+E P+ ++RD L E LP+++ + CFR E GS+GRDT+G+ R HQF+KV
Sbjct: 229 DLYLIPTAEVPVTNIYRDETLDENQLPVKFTAYTPCFRSEAGSYGRDTKGLIRQHQFDKV 288
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T+P + S + L+ ++ ++EE LG+ YRVV + SG L ++ K D+E W P
Sbjct: 289 ELVKFTTP--ETSAQELESLLADAEEVLQLLGLHYRVVTLCSGDLGFSSTKTYDIEVWLP 346
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIYAT----ACATTRVICAILETHQT 192
G +RE+ SCSN LD+Q+RR +RY GQ K K+ T A R + AILE +Q
Sbjct: 347 GQNTYREISSCSNFLDFQARRGGIRYRPNGQKKSKLVHTLNGSGLAVGRTLLAILENYQQ 406
Query: 193 ETG-VRIPDCLRKF 205
E G V +PD L+ +
Sbjct: 407 EDGTVIVPDVLKPY 420
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G+ R HQF+KVE T+P + S + L+ ++ ++EE LG+ YRVV + SG L
Sbjct: 275 DTKGLIRQHQFDKVELVKFTTP--ETSAQELESLLADAEEVLQLLGLHYRVVTLCSGDLG 332
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++ K D+E W PG +RE+ SCSN L +Q+RR +RY + K+ VH LN +
Sbjct: 333 FSSTKTYDIEVWLPGQNTYREISSCSNFLDFQARRGGIRYRPNGQKKSKL--VHTLNGSG 390
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKF 451
A R + AILE +Q E G V +PD L+ +
Sbjct: 391 LAVGRTLLAILENYQQEDGTVIVPDVLKPY 420
Score = 43.9 bits (102), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D YLI T+E P+ ++RD L E LP+++ + CFR E
Sbjct: 229 DLYLIPTAEVPVTNIYRDETLDENQLPVKFTAYTPCFRSEA 269
>gi|383806792|ref|ZP_09962353.1| seryl-tRNA synthetase [Candidatus Aquiluna sp. IMCC13023]
gi|383299222|gb|EIC91836.1| seryl-tRNA synthetase [Candidatus Aquiluna sp. IMCC13023]
Length = 421
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 116/202 (57%), Gaps = 18/202 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL TSE + H L + + P+RY G STC+R+E GSHG+DTRGI RVHQF K
Sbjct: 220 DDLYLTGTSEVALAGYHSGEILDDLTTPMRYAGWSTCYRREAGSHGKDTRGILRVHQFNK 279
Query: 79 VEQFVLTSPHDDES--WKML---DEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
+E F P D E+ K+L ++M+Q E + YRV+++ +G L +AA+K D
Sbjct: 280 LEMFSYCKPEDAEAEHAKLLEWQEQMLQKCE-------LPYRVIDVAAGDLGSSAARKYD 332
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILE 188
+EAW P G +REL S SNC YQ+RRL RY K A ATTR + AILE
Sbjct: 333 IEAWVPTQGGYRELTSTSNCTTYQARRLNTRYRDQDGKPAVAATLNGTLATTRWLVAILE 392
Query: 189 THQTETG-VRIPDCLRKFVPAV 209
HQ G V IP LR ++ V
Sbjct: 393 NHQQADGSVLIPAALRGYLGGV 414
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF K+E F P D E+ ++++ E+ + YRV+++ +G L
Sbjct: 267 DTRGILRVHQFNKLEMFSYCKPEDAEAEHA--KLLEWQEQMLQKCELPYRVIDVAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D+EAW P G +REL S SNC YQ+RRL RY + + K LN T
Sbjct: 325 SSAARKYDIEAWVPTQGGYRELTSTSNCTTYQARRLNTRY---RDQDGKPAVAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR + AILE HQ G V IP LR ++ V
Sbjct: 381 LATTRWLVAILENHQQADGSVLIPAALRGYLGGV 414
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL TSE + H L + + P+RY G STC+R+E
Sbjct: 220 DDLYLTGTSEVALAGYHSGEILDDLTTPMRYAGWSTCYRREA 261
>gi|161485956|ref|NP_739334.2| seryl-tRNA synthetase [Corynebacterium efficiens YS-314]
gi|259505719|ref|ZP_05748621.1| serine--tRNA ligase [Corynebacterium efficiens YS-314]
gi|30173164|sp|Q8FLY5.2|SYS_COREF RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|259166692|gb|EEW51246.1| serine--tRNA ligase [Corynebacterium efficiens YS-314]
Length = 419
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 120/197 (60%), Gaps = 10/197 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + + P++Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDMYLVGTSEVALAGYHKDEIIDLNNGPVKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHD-DESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
+KVE FV P + +E + L EM ++ A + + YR++++ G L +AA+K D E
Sbjct: 277 DKVEMFVYCKPEEAEEQHRRLLEM---EKDMLAAVEVPYRIIDVAGGDLGASAARKFDTE 333
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETH 190
AW P G +REL S SNC +Q RRL RY K +I AT ATTR + AILE +
Sbjct: 334 AWVPTQGTYRELTSTSNCTTFQGRRLQTRYRDENGKPQIAATLNGTLATTRWLVAILENN 393
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V +P+ LR FV
Sbjct: 394 QQADGSVIVPEALRPFV 410
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 9/152 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHD-DESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
DTRGI RVHQF+KVE FV P + +E + L EM ++ A + + YR++++ G L
Sbjct: 266 DTRGILRVHQFDKVEMFVYCKPEEAEEQHRRLLEM---EKDMLAAVEVPYRIIDVAGGDL 322
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
+AA+K D EAW P G +REL S SNC +Q RRL RY + N K + LN T
Sbjct: 323 GASAARKFDTEAWVPTQGTYRELTSTSNCTTFQGRRLQTRY---RDENGKPQIAATLNGT 379
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 -LATTRWLVAILENNQQADGSVIVPEALRPFV 410
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + + P++Y G S+CFR+E
Sbjct: 217 ERDDMYLVGTSEVALAGYHKDEIIDLNNGPVKYAGWSSCFRREA 260
>gi|441514857|ref|ZP_20996670.1| seryl-tRNA synthetase [Gordonia amicalis NBRC 100051]
gi|441450340|dbj|GAC54631.1| seryl-tRNA synthetase [Gordonia amicalis NBRC 100051]
Length = 419
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 119/197 (60%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 276
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE F+ P D E+ ++ ++ A + + YRV+++ G L +A++K D E
Sbjct: 277 FDKVEGFIYCKPEDAEAEHR--RLLGWEKDMLAAIDVPYRVIDVAGGDLGSSASRKFDCE 334
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETH 190
AW P +REL S SNC +Q+RRL +RY K +I AT ATTR + AILE H
Sbjct: 335 AWVPTQNTYRELTSTSNCTTFQARRLSIRYRDENGKPQIAATLNGTLATTRWLVAILENH 394
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V++P L K+V
Sbjct: 395 QQPDGSVKLPAELAKYV 411
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ ++ ++ A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEGFIYCKPEDAEAEHR--RLLGWEKDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 325 SSASRKFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDENGKPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V++P L K+V
Sbjct: 381 LATTRWLVAILENHQQPDGSVKLPAELAKYV 411
Score = 47.4 bits (111), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
D+ DD YL+ TSE P+ H D L + P RY G STCFR+E
Sbjct: 217 DKDDDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSTCFRREA 261
>gi|284042611|ref|YP_003392951.1| seryl-tRNA synthetase [Conexibacter woesei DSM 14684]
gi|283946832|gb|ADB49576.1| seryl-tRNA synthetase [Conexibacter woesei DSM 14684]
Length = 411
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 115/200 (57%), Gaps = 11/200 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL TSE + ++H+ L E LP RY G S CFR+E G+ GRDTRGIFRVHQF+K
Sbjct: 209 DDLYLAGTSEVALASLHQGEILAEEELPRRYAGFSPCFRREAGAAGRDTRGIFRVHQFDK 268
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F +P ++S + ++ E +L I YRVVNI L +AAKK D EAW
Sbjct: 269 VEMFAFVTP--EQSAAEHERILGIEESILQELEIPYRVVNIAVDDLGASAAKKYDNEAWL 326
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQ 191
PG G +REL S SN D+Q+RRL +RY T K + TA A R I A+LE Q
Sbjct: 327 PGQGRYRELTSASNTTDFQARRLDIRYRPTDAKKPVTLHTLNGTAVAVGRTIIALLENGQ 386
Query: 192 TETG-VRIPDCL-RKFVPAV 209
+ G + +P L PAV
Sbjct: 387 QDDGSIALPRVLVEAGAPAV 406
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 90/158 (56%), Gaps = 6/158 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGIFRVHQF+KVE F +P ++S + ++ E +L I YRVVNI
Sbjct: 253 AGRDTRGIFRVHQFDKVEMFAFVTP--EQSAAEHERILGIEESILQELEIPYRVVNIAVD 310
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAKK D EAW PG G +REL S SN +Q+RRL +RY T +K +H LN
Sbjct: 311 DLGASAAKKYDNEAWLPGQGRYRELTSASNTTDFQARRLDIRYRPTDA--KKPVTLHTLN 368
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCL-RKFVPAV 455
TA A R I A+LE Q + G + +P L PAV
Sbjct: 369 GTAVAVGRTIIALLENGQQDDGSIALPRVLVEAGAPAV 406
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGM--CRTYFHV 587
DD YL TSE + ++H+ L E LP RY G S CFR+E A R F V
Sbjct: 209 DDLYLAGTSEVALASLHQGEILAEEELPRRYAGFSPCFRREAGAAGRDTRGIFRV 263
>gi|161986627|ref|YP_249893.2| seryl-tRNA synthetase [Corynebacterium jeikeium K411]
gi|260578616|ref|ZP_05846525.1| serine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
gi|258603244|gb|EEW16512.1| serine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
Length = 424
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H + + ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 222 EEDDMYLVGTSEVALAGYHSEEIIDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P +E+ ++ E++ E + + YRV+++ G L +AA+K D EA
Sbjct: 282 DKVEMFVYCKP--EEATEVHQELLAMEREMLGAIEVPYRVIDVAGGDLGSSAARKFDTEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q RRL RY K A ATTR + AILE HQ
Sbjct: 340 WVPTQQTYRELTSTSNCTTFQGRRLKTRYRDADGKAQTAATLNGTLATTRWLVAILENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
G V +P LR FV
Sbjct: 400 QADGSVVVPKALRPFV 415
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P +E+ + E++ E + + YRV+++ G L
Sbjct: 271 DTRGIIRVHQFDKVEMFVYCKP--EEATEVHQELLAMEREMLGAIEVPYRVIDVAGGDLG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q RRL RY + + K + LN T
Sbjct: 329 SSAARKFDTEAWVPTQQTYRELTSTSNCTTFQGRRLKTRY---RDADGKAQTAATLNGT- 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P LR FV
Sbjct: 385 LATTRWLVAILENHQQADGSVVVPKALRPFV 415
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H + + ++ P+RY G S+CFR+E
Sbjct: 222 EEDDMYLVGTSEVALAGYHSEEIIDLSNGPLRYAGWSSCFRREA 265
>gi|312137683|ref|YP_004005019.1| seryl-tRNA ligase sers [Rhodococcus equi 103S]
gi|311887022|emb|CBH46331.1| seryl-tRNA ligase SerS [Rhodococcus equi 103S]
Length = 419
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 114/203 (56%), Gaps = 26/203 (12%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L ++ P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLSNGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDE-------SWK--MLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
VE F P D + +W+ MLD M G+ YRV+++ G L +AA
Sbjct: 280 VEMFTYCKPEDADAEHQRLLAWERDMLDAM-----------GLPYRVIDVAGGDLGSSAA 328
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVIC 184
+K D EAW P A+REL S SNC YQ+RRL VRY K A ATTR +
Sbjct: 329 RKFDCEAWVPTQQAYRELTSTSNCTTYQARRLSVRYRDENGKPQTAATLNGTLATTRWLV 388
Query: 185 AILETHQTETG-VRIPDCLRKFV 206
AILE HQ G VR+P L FV
Sbjct: 389 AILENHQQADGSVRVPAALVPFV 411
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ ++ + +G+ YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFTYCKPEDADAEH--QRLLAWERDMLDAMGLPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC YQ+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQQAYRELTSTSNCTTYQARRLSVRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 381 LATTRWLVAILENHQQADGSVRVPAALVPFV 411
Score = 43.1 bits (100), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H L ++ P RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLSNGPKRYAGWSSCFRREA 261
>gi|68262787|emb|CAI36275.1| serS [Corynebacterium jeikeium K411]
Length = 444
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H + + ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 242 EEDDMYLVGTSEVALAGYHSEEIIDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 301
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P +E+ ++ E++ E + + YRV+++ G L +AA+K D EA
Sbjct: 302 DKVEMFVYCKP--EEATEVHQELLAMEREMLGAIEVPYRVIDVAGGDLGSSAARKFDTEA 359
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q RRL RY K A ATTR + AILE HQ
Sbjct: 360 WVPTQQTYRELTSTSNCTTFQGRRLKTRYRDADGKAQTAATLNGTLATTRWLVAILENHQ 419
Query: 192 TETG-VRIPDCLRKFV 206
G V +P LR FV
Sbjct: 420 QADGSVVVPKALRPFV 435
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P +E+ + E++ E + + YRV+++ G L
Sbjct: 291 DTRGIIRVHQFDKVEMFVYCKP--EEATEVHQELLAMEREMLGAIEVPYRVIDVAGGDLG 348
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q RRL RY + + K + LN T
Sbjct: 349 SSAARKFDTEAWVPTQQTYRELTSTSNCTTFQGRRLKTRY---RDADGKAQTAATLNGT- 404
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P LR FV
Sbjct: 405 LATTRWLVAILENHQQADGSVVVPKALRPFV 435
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H + + ++ P+RY G S+CFR+E
Sbjct: 242 EEDDMYLVGTSEVALAGYHSEEIIDLSNGPLRYAGWSSCFRREA 285
>gi|222823544|ref|YP_002575118.1| seryl-tRNA synthetase [Campylobacter lari RM2100]
gi|254783014|sp|B9KFN2.1|SYS_CAMLR RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|222538766|gb|ACM63867.1| seryl-tRNA synthetase [Campylobacter lari RM2100]
Length = 411
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLI+TSE P+ ++ + L + LP++ S CFRQE GS G+DTRGI R H
Sbjct: 215 KVENDDLYLISTSEIPVTNLYSNEILTQEELPLKMTCYSACFRQEAGSAGKDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE + P D+S M +EM+ + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSICKP--DQSELMFEEMLNCASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P +RE+ S SNC D+Q+RR +R+ K K + ++ A R + AI+E
Sbjct: 333 EVWLPSQNKYREISSVSNCKDFQARRAKIRFKNDKGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G +RIPD LRK+
Sbjct: 393 NYQEKDGNIRIPDVLRKY 410
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 91/150 (60%), Gaps = 6/150 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI R HQFEKVE + P D+S +EM+ + + + LG+A+R + + +G L
Sbjct: 266 DTRGIIRQHQFEKVELVSICKP--DQSELMFEEMLNCASDLLSSLGLAHRHLMLCTGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK +DLE W P +RE+ S SNC +Q+RR +R+ K N E VH LN ++
Sbjct: 324 FSAAKTVDLEVWLPSQNKYREISSVSNCKDFQARRAKIRFKNDKGKN---ELVHTLNGSS 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKF 451
A R + AI+E +Q + G +RIPD LRK+
Sbjct: 381 LAVGRTLVAIMENYQEKDGNIRIPDVLRKY 410
Score = 43.1 bits (100), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E DD YLI+TSE P+ ++ + L + LP++ S CFRQE +
Sbjct: 215 KVENDDLYLISTSEIPVTNLYSNEILTQEELPLKMTCYSACFRQEAGSA 263
>gi|23494568|dbj|BAC19534.1| putative seryl-tRNA synthetase [Corynebacterium efficiens YS-314]
Length = 448
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 120/197 (60%), Gaps = 10/197 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + + P++Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 246 ERDDMYLVGTSEVALAGYHKDEIIDLNNGPVKYAGWSSCFRREAGSYGKDTRGILRVHQF 305
Query: 77 EKVEQFVLTSPHD-DESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
+KVE FV P + +E + L EM ++ A + + YR++++ G L +AA+K D E
Sbjct: 306 DKVEMFVYCKPEEAEEQHRRLLEM---EKDMLAAVEVPYRIIDVAGGDLGASAARKFDTE 362
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETH 190
AW P G +REL S SNC +Q RRL RY K +I AT ATTR + AILE +
Sbjct: 363 AWVPTQGTYRELTSTSNCTTFQGRRLQTRYRDENGKPQIAATLNGTLATTRWLVAILENN 422
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V +P+ LR FV
Sbjct: 423 QQADGSVIVPEALRPFV 439
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 9/152 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHD-DESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
DTRGI RVHQF+KVE FV P + +E + L EM ++ A + + YR++++ G L
Sbjct: 295 DTRGILRVHQFDKVEMFVYCKPEEAEEQHRRLLEM---EKDMLAAVEVPYRIIDVAGGDL 351
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
+AA+K D EAW P G +REL S SNC +Q RRL RY + N K + LN T
Sbjct: 352 GASAARKFDTEAWVPTQGTYRELTSTSNCTTFQGRRLQTRY---RDENGKPQIAATLNGT 408
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 409 -LATTRWLVAILENNQQADGSVIVPEALRPFV 439
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD YL+ TSE + H+D + + P++Y G S+CFR+E +
Sbjct: 246 ERDDMYLVGTSEVALAGYHKDEIIDLNNGPVKYAGWSSCFRREAGS 291
>gi|118475748|ref|YP_892488.1| seryl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
gi|424821141|ref|ZP_18246179.1| Seryl-tRNA synthetase [Campylobacter fetus subsp. venerealis NCTC
10354]
gi|166201245|sp|A0RQK5.1|SYS_CAMFF RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118414974|gb|ABK83394.1| seryl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
gi|342327920|gb|EGU24404.1| Seryl-tRNA synthetase [Campylobacter fetus subsp. venerealis NCTC
10354]
Length = 414
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI TSE P+ ++ + +P +LPI+ S CFRQE GS GRDTRG+ R HQFEK
Sbjct: 223 EDLYLIPTSEVPVTNIYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE ++ P D S K+LDEM+ + + +LG+ +R + + S L AAK +DLE W
Sbjct: 283 VELVSISKPED--SAKILDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTIDLEVWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-----IYATACATTRVICAILETHQTE 193
PG G +RE+ S SN D+Q+RR +RY K+ + ++ A R + AI+E +Q
Sbjct: 341 PGQGKYREISSISNTRDFQARRAKIRYKDGKKNALVHTLNGSSLAVGRTLIAIMENYQNS 400
Query: 194 TG-VRIPDCLRKFV 206
G + IP+ L+K++
Sbjct: 401 DGSINIPEVLKKYM 414
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 7/154 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQFEKVE ++ P D S K LDEM+ + + +LG+ +R + + S
Sbjct: 267 AGRDTRGMIRQHQFEKVELVSISKPED--SAKILDEMVSCASDMLKELGLPHRHMMLCSA 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAK +DLE W PG G +RE+ S SN +Q+RR +RY KK VH LN
Sbjct: 325 DLGFGAAKTIDLEVWLPGQGKYREISSISNTRDFQARRAKIRYKDGKKN----ALVHTLN 380
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
++ A R + AI+E +Q G + IP+ L+K++
Sbjct: 381 GSSLAVGRTLIAIMENYQNSDGSINIPEVLKKYM 414
Score = 44.3 bits (103), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
+D YLI TSE P+ ++ + +P +LPI+ S CFRQE + GM R +
Sbjct: 223 EDLYLIPTSEVPVTNIYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQH 278
>gi|108801992|ref|YP_642189.1| seryl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119871144|ref|YP_941096.1| seryl-tRNA synthetase [Mycobacterium sp. KMS]
gi|123177925|sp|Q1B1V1.1|SYS_MYCSS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166222749|sp|A1UN98.1|SYS_MYCSK RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|108772411|gb|ABG11133.1| seryl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119697233|gb|ABL94306.1| seryl-tRNA synthetase [Mycobacterium sp. KMS]
Length = 417
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D + ++ P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ESDDMYLVGTSEVPLAGYHADEIIDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F+ P D + D ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFIYCKPEDAAAEH--DRLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKYDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WVPTQQTYRELTSTSNCTTFQARRLSTRYRDENGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 395 QPDGSVRVPAALVPFV 410
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D + D ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCKPEDAAAEH--DRLLGWQREMLALIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKYDCEAWVPTQQTYRELTSTSNCTTFQARRLSTRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPAALVPFV 410
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D + ++ P RY G S+CFR+E
Sbjct: 217 ESDDMYLVGTSEVPLAGYHADEIIDLSAGPRRYAGWSSCFRREA 260
>gi|410867606|ref|YP_006982217.1| Seryl-tRNA synthetase [Propionibacterium acidipropionici ATCC 4875]
gi|410824247|gb|AFV90862.1| Seryl-tRNA synthetase [Propionibacterium acidipropionici ATCC 4875]
Length = 421
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 116/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H + L +A LP RY+ S CFR+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSEEILDDAELPKRYVAFSPCFRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E W +++ EF L I Y+V+++ SG L +AA+K D AW
Sbjct: 283 VEMFVYCLPEEAEDWHA--KLLGFEREFIEALEIPYQVLDVASGDLGLSAARKYDCYAWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQNA 400
Query: 194 TG-VRIPDCLRKFV 206
G V IP LR ++
Sbjct: 401 DGSVTIPAALRPYL 414
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E W +++ EF L I Y+V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPEEAEDWHA--KLLGFEREFIEALEIPYQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D AW P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKYDCYAWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G V IP LR ++
Sbjct: 384 CAMTRIIIMLLENHQNADGSVTIPAALRPYL 414
Score = 47.0 bits (110), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H + L +A LP RY+ S CFR+E
Sbjct: 223 DDQYLVGTSEVALAAFHSEEILDDAELPKRYVAFSPCFRREA 264
>gi|379706368|ref|YP_005261573.1| seryl-tRNA synthetase [Nocardia cyriacigeorgica GUH-2]
gi|374843867|emb|CCF60929.1| seryl-tRNA synthetase [Nocardia cyriacigeorgica GUH-2]
Length = 420
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 116/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L + RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEILDLSGGAKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P D ++ ++ E A + + YR++++ +G L +AA+K D EAW
Sbjct: 280 VEMFVYCKPEDADAEHQ--RLLAWEREMLAAIEVPYRIIDVAAGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL VRY K +I AT ATTR I A+LE HQ
Sbjct: 338 PSQRTYRELTSTSNCTTFQARRLSVRYRDENGKPQIAATLNGTLATTRWIVALLENHQQA 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ L FV
Sbjct: 398 DGSVRVPEALVPFV 411
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D ++ ++ E A + + YR++++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVYCKPEDADAEH--QRLLAWEREMLAAIEVPYRIIDVAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPSQRTYRELTSTSNCTTFQARRLSVRY---RDENGKPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I A+LE HQ G VR+P+ L FV
Sbjct: 381 LATTRWIVALLENHQQADGSVRVPEALVPFV 411
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L + RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSDEILDLSGGAKRYAGWSSCFRREA 261
>gi|374608795|ref|ZP_09681593.1| seryl-tRNA synthetase [Mycobacterium tusciae JS617]
gi|373553381|gb|EHP79976.1| seryl-tRNA synthetase [Mycobacterium tusciae JS617]
Length = 418
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 113/196 (57%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H L + P RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 217 ETDDLYLVGTSEVALAGYHSGEILDLSDGPRRYAGWSSCFRREAGSHGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F+ P + E+ ++ E A + + YRV++I +G L +AA+K D EA
Sbjct: 277 DKVEGFIYCKPEEAEAEHQ--RLLGWEREMLAKIDVPYRVIDIAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL VRY K A ATTR + AILE HQ
Sbjct: 335 WVPTQQTYRELTSTSNCTTFQARRLAVRYRDENGKPQTAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ L FV
Sbjct: 395 QPDGSVRVPEALVGFV 410
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P + E+ ++ E A + + YRV++I +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCKPEEAEAEHQ--RLLGWEREMLAKIDVPYRVIDIAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLAVRY---RDENGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P+ L FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPEALVGFV 410
>gi|126437973|ref|YP_001073664.1| seryl-tRNA synthetase [Mycobacterium sp. JLS]
gi|166222748|sp|A3Q7P6.1|SYS_MYCSJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|126237773|gb|ABO01174.1| seryl-tRNA synthetase [Mycobacterium sp. JLS]
Length = 417
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D + ++ P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ESDDMYLVGTSEVPLAGYHADEIIDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F+ P D + D ++ E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFIYCKPEDAAAEH--DRLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKYDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 335 WVPTQQTYRELTSTSNCTTFQARRLSTRYRDENGKPQIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 395 QPDGSVRVPAALVPFV 410
Score = 119 bits (299), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D + D ++ E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCKPEDAAAEH--DRLLGWQREMLALIEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKYDCEAWVPTQQTYRELTSTSNCTTFQARRLSTRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPAALVPFV 410
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D + ++ P RY G S+CFR+E
Sbjct: 217 ESDDMYLVGTSEVPLAGYHADEIIDLSAGPRRYAGWSSCFRREA 260
>gi|406669189|ref|ZP_11076469.1| serine-tRNA ligase [Facklamia ignava CCUG 37419]
gi|405583986|gb|EKB57912.1| serine-tRNA ligase [Facklamia ignava CCUG 37419]
Length = 433
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 117/194 (60%), Gaps = 9/194 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LI T+E P+ + + +PE +LPIR +S FR E GS GRDTRG+ R+HQF KVE
Sbjct: 229 LIPTAEVPLTNYYSNEIIPEDALPIRLTALSPSFRSEAGSAGRDTRGLIRMHQFNKVELV 288
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
LT P +S++ L+ M QN+EE DLGI YR + + +G + +AAK D+EAW PG
Sbjct: 289 KLTHP--SQSYQELELMTQNAEEILQDLGIPYRTIVLCTGDMGFSAAKTYDIEAWIPGQD 346
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTKQKI------YATACATTRVICAILETHQTETG- 195
+RE+ SCSNC D+Q+RR +R+ +K+ + A R + A+LE +Q G
Sbjct: 347 RYREISSCSNCEDFQARRAKIRFRNEDKKVDYVHTLNGSGLAVGRTVVAVLENYQQADGS 406
Query: 196 VRIPDCLRKFVPAV 209
V+IPD L ++ +
Sbjct: 407 VKIPDVLVPYMGGI 420
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R+HQF KVE LT P +S++ L+ M QN+EE DLGI YR +
Sbjct: 264 SEAGSAGRDTRGLIRMHQFNKVELVKLTHP--SQSYQELELMTQNAEEILQDLGIPYRTI 321
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + +AAK D+EAW PG +RE+ SCSNC +Q+RR +R+ + ++K+++
Sbjct: 322 VLCTGDMGFSAAKTYDIEAWIPGQDRYREISSCSNCEDFQARRAKIRF---RNEDKKVDY 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
VH LN + A R + A+LE +Q G V+IPD L ++ +
Sbjct: 379 VHTLNGSGLAVGRTVVAVLENYQQADGSVKIPDVLVPYMGGI 420
>gi|423351510|ref|ZP_17329161.1| seryl-tRNA synthetase [Turicella otitidis ATCC 51513]
gi|404386477|gb|EJZ81635.1| seryl-tRNA synthetase [Turicella otitidis ATCC 51513]
Length = 435
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H D + ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 233 ERDDLYLVGTSEVALAGYHADEIIDLSNGPVRYAGWSSCFRREAGSYGKDTRGILRVHQF 292
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +E+ + +++ E A + + YRV+++ G L +AA+K D EA
Sbjct: 293 DKLEMFVYCRP--EEAAEQHQKLLDLEREMLAAVEVPYRVIDVAGGDLGASAARKFDTEA 350
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K ++ AT ATTR + AILE +Q
Sbjct: 351 WVPTQGTYRELTSTSNCTTFQARRLKTRYRDESGKPQVAATLNGTLATTRWLVAILENNQ 410
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 411 RADGSVVVPEALRPFV 426
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +E+ + +++ E A + + YRV+++ G L
Sbjct: 282 DTRGILRVHQFDKLEMFVYCRP--EEAAEQHQKLLDLEREMLAAVEVPYRVIDVAGGDLG 339
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 340 ASAARKFDTEAWVPTQGTYRELTSTSNCTTFQARRLKTRY---RDESGKPQVAATLNGT- 395
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 396 LATTRWLVAILENNQRADGSVVVPEALRPFV 426
Score = 44.7 bits (104), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H D + ++ P+RY G S+CFR+E
Sbjct: 233 ERDDLYLVGTSEVALAGYHADEIIDLSNGPVRYAGWSSCFRREA 276
>gi|333372863|ref|ZP_08464784.1| serine--tRNA ligase [Desmospora sp. 8437]
gi|332971217|gb|EGK10180.1| serine--tRNA ligase [Desmospora sp. 8437]
Length = 432
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 115/195 (58%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D YLI T+E P+ HR L A LP++Y G S FR E GS GRDTRG+ R HQF KV
Sbjct: 231 DYYLIPTAEVPVTNFHRGEILSAAELPVKYAGFSANFRSEAGSAGRDTRGLIRTHQFNKV 290
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E L P D S+ L+ ++Q++E LG+ YRV+ + + L AAKK DLE W P
Sbjct: 291 ELVKLVKPED--SYDELESLVQDAEMVLQQLGLPYRVLLMCTADLGFTAAKKYDLEVWLP 348
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQKIY---ATACATTRVICAILETHQT 192
SG +RE+ SCSN DYQ+RR +R+ G + ++ + A R + A+LE +Q
Sbjct: 349 SSGTYREISSCSNFEDYQARRANIRFRRDAGSKPEFVHTLNGSGLAIGRTVAALLEHYQQ 408
Query: 193 ETG-VRIPDCLRKFV 206
E G +RIP+ LR ++
Sbjct: 409 EDGSIRIPEVLRPYM 423
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE L P D S+ L+ ++Q++E LG+ YRV+
Sbjct: 269 SEAGSAGRDTRGLIRTHQFNKVELVKLVKPED--SYDELESLVQDAEMVLQQLGLPYRVL 326
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ + L AAKK DLE W P SG +RE+ SCSN YQ+RR +R+ + K EF
Sbjct: 327 LMCTADLGFTAAKKYDLEVWLPSSGTYREISSCSNFEDYQARRANIRF--RRDAGSKPEF 384
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH LN + A R + A+LE +Q E G +RIP+ LR ++
Sbjct: 385 VHTLNGSGLAIGRTVAALLEHYQQEDGSIRIPEVLRPYM 423
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
D YLI T+E P+ HR L A LP++Y G S FR E + G+ RT+
Sbjct: 231 DYYLIPTAEVPVTNFHRGEILSAAELPVKYAGFSANFRSEAGSAGRDTRGLIRTH 285
>gi|418048469|ref|ZP_12686556.1| Seryl-tRNA synthetase [Mycobacterium rhodesiae JS60]
gi|353189374|gb|EHB54884.1| Seryl-tRNA synthetase [Mycobacterium rhodesiae JS60]
Length = 417
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 118/200 (59%), Gaps = 8/200 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L + P+RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 219 DDLYLVGTSEVPLAGYHSDEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P DE+ ++ + + + YRV+++ +G L +AA+K D EAW
Sbjct: 279 VEGFVYCRP--DEAEAEHQRLLGWQRQMLELIDVPYRVIDVAAGDLGSSAARKFDCEAWV 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL RY K +I AT ATTR + AILE HQ
Sbjct: 337 PTQQAYRELTSTSNCTTFQARRLATRYRDENGKPQIAATLNGTLATTRWLVAILENHQQP 396
Query: 194 TG-VRIPDCLRKFVPAVYLN 212
G VR+P L +V A L
Sbjct: 397 DGSVRVPAALVPYVGAEVLQ 416
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 88/153 (57%), Gaps = 7/153 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P DE+ ++ + + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCRP--DEAEAEHQRLLGWQRQMLELIDVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQQAYRELTSTSNCTTFQARRLATRY---RDENGKPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
ATTR + AILE HQ G VR+P L +V A
Sbjct: 380 LATTRWLVAILENHQQPDGSVRVPAALVPYVGA 412
Score = 47.0 bits (110), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L + P+RY G S+CFR+E
Sbjct: 219 DDLYLVGTSEVPLAGYHSDEILDLSGGPLRYAGWSSCFRREA 260
>gi|315637975|ref|ZP_07893160.1| serine--tRNA ligase [Campylobacter upsaliensis JV21]
gi|315481823|gb|EFU72442.1| serine--tRNA ligase [Campylobacter upsaliensis JV21]
Length = 411
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI+TSE + + D L +LP++ S CFR+E GS GRDTRGI R H
Sbjct: 215 KVEEEDLYLISTSEIALTNLFNDEILNAENLPLKMTAYSACFRKEAGSAGRDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE +TSP ES + +EM + + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSITSPKQSES--VFNEMCECASDLLSSLGLAHRWMMLCTGDLGFSAAKTIDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W PG FRE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E
Sbjct: 333 EVWLPGQNQFREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G + IPD LRK+
Sbjct: 393 NYQDKNGKIAIPDVLRKY 410
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +TSP ES +EM + + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITSPKQSES--VFNEMCECASDLLSSLGLAHRWMMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG FRE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTIDLEVWLPGQNQFREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD LRK+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKNGKIAIPDVLRKY 410
>gi|326318495|ref|YP_004236167.1| seryl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323375331|gb|ADX47600.1| seryl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 439
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 121/210 (57%), Gaps = 12/210 (5%)
Query: 4 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSH 63
KG + G+ P+ L YLI TSE P+ RD +PEA LPIR + CFR E GS+
Sbjct: 228 KGGQDGEPVPDNAAL---YLIPTSEVPLTNFVRDQVVPEAELPIRLTAHTPCFRSEAGSY 284
Query: 64 GRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGA 123
GRDTRG+ R HQF+KVE +T H D S++ L+EM ++E LG+ YRV+++ +G
Sbjct: 285 GRDTRGMIRQHQFDKVEMVQIT--HPDRSYEALEEMTGHAEAVLRKLGLPYRVMSLCTGD 342
Query: 124 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATAC 177
+ AAK DLE W P +RE+ S SNC +Q+RRL R+ + K + +
Sbjct: 343 MGFGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGL 402
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFV 206
A R + A+LE +Q G V +P+ LR ++
Sbjct: 403 AVGRTLVAVLENYQQADGSVAVPEVLRPYL 432
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+KVE +T H D S++ L+EM ++E LG+ YRV+++ +G +
Sbjct: 287 DTRGMIRQHQFDKVEMVQIT--HPDRSYEALEEMTGHAEAVLRKLGLPYRVMSLCTGDMG 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK DLE W P +RE+ S SNC A+Q+RRL R+ K K E VH LN +
Sbjct: 345 FGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARF---KNAQGKNELVHTLNGSG 401
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + A+LE +Q G V +P+ LR ++
Sbjct: 402 LAVGRTLVAVLENYQQADGSVAVPEVLRPYL 432
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 520 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA- 578
KG + G+ P+ L YLI TSE P+ RD +PEA LPIR + CFR E +
Sbjct: 228 KGGQDGEPVPDNAAL---YLIPTSEVPLTNFVRDQVVPEAELPIRLTAHTPCFRSEAGSY 284
Query: 579 -----GMCRTY 584
GM R +
Sbjct: 285 GRDTRGMIRQH 295
>gi|325675174|ref|ZP_08154860.1| serine--tRNA ligase [Rhodococcus equi ATCC 33707]
gi|325554135|gb|EGD23811.1| serine--tRNA ligase [Rhodococcus equi ATCC 33707]
Length = 421
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 113/203 (55%), Gaps = 26/203 (12%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L + P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 222 DDLYLVGTSEVPLAGYHSGEILDLSKGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 281
Query: 79 VEQFVLTSPHDDE-------SWK--MLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAA 129
VE F P D + +W+ MLD M G+ YRV+++ G L +AA
Sbjct: 282 VEMFTYCKPEDADAEHQRLLAWERDMLDAM-----------GLPYRVIDVAGGDLGSSAA 330
Query: 130 KKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVIC 184
+K D EAW P A+REL S SNC YQ+RRL VRY K A ATTR +
Sbjct: 331 RKFDCEAWVPTQQAYRELTSTSNCTTYQARRLSVRYRDENGKPQTAATLNGTLATTRWLV 390
Query: 185 AILETHQTETG-VRIPDCLRKFV 206
AILE HQ G VR+P L FV
Sbjct: 391 AILENHQQADGSVRVPAALVPFV 413
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ ++ + +G+ YRV+++ G L
Sbjct: 269 DTRGIIRVHQFDKVEMFTYCKPEDADAEH--QRLLAWERDMLDAMGLPYRVIDVAGGDLG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC YQ+RRL VRY + N K + LN T
Sbjct: 327 SSAARKFDCEAWVPTQQAYRELTSTSNCTTYQARRLSVRY---RDENGKPQTAATLNGT- 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 383 LATTRWLVAILENHQQADGSVRVPAALVPFV 413
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H L + P RY G S+CFR+E
Sbjct: 222 DDLYLVGTSEVPLAGYHSGEILDLSKGPKRYAGWSSCFRREA 263
>gi|116668708|ref|YP_829641.1| seryl-tRNA synthetase [Arthrobacter sp. FB24]
gi|166200597|sp|A0JR71.1|SYS_ARTS2 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|116608817|gb|ABK01541.1| seryl-tRNA synthetase [Arthrobacter sp. FB24]
Length = 426
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 117/199 (58%), Gaps = 13/199 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H D L ++ PIRY G S+C+R+E GSHG+DTRGI RVHQF K
Sbjct: 221 DDLYLVGTSEVALAGYHADEILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNK 280
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ T+ +E+ + ++ EE A + YRV++ +G L ++AA+K D EAW
Sbjct: 281 VEMFIYTTV--EEAAAEHERLLAWEEEMLAKCELPYRVIDTAAGDLGNSAARKFDCEAWV 338
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVR----------YGQTKQKIYATACATTRVICAILE 188
P GA+REL S SNC +Q+RRL +R G ATTR I AILE
Sbjct: 339 PTQGAYRELTSTSNCTTFQARRLNIRERVLNEDGAPKGTRAVATLNGTLATTRWIVAILE 398
Query: 189 THQTETG-VRIPDCLRKFV 206
HQ E G V +P L+K++
Sbjct: 399 HHQNEDGSVNVPRALQKYL 417
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 12/161 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE F+ T+ +E+ + ++ EE A + YRV++ +G L
Sbjct: 268 DTRGIIRVHQFNKVEMFIYTTV--EEAAAEHERLLAWEEEMLAKCELPYRVIDTAAGDLG 325
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK-----IEFVHM 417
++AA+K D EAW P GA+REL S SNC +Q+RRL +R + +NE V
Sbjct: 326 NSAARKFDCEAWVPTQGAYRELTSTSNCTTFQARRLNIR---ERVLNEDGAPKGTRAVAT 382
Query: 418 LNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
LN T ATTR I AILE HQ E G V +P L+K++ + V
Sbjct: 383 LNGT-LATTRWIVAILEHHQNEDGSVNVPRALQKYLGGLEV 422
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H D L ++ PIRY G S+C+R+E
Sbjct: 221 DDLYLVGTSEVALAGYHADEILDLSAGPIRYAGQSSCYRREA 262
>gi|57505889|ref|ZP_00371814.1| seryl-tRNA synthetase [Campylobacter upsaliensis RM3195]
gi|57015919|gb|EAL52708.1| seryl-tRNA synthetase [Campylobacter upsaliensis RM3195]
Length = 411
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI+TSE + + D L +LP++ S CFR+E GS GRDTRGI R H
Sbjct: 215 KVEEEDLYLISTSEIALTNLFNDEILNAENLPLKMTAYSACFRKEAGSAGRDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE +TSP ES + +EM + + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSITSPKQSES--VFNEMCECASDLLSSLGLAHRWMMLCTGDLGFSAAKTIDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W PG FRE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E
Sbjct: 333 EVWLPGQNQFREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G + IPD LRK+
Sbjct: 393 NYQDKNGKIAIPDVLRKY 410
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +TSP ES +EM + + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITSPKQSES--VFNEMCECASDLLSSLGLAHRWMMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG FRE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTIDLEVWLPGQNQFREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD LRK+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKNGKIAIPDVLRKY 410
>gi|395237793|ref|ZP_10415813.1| seryl-tRNA synthetase [Turicella otitidis ATCC 51513]
gi|394486892|emb|CCI83901.1| seryl-tRNA synthetase [Turicella otitidis ATCC 51513]
Length = 469
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H D + ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 267 ERDDLYLVGTSEVALAGYHADEIIDLSNGPVRYAGWSSCFRREAGSYGKDTRGILRVHQF 326
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +E+ + +++ E A + + YRV+++ G L +AA+K D EA
Sbjct: 327 DKLEMFVYCRP--EEAAEQHQKLLDLEREMLAAVEVPYRVIDVAGGDLGASAARKFDTEA 384
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL RY K ++ AT ATTR + AILE +Q
Sbjct: 385 WVPTQGTYRELTSTSNCTTFQARRLKTRYRDESGKPQVAATLNGTLATTRWLVAILENNQ 444
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 445 RADGSVVVPEALRPFV 460
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +E+ + +++ E A + + YRV+++ G L
Sbjct: 316 DTRGILRVHQFDKLEMFVYCRP--EEAAEQHQKLLDLEREMLAAVEVPYRVIDVAGGDLG 373
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 374 ASAARKFDTEAWVPTQGTYRELTSTSNCTTFQARRLKTRY---RDESGKPQVAATLNGT- 429
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 430 LATTRWLVAILENNQRADGSVVVPEALRPFV 460
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD YL+ TSE + H D + ++ P+RY G S+CFR+E +
Sbjct: 267 ERDDLYLVGTSEVALAGYHADEIIDLSNGPVRYAGWSSCFRREAGS 312
>gi|377561501|ref|ZP_09790952.1| seryl-tRNA synthetase [Gordonia otitidis NBRC 100426]
gi|377521345|dbj|GAB36117.1| seryl-tRNA synthetase [Gordonia otitidis NBRC 100426]
Length = 426
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 119/197 (60%), Gaps = 8/197 (4%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQ 75
D+ DD YL+ TSE P+ H D + + P RY G STCFR+E GS+G+DTRGI RVHQ
Sbjct: 219 DKDDDLYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQ 278
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
F+KVE FV P D + +++ +E A + + YRV+++ G L +AA+K D E
Sbjct: 279 FDKVEGFVYCKPEDAAAEHQ--KLLGWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCE 336
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ--TKQKIYAT---ACATTRVICAILETH 190
AW P +REL S SNC +Q+RRL +RY K ++ AT ATTR I AILE H
Sbjct: 337 AWVPTQQTYRELTSTSNCTTFQARRLSIRYRDEAGKPQVAATLNGTLATTRWIVAILENH 396
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V +P+ L ++V
Sbjct: 397 QQADGSVVLPEELARYV 413
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D + +++ +E A + + YRV+++ G L
Sbjct: 269 DTRGIIRVHQFDKVEGFVYCKPED--AAAEHQKLLGWEKEMLAAIDVPYRVIDVAGGDLG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + K + LN T
Sbjct: 327 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLSIRY---RDEAGKPQVAATLNGT- 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V +P+ L ++V
Sbjct: 383 LATTRWIVAILENHQQADGSVVLPEELARYV 413
Score = 47.4 bits (111), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 516 EVIGKGEKVGDSAPEK---DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCF 572
EV+G +G A E D+ DD YL+ TSE P+ H D + + P RY G STCF
Sbjct: 200 EVMGGTGFLGAHADEVYHLDKDDDLYLVGTSEVPLAGYHMDEIIDLSDGPKRYAGWSTCF 259
Query: 573 RQEC 576
R+E
Sbjct: 260 RREA 263
>gi|284988898|ref|YP_003407452.1| seryl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
gi|284062143|gb|ADB73081.1| seryl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
Length = 433
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 117/200 (58%), Gaps = 9/200 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + + + L ++ P+RY G S+CFR+E GS+G+DTRGI RVH F
Sbjct: 218 ERDDLYLVGTSEVALAGMRSNEVLDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHWF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D + + ++ EEF L + YRVV+I +G L +AA+K D+EA
Sbjct: 278 DKVEMFSFCRPED--AAEEHRRLLAWEEEFLQALELPYRVVDIAAGDLGTSAARKYDIEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETH 190
WFP G +REL S S+C +Q+RRL RY QT + T CA R I +LE H
Sbjct: 336 WFPSQGTYRELTSTSDCTTFQARRLNTRYRDAEGKNQTAATLNGTLCAVARTIACLLEVH 395
Query: 191 QTETG-VRIPDCLRKFVPAV 209
Q G V +P LR ++ V
Sbjct: 396 QRADGSVYVPKALRPWLGGV 415
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 87/154 (56%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVH F+KVE F P D + + ++ EEF L + YRVV+I +G L
Sbjct: 267 DTRGIIRVHWFDKVEMFSFCRPED--AAEEHRRLLAWEEEFLQALELPYRVVDIAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D+EAWFP G +REL S S+C +Q+RRL RY + N+ LN T
Sbjct: 325 TSAARKYDIEAWFPSQGTYRELTSTSDCTTFQARRLNTRYRDAEGKNQT---AATLNGTL 381
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
CA R I +LE HQ G V +P LR ++ V
Sbjct: 382 CAVARTIACLLEVHQRADGSVYVPKALRPWLGGV 415
>gi|358463096|ref|ZP_09173186.1| seryl-tRNA synthetase [Frankia sp. CN3]
gi|357070754|gb|EHI80416.1| seryl-tRNA synthetase [Frankia sp. CN3]
Length = 420
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 116/195 (59%), Gaps = 7/195 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +L T+E + +H L A LPIRY G+S CFR+E+GS RD RG+ RVHQFEK
Sbjct: 220 DDAFLAGTAEVSLVGLHAGEILDAARLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV+ + DES + E++ +E LG+AY VV +G + + D+ WF
Sbjct: 280 VEQFVICANDQDESDRWHAELLGTAESILQALGLAYEVVECATGDMGVGKYRMNDINTWF 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQT 192
P G FRE SCS+ D+Q+RR VRY T +I+ TA AT R++ A+LE QT
Sbjct: 340 PSLGMFRETHSCSSLKDWQARRANVRYRTTDGEIHFAYTLNNTAVATPRLLAAVLENFQT 399
Query: 193 ETG-VRIPDCLRKFV 206
G +R+P+ LR ++
Sbjct: 400 ADGALRVPEVLRPYL 414
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D RG+ RVHQFEKVEQFV+ + DES + E++ +E LG+AY VV +G
Sbjct: 264 ASRDVRGLLRVHQFEKVEQFVICANDQDESDRWHAELLGTAESILQALGLAYEVVECATG 323
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+ + D+ WFP G FRE SCS+ +Q+RR VRY T + +I F + LN
Sbjct: 324 DMGVGKYRMNDINTWFPSLGMFRETHSCSSLKDWQARRANVRYRTT---DGEIHFAYTLN 380
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
TA AT R++ A+LE QT G +R+P+ LR ++
Sbjct: 381 NTAVATPRLLAAVLENFQTADGALRVPEVLRPYL 414
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD +L T+E + +H L A LPIRY G+S CFR+E
Sbjct: 220 DDAFLAGTAEVSLVGLHAGEILDAARLPIRYAGISPCFRREI 261
>gi|398817866|ref|ZP_10576470.1| seryl-tRNA synthetase [Brevibacillus sp. BC25]
gi|398029145|gb|EJL22632.1| seryl-tRNA synthetase [Brevibacillus sp. BC25]
Length = 426
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 120/203 (59%), Gaps = 10/203 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E D +LI T+E P+ +HRD + A LP Y S CFR E GS GRDTRG+ R H
Sbjct: 220 KIEGPDYFLIPTAEVPVTNMHRDEIMDGADLPRYYTAFSACFRSEAGSAGRDTRGLIRQH 279
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVE P +ES+ LD++++N+E+ LG+ YRV+++ +G L AAKK DL
Sbjct: 280 QFNKVELVKFVKP--EESYDELDKLVKNAEKVLQLLGLPYRVLSMCTGDLGFTAAKKFDL 337
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ-TKQK------IYATACATTRVICAIL 187
E W P G +RE+ SCSN D+Q+RR +R+ + TK K + + A R + AIL
Sbjct: 338 EVWIPSGGTYREISSCSNFEDFQARRANIRFRRDTKSKPEFVHTLNGSGLAIGRTVAAIL 397
Query: 188 ETHQTETG-VRIPDCLRKFVPAV 209
E +Q G + IP+ LR ++ V
Sbjct: 398 ENYQDADGAIVIPEVLRPYMGGV 420
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE P +ES+ LD++++N+E+ LG+ YRV+
Sbjct: 263 SEAGSAGRDTRGLIRQHQFNKVELVKFVKP--EESYDELDKLVKNAEKVLQLLGLPYRVL 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
++ +G L AAKK DLE W P G +RE+ SCSN +Q+RR +R+ + K K EF
Sbjct: 321 SMCTGDLGFTAAKKFDLEVWIPSGGTYREISSCSNFEDFQARRANIRFRRDTK--SKPEF 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
VH LN + A R + AILE +Q G + IP+ LR ++ V
Sbjct: 379 VHTLNGSGLAIGRTVAAILENYQDADGAIVIPEVLRPYMGGV 420
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E D +LI T+E P+ +HRD + A LP Y S CFR E
Sbjct: 220 KIEGPDYFLIPTAEVPVTNMHRDEIMDGADLPRYYTAFSACFRSEA 265
>gi|262183297|ref|ZP_06042718.1| seryl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
Length = 420
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H++ + + P++Y G S+CFR+E GSHG+DTRGI RVHQF+K
Sbjct: 219 DDLYLVGTSEVALAGYHKEEIIDLSKGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E FV P D E +M +++ ++ + ++YR ++I G L +AA+K D EAW
Sbjct: 279 LEMFVYCKPEDAE--EMHQKLLNMEKDMLEAMELSYRTIDIAGGDLGSSAARKFDNEAWV 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL RY K A ATTR + AILE HQ
Sbjct: 337 PTQDTYRELTSTSNCTTFQARRLSTRYRDENGKTQYAATLNGTLATTRWLVAILENHQQA 396
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 397 DGSVVVPEALRPFV 410
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D E +++ ++ + ++YR ++I G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCKPEDAEEMHQ--KLLNMEKDMLEAMELSYRTIDIAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K ++ LN T
Sbjct: 324 SSAARKFDNEAWVPTQDTYRELTSTSNCTTFQARRLSTRY---RDENGKTQYAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENHQQADGSVVVPEALRPFV 410
>gi|223041022|ref|ZP_03611280.1| seryl-tRNA synthetase [Campylobacter rectus RM3267]
gi|222877694|gb|EEF12817.1| seryl-tRNA synthetase [Campylobacter rectus RM3267]
Length = 414
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 119/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI TSE P+ ++ D LP SLPI+ S CFR+E GS GRDTRG+ R HQFEK
Sbjct: 223 EDLYLIPTSEVPVTNLYNDEILPVESLPIKMTCYSACFRKEAGSAGRDTRGMIRQHQFEK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T+P ++S +MLDEM+ + + LG+ +R + + SG L +AAK +DLE W
Sbjct: 283 VELVSITTP--EQSAQMLDEMVACASDLLTSLGLPHRHMLLCSGDLGFSAAKTIDLEVWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA-----TACATTRVICAILETHQTE 193
PG +RE+ S SN D+Q+RR +RY K+ A ++ A R + AI+E +Q
Sbjct: 341 PGQNKYREISSVSNTRDFQARRAKIRYKDGKKNALAHTLNGSSLAVGRTLIAIMENYQKA 400
Query: 194 TG-VRIPDCLRKFV 206
G + IP+ L+ ++
Sbjct: 401 DGSIEIPEVLKGYI 414
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 7/154 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQFEKVE +T+P ++S + LDEM+ + + LG+ +R + + SG
Sbjct: 267 AGRDTRGMIRQHQFEKVELVSITTP--EQSAQMLDEMVACASDLLTSLGLPHRHMLLCSG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SN +Q+RR +RY KK H LN
Sbjct: 325 DLGFSAAKTIDLEVWLPGQNKYREISSVSNTRDFQARRAKIRYKDGKKN----ALAHTLN 380
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
++ A R + AI+E +Q G + IP+ L+ ++
Sbjct: 381 GSSLAVGRTLIAIMENYQKADGSIEIPEVLKGYI 414
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
+D YLI TSE P+ ++ D LP SLPI+ S CFR+E + GM R +
Sbjct: 223 EDLYLIPTSEVPVTNLYNDEILPVESLPIKMTCYSACFRKEAGSAGRDTRGMIRQH 278
>gi|291005181|ref|ZP_06563154.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 421
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H + + P+RY G S+CFR+E GS+GRDTRGI RVHQF
Sbjct: 218 EEDDLYLVGTSEVPLAGYHSGEIIDLGAGPLRYAGWSSCFRREAGSYGRDTRGIIRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
K+E FV ++++ + ++ EE A + + YRV++ +G L +AA+K D EA
Sbjct: 278 NKLEMFVYC--REEDAVAEHERLLGWEEEMLAKIEVPYRVIDTAAGDLGASAARKYDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--QKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY + +I AT ATTR I AILE HQ
Sbjct: 336 WIPSQQTYRELTSTSNCTTFQARRLNTRYREADGPTRIAATLNGTLATTRWIVAILENHQ 395
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR F+
Sbjct: 396 QADGSVRVPEALRPFL 411
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF K+E FV ++++ + ++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFNKLEMFVYC--REEDAVAEHERLLGWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY ++ + LN T
Sbjct: 325 ASAARKYDCEAWIPSQQTYRELTSTSNCTTFQARRLNTRY---READGPTRIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P+ LR F+
Sbjct: 381 LATTRWIVAILENHQQADGSVRVPEALRPFL 411
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H + + P+RY G S+CFR+E
Sbjct: 218 EEDDLYLVGTSEVPLAGYHSGEIIDLGAGPLRYAGWSSCFRREA 261
>gi|15221121|ref|NP_172651.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332190686|gb|AEE28807.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
Length = 512
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 22/212 (10%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+ LI T+E P+ +H DS L E++LP++Y+ S CFR E G+ G T+G++RVHQF K
Sbjct: 297 DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKA 356
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L A +K D+EAW P
Sbjct: 357 EMFVICQPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMP 414
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKQK-----------IYATACATT 180
G G F E+ S SNC DYQSRRL +RY G K K + ATACA
Sbjct: 415 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVP 474
Query: 181 RVICAILETHQTETG-VRIPDCLRKFVPAVYL 211
R++ +LE +Q E G V IP+ LR F+ + L
Sbjct: 475 RMMVCLLENYQQEDGSVVIPEPLRPFMGGIEL 506
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 97/163 (59%), Gaps = 13/163 (7%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
T+G++RVHQF K E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L
Sbjct: 344 TKGLYRVHQFSKAEMFVICQPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGA 401
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY-----GQTKKMNEK-----IE 413
A +K D+EAW PG G F E+ S SNC YQSRRL +RY QT K +
Sbjct: 402 PAYRKFDIEAWMPGLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATK 461
Query: 414 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
FVH LNATACA R++ +LE +Q E G V IP+ LR F+ +
Sbjct: 462 FVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEPLRPFMGGI 504
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
D+ LI T+E P+ +H DS L E++LP++Y+ S CFR E
Sbjct: 297 DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTE 336
>gi|404446115|ref|ZP_11011237.1| seryl-tRNA ligase [Mycobacterium vaccae ATCC 25954]
gi|403651007|gb|EJZ06179.1| seryl-tRNA ligase [Mycobacterium vaccae ATCC 25954]
Length = 419
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H L + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHSGEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E+ ++ + + + YRV++I +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCRPEDAEAEHQ--RLLGWQRQMLGLIEVPYRVIDIAAGDLGSSAARKYDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL VRY K A ATTR + AILE HQ
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLSVRYRDENGKPQTAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VRIP+ L ++
Sbjct: 395 QSDGSVRIPEALVPYL 410
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ ++ + + + YRV++I +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCRPEDAEAEH--QRLLGWQRQMLGLIEVPYRVIDIAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 SSAARKYDCEAWVPTQNTYRELTSTSNCTTFQARRLSVRY---RDENGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VRIP+ L ++
Sbjct: 380 LATTRWLVAILENHQQSDGSVRIPEALVPYL 410
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H L + P+RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHSGEILDLSGGPLRYAGWSSCFRREA 260
>gi|30682484|ref|NP_849647.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
gi|20268723|gb|AAM14065.1| putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|21689901|gb|AAM67511.1| putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332190684|gb|AEE28805.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
Length = 514
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 22/212 (10%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+ LI T+E P+ +H DS L E++LP++Y+ S CFR E G+ G T+G++RVHQF K
Sbjct: 299 DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKA 358
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L A +K D+EAW P
Sbjct: 359 EMFVICQPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMP 416
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKQK-----------IYATACATT 180
G G F E+ S SNC DYQSRRL +RY G K K + ATACA
Sbjct: 417 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVP 476
Query: 181 RVICAILETHQTETG-VRIPDCLRKFVPAVYL 211
R++ +LE +Q E G V IP+ LR F+ + L
Sbjct: 477 RMMVCLLENYQQEDGSVVIPEPLRPFMGGIEL 508
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 97/163 (59%), Gaps = 13/163 (7%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
T+G++RVHQF K E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L
Sbjct: 346 TKGLYRVHQFSKAEMFVICQPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGA 403
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY-----GQTKKMNEK-----IE 413
A +K D+EAW PG G F E+ S SNC YQSRRL +RY QT K +
Sbjct: 404 PAYRKFDIEAWMPGLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATK 463
Query: 414 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
FVH LNATACA R++ +LE +Q E G V IP+ LR F+ +
Sbjct: 464 FVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEPLRPFMGGI 506
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
D+ LI T+E P+ +H DS L E++LP++Y+ S CFR E
Sbjct: 299 DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTE 338
>gi|120612410|ref|YP_972088.1| seryl-tRNA synthetase [Acidovorax citrulli AAC00-1]
gi|166200589|sp|A1TTM6.1|SYS_ACIAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|120590874|gb|ABM34314.1| seryl-tRNA synthetase [Acidovorax citrulli AAC00-1]
Length = 439
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 121/210 (57%), Gaps = 12/210 (5%)
Query: 4 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSH 63
KG + G+ P+ L YLI TSE P+ RD +PE+ LPIR + CFR E GS+
Sbjct: 228 KGGQDGEPVPDNAAL---YLIPTSEVPLTNFVRDQVVPESELPIRLTAHTPCFRSEAGSY 284
Query: 64 GRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGA 123
GRDTRG+ R HQF+KVE +T H D S++ L+EM ++E LG+ YRV+++ +G
Sbjct: 285 GRDTRGMIRQHQFDKVEMVQIT--HPDRSYEALEEMTGHAEAVLQKLGLPYRVMSLCTGD 342
Query: 124 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATAC 177
+ AAK DLE W P +RE+ S SNC +Q+RRL R+ + K + +
Sbjct: 343 MGFGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGL 402
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFV 206
A R + A+LE +Q G V +P+ LR ++
Sbjct: 403 AVGRTLVAVLENYQQADGSVAVPEALRPYL 432
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+KVE +T H D S++ L+EM ++E LG+ YRV+++ +G +
Sbjct: 287 DTRGMIRQHQFDKVEMVQIT--HPDRSYEALEEMTGHAEAVLQKLGLPYRVMSLCTGDMG 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK DLE W P +RE+ S SNC A+Q+RRL R+ K K E VH LN +
Sbjct: 345 FGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARF---KNAQGKNELVHTLNGSG 401
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + A+LE +Q G V +P+ LR ++
Sbjct: 402 LAVGRTLVAVLENYQQADGSVAVPEALRPYL 432
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 520 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA- 578
KG + G+ P+ L YLI TSE P+ RD +PE+ LPIR + CFR E +
Sbjct: 228 KGGQDGEPVPDNAAL---YLIPTSEVPLTNFVRDQVVPESELPIRLTAHTPCFRSEAGSY 284
Query: 579 -----GMCRTY 584
GM R +
Sbjct: 285 GRDTRGMIRQH 295
>gi|225022356|ref|ZP_03711548.1| hypothetical protein CORMATOL_02395 [Corynebacterium matruchotii
ATCC 33806]
gi|305680222|ref|ZP_07403030.1| serine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
gi|224944869|gb|EEG26078.1| hypothetical protein CORMATOL_02395 [Corynebacterium matruchotii
ATCC 33806]
gi|305659753|gb|EFM49252.1| serine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
Length = 419
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + ++ P +Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSNGPRKYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +E+ E++ + + + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKLEMFVYCKP--EEAAAQHQELLGMERDMLSAIEVPYRVIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC YQ+RRL RY K + A ATTR + AILE HQ
Sbjct: 335 WVPTQNTYRELTSTSNCTTYQARRLRTRYRDEAGKAHIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVVVPEALRPFV 410
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +E+ E++ + + + + YRV+++ G L
Sbjct: 266 DTRGIIRVHQFDKLEMFVYCKP--EEAAAQHQELLGMERDMLSAIEVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC YQ+RRL RY + K LN T
Sbjct: 324 SSAARKFDTEAWVPTQNTYRELTSTSNCTTYQARRLRTRY---RDEAGKAHIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENHQQADGSVVVPEALRPFV 410
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + ++ P +Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSNGPRKYAGWSSCFRREA 260
>gi|3157938|gb|AAC17621.1| Similar to seryl-tRNA synthetase gb|U10400 from S cerevisiae. EST
gb|N96627 comes from this gene [Arabidopsis thaliana]
Length = 573
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 22/212 (10%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+ LI T+E P+ +H DS L E++LP++Y+ S CFR E G+ G T+G++RVHQF K
Sbjct: 318 DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKA 377
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L A +K D+EAW P
Sbjct: 378 EMFVICQPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMP 435
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKQK-----------IYATACATT 180
G G F E+ S SNC DYQSRRL +RY G K K + ATACA
Sbjct: 436 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVP 495
Query: 181 RVICAILETHQTETG-VRIPDCLRKFVPAVYL 211
R++ +LE +Q E G V IP+ LR F+ + L
Sbjct: 496 RMMVCLLENYQQEDGSVVIPEPLRPFMGGIEL 527
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 97/163 (59%), Gaps = 13/163 (7%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
T+G++RVHQF K E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L
Sbjct: 365 TKGLYRVHQFSKAEMFVICQPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGA 422
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY-----GQTKKMNEK-----IE 413
A +K D+EAW PG G F E+ S SNC YQSRRL +RY QT K +
Sbjct: 423 PAYRKFDIEAWMPGLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATK 482
Query: 414 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
FVH LNATACA R++ +LE +Q E G V IP+ LR F+ +
Sbjct: 483 FVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEPLRPFMGGI 525
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
D+ LI T+E P+ +H DS L E++LP++Y+ S CFR E
Sbjct: 318 DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTE 357
>gi|348175400|ref|ZP_08882294.1| seryl-tRNA synthetase [Saccharopolyspora spinosa NRRL 18395]
Length = 420
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H + ++ P+RY G STCFR+E GS+GRDTRGI RVHQF
Sbjct: 218 EEDDLYLVGTSEVPLAGYHAGEIVDLSAGPLRYAGWSTCFRREAGSYGRDTRGIIRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
K+E FV DE+ ++ EE A + + YRV++ +G L +AA+K D EA
Sbjct: 278 NKLEMFVYCRA--DEARDEHQRLLAWEEEMLAKIEVPYRVIDTAAGDLGASAARKFDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY + +I AT ATTR I AILE HQ
Sbjct: 336 WVPSQQTYRELTSTSNCTTFQARRLNTRYRDEDGRPQIAATLNGTLATTRWIVAILENHQ 395
Query: 192 TETG-VRIPDCLRKFV 206
G V++P+ LR F+
Sbjct: 396 QPDGSVQVPEALRPFL 411
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF K+E FV DE+ ++ EE A + + YRV++ +G L
Sbjct: 267 DTRGIIRVHQFNKLEMFVYCRA--DEARDEHQRLLAWEEEMLAKIEVPYRVIDTAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + + + LN T
Sbjct: 325 ASAARKFDCEAWVPSQQTYRELTSTSNCTTFQARRLNTRY---RDEDGRPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V++P+ LR F+
Sbjct: 381 LATTRWIVAILENHQQPDGSVQVPEALRPFL 411
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H + ++ P+RY G STCFR+E
Sbjct: 218 EEDDLYLVGTSEVPLAGYHAGEIVDLSAGPLRYAGWSTCFRREA 261
>gi|319950525|ref|ZP_08024436.1| seryl-tRNA synthetase [Dietzia cinnamea P4]
gi|319435809|gb|EFV91018.1| seryl-tRNA synthetase [Dietzia cinnamea P4]
Length = 420
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+ L ++ P RY G S+CFR+E GSHG+DTRGI RVHQF
Sbjct: 218 EDDDLYLVGTSEVALAGYHQGEILDLSAGPKRYCGWSSCFRREAGSHGKDTRGIIRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P +E+ + ++ +E +G+ +RV++I G L +AA+K D EA
Sbjct: 278 DKVEMFSWCKP--EEAHEEHKRLLGFEKEMLEAMGLPFRVIDIAGGDLGSSAARKYDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +Q+RRL VRY + + A ATTR + AILE HQ
Sbjct: 336 WVPTQGTYRELTSTSNCTTFQARRLGVRYRDDEGRTQTAATLNGTLATTRWLVAILENHQ 395
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 396 QADGSVVVPEALRPFV 411
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P +E+ + ++ +E +G+ +RV++I G L
Sbjct: 267 DTRGIIRVHQFDKVEMFSWCKP--EEAHEEHKRLLGFEKEMLEAMGLPFRVIDIAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL VRY + + + LN T
Sbjct: 325 SSAARKYDCEAWVPTQGTYRELTSTSNCTTFQARRLGVRY---RDDEGRTQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P+ LR FV
Sbjct: 381 LATTRWLVAILENHQQADGSVVVPEALRPFV 411
>gi|258650495|ref|YP_003199651.1| seryl-tRNA synthetase [Nakamurella multipartita DSM 44233]
gi|258553720|gb|ACV76662.1| seryl-tRNA synthetase [Nakamurella multipartita DSM 44233]
Length = 420
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 116/193 (60%), Gaps = 8/193 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ T+E P+ H L ++ P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDMYLVGTAEVPLAGYHAGEILDLSAGPLRYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D +++ E+ A + + YRV++ +G L +AA+K D EA
Sbjct: 277 DKVEMFVFCKPEDAADQHA--QLLSFEEQMLAQMELPYRVIDTAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL VRY K ++ AT ATTR + AILE HQ
Sbjct: 335 WVPTQQTYRELTSTSNCTTFQARRLGVRYRDEDGKPQVAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLR 203
G VR+P L+
Sbjct: 395 QADGSVRVPKALQ 407
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 86/148 (58%), Gaps = 7/148 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D +++ E+ A + + YRV++ +G L
Sbjct: 266 DTRGILRVHQFDKVEMFVFCKPEDAADQHA--QLLSFEEQMLAQMELPYRVIDTAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + + K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLGVRY---RDEDGKPQVAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLR 449
ATTR + AILE HQ G VR+P L+
Sbjct: 380 LATTRWLVAILENHQQADGSVRVPKALQ 407
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ T+E P+ H L ++ P+RY G S+CFR+E
Sbjct: 217 EADDMYLVGTAEVPLAGYHAGEILDLSAGPLRYAGWSSCFRREA 260
>gi|441518379|ref|ZP_21000102.1| serine--tRNA ligase [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441454782|dbj|GAC58063.1| serine--tRNA ligase [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 418
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D L + P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EEDDLYLVGTSEVPLAGYHSDEILDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D E+ ++ + A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCKPEDAEAEHQ--RLLDFEKSMLAAIDVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K A ATTR + AILE HQ
Sbjct: 335 WVPSQNTYRELTSTSNCTTFQARRLATRYRDENGKPQTAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +PD L F
Sbjct: 395 QPDGSVILPDELATFT 410
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E+ ++ + A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCKPEDAEAEHQ--RLLDFEKSMLAAIDVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPSQNTYRELTSTSNCTTFQARRLATRY---RDENGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +PD L F
Sbjct: 380 LATTRWLVAILENHQQPDGSVILPDELATFT 410
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H D L + P RY G S+CFR+E
Sbjct: 217 EEDDLYLVGTSEVPLAGYHSDEILDLSDGPKRYAGWSSCFRREA 260
>gi|424859269|ref|ZP_18283283.1| seryl-tRNA synthetase [Rhodococcus opacus PD630]
gi|356661778|gb|EHI42089.1| seryl-tRNA synthetase [Rhodococcus opacus PD630]
Length = 418
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 111/194 (57%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L A RY G STCFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLADGAKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D ++ ++ + A + + YRV+++ G L +AA+K D EAW
Sbjct: 280 VEMFTYCKPEDADAEHQ--RLLAWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL VRY K A ATTR I AILE HQ
Sbjct: 338 PTQQAYRELTSTSNCTTFQARRLGVRYRDENGKPQTAATLNGTLATTRWIVAILENHQQS 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ L FV
Sbjct: 398 DGTVRVPEALVPFV 411
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ ++ + A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFTYCKPEDADAEH--QRLLAWERDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQQAYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P+ L FV
Sbjct: 381 LATTRWIVAILENHQQSDGTVRVPEALVPFV 411
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H L A RY G STCFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLADGAKRYAGWSTCFRREA 261
>gi|227834214|ref|YP_002835921.1| seryl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
gi|227455230|gb|ACP33983.1| Seryl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
Length = 434
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H++ + + P++Y G S+CFR+E GSHG+DTRGI RVHQF+K
Sbjct: 233 DDLYLVGTSEVALAGYHKEEIIDLSKGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDK 292
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E FV P D E +M +++ ++ + ++YR ++I G L +AA+K D EAW
Sbjct: 293 LEMFVYCKPEDAE--EMHQKLLNMEKDMLEAMELSYRTIDIAGGDLGSSAARKFDNEAWV 350
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL RY K A ATTR + AILE HQ
Sbjct: 351 PTQDTYRELTSTSNCTTFQARRLSTRYRDENGKTQYAATLNGTLATTRWLVAILENHQQA 410
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 411 DGSVVVPEALRPFV 424
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D E +++ ++ + ++YR ++I G L
Sbjct: 280 DTRGILRVHQFDKLEMFVYCKPEDAEEMH--QKLLNMEKDMLEAMELSYRTIDIAGGDLG 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K ++ LN T
Sbjct: 338 SSAARKFDNEAWVPTQDTYRELTSTSNCTTFQARRLSTRY---RDENGKTQYAATLNGT- 393
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P+ LR FV
Sbjct: 394 LATTRWLVAILENHQQADGSVVVPEALRPFV 424
>gi|134096775|ref|YP_001102436.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|133909398|emb|CAL99510.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 395
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H + + P+RY G S+CFR+E GS+GRDTRGI RVHQF
Sbjct: 192 EEDDLYLVGTSEVPLAGYHSGEIIDLGAGPLRYAGWSSCFRREAGSYGRDTRGIIRVHQF 251
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
K+E FV ++++ + ++ EE A + + YRV++ +G L +AA+K D EA
Sbjct: 252 NKLEMFVYC--REEDAVAEHERLLGWEEEMLAKIEVPYRVIDTAAGDLGASAARKYDCEA 309
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--QKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY + +I AT ATTR I AILE HQ
Sbjct: 310 WIPSQQTYRELTSTSNCTTFQARRLNTRYREADGPTRIAATLNGTLATTRWIVAILENHQ 369
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR F+
Sbjct: 370 QADGSVRVPEALRPFL 385
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF K+E FV ++++ + ++ EE A + + YRV++ +G L
Sbjct: 241 DTRGIIRVHQFNKLEMFVYC--REEDAVAEHERLLGWEEEMLAKIEVPYRVIDTAAGDLG 298
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY ++ + LN T
Sbjct: 299 ASAARKYDCEAWIPSQQTYRELTSTSNCTTFQARRLNTRY---READGPTRIAATLNGT- 354
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P+ LR F+
Sbjct: 355 LATTRWIVAILENHQQADGSVRVPEALRPFL 385
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H + + P+RY G S+CFR+E
Sbjct: 192 EEDDLYLVGTSEVPLAGYHSGEIIDLGAGPLRYAGWSSCFRREA 235
>gi|395205979|ref|ZP_10396610.1| serine--tRNA ligase [Propionibacterium humerusii P08]
gi|422440877|ref|ZP_16517690.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA3]
gi|422472003|ref|ZP_16548491.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA2]
gi|422572767|ref|ZP_16648334.1| seryl-tRNA synthetase [Propionibacterium acnes HL044PA1]
gi|313836482|gb|EFS74196.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA2]
gi|314928937|gb|EFS92768.1| seryl-tRNA synthetase [Propionibacterium acnes HL044PA1]
gi|314971072|gb|EFT15170.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA3]
gi|328906615|gb|EGG26390.1| serine--tRNA ligase [Propionibacterium humerusii P08]
Length = 424
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 119/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H + L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSEEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L I ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPEEAEAWH--EKLLSFEKDFITALEIPFQVLDVASGDLGLSAARKYDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P LR ++
Sbjct: 401 DGSVRVPKALRPYL 414
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L I ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPEEAEAWH--EKLLSFEKDFITALEIPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKYDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VR+P LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRVPKALRPYL 414
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H + L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSEEILDDAELPKRYVAFSPCYRREA 264
>gi|399046000|ref|ZP_10738537.1| seryl-tRNA synthetase [Brevibacillus sp. CF112]
gi|433545751|ref|ZP_20502098.1| seryl-tRNA synthetase [Brevibacillus agri BAB-2500]
gi|398055785|gb|EJL47835.1| seryl-tRNA synthetase [Brevibacillus sp. CF112]
gi|432182954|gb|ELK40508.1| seryl-tRNA synthetase [Brevibacillus agri BAB-2500]
Length = 426
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 10/198 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ +HRD + A LP Y S CFR E GS GRDTRG+ R HQF KV
Sbjct: 225 DYFLIPTAEVPVTNMHRDEIMDGADLPRYYAAFSACFRSEAGSAGRDTRGLIRQHQFNKV 284
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E P D S+ LD++++N+E+ LG+ YRV+++ +G L AAKK DLE W P
Sbjct: 285 ELVKFVKPED--SYDELDKLVKNAEKVLQLLGLPYRVMSMCTGDLGFTAAKKFDLEVWIP 342
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQ-TKQK------IYATACATTRVICAILETHQT 192
S +RE+ SCSN D+Q+RR +R+ + TK K + + A R + AILE +Q
Sbjct: 343 SSNTYREISSCSNFEDFQARRANIRFRRDTKSKPEFVHTLNGSGLAIGRTVAAILENYQE 402
Query: 193 ETG-VRIPDCLRKFVPAV 209
G + IP+ LR ++ V
Sbjct: 403 ADGSITIPEVLRPYMGGV 420
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE P D S+ LD++++N+E+ LG+ YRV+
Sbjct: 263 SEAGSAGRDTRGLIRQHQFNKVELVKFVKPED--SYDELDKLVKNAEKVLQLLGLPYRVM 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
++ +G L AAKK DLE W P S +RE+ SCSN +Q+RR +R+ + K K EF
Sbjct: 321 SMCTGDLGFTAAKKFDLEVWIPSSNTYREISSCSNFEDFQARRANIRFRRDTK--SKPEF 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
VH LN + A R + AILE +Q G + IP+ LR ++ V
Sbjct: 379 VHTLNGSGLAIGRTVAAILENYQEADGSITIPEVLRPYMGGV 420
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
D +LI T+E P+ +HRD + A LP Y S CFR E +
Sbjct: 225 DYFLIPTAEVPVTNMHRDEIMDGADLPRYYAAFSACFRSEAGSA 268
>gi|339006691|ref|ZP_08639266.1| seryl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|338775900|gb|EGP35428.1| seryl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
Length = 427
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI TSE P+ +HRD L A LPI+Y S CFR E GS GRDTRG+ R HQF KV
Sbjct: 225 DYFLIPTSEVPVTNMHRDEILDVAQLPIKYNAFSACFRSEAGSAGRDTRGLIRQHQFNKV 284
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E P D S++ L++++ N+E LG+ YRV+++ +G L AAKK DLE W P
Sbjct: 285 ELVKFVKPED--SYEELEKLVNNAETVLQMLGLPYRVMSMCTGDLGFTAAKKYDLEVWLP 342
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQT 192
+RE+ SCSN D+Q+RR +R+ + + + + A R + AILE +Q
Sbjct: 343 SYSTYREISSCSNFEDFQARRANIRFRRDAKSKPEFVHTMNGSGLALGRTVAAILENYQQ 402
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 403 EDGSVVIPEALRPYM 417
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE P D S++ L++++ N+E LG+ YRV+
Sbjct: 263 SEAGSAGRDTRGLIRQHQFNKVELVKFVKPED--SYEELEKLVNNAETVLQMLGLPYRVM 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
++ +G L AAKK DLE W P +RE+ SCSN +Q+RR +R+ + K K EF
Sbjct: 321 SMCTGDLGFTAAKKYDLEVWLPSYSTYREISSCSNFEDFQARRANIRFRRDAK--SKPEF 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH +N + A R + AILE +Q E G V IP+ LR ++
Sbjct: 379 VHTMNGSGLALGRTVAAILENYQQEDGSVVIPEALRPYM 417
Score = 47.8 bits (112), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
D +LI TSE P+ +HRD L A LPI+Y S CFR E +
Sbjct: 225 DYFLIPTSEVPVTNMHRDEILDVAQLPIKYNAFSACFRSEAGSA 268
>gi|406997676|gb|EKE15700.1| hypothetical protein ACD_11C00110G0008 [uncultured bacterium]
Length = 442
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 125/214 (58%), Gaps = 10/214 (4%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
+ G+K D K++ K+L+ T+E + A + D L E LP++ G S C+R E+G
Sbjct: 223 VASGDKEADGKSSKEK---KFLVGTAEPSLLAYYSDEILKEQQLPVKVCGYSQCYRSEIG 279
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
S+G+DT+G++RVH+F KVEQ VL +++ S KM DEM S+E + +LG+ YR + I S
Sbjct: 280 SYGKDTKGLYRVHEFMKVEQVVLMEANEEASIKMHDEMFAISKEIHQELGLPYRALQICS 339
Query: 122 GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQ--KIYAT 175
G ++ + D+EAW PG A+ E S SN D+Q+RRL V+Y G K + T
Sbjct: 340 GDMSAGKYRAFDIEAWMPGRNAYGETGSASNFTDWQARRLNVKYVDKEGNKKHVFMLNNT 399
Query: 176 ACATTRVICAILETHQTETG-VRIPDCLRKFVPA 208
+ R AILE Q G V IP+ LRK++P
Sbjct: 400 VLPSPRPFIAILENFQQPDGSVVIPEVLRKYMPG 433
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G++RVH+F KVEQ VL +++ S K DEM S+E + +LG+ YR + I SG ++
Sbjct: 284 DTKGLYRVHEFMKVEQVVLMEANEEASIKMHDEMFAISKEIHQELGLPYRALQICSGDMS 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+ D+EAW PG A+ E S SN +Q+RRL V+Y K+ N+K V MLN T
Sbjct: 344 AGKYRAFDIEAWMPGRNAYGETGSASNFTDWQARRLNVKY-VDKEGNKK--HVFMLNNTV 400
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
+ R AILE Q G V IP+ LRK++P
Sbjct: 401 LPSPRPFIAILENFQQPDGSVVIPEVLRKYMPG 433
Score = 40.8 bits (94), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 518 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECD 577
+ G+K D K++ K+L+ T+E + A + D L E LP++ G S C+R E
Sbjct: 223 VASGDKEADGKSSKEK---KFLVGTAEPSLLAYYSDEILKEQQLPVKVCGYSQCYRSEIG 279
Query: 578 A------GMCRTYFHVTCAQREGLLSEATSE 602
+ G+ R + + Q +L EA E
Sbjct: 280 SYGKDTKGLYRVHEFMKVEQV--VLMEANEE 308
>gi|421874122|ref|ZP_16305729.1| seryl-tRNA synthetase [Brevibacillus laterosporus GI-9]
gi|372456777|emb|CCF15278.1| seryl-tRNA synthetase [Brevibacillus laterosporus GI-9]
Length = 427
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI TSE P+ +HRD L A LPI+Y S CFR E GS GRDTRG+ R HQF KV
Sbjct: 225 DYFLIPTSEVPVTNMHRDEILDVAQLPIKYNAFSACFRSEAGSAGRDTRGLIRQHQFNKV 284
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E P D S++ L++++ N+E LG+ YRV+++ +G L AAKK DLE W P
Sbjct: 285 ELVKFVKPED--SYEELEKLVNNAETVLQMLGLPYRVMSMCTGDLGFTAAKKYDLEVWLP 342
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQT 192
+RE+ SCSN D+Q+RR +R+ + + + + A R + AILE +Q
Sbjct: 343 SYSTYREISSCSNFEDFQARRANIRFRRDAKSKPEFVHTMNGSGLALGRTVAAILENYQQ 402
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 403 EDGSVIIPEALRPYM 417
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE P D S++ L++++ N+E LG+ YRV+
Sbjct: 263 SEAGSAGRDTRGLIRQHQFNKVELVKFVKPED--SYEELEKLVNNAETVLQMLGLPYRVM 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
++ +G L AAKK DLE W P +RE+ SCSN +Q+RR +R+ + K K EF
Sbjct: 321 SMCTGDLGFTAAKKYDLEVWLPSYSTYREISSCSNFEDFQARRANIRFRRDAK--SKPEF 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH +N + A R + AILE +Q E G V IP+ LR ++
Sbjct: 379 VHTMNGSGLALGRTVAAILENYQQEDGSVIIPEALRPYM 417
Score = 47.8 bits (112), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
D +LI TSE P+ +HRD L A LPI+Y S CFR E +
Sbjct: 225 DYFLIPTSEVPVTNMHRDEILDVAQLPIKYNAFSACFRSEAGSA 268
>gi|379733780|ref|YP_005327285.1| seryl-tRNA synthetase [Blastococcus saxobsidens DD2]
gi|378781586|emb|CCG01236.1| Seryl-tRNA synthetase [Blastococcus saxobsidens DD2]
Length = 433
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 118/200 (59%), Gaps = 9/200 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + +H L ++ P RY G S+CFR+E GS+G+DTRGI RVH F
Sbjct: 218 ERDDLYLVGTSEVALAGMHSGEVLELSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHWF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D + + ++ EEF L + YRVV+I +G L +A +K D+EA
Sbjct: 278 DKVEMFSFARPEDTAAEHL--RLLAWEEEFLQALELPYRVVDIAAGDLGTSATRKYDIEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKIYATACATTRVICAILETH 190
WFP G +REL S S+C +Q+RRL +RY G+T+ + T CA R I +LE H
Sbjct: 336 WFPSQGTYRELTSTSDCTTFQARRLNIRYRDDDGKTQIAATLNGTLCAIARTIACLLEVH 395
Query: 191 QTETG-VRIPDCLRKFVPAV 209
Q G V +P LR ++ V
Sbjct: 396 QQADGSVHVPVALRPWLGGV 415
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 87/154 (56%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVH F+KVE F P D + ++ EEF L + YRVV+I +G L
Sbjct: 267 DTRGIIRVHWFDKVEMFSFARPEDTAAEHL--RLLAWEEEFLQALELPYRVVDIAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D+EAWFP G +REL S S+C +Q+RRL +RY + + K + LN T
Sbjct: 325 TSATRKYDIEAWFPSQGTYRELTSTSDCTTFQARRLNIRY---RDDDGKTQIAATLNGTL 381
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
CA R I +LE HQ G V +P LR ++ V
Sbjct: 382 CAIARTIACLLEVHQQADGSVHVPVALRPWLGGV 415
Score = 40.8 bits (94), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + +H L ++ P RY G S+CFR+E
Sbjct: 218 ERDDLYLVGTSEVALAGMHSGEVLELSAGPKRYAGWSSCFRREA 261
>gi|298530167|ref|ZP_07017569.1| seryl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
gi|298509541|gb|EFI33445.1| seryl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
Length = 425
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 117/196 (59%), Gaps = 10/196 (5%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YLI T+E P+ +HR L E LP+ Y + CFR E GSHG+DTRGI R HQF KVE
Sbjct: 226 YLIPTAEVPLTNIHRGEVLQEDQLPLAYTAFTGCFRSEAGSHGKDTRGIIRQHQFNKVE- 284
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
++ H D+S+K L+ ++ ++EE LG+ YRVVN+ +G L AAK D+E W PG
Sbjct: 285 -LVRFAHPDDSFKQLELLLGHAEEILKRLGLHYRVVNLCTGDLGFGAAKTYDIEVWLPGQ 343
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQTET 194
G +RE+ SCSN D+Q+RR +R+ ++K + + A R + AI+E Q +
Sbjct: 344 GKYREISSCSNFTDFQARRGDIRFKPAQEKKSRLVHTLNGSGLAVGRALVAIMENCQQKD 403
Query: 195 G-VRIPDCLRKFVPAV 209
G + IP+ LR + +
Sbjct: 404 GSIVIPEVLRPYTGGM 419
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI R HQF KVE ++ H D+S+K L+ ++ ++EE LG+ YRVVN+ +G L
Sbjct: 270 DTRGIIRQHQFNKVE--LVRFAHPDDSFKQLELLLGHAEEILKRLGLHYRVVNLCTGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK D+E W PG G +RE+ SCSN +Q+RR +R+ ++ +K VH LN +
Sbjct: 328 FGAAKTYDIEVWLPGQGKYREISSCSNFTDFQARRGDIRFKPAQE--KKSRLVHTLNGSG 385
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
A R + AI+E Q + G + IP+ LR + + +
Sbjct: 386 LAVGRALVAIMENCQQKDGSIVIPEVLRPYTGGMDI 421
>gi|449437300|ref|XP_004136430.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
Length = 539
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 125/210 (59%), Gaps = 22/210 (10%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+ LI T+E P+ +H DS L E+SLP++Y+ S CFR E G+ G TRG++RVHQF
Sbjct: 321 EGSDQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQF 380
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVE F+ P + ES+ +E+I+ E+ ++ LG+ ++ +++ S L A +K D+EA
Sbjct: 381 SKVEMFIFCRPEESESYH--EELIRIEEDLFSSLGLHFKTLDMASADLGAPAYRKFDVEA 438
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-------------------KIYATAC 177
W PG G + E+ S SNC DYQSRRL +RY +Q + ATAC
Sbjct: 439 WMPGLGRYGEISSASNCTDYQSRRLGIRYRPQEQVPSTLKKGKGNLAPTQFVHTLNATAC 498
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFV 206
A R++ +LE +Q E G V IP+ LR F+
Sbjct: 499 AVPRMMVCLLENYQQEDGSVIIPEPLRPFM 528
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 99/160 (61%), Gaps = 13/160 (8%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
TRG++RVHQF KVE F+ P + ES+ +E+I+ E+ ++ LG+ ++ +++ S L
Sbjct: 371 TRGLYRVHQFSKVEMFIFCRPEESESYH--EELIRIEEDLFSSLGLHFKTLDMASADLGA 428
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI----------E 413
A +K D+EAW PG G + E+ S SNC YQSRRL +RY +++ + +
Sbjct: 429 PAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQEQVPSTLKKGKGNLAPTQ 488
Query: 414 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
FVH LNATACA R++ +LE +Q E G V IP+ LR F+
Sbjct: 489 FVHTLNATACAVPRMMVCLLENYQQEDGSVIIPEPLRPFM 528
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
E D+ LI T+E P+ +H DS L E+SLP++Y+ S CFR E
Sbjct: 321 EGSDQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTE 363
>gi|406574679|ref|ZP_11050403.1| seryl-tRNA ligase [Janibacter hoylei PVAS-1]
gi|404555893|gb|EKA61371.1| seryl-tRNA ligase [Janibacter hoylei PVAS-1]
Length = 443
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL TSE + H D L P+RY STC+R+E GS+G+DTRGIFRVHQF+K
Sbjct: 242 DDLYLTGTSEVALAGYHADEILDLRDGPLRYAATSTCYRREAGSYGKDTRGIFRVHQFQK 301
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
E FV P D ++ D +++ L + YRV+++ +G L A++K D EAW
Sbjct: 302 TEMFVFCRPEDAQAEH--DNLLRIERRVLEALELPYRVIDVAAGDLGGPASRKYDCEAWV 359
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQ-------TKQKIYATACATTRVICAILETHQ 191
P G++REL S SNC +Q+RRL +R Q T + TA +TR I AILE HQ
Sbjct: 360 PTQGSYRELTSTSNCTTFQARRLRIRERQADGGGTRTVATLNGTAITSTRPIVAILENHQ 419
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L+ F+
Sbjct: 420 QADGSVRVPSALQPFL 435
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+K E FV P D ++ D +++ L + YRV+++ +G L
Sbjct: 289 DTRGIFRVHQFQKTEMFVFCRPEDAQAEH--DNLLRIERRVLEALELPYRVIDVAAGDLG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A++K D EAW P G++REL S SNC +Q+RRL +R Q + V LN TA
Sbjct: 347 GPASRKYDCEAWVPTQGSYRELTSTSNCTTFQARRLRIRERQADGGGTRT--VATLNGTA 404
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TR I AILE HQ G VR+P L+ F+
Sbjct: 405 ITSTRPIVAILENHQQADGSVRVPSALQPFL 435
>gi|339449235|ref|ZP_08652791.1| seryl-tRNA synthetase [Lactobacillus fructivorans KCTC 3543]
Length = 429
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +I T+E P+ +RD +PEA LP+++ ++ FR E GS G+DTRG+ R+HQF KV
Sbjct: 226 DLTMIPTAEVPLVNFYRDEVIPEAKLPVKFTALTPAFRSEAGSAGKDTRGLIRLHQFNKV 285
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P DESW L+E+I +E LGI Y V+ + S ++ AA+ DLE W P
Sbjct: 286 EMVQFTKP--DESWDALEEIIHQAETLLQKLGIPYHVITLTSSDMSFTAAETHDLEVWMP 343
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTE 193
+RE+ SCSN LD+Q+RR ++Y K+ + A R + AILE +Q E
Sbjct: 344 AQNRYREISSCSNTLDFQARRAHIQYRDENGKLQYVHTLNGSGLAVGRTVAAILENYQNE 403
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ L+ ++
Sbjct: 404 DGTVNVPEVLQPYM 417
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 6/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R+HQF KVE T P DESW L+E+I +E LGI Y V+
Sbjct: 264 SEAGSAGKDTRGLIRLHQFNKVEMVQFTKP--DESWDALEEIIHQAETLLQKLGIPYHVI 321
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ S ++ AA+ DLE W P +RE+ SCSN L +Q+RR ++Y + N K+++
Sbjct: 322 TLTSSDMSFTAAETHDLEVWMPAQNRYREISSCSNTLDFQARRAHIQY---RDENGKLQY 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH LN + A R + AILE +Q E G V +P+ L+ ++
Sbjct: 379 VHTLNGSGLAVGRTVAAILENYQNEDGTVNVPEVLQPYM 417
>gi|38234776|ref|NP_940543.1| seryl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
gi|81829836|sp|Q6NEN2.1|SYS_CORDI RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|38201040|emb|CAE50764.1| seryl-tRNA synthetase [Corynebacterium diphtheriae]
Length = 419
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +E+ ++ E A + + YR++++ G L +AA+K D EA
Sbjct: 277 DKLEMFVYCKP--EEAVAQHQALLNMEREMLAAVEVPYRIIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K + A ATTR + AILE +Q
Sbjct: 335 WIPTQNTYRELTSTSNCTTFQARRLRTRYRDESGKAHTAATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVIVPEALRPFV 410
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +E+ ++ E A + + YR++++ G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCKP--EEAVAQHQALLNMEREMLAAVEVPYRIIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K LN T
Sbjct: 324 SSAARKFDTEAWIPTQNTYRELTSTSNCTTFQARRLRTRY---RDESGKAHTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVIVPEALRPFV 410
Score = 44.3 bits (103), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREA 260
>gi|449497050|ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
Length = 563
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 125/210 (59%), Gaps = 22/210 (10%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+ LI T+E P+ +H DS L E+SLP++Y+ S CFR E G+ G TRG++RVHQF
Sbjct: 345 EGSDQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQF 404
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVE F+ P + ES+ +E+I+ E+ ++ LG+ ++ +++ S L A +K D+EA
Sbjct: 405 SKVEMFIFCRPEESESYH--EELIRIEEDLFSSLGLHFKTLDMASADLGAPAYRKFDVEA 462
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-------------------KIYATAC 177
W PG G + E+ S SNC DYQSRRL +RY +Q + ATAC
Sbjct: 463 WMPGLGRYGEISSASNCTDYQSRRLGIRYRPQEQVPSTLKKGKGNLAPTQFVHTLNATAC 522
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFV 206
A R++ +LE +Q E G V IP+ LR F+
Sbjct: 523 AVPRMMVCLLENYQQEDGSVIIPEPLRPFM 552
Score = 132 bits (333), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 99/160 (61%), Gaps = 13/160 (8%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
TRG++RVHQF KVE F+ P + ES+ +E+I+ E+ ++ LG+ ++ +++ S L
Sbjct: 395 TRGLYRVHQFSKVEMFIFCRPEESESYH--EELIRIEEDLFSSLGLHFKTLDMASADLGA 452
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKI----------E 413
A +K D+EAW PG G + E+ S SNC YQSRRL +RY +++ + +
Sbjct: 453 PAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQEQVPSTLKKGKGNLAPTQ 512
Query: 414 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
FVH LNATACA R++ +LE +Q E G V IP+ LR F+
Sbjct: 513 FVHTLNATACAVPRMMVCLLENYQQEDGSVIIPEPLRPFM 552
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
E D+ LI T+E P+ +H DS L E+SLP++Y+ S CFR E
Sbjct: 345 EGSDQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTE 387
>gi|376294205|ref|YP_005165879.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC02]
gi|372111528|gb|AEX77588.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC02]
Length = 419
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +E+ ++ E A + + YR++++ G L +AA+K D EA
Sbjct: 277 DKLEMFVYCKP--EEAVAQHQALLNMEREMLAAVEVPYRIIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K + A ATTR + AILE +Q
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLRTRYRDESGKAHTAATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVIVPEALRPFV 410
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +E+ ++ E A + + YR++++ G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCKP--EEAVAQHQALLNMEREMLAAVEVPYRIIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K LN T
Sbjct: 324 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLRTRY---RDESGKAHTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVIVPEALRPFV 410
Score = 44.3 bits (103), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREA 260
>gi|227489079|ref|ZP_03919395.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227543355|ref|ZP_03973404.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227090960|gb|EEI26272.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227180860|gb|EEI61832.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 418
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 119/199 (59%), Gaps = 12/199 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D++YL+ TSE + H D + + P+ Y G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 219 DNQYLVGTSEVALAGYHSDEIIDLSQGPLHYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+E FV P D E+ ++ ++ A + + YR+++I G L +AA+K D EAW
Sbjct: 279 LEMFVYCKPEDAEAQHQ--ALLAMEKDMLAAIEVPYRIIDIAGGDLGSSAARKFDTEAWI 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQKIYAT---ACATTRVICAILETHQ 191
P +REL S SNC +Q+RRL +RY G+T +I AT ATTR + AILE HQ
Sbjct: 337 PTQNTYRELTSTSNCTTFQARRLKIRYRDEDGRT--QIAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFVPAV 209
G V IP LR F+ +
Sbjct: 395 QADGSVIIPAALRPFMGGI 413
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D E+ ++ ++ A + + YR+++I G L
Sbjct: 266 DTRGIIRVHQFDKLEMFVYCKPEDAEAQHQA--LLAMEKDMLAAIEVPYRIIDIAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL +RY + + + + LN T
Sbjct: 324 SSAARKFDTEAWIPTQNTYRELTSTSNCTTFQARRLKIRY---RDEDGRTQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR + AILE HQ G V IP LR F+ +
Sbjct: 380 LATTRWLVAILENHQQADGSVIIPAALRPFMGGI 413
>gi|419539785|ref|ZP_14079032.1| seryl-tRNA synthetase [Campylobacter coli Z163]
gi|419552550|ref|ZP_14090853.1| seryl-tRNA synthetase [Campylobacter coli 2692]
gi|419553946|ref|ZP_14092099.1| seryl-tRNA synthetase [Campylobacter coli 2698]
gi|419569667|ref|ZP_14106725.1| seryl-tRNA synthetase [Campylobacter coli 7--1]
gi|419604098|ref|ZP_14138572.1| seryl-tRNA synthetase [Campylobacter coli LMG 9853]
gi|419610571|ref|ZP_14144632.1| seryl-tRNA synthetase [Campylobacter coli H8]
gi|419612134|ref|ZP_14146016.1| seryl-tRNA synthetase [Campylobacter coli H9]
gi|419613862|ref|ZP_14147656.1| seryl-tRNA synthetase [Campylobacter coli H56]
gi|419616866|ref|ZP_14150501.1| seryl-tRNA synthetase [Campylobacter coli Z156]
gi|380518803|gb|EIA44894.1| seryl-tRNA synthetase [Campylobacter coli Z163]
gi|380531195|gb|EIA56227.1| seryl-tRNA synthetase [Campylobacter coli 2692]
gi|380533588|gb|EIA58510.1| seryl-tRNA synthetase [Campylobacter coli 2698]
gi|380548917|gb|EIA72806.1| seryl-tRNA synthetase [Campylobacter coli 7--1]
gi|380580749|gb|EIB02486.1| seryl-tRNA synthetase [Campylobacter coli LMG 9853]
gi|380589760|gb|EIB10801.1| seryl-tRNA synthetase [Campylobacter coli H8]
gi|380591010|gb|EIB12008.1| seryl-tRNA synthetase [Campylobacter coli H9]
gi|380593755|gb|EIB14575.1| seryl-tRNA synthetase [Campylobacter coli H56]
gi|380594780|gb|EIB15556.1| seryl-tRNA synthetase [Campylobacter coli Z156]
Length = 411
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI+TSE P+ ++ L SLPI+ S CFR+E GS GRDTRGI R H
Sbjct: 215 KIEDEDLYLISTSEIPVTNLYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSITKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P +RE+ S SNC D+Q+RR +RY K K + ++ A R + AI+E
Sbjct: 333 EVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G ++IPD L+K+
Sbjct: 393 NYQDKEGRIQIPDVLKKY 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W P +RE+ S SNC +Q+RR +RY K N E VH LN
Sbjct: 321 DLGFSAAKTIDLEVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G ++IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGRIQIPDVLKKY 410
>gi|57168528|ref|ZP_00367661.1| seryl-tRNA synthetase [Campylobacter coli RM2228]
gi|305432945|ref|ZP_07402103.1| serine--tRNA ligase [Campylobacter coli JV20]
gi|419543735|ref|ZP_14082712.1| seryl-tRNA synthetase [Campylobacter coli 2553]
gi|419546124|ref|ZP_14084886.1| seryl-tRNA synthetase [Campylobacter coli 2680]
gi|419548067|ref|ZP_14086700.1| seryl-tRNA synthetase [Campylobacter coli 2685]
gi|419550448|ref|ZP_14088953.1| seryl-tRNA synthetase [Campylobacter coli 2688]
gi|419555821|ref|ZP_14093826.1| seryl-tRNA synthetase [Campylobacter coli 84-2]
gi|419557605|ref|ZP_14095510.1| seryl-tRNA synthetase [Campylobacter coli 80352]
gi|419560039|ref|ZP_14097690.1| seryl-tRNA synthetase [Campylobacter coli 86119]
gi|419562539|ref|ZP_14100046.1| seryl-tRNA synthetase [Campylobacter coli 1091]
gi|419564549|ref|ZP_14101927.1| seryl-tRNA synthetase [Campylobacter coli 1098]
gi|419565670|ref|ZP_14102942.1| seryl-tRNA synthetase [Campylobacter coli 1148]
gi|419567796|ref|ZP_14104949.1| seryl-tRNA synthetase [Campylobacter coli 1417]
gi|419573827|ref|ZP_14110613.1| seryl-tRNA synthetase [Campylobacter coli 1891]
gi|419575912|ref|ZP_14112587.1| seryl-tRNA synthetase [Campylobacter coli 1909]
gi|419577499|ref|ZP_14114052.1| seryl-tRNA synthetase [Campylobacter coli 59-2]
gi|419579050|ref|ZP_14115470.1| seryl-tRNA synthetase [Campylobacter coli 1948]
gi|419581140|ref|ZP_14117449.1| seryl-tRNA synthetase [Campylobacter coli 1957]
gi|419582942|ref|ZP_14119134.1| seryl-tRNA synthetase [Campylobacter coli 1961]
gi|419590695|ref|ZP_14126059.1| seryl-tRNA synthetase [Campylobacter coli 37/05]
gi|419592476|ref|ZP_14127724.1| seryl-tRNA synthetase [Campylobacter coli LMG 9854]
gi|419594435|ref|ZP_14129563.1| seryl-tRNA synthetase [Campylobacter coli LMG 23336]
gi|419596414|ref|ZP_14131419.1| seryl-tRNA synthetase [Campylobacter coli LMG 23341]
gi|419598231|ref|ZP_14133116.1| seryl-tRNA synthetase [Campylobacter coli LMG 23342]
gi|419600031|ref|ZP_14134806.1| seryl-tRNA synthetase [Campylobacter coli LMG 23344]
gi|419602909|ref|ZP_14137476.1| seryl-tRNA synthetase [Campylobacter coli 151-9]
gi|419606855|ref|ZP_14141209.1| seryl-tRNA synthetase [Campylobacter coli LMG 9860]
gi|419607947|ref|ZP_14142149.1| seryl-tRNA synthetase [Campylobacter coli H6]
gi|57020033|gb|EAL56710.1| seryl-tRNA synthetase [Campylobacter coli RM2228]
gi|304444099|gb|EFM36754.1| serine--tRNA ligase [Campylobacter coli JV20]
gi|380523066|gb|EIA48726.1| seryl-tRNA synthetase [Campylobacter coli 2680]
gi|380526319|gb|EIA51786.1| seryl-tRNA synthetase [Campylobacter coli 2553]
gi|380527923|gb|EIA53263.1| seryl-tRNA synthetase [Campylobacter coli 2685]
gi|380530610|gb|EIA55677.1| seryl-tRNA synthetase [Campylobacter coli 2688]
gi|380535534|gb|EIA60234.1| seryl-tRNA synthetase [Campylobacter coli 84-2]
gi|380537720|gb|EIA62262.1| seryl-tRNA synthetase [Campylobacter coli 86119]
gi|380540718|gb|EIA65015.1| seryl-tRNA synthetase [Campylobacter coli 1091]
gi|380541685|gb|EIA65939.1| seryl-tRNA synthetase [Campylobacter coli 80352]
gi|380542138|gb|EIA66380.1| seryl-tRNA synthetase [Campylobacter coli 1098]
gi|380547276|gb|EIA71199.1| seryl-tRNA synthetase [Campylobacter coli 1417]
gi|380548590|gb|EIA72490.1| seryl-tRNA synthetase [Campylobacter coli 1148]
gi|380550608|gb|EIA74250.1| seryl-tRNA synthetase [Campylobacter coli 1891]
gi|380552608|gb|EIA76164.1| seryl-tRNA synthetase [Campylobacter coli 1909]
gi|380557207|gb|EIA80426.1| seryl-tRNA synthetase [Campylobacter coli 59-2]
gi|380558163|gb|EIA81349.1| seryl-tRNA synthetase [Campylobacter coli 1948]
gi|380559871|gb|EIA82999.1| seryl-tRNA synthetase [Campylobacter coli 1957]
gi|380564347|gb|EIA87157.1| seryl-tRNA synthetase [Campylobacter coli 1961]
gi|380570298|gb|EIA92726.1| seryl-tRNA synthetase [Campylobacter coli 37/05]
gi|380572183|gb|EIA94517.1| seryl-tRNA synthetase [Campylobacter coli LMG 9854]
gi|380576035|gb|EIA98096.1| seryl-tRNA synthetase [Campylobacter coli LMG 23336]
gi|380576460|gb|EIA98516.1| seryl-tRNA synthetase [Campylobacter coli LMG 23341]
gi|380577436|gb|EIA99449.1| seryl-tRNA synthetase [Campylobacter coli LMG 23342]
gi|380580066|gb|EIB01835.1| seryl-tRNA synthetase [Campylobacter coli 151-9]
gi|380583631|gb|EIB05158.1| seryl-tRNA synthetase [Campylobacter coli LMG 23344]
gi|380586243|gb|EIB07549.1| seryl-tRNA synthetase [Campylobacter coli H6]
gi|380586525|gb|EIB07819.1| seryl-tRNA synthetase [Campylobacter coli LMG 9860]
Length = 411
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI+TSE P+ ++ L SLPI+ S CFR+E GS GRDTRGI R H
Sbjct: 215 KIEDEDLYLISTSEIPVTNLYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSITKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P +RE+ S SNC D+Q+RR +RY K K + ++ A R + AI+E
Sbjct: 333 EVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G ++IPD L+K+
Sbjct: 393 NYQDKEGRIQIPDVLKKY 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W P +RE+ S SNC +Q+RR +RY K N E VH LN
Sbjct: 321 DLGFSAAKTIDLEVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G ++IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGRIQIPDVLKKY 410
>gi|453073309|ref|ZP_21976262.1| seryl-tRNA ligase [Rhodococcus qingshengii BKS 20-40]
gi|226182800|dbj|BAH30904.1| seryl-tRNA synthetase [Rhodococcus erythropolis PR4]
gi|452756620|gb|EME15034.1| seryl-tRNA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 417
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 111/194 (57%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPMAGYHSGEILELNEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D ++ ++ + A + + YRV+++ G L +AA+K D EAW
Sbjct: 280 VEMFTYCRPEDADAEHQ--RLLGWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P G +REL S SNC +Q+RRL VRY K A ATTR I +ILE HQ
Sbjct: 338 PTQGTYRELTSTSNCTTFQARRLGVRYRDENGKPQTAATLNGTLATTRWIVSILENHQQA 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ L FV
Sbjct: 398 DGSVRVPEALVPFV 411
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ ++ + A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFTYCRPEDADAEHQ--RLLGWERDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I +ILE HQ G VR+P+ L FV
Sbjct: 381 LATTRWIVSILENHQQADGSVRVPEALVPFV 411
>gi|448822824|ref|YP_007415987.1| seryl-tRNA synthetase [Corynebacterium urealyticum DSM 7111]
gi|448276321|gb|AGE35745.1| seryl-tRNA synthetase [Corynebacterium urealyticum DSM 7111]
Length = 422
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 119/196 (60%), Gaps = 9/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H D + + P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 221 EEDDLYLVGTSEVALAGYHSDEII-DLDEPKRYAGWSSCFRREAGSYGKDTRGIIRVHQF 279
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +++ ++ E++Q ++ A + + YRV++ G L +AA+K D EA
Sbjct: 280 DKLEMFVYCRP--EQATEIHQELLQLEKDMLAAIDVPYRVIDTAGGDLGSSAARKFDTEA 337
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K ++ AT ATTR + AILE HQ
Sbjct: 338 WVPTQNTYRELTSTSNCTTFQARRLQTRYRDADGKTQVAATLNGTLATTRWLVAILENHQ 397
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 398 QADGSVVVPEALRPFV 413
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +++ + E++Q ++ A + + YRV++ G L
Sbjct: 269 DTRGIIRVHQFDKLEMFVYCRP--EQATEIHQELLQLEKDMLAAIDVPYRVIDTAGGDLG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 327 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLQTRY---RDADGKTQVAATLNGT- 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P+ LR FV
Sbjct: 383 LATTRWLVAILENHQQADGSVVVPEALRPFV 413
>gi|444920028|ref|ZP_21239872.1| Serine--tRNA ligase [Wohlfahrtiimonas chitiniclastica SH04]
gi|444508895|gb|ELV09063.1| Serine--tRNA ligase [Wohlfahrtiimonas chitiniclastica SH04]
Length = 423
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 122/202 (60%), Gaps = 15/202 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ YLI T+E P+ + R +PE+ LP++++ S CFR E GS+GRDTRG+ R+HQFEK
Sbjct: 224 DEYYLIPTAEVPVTNLVRGEIVPESDLPLQFVAHSGCFRSEAGSYGRDTRGLIRMHQFEK 283
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE L P D+S++ L+ M +++E LG+ YR + + +G + A K D+E W
Sbjct: 284 VEMVHLAHP--DKSFEQLELMTRHAETVLEKLGLPYRTIVLCTGDMGFGATKTYDIEVWL 341
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAILETHQ 191
PG +RE+ SCSNCLD+Q+RR+ R+ + + + A R + A++E +Q
Sbjct: 342 PGQEKYREISSCSNCLDFQARRMQARFRNSDTNKPELLHTLNGSGLAVGRTLVAVMENYQ 401
Query: 192 TETG-VRIPDCLRKFVPAVYLN 212
E G +RIP+ L VP Y+N
Sbjct: 402 EEDGRIRIPEVL---VP--YMN 418
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R+HQFEKVE L P D+S++ L+ M +++E LG+ YR + + +G +
Sbjct: 271 DTRGLIRMHQFEKVEMVHLAHP--DKSFEQLELMTRHAETVLEKLGLPYRTIVLCTGDMG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A K D+E W PG +RE+ SCSNCL +Q+RR+ R+ + K E +H LN +
Sbjct: 329 FGATKTYDIEVWLPGQEKYREISSCSNCLDFQARRMQARFRNSD--TNKPELLHTLNGSG 386
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + A++E +Q E G +RIP+ L ++
Sbjct: 387 LAVGRTLVAVMENYQEEDGRIRIPEVLVPYM 417
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+ YLI T+E P+ + R +PE+ LP++++ S CFR E +
Sbjct: 224 DEYYLIPTAEVPVTNLVRGEIVPESDLPLQFVAHSGCFRSEAGS 267
>gi|311064846|ref|YP_003971572.1| sers seryl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
gi|313140917|ref|ZP_07803110.1| seryl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
gi|390937399|ref|YP_006394958.1| seryl-tRNA synthetase [Bifidobacterium bifidum BGN4]
gi|310867166|gb|ADP36535.1| SerS Seryl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
gi|313133427|gb|EFR51044.1| seryl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
gi|389891012|gb|AFL05079.1| seryl-tRNA synthetase [Bifidobacterium bifidum BGN4]
Length = 428
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D++YL+ TSE + +H + L ++ P+RY G S+C+R+E G+ G+DT GI RVHQF
Sbjct: 222 EPDEQYLVGTSEVALAGMHENEILDLSNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV T D S+K ++ EE A + + YRV++ +G L +AA+K D EA
Sbjct: 282 DKVEMFVYTKQED--SYKEHQHLLSMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDTEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +YQ+RRL +R A + ATTR + AILE HQ
Sbjct: 340 WIPTQGRYRELTSTSNCTEYQARRLNIRERNEDGSTRAVSTLNGTLATTRWLVAILENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
+ G + IP +R ++
Sbjct: 400 QKDGSIEIPQAMRPYM 415
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF+KVE FV T D S+K ++ EE A + + YRV++ +G
Sbjct: 268 AGKDTSGIIRVHQFDKVEMFVYTKQED--SYKEHQHLLSMEEEMLAKVEVPYRVIDTAAG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AA+K D EAW P G +REL S SNC YQ+RRL +R + + V LN
Sbjct: 326 DLGSSAARKFDTEAWIPTQGRYRELTSTSNCTEYQARRLNIR---ERNEDGSTRAVSTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
T ATTR + AILE HQ + G + IP +R ++ V E
Sbjct: 383 GT-LATTRWLVAILENHQQKDGSIEIPQAMRPYMGGKEVIE 422
Score = 43.5 bits (101), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E D++YL+ TSE + +H + L ++ P+RY G S+C+R+E A
Sbjct: 222 EPDEQYLVGTSEVALAGMHENEILDLSNGPLRYCGWSSCYRREAGA 267
>gi|421734751|ref|ZP_16173810.1| seryl-tRNA ligase [Bifidobacterium bifidum LMG 13195]
gi|421737513|ref|ZP_16176090.1| seryl-tRNA ligase [Bifidobacterium bifidum IPLA 20015]
gi|407077325|gb|EKE50172.1| seryl-tRNA ligase [Bifidobacterium bifidum LMG 13195]
gi|407295199|gb|EKF15004.1| seryl-tRNA ligase [Bifidobacterium bifidum IPLA 20015]
Length = 428
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D++YL+ TSE + +H + L ++ P+RY G S+C+R+E G+ G+DT GI RVHQF
Sbjct: 222 EPDEQYLVGTSEVALAGMHENEILDLSNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV T D S+K ++ EE A + + YRV++ +G L +AA+K D EA
Sbjct: 282 DKVEMFVYTKQED--SYKEHQHLLSMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDTEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +YQ+RRL +R A + ATTR + AILE HQ
Sbjct: 340 WIPTQGRYRELTSTSNCTEYQARRLNIRERNEDGSTRAVSTLNGTLATTRWLVAILENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
+ G + IP +R ++
Sbjct: 400 QKDGSIEIPQAMRPYM 415
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF+KVE FV T D S+K ++ EE A + + YRV++ +G
Sbjct: 268 AGKDTSGIIRVHQFDKVEMFVYTKQED--SYKEHQHLLSMEEEMLAKVEVPYRVIDTAAG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AA+K D EAW P G +REL S SNC YQ+RRL +R + + V LN
Sbjct: 326 DLGSSAARKFDTEAWIPTQGRYRELTSTSNCTEYQARRLNIR---ERNEDGSTRAVSTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
T ATTR + AILE HQ + G + IP +R ++ V E
Sbjct: 383 GT-LATTRWLVAILENHQQKDGSIEIPQAMRPYMGGKEVIE 422
Score = 43.5 bits (101), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E D++YL+ TSE + +H + L ++ P+RY G S+C+R+E A
Sbjct: 222 EPDEQYLVGTSEVALAGMHENEILDLSNGPLRYCGWSSCYRREAGA 267
>gi|375291844|ref|YP_005126384.1| seryl-tRNA synthetase [Corynebacterium diphtheriae 241]
gi|375294038|ref|YP_005128578.1| seryl-tRNA synthetase [Corynebacterium diphtheriae INCA 402]
gi|376243810|ref|YP_005134662.1| seryl-tRNA synthetase [Corynebacterium diphtheriae CDCE 8392]
gi|376246680|ref|YP_005136919.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC01]
gi|376249513|ref|YP_005141457.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC04]
gi|376252284|ref|YP_005139165.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC03]
gi|376258059|ref|YP_005145950.1| seryl-tRNA synthetase [Corynebacterium diphtheriae VA01]
gi|376285748|ref|YP_005158958.1| seryl-tRNA synthetase [Corynebacterium diphtheriae 31A]
gi|376288738|ref|YP_005161304.1| seryl-tRNA synthetase [Corynebacterium diphtheriae BH8]
gi|419861719|ref|ZP_14384344.1| seryl-tRNA synthetase [Corynebacterium diphtheriae bv. intermedius
str. NCTC 5011]
gi|371579263|gb|AEX42931.1| seryl-tRNA synthetase [Corynebacterium diphtheriae 31A]
gi|371581515|gb|AEX45182.1| seryl-tRNA synthetase [Corynebacterium diphtheriae 241]
gi|371583710|gb|AEX47376.1| seryl-tRNA synthetase [Corynebacterium diphtheriae INCA 402]
gi|371586072|gb|AEX49737.1| seryl-tRNA synthetase [Corynebacterium diphtheriae BH8]
gi|372107052|gb|AEX73114.1| seryl-tRNA synthetase [Corynebacterium diphtheriae CDCE 8392]
gi|372109310|gb|AEX75371.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC01]
gi|372113788|gb|AEX79847.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC03]
gi|372116081|gb|AEX82139.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC04]
gi|372120576|gb|AEX84310.1| seryl-tRNA synthetase [Corynebacterium diphtheriae VA01]
gi|387981823|gb|EIK55362.1| seryl-tRNA synthetase [Corynebacterium diphtheriae bv. intermedius
str. NCTC 5011]
Length = 419
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +E+ ++ E A + + YR++++ G L +AA+K D EA
Sbjct: 277 DKLEMFVYCKP--EEAVAQHQALLNMEREMLAAVEVPYRIIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K + A ATTR + AILE +Q
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLRTRYRDESGKAHTAATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVIVPEALRPFV 410
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +E+ ++ E A + + YR++++ G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCKP--EEAVAQHQALLNMEREMLAAVEVPYRIIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K LN T
Sbjct: 324 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLRTRY---RDESGKAHTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVIVPEALRPFV 410
Score = 44.3 bits (103), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREA 260
>gi|120406601|ref|YP_956430.1| seryl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
gi|166222752|sp|A1TGX4.1|SYS_MYCVP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119959419|gb|ABM16424.1| seryl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
Length = 419
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H L + P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHSGEILDLSEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P + E+ D ++ + + + YRV++I +G L +AA+K D EA
Sbjct: 277 DKVEGFVYCRPEEAEAEH--DRLLGWQRQMLGLIEVPYRVIDIAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL VRY K A ATTR + AILE HQ
Sbjct: 335 WVPTQQTYRELTSTSNCTTFQARRLGVRYRDENGKPQTAATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VRIP+ L +V
Sbjct: 395 QPDGSVRIPEALVPYV 410
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P + E+ D ++ + + + YRV++I +G L
Sbjct: 266 DTRGIIRVHQFDKVEGFVYCRPEEAEAEH--DRLLGWQRQMLGLIEVPYRVIDIAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 SSAARKFDCEAWVPTQQTYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VRIP+ L +V
Sbjct: 380 LATTRWLVAILENHQQPDGSVRIPEALVPYV 410
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H L + P RY G S+CFR+E
Sbjct: 217 EADDLYLVGTSEVPLAGYHSGEILDLSEGPKRYAGWSSCFRREA 260
>gi|419537966|ref|ZP_14077329.1| seryl-tRNA synthetase [Campylobacter coli 90-3]
gi|380519141|gb|EIA45226.1| seryl-tRNA synthetase [Campylobacter coli 90-3]
Length = 411
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI+TSE P+ ++ L SLPI+ S CFR+E GS GRDTRGI R H
Sbjct: 215 KIEDEDLYLISTSEIPVTNLYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSITKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P +RE+ S SNC D+Q+RR +RY K K + ++ A R + AI+E
Sbjct: 333 EVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G ++IPD L+K+
Sbjct: 393 NYQDKEGRIQIPDVLKKY 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W P +RE+ S SNC +Q+RR +RY K N E VH LN
Sbjct: 321 DLGFSAAKTIDLEVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G ++IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGRIQIPDVLKKY 410
>gi|229494079|ref|ZP_04387846.1| seryl-tRNA synthetase [Rhodococcus erythropolis SK121]
gi|229319012|gb|EEN84866.1| seryl-tRNA synthetase [Rhodococcus erythropolis SK121]
Length = 417
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 111/194 (57%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPMAGYHSGEILELNEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D ++ ++ + A + + YRV+++ G L +AA+K D EAW
Sbjct: 280 VEMFTYCRPEDADAEHQ--RLLGWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P G +REL S SNC +Q+RRL VRY K A ATTR I +ILE HQ
Sbjct: 338 PTQGTYRELTSTSNCTTFQARRLGVRYRDENGKPQTAATLNGTLATTRWIVSILENHQQA 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P+ L FV
Sbjct: 398 DGSVRVPEALVPFV 411
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ ++ + A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFTYCRPEDADAEHQ--RLLGWERDMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I +ILE HQ G VR+P+ L FV
Sbjct: 381 LATTRWIVSILENHQQADGSVRVPEALVPFV 411
>gi|419536341|ref|ZP_14075823.1| seryl-tRNA synthetase [Campylobacter coli 111-3]
gi|419571382|ref|ZP_14108336.1| seryl-tRNA synthetase [Campylobacter coli 132-6]
gi|380518495|gb|EIA44590.1| seryl-tRNA synthetase [Campylobacter coli 111-3]
gi|380553740|gb|EIA77242.1| seryl-tRNA synthetase [Campylobacter coli 132-6]
Length = 411
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI+TSE P+ ++ L SLPI+ S CFR+E GS GRDTRGI R H
Sbjct: 215 KIEDEDLYLISTSEIPVTNLYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSITKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P +RE+ S SNC D+Q+RR +RY K K + ++ A R + AI+E
Sbjct: 333 EVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G ++IPD L+K+
Sbjct: 393 NYQDKEGRIQIPDVLKKY 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W P +RE+ S SNC +Q+RR +RY K N E VH LN
Sbjct: 321 DLGFSAAKTIDLEVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G ++IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGRIQIPDVLKKY 410
>gi|255323412|ref|ZP_05364543.1| seryl-tRNA synthetase [Campylobacter showae RM3277]
gi|255299449|gb|EET78735.1| seryl-tRNA synthetase [Campylobacter showae RM3277]
Length = 414
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 121/198 (61%), Gaps = 8/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K + +D YLI TSE P+ ++ D LP SLPI+ S CFR+E GS GRDTRG+ R H
Sbjct: 219 KAQGEDLYLIPTSEVPVTNLYNDEILPVESLPIKMTCYSACFRKEAGSAGRDTRGMIRQH 278
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE +T+P + S +MLDEM+ + + LG+ +R + + SG L +AAK +DL
Sbjct: 279 QFEKVELVAITTP--ELSAQMLDEMVACASDLLTSLGLPHRHMLLCSGDLGFSAAKTIDL 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-----IYATACATTRVICAILET 189
E W PG +RE+ S SN D+Q+RR +RY K+ + ++ A R + AI+E
Sbjct: 337 EVWLPGQNKYREISSVSNTRDFQARRAKIRYKDGKKNALVNTLNGSSLAVGRTLIAIMEN 396
Query: 190 HQTETG-VRIPDCLRKFV 206
+Q G + IP+ L++++
Sbjct: 397 YQKADGSIEIPEVLKRYM 414
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 7/154 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQFEKVE +T+P + S + LDEM+ + + LG+ +R + + SG
Sbjct: 267 AGRDTRGMIRQHQFEKVELVAITTP--ELSAQMLDEMVACASDLLTSLGLPHRHMLLCSG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SN +Q+RR +RY KK V+ LN
Sbjct: 325 DLGFSAAKTIDLEVWLPGQNKYREISSVSNTRDFQARRAKIRYKDGKKN----ALVNTLN 380
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
++ A R + AI+E +Q G + IP+ L++++
Sbjct: 381 GSSLAVGRTLIAIMENYQKADGSIEIPEVLKRYM 414
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K + +D YLI TSE P+ ++ D LP SLPI+ S CFR+E + GM R +
Sbjct: 219 KAQGEDLYLIPTSEVPVTNLYNDEILPVESLPIKMTCYSACFRKEAGSAGRDTRGMIRQH 278
>gi|330823695|ref|YP_004386998.1| seryl-tRNA synthetase [Alicycliphilus denitrificans K601]
gi|329309067|gb|AEB83482.1| Seryl-tRNA synthetase [Alicycliphilus denitrificans K601]
Length = 438
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 4 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSH 63
KG + G+ P+ +L YLI TSE P+ + RD L E+ LPIR S CFR E GS+
Sbjct: 226 KGGQEGEPVPDDAQL---YLIPTSEVPLTNIVRDEVLAESDLPIRLTAHSPCFRSEAGSY 282
Query: 64 GRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGA 123
GRDTRG+ R HQF+K+E + H D+S++ L+EM +++E LG+ YRVV++ +G
Sbjct: 283 GRDTRGMIRQHQFDKIEMVQIV--HPDKSYEALEEMTRHAEAILQKLGLPYRVVSLCTGD 340
Query: 124 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATAC 177
+ +AK DLE W P G +RE+ S SNC +Q+RR+ R+ + + + +
Sbjct: 341 MGFGSAKTYDLEVWLPAQGTYREISSVSNCEAFQARRMQARFKNAQGRNELVHTLNGSGL 400
Query: 178 ATTRVICAILET-HQTETGVRIPDCLRKFV 206
A R + A+LE Q + + IP+ LR ++
Sbjct: 401 AVGRTLVAVLENCQQADGSIAIPEVLRPYM 430
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+K+E + H D+S++ L+EM +++E LG+ YRVV++ +G +
Sbjct: 285 DTRGMIRQHQFDKIEMVQIV--HPDKSYEALEEMTRHAEAILQKLGLPYRVVSLCTGDMG 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK DLE W P G +RE+ S SNC A+Q+RR+ R+ + N E VH LN +
Sbjct: 343 FGSAKTYDLEVWLPAQGTYREISSVSNCEAFQARRMQARFKNAQGRN---ELVHTLNGSG 399
Query: 423 CATTRVICAILET-HQTETGVRIPDCLRKFV 452
A R + A+LE Q + + IP+ LR ++
Sbjct: 400 LAVGRTLVAVLENCQQADGSIAIPEVLRPYM 430
Score = 47.8 bits (112), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 520 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA- 578
KG + G+ P+ +L YLI TSE P+ + RD L E+ LPIR S CFR E +
Sbjct: 226 KGGQEGEPVPDDAQL---YLIPTSEVPLTNIVRDEVLAESDLPIRLTAHSPCFRSEAGSY 282
Query: 579 -----GMCRTY 584
GM R +
Sbjct: 283 GRDTRGMIRQH 293
>gi|311742239|ref|ZP_07716049.1| serine--tRNA ligase [Aeromicrobium marinum DSM 15272]
gi|311314732|gb|EFQ84639.1| serine--tRNA ligase [Aeromicrobium marinum DSM 15272]
Length = 426
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D L LP RY S CFR+E GSHGRDTRGIFRVH F
Sbjct: 221 EKDDLYLVGTSEVPLAAYHSDEILDPTILPRRYAAFSPCFRREAGSHGRDTRGIFRVHWF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F T+ D SW ++ E+ L + YRV+++ +G L +A +K D EA
Sbjct: 281 DKVEMFTYTTLED--SWDEHQRLLGWEREWLDLLELPYRVIDVATGDLGASAVRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYA-----TACATTRVICAILETHQ 191
W P G +RE+ S SNC ++Q+RRL R + A T CA TR I A+LE Q
Sbjct: 339 WVPTQGKYREVSSTSNCTEFQARRLDTRIRTESGTVPAATLNGTLCAMTRTIVALLENGQ 398
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAGEI 217
G VR+P L ++ V + G +
Sbjct: 399 QADGTVRLPAALHPWLGEVLVPIDGPV 425
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 86/162 (53%), Gaps = 7/162 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE F T+ D SW ++ E+ L + YRV+++ +G L
Sbjct: 270 DTRGIFRVHWFDKVEMFTYTTLED--SWDEHQRLLGWEREWLDLLELPYRVIDVATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P G +RE+ S SNC +Q+RRL R + LN T
Sbjct: 328 ASAVRKFDCEAWVPTQGKYREVSSTSNCTEFQARRLDTRI----RTESGTVPAATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEI 463
CA TR I A+LE Q G VR+P L ++ V V G +
Sbjct: 384 CAMTRTIVALLENGQQADGTVRLPAALHPWLGEVLVPIDGPV 425
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D L LP RY S CFR+E
Sbjct: 221 EKDDLYLVGTSEVPLAAYHSDEILDPTILPRRYAAFSPCFRREA 264
>gi|406971431|gb|EKD95516.1| hypothetical protein ACD_24C00461G0001, partial [uncultured
bacterium]
Length = 321
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 118/198 (59%), Gaps = 8/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D +LIAT+E + H + L +LP++Y G S+CFR E GS+G+D RGI RVH
Sbjct: 119 KVEGEDLHLIATAEITLVGQHANEILAAKTLPLKYAGFSSCFRVERGSYGKDVRGIIRVH 178
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
+F+KVE P ES K +E + EE + +L I Y+V+ I SG L AAAKK D+
Sbjct: 179 EFDKVEMVTFCKP--GESKKFHEEFLAIEEEIFQELKIPYQVILICSGDLGSAAAKKYDV 236
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILET 189
EAW P +RE+ S SN D+Q+RRL ++Y + I TACA R I AILE
Sbjct: 237 EAWVPSQNKYREVTSTSNTTDFQARRLNIKYKEKNATELLHTINGTACAIGRTIIAILEN 296
Query: 190 HQTETG-VRIPDCLRKFV 206
+Q G V IP+ L+ F+
Sbjct: 297 YQQSDGTVLIPEVLQPFL 314
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI RVH+F+KVE P ES K +E + EE + +L I Y+V+ I SG L
Sbjct: 170 DVRGIIRVHEFDKVEMVTFCKP--GESKKFHEEFLAIEEEIFQELKIPYQVILICSGDLG 227
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK D+EAW P +RE+ S SN +Q+RRL ++Y K E +H +N TA
Sbjct: 228 SAAAKKYDVEAWVPSQNKYREVTSTSNTTDFQARRLNIKY----KEKNATELLHTINGTA 283
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I AILE +Q G V IP+ L+ F+
Sbjct: 284 CAIGRTIIAILENYQQSDGTVLIPEVLQPFL 314
>gi|424867419|ref|ZP_18291221.1| Seryl-tRNA synthetase [Leptospirillum sp. Group II 'C75']
gi|206602909|gb|EDZ39389.1| Seryl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
gi|387222127|gb|EIJ76598.1| Seryl-tRNA synthetase [Leptospirillum sp. Group II 'C75']
Length = 442
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 123/196 (62%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ LI T+E P+ ++RDS L E LP++Y+ +TCFR+E G+ G+DTRG+ R HQF+K
Sbjct: 230 DNLVLIPTAEVPVTNLNRDSILEEEDLPVKYVASTTCFRREAGAAGKDTRGLIRQHQFQK 289
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +TSP D S+ L+E+ +++E+ A LG+ +R + + +G L ++AK DLE W
Sbjct: 290 VELVWVTSP--DTSYDDLEELTRDAEQILAGLGLPFRRIALCTGDLGFSSAKTYDLEVWM 347
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIYAT----ACATTRVICAILETHQ 191
P G +RE+ SCSN D+Q+RR +RY G K ++ T A R I AILE Q
Sbjct: 348 PAQGVYREISSCSNFEDFQARRAGIRYRPKGGGKPRLVHTMNGSGVAIGRTIAAILENFQ 407
Query: 192 TETG-VRIPDCLRKFV 206
+ G V IP+ LR ++
Sbjct: 408 EQDGSVVIPEVLRPYM 423
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 92/154 (59%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF+KVE +TSP D S+ L+E+ +++E+ A LG+ +R + + +G
Sbjct: 274 AGKDTRGLIRQHQFQKVELVWVTSP--DTSYDDLEELTRDAEQILAGLGLPFRRIALCTG 331
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L ++AK DLE W P G +RE+ SCSN +Q+RR +RY K K VH +N
Sbjct: 332 DLGFSSAKTYDLEVWMPAQGVYREISSCSNFEDFQARRAGIRY--RPKGGGKPRLVHTMN 389
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R I AILE Q + G V IP+ LR ++
Sbjct: 390 GSGVAIGRTIAAILENFQEQDGSVVIPEVLRPYM 423
Score = 47.4 bits (111), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+ LI T+E P+ ++RDS L E LP++Y+ +TCFR+E A
Sbjct: 230 DNLVLIPTAEVPVTNLNRDSILEEEDLPVKYVASTTCFRREAGA 273
>gi|406993037|gb|EKE12257.1| hypothetical protein ACD_13C00249G0021 [uncultured bacterium]
Length = 411
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 120/194 (61%), Gaps = 9/194 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D LIAT+E + H D +PE LP++Y+G S CFRQE G++G+ ++G++RVHQF K
Sbjct: 214 DLGLIATAEVTLAGAHSDEVIPEGKLPLKYVGYSHCFRQEAGAYGKYSKGLYRVHQFTKT 273
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E F+ P +ES K +E++ EE + DL I YRVV + +G L A++K D+EAW P
Sbjct: 274 EMFIYCKP--EESEKFHEEILSVEEEIFQDLEIPYRVVEMCTGDLGAMASRKFDIEAWMP 331
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKIYATACATTRVICAILETHQTE 193
G F E+ S SN DYQ+R L +R+ G+ + + TA +RV AILE Q +
Sbjct: 332 GRKDFGEVTSTSNVTDYQARNLNIRFRRDTGEMEYVHMLNGTAIVMSRVPLAILENFQEK 391
Query: 194 TG-VRIPDCLRKFV 206
G VRIP+ L+K++
Sbjct: 392 DGSVRIPEVLQKWM 405
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 95/150 (63%), Gaps = 6/150 (4%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF K E F+ P +ES K +E++ EE + DL I YRVV + +G L
Sbjct: 261 SKGLYRVHQFTKTEMFIYCKP--EESEKFHEEILSVEEEIFQDLEIPYRVVEMCTGDLGA 318
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 423
A++K D+EAW PG F E+ S SN YQ+R L +R+ ++ ++E+VHMLN TA
Sbjct: 319 MASRKFDIEAWMPGRKDFGEVTSTSNVTDYQARNLNIRF---RRDTGEMEYVHMLNGTAI 375
Query: 424 ATTRVICAILETHQTETG-VRIPDCLRKFV 452
+RV AILE Q + G VRIP+ L+K++
Sbjct: 376 VMSRVPLAILENFQEKDGSVRIPEVLQKWM 405
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D LIAT+E + H D +PE LP++Y+G S CFRQE A
Sbjct: 214 DLGLIATAEVTLAGAHSDEVIPEGKLPLKYVGYSHCFRQEAGA 256
>gi|407002925|gb|EKE19568.1| hypothetical protein ACD_8C00138G0011 [uncultured bacterium]
Length = 441
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 126/207 (60%), Gaps = 12/207 (5%)
Query: 9 GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTR 68
G+S+ E+ K+L+ T+E + A + D L LPI+ +G S C+R E+GS+G+DT+
Sbjct: 231 GESSKEQ-----KFLVGTAEPSLLAYYSDEVLNVEQLPIKIVGYSQCYRSEIGSYGKDTK 285
Query: 69 GIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 128
G +RVH+F KVEQ VL ++ S KM D+M++ S+E +A+LG+ YRV+ I SG ++
Sbjct: 286 GFYRVHEFMKVEQVVLMEADEEASIKMHDDMLEISKEVHAELGLPYRVLKICSGDMSAGK 345
Query: 129 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIYA---TACATTRV 182
+ D+EAW P +F E S SN LD+Q+RRL V+Y K+ +Y T + R
Sbjct: 346 FRAYDIEAWMPSRDSFGETGSASNFLDWQARRLNVKYMDANGEKKHVYMLNNTVLPSPRP 405
Query: 183 ICAILETHQTETG-VRIPDCLRKFVPA 208
AILE Q G V IP+ LRK++P
Sbjct: 406 FIAILENFQQADGSVVIPEVLRKYMPG 432
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G +RVH+F KVEQ VL ++ S K D+M++ S+E +A+LG+ YRV+ I SG ++
Sbjct: 283 DTKGFYRVHEFMKVEQVVLMEADEEASIKMHDDMLEISKEVHAELGLPYRVLKICSGDMS 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+ D+EAW P +F E S SN L +Q+RRL V+Y N + + V+MLN T
Sbjct: 343 AGKFRAYDIEAWMPSRDSFGETGSASNFLDWQARRLNVKYMDA---NGEKKHVYMLNNTV 399
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
+ R AILE Q G V IP+ LRK++P
Sbjct: 400 LPSPRPFIAILENFQQADGSVVIPEVLRKYMPG 432
Score = 41.2 bits (95), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 508 KERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG 567
KE ++ + EV K DS+ E + + K+L+ T+E + A + D L LPI+ +G
Sbjct: 210 KEYDSEVDEVYQVAGKDKDSSGESSK-EQKFLVGTAEPSLLAYYSDEVLNVEQLPIKIVG 268
Query: 568 VSTCFRQECDA------GMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADKL 621
S C+R E + G R + + Q +L EA E A ++H D L
Sbjct: 269 YSQCYRSEIGSYGKDTKGFYRVHEFMKVEQV--VLMEADEE---------ASIKMHDDML 317
Query: 622 E 622
E
Sbjct: 318 E 318
>gi|359426209|ref|ZP_09217295.1| seryl-tRNA synthetase [Gordonia amarae NBRC 15530]
gi|358238480|dbj|GAB06877.1| seryl-tRNA synthetase [Gordonia amarae NBRC 15530]
Length = 418
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 116/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L + P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 219 DDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ P D E+ +++ E A + + YRV+++ G L +A++K D EAW
Sbjct: 279 VEGFIYCKPEDAEAEHR--KLLGWEREMLAAIDVPYRVIDVAGGDLGSSASRKFDCEAWV 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL +RY K ++ AT ATTR + AILE HQ
Sbjct: 337 PTQNTYRELTSTSNCTTFQARRLSIRYRDENGKPQVAATLNGTLATTRWLVAILENHQQP 396
Query: 194 TG-VRIPDCLRKFV 206
G V +P L +FV
Sbjct: 397 DGSVVLPPELARFV 410
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F+ P D E+ +++ E A + + YRV+++ G L
Sbjct: 266 DTRGIIRVHQFDKVEGFIYCKPEDAEAEHR--KLLGWEREMLAAIDVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 324 SSASRKFDCEAWVPTQNTYRELTSTSNCTTFQARRLSIRY---RDENGKPQVAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P L +FV
Sbjct: 380 LATTRWLVAILENHQQPDGSVVLPPELARFV 410
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L + P RY G S+CFR+E
Sbjct: 219 DDLYLVGTSEVPLAGYHMDEILDLSDGPKRYAGWSSCFRREA 260
>gi|374673794|dbj|BAL51685.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis IO-1]
Length = 423
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LI T+E P+ +R L A LPI++ +S FR E GS GRDTRG+ R+HQF KVE
Sbjct: 228 LIPTAEVPLTNYYRGEILDGAELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 287
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
P D+S+ L++M N+E LG+AYRVV + +G + +AAK DLE W P
Sbjct: 288 KFAKP--DQSYDELEKMTANAENILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQN 345
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTETG- 195
+RE+ SCSNC D+Q+RR +RY + K+ + A R + AILE +Q E G
Sbjct: 346 TYREISSCSNCEDFQARRAQIRYRDEEGKVQLVHTLNGSGLAVGRTVAAILENYQNEDGS 405
Query: 196 VRIPDCLRKFVPAV 209
+ +P+ LR ++ +
Sbjct: 406 ITVPEVLRPYMGGL 419
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 96/164 (58%), Gaps = 6/164 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R+HQF KVE P D+S+ L++M N+E LG+AYRVV
Sbjct: 263 SEAGSAGRDTRGLIRLHQFHKVEMVKFAKP--DQSYDELEKMTANAENILQKLGLAYRVV 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + +AAK DLE W P +RE+ SCSNC +Q+RR +RY + K++
Sbjct: 321 ALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCEDFQARRAQIRY---RDEEGKVQL 377
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
VH LN + A R + AILE +Q E G + +P+ LR ++ + V
Sbjct: 378 VHTLNGSGLAVGRTVAAILENYQNEDGSITVPEVLRPYMGGLEV 421
>gi|417932128|ref|ZP_12575477.1| serine--tRNA ligase [Propionibacterium acnes SK182B-JCVI]
gi|340774738|gb|EGR97213.1| serine--tRNA ligase [Propionibacterium acnes SK182B-JCVI]
Length = 424
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD+YL+ TSE + A H + L +A LP RY+ S C+R+E GS+G+DTRGIFRVH F+K
Sbjct: 223 DDQYLVGTSEVALAAFHSEEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P + E+W ++++ ++F L + ++V+++ SG L +AA+K D W
Sbjct: 283 VEMFVYCLPEEAEAWH--EKLLSFEKDFITALEVPFQVLDVASGDLGLSAARKYDCYGWL 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIYATACATTRVICAILETHQTE 193
P +RE+ S SNC +Q+RRL +R+ + + T CA TR+I +LE HQ
Sbjct: 341 PTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G VR+P LR ++
Sbjct: 401 DGSVRVPVALRPYL 414
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+KVE FV P + E+W ++++ ++F L + ++V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKVEMFVYCLPEEAEAWH--EKLLSFEKDFITALEVPFQVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R+ + + +E + LN T
Sbjct: 328 LSAARKYDCYGWLPTQNRYREITSTSNCTTFQARRLSIRH----RGPDGVEPLATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I +LE HQ G VR+P LR ++
Sbjct: 384 CAMTRIIIMLLENHQQADGSVRVPVALRPYL 414
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD+YL+ TSE + A H + L +A LP RY+ S C+R+E
Sbjct: 223 DDQYLVGTSEVALAAFHSEEILDDAELPKRYVAFSPCYRREA 264
>gi|453076147|ref|ZP_21978926.1| seryl-tRNA ligase [Rhodococcus triatomae BKS 15-14]
gi|452761455|gb|EME19757.1| seryl-tRNA ligase [Rhodococcus triatomae BKS 15-14]
Length = 419
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H L ++ P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 218 EQDDLYLVGTSEVPLAGYHSGEILDLSTGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D ++ + ++ E A + + YRV+++ G L +AA+K D EA
Sbjct: 278 DKVEMFTYCKPEDADAEH--ERLLGWEREMLAAIDVPYRVIDVAGGDLGSSAARKYDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL VRY K +I AT ATTR I AILE HQ
Sbjct: 336 WVPTQQRYRELSSTSNCTTFQARRLGVRYRDENGKPQIAATLNGTLATTRWIVAILENHQ 395
Query: 192 TETG-VRIPDCLRKFV 206
G V +P L+ FV
Sbjct: 396 QADGSVTVPAALQPFV 411
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P D ++ + ++ E A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFTYCKPEDADAEH--ERLLGWEREMLAAIDVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKYDCEAWVPTQQRYRELSSTSNCTTFQARRLGVRY---RDENGKPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V +P L+ FV
Sbjct: 381 LATTRWIVAILENHQQADGSVTVPAALQPFV 411
Score = 44.3 bits (103), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H L ++ P RY G S+CFR+E
Sbjct: 218 EQDDLYLVGTSEVPLAGYHSGEILDLSTGPKRYAGWSSCFRREA 261
>gi|172039818|ref|YP_001799532.1| seryl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
gi|171851122|emb|CAQ04098.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 446
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 119/196 (60%), Gaps = 9/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H D + + P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 245 EEDDLYLVGTSEVALAGYHSDEII-DLDEPKRYAGWSSCFRREAGSYGKDTRGIIRVHQF 303
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +++ ++ E++Q ++ A + + YRV++ G L +AA+K D EA
Sbjct: 304 DKLEMFVYCRP--EQATEIHQELLQLEKDMLAAIDVPYRVIDTAGGDLGSSAARKFDTEA 361
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K ++ AT ATTR + AILE HQ
Sbjct: 362 WVPTQNTYRELTSTSNCTTFQARRLQTRYRDADGKTQVAATLNGTLATTRWLVAILENHQ 421
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 422 QADGSVVVPEALRPFV 437
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +++ + E++Q ++ A + + YRV++ G L
Sbjct: 293 DTRGIIRVHQFDKLEMFVYCRP--EQATEIHQELLQLEKDMLAAIDVPYRVIDTAGGDLG 350
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 351 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLQTRY---RDADGKTQVAATLNGT- 406
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G V +P+ LR FV
Sbjct: 407 LATTRWLVAILENHQQADGSVVVPEALRPFV 437
>gi|310287971|ref|YP_003939230.1| seryl-tRNA synthetase [Bifidobacterium bifidum S17]
gi|309251908|gb|ADO53656.1| Seryl-tRNA synthetase [Bifidobacterium bifidum S17]
Length = 453
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D++YL+ TSE + +H + L ++ P+RY G S+C+R+E G+ G+DT GI RVHQF
Sbjct: 247 EPDEQYLVGTSEVALAGMHENEILDLSNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 306
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV T D S+K ++ EE A + + YRV++ +G L +AA+K D EA
Sbjct: 307 DKVEMFVYTKQED--SYKEHQHLLSMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDTEA 364
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +YQ+RRL +R A + ATTR + AILE HQ
Sbjct: 365 WIPTQGRYRELTSTSNCTEYQARRLNIRERNEDGSTRAVSTLNGTLATTRWLVAILENHQ 424
Query: 192 TETG-VRIPDCLRKFV 206
+ G + IP +R ++
Sbjct: 425 QKDGSIEIPQAMRPYM 440
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF+KVE FV T D S+K ++ EE A + + YRV++ +G
Sbjct: 293 AGKDTSGIIRVHQFDKVEMFVYTKQED--SYKEHQHLLSMEEEMLAKVEVPYRVIDTAAG 350
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AA+K D EAW P G +REL S SNC YQ+RRL +R + + V LN
Sbjct: 351 DLGSSAARKFDTEAWIPTQGRYRELTSTSNCTEYQARRLNIR---ERNEDGSTRAVSTLN 407
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
T ATTR + AILE HQ + G + IP +R ++ V E
Sbjct: 408 GT-LATTRWLVAILENHQQKDGSIEIPQAMRPYMGGKEVIE 447
Score = 43.5 bits (101), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E D++YL+ TSE + +H + L ++ P+RY G S+C+R+E A
Sbjct: 247 EPDEQYLVGTSEVALAGMHENEILDLSNGPLRYCGWSSCYRREAGA 292
>gi|297844038|ref|XP_002889900.1| hypothetical protein ARALYDRAFT_471334 [Arabidopsis lyrata subsp.
lyrata]
gi|297335742|gb|EFH66159.1| hypothetical protein ARALYDRAFT_471334 [Arabidopsis lyrata subsp.
lyrata]
Length = 511
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 22/212 (10%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+ LI T+E P+ +H DS L E+ LP++Y+ S CFR E G+ G T+G++RVHQF K
Sbjct: 296 DQCLIGTAEIPVGGIHMDSILLESVLPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFNKA 355
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L A +K D+EAW P
Sbjct: 356 EMFVICRPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDVEAWMP 413
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKQK-----------IYATACATT 180
G G F E+ S SNC DYQSRRL +RY G K K + ATACA
Sbjct: 414 GLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAIP 473
Query: 181 RVICAILETHQTETG-VRIPDCLRKFVPAVYL 211
R++ +LE +Q E G V IP+ LR F+ + L
Sbjct: 474 RMMVCLLENYQQEDGAVVIPEPLRPFMGGIEL 505
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 97/163 (59%), Gaps = 13/163 (7%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
T+G++RVHQF K E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L
Sbjct: 343 TKGLYRVHQFNKAEMFVICRPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGA 400
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY-----GQTKKMNEK-----IE 413
A +K D+EAW PG G F E+ S SNC YQSRRL +RY QT K +
Sbjct: 401 PAYRKFDVEAWMPGLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATK 460
Query: 414 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
FVH LNATACA R++ +LE +Q E G V IP+ LR F+ +
Sbjct: 461 FVHTLNATACAIPRMMVCLLENYQQEDGAVVIPEPLRPFMGGI 503
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
D+ LI T+E P+ +H DS L E+ LP++Y+ S CFR E
Sbjct: 296 DQCLIGTAEIPVGGIHMDSILLESVLPLKYIAFSHCFRTE 335
>gi|163781886|ref|ZP_02176886.1| seryl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159883106|gb|EDP76610.1| seryl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 424
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 119/202 (58%), Gaps = 12/202 (5%)
Query: 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
E+DEL YLI T+E P+ + R L E LPI + C+R+E GSHG+D RGI R
Sbjct: 222 ERDEL---YLIPTAEVPLTNLFRGEILKEEELPIYLTAHTPCYRREAGSHGKDIRGIIRQ 278
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
HQF KVE + P D S+ L+++ ++EE LG+ YRVV + +G L +AAK D
Sbjct: 279 HQFNKVELVKIVHP--DTSYDELEKLAADAEEVLKLLGLPYRVVELCTGDLGFSAAKTYD 336
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAIL 187
LE WFP G +RE+ SCSNC D+Q+RR+ R+ + K + + A R + AIL
Sbjct: 337 LEVWFPSQGKYREISSCSNCEDFQARRMNTRFKDERGKNRFVHTLNGSGLAVGRTLAAIL 396
Query: 188 ETHQTETG-VRIPDCLRKFVPA 208
E +Q E G V +P+ LR ++ A
Sbjct: 397 ENYQREDGSVEVPEALRDYLKA 418
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI R HQF KVE + P D S+ L+++ ++EE LG+ YRVV + +G L
Sbjct: 271 DIRGIIRQHQFNKVELVKIVHP--DTSYDELEKLAADAEEVLKLLGLPYRVVELCTGDLG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK DLE WFP G +RE+ SCSNC +Q+RR+ R+ + N FVH LN +
Sbjct: 329 FSAAKTYDLEVWFPSQGKYREISSCSNCEDFQARRMNTRFKDERGKN---RFVHTLNGSG 385
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
A R + AILE +Q E G V +P+ LR ++ A
Sbjct: 386 LAVGRTLAAILENYQREDGSVEVPEALRDYLKA 418
>gi|15673694|ref|NP_267868.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
gi|281492294|ref|YP_003354274.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
gi|385831170|ref|YP_005868983.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
gi|418038039|ref|ZP_12676389.1| Serine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
I-1631]
gi|30173210|sp|Q9CEX2.1|SYS_LACLA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|12724729|gb|AAK05810.1|AE006401_11 seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
gi|281375958|gb|ADA65449.1| Seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
gi|326407178|gb|ADZ64249.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
gi|354693816|gb|EHE93546.1| Serine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
I-1631]
Length = 423
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LI T+E P+ +R L A LPI++ +S FR E GS GRDTRG+ R+HQF KVE
Sbjct: 228 LIPTAEVPLTNYYRGEILDGAELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 287
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
P D+S+ L++M N+E LG+AYRVV + +G + +AAK DLE W P
Sbjct: 288 KFAKP--DQSYDELEKMTANAENILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQN 345
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTETG- 195
+RE+ SCSNC D+Q+RR +RY + K+ + A R + AILE +Q E G
Sbjct: 346 TYREISSCSNCEDFQARRAQIRYRDEEGKVQLLHTLNGSGLAVGRTVAAILENYQNEDGS 405
Query: 196 VRIPDCLRKFVPAV 209
+ +P+ LR ++ +
Sbjct: 406 ITVPEVLRPYMGGL 419
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 6/164 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R+HQF KVE P D+S+ L++M N+E LG+AYRVV
Sbjct: 263 SEAGSAGRDTRGLIRLHQFHKVEMVKFAKP--DQSYDELEKMTANAENILQKLGLAYRVV 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + +AAK DLE W P +RE+ SCSNC +Q+RR +RY + K++
Sbjct: 321 ALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCEDFQARRAQIRY---RDEEGKVQL 377
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
+H LN + A R + AILE +Q E G + +P+ LR ++ + V
Sbjct: 378 LHTLNGSGLAVGRTVAAILENYQNEDGSITVPEVLRPYMGGLEV 421
>gi|406957548|gb|EKD85458.1| hypothetical protein ACD_38C00019G0003 [uncultured bacterium]
Length = 410
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 120/194 (61%), Gaps = 7/194 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ +L+ T+E P+ A+H D LP +Y+G+S CFR E+GS+G+DT+G++RVH+F K
Sbjct: 208 DEDFLVGTAEIPLMAMHSDETFDTGDLPKKYVGMSACFRTEIGSYGKDTKGLYRVHEFYK 267
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQ +L + +S +E+ +NSEE LG+ Y+VV + S + AA D+E W
Sbjct: 268 VEQVILCESDEQQSLGFFEELQENSEELLRKLGLPYQVVVLSSEDMGKKAALTYDIETWM 327
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKIYATACATTRVICAILETHQT 192
G G+F E S S LD+Q+RRL ++Y G K + TA A+ R++ AILE Q
Sbjct: 328 SGRGSFGETHSNSIVLDFQTRRLKIKYRDKDGNIKYCHALNNTAIASPRILIAILENFQA 387
Query: 193 ETG-VRIPDCLRKF 205
E G V+IP+ L+K+
Sbjct: 388 EDGTVKIPEALQKY 401
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 92/150 (61%), Gaps = 4/150 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G++RVH+F KVEQ +L + +S +E+ +NSEE LG+ Y+VV + S +
Sbjct: 255 DTKGLYRVHEFYKVEQVILCESDEQQSLGFFEELQENSEELLRKLGLPYQVVVLSSEDMG 314
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA D+E W G G+F E S S L +Q+RRL ++Y + + I++ H LN TA
Sbjct: 315 KKAALTYDIETWMSGRGSFGETHSNSIVLDFQTRRLKIKY---RDKDGNIKYCHALNNTA 371
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKF 451
A+ R++ AILE Q E G V+IP+ L+K+
Sbjct: 372 IASPRILIAILENFQAEDGTVKIPEALQKY 401
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+ +L+ T+E P+ A+H D LP +Y+G+S CFR E +
Sbjct: 208 DEDFLVGTAEIPLMAMHSDETFDTGDLPKKYVGMSACFRTEIGS 251
>gi|453049258|gb|EME96866.1| seryl-tRNA ligase [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 425
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ A H D + + LP+RY G S CFR+E G++G+DTRGIFRVHQF
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEIIDASQLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F +P E+ +++ +++ L + ++V++ +G L +A++K D EA
Sbjct: 281 DKVEMFSYVAPE--EAEAEHARLLEWEKQWLTSLELPFQVIDTATGDLGASASRKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P G +REL S SNC ++Q+RRL VR K + T CA R I A+LE HQ
Sbjct: 339 WIPTQGKYRELTSTSNCDEFQARRLSVRMRDGKNVRPLATLNGTLCAVPRTIVALLENHQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 399 QADGTVRVPEVLRPYL 414
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQF+KVE F +P E+ +++ +++ L + ++V++ +G L
Sbjct: 270 DTRGIFRVHQFDKVEMFSYVAPE--EAEAEHARLLEWEKQWLTSLELPFQVIDTATGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +REL S SNC +Q+RRL VR K + + LN T
Sbjct: 328 ASASRKFDCEAWIPTQGKYRELTSTSNCDEFQARRLSVRMRDGKNVRP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA R I A+LE HQ G VR+P+ LR ++
Sbjct: 384 CAVPRTIVALLENHQQADGTVRVPEVLRPYL 414
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ A H D + + LP+RY G S CFR+E
Sbjct: 221 EKDDFYLVGTSEVPLAAYHMDEIIDASQLPLRYAGFSPCFRREA 264
>gi|392943895|ref|ZP_10309537.1| seryl-tRNA synthetase [Frankia sp. QA3]
gi|392287189|gb|EIV93213.1| seryl-tRNA synthetase [Frankia sp. QA3]
Length = 420
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 113/195 (57%), Gaps = 7/195 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL T+E + +H L A LPIRY G+S CFR+E+GS RD RG+ RVHQFEK
Sbjct: 220 DDLYLAGTAEVALVGLHAGEILDAARLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFVL + + ES E++ +E +DLG+ Y VV +G + + D+ WF
Sbjct: 280 VEQFVLCAADEAESASWHAELLATAERILSDLGLCYEVVECATGDMGVGKFRMNDINTWF 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQT------KQKIYATACATTRVICAILETHQT 192
P G FRE SCS D+Q+RR +RY T + TA AT R++ A+LE QT
Sbjct: 340 PSLGRFRETHSCSTLHDWQARRANLRYRDTDGTVRFAHTLNNTAVATPRLLAALLENFQT 399
Query: 193 ETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 400 ADGAVRVPEVLRPYL 414
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D RG+ RVHQFEKVEQFVL + + ES E++ +E +DLG+ Y VV +G
Sbjct: 264 ASRDVRGLLRVHQFEKVEQFVLCAADEAESASWHAELLATAERILSDLGLCYEVVECATG 323
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+ + D+ WFP G FRE SCS +Q+RR +RY T + + F H LN
Sbjct: 324 DMGVGKFRMNDINTWFPSLGRFRETHSCSTLHDWQARRANLRYRDT---DGTVRFAHTLN 380
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
TA AT R++ A+LE QT G VR+P+ LR ++
Sbjct: 381 NTAVATPRLLAALLENFQTADGAVRVPEVLRPYL 414
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQRE- 593
DD YL T+E + +H L A LPIRY G+S CFR+E + A R+
Sbjct: 220 DDLYLAGTAEVALVGLHAGEILDAARLPIRYAGISPCFRRE-----------IGSASRDV 268
Query: 594 -GLLSEATSEEVDQADPFYAHCRLHADKLEDFSKFSKILVCCVCLGERSDDVNEIVECDS 652
GLL E+V+Q + C AD+ E S +++L + E+VEC +
Sbjct: 269 RGLLRVHQFEKVEQ----FVLC--AADEAESASWHAELLATAERILSDLGLCYEVVECAT 322
Query: 653 CGVTVHEVKIQ 663
+ V + ++
Sbjct: 323 GDMGVGKFRMN 333
>gi|28493693|ref|NP_787854.1| seryl-tRNA synthetase [Tropheryma whipplei str. Twist]
gi|46577233|sp|Q83FJ7.1|SYS_TROWT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|28476735|gb|AAO44823.1| seryl-tRNA synthetase [Tropheryma whipplei str. Twist]
Length = 417
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 112/191 (58%), Gaps = 8/191 (4%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YL TSE I H D L +S PIRY G S+C+R+E GSHGRDTRGI RVHQF K+E
Sbjct: 222 YLTGTSEVAIAGYHSDEILDISSGPIRYAGWSSCYRREAGSHGRDTRGIMRVHQFSKLEM 281
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F P +S + L+ ++ E+ L I YRV +I + L +A++K DLEAW P
Sbjct: 282 FSYVHPQ--QSTRELEHIVSMQEKMLNLLEIPYRVSDIAAEELGTSASRKYDLEAWIPSQ 339
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTETG- 195
+RE+ S S+C +Q+RRL VRY + A ATTR + AILE HQT G
Sbjct: 340 NTWREVTSASDCTTFQARRLNVRYRDESGRTGYVATLNGTLATTRFLVAILENHQTSNGS 399
Query: 196 VRIPDCLRKFV 206
+R+P+ LR +
Sbjct: 400 IRVPEALRPLL 410
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF K+E F P +S + L+ ++ E+ L I YRV +I + L
Sbjct: 266 DTRGIMRVHQFSKLEMFSYVHPQ--QSTRELEHIVSMQEKMLNLLEIPYRVSDIAAEELG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K DLEAW P +RE+ S S+C +Q+RRL VRY + + + +V LN T
Sbjct: 324 TSASRKYDLEAWIPSQNTWREVTSASDCTTFQARRLNVRY---RDESGRTGYVATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQT G +R+P+ LR +
Sbjct: 380 LATTRFLVAILENHQTSNGSIRVPEALRPLL 410
>gi|153951229|ref|YP_001398568.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
gi|166228635|sp|A7H4Y8.1|SYS_CAMJD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|152938675|gb|ABS43416.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
Length = 411
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE PI ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPITNLYSGEILTSETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDALKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDALKKY 410
>gi|28572881|ref|NP_789661.1| seryl-tRNA synthetase [Tropheryma whipplei TW08/27]
gi|46577235|sp|Q83HA1.1|SYS_TROW8 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|28411014|emb|CAD67399.1| seryl-tRNA synthetase [Tropheryma whipplei TW08/27]
Length = 417
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 112/191 (58%), Gaps = 8/191 (4%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YL TSE I H D L +S PIRY G S+C+R+E GSHGRDTRGI RVHQF K+E
Sbjct: 222 YLTGTSEVAIAGYHSDEILDISSGPIRYAGWSSCYRREAGSHGRDTRGIMRVHQFSKLEM 281
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F P +S + L+ ++ E+ L I YRV +I + L +A++K DLEAW P
Sbjct: 282 FSYVHPQ--QSTRELEHIVSMQEKMLNLLEIPYRVSDIAAEELGTSASRKYDLEAWIPSQ 339
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTETG- 195
+RE+ S S+C +Q+RRL VRY + A ATTR + AILE HQT G
Sbjct: 340 NTWREVTSASDCTTFQARRLNVRYRDESGRTGYVATLNGTLATTRFLVAILENHQTSNGS 399
Query: 196 VRIPDCLRKFV 206
+R+P+ LR +
Sbjct: 400 IRVPEALRPLL 410
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF K+E F P +S + L+ ++ E+ L I YRV +I + L
Sbjct: 266 DTRGIMRVHQFSKLEMFSYVHPQ--QSTRELEHIVSMQEKMLNLLEIPYRVSDIAAEELG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K DLEAW P +RE+ S S+C +Q+RRL VRY + + + +V LN T
Sbjct: 324 TSASRKYDLEAWIPSQNTWREVTSASDCTTFQARRLNVRY---RDESGRTGYVATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQT G +R+P+ LR +
Sbjct: 380 LATTRFLVAILENHQTSNGSIRVPEALRPLL 410
>gi|51598487|ref|YP_072675.1| seryl-tRNA synthetase [Borrelia garinii PBi]
gi|67461723|sp|Q662D8.1|SYS_BORGA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|51573058|gb|AAU07083.1| seryl-tRNA synthetase [Borrelia garinii PBi]
Length = 425
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 131/228 (57%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E G
Sbjct: 205 IGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G++ E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
TA ATTRVI +ILE Q E GVRIP L K+ G IPF
Sbjct: 382 NGTAIATTRVIISILENFQDEKGGVRIPKSLVKYTG------FGYIPF 423
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 93/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G++ E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFGYI 421
>gi|403235089|ref|ZP_10913675.1| seryl-tRNA ligase [Bacillus sp. 10403023]
Length = 428
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 118/203 (58%), Gaps = 10/203 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E D +LI T+E P+ +HRD L LPI Y+G S+CFR E GS GRDTRG+ R H
Sbjct: 220 KIEGKDYFLIPTAEVPLINIHRDDILTNDQLPINYVGHSSCFRSEAGSAGRDTRGLIRQH 279
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVE +T P +ES+ L+++ +E+ LG+ Y+V+N+ G L AAKK D+
Sbjct: 280 QFNKVELVKITKP--EESYNELEKLTNQAEKVLQLLGLPYQVLNMCMGDLGFTAAKKYDV 337
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAIL 187
E W P +RE+ SCSN D+Q+RR +R+ + + + A R + AIL
Sbjct: 338 EVWMPSYNTYREISSCSNLEDFQARRANIRFRREAGGKLEFPHTLNGSGLAVGRTVAAIL 397
Query: 188 ETHQTETG-VRIPDCLRKFVPAV 209
E +Q E G V IP+ LR ++ +
Sbjct: 398 ENYQQEDGSVIIPEVLRPYMKGM 420
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 95/162 (58%), Gaps = 5/162 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE +T P +ES+ L+++ +E+ LG+ Y+V+
Sbjct: 263 SEAGSAGRDTRGLIRQHQFNKVELVKITKP--EESYNELEKLTNQAEKVLQLLGLPYQVL 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
N+ G L AAKK D+E W P +RE+ SCSN +Q+RR +R+ ++ K+EF
Sbjct: 321 NMCMGDLGFTAAKKYDVEVWMPSYNTYREISSCSNLEDFQARRANIRF--RREAGGKLEF 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
H LN + A R + AILE +Q E G V IP+ LR ++ +
Sbjct: 379 PHTLNGSGLAVGRTVAAILENYQQEDGSVIIPEVLRPYMKGM 420
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E D +LI T+E P+ +HRD L LPI Y+G S+CFR E +
Sbjct: 220 KIEGKDYFLIPTAEVPLINIHRDDILTNDQLPINYVGHSSCFRSEAGSA 268
>gi|357465107|ref|XP_003602835.1| Seryl-tRNA synthetase [Medicago truncatula]
gi|355491883|gb|AES73086.1| Seryl-tRNA synthetase [Medicago truncatula]
Length = 379
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 22/207 (10%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+ LI T+E P+ +H DS L E+ LP++Y+ S CFR E G+ G TRG++RVHQF K+
Sbjct: 165 DQCLIGTAEIPVGGLHMDSILAESMLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKI 224
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E F+ P + + + +E+I+ E+ ++ LG+ ++ +++ S L A +K D+EAW P
Sbjct: 225 EMFIFCRPEESDYYH--EELIKIEEDMFSSLGLHFKTLDMASEDLGAPAYRKFDVEAWMP 282
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKQK-----------IYATACATT 180
G F E+ S SNC DYQSRRL +RY G K K + ATACA
Sbjct: 283 GLERFGEISSASNCTDYQSRRLGIRYRPSEVLVPGPKKSKGNLAPPQFVHTLNATACAVP 342
Query: 181 RVICAILETHQTETG-VRIPDCLRKFV 206
R+I +LE +Q E G V IP+ LR F+
Sbjct: 343 RMIICLLENYQQEDGSVLIPEPLRPFM 369
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 99/169 (58%), Gaps = 13/169 (7%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
+E A TRG++RVHQF K+E F+ P + + + +E+I+ E+ ++ LG+ ++ +
Sbjct: 203 TEAGAAGTATRGLYRVHQFSKIEMFIFCRPEESDYYH--EELIKIEEDMFSSLGLHFKTL 260
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY----------GQ 404
++ S L A +K D+EAW PG F E+ S SNC YQSRRL +RY +
Sbjct: 261 DMASEDLGAPAYRKFDVEAWMPGLERFGEISSASNCTDYQSRRLGIRYRPSEVLVPGPKK 320
Query: 405 TKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+K +FVH LNATACA R+I +LE +Q E G V IP+ LR F+
Sbjct: 321 SKGNLAPPQFVHTLNATACAVPRMIICLLENYQQEDGSVLIPEPLRPFM 369
Score = 46.6 bits (109), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRT 583
D+ LI T+E P+ +H DS L E+ LP++Y+ S CFR E A T
Sbjct: 165 DQCLIGTAEIPVGGLHMDSILAESMLPLKYVAFSHCFRTEAGAAGTAT 212
>gi|222111942|ref|YP_002554206.1| seryl-tRNA synthetase [Acidovorax ebreus TPSY]
gi|254783024|sp|B9MEG7.1|SYS_ACIET RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|221731386|gb|ACM34206.1| seryl-tRNA synthetase [Acidovorax ebreus TPSY]
Length = 442
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 12/210 (5%)
Query: 4 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSH 63
KG + + P+ +L YLI TSE P+ RD L EA LP++ + CFR E GS+
Sbjct: 230 KGGQDAEPVPDNAQL---YLIPTSEVPLTNFVRDEVLAEAQLPLKLTAHTPCFRSEAGSY 286
Query: 64 GRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGA 123
GRDTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRV+++ +G
Sbjct: 287 GRDTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAEAVLQKLGLPYRVMSLCTGD 344
Query: 124 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATAC 177
+ AAK DLE W P +RE+ S SNC +Q+RRL R+ + K + +
Sbjct: 345 MGFGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGL 404
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFV 206
A R + A+LE +Q E G V IP+ LR ++
Sbjct: 405 AVGRTLVAVLENYQNEDGSVTIPEVLRPYM 434
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRV+++ +G +
Sbjct: 289 DTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAEAVLQKLGLPYRVMSLCTGDMG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK DLE W P +RE+ S SNC A+Q+RRL R+ K K E VH LN +
Sbjct: 347 FGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARF---KNAQGKNELVHTLNGSG 403
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + A+LE +Q E G V IP+ LR ++
Sbjct: 404 LAVGRTLVAVLENYQNEDGSVTIPEVLRPYM 434
>gi|206974285|ref|ZP_03235202.1| seryl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217957908|ref|YP_002336452.1| seryl-tRNA synthetase [Bacillus cereus AH187]
gi|222094107|ref|YP_002528164.1| seryl-tRNA synthetase [Bacillus cereus Q1]
gi|229142782|ref|ZP_04271236.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|375282440|ref|YP_005102877.1| seryl-tRNA synthetase [Bacillus cereus NC7401]
gi|423356802|ref|ZP_17334404.1| serine-tRNA ligase [Bacillus cereus IS075]
gi|423375698|ref|ZP_17353034.1| serine-tRNA ligase [Bacillus cereus AND1407]
gi|423572369|ref|ZP_17548575.1| serine-tRNA ligase [Bacillus cereus MSX-A12]
gi|206747525|gb|EDZ58915.1| seryl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217064889|gb|ACJ79139.1| seryl-tRNA synthetase [Bacillus cereus AH187]
gi|221238162|gb|ACM10872.1| SerS [Bacillus cereus Q1]
gi|228640676|gb|EEK97053.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|358350965|dbj|BAL16137.1| seryl-tRNA synthetase [Bacillus cereus NC7401]
gi|401077141|gb|EJP85485.1| serine-tRNA ligase [Bacillus cereus IS075]
gi|401091190|gb|EJP99333.1| serine-tRNA ligase [Bacillus cereus AND1407]
gi|401197525|gb|EJR04455.1| serine-tRNA ligase [Bacillus cereus MSX-A12]
Length = 427
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 8/206 (3%)
Query: 8 VGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDT 67
+G K +KYLI TSE PI + + + ++ PI+ G+S CFR EVG+ GRD
Sbjct: 214 IGQDQTYKLANSNKYLIGTSEVPIVSYYSNEFV-NIEKPIKLAGISNCFRSEVGAAGRDV 272
Query: 68 RGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHA 127
+G++RVHQF KVEQ +L + ++S +L+E+ QN+EE L + YRVV++ +G +
Sbjct: 273 KGLYRVHQFSKVEQVILCENNVEKSNLILEEITQNAEEILQLLELPYRVVSVCTGDIGQG 332
Query: 128 AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKIYATACATTR 181
KK D+E W P ++ E S SN LD+QSRR +RY G+ K + TA AT R
Sbjct: 333 VFKKYDIETWMPSRNSYGETQSASNLLDFQSRRSKIRYKDNNGEIKYCHTLNNTAIATPR 392
Query: 182 VICAILETHQTETG-VRIPDCLRKFV 206
++ +LE HQ E G + IP LRK++
Sbjct: 393 ILIPLLEVHQQEDGSIYIPRALRKYL 418
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 96/159 (60%), Gaps = 4/159 (2%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A D +G++RVHQF KVEQ +L + ++S L+E+ QN+EE L + YRVV
Sbjct: 263 SEVGAAGRDVKGLYRVHQFSKVEQVILCENNVEKSNLILEEITQNAEEILQLLELPYRVV 322
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
++ +G + KK D+E W P ++ E S SN L +QSRR +RY K N +I++
Sbjct: 323 SVCTGDIGQGVFKKYDIETWMPSRNSYGETQSASNLLDFQSRRSKIRY---KDNNGEIKY 379
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
H LN TA AT R++ +LE HQ E G + IP LRK++
Sbjct: 380 CHTLNNTAIATPRILIPLLEVHQQEDGSIYIPRALRKYL 418
>gi|158522755|ref|YP_001530625.1| seryl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
gi|238686901|sp|A8ZXS1.1|SYS_DESOH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|158511581|gb|ABW68548.1| seryl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
Length = 425
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 117/193 (60%), Gaps = 10/193 (5%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YLI T+E P+ + D L EA LPI+Y + CFR E GS+G+DT+G+ R HQF KVE
Sbjct: 227 YLIPTAEVPVTNIFADEILNEADLPIKYTAYTPCFRSEAGSYGKDTKGLIRQHQFNKVE- 285
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
++ H + S+ L++++ ++E LG+AYRV+ + SG + +AAK D+E WFP
Sbjct: 286 -LVKFAHPEHSYDELEKLLADAETILQRLGLAYRVITLCSGDMGFSAAKTYDIEVWFPAQ 344
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQTET 194
+RE+ SCSN D+Q+RR +R+ + QK + + A R + AILE QT+
Sbjct: 345 NRYREISSCSNFEDFQARRANIRFKRPGQKGTGFVHTLNGSGLAVGRTLAAILENFQTKE 404
Query: 195 G-VRIPDCLRKFV 206
G V IPD LR ++
Sbjct: 405 GAVEIPDTLRPYM 417
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 93/152 (61%), Gaps = 7/152 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G+ R HQF KVE ++ H + S+ L++++ ++E LG+AYRV+ + SG +
Sbjct: 271 DTKGLIRQHQFNKVE--LVKFAHPEHSYDELEKLLADAETILQRLGLAYRVITLCSGDMG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK-IEFVHMLNAT 421
+AAK D+E WFP +RE+ SCSN +Q+RR +R+ K+ +K FVH LN +
Sbjct: 329 FSAAKTYDIEVWFPAQNRYREISSCSNFEDFQARRANIRF---KRPGQKGTGFVHTLNGS 385
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + AILE QT+ G V IPD LR ++
Sbjct: 386 GLAVGRTLAAILENFQTKEGAVEIPDTLRPYM 417
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
YLI T+E P+ + D L EA LPI+Y + CFR E
Sbjct: 227 YLIPTAEVPVTNIFADEILNEADLPIKYTAYTPCFRSEA 265
>gi|419621953|ref|ZP_14155198.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23216]
gi|380600845|gb|EIB21171.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23216]
Length = 411
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDALKKY 410
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDALKKY 410
>gi|340793171|ref|YP_004758634.1| Seryl-tRNA synthetase [Corynebacterium variabile DSM 44702]
gi|340533081|gb|AEK35561.1| Seryl-tRNA synthetase [Corynebacterium variabile DSM 44702]
Length = 424
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 115/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +L+ TSE + H D + + P++Y G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 223 DDLFLVGTSEVALAGYHSDEIIDLSEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P D E ++ +++ ++ A + + YRV+++ G L +A++K D EAW
Sbjct: 283 VEMFVYAKPEDAE--EIHQQLLAMEKDMLAAVEVPYRVIDVAGGDLGSSASRKFDTEAWV 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 341 PTQNTYRELTSTSNCTTFQARRLKTRYRDENGKAQTAATLNGTLATTRWLVAILENNQQA 400
Query: 194 TG-VRIPDCLRKFV 206
G V +P+ LR F+
Sbjct: 401 DGSVVVPEALRPFI 414
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D E +++ ++ A + + YRV+++ G L
Sbjct: 270 DTRGILRVHQFDKVEMFVYAKPEDAEEIHQ--QLLAMEKDMLAAVEVPYRVIDVAGGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 328 SSASRKFDTEAWVPTQNTYRELTSTSNCTTFQARRLKTRY---RDENGKAQTAATLNGT- 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR F+
Sbjct: 384 LATTRWLVAILENNQQADGSVVVPEALRPFI 414
>gi|300780262|ref|ZP_07090118.1| serine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
gi|300534372|gb|EFK55431.1| serine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
Length = 455
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + HRD + + P+ Y G S+CFR+E GS+G+DT+GI RVHQF
Sbjct: 255 ERDDLYLVGTSEVALAGYHRDEIIDLSDGPLLYAGWSSCFRREAGSYGKDTKGILRVHQF 314
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D E +M +++ E A + + YR++++ +G L +AA+K D EA
Sbjct: 315 DKLEMFVYCKPEDAE--EMHQKLLGLEREMLAAVEVPYRIIDVAAGDLGSSAARKFDTEA 372
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q RRL RY K A ATTR + AILE +Q
Sbjct: 373 WVPSQDTYRELTSTSNCTTFQGRRLNTRYRDESGKTQTAATLNGTLATTRWLVAILENNQ 432
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR +V
Sbjct: 433 QADGSVVVPEALRPWV 448
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GI RVHQF+K+E FV P D E +++ E A + + YR++++ +G L
Sbjct: 304 DTKGILRVHQFDKLEMFVYCKPEDAEEMH--QKLLGLEREMLAAVEVPYRIIDVAAGDLG 361
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q RRL RY + + K + LN T
Sbjct: 362 SSAARKFDTEAWVPSQDTYRELTSTSNCTTFQGRRLNTRY---RDESGKTQTAATLNGT- 417
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR +V
Sbjct: 418 LATTRWLVAILENNQQADGSVVVPEALRPWV 448
Score = 43.5 bits (101), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + HRD + + P+ Y G S+CFR+E
Sbjct: 255 ERDDLYLVGTSEVALAGYHRDEIIDLSDGPLLYAGWSSCFRREA 298
>gi|121595739|ref|YP_987635.1| seryl-tRNA synthetase [Acidovorax sp. JS42]
gi|166200592|sp|A1WBD4.1|SYS_ACISJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|120607819|gb|ABM43559.1| seryl-tRNA synthetase [Acidovorax sp. JS42]
Length = 442
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 12/210 (5%)
Query: 4 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSH 63
KG + + P+ +L YLI TSE P+ RD L EA LP++ + CFR E GS+
Sbjct: 230 KGGQDAEPVPDNAQL---YLIPTSEVPLTNFVRDEVLAEAQLPLKLTAHTPCFRSEAGSY 286
Query: 64 GRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGA 123
GRDTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRV+++ +G
Sbjct: 287 GRDTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAEAVLQKLGLPYRVMSLCTGD 344
Query: 124 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATAC 177
+ AAK DLE W P +RE+ S SNC +Q+RRL R+ + K + +
Sbjct: 345 MGFGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGL 404
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFV 206
A R + A+LE +Q E G V IP+ LR ++
Sbjct: 405 AVGRTLVAVLENYQNEDGSVTIPEVLRPYM 434
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRV+++ +G +
Sbjct: 289 DTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAEAVLQKLGLPYRVMSLCTGDMG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK DLE W P +RE+ S SNC A+Q+RRL R+ K K E VH LN +
Sbjct: 347 FGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARF---KNAQGKNELVHTLNGSG 403
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + A+LE +Q E G V IP+ LR ++
Sbjct: 404 LAVGRTLVAVLENYQNEDGSVTIPEVLRPYM 434
>gi|443670916|ref|ZP_21136039.1| Seryl-tRNA synthetase [Rhodococcus sp. AW25M09]
gi|443416516|emb|CCQ14376.1| Seryl-tRNA synthetase [Rhodococcus sp. AW25M09]
Length = 417
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H + A P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 218 EADDLYLVGTSEVALAGYHSGEIIDLADGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E F P D + ++++ +E A + + YRV++ G L +AA+K D EA
Sbjct: 278 DKIEMFSYIKPEDAAAEHQ--KLLEFEKEMLAAVEVPYRVIDTAGGDLGSSAARKFDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P A+REL S SNC +Q+RRL VRY K A ATTR I AILE HQ
Sbjct: 336 WVPTQKAYRELTSTSNCTTFQARRLGVRYRDENGKPQTAATLNGTLATTRWIVAILENHQ 395
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 396 QADGTVRVPAALVPFV 411
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E F P D + ++++ +E A + + YRV++ G L
Sbjct: 267 DTRGIIRVHQFDKIEMFSYIKPED--AAAEHQKLLEFEKEMLAAVEVPYRVIDTAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQKAYRELTSTSNCTTFQARRLGVRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G VR+P L FV
Sbjct: 381 LATTRWIVAILENHQQADGTVRVPAALVPFV 411
>gi|408670853|ref|YP_006870924.1| seryl-tRNA synthetase [Borrelia garinii NMJW1]
gi|407240675|gb|AFT83558.1| seryl-tRNA synthetase [Borrelia garinii NMJW1]
Length = 425
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 129/220 (58%), Gaps = 13/220 (5%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E G
Sbjct: 205 IGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G++ E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYL 211
TA ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 382 NGTAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 93/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G++ E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
>gi|304315564|ref|YP_003850709.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777066|gb|ADL67625.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 423
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++R++ + LPI S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRETIIDAEELPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E +T P + S++ L++M+ ++E+ LGI YRVV+I +G L AAKK DLE W P
Sbjct: 284 ELVKITEP--ERSYEELEKMVNDAEDVLKTLGIPYRVVSICTGDLGFTAAKKYDLEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEISSCSNCEDFQARRANIKYRPKGGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 402 EDGSVVIPEALRPYM 416
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 94/154 (61%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE +T P + S++ L++M+ ++E+ LGI YRVV+I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKITEP--ERSYEELEKMVNDAEDVLKTLGIPYRVVSICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKGGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V IP+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVIPEALRPYM 416
>gi|419694382|ref|ZP_14222347.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9872]
gi|380670734|gb|EIB85979.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 411
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDALKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDALKKY 410
>gi|419640102|ref|ZP_14172040.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23357]
gi|419652294|ref|ZP_14183373.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-894]
gi|380619810|gb|EIB38846.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23357]
gi|380629573|gb|EIB47829.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-894]
Length = 411
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDALKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDALKKY 410
>gi|386853239|ref|YP_006271252.1| seryl-tRNA synthetase [Actinoplanes sp. SE50/110]
gi|359840743|gb|AEV89184.1| seryl-tRNA synthetase [Actinoplanes sp. SE50/110]
Length = 419
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + A H + L ++ P R+ G STC+R+E GSHG+D RGI RVHQF
Sbjct: 216 EADDLYLVGTSEVALAAYHSNEILDLSAGPSRFAGWSTCYRREAGSHGKDVRGILRVHQF 275
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D + + ++ EE A + I YRV+++ +G L +A +K D EA
Sbjct: 276 DKVEMFSFCRPED--AAEEHQRLLAMEEEMLAKVEIPYRVIDVAAGDLGSSAVRKFDCEA 333
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +RE+ S SNC +Q+RRL +RY K A ATTR + ILE HQ
Sbjct: 334 WVPSQGRYREVTSTSNCTTFQARRLNIRYRDENGKPQTAATLNGTLATTRWLIPILENHQ 393
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L+ F+
Sbjct: 394 QPDGSVRVPKALQPFL 409
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI RVHQF+KVE F P D + + ++ EE A + I YRV+++ +G L
Sbjct: 265 DVRGILRVHQFDKVEMFSFCRPED--AAEEHQRLLAMEEEMLAKVEIPYRVIDVAAGDLG 322
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P G +RE+ S SNC +Q+RRL +RY + N K + LN T
Sbjct: 323 SSAVRKFDCEAWVPSQGRYREVTSTSNCTTFQARRLNIRY---RDENGKPQTAATLNGT- 378
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + ILE HQ G VR+P L+ F+
Sbjct: 379 LATTRWLIPILENHQQPDGSVRVPKALQPFL 409
Score = 41.6 bits (96), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + A H + L ++ P R+ G STC+R+E
Sbjct: 216 EADDLYLVGTSEVALAAYHSNEILDLSAGPSRFAGWSTCYRREA 259
>gi|296137899|ref|YP_003645142.1| seryl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
gi|296026033|gb|ADG76803.1| seryl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
Length = 417
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H + PIRY S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 EADDLYLVGTSEVPLAGYHMGEIIDLNDGPIRYAAQSSCFRREAGSYGKDTRGIIRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D E+ ++ +E A + + YRV+++ +G L +AA+K D EA
Sbjct: 277 DKIEMFVYCKPEDAEAEHQ--RLLDFEKEMLAAVEVPYRVIDVAAGDLGSSAARKFDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL VRY + +I AT ATTR + AI E HQ
Sbjct: 335 WVPSQERYRELTSTSNCTTFQARRLGVRYRDEDGRPQIAATLNGTLATTRWLVAIWENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L+ F+
Sbjct: 395 QPDGSVRVPAALQPFL 410
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D E+ ++ +E A + + YRV+++ +G L
Sbjct: 266 DTRGIIRVHQFDKIEMFVYCKPEDAEAEHQ--RLLDFEKEMLAAVEVPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + + + + LN T
Sbjct: 324 SSAARKFDCEAWVPSQERYRELTSTSNCTTFQARRLGVRY---RDEDGRPQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AI E HQ G VR+P L+ F+
Sbjct: 380 LATTRWLVAIWENHQQPDGSVRVPAALQPFL 410
Score = 43.5 bits (101), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 516 EVIGKGEKVGDSAPE--KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFR 573
E++G +G A E + E DD YL+ TSE P+ H + PIRY S+CFR
Sbjct: 198 EIMGGTGFLGAHADEIYRLEADDLYLVGTSEVPLAGYHMGEIIDLNDGPIRYAAQSSCFR 257
Query: 574 QEC 576
+E
Sbjct: 258 REA 260
>gi|384246532|gb|EIE20022.1| putative seryl-tRNA synthetase [Coccomyxa subellipsoidea C-169]
Length = 464
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 120/205 (58%), Gaps = 23/205 (11%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
L T+E P+ AV+ D +PE LPIR CFR E GS G +RG++RVHQF KVE F
Sbjct: 249 LTGTAEVPLAAVYMDQIIPEEQLPIRLAAFGHCFRTEAGSAGSASRGLYRVHQFSKVEMF 308
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
VL++P E+ ML E+ EE + +LG+ ++++++ +G L A +K+D+EAW PG
Sbjct: 309 VLSTPEQSEA--MLQELCDIEEEIFTELGLHFQMLDMPTGDLGAPAYRKIDIEAWMPGLQ 366
Query: 143 AFRELVSCSNCLDYQSRRLLVRY----------GQTKQ----------KIYATACATTRV 182
+ E+ S SNC DYQ+RRL +RY G +K+ + ATACA R+
Sbjct: 367 RYGEVSSASNCTDYQARRLNIRYRPSVADEERKGGSKKTRKLPTEFLHTLNATACAVPRL 426
Query: 183 ICAILETHQTETG-VRIPDCLRKFV 206
I AILE Q E G V IP LR ++
Sbjct: 427 IVAILENCQAEDGSVVIPQVLRPYM 451
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 97/161 (60%), Gaps = 14/161 (8%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
+RG++RVHQF KVE FVL++P E+ L E+ EE + +LG+ ++++++ +G L
Sbjct: 293 SRGLYRVHQFSKVEMFVLSTPEQSEAM--LQELCDIEEEIFTELGLHFQMLDMPTGDLGA 350
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY-----------GQTKKMNEKI 412
A +K+D+EAW PG + E+ S SNC YQ+RRL +RY G K
Sbjct: 351 PAYRKIDIEAWMPGLQRYGEVSSASNCTDYQARRLNIRYRPSVADEERKGGSKKTRKLPT 410
Query: 413 EFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
EF+H LNATACA R+I AILE Q E G V IP LR ++
Sbjct: 411 EFLHTLNATACAVPRLIVAILENCQAEDGSVVIPQVLRPYM 451
>gi|419642785|ref|ZP_14174563.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|419681186|ref|ZP_14210031.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 140-16]
gi|419683466|ref|ZP_14212162.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1213]
gi|380623859|gb|EIB42540.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|380658573|gb|EIB74579.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1213]
gi|380658844|gb|EIB74840.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 140-16]
Length = 411
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDALKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDALKKY 410
>gi|376255294|ref|YP_005143753.1| seryl-tRNA synthetase [Corynebacterium diphtheriae PW8]
gi|372118378|gb|AEX70848.1| seryl-tRNA synthetase [Corynebacterium diphtheriae PW8]
Length = 419
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +E+ ++ + A + + YR++++ G L +AA+K D EA
Sbjct: 277 DKLEMFVYCKP--EEAVAQHQALLNMERDMLAAVEVPYRIIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K + A ATTR + AILE +Q
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLRTRYRDESGKAHTAATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVIVPEALRPFV 410
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +E+ ++ + A + + YR++++ G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCKP--EEAVAQHQALLNMERDMLAAVEVPYRIIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K LN T
Sbjct: 324 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLRTRY---RDESGKAHTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVIVPEALRPFV 410
Score = 44.3 bits (103), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREA 260
>gi|419697601|ref|ZP_14225333.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23211]
gi|380678011|gb|EIB92870.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23211]
Length = 411
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|433653770|ref|YP_007297478.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433291959|gb|AGB17781.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 423
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++R++ + LPI S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRETIIDAEELPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E +T P + S++ L++M+ ++E+ LGI YRVV+I +G L AAKK DLE W P
Sbjct: 284 ELVKITEP--ERSYEELEKMVNDAEDVLKTLGIPYRVVSICTGDLGFTAAKKYDLEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEISSCSNCEDFQARRANIKYRPKGGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 402 EDGSVVIPEALRPYM 416
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 94/154 (61%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE +T P + S++ L++M+ ++E+ LGI YRVV+I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKITEP--ERSYEELEKMVNDAEDVLKTLGIPYRVVSICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKGGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V IP+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVIPEALRPYM 416
>gi|419687756|ref|ZP_14216091.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1854]
gi|380666587|gb|EIB82118.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1854]
Length = 411
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|343127544|ref|YP_004777475.1| seryl-tRNA synthetase [Borrelia bissettii DN127]
gi|342222232|gb|AEL18410.1| seryl-tRNA synthetase [Borrelia bissettii DN127]
Length = 425
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 130/220 (59%), Gaps = 13/220 (5%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E G
Sbjct: 205 IGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G++ E+ S SNC DYQSRRL +RY GQ+K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQSKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYL 211
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 95/158 (60%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G++ E+ S SNC YQSRRL +RY K + + +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRY---KDQDGQSKFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|86149043|ref|ZP_01067275.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88597260|ref|ZP_01100495.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
gi|148926480|ref|ZP_01810163.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
gi|218562047|ref|YP_002343826.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|384447677|ref|YP_005655728.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
gi|403055170|ref|YP_006632575.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|419619086|ref|ZP_14152598.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 129-258]
gi|419624384|ref|ZP_14157493.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23218]
gi|419625433|ref|ZP_14158449.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|419629891|ref|ZP_14162604.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 60004]
gi|419631910|ref|ZP_14164478.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23264]
gi|419632818|ref|ZP_14165270.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23269]
gi|419637382|ref|ZP_14169553.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|419639686|ref|ZP_14171704.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 86605]
gi|419647385|ref|ZP_14178790.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 53161]
gi|419648535|ref|ZP_14179873.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|419656143|ref|ZP_14186965.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-988]
gi|419661351|ref|ZP_14191677.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-831]
gi|419666813|ref|ZP_14196805.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-10]
gi|419670866|ref|ZP_14200549.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-14]
gi|419673353|ref|ZP_14202823.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 51037]
gi|419676256|ref|ZP_14205480.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 110-21]
gi|419676917|ref|ZP_14206079.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 87330]
gi|419678399|ref|ZP_14207453.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 87459]
gi|419685492|ref|ZP_14214042.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1577]
gi|419690320|ref|ZP_14218531.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1893]
gi|419692110|ref|ZP_14220210.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1928]
gi|424850488|ref|ZP_18274899.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni D2600]
gi|30173219|sp|Q9PIB3.1|SYS_CAMJE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|85840401|gb|EAQ57658.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190321|gb|EAQ94295.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359753|emb|CAL34539.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|145844643|gb|EDK21749.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
gi|284925660|gb|ADC28012.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
gi|356486756|gb|EHI16730.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni D2600]
gi|380593166|gb|EIB14008.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 129-258]
gi|380598802|gb|EIB19191.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23218]
gi|380604904|gb|EIB24902.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|380607053|gb|EIB26935.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 60004]
gi|380609795|gb|EIB29434.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23264]
gi|380613527|gb|EIB33002.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23269]
gi|380615444|gb|EIB34699.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|380615569|gb|EIB34811.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 86605]
gi|380620566|gb|EIB39443.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 53161]
gi|380626282|gb|EIB44763.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|380635827|gb|EIB53592.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-988]
gi|380640107|gb|EIB57567.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-831]
gi|380647263|gb|EIB64187.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-10]
gi|380649956|gb|EIB66623.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 110-21]
gi|380650178|gb|EIB66829.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-14]
gi|380653880|gb|EIB70273.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 51037]
gi|380655276|gb|EIB71593.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 87330]
gi|380660825|gb|EIB76760.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 87459]
gi|380663706|gb|EIB79334.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1577]
gi|380669141|gb|EIB84434.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1893]
gi|380670886|gb|EIB86127.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1928]
gi|401780822|emb|CCK66516.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
Length = 411
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|452957714|gb|EME63077.1| seryl-tRNA ligase [Rhodococcus ruber BKS 20-38]
Length = 420
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 113/194 (58%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L + P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLSGGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P D + ++ + A + + YRV+++ G L +AA+K D EAW
Sbjct: 280 VEMFVYCKPEDATAEHQ--RLLAWERDMLAAIEVPYRVIDVAGGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL VRY K +I AT ATTR + AILE HQ
Sbjct: 338 PTQERYRELTSTSNCTTFQARRLGVRYRDENGKPQIAATLNGTLATTRWLVAILENHQQA 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 398 DGSVRVPSALVPFV 411
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D + ++ + A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVYCKPEDATAEH--QRLLAWERDMLAAIEVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQERYRELTSTSNCTTFQARRLGVRY---RDENGKPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 381 LATTRWLVAILENHQQADGSVRVPSALVPFV 411
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H L + P RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLSGGPKRYAGWSSCFRREA 261
>gi|283955812|ref|ZP_06373303.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
gi|283792767|gb|EFC31545.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
Length = 411
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDALKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDALKKY 410
>gi|270284441|ref|ZP_06193999.1| serine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
gi|270276877|gb|EFA22731.1| serine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
Length = 392
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD+YL+ TSE + +H D L ++ P+RY G S+C+R+E GS G+DT+GI RVHQF
Sbjct: 186 EPDDQYLVGTSEVALAGMHEDEILDLSNGPLRYCGWSSCYRREAGSAGKDTQGIIRVHQF 245
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P D S+ ++ EE + + YRV++ +G L +AA+K D EA
Sbjct: 246 DKVEMFVYAKPED--SYDEHKHLLAMEEEMLGKVEVPYRVIDTAAGDLGSSAARKFDCEA 303
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILETHQ 191
W P G +REL S SNC YQ+RRL +R G ATTR + AI+E HQ
Sbjct: 304 WVPTQGRYRELTSTSNCTQYQARRLNIRERIADGGTEPVATLNGTLATTRWLVAIMENHQ 363
Query: 192 TETG-VRIPDCLRKFV 206
+ G + IP +R ++
Sbjct: 364 QKDGSIVIPTAMRPYM 379
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GI RVHQF+KVE FV P D S+ ++ EE + + YRV++ +G
Sbjct: 232 AGKDTQGIIRVHQFDKVEMFVYAKPED--SYDEHKHLLAMEEEMLGKVEVPYRVIDTAAG 289
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AA+K D EAW P G +REL S SNC YQ+RRL +R + + E V LN
Sbjct: 290 DLGSSAARKFDCEAWVPTQGRYRELTSTSNCTQYQARRLNIR---ERIADGGTEPVATLN 346
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
T ATTR + AI+E HQ + G + IP +R ++ V E
Sbjct: 347 GT-LATTRWLVAIMENHQQKDGSIVIPTAMRPYMGGKEVIE 386
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD+YL+ TSE + +H D L ++ P+RY G S+C+R+E
Sbjct: 186 EPDDQYLVGTSEVALAGMHEDEILDLSNGPLRYCGWSSCYRREA 229
>gi|121613220|ref|YP_001000100.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
gi|167005058|ref|ZP_02270816.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
gi|166228636|sp|A1VYA9.1|SYS_CAMJJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|87250089|gb|EAQ73047.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
Length = 411
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|157414684|ref|YP_001481940.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
gi|384441041|ref|YP_005657344.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
gi|415744571|ref|ZP_11474600.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
gi|419635647|ref|ZP_14167949.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 55037]
gi|172047058|sp|A8FKH6.1|SYS_CAMJ8 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|157385648|gb|ABV51963.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
gi|307747324|gb|ADN90594.1| Seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
gi|315932677|gb|EFV11607.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
gi|380612423|gb|EIB31950.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 55037]
Length = 411
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDALKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDALKKY 410
>gi|419659873|ref|ZP_14190380.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-979]
gi|380638328|gb|EIB55899.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-979]
Length = 411
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|386284906|ref|ZP_10062125.1| seryl-tRNA synthetase [Sulfurovum sp. AR]
gi|385344309|gb|EIF51026.1| seryl-tRNA synthetase [Sulfurovum sp. AR]
Length = 414
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 118/198 (59%), Gaps = 8/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ ++ D L E LP+ G + CFR+E GS GRDTRG+ R H
Sbjct: 219 KIEEEDLYLIPTAEVPLTNMYHDEILAEKDLPVLMTGYTPCFRKEAGSAGRDTRGMIRQH 278
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+KVE + P D+S ++ + M+QN+ + LG+ +RVV + G L +AA +DL
Sbjct: 279 QFDKVEMVAIAHP--DKSDEVFEMMVQNASDILTSLGLPHRVVELCGGDLGFSAATTIDL 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-----ATACATTRVICAILET 189
E W PG +RE+ S SN D+Q+RR +R+ K+ + +A A R + AI+E
Sbjct: 337 EVWLPGQNKYREISSISNTRDFQARRAKIRFKDGKKNRFVHTLNGSALAVGRTLIAIMEN 396
Query: 190 HQTETG-VRIPDCLRKFV 206
+Q E G + IP L+K++
Sbjct: 397 YQNEDGSITIPTVLQKYM 414
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 7/154 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF+KVE + P D+S + + M+QN+ + LG+ +RVV + G
Sbjct: 267 AGRDTRGMIRQHQFDKVEMVAIAHP--DKSDEVFEMMVQNASDILTSLGLPHRVVELCGG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AA +DLE W PG +RE+ S SN +Q+RR +R+ KK FVH LN
Sbjct: 325 DLGFSAATTIDLEVWLPGQNKYREISSISNTRDFQARRAKIRFKDGKKN----RFVHTLN 380
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+A A R + AI+E +Q E G + IP L+K++
Sbjct: 381 GSALAVGRTLIAIMENYQNEDGSITIPTVLQKYM 414
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLI T+E P+ ++ D L E LP+ G + CFR+E + GM R +
Sbjct: 219 KIEEEDLYLIPTAEVPLTNMYHDEILAEKDLPVLMTGYTPCFRKEAGSAGRDTRGMIRQH 278
>gi|355745502|gb|EHH50127.1| hypothetical protein EGM_00903, partial [Macaca fascicularis]
Length = 368
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 84/95 (88%)
Query: 76 FEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
++ +EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIVSG+LNHAA+KKLDLE
Sbjct: 247 YKVIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLE 306
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ 170
AWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 307 AWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 341
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 85/99 (85%)
Query: 313 FEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 372
++ +EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LNHAA+KKLDLE
Sbjct: 247 YKVIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLE 306
Query: 373 AWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEK 411
AWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K
Sbjct: 307 AWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDK 345
>gi|357465105|ref|XP_003602834.1| Seryl-tRNA synthetase [Medicago truncatula]
gi|355491882|gb|AES73085.1| Seryl-tRNA synthetase [Medicago truncatula]
Length = 546
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 22/207 (10%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+ LI T+E P+ +H DS L E+ LP++Y+ S CFR E G+ G TRG++RVHQF K+
Sbjct: 332 DQCLIGTAEIPVGGLHMDSILAESMLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKI 391
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E F+ P + + + +E+I+ E+ ++ LG+ ++ +++ S L A +K D+EAW P
Sbjct: 392 EMFIFCRPEESDYYH--EELIKIEEDMFSSLGLHFKTLDMASEDLGAPAYRKFDVEAWMP 449
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKQK-----------IYATACATT 180
G F E+ S SNC DYQSRRL +RY G K K + ATACA
Sbjct: 450 GLERFGEISSASNCTDYQSRRLGIRYRPSEVLVPGPKKSKGNLAPPQFVHTLNATACAVP 509
Query: 181 RVICAILETHQTETG-VRIPDCLRKFV 206
R+I +LE +Q E G V IP+ LR F+
Sbjct: 510 RMIICLLENYQQEDGSVLIPEPLRPFM 536
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 99/169 (58%), Gaps = 13/169 (7%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
+E A TRG++RVHQF K+E F+ P + + + +E+I+ E+ ++ LG+ ++ +
Sbjct: 370 TEAGAAGTATRGLYRVHQFSKIEMFIFCRPEESDYYH--EELIKIEEDMFSSLGLHFKTL 427
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY----------GQ 404
++ S L A +K D+EAW PG F E+ S SNC YQSRRL +RY +
Sbjct: 428 DMASEDLGAPAYRKFDVEAWMPGLERFGEISSASNCTDYQSRRLGIRYRPSEVLVPGPKK 487
Query: 405 TKKMNEKIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+K +FVH LNATACA R+I +LE +Q E G V IP+ LR F+
Sbjct: 488 SKGNLAPPQFVHTLNATACAVPRMIICLLENYQQEDGSVLIPEPLRPFM 536
Score = 46.6 bits (109), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRT 583
D+ LI T+E P+ +H DS L E+ LP++Y+ S CFR E A T
Sbjct: 332 DQCLIGTAEIPVGGLHMDSILAESMLPLKYVAFSHCFRTEAGAAGTAT 379
>gi|383783221|ref|YP_005467788.1| putative seryl-tRNA synthetase [Actinoplanes missouriensis 431]
gi|381376454|dbj|BAL93272.1| putative seryl-tRNA synthetase [Actinoplanes missouriensis 431]
Length = 420
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + A H + + ++ P R+ G STC+R+E GSHG+D RGI RVHQF
Sbjct: 217 EADDLYLVGTSEVALAAYHTNEIIDLSNGPERFAGWSTCYRREAGSHGKDVRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F P D + ++ EE A + I YRV+++ +G L +A++K D EA
Sbjct: 277 DKVEMFSFCRPED--ALAEHQRLLAMEEEMLAKVEIPYRVIDVAAGDLGTSASRKYDCEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P G +RE+ S SNC +Q+RRL VRY K +I AT ATTR + ILE HQ
Sbjct: 335 WVPSQGRYREVTSTSNCTTFQARRLNVRYRDENGKTQIAATLNGTLATTRWLIPILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L+ F+
Sbjct: 395 QPDGSVRVPKALQPFL 410
Score = 120 bits (300), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI RVHQF+KVE F P D + ++ EE A + I YRV+++ +G L
Sbjct: 266 DVRGILRVHQFDKVEMFSFCRPED--ALAEHQRLLAMEEEMLAKVEIPYRVIDVAAGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P G +RE+ S SNC +Q+RRL VRY + N K + LN T
Sbjct: 324 TSASRKYDCEAWVPSQGRYREVTSTSNCTTFQARRLNVRY---RDENGKTQIAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + ILE HQ G VR+P L+ F+
Sbjct: 380 LATTRWLIPILENHQQPDGSVRVPKALQPFL 410
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + A H + + ++ P R+ G STC+R+E
Sbjct: 217 EADDLYLVGTSEVALAAYHTNEIIDLSNGPERFAGWSTCYRREA 260
>gi|424847221|ref|ZP_18271803.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NW]
gi|356485508|gb|EHI15501.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NW]
Length = 411
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|86151194|ref|ZP_01069409.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
gi|315123949|ref|YP_004065953.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841541|gb|EAQ58788.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
gi|315017671|gb|ADT65764.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 411
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|419627260|ref|ZP_14160168.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|380606950|gb|EIB26834.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23263]
Length = 411
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|365088278|ref|ZP_09327875.1| seryl-tRNA synthetase [Acidovorax sp. NO-1]
gi|363417258|gb|EHL24343.1| seryl-tRNA synthetase [Acidovorax sp. NO-1]
Length = 438
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 122/213 (57%), Gaps = 12/213 (5%)
Query: 4 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSH 63
KG + G+ P+ L YLI TSE P+ RD + EA LPIR + CFR E GS+
Sbjct: 226 KGGQDGEPVPDNAAL---YLIPTSEVPLTNFVRDVVVAEADLPIRLTAHTPCFRSEAGSY 282
Query: 64 GRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGA 123
GRDTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRV+++ +G
Sbjct: 283 GRDTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAEAVLQKLGLPYRVMSLCTGD 340
Query: 124 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATAC 177
+ AAK DLE W P +RE+ S SNC +Q+RRL R+ + K + +
Sbjct: 341 MGFGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKNELLHTLNGSGL 400
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFVPAV 209
A R + A+LE +Q G V +P+ LR ++ V
Sbjct: 401 AVGRTLVAVLENYQQADGSVTVPEVLRPYMGGV 433
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 6/156 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRV+++ +G +
Sbjct: 285 DTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAEAVLQKLGLPYRVMSLCTGDMG 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK DLE W P +RE+ S SNC A+Q+RRL R+ K K E +H LN +
Sbjct: 343 FGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARF---KNAQGKNELLHTLNGSG 399
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
A R + A+LE +Q G V +P+ LR ++ V V
Sbjct: 400 LAVGRTLVAVLENYQQADGSVTVPEVLRPYMGGVAV 435
Score = 44.3 bits (103), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 520 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA- 578
KG + G+ P+ L YLI TSE P+ RD + EA LPIR + CFR E +
Sbjct: 226 KGGQDGEPVPDNAAL---YLIPTSEVPLTNFVRDVVVAEADLPIRLTAHTPCFRSEAGSY 282
Query: 579 -----GMCRTY 584
GM R +
Sbjct: 283 GRDTRGMIRQH 293
>gi|347821096|ref|ZP_08874530.1| seryl-tRNA synthetase [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 439
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 120/210 (57%), Gaps = 12/210 (5%)
Query: 4 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSH 63
KG + + AP+ L YLI TSE P+ RD L +A LPI+ + CFR E GSH
Sbjct: 226 KGGQDAEPAPDNAAL---YLIPTSEVPLTNFVRDVVLSQAQLPIKLTAHTPCFRSEAGSH 282
Query: 64 GRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGA 123
GRDTRG+ R+HQF+KVE + H ++S+ L+EM +++E L + YRV+++ +G
Sbjct: 283 GRDTRGMIRLHQFDKVEMVQIV--HPEKSYAALEEMTRHAERVLQALNLPYRVMSLCTGD 340
Query: 124 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATAC 177
+ AAK DLE W P +RE+ S SNC D+Q+RRL R+ + K + +
Sbjct: 341 IGFGAAKTYDLEVWLPAQNGYREISSVSNCEDFQARRLQARFKTAQGKNELVHTLNGSGL 400
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFV 206
A R + A+LE HQ G V +P LR ++
Sbjct: 401 AVGRTLAAVLENHQRADGSVELPQVLRPYM 430
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R+HQF+KVE + H ++S+ L+EM +++E L + YRV+++ +G +
Sbjct: 285 DTRGMIRLHQFDKVEMVQIV--HPEKSYAALEEMTRHAERVLQALNLPYRVMSLCTGDIG 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK DLE W P +RE+ S SNC +Q+RRL R+ K K E VH LN +
Sbjct: 343 FGAAKTYDLEVWLPAQNGYREISSVSNCEDFQARRLQARF---KTAQGKNELVHTLNGSG 399
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
A R + A+LE HQ G V +P LR ++ V
Sbjct: 400 LAVGRTLAAVLENHQRADGSVELPQVLRPYMGGTSV 435
>gi|157413737|ref|YP_001484603.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
gi|166987315|sp|A8G5Y6.1|SYS_PROM2 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|157388312|gb|ABV51017.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 425
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 8/202 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +L T+E P+ A HR+ + LPI+Y+ S CFR+E GS+G+DT+G+ R+HQF K
Sbjct: 226 DDLWLSPTAEVPLTAFHRNELIDPKQLPIKYVAYSPCFRREAGSYGKDTKGLIRLHQFNK 285
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P +S + ++ ++E + L + YR+V+I +G L ++++ DLE W
Sbjct: 286 VELYWFCDP--TKSLEAHKKITSDAENIFKKLNLPYRIVDICTGDLGFSSSRTFDLEVWL 343
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-----ATACATTRVICAILET-HQT 192
P S +RE+ SCSNCLD+Q+RR +R K+ IY + A R + AILE QT
Sbjct: 344 PSSKCYREISSCSNCLDFQARRSSIRSKIDKKNIYLHTLNGSGLAIGRTMAAILENGQQT 403
Query: 193 ETGVRIPDCLRKFVPAVYLNEA 214
+ V+IPD L + + +L A
Sbjct: 404 DGSVKIPDALVPYFGSNFLKNA 425
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 94/159 (59%), Gaps = 7/159 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G+ R+HQF KVE + P +S + ++ ++E + L + YR+V+I +G L
Sbjct: 273 DTKGLIRLHQFNKVELYWFCDP--TKSLEAHKKITSDAENIFKKLNLPYRIVDICTGDLG 330
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++++ DLE W P S +RE+ SCSNCL +Q+RR +R K+++K ++H LN +
Sbjct: 331 FSSSRTFDLEVWLPSSKCYREISSCSNCLDFQARRSSIR----SKIDKKNIYLHTLNGSG 386
Query: 423 CATTRVICAILET-HQTETGVRIPDCLRKFVPAVYVNEA 460
A R + AILE QT+ V+IPD L + + ++ A
Sbjct: 387 LAIGRTMAAILENGQQTDGSVKIPDALVPYFGSNFLKNA 425
Score = 43.5 bits (101), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DD +L T+E P+ A HR+ + LPI+Y+ S CFR+E +
Sbjct: 226 DDLWLSPTAEVPLTAFHRNELIDPKQLPIKYVAYSPCFRREAGS 269
>gi|325295343|ref|YP_004281857.1| seryl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065791|gb|ADY73798.1| Seryl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 428
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 121/199 (60%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D +LI T+E P+ +H LPE LP Y + CFR+E G+HGRD RGI R+H
Sbjct: 223 KIENEDLWLIPTAEVPLTNIHAGEILPEKELPKYYTAYTPCFRREAGAHGRDVRGIMRLH 282
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVE + P + S++ L+++++ +E+ LG+ YRVV + +G L +AAK D+
Sbjct: 283 QFNKVELVKIVHP--ETSYEELEKLVREAEKVLQLLGLHYRVVELCTGDLGFSAAKTYDI 340
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKIYATACATTRVICAILE 188
E W P +RE+ SCSNC D+Q+RR +R+ G+T+ + + A R + AILE
Sbjct: 341 EVWIPSQNKYREISSCSNCEDFQARRAKIRFRDKNGKTRFVHTLNGSGLAVGRTVIAILE 400
Query: 189 THQTETG-VRIPDCLRKFV 206
+Q E G V +P+ LR ++
Sbjct: 401 QYQQEDGSVIVPEVLRDYI 419
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 92/151 (60%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI R+HQF KVE + P + S++ L+++++ +E+ LG+ YRVV + +G L
Sbjct: 274 DVRGIMRLHQFNKVELVKIVHP--ETSYEELEKLVREAEKVLQLLGLHYRVVELCTGDLG 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK D+E W P +RE+ SCSNC +Q+RR +R+ + N K FVH LN +
Sbjct: 332 FSAAKTYDIEVWIPSQNKYREISSCSNCEDFQARRAKIRF---RDKNGKTRFVHTLNGSG 388
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + AILE +Q E G V +P+ LR ++
Sbjct: 389 LAVGRTVIAILEQYQQEDGSVIVPEVLRDYI 419
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D +LI T+E P+ +H LPE LP Y + CFR+E A
Sbjct: 223 KIENEDLWLIPTAEVPLTNIHAGEILPEKELPKYYTAYTPCFRREAGA 270
>gi|423349280|ref|ZP_17326936.1| seryl-tRNA synthetase [Scardovia wiggsiae F0424]
gi|393702828|gb|EJD65030.1| seryl-tRNA synthetase [Scardovia wiggsiae F0424]
Length = 428
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD+YL+ TSE + +H D L ++ P+RY G S+C+R+E GS G+DT GI RVHQF
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGPLRYAGWSSCYRREAGSAGKDTMGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVE FV D + +++ +E A + + YR+++ +G L +AA+K D EA
Sbjct: 282 NKVEMFVYCRQEDSRAEHQ--HLLEMEQEMLAKVEVPYRIIDTAAGDLGASAARKFDCEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P G +REL S SNC +YQ+RRL +R + A A ATTR + AILE HQ
Sbjct: 340 WVPTQGRYRELTSTSNCTEYQARRLNIRERMEEGGTRAVATLNGTLATTRWLVAILENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
+ G V IP+ LR ++
Sbjct: 400 QKDGSVEIPEALRPYM 415
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF KVE FV D S +++ +E A + + YR+++ +G
Sbjct: 268 AGKDTMGIIRVHQFNKVEMFVYCRQED--SRAEHQHLLEMEQEMLAKVEVPYRIIDTAAG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-KIEFVHML 418
L +AA+K D EAW P G +REL S SNC YQ+RRL +R ++M E V L
Sbjct: 326 DLGASAARKFDCEAWVPTQGRYRELTSTSNCTEYQARRLNIR----ERMEEGGTRAVATL 381
Query: 419 NATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
N T ATTR + AILE HQ + G V IP+ LR ++
Sbjct: 382 NGT-LATTRWLVAILENHQQKDGSVEIPEALRPYM 415
Score = 46.2 bits (108), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD+YL+ TSE + +H D L ++ P+RY G S+C+R+E
Sbjct: 222 EPDDQYLVGTSEVALAGMHEDEILDLSNGPLRYAGWSSCYRREA 265
>gi|392940049|ref|ZP_10305693.1| seryl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
gi|392291799|gb|EIW00243.1| seryl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
Length = 423
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++RD+ + LPI + S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D+S++ L++M +++EE LG+ YRVV I +G L A+KK D+E W P
Sbjct: 284 ELVKFTDP--DKSYEELEKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEISSCSNCEDFQARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 402 EDGSVVIPEVLRPYM 416
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE T P D+S++ L++M +++EE LG+ YRVV I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKFTDP--DKSYEELEKMTRDAEEVLQALGLPYRVVAICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L A+KK D+E W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V IP+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|403238563|ref|ZP_10917149.1| seryl-tRNA ligase [Bacillus sp. 10403023]
Length = 426
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 113/198 (57%), Gaps = 10/198 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E +D +LI T+E PI +HRD L LPI Y S CFR E GS GRDTRG+ R HQF
Sbjct: 222 ESEDYFLIPTAEVPITNLHRDEILSGEQLPINYAAFSACFRSEAGSAGRDTRGLIRQHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVE P D S+ L+++ N+E+ LG+ YRV+N+ S L AAKK D+E
Sbjct: 282 NKVELVKFVKPED--SYAELEKLTGNAEKVLQLLGLPYRVLNMCSADLGFTAAKKYDIEV 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAILET 189
W P G +RE+ SCSN +Q+RR +R+ + + + + A R + AILE
Sbjct: 340 WLPSYGTYREISSCSNFESFQARRANIRFRRDRDSKPEHVHTLNGSGLAIGRTVAAILEN 399
Query: 190 HQTETG-VRIPDCLRKFV 206
+Q E G V IP+ LR ++
Sbjct: 400 YQQEDGTVLIPEVLRPYM 417
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE P D S+ L+++ N+E+ LG+ YRV+
Sbjct: 263 SEAGSAGRDTRGLIRQHQFNKVELVKFVKPED--SYAELEKLTGNAEKVLQLLGLPYRVL 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
N+ S L AAKK D+E W P G +RE+ SCSN ++Q+RR +R+ + + + K E
Sbjct: 321 NMCSADLGFTAAKKYDIEVWLPSYGTYREISSCSNFESFQARRANIRFRRDR--DSKPEH 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH LN + A R + AILE +Q E G V IP+ LR ++
Sbjct: 379 VHTLNGSGLAIGRTVAAILENYQQEDGTVLIPEVLRPYM 417
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
E +D +LI T+E PI +HRD L LPI Y S CFR E +
Sbjct: 222 ESEDYFLIPTAEVPITNLHRDEILSGEQLPINYAAFSACFRSEAGSA 268
>gi|397654951|ref|YP_006495634.1| seryl-tRNA synthetase [Corynebacterium ulcerans 0102]
gi|393403907|dbj|BAM28399.1| seryl-tRNA synthetase [Corynebacterium ulcerans 0102]
Length = 419
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D + + +++ + A + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 335 WIPTQNTYRELTSTSNCTTFQARRLQTRYRDESGKAQTCATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVIVPEALRPFV 410
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D + + +++ + A + + YRV+++ G L
Sbjct: 266 DTRGILRVHQFDKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 324 SSAARKFDTEAWIPTQNTYRELTSTSNCTTFQARRLQTRY---RDESGKAQTCATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVIVPEALRPFV 410
Score = 43.9 bits (102), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREA 260
>gi|326390337|ref|ZP_08211896.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325993614|gb|EGD52047.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 423
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++RD+ + LPI + S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D+S++ L++M +++EE LG+ YRVV I +G L A+KK D+E W P
Sbjct: 284 ELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEISSCSNCEDFQARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 402 EDGSVVIPEVLRPYM 416
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE T P D+S++ L++M +++EE LG+ YRVV I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVAICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L A+KK D+E W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V IP+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|317511243|ref|ZP_07968587.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
gi|315929261|gb|EFV08477.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
Length = 411
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRSKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRSKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|419644711|ref|ZP_14176286.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9081]
gi|380621609|gb|EIB40406.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9081]
Length = 411
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|256374275|ref|YP_003097935.1| seryl-tRNA synthetase [Actinosynnema mirum DSM 43827]
gi|255918578|gb|ACU34089.1| seryl-tRNA synthetase [Actinosynnema mirum DSM 43827]
Length = 416
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 113/196 (57%), Gaps = 11/196 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H D + P RY G S+C+R+E GS+G+DTRGI RVHQF
Sbjct: 218 EADDLYLVGTSEVPLAGYHADEII---DGPRRYAGWSSCYRREAGSYGKDTRGIIRVHQF 274
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVE F P + E+ ++ EE A + + YRV++ +G L +A++K D EA
Sbjct: 275 NKVEMFSYVPPEEAEAEHA--RLLAWEEEMLAKVEVPYRVIDTAAGDLGTSASRKFDCEA 332
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P A+REL S SNC +Q+RRL VRY K TA ATTR I AILE HQ
Sbjct: 333 WVPSQQAYRELTSTSNCTTFQARRLNVRYRDENGKSQITATLNGTLATTRWIVAILENHQ 392
Query: 192 TETG-VRIPDCLRKFV 206
G V +P LR F+
Sbjct: 393 QADGSVVVPQALRPFL 408
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE F P + E+ ++ EE A + + YRV++ +G L
Sbjct: 264 DTRGIIRVHQFNKVEMFSYVPPEEAEAEHA--RLLAWEEEMLAKVEVPYRVIDTAAGDLG 321
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P A+REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 322 TSASRKFDCEAWVPSQQAYRELTSTSNCTTFQARRLNVRY---RDENGKSQITATLNGT- 377
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V +P LR F+
Sbjct: 378 LATTRWIVAILENHQQADGSVVVPQALRPFL 408
>gi|117929311|ref|YP_873862.1| seryl-tRNA synthetase [Acidothermus cellulolyticus 11B]
gi|166200590|sp|A0LWR6.1|SYS_ACIC1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|117649774|gb|ABK53876.1| seryl-tRNA synthetase [Acidothermus cellulolyticus 11B]
Length = 420
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + A H L A LP RY+G STCFR+E GSHG+DTRGI RVHQF
Sbjct: 218 EKDDFYLVGTSEVSLAAYHMGEILDAAQLPRRYVGFSTCFRREAGSHGKDTRGIIRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE F T+ E+ +++ ++F L I +RV+++ +G L +AA+K D EA
Sbjct: 278 DKVEMFSFTTV--GEAAAEHRRLLEWEKQFLTALEIPFRVIDVATGDLGASAARKFDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILETHQ 191
W P G +RE+ S SNC ++Q+RRL +R + + T A R I A+LE HQ
Sbjct: 336 WIPTQGRYREVTSTSNCTEFQARRLDIRMRDEQGIRPLATLNGTLVAIPRTIVAVLENHQ 395
Query: 192 TETG-VRIPDCLRKFV 206
G V +P LR ++
Sbjct: 396 QADGSVVVPRALRDYL 411
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F T+ E+ +++ ++F L I +RV+++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFSFTTV--GEAAAEHRRLLEWEKQFLTALEIPFRVIDVATGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P G +RE+ S SNC +Q+RRL +R + + I + LN T
Sbjct: 325 ASAARKFDCEAWIPTQGRYREVTSTSNCTEFQARRLDIRM----RDEQGIRPLATLNGTL 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R I A+LE HQ G V +P LR ++
Sbjct: 381 VAIPRTIVAVLENHQQADGSVVVPRALRDYL 411
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + A H L A LP RY+G STCFR+E
Sbjct: 218 EKDDFYLVGTSEVSLAAYHMGEILDAAQLPRRYVGFSTCFRREA 261
>gi|15594571|ref|NP_212360.1| seryl-tRNA synthetase [Borrelia burgdorferi B31]
gi|218249339|ref|YP_002374749.1| seryl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|221217803|ref|ZP_03589271.1| seryl-tRNA synthetase [Borrelia burgdorferi 72a]
gi|224533697|ref|ZP_03674285.1| seryl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|225550215|ref|ZP_03771175.1| seryl-tRNA synthetase [Borrelia burgdorferi 118a]
gi|226321544|ref|ZP_03797070.1| seryl-tRNA synthetase [Borrelia burgdorferi Bol26]
gi|387827142|ref|YP_005806424.1| seryl-tRNA synthetase [Borrelia burgdorferi N40]
gi|3915062|sp|O51244.1|SYS_BORBU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226701651|sp|B7J1F4.1|SYS_BORBZ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2688129|gb|AAC66622.1| seryl-tRNA synthetase [Borrelia burgdorferi B31]
gi|218164527|gb|ACK74588.1| seryl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|221192480|gb|EEE18699.1| seryl-tRNA synthetase [Borrelia burgdorferi 72a]
gi|224512990|gb|EEF83353.1| seryl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|225369327|gb|EEG98780.1| seryl-tRNA synthetase [Borrelia burgdorferi 118a]
gi|226232733|gb|EEH31486.1| seryl-tRNA synthetase [Borrelia burgdorferi Bol26]
gi|312148980|gb|ADQ29051.1| seryl-tRNA synthetase [Borrelia burgdorferi N40]
Length = 425
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 130/228 (57%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E G
Sbjct: 205 IGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G + E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
TA ATTRVI +ILE Q + GVRIP L K+ Y IPF
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDY------IPF 423
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G + E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|225552155|ref|ZP_03773095.1| seryl-tRNA synthetase [Borrelia sp. SV1]
gi|225371153|gb|EEH00583.1| seryl-tRNA synthetase [Borrelia sp. SV1]
Length = 425
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 128/220 (58%), Gaps = 13/220 (5%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E G
Sbjct: 205 IGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G + E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGGYGEITSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYL 211
TA ATTRVI +ILE Q + G+RIP L K+ Y+
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGIRIPKSLVKYTGFDYI 421
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G + E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGGYGEITSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q + G+RIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDQKGGIRIPKSLVKYTGFDYI 421
>gi|15605830|ref|NP_213207.1| seryl-tRNA synthetase [Aquifex aeolicus VF5]
gi|3915066|sp|O66647.1|SYS_AQUAE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2982982|gb|AAC06595.1| seryl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 425
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+ YLI T+E P+ ++R+ L E +LPI + C+R+E G++G+D RGI R HQF
Sbjct: 222 ERDNLYLIPTAEVPLTNLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE + P D S+ L+++++++EE LG+ YRVV + +G L +AAK D+E
Sbjct: 282 DKVELVKIVHP--DTSYDELEKLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYDIEV 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAILET 189
WFP +RE+ SCSNC D+Q+RR+ R+ +K + + A R + AILE
Sbjct: 340 WFPSQNKYREISSCSNCEDFQARRMNTRFKDSKTGKNRFVHTLNGSGLAVGRTLAAILEN 399
Query: 190 HQTETG-VRIPDCLRKFV 206
+Q E G V +P+ LR +V
Sbjct: 400 YQQEDGSVVVPEVLRDYV 417
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 93/151 (61%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI R HQF+KVE + P D S+ L+++++++EE LG+ YRVV + +G L
Sbjct: 271 DIRGIIRQHQFDKVELVKIVHP--DTSYDELEKLVKDAEEVLQLLGLPYRVVELCTGDLG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK D+E WFP +RE+ SCSNC +Q+RR+ R+ +K K FVH LN +
Sbjct: 329 FSAAKTYDIEVWFPSQNKYREISSCSNCEDFQARRMNTRFKDSK--TGKNRFVHTLNGSG 386
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + AILE +Q E G V +P+ LR +V
Sbjct: 387 LAVGRTLAAILENYQQEDGSVVVPEVLRDYV 417
>gi|337291812|ref|YP_004630833.1| seryl-tRNA synthetase [Corynebacterium ulcerans BR-AD22]
gi|384516585|ref|YP_005711677.1| seryl-tRNA synthetase [Corynebacterium ulcerans 809]
gi|334697786|gb|AEG82583.1| Seryl-tRNA synthetase [Corynebacterium ulcerans 809]
gi|334700118|gb|AEG84914.1| Seryl-tRNA synthetase [Corynebacterium ulcerans BR-AD22]
Length = 427
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 225 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 284
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D + + +++ + A + + YRV+++ G L +AA+K D EA
Sbjct: 285 DKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLGSSAARKFDTEA 342
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 343 WIPTQNTYRELTSTSNCTTFQARRLQTRYRDESGKAQTCATLNGTLATTRWLVAILENNQ 402
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 403 QADGSVIVPEALRPFV 418
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D + + +++ + A + + YRV+++ G L
Sbjct: 274 DTRGILRVHQFDKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLG 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K + LN T
Sbjct: 332 SSAARKFDTEAWIPTQNTYRELTSTSNCTTFQARRLQTRY---RDESGKAQTCATLNGT- 387
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 388 LATTRWLVAILENNQQADGSVIVPEALRPFV 418
Score = 43.9 bits (102), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + PI+Y G S+CFR+E
Sbjct: 225 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREA 268
>gi|345016475|ref|YP_004818828.1| seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344031818|gb|AEM77544.1| Seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 423
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++RD+ + LPI + S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D+S++ L++M +++EE LG+ YRVV I +G L A+KK D+E W P
Sbjct: 284 ELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEISSCSNCEDFQARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 402 EDGSVVIPEVLRPYM 416
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE T P D+S++ L++M +++EE LG+ YRVV I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVAICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L A+KK D+E W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V IP+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|111221587|ref|YP_712381.1| seryl-tRNA synthetase [Frankia alni ACN14a]
gi|111149119|emb|CAJ60802.1| Seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) [Frankia alni
ACN14a]
Length = 432
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 113/195 (57%), Gaps = 7/195 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL T+E + +H L A LPIRY G+S CFR+E+GS RD RG+ RVHQFEK
Sbjct: 232 DDLYLAGTAEVALVGLHAGEILDAARLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEK 291
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFVL + + ES + E++ +E +DLG+ Y VV +G + + D+ WF
Sbjct: 292 VEQFVLCAADEAESARWHAELLATAERILSDLGLCYEVVECATGDMGVGKFRMNDINTWF 351
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQT 192
P G FRE SCS D+Q+RR +RY I TA AT R++ A+LE QT
Sbjct: 352 PSLGRFRETHSCSTLHDWQARRANLRYRDPDGTIRFAHTLNNTAVATPRLLAALLENFQT 411
Query: 193 ETG-VRIPDCLRKFV 206
G VR+P+ LR ++
Sbjct: 412 ADGAVRVPEVLRPYL 426
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D RG+ RVHQFEKVEQFVL + + ES + E++ +E +DLG+ Y VV +G
Sbjct: 276 ASRDVRGLLRVHQFEKVEQFVLCAADEAESARWHAELLATAERILSDLGLCYEVVECATG 335
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+ + D+ WFP G FRE SCS +Q+RR +RY + + I F H LN
Sbjct: 336 DMGVGKFRMNDINTWFPSLGRFRETHSCSTLHDWQARRANLRY---RDPDGTIRFAHTLN 392
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
TA AT R++ A+LE QT G VR+P+ LR ++
Sbjct: 393 NTAVATPRLLAALLENFQTADGAVRVPEVLRPYL 426
Score = 47.0 bits (110), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 27/135 (20%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQRE- 593
DD YL T+E + +H L A LPIRY G+S CFR+E + A R+
Sbjct: 232 DDLYLAGTAEVALVGLHAGEILDAARLPIRYAGISPCFRRE-----------IGSASRDV 280
Query: 594 -GLLSEATSEEVDQ----ADPFYAHCRLHADKLEDFSKFSKILVCCVCLGERSDDVNEIV 648
GLL E+V+Q A R HA+ L + L C E+V
Sbjct: 281 RGLLRVHQFEKVEQFVLCAADEAESARWHAELLATAERILSDLGLCY----------EVV 330
Query: 649 ECDSCGVTVHEVKIQ 663
EC + + V + ++
Sbjct: 331 ECATGDMGVGKFRMN 345
>gi|392401456|ref|YP_006438056.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis Cp162]
gi|390532534|gb|AFM08263.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis Cp162]
Length = 419
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D + + +++ + A + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLQTRYRDENGKAQTCATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVIVPEALRPFV 410
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D + + +++ + A + + YRV+++ G L
Sbjct: 266 DTRGILRVHQFDKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 324 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLQTRY---RDENGKAQTCATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVIVPEALRPFV 410
Score = 43.9 bits (102), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREA 260
>gi|216263748|ref|ZP_03435742.1| seryl-tRNA synthetase [Borrelia afzelii ACA-1]
gi|215979792|gb|EEC20614.1| seryl-tRNA synthetase [Borrelia afzelii ACA-1]
Length = 425
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 128/220 (58%), Gaps = 13/220 (5%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E G
Sbjct: 205 IGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESSIIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G + E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGGYGEITSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYL 211
TA ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 382 NGTAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESSIIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G + E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGGYGEITSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
>gi|419696048|ref|ZP_14223927.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23210]
gi|380676278|gb|EIB91163.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23210]
Length = 411
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILVSETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|386814825|ref|ZP_10102043.1| seryl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386419401|gb|EIJ33236.1| seryl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 424
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 114/193 (59%), Gaps = 10/193 (5%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YLI T+E P+ + RD+ + A LP++Y + CFR E GS+G+DTRG+ R HQFEKVE
Sbjct: 227 YLIPTAEVPVTNLARDTIIDAADLPVKYACHTPCFRSEAGSYGKDTRGLIRQHQFEKVEM 286
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
L P D SW L+ + N+E LG+ YRV+ + +G ++AK D+E W PG
Sbjct: 287 VKLVRPED--SWAELESLTANAEAILQKLGLPYRVIVLCAGDTGFSSAKTYDIEVWLPGQ 344
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAILETHQTET 194
+RE+ SCSN +D+Q+RR++ RY + + + A R + A+LE +Q
Sbjct: 345 QKYREISSCSNFVDFQARRMMARYRNPETGKPELLHTLNGSGLAVGRTLVAVLENYQEAD 404
Query: 195 G-VRIPDCLRKFV 206
G +RIP+ LR ++
Sbjct: 405 GRIRIPEALRGYM 417
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQFEKVE L P D SW L+ + N+E LG+ YRV+ + +G
Sbjct: 271 DTRGLIRQHQFEKVEMVKLVRPED--SWAELESLTANAEAILQKLGLPYRVIVLCAGDTG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++AK D+E W PG +RE+ SCSN + +Q+RR++ RY + K E +H LN +
Sbjct: 329 FSSAKTYDIEVWLPGQQKYREISSCSNFVDFQARRMMARYRNPE--TGKPELLHTLNGSG 386
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + A+LE +Q G +RIP+ LR ++
Sbjct: 387 LAVGRTLVAVLENYQEADGRIRIPEALRGYM 417
>gi|379716256|ref|YP_005304593.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 316]
gi|387139543|ref|YP_005695522.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387141509|ref|YP_005697487.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 1/06-A]
gi|389851310|ref|YP_006353545.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 258]
gi|349736021|gb|AEQ07499.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355393300|gb|AER69965.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 1/06-A]
gi|377654962|gb|AFB73311.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 316]
gi|388248616|gb|AFK17607.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 258]
Length = 427
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 225 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 284
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D + + +++ + A + + YRV+++ G L +AA+K D EA
Sbjct: 285 DKLEMFVFCKPED--AVEQHQTLLKMERDMLAAVEVPYRVIDVAGGDLGSSAARKFDTEA 342
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 343 WVPTQNTYRELTSTSNCTTFQARRLQTRYRDENGKAQTCATLNGTLATTRWLVAILENNQ 402
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 403 QADGSVIVPEALRPFV 418
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDD-ESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
DTRGI RVHQF+K+E FV P D E +TL +M + A + + YRV+++ G L
Sbjct: 274 DTRGILRVHQFDKLEMFVFCKPEDAVEQHQTLLKM---ERDMLAAVEVPYRVIDVAGGDL 330
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 331 GSSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLQTRY---RDENGKAQTCATLNGT 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 388 -LATTRWLVAILENNQQADGSVIVPEALRPFV 418
Score = 43.9 bits (102), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + PI+Y G S+CFR+E
Sbjct: 225 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREA 268
>gi|419586864|ref|ZP_14122820.1| seryl-tRNA synthetase [Campylobacter coli 67-8]
gi|380565632|gb|EIA88353.1| seryl-tRNA synthetase [Campylobacter coli 67-8]
Length = 411
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI+TSE P+ ++ L SLPI+ S CFR+E GS GRDTRGI R H
Sbjct: 215 KIEDEDLYLISTSEIPVTNLYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE + P +S + +EM++ + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSIIKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P +RE+ S SNC D+Q+RR +RY K K + ++ A R + AI+E
Sbjct: 333 EVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G ++IPD L+K+
Sbjct: 393 NYQDKEGRIQIPDVLKKY 410
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE + P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSIIKPEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W P +RE+ S SNC +Q+RR +RY K N E VH LN
Sbjct: 321 DLGFSAAKTIDLEVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G ++IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGRIQIPDVLKKY 410
>gi|452819462|gb|EME26520.1| seryl-tRNA synthetase [Galdieria sulphuraria]
Length = 501
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
L+ T+E P+ + + L E SLPIR + CFR+EVGS G+ ++G++RVHQF KVE F
Sbjct: 306 LVGTAEIPLGGYYMNQILDEQSLPIRMVAFGHCFRKEVGSAGQASKGLYRVHQFTKVEMF 365
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
VL P ++S +L++++ E ++ LG +YRV+++ S L + A +K D+EAW PG
Sbjct: 366 VLCKP--NQSDALLEDLLNIQMEMFSSLGFSYRVLDMPSQDLGNPAYRKFDVEAWMPGRS 423
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTETG- 195
F E+ S SNC DYQ+RRL +RY + I+ ATACA R+I ILE Q G
Sbjct: 424 GFGEISSASNCTDYQARRLNIRYRDKQGNIHYVHTLNATACAIPRMIITILENFQLSNGE 483
Query: 196 VRIPDCLRKFV 206
+ IP+ L+ ++
Sbjct: 484 ILIPEPLQSYI 494
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 97/150 (64%), Gaps = 6/150 (4%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE FVL P+ ++ L++++ E ++ LG +YRV+++ S L +
Sbjct: 350 SKGLYRVHQFTKVEMFVLCKPNQSDAL--LEDLLNIQMEMFSSLGFSYRVLDMPSQDLGN 407
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 423
A +K D+EAW PG F E+ S SNC YQ+RRL +RY + K+ N I +VH LNATAC
Sbjct: 408 PAYRKFDVEAWMPGRSGFGEISSASNCTDYQARRLNIRY-RDKQGN--IHYVHTLNATAC 464
Query: 424 ATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R+I ILE Q G + IP+ L+ ++
Sbjct: 465 AIPRMIITILENFQLSNGEILIPEPLQSYI 494
>gi|374605568|ref|ZP_09678490.1| seryl-tRNA synthetase [Paenibacillus dendritiformis C454]
gi|374388782|gb|EHQ60182.1| seryl-tRNA synthetase [Paenibacillus dendritiformis C454]
Length = 424
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 12/209 (5%)
Query: 5 GEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHG 64
GE+ + PE D ++L+ TSE + A + + + S PIR G S+CFR+EVGS G
Sbjct: 214 GEEQTYALPE----DGRWLVGTSEVSLAAYY-SGEIVDVSEPIRLAGASSCFRREVGSAG 268
Query: 65 RDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGAL 124
RD RG++RVHQF KVEQ +LT ES +ML+EM+ ++E+ L + +RV+++ +G +
Sbjct: 269 RDVRGLYRVHQFAKVEQVILTRSDPAESNRMLEEMVAHAEDILQALELPFRVMDVCTGDM 328
Query: 125 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG------QTKQKIYATACA 178
+ K+ D+E W PG A+ E S SN LD+Q+RRL +RY Q + TA A
Sbjct: 329 SQKTYKQYDIETWMPGRAAYGETHSASNLLDFQARRLQIRYRDEDGALQYCHTLNNTAVA 388
Query: 179 TTRVICAILETHQTETG-VRIPDCLRKFV 206
+ R++ +LE HQ G VRIP+ LR ++
Sbjct: 389 SPRILIPLLENHQQADGSVRIPEALRPYM 417
Score = 126 bits (316), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 96/154 (62%), Gaps = 4/154 (2%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D RG++RVHQF KVEQ +LT ES + L+EM+ ++E+ L + +RV+++ +G
Sbjct: 267 AGRDVRGLYRVHQFAKVEQVILTRSDPAESNRMLEEMVAHAEDILQALELPFRVMDVCTG 326
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
++ K+ D+E W PG A+ E S SN L +Q+RRL +RY + + +++ H LN
Sbjct: 327 DMSQKTYKQYDIETWMPGRAAYGETHSASNLLDFQARRLQIRY---RDEDGALQYCHTLN 383
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
TA A+ R++ +LE HQ G VRIP+ LR ++
Sbjct: 384 NTAVASPRILIPLLENHQQADGSVRIPEALRPYM 417
>gi|224531827|ref|ZP_03672459.1| seryl-tRNA synthetase [Borrelia valaisiana VS116]
gi|224511292|gb|EEF81698.1| seryl-tRNA synthetase [Borrelia valaisiana VS116]
Length = 425
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 131/228 (57%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E G
Sbjct: 205 IGFNPRGNESNIYKIEGTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 TYGQLSKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLGIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G++ E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
TA ATTRVI +ILE Q E GVRIP L K+ Y IPF
Sbjct: 382 NGTAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDY------IPF 423
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 93/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLGIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G++ E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
>gi|419588118|ref|ZP_14123944.1| seryl-tRNA synthetase [Campylobacter coli 317/04]
gi|380570892|gb|EIA93306.1| seryl-tRNA synthetase [Campylobacter coli 317/04]
Length = 411
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI+TSE P+ ++ L SLPI+ S CFR+E GS GRDTRGI R H
Sbjct: 215 KIEDEDLYLISTSEIPVTNLYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE + P +S + +EM++ + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSIAKPEQSDS--VFNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P +RE+ S SNC D+Q+RR +RY K K + ++ A R + AI+E
Sbjct: 333 EVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G ++IPD L+K+
Sbjct: 393 NYQDKEGKIQIPDVLKKY 410
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE + P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSIAKPEQSDS--VFNEMVECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W P +RE+ S SNC +Q+RR +RY K N E VH LN
Sbjct: 321 DLGFSAAKTIDLEVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G ++IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIQIPDVLKKY 410
>gi|407279378|ref|ZP_11107848.1| seryl-tRNA ligase [Rhodococcus sp. P14]
Length = 420
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 113/194 (58%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H L + P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLSGGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE FV P D + ++ + A + + YRV+++ G L +AA+K D EAW
Sbjct: 280 VEMFVYCKPEDAVAEHQ--RLLAWERDMLAAIEVPYRVIDVAGGDLGSSAARKFDCEAWV 337
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL VRY K +I AT ATTR + AILE HQ
Sbjct: 338 PTQERYRELTSTSNCTTFQARRLGVRYRDENGKPQIAATLNGTLATTRWLVAILENHQQA 397
Query: 194 TG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 398 DGSVRVPSALVPFV 411
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P D + ++ + A + + YRV+++ G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVYCKPED--AVAEHQRLLAWERDMLAAIEVPYRVIDVAGGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 325 SSAARKFDCEAWVPTQERYRELTSTSNCTTFQARRLGVRY---RDENGKPQIAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE HQ G VR+P L FV
Sbjct: 381 LATTRWLVAILENHQQADGSVRVPSALVPFV 411
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H L + P RY G S+CFR+E
Sbjct: 220 DDLYLVGTSEVPLAGYHSGEILDLSGGPKRYAGWSSCFRREA 261
>gi|256751428|ref|ZP_05492306.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749647|gb|EEU62673.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 423
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++RD+ + LPI + S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D+S++ L++M +++EE LG+ YRVV I +G L A+KK D+E W P
Sbjct: 284 ELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVVICTGDLGFTASKKYDIEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEISSCSNCEDFQARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 402 EDGSVVIPEVLRPYM 416
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE T P D+S++ L++M +++EE LG+ YRVV I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVVICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L A+KK D+E W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V IP+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|410478026|ref|YP_006765663.1| seryl-tRNA synthetase [Leptospirillum ferriphilum ML-04]
gi|124516121|gb|EAY57629.1| Seryl-tRNA synthetase [Leptospirillum rubarum]
gi|406773278|gb|AFS52703.1| seryl-tRNA synthetase [Leptospirillum ferriphilum ML-04]
Length = 445
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 121/196 (61%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ LI T+E P+ ++RDS L LP++Y+ +TCFR+E G+ G+DTRG+ R HQF+K
Sbjct: 230 DNLVLIPTAEVPVTNLNRDSILEAEDLPLKYVASTTCFRREAGAAGKDTRGLIRQHQFQK 289
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE LTSP D S+ L+E+ Q++E+ LG+ +R + + +G L ++AK DLE W
Sbjct: 290 VELVWLTSP--DTSYDDLEELTQDAEQILEGLGLPFRRIALCTGDLGFSSAKTYDLEVWM 347
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIYAT----ACATTRVICAILETHQ 191
P G +RE+ SCSN D+Q+RR +RY G K ++ T A R I AILE Q
Sbjct: 348 PAQGVYREISSCSNFEDFQARRAGIRYRPRGGGKPRLVHTMNGSGVAIGRTIAAILENFQ 407
Query: 192 TETG-VRIPDCLRKFV 206
+ G V IP+ LR ++
Sbjct: 408 EQDGSVVIPEVLRPYM 423
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 91/154 (59%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF+KVE LTSP D S+ L+E+ Q++E+ LG+ +R + + +G
Sbjct: 274 AGKDTRGLIRQHQFQKVELVWLTSP--DTSYDDLEELTQDAEQILEGLGLPFRRIALCTG 331
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L ++AK DLE W P G +RE+ SCSN +Q+RR +RY + K VH +N
Sbjct: 332 DLGFSSAKTYDLEVWMPAQGVYREISSCSNFEDFQARRAGIRY--RPRGGGKPRLVHTMN 389
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R I AILE Q + G V IP+ LR ++
Sbjct: 390 GSGVAIGRTIAAILENFQEQDGSVVIPEVLRPYM 423
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
D+ LI T+E P+ ++RDS L LP++Y+ +TCFR+E A
Sbjct: 230 DNLVLIPTAEVPVTNLNRDSILEAEDLPLKYVASTTCFRREAGA 273
>gi|429731727|ref|ZP_19266351.1| serine--tRNA ligase [Corynebacterium durum F0235]
gi|429144946|gb|EKX88046.1| serine--tRNA ligase [Corynebacterium durum F0235]
Length = 421
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 116/196 (59%), Gaps = 12/196 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H+ + ++ P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 219 DDLYLVGTSEVALAGYHQGEIIDLSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 278
Query: 79 VEQFVLTSPHD--DESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
VE F P D E K+LD + A + + YR++++ G L +AA+K D EA
Sbjct: 279 VEMFSWCKPEDAAAEHQKLLD----MERDMLAAIEVPYRIIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQ 191
W P +REL S SNC YQ+RRL VRY + ++ AT ATTR + AILE HQ
Sbjct: 335 WVPTQNTYRELTSTSNCTTYQARRLQVRYRDENGRPQVCATLNGTLATTRWLVAILENHQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G VR+P L+ FV
Sbjct: 395 QADGSVRVPKALQPFV 410
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 87/153 (56%), Gaps = 11/153 (7%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDD--ESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGA 360
DTRGI RVHQF+KVE F P D E K LD + A + + YR++++ G
Sbjct: 266 DTRGIIRVHQFDKVEMFSWCKPEDAAAEHQKLLD----MERDMLAAIEVPYRIIDVAGGD 321
Query: 361 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
L +AA+K D EAW P +REL S SNC YQ+RRL VRY + N + + LN
Sbjct: 322 LGSSAARKFDTEAWVPTQNTYRELTSTSNCTTYQARRLQVRY---RDENGRPQVCATLNG 378
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKFV 452
T ATTR + AILE HQ G VR+P L+ FV
Sbjct: 379 T-LATTRWLVAILENHQQADGSVRVPKALQPFV 410
>gi|384507652|ref|YP_005684321.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
gi|302207077|gb|ADL11419.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
Length = 419
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D + + +++ + A + + YRV+++ G L +AA+K D EA
Sbjct: 277 DKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLQTRYRDETGKAQTCATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVIVPEALRPFV 410
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D + + +++ + A + + YRV+++ G L
Sbjct: 266 DTRGILRVHQFDKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + K + LN T
Sbjct: 324 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLQTRY---RDETGKAQTCATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVIVPEALRPFV 410
Score = 43.9 bits (102), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREA 260
>gi|226321201|ref|ZP_03796738.1| seryl-tRNA synthetase [Borrelia burgdorferi 29805]
gi|226233398|gb|EEH32142.1| seryl-tRNA synthetase [Borrelia burgdorferi 29805]
Length = 425
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 128/220 (58%), Gaps = 13/220 (5%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E G
Sbjct: 205 IGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YR++NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRILNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G + E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYL 211
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YR++NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRILNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G + E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|224532643|ref|ZP_03673264.1| serine--tRNA ligase [Borrelia burgdorferi WI91-23]
gi|224512423|gb|EEF82803.1| serine--tRNA ligase [Borrelia burgdorferi WI91-23]
Length = 425
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 130/228 (57%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E G
Sbjct: 205 IGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YR++NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRILNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G + E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
TA ATTRVI +ILE Q + GVRIP L K+ Y IPF
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDY------IPF 423
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YR++NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRILNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G + E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|167036460|ref|YP_001664038.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167038703|ref|YP_001661688.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|300913738|ref|ZP_07131055.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307723246|ref|YP_003902997.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|320114885|ref|YP_004185044.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687557|sp|B0K0Z5.1|SYS_THEPX RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|238687674|sp|B0KAI8.1|SYS_THEP3 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166852943|gb|ABY91352.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|166855294|gb|ABY93702.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|300890423|gb|EFK85568.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307580307|gb|ADN53706.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|319927976|gb|ADV78661.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 423
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++RD+ + LPI + S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D+S++ L++M +++EE LG+ YRVV I +G L A+KK D+E W P
Sbjct: 284 ELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVVICTGDLGFTASKKYDIEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEISSCSNCEDFQARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 402 EDGSVVIPEVLRPYM 416
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE T P D+S++ L++M +++EE LG+ YRVV I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVVICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L A+KK D+E W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V IP+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|359775828|ref|ZP_09279150.1| seryl-tRNA synthetase [Arthrobacter globiformis NBRC 12137]
gi|359306844|dbj|GAB12979.1| seryl-tRNA synthetase [Arthrobacter globiformis NBRC 12137]
Length = 445
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 116/199 (58%), Gaps = 13/199 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L ++ PIR+ G S+C+R+E GSHG+DTRGI RVHQF K
Sbjct: 240 DDLYLVGTSEVPLAGYHADEILDLSAGPIRFAGQSSCYRREAGSHGKDTRGIIRVHQFNK 299
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ T+ +E+ + ++ E+ A + YRV++ +G L +AA+K D EAW
Sbjct: 300 VEMFIYTTV--EEAAAEHERLLAWEEQMLAKCELPYRVIDTAAGDLGMSAARKFDCEAWV 357
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVR----------YGQTKQKIYATACATTRVICAILE 188
P GA+REL S SNC +Q+RRL +R G ATTR I A+LE
Sbjct: 358 PTQGAYRELTSTSNCTTFQARRLNIRERVFTEDGSPKGTRAVATLNGTLATTRWIVALLE 417
Query: 189 THQTETG-VRIPDCLRKFV 206
HQ G V +P L+K++
Sbjct: 418 HHQNADGSVNVPSALQKYL 436
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE F+ T+ +E+ + ++ E+ A + YRV++ +G L
Sbjct: 287 DTRGIIRVHQFNKVEMFIYTTV--EEAAAEHERLLAWEEQMLAKCELPYRVIDTAAGDLG 344
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY------GQTKKMNEKIEFVH 416
+AA+K D EAW P GA+REL S SNC +Q+RRL +R G K V
Sbjct: 345 MSAARKFDCEAWVPTQGAYRELTSTSNCTTFQARRLNIRERVFTEDGSPKGTRA----VA 400
Query: 417 MLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
LN T ATTR I A+LE HQ G V +P L+K++ + V
Sbjct: 401 TLNGT-LATTRWIVALLEHHQNADGSVNVPSALQKYLGGLQV 441
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE P+ H D L ++ PIR+ G S+C+R+E
Sbjct: 240 DDLYLVGTSEVPLAGYHADEILDLSAGPIRFAGQSSCYRREA 281
>gi|195941420|ref|ZP_03086802.1| seryl-tRNA synthetase [Borrelia burgdorferi 80a]
gi|216264477|ref|ZP_03436469.1| seryl-tRNA synthetase [Borrelia burgdorferi 156a]
gi|223888685|ref|ZP_03623276.1| seryl-tRNA synthetase [Borrelia burgdorferi 64b]
gi|225549035|ref|ZP_03770010.1| seryl-tRNA synthetase [Borrelia burgdorferi 94a]
gi|387825880|ref|YP_005805333.1| seryl-tRNA synthetase [Borrelia burgdorferi JD1]
gi|215980950|gb|EEC21757.1| seryl-tRNA synthetase [Borrelia burgdorferi 156a]
gi|223885501|gb|EEF56600.1| seryl-tRNA synthetase [Borrelia burgdorferi 64b]
gi|225370261|gb|EEG99699.1| seryl-tRNA synthetase [Borrelia burgdorferi 94a]
gi|312148176|gb|ADQ30835.1| seryl-tRNA synthetase [Borrelia burgdorferi JD1]
Length = 425
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 130/228 (57%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPIR G S CFR+E G
Sbjct: 205 IGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YR++NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRILNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G + E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
TA ATTRVI +ILE Q + GVRIP L K+ Y IPF
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDY------IPF 423
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YR++NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESGVIHDEFLSIQEQIFTELEIPYRILNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G + E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGGYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|451945359|ref|YP_007465995.1| seryl-tRNA ligase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451904746|gb|AGF73633.1| seryl-tRNA ligase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 419
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 113/197 (57%), Gaps = 10/197 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H D + + P++Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHADEIIDLSDGPVQYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHD-DESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLE 135
+K+E FV P D E + L EM E + + + YRV+++ G L +AA+K D E
Sbjct: 277 DKLEMFVYCRPEDAQEQHRKLLEM---EREMLSAVEVPYRVIDVAGGDLGASAARKFDTE 333
Query: 136 AWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETH 190
AW P +REL S SNC +Q RRL RY K A ATTR + AILE +
Sbjct: 334 AWIPTQNTYRELTSTSNCTTFQGRRLSTRYRDANGKPQTVATLNGTLATTRWLVAILENN 393
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V +P+ LR FV
Sbjct: 394 QQADGSVVVPEALRPFV 410
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHD-DESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
DTRGI RVHQF+K+E FV P D E + L EM E + + + YRV+++ G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCRPEDAQEQHRKLLEM---EREMLSAVEVPYRVIDVAGGDL 322
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
+AA+K D EAW P +REL S SNC +Q RRL RY + N K + V LN T
Sbjct: 323 GASAARKFDTEAWIPTQNTYRELTSTSNCTTFQGRRLSTRY---RDANGKPQTVATLNGT 379
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 -LATTRWLVAILENNQQADGSVVVPEALRPFV 410
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H D + + P++Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHADEIIDLSDGPVQYAGWSSCFRREA 260
>gi|297543541|ref|YP_003675843.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841316|gb|ADH59832.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 423
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 118/195 (60%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++RD+ + LPI + S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D+S++ L++M +++EE LG+ YRVV I +G L A+KK D+E W P
Sbjct: 284 ELVKFTEP--DKSYEELEKMTKDAEEVLQLLGLPYRVVAICTGDLGFTASKKYDIEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQKIY---ATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y G Q ++ + A R AILE +Q
Sbjct: 342 SYGRYVEVSSCSNCEDFQARRANIKYRPKDGSKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 402 EDGSVVIPEVLRPYM 416
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE T P D+S++ L++M +++EE LG+ YRVV I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKFTEP--DKSYEELEKMTKDAEEVLQLLGLPYRVVAICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L A+KK D+E W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTASKKYDIEVWMPSYGRYVEVSSCSNCEDFQARRANIKY--RPKDGSKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V IP+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|125623578|ref|YP_001032061.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|385837755|ref|YP_005875385.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris A76]
gi|389853920|ref|YP_006356164.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
gi|414074735|ref|YP_006999952.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris UC509.9]
gi|166222737|sp|A2RJ76.1|SYS_LACLM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|124492386|emb|CAL97327.1| SerS protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300070342|gb|ADJ59742.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
gi|358748983|gb|AEU39962.1| Seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris A76]
gi|413974655|gb|AFW92119.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris UC509.9]
Length = 423
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LI T+E P+ +R L + LPI++ +S FR E GS GRDTRG+ R+HQF KVE
Sbjct: 228 LIPTAEVPLTNYYRGEILDGSELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 287
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
P D+S+ L++M N+E LG+AYRVV + +G + +AAK DLE W P
Sbjct: 288 KFAKP--DQSYDELEKMTANAENILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQN 345
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTETG- 195
+RE+ SCSNC D+Q+RR +RY K+ + A R + AILE +Q E G
Sbjct: 346 TYREISSCSNCEDFQARRAQIRYRDEDGKVQLLHTLNGSGLAVGRTVAAILENYQNEDGS 405
Query: 196 VRIPDCLRKFVPAV 209
+ +P+ LR ++ +
Sbjct: 406 ITVPEILRPYMGGL 419
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 6/164 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R+HQF KVE P D+S+ L++M N+E LG+AYRVV
Sbjct: 263 SEAGSAGRDTRGLIRLHQFHKVEMVKFAKP--DQSYDELEKMTANAENILQKLGLAYRVV 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + +AAK DLE W P +RE+ SCSNC +Q+RR +RY + + K++
Sbjct: 321 ALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCEDFQARRAQIRY---RDEDGKVQL 377
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
+H LN + A R + AILE +Q E G + +P+ LR ++ + V
Sbjct: 378 LHTLNGSGLAVGRTVAAILENYQNEDGSITVPEILRPYMGGLEV 421
>gi|323141849|ref|ZP_08076713.1| serine--tRNA ligase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413689|gb|EFY04544.1| serine--tRNA ligase [Phascolarctobacterium succinatutens YIT 12067]
Length = 426
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E D YLI T+E P+ HRD L LP++Y S CFR E G+ GRDTRG+ R+H
Sbjct: 219 KLENGDMYLIPTAEVPVTNYHRDDILTGDELPLKYTAYSACFRAEAGAAGRDTRGLIRMH 278
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVE T P +ESW LD++ ++EE LG+ Y VV + +G L ++A DL
Sbjct: 279 QFNKVELVKFTKP--EESWAELDKLTNDAEEVLQLLGLPYHVVRLCTGDLGFSSATTYDL 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P + +RE+ SCSN LD+Q+RR +R+ + + + + A R + AIL
Sbjct: 337 EVWLPAANCYREISSCSNFLDFQARRANIRFRRDAKSKPEFVHTLNGSGVAVGRTVAAIL 396
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q G V +P+ LR ++
Sbjct: 397 ENYQQADGSVVVPEVLRPYM 416
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
+E A DTRG+ R+HQF KVE T P +ESW LD++ ++EE LG+ Y VV
Sbjct: 262 AEAGAAGRDTRGLIRMHQFNKVELVKFTKP--EESWAELDKLTNDAEEVLQLLGLPYHVV 319
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G L ++A DLE W P + +RE+ SCSN L +Q+RR +R+ + K K EF
Sbjct: 320 RLCTGDLGFSSATTYDLEVWLPAANCYREISSCSNFLDFQARRANIRFRRDAK--SKPEF 377
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH LN + A R + AILE +Q G V +P+ LR ++
Sbjct: 378 VHTLNGSGVAVGRTVAAILENYQQADGSVVVPEVLRPYM 416
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E D YLI T+E P+ HRD L LP++Y S CFR E A
Sbjct: 219 KLENGDMYLIPTAEVPVTNYHRDDILTGDELPLKYTAYSACFRAEAGAA 267
>gi|85859585|ref|YP_461787.1| seryl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85722676|gb|ABC77619.1| seryl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 448
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 10/196 (5%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YLI T+E P+ +HR+ L E +LPI Y+ S CFR E GS+G+DTRG+ R HQF KVE
Sbjct: 249 YLIPTAEVPVTNIHREEILEEKALPIYYVAYSPCFRAEAGSYGKDTRGLIRQHQFNKVEM 308
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
TSP + S+ L+++ N+EE L I YR V++ +G L ++AK D+EAW PG
Sbjct: 309 VKFTSP--ETSYDELEKLTVNAEEVLKRLNIPYRTVSLCTGDLGFSSAKTYDVEAWLPGQ 366
Query: 142 GAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAILETHQTET 194
+RE+ SCSN D+Q+RR +R+ + + + A R + A+LE +Q
Sbjct: 367 DTYREISSCSNFEDFQARRASIRFRRESTGKLDFVHTLNGSGLAAGRTLVAVLENYQQAD 426
Query: 195 G-VRIPDCLRKFVPAV 209
G + IPD LR ++ +
Sbjct: 427 GSIVIPDVLRPYMKGM 442
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF KVE TSP + S+ L+++ N+EE L I YR V++ +G L
Sbjct: 293 DTRGLIRQHQFNKVEMVKFTSP--ETSYDELEKLTVNAEEVLKRLNIPYRTVSLCTGDLG 350
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++AK D+EAW PG +RE+ SCSN +Q+RR +R+ ++ K++FVH LN +
Sbjct: 351 FSSAKTYDVEAWLPGQDTYREISSCSNFEDFQARRASIRF--RRESTGKLDFVHTLNGSG 408
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
A R + A+LE +Q G + IPD LR ++ +
Sbjct: 409 LAAGRTLVAVLENYQQADGSIVIPDVLRPYMKGM 442
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 538 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
YLI T+E P+ +HR+ L E +LPI Y+ S CFR E +
Sbjct: 249 YLIPTAEVPVTNIHREEILEEKALPIYYVAYSPCFRAEAGS 289
>gi|300859395|ref|YP_003784378.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
gi|375289584|ref|YP_005124125.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 3/99-5]
gi|383315143|ref|YP_005375998.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis P54B96]
gi|384505560|ref|YP_005682230.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
gi|384509746|ref|YP_005686414.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
gi|384511829|ref|YP_005691407.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis PAT10]
gi|385808448|ref|YP_005844845.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 267]
gi|387137479|ref|YP_005693459.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 42/02-A]
gi|300686849|gb|ADK29771.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
gi|302331637|gb|ADL21831.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
gi|308277330|gb|ADO27229.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
gi|341825768|gb|AEK93289.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis PAT10]
gi|348607924|gb|AEP71197.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 42/02-A]
gi|371576873|gb|AEX40476.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 3/99-5]
gi|380870644|gb|AFF23118.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis P54B96]
gi|383805841|gb|AFH52920.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 267]
Length = 427
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 225 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 284
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D + + +++ + A + + YRV+++ G L +AA+K D EA
Sbjct: 285 DKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLGSSAARKFDTEA 342
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 343 WVPTQNTYRELTSTSNCTTFQARRLQTRYRDETGKAQTCATLNGTLATTRWLVAILENNQ 402
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 403 QADGSVIVPEALRPFV 418
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D + + +++ + A + + YRV+++ G L
Sbjct: 274 DTRGILRVHQFDKLEMFVFCKPED--AVEQHQALLKMERDMLAAVEVPYRVIDVAGGDLG 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + K + LN T
Sbjct: 332 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLQTRY---RDETGKAQTCATLNGT- 387
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 388 LATTRWLVAILENNQQADGSVIVPEALRPFV 418
Score = 43.9 bits (102), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + PI+Y G S+CFR+E
Sbjct: 225 ERDDLYLVGTSEVALAGYHKDEIIDLNKGPIKYAGWSSCFRREA 268
>gi|116512562|ref|YP_811469.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
gi|123025253|sp|Q02XG6.1|SYS_LACLS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|116108216|gb|ABJ73356.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
Length = 423
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LI T+E P+ +R L + LPI++ +S FR E GS GRDTRG+ R+HQF KVE
Sbjct: 228 LIPTAEVPLTNYYRGEILDGSELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 287
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
P D+S+ L++M N+E LG+AYRVV + +G + +AAK DLE W P
Sbjct: 288 KFAKP--DQSYDELEKMTANAENILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQN 345
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTETG- 195
+RE+ SCSNC D+Q+RR +RY K+ + A R + AILE +Q E G
Sbjct: 346 TYREISSCSNCEDFQARRAQIRYRDEDGKVQLLHTLNGSGLAVGRTVAAILENYQNEDGS 405
Query: 196 VRIPDCLRKFVPAV 209
+ +P+ LR ++ +
Sbjct: 406 ITVPEILRPYMGGL 419
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 6/164 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R+HQF KVE P D+S+ L++M N+E LG+AYRVV
Sbjct: 263 SEAGSAGRDTRGLIRLHQFHKVEMVKFAKP--DQSYDELEKMTANAENILQKLGLAYRVV 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + +AAK DLE W P +RE+ SCSNC +Q+RR +RY + + K++
Sbjct: 321 ALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCEDFQARRAQIRY---RDEDGKVQL 377
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
+H LN + A R + AILE +Q E G + +P+ LR ++ + V
Sbjct: 378 LHTLNGSGLAVGRTVAAILENYQNEDGSITVPEILRPYMGGLEV 421
>gi|289577292|ref|YP_003475919.1| seryl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
gi|289527005|gb|ADD01357.1| seryl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
Length = 423
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++RD+ + LPI + S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D+S++ L++M +++EE LG+ YRVV I +G L A+KK D+E W P
Sbjct: 284 ELVKFTEP--DKSYEELEKMTKDAEEVLQLLGLPYRVVAICTGDLGFTASKKYDIEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEVSSCSNCEDFQARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 402 EDGSVVIPEVLRPYM 416
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE T P D+S++ L++M +++EE LG+ YRVV I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKFTEP--DKSYEELEKMTKDAEEVLQLLGLPYRVVAICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L A+KK D+E W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTASKKYDIEVWMPSYGRYVEVSSCSNCEDFQARRANIKY--RPKDGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V IP+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYM 416
>gi|334563249|ref|ZP_08516240.1| seryl-tRNA synthetase [Corynebacterium bovis DSM 20582]
Length = 424
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 116/197 (58%), Gaps = 10/197 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H D + + P+RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 222 EEDDLYLVGTSEVALAGYHSDEIIDLSDGPVRYAGWSSCFRREAGSYGKDTRGILRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P D + +++ +E + + + YRV+++ G L +AA+K D EA
Sbjct: 282 DKLEMFVYCRPEDAAAQHR--ALLEMEKEMLSAVEVPYRVIDVAGGDLGSSAARKFDTEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY------GQTKQKIYATACATTRVICAILETH 190
W P +REL S SNC +Q+RRL RY QT + T ATTR + AILE +
Sbjct: 340 WVPTQQTYRELTSTSNCTTFQARRLKTRYRDADGRTQTAATVNGT-LATTRWLVAILENN 398
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V +P+ LR FV
Sbjct: 399 QQADGSVVVPEALRPFV 415
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P D + +++ +E + + + YRV+++ G L
Sbjct: 271 DTRGILRVHQFDKLEMFVYCRPEDAAAQHR--ALLEMEKEMLSAVEVPYRVIDVAGGDLG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + + + +N T
Sbjct: 329 SSAARKFDTEAWVPTQQTYRELTSTSNCTTFQARRLKTRY---RDADGRTQTAATVNGT- 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 385 LATTRWLVAILENNQQADGSVVVPEALRPFV 415
Score = 43.9 bits (102), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H D + + P+RY G S+CFR+E
Sbjct: 222 EEDDLYLVGTSEVALAGYHSDEIIDLSDGPVRYAGWSSCFRREA 265
>gi|386866629|ref|YP_006279623.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
gi|385700712|gb|AFI62660.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
Length = 428
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + +H + L + P+RY G S+C+R+E G+ G+DT GI RVHQF
Sbjct: 222 EPDDDYLVGTSEVALAGMHENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P + ++ +++ EE A + + YRV++ +G L +AA+K D EA
Sbjct: 282 DKVEMFVYAKPENSDAEHQ--KLLAMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDCEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILETHQ 191
W P G +REL S SNC YQ+RRL +R G + ATTR + AILE HQ
Sbjct: 340 WVPTQGRYRELTSTSNCTQYQARRLNIRERVADGGTSPVATLNGTLATTRWLVAILENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
E G + IP +R ++
Sbjct: 400 QEDGSIEIPKAMRPYM 415
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF+KVE FV P + ++ +++ EE A + + YRV++ +G
Sbjct: 268 AGKDTSGIIRVHQFDKVEMFVYAKPENSDA--EHQKLLAMEEEMLAKVEVPYRVIDTAAG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AA+K D EAW P G +REL S SNC YQ+RRL +R + + V LN
Sbjct: 326 DLGSSAARKFDCEAWVPTQGRYRELTSTSNCTQYQARRLNIR---ERVADGGTSPVATLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
T ATTR + AILE HQ E G + IP +R ++
Sbjct: 383 GT-LATTRWLVAILENHQQEDGSIEIPKAMRPYM 415
Score = 43.5 bits (101), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD YL+ TSE + +H + L + P+RY G S+C+R+E A
Sbjct: 222 EPDDDYLVGTSEVALAGMHENEILDLSDGPLRYCGWSSCYRREAGA 267
>gi|406972455|gb|EKD96216.1| hypothetical protein ACD_24C00137G0003 [uncultured bacterium]
Length = 426
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 122/191 (63%), Gaps = 7/191 (3%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LI T+E + + + L E LPI+ +G+S CFR+EVGS+G+DT+GIFR+HQF K+EQ
Sbjct: 226 LIGTAEVSLTSYYAGEVLREKDLPIKMMGLSPCFRREVGSYGKDTKGIFRIHQFTKLEQV 285
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
VL ++ S + ++M+ +EE +LG++Y++V + SG + KK D+E WFP
Sbjct: 286 VLLPEGEEFSREWHEKMLSYAEEILQNLGLSYQIVLMCSGDMGAGQRKKYDVETWFPAQQ 345
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTK---QKIYA---TACATTRVICAILETHQTETG- 195
A+RE S S LD+QSRRL +RY + + +Y T AT R++ ILET+Q E G
Sbjct: 346 AYRETHSDSYFLDFQSRRLNMRYKSSDGSLKYVYTLNNTVVATPRLLATILETYQQEDGS 405
Query: 196 VRIPDCLRKFV 206
V+IPD L K++
Sbjct: 406 VKIPDVLHKYL 416
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFR+HQF K+EQ VL ++ S + ++M+ +EE +LG++Y++V + SG +
Sbjct: 269 DTKGIFRIHQFTKLEQVVLLPEGEEFSREWHEKMLSYAEEILQNLGLSYQIVLMCSGDMG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
KK D+E WFP A+RE S S L +QSRRL +RY K + +++V+ LN T
Sbjct: 329 AGQRKKYDVETWFPAQQAYRETHSDSYFLDFQSRRLNMRY---KSSDGSLKYVYTLNNTV 385
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT R++ ILET+Q E G V+IPD L K++
Sbjct: 386 VATPRLLATILETYQQEDGSVKIPDVLHKYL 416
>gi|399116346|emb|CCG19151.1| seryl-tRNA synthetase [Taylorella asinigenitalis 14/45]
Length = 445
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 124/213 (58%), Gaps = 9/213 (4%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V GE + + ++ +D YLI+TSE + ++S + EA LP+R S CFR E
Sbjct: 229 VTKGGEGMDSDSEVAEQKEDLYLISTSEITLTGTVKNSIVAEADLPMRLTAHSPCFRSEA 288
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GS GRDTRGI R HQF+KVE + P ++S++ L+EM+ ++E+ L + YRVV +
Sbjct: 289 GSGGRDTRGIIRQHQFDKVEMVQIAHP--EKSYEALEEMLGHAEKILQALALPYRVVQLC 346
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYA 174
+G + ++AK DLE W P FRE+ S SNC +Q+RRL R+ + K +
Sbjct: 347 TGDMGFSSAKTYDLEVWIPSQNTFREISSVSNCEAFQARRLQARFKNSAGKNEFVHTLNG 406
Query: 175 TACATTRVICAILETHQTETG-VRIPDCLRKFV 206
+ A R + A++E +QTE G + IP+ LR F+
Sbjct: 407 SGVAVGRALVAVMENYQTEKGEIEIPEVLRAFM 439
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE DTRGI R HQF+KVE + P ++S++ L+EM+ ++E+ L + YRVV
Sbjct: 286 SEAGSGGRDTRGIIRQHQFDKVEMVQIAHP--EKSYEALEEMLGHAEKILQALALPYRVV 343
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + ++AK DLE W P FRE+ S SNC A+Q+RRL R+ + N EF
Sbjct: 344 QLCTGDMGFSSAKTYDLEVWIPSQNTFREISSVSNCEAFQARRLQARFKNSAGKN---EF 400
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH LN + A R + A++E +QTE G + IP+ LR F+
Sbjct: 401 VHTLNGSGVAVGRALVAVMENYQTEKGEIEIPEVLRAFM 439
Score = 43.1 bits (100), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 517 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
V GE + + ++ +D YLI+TSE + ++S + EA LP+R S CFR E
Sbjct: 229 VTKGGEGMDSDSEVAEQKEDLYLISTSEITLTGTVKNSIVAEADLPMRLTAHSPCFRSEA 288
Query: 577 DAG 579
+G
Sbjct: 289 GSG 291
>gi|253577336|ref|ZP_04854653.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843236|gb|EES71267.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 428
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI T+E P+ HRD L LP Y+ S+CFR E G+ GRDTRG+ R HQF K
Sbjct: 225 NDYYLIPTAEVPVTNYHRDEILNAEDLPRYYVAYSSCFRSEAGAAGRDTRGLIRQHQFNK 284
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P D S+ L++M +N+E LG+ YRV+ + +G + AAK DLE W
Sbjct: 285 VEMIKIVHP--DTSYDELEKMTENAERVLQLLGLPYRVLALCTGDMGFTAAKTYDLEVWL 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAILETHQ 191
P SG +RE+ SCSN D+Q+RR +R+ + K K + + A R + AILE +Q
Sbjct: 343 PESGVYREISSCSNVEDFQARRANIRFRPEPKAKPEFVHTLNGSGLAVGRTVAAILENYQ 402
Query: 192 TETG-VRIPDCLRKFV 206
E G V IP+ LR ++
Sbjct: 403 QEDGSVVIPEVLRPYM 418
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE + P D S+ L++M +N+E LG+ YRV+
Sbjct: 264 SEAGAAGRDTRGLIRQHQFNKVEMIKIVHP--DTSYDELEKMTENAERVLQLLGLPYRVL 321
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + AAK DLE W P SG +RE+ SCSN +Q+RR +R+ K K EF
Sbjct: 322 ALCTGDMGFTAAKTYDLEVWLPESGVYREISSCSNVEDFQARRANIRFRPEPKA--KPEF 379
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH LN + A R + AILE +Q E G V IP+ LR ++
Sbjct: 380 VHTLNGSGLAVGRTVAAILENYQQEDGSVVIPEVLRPYM 418
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
+D YLI T+E P+ HRD L LP Y+ S+CFR E A
Sbjct: 225 NDYYLIPTAEVPVTNYHRDEILNAEDLPRYYVAYSSCFRSEAGAA 269
>gi|319764030|ref|YP_004127967.1| seryl-tRNA synthetase [Alicycliphilus denitrificans BC]
gi|317118591|gb|ADV01080.1| seryl-tRNA synthetase [Alicycliphilus denitrificans BC]
Length = 438
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 4 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSH 63
KG + G+ P+ +L YLI TSE P+ + R +PE++LPIR S CFR E GS+
Sbjct: 226 KGGQEGEPVPDDAQL---YLIPTSEVPLTNLVRGEVVPESALPIRLTAHSPCFRSEAGSY 282
Query: 64 GRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGA 123
GRDTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRVV + +G
Sbjct: 283 GRDTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAEAVLQKLGLPYRVVCLCTGD 340
Query: 124 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATAC 177
+ +AK DLE W P G +RE+ S SNC +Q+RR+ R+ + + + +
Sbjct: 341 MGFGSAKTYDLEVWLPAQGTYREISSVSNCEAFQARRMQARFKNAQGRNELVHTLNGSGL 400
Query: 178 ATTRVICAILET-HQTETGVRIPDCLRKFV 206
A R + A+LE Q + + IP+ LR ++
Sbjct: 401 AVGRTLVAVLENCQQADGSIAIPEVLRPYM 430
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRVV + +G +
Sbjct: 285 DTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAEAVLQKLGLPYRVVCLCTGDMG 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK DLE W P G +RE+ S SNC A+Q+RR+ R+ + N E VH LN +
Sbjct: 343 FGSAKTYDLEVWLPAQGTYREISSVSNCEAFQARRMQARFKNAQGRN---ELVHTLNGSG 399
Query: 423 CATTRVICAILET-HQTETGVRIPDCLRKFV 452
A R + A+LE Q + + IP+ LR ++
Sbjct: 400 LAVGRTLVAVLENCQQADGSIAIPEVLRPYM 430
Score = 47.0 bits (110), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 520 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA- 578
KG + G+ P+ +L YLI TSE P+ + R +PE++LPIR S CFR E +
Sbjct: 226 KGGQEGEPVPDDAQL---YLIPTSEVPLTNLVRGEVVPESALPIRLTAHSPCFRSEAGSY 282
Query: 579 -----GMCRTY 584
GM R +
Sbjct: 283 GRDTRGMIRQH 293
>gi|39995148|ref|NP_951099.1| seryl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|409910622|ref|YP_006889087.1| seryl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|67461826|sp|Q74H55.1|SYS_GEOSL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|39981910|gb|AAR33372.1| seryl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|298504178|gb|ADI82901.1| seryl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 422
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 118/197 (59%), Gaps = 14/197 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ +HR L A LP+ Y + CFR+E GS+G+D RG+ R HQF KV
Sbjct: 223 DYFLIPTAEVPVTNIHRAEILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKV 282
Query: 80 E--QFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAW 137
E +FV H S+ L++++ N+EE LG+AYRVV + +G + +AAK D+E W
Sbjct: 283 ELVKFV----HPATSYDELEKLLSNAEEVLRQLGLAYRVVELCTGDMGFSAAKTYDIEVW 338
Query: 138 FPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETH 190
PG +RE+ SCSN D+QSRR +R+ + ++ + + A R + AILE +
Sbjct: 339 LPGQETYREISSCSNFEDFQSRRASIRFREDEKSKPEFVHTLNGSGLAVGRTLVAILENY 398
Query: 191 QTETG-VRIPDCLRKFV 206
Q E G V IPD LR ++
Sbjct: 399 QQEDGSVVIPDVLRPYM 415
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 94/153 (61%), Gaps = 9/153 (5%)
Query: 303 DTRGIFRVHQFEKVE--QFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGA 360
D RG+ R HQF KVE +FV H S+ L++++ N+EE LG+AYRVV + +G
Sbjct: 269 DVRGLIRQHQFNKVELVKFV----HPATSYDELEKLLSNAEEVLRQLGLAYRVVELCTGD 324
Query: 361 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
+ +AAK D+E W PG +RE+ SCSN +QSRR +R+ + +K K EFVH LN
Sbjct: 325 MGFSAAKTYDIEVWLPGQETYREISSCSNFEDFQSRRASIRFREDEK--SKPEFVHTLNG 382
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R + AILE +Q E G V IPD LR ++
Sbjct: 383 SGLAVGRTLVAILENYQQEDGSVVIPDVLRPYM 415
>gi|376291406|ref|YP_005163653.1| seryl-tRNA synthetase [Corynebacterium diphtheriae C7 (beta)]
gi|372104802|gb|AEX68399.1| seryl-tRNA synthetase [Corynebacterium diphtheriae C7 (beta)]
Length = 419
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQF 276
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K+E FV P +E+ ++ A + + YR++++ G L +AA+K D EA
Sbjct: 277 DKLEMFVYCKP--EEAVAQHQALLNMERGMLAAVEVPYRIIDVAGGDLGSSAARKFDTEA 334
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K + A ATTR + AILE +Q
Sbjct: 335 WVPTQNTYRELTSTSNCTTFQARRLRTRYRDESGKAHTAATLNGTLATTRWLVAILENNQ 394
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 395 QADGSVIVPEALRPFV 410
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+K+E FV P +E+ ++ A + + YR++++ G L
Sbjct: 266 DTRGILRVHQFDKLEMFVYCKP--EEAVAQHQALLNMERGMLAAVEVPYRIIDVAGGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + + K LN T
Sbjct: 324 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLRTRY---RDESGKAHTAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 380 LATTRWLVAILENNQQADGSVIVPEALRPFV 410
Score = 44.3 bits (103), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE + H+D + + PI+Y G S+CFR+E
Sbjct: 217 ERDDLYLVGTSEVALAGYHQDEIIDLSDGPIKYAGWSSCFRREA 260
>gi|297625341|ref|YP_003687104.1| seryl-tRNA synthetase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921106|emb|CBL55653.1| Seryl-tRNA synthetase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 424
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D++YL+ T+E P+ A H D L LP+RY G S +R+E GS+G+DTRGIFRVH F
Sbjct: 221 ERDNQYLVGTAEVPLAAYHSDEILDSKELPLRYAGFSPAYRREAGSYGKDTRGIFRVHWF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+K E F P D + + ++ + +EF + LGI + V+++ SG L +AA+K D
Sbjct: 281 DKFEMFTYCRPED--AVAEHERLLAHEKEFISALGIPFEVLDVASGDLGLSAARKYDCYG 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-----KIYATACATTRVICAILETHQ 191
W P +RE+ S SNC ++Q+RRL +R KQ + T CA TR+I ILE +Q
Sbjct: 339 WVPSQDKYREITSTSNCTEFQARRLNIRMRDGKQVTPLATLNGTLCAMTRMIVMILENYQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G V IP+ LR ++
Sbjct: 399 QVDGSVVIPEVLRPYL 414
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVH F+K E F P D + + ++ + +EF + LGI + V+++ SG L
Sbjct: 270 DTRGIFRVHWFDKFEMFTYCRPED--AVAEHERLLAHEKEFISALGIPFEVLDVASGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D W P +RE+ S SNC +Q+RRL +R K++ + LN T
Sbjct: 328 LSAARKYDCYGWVPSQDKYREITSTSNCTEFQARRLNIRMRDGKQVTP----LATLNGTL 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
CA TR+I ILE +Q G V IP+ LR ++
Sbjct: 384 CAMTRMIVMILENYQQVDGSVVIPEVLRPYL 414
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E D++YL+ T+E P+ A H D L LP+RY G S +R+E
Sbjct: 221 ERDNQYLVGTAEVPLAAYHSDEILDSKELPLRYAGFSPAYRREA 264
>gi|219684738|ref|ZP_03539681.1| seryl-tRNA synthetase [Borrelia garinii PBr]
gi|219672100|gb|EED29154.1| seryl-tRNA synthetase [Borrelia garinii PBr]
Length = 425
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 131/228 (57%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E G
Sbjct: 205 IGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G++ E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
TA ATTRVI +ILE Q + GVRIP L K+ Y IPF
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDY------IPF 423
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 93/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G++ E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|86740088|ref|YP_480488.1| seryl-tRNA synthetase [Frankia sp. CcI3]
gi|86566950|gb|ABD10759.1| seryl-tRNA synthetase [Frankia sp. CcI3]
Length = 420
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 112/195 (57%), Gaps = 7/195 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL T+E + +H L LPIRY G+S CFR+E+GS RD RG+ RVHQFEK
Sbjct: 220 DDLYLAGTAEVALVGLHAGEILDVGRLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEK 279
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFVL + + ES + E++ +E +DLG+ Y VV +G + + D+ WF
Sbjct: 280 VEQFVLCAADEAESARWHAELLATAERILSDLGLCYEVVECATGDMGVGKFRMNDINTWF 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQT------KQKIYATACATTRVICAILETHQT 192
P G FRE SCS D+Q+RR +RY T + TA AT R++ A+LE QT
Sbjct: 340 PSLGRFRETHSCSTLHDWQARRANLRYRDTDGTVRFAHTLNNTAVATPRLLAALLENFQT 399
Query: 193 ETG-VRIPDCLRKFV 206
G VR+P LR ++
Sbjct: 400 ADGEVRVPKVLRPYL 414
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A D RG+ RVHQFEKVEQFVL + + ES + E++ +E +DLG+ Y VV +G
Sbjct: 264 ASRDVRGLLRVHQFEKVEQFVLCAADEAESARWHAELLATAERILSDLGLCYEVVECATG 323
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+ + D+ WFP G FRE SCS +Q+RR +RY T + + F H LN
Sbjct: 324 DMGVGKFRMNDINTWFPSLGRFRETHSCSTLHDWQARRANLRYRDT---DGTVRFAHTLN 380
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
TA AT R++ A+LE QT G VR+P LR ++
Sbjct: 381 NTAVATPRLLAALLENFQTADGEVRVPKVLRPYL 414
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQRE- 593
DD YL T+E + +H L LPIRY G+S CFR+E + A R+
Sbjct: 220 DDLYLAGTAEVALVGLHAGEILDVGRLPIRYAGISPCFRRE-----------IGSASRDV 268
Query: 594 -GLLSEATSEEVDQ----ADPFYAHCRLHADKLEDFSKFSKILVCCVCLGERSDDVNEIV 648
GLL E+V+Q A R HA+ L + L C E+V
Sbjct: 269 RGLLRVHQFEKVEQFVLCAADEAESARWHAELLATAERILSDLGLCY----------EVV 318
Query: 649 ECDSCGVTVHEVKIQ 663
EC + + V + ++
Sbjct: 319 ECATGDMGVGKFRMN 333
>gi|189219734|ref|YP_001940375.1| Seryl-tRNA synthetase [Methylacidiphilum infernorum V4]
gi|238692085|sp|B3DX68.1|SYS_METI4 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|189186592|gb|ACD83777.1| Seryl-tRNA synthetase [Methylacidiphilum infernorum V4]
Length = 421
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 9/200 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D+ YLI T E P+ HRD L E+SLP+RY+ + CFR+E GS G+DTRG+ R+HQF+K
Sbjct: 224 DNLYLIPTGEVPLTNFHRDEILAESSLPLRYVAYTPCFRREAGSAGKDTRGLLRLHQFDK 283
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P + S+ L+EM+ ++E L + YRVV + S + AAK DLE W
Sbjct: 284 VELVQITKPEN--SYTALEEMVSHAENILRSLNLCYRVVLLASQDMGFGAAKCYDLEVWS 341
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG ++ E+ S SN ++QSRR+ +RY + K + + A R++ AILE +Q
Sbjct: 342 PGIQSWLEVSSVSNMENFQSRRMNLRYKSSSGKNILCHTLNGSGTALPRLVAAILENYQK 401
Query: 193 ETG-VRIPDCLRKFVPAVYL 211
E G V IP+ +R + YL
Sbjct: 402 EDGRVLIPEKIRTYFKEEYL 421
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R+HQF+KVE +T P + S+ L+EM+ ++E L + YRVV + S
Sbjct: 268 AGKDTRGLLRLHQFDKVELVQITKPEN--SYTALEEMVSHAENILRSLNLCYRVVLLASQ 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+ AAK DLE W PG ++ E+ S SN +QSRR+ +RY K + K H LN
Sbjct: 326 DMGFGAAKCYDLEVWSPGIQSWLEVSSVSNMENFQSRRMNLRY---KSSSGKNILCHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
+ A R++ AILE +Q E G V IP+ +R + Y+
Sbjct: 383 GSGTALPRLVAAILENYQKEDGRVLIPEKIRTYFKEEYL 421
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
D+ YLI T E P+ HRD L E+SLP+RY+ + CFR+E +
Sbjct: 224 DNLYLIPTGEVPLTNFHRDEILAESSLPLRYVAYTPCFRREAGSA 268
>gi|78485113|ref|YP_391038.1| seryl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|123755256|sp|Q31HK9.1|SYS_THICR RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|78363399|gb|ABB41364.1| seryl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 428
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 123/208 (59%), Gaps = 10/208 (4%)
Query: 10 DSAPEKDELD-DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTR 68
D E D D D YLI T+E P+ + RD + E +LP+++ + CFR E GS+GRDT+
Sbjct: 220 DKHEEHDTSDRDLYLIPTAEVPVTNLFRDEIIDEDTLPLKFTAHTPCFRSEAGSYGRDTK 279
Query: 69 GIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAA 128
G+ R HQFEKVE + P D+S++ L+ + Q +E L + YRV+++ +G + +A
Sbjct: 280 GLIRQHQFEKVEMVQIVHP--DQSYEALESLTQQAESILQKLELPYRVMSLCTGDIGFSA 337
Query: 129 AKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY--GQTKQKIYAT----ACATTRV 182
AK DLE W PG A+RE+ SCSN D+Q+RRL R+ GQ K ++ T A R
Sbjct: 338 AKTYDLEVWLPGQQAYREISSCSNFEDFQARRLKARFRKGQDKPQLAHTLNGSGLAVGRT 397
Query: 183 ICAILETHQTETG-VRIPDCLRKFVPAV 209
+ A+LE +Q G + +P LR ++ V
Sbjct: 398 LVAVLENYQNADGSITVPTALRSYLGGV 425
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G+ R HQFEKVE + P D+S++ L+ + Q +E L + YRV+++ +G +
Sbjct: 277 DTKGLIRQHQFEKVEMVQIVHP--DQSYEALESLTQQAESILQKLELPYRVMSLCTGDIG 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK DLE W PG A+RE+ SCSN +Q+RRL R+ +K +K + H LN +
Sbjct: 335 FSAAKTYDLEVWLPGQQAYREISSCSNFEDFQARRLKARF---RKGQDKPQLAHTLNGSG 391
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
A R + A+LE +Q G + +P LR ++ V +
Sbjct: 392 LAVGRTLVAVLENYQNADGSITVPTALRSYLGGVEI 427
>gi|284028198|ref|YP_003378129.1| seryl-tRNA synthetase [Kribbella flavida DSM 17836]
gi|283807491|gb|ADB29330.1| seryl-tRNA synthetase [Kribbella flavida DSM 17836]
Length = 424
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 115/191 (60%), Gaps = 8/191 (4%)
Query: 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 81
YL+ TSE + H D L + P+RY G S+C+R+E GS+G+DTRGI RVHQF+KVE
Sbjct: 225 YLVGTSEVSLAGYHMDEILDLSGGPVRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEM 284
Query: 82 FVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGS 141
F S D E+ ++ +E + +AYRV++ +G L +A +K D EAW P
Sbjct: 285 FSYCSLEDAEAEHQ--RLLGWEKEMLDKMELAYRVIDTATGDLGASAYRKFDCEAWVPTQ 342
Query: 142 GAFRELVSCSNCLDYQSRRLLVRY----GQTKQ-KIYATACATTRVICAILETHQTETG- 195
GA+REL S SN DYQ+RRL +R+ G+T+ ATTR I AILETHQ G
Sbjct: 343 GAYRELTSTSNTTDYQARRLNIRHRDAEGRTRHVATLNGTLATTRWIVAILETHQLPDGS 402
Query: 196 VRIPDCLRKFV 206
VR+P LR +V
Sbjct: 403 VRVPAALRPYV 413
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F S D E+ ++ +E + +AYRV++ +G L
Sbjct: 269 DTRGIIRVHQFDKVEMFSYCSLEDAEAEH--QRLLGWEKEMLDKMELAYRVIDTATGDLG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P GA+REL S SN YQ+RRL +R+ + + V LN T
Sbjct: 327 ASAYRKFDCEAWVPTQGAYRELTSTSNTTDYQARRLNIRH---RDAEGRTRHVATLNGT- 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILETHQ G VR+P LR +V
Sbjct: 383 LATTRWIVAILETHQLPDGSVRVPAALRPYV 413
>gi|347521088|ref|YP_004778659.1| seryl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
gi|385832469|ref|YP_005870244.1| seryl-tRNA synthetase [Lactococcus garvieae Lg2]
gi|343179656|dbj|BAK57995.1| seryl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
gi|343181622|dbj|BAK59960.1| seryl-tRNA synthetase [Lactococcus garvieae Lg2]
Length = 423
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LI T+E P+ +R L A LP+ + +S FR E GS GRDTRG+ R+HQF KVE
Sbjct: 228 LIPTAEVPLTNYYRGEILDNAELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 287
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
P +ES+ L++M+ N+E LG+AYRV+ + +G + +AAK DLE W P
Sbjct: 288 KFARP--EESYDELEKMVVNAENILQKLGLAYRVIALSTGDMGFSAAKTYDLEVWIPAQN 345
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTKQKI------YATACATTRVICAILETHQTETG- 195
+RE+ SCSNC D+Q+RR +RY K+ + A R + AILE +Q E G
Sbjct: 346 TYREISSCSNCEDFQARRAQIRYRDEDGKVNLLHTLNGSGLAVGRTVAAILENYQNEDGS 405
Query: 196 VRIPDCLRKFVPAV 209
V +P+ LR ++ +
Sbjct: 406 VTVPEVLRPYMGGL 419
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 6/164 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R+HQF KVE P +ES+ L++M+ N+E LG+AYRV+
Sbjct: 263 SEAGSAGRDTRGLIRLHQFHKVEMVKFARP--EESYDELEKMVVNAENILQKLGLAYRVI 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + +AAK DLE W P +RE+ SCSNC +Q+RR +RY + + K+
Sbjct: 321 ALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCEDFQARRAQIRY---RDEDGKVNL 377
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
+H LN + A R + AILE +Q E G V +P+ LR ++ + V
Sbjct: 378 LHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEVLRPYMGGLEV 421
>gi|348590487|ref|YP_004874949.1| seryl-tRNA synthetase [Taylorella asinigenitalis MCE3]
gi|347974391|gb|AEP36926.1| Seryl-tRNA synthetase [Taylorella asinigenitalis MCE3]
Length = 445
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 124/213 (58%), Gaps = 9/213 (4%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
V GE + + ++ +D YLI+TSE + ++S + EA LP+R S CFR E
Sbjct: 229 VTKGGEGMDSDSEVAEQKEDLYLISTSEITLTGTVKNSIVAEADLPMRLTAHSPCFRSEA 288
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GS GRDTRGI R HQF+KVE + P ++S++ L+EM+ ++E+ L + YRVV +
Sbjct: 289 GSGGRDTRGIIRQHQFDKVEMVQIAHP--EKSYEALEEMLGHAEKILQALALPYRVVQLC 346
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYA 174
+G + ++AK DLE W P FRE+ S SNC +Q+RRL R+ + K +
Sbjct: 347 TGDMGFSSAKTYDLEVWIPSQNTFREISSVSNCEAFQARRLQARFKNSAGKNEFVHTLNG 406
Query: 175 TACATTRVICAILETHQTETG-VRIPDCLRKFV 206
+ A R + A++E +QTE G + IP+ LR F+
Sbjct: 407 SGVAVGRALVAVMENYQTEKGEIEIPEVLRAFM 439
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE DTRGI R HQF+KVE + P ++S++ L+EM+ ++E+ L + YRVV
Sbjct: 286 SEAGSGGRDTRGIIRQHQFDKVEMVQIAHP--EKSYEALEEMLGHAEKILQALALPYRVV 343
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + ++AK DLE W P FRE+ S SNC A+Q+RRL R+ + N EF
Sbjct: 344 QLCTGDMGFSSAKTYDLEVWIPSQNTFREISSVSNCEAFQARRLQARFKNSAGKN---EF 400
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH LN + A R + A++E +QTE G + IP+ LR F+
Sbjct: 401 VHTLNGSGVAVGRALVAVMENYQTEKGEIEIPEVLRAFM 439
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 517 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
V GE + + ++ +D YLI+TSE + ++S + EA LP+R S CFR E
Sbjct: 229 VTKGGEGMDSDSEVAEQKEDLYLISTSEITLTGTVKNSIVAEADLPMRLTAHSPCFRSEA 288
Query: 577 DAG 579
+G
Sbjct: 289 GSG 291
>gi|187251906|ref|YP_001876388.1| seryl-tRNA synthetase [Elusimicrobium minutum Pei191]
gi|238065101|sp|B2KEV5.1|SYS_ELUMP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|186972066|gb|ACC99051.1| Seryl-tRNA synthetase [Elusimicrobium minutum Pei191]
Length = 424
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 120/192 (62%), Gaps = 9/192 (4%)
Query: 21 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVE 80
++LI+T+E P+ ++R L EA LP++ + CFR+E G++G+DTRG+ R HQF+KVE
Sbjct: 228 QFLISTAEIPLTNMNRGKVLQEAELPVKLTAGTPCFRKEAGTYGKDTRGLIRNHQFDKVE 287
Query: 81 QFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPG 140
++++ +D S+ +L+ M ++E+ LG+AYR V + +G + ++AK D+E W P
Sbjct: 288 LVMISNSND--SFNLLEAMTADAEDVLKGLGLAYRTVELCTGDMGFSSAKTYDIEVWMPS 345
Query: 141 SGAFRELVSCSNCLDYQSRRLLVRYGQTKQKI------YATACATTRVICAILETHQTET 194
+RE+ SCSNC +Q+RR+ +RY + KI + A R + AILE +Q E
Sbjct: 346 ENKYREISSCSNCTSFQARRMNLRYKNAEGKIEFVHTLNGSGVAVGRALAAILENYQQED 405
Query: 195 G-VRIPDCLRKF 205
G V +P+ LR +
Sbjct: 406 GSVIVPEALRPY 417
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 6/150 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+KVE ++++ +D S+ L+ M ++E+ LG+AYR V + +G +
Sbjct: 273 DTRGLIRNHQFDKVELVMISNSND--SFNLLEAMTADAEDVLKGLGLAYRTVELCTGDMG 330
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++AK D+E W P +RE+ SCSNC ++Q+RR+ +RY K KIEFVH LN +
Sbjct: 331 FSSAKTYDIEVWMPSENKYREISSCSNCTSFQARRMNLRY---KNAEGKIEFVHTLNGSG 387
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKF 451
A R + AILE +Q E G V +P+ LR +
Sbjct: 388 VAVGRALAAILENYQQEDGSVIVPEALRPY 417
>gi|226309605|ref|YP_002769499.1| seryl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|254783010|sp|C0ZH54.1|SYS_BREBN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226092553|dbj|BAH40995.1| seryl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 426
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 119/203 (58%), Gaps = 10/203 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E D +LI T+E P+ +HRD + A LP Y S CFR E GS GRDTRG+ R H
Sbjct: 220 KIEGPDYFLIPTAEVPVTNMHRDEIMDGADLPRYYTAFSACFRSEAGSAGRDTRGLIRQH 279
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVE P +ES+ LD++++N+E+ LG+ YRV+++ +G L AAKK D+
Sbjct: 280 QFNKVELVKFVKP--EESYDELDKLVKNAEKVLQLLGLPYRVLSMCTGDLGFTAAKKFDI 337
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQ-TKQK------IYATACATTRVICAIL 187
E W P +RE+ SCSN D+Q+RR +R+ + TK K + + A R + AIL
Sbjct: 338 EVWIPSGDTYREISSCSNFEDFQARRANIRFRRDTKSKPEFVHTLNGSGLAIGRTVAAIL 397
Query: 188 ETHQTETG-VRIPDCLRKFVPAV 209
E +Q G + IP+ LR ++ V
Sbjct: 398 ENYQEADGAIVIPEVLRPYMGGV 420
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE P +ES+ LD++++N+E+ LG+ YRV+
Sbjct: 263 SEAGSAGRDTRGLIRQHQFNKVELVKFVKP--EESYDELDKLVKNAEKVLQLLGLPYRVL 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
++ +G L AAKK D+E W P +RE+ SCSN +Q+RR +R+ + K K EF
Sbjct: 321 SMCTGDLGFTAAKKFDIEVWIPSGDTYREISSCSNFEDFQARRANIRFRRDTK--SKPEF 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
VH LN + A R + AILE +Q G + IP+ LR ++ V
Sbjct: 379 VHTLNGSGLAIGRTVAAILENYQEADGAIVIPEVLRPYMGGV 420
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E D +LI T+E P+ +HRD + A LP Y S CFR E +
Sbjct: 220 KIEGPDYFLIPTAEVPVTNMHRDEIMDGADLPRYYTAFSACFRSEAGSA 268
>gi|424819666|ref|ZP_18244739.1| Seryl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
gi|290559202|gb|EFD92555.1| seryl-tRNA synthetase [Candidatus Parvarchaeum acidophilus ARMAN-5]
gi|326422542|gb|EGD71938.1| Seryl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
Length = 430
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 123/195 (63%), Gaps = 9/195 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++++LI+T+E P+ A + +S + E LPI+ +GVS+ FR+E G+HG+DT+GIFR+HQFE+
Sbjct: 233 EERFLISTTEHPLIAQYTNSTINENELPIKLVGVSSAFRKEAGAHGKDTKGIFRMHQFEQ 292
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
EQ VL P D S K +EM++N EE + +L I YRVV+ +G + K+ D+EA+
Sbjct: 293 TEQIVLCKPED--SDKFHEEMVKNVEEIWKELNIPYRVVSCSTGDMGVRDFKQYDIEAYL 350
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQ---TKQKIY---ATACATTRVICAILETHQT 192
+RE+ S N D+ SRRL ++Y K +Y T R I AI++T+Q
Sbjct: 351 YSQKKYREVGSFDNTTDWISRRLNIKYADKEGNKHYLYTLDGTGLPIQRTIIAIMDTYQQ 410
Query: 193 ETG-VRIPDCLRKFV 206
G +++PD L+KFV
Sbjct: 411 PNGTIKVPDVLKKFV 425
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFR+HQFE+ EQ VL P D + + +EM++N EE + +L I YRVV+ +G +
Sbjct: 280 DTKGIFRMHQFEQTEQIVLCKPEDSDKFH--EEMVKNVEEIWKELNIPYRVVSCSTGDMG 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
K+ D+EA+ +RE+ S N + SRRL ++Y K+ N+ +++ L+ T
Sbjct: 338 VRDFKQYDIEAYLYSQKKYREVGSFDNTTDWISRRLNIKYAD-KEGNK--HYLYTLDGTG 394
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
R I AI++T+Q G +++PD L+KFV
Sbjct: 395 LPIQRTIIAIMDTYQQPNGTIKVPDVLKKFV 425
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++++LI+T+E P+ A + +S + E LPI+ +GVS+ FR+E A
Sbjct: 233 EERFLISTTEHPLIAQYTNSTINENELPIKLVGVSSAFRKEAGA 276
>gi|333895889|ref|YP_004469763.1| seryl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111154|gb|AEF16091.1| Seryl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 423
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++R++ + LPI S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRETIIDSEKLPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E +T P ++S++ L++M+ ++E+ LGI YRVV+I +G L AAKK DLE W P
Sbjct: 284 ELVKITEP--EKSYEELEKMVSDAEDVLKTLGIPYRVVSICTGDLGFTAAKKYDLEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEISSCSNCEDFQARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
+ G V +P+ LR ++
Sbjct: 402 KDGSVVVPEALRPYM 416
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 95/154 (61%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE +T P ++S++ L++M+ ++E+ LGI YRVV+I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKITEP--EKSYEELEKMVSDAEDVLKTLGIPYRVVSICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q + G V +P+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQKDGSVVVPEALRPYM 416
>gi|386853634|ref|YP_006202919.1| SerS protein [Borrelia garinii BgVir]
gi|365193668|gb|AEW68566.1| SerS [Borrelia garinii BgVir]
Length = 425
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 130/228 (57%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E G
Sbjct: 205 IGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G++ E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
T ATTRVI +ILE Q E GVRIP L K+ Y IPF
Sbjct: 382 NGTVIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDY------IPF 423
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G++ E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
T ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 384 TVIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
>gi|224534318|ref|ZP_03674896.1| serine--tRNA ligase [Borrelia spielmanii A14S]
gi|224514420|gb|EEF84736.1| serine--tRNA ligase [Borrelia spielmanii A14S]
Length = 425
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 129/228 (56%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + S PI+ G S CFR+E G
Sbjct: 205 IGFNPRGDESNIYKIEDTDKYLVGTSEITLGGYYYNKIIDLTS-PIKMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESSVIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G GA+ E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGAYGEITSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
TA ATTRVI +ILE Q E GVRIP L K+ Y IPF
Sbjct: 382 NGTAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDY------IPF 423
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 93/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESSVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G GA+ E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGAYGEITSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q E GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDEKGGVRIPKSLVKYTGFDYI 421
>gi|420144631|ref|ZP_14652119.1| Serine--tRNA ligase [Lactococcus garvieae IPLA 31405]
gi|391856083|gb|EIT66632.1| Serine--tRNA ligase [Lactococcus garvieae IPLA 31405]
Length = 423
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LI T+E P+ +R L A LP+ + +S FR E GS GRDTRG+ R+HQF KVE
Sbjct: 228 LIPTAEVPLTNYYRGEILDNAELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMV 287
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
P +ES+ L++M+ N+E LG+AYRV+ + +G + +AAK DLE W P
Sbjct: 288 KFARP--EESYDELEKMVVNAENILQKLGLAYRVIALSTGDMGFSAAKTYDLEVWIPAQN 345
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTKQKI------YATACATTRVICAILETHQTETG- 195
+RE+ SCSNC D+Q+RR +RY K+ + A R + AILE +Q E G
Sbjct: 346 TYREISSCSNCEDFQARRAQIRYRDEDGKVNLLHTLNGSGLAVGRTVAAILENYQNEDGS 405
Query: 196 VRIPDCLRKFVPAV 209
V +P+ LR ++ +
Sbjct: 406 VTVPEVLRPYMGGL 419
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 6/164 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R+HQF KVE P +ES+ L++M+ N+E LG+AYRV+
Sbjct: 263 SEAGSAGRDTRGLIRLHQFHKVEMVKFARP--EESYDELEKMVVNAENILQKLGLAYRVI 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + +AAK DLE W P +RE+ SCSNC +Q+RR +RY + + K+
Sbjct: 321 ALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCEDFQARRAQIRY---RDEDGKVNL 377
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
+H LN + A R + AILE +Q E G V +P+ LR ++ + V
Sbjct: 378 LHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEVLRPYMGGLEV 421
>gi|220911065|ref|YP_002486374.1| seryl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
gi|254783002|sp|B8H9Q1.1|SYS_ARTCA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|219857943|gb|ACL38285.1| seryl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
Length = 426
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 115/199 (57%), Gaps = 13/199 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H D L ++ PIRY G S+C+R+E GSHG+DTRGI RVHQF K
Sbjct: 221 DDLYLVGTSEVALAGYHADEILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNK 280
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ T+ +E+ ++ EE A + YRV++ +G L ++AA+K D EAW
Sbjct: 281 VEMFIYTTV--EEAAAEHQRLLAWEEEMLAKCELPYRVIDTAAGDLGNSAARKYDCEAWV 338
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVR----------YGQTKQKIYATACATTRVICAILE 188
P GA+REL S SNC +Q+RRL +R G ATTR I A+LE
Sbjct: 339 PTQGAYRELTSTSNCTTFQARRLNIRERAVNAEGVAKGTRAVATLNGTLATTRWIVALLE 398
Query: 189 THQTETG-VRIPDCLRKFV 206
HQ G V +P L+K++
Sbjct: 399 HHQNADGSVNVPKALQKYL 417
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 92/158 (58%), Gaps = 6/158 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE F+ T+ +E+ ++ EE A + YRV++ +G L
Sbjct: 268 DTRGIIRVHQFNKVEMFIYTTV--EEAAAEHQRLLAWEEEMLAKCELPYRVIDTAAGDLG 325
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYG--QTKKMNEKIEFVHMLNA 420
++AA+K D EAW P GA+REL S SNC +Q+RRL +R + + + V LN
Sbjct: 326 NSAARKYDCEAWVPTQGAYRELTSTSNCTTFQARRLNIRERAVNAEGVAKGTRAVATLNG 385
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
T ATTR I A+LE HQ G V +P L+K++ + V
Sbjct: 386 T-LATTRWIVALLEHHQNADGSVNVPKALQKYLGGLEV 422
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H D L ++ PIRY G S+C+R+E
Sbjct: 221 DDLYLVGTSEVALAGYHADEILDFSAGPIRYAGQSSCYRREA 262
>gi|357589998|ref|ZP_09128664.1| seryl-tRNA synthetase [Corynebacterium nuruki S6-4]
Length = 425
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
+ DD +L+ TSE + H D + + P++Y G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 221 DTDDLFLVGTSEVALAGYHADEIIDLSDGPVKYAGWSSCFRREAGSYGKDTRGILRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P +E+ + +++ ++ A + + YRV+++ G L +AA+K D EA
Sbjct: 281 DKVEMFVYARP--EEAEDIHQQLLAMEKDMLAAVEVPYRVIDVAGGDLGSSAARKFDTEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL RY K A ATTR + AILE +Q
Sbjct: 339 WVPTQNTYRELTSTSNCTTFQARRLKTRYRDDNGKAQTCATLNGTLATTRWLVAILENNQ 398
Query: 192 TETG-VRIPDCLRKFV 206
G V +P+ LR FV
Sbjct: 399 QADGSVVVPEALRPFV 414
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P +E+ +++ ++ A + + YRV+++ G L
Sbjct: 270 DTRGILRVHQFDKVEMFVYARP--EEAEDIHQQLLAMEKDMLAAVEVPYRVIDVAGGDLG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P +REL S SNC +Q+RRL RY + N K + LN T
Sbjct: 328 SSAARKFDTEAWVPTQNTYRELTSTSNCTTFQARRLKTRY---RDDNGKAQTCATLNGT- 383
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR + AILE +Q G V +P+ LR FV
Sbjct: 384 LATTRWLVAILENNQQADGSVVVPEALRPFV 414
>gi|110003912|emb|CAK98252.1| seryl-trna synthetase protein [Spiroplasma citri]
Length = 422
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 120/195 (61%), Gaps = 8/195 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+ YLI TSE P+ ++R+ L + LPI + + CFRQE GS GRDT+GI R+HQF
Sbjct: 222 EKDNLYLIPTSEVPVTNLYREEILEKDQLPIYHTAYTPCFRQESGSAGRDTKGIIRLHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE T+ ++ S++ L++M+ ++E L I YRV+ + SG + ++ K D+E
Sbjct: 282 KKVEMVKFTT--EEASFEELEKMVLDAENILQLLEIPYRVILLCSGDMGFSSTKTYDVEV 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-----ATACATTRVICAILETHQ 191
W PG +RE+ SCSNCLD+Q+RR+ +RY + Y + A R+I AILE +Q
Sbjct: 340 WMPGQNKYREISSCSNCLDFQARRMKLRYRDDNEIKYVHTLNGSGLAIDRLIAAILENYQ 399
Query: 192 TETG-VRIPDCLRKF 205
E G + IP L+ +
Sbjct: 400 NEDGTITIPKKLQPY 414
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 97/153 (63%), Gaps = 7/153 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GI R+HQF+KVE T+ ++ S++ L++M+ ++E L I YRV+ + SG
Sbjct: 268 AGRDTKGIIRLHQFKKVEMVKFTT--EEASFEELEKMVLDAENILQLLEIPYRVILLCSG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+ ++ K D+E W PG +RE+ SCSNCL +Q+RR+ +RY + + +I++VH LN
Sbjct: 326 DMGFSSTKTYDVEVWMPGQNKYREISSCSNCLDFQARRMKLRY----RDDNEIKYVHTLN 381
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+ A R+I AILE +Q E G + IP L+ +
Sbjct: 382 GSGLAIDRLIAAILENYQNEDGTITIPKKLQPY 414
Score = 43.1 bits (100), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTYFH 586
E D+ YLI TSE P+ ++R+ L + LPI + + CFRQE + G+ R +
Sbjct: 222 EKDNLYLIPTSEVPVTNLYREEILEKDQLPIYHTAYTPCFRQESGSAGRDTKGIIRLHQF 281
Query: 587 VTCAQREGLLSEATSEEVDQ 606
+ EA+ EE+++
Sbjct: 282 KKVEMVKFTTEEASFEELEK 301
>gi|187479159|ref|YP_787184.1| seryl-tRNA synthetase [Bordetella avium 197N]
gi|123514094|sp|Q2KWF5.1|SYS_BORA1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|115423746|emb|CAJ50296.1| seryl-tRNA synthetase [Bordetella avium 197N]
Length = 449
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 16/215 (7%)
Query: 9 GDSAPEKDE------LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGS 62
GD P+ DE +D+YLI+TSE + +V RD+ +P LP+R + CFR E GS
Sbjct: 232 GDDDPKVDEQGKPLAREDQYLISTSEITLTSVVRDTIVPGDVLPLRMTAHTPCFRSEAGS 291
Query: 63 HGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSG 122
GRDTRG+ R HQF+KVE + +P ++S+ L++M+ ++EE LG+ YRV+ + +G
Sbjct: 292 GGRDTRGMIRQHQFDKVEMVQVANP--EQSYDALEQMVGHAEEVLRRLGLPYRVMLLCTG 349
Query: 123 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYAT 175
+ AAK DLE W P +RE+ S SNC +Q+RR+ R+ K K + +
Sbjct: 350 DMGFGAAKTYDLEVWLPAQNTWREISSVSNCESFQARRMQARFRADAKSKPEFVHTLNGS 409
Query: 176 ACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 209
A R + A+LE +Q E G VRIP+ LR ++ +
Sbjct: 410 GLAVGRALVAVLENYQQEDGSVRIPEALRPYMGGI 444
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE DTRG+ R HQF+KVE + +P ++S+ L++M+ ++EE LG+ YRV+
Sbjct: 287 SEAGSGGRDTRGMIRQHQFDKVEMVQVANP--EQSYDALEQMVGHAEEVLRRLGLPYRVM 344
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
+ +G + AAK DLE W P +RE+ S SNC ++Q+RR+ R+ K K EF
Sbjct: 345 LLCTGDMGFGAAKTYDLEVWLPAQNTWREISSVSNCESFQARRMQARFRADAK--SKPEF 402
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
VH LN + A R + A+LE +Q E G VRIP+ LR ++ +
Sbjct: 403 VHTLNGSGLAVGRALVAVLENYQQEDGSVRIPEALRPYMGGI 444
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 525 GDSAPEKDE------LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
GD P+ DE +D+YLI+TSE + +V RD+ +P LP+R + CFR E +
Sbjct: 232 GDDDPKVDEQGKPLAREDQYLISTSEITLTSVVRDTIVPGDVLPLRMTAHTPCFRSEAGS 291
Query: 579 G 579
G
Sbjct: 292 G 292
>gi|410666400|ref|YP_006918771.1| seryl-tRNA synthetase SerS [Thermacetogenium phaeum DSM 12270]
gi|409104147|gb|AFV10272.1| seryl-tRNA synthetase SerS [Thermacetogenium phaeum DSM 12270]
Length = 425
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 120/196 (61%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D +LI T+E P+ ++ D LP LPI + + CFR E G+ GRDTRG+ R HQF K
Sbjct: 223 EDLFLIPTAEVPVTNLYSDEILPGEVLPIYHTAYTACFRAEAGAAGRDTRGLIRQHQFNK 282
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE T+P D S+ L+++ ++E+ LG+AYRVV++ +G L +AAK DLE WF
Sbjct: 283 VELVKFTTPED--SYLELEKLTADAEDVLRRLGLAYRVVSLSTGDLGFSAAKTYDLEVWF 340
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQKIY---ATACATTRVICAILETHQ 191
P +G +RE+ SCSN D+Q+RR +RY G + ++ + A R + AILE +Q
Sbjct: 341 PAAGTYREISSCSNFEDFQARRANIRYRPEAGARPRFVHTLNGSGVAVGRTVAAILENYQ 400
Query: 192 TETG-VRIPDCLRKFV 206
E G V +P+ LR ++
Sbjct: 401 REDGSVVVPEVLRPYM 416
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 95/154 (61%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE T+P D S+ L+++ ++E+ LG+AYRVV++ +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKFTTPED--SYLELEKLTADAEDVLRRLGLAYRVVSLSTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK DLE WFP +G +RE+ SCSN +Q+RR +RY + + FVH LN
Sbjct: 325 DLGFSAAKTYDLEVWFPAAGTYREISSCSNFEDFQARRANIRY--RPEAGARPRFVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R + AILE +Q E G V +P+ LR ++
Sbjct: 383 GSGVAVGRTVAAILENYQREDGSVVVPEVLRPYM 416
>gi|419619921|ref|ZP_14153379.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 51494]
gi|380602212|gb|EIB22505.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 51494]
Length = 411
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 118/194 (60%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSIAKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNKQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE + P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSIAKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNKQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|319790114|ref|YP_004151747.1| seryl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114616|gb|ADU97106.1| seryl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 427
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 123/199 (61%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D +LI T+E P+ +H + LPE +LPI Y + CFR+E G+HGRD RGI R+H
Sbjct: 223 KIEGEDLWLIPTAEVPLTNLHANEILPEKALPIYYTAYTPCFRKEAGAHGRDVRGIMRLH 282
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVE + P + S+ L+++++ +E+ LG+ YRVV + +G L +AAK D+
Sbjct: 283 QFNKVELVKIVHP--ETSYDELEKLVKEAEKVLQLLGLHYRVVELCTGDLGFSAAKTYDI 340
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKIYATACATTRVICAILE 188
E W P +RE+ SCSNC D+Q+RR +R+ G+T+ + + A R + AILE
Sbjct: 341 EVWIPSQERYREISSCSNCEDFQARRAKIRFRDKEGKTQLVHTLNGSGLAVGRTVIAILE 400
Query: 189 THQTETG-VRIPDCLRKFV 206
Q + G V++P+ L+ ++
Sbjct: 401 QFQQKDGSVKVPEVLQDYL 419
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 6/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI R+HQF KVE + P + S+ L+++++ +E+ LG+ YRVV + +G L
Sbjct: 274 DVRGIMRLHQFNKVELVKIVHP--ETSYDELEKLVKEAEKVLQLLGLHYRVVELCTGDLG 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK D+E W P +RE+ SCSNC +Q+RR +R+ + K + VH LN +
Sbjct: 332 FSAAKTYDIEVWIPSQERYREISSCSNCEDFQARRAKIRF---RDKEGKTQLVHTLNGSG 388
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + AILE Q + G V++P+ L+ ++
Sbjct: 389 LAVGRTVIAILEQFQQKDGSVKVPEVLQDYL 419
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D +LI T+E P+ +H + LPE +LPI Y + CFR+E A
Sbjct: 223 KIEGEDLWLIPTAEVPLTNLHANEILPEKALPIYYTAYTPCFRKEAGA 270
>gi|168700966|ref|ZP_02733243.1| seryl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
Length = 431
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 117/195 (60%), Gaps = 13/195 (6%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LIAT+E + +HRD EA LP RY+G+S CFR E G+ GRDTRG++RVHQF KVE F
Sbjct: 229 LIATAEITLGGMHRDRIFDEAELPKRYVGLSHCFRTEAGAAGRDTRGLYRVHQFTKVEMF 288
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPG-- 140
+P ++ + +E+ E+ + LG+ + V++ +G L A +K DLEAW PG
Sbjct: 289 AFCTPETSDA--IHEEIRALEEKIFQGLGLCFHVIDTATGDLGGPAYRKYDLEAWMPGRG 346
Query: 141 -SGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQT 192
GA+ E+ S SNC D+Q+RRL +RY K + TA A TR + AILE +Q
Sbjct: 347 TGGAYGEITSTSNCTDFQARRLGIRYKGKGFKGTKFAHTLNGTAVACTRALVAILENYQQ 406
Query: 193 ETG-VRIPDCLRKFV 206
G V IP+ LR +V
Sbjct: 407 ADGSVVIPEVLRPWV 421
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 95/163 (58%), Gaps = 10/163 (6%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEE-FYADLGIAYRV 353
+E A DTRG++RVHQF KVE F +P E+ + E I+ EE + LG+ + V
Sbjct: 264 TEAGAAGRDTRGLYRVHQFTKVEMFAFCTP---ETSDAIHEEIRALEEKIFQGLGLCFHV 320
Query: 354 VNIVSGALNHAAAKKLDLEAWFPG---SGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE 410
++ +G L A +K DLEAW PG GA+ E+ S SNC +Q+RRL +RY K +
Sbjct: 321 IDTATGDLGGPAYRKYDLEAWMPGRGTGGAYGEITSTSNCTDFQARRLGIRY--KGKGFK 378
Query: 411 KIEFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+F H LN TA A TR + AILE +Q G V IP+ LR +V
Sbjct: 379 GTKFAHTLNGTAVACTRALVAILENYQQADGSVVIPEVLRPWV 421
Score = 46.2 bits (108), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 539 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
LIAT+E + +HRD EA LP RY+G+S CFR E A
Sbjct: 229 LIATAEITLGGMHRDRIFDEAELPKRYVGLSHCFRTEAGA 268
>gi|46190424|ref|ZP_00121503.2| COG0172: Seryl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|189440622|ref|YP_001955703.1| seryl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|317482165|ref|ZP_07941188.1| seryl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
gi|238692045|sp|B3DQG7.1|SYS_BIFLD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|189429057|gb|ACD99205.1| Seryl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|316916399|gb|EFV37798.1| seryl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
Length = 428
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E G+ G+DT GI RVHQF
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV D S+K + ++ +E A + + YR+++ +G L +AA+K D EA
Sbjct: 282 DKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILETHQ 191
W P G +REL S SNC +YQ+RRL +R G ATTR + AI+E HQ
Sbjct: 340 WVPTQGRYRELTSTSNCTEYQARRLNIRERMEDGGTRPVSTLNGTLATTRWLVAIMENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
+ G + IP +R ++
Sbjct: 400 QKDGSIEIPQAMRAYM 415
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF+KVE FV D S+K + ++ +E A + + YR+++ +G
Sbjct: 268 AGKDTSGIIRVHQFDKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AA+K D EAW P G +REL S SNC YQ+RRL +R + + V LN
Sbjct: 326 DLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQARRLNIR---ERMEDGGTRPVSTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
T ATTR + AI+E HQ + G + IP +R ++ V E
Sbjct: 383 GT-LATTRWLVAIMENHQQKDGSIEIPQAMRAYMGGKEVIE 422
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E A
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGA 267
>gi|407941836|ref|YP_006857476.1| seryl-tRNA ligase [Campylobacter jejuni subsp. jejuni PT14]
gi|419649484|ref|ZP_14180722.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|380630017|gb|EIB48262.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|407905674|gb|AFU42503.1| seryl-tRNA ligase [Campylobacter jejuni subsp. jejuni PT14]
Length = 411
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 118/194 (60%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSIAKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDALKKY 410
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE + P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSIAKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDALKKY 410
>gi|111115050|ref|YP_709668.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
gi|384206724|ref|YP_005592445.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
gi|123341391|sp|Q0SNT6.1|SYS_BORAP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|110890324|gb|ABH01492.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
gi|342856607|gb|AEL69455.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
Length = 425
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 130/228 (57%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E G
Sbjct: 205 IGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESSIIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY----GQTK--QKI 172
L A KK D+EAW P G G + E+ S SNC DYQSRRL +RY GQ K +
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGGYGEITSTSNCTDYQSRRLKIRYKDQDGQNKFAHMV 381
Query: 173 YATACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
TA ATTRVI +ILE Q E GV+IP L K+ Y IPF
Sbjct: 382 NGTAIATTRVIISILENFQDEKGGVKIPKSLVKYTGFDY------IPF 423
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESSIIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G + E+ S SNC YQSRRL +RY N +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGGYGEITSTSNCTDYQSRRLKIRYKDQDGQN---KFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q E GV+IP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDEKGGVKIPKSLVKYTGFDYI 421
>gi|406672160|ref|ZP_11079393.1| seryl-tRNA synthetase [Facklamia hominis CCUG 36813]
gi|405579283|gb|EKB53395.1| seryl-tRNA synthetase [Facklamia hominis CCUG 36813]
Length = 426
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 118/200 (59%), Gaps = 11/200 (5%)
Query: 19 DDKY--LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
DD++ LI T+E P+ +RD L E LPI++ +S FR E GS GRDTRG+ R+HQF
Sbjct: 223 DDRHYVLIPTAEVPLTNYYRDEILSEDDLPIKFTAMSPSFRSEAGSAGRDTRGLIRMHQF 282
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVE ++ H D S+ L+ MI N+E L + YRVVN+ +G L +AAK DLE
Sbjct: 283 HKVE--MVKFAHPDHSYDELEAMIANAEGILQALNLPYRVVNLCTGDLGFSAAKTYDLEV 340
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETH 190
W PG +RE+ SCSN +Q+RR ++RY + K++ + A R + AILE +
Sbjct: 341 WVPGQATYREISSCSNTEAFQARRAMIRYRDHQDKLHYVHTLNGSGLAVGRTVVAILENY 400
Query: 191 QTETG-VRIPDCLRKFVPAV 209
Q G V+IP+ L ++ +
Sbjct: 401 QQADGSVKIPEVLVPYMGGI 420
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 6/162 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R+HQF KVE ++ H D S+ L+ MI N+E L + YRVV
Sbjct: 264 SEAGSAGRDTRGLIRMHQFHKVE--MVKFAHPDHSYDELEAMIANAEGILQALNLPYRVV 321
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
N+ +G L +AAK DLE W PG +RE+ SCSN A+Q+RR ++RY + +K+ +
Sbjct: 322 NLCTGDLGFSAAKTYDLEVWVPGQATYREISSCSNTEAFQARRAMIRY---RDHQDKLHY 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
VH LN + A R + AILE +Q G V+IP+ L ++ +
Sbjct: 379 VHTLNGSGLAVGRTVVAILENYQQADGSVKIPEVLVPYMGGI 420
>gi|16226853|gb|AAL16281.1|AF428351_1 At1g11870/F12F1_29 [Arabidopsis thaliana]
Length = 512
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 22/212 (10%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D+ LI T+E P+ +H DS L E++LP++Y+ S CFR E G+ G T+G++RVHQF K
Sbjct: 297 DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKA 356
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L A +K D+EAW P
Sbjct: 357 EMFVICQPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMP 414
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY--------GQTKQK-----------IYATACATT 180
G G F E+ S SNC D QSRRL +RY G K K + ATACA
Sbjct: 415 GLGRFGEISSASNCTDCQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVP 474
Query: 181 RVICAILETHQTETG-VRIPDCLRKFVPAVYL 211
R++ +LE +Q E G V IP+ LR F+ + L
Sbjct: 475 RMMVCLLENYQQEDGSVVIPEPLRPFMGGIEL 506
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 96/163 (58%), Gaps = 13/163 (7%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
T+G++RVHQF K E FV+ P D ES+ E+IQ E+ + LG+ ++ +++ + L
Sbjct: 344 TKGLYRVHQFSKAEMFVICQPEDSESFH--QELIQIEEDLFTSLGLHFKTLDMATADLGA 401
Query: 364 AAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRY-----GQTKKMNEK-----IE 413
A +K D+EAW PG G F E+ S SNC QSRRL +RY QT K +
Sbjct: 402 PAYRKFDIEAWMPGLGRFGEISSASNCTDCQSRRLGIRYRPSEPPQTGPKKGKANLPATK 461
Query: 414 FVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
FVH LNATACA R++ +LE +Q E G V IP+ LR F+ +
Sbjct: 462 FVHTLNATACAVPRMMVCLLENYQQEDGSVVIPEPLRPFMGGI 504
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 575
D+ LI T+E P+ +H DS L E++LP++Y+ S CFR E
Sbjct: 297 DQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTE 336
>gi|419542039|ref|ZP_14081172.1| seryl-tRNA synthetase [Campylobacter coli 2548]
gi|419584721|ref|ZP_14120786.1| seryl-tRNA synthetase [Campylobacter coli 202/04]
gi|380524032|gb|EIA49660.1| seryl-tRNA synthetase [Campylobacter coli 2548]
gi|380563325|gb|EIA86163.1| seryl-tRNA synthetase [Campylobacter coli 202/04]
Length = 411
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 9/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI+TSE P+ ++ L SLPI+ S CFR+E GS GRDTRGI R H
Sbjct: 215 KIEDEDLYLISTSEIPVTNLYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQH 274
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVE +T +S + +EM++ + + + LG+A+R + + +G L +AAK +DL
Sbjct: 275 QFEKVELVSITKSEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDL 332
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P +RE+ S SNC D+Q+RR +RY K K + ++ A R + AI+E
Sbjct: 333 EVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKNELVHTLNGSSLAVGRTLVAIME 392
Query: 189 THQTETG-VRIPDCLRKF 205
+Q + G ++IPD L+K+
Sbjct: 393 NYQDKEGRIQIPDVLKKY 410
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSITKSEQSDS--IFNEMVECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W P +RE+ S SNC +Q+RR +RY K N E VH LN
Sbjct: 321 DLGFSAAKTIDLEVWIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G ++IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGRIQIPDVLKKY 410
>gi|269120640|ref|YP_003308817.1| seryl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
gi|268614518|gb|ACZ08886.1| seryl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
Length = 423
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 10/199 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +LI T+E + +H+D L E+ LP Y G + CFR+E GSHG+D +GI R HQF K
Sbjct: 222 DDMFLIPTAEVTLTNLHKDEILAESELPKYYCGFTACFRREAGSHGKDMKGILRQHQFNK 281
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P + S+ L++M+ N+E L I YRV+ + SG + A+K DLE W
Sbjct: 282 VEMVKIVHPEN--SYDELEKMVNNAETVLQKLNIPYRVLALCSGDIGFGASKTYDLEVWI 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQKIY------ATACATTRVICAILETHQ 191
P +RE+ SCSN D+Q+RR +++Y +T +K Y + A R + AI+E +Q
Sbjct: 340 PSQNKYREISSCSNTEDFQARRAMIKYRSETDKKSYFVHTLNGSGLAVGRTLLAIMENYQ 399
Query: 192 TETG-VRIPDCLRKFVPAV 209
E G + IP+ L ++ +
Sbjct: 400 KEDGSIEIPEVLIPYMGGI 418
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 88/154 (57%), Gaps = 5/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GI R HQF KVE + P + S+ L++M+ N+E L I YRV+ + SG +
Sbjct: 269 DMKGILRQHQFNKVEMVKIVHPEN--SYDELEKMVNNAETVLQKLNIPYRVLALCSGDIG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A+K DLE W P +RE+ SCSN +Q+RR +++Y + ++K FVH LN +
Sbjct: 327 FGASKTYDLEVWIPSQNKYREISSCSNTEDFQARRAMIKY--RSETDKKSYFVHTLNGSG 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
A R + AI+E +Q E G + IP+ L ++ +
Sbjct: 385 LAVGRTLLAIMENYQKEDGSIEIPEVLIPYMGGI 418
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD +LI T+E + +H+D L E+ LP Y G + CFR+E
Sbjct: 222 DDMFLIPTAEVTLTNLHKDEILAESELPKYYCGFTACFRREA 263
>gi|419846933|ref|ZP_14370136.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 1-6B]
gi|419855658|ref|ZP_14378411.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 44B]
gi|386412477|gb|EIJ27144.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 1-6B]
gi|386415203|gb|EIJ29740.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 44B]
Length = 428
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E G+ G+DT GI RVHQF
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV D S+K + ++ +E A + + YR+++ +G L +AA+K D EA
Sbjct: 282 DKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILETHQ 191
W P G +REL S SNC +YQ+RRL +R G ATTR + AI+E HQ
Sbjct: 340 WVPTQGRYRELTSTSNCTEYQARRLNIRERMEDGGTRPVSTLNGTLATTRWLVAIMENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
+ G + IP +R ++
Sbjct: 400 QKDGSIEIPKAMRAYM 415
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF+KVE FV D S+K + ++ +E A + + YR+++ +G
Sbjct: 268 AGKDTSGIIRVHQFDKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-KIEFVHML 418
L +AA+K D EAW P G +REL S SNC YQ+RRL +R ++M + V L
Sbjct: 326 DLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTL 381
Query: 419 NATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
N T ATTR + AI+E HQ + G + IP +R ++ V E
Sbjct: 382 NGT-LATTRWLVAIMENHQQKDGSIEIPKAMRAYMGGTEVIE 422
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E A
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGA 267
>gi|149241134|pdb|2DQ3|A Chain A, Crystal Structure Of Aq_298
gi|149241135|pdb|2DQ3|B Chain B, Crystal Structure Of Aq_298
Length = 425
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 120/198 (60%), Gaps = 10/198 (5%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+ YLI T+E P+ ++R+ L E +LPI + C+R+E G++G+D RGI R HQF
Sbjct: 222 ERDNLYLIPTAEVPLTNLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE + P D S+ L+++++++EE LG+ YRVV + +G L +AAK D+E
Sbjct: 282 DKVELVKIVHP--DTSYDELEKLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYDIEV 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAILET 189
WFP +RE+ SCSNC D+Q+RR R+ +K + + A R + AILE
Sbjct: 340 WFPSQNKYREISSCSNCEDFQARRXNTRFKDSKTGKNRFVHTLNGSGLAVGRTLAAILEN 399
Query: 190 HQTETG-VRIPDCLRKFV 206
+Q E G V +P+ LR +V
Sbjct: 400 YQQEDGSVVVPEVLRDYV 417
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RGI R HQF+KVE + P D S+ L+++++++EE LG+ YRVV + +G L
Sbjct: 271 DIRGIIRQHQFDKVELVKIVHP--DTSYDELEKLVKDAEEVLQLLGLPYRVVELCTGDLG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK D+E WFP +RE+ SCSNC +Q+RR R+ +K K FVH LN +
Sbjct: 329 FSAAKTYDIEVWFPSQNKYREISSCSNCEDFQARRXNTRFKDSK--TGKNRFVHTLNGSG 386
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + AILE +Q E G V +P+ LR +V
Sbjct: 387 LAVGRTLAAILENYQQEDGSVVVPEVLRDYV 417
>gi|23466184|ref|NP_696787.1| seryl-tRNA synthetase [Bifidobacterium longum NCC2705]
gi|227546530|ref|ZP_03976579.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. longum ATCC
55813]
gi|239621528|ref|ZP_04664559.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|312133927|ref|YP_004001266.1| sers [Bifidobacterium longum subsp. longum BBMN68]
gi|322689877|ref|YP_004209611.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
gi|322691817|ref|YP_004221387.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
gi|419849248|ref|ZP_14372307.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 35B]
gi|419851907|ref|ZP_14374813.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 2-2B]
gi|30173167|sp|Q8G3W7.1|SYS_BIFLO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|23326924|gb|AAN25423.1| seryl-tRNA synthetase [Bifidobacterium longum NCC2705]
gi|227212847|gb|EEI80726.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239515403|gb|EEQ55270.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|291516425|emb|CBK70041.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
gi|311773221|gb|ADQ02709.1| SerS [Bifidobacterium longum subsp. longum BBMN68]
gi|320456673|dbj|BAJ67295.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
gi|320461213|dbj|BAJ71833.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
gi|386412187|gb|EIJ26869.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 2-2B]
gi|386412655|gb|EIJ27316.1| serine--tRNA ligase [Bifidobacterium longum subsp. longum 35B]
Length = 428
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E G+ G+DT GI RVHQF
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV D S+K + ++ +E A + + YR+++ +G L +AA+K D EA
Sbjct: 282 DKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILETHQ 191
W P G +REL S SNC +YQ+RRL +R G ATTR + AI+E HQ
Sbjct: 340 WVPTQGRYRELTSTSNCTEYQARRLNIRERMEDGGTRPVSTLNGTLATTRWLVAIMENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
+ G + IP +R ++
Sbjct: 400 QKDGSIEIPKAMRAYM 415
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF+KVE FV D S+K + ++ +E A + + YR+++ +G
Sbjct: 268 AGKDTSGIIRVHQFDKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-KIEFVHML 418
L +AA+K D EAW P G +REL S SNC YQ+RRL +R ++M + V L
Sbjct: 326 DLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTL 381
Query: 419 NATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
N T ATTR + AI+E HQ + G + IP +R ++ V E
Sbjct: 382 NGT-LATTRWLVAIMENHQQKDGSIEIPKAMRAYMGGKEVIE 422
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E A
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGA 267
>gi|449017083|dbj|BAM80485.1| serine--tRNA ligase, chloroplast or mitochondrial [Cyanidioschyzon
merolae strain 10D]
Length = 546
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 119/192 (61%), Gaps = 10/192 (5%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
L T+E P+ + + L E LPI+ VS CFR+E G+ G +TRG++RVHQF KVE F
Sbjct: 329 LAGTAEIPLGGYYANEILDETQLPIKMAAVSHCFRREAGAAGTETRGLYRVHQFTKVEMF 388
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
VL+ P +ES ++ E+ EE + LG+ YRV+++ + L + A +K D+EAW PG
Sbjct: 389 VLSRP--EESDRVHQELRSIEEELFDALGLHYRVLDMPTRELGNPAYRKFDIEAWMPGRN 446
Query: 143 AFRELVSCSNCLDYQSRRLLVRYG-QTKQKIY------ATACATTRVICAILETHQTETG 195
AF E+ S SNC DYQ+RRL +RY Q +K+ ATACA R+I +ILE Q + G
Sbjct: 447 AFGEISSASNCTDYQARRLNIRYREQVSEKLRFVHTLNATACAVPRMIVSILENFQEKDG 506
Query: 196 -VRIPDCLRKFV 206
V IP LR F+
Sbjct: 507 SVTIPQVLRPFL 518
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A +TRG++RVHQF KVE FVL+ P +ES + E+ EE + LG+ YRV+++ +
Sbjct: 369 AGTETRGLYRVHQFTKVEMFVLSRP--EESDRVHQELRSIEEELFDALGLHYRVLDMPTR 426
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + A +K D+EAW PG AF E+ S SNC YQ+RRL +RY ++++EK+ FVH LN
Sbjct: 427 ELGNPAYRKFDIEAWMPGRNAFGEISSASNCTDYQARRLNIRY--REQVSEKLRFVHTLN 484
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATACA R+I +ILE Q + G V IP LR F+
Sbjct: 485 ATACAVPRMIVSILENFQEKDGSVTIPQVLRPFL 518
>gi|289523031|ref|ZP_06439885.1| serine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503574|gb|EFD24738.1| serine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 430
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 10/201 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD +LI T+E P+ +H + L E LP+ Y + CFR+E GSHGRD RG+ R HQF
Sbjct: 225 ESDDLWLIPTAEVPLTNMHAEEILDEDVLPLYYTAYTPCFRREAGSHGRDVRGMLRQHQF 284
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE + +P + S+ L+++ QN+EE LG+ YRVV + +G + AA+K DLE
Sbjct: 285 DKVELVKICTP--ETSYDELEKLTQNAEEVLKRLGLPYRVVCLCTGDMGFAASKTYDLEV 342
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILET 189
W P +RE+ SCSNC D+Q+RR+ RY K + + A R + AI+E
Sbjct: 343 WLPSQNTYREISSCSNCEDFQARRMNTRYKPRGAKGTRFVHTLNGSGIAVGRCLIAIMEN 402
Query: 190 HQTETG-VRIPDCLRKFVPAV 209
+Q G ++IPD L ++ +
Sbjct: 403 YQQADGSIKIPDALVPYMKGL 423
Score = 120 bits (300), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 5/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D RG+ R HQF+KVE + +P + S+ L+++ QN+EE LG+ YRVV + +G +
Sbjct: 274 DVRGMLRQHQFDKVELVKICTP--ETSYDELEKLTQNAEEVLKRLGLPYRVVCLCTGDMG 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA+K DLE W P +RE+ SCSNC +Q+RR+ RY + + FVH LN +
Sbjct: 332 FAASKTYDLEVWLPSQNTYREISSCSNCEDFQARRMNTRY--KPRGAKGTRFVHTLNGSG 389
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
A R + AI+E +Q G ++IPD L ++ +
Sbjct: 390 IAVGRCLIAIMENYQQADGSIKIPDALVPYMKGL 423
>gi|390933698|ref|YP_006391203.1| seryl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569199|gb|AFK85604.1| Seryl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 423
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 10/195 (5%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D +LI T+E P+ ++R++ + LPI S CFRQE GS GRDTRG+ R HQF KV
Sbjct: 224 DYFLIPTAEVPVTNMYRETIIDGEKLPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E +T P ++S++ L++M+ ++E+ LGI YRVV+I +G L AAKK DLE W P
Sbjct: 284 ELVKITEP--EKSYEELEKMVSDAEDVLKTLGIPYRVVSICTGDLGFTAAKKYDLEVWMP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAILETHQT 192
G + E+ SCSNC D+Q+RR ++Y Q + + A R AILE +Q
Sbjct: 342 SYGRYVEISSCSNCEDFQARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQ 401
Query: 193 ETG-VRIPDCLRKFV 206
+ G V +P+ LR ++
Sbjct: 402 KDGSVVVPEALRPYM 416
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 95/154 (61%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF KVE +T P ++S++ L++M+ ++E+ LGI YRVV+I +G
Sbjct: 267 AGRDTRGLIRQHQFNKVELVKITEP--EKSYEELEKMVSDAEDVLKTLGIPYRVVSICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P G + E+ SCSNC +Q+RR ++Y K K ++VH LN
Sbjct: 325 DLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDFQARRANIKY--RPKDGGKAQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q + G V +P+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQKDGSVVVPEALRPYM 416
>gi|363422454|ref|ZP_09310530.1| seryl-tRNA synthetase [Rhodococcus pyridinivorans AK37]
gi|359733053|gb|EHK82057.1| seryl-tRNA synthetase [Rhodococcus pyridinivorans AK37]
Length = 420
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 118/205 (57%), Gaps = 8/205 (3%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE P+ H L + P RY G S+CFR+E GS+G+DTRGI RVHQF
Sbjct: 218 EEDDLYLVGTSEVPLAGYHSGEILDLSKGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQF 277
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV P +E+ + ++ + A + + YRV+++ +G L +A++K D EA
Sbjct: 278 DKVEMFVYCRP--EEAAAEHERLLAWERDMLAAIDVPYRVIDVAAGDLGSSASRKFDCEA 335
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC-----ATTRVICAILETHQ 191
W P +REL S SNC +Q+RRL +RY K A ATTR + A+LE HQ
Sbjct: 336 WVPTQERYRELTSTSNCTTFQARRLNIRYRDENGKPQTAATLNGTLATTRWLVALLENHQ 395
Query: 192 TETG-VRIPDCLRKFVPAVYLNEAG 215
G V++P+ L FV L AG
Sbjct: 396 QVDGSVKVPEALVPFVGREVLEPAG 420
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 93/160 (58%), Gaps = 7/160 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE FV P +E+ + ++ + A + + YRV+++ +G L
Sbjct: 267 DTRGIIRVHQFDKVEMFVYCRP--EEAAAEHERLLAWERDMLAAIDVPYRVIDVAAGDLG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A++K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 325 SSASRKFDCEAWVPTQERYRELTSTSNCTTFQARRLNIRY---RDENGKPQTAATLNGT- 380
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAG 461
ATTR + A+LE HQ G V++P+ L FV + AG
Sbjct: 381 LATTRWLVALLENHQQVDGSVKVPEALVPFVGREVLEPAG 420
Score = 43.1 bits (100), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DD YL+ TSE P+ H L + P RY G S+CFR+E
Sbjct: 218 EEDDLYLVGTSEVPLAGYHSGEILDLSKGPKRYAGWSSCFRREA 261
>gi|384200815|ref|YP_005586562.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum KACC
91563]
gi|338753822|gb|AEI96811.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum KACC
91563]
Length = 428
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E G+ G+DT GI RVHQF
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV D S+K + ++ +E A + + YR+++ +G L +AA+K D EA
Sbjct: 282 DKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILETHQ 191
W P G +REL S SNC +YQ+RRL +R G ATTR + AI+E HQ
Sbjct: 340 WVPTQGRYRELTSTSNCTEYQARRLNIRERMEDGGTRPVSTLNGTLATTRWLVAIMENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
+ G + IP +R ++
Sbjct: 400 QKDGSIEIPKAMRAYM 415
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF+KVE FV D S+K + ++ +E A + + YR+++ +G
Sbjct: 268 AGKDTSGIIRVHQFDKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AA+K D EAW P G +REL S SNC YQ+RRL +R + + V LN
Sbjct: 326 DLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQARRLNIR---ERMEDGGTRPVSTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
T ATTR + AI+E HQ + G + IP +R ++ V E
Sbjct: 383 GT-LATTRWLVAIMENHQQKDGSIEIPKAMRAYMGGKEVIE 422
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E A
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGA 267
>gi|433601980|ref|YP_007034349.1| Seryl-tRNA synthetase [Saccharothrix espanaensis DSM 44229]
gi|407879833|emb|CCH27476.1| Seryl-tRNA synthetase [Saccharothrix espanaensis DSM 44229]
Length = 416
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 113/194 (58%), Gaps = 11/194 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE P+ H D L RY G S+C+R+E GS+G+DTRGI RVHQF K
Sbjct: 220 DDLYLVGTSEVPLAGYHADEILDGER---RYAGWSSCYRREAGSYGKDTRGIIRVHQFNK 276
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P D E+ ++ EE A + + YRV++ +G L +AA+K D EAW
Sbjct: 277 VEMFSYVRPEDAEAEHA--RLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKFDCEAWI 334
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P A+REL S SNC +Q+RRL VRY K +I AT ATTR I AILE HQ
Sbjct: 335 PTQQAYRELTSTSNCTTFQARRLNVRYRDENGKPQIAATLNGTLATTRWIVAILENHQQP 394
Query: 194 TG-VRIPDCLRKFV 206
G V +P LR F+
Sbjct: 395 DGSVVVPRALRPFL 408
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE F P D E+ ++ EE A + + YRV++ +G L
Sbjct: 264 DTRGIIRVHQFNKVEMFSYVRPEDAEAEHA--RLLAWEEEMLAKIEVPYRVIDTAAGDLG 321
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+K D EAW P A+REL S SNC +Q+RRL VRY + N K + LN T
Sbjct: 322 TSAARKFDCEAWIPTQQAYRELTSTSNCTTFQARRLNVRY---RDENGKPQIAATLNGT- 377
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AILE HQ G V +P LR F+
Sbjct: 378 LATTRWIVAILENHQQPDGSVVVPRALRPFL 408
>gi|415733876|ref|ZP_11474374.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|419653980|ref|ZP_14184936.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-872]
gi|419657826|ref|ZP_14188472.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-1]
gi|419665390|ref|ZP_14195460.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-7]
gi|419686336|ref|ZP_14214770.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1798]
gi|315926699|gb|EFV06078.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|380631961|gb|EIB50098.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-872]
gi|380634191|gb|EIB52086.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-1]
gi|380643720|gb|EIB60938.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-7]
gi|380664621|gb|EIB80216.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1798]
Length = 411
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 118/194 (60%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSIAKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE + P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSIAKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|86153826|ref|ZP_01072029.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|419662911|ref|ZP_14193118.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-4]
gi|419669580|ref|ZP_14199360.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-11]
gi|85842787|gb|EAQ59999.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|380644006|gb|EIB61211.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-4]
gi|380646891|gb|EIB63829.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-11]
Length = 411
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 118/194 (60%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 219 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 279 VELVSIAKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 337 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 396
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 397 KEGKIHIPDVLKKY 410
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE + P +S +EM++ + + + LG+A+R + + +G
Sbjct: 263 AGRDTRGIIRQHQFEKVELVSIAKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 320
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 321 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 377
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 378 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 410
>gi|334882679|emb|CCB83724.1| seryl-tRNA synthetase 2 [Lactobacillus pentosus MP-10]
gi|339637308|emb|CCC16207.1| seryl-tRNA synthetase 2 [Lactobacillus pentosus IG1]
Length = 425
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 110/194 (56%), Gaps = 9/194 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D LI T+E P+ +RD +P LP+ + +S FR+E GS GRDT+G+ R+HQF KV
Sbjct: 224 DLTLIPTAEVPLVNYYRDEVIPAEKLPVYFTALSPAFREEAGSAGRDTKGLIRLHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D SW L+++ N+E LG+ Y V+ + +G ++ AA DLE WFP
Sbjct: 284 EMVKFTKPED--SWDELEKLTNNAESLLKKLGLPYHVITLTTGDMSFTAAMTHDLEVWFP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTE 193
+RE+ SCSNC D+Q+RR ++Y K+ + A R + AILE +Q E
Sbjct: 342 EQNKYREISSCSNCTDFQARRAHIQYRDDDGKLQFVHTLNGSGLAVGRTVAAILENYQNE 401
Query: 194 TG-VRIPDCLRKFV 206
G V IPD L ++
Sbjct: 402 DGTVTIPDVLVPYM 415
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 6/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+G+ R+HQF KVE T P D SW L+++ N+E LG+ Y V+ + +G
Sbjct: 267 AGRDTKGLIRLHQFNKVEMVKFTKPED--SWDELEKLTNNAESLLKKLGLPYHVITLTTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
++ AA DLE WFP +RE+ SCSNC +Q+RR ++Y + + K++FVH LN
Sbjct: 325 DMSFTAAMTHDLEVWFPEQNKYREISSCSNCTDFQARRAHIQY---RDDDGKLQFVHTLN 381
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R + AILE +Q E G V IPD L ++
Sbjct: 382 GSGLAVGRTVAAILENYQNEDGTVTIPDVLVPYM 415
>gi|359403127|ref|ZP_09196034.1| seryl-tRNA synthetase [Spiroplasma melliferum KC3]
gi|357968344|gb|EHJ90853.1| seryl-tRNA synthetase [Spiroplasma melliferum KC3]
Length = 422
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 120/195 (61%), Gaps = 8/195 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+ YLI T+E P+ ++R+ L + LPI + + CFRQE GS GRDT+GI R+HQF
Sbjct: 222 EKDNLYLIPTAEVPVTNLYREEILEKDQLPIYHTAYTPCFRQEAGSAGRDTKGIIRLHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE T+ ++ S++ L++M+ ++E L I YRV+ + SG + ++ K D+E
Sbjct: 282 KKVEMVKFTT--EEASFEELEKMVLDAENILQLLEIPYRVILLCSGDMGFSSTKTYDVEV 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-----ATACATTRVICAILETHQ 191
W PG +RE+ SCSNCLD+Q+RR+ +RY + Y + A R+I AILE +Q
Sbjct: 340 WMPGQNKYREISSCSNCLDFQARRMKLRYRDDNEIKYVHTLNGSGLAIDRLIAAILENYQ 399
Query: 192 TETG-VRIPDCLRKF 205
E G + IP L+ +
Sbjct: 400 NEDGTITIPKKLQPY 414
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 97/153 (63%), Gaps = 7/153 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GI R+HQF+KVE T+ ++ S++ L++M+ ++E L I YRV+ + SG
Sbjct: 268 AGRDTKGIIRLHQFKKVEMVKFTT--EEASFEELEKMVLDAENILQLLEIPYRVILLCSG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+ ++ K D+E W PG +RE+ SCSNCL +Q+RR+ +RY + + +I++VH LN
Sbjct: 326 DMGFSSTKTYDVEVWMPGQNKYREISSCSNCLDFQARRMKLRY----RDDNEIKYVHTLN 381
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+ A R+I AILE +Q E G + IP L+ +
Sbjct: 382 GSGLAIDRLIAAILENYQNEDGTITIPKKLQPY 414
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTYFH 586
E D+ YLI T+E P+ ++R+ L + LPI + + CFRQE + G+ R +
Sbjct: 222 EKDNLYLIPTAEVPVTNLYREEILEKDQLPIYHTAYTPCFRQEAGSAGRDTKGIIRLHQF 281
Query: 587 VTCAQREGLLSEATSEEVDQ 606
+ EA+ EE+++
Sbjct: 282 KKVEMVKFTTEEASFEELEK 301
>gi|205355961|ref|ZP_03222729.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346085|gb|EDZ32720.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
Length = 263
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 9/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLI+TSE P+ ++ L +LPI+ S CFR+E GS GRDTRGI R HQFEK
Sbjct: 71 EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEK 130
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE +T P +S + +EM++ + + + LG+A+R + + +G L +AAK +DLE W
Sbjct: 131 VELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWL 188
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
PG +RE+ S SNC D+Q+RR +RY + K + ++ A R + AI+E +Q
Sbjct: 189 PGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQD 248
Query: 193 ETG-VRIPDCLRKF 205
+ G + IPD L+K+
Sbjct: 249 KEGKIHIPDVLKKY 262
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI R HQFEKVE +T P +S +EM++ + + + LG+A+R + + +G
Sbjct: 115 AGRDTRGIIRQHQFEKVELVSITKPEQSDS--VFNEMLECASDLLSSLGLAHRHLMLCTG 172
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAK +DLE W PG +RE+ S SNC +Q+RR +RY + N E VH LN
Sbjct: 173 DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN---ELVHTLN 229
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
++ A R + AI+E +Q + G + IPD L+K+
Sbjct: 230 GSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKY 262
>gi|333917771|ref|YP_004491352.1| seryl-tRNA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333479992|gb|AEF38552.1| Seryl-tRNA synthetase [Amycolicicoccus subflavus DQS3-9A1]
Length = 419
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 116/194 (59%), Gaps = 8/194 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE PI H L ++ P RY G S+CFR+E GS+G+DTRGI RVHQF+K
Sbjct: 219 DDLYLVGTSEVPIAGYHSGEILDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDK 278
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F P DE+ + ++ ++ + + + YR++++ SG L +A +K D EAW
Sbjct: 279 VEMFSYCRP--DEATAEHNRLLGWEKDMLSAIEVPYRIIDVASGDLGSSAVRKFDCEAWI 336
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG--QTKQKIYAT---ACATTRVICAILETHQTE 193
P +REL S SNC +Q+RRL +RY K ++ AT ATTR I A+LE HQ
Sbjct: 337 PTQQTYRELTSTSNCTTFQARRLGIRYRDENGKPQMAATLNGTLATTRWIVALLENHQQA 396
Query: 194 TG-VRIPDCLRKFV 206
G VR+P L FV
Sbjct: 397 DGSVRVPAALVPFV 410
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF+KVE F P DE+ + ++ ++ + + + YR++++ SG L
Sbjct: 266 DTRGIIRVHQFDKVEMFSYCRP--DEATAEHNRLLGWEKDMLSAIEVPYRIIDVASGDLG 323
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A +K D EAW P +REL S SNC +Q+RRL +RY + N K + LN T
Sbjct: 324 SSAVRKFDCEAWIPTQQTYRELTSTSNCTTFQARRLGIRY---RDENGKPQMAATLNGT- 379
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I A+LE HQ G VR+P L FV
Sbjct: 380 LATTRWIVALLENHQQADGSVRVPAALVPFV 410
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE PI H L ++ P RY G S+CFR+E
Sbjct: 219 DDLYLVGTSEVPIAGYHSGEILDLSAGPRRYAGWSSCFRREA 260
>gi|213693031|ref|YP_002323617.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|384200259|ref|YP_005586002.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|254783008|sp|B7GN83.1|SYS_BIFLS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|213524492|gb|ACJ53239.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|320459211|dbj|BAJ69832.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
Length = 428
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E G+ G+DT GI RVHQF
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
+KVE FV D S+K + ++ +E A + + YR+++ +G L +AA+K D EA
Sbjct: 282 DKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEA 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILETHQ 191
W P G +REL S SNC +YQ+RRL +R G ATTR + AI+E HQ
Sbjct: 340 WVPTQGRYRELTSTSNCTEYQARRLNIRERMEDGGTRPVSTLNGTLATTRWLVAIMENHQ 399
Query: 192 TETG-VRIPDCLRKFV 206
+ G + IP +R ++
Sbjct: 400 QKDGSIEIPKAMRAYM 415
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT GI RVHQF+KVE FV D S+K + ++ +E A + + YR+++ +G
Sbjct: 268 AGKDTSGIIRVHQFDKVEMFVYAKQED--SYKEHEHLLAMEQEMLAKVEVPYRIIDTAAG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-KIEFVHML 418
L +AA+K D EAW P G +REL S SNC YQ+RRL +R ++M + V L
Sbjct: 326 DLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQARRLNIR----ERMEDGGTRPVSTL 381
Query: 419 NATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNE 459
N T ATTR + AI+E HQ + G + IP +R ++ V E
Sbjct: 382 NGT-LATTRWLVAIMENHQQKDGSIEIPKAMRAYMGGKEVIE 422
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD+YL+ TSE + +H + L + P+RY G S+C+R+E A
Sbjct: 222 EPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGA 267
>gi|20806566|ref|NP_621737.1| seryl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|254478338|ref|ZP_05091717.1| seryl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
gi|30173181|sp|Q8RDJ5.1|SYS_THETN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|20515006|gb|AAM23341.1| Seryl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|214035696|gb|EEB76391.1| seryl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
Length = 425
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 121/200 (60%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E D +LI T+E P+ ++R++ + LPI + S CFRQE G+ GRDTRG+ R H
Sbjct: 219 KVEGTDYFLIPTAEVPVTNLYRETIIDGEQLPIYHCAYSACFRQEAGAAGRDTRGLIRQH 278
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+KVE T P D+S++ L++M +++EE LG+ YRVV I +G L A+KK D+
Sbjct: 279 QFDKVELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDI 336
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQKIY---ATACATTRVICAIL 187
E W P G + E+ SCSNC D+Q+RR +RY G Q ++ + A R AIL
Sbjct: 337 EVWMPSYGRYVEISSCSNCEDFQARRANIRYRPKGGGKLQYVHTLNGSGVAVGRTFAAIL 396
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P+ LR ++
Sbjct: 397 ENYQQEDGSVVVPEVLRPYM 416
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 95/154 (61%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRG+ R HQF+KVE T P D+S++ L++M +++EE LG+ YRVV I +G
Sbjct: 267 AGRDTRGLIRQHQFDKVELVKFTEP--DKSYEELEKMTRDAEEVLQALGLPYRVVAICTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L A+KK D+E W P G + E+ SCSNC +Q+RR +RY K K+++VH LN
Sbjct: 325 DLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDFQARRANIRY--RPKGGGKLQYVHTLN 382
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R AILE +Q E G V +P+ LR ++
Sbjct: 383 GSGVAVGRTFAAILENYQQEDGSVVVPEVLRPYM 416
>gi|237809053|ref|YP_002893493.1| seryl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259516216|sp|C4L937.1|SYS_TOLAT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|237501314|gb|ACQ93907.1| seryl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 432
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 115/194 (59%), Gaps = 9/194 (4%)
Query: 23 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQF 82
LI T+E P+ + RD E +LP++ S CFR E GS+GRDTRG+ R+HQF+KVE
Sbjct: 237 LIPTAEVPLTNIARDEIYDEKALPVKMTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMV 296
Query: 83 VLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSG 142
L P ++SW L+EM+ ++E+ LG+ YRVV++ +G + +AAK DLE W P
Sbjct: 297 QLVHP--EKSWDALEEMVGHAEKVLQLLGLPYRVVSLCTGDMGFSAAKTYDLEVWLPAQN 354
Query: 143 AFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQTETG- 195
+RE+ SCSNC D+Q+RR+ R K + + A R + A+LE +Q G
Sbjct: 355 TYREISSCSNCTDFQARRMQARVRGADSKPQLLHTLNGSGLAVGRTLVAVLENYQQADGR 414
Query: 196 VRIPDCLRKFVPAV 209
+ +P+ LR ++ +
Sbjct: 415 IEVPEVLRPYMSGL 428
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 94/154 (61%), Gaps = 6/154 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R+HQF+KVE L P ++SW L+EM+ ++E+ LG+ YRVV++ +G +
Sbjct: 280 DTRGLIRMHQFDKVEMVQLVHP--EKSWDALEEMVGHAEKVLQLLGLPYRVVSLCTGDMG 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAK DLE W P +RE+ SCSNC +Q+RR+ R + + K + +H LN +
Sbjct: 338 FSAAKTYDLEVWLPAQNTYREISSCSNCTDFQARRMQAR---VRGADSKPQLLHTLNGSG 394
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
A R + A+LE +Q G + +P+ LR ++ +
Sbjct: 395 LAVGRTLVAVLENYQQADGRIEVPEVLRPYMSGL 428
>gi|406874341|gb|EKD24318.1| hypothetical protein ACD_81C00055G0008 [uncultured bacterium]
Length = 440
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 118/195 (60%), Gaps = 7/195 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
D K+L+ TSE + A + D L E LPIR G S C+R E+GS+G+DT+G++RVH+F K
Sbjct: 237 DKKFLVGTSEPSLLAYYSDEVLKEEQLPIRLAGYSQCYRSEIGSYGKDTKGMYRVHEFMK 296
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQ V+ +DE+ K+ EM+ S E + +LG+ YR + I +G ++ + D+EAW
Sbjct: 297 VEQVVIAKADEDEANKLQQEMMDVSREMHEELGLPYRQIQICTGDMSAGKFRAFDIEAWM 356
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRY---GQTKQKIYA---TACATTRVICAILETHQT 192
PG + E S SN +D+QSRRL V+Y ++ +Y TA + R AILE +Q
Sbjct: 357 PGMNRWGETGSASNFVDWQSRRLNVKYIDKNGDRKYVYMLNNTALPSPRSFIAILENYQQ 416
Query: 193 ETG-VRIPDCLRKFV 206
G V IP+ L+K+
Sbjct: 417 ADGSVLIPEVLQKYT 431
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G++RVH+F KVEQ V+ +DE+ K EM+ S E + +LG+ YR + I +G ++
Sbjct: 284 DTKGMYRVHEFMKVEQVVIAKADEDEANKLQQEMMDVSREMHEELGLPYRQIQICTGDMS 343
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+ D+EAW PG + E S SN + +QSRRL V+Y N ++V+MLN TA
Sbjct: 344 AGKFRAFDIEAWMPGMNRWGETGSASNFVDWQSRRLNVKYIDK---NGDRKYVYMLNNTA 400
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ R AILE +Q G V IP+ L+K+
Sbjct: 401 LPSPRSFIAILENYQQADGSVLIPEVLQKYT 431
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTYFHVT 588
D K+L+ TSE + A + D L E LPIR G S C+R E + GM R + +
Sbjct: 237 DKKFLVGTSEPSLLAYYSDEVLKEEQLPIRLAGYSQCYRSEIGSYGKDTKGMYRVHEFMK 296
Query: 589 CAQ 591
Q
Sbjct: 297 VEQ 299
>gi|254421409|ref|ZP_05035127.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7335]
gi|196188898|gb|EDX83862.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7335]
Length = 449
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 115/196 (58%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +L T+E P+ +HRD L LP+ Y + CFR+E GS+GRDTRG+ R+HQF K
Sbjct: 250 DDLWLTPTAEVPLTNLHRDEVLASDELPLNYCAYTPCFRREAGSYGRDTRGLIRLHQFNK 309
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P + S+ L+++ ++E+ L + YRV+ + SG L A K DLE W
Sbjct: 310 VEMYKFVHP--ETSFDELEKLTADAEDILQQLKLPYRVIELCSGDLGFNATKTYDLEVWL 367
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAILETHQ 191
P +G +RE+ SCSNC+D+Q RR +R+ +K + + A R + AILE +Q
Sbjct: 368 PSAGKYREISSCSNCVDFQGRRANIRFKAAGKKGTEYVHTLNGSGLAVGRTMAAILENYQ 427
Query: 192 TETG-VRIPDCLRKFV 206
G V IP+ L+K++
Sbjct: 428 RPDGSVGIPEVLQKYM 443
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R+HQF KVE + P + S+ L+++ ++E+ L + YRV+ + SG L
Sbjct: 297 DTRGLIRLHQFNKVEMYKFVHP--ETSFDELEKLTADAEDILQQLKLPYRVIELCSGDLG 354
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A K DLE W P +G +RE+ SCSNC+ +Q RR +R+ K + E+VH LN +
Sbjct: 355 FNATKTYDLEVWLPSAGKYREISSCSNCVDFQGRRANIRFKAAGK--KGTEYVHTLNGSG 412
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A R + AILE +Q G V IP+ L+K++
Sbjct: 413 LAVGRTMAAILENYQRPDGSVGIPEVLQKYM 443
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD +L T+E P+ +HRD L LP+ Y + CFR+E
Sbjct: 250 DDLWLTPTAEVPLTNLHRDEVLASDELPLNYCAYTPCFRREA 291
>gi|438118363|ref|ZP_20871340.1| seryl-tRNA synthetase [Spiroplasma melliferum IPMB4A]
gi|434155790|gb|ELL44708.1| seryl-tRNA synthetase [Spiroplasma melliferum IPMB4A]
Length = 422
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 119/195 (61%), Gaps = 8/195 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E D+ YLI T+E P+ ++R+ L + LPI + + CFRQE GS GRDT+GI R+HQF
Sbjct: 222 EKDNLYLIPTAEVPVTNLYREEILEKDQLPIYHTAYTPCFRQEAGSAGRDTKGIIRLHQF 281
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
KVE T+ ++ S++ L++M+ ++E L I YRV+ + SG + ++ K D+E
Sbjct: 282 NKVEMVKFTT--EEASFEELEKMVLDAENILQLLEIPYRVILLCSGDMGFSSTKTYDVEV 339
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-----ATACATTRVICAILETHQ 191
W PG +RE+ SCSNCLD+Q+RR+ +RY + Y + A R+I AILE +Q
Sbjct: 340 WMPGQNKYREISSCSNCLDFQARRMKLRYRDDNEIKYVHTLNGSGLAIDRLIAAILENYQ 399
Query: 192 TETG-VRIPDCLRKF 205
E G + IP L+ +
Sbjct: 400 NEDGTITIPKKLQPY 414
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 96/153 (62%), Gaps = 7/153 (4%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GI R+HQF KVE T+ ++ S++ L++M+ ++E L I YRV+ + SG
Sbjct: 268 AGRDTKGIIRLHQFNKVEMVKFTT--EEASFEELEKMVLDAENILQLLEIPYRVILLCSG 325
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
+ ++ K D+E W PG +RE+ SCSNCL +Q+RR+ +RY + + +I++VH LN
Sbjct: 326 DMGFSSTKTYDVEVWMPGQNKYREISSCSNCLDFQARRMKLRY----RDDNEIKYVHTLN 381
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+ A R+I AILE +Q E G + IP L+ +
Sbjct: 382 GSGLAIDRLIAAILENYQNEDGTITIPKKLQPY 414
>gi|407937831|ref|YP_006853472.1| seryl-tRNA ligase [Acidovorax sp. KKS102]
gi|407895625|gb|AFU44834.1| seryl-tRNA ligase [Acidovorax sp. KKS102]
Length = 438
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 12/210 (5%)
Query: 4 KGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSH 63
KG + G+ P+ L YLI TSE P+ RD + EA LPI+ + CFR E GS+
Sbjct: 226 KGGQDGEPVPDNAAL---YLIPTSEVPLTNFVRDVVVAEADLPIKLTAHTPCFRSEAGSY 282
Query: 64 GRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGA 123
GRDTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRV+++ +G
Sbjct: 283 GRDTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAETVLQKLGLPYRVMSLCTGD 340
Query: 124 LNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATAC 177
+ AAK DLE W P +RE+ S SNC +Q+RRL R+ + K + +
Sbjct: 341 MGFGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKNELLHTLNGSGL 400
Query: 178 ATTRVICAILETHQTETG-VRIPDCLRKFV 206
A R + A+LE +Q G V +P+ LR ++
Sbjct: 401 AVGRTLVAVLENYQQADGSVTVPEVLRPYL 430
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRG+ R HQF+KVE + H D+S++ L+EM +++E LG+ YRV+++ +G +
Sbjct: 285 DTRGMIRQHQFDKVEMVQIV--HPDKSYEALEEMTRHAETVLQKLGLPYRVMSLCTGDMG 342
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAK DLE W P +RE+ S SNC A+Q+RRL R+ K K E +H LN +
Sbjct: 343 FGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARF---KNAQGKNELLHTLNGSG 399
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
A R + A+LE +Q G V +P+ LR ++ V
Sbjct: 400 LAVGRTLVAVLENYQQADGSVTVPEVLRPYLGGTAV 435
>gi|300767807|ref|ZP_07077717.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|300494792|gb|EFK29950.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
Length = 425
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 110/194 (56%), Gaps = 9/194 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D LI T+E P+ +RD +P LP+ + +S FR+E GS GRDT+G+ R+HQF KV
Sbjct: 224 DLTLIPTAEVPLVNYYRDEVIPAEKLPVYFTALSPAFREEAGSAGRDTKGLIRLHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D SW L+++ N+E LG+ Y V+ + +G ++ AA DLE WFP
Sbjct: 284 EMVKFTKPED--SWDELEKLTNNAESLLKKLGLPYHVITLTTGDMSFTAAMTHDLEVWFP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTE 193
+RE+ SCSNC D+Q+RR ++Y K+ + A R + AILE +Q E
Sbjct: 342 EQDKYREISSCSNCTDFQARRAHIQYRDDDGKLQFVHTLNGSGLAVGRTVAAILENYQNE 401
Query: 194 TG-VRIPDCLRKFV 206
G V IPD L ++
Sbjct: 402 DGTVTIPDVLVPYM 415
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 6/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+G+ R+HQF KVE T P D SW L+++ N+E LG+ Y V+ + +G
Sbjct: 267 AGRDTKGLIRLHQFNKVEMVKFTKPED--SWDELEKLTNNAESLLKKLGLPYHVITLTTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
++ AA DLE WFP +RE+ SCSNC +Q+RR ++Y + + K++FVH LN
Sbjct: 325 DMSFTAAMTHDLEVWFPEQDKYREISSCSNCTDFQARRAHIQY---RDDDGKLQFVHTLN 381
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R + AILE +Q E G V IPD L ++
Sbjct: 382 GSGLAVGRTVAAILENYQNEDGTVTIPDVLVPYM 415
>gi|219685837|ref|ZP_03540645.1| serine--tRNA ligase [Borrelia garinii Far04]
gi|219672611|gb|EED29642.1| serine--tRNA ligase [Borrelia garinii Far04]
Length = 425
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 132/228 (57%), Gaps = 19/228 (8%)
Query: 2 IGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG 61
IG + +S K E DKYL+ TSE + + + + + +LPI+ G S CFR+E G
Sbjct: 205 IGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAG 263
Query: 62 SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVS 121
++G+ ++G++RVHQF KVE F +ES + DE + E+ + +L I YRV+NI S
Sbjct: 264 AYGQLSKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICS 321
Query: 122 GALNHAAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQKIYA--- 174
L A KK D+EAW P G G++ E+ S SNC DYQSRRL +RY Q +Q +A
Sbjct: 322 FDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRYKDQDEQNKFAHMV 381
Query: 175 --TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYLNEAGEIPF 219
TA ATTRVI +ILE Q + GVRIP L K+ Y IPF
Sbjct: 382 NGTAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDY------IPF 423
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 96/158 (60%), Gaps = 9/158 (5%)
Query: 304 TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNH 363
++G++RVHQF KVE F +ES DE + E+ + +L I YRV+NI S L
Sbjct: 269 SKGLYRVHQFSKVEMFCFCKA--EESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGS 326
Query: 364 AAAKKLDLEAWFP---GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420
A KK D+EAW P G G++ E+ S SNC YQSRRL +RY K +E+ +F HM+N
Sbjct: 327 PAYKKYDIEAWMPGRDGKGSYGEVTSTSNCTDYQSRRLKIRY---KDQDEQNKFAHMVNG 383
Query: 421 TACATTRVICAILETHQTET-GVRIPDCLRKFVPAVYV 457
TA ATTRVI +ILE Q + GVRIP L K+ Y+
Sbjct: 384 TAIATTRVIISILENFQDQKGGVRIPKSLVKYTGFDYI 421
>gi|254525907|ref|ZP_05137959.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
gi|221537331|gb|EEE39784.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
Length = 425
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD +L T+E P+ A HR+ + LPI+Y+ S CFR+E GS+G+DT+G+ R+HQF K
Sbjct: 226 DDLWLSPTAEVPLTAFHRNELIDPKQLPIKYVAYSPCFRREAGSYGKDTKGLIRLHQFNK 285
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P +S + ++ ++E L + YR+V+I +G L ++++ DLE W
Sbjct: 286 VELYWFCDP--TKSLEAHKKITSDAENILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWL 343
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY-----ATACATTRVICAILET-HQT 192
P S +RE+ SCSNCLD+Q+RR +R K+ IY + A R + AILE QT
Sbjct: 344 PSSKCYREISSCSNCLDFQARRSSIRSKIDKKNIYLHTLNGSGLAIGRTMAAILENGQQT 403
Query: 193 ETGVRIPDCLRKFVPAVYLNEA 214
+ V+IPD L + + +L A
Sbjct: 404 DGSVKIPDALVPYFGSNFLKNA 425
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 7/159 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G+ R+HQF KVE + P +S + ++ ++E L + YR+V+I +G L
Sbjct: 273 DTKGLIRLHQFNKVELYWFCDP--TKSLEAHKKITSDAENILKKLNLPYRLVDICTGDLG 330
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
++++ DLE W P S +RE+ SCSNCL +Q+RR +R K+++K ++H LN +
Sbjct: 331 FSSSRTFDLEVWLPSSKCYREISSCSNCLDFQARRSSIR----SKIDKKNIYLHTLNGSG 386
Query: 423 CATTRVICAILET-HQTETGVRIPDCLRKFVPAVYVNEA 460
A R + AILE QT+ V+IPD L + + ++ A
Sbjct: 387 LAIGRTMAAILENGQQTDGSVKIPDALVPYFGSNFLKNA 425
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DD +L T+E P+ A HR+ + LPI+Y+ S CFR+E +
Sbjct: 226 DDLWLSPTAEVPLTAFHRNELIDPKQLPIKYVAYSPCFRREAGS 269
>gi|383809346|ref|ZP_09964866.1| serine--tRNA ligase [Rothia aeria F0474]
gi|383447698|gb|EID50675.1| serine--tRNA ligase [Rothia aeria F0474]
Length = 433
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 120/220 (54%), Gaps = 23/220 (10%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DD YL+ TSE + H D L + P +YLG S+C+R+E G+ G+DTRGI RVHQF
Sbjct: 221 ERDDLYLVGTSEVALAGYHMDEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQF 280
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
K E FV E ++ ++M EE G+AYRV++ +G L +AA+K D EA
Sbjct: 281 NKAEMFVYCQVEQAE--EIHEQMRALEEEMLQKCGLAYRVIDTAAGDLGTSAARKFDCEA 338
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRL--------------LVRYGQTKQ-KIYATACATTR 181
W P G +REL S SNC YQ+RRL VR G+T+ ATTR
Sbjct: 339 WVPTQGTYRELTSTSNCTTYQARRLNIRERTADTVDDAGNVRKGRTRAVATLNGTLATTR 398
Query: 182 VICAILETHQTETG-VRIPDCLRKFVPAVYLNEAGEIPFV 220
+ AILETHQ G VRIP+ LR Y+ A IP V
Sbjct: 399 WVVAILETHQQPDGSVRIPEALRP-----YMGGAEVIPVV 433
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 94/175 (53%), Gaps = 16/175 (9%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DTRGI RVHQF K E FV E + ++M EE G+AYRV++ +G
Sbjct: 267 AGKDTRGIIRVHQFNKAEMFVYCQVEQAE--EIHEQMRALEEEMLQKCGLAYRVIDTAAG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNE-------KI 412
L +AA+K D EAW P G +REL S SNC YQ+RRL +R +++ +
Sbjct: 325 DLGTSAARKFDCEAWVPTQGTYRELTSTSNCTTYQARRLNIRERTADTVDDAGNVRKGRT 384
Query: 413 EFVHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFV 466
V LN T ATTR + AILETHQ G VRIP+ LR ++ V IP V
Sbjct: 385 RAVATLNGT-LATTRWVVAILETHQQPDGSVRIPEALRPYMGGAEV-----IPVV 433
Score = 43.5 bits (101), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
E DD YL+ TSE + H D L + P +YLG S+C+R+E A
Sbjct: 221 ERDDLYLVGTSEVALAGYHMDEILDLSDGPKKYLGWSSCYRREAGA 266
>gi|254556005|ref|YP_003062422.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1]
gi|254044932|gb|ACT61725.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1]
Length = 425
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 110/194 (56%), Gaps = 9/194 (4%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D LI T+E P+ +RD +P LP+ + +S FR+E GS GRDT+G+ R+HQF KV
Sbjct: 224 DLTLIPTAEVPLVNYYRDEVIPAEKLPVYFTALSPAFREEAGSAGRDTKGLIRLHQFNKV 283
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E T P D SW L+++ N+E LG+ Y V+ + +G ++ AA DLE WFP
Sbjct: 284 EMVKFTKPED--SWDELEKLTNNAESLLKKLGLPYHVITLTTGDMSFTAAMTHDLEVWFP 341
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIY------ATACATTRVICAILETHQTE 193
+RE+ SCSNC D+Q+RR ++Y K+ + A R + AILE +Q E
Sbjct: 342 EQDKYREISSCSNCTDFQARRAHIQYRDDDGKLQFVHTLNGSGLAVGRTVAAILENYQNE 401
Query: 194 TG-VRIPDCLRKFV 206
G V IPD L ++
Sbjct: 402 DGTVTIPDVLVPYM 415
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 6/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+G+ R+HQF KVE T P D SW L+++ N+E LG+ Y V+ + +G
Sbjct: 267 AGRDTKGLIRLHQFNKVEMVKFTKPED--SWDELEKLTNNAESLLKKLGLPYHVITLTTG 324
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
++ AA DLE WFP +RE+ SCSNC +Q+RR ++Y + + K++FVH LN
Sbjct: 325 DMSFTAAMTHDLEVWFPEQDKYREISSCSNCTDFQARRAHIQY---RDDDGKLQFVHTLN 381
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+ A R + AILE +Q E G V IPD L ++
Sbjct: 382 GSGLAVGRTVAAILENYQNEDGTVTIPDVLVPYM 415
>gi|189485027|ref|YP_001955968.1| seryl-tRNA synthetase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|238065109|sp|B1GZ25.1|SYS_UNCTG RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|170286986|dbj|BAG13507.1| seryl-tRNA synthetase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 423
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 122/196 (62%), Gaps = 10/196 (5%)
Query: 18 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFE 77
+DD YLI T+E P+ ++RD L E++LP +Y+ S CFR+E GS+G+DT+G+ R HQF+
Sbjct: 222 IDDLYLIPTAEVPVTNIYRDDVLEESALPQKYVSYSACFRRESGSYGKDTKGLIRNHQFD 281
Query: 78 KVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAW 137
KVE P + S + L+ ++ ++ LG+ YRVV + +G + +++K DLE W
Sbjct: 282 KVELVKFAKP--ETSSEELESLVLDAGNVLELLGLPYRVVLLSTGDIGFSSSKTYDLEVW 339
Query: 138 FPGSGAFRELVSCSNCLDYQSRRL--LVRYGQTKQK-----IYATACATTRVICAILETH 190
F G G +RE+ SCSN D+Q+RR+ V+Y Q K++ + + A R AILE +
Sbjct: 340 FAGYGIYREISSCSNLKDFQARRMNIKVKYSQNKKRELLHTLNGSGVAVGRTFAAILENY 399
Query: 191 QTETG-VRIPDCLRKF 205
Q E G V IP+ LR++
Sbjct: 400 QQEDGSVVIPNSLREY 415
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+G+ R HQF+KVE P + S + L+ ++ ++ LG+ YRVV + +G +
Sbjct: 270 DTKGLIRNHQFDKVELVKFAKP--ETSSEELESLVLDAGNVLELLGLPYRVVLLSTGDIG 327
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRL--LVRYGQTKKMNEKIEFVHMLNA 420
+++K DLE WF G G +RE+ SCSN +Q+RR+ V+Y Q KK E +H LN
Sbjct: 328 FSSSKTYDLEVWFAGYGIYREISSCSNLKDFQARRMNIKVKYSQNKKR----ELLHTLNG 383
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKF 451
+ A R AILE +Q E G V IP+ LR++
Sbjct: 384 SGVAVGRTFAAILENYQQEDGSVVIPNSLREY 415
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 534 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
+DD YLI T+E P+ ++RD L E++LP +Y+ S CFR+E + G+ R +
Sbjct: 222 IDDLYLIPTAEVPVTNIYRDDVLEESALPQKYVSYSACFRRESGSYGKDTKGLIRNH 278
>gi|325961721|ref|YP_004239627.1| seryl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323467808|gb|ADX71493.1| seryl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
Length = 427
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 114/199 (57%), Gaps = 13/199 (6%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YL+ TSE + H D L ++ PIRY G S+C+R+E GSHG+DTRGI RVHQF K
Sbjct: 222 DDLYLVGTSEVALAGYHADEILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNK 281
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE F+ T+ +E+ ++ EE A + YRV++ +G L +AA+K D EAW
Sbjct: 282 VEMFIYTTV--EEAAAEHQRLLAWEEEMLAKCELPYRVIDTAAGDLGMSAARKYDCEAWV 339
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVR----------YGQTKQKIYATACATTRVICAILE 188
P GA+REL S SNC +Q+RRL +R G ATTR I A+LE
Sbjct: 340 PTQGAYRELTSTSNCTTFQARRLNIRERAVNPEGVAKGTRAVATLNGTLATTRWIVALLE 399
Query: 189 THQTETG-VRIPDCLRKFV 206
HQ G V +P L+K++
Sbjct: 400 HHQNADGSVNVPKALQKYL 418
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGI RVHQF KVE F+ T+ +E+ ++ EE A + YRV++ +G L
Sbjct: 269 DTRGIIRVHQFNKVEMFIYTTV--EEAAAEHQRLLAWEEEMLAKCELPYRVIDTAAGDLG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQT--KKMNEKIEFVHMLNA 420
+AA+K D EAW P GA+REL S SNC +Q+RRL +R + + + V LN
Sbjct: 327 MSAARKYDCEAWVPTQGAYRELTSTSNCTTFQARRLNIRERAVNPEGVAKGTRAVATLNG 386
Query: 421 TACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
T ATTR I A+LE HQ G V +P L+K++ + V
Sbjct: 387 T-LATTRWIVALLEHHQNADGSVNVPKALQKYLGGLEV 423
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
DD YL+ TSE + H D L ++ PIRY G S+C+R+E
Sbjct: 222 DDLYLVGTSEVALAGYHADEILDFSAGPIRYAGQSSCYRREA 263
>gi|403382912|ref|ZP_10924969.1| SerS [Paenibacillus sp. JC66]
Length = 426
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 118/206 (57%), Gaps = 15/206 (7%)
Query: 20 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKV 79
D YLI T+E P+ HRD L LP Y+ S CFR E G+ GRDTRG+ R HQF KV
Sbjct: 225 DYYLIPTAEVPVTNFHRDEILNGEDLPKYYVAYSACFRSEAGAAGRDTRGLIRQHQFNKV 284
Query: 80 EQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFP 139
E L +P + S+ L+++ +N+E+ LG+ YRVV++ +G L +AAK DLE W P
Sbjct: 285 ELVKLVTP--ESSYDELEKLTENAEKVLQLLGLPYRVVSLCTGDLGFSAAKTYDLEVWLP 342
Query: 140 GSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ-------KIYATACATTRVICAILETHQT 192
S +RE+ SCSN D+Q+RR +R+ + + + + A R + AILE +Q
Sbjct: 343 HSATYREISSCSNFEDFQARRANLRFRREAKAKPEFVHTLNGSGLALGRTVAAILENYQQ 402
Query: 193 ETG-VRIPDCLRKFVPAVYLNEAGEI 217
E G V IPD LR Y+N A I
Sbjct: 403 EDGSVVIPDVLRP-----YMNNAAVI 423
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 295 SEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354
SE A DTRG+ R HQF KVE L +P + S+ L+++ +N+E+ LG+ YRVV
Sbjct: 263 SEAGAAGRDTRGLIRQHQFNKVELVKLVTP--ESSYDELEKLTENAEKVLQLLGLPYRVV 320
Query: 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEF 414
++ +G L +AAK DLE W P S +RE+ SCSN +Q+RR +R+ + K K EF
Sbjct: 321 SLCTGDLGFSAAKTYDLEVWLPHSATYREISSCSNFEDFQARRANLRFRREAKA--KPEF 378
Query: 415 VHMLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
VH LN + A R + AILE +Q E G V IPD LR ++
Sbjct: 379 VHTLNGSGLALGRTVAAILENYQQEDGSVVIPDVLRPYM 417
Score = 43.5 bits (101), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 23/44 (52%)
Query: 536 DKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
D YLI T+E P+ HRD L LP Y+ S CFR E A
Sbjct: 225 DYYLIPTAEVPVTNFHRDEILNGEDLPKYYVAYSACFRSEAGAA 268
>gi|452943569|ref|YP_007499734.1| seryl-tRNA synthetase [Hydrogenobaculum sp. HO]
gi|452881987|gb|AGG14691.1| seryl-tRNA synthetase [Hydrogenobaculum sp. HO]
Length = 421
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 9/200 (4%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLI T+E P+ V +D+ L E LPI + C+R+E GSHG+D +G+ R HQF+K
Sbjct: 224 DDLYLIPTAEVPLVNVFKDTILKEDDLPINLTAYTPCYRREAGSHGKDVKGLIRQHQFDK 283
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VE + P D S+ L++++ N+EE L + YRVV + SG + +A+K D+E W
Sbjct: 284 VELVKIVHP--DNSYDELEKLLSNAEEILQLLELPYRVVALCSGDIGFSASKTYDIEVWI 341
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILETHQT 192
P +RE+ SCSNC D+Q+RR +R+ K + ++ A R + AI+E +QT
Sbjct: 342 PSQNKYREISSCSNCEDFQARRANIRFKDKTGKNRFVHTLNGSSLAVGRTLVAIMENYQT 401
Query: 193 ETG-VRIPDCLRKFVPAVYL 211
+ +RIP L+ ++ Y+
Sbjct: 402 KDNRIRIPKVLKDYIKEEYI 421
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +G+ R HQF+KVE + P D S+ L++++ N+EE L + YRVV + SG +
Sbjct: 271 DVKGLIRQHQFDKVELVKIVHP--DNSYDELEKLLSNAEEILQLLELPYRVVALCSGDIG 328
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+A+K D+E W P +RE+ SCSNC +Q+RR +R+ K K FVH LN ++
Sbjct: 329 FSASKTYDIEVWIPSQNKYREISSCSNCEDFQARRANIRF---KDKTGKNRFVHTLNGSS 385
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457
A R + AI+E +QT+ +RIP L+ ++ Y+
Sbjct: 386 LAVGRTLVAIMENYQTKDNRIRIPKVLKDYIKEEYI 421
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,072,947,218
Number of Sequences: 23463169
Number of extensions: 728418180
Number of successful extensions: 2080346
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6774
Number of HSP's successfully gapped in prelim test: 978
Number of HSP's that attempted gapping in prelim test: 2030586
Number of HSP's gapped (non-prelim): 33141
length of query: 1083
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 930
effective length of database: 8,769,330,510
effective search space: 8155477374300
effective search space used: 8155477374300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 83 (36.6 bits)