BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11602
(1083 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P799|SYSC_RAT Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Sars PE=1
SV=3
Length = 512
Score = 346 bits (887), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 173/253 (68%), Positives = 198/253 (78%), Gaps = 18/253 (7%)
Query: 1 VIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LPI+Y G STCFRQE
Sbjct: 250 VIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHIVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 365 VSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTR ICAILE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +
Sbjct: 425 MLNATMCATTRTICAILENYQTEKGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPS 481
Query: 231 KKQKKQKEGMKKK 243
KKQKKQ EG KKK
Sbjct: 482 KKQKKQHEGSKKK 494
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/198 (69%), Positives = 162/198 (81%), Gaps = 5/198 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGIVVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQNE 500
EG KKK E ++N+
Sbjct: 488 HEGSKKKA--KEVTLENQ 503
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKG-EKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + + L +VIGKG EK DS+ D+KYLIATSEQPI A+HRD WL LP
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDDSS-----YDEKYLIATSEQPIAALHRDEWLRPEDLP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y G STCFRQE
Sbjct: 292 IKYAGFSTCFRQEV 305
>sp|P26638|SYSC_MOUSE Serine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Sars PE=2 SV=3
Length = 512
Score = 345 bits (884), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/252 (67%), Positives = 196/252 (77%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M DEMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +Q E G+ +P+ LR+F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 283 bits (725), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 156/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ DEMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +Q E G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQAEKGIAVPEKLREFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>sp|Q4R4U9|SYSC_MACFA Serine--tRNA ligase, cytoplasmic OS=Macaca fascicularis GN=SARS
PE=2 SV=3
Length = 514
Score = 343 bits (880), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 168/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (721), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>sp|Q9GMB8|SYSC_BOVIN Serine--tRNA ligase, cytoplasmic OS=Bos taurus GN=SARS PE=2 SV=3
Length = 514
Score = 342 bits (876), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK APID+E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGILVPEKLKEFMPP-GLQEL--IPFVKAAPIDQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGILVPEKLKEFMPP-GLQEL--IPFVKAAPIDQEPSKKQKKQ 487
Query: 483 KEGMKKK 489
EG KKK
Sbjct: 488 HEGSKKK 494
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + ++KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYEEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>sp|P49591|SYSC_HUMAN Serine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=SARS PE=1 SV=3
Length = 514
Score = 342 bits (876), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 282 bits (722), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 161/197 (81%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK + ++N
Sbjct: 488 HEGSKKKAAARDVTLEN 504
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>sp|Q5R9K9|SYSC_PONAB Serine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=SARS PE=2 SV=3
Length = 514
Score = 341 bits (875), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 16/252 (6%)
Query: 1 VIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV 60
VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI+Y G+STCFRQEV
Sbjct: 250 VIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEV 305
Query: 61 GSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120
GSHGRDTRGIFRVHQFEK+EQFV +SPHD++SW+M +EMI +EEFY LGI Y +VNIV
Sbjct: 306 GSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIV 365
Query: 121 SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------K 171
SG+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+
Sbjct: 366 SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHM 425
Query: 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETK 231
+ AT CATTR ICAILE +QTE G+ +P+ L++F+P L E IPFVK API++E +K
Sbjct: 426 LNATMCATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSK 482
Query: 232 KQKKQKEGMKKK 243
KQKKQ EG KKK
Sbjct: 483 KQKKQHEGSKKK 494
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/197 (68%), Positives = 162/197 (82%), Gaps = 3/197 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV +SPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ L++F+P + E IPFVK API++E +KKQKKQ
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFMPP-GLQEL--IPFVKPAPIEQEPSKKQKKQ 487
Query: 483 KEGMKKKVLIDEAMIQN 499
EG KKK +A ++N
Sbjct: 488 HEGSKKKAAARDATLEN 504
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 504 IATEKERNNALREVIGKGEKVGDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPI 563
+A + + L +VIGKG + D + D+KYLIATSEQPI A+HRD WL LPI
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDD----NSYDEKYLIATSEQPIAALHRDEWLRPEDLPI 292
Query: 564 RYLGVSTCFRQEC 576
+Y G+STCFRQE
Sbjct: 293 KYAGLSTCFRQEV 305
>sp|Q18678|SYSC_CAEEL Probable serine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=srs-2 PE=3 SV=1
Length = 487
Score = 320 bits (820), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 188/246 (76%), Gaps = 18/246 (7%)
Query: 1 VIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQE 59
V KG ++ GD++ +D+KYLIATSEQPI A HR+ W+ E LPI+Y GVSTCFRQE
Sbjct: 250 VSSKGSEIAGDTS-----VDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTCFRQE 304
Query: 60 VGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNI 119
VGSHGRDTRGIFRVHQFEK+EQFVL SP+D+ESW + DEMI N+E +Y +L I Y+VVNI
Sbjct: 305 VGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNI 364
Query: 120 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ--------- 170
VSG LN+AAAKK DLEAWFPGSGA+RELVSCSNCLDYQSRRL VRYGQTK+
Sbjct: 365 VSGELNNAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEVPFVH 424
Query: 171 KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEET 230
+ AT CATTRVICAILE +QTE G+ +P +++++P Y IPFVK APIDE+
Sbjct: 425 MLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPENYRT---FIPFVKPAPIDEDAK 481
Query: 231 KKQKKQ 236
K K+
Sbjct: 482 KATGKK 487
Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 145/180 (80%), Gaps = 3/180 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFVL SP+D+ESW DEMI N+E +Y +L I Y+VVNIVSG LN
Sbjct: 311 DTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELN 370
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFPGSGA+RELVSCSNCL YQSRRL VRYGQTKK++ ++ FVHMLNAT
Sbjct: 371 NAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEVPFVHMLNATM 430
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTRVICAILE +QTE G+ +P +++++P Y IPFVK APIDE+ K K+
Sbjct: 431 CATTRVICAILENNQTEEGINVPTAIQQWMPENYRT---FIPFVKPAPIDEDAKKATGKK 487
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Query: 504 IATEKERNNALREVIGKGEKV-GDSAPEKDELDDKYLIATSEQPICAVHRDSWLPEASLP 562
+A + ++ L +V KG ++ GD++ +D+KYLIATSEQPI A HR+ W+ E LP
Sbjct: 237 VAQLSQFDDELYKVSSKGSEIAGDTS-----VDEKYLIATSEQPIAAYHRNEWIKETELP 291
Query: 563 IRYLGVSTCFRQEC 576
I+Y GVSTCFRQE
Sbjct: 292 IKYAGVSTCFRQEV 305
>sp|P26636|SYSC_CRIGR Serine--tRNA ligase, cytoplasmic (Fragment) OS=Cricetulus griseus
GN=SARS PE=2 SV=1
Length = 199
Score = 282 bits (721), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DTRGIFRVHQFEK+EQFV TSPHD++SW+ +EMI +EEFY LGI Y +VNIVSG+LN
Sbjct: 5 DTRGIFRVHQFEKIEQFVYTSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNIVSGSLN 64
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
HAA+KKLDLEAWFPGSGAFRELVSCSNC YQ+RRL +RYGQTKKM +K+EFVHMLNAT
Sbjct: 65 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 124
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQ 482
CATTR ICAILE +QTE G+ +P+ LR+F+P + E IPFVK APID+E +KKQKKQ
Sbjct: 125 CATTRTICAILENYQTEKGIIVPEKLREFMPPG-LQEL--IPFVKPAPIDQEPSKKQKKQ 181
Query: 483 KEGMKKK 489
EG KK+
Sbjct: 182 HEGSKKE 188
Score = 266 bits (681), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/190 (68%), Positives = 152/190 (80%), Gaps = 12/190 (6%)
Query: 63 HGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSG 122
HGRDTRGIFRVHQFEK+EQFV TSPHD++SW+M +EMI +EEFY LGI Y +VNIVSG
Sbjct: 2 HGRDTRGIFRVHQFEKIEQFVYTSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNIVSG 61
Query: 123 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---------KIY 173
+LNHAA+KKLDLEAWFPGSGAFRELVSCSNC DYQ+RRL +RYGQTK+ +
Sbjct: 62 SLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLN 121
Query: 174 ATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQ 233
AT CATTR ICAILE +QTE G+ +P+ LR+F+P L E IPFVK APID+E +KKQ
Sbjct: 122 ATMCATTRTICAILENYQTEKGIIVPEKLREFMPPG-LQEL--IPFVKPAPIDQEPSKKQ 178
Query: 234 KKQKEGMKKK 243
KKQ EG KK+
Sbjct: 179 KKQHEGSKKE 188
>sp|Q39230|SYS_ARATH Serine--tRNA ligase OS=Arabidopsis thaliana GN=At5g27470 PE=2 SV=1
Length = 451
Score = 263 bits (673), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 163/229 (71%), Gaps = 18/229 (7%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 229 EGDDKYLIATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 288
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQF +T P+++ SW+MLDEM++NSE+FY L + Y++V+IVSGALN AAAKK DLEA
Sbjct: 289 EKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEA 348
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYG------QTKQKIY---ATACATTRVICAIL 187
WFP S FRELVSCSNC DYQ+RRL +RYG QTKQ ++ +T AT R IC IL
Sbjct: 349 WFPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCIL 408
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGE--IPFVKTAPIDEEETKKQK 234
E +Q E GV IP+ L+ F+ GE +PF + + + KK K
Sbjct: 409 ENYQREDGVDIPEVLQPFM-------GGETFLPFKAKPVVADTKGKKSK 450
Score = 202 bits (515), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 9/180 (5%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P+++ SW+ LDEM++NSE+FY L + Y++V+IVSGALN
Sbjct: 278 DTLGIFRVHQFEKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S FRELVSCSNC YQ+RRL +RYGQ K + ++VHMLN+T
Sbjct: 338 DAAAKKYDLEAWFPSSETFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGE--IPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E GV IP+ L+ F+ GE +PF + + + KK K
Sbjct: 398 TATERTICCILENYQREDGVDIPEVLQPFM-------GGETFLPFKAKPVVADTKGKKSK 450
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 533 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E
Sbjct: 229 EGDDKYLIATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEA 272
>sp|Q7KWQ2|SYSC_DICDI Serine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum
GN=serS PE=1 SV=1
Length = 451
Score = 260 bits (664), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 128/215 (59%), Positives = 155/215 (72%), Gaps = 17/215 (7%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
++KYLIATSEQPI A H+D W+ E LP +Y+G STCFR+E GSHGRDT GIFRVHQFEK
Sbjct: 229 EEKYLIATSEQPISAFHQDEWIEEKDLPKKYVGYSTCFRKEAGSHGRDTWGIFRVHQFEK 288
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQF +T P ++SW M++EMI NSE+FY +LGI YRVVNIVSGALN+AA+KK DLE WF
Sbjct: 289 IEQFCITEP--EKSWDMMEEMINNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWF 346
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK---------QKIYATACATTRVICAILET 189
PG +RELVSCSNC DYQSR L +R G K + +T ATTRVIC ILE
Sbjct: 347 PGYNQYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILEN 406
Query: 190 HQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
+QTE G+ +P LR ++ + IPFVK AP
Sbjct: 407 YQTEGGITVPVPLRPYLGKDF------IPFVKAAP 435
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 124/168 (73%), Gaps = 8/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEK+EQF +T P ++SW ++EMI NSE+FY +LGI YRVVNIVSGALN
Sbjct: 276 DTWGIFRVHQFEKIEQFCITEP--EKSWDMMEEMINNSEQFYQELGIPYRVVNIVSGALN 333
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AA+KK DLE WFPG +RELVSCSNC YQSR L +R G K+ ++ ++VHMLN+T
Sbjct: 334 NAASKKYDLEGWFPGYNQYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTL 393
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
ATTRVIC ILE +QTE G+ +P LR ++ + IPFVK AP
Sbjct: 394 AATTRVICCILENYQTEGGITVPVPLRPYLGKDF------IPFVKAAP 435
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
++KYLIATSEQPI A H+D W+ E LP +Y+G STCFR+E +
Sbjct: 229 EEKYLIATSEQPISAFHQDEWIEEKDLPKKYVGYSTCFRKEAGS 272
>sp|O81983|SYS_HELAN Serine--tRNA ligase OS=Helianthus annuus PE=2 SV=1
Length = 438
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 147/199 (73%), Gaps = 9/199 (4%)
Query: 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
E DDKYLIAT+EQP+CA H D W+ LP+RY G S+CFR+E GSHGRDT GIFRVHQF
Sbjct: 226 EGDDKYLIATAEQPLCAYHIDDWIHPNELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQF 285
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EKVEQF LT P ++SW+M +EMI+NSEEFY L + Y+VV+IVSGALN AAAKK DLEA
Sbjct: 286 EKVEQFCLTKPSGNDSWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALNDAAAKKYDLEA 345
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVICAIL 187
WFP S +RELVSCSNC DYQSR+L +R GQ K + +T AT R +C IL
Sbjct: 346 WFPASKTYRELVSCSNCTDYQSRKLEIRCGQKKGNEQAKQYCHLLNSTLTATERTLCCIL 405
Query: 188 ETHQTETGVRIPDCLRKFV 206
E +QTE GV IP+ L+ F+
Sbjct: 406 ENYQTEKGVAIPEVLQPFM 424
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 113/150 (75%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF LT P ++SW+ +EMI+NSEEFY L + Y+VV+IVSGALN
Sbjct: 275 DTLGIFRVHQFEKVEQFCLTKPSGNDSWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALN 334
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAAKK DLEAWFP S +RELVSCSNC YQSR+L +R GQ K + ++ H+LN+T
Sbjct: 335 DAAAKKYDLEAWFPASKTYRELVSCSNCTDYQSRKLEIRCGQKKGNEQAKQYCHLLNSTL 394
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452
AT R +C ILE +QTE GV IP+ L+ F+
Sbjct: 395 TATERTLCCILENYQTEKGVAIPEVLQPFM 424
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Query: 490 VLIDEAMIQNEKDLIATEKERNNAL-------REVIGKGEKVGDSAPE----KDELDDKY 538
V +++A+I D + EK + AL ++++GK ++ E E DDKY
Sbjct: 174 VRLNQALINFGLDFL--EKRKYTALQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKY 231
Query: 539 LIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
LIAT+EQP+CA H D W+ LP+RY G S+CFR+E +
Sbjct: 232 LIATAEQPLCAYHIDDWIHPNELPLRYAGYSSCFRKEAGS 271
>sp|Q9HGT6|SYSC_CANAL Serine--tRNA ligase, cytoplasmic OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=SES1 PE=1 SV=1
Length = 462
Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 150/230 (65%), Gaps = 17/230 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E GSHG+D GIFRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK---------IYATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G +Q + +T AT R IC
Sbjct: 354 LEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTIC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234
ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 414 CILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ D MI SEEFY LG+ YRVV IVSG LN
Sbjct: 288 DAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G ++ ++ ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQK 480
AT R IC ILE +Q E G+ IP+ LRK++P E IP++K P + KK K
Sbjct: 406 SATERTICCILENYQKEDGLVIPEVLRKYIPG----EPEFIPYIKELPKNTTSVKKAK 459
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P LP+RY G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGS 284
>sp|P07284|SYSC_YEAST Serine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SES1 PE=1 SV=2
Length = 462
Score = 233 bits (594), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 148/220 (67%), Gaps = 17/220 (7%)
Query: 16 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRV 73
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E GSHG+D G+FRV
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRV 295
Query: 74 HQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLD 133
H FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN+AAAKK D
Sbjct: 296 HAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYD 353
Query: 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVIC 184
LEAWFP ++ELVSCSNC DYQSR L +R G K +K Y +T AT R +C
Sbjct: 354 LEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALC 413
Query: 185 AILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 414 CILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 115/168 (68%), Gaps = 6/168 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVH FEK+EQFV+T P ++SW+ ++MI SEEFY L + YR+V IVSG LN
Sbjct: 288 DAWGVFRVHAFEKIEQFVITEP--EKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELN 345
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 346 NAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTL 405
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
AT R +C ILE +QTE G+ +P+ LRK++P E +PFV P
Sbjct: 406 AATQRALCCILENYQTEDGLVVPEVLRKYIPG----EPEFLPFVNELP 449
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 532 DELDDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA 578
D D+KYLIATSEQPI A H W P+ LPI Y+G S+CFR+E +
Sbjct: 236 DGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGS 284
>sp|O14018|SYSC_SCHPO Serine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC29A4.15 PE=3 SV=1
Length = 450
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 144/217 (66%), Gaps = 18/217 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQF 76
+++YLIATSEQPI A H W P LP++Y G STC+R+E GSHGRD GIFRVH F
Sbjct: 231 EERYLIATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAF 290
Query: 77 EKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEA 136
EK+EQFVLT P ++SW+ EMI ++E+FY L + YR+V IVSGALN+AAAKK DLEA
Sbjct: 291 EKIEQFVLTDP--EKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEA 348
Query: 137 WFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK----QKIY-----ATACATTRVICAIL 187
WFP G ++ELVSCSNC DYQSR L +R G K +K Y +T CAT R +C IL
Sbjct: 349 WFPFQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCIL 408
Query: 188 ETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAP 224
E +QT GV +P L+ Y+ +PF K P
Sbjct: 409 ENYQTPDGVNVPKVLQP-----YMGGKTFLPFTKELP 440
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 113/168 (67%), Gaps = 7/168 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D GIFRVH FEK+EQFVLT P ++SW+ EMI ++E+FY L + YR+V IVSGALN
Sbjct: 280 DAWGIFRVHAFEKIEQFVLTDP--EKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALN 337
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAAKK DLEAWFP G ++ELVSCSNC YQSR L +R G K + + ++VH LN+T
Sbjct: 338 NAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTL 397
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAP 470
CAT R +C ILE +QT GV +P L+ Y+ +PF K P
Sbjct: 398 CATERALCCILENYQTPDGVNVPKVLQP-----YMGGKTFLPFTKELP 440
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 18/97 (18%)
Query: 535 DDKYLIATSEQPICAVHRDSWL--PEASLPIRYLGVSTCFRQECDA------GMCRTY-- 584
+++YLIATSEQPI A H W P LP++Y G STC+R+E + G+ R +
Sbjct: 231 EERYLIATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAF 290
Query: 585 -----FHVTCAQREGLLSEATSEEVDQADPFYAHCRL 616
F +T ++ EA +E ++ A+ FY L
Sbjct: 291 EKIEQFVLTDPEKSW---EAFTEMINHAEDFYKSLEL 324
>sp|B1L5G0|SYS_KORCO Serine--tRNA ligase OS=Korarchaeum cryptofilum (strain OPF8)
GN=serS PE=3 SV=1
Length = 456
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 136/198 (68%), Gaps = 8/198 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE P+ A+H E LP Y+G+S CFR+E G+HG+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIATSEHPLVAMHAGDTFTEDELPRLYVGLSPCFRKEAGTHGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQ V + P + + W + +I+N+EE Y +L I YR+VNI SG L +AAKK DL
Sbjct: 301 QFTKVEQIVFSKPEESKYWH--ERLIENAEEIYRELEIPYRIVNIASGDLGASAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-----IYATACATTRVICAILET 189
E WFP G +RELVSCSNC+D+QS RL ++ + ++ + +TA ATTR I AI+E
Sbjct: 359 EGWFPAQGKYRELVSCSNCVDWQSYRLRIKLDRKGRREFVHTLNSTALATTRTISAIVEN 418
Query: 190 HQTETG-VRIPDCLRKFV 206
HQ E G VRIP LRK++
Sbjct: 419 HQREDGSVRIPKALRKYL 436
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 105/151 (69%), Gaps = 7/151 (4%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF KVEQ V + P + + W + +I+N+EE Y +L I YR+VNI SG L
Sbjct: 292 DTKGIFRVHQFTKVEQIVFSKPEESKYWH--ERLIENAEEIYRELEIPYRIVNIASGDLG 349
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AAKK DLE WFP G +RELVSCSNC+ +QS RL ++ + + EFVH LN+TA
Sbjct: 350 ASAAKKYDLEGWFPAQGKYRELVSCSNCVDWQSYRLRIKLDRKGRR----EFVHTLNSTA 405
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTR I AI+E HQ E G VRIP LRK++
Sbjct: 406 LATTRTISAIVENHQREDGSVRIPKALRKYL 436
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLIATSE P+ A+H E LP Y+G+S CFR+E
Sbjct: 241 KVEGEDLYLIATSEHPLVAMHAGDTFTEDELPRLYVGLSPCFRKEA 286
>sp|Q979Z3|SYS_THEVO Serine--tRNA ligase OS=Thermoplasma volcanium (strain ATCC 51530 /
DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=serS PE=3
SV=1
Length = 441
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 136/204 (66%), Gaps = 7/204 (3%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE I ++ + +L E LPIR GVS CFR+E G+HG+DT+GIFRVH
Sbjct: 239 KIEDEDLYLIATSEHSIASMLSNEFLEEKELPIRVAGVSACFRREAGAHGKDTKGIFRVH 298
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQF+ P D SW L+E++ N+EE Y LGI YRVVN+ SG L AAKK D+
Sbjct: 299 QFNKIEQFIFCKPED--SWDYLEEILSNAEEIYRSLGIPYRVVNVCSGELGRLAAKKYDI 356
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILET 189
EAWFP G FRE+VS SN DYQ+R L ++Y ++ + +TA ATTR++ AI+E
Sbjct: 357 EAWFPAQGKFREIVSASNDTDYQARSLNIKYRKSGGNEFVHTLNSTAIATTRILVAIMEN 416
Query: 190 HQTETGVRIPDCLRKFVPAVYLNE 213
Q + +RIPD L + Y+++
Sbjct: 417 FQEDGRIRIPDVLVPYTGFQYIDK 440
Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF K+EQF+ P D SW L+E++ N+EE Y LGI YRVVN+ SG L
Sbjct: 290 DTKGIFRVHQFNKIEQFIFCKPED--SWDYLEEILSNAEEIYRSLGIPYRVVNVCSGELG 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+EAWFP G FRE+VS SN YQ+R L ++Y ++ EFVH LN+TA
Sbjct: 348 RLAAKKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKYRKSGGN----EFVHTLNSTA 403
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNE 459
ATTR++ AI+E Q + +RIPD L + Y+++
Sbjct: 404 IATTRILVAIMENFQEDGRIRIPDVLVPYTGFQYIDK 440
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLIATSE I ++ + +L E LPIR GVS CFR+E A
Sbjct: 239 KIEDEDLYLIATSEHSIASMLSNEFLEEKELPIRVAGVSACFRREAGA 286
>sp|Q2NEU9|SYS_METST Serine--tRNA ligase OS=Methanosphaera stadtmanae (strain DSM 3091)
GN=serS PE=3 SV=1
Length = 424
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+EQ + A+HR+ + LP+RY +STCFR+E GSHG+DT GIFRVH
Sbjct: 218 KVENEDLYLIATAEQTLAALHRNEIIDSEDLPLRYCALSTCFRKEAGSHGKDTLGIFRVH 277
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QFEKVEQF+ +P + S +++++ +E Y LG+ Y++V IVS ALN AA K DL
Sbjct: 278 QFEKVEQFIYATPEN--STLEHEKLLEVTEGIYQKLGLPYQIVAIVSSALNDNAAIKYDL 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-------QTKQKIYATACATTRVICAIL 187
EAWFPGSG +RELVSC+NC DYQ+R++ RYG Q + +TA AT R IC IL
Sbjct: 336 EAWFPGSGTYRELVSCTNCKDYQARKINTRYGKAGAGDAQILHTLNSTAIATERTICCIL 395
Query: 188 ETHQTETG-VRIPDCLRKFVPAVYLNEA 214
E +Q E G ++IPD L ++ + EA
Sbjct: 396 ENYQQEDGSIKIPDVLIPYMNGKTIIEA 423
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 108/159 (67%), Gaps = 5/159 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT GIFRVHQFEKVEQF+ +P + S +++++ +E Y LG+ Y++V IVS ALN
Sbjct: 269 DTLGIFRVHQFEKVEQFIYATPEN--STLEHEKLLEVTEGIYQKLGLPYQIVAIVSSALN 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AA K DLEAWFPGSG +RELVSC+NC YQ+R++ RYG+ + +I +H LN+TA
Sbjct: 327 DNAAIKYDLEAWFPGSGTYRELVSCTNCKDYQARKINTRYGKAGAGDAQI--LHTLNSTA 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEA 460
AT R IC ILE +Q E G ++IPD L ++ + EA
Sbjct: 385 IATERTICCILENYQQEDGSIKIPDVLIPYMNGKTIIEA 423
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLIAT+EQ + A+HR+ + LP+RY +STCFR+E
Sbjct: 218 KVENEDLYLIATAEQTLAALHRNEIIDSEDLPLRYCALSTCFRKEA 263
>sp|Q8SS48|SYS_ENCCU Serine--tRNA ligase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=ECU04_0750 PE=1 SV=1
Length = 429
Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 132/195 (67%), Gaps = 10/195 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLIATSEQ + A++ D + +P ++ G S CFR+E G+HG+D G+FRVHQFEK
Sbjct: 227 DDLYLIATSEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGAHGKDNAGLFRVHQFEK 286
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV+ P +ES K +EMI+ EEFY L I+Y VV IVSG LN AAA K DLEA+F
Sbjct: 287 IEQFVICGP--EESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELNDAAAIKYDLEAYF 344
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQ---KIY-----ATACATTRVICAILETH 190
P + +RELVSCSNC DYQSR L +RYG K+ KIY T CA R +C I+E +
Sbjct: 345 PSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNRKIYVHLLNGTMCAVQRALCCIVENY 404
Query: 191 QTETGVRIPDCLRKF 205
QT G+ IPD L+ +
Sbjct: 405 QTGDGIAIPDVLQGY 419
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 105/149 (70%), Gaps = 3/149 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D G+FRVHQFEK+EQFV+ P +ES K +EMI+ EEFY L I+Y VV IVSG LN
Sbjct: 274 DNAGLFRVHQFEKIEQFVICGP--EESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELN 331
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAA K DLEA+FP + +RELVSCSNC YQSR L +RYG K+ N KI +VH+LN T
Sbjct: 332 DAAAIKYDLEAYFPSAEKYRELVSCSNCTDYQSRELEIRYGVVKENNRKI-YVHLLNGTM 390
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKF 451
CA R +C I+E +QT G+ IPD L+ +
Sbjct: 391 CAVQRALCCIVENYQTGDGIAIPDVLQGY 419
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
DD YLIATSEQ + A++ D + +P ++ G S CFR+E A
Sbjct: 227 DDLYLIATSEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGA 270
>sp|Q970Y4|SYS_SULTO Serine--tRNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=serS PE=3 SV=1
Length = 453
Score = 206 bits (525), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 137/199 (68%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E PI A++ +P+ LP++Y+G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHPIAALYFKEEIPKEKLPLKYVGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ +SP D SWK+ +E+I+N+EE + LG+ YRV+NI +G L AAKK DL
Sbjct: 301 QFHKVEQFIFSSPED--SWKLHEELIRNAEEIFQGLGLPYRVINIATGDLGACAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P FRE+VSCSNCLD+Q+ R+ +RY + K + +TA A+TR I AILE
Sbjct: 359 EVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEKGGKKGYVHTLNSTAIASTRTITAILE 418
Query: 189 THQTETG-VRIPDCLRKFV 206
+Q E G V IP L+K++
Sbjct: 419 NYQREDGVVEIPKVLKKYL 437
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 106/154 (68%), Gaps = 6/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ +SP D SWK +E+I+N+EE + LG+ YRV+NI +G
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSSPED--SWKLHEELIRNAEEIFQGLGLPYRVINIATG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNCL +Q+ R+ +RY + K +VH LN
Sbjct: 347 DLGACAAKKYDLEVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEK---GGKKGYVHTLN 403
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V IP L+K++
Sbjct: 404 STAIASTRTITAILENYQREDGVVEIPKVLKKYL 437
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E PI A++ +P+ LP++Y+G+S FR+E A G+ R +
Sbjct: 241 KIENEDLYLIATAEHPIAALYFKEEIPKEKLPLKYVGISPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>sp|Q9HKX5|SYS_THEAC Serine--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC 25905
/ DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=serS
PE=3 SV=1
Length = 441
Score = 206 bits (524), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 132/202 (65%), Gaps = 7/202 (3%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE I A+ + +L E LP+R G+S CFR+E G+HG+DT+GIFRVH
Sbjct: 239 KIEGEDLYLIATSEHSIAAMLSNQFLEEKDLPLRVAGISACFRREAGAHGKDTKGIFRVH 298
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQFV P D SW L+E++ N+E Y LGI YRVVN+ SG L AAKK D+
Sbjct: 299 QFNKIEQFVFCKPED--SWDFLEEILGNAEAIYRSLGIPYRVVNVCSGELGRLAAKKYDI 356
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-----QKIYATACATTRVICAILET 189
EAWFP G FRE+VS SN DYQ+R L ++Y ++ + +TA ATTR++ AI+E
Sbjct: 357 EAWFPAQGKFREIVSASNDTDYQARSLNIKYRTSEGNRFVHTLNSTAIATTRILVAIMEN 416
Query: 190 HQTETGVRIPDCLRKFVPAVYL 211
Q +RIPD L + Y+
Sbjct: 417 FQEGDRIRIPDVLVPYTGFQYI 438
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 101/155 (65%), Gaps = 6/155 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF K+EQFV P D SW L+E++ N+E Y LGI YRVVN+ SG L
Sbjct: 290 DTKGIFRVHQFNKIEQFVFCKPED--SWDFLEEILGNAEAIYRSLGIPYRVVNVCSGELG 347
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK D+EAWFP G FRE+VS SN YQ+R L ++Y + +E FVH LN+TA
Sbjct: 348 RLAAKKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKY----RTSEGNRFVHTLNSTA 403
Query: 423 CATTRVICAILETHQTETGVRIPDCLRKFVPAVYV 457
ATTR++ AI+E Q +RIPD L + Y+
Sbjct: 404 IATTRILVAIMENFQEGDRIRIPDVLVPYTGFQYI 438
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLIATSE I A+ + +L E LP+R G+S CFR+E A
Sbjct: 239 KIEGEDLYLIATSEHSIAAMLSNQFLEEKDLPLRVAGISACFRREAGA 286
>sp|O28244|SYS_ARCFU Serine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558 /
VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=serS PE=3
SV=1
Length = 453
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 136/204 (66%), Gaps = 11/204 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE PI A+H L E LP+ Y GVS CFR+E G+HG+DT+GIFRVH
Sbjct: 238 KVEDEDLYLIATSEHPIAAMHMREVLEERELPLLYAGVSPCFRKEAGAHGKDTKGIFRVH 297
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P ++SW+ +++I+N E+ + LGI YR+VNI +G L AAKK DL
Sbjct: 298 QFNKVEQFVFCLP--EQSWEWHEKLIENVEKLWQGLGIPYRIVNICTGDLGIVAAKKYDL 355
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK--------IYATACATTRVICAI 186
EAW P +RE+VSCSNC D+QS RL +R+ + + K + +TA ATTR I AI
Sbjct: 356 EAWMPAQAKYREMVSCSNCTDWQSYRLDIRFAEERGKPSKGFVHTLNSTAIATTRAITAI 415
Query: 187 LETHQTETG-VRIPDCLRKFVPAV 209
+E Q E G V IP LRK++ +
Sbjct: 416 IENFQLEDGRVEIPRVLRKYLEPI 439
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 104/154 (67%), Gaps = 4/154 (2%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF KVEQFV P ++SW+ +++I+N E+ + LGI YR+VNI +G L
Sbjct: 289 DTKGIFRVHQFNKVEQFVFCLP--EQSWEWHEKLIENVEKLWQGLGIPYRIVNICTGDLG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLEAW P +RE+VSCSNC +QS RL +R+ + + K FVH LN+TA
Sbjct: 347 IVAAKKYDLEAWMPAQAKYREMVSCSNCTDWQSYRLDIRFAEERGKPSK-GFVHTLNSTA 405
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAV 455
ATTR I AI+E Q E G V IP LRK++ +
Sbjct: 406 IATTRAITAIIENFQLEDGRVEIPRVLRKYLEPI 439
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 31/48 (64%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D YLIATSE PI A+H L E LP+ Y GVS CFR+E A
Sbjct: 238 KVEDEDLYLIATSEHPIAAMHMREVLEERELPLLYAGVSPCFRKEAGA 285
>sp|Q6KZN5|SYS_PICTO Serine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027 /
DSM 9790 / JCM 10055 / NBRC 100828) GN=serS PE=3 SV=1
Length = 444
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 135/208 (64%), Gaps = 12/208 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIAT+E PI ++ +D L E LPIR GVS CFR+E G+HG+DT+GIFRVH
Sbjct: 238 KIEGDDLYLIATAEHPIASMLQDEILMEDELPIRVSGVSPCFRREAGAHGKDTKGIFRVH 297
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQFV P D SW DE+++NSE+ Y L I YRVVN+ SG L + AAKK D+
Sbjct: 298 QFNKIEQFVFCKPED--SWDFFDELVRNSEDIYKSLKIPYRVVNVCSGELGNLAAKKYDI 355
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-----GQTKQKIYATACATTRVICAILET 189
EAWFP G FRE+VS SN DYQ+R L ++Y + + +TA AT R++ AI+E
Sbjct: 356 EAWFPAQGKFREIVSASNDTDYQARSLNIKYRSRDGNRFVHTLNSTAIATERILVAIMEN 415
Query: 190 HQTETG--VRIPDCLRKFVPAVYLNEAG 215
Q G ++IP+ L +P +E G
Sbjct: 416 FQDRNGKVIKIPEVL---IPYTGFSEIG 440
Score = 157 bits (396), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 105/161 (65%), Gaps = 11/161 (6%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
DT+GIFRVHQF K+EQFV P D SW DE+++NSE+ Y L I YRVVN+ SG L
Sbjct: 289 DTKGIFRVHQFNKIEQFVFCKPED--SWDFFDELVRNSEDIYKSLKIPYRVVNVCSGELG 346
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+ AAKK D+EAWFP G FRE+VS SN YQ+R L ++Y +++ N FVH LN+TA
Sbjct: 347 NLAAKKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKY-RSRDGN---RFVHTLNSTA 402
Query: 423 CATTRVICAILETHQTETG--VRIPDCLRKFVPAVYVNEAG 461
AT R++ AI+E Q G ++IP+ L +P +E G
Sbjct: 403 IATERILVAIMENFQDRNGKVIKIPEVL---IPYTGFSEIG 440
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E DD YLIAT+E PI ++ +D L E LPIR GVS CFR+E A
Sbjct: 238 KIEGDDLYLIATAEHPIASMLQDEILMEDELPIRVSGVSPCFRREAGA 285
>sp|Q4J8I4|SYS_SULAC Serine--tRNA ligase OS=Sulfolobus acidocaldarius (strain ATCC 33909
/ DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=serS
PE=3 SV=1
Length = 458
Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 133/199 (66%), Gaps = 9/199 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A++ +P+ LP++ +GVS FR+E G+ +D +GIFRVH
Sbjct: 241 KIEGEDLYLIATAEHSIAALYYKEEIPKEELPLKLVGVSPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ +SP D SWK +EMI+N+EE + LG+ YRV+NI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSSPED--SWKYHEEMIENAEEIFRGLGLPYRVINIASGDLGAPAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------IYATACATTRVICAILE 188
E W P FRE+VSCSNCLD+Q+ R+ +RY + K + +TA A+TR I AILE
Sbjct: 359 EVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEKNNKKGYLHTLNSTAIASTRAITAILE 418
Query: 189 THQTETG-VRIPDCLRKFV 206
Q E G V +P LRK++
Sbjct: 419 NFQKEDGVVEVPKVLRKYL 437
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 106/154 (68%), Gaps = 6/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ +SP D SWK +EMI+N+EE + LG+ YRV+NI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSSPED--SWKYHEEMIENAEEIFRGLGLPYRVINIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNCL +Q+ R+ +RY + N K ++H LN
Sbjct: 347 DLGAPAAKKYDLEVWMPAQAKFREMVSCSNCLDWQAYRMRIRYVEK---NNKKGYLHTLN 403
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE Q E G V +P LRK++
Sbjct: 404 STAIASTRAITAILENFQKEDGVVEVPKVLRKYL 437
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E I A++ +P+ LP++ +GVS FR+E A G+ R +
Sbjct: 241 KIEGEDLYLIATAEHSIAALYYKEEIPKEELPLKLVGVSPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>sp|O58441|SYS_PYRHO Serine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=serS PE=1
SV=2
Length = 455
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 139/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++I+N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGKFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQ E G VRIP L K+
Sbjct: 419 ENHQEEDGTVRIPKVLWKY 437
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++I+N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKIIRNAEELFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + +EK +VH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQ E G VRIP L K+
Sbjct: 405 STAIATSRAIVAILENHQEEDGTVRIPKVLWKY 437
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 241 KVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 286
>sp|B6YWW5|SYS_THEON Serine--tRNA ligase OS=Thermococcus onnurineus (strain NA1) GN=serS
PE=3 SV=1
Length = 457
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 139/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+G+S CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILEGKDLPLLYVGISPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++IQN+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKLIQNAEEIFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC ++Q+RRL +RY +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTEWQARRLNIRYRDKTHEKPKFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQTE G V++P L K+
Sbjct: 419 ENHQTEEGVVKLPKVLWKY 437
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 111/153 (72%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++IQN+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKLIQNAEEIFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +RY K +EK +FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRY--RDKTHEKPKFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENHQTEEGVVKLPKVLWKY 437
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+G+S CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILEGKDLPLLYVGISPCFRKEA 286
>sp|A8AB67|SYS_IGNH4 Serine--tRNA ligase OS=Ignicoccus hospitalis (strain KIN4/I / DSM
18386 / JCM 14125) GN=serS PE=3 SV=1
Length = 458
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 132/200 (66%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIATSE P+ A + + E+ LPI+ GVS CFR+E G+ RD +GIFRVH
Sbjct: 244 KIEGEDLYLIATSEHPLAAYKMEEIIDESELPIKLAGVSPCFRKEAGAGNRDLKGIFRVH 303
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P D SW++L+E+I+N+EE L + YRVVN+ G L AAKK DL
Sbjct: 304 QFHKVEQFVFSKPED--SWEVLEELIRNAEELVKGLELPYRVVNVCGGELGSPAAKKYDL 361
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY---GQTK----QKIYATACATTRVICAIL 187
E W+P G +RELVS SNC D+QS RL +RY G K + +TA ATTR I AIL
Sbjct: 362 EVWYPAQGKYRELVSASNCTDWQSYRLKIRYRIKGGKKHDFVHTLNSTALATTRTITAIL 421
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E HQ G VRIP LRK++
Sbjct: 422 ENHQLPDGRVRIPRALRKYL 441
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 127/217 (58%), Gaps = 29/217 (13%)
Query: 260 RGIFRVHQFE----KVE----QFVLTSPHDDESWKMLDEMIQNSE--------------- 296
RG+ V F+ K+E + TS H ++KM +E+I SE
Sbjct: 230 RGVIDVETFKDAIYKIEGEDLYLIATSEHPLAAYKM-EEIIDESELPIKLAGVSPCFRKE 288
Query: 297 EFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNI 356
+ D +GIFRVHQF KVEQFV + P D SW+ L+E+I+N+EE L + YRVVN+
Sbjct: 289 AGAGNRDLKGIFRVHQFHKVEQFVFSKPED--SWEVLEELIRNAEELVKGLELPYRVVNV 346
Query: 357 VSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVH 416
G L AAKK DLE W+P G +RELVS SNC +QS RL +RY K +K +FVH
Sbjct: 347 CGGELGSPAAKKYDLEVWYPAQGKYRELVSASNCTDWQSYRLKIRY--RIKGGKKHDFVH 404
Query: 417 MLNATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
LN+TA ATTR I AILE HQ G VRIP LRK++
Sbjct: 405 TLNSTALATTRTITAILENHQLPDGRVRIPRALRKYL 441
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIATSE P+ A + + E+ LPI+ GVS CFR+E AG
Sbjct: 244 KIEGEDLYLIATSEHPLAAYKMEEIIDESELPIKLAGVSPCFRKEAGAG 292
>sp|C5A226|SYS_THEGJ Serine--tRNA ligase OS=Thermococcus gammatolerans (strain DSM 15229
/ JCM 11827 / EJ3) GN=serS PE=3 SV=1
Length = 455
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 138/199 (69%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ +++I N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHEKIIANAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTDWQARRLNIRFRDKTHEKPKFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQTE G V++P L K+
Sbjct: 419 ENHQTEEGVVKLPKALWKY 437
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ +++I N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKIIANAEELFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +R+ K +EK +FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF--RDKTHEKPKFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 286
>sp|Q9UZ21|SYS_PYRAB Serine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=serS PE=3 SV=1
Length = 455
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 137/199 (68%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+G+S CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ + +I+N+EE + L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHERIIRNAEELFQKLEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQ E G V+IP L K+
Sbjct: 419 ENHQEEDGTVKIPKVLWKY 437
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 108/153 (70%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ + +I+N+EE + L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHERIIRNAEELFQKLEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + +EK +VH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQ E G V+IP L K+
Sbjct: 405 STAIATSRAIVAILENHQEEDGTVKIPKVLWKY 437
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+G+S CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISPCFRKEA 286
>sp|Q5JE75|SYS_PYRKO Serine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=serS PE=3 SV=1
Length = 455
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 136/199 (68%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ + +I N+EE + L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHERIIANAEEIFQALEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW G G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMAGQGKFREVVSASNCTDWQARRLNIRFRDKTHEKPRFVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQTE G V++P L K+
Sbjct: 419 ENHQTEEGVVKLPKALWKY 437
Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 107/153 (69%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ + +I N+EE + L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHERIIANAEEIFQALEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW G G FRE+VS SNC +Q+RRL +R+ K +EK FVH LN
Sbjct: 347 DLGYVAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF--RDKTHEKPRFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQTE G V++P L K+
Sbjct: 405 STAIATSRAIVAILENHQTEEGVVKLPKALWKY 437
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+GVS CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEA 286
>sp|Q8U1K2|SYS_PYRFU Serine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM
3638 / JCM 8422 / Vc1) GN=serS PE=3 SV=1
Length = 455
Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 136/199 (68%), Gaps = 10/199 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI T+E P+ +H + L LP+ Y+ S CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVAFSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV + P +ESW+ + +++N+EE + +L I YRVVNI +G L + AAKK D+
Sbjct: 301 QFHKVEQFVYSRP--EESWEWHERLVRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-GQTKQK------IYATACATTRVICAIL 187
EAW PG G FRE+VS SNC D+Q+RRL +R+ +T +K + +TA AT+R I AIL
Sbjct: 359 EAWMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAIL 418
Query: 188 ETHQTETG-VRIPDCLRKF 205
E HQ E G V+IP L K+
Sbjct: 419 ENHQQEDGTVKIPRALWKY 437
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 109/153 (71%), Gaps = 5/153 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV + P +ESW+ + +++N+EE + +L I YRVVNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHERLVRNAEELFQELEIPYRVVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L + AAKK D+EAW PG G FRE+VS SNC +Q+RRL +R+ + +EK +VH LN
Sbjct: 347 DLGYVAAKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKF 451
+TA AT+R I AILE HQ E G V+IP L K+
Sbjct: 405 STAIATSRAIVAILENHQQEDGTVKIPRALWKY 437
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI T+E P+ +H + L LP+ Y+ S CFR+E
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVAFSPCFRKEA 286
>sp|A2SRC6|SYS_METLZ Serine--tRNA ligase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=serS PE=3 SV=1
Length = 425
Score = 196 bits (499), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 11/201 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIAT+E P+ A+++D E LP++ +G+S CFR+E+G+HG D+RG+FRVH
Sbjct: 221 KIEDDDAYLIATAEHPMAAMYQDEIFEEKDLPLKMVGISPCFRREIGAHGLDSRGLFRVH 280
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQF+ P ++SW+M +E++ N+EE + LG+ YRVVNI +G + AAKK D+
Sbjct: 281 QFTKIEQFIYCMP--EKSWEMHEELLANAEEIFTKLGLPYRVVNICTGDIGTVAAKKYDM 338
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY---ATACATTRVICAI 186
EAW P +RE+VSCSNC YQS RL +R ++KQ ++ +TA AT+R + I
Sbjct: 339 EAWMPRDNEYREVVSCSNCTAYQSVRLNIRVRDAHDFESKQWLHTLNSTAVATSRALRCI 398
Query: 187 LETHQTETG-VRIPDCLRKFV 206
LE +QTE G V IP LR ++
Sbjct: 399 LENYQTEDGKVEIPKVLRPYM 419
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 103/152 (67%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LD+RG+FRVHQF K+EQF+ P ++SW+ +E++ N+EE + LG+ YRVVNI +G +
Sbjct: 271 LDSRGLFRVHQFTKIEQFIYCMP--EKSWEMHEELLANAEEIFTKLGLPYRVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+EAW P +RE+VSCSNC AYQS RL +R K +++H LN+T
Sbjct: 329 GTVAAKKYDMEAWMPRDNEYREVVSCSNCTAYQSVRLNIRVRDAHDFESK-QWLHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R + ILE +QTE G V IP LR ++
Sbjct: 388 AVATSRALRCILENYQTEDGKVEIPKVLRPYM 419
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 32/146 (21%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E DD YLIAT+E P+ A+++D E LP++ +G+S CFR+E A G+ R +
Sbjct: 221 KIEDDDAYLIATAEHPMAAMYQDEIFEEKDLPLKMVGISPCFRREIGAHGLDSRGLFRVH 280
Query: 585 FHVTCAQREGLLSEATSEEVDQADPFYAHCRLHADKLEDFSKFS-KILVCCVCLGE---- 639
Q + E + E H L A+ E F+K V +C G+
Sbjct: 281 QFTKIEQFIYCMPEKSWE---------MHEELLANAEEIFTKLGLPYRVVNICTGDIGTV 331
Query: 640 ------------RSDDVNEIVECDSC 653
R ++ E+V C +C
Sbjct: 332 AAKKYDMEAWMPRDNEYREVVSCSNC 357
>sp|A0RTS8|SYS_CENSY Serine--tRNA ligase OS=Cenarchaeum symbiosum (strain A) GN=serS
PE=3 SV=1
Length = 418
Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 131/200 (65%), Gaps = 11/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLI TSE + A+H D + E LP+RY GVS CFR+E G+HG+D +GIFRVH
Sbjct: 217 KIEDDDLYLIGTSEHAMAAMHSDEII-EGGLPLRYAGVSPCFRKEAGAHGKDQKGIFRVH 275
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+K+EQFV + P D SW+ D M++ +EEFY LGI YRVV + SG + +AK D+
Sbjct: 276 QFDKIEQFVFSKPED--SWREHDRMLEITEEFYQGLGIPYRVVLLSSGDMGKVSAKTYDI 333
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY-------GQTKQKIYATACATTRVICAIL 187
E W A+RE+VSCSNCLD+QSRRL VR+ Q + +T AT+R++ I+
Sbjct: 334 ECWMAAQDAYREVVSCSNCLDFQSRRLKVRFRDRTDEDTQYVHTLNSTLAATSRLLACII 393
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E Q G +R+P L+K+V
Sbjct: 394 ENFQEADGTIRVPQPLQKYV 413
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF+K+EQFV + P D SW+ D M++ +EEFY LGI YRVV + SG +
Sbjct: 267 DQKGIFRVHQFDKIEQFVFSKPED--SWREHDRMLEITEEFYQGLGIPYRVVLLSSGDMG 324
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+E W A+RE+VSCSNCL +QSRRL VR+ + +E ++VH LN+T
Sbjct: 325 KVSAKTYDIECWMAAQDAYREVVSCSNCLDFQSRRLKVRF--RDRTDEDTQYVHTLNSTL 382
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
AT+R++ I+E Q G +R+P L+K+V
Sbjct: 383 AATSRLLACIIENFQEADGTIRVPQPLQKYV 413
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E DD YLI TSE + A+H D + E LP+RY GVS CFR+E A
Sbjct: 217 KIEDDDLYLIGTSEHAMAAMHSDEII-EGGLPLRYAGVSPCFRKEAGA 263
>sp|A3DP85|SYS_STAMF Serine--tRNA ligase OS=Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1) GN=serS PE=3 SV=1
Length = 459
Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 143/230 (62%), Gaps = 21/230 (9%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E P+ A+H +PE LP++Y+G+S CFR+E G+ RD +GIFRVH
Sbjct: 243 KIEGEDLYLIATAEHPLAALHAWEDIPEEELPLKYVGISPCFRKEAGAGNRDLKGIFRVH 302
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P D SW +++E+I N+E + LGI YR+VNI SG L AAKK DL
Sbjct: 303 QFHKVEQFVYAKPED--SWDIMEELISNAEHLFRGLGIPYRIVNIASGDLGAPAAKKYDL 360
Query: 135 EAWFPGSGAFRELVSCSNCLDYQS----RRLLVRYGQTKQKIY---ATACATTRVICAIL 187
EAW P G +RE+VSCSN D+Q+ RL+ R G K+ ++ +TA A+TR I AIL
Sbjct: 361 EAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVKEYLHTLNSTAIASTRTITAIL 420
Query: 188 ETHQTETG-VRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQ 236
E Q G V +P LRK++ K+APID K++K
Sbjct: 421 ENFQEPDGTVIVPKVLRKYLEV-----------FKSAPIDAIHPVKKEKN 459
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 110/181 (60%), Gaps = 16/181 (8%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV P D SW ++E+I N+E + LGI YR+VNI SG L
Sbjct: 294 DLKGIFRVHQFHKVEQFVYAKPED--SWDIMEELISNAEHLFRGLGIPYRIVNIASGDLG 351
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLEAW P G +RE+VSCSN +Q+ RL +R + K M + E++H LN+TA
Sbjct: 352 APAAKKYDLEAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVK--EYLHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKK 481
A+TR I AILE Q G V +P LRK++ K+APID K++K
Sbjct: 410 IASTRTITAILENFQEPDGTVIVPKVLRKYLEV-----------FKSAPIDAIHPVKKEK 458
Query: 482 Q 482
Sbjct: 459 N 459
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E P+ A+H +PE LP++Y+G+S CFR+E AG
Sbjct: 243 KIEGEDLYLIATAEHPLAALHAWEDIPEEELPLKYVGISPCFRKEAGAG 291
>sp|A2BM70|SYS_HYPBU Serine--tRNA ligase OS=Hyperthermus butylicus (strain DSM 5456 /
JCM 9403) GN=serS PE=3 SV=1
Length = 460
Score = 194 bits (492), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 131/200 (65%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E P+ ++ + + E LPI+ +G+S CFR+E G+ RD +GIFRVH
Sbjct: 244 KVEDEDLYLIATAEHPLAGLYYNEEIMEDELPIKLVGISPCFRKEAGAGNRDLKGIFRVH 303
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ESW +L+E+I+N+EE + LG+ YRVVN+VSG L AAKK DL
Sbjct: 304 QFHKVEQFVYAKP--EESWDILEELIRNAEELFQGLGLPYRVVNVVSGELGAPAAKKYDL 361
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAIL 187
E W P G +RE+VS SN D+QS RL +R + K + +TA A+TR I AIL
Sbjct: 362 EVWMPAQGKYREMVSASNTTDWQSYRLNIRLVRKKDMKREYVHTLNSTAIASTRTITAIL 421
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E Q G V IP LRK++
Sbjct: 422 ENFQEPDGTVVIPKVLRKYL 441
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV P +ESW L+E+I+N+EE + LG+ YRVVN+VSG L
Sbjct: 295 DLKGIFRVHQFHKVEQFVYAKP--EESWDILEELIRNAEELFQGLGLPYRVVNVVSGELG 352
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P G +RE+VS SN +QS RL +R + K M K E+VH LN+TA
Sbjct: 353 APAAKKYDLEVWMPAQGKYREMVSASNTTDWQSYRLNIRLVRKKDM--KREYVHTLNSTA 410
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I AILE Q G V IP LRK++
Sbjct: 411 IASTRTITAILENFQEPDGTVVIPKVLRKYL 441
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E P+ ++ + + E LPI+ +G+S CFR+E AG
Sbjct: 244 KVEDEDLYLIATAEHPLAGLYYNEEIMEDELPIKLVGISPCFRKEAGAG 292
>sp|Q2FS27|SYS_METHJ Serine--tRNA ligase OS=Methanospirillum hungatei (strain JF-1 / DSM
864) GN=serS PE=3 SV=1
Length = 425
Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 135/201 (67%), Gaps = 11/201 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIATSE P+ A+++D E LP+R G+S CFR+E+GSHG DT+G+FRVH
Sbjct: 221 KIEDDDAYLIATSEHPMAAMYQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDTKGLFRVH 280
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P D+SW + +E+ +N+EE + L I YRVVNI +G + AAKK D+
Sbjct: 281 QFHKVEQFVYCHP--DDSWTIHEELRENAEEIFQKLEIPYRVVNICTGDIGTVAAKKYDI 338
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY---ATACATTRVICAI 186
EAW P +RE+VSCSNC YQ+ RL +R ++KQ ++ +TA AT+R + AI
Sbjct: 339 EAWMPRENEYREVVSCSNCTTYQAVRLNIRVRDKEDFESKQFVHTLNSTAIATSRAMRAI 398
Query: 187 LETHQTETG-VRIPDCLRKFV 206
LE +Q E G V IP LR ++
Sbjct: 399 LENNQQEDGSVVIPKVLRPYM 419
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 101/152 (66%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF KVEQFV P D+SW +E+ +N+EE + L I YRVVNI +G +
Sbjct: 271 LDTKGLFRVHQFHKVEQFVYCHP--DDSWTIHEELRENAEEIFQKLEIPYRVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+EAW P +RE+VSCSNC YQ+ RL +R + K +FVH LN+T
Sbjct: 329 GTVAAKKYDIEAWMPRENEYREVVSCSNCTTYQAVRLNIRVRDKEDFESK-QFVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R + AILE +Q E G V IP LR ++
Sbjct: 388 AIATSRAMRAILENNQQEDGSVVIPKVLRPYM 419
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 32/146 (21%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCA 590
K E DD YLIATSE P+ A+++D E LP+R G+S CFR+E + T
Sbjct: 221 KIEDDDAYLIATSEHPMAAMYQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDT------- 273
Query: 591 QREGLLSEATSEEVDQ------ADPFYAHCRLHADKLEDFSKFS-KILVCCVCLGE---- 639
+GL +V+Q D + H L + E F K V +C G+
Sbjct: 274 --KGLFRVHQFHKVEQFVYCHPDDSWTIHEELRENAEEIFQKLEIPYRVVNICTGDIGTV 331
Query: 640 ------------RSDDVNEIVECDSC 653
R ++ E+V C +C
Sbjct: 332 AAKKYDIEAWMPRENEYREVVSCSNC 357
>sp|C6A4A3|SYS_THESM Serine--tRNA ligase OS=Thermococcus sibiricus (strain MM 739 / DSM
12597) GN=serS PE=3 SV=1
Length = 455
Score = 193 bits (490), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 131/196 (66%), Gaps = 10/196 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLI TSE P+ +H + L +LPI Y GVS CFR+E G+ G+DT+GIFRVH
Sbjct: 241 KIEGEDLYLIPTSEHPLAGMHSNEILDGHNLPILYAGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQFV P +ESW+ ++++QN+EE + L I YR+VNI +G L +AAAKK D+
Sbjct: 301 QFHKVEQFVYARP--EESWEWHEKLLQNAEEIFQALEIPYRIVNICTGDLGYAAAKKYDI 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
EAW G FRE+VSCSNC ++Q+RRL +R+ + + +TA AT+R I AI+
Sbjct: 359 EAWMSAQGKFREVVSCSNCTEWQARRLNIRFRDKPNEKPRFVHTLNSTAIATSRAIVAII 418
Query: 188 ETHQTETG-VRIPDCL 202
E Q E G V+IP L
Sbjct: 419 ENFQEEDGTVKIPKAL 434
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 105/150 (70%), Gaps = 5/150 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A DT+GIFRVHQF KVEQFV P +ESW+ ++++QN+EE + L I YR+VNI +G
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYARP--EESWEWHEKLLQNAEEIFQALEIPYRIVNICTG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L +AAAKK D+EAW G FRE+VSCSNC +Q+RRL +R+ K NEK FVH LN
Sbjct: 347 DLGYAAAKKYDIEAWMSAQGKFREVVSCSNCTEWQARRLNIRF--RDKPNEKPRFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCL 448
+TA AT+R I AI+E Q E G V+IP L
Sbjct: 405 STAIATSRAIVAIIENFQEEDGTVKIPKAL 434
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEC 576
K E +D YLI TSE P+ +H + L +LPI Y GVS CFR+E
Sbjct: 241 KIEGEDLYLIPTSEHPLAGMHSNEILDGHNLPILYAGVSPCFRKEA 286
>sp|A9A4V3|SYS_NITMS Serine--tRNA ligase OS=Nitrosopumilus maritimus (strain SCM1)
GN=serS PE=3 SV=1
Length = 421
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 133/200 (66%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D Y+I TSE + A+H + LPIRY GVS CFR+E G+HGRD +GIFRVH
Sbjct: 218 KVEEEDLYMIGTSEHAMAAMHSKEIIEGKDLPIRYAGVSPCFRKEAGAHGRDQKGIFRVH 277
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF+K+EQFV P D SWK ++M+ +EEFY L I +RV+ + +G + +AK D+
Sbjct: 278 QFDKIEQFVYARPED--SWKEHEKMLAVAEEFYQKLEIPHRVMLLSTGDMGKISAKTYDI 335
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRY----GQTKQKIY---ATACATTRVICAIL 187
EAW G ++RE+VSCSNCLDYQ+RRL +R+ + Q I+ +T ATTRV+ +I+
Sbjct: 336 EAWMAGQNSYREIVSCSNCLDYQARRLKIRFRDKTNEDTQYIHTLNSTLVATTRVLVSIM 395
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E QT+ G ++IP L+ ++
Sbjct: 396 ENFQTKDGHIKIPQVLQSYM 415
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 104/151 (68%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF+K+EQFV P D SWK ++M+ +EEFY L I +RV+ + +G +
Sbjct: 269 DQKGIFRVHQFDKIEQFVYARPED--SWKEHEKMLAVAEEFYQKLEIPHRVMLLSTGDMG 326
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
+AK D+EAW G ++RE+VSCSNCL YQ+RRL +R+ K NE +++H LN+T
Sbjct: 327 KISAKTYDIEAWMAGQNSYREIVSCSNCLDYQARRLKIRF--RDKTNEDTQYIHTLNSTL 384
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
ATTRV+ +I+E QT+ G ++IP L+ ++
Sbjct: 385 VATTRVLVSIMENFQTKDGHIKIPQVLQSYM 415
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA 578
K E +D Y+I TSE + A+H + LPIRY GVS CFR+E A
Sbjct: 218 KVEEEDLYMIGTSEHAMAAMHSKEIIEGKDLPIRYAGVSPCFRKEAGA 265
>sp|A7I890|SYS_METB6 Serine--tRNA ligase OS=Methanoregula boonei (strain 6A8) GN=serS
PE=3 SV=1
Length = 425
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 132/197 (67%), Gaps = 11/197 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
DD YLIATSE PI A+++D E LP+R G+S CFR+E+G+HG DT+G+FRVHQF K
Sbjct: 225 DDTYLIATSEHPIAAMYQDEIFEEKDLPLRLCGLSPCFRREIGAHGLDTKGLFRVHQFTK 284
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
+EQFV P + SW++ +E++ N+EE + LG+ Y VVNI +G + AAKK D+EAW
Sbjct: 285 IEQFVFCRPEN--SWQIHEELLANAEEVFTKLGLPYHVVNICTGDIGTVAAKKYDIEAWM 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYG-----QTKQKIY---ATACATTRVICAILETH 190
P A++E+VSCSNC YQ+ L +R +TK ++ +TA AT+R + ILE +
Sbjct: 343 PRENAYKEVVSCSNCTSYQAASLNIRVRDKENFETKHLVHTLNSTAIATSRALRCILENY 402
Query: 191 QTETG-VRIPDCLRKFV 206
Q G V IPD LR+++
Sbjct: 403 QNRDGSVTIPDVLRQYM 419
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 102/152 (67%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF K+EQFV P + SW+ +E++ N+EE + LG+ Y VVNI +G +
Sbjct: 271 LDTKGLFRVHQFTKIEQFVFCRPEN--SWQIHEELLANAEEVFTKLGLPYHVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+EAW P A++E+VSCSNC +YQ+ L +R + K+ E VH LN+T
Sbjct: 329 GTVAAKKYDIEAWMPRENAYKEVVSCSNCTSYQAASLNIRV-RDKENFETKHLVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R + ILE +Q G V IPD LR+++
Sbjct: 388 AIATSRALRCILENYQNRDGSVTIPDVLRQYM 419
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 32/142 (22%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREG 594
DD YLIATSE PI A+++D E LP+R G+S CFR+E A T +G
Sbjct: 225 DDTYLIATSEHPIAAMYQDEIFEEKDLPLRLCGLSPCFRREIGAHGLDT---------KG 275
Query: 595 LLSEATSEEVDQ------ADPFYAHCRLHADKLEDFSKFS-KILVCCVCLGE-------- 639
L +++Q + + H L A+ E F+K V +C G+
Sbjct: 276 LFRVHQFTKIEQFVFCRPENSWQIHEELLANAEEVFTKLGLPYHVVNICTGDIGTVAAKK 335
Query: 640 --------RSDDVNEIVECDSC 653
R + E+V C +C
Sbjct: 336 YDIEAWMPRENAYKEVVSCSNC 357
>sp|A4YI40|SYS_METS5 Serine--tRNA ligase OS=Metallosphaera sedula (strain ATCC 51363 /
DSM 5348) GN=serS PE=3 SV=1
Length = 455
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 129/200 (64%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E PI A++ + LP+RY+G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIEGEDLYLIATAEHPIAALYFKEEIEAERLPLRYVGLSPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ + P D SWK +E++ N+E+ + L + YRVVNI SG L AAKK DL
Sbjct: 301 QFNKVEQFIFSLPED--SWKFHEELLGNAEQIFQGLELPYRVVNIASGDLGACAAKKYDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +R+ K+ + +TA ATTR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRFVDRKKNRKGFVHTLNSTAVATTRAITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V IP LR ++
Sbjct: 419 ENNQLEDGSVVIPKVLRPYL 438
Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 103/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ + P D SWK +E++ N+E+ + L + YRVVNI SG
Sbjct: 289 ANKDLKGIFRVHQFNKVEQFIFSLPED--SWKFHEELLGNAEQIFQGLELPYRVVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +R+ KK N K FVH LN
Sbjct: 347 DLGACAAKKYDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRFVDRKK-NRK-GFVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA ATTR I AILE +Q E G V IP LR ++
Sbjct: 405 STAVATTRAITAILENNQLEDGSVVIPKVLRPYL 438
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E PI A++ + LP+RY+G+S FR+E A
Sbjct: 241 KIEGEDLYLIATAEHPIAALYFKEEIEAERLPLRYVGLSPAFRKEAGAA 289
>sp|O33780|SYS_SULSO Serine--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC 35092 /
DSM 1617 / JCM 11322 / P2) GN=serS PE=3 SV=2
Length = 457
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 127/202 (62%), Gaps = 10/202 (4%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E PI A+ + + LP+++ G+S FR+E + +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHPIAAMFFKEEIEKDKLPLKFAGISPAFRKEASAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHSELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNRRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFVPA 208
E +Q E G V +P LRK++ A
Sbjct: 419 ENYQREDGVVEVPKVLRKYLEA 440
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 103/156 (66%), Gaps = 5/156 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHSELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N + +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNRRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFVPA 454
+TA A+TR I AILE +Q E G V +P LRK++ A
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYLEA 440
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E PI A+ + + LP+++ G+S FR+E A
Sbjct: 241 KIENEDLYLIATAEHPIAAMFFKEEIEKDKLPLKFAGISPAFRKEASAA 289
>sp|C3NEQ7|SYS_SULIY Serine--tRNA ligase OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=serS PE=3 SV=1
Length = 457
Score = 186 bits (472), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E A G+ R +
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>sp|C3NGY7|SYS_SULIN Serine--tRNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=serS PE=3 SV=1
Length = 457
Score = 186 bits (472), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E A G+ R +
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>sp|C3MQH9|SYS_SULIL Serine--tRNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=serS PE=3 SV=1
Length = 457
Score = 186 bits (472), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E A G+ R +
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>sp|C4KHR4|SYS_SULIK Serine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=serS PE=3 SV=1
Length = 457
Score = 186 bits (472), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E A G+ R +
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>sp|C3N6A0|SYS_SULIA Serine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.27)
GN=serS PE=3 SV=1
Length = 457
Score = 186 bits (472), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E I A+ + + LP+++ G+S FR+E A G+ R +
Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>sp|Q0W8S5|SYS_UNCMA Serine--tRNA ligase OS=Uncultured methanogenic archaeon RC-I
GN=serS PE=3 SV=1
Length = 425
Score = 186 bits (472), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 129/201 (64%), Gaps = 11/201 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E DD YLIATSE PI A+++ E LP+R G+S CFR+E+G+HG DT+G+FRVH
Sbjct: 221 KIEGDDMYLIATSEHPIGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVH 280
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF K+EQFV P D SWK+ +E++ N+E + LG+ Y VVNI +G + AAKK D+
Sbjct: 281 QFHKIEQFVFCKPED--SWKIHEEILANAEAVFQQLGLPYHVVNICTGDIGTVAAKKYDI 338
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK--------QKIYATACATTRVICAI 186
E W P ++E+VSCSNC YQ+ RL ++ K + +TA AT+R + AI
Sbjct: 339 EVWMPRENTYKEVVSCSNCTAYQATRLNIKVRDPKDFESKRYVHTLNSTAIATSRAMRAI 398
Query: 187 LETHQTETG-VRIPDCLRKFV 206
LE +Q + G V IP+ LR ++
Sbjct: 399 LENNQQKDGSVLIPEVLRPYM 419
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF K+EQFV P D SWK +E++ N+E + LG+ Y VVNI +G +
Sbjct: 271 LDTKGLFRVHQFHKIEQFVFCKPED--SWKIHEEILANAEAVFQQLGLPYHVVNICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK D+E W P ++E+VSCSNC AYQ+ RL ++ K K +VH LN+T
Sbjct: 329 GTVAAKKYDIEVWMPRENTYKEVVSCSNCTAYQATRLNIKVRDPKDFESK-RYVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R + AILE +Q + G V IP+ LR ++
Sbjct: 388 AIATSRAMRAILENNQQKDGSVLIPEVLRPYM 419
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E DD YLIATSE PI A+++ E LP+R G+S CFR+E A G+ R +
Sbjct: 221 KIEGDDMYLIATSEHPIGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVH 280
Query: 585 -FH 586
FH
Sbjct: 281 QFH 283
>sp|C3MW57|SYS_SULIM Serine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=serS PE=3 SV=1
Length = 457
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 126/200 (63%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E + A+ + + LP+++ G+S FR+E G+ +D +GIFRVH
Sbjct: 241 KIENEDLYLIATAEHSVAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG L AAKK DL
Sbjct: 301 QFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDL 358
Query: 135 EAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK-------IYATACATTRVICAIL 187
E W P FRE+VSCSNC D+Q+ R+ +RY K + +TA A+TR I AIL
Sbjct: 359 EVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAIL 418
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V +P LRK++
Sbjct: 419 ENYQREDGVVEVPKVLRKYL 438
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 300 ADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSG 359
A+ D +GIFRVHQF KVEQF+ ++P D SWK E+I N+E + L + YR+VNI SG
Sbjct: 289 ANKDLKGIFRVHQFHKVEQFIFSTPED--SWKYHAELITNAESIFQQLELPYRIVNIASG 346
Query: 360 ALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLN 419
L AAKK DLE W P FRE+VSCSNC +Q+ R+ +RY K N K +VH LN
Sbjct: 347 DLGACAAKKFDLEVWMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRK--NNKRGYVHTLN 404
Query: 420 ATACATTRVICAILETHQTETG-VRIPDCLRKFV 452
+TA A+TR I AILE +Q E G V +P LRK++
Sbjct: 405 STAIASTRTITAILENYQREDGVVEVPKVLRKYL 438
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY 584
K E +D YLIAT+E + A+ + + LP+++ G+S FR+E A G+ R +
Sbjct: 241 KIENEDLYLIATAEHSVAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300
Query: 585 -FH 586
FH
Sbjct: 301 QFH 303
>sp|Q9YAG3|SYS_AERPE Serine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=serS PE=3 SV=2
Length = 460
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 130/196 (66%), Gaps = 10/196 (5%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D YLIAT+E P+ A++ +S + + LP++ +GVS CFR+E G+ RD +GIFRVHQF K
Sbjct: 248 EDLYLIATAEHPLAALYYNSEIYDEDLPLKLVGVSPCFRKEAGAGNRDLKGIFRVHQFHK 307
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQFV + P +ES K+ +E+I N++E + L I +RVVNI SG L A KK DLEAW
Sbjct: 308 VEQFVYSLP--EESSKLHEELISNAKEIFKGLEIPFRVVNIASGDLGACAVKKYDLEAWM 365
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-------QKIYATACATTRVICAILETHQ 191
P G +RE+VS SNC D+Q+ RL +R + K + ATA A+TR I AILE Q
Sbjct: 366 PAQGKYREMVSASNCTDWQAYRLGIRLVRRKGMERGYVHTLNATAVASTRTITAILENFQ 425
Query: 192 TETG-VRIPDCLRKFV 206
E G V IP LR+++
Sbjct: 426 DEEGVVAIPRALRRYL 441
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 99/151 (65%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQFV + P +ES K +E+I N++E + L I +RVVNI SG L
Sbjct: 295 DLKGIFRVHQFHKVEQFVYSLP--EESSKLHEELISNAKEIFKGLEIPFRVVNIASGDLG 352
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
A KK DLEAW P G +RE+VS SNC +Q+ RL +R + K M +VH LNATA
Sbjct: 353 ACAVKKYDLEAWMPAQGKYREMVSASNCTDWQAYRLGIRLVRRKGMERG--YVHTLNATA 410
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I AILE Q E G V IP LR+++
Sbjct: 411 VASTRTITAILENFQDEEGVVAIPRALRRYL 441
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
+D YLIAT+E P+ A++ +S + + LP++ +GVS CFR+E AG
Sbjct: 248 EDLYLIATAEHPLAALYYNSEIYDEDLPLKLVGVSPCFRKEAGAG 292
>sp|A3CTP4|SYS_METMJ Serine--tRNA ligase OS=Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1) GN=serS PE=3 SV=1
Length = 425
Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 130/200 (65%), Gaps = 17/200 (8%)
Query: 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 78
+D+YLIATSE P+ A++ D E LP+R G+S CFR+E+G+HG DT+G+FRVHQF K
Sbjct: 225 EDEYLIATSEHPMAAMYCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFHK 284
Query: 79 VEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWF 138
VEQF+ +P ++SW + +E++ N+EE + LG+ YR+V+I +G + AAKK DLE W
Sbjct: 285 VEQFIYATP--EQSWDLHEELMANAEEVFQRLGLPYRIVSICTGDIGTVAAKKYDLEVWM 342
Query: 139 PGSGAFRELVSCSNCLDYQSRRLLV-----------RYGQTKQKIYATACATTRVICAIL 187
P +RE VSCSNC YQ+ RL + RY T + +TA AT+R I AIL
Sbjct: 343 PREERYREAVSCSNCTAYQAVRLNIKVRNPTEFTEKRYVHT---LNSTAIATSRAIRAIL 399
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E +Q E G V IP LR ++
Sbjct: 400 ENNQNEDGSVTIPKALRPYL 419
Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%), Gaps = 4/152 (2%)
Query: 302 LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGAL 361
LDT+G+FRVHQF KVEQF+ +P ++SW +E++ N+EE + LG+ YR+V+I +G +
Sbjct: 271 LDTKGLFRVHQFHKVEQFIYATP--EQSWDLHEELMANAEEVFQRLGLPYRIVSICTGDI 328
Query: 362 NHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421
AAKK DLE W P +RE VSCSNC AYQ+ RL ++ + EK +VH LN+T
Sbjct: 329 GTVAAKKYDLEVWMPREERYREAVSCSNCTAYQAVRLNIKVRNPTEFTEK-RYVHTLNST 387
Query: 422 ACATTRVICAILETHQTETG-VRIPDCLRKFV 452
A AT+R I AILE +Q E G V IP LR ++
Sbjct: 388 AIATSRAIRAILENNQNEDGSVTIPKALRPYL 419
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 535 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDA------GMCRTY-FH 586
+D+YLIATSE P+ A++ D E LP+R G+S CFR+E A G+ R + FH
Sbjct: 225 EDEYLIATSEHPMAAMYCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFH 283
>sp|B8D3V1|SYS_DESK1 Serine--tRNA ligase OS=Desulfurococcus kamchatkensis (strain 1221n
/ DSM 18924) GN=serS PE=3 SV=1
Length = 459
Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 133/200 (66%), Gaps = 10/200 (5%)
Query: 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH 74
K E +D YLIAT+E + A+H +PE LP++Y+GVS CFR+E G+ RD +GIFRVH
Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAGNRDLKGIFRVH 302
Query: 75 QFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL 134
QF KVEQ+V P +ESW +++E+I N+E+ + L + YRVVNI SG L AAKK DL
Sbjct: 303 QFHKVEQYVYAKP--EESWALMEELIGNAEDLFKGLELPYRVVNIASGDLGAPAAKKYDL 360
Query: 135 EAWFPGSGAFRELVSCSNCLDYQS----RRLLVRYGQTKQKIY---ATACATTRVICAIL 187
E W P G FRE+VSCSN D+QS RL+ R G K+ ++ +TA A+TR I +IL
Sbjct: 361 ETWMPAQGLFREMVSCSNTTDWQSYRLKTRLVRRKGMVKEYVHTLNSTAIASTRTITSIL 420
Query: 188 ETHQTETG-VRIPDCLRKFV 206
E Q E G V +P LRK++
Sbjct: 421 ENRQNEDGTVTVPRVLRKYL 440
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 100/151 (66%), Gaps = 5/151 (3%)
Query: 303 DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALN 362
D +GIFRVHQF KVEQ+V P +ESW ++E+I N+E+ + L + YRVVNI SG L
Sbjct: 294 DLKGIFRVHQFHKVEQYVYAKP--EESWALMEELIGNAEDLFKGLELPYRVVNIASGDLG 351
Query: 363 HAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422
AAKK DLE W P G FRE+VSCSN +QS RL R + K M + E+VH LN+TA
Sbjct: 352 APAAKKYDLETWMPAQGLFREMVSCSNTTDWQSYRLKTRLVRRKGMVK--EYVHTLNSTA 409
Query: 423 CATTRVICAILETHQTETG-VRIPDCLRKFV 452
A+TR I +ILE Q E G V +P LRK++
Sbjct: 410 IASTRTITSILENRQNEDGTVTVPRVLRKYL 440
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 531 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAG 579
K E +D YLIAT+E + A+H +PE LP++Y+GVS CFR+E AG
Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAG 291
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 408,821,544
Number of Sequences: 539616
Number of extensions: 17745365
Number of successful extensions: 60539
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 53784
Number of HSP's gapped (non-prelim): 4261
length of query: 1083
length of database: 191,569,459
effective HSP length: 128
effective length of query: 955
effective length of database: 122,498,611
effective search space: 116986173505
effective search space used: 116986173505
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)