Query psy11602
Match_columns 1083
No_of_seqs 703 out of 3415
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 22:52:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11602.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11602hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vbb_A Seryl-tRNA synthetase, 100.0 7E-61 2.4E-65 562.5 7.2 285 193-500 198-505 (522)
2 3lss_A Seryl-tRNA synthetase; 100.0 2.6E-57 8.8E-62 529.6 6.0 255 193-472 205-476 (484)
3 3qne_A Seryl-tRNA synthetase, 100.0 3.3E-57 1.1E-61 528.2 5.7 259 192-476 181-455 (485)
4 3vbb_A Seryl-tRNA synthetase, 100.0 4.8E-52 1.7E-56 487.7 14.7 224 17-243 262-494 (522)
5 3err_A Fusion protein of micro 100.0 3.4E-52 1.2E-56 495.1 5.2 242 193-457 272-526 (536)
6 3lss_A Seryl-tRNA synthetase; 100.0 1E-49 3.5E-54 465.6 17.5 204 18-226 261-476 (484)
7 1wle_A Seryl-tRNA synthetase; 100.0 1.7E-50 5.9E-55 476.1 5.4 256 193-476 216-486 (501)
8 3qne_A Seryl-tRNA synthetase, 100.0 9.9E-50 3.4E-54 465.3 11.7 211 18-234 238-459 (485)
9 3err_A Fusion protein of micro 100.0 1.7E-47 5.9E-52 454.8 14.7 192 19-210 327-525 (536)
10 1wle_A Seryl-tRNA synthetase; 100.0 1.3E-45 4.5E-50 434.6 14.1 194 13-207 269-469 (501)
11 1ses_A Seryl-tRNA synthetase; 100.0 2.9E-46 9.9E-51 434.4 5.1 238 193-453 163-413 (421)
12 2dq0_A Seryl-tRNA synthetase; 100.0 2.4E-45 8.2E-50 429.9 5.9 236 194-453 191-439 (455)
13 2dq3_A Seryl-tRNA synthetase; 100.0 1.3E-43 4.6E-48 412.8 5.5 236 194-453 170-418 (425)
14 1ses_A Seryl-tRNA synthetase; 100.0 1.1E-42 3.7E-47 404.5 12.6 188 19-206 218-412 (421)
15 2dq0_A Seryl-tRNA synthetase; 100.0 9E-42 3.1E-46 399.7 15.0 186 19-206 245-438 (455)
16 3mf2_A BLL0957 protein; aminoa 100.0 1.3E-42 4.4E-47 387.3 1.4 225 196-455 64-333 (346)
17 2dq3_A Seryl-tRNA synthetase; 100.0 4.7E-40 1.6E-44 383.0 13.7 188 18-207 223-418 (425)
18 3mf2_A BLL0957 protein; aminoa 100.0 2.4E-35 8.3E-40 328.8 8.4 183 13-208 136-332 (346)
19 3ial_A Prolyl-tRNA synthetase; 100.0 2.9E-35 1E-39 348.4 8.5 182 18-206 114-301 (518)
20 1nj1_A PROR, proline-tRNA synt 100.0 3.1E-32 1.1E-36 323.8 12.4 182 18-206 129-316 (501)
21 2cja_A Seryl-tRNA synthetase; 100.0 3.7E-33 1.3E-37 330.0 4.1 232 196-466 231-522 (522)
22 4hvc_A Bifunctional glutamate/ 100.0 3.1E-32 1E-36 323.3 10.8 182 19-206 121-310 (519)
23 2cja_A Seryl-tRNA synthetase; 100.0 2.4E-32 8.2E-37 323.1 6.9 183 16-208 314-514 (522)
24 1nj1_A PROR, proline-tRNA synt 100.0 1.6E-28 5.4E-33 292.0 12.4 230 195-452 70-316 (501)
25 3ial_A Prolyl-tRNA synthetase; 99.9 1.5E-28 5E-33 291.2 9.6 230 195-452 54-301 (518)
26 4hvc_A Bifunctional glutamate/ 99.9 6.6E-28 2.3E-32 286.2 11.4 233 196-452 61-310 (519)
27 1nj8_A Proline-tRNA synthetase 99.9 1.9E-27 6.5E-32 280.1 11.4 182 18-206 97-284 (459)
28 2j3l_A Prolyl-tRNA synthetase; 99.9 3.1E-26 1.1E-30 277.0 14.0 141 13-163 96-236 (572)
29 1hc7_A Prolyl-tRNA synthetase; 99.9 6.3E-26 2.2E-30 268.2 11.3 181 18-206 103-289 (477)
30 3ikl_A DNA polymerase subunit 99.9 2.4E-24 8.2E-29 250.6 11.3 176 21-206 147-350 (459)
31 2i4l_A Proline-tRNA ligase; al 99.9 8.7E-24 3E-28 249.2 12.5 189 13-206 116-367 (458)
32 3ikl_A DNA polymerase subunit 99.9 1.6E-23 5.4E-28 243.8 9.4 171 271-452 153-350 (459)
33 1ati_A Glycyl-tRNA synthetase; 99.9 1.9E-22 6.5E-27 240.1 9.5 181 18-206 180-400 (505)
34 3uh0_A Threonyl-tRNA synthetas 99.8 7.9E-21 2.7E-25 223.7 11.1 177 17-206 120-347 (460)
35 1qf6_A THRRS, threonyl-tRNA sy 99.8 3.6E-22 1.2E-26 244.0 -1.9 179 14-206 320-541 (642)
36 1evl_A Threonyl-tRNA synthetas 99.8 1.4E-21 4.8E-26 226.7 -0.9 180 14-206 79-300 (401)
37 1nj8_A Proline-tRNA synthetase 99.8 6.8E-20 2.3E-24 215.9 11.5 226 200-452 42-284 (459)
38 1g5h_A Mitochondrial DNA polym 99.8 1.4E-19 4.9E-24 212.4 10.3 175 19-206 135-340 (454)
39 1ati_A Glycyl-tRNA synthetase; 99.8 1.2E-19 4E-24 216.1 5.1 163 283-452 202-400 (505)
40 1hc7_A Prolyl-tRNA synthetase; 99.8 8.2E-19 2.8E-23 207.5 11.6 226 200-452 48-289 (477)
41 1nyr_A Threonyl-tRNA synthetas 99.7 6.6E-19 2.2E-23 215.8 -0.5 181 14-206 321-547 (645)
42 1qf6_A THRRS, threonyl-tRNA sy 99.7 4.8E-18 1.6E-22 207.7 0.3 217 200-452 275-541 (642)
43 3a32_A Probable threonyl-tRNA 99.6 8.5E-17 2.9E-21 190.3 5.0 182 15-206 99-340 (471)
44 1evl_A Threonyl-tRNA synthetas 99.6 3.7E-16 1.2E-20 181.2 0.2 213 200-451 34-299 (401)
45 1g5h_A Mitochondrial DNA polym 99.5 5.8E-15 2E-19 173.5 9.9 156 284-452 157-340 (454)
46 3uh0_A Threonyl-tRNA synthetas 99.5 2.2E-14 7.5E-19 169.0 11.0 223 195-452 63-347 (460)
47 2i4l_A Proline-tRNA ligase; al 99.4 1.5E-13 5.2E-18 161.9 8.7 226 200-452 71-367 (458)
48 2zt5_A Glycyl-tRNA synthetase; 99.3 8.6E-13 3E-17 162.0 9.2 124 18-148 237-405 (693)
49 1nyr_A Threonyl-tRNA synthetas 99.3 9.1E-14 3.1E-18 170.4 -0.7 220 200-451 275-546 (645)
50 2kwj_A Zinc finger protein DPF 99.3 1.3E-12 4.6E-17 125.6 7.0 101 631-750 2-107 (114)
51 3v43_A Histone acetyltransfera 99.3 7.4E-12 2.5E-16 120.0 7.7 102 631-750 6-111 (112)
52 1qe0_A Histidyl-tRNA synthetas 99.0 2.4E-10 8.2E-15 132.9 9.0 96 13-119 67-164 (420)
53 2ysm_A Myeloid/lymphoid or mix 99.0 4.6E-10 1.6E-14 107.3 6.3 101 628-752 5-105 (111)
54 2j3l_A Prolyl-tRNA synthetase; 98.9 6.5E-10 2.2E-14 134.5 6.9 171 198-396 49-232 (572)
55 3a32_A Probable threonyl-tRNA 98.9 1.4E-09 4.6E-14 128.8 6.1 223 195-451 48-339 (471)
56 3asl_A E3 ubiquitin-protein li 98.8 1.1E-09 3.7E-14 96.2 3.5 50 1031-1081 13-63 (70)
57 1f62_A Transcription factor WS 98.8 8E-10 2.7E-14 91.0 2.3 43 1039-1081 2-44 (51)
58 2e6s_A E3 ubiquitin-protein li 98.8 1.5E-09 5.1E-14 97.1 4.1 50 1031-1081 21-71 (77)
59 3shb_A E3 ubiquitin-protein li 98.8 1.5E-09 5.1E-14 97.0 3.7 50 1031-1081 21-71 (77)
60 1h4v_B Histidyl-tRNA synthetas 98.8 7.1E-09 2.4E-13 120.6 10.0 95 13-118 68-163 (421)
61 1wu7_A Histidyl-tRNA synthetas 98.8 6.3E-09 2.2E-13 121.7 8.5 102 13-127 68-171 (434)
62 2ku3_A Bromodomain-containing 98.8 2.1E-09 7.1E-14 94.6 3.2 55 688-752 13-67 (71)
63 2e6r_A Jumonji/ARID domain-con 98.7 3E-09 1E-13 98.3 3.3 49 1033-1081 12-60 (92)
64 1htt_A Histidyl-tRNA synthetas 98.7 2.4E-08 8.1E-13 116.3 10.8 96 13-120 69-166 (423)
65 2kwj_A Zinc finger protein DPF 98.7 9.6E-09 3.3E-13 98.7 4.1 51 1031-1081 52-102 (114)
66 2l43_A N-teminal domain from h 98.7 5.6E-09 1.9E-13 95.7 2.2 55 688-752 22-76 (88)
67 2lri_C Autoimmune regulator; Z 98.6 8.4E-09 2.9E-13 89.5 2.0 43 1036-1081 11-53 (66)
68 2ysm_A Myeloid/lymphoid or mix 98.6 2E-08 6.8E-13 96.0 4.5 52 1030-1081 47-98 (111)
69 3dsq_A Pyrrolysyl-tRNA synthet 98.6 7.5E-08 2.6E-12 106.8 8.9 145 16-188 120-266 (288)
70 2yql_A PHD finger protein 21A; 98.6 3E-08 1E-12 83.3 3.7 44 1035-1081 7-50 (56)
71 3ask_A E3 ubiquitin-protein li 98.5 2.7E-08 9.3E-13 105.4 3.8 49 1032-1081 170-219 (226)
72 1mm2_A MI2-beta; PHD, zinc fin 98.5 4.1E-08 1.4E-12 83.9 3.9 43 1036-1081 8-50 (61)
73 1fp0_A KAP-1 corepressor; PHD 98.5 4E-08 1.4E-12 89.6 4.1 44 1035-1081 23-66 (88)
74 1xwh_A Autoimmune regulator; P 98.5 3.7E-08 1.3E-12 85.5 3.6 43 1036-1081 7-49 (66)
75 4e51_A Histidine--tRNA ligase; 98.5 1.5E-07 5.2E-12 111.1 9.8 89 13-113 97-186 (467)
76 3v43_A Histone acetyltransfera 98.5 4.6E-08 1.6E-12 93.7 4.1 51 1031-1081 55-106 (112)
77 2yt5_A Metal-response element- 98.5 3.5E-08 1.2E-12 85.5 2.8 59 689-752 4-62 (66)
78 2puy_A PHD finger protein 21A; 98.5 4.4E-08 1.5E-12 83.4 3.3 42 1037-1081 5-46 (60)
79 1wev_A Riken cDNA 1110020M19; 98.5 5.1E-08 1.8E-12 89.4 3.0 46 1036-1081 15-66 (88)
80 1wev_A Riken cDNA 1110020M19; 98.5 6.2E-08 2.1E-12 88.8 3.4 58 690-751 15-72 (88)
81 2l5u_A Chromodomain-helicase-D 98.4 4.9E-08 1.7E-12 83.4 2.2 44 1035-1081 9-52 (61)
82 2yt5_A Metal-response element- 98.4 1E-07 3.6E-12 82.5 2.3 46 1036-1081 5-55 (66)
83 1z7m_A ATP phosphoribosyltrans 98.3 1.2E-06 4E-11 99.7 9.3 91 13-117 87-178 (344)
84 2ku3_A Bromodomain-containing 98.2 4.4E-07 1.5E-11 79.8 2.5 45 1035-1081 14-60 (71)
85 2k16_A Transcription initiatio 98.2 5.8E-07 2E-11 79.8 2.4 47 1035-1081 16-62 (75)
86 1f62_A Transcription factor WS 98.2 9.7E-07 3.3E-11 72.5 3.4 49 693-751 2-50 (51)
87 2zt5_A Glycyl-tRNA synthetase; 98.1 5.7E-06 2E-10 101.8 10.2 102 285-388 262-408 (693)
88 3rac_A Histidine-tRNA ligase; 98.1 7.9E-06 2.7E-10 93.8 10.7 100 12-116 84-184 (373)
89 2e6r_A Jumonji/ARID domain-con 98.1 1.1E-06 3.7E-11 81.2 2.1 57 678-751 10-66 (92)
90 4gne_A Histone-lysine N-methyl 98.0 6.1E-06 2.1E-10 78.1 7.0 61 687-762 11-77 (107)
91 2l43_A N-teminal domain from h 98.0 1.2E-06 4.2E-11 80.2 1.9 44 1036-1081 24-69 (88)
92 2lq6_A Bromodomain-containing 98.0 1.2E-06 4E-11 80.2 1.6 41 841-885 9-49 (87)
93 2lri_C Autoimmune regulator; Z 98.0 3.1E-06 1.1E-10 73.4 4.1 52 688-752 9-60 (66)
94 3od1_A ATP phosphoribosyltrans 98.0 1.8E-05 6E-10 91.7 10.2 89 13-113 71-159 (400)
95 2e6s_A E3 ubiquitin-protein li 97.9 9.6E-06 3.3E-10 72.4 5.6 49 693-751 28-77 (77)
96 3lc0_A Histidyl-tRNA synthetas 97.9 2.4E-05 8.1E-10 92.2 10.5 88 13-112 91-178 (456)
97 1xwh_A Autoimmune regulator; P 97.9 5E-06 1.7E-10 72.1 3.4 52 688-752 5-56 (66)
98 3shb_A E3 ubiquitin-protein li 97.9 6.6E-06 2.3E-10 73.4 3.9 56 678-751 21-77 (77)
99 1mm2_A MI2-beta; PHD, zinc fin 97.9 6.9E-06 2.4E-10 70.1 3.5 51 689-752 7-57 (61)
100 2yql_A PHD finger protein 21A; 97.9 7E-06 2.4E-10 68.8 3.3 49 689-750 7-55 (56)
101 2lv9_A Histone-lysine N-methyl 97.8 6.9E-06 2.4E-10 76.7 3.5 44 1035-1080 26-69 (98)
102 2l5u_A Chromodomain-helicase-D 97.8 9.4E-06 3.2E-10 69.3 3.9 51 688-751 8-58 (61)
103 2puy_A PHD finger protein 21A; 97.8 7.9E-06 2.7E-10 69.4 3.3 48 690-750 4-51 (60)
104 3asl_A E3 ubiquitin-protein li 97.8 1.1E-05 3.8E-10 70.7 4.2 49 693-751 20-69 (70)
105 4g84_A Histidine--tRNA ligase, 97.8 2E-05 6.8E-10 92.6 7.2 95 12-118 74-168 (464)
106 3qtc_A Pyrrolysyl-tRNA synthet 97.7 8.3E-05 2.9E-09 82.4 9.5 86 18-117 128-213 (290)
107 2k16_A Transcription initiatio 97.6 2.6E-05 8.8E-10 69.1 2.4 53 689-751 16-68 (75)
108 1fp0_A KAP-1 corepressor; PHD 97.5 4.8E-05 1.6E-09 69.4 4.0 50 689-751 23-72 (88)
109 4g85_A Histidine-tRNA ligase, 97.5 0.0001 3.5E-09 88.0 7.7 95 12-118 127-221 (517)
110 3ask_A E3 ubiquitin-protein li 97.5 5.8E-05 2E-09 80.1 4.1 49 693-751 176-225 (226)
111 2lv9_A Histone-lysine N-methyl 97.4 0.00015 5.1E-09 67.7 5.2 50 690-751 27-76 (98)
112 3net_A Histidyl-tRNA synthetas 97.4 0.00034 1.2E-08 82.5 9.3 85 17-113 92-178 (465)
113 4gne_A Histone-lysine N-methyl 97.3 7.8E-05 2.7E-09 70.6 2.8 43 1035-1082 13-57 (107)
114 2vnf_A ING 4, P29ING4, inhibit 97.2 0.00011 3.6E-09 62.5 2.0 41 1036-1080 9-52 (60)
115 2vnf_A ING 4, P29ING4, inhibit 97.2 0.00014 4.7E-09 61.8 2.2 48 689-750 8-58 (60)
116 1qe0_A Histidyl-tRNA synthetas 97.1 9E-05 3.1E-09 85.9 1.2 133 197-355 17-163 (420)
117 3o36_A Transcription intermedi 97.1 0.00024 8.3E-09 73.5 4.2 51 689-752 2-52 (184)
118 3c6w_A P28ING5, inhibitor of g 97.1 0.00017 5.6E-09 61.1 2.3 49 689-751 7-58 (59)
119 1wen_A Inhibitor of growth fam 97.1 0.00038 1.3E-08 61.1 4.5 50 689-752 14-66 (71)
120 3u5n_A E3 ubiquitin-protein li 97.1 0.00031 1E-08 74.1 4.7 52 689-753 5-56 (207)
121 2jmi_A Protein YNG1, ING1 homo 97.0 0.00027 9.2E-09 64.8 3.1 48 689-750 24-75 (90)
122 1wen_A Inhibitor of growth fam 97.0 0.0004 1.4E-08 61.0 3.8 41 1036-1080 15-58 (71)
123 2g6q_A Inhibitor of growth pro 96.9 0.00027 9.4E-09 60.4 2.0 40 1036-1079 10-52 (62)
124 2g6q_A Inhibitor of growth pro 96.9 0.00034 1.2E-08 59.8 2.4 49 689-751 9-60 (62)
125 2jmi_A Protein YNG1, ING1 homo 96.9 0.00054 1.8E-08 62.8 3.8 42 1035-1080 24-68 (90)
126 3c6w_A P28ING5, inhibitor of g 96.8 0.00037 1.3E-08 59.0 2.1 40 1036-1079 8-50 (59)
127 3o70_A PHD finger protein 13; 96.8 0.00079 2.7E-08 58.6 3.7 41 1035-1076 17-57 (68)
128 2ro1_A Transcription intermedi 96.8 0.00054 1.8E-08 71.3 3.1 49 691-752 2-50 (189)
129 1weu_A Inhibitor of growth fam 96.8 0.00093 3.2E-08 61.4 4.1 42 1036-1081 35-79 (91)
130 1weu_A Inhibitor of growth fam 96.7 0.00089 3E-08 61.5 3.8 50 689-752 34-86 (91)
131 3o70_A PHD finger protein 13; 96.6 0.0017 5.7E-08 56.6 4.3 51 689-751 17-67 (68)
132 2lq6_A Bromodomain-containing 96.5 0.001 3.6E-08 60.6 2.6 63 545-621 17-85 (87)
133 1usy_A ATP phosphoribosyltrans 96.4 0.0057 2E-07 67.1 8.7 84 12-113 39-123 (275)
134 2rsd_A E3 SUMO-protein ligase 96.4 0.0027 9.4E-08 55.1 4.4 55 689-750 8-64 (68)
135 1we9_A PHD finger family prote 96.3 0.003 1E-07 54.0 4.3 56 689-752 4-59 (64)
136 3o7a_A PHD finger protein 13 v 96.3 0.0017 5.8E-08 53.4 2.4 36 1040-1075 6-41 (52)
137 1wee_A PHD finger family prote 96.2 0.0028 9.5E-08 55.6 3.5 53 689-751 14-66 (72)
138 1we9_A PHD finger family prote 96.1 0.0029 9.8E-08 54.1 2.9 38 1036-1073 5-43 (64)
139 2lbm_A Transcriptional regulat 96.1 0.00069 2.3E-08 67.2 -1.1 43 1036-1081 62-111 (142)
140 1x4i_A Inhibitor of growth pro 96.0 0.0021 7.2E-08 56.2 1.9 47 690-750 5-54 (70)
141 1x4i_A Inhibitor of growth pro 96.0 0.0026 8.8E-08 55.7 2.2 38 1040-1080 8-48 (70)
142 1wew_A DNA-binding family prot 96.0 0.0043 1.5E-07 55.3 3.7 60 687-752 12-73 (78)
143 3l4g_A Phenylalanyl-tRNA synth 95.9 0.021 7.1E-07 67.6 10.1 149 19-187 320-469 (508)
144 1wee_A PHD finger family prote 95.9 0.0046 1.6E-07 54.2 3.3 36 1036-1072 15-51 (72)
145 2vpb_A Hpygo1, pygopus homolog 95.6 0.0027 9.3E-08 54.7 0.9 58 689-749 6-64 (65)
146 3o7a_A PHD finger protein 13 v 95.6 0.0078 2.7E-07 49.4 3.5 47 693-750 5-51 (52)
147 2kgg_A Histone demethylase jar 95.5 0.0054 1.8E-07 50.4 2.1 32 1039-1070 4-37 (52)
148 2kgg_A Histone demethylase jar 95.3 0.0048 1.7E-07 50.7 1.2 48 693-749 4-52 (52)
149 2lbm_A Transcriptional regulat 95.3 0.0081 2.8E-07 59.5 2.9 57 689-751 61-117 (142)
150 2vpb_A Hpygo1, pygopus homolog 95.1 0.0048 1.7E-07 53.2 0.8 34 1035-1068 6-41 (65)
151 3dsq_A Pyrrolysyl-tRNA synthet 95.0 0.022 7.5E-07 63.0 5.7 117 287-434 147-266 (288)
152 1wem_A Death associated transc 94.9 0.0085 2.9E-07 53.0 1.8 32 1039-1070 17-48 (76)
153 2xb1_A Pygopus homolog 2, B-ce 94.8 0.0099 3.4E-07 56.0 2.1 34 1037-1070 3-38 (105)
154 1wep_A PHF8; structural genomi 94.6 0.015 5.1E-07 51.9 2.7 53 692-752 12-64 (79)
155 2ri7_A Nucleosome-remodeling f 94.6 0.0062 2.1E-07 62.2 -0.0 54 689-751 6-59 (174)
156 2xb1_A Pygopus homolog 2, B-ce 94.5 0.012 4.2E-07 55.4 1.8 59 691-752 3-62 (105)
157 3ql9_A Transcriptional regulat 94.2 0.041 1.4E-06 53.6 4.8 57 689-751 55-111 (129)
158 1wep_A PHF8; structural genomi 94.1 0.013 4.5E-07 52.2 1.1 32 1039-1070 13-45 (79)
159 3kqi_A GRC5, PHD finger protei 94.0 0.015 5E-07 51.5 1.2 54 689-750 7-60 (75)
160 1wem_A Death associated transc 94.0 0.017 5.7E-07 51.1 1.5 54 693-751 17-70 (76)
161 3kqi_A GRC5, PHD finger protei 94.0 0.013 4.5E-07 51.8 0.8 39 1037-1075 9-48 (75)
162 2rsd_A E3 SUMO-protein ligase 93.9 0.043 1.5E-06 47.5 3.9 31 1038-1068 10-42 (68)
163 3ql9_A Transcriptional regulat 93.7 0.0038 1.3E-07 60.9 -3.4 42 1037-1081 57-105 (129)
164 1b7y_A Phers, protein (phenyla 93.6 0.47 1.6E-05 53.7 13.0 146 19-184 171-324 (350)
165 1wew_A DNA-binding family prot 93.6 0.027 9.2E-07 50.1 2.1 35 1036-1071 15-51 (78)
166 3lqh_A Histone-lysine N-methyl 93.1 0.033 1.1E-06 57.6 2.2 57 546-618 3-64 (183)
167 2du3_A O-phosphoseryl-tRNA syn 92.5 0.39 1.3E-05 57.1 10.6 145 21-186 181-337 (534)
168 1wil_A KIAA1045 protein; ring 91.6 0.04 1.4E-06 49.3 0.4 35 1035-1070 13-47 (89)
169 1wil_A KIAA1045 protein; ring 91.4 0.07 2.4E-06 47.7 1.9 68 681-751 5-76 (89)
170 1nnh_A Asparaginyl-tRNA synthe 91.2 0.37 1.3E-05 53.3 7.9 70 16-100 65-137 (294)
171 2rhq_A Phenylalanyl-tRNA synth 90.6 1.5 5E-05 48.4 12.0 79 19-113 108-187 (294)
172 1wyd_A Hypothetical aspartyl-t 90.4 0.33 1.1E-05 56.6 6.7 73 12-100 173-246 (429)
173 1h4v_B Histidyl-tRNA synthetas 89.8 0.16 5.5E-06 58.6 3.5 65 284-354 96-162 (421)
174 4bbq_A Lysine-specific demethy 89.0 0.09 3.1E-06 50.0 0.5 44 1035-1078 57-101 (117)
175 3a74_A Lysyl-tRNA synthetase; 88.6 0.42 1.4E-05 56.6 5.9 71 15-100 218-288 (493)
176 1x54_A Asparaginyl-tRNA synthe 88.5 0.46 1.6E-05 55.4 6.1 72 13-100 175-247 (434)
177 3lqh_A Histone-lysine N-methyl 88.4 0.26 8.9E-06 50.8 3.5 59 692-752 3-64 (183)
178 3a5y_A GENX, putative lysyl-tR 87.9 0.33 1.1E-05 55.0 4.2 67 19-100 89-155 (345)
179 1eov_A ASPRS, aspartyl-tRNA sy 87.7 0.94 3.2E-05 53.6 8.1 81 12-107 217-300 (487)
180 3pco_A Phenylalanyl-tRNA synth 87.5 2.5 8.6E-05 47.4 11.1 125 41-186 179-306 (327)
181 1e1o_A Lysyl-tRNA synthetase, 87.4 0.29 9.9E-06 58.1 3.6 71 15-100 227-297 (504)
182 4e51_A Histidine--tRNA ligase; 87.2 0.28 9.6E-06 57.7 3.3 126 200-355 50-192 (467)
183 1wu7_A Histidyl-tRNA synthetas 87.0 0.4 1.4E-05 55.7 4.4 64 287-356 97-163 (434)
184 4bbq_A Lysine-specific demethy 86.3 0.23 7.9E-06 47.2 1.6 43 705-751 72-114 (117)
185 2xgt_A Asparaginyl-tRNA synthe 85.3 0.96 3.3E-05 52.7 6.4 69 17-101 176-245 (435)
186 3kv4_A PHD finger protein 8; e 84.5 0.13 4.4E-06 60.1 -1.4 53 691-751 4-56 (447)
187 1n9w_A Aspartyl-tRNA synthetas 84.0 0.92 3.1E-05 52.7 5.5 73 13-100 165-238 (422)
188 3kv5_D JMJC domain-containing 83.8 0.22 7.4E-06 59.0 0.1 53 690-750 35-87 (488)
189 3pfq_A PKC-B, PKC-beta, protei 83.5 0.47 1.6E-05 58.2 3.0 90 631-724 49-146 (674)
190 3bju_A Lysyl-tRNA synthetase; 83.2 0.61 2.1E-05 55.6 3.6 70 16-100 221-290 (521)
191 4ah6_A Aspartate--tRNA ligase, 83.1 0.77 2.6E-05 55.7 4.5 44 48-99 218-261 (617)
192 3pur_A Lysine-specific demethy 82.8 0.57 1.9E-05 55.4 3.0 40 704-750 54-93 (528)
193 1c0a_A Aspartyl tRNA synthetas 82.3 0.91 3.1E-05 54.9 4.7 46 48-101 208-253 (585)
194 1l0w_A Aspartyl-tRNA synthetas 82.2 0.9 3.1E-05 54.9 4.6 45 48-100 214-258 (580)
195 3kv5_D JMJC domain-containing 82.2 0.25 8.7E-06 58.4 -0.2 34 1037-1070 36-70 (488)
196 2ri7_A Nucleosome-remodeling f 80.3 0.46 1.6E-05 48.3 1.0 54 543-617 6-59 (174)
197 3nem_A Aspartyl-tRNA synthetas 80.2 2.2 7.7E-05 49.7 6.8 73 16-101 180-252 (438)
198 4ex5_A Lysine--tRNA ligase; st 79.6 0.97 3.3E-05 53.9 3.6 69 17-100 250-318 (529)
199 2odr_B Phosphoseryl-tRNA synth 78.7 17 0.00059 43.9 13.8 145 21-185 200-347 (648)
200 2odr_A Phosphoseryl-tRNA synth 78.5 18 0.00061 43.9 13.8 145 21-185 200-347 (665)
201 2odr_D Phosphoseryl-tRNA synth 78.2 18 0.00063 43.8 13.8 144 21-184 200-346 (685)
202 3qtc_A Pyrrolysyl-tRNA synthet 75.1 2.5 8.5E-05 46.4 5.0 57 290-354 157-213 (290)
203 2odr_C Phosphoseryl-tRNA synth 75.0 20 0.00069 43.6 13.0 144 22-185 201-347 (701)
204 2du7_A O-phosphoseryl-tRNA syn 74.6 17 0.00059 43.3 12.2 144 22-185 194-340 (549)
205 3m4p_A Ehasnrs, asparaginyl-tR 72.6 4.6 0.00016 47.3 6.7 70 17-101 200-269 (456)
206 1htt_A Histidyl-tRNA synthetas 71.0 3.6 0.00012 47.3 5.3 65 285-355 97-164 (423)
207 1ptq_A Protein kinase C delta 68.2 2.7 9.3E-05 33.4 2.5 37 689-725 9-45 (50)
208 2zet_C Melanophilin; complex, 66.2 2.3 7.8E-05 42.6 1.9 51 690-751 67-117 (153)
209 2enn_A NPKC-theta, protein kin 65.7 3.4 0.00012 36.3 2.8 38 688-725 31-68 (77)
210 1z7m_A ATP phosphoribosyltrans 65.2 5.8 0.0002 44.6 5.3 62 287-354 115-178 (344)
211 2yuu_A NPKC-delta, protein kin 63.7 5.3 0.00018 35.6 3.7 37 689-725 26-62 (83)
212 2enz_A NPKC-theta, protein kin 63.3 4.6 0.00016 34.2 3.1 37 689-725 21-57 (65)
213 1y8f_A UNC-13 homolog A, MUNC1 61.2 5.2 0.00018 34.0 3.0 37 689-725 22-58 (66)
214 3uej_A NPKC-delta, protein kin 61.0 4.3 0.00015 34.4 2.5 37 689-725 18-54 (65)
215 3i7f_A Aspartyl-tRNA synthetas 60.8 6.5 0.00022 47.0 4.8 72 16-100 287-358 (548)
216 1zbd_B Rabphilin-3A; G protein 59.9 6.1 0.00021 38.6 3.6 55 689-751 53-107 (134)
217 2eli_A Protein kinase C alpha 57.6 7.2 0.00025 34.9 3.4 37 689-725 26-62 (85)
218 1faq_A RAF-1; transferase, ser 56.6 5.4 0.00019 32.0 2.3 33 689-725 12-44 (52)
219 4b6d_A RAC GTPase-activating p 56.3 4.9 0.00017 33.9 2.0 36 690-726 18-53 (61)
220 1weq_A PHD finger protein 7; s 54.9 10 0.00035 34.2 3.9 36 705-751 43-79 (85)
221 3kv4_A PHD finger protein 8; e 52.6 2.7 9.4E-05 49.0 -0.2 54 544-618 4-57 (447)
222 3rac_A Histidine-tRNA ligase; 52.3 12 0.00042 42.4 5.1 65 287-354 115-185 (373)
223 2fnf_X Putative RAS effector N 50.8 9 0.00031 33.3 2.8 34 689-725 33-66 (72)
224 2e5p_A Protein PHF1, PHD finge 50.3 3.7 0.00013 35.1 0.2 52 636-688 2-60 (68)
225 3pur_A Lysine-specific demethy 47.8 7.6 0.00026 46.0 2.5 45 556-618 51-95 (528)
226 1iym_A EL5; ring-H2 finger, ub 47.3 12 0.00041 29.6 2.9 35 689-724 3-37 (55)
227 3lc0_A Histidyl-tRNA synthetas 45.8 20 0.00067 41.9 5.6 60 287-354 121-186 (456)
228 2db6_A SH3 and cysteine rich d 44.7 3.9 0.00013 35.7 -0.4 38 689-726 26-63 (74)
229 3od1_A ATP phosphoribosyltrans 44.0 20 0.00068 41.1 5.1 60 287-354 101-164 (400)
230 2e5q_A PHD finger protein 19; 44.0 2.9 9.9E-05 35.3 -1.3 41 647-688 15-58 (63)
231 1r79_A Diacylglycerol kinase, 43.6 10 0.00035 34.1 2.1 38 689-726 36-74 (84)
232 2csz_A Synaptotagmin-like prot 41.5 11 0.00039 33.2 2.0 52 688-751 22-73 (76)
233 1rfh_A RAS association (ralgds 40.6 8.2 0.00028 32.2 0.9 34 689-725 20-53 (59)
234 4g84_A Histidine--tRNA ligase, 39.4 15 0.00052 42.5 3.3 63 290-357 106-170 (464)
235 1e4u_A Transcriptional repress 38.2 11 0.00039 33.0 1.5 37 688-725 8-44 (78)
236 3l4g_A Phenylalanyl-tRNA synth 35.9 47 0.0016 39.3 6.7 143 290-471 349-492 (508)
237 1x3c_A Zinc finger protein 292 35.5 23 0.00079 31.0 2.9 42 517-563 3-47 (73)
238 2vrw_B P95VAV, VAV1, proto-onc 35.0 21 0.00072 40.5 3.5 37 689-725 355-391 (406)
239 1x4j_A Ring finger protein 38; 34.9 18 0.00063 30.7 2.3 36 688-725 20-55 (75)
240 3pfq_A PKC-B, PKC-beta, protei 33.6 20 0.00067 43.8 3.1 107 537-663 39-146 (674)
241 2eqj_A Metal-response element- 33.4 5.3 0.00018 34.3 -1.4 32 656-688 33-64 (66)
242 3net_A Histidyl-tRNA synthetas 33.3 41 0.0014 39.2 5.6 61 288-354 119-183 (465)
243 2ebq_A Nuclear pore complex pr 33.2 21 0.00073 28.6 2.2 30 733-762 2-33 (47)
244 4hcz_A PHD finger protein 1; p 33.0 5.3 0.00018 33.3 -1.4 41 647-688 11-54 (58)
245 2du3_A O-phosphoseryl-tRNA syn 32.2 78 0.0027 37.7 7.7 82 311-400 227-319 (534)
246 2xk0_A Polycomb protein PCL; t 31.1 6.9 0.00024 33.7 -1.0 41 647-689 23-65 (69)
247 3k1l_B Fancl; UBC, ring, RWD, 30.9 49 0.0017 37.3 5.3 55 1019-1073 285-349 (381)
248 2row_A RHO-associated protein 30.4 18 0.0006 32.6 1.4 36 689-724 33-70 (84)
249 2ecm_A Ring finger and CHY zin 30.1 30 0.001 27.2 2.6 35 690-725 4-38 (55)
250 2ecl_A Ring-box protein 2; RNF 30.1 19 0.00065 31.4 1.6 36 690-725 14-59 (81)
251 3ky9_A Proto-oncogene VAV; cal 29.8 28 0.00097 41.7 3.6 38 688-725 526-563 (587)
252 2d8s_A Cellular modulator of i 29.1 21 0.00073 31.5 1.7 35 689-724 13-50 (80)
253 2ku7_A MLL1 PHD3-CYP33 RRM chi 28.8 12 0.0004 35.4 -0.0 43 707-751 1-44 (140)
254 3o36_A Transcription intermedi 27.8 18 0.0006 36.8 1.1 27 631-662 5-31 (184)
255 4g85_A Histidine-tRNA ligase, 26.8 47 0.0016 39.1 4.7 61 290-357 159-223 (517)
256 2kiz_A E3 ubiquitin-protein li 26.5 33 0.0011 28.5 2.4 36 688-725 11-46 (69)
257 1b7y_A Phers, protein (phenyla 26.2 1.1E+02 0.0039 34.2 7.5 87 290-389 195-285 (350)
258 3rsn_A SET1/ASH2 histone methy 25.4 41 0.0014 34.3 3.2 31 696-727 9-39 (177)
259 3iuf_A Zinc finger protein UBI 25.2 5.5 0.00019 30.7 -2.6 23 541-563 2-25 (48)
260 2m0o_A PHD finger protein 1; t 25.1 8.8 0.0003 33.7 -1.5 40 647-687 34-76 (79)
261 1kbe_A Kinase suppressor of RA 25.1 38 0.0013 27.2 2.4 29 692-724 15-43 (49)
262 2l0b_A E3 ubiquitin-protein li 25.0 34 0.0012 30.4 2.4 36 687-724 36-71 (91)
263 2d8s_A Cellular modulator of i 25.0 49 0.0017 29.1 3.3 40 541-591 11-50 (80)
264 3u5n_A E3 ubiquitin-protein li 24.6 19 0.00064 37.4 0.6 27 631-662 8-34 (207)
265 1v5n_A PDI-like hypothetical p 23.4 32 0.0011 31.0 1.8 33 692-727 48-80 (89)
266 1weo_A Cellulose synthase, cat 22.9 17 0.00058 32.9 -0.1 51 691-752 16-68 (93)
267 1vyx_A ORF K3, K3RING; zinc-bi 22.6 10 0.00035 31.6 -1.5 35 689-725 4-40 (60)
268 2ct0_A Non-SMC element 1 homol 22.4 32 0.0011 30.1 1.5 32 690-725 14-45 (74)
269 1x3z_A Peptide: N-glycanase; h 22.3 1.1E+02 0.0039 34.1 6.2 51 334-392 185-235 (335)
270 2xi5_A RNA polymerase L, L-pro 21.2 1.4E+02 0.0049 30.1 6.1 50 70-120 82-131 (184)
271 4a0k_B E3 ubiquitin-protein li 21.0 22 0.00077 33.8 0.3 32 691-722 48-92 (117)
272 2ebr_A Nuclear pore complex pr 20.9 58 0.002 26.1 2.6 27 736-762 5-33 (47)
273 2du7_A O-phosphoseryl-tRNA syn 20.8 1.4E+02 0.0049 35.5 7.1 82 311-400 239-323 (549)
274 3cmq_A Phenylalanyl-tRNA synth 20.5 5.1E+02 0.018 29.6 11.6 82 92-184 200-285 (415)
275 2ct0_A Non-SMC element 1 homol 20.5 29 0.00098 30.3 0.8 32 1035-1068 13-44 (74)
276 2rhq_B Phenylalanyl-tRNA synth 20.4 2E+02 0.0067 36.0 8.6 86 22-117 548-639 (795)
277 3k1l_B Fancl; UBC, ring, RWD, 20.3 45 0.0015 37.6 2.5 36 689-724 306-344 (381)
278 2ect_A Ring finger protein 126 20.2 65 0.0022 27.3 3.1 34 689-724 13-46 (78)
No 1
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens}
Probab=100.00 E-value=7e-61 Score=562.54 Aligned_cols=285 Identities=52% Similarity=0.811 Sum_probs=221.3
Q ss_pred CCeeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeec----
Q psy11602 193 ETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQF---- 268 (1083)
Q Consensus 193 ~~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qf---- 268 (1083)
+.|++|..+|..|+.+.+. .+||++|.+|++++.+. +.+.++.+.+.+ .+|++...
T Consensus 198 p~GarL~raL~~f~~d~~~-~~Gy~EV~~P~lv~~el----------------~~~sG~l~~f~e---emy~v~~~g~~~ 257 (522)
T 3vbb_A 198 GVLVFLEQALIQYALRTLG-SRGYIPIYTPFFMRKEV----------------MQEVAQLSQFDE---ELYKVIGKGSEK 257 (522)
T ss_dssp THHHHHHHHHHHHHHHHHH-HTTCEEEECCSEEEHHH----------------HHHHSCCC-CCS---CCCEEC------
T ss_pred CHHHHHHHHHHHHHHHHHH-HcCCEEEECCcccchHH----------------HhhcCCcccCcc---cceEeecCCccc
Confidence 4577888899999999885 89999999999999444 455556677766 46665421
Q ss_pred -------c----ceEEEEeeCCCCCc--chhhhh-hhhcccccccc-----cccCcCceeEEEeeeEEEEEEeCCCchhH
Q psy11602 269 -------E----KVEQFVLTSPHDDE--SWKMLD-EMIQNSEEFYA-----DLDTRGIFRVHQFEKVEQFVLTSPHDDES 329 (1083)
Q Consensus 269 -------d----~~~~~~~~~~~~~~--s~~~~~-~~~~~~~~~~~-----~~~trGl~Rvhqf~kvE~f~~~~~~~~~s 329 (1083)
+ ++..++++..+.++ ||++|| ++++.+.|||+ |++++||||||||+|||+|.||+|++++|
T Consensus 258 ~~~~~~~~l~L~PTaE~~l~~l~~~ei~s~~dLPlr~~~~s~cFR~Eags~GrdtrGL~RvhQF~kvE~~~f~~pe~e~s 337 (522)
T 3vbb_A 258 SDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKS 337 (522)
T ss_dssp ------CCEEECSSTHHHHHTTSTTCEECTTTCCEEEEEEEEEECSCCCC----CCCSSSCSEEEEEEEEEEECSSTTHH
T ss_pred cccccCcceeEcccCcHHHHHHHhhhecccccCCeeEEEecccccCCCCcCCccCCCcceeeeeEEEEEEEEeCCChHHH
Confidence 1 55566666766665 889999 99999999996 57999999999999999999999976669
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCC
Q psy11602 330 WKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMN 409 (1083)
Q Consensus 330 ~~~~e~~~~~~e~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~ 409 (1083)
+++|++|+.++++||+.||||||||.+|+||||++|+++||||||||++++|+||+|||||+||||||++|||++.+..+
T Consensus 338 ~~e~e~ml~~~e~il~~LGLpyrvv~l~tgdlg~~asktyDiE~w~P~~~~y~EIsScSnc~DyqArr~~iry~~~~~~~ 417 (522)
T 3vbb_A 338 WEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMM 417 (522)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECCGGGCCTTCSEEEEEEEEETTTTEEEEEEEEEECTTHHHHHHTCEESCC---C
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEEEcCCccCCCchhheeceeEecCCCCceeEEEEecCCCCCccceeeeEEccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999753335
Q ss_pred CceeeEEeecccccchhHHHHHHHhhccCCCceecCccccccCCCcccCCCcccCCCCCCCCChhhHHHHHhhhhccccc
Q psy11602 410 EKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 489 (1083)
Q Consensus 410 ~~~~~~htln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~~~~~~~~~~~~~~~~~~p~D~e~~~~~kk~k~~~kk~ 489 (1083)
++.+|||||||||+|++|+|+|||||||++|||+||++|+|||++.+ .++|||++++|+|.+.+++++|+++++||+
T Consensus 418 ~k~~~vhtlNgs~lav~R~l~AiLEn~q~~dGi~iP~~L~Py~~~~~---~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (522)
T 3vbb_A 418 DKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPGL---QELIPFVKPAPIEQEPSKKQKKQHEGSKKK 494 (522)
T ss_dssp CCCCBCEEEEEEEEEHHHHHHHHHHHHBCSSEEECCHHHHTTSCTTS---SSEEECCSCCCC------------------
T ss_pred CCeeeceEEeccchHHHHHHHHHHHhCCCCCCeecChHhcCeeCCCc---ceEeecCCCCCcchhHHHHhhhhhcccccc
Confidence 67899999999999999999999999999999999999999999765 256999999999999999888888888777
Q ss_pred cchhhHhhhhh
Q psy11602 490 VLIDEAMIQNE 500 (1083)
Q Consensus 490 ~~~~~~~~~~~ 500 (1083)
...+...+++.
T Consensus 495 ~~~~~~~~~~~ 505 (522)
T 3vbb_A 495 AAARDVTLENR 505 (522)
T ss_dssp -----------
T ss_pred ccccchhhhHH
Confidence 76665444443
No 2
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=100.00 E-value=2.6e-57 Score=529.60 Aligned_cols=255 Identities=42% Similarity=0.665 Sum_probs=219.0
Q ss_pred CCeeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc---
Q psy11602 193 ETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE--- 269 (1083)
Q Consensus 193 ~~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd--- 269 (1083)
+.|++|..+|..|+.+.+. .+||++|.+|++++.+.+ .+.++.+.+++ .+|++...+
T Consensus 205 p~GarL~~aL~~f~~d~~~-~~Gy~eV~~P~lv~~~l~----------------~~sG~~~~f~e---~mf~v~~~~~~~ 264 (484)
T 3lss_A 205 GGLVQLQVALVSYSLDFLV-KRGYTPFYPPFFLNRDVM----------------GEVAQLSQFDE---ELYQVSGDGDKK 264 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTTCEEEECCSEEEHHHH----------------HHHSCHHHHHH---TCCEEESSSSCE
T ss_pred CHHHHHHHHHHHHHHHHHH-HcCCEEEecCccccHHHH----------------HhcCCcccccc---cceEeecCCcce
Confidence 3467778899999999885 899999999999995555 44556666666 577665311
Q ss_pred ---ceEEEEeeCCCCCc--chhhhh-hhhcccccccc-----cccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHH
Q psy11602 270 ---KVEQFVLTSPHDDE--SWKMLD-EMIQNSEEFYA-----DLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQ 338 (1083)
Q Consensus 270 ---~~~~~~~~~~~~~~--s~~~~~-~~~~~~~~~~~-----~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~ 338 (1083)
++..++++..+.++ ||++|| ++++.+.|||. |++|+||||||||+|||+|.||+|++++|+++|++|++
T Consensus 265 ~L~PTaE~~l~~l~~~~i~sy~dLPlr~~~~s~cFR~Eags~Grdt~GL~RvrqF~kvE~~~f~~pe~~~s~~e~e~~~~ 344 (484)
T 3lss_A 265 YLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMIT 344 (484)
T ss_dssp EECSSTHHHHHHHTTTCEESCCSSCEEEEEEEEEECCCTTCSSSCCSTTSSCSEEEEEEEEEEECSSTTHHHHHHHHHHH
T ss_pred EEeccCcHHHHHHHhccccchhhCCeeEEeecCccCCCCCcCCcccCCcceeeeEEEEEEEEEeCcchHHHHHHHHHHHH
Confidence 55556666666554 789999 99999999995 67999999999999999999999965559999999999
Q ss_pred HHHHHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEeccc---CCCCceeeE
Q psy11602 339 NSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTK---KMNEKIEFV 415 (1083)
Q Consensus 339 ~~e~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~---~~~~~~~~~ 415 (1083)
++++||+.||||||||.+|+||||++|+++||||||||++++|+||+|||||+||||||++|||++.+ ..+++.+||
T Consensus 345 ~~e~il~~LGLpyrvv~l~tgdlg~~a~~~yDiE~w~P~~~~~~EIsS~Snc~dyqArr~~iry~~~~~~~~~~~~~~~v 424 (484)
T 3lss_A 345 TSEEFNKSLGLPYRVVNICSGALNNAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVKEYC 424 (484)
T ss_dssp HHHHHHHHHTCCEEEEECCTTTCCSSCSEEEEEEEEETTTTEEEEEEEEEECTTHHHHHHTCEESSCCC----CCSCEEC
T ss_pred HHHHHHHHcCCcEEEEEcCCcccCCchhheechheecCCCCCeeEEEEecCcccccccccceEEeccccccccCCCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999763 124578999
Q ss_pred EeecccccchhHHHHHHHhhccCCCceecCccccccCCCcccCCCcccCCCCCCCCC
Q psy11602 416 HMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPID 472 (1083)
Q Consensus 416 htln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~~~~~~~~~~~~~~~~~~p~D 472 (1083)
||||||++|++|+|+|||||||++|||+||++|+|||||. +.|||++++|+|
T Consensus 425 htlNgt~~av~R~l~AiLEn~q~~dGi~iP~~L~pym~g~-----~~i~~~~~~~~~ 476 (484)
T 3lss_A 425 HMLNGTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGI-----EMIRFENNAQAE 476 (484)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHBCSSEEECCGGGGGGTTTC-----CEEECCCC----
T ss_pred eEEeccchHHHHHHHHHHHhcCCCCCeeCChhhcCccCCc-----ceeecCccCCcc
Confidence 9999999999999999999999999999999999999754 569999999987
No 3
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=100.00 E-value=3.3e-57 Score=528.18 Aligned_cols=259 Identities=41% Similarity=0.671 Sum_probs=221.3
Q ss_pred CCCeeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeec--c
Q psy11602 192 TETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQF--E 269 (1083)
Q Consensus 192 ~~~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qf--d 269 (1083)
.+.|++|..+|..|+.+.+. ..||++|.+|++++.+++ .+.++.+.+++ .+|++... +
T Consensus 181 ~p~GarL~~aL~~~~~d~~~-~~Gy~eV~~P~lv~~~l~----------------~~sG~l~~f~e---emf~v~~~~~~ 240 (485)
T 3qne_A 181 RNYGVFLNQALINYGLSFLS-SKGYVPLQAPVMMNKEVM----------------AKTAQLSQFDE---ELYKVIDGEDE 240 (485)
T ss_dssp CTHHHHHHHHHHHHHHHHHH-TTTCEEEECCSEEEHHHH----------------HHHSCHHHHTT---TCCEEEETTEE
T ss_pred ecHHHHHHHHHHHHHHHHHH-HcCCEEEeCCccccHHHH----------------hhcCCcccccc---ceEEEeCCCCe
Confidence 34578888899999999885 899999999999995544 45556666666 57776531 1
Q ss_pred ----ceEEEEeeCCCCCc---c-hhhhh-hhhcccccccc-----cccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHH
Q psy11602 270 ----KVEQFVLTSPHDDE---S-WKMLD-EMIQNSEEFYA-----DLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDE 335 (1083)
Q Consensus 270 ----~~~~~~~~~~~~~~---s-~~~~~-~~~~~~~~~~~-----~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~ 335 (1083)
++++++++..+.++ | |++|| ++++.+.|||. |++++||+|||||+|||+|.||+| ++|+++|++
T Consensus 241 ~~LipTaE~pl~~l~~~ei~~S~y~dLPlr~~~~s~cfR~Eag~~Grdt~GL~RvhqF~kvE~~~f~~p--e~s~~e~e~ 318 (485)
T 3qne_A 241 KYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEP--EKSWEEFDR 318 (485)
T ss_dssp EEECSSTHHHHHHHTTTCEESSHHHHCCEEEEEEEEEECSCCC-----CCSSSSCSEEEEEEEEEEECG--GGHHHHHHH
T ss_pred EEEeccccHHHHHHHhccccccchhcCCeeEEEecccccCCCCCCCccCCCceeeeeeeeeeEEEEeCH--HHHHHHHHH
Confidence 66667777777775 4 99999 99999999996 579999999999999999999999 689999999
Q ss_pred HHHHHHHHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeE
Q psy11602 336 MIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFV 415 (1083)
Q Consensus 336 ~~~~~e~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~ 415 (1083)
|++++++||+.||||||||.+|+||||++|+++||||||||++++|+||+|||||+||||||++|||++.+..+++.+||
T Consensus 319 ml~~~e~il~~LgLpyrvv~~~tgdlg~~a~~tyDiE~w~P~~~~~~Eiss~Snc~dyqArr~~iry~~~~~~~~~~~~v 398 (485)
T 3qne_A 319 MIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYV 398 (485)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCGGGCCTTCSEEEEEEEEETTTTEEEEEEEEEECTTHHHHHTTCEECC------CCCBC
T ss_pred HHHHHHHHHHHCCCcEEEEEcCCcccCCchhhheeeeEeccCCCceeEEEEecCCcCccccccceEEecccccCCCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999763224678999
Q ss_pred EeecccccchhHHHHHHHhhccCCCceecCccccccCCCcccCCCcccCCCCCCCCChhhH
Q psy11602 416 HMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476 (1083)
Q Consensus 416 htln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~~~~~~~~~~~~~~~~~~p~D~e~~ 476 (1083)
|||||||+|++|+|+|||||||++|||+||++|+|||+|.+ +.|||++++|+|...+
T Consensus 399 htlNgt~lav~R~l~AiLEn~q~~dGi~iP~~L~py~~g~~----~~i~~~~~~~~~~~~~ 455 (485)
T 3qne_A 399 HCLNSTLSATERTICCILENYQKEDGLVIPEVLRKYIPGEP----EFIPYIKELPKNTTSV 455 (485)
T ss_dssp EEEEEEEEEHHHHHHHHHHHSEETTEEECCHHHHTTSTTCC----SEEECCCCCSSCC---
T ss_pred EEEecchhHHHHHHHHHHHhcCCCCceecChhhcCccCCcc----eEeeccccCCcccccc
Confidence 99999999999999999999999999999999999998653 5699999999995544
No 4
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens}
Probab=100.00 E-value=4.8e-52 Score=487.73 Aligned_cols=224 Identities=71% Similarity=1.173 Sum_probs=190.3
Q ss_pred CCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHH
Q psy11602 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKML 96 (1083)
Q Consensus 17 ~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~ 96 (1083)
.+++++|+||+|+++++||+++++||++|||+|||+++|||+|++++|++++||+|+|||+|+|+|+|++|+.++|++.|
T Consensus 262 ~~~~l~L~PTaE~~l~~l~~~ei~s~~dLPlr~~~~s~cFR~Eags~GrdtrGL~RvhQF~kvE~~~f~~pe~e~s~~e~ 341 (522)
T 3vbb_A 262 SYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMF 341 (522)
T ss_dssp --CCEEECSSTHHHHHTTSTTCEECTTTCCEEEEEEEEEECSCCCC----CCCSSSCSEEEEEEEEEEECSSTTHHHHHH
T ss_pred cCcceeEcccCcHHHHHHHhhhecccccCCeeEEEecccccCCCCcCCccCCCcceeeeeEEEEEEEEeCCChHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999855799999
Q ss_pred HHHHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccC---CC---
Q psy11602 97 DEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT---KQ--- 170 (1083)
Q Consensus 97 ~~~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~---~~--- 170 (1083)
++|+++|++||+.||||||+|.+++||||++++++||||+|||+.++|+||+|||||+||||||++|+|++. ++
T Consensus 342 e~ml~~~e~il~~LGLpyrvv~l~tgdlg~~asktyDiE~w~P~~~~y~EIsScSnc~DyqArr~~iry~~~~~~~~k~~ 421 (522)
T 3vbb_A 342 EEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVE 421 (522)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCGGGCCTTCSEEEEEEEEETTTTEEEEEEEEEECTTHHHHHHTCEESCC---CCCCC
T ss_pred HHHHHHHHHHHHHcCCceEEEEcCCccCCCchhheeceeEecCCCCceeEEEEecCCCCCccceeeeEEccccccCCCee
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 22
Q ss_pred ---ccccccccchhheeheeccccCCCeeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchh
Q psy11602 171 ---KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKK 243 (1083)
Q Consensus 171 ---~~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~ 243 (1083)
++|+||+|++|+|+|||||||+++||+||++|+|||+.+.. .++|++.+.|+..+..++++|+.+++++.
T Consensus 422 ~vhtlNgs~lav~R~l~AiLEn~q~~dGi~iP~~L~Py~~~~~~---~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (522)
T 3vbb_A 422 FVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPGLQ---ELIPFVKPAPIEQEPSKKQKKQHEGSKKK 494 (522)
T ss_dssp BCEEEEEEEEEHHHHHHHHHHHHBCSSEEECCHHHHTTSCTTSS---SEEECCSCCCC------------------
T ss_pred eceEEeccchHHHHHHHHHHHhCCCCCCeecChHhcCeeCCCcc---eEeecCCCCCcchhHHHHhhhhhcccccc
Confidence 28999999999999999999999999999999999976542 37899999999988887777666655443
No 5
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A
Probab=100.00 E-value=3.4e-52 Score=495.09 Aligned_cols=242 Identities=27% Similarity=0.470 Sum_probs=214.8
Q ss_pred CCeeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc---
Q psy11602 193 ETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE--- 269 (1083)
Q Consensus 193 ~~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd--- 269 (1083)
+.|++|..+|..|+.+.+. .+||++|.+|++++ .....+.++.+.+++ .+|++...+
T Consensus 272 p~Ga~l~~aL~~~~~~~~~-~~Gy~ev~~P~lv~----------------~~l~~~sG~~~~f~e---~mf~~~~~~~~L 331 (536)
T 3err_A 272 GDLALYELALLRFAMDFMA-RRGFLPMTLPSYAR----------------EKAFLGTGHFPAYRD---QVWAIAETDLYL 331 (536)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTTCEEEECCSEEE----------------HHHHHHHTCTTTTGG---GCCEETTTTEEE
T ss_pred CHHHHHHHHHHHHHHHHHH-HcCCEEEecccccc----------------HHHHHhcCCcccChh---hceEecCCCEEE
Confidence 3467777899999999885 79999999999999 444555667777777 577765422
Q ss_pred -ceEEEEeeCCCCCc--chhhhh-hhhcccccccc-----cccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHH
Q psy11602 270 -KVEQFVLTSPHDDE--SWKMLD-EMIQNSEEFYA-----DLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNS 340 (1083)
Q Consensus 270 -~~~~~~~~~~~~~~--s~~~~~-~~~~~~~~~~~-----~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~ 340 (1083)
++..++++..+.++ ||++|| ++++.+.|||. |++++||+|||||+|||+|.||+|+.++|+++|++|++++
T Consensus 332 ~PT~E~~~~~l~~~~i~s~~~LPlr~~~~~~~fR~E~gs~Gr~~~GL~RvrqF~k~e~~~f~~pe~e~s~~~~e~~~~~~ 411 (536)
T 3err_A 332 TGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENA 411 (536)
T ss_dssp CSSTHHHHHHHTTTCEEEGGGCSEEEEEEEEEECCCTTCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHhcccccHhhCCeeEEEecccccCCccccCCCCCCceeeeeeEEEEEEEEECCchHHHHHHHHHHHHHH
Confidence 55555556555554 899999 99999999995 5799999999999999999999997569999999999999
Q ss_pred HHHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEeecc
Q psy11602 341 EEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420 (1083)
Q Consensus 341 e~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htln~ 420 (1083)
++||+.||||||||.+++||||++|+++||||+|||++++|+||+|||||+||||||++|||++. +++.+|||||||
T Consensus 412 ~~i~~~LgLpyrvv~~~tgdlg~~a~~~yDiE~w~p~~~~~~Ei~s~sn~~dyqarr~~iry~~~---~~k~~~vhtlng 488 (536)
T 3err_A 412 EEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDP---EGRVRYAYTLNN 488 (536)
T ss_dssp HHHHHHTTCCEEEEECCTTTSCTTCSEEEEEEEEEGGGTEEEEEEEEEEEETHHHHHHTCEEECT---TSCEEECEEEEE
T ss_pred HHHHHHcCCcEEEEEcCCcccCCChhheeeeeEecCCCCCeEEEEEecCccChhhcccCeEEECC---CCCeEeeeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999975 467899999999
Q ss_pred cccchhHHHHHHHhhccCCCc-eecCccccccCCCccc
Q psy11602 421 TACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYV 457 (1083)
Q Consensus 421 t~~a~~R~i~ailEn~q~~~G-i~iP~~L~py~~~~~~ 457 (1083)
||+|++|+|+|||||||++|| |+||++|+||||..++
T Consensus 489 s~~a~~R~l~ailen~q~~dg~i~iP~~L~py~g~~~~ 526 (536)
T 3err_A 489 TALATPRILAMLLENHQLQDGRVRVPQALIPYMGKEVL 526 (536)
T ss_dssp EEEEETHHHHHHHHHHBCTTSCEECCGGGHHHHTSSEE
T ss_pred cchhHHHHHHHHHHhcCCCCCcEeCChhhCCccCCccc
Confidence 999999999999999999999 9999999999986654
No 6
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=100.00 E-value=1e-49 Score=465.60 Aligned_cols=204 Identities=60% Similarity=1.003 Sum_probs=189.2
Q ss_pred CCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHH
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLD 97 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~ 97 (1083)
+++++|+||||+++++||+++++||++||++|||+++|||+|+||+||+++||+|+|||+|+|+|+|++|++++|+++|+
T Consensus 261 ~~~~~L~PTaE~~l~~l~~~~i~sy~dLPlr~~~~s~cFR~Eags~Grdt~GL~RvrqF~kvE~~~f~~pe~~~s~~e~e 340 (484)
T 3lss_A 261 GDKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLE 340 (484)
T ss_dssp SSCEEECSSTHHHHHHHTTTCEESCCSSCEEEEEEEEEECCCTTCSSSCCSTTSSCSEEEEEEEEEEECSSTTHHHHHHH
T ss_pred CcceEEeccCcHHHHHHHhccccchhhCCeeEEeecCccCCCCCcCCcccCCcceeeeEEEEEEEEEeCcchHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999998557999999
Q ss_pred HHHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCC------C-
Q psy11602 98 EMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK------Q- 170 (1083)
Q Consensus 98 ~~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~------~- 170 (1083)
+|+++|++||++||||||+|.+++||||++++++||||+|||+.++|+||+|||||+||||||++|+|++.+ +
T Consensus 341 ~~~~~~e~il~~LGLpyrvv~l~tgdlg~~a~~~yDiE~w~P~~~~~~EIsS~Snc~dyqArr~~iry~~~~~~~~~~~~ 420 (484)
T 3lss_A 341 DMITTSEEFNKSLGLPYRVVNICSGALNNAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNV 420 (484)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCTTTCCSSCSEEEEEEEEETTTTEEEEEEEEEECTTHHHHHHTCEESSCCC----CCS
T ss_pred HHHHHHHHHHHHcCCcEEEEEcCCcccCCchhheechheecCCCCCeeEEEEecCcccccccccceEEeccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998652 2
Q ss_pred -----ccccccccchhheeheeccccCCCeeEecccccccccccccCCCCccccccCcccc
Q psy11602 171 -----KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPID 226 (1083)
Q Consensus 171 -----~~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~ 226 (1083)
++|+||+|++|+|+|||||||+++||+||++|+|||++.- ++|++.+.|..
T Consensus 421 ~~~vhtlNgt~~av~R~l~AiLEn~q~~dGi~iP~~L~pym~g~~-----~i~~~~~~~~~ 476 (484)
T 3lss_A 421 KEYCHMLNGTLCAITRTMCCICENYQTEEGVVIPDVLRPYMMGIE-----MIRFENNAQAE 476 (484)
T ss_dssp CEECEEEEEEEEEHHHHHHHHHHHHBCSSEEECCGGGGGGTTTCC-----EEECCCC----
T ss_pred ceeeeEEeccchHHHHHHHHHHHhcCCCCCeeCChhhcCccCCcc-----eeecCccCCcc
Confidence 2899999999999999999999999999999999995432 56788888876
No 7
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=100.00 E-value=1.7e-50 Score=476.08 Aligned_cols=256 Identities=27% Similarity=0.474 Sum_probs=214.7
Q ss_pred CCeeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeec---c
Q psy11602 193 ETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQF---E 269 (1083)
Q Consensus 193 ~~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qf---d 269 (1083)
+.|++|..+|..|+.+.+. ..||++|.+|++++.++..+.+ +.+.+.+. .||++... +
T Consensus 216 p~GarL~~aL~~~~~d~~~-~~Gy~eV~~P~lv~~~l~~~sG----------------~~~~f~e~--emf~v~~~~~~~ 276 (501)
T 1wle_A 216 GAGALLQHGLVNFTLNKLI-HRGFTPMTVPDLLRGVVFEGCG----------------MTPNAKPS--QIYNIDPSRFED 276 (501)
T ss_dssp THHHHHHHHHHHHHHHHHH-HTTCEEEECCSEECHHHHHHHT----------------CCSSSSSC--SSCBBCTTTSSS
T ss_pred ChHHHHHHHHHHHHHHHHH-HcCCEEEeCCccccHHHHHhhc----------------CCCccCcc--ccEEEecCCCCe
Confidence 4577788899999999885 8999999999999966554444 44444431 24444321 1
Q ss_pred ----ceEEEEeeCCCCCc--chhhhh-hhhcccccccc----cccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHH
Q psy11602 270 ----KVEQFVLTSPHDDE--SWKMLD-EMIQNSEEFYA----DLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQ 338 (1083)
Q Consensus 270 ----~~~~~~~~~~~~~~--s~~~~~-~~~~~~~~~~~----~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~ 338 (1083)
++..++++..+.++ |+++|| ++++.+.|||. |++++||+|||||+|||+|.||+|+.++|+++|++|++
T Consensus 277 l~L~PTaE~~~~~l~~~~i~s~~~LPlrl~~~s~~FR~Ea~~G~d~~GL~RvhqF~kvE~~~f~~pe~e~s~~~~e~~l~ 356 (501)
T 1wle_A 277 LNLAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDTGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLS 356 (501)
T ss_dssp CEECSSHHHHHHHHHTTEEEEGGGCSEEEEEEEEEECCCCSCC--CCSSSSCSEEEEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred EEECCcCcHHHHHHHhhccCCcccCCeeEEeccCcccCCCCCCCCCcCceeeeeeeeeeEEEEeCCcHHHHHHHHHHHHH
Confidence 44444455444443 688999 99999999997 46799999999999999999999965699999999999
Q ss_pred HHHHHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEee
Q psy11602 339 NSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHML 418 (1083)
Q Consensus 339 ~~e~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htl 418 (1083)
++++||+.||||||||.+++||||++|+++||||||||+++.|+||+|||||+||||||++|||++. +++.+|||||
T Consensus 357 ~~~~il~~LgLpyrvv~l~tgdlg~~a~~~~DiE~w~p~~~~~~Ei~s~sn~~DfqarR~~iry~~~---~gk~~~vHtl 433 (501)
T 1wle_A 357 LQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTE---AGELQFAHTV 433 (501)
T ss_dssp HHHHHHHHTTCCEEEEECCGGGSTTTCSEEEEEEEEETTTTEEEEEEEEEECTTHHHHHHTCEEECS---SSCEEECEEE
T ss_pred HHHHHHHHCCCcEEEEEccCcccCCchhheecHhhcccccccceeEEeccccccchhhhcCcEEECC---CCCEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999975 4678899999
Q ss_pred cccccchhHHHHHHHhhccCCCc-eecCccccccCCCcccCCCcccCCCCCCCCChhhH
Q psy11602 419 NATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVYVNEAGEIPFVKTAPIDEEET 476 (1083)
Q Consensus 419 n~t~~a~~R~i~ailEn~q~~~G-i~iP~~L~py~~~~~~~~~~~~~~~~~~p~D~e~~ 476 (1083)
||||||++|+|+|||||||+++| |+||++|+||||.. .|++.+.+|+|++-.
T Consensus 434 ngSglav~R~l~alLEn~q~~dG~i~iP~~L~Py~g~~------~i~~~~~~~~~~~~~ 486 (501)
T 1wle_A 434 NATGCAVPRLLIALLESYQQKDGSVLVPPALQPYLGTD------RITTPTHVPLQYIGP 486 (501)
T ss_dssp EEEEEEHHHHHHHHHHHHBCTTSCEECCGGGHHHHSSS------EECCCSSCCCEECSS
T ss_pred CCccchHHHHHHHHHHhCCCCCCCEeCChhhcCccCcc------cccCcccCchhhcCC
Confidence 99999999999999999999999 99999999999733 365566788775543
No 8
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=100.00 E-value=9.9e-50 Score=465.27 Aligned_cols=211 Identities=58% Similarity=0.972 Sum_probs=186.7
Q ss_pred CCCeeEecCChHHHHHHHhcccCC--CCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHH
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLP--EASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKM 95 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s--~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~ 95 (1083)
+++++|+||+|++++.|+++++++ |++|||+|||+++|||+|+|++||+++||+|+|||+|+|+|+|++++ +|+++
T Consensus 238 ~~~~~LipTaE~pl~~l~~~ei~~S~y~dLPlr~~~~s~cfR~Eag~~Grdt~GL~RvhqF~kvE~~~f~~pe--~s~~e 315 (485)
T 3qne_A 238 EDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPE--KSWEE 315 (485)
T ss_dssp TEEEEECSSTHHHHHHHTTTCEESSHHHHCCEEEEEEEEEECSCCC-----CCSSSSCSEEEEEEEEEEECGG--GHHHH
T ss_pred CCeEEEeccccHHHHHHHhccccccchhcCCeeEEEecccccCCCCCCCccCCCceeeeeeeeeeEEEEeCHH--HHHHH
Confidence 467999999999999999999998 99999999999999999999999999999999999999999999986 49999
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccC---CC--
Q psy11602 96 LDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT---KQ-- 170 (1083)
Q Consensus 96 ~~~~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~---~~-- 170 (1083)
|++|+++|++||+.||||||+|.+++||||++++++||||+|||+.++|+||+|||||+||||||++|+|++. ++
T Consensus 316 ~e~ml~~~e~il~~LgLpyrvv~~~tgdlg~~a~~tyDiE~w~P~~~~~~Eiss~Snc~dyqArr~~iry~~~~~~~~~~ 395 (485)
T 3qne_A 316 FDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEK 395 (485)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCGGGCCTTCSEEEEEEEEETTTTEEEEEEEEEECTTHHHHHTTCEECC------CC
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEcCCcccCCchhhheeeeEeccCCCceeEEEEecCCcCccccccceEEecccccCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999865 22
Q ss_pred ----ccccccccchhheeheeccccCCCeeEecccccccccccccCCCCccccccCcccchHHHHHHh
Q psy11602 171 ----KIYATACATTRVICAILETHQTETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQK 234 (1083)
Q Consensus 171 ----~~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~ 234 (1083)
++|+||+|++|+|+|||||||+++||+||++|+|||++.. -++|++.+.|+..+..++++
T Consensus 396 ~~vhtlNgt~lav~R~l~AiLEn~q~~dGi~iP~~L~py~~g~~----~~i~~~~~~~~~~~~~~~~~ 459 (485)
T 3qne_A 396 KYVHCLNSTLSATERTICCILENYQKEDGLVIPEVLRKYIPGEP----EFIPYIKELPKNTTSVKKAK 459 (485)
T ss_dssp CBCEEEEEEEEEHHHHHHHHHHHSEETTEEECCHHHHTTSTTCC----SEEECCCCCSSCC-------
T ss_pred eeeEEEecchhHHHHHHHHHHHhcCCCCceecChhhcCccCCcc----eEeeccccCCcccccccccC
Confidence 2899999999999999999999999999999999996432 26899999999876665544
No 9
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A
Probab=100.00 E-value=1.7e-47 Score=454.79 Aligned_cols=192 Identities=39% Similarity=0.697 Sum_probs=184.6
Q ss_pred CCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHH
Q psy11602 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDE 98 (1083)
Q Consensus 19 ~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~ 98 (1083)
++++|+||+|+++++|++++++||++||++|||+++|||+|+|++||+++||+|+|||+|+|+|+|++|+.++|++.|++
T Consensus 327 ~~~~L~PT~E~~~~~l~~~~i~s~~~LPlr~~~~~~~fR~E~gs~Gr~~~GL~RvrqF~k~e~~~f~~pe~e~s~~~~e~ 406 (536)
T 3err_A 327 TDLYLTGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQE 406 (536)
T ss_dssp TTEEECSSTHHHHHHHTTTCEEEGGGCSEEEEEEEEEECCCTTCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHH
T ss_pred CCEEEccCCcHHHHHHHhcccccHhhCCeeEEEecccccCCccccCCCCCCceeeeeeEEEEEEEEECCchHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999984579999999
Q ss_pred HHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCc------c
Q psy11602 99 MIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------I 172 (1083)
Q Consensus 99 ~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~------~ 172 (1083)
|+++|++||++||||||+|++++||||++++++||||+|||+.++|+||+||||||||||||++|+|++.++. +
T Consensus 407 ~~~~~~~i~~~LgLpyrvv~~~tgdlg~~a~~~yDiE~w~p~~~~~~Ei~s~sn~~dyqarr~~iry~~~~~k~~~vhtl 486 (536)
T 3err_A 407 LLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTL 486 (536)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCTTTSCTTCSEEEEEEEEEGGGTEEEEEEEEEEEETHHHHHHTCEEECTTSCEEECEEE
T ss_pred HHHHHHHHHHHcCCcEEEEEcCCcccCCChhheeeeeEecCCCCCeEEEEEecCccChhhcccCeEEECCCCCeEeeeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999976543 8
Q ss_pred ccccccchhheeheeccccCCCe-eEecccccccccccc
Q psy11602 173 YATACATTRVICAILETHQTETG-VRIPDCLRKFVPAVY 210 (1083)
Q Consensus 173 n~tg~a~~Rli~Alle~~~~~~G-i~lP~~L~p~~~~~~ 210 (1083)
|+||+|++|+|+|||||||+++| ++||++|+|||+...
T Consensus 487 ngs~~a~~R~l~ailen~q~~dg~i~iP~~L~py~g~~~ 525 (536)
T 3err_A 487 NNTALATPRILAMLLENHQLQDGRVRVPQALIPYMGKEV 525 (536)
T ss_dssp EEEEEEETHHHHHHHHHHBCTTSCEECCGGGHHHHTSSE
T ss_pred eccchhHHHHHHHHHHhcCCCCCcEeCChhhCCccCCcc
Confidence 99999999999999999999999 999999999996443
No 10
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=100.00 E-value=1.3e-45 Score=434.63 Aligned_cols=194 Identities=36% Similarity=0.656 Sum_probs=183.2
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
++|+.+++++|+||+|++++++|+++++||++||++|||+++|||+|++ +|++++||+|+|||+|+|+|+|+.|+.++|
T Consensus 269 v~~~~~~~l~L~PTaE~~~~~l~~~~i~s~~~LPlrl~~~s~~FR~Ea~-~G~d~~GL~RvhqF~kvE~~~f~~pe~e~s 347 (501)
T 1wle_A 269 IDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQS 347 (501)
T ss_dssp BCTTTSSSCEECSSHHHHHHHHHTTEEEEGGGCSEEEEEEEEEECCCCS-CC--CCSSSSCSEEEEEEEEEEECSSHHHH
T ss_pred EecCCCCeEEECCcCcHHHHHHHhhccCCcccCCeeEEeccCcccCCCC-CCCCCcCceeeeeeeeeeEEEEeCCcHHHH
Confidence 3455567899999999999999999999999999999999999999999 999999999999999999999999963479
Q ss_pred HHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCc-
Q psy11602 93 WKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK- 171 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~- 171 (1083)
+++|++|+++|++||+.||||||+|.+++||||++++++||+|+|+|+.++|.||+|||||+||||+|++|+|.+.++.
T Consensus 348 ~~~~e~~l~~~~~il~~LgLpyrvv~l~tgdlg~~a~~~~DiE~w~p~~~~~~Ei~s~sn~~DfqarR~~iry~~~~gk~ 427 (501)
T 1wle_A 348 SELLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGEL 427 (501)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSTTTCSEEEEEEEEETTTTEEEEEEEEEECTTHHHHHHTCEEECSSSCE
T ss_pred HHHHHHHHHHHHHHHHHCCCcEEEEEccCcccCCchhheecHhhcccccccceeEEeccccccchhhhcCcEEECCCCCE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999976553
Q ss_pred -----cccccccchhheeheeccccCCCe-eEeccccccccc
Q psy11602 172 -----IYATACATTRVICAILETHQTETG-VRIPDCLRKFVP 207 (1083)
Q Consensus 172 -----~n~tg~a~~Rli~Alle~~~~~~G-i~lP~~L~p~~~ 207 (1083)
+|+||+|++|+|+||||||++++| ++||++|+|||+
T Consensus 428 ~~vHtlngSglav~R~l~alLEn~q~~dG~i~iP~~L~Py~g 469 (501)
T 1wle_A 428 QFAHTVNATGCAVPRLLIALLESYQQKDGSVLVPPALQPYLG 469 (501)
T ss_dssp EECEEEEEEEEEHHHHHHHHHHHHBCTTSCEECCGGGHHHHS
T ss_pred EEEEEECCccchHHHHHHHHHHhCCCCCCCEeCChhhcCccC
Confidence 899999999999999999999999 999999999995
No 11
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=100.00 E-value=2.9e-46 Score=434.44 Aligned_cols=238 Identities=28% Similarity=0.485 Sum_probs=207.1
Q ss_pred CCeeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc---
Q psy11602 193 ETGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE--- 269 (1083)
Q Consensus 193 ~~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd--- 269 (1083)
+.|++|-.+|..|+.+.+. ..||.+|.+|++++.+.. ...++.+.+.+ .||++...+
T Consensus 163 p~ga~l~~aL~~~~~~~~~-~~Gy~ev~tP~l~~~~l~----------------~~sG~~~~f~~---emy~~~d~~l~L 222 (421)
T 1ses_A 163 GDLALYELALLRFAMDFMA-RRGFLPMTLPSYAREKAF----------------LGTGHFPAYRD---QVWAIAETDLYL 222 (421)
T ss_dssp THHHHHHHHHHHHHHHHHH-HTTCEEEECCSEEEHHHH----------------HHHTCTTTTGG---GSCBBTTSSEEE
T ss_pred cHHHHHHHHHHHHHHHHHH-HcCCEEEeCCceecHHHH----------------HhcCCCCcCch---hcEEEcCCeEEE
Confidence 3467777899999999885 889999999999995554 44455555555 455543211
Q ss_pred -ceEEEEeeCCCCCc--chhhhh-hhhccccccccc-----ccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHH
Q psy11602 270 -KVEQFVLTSPHDDE--SWKMLD-EMIQNSEEFYAD-----LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNS 340 (1083)
Q Consensus 270 -~~~~~~~~~~~~~~--s~~~~~-~~~~~~~~~~~~-----~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~ 340 (1083)
++..++++..+.++ |+++|| ++++.+.|||+. ++++||+|+|||+|||+|.+++|+.++|+++|++|+..+
T Consensus 223 ~Pt~e~~~~~~~~~~~~s~~~LPlr~~~~g~~FR~E~g~~Gr~~~GL~R~rqF~q~E~~~f~~p~~e~s~~~~~e~~~~~ 302 (421)
T 1ses_A 223 TGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENA 302 (421)
T ss_dssp CSSTHHHHHHTTTTCEEEGGGCSEEEEEEEEEECCCCSCCCSCCCTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHH
T ss_pred eecCcHHHHHHhcccccCchhCCEEEEecCCeecCCccccCcCCCCCeeeeeeeeeeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 44444555555554 788999 999999999984 899999999999999999999995578999999999999
Q ss_pred HHHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEeecc
Q psy11602 341 EEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNA 420 (1083)
Q Consensus 341 e~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htln~ 420 (1083)
++||+.||||||||.++++|||++|+++||||||+|+++.|+|++|||||+||||||++|||++. +++..||||+||
T Consensus 303 ~~il~~LGL~~rvv~l~t~dlg~~a~~~~DiE~w~p~~~~~~ei~s~s~~~Dfqarr~~i~y~~~---~~~~~~vhtlng 379 (421)
T 1ses_A 303 EEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDP---EGRVRYAYTLNN 379 (421)
T ss_dssp HHHHHHTTCCEEEEECCHHHHCTTCSEEEEEEEEETTTTEEEEEEEEEEEETHHHHHHTCEEECT---TSCEEECEEEEE
T ss_pred HHHHHHCCCceEEEEecCccCCchhhhcccHhheechhccchheeeccccchhhhhhhcCEeECC---CCCEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999975 356899999999
Q ss_pred cccchhHHHHHHHhhccCCCc-eecCccccccCC
Q psy11602 421 TACATTRVICAILETHQTETG-VRIPDCLRKFVP 453 (1083)
Q Consensus 421 t~~a~~R~i~ailEn~q~~~G-i~iP~~L~py~~ 453 (1083)
||+|++|+|+|||||||+++| |+||++|+||||
T Consensus 380 s~lav~R~l~allE~~~~~dG~i~iP~~L~Py~g 413 (421)
T 1ses_A 380 TALATPRILAMLLENHQLQDGRVRVPQALIPYMG 413 (421)
T ss_dssp EEEEETHHHHHHHHHHBCTTSCEECCGGGHHHHS
T ss_pred ccchHHHHHHHHHHhCCCCCCCEecChhcCCccC
Confidence 999999999999999999999 999999999994
No 12
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=100.00 E-value=2.4e-45 Score=429.91 Aligned_cols=236 Identities=42% Similarity=0.646 Sum_probs=201.9
Q ss_pred CeeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc----
Q psy11602 194 TGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE---- 269 (1083)
Q Consensus 194 ~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd---- 269 (1083)
.|++|-.+|..|+.+.+. ..||.+|.+|+++..+...+ .++.+.+.+ .||++...+
T Consensus 191 ~ga~l~~aL~~~~~~~~~-~~Gy~ev~tP~l~~~~l~~~----------------sG~~~~f~~---emy~~~d~~l~Lr 250 (455)
T 2dq0_A 191 EIVILDLALIRFALDRLI-EKGFTPVIPPYMVRRFVEEG----------------STSFEDFED---VIYKVEDEDLYLI 250 (455)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTTCEEEECCSEECHHHHHT----------------TSCTTHHHH---TCCBBTTSSCEEC
T ss_pred HHHHHHHHHHHHHHHHHH-HcCCEEEeCCcccCHHHHHh----------------cCCCCCChH---hhCeecCCcEEEc
Confidence 356666899999998884 88999999999999555543 344444444 355543211
Q ss_pred ceEEEEeeCCCCCc--chhhhh-hhhcccccccc-----cccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHH
Q psy11602 270 KVEQFVLTSPHDDE--SWKMLD-EMIQNSEEFYA-----DLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSE 341 (1083)
Q Consensus 270 ~~~~~~~~~~~~~~--s~~~~~-~~~~~~~~~~~-----~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e 341 (1083)
++..++++..+.++ |+++|| ++++.+.|||+ |++++||+|+|||+|||+|.+++| ++|+++|++|+..++
T Consensus 251 Pt~e~~~~~~~~~~~~s~~~LPlr~~~~g~~FR~E~~~~G~~~~GL~R~rqF~kvE~~~f~~p--e~s~~~~~e~l~~~~ 328 (455)
T 2dq0_A 251 PTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRP--EESWEWHEKIIRNAE 328 (455)
T ss_dssp SSTHHHHHHTTTTEEEETTTCSEEEEEEEEEECCCTTCSSCSCCSSSSCSEEEEEEEEEEECT--TTHHHHHHHHHHHHH
T ss_pred CcCcHHHHHHHHhCccCchhCCEEEEEecCcccCCCCccccccCCceeeeeeEeeeEEEecCH--HHHHHHHHHHHHHHH
Confidence 33334444444443 578899 99999999997 578999999999999999999999 589999999999999
Q ss_pred HHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEeeccc
Q psy11602 342 EFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421 (1083)
Q Consensus 342 ~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htln~t 421 (1083)
+||+.||||||++.++++|||++|+++||||+|+|++++|+||+|||||+||||||++|||++.+ +++..||||+|||
T Consensus 329 ~il~~LGL~yrv~~~~~gdlg~~a~~~~diE~w~p~~~~~~ei~s~s~c~DfqarR~~iry~~~~--~g~~~~vHtlngs 406 (455)
T 2dq0_A 329 ELFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRFRDRT--DEKPRYVHTLNST 406 (455)
T ss_dssp HHHHHTTCCEEEEECCGGGSCSSCSEEEEEEEEETTTTEEEEEEEEEECTTTTHHHHTEEEESST--TSCCEECEEEEEE
T ss_pred HHHHHcCCceEEEECCCccccChhhceeeeeeecCcCCcccEEEeeccchhhHhhccCcEEecCC--CCcEEEEEEEech
Confidence 99999999999999999999999999999999999999999999999999999999999999752 3567899999999
Q ss_pred ccchhHHHHHHHhhccCCCc-eecCccccccCC
Q psy11602 422 ACATTRVICAILETHQTETG-VRIPDCLRKFVP 453 (1083)
Q Consensus 422 ~~a~~R~i~ailEn~q~~~G-i~iP~~L~py~~ 453 (1083)
|+|++|+|+|||||||+++| |+||++|+|||+
T Consensus 407 ~lav~R~i~allE~~~~~dG~i~iP~~LaP~~g 439 (455)
T 2dq0_A 407 AIATSRAIVAILENHQEEDGTVRIPKVLWKYTG 439 (455)
T ss_dssp EEEHHHHHHHHHHHSBCTTSCEECCGGGHHHHS
T ss_pred HhHHHHHHHHHHHHccCCCCcEeCChhhCCccc
Confidence 99999999999999999999 999999999993
No 13
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=100.00 E-value=1.3e-43 Score=412.79 Aligned_cols=236 Identities=32% Similarity=0.537 Sum_probs=199.0
Q ss_pred CeeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc----
Q psy11602 194 TGVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE---- 269 (1083)
Q Consensus 194 ~Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd---- 269 (1083)
.|+++-.+|..|+.+.+. ..||.+|.+|+++..+...+ .++.+.+.+ .+|++...+
T Consensus 170 ~ga~l~~~L~~~~~~~~~-~~Gy~ev~tP~l~~~~l~~~----------------sG~~~~f~~---emy~~~~~~l~Lr 229 (425)
T 2dq3_A 170 WGARLERALINFMLDLHT-KKGYKEICPPHLVKPEILIG----------------TGQLPKFEE---DLYKCERDNLYLI 229 (425)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTTCEEEECCSEECHHHHHH----------------HSCTTTTGG---GSCBCTTTCCEEC
T ss_pred HHHHHHHHHHHHHHHHHH-HcCCEEEECCccccHHHHHh----------------cCCCCcChh---hheEecCCeEEEc
Confidence 356666889999988885 88999999999999555543 344444444 344443111
Q ss_pred ceEEEEeeCCCCC--cchhhhh-hhhcccccccc-----cccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHH
Q psy11602 270 KVEQFVLTSPHDD--ESWKMLD-EMIQNSEEFYA-----DLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSE 341 (1083)
Q Consensus 270 ~~~~~~~~~~~~~--~s~~~~~-~~~~~~~~~~~-----~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e 341 (1083)
++..++++..+.+ .++++|| ++++...|||+ |++++||+|+|||+|||++.+++| ++|++++++|+..++
T Consensus 230 Pt~e~~i~~~~~~~i~s~~~LPlrl~~~g~~FR~E~~~~Gr~~~Gl~R~reF~q~E~~~f~~p--e~s~~~~~e~i~~~~ 307 (425)
T 2dq3_A 230 PTAEVPLTNLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHP--DTSYDELEKLVKDAE 307 (425)
T ss_dssp SSTHHHHHGGGTTEEEETTTCCEEEEEEEEEECCCCSCCSSSCSSSSSCSEEEEEEEEEEECG--GGHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHhhccccccCCeEEEEecCEecCCCCcccccccCcccccceEEeeEEEECCH--HHHHHHHHHHHHHHH
Confidence 2222223333322 2567888 88999999997 569999999999999999999999 579999999999999
Q ss_pred HHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEeeccc
Q psy11602 342 EFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNAT 421 (1083)
Q Consensus 342 ~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htln~t 421 (1083)
+||+.||||||+|.++++|||++++++||+|+|+|+++.|+|++|||||+||||||++|+|++.. +++..||||+|||
T Consensus 308 ~il~~LGL~~rvv~l~~gdlg~~a~~~~diE~w~p~~~~~~ei~s~sn~~Dfqa~r~~i~y~~~~--~~k~~~vHtl~Gs 385 (425)
T 2dq3_A 308 EVLQLLGLPYRVVELCTGDLGFSAAKTYDIEVWFPSQNKYREISSCSNCEDFQARRMNTRFKDSK--TGKNRFVHTLNGS 385 (425)
T ss_dssp HHHHHHTCCEEEEECCTTTCCTTCSEEEEEEEEEGGGTEEEEEEEEEECTTHHHHHHTEEEECTT--TCSEEECEEEEEE
T ss_pred HHHHHCCCceEEEEecCCcCCChHHhccchhhccchhHHHHHHHHcCCccccCcccCCeEEECCC--CCeeEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999763 2567899999999
Q ss_pred ccchhHHHHHHHhhccCCCc-eecCccccccCC
Q psy11602 422 ACATTRVICAILETHQTETG-VRIPDCLRKFVP 453 (1083)
Q Consensus 422 ~~a~~R~i~ailEn~q~~~G-i~iP~~L~py~~ 453 (1083)
|+|++|+|+|||||||+++| |+||++|+||||
T Consensus 386 ~~av~R~i~allE~~~~~~G~i~iP~~L~P~~~ 418 (425)
T 2dq3_A 386 GLAVGRTLAAILENYQQEDGSVVVPEVLRDYVG 418 (425)
T ss_dssp EEEHHHHHHHHHHHTBCTTSCEECCTTTHHHHS
T ss_pred ccHHHHHHHHHHHhCCCCCCCEecCccccCccC
Confidence 99999999999999999999 999999999997
No 14
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=100.00 E-value=1.1e-42 Score=404.48 Aligned_cols=188 Identities=40% Similarity=0.721 Sum_probs=181.6
Q ss_pred CCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHH
Q psy11602 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDE 98 (1083)
Q Consensus 19 ~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~ 98 (1083)
++++|+||+|++++.+++++++++++||+++||+++|||+|+|++|++++||+|+|||+|+|+|+|+.|..++|++.|++
T Consensus 218 ~~l~L~Pt~e~~~~~~~~~~~~s~~~LPlr~~~~g~~FR~E~g~~Gr~~~GL~R~rqF~q~E~~~f~~p~~e~s~~~~~e 297 (421)
T 1ses_A 218 TDLYLTGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQE 297 (421)
T ss_dssp SSEEECSSTHHHHHHTTTTCEEEGGGCSEEEEEEEEEECCCCSCCCSCCCTTSSCSEEEEEEEEEEECSCHHHHHHHHHH
T ss_pred CeEEEeecCcHHHHHHhcccccCchhCCEEEEecCCeecCCccccCcCCCCCeeeeeeeeeeEEEEeCCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999933569999999
Q ss_pred HHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCc------c
Q psy11602 99 MIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------I 172 (1083)
Q Consensus 99 ~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~------~ 172 (1083)
|++.|++||+.||||||+|.+++++||++++++||+|+|+|+.++|.|+++||+|+||||+|++|+|.+.++. +
T Consensus 298 ~~~~~~~il~~LGL~~rvv~l~t~dlg~~a~~~~DiE~w~p~~~~~~ei~s~s~~~Dfqarr~~i~y~~~~~~~~~vhtl 377 (421)
T 1ses_A 298 LLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTL 377 (421)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCHHHHCTTCSEEEEEEEEETTTTEEEEEEEEEEEETHHHHHHTCEEECTTSCEEECEEE
T ss_pred HHHHHHHHHHHCCCceEEEEecCccCCchhhhcccHhheechhccchheeeccccchhhhhhhcCEeECCCCCEEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999999999976543 8
Q ss_pred ccccccchhheeheeccccCCCe-eEecccccccc
Q psy11602 173 YATACATTRVICAILETHQTETG-VRIPDCLRKFV 206 (1083)
Q Consensus 173 n~tg~a~~Rli~Alle~~~~~~G-i~lP~~L~p~~ 206 (1083)
|+||+|++|+|+||||||++++| ++||++|+|||
T Consensus 378 ngs~lav~R~l~allE~~~~~dG~i~iP~~L~Py~ 412 (421)
T 1ses_A 378 NNTALATPRILAMLLENHQLQDGRVRVPQALIPYM 412 (421)
T ss_dssp EEEEEEETHHHHHHHHHHBCTTSCEECCGGGHHHH
T ss_pred CCccchHHHHHHHHHHhCCCCCCCEecChhcCCcc
Confidence 99999999999999999999999 99999999999
No 15
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=100.00 E-value=9e-42 Score=399.70 Aligned_cols=186 Identities=54% Similarity=0.965 Sum_probs=180.4
Q ss_pred CCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHH
Q psy11602 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDE 98 (1083)
Q Consensus 19 ~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~ 98 (1083)
++++|+||+|++++.+|+++++++++||++|+++++|||+|++++|++++||+|+|||+|+|+|.|+.|+ +|++.|++
T Consensus 245 ~~l~LrPt~e~~~~~~~~~~~~s~~~LPlr~~~~g~~FR~E~~~~G~~~~GL~R~rqF~kvE~~~f~~pe--~s~~~~~e 322 (455)
T 2dq0_A 245 EDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPE--ESWEWHEK 322 (455)
T ss_dssp SSCEECSSTHHHHHHTTTTEEEETTTCSEEEEEEEEEECCCTTCSSCSCCSSSSCSEEEEEEEEEEECTT--THHHHHHH
T ss_pred CcEEEcCcCcHHHHHHHHhCccCchhCCEEEEEecCcccCCCCccccccCCceeeeeeEeeeEEEecCHH--HHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999996 49999999
Q ss_pred HHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccC-CCc------
Q psy11602 99 MIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT-KQK------ 171 (1083)
Q Consensus 99 ~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~-~~~------ 171 (1083)
|++.|++||+.|||||+++.++++++|++++++||+|+|+|+.++|+|++||+||+||||+|++|+|.+. ++.
T Consensus 323 ~l~~~~~il~~LGL~yrv~~~~~gdlg~~a~~~~diE~w~p~~~~~~ei~s~s~c~DfqarR~~iry~~~~~g~~~~vHt 402 (455)
T 2dq0_A 323 IIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHT 402 (455)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCGGGSCSSCSEEEEEEEEETTTTEEEEEEEEEECTTTTHHHHTEEEESSTTSCCEECEE
T ss_pred HHHHHHHHHHHcCCceEEEECCCccccChhhceeeeeeecCcCCcccEEEeeccchhhHhhccCcEEecCCCCcEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999976 442
Q ss_pred cccccccchhheeheeccccCCCe-eEecccccccc
Q psy11602 172 IYATACATTRVICAILETHQTETG-VRIPDCLRKFV 206 (1083)
Q Consensus 172 ~n~tg~a~~Rli~Alle~~~~~~G-i~lP~~L~p~~ 206 (1083)
+|+||+|++|+|+||||||++++| ++||..|+|||
T Consensus 403 lngs~lav~R~i~allE~~~~~dG~i~iP~~LaP~~ 438 (455)
T 2dq0_A 403 LNSTAIATSRAIVAILENHQEEDGTVRIPKVLWKYT 438 (455)
T ss_dssp EEEEEEEHHHHHHHHHHHSBCTTSCEECCGGGHHHH
T ss_pred EechHhHHHHHHHHHHHHccCCCCcEeCChhhCCcc
Confidence 789999999999999999999999 99999999999
No 16
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A*
Probab=100.00 E-value=1.3e-42 Score=387.31 Aligned_cols=225 Identities=14% Similarity=0.113 Sum_probs=178.9
Q ss_pred eEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc------
Q psy11602 196 VRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE------ 269 (1083)
Q Consensus 196 i~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd------ 269 (1083)
..|-.+|..||.+ .. .+||.+|..|.+++.+..++.+ +.+++.+ .+|.++.++
T Consensus 64 a~L~~aLe~~~~~-~~-~~Gy~ev~~P~lv~~~~~e~SG----------------hl~~F~e---~mf~v~~~~~d~~e~ 122 (346)
T 3mf2_A 64 ESIVERLAALITS-HR-EAGTEALRFPPVMSRAQLEKSG----------------YLKSFPN---LLGCVCGLHGTEREI 122 (346)
T ss_dssp HHHHHHHHHHHHH-TC-CTTCEEEECCSEEEHHHHHHTT----------------HHHHCGG---GCEEEEEECSCHHHH
T ss_pred HHHHHHHHHHHHh-hH-hcCCeEEECCCccCHHHHHhcC----------------CcccChh---hcceeecccccchhh
Confidence 5566889999988 74 8999999999999966665554 4444444 233332211
Q ss_pred -------------------------ceEEEEeeCCCCCc-chhhhh-hhhcccccccccccCcCceeEEEeeeEEEEEEe
Q psy11602 270 -------------------------KVEQFVLTSPHDDE-SWKMLD-EMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLT 322 (1083)
Q Consensus 270 -------------------------~~~~~~~~~~~~~~-s~~~~~-~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~~~ 322 (1083)
+++.++++..+.++ --.+.| ++...+.|||+.. .+||+|||||+|||++.||
T Consensus 123 ~~ll~~~~~~~~~~~~l~~~d~~LiPtacvpl~~~~~~eg~i~~~plr~~~~g~CFR~Ea-S~GL~RvhqF~kvE~v~~~ 201 (346)
T 3mf2_A 123 NAAVSRFDAGGDWTTSLSPADLVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREP-SKHLDRLQSFRMREYVCIG 201 (346)
T ss_dssp HHHHHHHHTTSCGGGGEEEEEEEECSSSSTTHHHHHHTTCSCCTTCEEEEEEEEEECCCC-CSSTTSCSEEEEEEEEEEE
T ss_pred hhhhhhhccccccccccCCCCEEEcccccHHHHHHHccCCcccccCeEEEEECCccCCcC-CCCCeeeeeeEEEEEEEEe
Confidence 22222222222211 011113 3333455999988 5899999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHhCCcEEEEeccCCCcchh------------hhceeeEEEeeCCCCcEEeeecccCc
Q psy11602 323 SPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVSGALNHA------------AAKKLDLEAWFPGSGAFRELVSCSNC 390 (1083)
Q Consensus 323 ~~~~~~s~~~~e~~~~~~e~~~~~L~lpyRvv~~~~~dl~~~------------a~~~~DiE~w~P~~~~y~Ev~S~sn~ 390 (1083)
+| |+|++++++|++++++||+.|||||||+.+ +|+||+ +++|||||||+|++++|+||+|||||
T Consensus 202 tp--Eqs~~e~e~l~~~ae~il~~LgLpyrv~~~--~D~~f~~~G~l~~~~Q~~~~~kyDlevw~p~~~~y~EisS~Sn~ 277 (346)
T 3mf2_A 202 TP--DDVSDFRERWMVRAQAIARDLGLTFRVDYA--SDPFFGRVGQMKAVSQKQQQLKFELLIPLRSEEQPTACMSFNYH 277 (346)
T ss_dssp SH--HHHHHHHHHHHHHHHHHHHHTTCCCEEEEC--CCCCCHHHHHHHHHHHHHTTCEEEEEECSSCSSSCEEEEEEEEC
T ss_pred CH--HHHHHHHHHHHHHHHHHHHHCCCCEEEEEc--cCCCcCcccchhhhccccccceEEEEEEcCCCCCeeEEEeeecc
Confidence 99 799999999999999999999999999977 799998 36899999999999999999999999
Q ss_pred ccccccccceEEecccCCCCceeeEEeecccccchhHHHHHHHhhccCCCceecCccccccCCCc
Q psy11602 391 LAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 455 (1083)
Q Consensus 391 ~d~qarrl~iry~~~~~~~~~~~~~htln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~~~~ 455 (1083)
+||||||++|||++ .+||||+ |+|+|++|+|+|||||||++. +.||++||+||++.
T Consensus 278 ~dfqarR~~Ir~~~-------~~~vHT~-~sglav~R~l~AiLen~G~d~-~~wP~~lr~~l~~~ 333 (346)
T 3mf2_A 278 REHFGTTWGIQDAN-------GEPAHTG-CVAFGMDRLAVAMFHTHGTDL-SAWPAKVRDILGLQ 333 (346)
T ss_dssp TTHHHHHHTCBCTT-------SSBCEEE-EEEEEHHHHHHHHHHHHCSCG-GGSCHHHHHHTTSC
T ss_pred cchhhhhhcceeCC-------CCeEEEc-ccchHHHHHHHHHHHHcCCCc-cccCHHHHHHhCCC
Confidence 99999999999973 2699998 999999999999999999884 78999999999854
No 17
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=100.00 E-value=4.7e-40 Score=382.96 Aligned_cols=188 Identities=41% Similarity=0.776 Sum_probs=181.1
Q ss_pred CCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHH
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLD 97 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~ 97 (1083)
+++++|+||+|++++.+|+++++++++||+||+++++|||+|++++||+++||+|+|||+|+|+++|+.++. |++.++
T Consensus 223 ~~~l~LrPt~e~~i~~~~~~~i~s~~~LPlrl~~~g~~FR~E~~~~Gr~~~Gl~R~reF~q~E~~~f~~pe~--s~~~~~ 300 (425)
T 2dq3_A 223 RDNLYLIPTAEVPLTNLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDT--SYDELE 300 (425)
T ss_dssp TTCCEECSSTHHHHHGGGTTEEEETTTCCEEEEEEEEEECCCCSCCSSSCSSSSSCSEEEEEEEEEEECGGG--HHHHHH
T ss_pred CCeEEEcCCCcHHHHHHHHhhccccccCCeEEEEecCEecCCCCcccccccCcccccceEEeeEEEECCHHH--HHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999999999963 999999
Q ss_pred HHHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCC-Cc-----
Q psy11602 98 EMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTK-QK----- 171 (1083)
Q Consensus 98 ~~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~-~~----- 171 (1083)
+|+..+.+||+.|||||+++.+++|++|++++++||+|+|+|+.++|.|+++|+||+||||+|++|+|.+.+ +.
T Consensus 301 e~i~~~~~il~~LGL~~rvv~l~~gdlg~~a~~~~diE~w~p~~~~~~ei~s~sn~~Dfqa~r~~i~y~~~~~~k~~~vH 380 (425)
T 2dq3_A 301 KLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYDIEVWFPSQNKYREISSCSNCEDFQARRMNTRFKDSKTGKNRFVH 380 (425)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCTTTCCTTCSEEEEEEEEEGGGTEEEEEEEEEECTTHHHHHHTEEEECTTTCSEEECE
T ss_pred HHHHHHHHHHHHCCCceEEEEecCCcCCChHHhccchhhccchhHHHHHHHHcCCccccCcccCCeEEECCCCCeeEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999765 22
Q ss_pred -cccccccchhheeheeccccCCCe-eEeccccccccc
Q psy11602 172 -IYATACATTRVICAILETHQTETG-VRIPDCLRKFVP 207 (1083)
Q Consensus 172 -~n~tg~a~~Rli~Alle~~~~~~G-i~lP~~L~p~~~ 207 (1083)
+|++|+|++|+|+||||||++++| ++||++|+|||+
T Consensus 381 tl~Gs~~av~R~i~allE~~~~~~G~i~iP~~L~P~~~ 418 (425)
T 2dq3_A 381 TLNGSGLAVGRTLAAILENYQQEDGSVVVPEVLRDYVG 418 (425)
T ss_dssp EEEEEEEEHHHHHHHHHHHTBCTTSCEECCTTTHHHHS
T ss_pred EEeccccHHHHHHHHHHHhCCCCCCCEecCccccCccC
Confidence 899999999999999999999999 999999999995
No 18
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A*
Probab=100.00 E-value=2.4e-35 Score=328.83 Aligned_cols=183 Identities=17% Similarity=0.201 Sum_probs=163.3
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcc-cCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDS-WLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDE 91 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~-i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~ 91 (1083)
.++..+.+++|+||+|.+++++++++ +++ +.|+++..+++|||+|+ + +||+|+|||+|+|++.|++|+ +
T Consensus 136 ~~~l~~~d~~LiPtacvpl~~~~~~eg~i~--~~plr~~~~g~CFR~Ea-S-----~GL~RvhqF~kvE~v~~~tpE--q 205 (346)
T 3mf2_A 136 TTSLSPADLVLSPAACYPVYPIAASRGPLP--KGGLRFDVAADCFRREP-S-----KHLDRLQSFRMREYVCIGTPD--D 205 (346)
T ss_dssp GGGEEEEEEEECSSSSTTHHHHHHTTCSCC--TTCEEEEEEEEEECCCC-C-----SSTTSCSEEEEEEEEEEESHH--H
T ss_pred ccccCCCCEEEcccccHHHHHHHccCCccc--ccCeEEEEECCccCCcC-C-----CCCeeeeeeEEEEEEEEeCHH--H
Confidence 34445668999999999999999986 777 44999999999999999 5 389999999999999999886 5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCcc------------cceeEeEEEEecCCCceeEEEEcCCCchhhhh
Q psy11602 92 SWKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHA------------AAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR 159 (1083)
Q Consensus 92 s~~~~~~~~~~y~~if~~LgLpyrvv~~~sgdlg~~------------as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~ 159 (1083)
+++.+++|++.++.||+.||||||++.+ +|+|.+ +++|||+|+|+|++++|.||+|||||+|||||
T Consensus 206 s~~e~e~l~~~ae~il~~LgLpyrv~~~--~D~~f~~~G~l~~~~Q~~~~~kyDlevw~p~~~~y~EisS~Sn~~dfqar 283 (346)
T 3mf2_A 206 VSDFRERWMVRAQAIARDLGLTFRVDYA--SDPFFGRVGQMKAVSQKQQQLKFELLIPLRSEEQPTACMSFNYHREHFGT 283 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEC--CCCCCHHHHHHHHHHHHHTTCEEEEEECSSCSSSCEEEEEEEECTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEc--cCCCcCcccchhhhccccccceEEEEEEcCCCCCeeEEEeeecccchhhh
Confidence 9999999999999999999999999987 789977 36899999999999999999999999999999
Q ss_pred cccceeccCCCc-cccccccchhheeheeccccCCCeeEecccccccccc
Q psy11602 160 RLLVRYGQTKQK-IYATACATTRVICAILETHQTETGVRIPDCLRKFVPA 208 (1083)
Q Consensus 160 rl~i~y~~~~~~-~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~~~ 208 (1083)
|++|||++.... ..|+|+|++|+|+||||||+++ -+.||++|+++++.
T Consensus 284 R~~Ir~~~~~~vHT~~sglav~R~l~AiLen~G~d-~~~wP~~lr~~l~~ 332 (346)
T 3mf2_A 284 TWGIQDANGEPAHTGCVAFGMDRLAVAMFHTHGTD-LSAWPAKVRDILGL 332 (346)
T ss_dssp HHTCBCTTSSBCEEEEEEEEHHHHHHHHHHHHCSC-GGGSCHHHHHHTTS
T ss_pred hhcceeCCCCeEEEcccchHHHHHHHHHHHHcCCC-ccccCHHHHHHhCC
Confidence 999999853222 3478899999999999999988 47899999999964
No 19
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=100.00 E-value=2.9e-35 Score=348.35 Aligned_cols=182 Identities=17% Similarity=0.203 Sum_probs=171.5
Q ss_pred CCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHH
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLD 97 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~ 97 (1083)
+++++|+||+|++++.++++++.||++||++|||++++||+|+ ++++||+|+|||+|+|+++|+.+. ++|++.++
T Consensus 114 ~~~l~LrPt~e~~i~~~~~~~i~SyrdLPlrl~q~~~~fR~E~----~~~~GL~R~REF~q~e~h~f~~~~-e~a~~e~~ 188 (518)
T 3ial_A 114 EERLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHET----KNTKPLIRVREIHWNEAHCCHATA-EDAVSQLS 188 (518)
T ss_dssp EEEEEECSSSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECTTC----CSCBTTTBCSEEEEEEEEEEESSH-HHHHHHHH
T ss_pred CcceeECCCCcHHHHHHHHhhhcccccCCeEEEEEeceecCCC----CCCCCCceeeEEEEeeEEEEECCH-HHHHHHHH
Confidence 5689999999999999999999999999999999999999999 557999999999999999997766 78999999
Q ss_pred HHHHHHHHHH-HHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCc-----
Q psy11602 98 EMIQNSEEFY-ADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK----- 171 (1083)
Q Consensus 98 ~~~~~y~~if-~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~----- 171 (1083)
+|+++|.+|| +.|||||+++.++++|++++|.++||||+|||+ ++++|++++++++++||++|+|+|.+.+|.
T Consensus 189 ~~l~~~~~i~~~~LGlp~~~~~~~~~e~~~gA~yt~~iE~~~pd-gr~ie~gt~~~Lg~~~s~rf~i~y~d~~g~~~~~h 267 (518)
T 3ial_A 189 DYWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVMPC-GRVLQTAGIHNLGQRFSSTFDILYANKANESVHPY 267 (518)
T ss_dssp HHHHHHHHHHTTTTCCCCEEEEECGGGCCTTCSEEEEEEEECTT-SCEEEEEEEEEEETHHHHHTTCCEECTTCCEECCE
T ss_pred HHHHHHHHHHHHhcCCcEEeeecChhhccCCCccceEEEEEcCC-CCEEEEeceecccchhhhhcCcEEECCCCCEeeeE
Confidence 9999999999 999999999999999999999999999999996 789999999999999999999999988765
Q ss_pred cccccccchhheeheeccccCCCeeEecccccccc
Q psy11602 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFV 206 (1083)
Q Consensus 172 ~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~ 206 (1083)
+++.|++ +|+|+||||+|++++|++||+.|+||+
T Consensus 268 ~~~~G~~-~R~iaaliE~~~de~Gl~lP~~LAP~q 301 (518)
T 3ial_A 268 LTCAGIS-TRVLACALSIHGDSGGLVLPPLIAPIH 301 (518)
T ss_dssp EEEEEEE-THHHHHHHHHHCBTTBCCCCGGGCSCS
T ss_pred EeccchH-HHHHHHHHHHhCCCCccccCCccceEE
Confidence 4555666 999999999999999999999999998
No 20
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=99.97 E-value=3.1e-32 Score=323.78 Aligned_cols=182 Identities=19% Similarity=0.289 Sum_probs=171.2
Q ss_pred CCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEe-EEEEEEEeCCCchHHHHHH
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFE-KVEQFVLTSPHDDESWKML 96 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~-~~e~~~~~~~~~e~s~~~~ 96 (1083)
+++++|+||+|++++.+|++++.++++||+++||+++|||+|. ++++||+|+|||+ |+|++.+..+. ++|++.+
T Consensus 129 ~~~l~LrPt~e~~i~~~~~~~~~s~~~LPlr~~q~g~~fR~E~----~~~rGl~R~REF~~q~e~~~~~~~~-e~a~~e~ 203 (501)
T 1nj1_A 129 QRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYET----KHTRPLIRVREITTFKEAHTIHATA-SEAEEQV 203 (501)
T ss_dssp EEEEEECSSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCC----SCCBTTTBCSEEEEEEEEEEEESSH-HHHHHHH
T ss_pred CCeeEEccCCCHHHHHHHHhhhcccccCCEEEEeecCEeeCCC----CCCCCCceeEEEeeeeeEEEEECCH-HHHHHHH
Confidence 5789999999999999999999999999999999999999999 4578999999999 99999877766 6799999
Q ss_pred HHHHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCc-----
Q psy11602 97 DEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK----- 171 (1083)
Q Consensus 97 ~~~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~----- 171 (1083)
++|+++|.+||+.|||||+++..+.++++.++..+||||+|||+ +++.|++++++||++||++++++|.+.+|.
T Consensus 204 ~~~l~~~~~i~~~Lgl~~~~~~~~~~e~~~~a~~~~die~~l~~-g~~~ei~t~~~lg~~~a~~~~~ry~~~~g~~~~~h 282 (501)
T 1nj1_A 204 ERAVEIYKEFFNSLGIPYLITRRPPWDKFPGSEYTVAFDTLMPD-GKTLQIGTVHNLGQTFARTFEIKFETPEGDHEYVH 282 (501)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCTTTSCTTCSEEEEEEEECTT-SCEEEEEEEEEEETHHHHHHTCEEECTTSCEEECE
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCchhhcCCcccceEEEEEcCC-CCEEEEEEEEeccccchhhcCeEEECCCCCEEeee
Confidence 99999999999999999999999999999999999999999996 789999999999999999999999876553
Q ss_pred cccccccchhheeheeccccCCCeeEecccccccc
Q psy11602 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFV 206 (1083)
Q Consensus 172 ~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~ 206 (1083)
++++|++ +|+|+||+|+|++++|++||..|+|++
T Consensus 283 ~~g~Gig-eRli~aliE~~~d~~Gl~~P~~laP~q 316 (501)
T 1nj1_A 283 QTCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQ 316 (501)
T ss_dssp EEEEEEC-THHHHHHHHHTCCSSSEECCTTTSSCS
T ss_pred eccccHH-HHHHHHHHHHcCcccCccCCccccCce
Confidence 6788888 999999999999999999999999998
No 21
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A
Probab=99.97 E-value=3.7e-33 Score=329.96 Aligned_cols=232 Identities=16% Similarity=0.120 Sum_probs=179.7
Q ss_pred eEeccccccccccc-ccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEee--e-----
Q psy11602 196 VRIPDCLRKFVPAV-YLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVH--Q----- 267 (1083)
Q Consensus 196 i~lP~~L~p~~~~~-~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~--q----- 267 (1083)
+.|-.+|..++.+. + ...||.+|..|+++..+..++.+ +.+.+.+ .+|++. .
T Consensus 231 ~~L~~~L~~~~~~e~~-~~~G~~EV~tP~L~~~el~~~SG----------------h~~~F~d---emy~v~~~~~Rd~~ 290 (522)
T 2cja_A 231 ARIFRTFEKIVLEELL-EPLGYREMIFPKLVTWEVWMKSG----------------HAKGVYP---EIYYVCPPQTRDPD 290 (522)
T ss_dssp HHHHHHHHHHHHHHTH-HHHTCEECBCCSEEEHHHHHHHT----------------GGGTCGG---GCCEEECBSCCCHH
T ss_pred HHHHHHHHHHHHHHHH-HHcCCEEEECCCcccHHHHhhcC----------------CcCcccc---ceeeeecCCccchh
Confidence 33447788888754 4 37899999999999977665544 3333333 233321 0
Q ss_pred -------------------------cc-----ceEEEEeeCCCC--Ccchhhhh-hhhc-ccccccccccC--cCceeEE
Q psy11602 268 -------------------------FE-----KVEQFVLTSPHD--DESWKMLD-EMIQ-NSEEFYADLDT--RGIFRVH 311 (1083)
Q Consensus 268 -------------------------fd-----~~~~~~~~~~~~--~~s~~~~~-~~~~-~~~~~~~~~~t--rGl~Rvh 311 (1083)
.+ ++...+++..+. -.||++|| ++++ ...|||+. .. +||+|+|
T Consensus 291 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~LrPt~e~~i~~~f~~~i~s~~~LPlrl~q~ig~~FR~E-pgs~~GL~R~R 369 (522)
T 2cja_A 291 YWEEVADYYKVTHEVPTKLIKEKIAEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYE-SGGIHGIERVD 369 (522)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHBCCCCEEECSSSSGGGGGGTTTCEECGGGCSEEEEECSSEEECCC-SSSCCCTTSCS
T ss_pred hhhhhhhhhhccccccccccccccCCCcEEEccCCcHHHHHHHHhcccccccCCeeEEEEcCceEeCC-CCCCCCCeEeE
Confidence 01 111112222222 24678899 8999 89999997 44 9999999
Q ss_pred EeeeEEEEEEeCCCchhHHHHHHHHH-HHHHHHHHHhCCcEEEEeccCCCcch------------hhhceeeEEEeeC--
Q psy11602 312 QFEKVEQFVLTSPHDDESWKTLDEMI-QNSEEFYADLGIAYRVVNIVSGALNH------------AAAKKLDLEAWFP-- 376 (1083)
Q Consensus 312 qf~kvE~f~~~~~~~~~s~~~~e~~~-~~~e~~~~~L~lpyRvv~~~~~dl~~------------~a~~~~DiE~w~P-- 376 (1083)
||+++|++.|++| +++++.+++|+ ..++.||+.|||| ++ .+ ++|.++ ++++|||||+|||
T Consensus 370 EF~q~E~~~F~~p--e~s~ee~ee~i~~~~~~~l~~LGLp-~v-~~-~~D~f~~a~~G~~G~~q~~a~~k~DiE~~~P~~ 444 (522)
T 2cja_A 370 EFHRIEIVWIGTK--EEVLKCAEELHDRYMHIFNDILDIE-WR-KA-RVTPWFMAQEGLLGLAEENTVGTTDYEACLPYR 444 (522)
T ss_dssp EEEEEEEEEEEEH--HHHHHHHHHHHHHHHHHHHHTSCCC-EE-EE-EC----------------CCCEEEEEEECCGGG
T ss_pred EEEEeeEEEEeCh--HHHHHHHHHHHHHHHHHHHHHcCCC-EE-ee-ccCCccccccccccchhccccceEEEEEecccc
Confidence 9999999999998 68999999999 9999999999999 64 33 567666 4789999999999
Q ss_pred -CCCcEEeeecccCcccccccccceEEecccCCCCceeeEEeecccccchhHHHHHHHhhccCCCceecCccccccCCCc
Q psy11602 377 -GSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFVPAV 455 (1083)
Q Consensus 377 -~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~~~~ 455 (1083)
++++|+|++|||||+||||||++|+|++ .+|+|| |++|+|++|+|+|||||||+++| .||++||||||+.
T Consensus 445 ~g~~~~~eisS~s~~~d~qarr~~Ir~~~-------~~~vht-~~~Glgv~Rli~AlLE~~~~~~~-~wP~~lr~ym~g~ 515 (522)
T 2cja_A 445 GPDGEWLEFQNVSINGDKYPKGFNVKLQS-------GDELWS-GCSGVGLERWAAVFLAQKGLDPA-NWPEEFRNRVGEM 515 (522)
T ss_dssp CTTCCCEEEEEEEECTTHHHHHHTCEETT-------CCCEEE-EEEEEEHHHHHHHHHHHHCSCGG-GSCHHHHHHHCSC
T ss_pred cCCCcEEEEeeechhhhhcccccceEcCC-------CCEEEE-eccCcHHHHHHHHHHHHcCCCCC-cCchHHHHhhCCC
Confidence 7999999999999999999999999973 248999 69999999999999999999877 8999999999854
Q ss_pred ccCCCcccCCC
Q psy11602 456 YVNEAGEIPFV 466 (1083)
Q Consensus 456 ~~~~~~~~~~~ 466 (1083)
+++|||+
T Consensus 516 ----~~~~~~~ 522 (522)
T 2cja_A 516 ----PKGIRFL 522 (522)
T ss_dssp ----CCCCCCC
T ss_pred ----CccCCCC
Confidence 5778885
No 22
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.1e-32 Score=323.27 Aligned_cols=182 Identities=14% Similarity=0.120 Sum_probs=169.5
Q ss_pred CCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHH
Q psy11602 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDE 98 (1083)
Q Consensus 19 ~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~ 98 (1083)
++++|+||+|.+++.+|+++++||++||+||+|++++||+|+ ++++||+|+|||+|+|+++|..+. ++|++.+..
T Consensus 121 e~l~LrPtse~~i~~~~~~~i~SyrdLPlrl~q~g~~fR~E~----~~~~Gl~R~ReF~q~e~h~~~~~~-e~a~~E~~~ 195 (519)
T 4hvc_A 121 EPIAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEF----KHPQPFLRTREFLWQEGHSAFATM-EEAAEEVLQ 195 (519)
T ss_dssp EEEEECSSSHHHHHHHHHHHCSSGGGCCEEEEEEEEEECCCC----SCCBTTTBCSEEEEEEEEEEESSH-HHHHHHHHH
T ss_pred cceeeCCCCcHHHHHHHHhhccccccCCeEEEEEcCeeeCCC----CCCCCCcceeEEEEeeEEEEecCH-HHHHHHHHH
Confidence 469999999999999999999999999999999999999998 567999999999999999966666 679999999
Q ss_pred HHHHHHHHHHHc-CCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccC--CCc----
Q psy11602 99 MIQNSEEFYADL-GIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT--KQK---- 171 (1083)
Q Consensus 99 ~~~~y~~if~~L-gLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~--~~~---- 171 (1083)
|++.|++||+.| +|||+++..+.++++.++..+||||+|||+.+++.|++++++++++||++|+|+|.+. ++.
T Consensus 196 ~l~~~~~i~~~ll~lp~~~~~~t~~e~~~Ga~~t~~iEa~~p~~gr~~q~gT~~~Lg~~~s~~~~i~y~d~~~~g~~~~v 275 (519)
T 4hvc_A 196 ILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKIPGEKQFA 275 (519)
T ss_dssp HHHHHHHHHHTTSCCCCEEEECCTTTSCTTSSEEEEEEEEETTTTEEEEEEEEEEEETHHHHHHTCEEECTTSTTCEEEC
T ss_pred HHHHHHHHHHHhcCCcceeeecCCccccCCchhheeeeeeeccCCCEEeecccccccchhhhhcCcEEeccccCCCEEEE
Confidence 999999999997 9999999999999999999999999999999999999999999999999999999985 233
Q ss_pred -cccccccchhheeheeccccCCCeeEecccccccc
Q psy11602 172 -IYATACATTRVICAILETHQTETGVRIPDCLRKFV 206 (1083)
Q Consensus 172 -~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~ 206 (1083)
+++.|++ +|+|+||+|+|++++|++||..|+|++
T Consensus 276 h~~~~Gi~-~R~l~aliE~~~d~~gl~~P~~laP~q 310 (519)
T 4hvc_A 276 YQNSWGLT-TRTIGVMTMVHGDNMGLVLPPRVACVQ 310 (519)
T ss_dssp EEEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCS
T ss_pred EEccccHH-HHHHHHHHHHhCccccccccccCCCeE
Confidence 4566776 999999999999999999999999998
No 23
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A
Probab=99.97 E-value=2.4e-32 Score=323.07 Aligned_cols=183 Identities=18% Similarity=0.181 Sum_probs=159.5
Q ss_pred CCCCCeeEecCChHHHHHHHhcccCCCCCCCceEee-eccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHH
Q psy11602 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLG-VSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWK 94 (1083)
Q Consensus 16 r~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyq-i~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~ 94 (1083)
+.+++++|+||+|++++.+|+++++++++||+++|| +++|||+|. ..++||+|+|||+|+|++.|+.++ ++++
T Consensus 314 ~~~~~l~LrPt~e~~i~~~f~~~i~s~~~LPlrl~q~ig~~FR~Ep----gs~~GL~R~REF~q~E~~~F~~pe--~s~e 387 (522)
T 2cja_A 314 IAEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYES----GGIHGIERVDEFHRIEIVWIGTKE--EVLK 387 (522)
T ss_dssp BCCCCEEECSSSSGGGGGGTTTCEECGGGCSEEEEECSSEEECCCS----SSCCCTTSCSEEEEEEEEEEEEHH--HHHH
T ss_pred cCCCcEEEccCCcHHHHHHHHhcccccccCCeeEEEEcCceEeCCC----CCCCCCeEeEEEEEeeEEEEeChH--HHHH
Confidence 356799999999999999999999999999999999 999999995 347899999999999999999775 5999
Q ss_pred HHHHHH-HHHHHHHHHcCCceEEEEeccCCCCc------------ccceeEeEEEEec---CCCceeEEEEcCCCchhhh
Q psy11602 95 MLDEMI-QNSEEFYADLGIAYRVVNIVSGALNH------------AAAKKLDLEAWFP---GSGAFRELVSCSNCLDYQS 158 (1083)
Q Consensus 95 ~~~~~~-~~y~~if~~LgLpyrvv~~~sgdlg~------------~as~~~diE~~~P---~~~~~~ev~s~s~cgdyqs 158 (1083)
.+++++ ...+.|++.|||| ++ .. ++|.|. .++.+||||+||| +.+.+.+++||++|+||||
T Consensus 388 e~ee~i~~~~~~~l~~LGLp-~v-~~-~~D~f~~a~~G~~G~~q~~a~~k~DiE~~~P~~~g~~~~~eisS~s~~~d~qa 464 (522)
T 2cja_A 388 CAEELHDRYMHIFNDILDIE-WR-KA-RVTPWFMAQEGLLGLAEENTVGTTDYEACLPYRGPDGEWLEFQNVSINGDKYP 464 (522)
T ss_dssp HHHHHHHHHHHHHHHTSCCC-EE-EE-EC----------------CCCEEEEEEECCGGGCTTCCCEEEEEEEECTTHHH
T ss_pred HHHHHHHHHHHHHHHHcCCC-EE-ee-ccCCccccccccccchhccccceEEEEEecccccCCCcEEEEeeechhhhhcc
Confidence 999999 7777788999999 53 33 445444 3689999999999 6899999999999999999
Q ss_pred hcccceeccCCCc-cccccccchhheeheeccccCCCeeEecccccccccc
Q psy11602 159 RRLLVRYGQTKQK-IYATACATTRVICAILETHQTETGVRIPDCLRKFVPA 208 (1083)
Q Consensus 159 ~rl~i~y~~~~~~-~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~~~ 208 (1083)
++|+|+|.+.... .+++|+|++|+|+||||||+++.+ .||.+|+|||+.
T Consensus 465 rr~~Ir~~~~~~vht~~~Glgv~Rli~AlLE~~~~~~~-~wP~~lr~ym~g 514 (522)
T 2cja_A 465 KGFNVKLQSGDELWSGCSGVGLERWAAVFLAQKGLDPA-NWPEEFRNRVGE 514 (522)
T ss_dssp HHHTCEETTCCCEEEEEEEEEHHHHHHHHHHHHCSCGG-GSCHHHHHHHCS
T ss_pred cccceEcCCCCEEEEeccCcHHHHHHHHHHHHcCCCCC-cCchHHHHhhCC
Confidence 9999999854433 778999999999999999998876 999999999954
No 24
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=99.95 E-value=1.6e-28 Score=291.97 Aligned_cols=230 Identities=17% Similarity=0.263 Sum_probs=187.8
Q ss_pred eeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc--ceE
Q psy11602 195 GVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE--KVE 272 (1083)
Q Consensus 195 Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd--~~~ 272 (1083)
|..+-.+|..++.+.+ .. ||.+|..|+++..+...+. .++.+.+.+ .||++.... +.+
T Consensus 70 g~~l~~~i~~~~~~~~-~~-G~~ei~tP~l~~~~l~~~~---------------sG~~~~f~~---emy~~~d~g~~~~~ 129 (501)
T 1nj1_A 70 GFMIRKNTLKILRRIL-DR-DHEEVLFPLLVPEDELAKE---------------AIHVKGFED---EVYWVTHGGLSKLQ 129 (501)
T ss_dssp HHHHHHHHHHHHHHHH-TT-TCEECCCCSEEEHHHHTTS---------------HHHHHHTTT---TCCEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHHH-Hc-CCEEEecCcEecHHHHhcc---------------cCCcccCCc---ceEEEecCCCcccC
Confidence 3444467788877777 37 9999999999996555331 122333333 456554321 011
Q ss_pred EEEeeCCCC-----------Ccchhhhh-hhhccccccccccc-CcCceeEEEee-eEEEE-EEeCCCchhHHHHHHHHH
Q psy11602 273 QFVLTSPHD-----------DESWKMLD-EMIQNSEEFYADLD-TRGIFRVHQFE-KVEQF-VLTSPHDDESWKTLDEMI 337 (1083)
Q Consensus 273 ~~~~~~~~~-----------~~s~~~~~-~~~~~~~~~~~~~~-trGl~Rvhqf~-kvE~f-~~~~~~~~~s~~~~e~~~ 337 (1083)
.--...|.. -.||++|| ++++...|||+.+. +|||+|+|||+ ++|.. .+++| +++++.+++|+
T Consensus 130 ~~l~LrPt~e~~i~~~~~~~~~s~~~LPlr~~q~g~~fR~E~~~~rGl~R~REF~~q~e~~~~~~~~--e~a~~e~~~~l 207 (501)
T 1nj1_A 130 RKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATA--SEAEEQVERAV 207 (501)
T ss_dssp EEEEECSSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEESSH--HHHHHHHHHHH
T ss_pred CeeEEccCCCHHHHHHHHhhhcccccCCEEEEeecCEeeCCCCCCCCCceeEEEeeeeeEEEEECCH--HHHHHHHHHHH
Confidence 111233321 14788999 99999999999877 99999999999 99964 56777 68999999999
Q ss_pred HHHHHHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEe
Q psy11602 338 QNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHM 417 (1083)
Q Consensus 338 ~~~e~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~ht 417 (1083)
..+++||+.||||||++..+++|++++|.++||||+|||. |++.|++|++||+|+||+|++|||.+. +++.+|+|+
T Consensus 208 ~~~~~i~~~Lgl~~~~~~~~~~e~~~~a~~~~die~~l~~-g~~~ei~t~~~lg~~~a~~~~~ry~~~---~g~~~~~h~ 283 (501)
T 1nj1_A 208 EIYKEFFNSLGIPYLITRRPPWDKFPGSEYTVAFDTLMPD-GKTLQIGTVHNLGQTFARTFEIKFETP---EGDHEYVHQ 283 (501)
T ss_dssp HHHHHHHHHHTCCCEEEECCTTTSCTTCSEEEEEEEECTT-SCEEEEEEEEEEETHHHHHHTCEEECT---TSCEEECEE
T ss_pred HHHHHHHHHCCCeEEEEeCCchhhcCCcccceEEEEEcCC-CCEEEEEEEEeccccchhhcCeEEECC---CCCEEeeee
Confidence 9999999999999999999999999999999999999996 999999999999999999999999875 466789999
Q ss_pred ecccccchhHHHHHHHhhccCCCceecCccccccC
Q psy11602 418 LNATACATTRVICAILETHQTETGVRIPDCLRKFV 452 (1083)
Q Consensus 418 ln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~ 452 (1083)
||+|++ +|+|+||||+||+++|++||+.|+||.
T Consensus 284 -~g~Gig-eRli~aliE~~~d~~Gl~~P~~laP~q 316 (501)
T 1nj1_A 284 -TCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQ 316 (501)
T ss_dssp -EEEEEC-THHHHHHHHHTCCSSSEECCTTTSSCS
T ss_pred -ccccHH-HHHHHHHHHHcCcccCccCCccccCce
Confidence 899999 999999999999999999999999986
No 25
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=99.95 E-value=1.5e-28 Score=291.19 Aligned_cols=230 Identities=16% Similarity=0.183 Sum_probs=187.9
Q ss_pred eeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc--ceE
Q psy11602 195 GVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE--KVE 272 (1083)
Q Consensus 195 Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd--~~~ 272 (1083)
|..|-.+|..++.+.+. ..||.+|..|+++..+...+. .++...+.+ .||++.... ..+
T Consensus 54 G~~i~~~L~~~~~~~~~-~~Gy~eV~tP~l~~~el~~k~---------------sgh~~~f~~---emy~v~d~g~~~~~ 114 (518)
T 3ial_A 54 GFFMENAIMRLCEEEYA-KVGISQILFPTVIPESFLKKE---------------SDHIKGFEA---ECFWVEKGGLQPLE 114 (518)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTCEECBCCSEEEHHHHTSS---------------HHHHHHHGG---GCEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHHHH-HcCCEEEEcccccCHHHHHhh---------------cCCcccccc---cEEEEecCCCcccC
Confidence 34444678888877774 789999999999996554221 122333333 455554321 111
Q ss_pred EEEeeCCCC-----------Ccchhhhh-hhhccccccccc-ccCcCceeEEEeeeEEEEEE-eCCCchhHHHHHHHHHH
Q psy11602 273 QFVLTSPHD-----------DESWKMLD-EMIQNSEEFYAD-LDTRGIFRVHQFEKVEQFVL-TSPHDDESWKTLDEMIQ 338 (1083)
Q Consensus 273 ~~~~~~~~~-----------~~s~~~~~-~~~~~~~~~~~~-~~trGl~Rvhqf~kvE~f~~-~~~~~~~s~~~~e~~~~ 338 (1083)
.--...|.. -.||++|| ++++...|||+. +.++||+|+|||.++|++.| ++| +++++.+++|++
T Consensus 115 ~~l~LrPt~e~~i~~~~~~~i~SyrdLPlrl~q~~~~fR~E~~~~~GL~R~REF~q~e~h~f~~~~--e~a~~e~~~~l~ 192 (518)
T 3ial_A 115 ERLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHATA--EDAVSQLSDYWK 192 (518)
T ss_dssp EEEEECSSSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECTTCCSCBTTTBCSEEEEEEEEEEESSH--HHHHHHHHHHHH
T ss_pred cceeECCCCcHHHHHHHHhhhcccccCCeEEEEEeceecCCCCCCCCCceeeEEEEeeEEEEECCH--HHHHHHHHHHHH
Confidence 112233321 24789999 999999999997 67899999999999999999 777 789999999999
Q ss_pred HHHHHH-HHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEe
Q psy11602 339 NSEEFY-ADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHM 417 (1083)
Q Consensus 339 ~~e~~~-~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~ht 417 (1083)
.+++|| +.||||||++.++++|++++|.++||||+|||. |++.|++++++++++||+|++|+|.+. +++..|+|+
T Consensus 193 ~~~~i~~~~LGlp~~~~~~~~~e~~~gA~yt~~iE~~~pd-gr~ie~gt~~~Lg~~~s~rf~i~y~d~---~g~~~~~h~ 268 (518)
T 3ial_A 193 VIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVMPC-GRVLQTAGIHNLGQRFSSTFDILYANK---ANESVHPYL 268 (518)
T ss_dssp HHHHHHTTTTCCCCEEEEECGGGCCTTCSEEEEEEEECTT-SCEEEEEEEEEEETHHHHHTTCCEECT---TCCEECCEE
T ss_pred HHHHHHHHhcCCcEEeeecChhhccCCCccceEEEEEcCC-CCEEEEeceecccchhhhhcCcEEECC---CCCEeeeEE
Confidence 999999 999999999999999999999999999999996 999999999999999999999999976 567899995
Q ss_pred -ecccccchhHHHHHHHhhccCCCceecCccccccC
Q psy11602 418 -LNATACATTRVICAILETHQTETGVRIPDCLRKFV 452 (1083)
Q Consensus 418 -ln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~ 452 (1083)
++|++ +|+|+||||+|++++|++||+.|+||-
T Consensus 269 ~~~G~~---~R~iaaliE~~~de~Gl~lP~~LAP~q 301 (518)
T 3ial_A 269 TCAGIS---TRVLACALSIHGDSGGLVLPPLIAPIH 301 (518)
T ss_dssp EEEEEE---THHHHHHHHHHCBTTBCCCCGGGCSCS
T ss_pred eccchH---HHHHHHHHHHhCCCCccccCCccceEE
Confidence 66654 999999999999999999999999995
No 26
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens}
Probab=99.94 E-value=6.6e-28 Score=286.20 Aligned_cols=233 Identities=14% Similarity=0.117 Sum_probs=189.4
Q ss_pred eEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeeccce--EE
Q psy11602 196 VRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKV--EQ 273 (1083)
Q Consensus 196 i~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd~~--~~ 273 (1083)
+.|-.+|..|+.+.+. ..||.+|..|+++..+...+. .++...+.+ .+|.+...+.. ++
T Consensus 61 ~~i~~~L~~~~~~~~~-~~Gy~ev~tP~l~~~~l~~k~---------------sGh~~~f~~---emy~~~d~g~~~l~e 121 (519)
T 4hvc_A 61 YAIWEAIKDFFDAEIK-KLGVENCYFPMFVSQSALEKE---------------KTHVADFAP---EVAWVTRSGKTELAE 121 (519)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCEECBCCSEEEHHHHTTS---------------CCSCGGGGG---GCEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHH-HcCCEEEeccccccHHHHhcc---------------cCCcccccc---cceEEeccCCccccc
Confidence 4444778888877774 789999999999995554321 233444444 45554332211 11
Q ss_pred EEeeCCC-----------CCcchhhhh-hhhccccccccc-ccCcCceeEEEeeeEEEEE-EeCCCchhHHHHHHHHHHH
Q psy11602 274 FVLTSPH-----------DDESWKMLD-EMIQNSEEFYAD-LDTRGIFRVHQFEKVEQFV-LTSPHDDESWKTLDEMIQN 339 (1083)
Q Consensus 274 ~~~~~~~-----------~~~s~~~~~-~~~~~~~~~~~~-~~trGl~Rvhqf~kvE~f~-~~~~~~~~s~~~~e~~~~~ 339 (1083)
--...|. .-.||++|| ++++...|||+. +.++||+|+|||+++|++. +++| ++|++.+++|++.
T Consensus 122 ~l~LrPtse~~i~~~~~~~i~SyrdLPlrl~q~g~~fR~E~~~~~Gl~R~ReF~q~e~h~~~~~~--e~a~~E~~~~l~~ 199 (519)
T 4hvc_A 122 PIAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATM--EEAAEEVLQILDL 199 (519)
T ss_dssp EEEECSSSHHHHHHHHHHHCSSGGGCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEESSH--HHHHHHHHHHHHH
T ss_pred ceeeCCCCcHHHHHHHHhhccccccCCeEEEEEcCeeeCCCCCCCCCcceeEEEEeeEEEEecCH--HHHHHHHHHHHHH
Confidence 1223332 124789999 999999999998 8889999999999999998 7787 7899999999999
Q ss_pred HHHHHHHh-CCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEee
Q psy11602 340 SEEFYADL-GIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHML 418 (1083)
Q Consensus 340 ~e~~~~~L-~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htl 418 (1083)
+++||+.| +|||+++..+.+|.+++|.++||||||||++|++.|++++++++++||+|++|+|.+... +++..|||+
T Consensus 200 ~~~i~~~ll~lp~~~~~~t~~e~~~Ga~~t~~iEa~~p~~gr~~q~gT~~~Lg~~~s~~~~i~y~d~~~-~g~~~~vh~- 277 (519)
T 4hvc_A 200 YAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQGGTSHHLGQNFSKMFEIVFEDPKI-PGEKQFAYQ- 277 (519)
T ss_dssp HHHHHHTTSCCCCEEEECCTTTSCTTSSEEEEEEEEETTTTEEEEEEEEEEEETHHHHHHTCEEECTTS-TTCEEECEE-
T ss_pred HHHHHHHhcCCcceeeecCCccccCCchhheeeeeeeccCCCEEeecccccccchhhhhcCcEEecccc-CCCEEEEEE-
Confidence 99999997 999999999999999999999999999999999999999999999999999999997521 356789998
Q ss_pred cccccchhHHHHHHHhhccCCCceecCccccccC
Q psy11602 419 NATACATTRVICAILETHQTETGVRIPDCLRKFV 452 (1083)
Q Consensus 419 n~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~ 452 (1083)
++.|+. +|+|+||+|+|++++|+++|..|+||-
T Consensus 278 ~~~Gi~-~R~l~aliE~~~d~~gl~~P~~laP~q 310 (519)
T 4hvc_A 278 NSWGLT-TRTIGVMTMVHGDNMGLVLPPRVACVQ 310 (519)
T ss_dssp EEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCS
T ss_pred ccccHH-HHHHHHHHHHhCccccccccccCCCeE
Confidence 356665 999999999999999999999999985
No 27
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1
Probab=99.94 E-value=1.9e-27 Score=280.14 Aligned_cols=182 Identities=21% Similarity=0.276 Sum_probs=168.2
Q ss_pred CCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEe-EEEEEEEeCCCchHHHHHH
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFE-KVEQFVLTSPHDDESWKML 96 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~-~~e~~~~~~~~~e~s~~~~ 96 (1083)
+++++|+||+|++++.+|++++.||++||+++||++++||+|.. .++||+|+|||+ |.|.++|+.+. +++++.+
T Consensus 97 ~~~l~LRP~~~~~i~~~~~~~~~s~r~LP~rl~qig~~fR~E~~----~~rGl~R~REF~qq~d~~~~~~~~-~~a~~e~ 171 (459)
T 1nj8_A 97 DVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETK----HTRPLIRLREIMTFKEAHTAHSTK-EEAENQV 171 (459)
T ss_dssp EEEEEECSSSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCCS----CCBTTTBCSBCSCEEEEEEEESSH-HHHHHHH
T ss_pred CCeeEECCCCcHHHHHHHHHhhhhcccCCeEEEEEccEecCccC----CCCCceEeeeeeccCcEEEEECCH-HHHHHHH
Confidence 67899999999999999999999999999999999999999983 377999999999 99999988877 7899999
Q ss_pred HHHHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCc-----
Q psy11602 97 DEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK----- 171 (1083)
Q Consensus 97 ~~~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~----- 171 (1083)
.+++++|.+||+.|||||++...+..+.++++..++|||+++|+ ++..++++++++|+++|++++++|.+.+|.
T Consensus 172 ~~~i~~~~~~~~~LGl~~~~~~~~~~ek~~ga~~~~~ie~~~~d-g~~~e~gt~~~lg~~~s~~~~~~Y~~~~G~~~~v~ 250 (459)
T 1nj8_A 172 KEAISIYKKFFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFPD-GRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAY 250 (459)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEECTTSCCTTCSEEEEEEEECTT-SCEEEEEEEEEEETHHHHHTTCEEECTTSSEEECE
T ss_pred HHHHHHHHHHHHHCCCceEEeecCchhhcCCcccceeEEEEcCC-CcEEEEEEEeecccccccccCeEEECCCCCEeeee
Confidence 99999999999999999999999999999999999999999995 667899999999999999999999876554
Q ss_pred cccccccchhheeheeccccCCCeeEecccccccc
Q psy11602 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFV 206 (1083)
Q Consensus 172 ~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~ 206 (1083)
.+++|++ +|+|+||+++|+++.|++||..|+|++
T Consensus 251 ~~~~Gig-eRli~alie~~~d~~gl~~P~~laP~q 284 (459)
T 1nj8_A 251 QTCYGIS-DRVIASIIAIHGDEKGLILPPIVAPIQ 284 (459)
T ss_dssp EEEEEEC-THHHHHHHHHHCBTTBCCCCTTSCSSS
T ss_pred EeeccHH-HHHHHHHHHHhCCCceeEcCCcCCCCc
Confidence 4556666 999999999999999999999999987
No 28
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=99.93 E-value=3.1e-26 Score=277.05 Aligned_cols=141 Identities=15% Similarity=0.185 Sum_probs=131.5
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
.+|+.+++++|+||+|.+++.++++++.+|++||+|+||++++||+|.+ +++||+|+|||+|+|++.|+.+. +++
T Consensus 96 ~~d~~~~~~~LrP~~~~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~----~~~Gl~R~ReF~q~d~~~f~~~~-~~~ 170 (572)
T 2j3l_A 96 LKDRNDRDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKR----SRSGLLRGREFIMKDGYSFHADE-ASL 170 (572)
T ss_dssp EECTTCCEEEECSCCHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSS----CCTGGGSCSEEEEEEEEEEESSH-HHH
T ss_pred EecCCCCeEEEccccHHHHHHHHHhhccChhhcCHhhheecCeeccCcC----cccCccccceeEEeeeEEEcCCH-HHH
Confidence 3688899999999999999999999999999999999999999999994 37899999999999999999987 789
Q ss_pred HHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccc
Q psy11602 93 WKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV 163 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i 163 (1083)
++.+.+|+++|.+||++|||+|+++..++|+||+..+| |+|.++..+..++..|+.|+ |.++...+
T Consensus 171 ~~e~~~~~~~~~~~~~~lgl~~~~~~~~~g~~g~~~s~----E~~~~~~~ge~~~~~~~~~~-~~~~~~~~ 236 (572)
T 2j3l_A 171 DQSYRDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSK----EFMAISEIGEDTICYSTESD-YAANLEMA 236 (572)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGTCSSEE----EEEEECTTCSEEEEEESSSS-CEEETTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEecccccCCCcccE----EEEEEcCCCcceEEEeCCCC-cccchhhh
Confidence 99999999999999999999999999999999999999 99999999999999999999 76665433
No 29
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=99.92 E-value=6.3e-26 Score=268.17 Aligned_cols=181 Identities=17% Similarity=0.104 Sum_probs=166.2
Q ss_pred CCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHH
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLD 97 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~ 97 (1083)
+++++|+||+|++++.+|++++.+|++||+++||++++||+|. + ++||+|+|||+|.|+++|+.+. +++++.+.
T Consensus 103 ~~~l~LRP~~~~~i~~~~~~~~~s~r~LP~rl~qig~vfR~E~----~-~rGl~R~REF~q~d~~~~~~~~-~~ad~E~~ 176 (477)
T 1hc7_A 103 EEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEM----R-TRPFLRTSEFLWQEGHTAHATR-EEAEEEVR 176 (477)
T ss_dssp EEEEEECSCSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCS----S-CBTTTBCSEEEEEEEEEEESSH-HHHHHHHH
T ss_pred CCeEEEcCCCcHHHHHHHHhhhhccccCCeeeEeecCEEeCCC----C-CCCcceeEEEEEccEEEEeCCH-HHHHHHHH
Confidence 6789999999999999999999999999999999999999998 3 4599999999999999988777 78999999
Q ss_pred HHHHHHHHHH-HHcCCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCc-----
Q psy11602 98 EMIQNSEEFY-ADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK----- 171 (1083)
Q Consensus 98 ~~~~~y~~if-~~LgLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~----- 171 (1083)
.|+++|.+|| +.|||||++...+..+.+.++..+++||+++|+ ++..++++++++|+.+|++++++|.+.+|.
T Consensus 177 ~~l~~~~~i~~~~Lgl~~~~~~~~~~e~~~g~~~~~~ie~~~~d-gr~~~~gt~~~lg~~~s~~~g~~y~~~~G~~~~~~ 255 (477)
T 1hc7_A 177 RMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKD-GKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVH 255 (477)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCTTTSCTTSSEEEEEEEECTT-SCEEEEEEEEEEETHHHHHTTCEEECTTSCEEECE
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCChHHhcCCcccceEEEEEcCC-CcEEEEeeeEEcccccccccCeEEECCCCCEEeee
Confidence 9999999999 899999999999989999998899999999996 455799999999998999999999876654
Q ss_pred cccccccchhheeheeccccCCCeeEecccccccc
Q psy11602 172 IYATACATTRVICAILETHQTETGVRIPDCLRKFV 206 (1083)
Q Consensus 172 ~n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~ 206 (1083)
.++.|++ +|+|++|+|+|+++.|++||..|+|++
T Consensus 256 ~~~~Gig-eRli~~lie~~~d~~gl~~P~~laP~q 289 (477)
T 1hc7_A 256 TTSWGLS-WRFIGAIIMTHGDDRGLVLPPRLAPIQ 289 (477)
T ss_dssp EEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCS
T ss_pred EeeccHH-HHHHHHHHHHhCccccccCCcccCCce
Confidence 4566777 999999999999999999999999987
No 30
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens}
Probab=99.90 E-value=2.4e-24 Score=250.59 Aligned_cols=176 Identities=13% Similarity=0.119 Sum_probs=142.2
Q ss_pred eeEec-CChHHHHHHHhcccCCCC-CCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHH
Q psy11602 21 KYLIA-TSEQPICAVHRDSWLPEA-SLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDE 98 (1083)
Q Consensus 21 ~~L~p-TsE~~i~~l~~~~i~s~~-~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~ 98 (1083)
++|+| |++.+++. |.++..+++ +||++++||++|||+|++. ..+.+||+|+|||++.|++.|++|+. ++++++.
T Consensus 147 ~~LRPeTaqg~~~n-fk~~~~s~r~~LP~~iaqig~~FR~E~g~-~~~~~GL~RvrEFtq~E~~~F~~Pe~--~~e~~~~ 222 (459)
T 3ikl_A 147 GGLRENLLHGALEH-YVNCLDLVNKRLPYGLAQIGVCFHPVFDT-KQIRNGVKSIGEKTEASLVWFTPPRT--SNQWLDF 222 (459)
T ss_dssp TB-CSCSHHHHHHH-TTTTTGGGTTBSSEEEEEEEEEECCC-----------CCCCEEEEEEEEEEECGGG--HHHHHHH
T ss_pred ceECCCCChhHHHH-HhhhhhhccccCCeEEEEEeeeeeccccc-ccCCCCcccccceeeeeEEEEeChhH--HHHHHHH
Confidence 79999 66666655 667788888 9999999999999999752 24557999999999999999999975 8999999
Q ss_pred HHHHHHHHHHHcCCc---eEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccc----eeccCCC-
Q psy11602 99 MIQNSEEFYADLGIA---YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLV----RYGQTKQ- 170 (1083)
Q Consensus 99 ~~~~y~~if~~LgLp---yrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i----~y~~~~~- 170 (1083)
+++....||+.|||| ||+++.+..+ |..++|||+|||. +|.|+.+|+||+||++++... +|.+.++
T Consensus 223 ~~~~~~~~~~~LGi~~~~~r~~~~~~ee----A~~~~DiE~~~p~--G~~E~~g~sn~tDfqL~~~~~~~~~~~~~~dg~ 296 (459)
T 3ikl_A 223 WLRHRLQWWRKFAMSPSNFSSSDCQDEE----GRKGNKLYYNFPW--GKELIETLWNLGDHELLHMYPGNVSKLHGRDGR 296 (459)
T ss_dssp HHHHHHHHHHHHCSSGGGEEEEEECCSS----SSCEEEEEEECSS--CEEEEEEEEEEETHHHHHHSCSCSSSSCCBSSS
T ss_pred HHHHHHHHHHHhCCChhhEEEeecCchH----HHhhcCeEEEcCC--ceEEEeeeeccchhhhhccccccCceeEccCCC
Confidence 999999999999999 9999996555 7789999999997 699999999999999998553 4443332
Q ss_pred -----ccccccccchhheeheeccccCCCe-------------eEecccccccc
Q psy11602 171 -----KIYATACATTRVICAILETHQTETG-------------VRIPDCLRKFV 206 (1083)
Q Consensus 171 -----~~n~tg~a~~Rli~Alle~~~~~~G-------------i~lP~~L~p~~ 206 (1083)
.|..++++++|++.|+|+++.++.| ++||..|+||+
T Consensus 297 ~k~~P~vi~~s~Gv~R~~~AiLe~~~de~~~~~~~~~~~~R~vl~lP~~LAP~q 350 (459)
T 3ikl_A 297 KNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLHPCLAPIK 350 (459)
T ss_dssp CBCCCEEEEEEEEHHHHHHHHHHTTCC-------------CCCCCCCTTTCSCC
T ss_pred eeeeeEEEEecccHHHHHHHHHHHHhhhccccccccccccceEEEeCcccCCce
Confidence 1778999999999999998777655 89999999998
No 31
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A*
Probab=99.89 E-value=8.7e-24 Score=249.18 Aligned_cols=189 Identities=15% Similarity=0.151 Sum_probs=161.3
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
.+|+++++++|+||+|+.++.+++.++.+|++||+|+||++++||+|+ ++++||+|+|||+|+|+++|+.+. +++
T Consensus 116 ~~d~~~~~~~LrPt~ee~t~~i~r~~~~s~~~lP~rl~~ig~~fR~E~----~p~~Gl~R~REF~q~d~~~f~~~~-~~a 190 (458)
T 2i4l_A 116 IADRHKRELLYGPTNEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQ----RPRFGVMRGREFLMKDAYSFDVDE-AGA 190 (458)
T ss_dssp EECTTCCEEEECSCCHHHHHHHHHHHCCBGGGCSEEEEEEEEEECCCS----SCBTGGGBCSEEEEEEEEEEESSH-HHH
T ss_pred EEeCCCCeEEECCCChHHHHHHHHHHHhhccccCeeeEEecCEeeCCC----CCCCCcccccceEEeEEEEEECCH-HHH
Confidence 468899999999999999999999999999999999999999999998 457899999999999999999877 789
Q ss_pred HHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCcccceeEeE------EE------------------------------
Q psy11602 93 WKMLDEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDL------EA------------------------------ 136 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgLpyrvv~~~sgdlg~~as~~~di------E~------------------------------ 136 (1083)
+..|..|+++|.+||++|||+|+++...+|.+|+..++++-+ +.
T Consensus 191 d~e~~~~~~~~~~i~~~lGl~~~~~~~~~g~~gg~~s~e~~~l~~~ged~i~~~~~~~~~n~~~~~~~~~~~l~~~l~~~ 270 (458)
T 2i4l_A 191 RKSYNKMFVAYLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDLTPIIKQW 270 (458)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEECCCCSSCSSCEEEEEEECTTCSEEEEEEGGGGGCCCCCTTCCTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEEEccccccCCccchhhhhhhhcCcceEEecccccccCHHHHhccccHhHHHHHhcC
Confidence 999999999999999999999999999999999999886411 00
Q ss_pred -----Ee-----------cCCC------ceeEEEEcCCCchhhhhcccceeccCCCc-----cccccccchhheeheecc
Q psy11602 137 -----WF-----------PGSG------AFRELVSCSNCLDYQSRRLLVRYGQTKQK-----IYATACATTRVICAILET 189 (1083)
Q Consensus 137 -----~~-----------P~~~------~~~ev~s~s~cgdyqs~rl~i~y~~~~~~-----~n~tg~a~~Rli~Alle~ 189 (1083)
.. |..+ +-++++.+..+|+.+|.+++++|.+.+|. +.++|++++|+|+||+|+
T Consensus 271 ~~~~~~~~~~~~g~~~~~~~~~~~l~~~rgl~~G~iFelg~~~s~~~g~ry~~~~G~~~p~~~~gfgiGveRli~al~e~ 350 (458)
T 2i4l_A 271 TSVYAATEDVHEPARYESEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEA 350 (458)
T ss_dssp HHSCEEETTTCCTTHHHHHSCTTTEEEEEEEEEEEEEEEETHHHHHTTCEEECTTSCEEECEEEEEEEEHHHHHHHHHHH
T ss_pred chhhhcChhhcccccccCCCCCcCceeeeeeccCcEEEecccccccCCcEEECCCCCEeceEEeeecccHHHHHHHHHHh
Confidence 00 1000 11344555555667799999999876654 678899999999999999
Q ss_pred ccCCCeeEecccccccc
Q psy11602 190 HQTETGVRIPDCLRKFV 206 (1083)
Q Consensus 190 ~~~~~Gi~lP~~L~p~~ 206 (1083)
++|++|+.||..++|+.
T Consensus 351 ~~d~~g~~~p~~~ap~~ 367 (458)
T 2i4l_A 351 CHDDNGIIWPEAVAPFR 367 (458)
T ss_dssp SEETTEECCCTTTCSCS
T ss_pred hccccCCcCCcccCCce
Confidence 99999999999999986
No 32
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens}
Probab=99.88 E-value=1.6e-23 Score=243.77 Aligned_cols=171 Identities=13% Similarity=0.061 Sum_probs=139.0
Q ss_pred eEEEEeeCCC-CCcchh-hhh-hhhccccccccc----ccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHH
Q psy11602 271 VEQFVLTSPH-DDESWK-MLD-EMIQNSEEFYAD----LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEF 343 (1083)
Q Consensus 271 ~~~~~~~~~~-~~~s~~-~~~-~~~~~~~~~~~~----~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~ 343 (1083)
+++..++..+ .-.|++ +|| ++.+...|||.. ...+||||||||+++|++.||+| ++++++|+.++..++.|
T Consensus 153 Taqg~~~nfk~~~~s~r~~LP~~iaqig~~FR~E~g~~~~~~GL~RvrEFtq~E~~~F~~P--e~~~e~~~~~~~~~~~~ 230 (459)
T 3ikl_A 153 LLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEKTEASLVWFTPP--RTSNQWLDFWLRHRLQW 230 (459)
T ss_dssp SHHHHHHHTTTTTGGGTTBSSEEEEEEEEEECCC----------CCCCEEEEEEEEEEECG--GGHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHhhhhhhccccCCeEEEEEeeeeecccccccCCCCcccccceeeeeEEEEeCh--hHHHHHHHHHHHHHHHH
Confidence 4555555443 234676 888 888888899985 56799999999999999999999 68999999999999999
Q ss_pred HHHhCCc---EEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccce----EEecccCCCCceeeEE
Q psy11602 344 YADLGIA---YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLV----RYGQTKKMNEKIEFVH 416 (1083)
Q Consensus 344 ~~~L~lp---yRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~i----ry~~~~~~~~~~~~~h 416 (1083)
|+.|||| ||++.++..+ |.+++|||+|||. .|+|+.+||||+|||.+++.+ +|.+. +++.+|+|
T Consensus 231 ~~~LGi~~~~~r~~~~~~ee----A~~~~DiE~~~p~--G~~E~~g~sn~tDfqL~~~~~~~~~~~~~~---dg~~k~~P 301 (459)
T 3ikl_A 231 WRKFAMSPSNFSSSDCQDEE----GRKGNKLYYNFPW--GKELIETLWNLGDHELLHMYPGNVSKLHGR---DGRKNVVP 301 (459)
T ss_dssp HHHHCSSGGGEEEEEECCSS----SSCEEEEEEECSS--CEEEEEEEEEEETHHHHHHSCSCSSSSCCB---SSSCBCCC
T ss_pred HHHhCCChhhEEEeecCchH----HHhhcCeEEEcCC--ceEEEeeeeccchhhhhccccccCceeEcc---CCCeeeee
Confidence 9999999 9999997666 8899999999997 599999999999999999764 33322 34567899
Q ss_pred eecccccchhHHHHHHHhhccCCCc-------------eecCccccccC
Q psy11602 417 MLNATACATTRVICAILETHQTETG-------------VRIPDCLRKFV 452 (1083)
Q Consensus 417 tln~t~~a~~R~i~ailEn~q~~~G-------------i~iP~~L~py~ 452 (1083)
+++.++++++|+++||||++.+++| +++|..|+||-
T Consensus 302 ~vi~~s~Gv~R~~~AiLe~~~de~~~~~~~~~~~~R~vl~lP~~LAP~q 350 (459)
T 3ikl_A 302 CVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLHPCLAPIK 350 (459)
T ss_dssp EEEEEEEEHHHHHHHHHHTTCC-------------CCCCCCCTTTCSCC
T ss_pred EEEEecccHHHHHHHHHHHHhhhccccccccccccceEEEeCcccCCce
Confidence 9999999999999999999777665 89999999995
No 33
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=99.86 E-value=1.9e-22 Score=240.07 Aligned_cols=181 Identities=17% Similarity=0.215 Sum_probs=154.5
Q ss_pred CCCeeEecCChHHHHHHHhcccCCC-CCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHH
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLPE-ASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKML 96 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s~-~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~ 96 (1083)
++.++|+|+.+.++.-.|.+++.+| ++||+++||+++|||+|+ ++..||+|+|||+|+|++.|+.++ ++.+++
T Consensus 180 ~~~~~LRPE~t~~i~~~~~~~~~sy~r~LP~rl~qig~~FR~E~----~pr~GL~R~REF~q~d~~~f~~~e--~~~~~~ 253 (505)
T 1ati_A 180 GLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEI----TPRNFIFRVREFEQMEIEYFVRPG--EDEYWH 253 (505)
T ss_dssp GGEEEECSSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCS----SCCTGGGSCSEEEEEEEEEEECGG--GHHHHH
T ss_pred ccceeecccchhHHHHHHHHHHHhcCCCCCEEEEEeeceeeCCC----CCCCCCCcccceEEeeEEEEECHH--HHHHHH
Confidence 3467888888888888888899999 999999999999999999 466799999999999999888775 499999
Q ss_pred HHHHHHHHHHHHHcCCceEEEEecc---CCCCcccceeEeEEEEecCCCceeEEEEcCCCchhh-----h----------
Q psy11602 97 DEMIQNSEEFYADLGIAYRVVNIVS---GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQ-----S---------- 158 (1083)
Q Consensus 97 ~~~~~~y~~if~~LgLpyrvv~~~s---gdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyq-----s---------- 158 (1083)
.+++++|.+||++|||+|+.+...+ +++...+..+||+|+|+|. +|.++..|.+++||+ +
T Consensus 254 ~~~i~~~~~i~~~LGl~~~~v~~~~~~~~~~~~~~~~~~d~E~~~p~--~~~e~~g~~~~~d~~L~~~~~~~~~~~~~~~ 331 (505)
T 1ati_A 254 RYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPH--GSLELEGIAQRTDFDLGSHTKDQEALGITAR 331 (505)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEECCTTTSCTTCSEEEEEEEEETT--EEEEEEEEEECTTHHHHHHCSSTTTTTCCSC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECCCChHhhhcccHHHHhHHhhcCC--CCccchhhhcccceecchhhccccccceeee
Confidence 9999999999999999987777665 5565567788999999995 688999999999998 3
Q ss_pred ------hcccceeccCCCc------cccccccchhheeheecccc--------C-CCeeEecccccccc
Q psy11602 159 ------RRLLVRYGQTKQK------IYATACATTRVICAILETHQ--------T-ETGVRIPDCLRKFV 206 (1083)
Q Consensus 159 ------~rl~i~y~~~~~~------~n~tg~a~~Rli~Alle~~~--------~-~~Gi~lP~~L~p~~ 206 (1083)
++++++|.+.++. +.+++++++|+|.||+|++. + +.|++||..|+|+.
T Consensus 332 ~~~n~~~~~~~~y~d~~g~~~y~p~vig~s~GieRli~alle~~~~~~~~~~gd~~~gl~~p~~laP~~ 400 (505)
T 1ati_A 332 VLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIK 400 (505)
T ss_dssp CCCCSCCCSCCCEECSSSCCEECCEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCGGGCSCS
T ss_pred ecccccceeEEEEEcCCCCeeecceEEEEeeEHHHHHHHHHHHHhhhcccccccccccccCCcccCCce
Confidence 6889999865332 66788899999999999863 2 45689999999986
No 34
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A*
Probab=99.83 E-value=7.9e-21 Score=223.67 Aligned_cols=177 Identities=14% Similarity=0.201 Sum_probs=141.5
Q ss_pred CCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHH
Q psy11602 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKML 96 (1083)
Q Consensus 17 ~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~ 96 (1083)
.+++++|+||+|.+++.+|+++++||++||+||+|+++|||+|.+++ ++||+|+|||+|+|++.|+.++ ++++.+
T Consensus 120 ~~~~l~LrPt~~~~~~~~~~~~~~s~r~LPlrl~~~g~~fR~E~~~~---~~GL~R~ReF~q~d~~~f~~~e--~~~~e~ 194 (460)
T 3uh0_A 120 EKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGA---LSGLTRLRKFHQDDGHIFCTPS--QVKSEI 194 (460)
T ss_dssp ---CEEECSCSHHHHHHHHTTSCCBGGGCSEEEEECCEEECCCCTTT---CBTTTBCSEEEEEEEEEEECGG--GHHHHH
T ss_pred CCceEEEcccCcHHHHHHHHhccccccccCeEEEEecCeeeCCCCCC---CCCceeeeeEEEeeEEEEcCHH--HHHHHH
Confidence 46789999999999999999999999999999999999999999532 7899999999999999999875 599999
Q ss_pred HHHHHHHHHHH-HHcCCc---------eEEEEeccCC---CCcc----------------------------cce--eEe
Q psy11602 97 DEMIQNSEEFY-ADLGIA---------YRVVNIVSGA---LNHA----------------------------AAK--KLD 133 (1083)
Q Consensus 97 ~~~~~~y~~if-~~LgLp---------yrvv~~~sgd---lg~~----------------------------as~--~~d 133 (1083)
+++++.+.++| +.|||| |++.. .+.. +|.. +.+ ++|
T Consensus 195 ~~~i~~~~~~~~~~lGl~~~~~~~~~~~~~~l-~t~pe~~~G~~~~w~~ae~~L~~~l~~~g~~~~~~~g~gafygpkid 273 (460)
T 3uh0_A 195 FNSLKLIDIVYNKIFPFVKGGSGAESNYFINF-STRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLD 273 (460)
T ss_dssp HHHHHHHHHHHTTTSCCC-----CCSSCEEEE-ECCCSSCCSCHHHHHHHHHHHHHHHHHHTCCEEEETTCSCSSCCEEE
T ss_pred HHHHHHHHHHHHHHcCCCCcccccccceEEEE-ccCCcccCCCHHHHHHHHHHHHHHHHHhCCCeeECCCccccccceEE
Confidence 99999999999 999999 54433 3322 4422 222 445
Q ss_pred EEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCc------c--ccccccchhheeheeccccCCCeeEeccccccc
Q psy11602 134 LEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQK------I--YATACATTRVICAILETHQTETGVRIPDCLRKF 205 (1083)
Q Consensus 134 iE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~------~--n~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~ 205 (1083)
+.+ ....++..+++++ ..+.+++.||+++|.+.+|. + ++.| +++|+|++|+|+|. .+||..|+|+
T Consensus 274 ~~~-~d~~gr~~q~~Ti-qld~~~~~rf~l~y~~~~g~~~~P~~ih~~~~G-g~eRli~~Lie~~~----g~~P~~laP~ 346 (460)
T 3uh0_A 274 IMV-TDHLRKTHQVATI-QLDFQLPERFDLKFKDQDNSYKRPIMIHRATFG-SIERFMALLIDSNE----GRWPFWLNPY 346 (460)
T ss_dssp EEE-ECTTSCEEEEEEE-EEESHHHHHTTCCEECTTSCEECCEEEEEEEEE-EHHHHHHHHHHHHT----TCCCGGGCSC
T ss_pred EEE-EccCCCeeeeccc-ccccccccccceEEECCCCCccCcEEEecCcch-HHHHHHHHHHHHcC----CCCCCCCCCc
Confidence 443 3456677777775 56667899999999987764 2 3556 78999999999863 4799999999
Q ss_pred c
Q psy11602 206 V 206 (1083)
Q Consensus 206 ~ 206 (1083)
+
T Consensus 347 q 347 (460)
T 3uh0_A 347 Q 347 (460)
T ss_dssp C
T ss_pred e
Confidence 7
No 35
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=99.82 E-value=3.6e-22 Score=244.01 Aligned_cols=179 Identities=18% Similarity=0.286 Sum_probs=137.6
Q ss_pred CCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHH
Q psy11602 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESW 93 (1083)
Q Consensus 14 ~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~ 93 (1083)
.|+.+++++|+||+|.+++.+|++++.||++||+|+||+++|||+|.++ +++||+|+|||+|.|++.|+.++ +++
T Consensus 320 ~d~~~~~~~LrP~~~~~~~~~~~~~~~syr~LPlr~~~~g~~fR~E~~g---~~~GL~R~ReF~q~d~~~f~~~~--~~~ 394 (642)
T 1qf6_A 320 TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSG---SLHGLMRVRGFTQDDAHIFCTEE--QIR 394 (642)
T ss_dssp EEETTEEEEECSSSHHHHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGG---GCBTTTBCSEEEEEEEEEEECGG--GHH
T ss_pred eecCCceEEecCCCCHHHHHHHHhhhhhccccCeEEEEeccEEecCCCc---cccCCceeeeEEEccEEEEcCHH--HHH
Confidence 4667789999999999999999999999999999999999999999942 78899999999999999999764 589
Q ss_pred HHHHHHHHHHHHHHHHcCC-ceEEEEeccCCCCcccceeEeEEEEecCC--------------------Cce----eEE-
Q psy11602 94 KMLDEMIQNSEEFYADLGI-AYRVVNIVSGALNHAAAKKLDLEAWFPGS--------------------GAF----REL- 147 (1083)
Q Consensus 94 ~~~~~~~~~y~~if~~LgL-pyrvv~~~sgdlg~~as~~~diE~~~P~~--------------------~~~----~ev- 147 (1083)
+.++++++.+.+||+.||| +|++ .+.+++ +.+..|.|+|.++. +.| .++
T Consensus 395 ~e~~~~i~~~~~i~~~lGl~~~~v-~l~~~~----e~~~g~~e~w~~a~~~l~~~l~~~g~~~~~~~g~~afygpk~d~~ 469 (642)
T 1qf6_A 395 DEVNGCIRLVYDMYSTFGFEKIVV-KLSTRP----EKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFT 469 (642)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCCEE-EEECCC----SSCCSCHHHHHHHHHHHHHHHHTTTCCCEEETTCSCTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCceEE-EEecCc----ccccCCHHHHHHHHHHHHHHHHHcCCCcEEcCCCcccccCcccEE
Confidence 9999999999999999999 8987 555543 11222223332211 100 000
Q ss_pred -----EEcCCCc----hhh-hhcccceeccCCCc-----c-c-cccccchhheeheeccccCCCeeEecccccccc
Q psy11602 148 -----VSCSNCL----DYQ-SRRLLVRYGQTKQK-----I-Y-ATACATTRVICAILETHQTETGVRIPDCLRKFV 206 (1083)
Q Consensus 148 -----~s~s~cg----dyq-s~rl~i~y~~~~~~-----~-n-~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~ 206 (1083)
+...+|| ||+ ++|++++|.+.+|. | + +...+++|+|++|+|+|++ .||..|+|++
T Consensus 470 ~~d~~G~~~~~gti~~df~l~~r~~~~y~~~~g~~~~P~~~hrai~G~ieR~i~~liE~~~~----~~P~~laP~q 541 (642)
T 1qf6_A 470 LYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAG----FFPTWLAPVQ 541 (642)
T ss_dssp EECTTCCEEEEEEEEEESSHHHHTTCCEECTTSCEECCEEEEEEEEEEHHHHHHHHHHHHTT----CCCTTTCSSC
T ss_pred EEccCCceEEeeeEEEeccCCccCCCEEEecCCCCcCcEEEEeccCCCHHHHHHHHHHHhcC----CCCcccCCce
Confidence 1111344 777 99999999876653 2 2 2212789999999999875 7999999987
No 36
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=99.81 E-value=1.4e-21 Score=226.66 Aligned_cols=180 Identities=15% Similarity=0.248 Sum_probs=136.3
Q ss_pred CCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHH
Q psy11602 14 EKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESW 93 (1083)
Q Consensus 14 ~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~ 93 (1083)
.|+.+++++|+||+|.+++.++++++.+|++||+|+||+++|||+|.+ .+++||+|+|||+|.|++.|+.+ ++++
T Consensus 79 ~d~~~~~~~LrP~~~~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~---~p~~Gl~R~reF~q~d~~~f~~~--~~~~ 153 (401)
T 1evl_A 79 TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPS---GSLHGLMRVRGFTQDDAHIFCTE--EQIR 153 (401)
T ss_dssp EEETTEEEEECSCSHHHHHHHHTSSCCBGGGCSEEEEEEEEEECCCCG---GGCBTTTBCSEEEEEEEEEEECG--GGHH
T ss_pred EecCCceEEEcCCCCHHHHHHHHhhhhhhhhCChhhccccceecCCCC---cccccccccCcEEecceEEeCCH--HHHH
Confidence 567788999999999999999999999999999999999999999994 16889999999999999999864 5699
Q ss_pred HHHHHHHHHHHHHHHHcCC-ceEEEEeccCC---CCccc------------------------------ceeEeEEEEec
Q psy11602 94 KMLDEMIQNSEEFYADLGI-AYRVVNIVSGA---LNHAA------------------------------AKKLDLEAWFP 139 (1083)
Q Consensus 94 ~~~~~~~~~y~~if~~LgL-pyrvv~~~sgd---lg~~a------------------------------s~~~diE~~~P 139 (1083)
+.|++++++|.+||++||| +|++. +.+++ +|..+ ..++|+.+.-.
T Consensus 154 ~e~~e~i~~~~~~~~~lgl~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~l~~~g~~~~~~~~~~~~y~~~~d~~~~~~ 232 (401)
T 1evl_A 154 DEVNGCIRLVYDMYSTFGFEKIVVK-LSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDC 232 (401)
T ss_dssp HHHHHHHHHHHHHHHTTTCSCCEEE-EECCCSSCCSCHHHHHHHHHHHHHHHHHTTCCCEEETTCSBTTBCEEEEEEECT
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEE-EecCCcccCCCHHHHHHHHHHHHHHHHhcCCCceecCCCccccCCCcCeEEEec
Confidence 9999999999999999999 88874 44443 11100 01133322111
Q ss_pred CCCceeEEEEcCCCchhh-hhcccceeccCCCc-----cccccc--cchhheeheeccccCCCeeEecccccccc
Q psy11602 140 GSGAFRELVSCSNCLDYQ-SRRLLVRYGQTKQK-----IYATAC--ATTRVICAILETHQTETGVRIPDCLRKFV 206 (1083)
Q Consensus 140 ~~~~~~ev~s~s~cgdyq-s~rl~i~y~~~~~~-----~n~tg~--a~~Rli~Alle~~~~~~Gi~lP~~L~p~~ 206 (1083)
.+..-..+++. .||+ +++++++|.+.+|. |...++ +++|+|++|+|+|++ .||..++|+.
T Consensus 233 -~G~~~~~gt~~--~d~~l~~~~~~~y~~~~g~~~~p~~~~~~~~GgieRli~~l~e~~~~----~~p~~~ap~~ 300 (401)
T 1evl_A 233 -LDRAWQCGTVQ--LDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAG----FFPTWLAPVQ 300 (401)
T ss_dssp -TCCEEEEEEEE--EESSHHHHTTCCEECTTSCEECCEEEEEEEEEEHHHHHHHHHHHHTT----CCCTTTCSSC
T ss_pred -CCCeEEeeeee--eccccccccCCEEECCCCCCcCcEEEEecCCCcHHHHHHHHHHHhCC----cCCCCCCCeE
Confidence 12212233322 3677 99999999876553 322233 789999999999874 6888888875
No 37
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1
Probab=99.80 E-value=6.8e-20 Score=215.89 Aligned_cols=226 Identities=16% Similarity=0.223 Sum_probs=179.6
Q ss_pred ccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc--ceEEEEee
Q psy11602 200 DCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE--KVEQFVLT 277 (1083)
Q Consensus 200 ~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd--~~~~~~~~ 277 (1083)
..|..++-+.+. ..||.++..|+++..+.-.+. .++.+.+.. .+|++.... +-+.-...
T Consensus 42 ~~i~~~~~~~~~-~~G~~ei~tP~l~~~~l~~~~---------------~G~~~~~~~---emy~~~d~g~~~~~~~l~L 102 (459)
T 1nj8_A 42 RYTFEIIRNLLD-ESGHDEALFPMLIPEDLLAKE---------------AEHIKGFED---EVYWVTHGGKTQLDVKLAL 102 (459)
T ss_dssp HHHHHHHHHHHH-HTTCEECBCCSEEEHHHHHHH---------------CSSSGGGGG---GCEEEEESSSSEEEEEEEE
T ss_pred HHHHHHHHHHHH-HcCCEEeeCCcccCHHHHhhh---------------cCcccccch---hhEEEeccCcccCCCeeEE
Confidence 455666655553 789999999999995544221 222222333 456554321 11222223
Q ss_pred CCCC-----------Ccchhhhh-hhhccccccccccc-CcCceeEEEee-eEEEEE-EeCCCchhHHHHHHHHHHHHHH
Q psy11602 278 SPHD-----------DESWKMLD-EMIQNSEEFYADLD-TRGIFRVHQFE-KVEQFV-LTSPHDDESWKTLDEMIQNSEE 342 (1083)
Q Consensus 278 ~~~~-----------~~s~~~~~-~~~~~~~~~~~~~~-trGl~Rvhqf~-kvE~f~-~~~~~~~~s~~~~e~~~~~~e~ 342 (1083)
.|.. -.||++|| ++++...+||+.+. ++||+|+|||. +.+... .+++ +++++.+++|+..+.+
T Consensus 103 RP~~~~~i~~~~~~~~~s~r~LP~rl~qig~~fR~E~~~~rGl~R~REF~qq~d~~~~~~~~--~~a~~e~~~~i~~~~~ 180 (459)
T 1nj8_A 103 RPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTK--EEAENQVKEAISIYKK 180 (459)
T ss_dssp CSSSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCCSCCBTTTBCSBCSCEEEEEEEESSH--HHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHhhhhcccCCeEEEEEccEecCccCCCCCceEeeeeeccCcEEEEECCH--HHHHHHHHHHHHHHHH
Confidence 3321 23788999 99999999999888 99999999999 999765 4555 6889999999999999
Q ss_pred HHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEeecccc
Q psy11602 343 FYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATA 422 (1083)
Q Consensus 343 ~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htln~t~ 422 (1083)
||+.|||||++...+..|.++++..++|||+||| .++..|+++++++++++|++++++|.+. +|+..++|+ +|.|
T Consensus 181 ~~~~LGl~~~~~~~~~~ek~~ga~~~~~ie~~~~-dg~~~e~gt~~~lg~~~s~~~~~~Y~~~---~G~~~~v~~-~~~G 255 (459)
T 1nj8_A 181 FFDTLGIPYLISKRPEWDKFPGAEYTMAFDTIFP-DGRTMQIATVHNLGQNFSKTFEIIFETP---TGDKDYAYQ-TCYG 255 (459)
T ss_dssp HHHHHTCCCEEEEECTTSCCTTCSEEEEEEEECT-TSCEEEEEEEEEEETHHHHHTTCEEECT---TSSEEECEE-EEEE
T ss_pred HHHHCCCceEEeecCchhhcCCcccceeEEEEcC-CCcEEEEEEEeecccccccccCeEEECC---CCCEeeeeE-eecc
Confidence 9999999999999999999999999999999999 4888999999999999999999999874 456789998 6999
Q ss_pred cchhHHHHHHHhhccCCCceecCccccccC
Q psy11602 423 CATTRVICAILETHQTETGVRIPDCLRKFV 452 (1083)
Q Consensus 423 ~a~~R~i~ailEn~q~~~Gi~iP~~L~py~ 452 (1083)
++ +|+|.||+|+|++++|+++|..|+|+.
T Consensus 256 ig-eRli~alie~~~d~~gl~~P~~laP~q 284 (459)
T 1nj8_A 256 IS-DRVIASIIAIHGDEKGLILPPIVAPIQ 284 (459)
T ss_dssp EC-THHHHHHHHHHCBTTBCCCCTTSCSSS
T ss_pred HH-HHHHHHHHHHhCCCceeEcCCcCCCCc
Confidence 99 999999999999999999999999974
No 38
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B*
Probab=99.78 E-value=1.4e-19 Score=212.42 Aligned_cols=175 Identities=13% Similarity=0.107 Sum_probs=135.2
Q ss_pred CCeeEec-CChHHHHHHHhcccCCCC-CCCceEeeeccccc---cccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHH
Q psy11602 19 DDKYLIA-TSEQPICAVHRDSWLPEA-SLPIRYLGVSTCFR---QEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESW 93 (1083)
Q Consensus 19 ~~~~L~p-TsE~~i~~l~~~~i~s~~-~LPlklyqi~~~fR---~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~ 93 (1083)
+.++|+| |++ .+...|.+++.+++ +||++++||+++|| +|+ +++.||+|+|||+|.|+++|++|+ ++.
T Consensus 135 ~~~~LRPeta~-g~~~~f~~~~~s~r~~LP~~~aqig~~fR~~~nE~----s~~~Gl~R~REF~q~E~~~F~~pe--~~~ 207 (454)
T 1g5h_A 135 TSGKLRATLLH-GALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNSN----QTPSSVTRVGEKTEASLVWFTPTR--TSS 207 (454)
T ss_dssp HSCEECSCSHH-HHHHTHHHHHHHTTTBSCEEEEEEEEEEEEEC-------------CEEEEEEEEEEEEEECHH--HHH
T ss_pred cceeecccccH-HHHHHHhhhHhhcccCCCEEEEEeeeeccCCcccc----cCCCCccccCceehhheEEEeCHh--hHH
Confidence 4789999 555 45555667777777 99999999999999 699 347899999999999999999864 589
Q ss_pred HHHHHHHHHHHHHHHHcCCc---eEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhh------cccce
Q psy11602 94 KMLDEMIQNSEEFYADLGIA---YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSR------RLLVR 164 (1083)
Q Consensus 94 ~~~~~~~~~y~~if~~LgLp---yrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~------rl~i~ 164 (1083)
++|+.++..+.++|+.|||| +|..+... +. +..++|+|+++|. ++.++..|++++||+.+ +++++
T Consensus 208 e~~~~~~~~~~~~~~~lgi~~~~~r~~~~~~-~~---a~~~~~ie~~~p~--g~~e~~g~~~~td~~l~~~~~~s~~~l~ 281 (454)
T 1g5h_A 208 QWLDFWLRHRLLWWRKFAMSPSNFSSADCQD-EL---GRKGSKLYYSFPW--GKEPIETLWNLGDQELLHTYPGNVSTIQ 281 (454)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGEEEEEEEC-TT---SCEEEEEEEEETT--EEEEEEEEEEEESHHHHHHSTTCGGGSC
T ss_pred HHHHHHHHHHHHHHHHcCCCceeEEecCCHH-HH---HhcCCCcEEecCC--CceEEEEecCCCHHHHHhccCCceeeEE
Confidence 99999999999999999998 66554322 22 5789999999995 67889999999999865 35899
Q ss_pred eccCCCc----cccccccchhheeheeccccCC-------------CeeEecccccccc
Q psy11602 165 YGQTKQK----IYATACATTRVICAILETHQTE-------------TGVRIPDCLRKFV 206 (1083)
Q Consensus 165 y~~~~~~----~n~tg~a~~Rli~Alle~~~~~-------------~Gi~lP~~L~p~~ 206 (1083)
|.+.+.. |-.++++++|+|+|||+.+.++ .+++||..|+|+.
T Consensus 282 y~d~~~~~~P~vi~~s~Gv~R~i~aile~~~~~~~~~~~~g~d~~r~~l~~P~~lAP~q 340 (454)
T 1g5h_A 282 GRDGRKNVVPCVLSVSGDVDLGTLAYLYDSFQLAENSFARKKSLQRKVLKLHPCLAPIK 340 (454)
T ss_dssp EEETTEEECCEEEEEEEEHHHHHHHHHHHHEEC------------CCEECCCTTTCSCC
T ss_pred EECCCCcEeeEEEeCcccHHHHHHHHHHHhcchhhcccccCCcccceeEecCcccCCCe
Confidence 9875421 5456789999998888876442 2689999999987
No 39
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=99.76 E-value=1.2e-19 Score=216.10 Aligned_cols=163 Identities=18% Similarity=0.233 Sum_probs=141.7
Q ss_pred cch-hhhh-hhhcccccccccccCc-CceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCcEEEEeccC-
Q psy11602 283 ESW-KMLD-EMIQNSEEFYADLDTR-GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIVS- 358 (1083)
Q Consensus 283 ~s~-~~~~-~~~~~~~~~~~~~~tr-Gl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lpyRvv~~~~- 358 (1083)
.|| ++|| ++++...|||+...++ ||+|+|||+++|+..++.| +++.+.+++|+..+.+||+.|||||++|++.+
T Consensus 202 ~sy~r~LP~rl~qig~~FR~E~~pr~GL~R~REF~q~d~~~f~~~--e~~~~~~~~~i~~~~~i~~~LGl~~~~v~~~~~ 279 (505)
T 1ati_A 202 DATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRP--GEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQ 279 (505)
T ss_dssp HHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEEEEEECG--GGHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred HhcCCCCCEEEEEeeceeeCCCCCCCCCCcccceEEeeEEEEECH--HHHHHHHHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 466 7899 9999999999984465 9999999999999999999 68999999999999999999999988787775
Q ss_pred --CCcchhhhceeeEEEeeCCCCcEEeeecccCccccc-----c----------------cccceEEecccCCCCceeeE
Q psy11602 359 --GALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQ-----S----------------RRLLVRYGQTKKMNEKIEFV 415 (1083)
Q Consensus 359 --~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~q-----a----------------rrl~iry~~~~~~~~~~~~~ 415 (1083)
+++.+.+..++|+|+|+|. .|.|+.+|++++||+ + +|++++|.+. +++.+|+
T Consensus 280 ~~~~~~~~~~~~~d~E~~~p~--~~~e~~g~~~~~d~~L~~~~~~~~~~~~~~~~~~n~~~~~~~~y~d~---~g~~~y~ 354 (505)
T 1ati_A 280 PPESSAHYAKATVDILYRFPH--GSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDP---ETGKWFV 354 (505)
T ss_dssp CTTTSCTTCSEEEEEEEEETT--EEEEEEEEEECTTHHHHHHCSSTTTTTCCSCCCCCSCCCSCCCEECS---SSCCEEC
T ss_pred ChHhhhcccHHHHhHHhhcCC--CCccchhhhcccceecchhhccccccceeeeecccccceeEEEEEcC---CCCeeec
Confidence 6677788899999999995 699999999999998 3 7899999875 3456778
Q ss_pred EeecccccchhHHHHHHHhhccC---------CCceecCccccccC
Q psy11602 416 HMLNATACATTRVICAILETHQT---------ETGVRIPDCLRKFV 452 (1083)
Q Consensus 416 htln~t~~a~~R~i~ailEn~q~---------~~Gi~iP~~L~py~ 452 (1083)
+++.|.+++++|+|+||+|++++ +.|+++|..|+||.
T Consensus 355 p~vig~s~GieRli~alle~~~~~~~~~~gd~~~gl~~p~~laP~~ 400 (505)
T 1ati_A 355 PYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIK 400 (505)
T ss_dssp CEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCGGGCSCS
T ss_pred ceEEEEeeEHHHHHHHHHHHHhhhcccccccccccccCCcccCCce
Confidence 87789999999999999999843 34589999999974
No 40
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=99.76 E-value=8.2e-19 Score=207.48 Aligned_cols=226 Identities=16% Similarity=0.165 Sum_probs=176.3
Q ss_pred ccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc--ceEEEEee
Q psy11602 200 DCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE--KVEQFVLT 277 (1083)
Q Consensus 200 ~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd--~~~~~~~~ 277 (1083)
..|..++-+.+ ...||.++..|+++..+.-.+. .++.+.+.+ .||++.... +.+.-...
T Consensus 48 ~~I~~~~r~~~-~~~G~~ei~tP~l~~~el~~~~---------------sgh~d~f~~---emy~~~d~g~~~l~~~l~L 108 (477)
T 1hc7_A 48 ENIQQVLDRMF-KETGHQNAYFPLFIPMSFLRKE---------------AEHVEGFSP---ELAVVTHAGGEELEEPLAV 108 (477)
T ss_dssp HHHHHHHHHHH-HHTTCEECBCCSEEESTTC------------------------CCT---TCEEEEEESSSEEEEEEEE
T ss_pred HHHHHHHHHHH-HHcCCEEEecCccccHHHHhhc---------------CCccccccc---ceEEEECCCCccCCCeEEE
Confidence 44555555555 3789999999999984333211 233334444 466654321 12222233
Q ss_pred CCCC-----------Ccchhhhh-hhhcccccccccccCcCceeEEEeeeEEEEE-EeCCCchhHHHHHHHHHHHHHHHH
Q psy11602 278 SPHD-----------DESWKMLD-EMIQNSEEFYADLDTRGIFRVHQFEKVEQFV-LTSPHDDESWKTLDEMIQNSEEFY 344 (1083)
Q Consensus 278 ~~~~-----------~~s~~~~~-~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~-~~~~~~~~s~~~~e~~~~~~e~~~ 344 (1083)
.|.. -.||++|| ++++...+||+.+.++||+|+|||.+.|... .+++ +++++.+..|++.+.+||
T Consensus 109 RP~~~~~i~~~~~~~~~s~r~LP~rl~qig~vfR~E~~~rGl~R~REF~q~d~~~~~~~~--~~ad~E~~~~l~~~~~i~ 186 (477)
T 1hc7_A 109 RPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATR--EEAEEEVRRMLSIYARLA 186 (477)
T ss_dssp CSCSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESSH--HHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHhhhhccccCCeeeEeecCEEeCCCCCCCcceeEEEEEccEEEEeCCH--HHHHHHHHHHHHHHHHHH
Confidence 4432 14788999 9999999999998899999999999999998 4555 688999999999999999
Q ss_pred -HHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEeeccccc
Q psy11602 345 -ADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATAC 423 (1083)
Q Consensus 345 -~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htln~t~~ 423 (1083)
+.|||||++..-+..+..+++..++|||+|||. ++..+++++.+++..+|++++++|.+. +|+..++|+ +|.|+
T Consensus 187 ~~~Lgl~~~~~~~~~~e~~~g~~~~~~ie~~~~d-gr~~~~gt~~~lg~~~s~~~g~~y~~~---~G~~~~~~~-~~~Gi 261 (477)
T 1hc7_A 187 REYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKD-GKALQAGTSHYLGENFARAFDIKFQDR---DLQVKYVHT-TSWGL 261 (477)
T ss_dssp HHHHCCCCEEEECCTTTSCTTSSEEEEEEEECTT-SCEEEEEEEEEEETHHHHHTTCEEECT---TSCEEECEE-EEEEE
T ss_pred HHhcCCeEEEEeCChHHhcCCcccceEEEEEcCC-CcEEEEeeeEEcccccccccCeEEECC---CCCEEeeeE-eeccH
Confidence 899999999988888999999899999999994 778899999988887899999999865 456679998 58888
Q ss_pred chhHHHHHHHhhccCCCceecCccccccC
Q psy11602 424 ATTRVICAILETHQTETGVRIPDCLRKFV 452 (1083)
Q Consensus 424 a~~R~i~ailEn~q~~~Gi~iP~~L~py~ 452 (1083)
. +|+|++|+|+|++++|+++|..|+|+.
T Consensus 262 g-eRli~~lie~~~d~~gl~~P~~laP~q 289 (477)
T 1hc7_A 262 S-WRFIGAIIMTHGDDRGLVLPPRLAPIQ 289 (477)
T ss_dssp E-THHHHHHHHHHCBTTBCCCCTTTCSCS
T ss_pred H-HHHHHHHHHHhCccccccCCcccCCce
Confidence 8 999999999999999999999999974
No 41
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Probab=99.71 E-value=6.6e-19 Score=215.82 Aligned_cols=181 Identities=15% Similarity=0.209 Sum_probs=135.9
Q ss_pred CCCCC-CCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 14 EKDEL-DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 14 ~dr~~-~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
.|+.+ ++++|+||++.+++.+++++..||++||+|+|+++++||+|.. .+++||+|+|||+|.|++.|+.++ .+
T Consensus 321 ~d~~~~~~~~LrP~~~~~~~~~~~~~~~syr~LPlrl~~~g~~fR~E~~---~~~~GL~R~ReF~Q~d~~~f~~~~--~~ 395 (645)
T 1nyr_A 321 MQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEAS---GAVSGLQRVRGMTLNDSHIFVRPD--QI 395 (645)
T ss_dssp EEETTTEEEEECSSSHHHHHHHHHTSCCBGGGCCEEEEEEEEEECCCCT---TTCBTTTBCSEEEEEEEEEEECGG--GH
T ss_pred EecCCCeEEEeCCCCCHHHHHHHHhhhhhccCCCeEEEEeccEEecCCC---ccccCcceeeeEEEccEEEEcCHH--HH
Confidence 47778 8999999999999999999999999999999999999999994 267899999999999999999876 47
Q ss_pred HHHHHHHHHHHHHHHHHcCC-ceEEEEeccCCCCcccceeEeEEEEe---------------------------------
Q psy11602 93 WKMLDEMIQNSEEFYADLGI-AYRVVNIVSGALNHAAAKKLDLEAWF--------------------------------- 138 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgL-pyrvv~~~sgdlg~~as~~~diE~~~--------------------------------- 138 (1083)
.+.|.+++..+.++|+.||| +|++ .+.+..++..+.+..+.|.|.
T Consensus 396 ~d~~~e~i~~~~~~l~~lGl~~~~~-~l~~~~~~~~e~~~g~~e~~~~~~~~l~~~l~~~g~~~~~~~~~~~~ygpki~~ 474 (645)
T 1nyr_A 396 KEEFKRVVNMIIDVYKDFGFEDYSF-RLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDV 474 (645)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEE-EEEECCCCCSSSSSCCHHHHHHHHHHHHHHHHHHCCCCCCEESCSBTTBCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEE-EEeCCCcccchhhcCChHHHHHHHHHHHHHHHHcCCCeEecCCCCceeCCccce
Confidence 78899999999999999999 6876 444444321111111112221
Q ss_pred --c-CCCceeEEEEcCCCchhh-hhcccceeccCCCc-----c-c-cccccchhheeheeccccCCCeeEecccccccc
Q psy11602 139 --P-GSGAFRELVSCSNCLDYQ-SRRLLVRYGQTKQK-----I-Y-ATACATTRVICAILETHQTETGVRIPDCLRKFV 206 (1083)
Q Consensus 139 --P-~~~~~~ev~s~s~cgdyq-s~rl~i~y~~~~~~-----~-n-~tg~a~~Rli~Alle~~~~~~Gi~lP~~L~p~~ 206 (1083)
. +.++..++++.. -||+ +++|++.|.+.+|. | + +...+++|+|++|+|+|++ .||..|+|++
T Consensus 475 ~~~d~lg~~~~~gtiq--~D~~l~~~~d~~Y~~~~g~~~~P~~ih~~~~GgieR~i~~liE~~~~----~~P~~lap~q 547 (645)
T 1nyr_A 475 QVKTAMGKEETLSTAQ--LDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKG----AFPTWLAPKQ 547 (645)
T ss_dssp EECCTTSCCEEEEEEE--EESSHHHHTTCCEECTTSCEECCEEEEEEEEEEHHHHHHHHHHHHTT----CCCTTTCSSC
T ss_pred ehhhhhCchhhcceEE--eecccccccceEEECCCCCccCcEEEEeccCCcHHHHHHHHHHHhcC----CCCCCCCCce
Confidence 1 112222322211 2343 89999999876653 2 2 4444689999999999765 7898899986
No 42
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=99.67 E-value=4.8e-18 Score=207.75 Aligned_cols=217 Identities=14% Similarity=0.201 Sum_probs=163.2
Q ss_pred ccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeeccceEEEEeeC-
Q psy11602 200 DCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKVEQFVLTS- 278 (1083)
Q Consensus 200 ~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd~~~~~~~~~- 278 (1083)
..|..++-+.+. ..||.+|..|++...+..+.. ++.+.+.+ .||+ ..-+. +++.+-.
T Consensus 275 ~~l~~~~r~~~~-~~Gy~ev~tP~l~~~~l~~~s----------------Gh~~~~~~---~my~-~d~~~-~~~~LrP~ 332 (642)
T 1qf6_A 275 RELEVFVRSKLK-EYQYQEVKGPFMMDRVLWEKT----------------GHWDNYKD---AMFT-TSSEN-REYCIKPM 332 (642)
T ss_dssp HHHHHHHHHHHH-HTTCEECCCCSEEETHHHHHH----------------SHHHHHGG---GCEE-EEETT-EEEEECSS
T ss_pred HHHHHHHHHHHH-HcCCEEEECCcCccHHHHhhc----------------Cccccccc---ccee-eecCC-ceEEecCC
Confidence 566777766664 789999999999996555332 33333344 3565 22111 2222211
Q ss_pred ---------CCCCcchhhhh-hhhccccccccccc--CcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHH
Q psy11602 279 ---------PHDDESWKMLD-EMIQNSEEFYADLD--TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYAD 346 (1083)
Q Consensus 279 ---------~~~~~s~~~~~-~~~~~~~~~~~~~~--trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~ 346 (1083)
.+...||++|| ++++...|||+... .+||+|+|||++++...|+.| +++++.+++++..+.++|+.
T Consensus 333 ~~~~~~~~~~~~~~syr~LPlr~~~~g~~fR~E~~g~~~GL~R~ReF~q~d~~~f~~~--~~~~~e~~~~i~~~~~i~~~ 410 (642)
T 1qf6_A 333 NCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTE--EQIRDEVNGCIRLVYDMYST 410 (642)
T ss_dssp SHHHHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECG--GGHHHHHHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHhhhhhccccCeEEEEeccEEecCCCccccCCceeeeEEEccEEEEcCH--HHHHHHHHHHHHHHHHHHHH
Confidence 12235889999 99999999999776 899999999999999999987 57899999999999999999
Q ss_pred hCC-cEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeeccc------------------------------Ccc----
Q psy11602 347 LGI-AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS------------------------------NCL---- 391 (1083)
Q Consensus 347 L~l-pyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~s------------------------------n~~---- 391 (1083)
||| ||++ .+++++ +.+..|.|+|.|+.+.++|+.+++ +|+
T Consensus 411 lGl~~~~v-~l~~~~----e~~~g~~e~w~~a~~~l~~~l~~~g~~~~~~~g~~afygpk~d~~~~d~~G~~~~~gti~~ 485 (642)
T 1qf6_A 411 FGFEKIVV-KLSTRP----EKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQL 485 (642)
T ss_dssp GTCCCCEE-EEECCC----SSCCSCHHHHHHHHHHHHHHHHTTTCCCEEETTCSCTTCCEEEEEEECTTCCEEEEEEEEE
T ss_pred cCCCceEE-EEecCc----ccccCCHHHHHHHHHHHHHHHHHcCCCcEEcCCCcccccCcccEEEEccCCceEEeeeEEE
Confidence 999 8998 677765 566778899988776666665554 677
Q ss_pred ccc-ccccceEEecccCCCCceeeEE-eecccccchhHHHHHHHhhccCCCceecCccccccC
Q psy11602 392 AYQ-SRRLLVRYGQTKKMNEKIEFVH-MLNATACATTRVICAILETHQTETGVRIPDCLRKFV 452 (1083)
Q Consensus 392 d~q-arrl~iry~~~~~~~~~~~~~h-tln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~ 452 (1083)
||| ++|++++|.+..+.....-.+| +++|+ ++|+|++|+|+|+. .+|..|+|+.
T Consensus 486 df~l~~r~~~~y~~~~g~~~~P~~~hrai~G~---ieR~i~~liE~~~~----~~P~~laP~q 541 (642)
T 1qf6_A 486 DFSLPSRLSASYVGEDNERKVPVMIHRAILGS---MERFIGILTEEFAG----FFPTWLAPVQ 541 (642)
T ss_dssp ESSHHHHTTCCEECTTSCEECCEEEEEEEEEE---HHHHHHHHHHHHTT----CCCTTTCSSC
T ss_pred eccCCccCCCEEEecCCCCcCcEEEEeccCCC---HHHHHHHHHHHhcC----CCCcccCCce
Confidence 888 9999999986532111123568 88884 79999999999984 7999999985
No 43
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A
Probab=99.63 E-value=8.5e-17 Score=190.28 Aligned_cols=182 Identities=13% Similarity=0.096 Sum_probs=136.2
Q ss_pred CCCCCCeeEecCChHHHHHHHhcccCCCC---CCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchH
Q psy11602 15 KDELDDKYLIATSEQPICAVHRDSWLPEA---SLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDE 91 (1083)
Q Consensus 15 dr~~~~~~L~pTsE~~i~~l~~~~i~s~~---~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~ 91 (1083)
|+.++.++|+||+|.+++.++++++.+|+ +||+|+||++++||+|.+++ ++||+|+|||++.+++.|+.++ .
T Consensus 99 d~~~~~l~LRP~~t~~i~~~~~~~~~s~r~~~~lP~rl~~~g~vfR~E~~~~---~~Gl~R~REF~Q~~~e~f~~~~--~ 173 (471)
T 3a32_A 99 DIEGHEFAVKPMNCPYHILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSGS---IYGLLRVRGFTQDDAHIIVPGG--R 173 (471)
T ss_dssp EETTEEEEECSCSHHHHHHHHHHHHHHHGGGSCSSEEEEEEEEEECCCCGGG---CBTTTBCSEEEEEEEEEEEEGG--G
T ss_pred ecCCcEEEEccccHHHHHHHHHhhhhhccccccCCeEEeeccceeccCCCcc---cccceeEEEEEECCeEEEcChH--H
Confidence 67788999999999999999999999998 99999999999999999542 4899999999999999999876 3
Q ss_pred HHHHHHHHHHHHHHHHHH-cCC-----ceEEEEeccC-----CCCcccceeE----------------------------
Q psy11602 92 SWKMLDEMIQNSEEFYAD-LGI-----AYRVVNIVSG-----ALNHAAAKKL---------------------------- 132 (1083)
Q Consensus 92 s~~~~~~~~~~y~~if~~-LgL-----pyrvv~~~sg-----dlg~~as~~~---------------------------- 132 (1083)
+.+.|.+++.+|.++|+. ||| +|+++..... +-..+....+
T Consensus 174 ~~de~~e~i~~~~~~l~~~lGl~~~~~~~~l~i~~~~~~~~~e~~~g~~~~~d~~~~~l~~~~~~~l~~~~~~~~~~~~~ 253 (471)
T 3a32_A 174 VIDVVYDVFEEMKLVLERLFKLGVSSETFKVRLSMSDKSLIGKEFMGSKEEWEGAEEALREAASRINEKYGIDIVELEGE 253 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCCSTTTEEEEEECCCGGGBTTTBCSCHHHHHHHHHHHHHHHHHHHHHHCCEEEEETTC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcCCCCeEEEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHhcCCceEecccc
Confidence 888999999999999999 999 5887655442 2111100000
Q ss_pred ------eEEEEecC----CCceeEEEEcCCCchhhhhcccceecc--CCCc-----cc-cccccchhheeheeccccCCC
Q psy11602 133 ------DLEAWFPG----SGAFRELVSCSNCLDYQSRRLLVRYGQ--TKQK-----IY-ATACATTRVICAILETHQTET 194 (1083)
Q Consensus 133 ------diE~~~P~----~~~~~ev~s~s~cgdyqs~rl~i~y~~--~~~~-----~n-~tg~a~~Rli~Alle~~~~~~ 194 (1083)
.++..+.. .+...++++ ...+...++.|+++|-+ .+|+ ++ +.+.+++|+|+++|+++.
T Consensus 254 ~~~~gp~i~~~l~d~~~~l~~~~~~g~-~~lD~~l~r~~d~~Yyt~~~~G~~e~~~i~~~i~GgieRli~~lie~~~--- 329 (471)
T 3a32_A 254 AAFYGPKLDFIMMVEESGVSKEWQMGT-IQFDFNLPRRFRLYDVVREEFGIEEVYIIHRALLGSIERFLGVYLEHRR--- 329 (471)
T ss_dssp SBTTBCEEEEEEEEESSSCEEEEEEEE-EEEESSHHHHTTHHHHHHHHHCCSCEEEEEEEEEEEHHHHHHHHHHHTT---
T ss_pred hhhCCCccceEEeccHHhhhhhheeee-EEecccccccCCceEeccccCCceeeEEEeccccCcHHHHHHHHHHHhC---
Confidence 23444432 234444442 23344468999998877 3333 32 233378999999999864
Q ss_pred eeEecccccccc
Q psy11602 195 GVRIPDCLRKFV 206 (1083)
Q Consensus 195 Gi~lP~~L~p~~ 206 (1083)
| .||..++|+.
T Consensus 330 g-~~p~~~ap~q 340 (471)
T 3a32_A 330 G-RMPFTLAPIQ 340 (471)
T ss_dssp T-CCCGGGCSCS
T ss_pred C-CCCCCcCCce
Confidence 3 7898888876
No 44
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=99.55 E-value=3.7e-16 Score=181.20 Aligned_cols=213 Identities=15% Similarity=0.217 Sum_probs=146.4
Q ss_pred ccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeeccceEEEEeeC-
Q psy11602 200 DCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKVEQFVLTS- 278 (1083)
Q Consensus 200 ~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd~~~~~~~~~- 278 (1083)
.+|..++.+.+. ..||.+|..|++...+..+..+ +.+.+.+ .||+ ..-+. +++.+-.
T Consensus 34 ~~i~~~~~~~~~-~~G~~ei~tP~l~~~~l~~~sG----------------~~~~~~~---em~~-~d~~~-~~~~LrP~ 91 (401)
T 1evl_A 34 RELEVFVRSKLK-EYQYQEVKGPFMMDRVLWEKTG----------------HWDNYKD---AMFT-TSSEN-REYCIKPM 91 (401)
T ss_dssp HHHHHHHHHHHH-HTTCEECBCCSEEEHHHHHHHT----------------HHHHSGG---GCCE-EEETT-EEEEECSC
T ss_pred HHHHHHHHHHHH-HcCCEEEECCeeccHHHHHhcC----------------cHhhhch---hhEe-EecCC-ceEEEcCC
Confidence 556666655553 7899999999999966554322 2222222 2444 11111 1222111
Q ss_pred ---------CCCCcchhhhh-hhhccccccccccc--CcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHH
Q psy11602 279 ---------PHDDESWKMLD-EMIQNSEEFYADLD--TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYAD 346 (1083)
Q Consensus 279 ---------~~~~~s~~~~~-~~~~~~~~~~~~~~--trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~ 346 (1083)
.+.-.||++|| ++++...|||+.+. .+||+|+|||+++|...++.+ +++++.+++++..+.++|+.
T Consensus 92 ~~~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~p~~Gl~R~reF~q~d~~~f~~~--~~~~~e~~e~i~~~~~~~~~ 169 (401)
T 1evl_A 92 NCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTE--EQIRDEVNGCIRLVYDMYST 169 (401)
T ss_dssp SHHHHHHHHTSSCCBGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECG--GGHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhhhhhhhhCChhhccccceecCCCCcccccccccCcEEecceEEeCCH--HHHHHHHHHHHHHHHHHHHH
Confidence 11235788899 99999999999875 899999999999999999875 68899999999999999999
Q ss_pred hCC-cEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeeccc------------------------------Ccc----
Q psy11602 347 LGI-AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS------------------------------NCL---- 391 (1083)
Q Consensus 347 L~l-pyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~s------------------------------n~~---- 391 (1083)
||| ||++ .+.+++ +.+..|.|+|+++.+.+.++.+++ +|+
T Consensus 170 lgl~~~~~-~~~~~~----~~~~~~~~~~~~a~~~~~~~l~~~g~~~~~~~~~~~~y~~~~d~~~~~~~G~~~~~gt~~~ 244 (401)
T 1evl_A 170 FGFEKIVV-KLSTRP----EKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQL 244 (401)
T ss_dssp TTCSCCEE-EEECCC----SSCCSCHHHHHHHHHHHHHHHHHTTCCCEEETTCSBTTBCEEEEEEECTTCCEEEEEEEEE
T ss_pred cCCCceEE-EEecCC----cccCCCHHHHHHHHHHHHHHHHhcCCCceecCCCccccCCCcCeEEEecCCCeEEeeeeee
Confidence 999 8998 566665 344555556654433222221111 233
Q ss_pred ccc-ccccceEEecccCCCCcee---eEE-eecccccchhHHHHHHHhhccCCCceecCcccccc
Q psy11602 392 AYQ-SRRLLVRYGQTKKMNEKIE---FVH-MLNATACATTRVICAILETHQTETGVRIPDCLRKF 451 (1083)
Q Consensus 392 d~q-arrl~iry~~~~~~~~~~~---~~h-tln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py 451 (1083)
||| ++|++++|.+. +|+.. .+| +++| .++|+|++|+|+|+. .+|..++|+
T Consensus 245 d~~l~~~~~~~y~~~---~g~~~~p~~~~~~~~G---gieRli~~l~e~~~~----~~p~~~ap~ 299 (401)
T 1evl_A 245 DFSLPSRLSASYVGE---DNERKVPVMIHRAILG---SMERFIGILTEEFAG----FFPTWLAPV 299 (401)
T ss_dssp ESSHHHHTTCCEECT---TSCEECCEEEEEEEEE---EHHHHHHHHHHHHTT----CCCTTTCSS
T ss_pred ccccccccCCEEECC---CCCCcCcEEEEecCCC---cHHHHHHHHHHHhCC----cCCCCCCCe
Confidence 899 99999999865 33333 456 6666 379999999999984 688888885
No 45
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B*
Probab=99.55 E-value=5.8e-15 Score=173.45 Aligned_cols=156 Identities=13% Similarity=0.061 Sum_probs=123.8
Q ss_pred chh-hhh-hhhcccccccc---c-ccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCc---EEEE
Q psy11602 284 SWK-MLD-EMIQNSEEFYA---D-LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIA---YRVV 354 (1083)
Q Consensus 284 s~~-~~~-~~~~~~~~~~~---~-~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lp---yRvv 354 (1083)
|++ +|| ++.+...|||. . +-..||+|+|+|++.|+..||+| +++.++|+.++..+..||+.|||| ||..
T Consensus 157 s~r~~LP~~~aqig~~fR~~~nE~s~~~Gl~R~REF~q~E~~~F~~p--e~~~e~~~~~~~~~~~~~~~lgi~~~~~r~~ 234 (454)
T 1g5h_A 157 LVNRKLPFGLAQIGVCFHPVSNSNQTPSSVTRVGEKTEASLVWFTPT--RTSSQWLDFWLRHRLLWWRKFAMSPSNFSSA 234 (454)
T ss_dssp HTTTBSCEEEEEEEEEEEEEC---------CEEEEEEEEEEEEEECH--HHHHHHHHHHHHHHHHHHHTTCSSGGGEEEE
T ss_pred hcccCCCEEEEEeeeeccCCcccccCCCCccccCceehhheEEEeCH--hhHHHHHHHHHHHHHHHHHHcCCCceeEEec
Confidence 445 788 88888889993 3 33689999999999999999998 789999999999999999999999 8876
Q ss_pred eccCCCcchhhhceeeEEEeeCCCCcEEeeecccCcccccccc------cceEEecccCCCCceeeEEeecccccchhHH
Q psy11602 355 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSRR------LLVRYGQTKKMNEKIEFVHMLNATACATTRV 428 (1083)
Q Consensus 355 ~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qarr------l~iry~~~~~~~~~~~~~htln~t~~a~~R~ 428 (1083)
.... +. |..++|||+|+|. .|+|+.+|+|++||+.++ ++|+|.+. ++...+|+++ +++.++|+
T Consensus 235 ~~~~-~~---a~~~~~ie~~~p~--g~~e~~g~~~~td~~l~~~~~~s~~~l~y~d~----~~~~~P~vi~-~s~Gv~R~ 303 (454)
T 1g5h_A 235 DCQD-EL---GRKGSKLYYSFPW--GKEPIETLWNLGDQELLHTYPGNVSTIQGRDG----RKNVVPCVLS-VSGDVDLG 303 (454)
T ss_dssp EEEC-TT---SCEEEEEEEEETT--EEEEEEEEEEEESHHHHHHSTTCGGGSCEEET----TEEECCEEEE-EEEEHHHH
T ss_pred CCHH-HH---HhcCCCcEEecCC--CceEEEEecCCCHHHHHhccCCceeeEEEECC----CCcEeeEEEe-CcccHHHH
Confidence 6422 22 6899999999995 689999999999999764 49999863 2245588885 46899999
Q ss_pred HHHHHhhccCC-------------CceecCccccccC
Q psy11602 429 ICAILETHQTE-------------TGVRIPDCLRKFV 452 (1083)
Q Consensus 429 i~ailEn~q~~-------------~Gi~iP~~L~py~ 452 (1083)
|+||||++.++ .|+++|..|+|+-
T Consensus 304 i~aile~~~~~~~~~~~~g~d~~r~~l~~P~~lAP~q 340 (454)
T 1g5h_A 304 TLAYLYDSFQLAENSFARKKSLQRKVLKLHPCLAPIK 340 (454)
T ss_dssp HHHHHHHHEEC------------CCEECCCTTTCSCC
T ss_pred HHHHHHHhcchhhcccccCCcccceeEecCcccCCCe
Confidence 99999877553 2589999999963
No 46
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A*
Probab=99.51 E-value=2.2e-14 Score=168.95 Aligned_cols=223 Identities=14% Similarity=0.222 Sum_probs=157.7
Q ss_pred eeEecccccccccccc-cCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeecc-ceE
Q psy11602 195 GVRIPDCLRKFVPAVY-LNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFE-KVE 272 (1083)
Q Consensus 195 Gi~lP~~L~p~~~~~~-~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd-~~~ 272 (1083)
|+.+-.+|..|+.+.+ . ..||.+|..|+++..+..++ .++.+.+.+ .||.+...+ .=+
T Consensus 63 g~~l~~~l~~~~~~~~~~-~~Gy~ev~tP~l~~~~l~~~----------------sGh~~~~~~---emy~~~d~~~~~~ 122 (460)
T 3uh0_A 63 GAKIFNKLIEFMKLQQKF-KFGFNEVVTPLIYKKTLWEK----------------SGHWENYAD---DMFKVETTDEEKE 122 (460)
T ss_dssp HHHHHHHHHHHHHHHHHH-TSCCEECCCCSEEEHHHHHH----------------HTCTTTSGG---GSCEECC------
T ss_pred HHHHHHHHHHHHHHHHHH-hcCCEEEECCeeccHHHHHh----------------cCCcccccc---ceEEEecCCCCCc
Confidence 3444477888887776 5 78999999999999555533 234444444 455554311 001
Q ss_pred EEEe--------eC--CCCCcchhhhh-hhhccccccccccc--CcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHH
Q psy11602 273 QFVL--------TS--PHDDESWKMLD-EMIQNSEEFYADLD--TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQN 339 (1083)
Q Consensus 273 ~~~~--------~~--~~~~~s~~~~~-~~~~~~~~~~~~~~--trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~ 339 (1083)
.+.+ +. -+.-.||++|| ++++...|||+.+. ++||+|+|||+++|++.|+.| +++++++++++..
T Consensus 123 ~l~LrPt~~~~~~~~~~~~~~s~r~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~q~d~~~f~~~--e~~~~e~~~~i~~ 200 (460)
T 3uh0_A 123 EYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTP--SQVKSEIFNSLKL 200 (460)
T ss_dssp CEEECSCSHHHHHHHHTTSCCBGGGCSEEEEECCEEECCCCTTTCBTTTBCSEEEEEEEEEEECG--GGHHHHHHHHHHH
T ss_pred eEEEcccCcHHHHHHHHhccccccccCeEEEEecCeeeCCCCCCCCCceeeeeEEEeeEEEEcCH--HHHHHHHHHHHHH
Confidence 1111 11 12235789999 99999999999766 699999999999999999998 6899999999999
Q ss_pred HHHHH-HHhCCc---------EEEEeccCCC---cch----------------------------hhhc--eeeEEEeeC
Q psy11602 340 SEEFY-ADLGIA---------YRVVNIVSGA---LNH----------------------------AAAK--KLDLEAWFP 376 (1083)
Q Consensus 340 ~e~~~-~~L~lp---------yRvv~~~~~d---l~~----------------------------~a~~--~~DiE~w~P 376 (1083)
+.++| +.|||| |+|.. .+.. +|. +|+. ++|+.+ ..
T Consensus 201 ~~~~~~~~lGl~~~~~~~~~~~~~~l-~t~pe~~~G~~~~w~~ae~~L~~~l~~~g~~~~~~~g~gafygpkid~~~-~d 278 (460)
T 3uh0_A 201 IDIVYNKIFPFVKGGSGAESNYFINF-STRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMV-TD 278 (460)
T ss_dssp HHHHHTTTSCCC-----CCSSCEEEE-ECCCSSCCSCHHHHHHHHHHHHHHHHHHTCCEEEETTCSCSSCCEEEEEE-EC
T ss_pred HHHHHHHHcCCCCcccccccceEEEE-ccCCcccCCCHHHHHHHHHHHHHHHHHhCCCeeECCCccccccceEEEEE-Ec
Confidence 99999 999999 76654 3311 231 1222 456654 36
Q ss_pred CCCcEEeeecccCcccc-cccccceEEecccCCCCcee---eEEeecccccchhHHHHHHHhhccCCCceecCccccccC
Q psy11602 377 GSGAFRELVSCSNCLAY-QSRRLLVRYGQTKKMNEKIE---FVHMLNATACATTRVICAILETHQTETGVRIPDCLRKFV 452 (1083)
Q Consensus 377 ~~~~y~Ev~S~sn~~d~-qarrl~iry~~~~~~~~~~~---~~htln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py~ 452 (1083)
+.|+..+++++ -.|| .+.|+++.|.+. +++.. .+|+- +.| .++|+|++|+|+|. .++|..|+|+-
T Consensus 279 ~~gr~~q~~Ti--qld~~~~~rf~l~y~~~---~g~~~~P~~ih~~-~~G-g~eRli~~Lie~~~----g~~P~~laP~q 347 (460)
T 3uh0_A 279 HLRKTHQVATI--QLDFQLPERFDLKFKDQ---DNSYKRPIMIHRA-TFG-SIERFMALLIDSNE----GRWPFWLNPYQ 347 (460)
T ss_dssp TTSCEEEEEEE--EEESHHHHHTTCCEECT---TSCEECCEEEEEE-EEE-EHHHHHHHHHHHHT----TCCCGGGCSCC
T ss_pred cCCCeeeeccc--ccccccccccceEEECC---CCCccCcEEEecC-cch-HHHHHHHHHHHHcC----CCCCCCCCCce
Confidence 78888888875 3455 688999999876 34444 45543 666 78999999999884 57899899873
No 47
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A*
Probab=99.42 E-value=1.5e-13 Score=161.94 Aligned_cols=226 Identities=13% Similarity=0.184 Sum_probs=155.2
Q ss_pred ccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeeccceEEEEeeCC
Q psy11602 200 DCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKVEQFVLTSP 279 (1083)
Q Consensus 200 ~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd~~~~~~~~~~ 279 (1083)
.+|..++-+.+ ...||.+|..|++...+.-...+ +.+.+.+ .||++..-.. .++.+ .|
T Consensus 71 ~~i~~~ir~~~-~~~G~~ei~tP~l~~~el~~~sg----------------~~d~~~~---em~~~~d~~~-~~~~L-rP 128 (458)
T 2i4l_A 71 KKIEQIVREEQ-NRAGAIELLMPTLQLADLWRESG----------------RYDAYGP---EMLRIADRHK-RELLY-GP 128 (458)
T ss_dssp HHHHHHHHHHH-HHTTCEECBCCSEEEHHHHHHHT----------------HHHHSCT---TSEEEECTTC-CEEEE-CS
T ss_pred HHHHHHHHHHH-HHcCCEEEEcCccCcHHHHHhcC----------------Ccccccc---ceEEEEeCCC-CeEEE-CC
Confidence 45555555555 37899999999999965553222 1222223 3555543211 12221 22
Q ss_pred C-----------CCcchhhhh-hhhccccccccc-ccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHH
Q psy11602 280 H-----------DDESWKMLD-EMIQNSEEFYAD-LDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYAD 346 (1083)
Q Consensus 280 ~-----------~~~s~~~~~-~~~~~~~~~~~~-~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~ 346 (1083)
. .-.||++|| ++++...+||+. +...||+|+|||++++...|..+. +++++.+.+|+..+.++|+.
T Consensus 129 t~ee~t~~i~r~~~~s~~~lP~rl~~ig~~fR~E~~p~~Gl~R~REF~q~d~~~f~~~~-~~ad~e~~~~~~~~~~i~~~ 207 (458)
T 2i4l_A 129 TNEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDE-AGARKSYNKMFVAYLRTFAR 207 (458)
T ss_dssp CCHHHHHHHHHHHCCBGGGCSEEEEEEEEEECCCSSCBTGGGBCSEEEEEEEEEEESSH-HHHHHHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHhhccccCeeeEEecCEeeCCCCCCCCcccccceEEeEEEEEECCH-HHHHHHHHHHHHHHHHHHHH
Confidence 0 123678889 999999999998 667899999999999999998654 67889999999999999999
Q ss_pred hCCcEEEEeccCCCcchhhhcee--------eE---------EEeeCCCCc--------------EEeee-------cc-
Q psy11602 347 LGIAYRVVNIVSGALNHAAAKKL--------DL---------EAWFPGSGA--------------FRELV-------SC- 387 (1083)
Q Consensus 347 L~lpyRvv~~~~~dl~~~a~~~~--------Di---------E~w~P~~~~--------------y~Ev~-------S~- 387 (1083)
|||+|+++...++.+|...+..+ |. +.|...... +..+. .|
T Consensus 208 lGl~~~~~~~~~g~~gg~~s~e~~~l~~~ged~i~~~~~~~~~n~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~g~~~~ 287 (458)
T 2i4l_A 208 MGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDLTPIIKQWTSVYAATEDVHEPARYE 287 (458)
T ss_dssp TTCCEEEEECCCCSSCSSCEEEEEEECTTCSEEEEEEGGGGGCCCCCTTCCTTSCCHHHHHHHHHSCEEETTTCCTTHHH
T ss_pred cCCceEEEEccccccCCccchhhhhhhhcCcceEEecccccccCHHHHhccccHhHHHHHhcCchhhhcChhhccccccc
Confidence 99999999988888776654321 10 111111111 11111 01
Q ss_pred -cCcc-------------cc-----cccccceEEecccCCCCceeeEEeecccccchhHHHHHHHhhccCCCceecCccc
Q psy11602 388 -SNCL-------------AY-----QSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCL 448 (1083)
Q Consensus 388 -sn~~-------------d~-----qarrl~iry~~~~~~~~~~~~~htln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L 448 (1083)
.+|+ .| .|.++++||.+. +|+...+|+ +|+|+.+.|+|+||+|++++++|+.+|..+
T Consensus 288 ~~~~~~~l~~~rgl~~G~iFelg~~~s~~~g~ry~~~---~G~~~p~~~-~gfgiGveRli~al~e~~~d~~g~~~p~~~ 363 (458)
T 2i4l_A 288 SEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTGP---DGTDAPIHG-GSYGVGVSRLLGAIIEACHDDNGIIWPEAV 363 (458)
T ss_dssp HHSCTTTEEEEEEEEEEEEEEEETHHHHHTTCEEECT---TSCEEECEE-EEEEEEHHHHHHHHHHHSEETTEECCCTTT
T ss_pred CCCCCcCceeeeeeccCcEEEecccccccCCcEEECC---CCCEeceEE-eeecccHHHHHHHHHHhhccccCCcCCccc
Confidence 2232 33 488999999754 455666665 699999999999999999999999999999
Q ss_pred cccC
Q psy11602 449 RKFV 452 (1083)
Q Consensus 449 ~py~ 452 (1083)
+||-
T Consensus 364 ap~~ 367 (458)
T 2i4l_A 364 APFR 367 (458)
T ss_dssp CSCS
T ss_pred CCce
Confidence 9973
No 48
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Probab=99.35 E-value=8.6e-13 Score=162.00 Aligned_cols=124 Identities=21% Similarity=0.277 Sum_probs=99.9
Q ss_pred CCCeeEecCChHHHHHHHhcccCC-CCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH----
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLP-EASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES---- 92 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s-~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s---- 92 (1083)
++.++|+|---.++.-.|.+...+ |++||+++|||+++||+|+ +++.||+|+|||+|.|+++|+.|+. ..
T Consensus 237 ~~~~~LRPEtaqg~f~~f~r~~~~~~~~LP~~~aqiG~~fRnEi----sPr~GLlR~REF~q~d~e~F~~p~~-~~~~~y 311 (693)
T 2zt5_A 237 NMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEI----SPRSGLIRVREFTMAEIEHFVDPSE-KDHPKF 311 (693)
T ss_dssp SSEEEECSCSHHHHHTTHHHHHHHTTTCSCEEEEEEEEEECCCS----SCCSGGGSCSEEEEEEEEEEECTTC-CCCTTG
T ss_pred CcceeeccccchHHHHHHHHHHHHhCcCCCEEEEeecceecCCC----CCCCCCccceeeEEccceEEeCcch-hcchhH
Confidence 468999995555677777777765 8999999999999999999 5678999999999999999998874 21
Q ss_pred -------------------------------------HHHHHHHHHHHHHHHHHcCCc---eEEEEeccCCCCcccceeE
Q psy11602 93 -------------------------------------WKMLDEMIQNSEEFYADLGIA---YRVVNIVSGALNHAAAKKL 132 (1083)
Q Consensus 93 -------------------------------------~~~~~~~~~~y~~if~~LgLp---yrvv~~~sgdlg~~as~~~ 132 (1083)
.+++..++..+..||..|||+ ++.......++...+...+
T Consensus 312 ~~v~da~~~~~~~~~~~~~~~~~~~~~~ea~~~g~i~~e~~~~~i~~~~~f~~~lGi~~~~~~~~~~~~~e~a~ya~~~~ 391 (693)
T 2zt5_A 312 QNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCW 391 (693)
T ss_dssp GGTTTCEEEEECHHHHHTTCCCEEEEHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTCCGGGEEEEECCGGGSCTTCSSEE
T ss_pred HHHHHHHHhhhhhhhhccccccccchhhhhhhhcccchHHHHHHHHHHHHHHHHcCcCccEEEEeccCchhhccchhhhh
Confidence 255777888999999999997 5665555667878888899
Q ss_pred eEEEEecCCCceeEEE
Q psy11602 133 DLEAWFPGSGAFRELV 148 (1083)
Q Consensus 133 diE~~~P~~~~~~ev~ 148 (1083)
|+|+.+|. ++.++.
T Consensus 392 d~e~~~~~--g~~e~~ 405 (693)
T 2zt5_A 392 DAESKTSY--GWIEIV 405 (693)
T ss_dssp EEEEEETT--EEEEEE
T ss_pred hehhhccC--ChHHHH
Confidence 99998863 355543
No 49
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Probab=99.33 E-value=9.1e-14 Score=170.40 Aligned_cols=220 Identities=13% Similarity=0.204 Sum_probs=147.6
Q ss_pred ccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeeccceEEEEeeC-
Q psy11602 200 DCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKVEQFVLTS- 278 (1083)
Q Consensus 200 ~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd~~~~~~~~~- 278 (1083)
..|..++-+.+. ..||.+|..|++...+..+..+ +.+.+.+ .||+...-+.-+++.+-.
T Consensus 275 ~~l~~~ir~~~~-~~Gy~eV~tP~l~~~~l~~~sG----------------~~d~~~~---~mf~~~d~~~~~~~~LrP~ 334 (645)
T 1nyr_A 275 REIERYIVDKEV-SMGYDHVYTPVLANVDLYKTSG----------------HWDHYQE---DMFPPMQLDETESMVLRPM 334 (645)
T ss_dssp HHHHHHHHHHHH-HTTEEECBCCSEEETHHHHHHT----------------HHHHCTT---SSCCCEEETTTEEEEECSS
T ss_pred HHHHHHHHHHHH-HcCCEEEECCeeccHHHHhhCC----------------Ccccccc---CcceeEecCCCeEEEeCCC
Confidence 455566655553 7899999999999966553322 2222223 344432211101222111
Q ss_pred ---------CCCCcchhhhh-hhhccccccccccc--CcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHH
Q psy11602 279 ---------PHDDESWKMLD-EMIQNSEEFYADLD--TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYAD 346 (1083)
Q Consensus 279 ---------~~~~~s~~~~~-~~~~~~~~~~~~~~--trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~ 346 (1083)
-+...||++|| ++++...|||+.+. .+||+|+|||++.+...|+.| +++.+.+.+++..+.++|+.
T Consensus 335 ~~~~~~~~~~~~~~syr~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~Q~d~~~f~~~--~~~~d~~~e~i~~~~~~l~~ 412 (645)
T 1nyr_A 335 NCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRP--DQIKEEFKRVVNMIIDVYKD 412 (645)
T ss_dssp SHHHHHHHHHTSCCBGGGCCEEEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEEECG--GGHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhhhhhccCCCeEEEEeccEEecCCCccccCcceeeeEEEccEEEEcCH--HHHHHHHHHHHHHHHHHHHH
Confidence 11235788999 99999999999766 399999999999999999988 56788899999999999999
Q ss_pred hCC-cEEEEeccCCCcchhhhceeeEEEeeCC------------------------------------CCcEEeeecccC
Q psy11602 347 LGI-AYRVVNIVSGALNHAAAKKLDLEAWFPG------------------------------------SGAFRELVSCSN 389 (1083)
Q Consensus 347 L~l-pyRvv~~~~~dl~~~a~~~~DiE~w~P~------------------------------------~~~y~Ev~S~sn 389 (1083)
||| +|++ .+++.+++..+....|.|+|.++ .++.-++++.
T Consensus 413 lGl~~~~~-~l~~~~~~~~e~~~g~~e~~~~~~~~l~~~l~~~g~~~~~~~~~~~~ygpki~~~~~d~lg~~~~~gti-- 489 (645)
T 1nyr_A 413 FGFEDYSF-RLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTA-- 489 (645)
T ss_dssp TTCCCEEE-EEEECCCCCSSSSSCCHHHHHHHHHHHHHHHHHHCCCCCCEESCSBTTBCEEEEEECCTTSCCEEEEEE--
T ss_pred cCCCeEEE-EEeCCCcccchhhcCChHHHHHHHHHHHHHHHHcCCCeEecCCCCceeCCccceehhhhhCchhhcceE--
Confidence 999 7988 56666655444444555555432 1222222211
Q ss_pred ccccc-ccccceEEecccCCCCceeeEEeec-ccccchhHHHHHHHhhccCCCceecCcccccc
Q psy11602 390 CLAYQ-SRRLLVRYGQTKKMNEKIEFVHMLN-ATACATTRVICAILETHQTETGVRIPDCLRKF 451 (1083)
Q Consensus 390 ~~d~q-arrl~iry~~~~~~~~~~~~~htln-~t~~a~~R~i~ailEn~q~~~Gi~iP~~L~py 451 (1083)
-.||+ ++|+++.|.+. +|+...++++. |.+..++|+|++|+|+|+. .+|..|+|+
T Consensus 490 q~D~~l~~~~d~~Y~~~---~g~~~~P~~ih~~~~GgieR~i~~liE~~~~----~~P~~lap~ 546 (645)
T 1nyr_A 490 QLDFLLPERFDLTYIGQ---DGEHHRPVVIHRGVVSTMERFVAFLTEETKG----AFPTWLAPK 546 (645)
T ss_dssp EEESSHHHHTTCCEECT---TSCEECCEEEEEEEEEEHHHHHHHHHHHHTT----CCCTTTCSS
T ss_pred EeecccccccceEEECC---CCCccCcEEEEeccCCcHHHHHHHHHHHhcC----CCCCCCCCc
Confidence 13666 89999999865 34455565544 3333589999999999874 789989886
No 50
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.32 E-value=1.3e-12 Score=125.61 Aligned_cols=101 Identities=24% Similarity=0.530 Sum_probs=83.4
Q ss_pred eeeccccCCCCCCCC-----ceeeccCCCCcccccchhhhHHHHHHhhhhcccceecccccCCCCCccccccCCCCCCCC
Q psy11602 631 LVCCVCLGERSDDVN-----EIVECDSCGVTVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKFSKILVCCVCLGERSDDV 705 (1083)
Q Consensus 631 ~~c~~c~g~~~~~~~-----~l~~C~~Cg~~~h~~~~~~~~~~i~~~~~~~~~W~~~~d~~~~~~~~~C~VC~~~~~~~~ 705 (1083)
.+|.+|+++...|.+ .|+.|++|+.++|+.|+.....++..+..+ .|++.++. .|.||... +++
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~--~W~C~~C~-------~C~~C~~~--~~~ 70 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTY--KWQCIECK-------SCILCGTS--END 70 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHT--TCCCGGGC-------CCTTTTCC--TTT
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCC--ccCccccC-------ccCccccc--CCC
Confidence 369999998766643 599999999999999998776666655666 89998876 89999854 457
Q ss_pred CcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 706 NEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 706 n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
+.||.||.|..+||..|+++.... .|.+.|+|..|..
T Consensus 71 ~~ll~Cd~C~~~yH~~Cl~ppl~~--------~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 71 DQLLFCDDCDRGYHMYCLNPPVAE--------PPEGSWSCHLCWE 107 (114)
T ss_dssp TTEEECSSSCCEEETTTSSSCCSS--------CCSSCCCCHHHHH
T ss_pred CceEEcCCCCccccccccCCCccC--------CCCCCeECccccc
Confidence 899999999999999999975542 2789999999964
No 51
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.25 E-value=7.4e-12 Score=120.05 Aligned_cols=102 Identities=24% Similarity=0.573 Sum_probs=81.5
Q ss_pred eeeccccCCCCCCCC----ceeeccCCCCcccccchhhhHHHHHHhhhhcccceecccccCCCCCccccccCCCCCCCCC
Q psy11602 631 LVCCVCLGERSDDVN----EIVECDSCGVTVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKFSKILVCCVCLGERSDDVN 706 (1083)
Q Consensus 631 ~~c~~c~g~~~~~~~----~l~~C~~Cg~~~h~~~~~~~~~~i~~~~~~~~~W~~~~d~~~~~~~~~C~VC~~~~~~~~n 706 (1083)
.+|.+|++....|++ .|+.|++|+.++|..|+.....+...+..+ .|++.+++ .|.||... ..+++
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~--~W~C~~C~-------~C~vC~~~-~~~~~ 75 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKAL--RWQCIECK-------TCSSCRDQ-GKNAD 75 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTS--CCCCTTTC-------CBTTTCCC-CCTTC
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhcc--ccccccCC-------ccccccCc-CCCcc
Confidence 379999998766544 399999999999999997544444445555 99998887 99999954 23567
Q ss_pred cEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 707 EIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 707 ~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
+||.||.|..+||..|+.+.... .|.+.|+|..|+.
T Consensus 76 ~ll~Cd~C~~~yH~~Cl~p~l~~--------~P~~~W~C~~C~~ 111 (112)
T 3v43_A 76 NMLFCDSCDRGFHMECCDPPLTR--------MPKGMWICQICRP 111 (112)
T ss_dssp CCEECTTTCCEECGGGCSSCCSS--------CCSSCCCCTTTSC
T ss_pred ceEEcCCCCCeeecccCCCCCCC--------CCCCCeECCCCCC
Confidence 99999999999999999876442 2789999999964
No 52
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=99.04 E-value=2.4e-10 Score=132.95 Aligned_cols=96 Identities=14% Similarity=0.125 Sum_probs=80.4
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCC-CCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPE-ASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDE 91 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~-~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~ 91 (1083)
..|+.++.++|+||++.+++.+++++..++ ++||+|+|+++++||+|.... .|+|||++.+.+.|+.+. ..
T Consensus 67 ~~D~~g~~~~Lrp~~t~~~~r~~~~~~~~~~~~lP~r~~~~g~vfR~E~~~~-------gR~reF~q~~~e~~~~~~-~~ 138 (420)
T 1qe0_A 67 FKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQK-------GRYRQFNQFGVEAIGAEN-PS 138 (420)
T ss_dssp ECHHHHCCEEECSCSHHHHHHHHHHTTGGGCSSCSEEEEEEEEEECC--------------CCEEEEEEEEEESCCC-HH
T ss_pred EEcCCCCEEEeCCCChHHHHHHHHhccccccCCCCeEEEEecCEeecCCCcC-------CCcccEEEeeEEEECCCC-ch
Confidence 468889999999999999999999999999 999999999999999995322 499999999999999988 45
Q ss_pred HHHHHHHHHHHHHHHHHHcCCc-eEEEEe
Q psy11602 92 SWKMLDEMIQNSEEFYADLGIA-YRVVNI 119 (1083)
Q Consensus 92 s~~~~~~~~~~y~~if~~LgLp-yrvv~~ 119 (1083)
++ .+++..+.++|++|||+ |+++..
T Consensus 139 ~d---~e~i~~~~~~l~~lgl~~~~i~l~ 164 (420)
T 1qe0_A 139 VD---AEVLAMVMHIYQSFGLKHLKLVIN 164 (420)
T ss_dssp HH---HHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred hH---HHHHHHHHHHHHHcCCCceEEEEc
Confidence 54 77889999999999998 766543
No 53
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.97 E-value=4.6e-10 Score=107.35 Aligned_cols=101 Identities=26% Similarity=0.486 Sum_probs=77.3
Q ss_pred CCceeeccccCCCCCCCCceeeccCCCCcccccchhhhHHHHHHhhhhcccceecccccCCCCCccccccCCCCCCCCCc
Q psy11602 628 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKFSKILVCCVCLGERSDDVNE 707 (1083)
Q Consensus 628 ~~~~~c~~c~g~~~~~~~~l~~C~~Cg~~~h~~~~~~~~~~i~~~~~~~~~W~~~~d~~~~~~~~~C~VC~~~~~~~~n~ 707 (1083)
.+-.+|.+|... .++..|+.|+.|+..+|..|+...... +. ...|++.++. .|.||... .+++.
T Consensus 5 ~~~~~C~~C~~~--g~~~~ll~C~~C~~~~H~~Cl~~~~~~---~~--~~~W~C~~C~-------~C~~C~~~--~~~~~ 68 (111)
T 2ysm_A 5 SSGANCAVCDSP--GDLLDQFFCTTCGQHYHGMCLDIAVTP---LK--RAGWQCPECK-------VCQNCKQS--GEDSK 68 (111)
T ss_dssp CCCSCBTTTCCC--CCTTTSEECSSSCCEECTTTTTCCCCT---TT--STTCCCTTTC-------CCTTTCCC--SCCTT
T ss_pred CCCCCCcCCCCC--CCCcCCeECCCCCCCcChHHhCCcccc---cc--ccCccCCcCC-------cccccCcc--CCCCC
Confidence 344579999654 455678999999999999999543211 12 2489997766 89999954 44679
Q ss_pred EEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 708 IVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 708 iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
||.|+.|+..||..|+.+.... .|.+.|+|..|....
T Consensus 69 ll~Cd~C~~~yH~~Cl~ppl~~--------~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 69 MLVCDTCDKGYHTFCLQPVMKS--------VPTNGWKCKNCRICI 105 (111)
T ss_dssp EEECSSSCCEEEGGGSSSCCSS--------CCSSCCCCHHHHCCS
T ss_pred eeECCCCCcHHhHHhcCCcccc--------CCCCCcCCcCCcCcC
Confidence 9999999999999999976542 277899999997643
No 54
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=98.93 E-value=6.5e-10 Score=134.49 Aligned_cols=171 Identities=12% Similarity=0.230 Sum_probs=130.2
Q ss_pred ecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeeccceEEEEee
Q psy11602 198 IPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKVEQFVLT 277 (1083)
Q Consensus 198 lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd~~~~~~~~ 277 (1083)
+-.+|..++.+.+. ..||.+|..|++...+..+.. ++.+.+.+ .||++..-.. +++.+
T Consensus 49 ~~~~i~~~~~~~~~-~~G~~ei~tP~l~~~~l~~~s----------------G~~~~~~~---~m~~~~d~~~-~~~~L- 106 (572)
T 2j3l_A 49 VLEKLKTIMREEFE-KIDAVEMLMPALLPAELWKES----------------GRYETYGP---NLYRLKDRND-RDYIL- 106 (572)
T ss_dssp HHHHHHHHHHHHHH-TTTCEECBCCSEEETHHHHHH----------------SHHHHSCT---TSCEEECTTC-CEEEE-
T ss_pred HHHHHHHHHHHHHH-HcCCEEEECCccccHHHHHhc----------------CCccccch---heEEEecCCC-CeEEE-
Confidence 33666777766664 789999999999995544322 22233333 4555432211 12222
Q ss_pred CCCC-----------Ccchhhhh-hhhccccccccccc-CcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHH
Q psy11602 278 SPHD-----------DESWKMLD-EMIQNSEEFYADLD-TRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFY 344 (1083)
Q Consensus 278 ~~~~-----------~~s~~~~~-~~~~~~~~~~~~~~-trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~ 344 (1083)
.|.. -.||++|| ++++...|||+.+. .+||+|+|||++++...|+.+. +++++.+.+|+..+.++|
T Consensus 107 rP~~~~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~Gl~R~ReF~q~d~~~f~~~~-~~~~~e~~~~~~~~~~~~ 185 (572)
T 2j3l_A 107 GPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADE-ASLDQSYRDYEKAYSRIF 185 (572)
T ss_dssp CSCCHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCCTGGGSCSEEEEEEEEEEESSH-HHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHhhccChhhcCHhhheecCeeccCcCcccCccccceeEEeeeEEEcCCH-HHHHHHHHHHHHHHHHHH
Confidence 2211 14788899 99999999999877 6899999999999999999964 688999999999999999
Q ss_pred HHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCccccccc
Q psy11602 345 ADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLAYQSR 396 (1083)
Q Consensus 345 ~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qar 396 (1083)
+.|||||+++..++|+||...+ -|.|.|+.....+|.+|+.|+ |.++
T Consensus 186 ~~lgl~~~~~~~~~g~~g~~~s----~E~~~~~~~ge~~~~~~~~~~-~~~~ 232 (572)
T 2j3l_A 186 ERCGLEFRAIIGDGGAMGGKDS----KEFMAISEIGEDTICYSTESD-YAAN 232 (572)
T ss_dssp HHTTCCEEEEECCGGGGTCSSE----EEEEEECTTCSEEEEEESSSS-CEEE
T ss_pred HHcCCcEEEEecccccCCCccc----EEEEEEcCCCcceEEEeCCCC-cccc
Confidence 9999999999999999998754 699999999999999999987 4443
No 55
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A
Probab=98.86 E-value=1.4e-09 Score=128.76 Aligned_cols=223 Identities=13% Similarity=0.171 Sum_probs=140.9
Q ss_pred eeEecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeeccceEEE
Q psy11602 195 GVRIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKVEQF 274 (1083)
Q Consensus 195 Gi~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd~~~~~ 274 (1083)
|+.+-..|..++.+.+. ..||.+|.+|++...+.-.. .++.+.+.+ .||++ .-+. +.+
T Consensus 48 g~~~~~~i~~~~~~~~~-~~G~~ei~tP~l~~~~l~~~----------------sg~~~~~~~---emy~~-d~~~-~~l 105 (471)
T 3a32_A 48 GGPIRYALAEVLAKFHA-RRGYYVVETPIIASTELFKV----------------SGHIEFYRN---NMYLF-DIEG-HEF 105 (471)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTCEECCCCSEEETHHHHH----------------TCCCTTGGG---GSEEE-EETT-EEE
T ss_pred HHHHHHHHHHHHHHHHH-HcCCEEEECCeeeehHHhhh----------------ccCcccccc---ceEEE-ecCC-cEE
Confidence 34444666777666663 78999999999999444422 222223333 45665 1111 122
Q ss_pred EeeCCCC-----------Ccchh---hhh-hhhcccccccccccC--cCceeEEEeeeEEEEEEeCCCchhHHHHHHHHH
Q psy11602 275 VLTSPHD-----------DESWK---MLD-EMIQNSEEFYADLDT--RGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMI 337 (1083)
Q Consensus 275 ~~~~~~~-----------~~s~~---~~~-~~~~~~~~~~~~~~t--rGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~ 337 (1083)
...|.. -.||+ +|| ++++...+||+.+.. +||+|+|||++++...|+.+ +++.+.+.+|+
T Consensus 106 -~LRP~~t~~i~~~~~~~~~s~r~~~~lP~rl~~~g~vfR~E~~~~~~Gl~R~REF~Q~~~e~f~~~--~~~~de~~e~i 182 (471)
T 3a32_A 106 -AVKPMNCPYHILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFTQDDAHIIVPG--GRVIDVVYDVF 182 (471)
T ss_dssp -EECSCSHHHHHHHHHHHHHHHGGGSCSSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEEG--GGHHHHHHHHH
T ss_pred -EEccccHHHHHHHHHhhhhhccccccCCeEEeeccceeccCCCcccccceeEEEEEECCeEEEcCh--HHHHHHHHHHH
Confidence 233321 13566 788 999999999998777 99999999999999999987 57888999999
Q ss_pred HHHHHHHHH-hCC-----cEEEEeccCC-----C-c-chhhh--------------------------------ceeeEE
Q psy11602 338 QNSEEFYAD-LGI-----AYRVVNIVSG-----A-L-NHAAA--------------------------------KKLDLE 372 (1083)
Q Consensus 338 ~~~e~~~~~-L~l-----pyRvv~~~~~-----d-l-~~~a~--------------------------------~~~DiE 372 (1083)
..+.++|+. ||| +|+++.-... + + |..+. ..-.++
T Consensus 183 ~~~~~~l~~~lGl~~~~~~~~l~i~~~~~~~~~e~~~g~~~~~d~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~gp~i~ 262 (471)
T 3a32_A 183 EEMKLVLERLFKLGVSSETFKVRLSMSDKSLIGKEFMGSKEEWEGAEEALREAASRINEKYGIDIVELEGEAAFYGPKLD 262 (471)
T ss_dssp HHHHHHHHHTSCCCCSTTTEEEEEECCCGGGBTTTBCSCHHHHHHHHHHHHHHHHHHHHHHCCEEEEETTCSBTTBCEEE
T ss_pred HHHHHHHHHhhCCCcCCCCeEEEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHhcCCceEecccchhhCCCccc
Confidence 999999999 999 5987643332 1 1 11100 000234
Q ss_pred Eee-C---CCCcEEeeecccCcccc-cccccceEEec--ccCCCCceeeEEeecccccchhHHHHHHHhhccCCCceecC
Q psy11602 373 AWF-P---GSGAFRELVSCSNCLAY-QSRRLLVRYGQ--TKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIP 445 (1083)
Q Consensus 373 ~w~-P---~~~~y~Ev~S~sn~~d~-qarrl~iry~~--~~~~~~~~~~~htln~t~~a~~R~i~ailEn~q~~~Gi~iP 445 (1083)
..+ . +.++..+++. ...|+ .+|+++++|-+ ..+.. ..-++| .+.+=.+.|+|+++||+|. | .+|
T Consensus 263 ~~l~d~~~~l~~~~~~g~--~~lD~~l~r~~d~~Yyt~~~~G~~-e~~~i~--~~i~GgieRli~~lie~~~---g-~~p 333 (471)
T 3a32_A 263 FIMMVEESGVSKEWQMGT--IQFDFNLPRRFRLYDVVREEFGIE-EVYIIH--RALLGSIERFLGVYLEHRR---G-RMP 333 (471)
T ss_dssp EEEEEESSSCEEEEEEEE--EEEESSHHHHTTHHHHHHHHHCCS-CEEEEE--EEEEEEHHHHHHHHHHHTT---T-CCC
T ss_pred eEEeccHHhhhhhheeee--EEecccccccCCceEeccccCCce-eeEEEe--ccccCcHHHHHHHHHHHhC---C-CCC
Confidence 433 2 3345555442 22343 37889988987 32211 111333 1121278999999999875 4 789
Q ss_pred cccccc
Q psy11602 446 DCLRKF 451 (1083)
Q Consensus 446 ~~L~py 451 (1083)
..++|+
T Consensus 334 ~~~ap~ 339 (471)
T 3a32_A 334 FTLAPI 339 (471)
T ss_dssp GGGCSC
T ss_pred CCcCCc
Confidence 888886
No 56
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.84 E-value=1.1e-09 Score=96.24 Aligned_cols=50 Identities=32% Similarity=0.735 Sum_probs=44.6
Q ss_pred ccccccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCC-CcCC
Q psy11602 1031 QAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKK-TKLM 1081 (1083)
Q Consensus 1031 ~~~~~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~-~~~~ 1081 (1083)
.|.+..+ .|.+|++.++...||+||.|+.+||++||+|||+++|++ .|.+
T Consensus 13 ~w~C~~C-~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C 63 (70)
T 3asl_A 13 NRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYC 63 (70)
T ss_dssp TSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCC
T ss_pred CeECCCC-CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCC
Confidence 4455777 899999999999999999999999999999999999999 7543
No 57
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.84 E-value=8e-10 Score=91.01 Aligned_cols=43 Identities=28% Similarity=0.723 Sum_probs=40.1
Q ss_pred ccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1039 KCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1039 ~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
.|.+|++.++.+.||.||.|+.+||++||+|||+.+|++.|.+
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C 44 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQC 44 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEEC
Confidence 4999999999999999999999999999999999999998554
No 58
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=1.5e-09 Score=97.05 Aligned_cols=50 Identities=30% Similarity=0.709 Sum_probs=44.4
Q ss_pred ccccccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCC-CcCC
Q psy11602 1031 QAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKK-TKLM 1081 (1083)
Q Consensus 1031 ~~~~~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~-~~~~ 1081 (1083)
.|.+..+ .|.+|++.++...||+||.|+.+||++||+|||+.+|++ .|.+
T Consensus 21 ~w~C~~c-~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C 71 (77)
T 2e6s_A 21 EKKCHSC-SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYC 71 (77)
T ss_dssp SSCCSSS-SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCC
T ss_pred CeECCCC-CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCC
Confidence 4455667 899999999999999999999999999999999999999 7544
No 59
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.83 E-value=1.5e-09 Score=96.98 Aligned_cols=50 Identities=32% Similarity=0.736 Sum_probs=46.1
Q ss_pred ccccccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCC-cCC
Q psy11602 1031 QAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKT-KLM 1081 (1083)
Q Consensus 1031 ~~~~~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~-~~~ 1081 (1083)
.|.+..+ .|.+|++.++++.||+||.|+++||++||+|||+.+|++. |.+
T Consensus 21 ~W~C~~C-~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C 71 (77)
T 3shb_A 21 NRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYC 71 (77)
T ss_dssp TSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCC
T ss_pred CCCCCCC-cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceEC
Confidence 4566888 8999999999999999999999999999999999999998 665
No 60
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=98.81 E-value=7.1e-09 Score=120.63 Aligned_cols=95 Identities=19% Similarity=0.154 Sum_probs=82.6
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
+.|+.++.++|+|....+++-++..+..++++||+|+|+++++||+|. ++ .| |.|||.+.+.+.|+.+. +.+
T Consensus 68 ~~D~~g~~l~Lrpd~t~~~ar~~~~~~~~~~~lP~rl~~~g~vfR~e~-p~----~g--R~REf~Q~g~e~~g~~~-~~a 139 (421)
T 1h4v_B 68 FQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAER-PQ----KG--RYRQFHQVNYEALGSEN-PIL 139 (421)
T ss_pred EECCCCCEEeeCCcchHHHHHHHHhccccccCCCeEEEEecCeecCCC-CC----CC--CcccEEEccEEEECCCC-hhh
Confidence 569999999999999999999999888899999999999999999994 32 34 99999999999999887 445
Q ss_pred HHHHHHHHHHHHHHHHHcCCc-eEEEE
Q psy11602 93 WKMLDEMIQNSEEFYADLGIA-YRVVN 118 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgLp-yrvv~ 118 (1083)
+ .+++.++.++|++|||+ |+++.
T Consensus 140 d---~e~i~~~~~~l~~lgl~~~~i~i 163 (421)
T 1h4v_B 140 D---AEAVVLLYECLKELGLRRLKVKL 163 (421)
T ss_pred h---HHHHHHHHHHHHHcCCCceEEEE
Confidence 4 47889999999999998 66553
No 61
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=98.79 E-value=6.3e-09 Score=121.69 Aligned_cols=102 Identities=15% Similarity=0.181 Sum_probs=86.8
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
+.|+.++.++|+|+...+++-++..+ .++ +||+|+|+++++||+|. ++ .| |.|||.+.+.+.|+.+. ..+
T Consensus 68 ~~D~~g~~l~LrPd~t~~~aR~~~~~-~~~-~lP~rl~~~g~vfR~er-p~----~g--R~REF~Q~d~ei~g~~~-~~a 137 (434)
T 1wu7_A 68 FVDKGGREVTLIPEATPSTVRMVTSR-KDL-QRPLRWYSFPKVWRYEE-PQ----AG--RYREHYQFNADIFGSDS-PEA 137 (434)
T ss_dssp EECTTSCEEEECSCSHHHHHHHHTTC-TTC-CSSEEEEECCEEECCCC-SC----SS--CCSEEEEEEEEEESCCS-HHH
T ss_pred EECCCCCEEEeCCCChHHHHHHHHhc-CCC-CCCeEEEEEcCeecCCC-CC----CC--CccceEEeeEEEEcCCC-hHh
Confidence 56999999999999999999999887 666 89999999999999994 32 34 99999999999999887 444
Q ss_pred HHHHHHHHHHHHHHHHHcCCc--eEEEEeccCCCCcc
Q psy11602 93 WKMLDEMIQNSEEFYADLGIA--YRVVNIVSGALNHA 127 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgLp--yrvv~~~sgdlg~~ 127 (1083)
+. +++.++.++|++|||+ |+++....|.+++.
T Consensus 138 d~---E~i~~~~~~l~~lgl~~~~~i~l~~~g~~~~~ 171 (434)
T 1wu7_A 138 DA---EVIALASSILDRLGLQDIYEIRINSRKIMEEI 171 (434)
T ss_dssp HH---HHHHHHHHHHHHTTTTTSEEEEEEEHHHHHHH
T ss_pred hH---HHHHHHHHHHHHcCCCCceEEEECChhhHHHH
Confidence 33 6789999999999998 88887777665544
No 62
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.78 E-value=2.1e-09 Score=94.64 Aligned_cols=55 Identities=33% Similarity=0.832 Sum_probs=48.1
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
..++..|.||..+++++.+.||.||+|..+||+.|||+..+ |++.|+|..|....
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~v----------P~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYI----------PEGQWLCRHCLQSR 67 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSC----------CSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcC----------CCCCcCCccCcCcC
Confidence 35677999999888778999999999999999999999765 78999999997643
No 63
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=3e-09 Score=98.32 Aligned_cols=49 Identities=29% Similarity=0.554 Sum_probs=44.3
Q ss_pred ccccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1033 WGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1033 ~~~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
.......|.+|++.+++..||+||.|+.+||++||+|||+.+|++.|.|
T Consensus 12 ~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C 60 (92)
T 2e6r_A 12 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRC 60 (92)
T ss_dssp CCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCC
T ss_pred hccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCC
Confidence 3467778999999999999999999999999999999999999998544
No 64
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=98.73 E-value=2.4e-08 Score=116.30 Aligned_cols=96 Identities=18% Similarity=0.123 Sum_probs=81.6
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
+.|+.++.++|+|....+++-++..+ .++++||+|+|+++++||+|. ++ .| |.|||.+.+.+.|+.+. ..+
T Consensus 69 ~~D~~g~~l~Lrpd~t~~~aR~~~~~-~~~~~~P~rl~~~g~vfR~e~-p~----~g--R~Ref~Q~d~e~~g~~~-~~a 139 (423)
T 1htt_A 69 FEDRNGDSLTLRPEGTAGCVRAGIEH-GLLYNQEQRLWYIGPMFRHER-PQ----KG--RYRQFHQLGCEVFGLQG-PDI 139 (423)
T ss_dssp EECTTSCEEEECSCSHHHHHHHHHHH-TCSTTCCEEEEEEEEEECCCC-CC----SS--CCSEEEEEEEEEESCCS-HHH
T ss_pred EEcCCCCEEEeCCCchHHHHHHHHhc-ccccCCCeEEEEEcCEecCCC-CC----CC--ccceeEEeeEEEECCCC-chh
Confidence 56899999999999999999999865 568899999999999999994 32 34 99999999999999887 445
Q ss_pred HHHHHHHHHHHHHHHHHcCC--ceEEEEec
Q psy11602 93 WKMLDEMIQNSEEFYADLGI--AYRVVNIV 120 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgL--pyrvv~~~ 120 (1083)
+. +++.++.++|++||| .|+++...
T Consensus 140 d~---e~i~~~~~~l~~lgl~~~~~i~i~~ 166 (423)
T 1htt_A 140 DA---ELIMLTARWWRALGISEHVTLELNS 166 (423)
T ss_dssp HH---HHHHHHHHHHHHHTCGGGCEEEEEE
T ss_pred hH---HHHHHHHHHHHHCCCCCCcEEEEcC
Confidence 33 678999999999999 58876544
No 65
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.67 E-value=9.6e-09 Score=98.73 Aligned_cols=51 Identities=27% Similarity=0.572 Sum_probs=46.9
Q ss_pred ccccccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1031 QAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1031 ~~~~~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
.|.+..+..|.+|++.++...||+||.|+.+||++||+|||+.+|++.|++
T Consensus 52 ~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C 102 (114)
T 2kwj_A 52 KWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSC 102 (114)
T ss_dssp TCCCGGGCCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCC
T ss_pred ccCccccCccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeEC
Confidence 466789999999999999999999999999999999999999999998543
No 66
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.66 E-value=5.6e-09 Score=95.74 Aligned_cols=55 Identities=33% Similarity=0.832 Sum_probs=48.3
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
.+++..|.||..+.+.+.+.||.||.|..+||+.||++..+ |++.|+|..|....
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~v----------P~g~W~C~~C~~~~ 76 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYI----------PEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSC----------CSSCCCCHHHHHHT
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCcc----------CCCceECccccCcc
Confidence 46778999999887778899999999999999999999764 78999999998653
No 67
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.62 E-value=8.4e-09 Score=89.49 Aligned_cols=43 Identities=23% Similarity=0.527 Sum_probs=37.4
Q ss_pred cccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
....|.+|++.++ ||.||.|+.+||++||+|||+.+|++.|++
T Consensus 11 ~~~~C~vC~~~~~---ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C 53 (66)
T 2lri_C 11 PGARCGVCGDGTD---VLRCTHCAAAFHWRCHFPAGTSRPGTGLRC 53 (66)
T ss_dssp TTCCCTTTSCCTT---CEECSSSCCEECHHHHCTTTCCCCSSSCCC
T ss_pred CCCCcCCCCCCCe---EEECCCCCCceecccCCCccCcCCCCCEEC
Confidence 3456999987654 999999999999999999999999999654
No 68
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.61 E-value=2e-08 Score=95.95 Aligned_cols=52 Identities=27% Similarity=0.429 Sum_probs=47.4
Q ss_pred cccccccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1030 KQAWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1030 ~~~~~~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
..|.+..+..|.+|++.+++..||+||.|+++||++||+|||+.+|++.|++
T Consensus 47 ~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C 98 (111)
T 2ysm_A 47 AGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKC 98 (111)
T ss_dssp TTCCCTTTCCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCC
T ss_pred cCccCCcCCcccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCC
Confidence 4566799999999999999999999999999999999999999999998543
No 69
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=98.58 E-value=7.5e-08 Score=106.84 Aligned_cols=145 Identities=16% Similarity=0.140 Sum_probs=105.5
Q ss_pred CCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHH
Q psy11602 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKM 95 (1083)
Q Consensus 16 r~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~ 95 (1083)
..+++++|+||....++.+++..+.+ +++|+|+|+++++||+|.. |..|.+||.+++.+.++.+.. ..
T Consensus 120 pl~e~~~LRp~l~p~l~~~~r~~~~~-~~~PlrlfeiG~vFR~E~~-------~~~r~~EF~qle~~i~g~~~~----~~ 187 (288)
T 3dsq_A 120 WLDGKKCLRPMLAPNLYTLWRELERL-WDKPIRIFEIGTCYRKESQ-------GAQHLNEFTMLNLTELGTPLE----ER 187 (288)
T ss_dssp EEETTEEECSCSHHHHHHHHHHHTTT-SCSCEEEEEEEEEECSCCS-------SSCCCSEEEEEEEEEETCCGG----GH
T ss_pred ccccchhhhhcChHHHHHHHHHHHhC-CCCCEEEEEEeeEEecCCC-------CCCcCccEEEEEEEEEcCCch----hh
Confidence 34467999999999888877776555 8999999999999999984 344789999999999987642 35
Q ss_pred HHHHHHHHHHHHHHcCC-ceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhh-hcccceeccCCCccc
Q psy11602 96 LDEMIQNSEEFYADLGI-AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQS-RRLLVRYGQTKQKIY 173 (1083)
Q Consensus 96 ~~~~~~~y~~if~~LgL-pyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs-~rl~i~y~~~~~~~n 173 (1083)
|.++..+++.||++||| +|+.++. +.+..+ +.+|+ +. ++.||+.+. .--... +.++|. . .+.
T Consensus 188 f~elkg~le~ll~~LGl~~~~~~~~-s~e~~~---~~~~l--~~----~~~eig~~G-v~p~vl~~~~gi~---~--~~~ 251 (288)
T 3dsq_A 188 HQRLEDMARWVLEAAGIREFELVTE-SSVVYG---DTVDV--MK----GDLELASGA-MGPHFLDEKWEIF---D--PWV 251 (288)
T ss_dssp HHHHHHHHHHHHHHHTCCCCEEEEC-CCCSSC---CCEEE--EE----TTEEEEEEE-EESCTTTTTTTCC---S--CEE
T ss_pred HHHHHHHHHHHHHHcCCCCcEEecC-CcceEE---EEEEE--Ee----CCEEEEEEE-ecHHHHHHhcCCC---C--CeE
Confidence 89999999999999999 6887664 334332 33444 22 358888876 332223 344441 1 256
Q ss_pred cccccchhheeheec
Q psy11602 174 ATACATTRVICAILE 188 (1083)
Q Consensus 174 ~tg~a~~Rli~Alle 188 (1083)
+.|+++.|++..+..
T Consensus 252 gfglglerl~m~~~g 266 (288)
T 3dsq_A 252 GLGFGLERLLMIREG 266 (288)
T ss_dssp EEEEEHHHHHHHHHT
T ss_pred EEEECHHHHHHHHcC
Confidence 678898998876544
No 70
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.56 E-value=3e-08 Score=83.25 Aligned_cols=44 Identities=41% Similarity=0.819 Sum_probs=38.1
Q ss_pred ccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
.....|.+|++.+ .||.||.|+.+||++||+|||+.+|++.|++
T Consensus 7 ~~~~~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C 50 (56)
T 2yql_A 7 GHEDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWIC 50 (56)
T ss_dssp SSCCSCSSSCCSS---CCEECSSSSCEECSSSSSSCCCSCCCSSCCC
T ss_pred CCCCCCccCCCCC---eEEEcCCCCcceECccCCCCcCCCCCCceEC
Confidence 3456799999865 5999999999999999999999999998543
No 71
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.54 E-value=2.7e-08 Score=105.42 Aligned_cols=49 Identities=33% Similarity=0.746 Sum_probs=39.6
Q ss_pred cccccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCC-CcCC
Q psy11602 1032 AWGVLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKK-TKLM 1081 (1083)
Q Consensus 1032 ~~~~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~-~~~~ 1081 (1083)
|.+..+ .|.+|++.++.+.||+||.|+.+||++||+|||+.+|++ .|.|
T Consensus 170 w~C~~c-~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~C 219 (226)
T 3ask_A 170 RLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYC 219 (226)
T ss_dssp SCCTTT-SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCC
T ss_pred EecCCC-CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCC
Confidence 344556 799999999999999999999999999999999999999 7654
No 72
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.54 E-value=4.1e-08 Score=83.92 Aligned_cols=43 Identities=35% Similarity=0.753 Sum_probs=37.6
Q ss_pred cccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
....|.+|++.+ .||.||.|+.+||++||+|||+.+|++.|.+
T Consensus 8 ~~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C 50 (61)
T 1mm2_A 8 HMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLC 50 (61)
T ss_dssp SCSSCTTTCCCS---SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCC
T ss_pred CCCcCCCCCCCC---CEEEcCCCCHHHcccccCCCcCcCCCCccCC
Confidence 456699998754 5999999999999999999999999998654
No 73
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.54 E-value=4e-08 Score=89.59 Aligned_cols=44 Identities=25% Similarity=0.622 Sum_probs=39.5
Q ss_pred ccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
.....|.+|++.++ ||.||.|+.+||++||+|||+.+|++.|.|
T Consensus 23 ~n~~~C~vC~~~g~---LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C 66 (88)
T 1fp0_A 23 DSATICRVCQKPGD---LVMCNQCEFCFHLDCHLPALQDVPGEEWSC 66 (88)
T ss_dssp SSSSCCSSSCSSSC---CEECTTSSCEECTTSSSTTCCCCCSSSCCC
T ss_pred CCCCcCcCcCCCCC---EEECCCCCCceecccCCCCCCCCcCCCcCC
Confidence 56678999998764 999999999999999999999999999655
No 74
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.53 E-value=3.7e-08 Score=85.47 Aligned_cols=43 Identities=35% Similarity=0.743 Sum_probs=37.6
Q ss_pred cccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
....|.+|++.+ .||.||.|+.+||++||+|||+.+|++.|.+
T Consensus 7 ~~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C 49 (66)
T 1xwh_A 7 NEDECAVCRDGG---ELICCDGCPRAFHLACLSPPLREIPSGTWRC 49 (66)
T ss_dssp CCCSBSSSSCCS---SCEECSSCCCEECTTTSSSCCSSCCSSCCCC
T ss_pred CCCCCccCCCCC---CEEEcCCCChhhcccccCCCcCcCCCCCeEC
Confidence 456799999865 5999999999999999999999999998543
No 75
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=98.52 E-value=1.5e-07 Score=111.12 Aligned_cols=89 Identities=17% Similarity=0.161 Sum_probs=77.4
Q ss_pred CCCCC-CCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchH
Q psy11602 13 PEKDE-LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDE 91 (1083)
Q Consensus 13 ~~dr~-~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~ 91 (1083)
+.|+. ++.++|+|+...+++-++....+++ +||+|+|+++++||+|.... .|.|||++.+...|..+. ..
T Consensus 97 ~~D~~~g~~l~LRPd~t~~~ar~~~~~~~~~-~lP~r~~~~g~vfR~E~~~~-------gR~ReF~Q~d~ei~g~~~-~~ 167 (467)
T 4e51_A 97 FVDALNGENLTLRPENTAAVVRAAIEHNMLY-DGPKRLWYIGPMFRHERPQR-------GRYRQFHQVGVEALGFAG-PD 167 (467)
T ss_dssp EECTTTCCEEEECSCSHHHHHHHHHHTTTTT-TSCEEEEEEEEEECCCCC----------CCSEEEEEEEEEETCCC-SH
T ss_pred EecCCCCCEEEeCcccHHHHHHHHHHccccc-CCCEEEEEEccEEccCCCCC-------CCcCceEEEEEEEEeCCC-hH
Confidence 45888 9999999999999999999988898 69999999999999997433 389999999999998887 34
Q ss_pred HHHHHHHHHHHHHHHHHHcCCc
Q psy11602 92 SWKMLDEMIQNSEEFYADLGIA 113 (1083)
Q Consensus 92 s~~~~~~~~~~y~~if~~LgLp 113 (1083)
++ .+++..+.++|+.|||+
T Consensus 168 ad---aEvi~l~~~~l~~lGl~ 186 (467)
T 4e51_A 168 AD---AEIVMMCQRLWEDLGLT 186 (467)
T ss_dssp HH---HHHHHHHHHHHHHHTCC
T ss_pred HH---HHHHHHHHHHHHHcCCC
Confidence 44 68999999999999995
No 76
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.51 E-value=4.6e-08 Score=93.71 Aligned_cols=51 Identities=31% Similarity=0.671 Sum_probs=45.7
Q ss_pred ccccccccccccccCC-CCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1031 QAWGVLSHKCGLCHLS-HDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1031 ~~~~~~~~~c~~C~~~-~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
.|.+..++.|.+|++. .+++.||.||.|+++||++||+|||+.+|++.|.+
T Consensus 55 ~W~C~~C~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C 106 (112)
T 3v43_A 55 RWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWIC 106 (112)
T ss_dssp CCCCTTTCCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCC
T ss_pred ccccccCCccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeEC
Confidence 5778999999999986 45678999999999999999999999999999654
No 77
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.51 E-value=3.5e-08 Score=85.53 Aligned_cols=59 Identities=34% Similarity=0.632 Sum_probs=47.3
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
.++..|.||...++++.+.||+||.|+.+||+.||++..... ...|.+.|+|..|....
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~-----~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSS-----VIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHH-----HHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCccccc-----ccCCCCCEECCCCcCcc
Confidence 567799999988777789999999999999999999864310 00167899999998654
No 78
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.51 E-value=4.4e-08 Score=83.41 Aligned_cols=42 Identities=43% Similarity=0.899 Sum_probs=36.9
Q ss_pred ccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1037 SHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1037 ~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
...|.+|++.+ .||.||.|+.+||++||+|||+.+|++.|.+
T Consensus 5 ~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C 46 (60)
T 2puy_A 5 EDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWIC 46 (60)
T ss_dssp CSSCTTTCCCS---SCEECSSSSCEECGGGSSSCCSSCCCSCCCC
T ss_pred CCCCcCCCCCC---cEEEcCCCCcCEECCcCCCCcCCCCCCceEC
Confidence 45699999865 5999999999999999999999999998543
No 79
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.47 E-value=5.1e-08 Score=89.38 Aligned_cols=46 Identities=22% Similarity=0.564 Sum_probs=40.0
Q ss_pred cccccccccCCCC--CCcceecCccCCCccccCCCCCCCC----CCCCCcCC
Q psy11602 1036 LSHKCGLCHLSHD--PHTMAKCDTCHLYYHLACLDPPLLR----MPKKTKLM 1081 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~--~~~~~~Cd~C~~~yH~~Cl~Ppl~~----~P~~~~~~ 1081 (1083)
....|.+|++.++ ...||+||.|+.+||++||+|||++ +|++.|+|
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C 66 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYC 66 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeC
Confidence 4567999998865 4789999999999999999999995 99999554
No 80
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.46 E-value=6.2e-08 Score=88.84 Aligned_cols=58 Identities=28% Similarity=0.550 Sum_probs=46.1
Q ss_pred CCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 690 KILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.+..|.||...++.+.|.||+||.|..+||+.||++..... ....|.+.|+|..|...
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~----~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDK----EVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHH----HHHCTTCCCCCHHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCccccc----ccCCCCCCeeCccccch
Confidence 35599999988777789999999999999999999875410 00127899999999764
No 81
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.45 E-value=4.9e-08 Score=83.41 Aligned_cols=44 Identities=30% Similarity=0.664 Sum_probs=38.4
Q ss_pred ccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
.....|.+|++.+ .||.||.|+.+||++||+|||+++|++.|.+
T Consensus 9 ~~~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C 52 (61)
T 2l5u_A 9 DHQDYCEVCQQGG---EIILCDTCPRAYHMVCLDPDMEKAPEGKWSC 52 (61)
T ss_dssp CCCSSCTTTSCCS---SEEECSSSSCEEEHHHHCTTCCSCCCSSCCC
T ss_pred CCCCCCccCCCCC---cEEECCCCChhhhhhccCCCCCCCCCCceEC
Confidence 4566799999854 6999999999999999999999999998554
No 82
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.37 E-value=1e-07 Score=82.49 Aligned_cols=46 Identities=28% Similarity=0.596 Sum_probs=39.2
Q ss_pred cccccccccCC--CCCCcceecCccCCCccccCCCCCCCC--C-CCCCcCC
Q psy11602 1036 LSHKCGLCHLS--HDPHTMAKCDTCHLYYHLACLDPPLLR--M-PKKTKLM 1081 (1083)
Q Consensus 1036 ~~~~c~~C~~~--~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~--~-P~~~~~~ 1081 (1083)
....|.+|+.. .+...||+||.|+.+||++||.|||++ + |++.|++
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C 55 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLC 55 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEEC
Confidence 45679999987 456899999999999999999999998 4 8888543
No 83
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A*
Probab=98.29 E-value=1.2e-06 Score=99.68 Aligned_cols=91 Identities=19% Similarity=0.152 Sum_probs=73.1
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
+.|+.++.++|+|-.-.+++-++... ++++|+|+|+++++||+|... .| |.|||.+++...|..+. ..+
T Consensus 87 ~~D~~g~~l~LRpd~T~~~aR~~~~~---~~~~P~rl~y~g~vfR~e~p~-----~g--R~REF~Q~g~ei~g~~~-~~a 155 (344)
T 1z7m_A 87 FIKHEGQSITLRYDFTLPLVRLYSQI---KDSTSARYSYFGKIFRKEKRH-----KG--RSTENYQIGIELFGESA-DKS 155 (344)
T ss_dssp EECTTCCEEEECCCSHHHHHHHHHTC---CSCCCEEEEEEEECCCCCC--------------CCEEEEEEEESSCH-HHH
T ss_pred EECCCCCEEecCCCCcHHHHHHHHhc---CCCCCeEEEEECcEEccCCCC-----CC--CcceeEEEEEEEEcCCC-cHH
Confidence 46899999999999999999988865 788999999999999999532 23 99999999999999876 444
Q ss_pred HHHHHHHHHHHHHHHHHcCCc-eEEE
Q psy11602 93 WKMLDEMIQNSEEFYADLGIA-YRVV 117 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgLp-yrvv 117 (1083)
+ .+++..+.++|++|||+ |++.
T Consensus 156 D---aEvi~l~~~~l~~lgl~~~~i~ 178 (344)
T 1z7m_A 156 E---LEILSLALQVIEQLGLNKTVFE 178 (344)
T ss_dssp H---HHHHHHHHHHHHHHTCSSEEEE
T ss_pred H---HHHHHHHHHHHHHCCCCcEEEE
Confidence 4 47899999999999997 5544
No 84
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.20 E-value=4.4e-07 Score=79.82 Aligned_cols=45 Identities=24% Similarity=0.566 Sum_probs=39.4
Q ss_pred ccccccccccCCC--CCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1035 VLSHKCGLCHLSH--DPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~--~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
.....|.+|++.+ +++.||+||.|+.+||++||.||+ +|++.|++
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C 60 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLC 60 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCC
Confidence 4567799999876 788999999999999999999995 99998554
No 85
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.16 E-value=5.8e-07 Score=79.82 Aligned_cols=47 Identities=21% Similarity=0.391 Sum_probs=41.4
Q ss_pred ccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
.....|.+|++.++...|+.||.|+.|||+.||.||+..+|.+.|.+
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C 62 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFC 62 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCC
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEC
Confidence 45667999999998889999999999999999999999999877443
No 86
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.15 E-value=9.7e-07 Score=72.50 Aligned_cols=49 Identities=22% Similarity=0.615 Sum_probs=40.1
Q ss_pred cccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 693 ~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.|.||... ++.+.||.||.|...+|..|+.+.... .|.+.|+|..|...
T Consensus 2 ~C~vC~~~--~~~~~ll~Cd~C~~~~H~~Cl~p~l~~--------~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKK--GEDDKLILCDECNKAFHLFCLRPALYE--------VPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCS--SCCSCCEECTTTCCEECHHHHCTTCCS--------CCSSCCSCTTTSCC
T ss_pred CCCCCCCC--CCCCCEEECCCCChhhCcccCCCCcCC--------CCCCcEECcCcccc
Confidence 69999954 357899999999999999999765432 27789999999764
No 87
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Probab=98.10 E-value=5.7e-06 Score=101.84 Aligned_cols=102 Identities=21% Similarity=0.294 Sum_probs=83.0
Q ss_pred hhhhh-hhhccccccccc-ccCcCceeEEEeeeEEEEEEeCCCchh----------------------------------
Q psy11602 285 WKMLD-EMIQNSEEFYAD-LDTRGIFRVHQFEKVEQFVLTSPHDDE---------------------------------- 328 (1083)
Q Consensus 285 ~~~~~-~~~~~~~~~~~~-~~trGl~Rvhqf~kvE~f~~~~~~~~~---------------------------------- 328 (1083)
+++|| ++++...+||+. +--.||+|++||+..|.-+|+.|+...
T Consensus 262 ~~~LP~~~aqiG~~fRnEisPr~GLlR~REF~q~d~e~F~~p~~~~~~~y~~v~da~~~~~~~~~~~~~~~~~~~~~~ea 341 (693)
T 2zt5_A 262 QGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDA 341 (693)
T ss_dssp TTCSCEEEEEEEEEECCCSSCCSGGGSCSEEEEEEEEEEECTTCCCCTTGGGTTTCEEEEECHHHHHTTCCCEEEEHHHH
T ss_pred CcCCCEEEEeecceecCCCCCCCCCccceeeEEccceEEeCcchhcchhHHHHHHHHHhhhhhhhhccccccccchhhhh
Confidence 57888 999999999998 656799999999999999999887531
Q ss_pred ------HHHHHHHHHHHHHHHHHHhCCc---EEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeeccc
Q psy11602 329 ------SWKTLDEMIQNSEEFYADLGIA---YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCS 388 (1083)
Q Consensus 329 ------s~~~~e~~~~~~e~~~~~L~lp---yRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~s 388 (1083)
..+++..++..+.+||..|||+ +|+......++..-|...+|+|+.+|- .|.|+.-|.
T Consensus 342 ~~~g~i~~e~~~~~i~~~~~f~~~lGi~~~~~~~~~~~~~e~a~ya~~~~d~e~~~~~--g~~e~~~~a 408 (693)
T 2zt5_A 342 VEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSY--GWIEIVGCA 408 (693)
T ss_dssp HHHTSSCCHHHHHHHHHHHHHHHHHTCCGGGEEEEECCGGGSCTTCSSEEEEEEEETT--EEEEEEEEE
T ss_pred hhhcccchHHHHHHHHHHHHHHHHcCcCccEEEEeccCchhhccchhhhhhehhhccC--ChHHHHHHH
Confidence 0256778999999999999997 677666567888888899999999863 377765544
No 88
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=98.09 E-value=7.9e-06 Score=93.81 Aligned_cols=100 Identities=12% Similarity=0.031 Sum_probs=74.8
Q ss_pred CCCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchH
Q psy11602 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDE 91 (1083)
Q Consensus 12 ~~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~ 91 (1083)
.+.|+.++.++|+|..-.+++-++..... .+++|+|+|+++++||+|..+.+ ...+.-|.|||++.+...|..++...
T Consensus 84 ~~~D~~g~~l~LRpd~T~~~aR~~~~~~~-~~~~P~r~~y~g~vfR~e~~g~~-~~~~~gR~ReF~Q~g~ei~g~~d~~~ 161 (373)
T 3rac_A 84 RLFDGGGDAVALRPEMTPSIARMAAPRVA-AGRTPIRWCYCERVYRRTDDPAS-LSWASGKAAESTQVGIERIGEEASVD 161 (373)
T ss_dssp BCCCCSSSCEEECSSSHHHHHHHHHHHHH-TTCCCCEEEEEEEEEECC-------------CEEEEEEEEEECSSCCCHH
T ss_pred EEECCCCCEEEECCcCHHHHHHHHHhccc-cCCCCeEEEEEcceEccCCCccc-ccccCCccceeEEeeeEEECCCCCHH
Confidence 35699999999999999999998876543 48899999999999999974100 00023399999999999999883244
Q ss_pred HHHHHHHHHHHHHHHHHHcCCc-eEE
Q psy11602 92 SWKMLDEMIQNSEEFYADLGIA-YRV 116 (1083)
Q Consensus 92 s~~~~~~~~~~y~~if~~LgLp-yrv 116 (1083)
++ .+++....++|+.|||+ |++
T Consensus 162 aD---aEvi~l~~~~l~~lgl~~~~i 184 (373)
T 3rac_A 162 VD---MDVLRLLHEASAAAGVRHHRI 184 (373)
T ss_dssp HH---HHHHHHHHHHHHHHTCCSCEE
T ss_pred HH---HHHHHHHHHHHHHcCCCceEE
Confidence 54 47999999999999994 543
No 89
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=1.1e-06 Score=81.24 Aligned_cols=57 Identities=21% Similarity=0.473 Sum_probs=45.1
Q ss_pred cceecccccCCCCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 678 FWFQLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 678 ~W~~~~d~~~~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.|.+.++. .|.||... .+.+.||.||.|...+|..|++++.... |.+.|+|..|...
T Consensus 10 ~~~~~~~~-------~C~vC~~~--~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~--------P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 10 SAQFIDSY-------ICQVCSRG--DEDDKLLFCDGCDDNYHIFCLLPPLPEI--------PRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCC-------CCSSSCCS--GGGGGCEECTTTCCEECSSSSSSCCSSC--------CSSCCCCHHHHHH
T ss_pred hhhccCCC-------CCccCCCc--CCCCCEEEcCCCCchhccccCCCCcccC--------CCCCcCCccCcCc
Confidence 55554444 99999955 3468999999999999999999765422 7899999999764
No 90
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.04 E-value=6.1e-06 Score=78.13 Aligned_cols=61 Identities=28% Similarity=0.550 Sum_probs=49.9
Q ss_pred CCCCCccccccCCCCCCCCCcEEEcc--cCCcccccccccccccCCCcccCCCCCCCCcccccccCCC----CCCceeec
Q psy11602 687 KFSKILVCCVCLGERSDDVNEIVECD--SCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI----AEPTCELC 760 (1083)
Q Consensus 687 ~~~~~~~C~VC~~~~~~~~n~iv~Cd--~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~----~~~~C~LC 760 (1083)
+..++..|.||.. ..+||.|| .|...+|..|+++..+ |.+.|+|..|.-.. ..+.|.+|
T Consensus 11 ~~~~~~~C~~C~~-----~G~ll~CD~~~Cp~~fH~~Cl~L~~~----------P~g~W~Cp~c~C~~C~k~~~~~C~~C 75 (107)
T 4gne_A 11 KQMHEDYCFQCGD-----GGELVMCDKKDCPKAYHLLCLNLTQP----------PYGKWECPWHQCDECSSAAVSFCEFC 75 (107)
T ss_dssp CCSSCSSCTTTCC-----CSEEEECCSTTCCCEECTGGGTCSSC----------CSSCCCCGGGBCTTTCSBCCEECSSS
T ss_pred cCCCCCCCCcCCC-----CCcEeEECCCCCCcccccccCcCCcC----------CCCCEECCCCCCCcCCCCCCcCcCCC
Confidence 4567779999983 45899999 7999999999996554 78999999887432 45899999
Q ss_pred CC
Q psy11602 761 PN 762 (1083)
Q Consensus 761 p~ 762 (1083)
|.
T Consensus 76 p~ 77 (107)
T 4gne_A 76 PH 77 (107)
T ss_dssp SC
T ss_pred Cc
Confidence 98
No 91
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.03 E-value=1.2e-06 Score=80.23 Aligned_cols=44 Identities=25% Similarity=0.601 Sum_probs=38.8
Q ss_pred cccccccccCCC--CCCcceecCccCCCccccCCCCCCCCCCCCCcCC
Q psy11602 1036 LSHKCGLCHLSH--DPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1036 ~~~~c~~C~~~~--~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
....|.+|++.+ +...||.||.|+.+||++|+.||+ +|++.|+|
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C 69 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLC 69 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCC
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceEC
Confidence 457799999876 778999999999999999999996 99998654
No 92
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=98.02 E-value=1.2e-06 Score=80.15 Aligned_cols=41 Identities=24% Similarity=0.579 Sum_probs=35.2
Q ss_pred ecCccCCcCCCccccCCCCCCCCceeEEeCCCCCCccceeceeec
Q psy11602 841 FEMPYSRWGAKSCALCPDESYARTELALQSPPVNCVPTLLVYMEV 885 (1083)
Q Consensus 841 ~~ip~~r~~~~~C~iC~~~~~~~~GaciqC~~~~C~~~fH~~~~~ 885 (1083)
.+||++||.+ +|+||+++ ..||||||+..+|.+.||+.++.
T Consensus 9 ~NIp~~R~~l-~C~iC~~~---~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 9 MNIPPARWKL-TCYLCKQK---GVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCCCCCCC-CBTTTTBC---CSSCEEECSCTTTCCEEEHHHHH
T ss_pred cCCChHHhcC-CCcCCCCC---CCcEeEecCCCCCCCcCcHHHHH
Confidence 4799999985 89999874 36999999999999999995543
No 93
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.02 E-value=3.1e-06 Score=73.38 Aligned_cols=52 Identities=21% Similarity=0.471 Sum_probs=42.0
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
......|.||.. .+.||.||.|...||.+|+.+..... |.+.|+|..|....
T Consensus 9 ~~~~~~C~vC~~-----~~~ll~Cd~C~~~~H~~Cl~P~l~~~--------P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 9 LAPGARCGVCGD-----GTDVLRCTHCAAAFHWRCHFPAGTSR--------PGTGLRCRSCSGDV 60 (66)
T ss_dssp CCTTCCCTTTSC-----CTTCEECSSSCCEECHHHHCTTTCCC--------CSSSCCCTTTTTCC
T ss_pred CCCCCCcCCCCC-----CCeEEECCCCCCceecccCCCccCcC--------CCCCEECccccCCC
Confidence 445668999973 35699999999999999998765432 78999999998754
No 94
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=97.96 E-value=1.8e-05 Score=91.72 Aligned_cols=89 Identities=16% Similarity=0.153 Sum_probs=74.9
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
+.|+.++.++|+|-.-.+++-++... ..++++|+|+|+++++||+|... .-|.|||.+.+...|..+. ..+
T Consensus 71 f~D~~g~~l~LRpd~T~~~aR~~~~~-~~~~~~P~r~~y~g~vfR~e~~~-------~gR~Ref~Q~g~ei~G~~~-~~a 141 (400)
T 3od1_A 71 LLDQQGNTLVLRPDMTAPIARLVASS-LKDRAYPLRLAYQSNVYRAQQNE-------GGKPAEFEQLGVELIGDGT-ASA 141 (400)
T ss_dssp EECTTSCEEEECSCSHHHHHHHHHHH-CSSSCSCEEEEEEEEEECCCC----------CCCSEEEEEEEEEESCCS-HHH
T ss_pred EECCCCCEEEECCCCHHHHHHHHHhh-cccCCCCeEEEEEcCEEeCCCCC-------CCCCCccEEeEEEEECCCC-hHh
Confidence 45899999999999999999988764 45789999999999999999632 2399999999999999877 445
Q ss_pred HHHHHHHHHHHHHHHHHcCCc
Q psy11602 93 WKMLDEMIQNSEEFYADLGIA 113 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgLp 113 (1083)
+ .+++....++|+.|||+
T Consensus 142 D---aEvi~l~~~~l~~lgl~ 159 (400)
T 3od1_A 142 D---GEVIALMIAALKRAGLS 159 (400)
T ss_dssp H---HHHHHHHHHHHHHTTCC
T ss_pred H---HHHHHHHHHHHHHCCCC
Confidence 4 47999999999999984
No 95
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.93 E-value=9.6e-06 Score=72.43 Aligned_cols=49 Identities=33% Similarity=0.748 Sum_probs=40.6
Q ss_pred cccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCC-CcccccccCC
Q psy11602 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTE-PWFCESCRAG 751 (1083)
Q Consensus 693 ~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~-~W~Cd~C~~~ 751 (1083)
.|.||... ++.+.||.||.|..++|..|++++.... |.+ .|+|..|..+
T Consensus 28 ~C~vC~~~--~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~--------P~g~~W~C~~C~~d 77 (77)
T 2e6s_A 28 SCRVCGGK--HEPNMQLLCDECNVAYHIYCLNPPLDKV--------PEEEYWYCPSCKTD 77 (77)
T ss_dssp SCSSSCCC--CCSTTEEECSSSCCEEETTSSSSCCSSC--------CCSSCCCCTTTCCC
T ss_pred CCcCcCCc--CCCCCEEEcCCCCccccccccCCCccCC--------CCCCCcCCcCccCc
Confidence 79999954 4578999999999999999999765422 677 9999999753
No 96
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=97.92 E-value=2.4e-05 Score=92.15 Aligned_cols=88 Identities=13% Similarity=0.104 Sum_probs=73.7
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s 92 (1083)
..|+.++.++|+|-.-.+++-++.... .+.+||+|+|+++++||+|....| |.|||.+.+...|..+. ..+
T Consensus 91 f~D~~g~~l~LRpd~T~~~aR~~~~~~-~~~~~P~r~~y~g~vfR~e~~~~g-------R~ReF~Q~g~ei~G~~~-~~~ 161 (456)
T 3lc0_A 91 FITKGGHRVALRPEMTPSLARLLLGKG-RSLLLPAKWYSIPQCWRYEAITRG-------RRREHYQWNMDIVGVKS-VSA 161 (456)
T ss_dssp EECSSSCEEEECSCSHHHHHHHHHHSC-TTCCSSEEEEECCEEECCCC------------CCEEEEEEEEEESCCS-THH
T ss_pred EEcCCCCEEecCCcCHHHHHHHHHhcC-cccCCCEEEEEeccEEecCCCCCC-------CccceEEEEEEEEcCCC-hHh
Confidence 468999999999999999999998764 478999999999999999963322 99999999999998877 445
Q ss_pred HHHHHHHHHHHHHHHHHcCC
Q psy11602 93 WKMLDEMIQNSEEFYADLGI 112 (1083)
Q Consensus 93 ~~~~~~~~~~y~~if~~LgL 112 (1083)
+ .+++....++|+.|||
T Consensus 162 D---aEvi~l~~~~l~~lgl 178 (456)
T 3lc0_A 162 E---VELVCAACWAMRSLGL 178 (456)
T ss_dssp H---HHHHHHHHHHHHHTTC
T ss_pred h---HHHHHHHHHHHHHcCC
Confidence 5 3799999999999999
No 97
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=97.91 E-value=5e-06 Score=72.05 Aligned_cols=52 Identities=25% Similarity=0.568 Sum_probs=42.3
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
...+..|.||... +.||.||.|...||..|+++..... |.+.|+|..|....
T Consensus 5 ~~~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~ppl~~~--------P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 5 QKNEDECAVCRDG-----GELICCDGCPRAFHLACLSPPLREI--------PSGTWRCSSCLQAT 56 (66)
T ss_dssp CSCCCSBSSSSCC-----SSCEECSSCCCEECTTTSSSCCSSC--------CSSCCCCHHHHHTC
T ss_pred CCCCCCCccCCCC-----CCEEEcCCCChhhcccccCCCcCcC--------CCCCeECccccCcc
Confidence 3567799999843 5799999999999999999754322 77999999998654
No 98
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=97.89 E-value=6.6e-06 Score=73.44 Aligned_cols=56 Identities=25% Similarity=0.637 Sum_probs=43.5
Q ss_pred cceecccccCCCCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCC-cccccccCC
Q psy11602 678 FWFQLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEP-WFCESCRAG 751 (1083)
Q Consensus 678 ~W~~~~d~~~~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~-W~Cd~C~~~ 751 (1083)
.|++..+ .|.||... ++.++||.||.|..++|.+|+++..... |.+. |+|..|+++
T Consensus 21 ~W~C~~C--------~C~vC~~~--~d~~~ll~CD~C~~~yH~~Cl~PpL~~~--------P~g~~W~C~~C~~d 77 (77)
T 3shb_A 21 NRLCRVC--------ACHLCGGR--QDPDKQLMCDECDMAFHIYCLDPPLSSV--------PSEDEWYCPECRND 77 (77)
T ss_dssp TSCCTTT--------SBTTTCCC--SCGGGEEECTTTCCEEETTTSSSCCSSC--------CSSSCCCCTTTC--
T ss_pred CCCCCCC--------cCCccCCC--CCCcceeEeCCCCCccCcccCCCcccCC--------CCCCceECcCcccc
Confidence 6777443 59999854 4578999999999999999999765422 6777 999999864
No 99
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=97.87 E-value=6.9e-06 Score=70.09 Aligned_cols=51 Identities=24% Similarity=0.618 Sum_probs=41.5
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
.++..|.||.. .+.||.||.|..+||..|+++.... .|.+.|+|..|....
T Consensus 7 ~~~~~C~vC~~-----~g~ll~Cd~C~~~fH~~Cl~ppl~~--------~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 7 HHMEFCRVCKD-----GGELLCCDTCPSSYHIHCLNPPLPE--------IPNGEWLCPRCTCPA 57 (61)
T ss_dssp SSCSSCTTTCC-----CSSCBCCSSSCCCBCSSSSSSCCSS--------CCSSCCCCTTTTTTC
T ss_pred CCCCcCCCCCC-----CCCEEEcCCCCHHHcccccCCCcCc--------CCCCccCChhhcCch
Confidence 45678999984 3589999999999999999975432 278999999998653
No 100
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.86 E-value=7e-06 Score=68.79 Aligned_cols=49 Identities=22% Similarity=0.632 Sum_probs=40.4
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
.++..|.||... +.||.||.|...+|..|+++..... |.+.|+|..|..
T Consensus 7 ~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~ppl~~~--------p~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTI--------PKGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS-----SCCEECSSSSCEECSSSSSSCCCSC--------CCSSCCCHHHHC
T ss_pred CCCCCCccCCCC-----CeEEEcCCCCcceECccCCCCcCCC--------CCCceEChhhhC
Confidence 456799999853 5899999999999999999755422 789999999964
No 101
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.85 E-value=6.9e-06 Score=76.72 Aligned_cols=44 Identities=30% Similarity=0.727 Sum_probs=38.2
Q ss_pred ccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCCCCcC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPKKTKL 1080 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~~~ 1080 (1083)
.+...| +|+...+...|+.||.|+.|||+.|+.||+..+|. .|.
T Consensus 26 ~d~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~ 69 (98)
T 2lv9_A 26 TDVTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYL 69 (98)
T ss_dssp CCBCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBC
T ss_pred CCCEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEE
Confidence 344557 89999999999999999999999999999999996 443
No 102
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=97.84 E-value=9.4e-06 Score=69.25 Aligned_cols=51 Identities=25% Similarity=0.543 Sum_probs=41.9
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
..++..|.||.. .+.||.||.|...+|..|+++.... .|.+.|+|..|...
T Consensus 8 ~~~~~~C~vC~~-----~g~ll~CD~C~~~fH~~Cl~p~l~~--------~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 8 TDHQDYCEVCQQ-----GGEIILCDTCPRAYHMVCLDPDMEK--------APEGKWSCPHCEKE 58 (61)
T ss_dssp SCCCSSCTTTSC-----CSSEEECSSSSCEEEHHHHCTTCCS--------CCCSSCCCTTGGGG
T ss_pred CCCCCCCccCCC-----CCcEEECCCCChhhhhhccCCCCCC--------CCCCceECcccccc
Confidence 356779999985 3589999999999999999986432 27899999999753
No 103
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=97.83 E-value=7.9e-06 Score=69.40 Aligned_cols=48 Identities=23% Similarity=0.647 Sum_probs=39.7
Q ss_pred CCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 690 KILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
.+..|.||... +.||.||.|...+|..|+++.... .|.+.|+|..|..
T Consensus 4 ~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~--------~p~g~W~C~~C~~ 51 (60)
T 2puy_A 4 HEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKT--------IPKGMWICPRCQD 51 (60)
T ss_dssp CCSSCTTTCCC-----SSCEECSSSSCEECGGGSSSCCSS--------CCCSCCCCHHHHH
T ss_pred CCCCCcCCCCC-----CcEEEcCCCCcCEECCcCCCCcCC--------CCCCceEChhccC
Confidence 45699999853 589999999999999999975532 2778999999964
No 104
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.82 E-value=1.1e-05 Score=70.69 Aligned_cols=49 Identities=29% Similarity=0.813 Sum_probs=40.3
Q ss_pred cccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCC-CcccccccCC
Q psy11602 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTE-PWFCESCRAG 751 (1083)
Q Consensus 693 ~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~-~W~Cd~C~~~ 751 (1083)
.|.||... ++.+.||.||.|...+|..|+++..... |.+ .|+|..|...
T Consensus 20 ~C~~C~~~--~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~--------P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGR--QDPDKQLMCDECDMAFHIYCLDPPLSSV--------PSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCC--SCGGGEEECTTTCCEEEGGGSSSCCSSC--------CSSSCCCCTTTSCC
T ss_pred CCcCCCCc--CCCCCEEEcCCCCCceecccCCCCcCCC--------CCCCCcCCcCccCc
Confidence 68999854 4578999999999999999999765422 677 9999999764
No 105
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=97.80 E-value=2e-05 Score=92.64 Aligned_cols=95 Identities=12% Similarity=0.001 Sum_probs=68.3
Q ss_pred CCCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchH
Q psy11602 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDE 91 (1083)
Q Consensus 12 ~~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~ 91 (1083)
+..|++++.++|+|=--.+++-++ .+++.+|+|+|+++++||+|. ++ .|..|.|||.+.+.-.|..+....
T Consensus 74 ~f~D~~g~~l~LRPd~T~~~aR~~----~~~~~~p~k~~y~g~vfR~er-p~----~~~gR~Ref~Q~g~ei~G~~~~~~ 144 (464)
T 4g84_A 74 DLKDQGGELLSLRYDLTVPFARYL----AMNKLTNIKRYHIAKVYRRDN-PA----MTRGRYREFYQCDFDIAGNFDPMI 144 (464)
T ss_dssp BBCCCSSCCEEECSCSHHHHHHHH----HHTTCSCEEEEEEEEEECCCC-----------CCSEEEEEEEEEESCCSTTH
T ss_pred EEECCCCCEEEeCCcCcHHHHHHH----HhcCCCCceeEEEecceeccC-Cc----cccCccceeeecceeccCCccchh
Confidence 478999999999994444554443 356789999999999999994 32 256799999999998887654222
Q ss_pred HHHHHHHHHHHHHHHHHHcCCceEEEE
Q psy11602 92 SWKMLDEMIQNSEEFYADLGIAYRVVN 118 (1083)
Q Consensus 92 s~~~~~~~~~~y~~if~~LgLpyrvv~ 118 (1083)
++ .+++..+.++|+.|||.-..+.
T Consensus 145 aD---aEvi~l~~~~l~~lgl~~~~i~ 168 (464)
T 4g84_A 145 PD---AECLKIMCEILSSLQIGDFLVK 168 (464)
T ss_dssp HH---HHHHHHHHHHHHHHTCCCEEEE
T ss_pred hH---HHHHHHHHHHHHHhCCCCccee
Confidence 33 3688889999999999644443
No 106
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A*
Probab=97.68 E-value=8.3e-05 Score=82.38 Aligned_cols=86 Identities=16% Similarity=0.296 Sum_probs=71.0
Q ss_pred CCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHH
Q psy11602 18 LDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLD 97 (1083)
Q Consensus 18 ~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~ 97 (1083)
++..+|+||..-.++..++. .++...+|+|+|+++++||+|....+ |.+||++++.+.+.... .|.
T Consensus 128 ~~~~~LR~slsp~L~~~l~~-n~~~~~~p~rlfeiG~vFR~E~~~~~-------~~~Ef~ql~~~~~g~~~------~f~ 193 (290)
T 3qtc_A 128 DKNFCLRPMLTPNLYNYLRK-LDRALPDPIKIFEIGPCYRKESDGKE-------HLEEFTMLVFWQMGSGC------TRE 193 (290)
T ss_dssp TTTEEECSCSHHHHHHHHHH-HTTTSCSSEEEEEEEEEECCCSCSSS-------CCSEEEEEEEEEESTTC------CHH
T ss_pred CCCeeEcccChHHHHHHHHH-hhccCCCCeEEEEEcCEEecCCCCCc-------CcchheEEEEEEEcCCh------HHH
Confidence 36889999998888766654 35567899999999999999964322 68999999999987654 367
Q ss_pred HHHHHHHHHHHHcCCceEEE
Q psy11602 98 EMIQNSEEFYADLGIAYRVV 117 (1083)
Q Consensus 98 ~~~~~y~~if~~LgLpyrvv 117 (1083)
++..+.+.||+.|||+|++.
T Consensus 194 elkg~le~ll~~lGl~~~~~ 213 (290)
T 3qtc_A 194 NLESIITDFLNHLGIDFKIV 213 (290)
T ss_dssp HHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHcCCCcEEe
Confidence 89999999999999999876
No 107
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.56 E-value=2.6e-05 Score=69.14 Aligned_cols=53 Identities=28% Similarity=0.710 Sum_probs=42.8
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.+...|.||... +++..||.||.|...+|..|.|+...+. +.+.|+|..|...
T Consensus 16 ~~~~~C~~C~~~--~~~~~mi~CD~C~~wfH~~Cv~~~~~~~--------~~~~w~C~~C~~~ 68 (75)
T 2k16_A 16 NQIWICPGCNKP--DDGSPMIGCDDCDDWYHWPCVGIMAAPP--------EEMQWFCPKCANK 68 (75)
T ss_dssp CEEECBTTTTBC--CSSCCEEECSSSSSEEEHHHHTCSSCCC--------SSSCCCCTTTHHH
T ss_pred CCCcCCCCCCCC--CCCCCEEEcCCCCcccccccCCCCccCC--------CCCCEEChhccCc
Confidence 455689999865 3466899999999999999999976532 4579999999753
No 108
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=97.54 E-value=4.8e-05 Score=69.39 Aligned_cols=50 Identities=24% Similarity=0.583 Sum_probs=40.2
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
..+..|.||..+ +.||.||.|..+||..|+.+.... .|.+.|+|..|...
T Consensus 23 ~n~~~C~vC~~~-----g~LL~CD~C~~~fH~~Cl~PpL~~--------~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 23 DSATICRVCQKP-----GDLVMCNQCEFCFHLDCHLPALQD--------VPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSCCSSSCSS-----SCCEECTTSSCEECTTSSSTTCCC--------CCSSSCCCCSCCCC
T ss_pred CCCCcCcCcCCC-----CCEEECCCCCCceecccCCCCCCC--------CcCCCcCCccccCC
Confidence 456699999943 379999999999999999765432 27899999999754
No 109
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=97.51 E-value=0.0001 Score=88.01 Aligned_cols=95 Identities=15% Similarity=0.078 Sum_probs=68.0
Q ss_pred CCCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchH
Q psy11602 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDE 91 (1083)
Q Consensus 12 ~~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~ 91 (1083)
++.|++++.++|+|=--.+++-++. +++.+|+|+|+++++||+|. +. ..+| |.|||+..+.-.|..+....
T Consensus 127 ~f~D~~g~~l~LRPd~T~~~aR~~~----~~~~~p~k~yyig~vfR~Er-p~--~~~G--R~ReF~Q~g~ei~G~~~~~~ 197 (517)
T 4g85_A 127 DLKDQGGELLSLRYDLTVPFARYLA----MNKLTNIKRYHIAKVYRRDN-PA--MTRG--RYREFYQCDFDIAGNFDPMI 197 (517)
T ss_dssp BBCCTTSCCEEECSCSHHHHHHHHH----HTTCSCEEEEEEEEEECCCC------------CCEEEEEEEEEESCCCTTH
T ss_pred EEECCCCCEEEeCCcCcHHHHHHHH----hCCCCCceeEEEeceEeccC-cc--cccC--ccceeeeeceeccCCccchH
Confidence 4789999999999955455555443 46789999999999999994 21 1123 99999999998887654222
Q ss_pred HHHHHHHHHHHHHHHHHHcCCceEEEE
Q psy11602 92 SWKMLDEMIQNSEEFYADLGIAYRVVN 118 (1083)
Q Consensus 92 s~~~~~~~~~~y~~if~~LgLpyrvv~ 118 (1083)
++ .+++..+.++|+.|||.-..+.
T Consensus 198 aD---aEvi~l~~~~l~~lgl~~~~i~ 221 (517)
T 4g85_A 198 PD---AECLKIMCEILSSLQIGDFLVK 221 (517)
T ss_dssp HH---HHHHHHHHHHHHHHCCCCEEEE
T ss_pred HH---HHHHHHHHHHHHhhcCCccccc
Confidence 33 2688889999999998643333
No 110
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.46 E-value=5.8e-05 Score=80.11 Aligned_cols=49 Identities=29% Similarity=0.813 Sum_probs=36.2
Q ss_pred cccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCC-CcccccccCC
Q psy11602 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTE-PWFCESCRAG 751 (1083)
Q Consensus 693 ~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~-~W~Cd~C~~~ 751 (1083)
.|.+|... ++.+.||.||.|..++|..|.+++.... |.+ .|+|..|...
T Consensus 176 ~C~vC~~~--~~~~~lL~CD~C~~~yH~~CL~PPL~~v--------P~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 176 ACHLCGGR--QDPDKQLMCDECDMAFHIYCLDPPLSSV--------PSEDEWYCPECRND 225 (226)
T ss_dssp SCSSSCCC--CC--CCEECSSSCCEECSCC--CCCCSC--------CSSSCCCCGGGC--
T ss_pred CCcCCCCC--CCCCCeEEcCCCCcceeCccCCCCcccC--------CCCCCCCCcCCcCc
Confidence 69999954 4578999999999999999999765422 677 9999999764
No 111
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.37 E-value=0.00015 Score=67.67 Aligned_cols=50 Identities=26% Similarity=0.696 Sum_probs=38.2
Q ss_pred CCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 690 KILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
+...| ||... .++..||.|+.|...+|..|+|+.... ..+.|+|..|...
T Consensus 27 d~vrC-iC~~~--~~~~~mi~Cd~C~~w~H~~C~~~~~~~---------~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 27 DVTRC-ICGFT--HDDGYMICCDKCSVWQHIDCMGIDRQH---------IPDTYLCERCQPR 76 (98)
T ss_dssp CBCCC-TTSCC--SCSSCEEEBTTTCBEEETTTTTCCTTS---------CCSSBCCTTTSSS
T ss_pred CCEEe-ECCCc--cCCCcEEEcCCCCCcCcCcCCCCCccC---------CCCCEECCCCcCC
Confidence 33455 99854 456799999999999999999986542 2357999999643
No 112
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=97.36 E-value=0.00034 Score=82.54 Aligned_cols=85 Identities=18% Similarity=0.230 Sum_probs=67.6
Q ss_pred CCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHH--HH
Q psy11602 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDES--WK 94 (1083)
Q Consensus 17 ~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s--~~ 94 (1083)
.++.++|+|-.-.+++-++.... .+..+|+|+|+++++||+|....| |.|||.+.+.-.|..+. ..+ +.
T Consensus 92 ~g~~l~LRpd~T~~~aR~~~~~~-~~~~~p~r~~y~g~vfR~e~~~~g-------r~Ref~Q~g~ei~G~~~-~~a~~Da 162 (465)
T 3net_A 92 GSEARALKFDQTVPLAAYIARHL-NDLTFPFARYQMDVVFRGERAKDG-------RFRQFRQCDIDVVGREK-LSLLYDA 162 (465)
T ss_dssp --CCEEECSCSHHHHHHHHHHHG-GGSCSSEEEEECCEEECBC-------------CCEEEEEEEEEECSSC-CCHHHHH
T ss_pred CCCEEEeCCCChHHHHHHHHhcc-cccCCCeEEEEeccEEecCCCCCC-------CcceeEEeeEEEECCCC-ccchhhH
Confidence 47899999999999999988765 467899999999999999974333 89999999999998776 344 32
Q ss_pred HHHHHHHHHHHHHHHcCCc
Q psy11602 95 MLDEMIQNSEEFYADLGIA 113 (1083)
Q Consensus 95 ~~~~~~~~y~~if~~LgLp 113 (1083)
|++....++|+.|||+
T Consensus 163 ---Evi~l~~~~l~~lgl~ 178 (465)
T 3net_A 163 ---QMPAIITEIFEAVNIG 178 (465)
T ss_dssp ---HHHHHHHHHHHHHTCS
T ss_pred ---HHHHHHHHHHHHcCCC
Confidence 7899999999999996
No 113
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=97.33 E-value=7.8e-05 Score=70.59 Aligned_cols=43 Identities=28% Similarity=0.493 Sum_probs=36.6
Q ss_pred ccccccccccCCCCCCcceecC--ccCCCccccCCCCCCCCCCCCCcCCC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCD--TCHLYYHLACLDPPLLRMPKKTKLMG 1082 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd--~C~~~yH~~Cl~Ppl~~~P~~~~~~~ 1082 (1083)
.....|.+|++.+ .|+.|| .|+++||+.||. |+.+|++.|.+-
T Consensus 13 ~~~~~C~~C~~~G---~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp 57 (107)
T 4gne_A 13 MHEDYCFQCGDGG---ELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECP 57 (107)
T ss_dssp SSCSSCTTTCCCS---EEEECCSTTCCCEECTGGGT--CSSCCSSCCCCG
T ss_pred CCCCCCCcCCCCC---cEeEECCCCCCcccccccCc--CCcCCCCCEECC
Confidence 4667799999644 599999 899999999999 999999996553
No 114
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.21 E-value=0.00011 Score=62.55 Aligned_cols=41 Identities=29% Similarity=0.623 Sum_probs=33.4
Q ss_pred cccccccccCCCCCCcceecCccC---CCccccCCCCCCCCCCCCCcC
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCDTCH---LYYHLACLDPPLLRMPKKTKL 1080 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd~C~---~~yH~~Cl~Ppl~~~P~~~~~ 1080 (1083)
+...| +|++.++ ..|+.||.|| .|||+.|+. |+.+|++.|.
T Consensus 9 e~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~ 52 (60)
T 2vnf_A 9 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWF 52 (60)
T ss_dssp CCEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCC
T ss_pred CCCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEE
Confidence 34445 9999875 6799999955 899999999 8999998743
No 115
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.16 E-value=0.00014 Score=61.82 Aligned_cols=48 Identities=27% Similarity=0.776 Sum_probs=37.1
Q ss_pred CCCccccccCCCCCCCCCcEEEccc--CC-cccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDS--CG-VTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~--C~-i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
.+...| ||+... ...||.||+ |. ..+|..|.|+... |.+.|+|..|..
T Consensus 8 ~e~~~C-~C~~~~---~g~mi~CD~cdC~~~wfH~~Cvgl~~~----------p~g~w~C~~C~~ 58 (60)
T 2vnf_A 8 NEPTYC-LCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTK----------PRGKWFCPRCSQ 58 (60)
T ss_dssp -CCEET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSC----------CSSCCCCHHHHC
T ss_pred CCCCEE-ECCCcC---CCCEEEeCCCCCCCceEehhcCCCCcC----------CCCCEECcCccC
Confidence 344566 998653 358999999 55 6899999998765 568999999975
No 116
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=97.14 E-value=9e-05 Score=85.94 Aligned_cols=133 Identities=8% Similarity=0.035 Sum_probs=77.4
Q ss_pred EecccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhccccccccccCceEeeeccceEEEEe
Q psy11602 197 RIPDCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQVGSHGRDTRGIFRVHQFEKVEQFVL 276 (1083)
Q Consensus 197 ~lP~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e~g~h~~dl~~i~Rv~qfd~~~~~~~ 276 (1083)
.+-..|..++.+.+. ..||.+|.+|++...+...... -++.+.+.+ .||++..-.. +.+.
T Consensus 17 ~~~~~i~~~~~~~~~-~~G~~ei~tP~l~~~~l~~~~~--------------g~~~~~~~~---~m~~~~D~~g-~~~~- 76 (420)
T 1qe0_A 17 KKWRYIENQLDELMT-FYNYKEIRTPIFESTDLFARGV--------------GDSTDVVQK---EMYTFKDKGD-RSIT- 76 (420)
T ss_dssp HHHHHHHHHHHHHHH-HHTCEECBCCSEEEHHHHCC----------------------------CCEEECHHHH-CCEE-
T ss_pred HHHHHHHHHHHHHHH-HcCCEEccCcccchHHHhhhcc--------------CCccchhhh---heEEEEcCCC-CEEE-
Confidence 333555666655553 7899999999999855442221 011111122 3444321110 0111
Q ss_pred eCC-----------CCCcch-hhhh-hhhcccccccccccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHH
Q psy11602 277 TSP-----------HDDESW-KMLD-EMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEF 343 (1083)
Q Consensus 277 ~~~-----------~~~~s~-~~~~-~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~ 343 (1083)
..| ....+| +++| ++++...+||+.+... .|+|||.+++...|+.++. .++ .|++..+.++
T Consensus 77 Lrp~~t~~~~r~~~~~~~~~~~~lP~r~~~~g~vfR~E~~~~--gR~reF~q~~~e~~~~~~~-~~d---~e~i~~~~~~ 150 (420)
T 1qe0_A 77 LRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQK--GRYRQFNQFGVEAIGAENP-SVD---AEVLAMVMHI 150 (420)
T ss_dssp ECSCSHHHHHHHHHHTTGGGCSSCSEEEEEEEEEECC---------CCEEEEEEEEEESCCCH-HHH---HHHHHHHHHH
T ss_pred eCCCChHHHHHHHHhccccccCCCCeEEEEecCEeecCCCcC--CCcccEEEeeEEEECCCCc-hhH---HHHHHHHHHH
Confidence 111 112355 6778 8888889999875443 6999999999999988853 332 7899999999
Q ss_pred HHHhCCc-EEEEe
Q psy11602 344 YADLGIA-YRVVN 355 (1083)
Q Consensus 344 ~~~L~lp-yRvv~ 355 (1083)
|+.|||+ |+++.
T Consensus 151 l~~lgl~~~~i~l 163 (420)
T 1qe0_A 151 YQSFGLKHLKLVI 163 (420)
T ss_dssp HHHTTCCCEEEEE
T ss_pred HHHcCCCceEEEE
Confidence 9999998 88764
No 117
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=97.13 E-value=0.00024 Score=73.50 Aligned_cols=51 Identities=25% Similarity=0.552 Sum_probs=41.3
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
+++..|.||..+ +.+|.||.|..++|..|+++.... .|.+.|+|..|....
T Consensus 2 ~~~~~C~~C~~~-----g~ll~Cd~C~~~~H~~C~~p~l~~--------~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 2 PNEDWCAVCQNG-----GELLCCEKCPKVFHLSCHVPTLTN--------FPSGEWICTFCRDLS 52 (184)
T ss_dssp CSCSSCTTTCCC-----SSCEECSSSSCEECTTTSSSCCSS--------CCSSCCCCTTTSCSS
T ss_pred CCCCccccCCCC-----CeeeecCCCCcccCccccCCCCCC--------CCCCCEECccccCcc
Confidence 356789999843 459999999999999999876542 278999999998764
No 118
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.12 E-value=0.00017 Score=61.14 Aligned_cols=49 Identities=24% Similarity=0.687 Sum_probs=37.8
Q ss_pred CCCccccccCCCCCCCCCcEEEccc--CC-cccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDS--CG-VTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~--C~-i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.+...| +|.+.. ...||.||+ |. --+|..|.|+... |.+.|+|..|...
T Consensus 7 ~e~~yC-~C~~~~---~g~mi~CD~~~C~~~wfH~~Cvgl~~~----------p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 7 NEPTYC-LCHQVS---YGEMIGCDNPDCPIEWFHFACVDLTTK----------PKGKWFCPRCVQE 58 (59)
T ss_dssp -CCEET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSC----------CSSCCCCHHHHCC
T ss_pred CCCcEE-ECCCCC---CCCeeEeeCCCCCCCCEecccCCcccC----------CCCCEECcCccCc
Confidence 345566 998653 357999999 77 5999999998765 5689999999753
No 119
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.10 E-value=0.00038 Score=61.13 Aligned_cols=50 Identities=26% Similarity=0.722 Sum_probs=39.3
Q ss_pred CCCccccccCCCCCCCCCcEEEccc--CC-cccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDS--CG-VTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~--C~-i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
.+...| ||..... ..||.||+ |. .-+|..|.|+... |.+.|+|..|....
T Consensus 14 ~~~~~C-~C~~~~~---g~MI~CD~~~C~~~wfH~~Cvgl~~~----------p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 14 NEPTYC-LCHQVSY---GEMIGCDNPDCSIEWFHFACVGLTTK----------PRGKWFCPRCSQES 66 (71)
T ss_dssp TSCCCS-TTCCCSC---SSEECCSCSSCSCCCEETTTTTCSSC----------CSSCCCCTTTSSCS
T ss_pred CCCCEE-ECCCCCC---CCEeEeeCCCCCCccEecccCCcCcC----------CCCCEECCCCCccc
Confidence 455567 9986532 57999999 77 5899999998765 56899999998654
No 120
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.10 E-value=0.00031 Score=74.15 Aligned_cols=52 Identities=21% Similarity=0.489 Sum_probs=42.0
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGIA 753 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~~ 753 (1083)
+.+..|.||..+ ..+|.||.|..++|..|+++.... .|.|.|+|..|.....
T Consensus 5 ~~~~~C~~C~~~-----g~ll~Cd~C~~~~H~~Cl~p~l~~--------~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 5 PNEDWCAVCQNG-----GDLLCCEKCPKVFHLTCHVPTLLS--------FPSGDWICTFCRDIGK 56 (207)
T ss_dssp SSCSSBTTTCCC-----EEEEECSSSSCEECTTTSSSCCSS--------CCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCCC-----CceEEcCCCCCccCCccCCCCCCC--------CCCCCEEeCceeCccc
Confidence 456689999843 369999999999999999876542 2789999999998653
No 121
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.04 E-value=0.00027 Score=64.82 Aligned_cols=48 Identities=25% Similarity=0.749 Sum_probs=37.9
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCC---cccccccccccccCCCcccCCCCCCCCccccc-ccC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCG---VTVHEGCYGVQDTASISSTVSSCSTEPWFCES-CRA 750 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~---i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~-C~~ 750 (1083)
++...| ||..... ..||.||+|+ .-+|..|.|+... |.+.|+|.. |..
T Consensus 24 ~~~~yC-iC~~~~~---g~MI~CD~c~C~~eWfH~~CVgl~~~----------p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 24 QEEVYC-FCRNVSY---GPMVACDNPACPFEWFHYGCVGLKQA----------PKGKWYCSKDCKE 75 (90)
T ss_dssp CCSCCS-TTTCCCS---SSEECCCSSSCSCSCEETTTSSCSSC----------TTSCCCSSHHHHH
T ss_pred CCCcEE-EeCCCCC---CCEEEecCCCCccccCcCccCCCCcC----------CCCCccCChhhcc
Confidence 455567 9996533 3699999977 7899999998765 568999999 863
No 122
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.02 E-value=0.0004 Score=60.99 Aligned_cols=41 Identities=32% Similarity=0.737 Sum_probs=33.7
Q ss_pred cccccccccCCCCCCcceecCc--cC-CCccccCCCCCCCCCCCCCcC
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCDT--CH-LYYHLACLDPPLLRMPKKTKL 1080 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd~--C~-~~yH~~Cl~Ppl~~~P~~~~~ 1080 (1083)
+...| +|++..+ ..|+.||. |. .|||+.|+. |+.+|++.|.
T Consensus 15 ~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~ 58 (71)
T 1wen_A 15 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWF 58 (71)
T ss_dssp SCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCC
T ss_pred CCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEE
Confidence 45556 8999876 57999999 66 799999999 8999988744
No 123
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=96.94 E-value=0.00027 Score=60.40 Aligned_cols=40 Identities=28% Similarity=0.573 Sum_probs=32.3
Q ss_pred cccccccccCCCCCCcceecCccC---CCccccCCCCCCCCCCCCCc
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCDTCH---LYYHLACLDPPLLRMPKKTK 1079 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd~C~---~~yH~~Cl~Ppl~~~P~~~~ 1079 (1083)
+...| +|++.++ ..|+.||.|+ .|||+.|+. |+..|++.|
T Consensus 10 e~~yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w 52 (62)
T 2g6q_A 10 EPTYC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKW 52 (62)
T ss_dssp CCEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCC
T ss_pred CCcEE-ECCCCCC-CCeeeeeCCCCCcccEecccCC--cCcCCCCCE
Confidence 34455 9999765 5799999966 999999999 678888774
No 124
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=96.91 E-value=0.00034 Score=59.78 Aligned_cols=49 Identities=22% Similarity=0.613 Sum_probs=37.8
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCC---cccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCG---VTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~---i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.+...| +|.+.. ...||.||+|+ .-+|..|.|+... |.+.|+|..|...
T Consensus 9 ~e~~yC-~C~~~~---~g~MI~CD~c~C~~~WfH~~Cvgl~~~----------p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 9 NEPTYC-LCNQVS---YGEMIGCDNEQCPIEWFHFSCVSLTYK----------PKGKWYCPKCRGD 60 (62)
T ss_dssp -CCEET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSC----------CSSCCCCHHHHTC
T ss_pred CCCcEE-ECCCCC---CCCeeeeeCCCCCcccEecccCCcCcC----------CCCCEECcCcccC
Confidence 445566 998653 24799999955 7999999998765 5689999999764
No 125
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=96.90 E-value=0.00054 Score=62.82 Aligned_cols=42 Identities=24% Similarity=0.485 Sum_probs=34.2
Q ss_pred ccccccccccCCCCCCcceecCccC---CCccccCCCCCCCCCCCCCcC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCDTCH---LYYHLACLDPPLLRMPKKTKL 1080 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd~C~---~~yH~~Cl~Ppl~~~P~~~~~ 1080 (1083)
.+...| +|++.++. .|+.||.|+ .|||+.|+. |+..|++.|.
T Consensus 24 ~~~~yC-iC~~~~~g-~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~ 68 (90)
T 2jmi_A 24 QEEVYC-FCRNVSYG-PMVACDNPACPFEWFHYGCVG--LKQAPKGKWY 68 (90)
T ss_dssp CCSCCS-TTTCCCSS-SEECCCSSSCSCSCEETTTSS--CSSCTTSCCC
T ss_pred CCCcEE-EeCCCCCC-CEEEecCCCCccccCcCccCC--CCcCCCCCcc
Confidence 345556 99987664 699999988 999999998 8889988744
No 126
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=96.85 E-value=0.00037 Score=58.99 Aligned_cols=40 Identities=38% Similarity=0.773 Sum_probs=32.7
Q ss_pred cccccccccCCCCCCcceecCc--cC-CCccccCCCCCCCCCCCCCc
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCDT--CH-LYYHLACLDPPLLRMPKKTK 1079 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd~--C~-~~yH~~Cl~Ppl~~~P~~~~ 1079 (1083)
+...| +|++.++ ..|+.||. |. .|||+.|+. |+..|++.|
T Consensus 8 e~~yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w 50 (59)
T 3c6w_A 8 EPTYC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKW 50 (59)
T ss_dssp CCEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCC
T ss_pred CCcEE-ECCCCCC-CCeeEeeCCCCCCCCEecccCC--cccCCCCCE
Confidence 34445 9999765 57999999 65 799999999 899999874
No 127
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.78 E-value=0.00079 Score=58.58 Aligned_cols=41 Identities=24% Similarity=0.599 Sum_probs=34.8
Q ss_pred ccccccccccCCCCCCcceecCccCCCccccCCCCCCCCCCC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMPK 1076 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~ 1076 (1083)
.....| +|++..+...|+.||.|+.|||+.|+..+...+|.
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~ 57 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPE 57 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCS
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCC
Confidence 455556 99999888889999999999999999988776663
No 128
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=96.77 E-value=0.00054 Score=71.34 Aligned_cols=49 Identities=24% Similarity=0.573 Sum_probs=39.1
Q ss_pred CccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 691 ILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 691 ~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
+..|.||..+ +.++.||.|..++|..|..+.... .|.|.|+|..|....
T Consensus 2 ~~~C~~C~~~-----g~ll~Cd~C~~~~H~~Cl~p~l~~--------~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKP-----GDLVMCNQCEFCFHLDCHLPALQD--------VPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCC-----SSCCCCTTTCCBCCSTTSTTCCSS--------CCCTTCCTTTTSCSC
T ss_pred CCcCccCCCC-----CceeECCCCCchhccccCCCCccc--------CCCCCCCCcCccCCC
Confidence 4589999843 369999999999999999765432 278999999998653
No 129
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.75 E-value=0.00093 Score=61.38 Aligned_cols=42 Identities=31% Similarity=0.712 Sum_probs=33.8
Q ss_pred cccccccccCCCCCCcceecCc--cC-CCccccCCCCCCCCCCCCCcCC
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCDT--CH-LYYHLACLDPPLLRMPKKTKLM 1081 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd~--C~-~~yH~~Cl~Ppl~~~P~~~~~~ 1081 (1083)
+...| +|++..+ ..|+.||. |. .|||+.|+. |+..|++.|.|
T Consensus 35 e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~C 79 (91)
T 1weu_A 35 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFC 79 (91)
T ss_dssp CCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCC
T ss_pred CCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEEC
Confidence 44556 9999876 57999999 55 899999999 88899887443
No 130
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.73 E-value=0.00089 Score=61.52 Aligned_cols=50 Identities=26% Similarity=0.727 Sum_probs=39.0
Q ss_pred CCCccccccCCCCCCCCCcEEEccc--CC-cccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDS--CG-VTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~--C~-i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
.+...| ||.... ...||.||+ |. .-+|..|.|+... |.+.|+|..|....
T Consensus 34 ~e~~yC-iC~~~~---~g~MI~CD~~dC~~~WfH~~CVgl~~~----------p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 34 NEPTYC-LCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTK----------PRGKWFCPRCSQES 86 (91)
T ss_dssp CCCBCS-TTCCBC---CSCCCCCSCSSCSCCCCCSTTTTCSSC----------CCSSCCCTTTCCCC
T ss_pred CCCcEE-ECCCCC---CCCEeEecCCCCCCCCEecccCCcCcC----------CCCCEECcCccCcC
Confidence 455566 999653 257999999 66 5799999998765 56899999998654
No 131
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.57 E-value=0.0017 Score=56.56 Aligned_cols=51 Identities=22% Similarity=0.685 Sum_probs=40.1
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.+...| ||... +++..||.||.|..=+|..|.|+...+ ..+.|+|..|...
T Consensus 17 ~~~~~C-iC~~~--~~~~~MIqCd~C~~WfH~~Cvgi~~~~---------~~~~~~C~~C~~s 67 (68)
T 3o70_A 17 QGLVTC-FCMKP--FAGRPMIECNECHTWIHLSCAKIRKSN---------VPEVFVCQKCRDS 67 (68)
T ss_dssp TTCCCS-TTCCC--CTTCCEEECTTTCCEEETTTTTCCTTS---------CCSSCCCHHHHTC
T ss_pred CCceEe-ECCCc--CCCCCEEECCCCCccccccccCcCccc---------CCCcEECCCCCCC
Confidence 445577 99864 346789999999999999999997642 2368999999754
No 132
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=96.49 E-value=0.001 Score=60.62 Aligned_cols=63 Identities=27% Similarity=0.460 Sum_probs=44.0
Q ss_pred cccccccccccCCCCCcceeecccccccccccCCCccceeeecccccccccccccccccccCCC------CCCccccccc
Q psy11602 545 QPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEVDQAD------PFYAHCRLHA 618 (1083)
Q Consensus 545 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~c~~~~H~~ca~~~g~~~e~~~~~~~~~~------p~~~~c~~h~ 618 (1083)
+..|.+|+.+ ..|..| +|..+.|...||++||..+|++.+....+....+ .+.++|+.|.
T Consensus 17 ~l~C~iC~~~---~~GAci-----------qC~~~~C~~~fHv~CA~~aGl~~~~~~~~~~~~~~~~~~v~~~~yC~~Hs 82 (87)
T 2lq6_A 17 KLTCYLCKQK---GVGASI-----------QCHKANCYTAFHVTCAQKAGLYMKMEPVKELTGGGTTFSVRKTAYCDVHT 82 (87)
T ss_dssp CCCBTTTTBC---CSSCEE-----------ECSCTTTCCEEEHHHHHHHTCCEEEEEEEECTTTSCEEEEEEEECCGGGS
T ss_pred cCCCcCCCCC---CCcEeE-----------ecCCCCCCCcCcHHHHHHCCCceEeecccccccCCccccceECeECcCCC
Confidence 4489999842 258887 9999999999999999999976543322111111 3556899887
Q ss_pred ccc
Q psy11602 619 DKL 621 (1083)
Q Consensus 619 ~k~ 621 (1083)
-++
T Consensus 83 Ppg 85 (87)
T 2lq6_A 83 PPG 85 (87)
T ss_dssp SSS
T ss_pred CcC
Confidence 544
No 133
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C*
Probab=96.45 E-value=0.0057 Score=67.14 Aligned_cols=84 Identities=5% Similarity=-0.149 Sum_probs=68.6
Q ss_pred CCCCCCCCCeeEecCChHHHHHHHhcccCCCCC-CCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCch
Q psy11602 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEAS-LPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDD 90 (1083)
Q Consensus 12 ~~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~-LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e 90 (1083)
...|+.++.++|+|=--.+++ .. -..+++ +|+|+|.++++||+|... - |||+..+.-.|..+. .
T Consensus 39 ~f~d~~g~~l~LRpd~T~~~a---~~-~~~~~~~~p~R~~y~g~vfR~e~~~-------~---Ref~Q~g~ei~g~~~-~ 103 (275)
T 1usy_A 39 FFLDRKGNLFSIREDFTKTVL---NH-RKRYSPDSQIKVWYADFVYRYSGSD-------L---VAEYQLGLEKVPRNS-L 103 (275)
T ss_dssp CEEETTSCEEEECCCHHHHHH---HH-HTTCTTCCCEEEECCEEEEEEETTE-------E---EEEEEEEEEEESCCS-H
T ss_pred ccCCCCCCEEEeCCcChHHHH---HH-HhhcCCCCceEEEEeceEEecCCCC-------C---CeeeEeCEEEecCCC-c
Confidence 456888999999998888888 22 234677 999999999999999731 1 999999999998877 3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCc
Q psy11602 91 ESWKMLDEMIQNSEEFYADLGIA 113 (1083)
Q Consensus 91 ~s~~~~~~~~~~y~~if~~LgLp 113 (1083)
.++ .+++....++|+.|||.
T Consensus 104 ~~D---aEvi~l~~~~l~~lgl~ 123 (275)
T 1usy_A 104 DDS---LEVLEIIVESASEFFEG 123 (275)
T ss_dssp HHH---HHHHHHHHHHHHHHCCS
T ss_pred hhH---HHHHHHHHHHHHHcCCC
Confidence 443 78999999999999985
No 134
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.37 E-value=0.0027 Score=55.10 Aligned_cols=55 Identities=24% Similarity=0.583 Sum_probs=38.3
Q ss_pred CCCccccccCCCCCCCCCcEEEccc--CCcccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDS--CGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~--C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
++...| ||+.. .+...||.|++ |..=+|..|+|+...+.. .....+.|+|..|+.
T Consensus 8 e~~v~C-~C~~~--~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~----~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 8 EAKVRC-ICSST--MVNDSMIQCEDQRCQVWQHLNCVLIPDKPGE----SAEVPPVFYCELCRL 64 (68)
T ss_dssp SCEECC-TTCCC--SCCSCEEECSCTTTCEEEETTTSCCCSSTTS----CCCCCSSCCCHHHHH
T ss_pred CCCEEe-ECCCC--cCCCCEEEECCCCCCCeEchhhCCCCccccc----ccCCCCcEECcCccC
Confidence 334455 99854 34568999995 999999999999764321 111235799999974
No 135
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.32 E-value=0.003 Score=53.98 Aligned_cols=56 Identities=18% Similarity=0.357 Sum_probs=42.9
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
++...|.+|..... ++..||.||.|..=+|..|.|+...+.. ..+.|+|..|....
T Consensus 4 ~e~~~C~~C~~~~~-~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~-------~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 4 GSSGQCGACGESYA-ADEFWICCDLCEMWFHGKCVKITPARAE-------HIKQYKCPSCSNKS 59 (64)
T ss_dssp SSCCCCSSSCCCCC-SSSCEEECSSSCCEEETTTTTCCTTGGG-------GCSSCCCHHHHTTT
T ss_pred CCCCCCCCCCCccC-CCCCEEEccCCCCCCCccccCcChhHhc-------CCCcEECCCCcCcC
Confidence 56678999987543 3578999999999999999999754210 13689999997643
No 136
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.28 E-value=0.0017 Score=53.41 Aligned_cols=36 Identities=25% Similarity=0.633 Sum_probs=31.7
Q ss_pred cccccCCCCCCcceecCccCCCccccCCCCCCCCCC
Q psy11602 1040 CGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLRMP 1075 (1083)
Q Consensus 1040 c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P 1075 (1083)
-++|++..+...|+.||.|+.|||..|+..+...+|
T Consensus 6 ~C~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~ 41 (52)
T 3o7a_A 6 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP 41 (52)
T ss_dssp CSTTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC
T ss_pred EEEeCCcCCCCCEEEcCCCCccccccccCCCcccCC
Confidence 468999988889999999999999999998776665
No 137
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.19 E-value=0.0028 Score=55.63 Aligned_cols=53 Identities=25% Similarity=0.604 Sum_probs=39.8
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.+...| ||..... ++..||.||.|..=+|..|.|+..... ....|+|..|...
T Consensus 14 ~~~~~C-~C~~~~~-~g~~mI~Cd~C~~W~H~~Cvg~~~~~~--------~~~~~~C~~C~~~ 66 (72)
T 1wee_A 14 NWKVDC-KCGTKDD-DGERMLACDGCGVWHHTRCIGINNADA--------LPSKFLCFRCIEL 66 (72)
T ss_dssp SSEECC-TTCCCSC-CSSCEEECSSSCEEEETTTTTCCTTSC--------CCSCCCCHHHHHH
T ss_pred CcceEe-eCCCccC-CCCcEEECCCCCCccCCeeeccCcccc--------CCCcEECCCccCC
Confidence 345578 8986532 345799999999999999999975422 3478999999753
No 138
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.08 E-value=0.0029 Score=54.13 Aligned_cols=38 Identities=29% Similarity=0.610 Sum_probs=31.8
Q ss_pred cccccccccCCCC-CCcceecCccCCCccccCCCCCCCC
Q psy11602 1036 LSHKCGLCHLSHD-PHTMAKCDTCHLYYHLACLDPPLLR 1073 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~-~~~~~~Cd~C~~~yH~~Cl~Ppl~~ 1073 (1083)
+...|.+|++..+ ...|+.||.|+.|||..|+.-+...
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~ 43 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPAR 43 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTG
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhH
Confidence 4566889999875 5789999999999999999876544
No 139
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=96.08 E-value=0.00069 Score=67.17 Aligned_cols=43 Identities=21% Similarity=0.446 Sum_probs=36.4
Q ss_pred cccccccccCCCCCCcceecCccCCCccccCCCCCCCC-------CCCCCcCC
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPLLR-------MPKKTKLM 1081 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl~~-------~P~~~~~~ 1081 (1083)
....|.+|+..++ |+.||+|...||+.||+|||.. .|.+.|.+
T Consensus 62 ~~d~C~vC~~GG~---LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C 111 (142)
T 2lbm_A 62 MDEQCRWCAEGGN---LICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYC 111 (142)
T ss_dssp CBCSCSSSCCCSS---EEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCC
T ss_pred CCCeecccCCCCc---EEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEe
Confidence 3456999999887 9999999999999999999973 58888543
No 140
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.02 E-value=0.0021 Score=56.22 Aligned_cols=47 Identities=30% Similarity=0.749 Sum_probs=36.8
Q ss_pred CCccccccCCCCCCCCCcEEEcccCC---cccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 690 KILVCCVCLGERSDDVNEIVECDSCG---VTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~~~n~iv~Cd~C~---i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
+...| +|.... ...||.||+|+ .-+|..|.|+... |.+.|+|..|..
T Consensus 5 ~~~yC-~C~~~~---~g~MI~CD~cdC~~~WfH~~Cvgl~~~----------p~~~w~Cp~C~~ 54 (70)
T 1x4i_A 5 SSGYC-ICNQVS---YGEMVGCDNQDCPIEWFHYGCVGLTEA----------PKGKWYCPQCTA 54 (70)
T ss_dssp CCCCS-TTSCCC---CSSEECCSCTTCSCCCEEHHHHTCSSC----------CSSCCCCHHHHH
T ss_pred CCeEE-EcCCCC---CCCEeEeCCCCCCccCCcccccccCcC----------CCCCEECCCCCc
Confidence 34455 798653 34899999986 7899999998765 568999999964
No 141
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.99 E-value=0.0026 Score=55.69 Aligned_cols=38 Identities=24% Similarity=0.516 Sum_probs=30.6
Q ss_pred cccccCCCCCCcceecCccC---CCccccCCCCCCCCCCCCCcC
Q psy11602 1040 CGLCHLSHDPHTMAKCDTCH---LYYHLACLDPPLLRMPKKTKL 1080 (1083)
Q Consensus 1040 c~~C~~~~~~~~~~~Cd~C~---~~yH~~Cl~Ppl~~~P~~~~~ 1080 (1083)
.++|++.++. .|+.||.|| .|||+.|+. |+..|++.|.
T Consensus 8 yC~C~~~~~g-~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~ 48 (70)
T 1x4i_A 8 YCICNQVSYG-EMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWY 48 (70)
T ss_dssp CSTTSCCCCS-SEECCSCTTCSCCCEEHHHHT--CSSCCSSCCC
T ss_pred EEEcCCCCCC-CEeEeCCCCCCccCCcccccc--cCcCCCCCEE
Confidence 3469988654 899999997 899999999 6677877743
No 142
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=95.97 E-value=0.0043 Score=55.34 Aligned_cols=60 Identities=25% Similarity=0.545 Sum_probs=42.8
Q ss_pred CCCCCccccccCCCCCCCCCcEEEcc--cCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 687 KFSKILVCCVCLGERSDDVNEIVECD--SCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 687 ~~~~~~~C~VC~~~~~~~~n~iv~Cd--~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
...+...| ||...+ +...||.|| .|..=+|..|.|+...+.. ........|+|..|....
T Consensus 12 ~~~~~~~C-iC~~~~--~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~---~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 12 QPEIKVRC-VCGNSL--ETDSMIQCEDPRCHVWQHVGCVILPDKPMD---GNPPLPESFYCEICRLTS 73 (78)
T ss_dssp SCCCCCCC-SSCCCC--CCSCEEECSSTTTCCEEEHHHHSCCCTTTC---SCSCSCSSCCCHHHHHCC
T ss_pred CCCCCEEe-ECCCcC--CCCCEEEECCccCCccccCEEEcccccccc---ccccCCCCEECCCCCccc
Confidence 33456677 999763 456999999 9999999999999765310 000124689999998654
No 143
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=95.90 E-value=0.021 Score=67.60 Aligned_cols=149 Identities=13% Similarity=0.161 Sum_probs=94.7
Q ss_pred CCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHH
Q psy11602 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDE 98 (1083)
Q Consensus 19 ~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~ 98 (1083)
+...|+++-=-.+...+.......+..|+|++.++++||.|..... +..+|.+++.+....+- .|..
T Consensus 320 ~~~vLRThtsp~~lr~l~~N~~~~~~~PiriFeiGrVFR~d~~Dat-------HlpeFhQlegl~~~~~v------~f~d 386 (508)
T 3l4g_A 320 RKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDAT-------HLAEFHQIEGVVADHGL------TLGH 386 (508)
T ss_dssp TBEEECCCTHHHHHHHHHHHHTSSSCCCEEEEEEEEEECCSCCCSS-------SCSEEEEEEEEEEEESC------CHHH
T ss_pred ccccccCCChHHHHHHHHHhhhhcCCCCceEEEEccEEecCCCCCC-------cCCeEEEEEEEEECCCC------CHHH
Confidence 3456666554444444443222235689999999999999873221 45679999988876554 5777
Q ss_pred HHHHHHHHHHHcCC-ceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCccccccc
Q psy11602 99 MIQNSEEFYADLGI-AYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC 177 (1083)
Q Consensus 99 ~~~~y~~if~~LgL-pyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~~n~tg~ 177 (1083)
+....+.||++||+ .+|.. |+-.-+ ..-.+.++++.++.++|.||+.|--.---..+.++|. .+..+-+.|+
T Consensus 387 LKg~Le~~l~~lG~~~~rfr--ps~fPf--tePS~ev~i~~~G~~~W~EIGg~G~vhP~VL~~~Gip---e~~~v~AfgL 459 (508)
T 3l4g_A 387 LMGVLREFFTKLGITQLRFK--PAYNPY--TEPSMEVFSYHQGLKKWVEVGNSGVFRPEMLLPMGLP---ENVSVIAWGL 459 (508)
T ss_dssp HHHHHHHHHHTTTCCCCEEE--ECCCTT--CSSEEEEEECCSTTSSCEEEEEEECCCHHHHGGGTCC---TTEEEEEEEE
T ss_pred HHHHHHHHHHHcCCcceEee--ccCCCC--CCCeEEEEEEECCccceEEEEeeeeEcHHHHHHCCCC---CCceEEEEEe
Confidence 88888999999997 35533 332211 1112333555566668999999776655556666661 1122666788
Q ss_pred cchhheehee
Q psy11602 178 ATTRVICAIL 187 (1083)
Q Consensus 178 a~~Rli~All 187 (1083)
++.|++....
T Consensus 460 gLeRLaml~~ 469 (508)
T 3l4g_A 460 SLERPTMIKY 469 (508)
T ss_dssp ESHHHHTTTT
T ss_pred cHHHHHHHHc
Confidence 8888865433
No 144
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=95.85 E-value=0.0046 Score=54.23 Aligned_cols=36 Identities=25% Similarity=0.586 Sum_probs=29.5
Q ss_pred cccccccccCCCCC-CcceecCccCCCccccCCCCCCC
Q psy11602 1036 LSHKCGLCHLSHDP-HTMAKCDTCHLYYHLACLDPPLL 1072 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~-~~~~~Cd~C~~~yH~~Cl~Ppl~ 1072 (1083)
....| +|++..+. ..|+.||.|+.|||+.|+..+..
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~ 51 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNA 51 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTT
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCcc
Confidence 44556 79998765 47999999999999999987753
No 145
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=95.63 E-value=0.0027 Score=54.74 Aligned_cols=58 Identities=26% Similarity=0.631 Sum_probs=40.2
Q ss_pred CCCccccccCCCCCCCCCcEEEcc-cCCcccccccccccccCCCcccCCCCCCCCccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECD-SCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCR 749 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd-~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~ 749 (1083)
+....|.+|..+.. ++..+|.|| .|..=+|..|-|+...... .....+.+.|+|..|.
T Consensus 6 ~~~~~C~~C~~p~~-~~~~mI~CD~~C~~WfH~~Cvglt~~~~~--~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 6 DPVYPCGICTNEVN-DDQDAILCEASCQKWFHRICTGMTETAYG--LLTAEASAVWGCDTCM 64 (65)
T ss_dssp ---CBCTTTCSBCC-TTSCEEEBTTTTCCEEEHHHHTCCHHHHH--HHHHCTTEEECCHHHH
T ss_pred CCcCcCccCCCccC-CCCCeEecccCccccCchhccCCCHHHHH--HhhccCCCcEECcCcc
Confidence 44558999997643 467999999 9999999999999753100 0000145689999996
No 146
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=95.59 E-value=0.0078 Score=49.40 Aligned_cols=47 Identities=26% Similarity=0.735 Sum_probs=37.4
Q ss_pred cccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 693 ~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
+=+||+.+ +++..||.|++|..=+|..|.|+...+ ..+.|+|..|..
T Consensus 5 ~~C~C~~~--~~~~~MI~Cd~C~~W~H~~Cvgi~~~~---------~~~~~~C~~C~~ 51 (52)
T 3o7a_A 5 VTCFCMKP--FAGRPMIECNECHTWIHLSCAKIRKSN---------VPEVFVCQKCRD 51 (52)
T ss_dssp BCSTTCCB--CTTCCEEECTTTCCEEETTTTTCCGGG---------CCSSCCCHHHHT
T ss_pred eEEEeCCc--CCCCCEEEcCCCCccccccccCCCccc---------CCCcEECcCCCC
Confidence 44589854 346799999999999999999997642 246899999964
No 147
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=95.48 E-value=0.0054 Score=50.41 Aligned_cols=32 Identities=19% Similarity=0.564 Sum_probs=27.5
Q ss_pred ccccccCCCC-CCcceecC-ccCCCccccCCCCC
Q psy11602 1039 KCGLCHLSHD-PHTMAKCD-TCHLYYHLACLDPP 1070 (1083)
Q Consensus 1039 ~c~~C~~~~~-~~~~~~Cd-~C~~~yH~~Cl~Pp 1070 (1083)
.|.+|++..+ ...|+.|| .|+.|||..|+.-.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~ 37 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVS 37 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCC
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCC
Confidence 4889999875 67899999 89999999998743
No 148
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=95.27 E-value=0.0048 Score=50.68 Aligned_cols=48 Identities=27% Similarity=0.597 Sum_probs=37.2
Q ss_pred cccccCCCCCCCCCcEEEcc-cCCcccccccccccccCCCcccCCCCCCCCccccccc
Q psy11602 693 VCCVCLGERSDDVNEIVECD-SCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCR 749 (1083)
Q Consensus 693 ~C~VC~~~~~~~~n~iv~Cd-~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~ 749 (1083)
.|.+|..+.. ++..||.|| .|..=+|..|.|+...+. ....|+|..|+
T Consensus 4 ~cc~C~~p~~-~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~--------~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCK-DKVDWVQCDGGCDEWFHQVCVGVSPEMA--------ENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCC-TTCCEEECTTTTCCEEETTTTTCCHHHH--------HHSCCCCSCC-
T ss_pred cCCCCcCccC-CCCcEEEeCCCCCccCcccccCCCcccc--------CCCCEECCCCC
Confidence 6889987653 467899999 899999999999975421 13689999884
No 149
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=95.25 E-value=0.0081 Score=59.54 Aligned_cols=57 Identities=18% Similarity=0.344 Sum_probs=40.7
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
..+..|.||.+ +.+++-||.|-..+|..|..+...+...+ ....|.++|.|-.|...
T Consensus 61 g~~d~C~vC~~-----GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~-~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 61 GMDEQCRWCAE-----GGNLICCDFCHNAFCKKCILRNLGRKELS-TIMDENNQWYCYICHPE 117 (142)
T ss_dssp SCBCSCSSSCC-----CSSEEECSSSCCEEEHHHHHHHTCHHHHH-HHHTSTTCCCCTTTCCC
T ss_pred CCCCeecccCC-----CCcEEeCCCCCCeeeHhhcCCCCChhhhh-hcccCCCCCEeecccCc
Confidence 45679999984 45899999999999999998654311000 00026789999999753
No 150
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=95.11 E-value=0.0048 Score=53.15 Aligned_cols=34 Identities=24% Similarity=0.674 Sum_probs=27.5
Q ss_pred ccccccccccCCC-CCCcceecC-ccCCCccccCCC
Q psy11602 1035 VLSHKCGLCHLSH-DPHTMAKCD-TCHLYYHLACLD 1068 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~-~~~~~~~Cd-~C~~~yH~~Cl~ 1068 (1083)
.....|.+|++.. +...|+.|| .|+.|||..|+.
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 4566799999984 567899999 999999999975
No 151
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=94.96 E-value=0.022 Score=63.00 Aligned_cols=117 Identities=10% Similarity=0.056 Sum_probs=79.6
Q ss_pred hhh-hhhcccccccccccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCC-cEEEEeccCCCcchh
Q psy11602 287 MLD-EMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGI-AYRVVNIVSGALNHA 364 (1083)
Q Consensus 287 ~~~-~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~l-pyRvv~~~~~dl~~~ 364 (1083)
.+| +++....|||+... |..|.+||++++.+.+..++ ...|.+++..++.||+.||| +|+++.-. .+..
T Consensus 147 ~~PlrlfeiG~vFR~E~~--~~~r~~EF~qle~~i~g~~~----~~~f~elkg~le~ll~~LGl~~~~~~~~s-~e~~-- 217 (288)
T 3dsq_A 147 DKPIRIFEIGTCYRKESQ--GAQHLNEFTMLNLTELGTPL----EERHQRLEDMARWVLEAAGIREFELVTES-SVVY-- 217 (288)
T ss_dssp CSCEEEEEEEEEECSCCS--SSCCCSEEEEEEEEEETCCG----GGHHHHHHHHHHHHHHHHTCCCCEEEECC-CCSS--
T ss_pred CCCEEEEEEeeEEecCCC--CCCcCccEEEEEEEEEcCCc----hhhHHHHHHHHHHHHHHcCCCCcEEecCC-cceE--
Confidence 345 66777778886443 56688999999999998763 23489999999999999999 79987643 2321
Q ss_pred hhceeeEEEeeCCCCcEEeeecccCcccccc-cccceEEecccCCCCceeeEEeecccccchhHHHHHHHh
Q psy11602 365 AAKKLDLEAWFPGSGAFRELVSCSNCLAYQS-RRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILE 434 (1083)
Q Consensus 365 a~~~~DiE~w~P~~~~y~Ev~S~sn~~d~qa-rrl~iry~~~~~~~~~~~~~htln~t~~a~~R~i~ailE 434 (1083)
.+.+|+- . .|.||++++ ..-... ++++|. . .|. |.++.+.|++..+..
T Consensus 218 -~~~~~l~--~----~~~eig~~G-v~p~vl~~~~gi~----------~--~~~--gfglglerl~m~~~g 266 (288)
T 3dsq_A 218 -GDTVDVM--K----GDLELASGA-MGPHFLDEKWEIF----------D--PWV--GLGFGLERLLMIREG 266 (288)
T ss_dssp -CCCEEEE--E----TTEEEEEEE-EESCTTTTTTTCC----------S--CEE--EEEEEHHHHHHHHHT
T ss_pred -EEEEEEE--e----CCEEEEEEE-ecHHHHHHhcCCC----------C--CeE--EEEECHHHHHHHHcC
Confidence 3456653 2 378999988 443333 333331 1 122 568888998876654
No 152
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=94.91 E-value=0.0085 Score=53.03 Aligned_cols=32 Identities=25% Similarity=0.649 Sum_probs=28.2
Q ss_pred ccccccCCCCCCcceecCccCCCccccCCCCC
Q psy11602 1039 KCGLCHLSHDPHTMAKCDTCHLYYHLACLDPP 1070 (1083)
Q Consensus 1039 ~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Pp 1070 (1083)
..++|++..+...|+.||.|+.|||+.|+.-+
T Consensus 17 ~~C~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~ 48 (76)
T 1wem_A 17 LYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 48 (76)
T ss_dssp CCSTTCCCCCSSCEEECSSSCCEEEHHHHSCC
T ss_pred CEEECCCccCCCCEEEeCCCCCcEeCeEEccc
Confidence 44499999988899999999999999999754
No 153
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=94.82 E-value=0.0099 Score=56.04 Aligned_cols=34 Identities=24% Similarity=0.688 Sum_probs=28.3
Q ss_pred ccccccccCCC-CCCcceecC-ccCCCccccCCCCC
Q psy11602 1037 SHKCGLCHLSH-DPHTMAKCD-TCHLYYHLACLDPP 1070 (1083)
Q Consensus 1037 ~~~c~~C~~~~-~~~~~~~Cd-~C~~~yH~~Cl~Pp 1070 (1083)
...|.+|++.- +...|+.|| .|+.|||..|+.-.
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt 38 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMT 38 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCC
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcC
Confidence 35799999983 446799998 99999999999744
No 154
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=94.63 E-value=0.015 Score=51.89 Aligned_cols=53 Identities=23% Similarity=0.612 Sum_probs=39.6
Q ss_pred ccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 692 LVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 692 ~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
.+-++|..... +...||.||.|..=+|..|.|+...+.. ..+.|+|..|....
T Consensus 12 ~~~C~C~~~~d-~~~~MIqCd~C~~WfH~~Cvgl~~~~~~-------~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 12 PVYCLCRQPYN-VNHFMIECGLCQDWFHGSCVGIEEENAV-------DIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCSTTSCSCC-SSSCEEEBTTTCCEEEHHHHTCCHHHHT-------TCSBBCCTTTTTTS
T ss_pred ccEEEcCCccC-CCCceEEcCCCCCcEEeeecCccccccc-------CCCeEECCCccccc
Confidence 34449987542 3679999999999999999998754211 23689999998654
No 155
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=94.56 E-value=0.0062 Score=62.23 Aligned_cols=54 Identities=22% Similarity=0.617 Sum_probs=40.3
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.+...| +|..+. ++...||.||.|..-+|..|.|+...+. ...+.|+|..|...
T Consensus 6 ~~~~~C-~C~~~~-~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~-------~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPE-DESKFYIGCDRCQNWYHGRCVGILQSEA-------ELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEEC-CTTSCEEECTTTCCEEEHHHHTCCHHHH-------TTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCC-CCCCCEeECCCCCchhChhhcCCchhhc-------cCccCeecCCCcch
Confidence 455688 998653 2356899999999999999999865321 13578999999754
No 156
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=94.47 E-value=0.012 Score=55.42 Aligned_cols=59 Identities=24% Similarity=0.589 Sum_probs=42.0
Q ss_pred CccccccCCCCCCCCCcEEEcc-cCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 691 ILVCCVCLGERSDDVNEIVECD-SCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 691 ~~~C~VC~~~~~~~~n~iv~Cd-~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
...|.+|..+.. ++..+|.|+ .|..=+|..|-|+...... .....+.+.|+|..|....
T Consensus 3 ~~~C~iC~~p~~-~~~~mi~Cdd~C~~WfH~~CVglt~~~~~--~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVN-DDQDAILCEASCQKWFHRECTGMTESAYG--LLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCC-TTSCEEECTTTTCCEEEGGGTTCCHHHHH--HHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccC-CCCCEEEecCCcccccccccCCcCHHHHH--hhccCCCCCEECccccCcC
Confidence 348999997643 346799998 9999999999998752100 0000145789999998754
No 157
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=94.16 E-value=0.041 Score=53.63 Aligned_cols=57 Identities=16% Similarity=0.338 Sum_probs=39.7
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
..+..|.||.. +.+++-||.|-..+|..|..+...+... .....+.++|.|-.|...
T Consensus 55 g~~~~C~vC~d-----GG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l-~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 55 GMDEQCRWCAE-----GGNLICCDFCHNAFCKKCILRNLGRREL-STIMDENNQWYCYICHPE 111 (129)
T ss_dssp SCBSSCTTTCC-----CSEEEECSSSSCEEEHHHHHHHTCHHHH-HHHTCTTSCCCCTTTCCG
T ss_pred CCCCcCeecCC-----CCeeEecCCCchhhhHHHhCCCcchhHH-HHhccCCCCeEcCCcCCH
Confidence 45668999983 5689999999999999999864321000 000115789999999653
No 158
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=94.08 E-value=0.013 Score=52.23 Aligned_cols=32 Identities=25% Similarity=0.620 Sum_probs=27.0
Q ss_pred ccccccCCCC-CCcceecCccCCCccccCCCCC
Q psy11602 1039 KCGLCHLSHD-PHTMAKCDTCHLYYHLACLDPP 1070 (1083)
Q Consensus 1039 ~c~~C~~~~~-~~~~~~Cd~C~~~yH~~Cl~Pp 1070 (1083)
..++|++..| ...|+.||.|+.|||..|+.-+
T Consensus 13 ~~C~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~ 45 (79)
T 1wep_A 13 VYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIE 45 (79)
T ss_dssp CCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCC
T ss_pred cEEEcCCccCCCCceEEcCCCCCcEEeeecCcc
Confidence 3449999875 7899999999999999999743
No 159
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=94.01 E-value=0.015 Score=51.46 Aligned_cols=54 Identities=28% Similarity=0.663 Sum_probs=39.8
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
+...+-+||..+. +.+..||.|+.|..=+|..|.|+...+.. ..+.|+|..|..
T Consensus 7 ~~~~~yCiC~~~~-~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~-------~~~~~~C~~C~~ 60 (75)
T 3kqi_A 7 ATVPVYCVCRLPY-DVTRFMIECDACKDWFHGSCVGVEEEEAP-------DIDIYHCPNCEK 60 (75)
T ss_dssp CCCCEETTTTEEC-CTTSCEEECTTTCCEEEHHHHTCCTTTGG-------GBSSCCCHHHHH
T ss_pred CCCeeEEECCCcC-CCCCCEEEcCCCCCCEecccccccccccC-------CCCEEECCCCcc
Confidence 3444667998543 23679999999999999999999765321 135799999964
No 160
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=93.97 E-value=0.017 Score=51.12 Aligned_cols=54 Identities=20% Similarity=0.560 Sum_probs=37.7
Q ss_pred cccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 693 VCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 693 ~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
+-++|.... ++..||.||.|..=+|..|.|+...+... .......|+|..|...
T Consensus 17 ~~C~C~~~~--~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~---l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 17 LYCICRQPH--NNRFMICCDRCEEWFHGDCVGISEARGRL---LERNGEDYICPNCTIL 70 (76)
T ss_dssp CCSTTCCCC--CSSCEEECSSSCCEEEHHHHSCCHHHHHH---HHHHTCCCCCHHHHHH
T ss_pred CEEECCCcc--CCCCEEEeCCCCCcEeCeEEccchhhhhh---ccCCCCeEECcCCcCc
Confidence 444999654 35689999999999999999996542000 0002468999999753
No 161
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=93.96 E-value=0.013 Score=51.76 Aligned_cols=39 Identities=26% Similarity=0.576 Sum_probs=31.0
Q ss_pred ccccccccCCCC-CCcceecCccCCCccccCCCCCCCCCC
Q psy11602 1037 SHKCGLCHLSHD-PHTMAKCDTCHLYYHLACLDPPLLRMP 1075 (1083)
Q Consensus 1037 ~~~c~~C~~~~~-~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P 1075 (1083)
....++|++..+ ...|+.||.|+.|||..|+.-+-..++
T Consensus 9 ~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~ 48 (75)
T 3kqi_A 9 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAP 48 (75)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGG
T ss_pred CeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccC
Confidence 345669999865 678999999999999999986655444
No 162
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=93.86 E-value=0.043 Score=47.49 Aligned_cols=31 Identities=23% Similarity=0.646 Sum_probs=26.9
Q ss_pred cccccccCCCCCCcceecCc--cCCCccccCCC
Q psy11602 1038 HKCGLCHLSHDPHTMAKCDT--CHLYYHLACLD 1068 (1083)
Q Consensus 1038 ~~c~~C~~~~~~~~~~~Cd~--C~~~yH~~Cl~ 1068 (1083)
.+-++|+...+...|+.||. |+.|||+.|+.
T Consensus 10 ~v~C~C~~~~~~g~mI~CD~~~C~~W~H~~Cvg 42 (68)
T 2rsd_A 10 KVRCICSSTMVNDSMIQCEDQRCQVWQHLNCVL 42 (68)
T ss_dssp EECCTTCCCSCCSCEEECSCTTTCEEEETTTSC
T ss_pred CEEeECCCCcCCCCEEEECCCCCCCeEchhhCC
Confidence 34458999988899999996 99999999984
No 163
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=93.75 E-value=0.0038 Score=60.90 Aligned_cols=42 Identities=19% Similarity=0.457 Sum_probs=34.6
Q ss_pred ccccccccCCCCCCcceecCccCCCccccCCCCCC-----CCC--CCCCcCC
Q psy11602 1037 SHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPPL-----LRM--PKKTKLM 1081 (1083)
Q Consensus 1037 ~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Ppl-----~~~--P~~~~~~ 1081 (1083)
...|.+|+..++ ++.||.|.+.||..||+||| .++ |.+.|.+
T Consensus 57 ~~~C~vC~dGG~---LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C 105 (129)
T 3ql9_A 57 DEQCRWCAEGGN---LICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYC 105 (129)
T ss_dssp BSSCTTTCCCSE---EEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCC
T ss_pred CCcCeecCCCCe---eEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEc
Confidence 345999998776 99999999999999999995 455 8888543
No 164
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A*
Probab=93.64 E-value=0.47 Score=53.74 Aligned_cols=146 Identities=14% Similarity=0.104 Sum_probs=85.7
Q ss_pred CCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHH
Q psy11602 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDE 98 (1083)
Q Consensus 19 ~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~ 98 (1083)
+..+|+.+-.-.+...+.. ...|++++.++.+||.|.. +.. +..||++++.+.+..+- .|..
T Consensus 171 ~~~vLRt~tsp~llr~l~~-----~~~piriFEiGrVFR~d~~----d~t---H~pEF~qlegl~~g~~v------~f~d 232 (350)
T 1b7y_A 171 GRLLLRTHTSPMQVRYMVA-----HTPPFRIVVPGRVFRFEQT----DAT---HEAVFHQLEGLVVGEGI------AMAH 232 (350)
T ss_dssp SCEEECSSSTHHHHHHHHH-----CCSSEEEEEEEEEECCCCC----CSS---CCSEEEEEEEEEEETTC------CHHH
T ss_pred ccceeeccchHHHHHHHHh-----cCCCeeEEEeeeEEECCCC----CCC---CCChhHEEEEEEECCCC------CHHH
Confidence 3446676555555544443 4779999999999997651 111 33799999999998754 3677
Q ss_pred HHHHHHHHHHHc-CCceEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcc-------cceeccCCC
Q psy11602 99 MIQNSEEFYADL-GIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRL-------LVRYGQTKQ 170 (1083)
Q Consensus 99 ~~~~y~~if~~L-gLpyrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl-------~i~y~~~~~ 170 (1083)
+....+.|++.| |++..+--.++..-+---+.++|| +....++|.+|+.|.-.--...+.+ +|.-.....
T Consensus 233 LKg~le~ll~~lfG~~~~~r~rps~fPft~Ps~e~~i--~~~~~g~w~eIg~~G~VhP~Vl~~~~~~~~~~gid~~~~~~ 310 (350)
T 1b7y_A 233 LKGAIYELAQALFGPDSKVRFQPVYFPFVEPGAQFAV--WWPEGGKWLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGV 310 (350)
T ss_dssp HHHHHHHHHHHHSCSSCCEEEEECCBTTEEEEEEEEE--EETTTTEEEEEEEEEEECHHHHHHHHHHHHHTTCCCCCTTC
T ss_pred HHHHHHHHHHhhcCCCceEEEecCCCCCCCCccEEEE--EEEeCCCeEEEEEEEEEeHHHHHhhccccccCCCCCccccc
Confidence 888888999988 864322223332222222333333 4332456888888654433344444 551000111
Q ss_pred ccccccccchhhee
Q psy11602 171 KIYATACATTRVIC 184 (1083)
Q Consensus 171 ~~n~tg~a~~Rli~ 184 (1083)
..-..++.+.|++-
T Consensus 311 ~~~afglglerl~m 324 (350)
T 1b7y_A 311 TGFAFGLGVERLAM 324 (350)
T ss_dssp EEEEEEEEHHHHHH
T ss_pred eEEEEEEeHHHHHH
Confidence 24455777777643
No 165
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=93.58 E-value=0.027 Score=50.13 Aligned_cols=35 Identities=29% Similarity=0.845 Sum_probs=29.3
Q ss_pred cccccccccCCCCCCcceecC--ccCCCccccCCCCCC
Q psy11602 1036 LSHKCGLCHLSHDPHTMAKCD--TCHLYYHLACLDPPL 1071 (1083)
Q Consensus 1036 ~~~~c~~C~~~~~~~~~~~Cd--~C~~~yH~~Cl~Ppl 1071 (1083)
....| +|++..+...|+.|| .|+.|||+.|+.-+-
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~ 51 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPD 51 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCC
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEcccc
Confidence 34455 899998888999999 999999999997543
No 166
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=93.11 E-value=0.033 Score=57.60 Aligned_cols=57 Identities=16% Similarity=0.431 Sum_probs=40.9
Q ss_pred ccccccccccCCCC-CcceeecccccccccccCCCccceeeecccccccccccccccccc----cCCCCCCccccccc
Q psy11602 546 PICAVHRDSWLPEA-SLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEV----DQADPFYAHCRLHA 618 (1083)
Q Consensus 546 ~~c~~~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~~c~~~~H~~ca~~~g~~~e~~~~~~----~~~~p~~~~c~~h~ 618 (1083)
.+|.+|++.|.+.+ +..+ |+|| .|..|+|..|.. |+++..+.. +...++++.|+...
T Consensus 3 ~~CpiC~k~Y~~~~~~~~M----------IqCd--~C~~W~H~~Cvg----i~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKM----------MQCG--KCDRWVHSKCEN----LSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCE----------EECT--TTCCEEEGGGSS----CCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred CcCCCCcCccCCcccCCCe----------EECC--CCCcccchhccc----cCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 48999999999876 5667 8999 999999999986 444322211 12357777777554
No 167
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A*
Probab=92.54 E-value=0.39 Score=57.12 Aligned_cols=145 Identities=12% Similarity=0.167 Sum_probs=93.2
Q ss_pred eeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccc-cCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHH
Q psy11602 21 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVG-SHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEM 99 (1083)
Q Consensus 21 ~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~-~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~ 99 (1083)
.+|+++-=-.+....+ ..+..+..|++++.++.+||.+.. ..+ +.+||.+.+...+..+. .|..+
T Consensus 181 svLRTsLlPgLL~~lr-~N~~r~~~pvrLFEIG~VFr~d~~~d~t-------h~~Ef~qLagli~G~~v------df~dL 246 (534)
T 2du3_A 181 LTLRSHMTTGWFITLS-HIADKLPLPIKLFSIDRCFRREQGEDAT-------RLYTYFSASCVLVDEEL------SVDDG 246 (534)
T ss_dssp EEECSSHHHHHHHHHH-TTTTTSCSSEEEEEEEEEECCCTTCSSS-------CCSEEEEEEEEEECSSC------CHHHH
T ss_pred cccCccchhhHHHHHH-HHHhCCCCCeeEEEEeeEEecCcccccc-------ccceeeEEEEEEECCCC------CHHHH
Confidence 4677664443434333 234566899999999999997641 111 34799999998887644 35678
Q ss_pred HHHHHHHHHHcCCc-eEEEEeccC--CCCcccceeEeEEEEecCC--------CceeEEEEcCCCchhhhhcccceeccC
Q psy11602 100 IQNSEEFYADLGIA-YRVVNIVSG--ALNHAAAKKLDLEAWFPGS--------GAFRELVSCSNCLDYQSRRLLVRYGQT 168 (1083)
Q Consensus 100 ~~~y~~if~~LgLp-yrvv~~~sg--dlg~~as~~~diE~~~P~~--------~~~~ev~s~s~cgdyqs~rl~i~y~~~ 168 (1083)
....+.|++.||+. ++....... ...+.-+ ..|+++.|.. ++|.+|+.|.-.---..+.+++.
T Consensus 247 KgilE~LL~~LGi~~~r~~~~~~~~~~yhPgt~--aeI~v~~~~~~g~~~~~~~gW~eIG~~G~vhP~VL~~~gi~---- 320 (534)
T 2du3_A 247 KAVAEALLRQFGFENFRFRKDEKRSKYYIPDTQ--TEVFAFHPKLVGSSTKYSDGWIEIATFGIYSPTALAEYDIP---- 320 (534)
T ss_dssp HHHHHHHHGGGTCCEEEEEECTTCCTTBCTTTC--EEEEEEEEEEETCSSSCTEEEEEEEEEEEBCHHHHHTTTCC----
T ss_pred HHHHHHHHHHcCCCeEEEEECCCCcccccCCeE--EEEEEEeccccccccccCCCCEEEEEEEEECHHHHHHcCCC----
Confidence 88889999999996 666543211 1444433 5566665532 35788988765555556666663
Q ss_pred CCccccccccchhheehe
Q psy11602 169 KQKIYATACATTRVICAI 186 (1083)
Q Consensus 169 ~~~~n~tg~a~~Rli~Al 186 (1083)
..+...++.+.|++..+
T Consensus 321 -~~v~afeLgLErLaMl~ 337 (534)
T 2du3_A 321 -YPVMNLGLGVERLAMIL 337 (534)
T ss_dssp -SCEEEEEEEHHHHHHHH
T ss_pred -CcEEEEEecHHHHHHhh
Confidence 22566678888876543
No 168
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=91.56 E-value=0.04 Score=49.27 Aligned_cols=35 Identities=23% Similarity=0.611 Sum_probs=29.7
Q ss_pred ccccccccccCCCCCCcceecCccCCCccccCCCCC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLDPP 1070 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~Pp 1070 (1083)
..-..|.||.... .+.++-|..|.+.||..||.++
T Consensus 13 ~~D~~C~VC~~~t-~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 13 VNDEMCDVCEVWT-AESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTTCCCC-SSCCSSCSSSSSCCCHHHHHHH
T ss_pred CCCcccCcccccc-ccceeccccccccccHhhcccc
Confidence 3556799999766 5668899999999999999998
No 169
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=91.45 E-value=0.07 Score=47.74 Aligned_cols=68 Identities=18% Similarity=0.335 Sum_probs=47.1
Q ss_pred ecccccCCCCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCC----CcccCCCCCCCCcccccccCC
Q psy11602 681 QLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTAS----ISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 681 ~~~d~~~~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~----~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
+++.......|..|.||..-+ .+.++-|.-|+..+|..|........ ..-+....++..|.|--|.+-
T Consensus 5 ~~~~~e~~~~D~~C~VC~~~t---~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 5 SSGPREPVVNDEMCDVCEVWT---AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CCCSCCCCCCSCCCTTTCCCC---SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred ccCcccCCCCCcccCcccccc---ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 344445567899999998653 57899999999999999986531100 011112236788999999874
No 170
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A*
Probab=91.23 E-value=0.37 Score=53.27 Aligned_cols=70 Identities=11% Similarity=0.035 Sum_probs=46.5
Q ss_pred CCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeecccccccc--ccCCCCCCCceEEE-EEeEEEEEEEeCCCchHH
Q psy11602 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEV--GSHGRDTRGIFRVH-QFEKVEQFVLTSPHDDES 92 (1083)
Q Consensus 16 r~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~--~~~gk~trGL~R~r-EF~~~e~~~~~~~~~e~s 92 (1083)
-.+++++|..+.|..+--+.. . -|.|+|+|+++||+|. ...+ |.+ ||+|+|.+.+..+. ++.
T Consensus 65 ~~~~~~~L~~Spe~~~~~l~~----~---g~~rvf~ig~~FR~E~pq~~~~-------RH~~EFtqle~e~~~~~~-~~l 129 (294)
T 1nnh_A 65 IYGVKMRLTHSMILHKQLAIA----M---GLKKIFVLSPNIRLESRQKDDG-------RHAYEFTQLDFEVERAKM-EDI 129 (294)
T ss_dssp ETTEEEEECSCSHHHHHHHHH----T---TCCEEEEEEEEECCCCGGGCSS-------SCCSEEEEEEEEEETCCH-HHH
T ss_pred cCCCCEEeccChHHHHHHHhh----c---CccceEEEEccEeCCCCCCCCC-------ccccceeEEEEEecCCCH-HHH
Confidence 345678897666654433332 1 2779999999999998 3223 445 99999999998764 444
Q ss_pred HHHHHHHH
Q psy11602 93 WKMLDEMI 100 (1083)
Q Consensus 93 ~~~~~~~~ 100 (1083)
....++++
T Consensus 130 ~~~~e~l~ 137 (294)
T 1nnh_A 130 MRLIERLV 137 (294)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444444
No 171
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A*
Probab=90.64 E-value=1.5 Score=48.42 Aligned_cols=79 Identities=15% Similarity=0.271 Sum_probs=59.3
Q ss_pred CCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHH
Q psy11602 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDE 98 (1083)
Q Consensus 19 ~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~ 98 (1083)
+..+|+++-.-.+...++... ...|++++.++.+||.+.. +.. ...||++.+.+....+- .|..
T Consensus 108 e~~vLRtsl~p~ll~~l~~N~---~~~~~riFEiG~Vfr~d~~----d~~---h~~Ef~~Le~~~~g~~~------df~d 171 (294)
T 2rhq_A 108 DEILMRTHTSPVQARTMEKRN---GQGPVKIICPGKVYRRDSD----DAT---HSHQFTQIEGLVVDKNI------KMSD 171 (294)
T ss_dssp SSEEECSSSHHHHHHHHHHTT---TCSCEEEEEEEEEECCCCC----BTT---BCSEEEEEEEEEEESSC------CHHH
T ss_pred CcceeeccCHHHHHHHHHhcC---CCCCccEEEEcCEEecCCC----CCC---CCChhhEEEEEEECCCC------CHHH
Confidence 456888888877777666544 5789999999999997541 111 22499999999998654 3677
Q ss_pred HHHHHHHHHHHc-CCc
Q psy11602 99 MIQNSEEFYADL-GIA 113 (1083)
Q Consensus 99 ~~~~y~~if~~L-gLp 113 (1083)
+....+.+++.| |++
T Consensus 172 lKg~le~ll~~l~g~~ 187 (294)
T 2rhq_A 172 LKGTLELVAKKLFGAD 187 (294)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCCC
Confidence 888888899988 875
No 172
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii}
Probab=90.37 E-value=0.33 Score=56.59 Aligned_cols=73 Identities=11% Similarity=0.091 Sum_probs=50.5
Q ss_pred CCCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEE-EEeEEEEEEEeCCCch
Q psy11602 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH-QFEKVEQFVLTSPHDD 90 (1083)
Q Consensus 12 ~~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~r-EF~~~e~~~~~~~~~e 90 (1083)
...|..+++++|.-+.|..+--+... +.|+|+++++||+|....+ |.. ||+|+|.+....+. +
T Consensus 173 f~~~~~~~~~~L~~Spql~~~~~~~g--------~~rvf~ig~~FR~E~~~~~-------RH~pEFtqle~e~~~~~~-~ 236 (429)
T 1wyd_A 173 FPVIYFGKEAFLAQSPQLYKELMAGV--------VERVFEVAPAWRAEESDTP-------FHLAEFISMDVEMAFADY-N 236 (429)
T ss_dssp CEEEETTEEEEECSCCHHHHHHHHHH--------HSEEEEEEEEECCCCCCSS-------SCCSEEEEEEEEEETCCH-H
T ss_pred EEEecCCceEEecCCcHHHHHHHHhC--------cCceEEEcccccccCCccc-------cccceeeEeeeeecCCCH-H
Confidence 34455677889976666553333321 6799999999999974333 555 99999999988764 5
Q ss_pred HHHHHHHHHH
Q psy11602 91 ESWKMLDEMI 100 (1083)
Q Consensus 91 ~s~~~~~~~~ 100 (1083)
+.....++++
T Consensus 237 dlm~~~e~ll 246 (429)
T 1wyd_A 237 DVMQLLEKIL 246 (429)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555555
No 173
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=89.78 E-value=0.16 Score=58.64 Aligned_cols=65 Identities=22% Similarity=0.174 Sum_probs=47.6
Q ss_pred chhhhh-hhhcccccccccccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCc-EEEE
Q psy11602 284 SWKMLD-EMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIA-YRVV 354 (1083)
Q Consensus 284 s~~~~~-~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lp-yRvv 354 (1083)
+++++| ++++...+||+.+...| |.+||...-.-.|..++ .++ -.|++..+.++|+.|||+ |+++
T Consensus 96 ~~~~lP~rl~~~g~vfR~e~p~~g--R~REf~Q~g~e~~g~~~-~~a---d~e~i~~~~~~l~~lgl~~~~i~ 162 (421)
T 1h4v_B 96 KVWPQPVRLWMAGPMFRAERPQKG--RYRQFHQVNYEALGSEN-PIL---DAEAVVLLYECLKELGLRRLKVK 162 (421)
T ss_pred cccCCCeEEEEecCeecCCCCCCC--CcccEEEccEEEECCCC-hhh---hHHHHHHHHHHHHHcCCCceEEE
Confidence 456778 88898999999866556 99999984444444432 122 247889999999999998 7765
No 174
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=88.98 E-value=0.09 Score=50.03 Aligned_cols=44 Identities=16% Similarity=0.271 Sum_probs=31.7
Q ss_pred ccccccccccCCCC-CCcceecCccCCCccccCCCCCCCCCCCCC
Q psy11602 1035 VLSHKCGLCHLSHD-PHTMAKCDTCHLYYHLACLDPPLLRMPKKT 1078 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~-~~~~~~Cd~C~~~yH~~Cl~Ppl~~~P~~~ 1078 (1083)
..+..|..|....+ +..|+.|+.|+.+||..|+.++...++.+.
T Consensus 57 ~~c~~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~ 101 (117)
T 4bbq_A 57 SLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEE 101 (117)
T ss_dssp TTTCCBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSS
T ss_pred cccCcccccccccccCcceEEeeecCCeEECCCCCCCcccccccc
Confidence 34445555544433 556889999999999999999987765543
No 175
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=88.57 E-value=0.42 Score=56.62 Aligned_cols=71 Identities=14% Similarity=0.078 Sum_probs=48.0
Q ss_pred CCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHH
Q psy11602 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWK 94 (1083)
Q Consensus 15 dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~ 94 (1083)
|..+.+++|+-..|.-+=-++. + -.-|+|+|++|||+|--.. -|..||+|+|.|....+. ++..+
T Consensus 218 ~~~~~~~yLr~SpqLylk~l~v----~---G~~rVyeig~~FR~E~~~~-------rH~pEFT~lE~e~af~d~-~dlm~ 282 (493)
T 3a74_A 218 NALDMTLYMRIAIELHLKRLIV----G---GLEKVYEIGRVFRNEGIST-------RHNPEFTMLELYEAYADF-RDIMK 282 (493)
T ss_dssp TTTTEEEEECSCSHHHHHHHHH----T---TCCEEEEEEEEECCCCCBT-------TBCSEEEEEEEEEETCCH-HHHHH
T ss_pred cCCCceeEEecCHHHHHHHHhh----c---ccCceEEECccccCCCCCc-------ccCCceeEEEEEecCCCH-HHHHH
Confidence 5567789999555632211111 1 1458999999999997432 388999999999988764 45555
Q ss_pred HHHHHH
Q psy11602 95 MLDEMI 100 (1083)
Q Consensus 95 ~~~~~~ 100 (1083)
..++|+
T Consensus 283 l~E~ll 288 (493)
T 3a74_A 283 LTENLI 288 (493)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555544
No 176
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=88.48 E-value=0.46 Score=55.38 Aligned_cols=72 Identities=17% Similarity=0.032 Sum_probs=48.1
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEE-EEeEEEEEEEeCCCchH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH-QFEKVEQFVLTSPHDDE 91 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~r-EF~~~e~~~~~~~~~e~ 91 (1083)
..|..+++++|+-+.|..+-.+.. -|.|+|+++++||+|....+ |.. ||+|+|.+....+. ++
T Consensus 175 ~~~~~~~~~~Lr~Spel~~~~~~~--------g~~rvf~ig~~FR~E~~~~~-------RH~pEFtqle~e~~~~~~-~d 238 (434)
T 1x54_A 175 KLKYFDKYAYLSQSAQLYLEAAIF--------GLEKVWSLTPSFRAEKSRTR-------RHLTEFWHLELEAAWMDL-WD 238 (434)
T ss_dssp EEEETTEEEEECSCSHHHHHHHHH--------HHSEEEEEEEEECCCCCCCS-------SCCSEEEEEEEEEETCCH-HH
T ss_pred EEeecCCcEEeccChHHHHHHHhc--------CccceEEEecceecCCCCCc-------ccccEEEEeeEEEcCCCH-HH
Confidence 445566778998444543322221 27799999999999974333 445 99999999988764 55
Q ss_pred HHHHHHHHH
Q psy11602 92 SWKMLDEMI 100 (1083)
Q Consensus 92 s~~~~~~~~ 100 (1083)
.....++++
T Consensus 239 lm~~~e~ll 247 (434)
T 1x54_A 239 IMKVEEELV 247 (434)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555554
No 177
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=88.42 E-value=0.26 Score=50.85 Aligned_cols=59 Identities=22% Similarity=0.482 Sum_probs=37.9
Q ss_pred ccccccCCCCCCC--CCcEEEcccCCcccccccccccccCCCcccCCCCC-CCCcccccccCCC
Q psy11602 692 LVCCVCLGERSDD--VNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCS-TEPWFCESCRAGI 752 (1083)
Q Consensus 692 ~~C~VC~~~~~~~--~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~-~~~W~Cd~C~~~~ 752 (1083)
..|.||.....++ +..||.||.|..=||..|-|+...... ..+..| ...|+|..|....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e--~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYE--ILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHH--HHHHSHHHHCCCCTTTCCSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHH--HhhcCCCCCeeECcCCCCCC
Confidence 3799998654432 235999999999999999998641000 000001 1368888887654
No 178
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=87.90 E-value=0.33 Score=54.97 Aligned_cols=67 Identities=12% Similarity=0.159 Sum_probs=44.9
Q ss_pred CCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHH
Q psy11602 19 DDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDE 98 (1083)
Q Consensus 19 ~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~ 98 (1083)
.++||.-+.|.-+--++..- + =|+|||++|||+|--.+ -|.-||+|+|.|....+. ++..+..++
T Consensus 89 ~~~yL~~Spql~~k~l~~~g------~-~rvyqIg~~FR~E~~~~-------rH~pEFt~lE~e~af~d~-~d~m~~~E~ 153 (345)
T 3a5y_A 89 MNLWLMTSPEYHMKRLLVAG------C-GPVFQLCRSFRNEEMGR-------YHNPEFTMLEWYRPHYDM-YRLMNEVDD 153 (345)
T ss_dssp EEEEECSCSHHHHHHHHHTT------C-CSEEEEEEEECCCCCBT-------TBCSEEEEEEEEEETCCH-HHHHHHHHH
T ss_pred CCEeecCCHHHHHHHHHHcC------C-CcEEEEEcceeCCCCcc-------cccchhheeeeeeeCCCH-HHHHHHHHH
Confidence 56888777775544233221 1 28999999999998432 278899999999887754 444444444
Q ss_pred HH
Q psy11602 99 MI 100 (1083)
Q Consensus 99 ~~ 100 (1083)
++
T Consensus 154 li 155 (345)
T 3a5y_A 154 LL 155 (345)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 179
>1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A*
Probab=87.66 E-value=0.94 Score=53.57 Aligned_cols=81 Identities=15% Similarity=0.071 Sum_probs=51.7
Q ss_pred CCCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEE-EEeEEEEEE-EeCCCc
Q psy11602 12 APEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH-QFEKVEQFV-LTSPHD 89 (1083)
Q Consensus 12 ~~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~r-EF~~~e~~~-~~~~~~ 89 (1083)
...+..++.++|+-+.|..+--++. . -+-|+|+|++|||+|-...+ |.. ||+|+|.+. |..+.
T Consensus 217 f~~~~~~~~~~L~~Spql~~k~l~~----~---g~~rvy~ig~~FR~E~~~~~-------Rh~pEFt~le~e~af~~~~- 281 (487)
T 1eov_A 217 FEVTYFKGKAYLAQSPQFNKQQLIV----A---DFERVYEIGPVFRAENSNTH-------RHMTEFTGLDMEMAFEEHY- 281 (487)
T ss_dssp CEEEETTEEEEECSCTHHHHHHHHH----T---TCCEEEEEEEEECCCCCCCT-------TCCSEEEEEEEEEECSSCT-
T ss_pred ceeccCCccEEcccChHHHHHHHHh----c---CCCceEEEeccEecCCCCCC-------ccchhhhhhhhhhhhhcCH-
Confidence 3444456788998777764422221 1 14599999999999984333 555 999999976 55444
Q ss_pred hHHHHHHHHHH-HHHHHHH
Q psy11602 90 DESWKMLDEMI-QNSEEFY 107 (1083)
Q Consensus 90 e~s~~~~~~~~-~~y~~if 107 (1083)
++..+..++|+ .+...+.
T Consensus 282 ~dlm~l~E~ll~~l~~~v~ 300 (487)
T 1eov_A 282 HEVLDTLSELFVFIFSELP 300 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 55666666665 3333443
No 180
>3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=87.53 E-value=2.5 Score=47.39 Aligned_cols=125 Identities=13% Similarity=0.196 Sum_probs=76.2
Q ss_pred CCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHHHHHHHHHHHHc---CCceEEE
Q psy11602 41 PEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADL---GIAYRVV 117 (1083)
Q Consensus 41 s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~~~~y~~if~~L---gLpyrvv 117 (1083)
.+...|++++.++.+||.+.... ...+|.++|.+..+.+- .|..+....+.|++.| ++.+|.
T Consensus 179 ~~~~~pirifeiGrVyR~d~d~t--------h~p~fhqlegl~v~~~v------~f~dLKg~Le~~l~~lfg~~~~vr~- 243 (327)
T 3pco_A 179 KAQQPPIRIIAPGRVYRNDYDQT--------HTPMFHQMEGLIVDTNI------SFTNLKGTLHDFLRNFFEEDLQIRF- 243 (327)
T ss_dssp TTCCSSCCBCCEECCBCSCCBTT--------BCSBCCEEEEEEEETTC------CHHHHHHHHHHHHHHHHCSCSEEEE-
T ss_pred HhCCCCeeEEeeccEEecCCCcc--------cCCcccEEEEEEECCCC------CHHHHHHHHHHHHHHHhCCCceEEE-
Confidence 34578999999999999974322 22347777777766443 4677788888888887 466553
Q ss_pred EeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCccccccccchhheehe
Q psy11602 118 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACATTRVICAI 186 (1083)
Q Consensus 118 ~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~~n~tg~a~~Rli~Al 186 (1083)
.|+-.-+---+.+.| ++.. .++|.||+-|--.--...+.++|. .......+.|+++.|++...
T Consensus 244 -rps~fPftePs~ead--I~~~-~G~w~EIgg~G~VHP~Vl~~~gid--~~~~~g~AFglgleRlaml~ 306 (327)
T 3pco_A 244 -RPSYFPFTEPSAEVD--VMGK-NGKWLEVLGCGMVHPNVLRNVGID--PEVYSGFAFGMGMERLTMLR 306 (327)
T ss_dssp -EEECCTTEEEEEEEE--EECS-SSCEEEEEEEEEECHHHHHTTTCC--TTTCEEEEEEEEHHHHHHHH
T ss_pred -ecCcCCCCCCcEEEE--EEEe-CCCeEEEEEEEEECHHHHHHcCCC--CccceEEEEEechHHHHHHH
Confidence 344332222234444 4542 466899988754443445555552 11122566788888885543
No 181
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A
Probab=87.41 E-value=0.29 Score=58.14 Aligned_cols=71 Identities=15% Similarity=0.111 Sum_probs=47.5
Q ss_pred CCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHH
Q psy11602 15 KDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWK 94 (1083)
Q Consensus 15 dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~ 94 (1083)
+..+.++||+-..|.-+=-++.. . .-|+|+|++|||+|--. + -|..||+|+|.|....+. ++..+
T Consensus 227 ~~~~~~~yL~~SpqLylk~L~v~---G----~~rVyeIg~~FR~E~~~----~---rH~pEFt~lE~e~af~d~-~dlm~ 291 (504)
T 1e1o_A 227 NALDLDMYLRIAPELYLKRLVVG---G----FERVFEINRNFRNEGIS----V---RHNPEFTMMELYMAYADY-HDLIE 291 (504)
T ss_dssp TTTTEEEEECSCSHHHHHHHHHH---T----CCEEEEEEEEECCCCCC----C----CCSEEEEEEEEEESCCH-HHHHH
T ss_pred CCCCceEEeccCHHHHHHHHhhc---C----CCcEEEEcccccCCCCC----c---cccCceeeeeeeecCCCH-HHHHH
Confidence 45677899986666333222211 1 34899999999999732 2 388899999999988764 45555
Q ss_pred HHHHHH
Q psy11602 95 MLDEMI 100 (1083)
Q Consensus 95 ~~~~~~ 100 (1083)
..++|+
T Consensus 292 l~E~li 297 (504)
T 1e1o_A 292 LTESLF 297 (504)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 182
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=87.21 E-value=0.28 Score=57.69 Aligned_cols=126 Identities=14% Similarity=0.206 Sum_probs=72.4
Q ss_pred ccccccccccccCCCCccccccCcccchHHHHHHhhhhcccchhhhhhhhhc-cccccccccCceEeeecc-ceEEEEee
Q psy11602 200 DCLRKFVPAVYLNEAGEIPFVKTAPIDEEETKKQKKQKEGMKKKLTMSLFSQ-VGSHGRDTRGIFRVHQFE-KVEQFVLT 277 (1083)
Q Consensus 200 ~~L~p~~~~~~~~~~G~~pv~~P~~i~~d~~~~~~~k~~~~k~~~~~~~~~e-~g~h~~dl~~i~Rv~qfd-~~~~~~~~ 277 (1083)
..|..++.+.+. ..||.+|.+|++...+...... ++ .+.+.+ .+|+...-+ + +.+.+
T Consensus 50 ~~l~~~i~~~~~-~~Gy~eI~tP~le~~el~~~~~---------------G~~~d~~~~---~my~~~D~~~g-~~l~L- 108 (467)
T 4e51_A 50 EFFEATVKSLLR-AYGYQNIRTPIVEHTPLFTRGI---------------GEVTDIVEK---EMYSFVDALNG-ENLTL- 108 (467)
T ss_dssp HHHHHHHHHHHH-HTTCEECBCCSEEEHHHHHHHT---------------CTTSHHHHH---TCCEEECTTTC-CEEEE-
T ss_pred HHHHHHHHHHHH-HcCCEEEECCccccHHHhhhcc---------------CCccccccc---ceEEEecCCCC-CEEEe-
Confidence 445555555553 7899999999998866543331 11 010111 344332211 1 11111
Q ss_pred CCC-----------CCcchhhhh-hhhcccccccccccCcCceeEEEeee--EEEEEEeCCCchhHHHHHHHHHHHHHHH
Q psy11602 278 SPH-----------DDESWKMLD-EMIQNSEEFYADLDTRGIFRVHQFEK--VEQFVLTSPHDDESWKTLDEMIQNSEEF 343 (1083)
Q Consensus 278 ~~~-----------~~~s~~~~~-~~~~~~~~~~~~~~trGl~Rvhqf~k--vE~f~~~~~~~~~s~~~~e~~~~~~e~~ 343 (1083)
.|. ...++ .+| +++....+||+.+..+| |++||+. +|+|+...+ .+. .|++..+.++
T Consensus 109 RPd~t~~~ar~~~~~~~~~-~lP~r~~~~g~vfR~E~~~~g--R~ReF~Q~d~ei~g~~~~---~ad---aEvi~l~~~~ 179 (467)
T 4e51_A 109 RPENTAAVVRAAIEHNMLY-DGPKRLWYIGPMFRHERPQRG--RYRQFHQVGVEALGFAGP---DAD---AEIVMMCQRL 179 (467)
T ss_dssp CSCSHHHHHHHHHHTTTTT-TSCEEEEEEEEEECCCCC-----CCSEEEEEEEEEETCCCS---HHH---HHHHHHHHHH
T ss_pred CcccHHHHHHHHHHccccc-CCCEEEEEEccEEccCCCCCC--CcCceEEEEEEEEeCCCh---HHH---HHHHHHHHHH
Confidence 110 12234 356 77888889998765554 7778887 666655444 232 6899999999
Q ss_pred HHHhCC-cEEEEe
Q psy11602 344 YADLGI-AYRVVN 355 (1083)
Q Consensus 344 ~~~L~l-pyRvv~ 355 (1083)
|+.||| .|+|..
T Consensus 180 l~~lGl~~~~i~i 192 (467)
T 4e51_A 180 WEDLGLTGIKLEI 192 (467)
T ss_dssp HHHHTCCCEEEEE
T ss_pred HHHcCCCceEEEE
Confidence 999999 476654
No 183
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=86.99 E-value=0.4 Score=55.65 Aligned_cols=64 Identities=14% Similarity=0.143 Sum_probs=47.8
Q ss_pred hhh-hhhcccccccccccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCc--EEEEec
Q psy11602 287 MLD-EMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIA--YRVVNI 356 (1083)
Q Consensus 287 ~~~-~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lp--yRvv~~ 356 (1083)
++| ++++...+||+.+...| |.+||...-.-.|..++ ..+ -.|++..+.++|+.|||+ |+++.-
T Consensus 97 ~lP~rl~~~g~vfR~erp~~g--R~REF~Q~d~ei~g~~~-~~a---d~E~i~~~~~~l~~lgl~~~~~i~l~ 163 (434)
T 1wu7_A 97 QRPLRWYSFPKVWRYEEPQAG--RYREHYQFNADIFGSDS-PEA---DAEVIALASSILDRLGLQDIYEIRIN 163 (434)
T ss_dssp CSSEEEEECCEEECCCCSCSS--CCSEEEEEEEEEESCCS-HHH---HHHHHHHHHHHHHHTTTTTSEEEEEE
T ss_pred CCCeEEEEEcCeecCCCCCCC--CccceEEeeEEEEcCCC-hHh---hHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 467 88888899999876666 99999986555555443 223 336889999999999998 887644
No 184
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=86.32 E-value=0.23 Score=47.17 Aligned_cols=43 Identities=23% Similarity=0.603 Sum_probs=30.0
Q ss_pred CCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 705 VNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 705 ~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
+..|++|+.|...||..|.++.....+ .....+.|.|..|...
T Consensus 72 ~~~m~~C~~C~~~~H~~C~~~~~~~~~----~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 72 EKKLMECCICNEIVHPGCLQMDGEGLL----NEELPNCWECPKCYQE 114 (117)
T ss_dssp GGSCEEETTTCCEECGGGCCSCCCCEE----CSSSSSEEECTTTC--
T ss_pred CcceEEeeecCCeEECCCCCCCccccc----cccCCCCeECCCCcCC
Confidence 456999999999999999998543211 1123456999999754
No 185
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A*
Probab=85.30 E-value=0.96 Score=52.72 Aligned_cols=69 Identities=13% Similarity=0.137 Sum_probs=45.4
Q ss_pred CCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEE-EEeEEEEEEEeCCCchHHHHH
Q psy11602 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH-QFEKVEQFVLTSPHDDESWKM 95 (1083)
Q Consensus 17 ~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~r-EF~~~e~~~~~~~~~e~s~~~ 95 (1083)
.+.+++|.-..|.-+=-++. . -=|+|||++|||+|--..+ |.. ||+|.|.|....+. ++..+.
T Consensus 176 ~g~~~~L~~SpqLylq~l~~----g----~~rvfeIg~~FR~E~~~t~-------RH~~EFT~lE~e~af~d~-~d~m~~ 239 (435)
T 2xgt_A 176 FGEQSFLTQSSQLYLETCIP----T----LGDVFCIAQSYRAEKSRTR-------RHLAEYAHVEAECPFITL-DDLMEK 239 (435)
T ss_dssp TTEEEEECSCSHHHHHHHHH----H----HCSEEEEEEEECCCSSCCT-------TCCSEEEEEEEEEESCCH-HHHHHH
T ss_pred CCcccccCCChHHHHHHhhh----c----cCceEEEecceecCCCCcc-------ccccceeEEEEEEecCCH-HHHHHH
Confidence 45566777666633222211 1 1389999999999973222 334 99999999988765 667777
Q ss_pred HHHHHH
Q psy11602 96 LDEMIQ 101 (1083)
Q Consensus 96 ~~~~~~ 101 (1083)
.++|+.
T Consensus 240 ~E~li~ 245 (435)
T 2xgt_A 240 IEELVC 245 (435)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766663
No 186
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=84.53 E-value=0.13 Score=60.09 Aligned_cols=53 Identities=26% Similarity=0.629 Sum_probs=40.2
Q ss_pred CccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 691 ILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 691 ~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
....|+|..+. +++..||.||.|..=+|..|.|+...+.. ..+.|+|..|...
T Consensus 4 ~~~yCiC~~~~-d~~~~MIqCD~C~~WfH~~CVgi~~~~~~-------~~~~y~C~~C~~~ 56 (447)
T 3kv4_A 4 VPVYCLCRLPY-DVTRFMIECDMCQDWFHGSCVGVEEEKAA-------DIDLYHCPNCEVL 56 (447)
T ss_dssp CCEETTTTEEC-CTTSCEEECTTTCCEEEHHHHTCCHHHHT-------TEEECCCHHHHHH
T ss_pred CCeEEeCCCcC-CCCCCeEEcCCCCcccccccCCcCccccc-------CCCEEECCCCccc
Confidence 34778998653 34679999999999999999999764210 2367999999753
No 187
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A*
Probab=84.00 E-value=0.92 Score=52.69 Aligned_cols=73 Identities=10% Similarity=0.075 Sum_probs=31.7
Q ss_pred CCCCCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEE-EEeEEEEEEEeCCCchH
Q psy11602 13 PEKDELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVH-QFEKVEQFVLTSPHDDE 91 (1083)
Q Consensus 13 ~~dr~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~r-EF~~~e~~~~~~~~~e~ 91 (1083)
..|..+++++|.-+.|..+ .++.. - +-|+|+|+++||+|....+ |.. ||+|+|.+....++.++
T Consensus 165 ~~~~~g~~~~L~~Spel~~-~~l~~------g-~~rvf~ig~~FR~E~~~~~-------RH~pEFtqle~e~~~~~d~~d 229 (422)
T 1n9w_A 165 GVDYFEKRAYLAQSPQLYK-QIMVG------V-FERVYEVAPVWRMEEHHTS-------RHLNEYLSLDVEMGFIADEED 229 (422)
T ss_dssp --------------CHHHH-HHHHH------H-HSEEEEEEEC--------------------CCEEEEEEEESCSSHHH
T ss_pred EEeeCCCcEEeeeCHHHHH-HHHhh------C-CCceeEEeCceECCCCCCC-------cccceeEEeeeeeeCCCCHHH
Confidence 4456677889975556543 33221 1 3699999999999974333 555 99999999998844455
Q ss_pred HHHHHHHHH
Q psy11602 92 SWKMLDEMI 100 (1083)
Q Consensus 92 s~~~~~~~~ 100 (1083)
..+..++++
T Consensus 230 lm~l~e~ll 238 (422)
T 1n9w_A 230 LMRLEEALL 238 (422)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555554
No 188
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=83.84 E-value=0.22 Score=58.97 Aligned_cols=53 Identities=28% Similarity=0.646 Sum_probs=39.5
Q ss_pred CCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 690 KILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
....-|+|..+. +.+..||.||.|..=+|..|.|+...+.. ..+.|+|..|..
T Consensus 35 ~~~~yC~C~~~~-d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~-------~~~~~~C~~C~~ 87 (488)
T 3kv5_D 35 PPPVYCVCRQPY-DVNRFMIECDICKDWFHGSCVGVEEHHAV-------DIDLYHCPNCAV 87 (488)
T ss_dssp CCCEETTTTEEC-CTTSCEEEBTTTCCEEEHHHHTCCGGGGG-------GEEEBCCHHHHH
T ss_pred CCCeEEeCCCcC-CCCCCeEEccCCCCceeeeecCcCccccc-------CCCEEECCCCcC
Confidence 334556998653 23678999999999999999999765210 135799999985
No 189
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=83.54 E-value=0.47 Score=58.20 Aligned_cols=90 Identities=18% Similarity=0.200 Sum_probs=30.3
Q ss_pred eeeccccCCCCCCCCceeeccCCCCcccccchhh--hHHHHH-H-----hhhhcccceecccccCCCCCccccccCCCCC
Q psy11602 631 LVCCVCLGERSDDVNEIVECDSCGVTVHEVKIQQ--EFLAIK-F-----LIRYLLFWFQLEDFSKFSKILVCCVCLGERS 702 (1083)
Q Consensus 631 ~~c~~c~g~~~~~~~~l~~C~~Cg~~~h~~~~~~--~~~~i~-~-----~~~~~~~W~~~~d~~~~~~~~~C~VC~~~~~ 702 (1083)
.+|++|.+.--.-.+-=+.|..||...|..|..+ ..|.-. . .....-.|+. ..+.....|++|...-.
T Consensus 49 ~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~----~~~~~~~~C~~C~~~l~ 124 (674)
T 3pfq_A 49 TFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKI----HTYSSPTFCDHCGSLLY 124 (674)
T ss_dssp -----------------------------------------------------CCCCCE----ECCSSCCCCSSSCSCCB
T ss_pred CccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceee----cCCCCCCCCCccccccc
Confidence 4699996643333344688999999999999753 111100 0 0001112221 12345669999976433
Q ss_pred CCCCcEEEcccCCccccccccc
Q psy11602 703 DDVNEIVECDSCGVTVHEGCYG 724 (1083)
Q Consensus 703 ~~~n~iv~Cd~C~i~VH~~CYG 724 (1083)
.-..+-+.|..|++.||..|..
T Consensus 125 g~~~qg~~C~~C~~~~H~~C~~ 146 (674)
T 3pfq_A 125 GLIHQGMKCDTCMMNVHKRCVM 146 (674)
T ss_dssp BSSSCEECCSSSCCCBCSSTTS
T ss_pred hhhcCccccccCCcchhhhhhh
Confidence 3345889999999999999964
No 190
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens}
Probab=83.21 E-value=0.61 Score=55.58 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=49.5
Q ss_pred CCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHH
Q psy11602 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKM 95 (1083)
Q Consensus 16 r~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~ 95 (1083)
-.+.++||+-+.|.-+=-++..- + =|+|+|+++||+|- .+++ +.-||+|.|.|....+. ++..+.
T Consensus 221 ~~~~~~yL~~SpqL~lk~liv~g-~------~rVyeig~~FR~E~----~~tr---H~pEFtmlE~e~af~d~-~dlm~l 285 (521)
T 3bju_A 221 ELDMNLYMRIAPELYHKMLVVGG-I------DRVYEIGRQFRNEG----IDLT---HNPEFTTCEFYMAYADY-HDLMEI 285 (521)
T ss_dssp TTTEEEEECSCSHHHHHHHHHTT-C------CEEEEEEEEECCSC----CBTT---BCSEEEEEEEEEETCCH-HHHHHH
T ss_pred cCCcceEeeCCHHHHHHHHHhcC-c------CceEEEEcceeCCC----CCCc---cchhhhhhhhhhhcCCH-HHHHHH
Confidence 35678899988885543333221 1 27999999999997 3343 78899999999988754 566666
Q ss_pred HHHHH
Q psy11602 96 LDEMI 100 (1083)
Q Consensus 96 ~~~~~ 100 (1083)
.++|+
T Consensus 286 ~E~li 290 (521)
T 3bju_A 286 TEKMV 290 (521)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 191
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens}
Probab=83.11 E-value=0.77 Score=55.67 Aligned_cols=44 Identities=18% Similarity=0.413 Sum_probs=31.6
Q ss_pred eEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHH
Q psy11602 48 RYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEM 99 (1083)
Q Consensus 48 klyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~ 99 (1083)
++|||++|||+|... ++ |.-||+|+|.|....+. ++..+..++|
T Consensus 218 rvfqi~~~FR~E~~~----t~---r~pEFt~lE~e~af~d~-~d~m~~~E~l 261 (617)
T 4ah6_A 218 RYFQVARCYRDEGSR----PD---RQPEFTQIDIEMSFVDQ-TGIQSLIEGL 261 (617)
T ss_dssp EEEEEEEEECCCSSC----SS---SCSEEEEEEEEEESCCH-HHHHHHHHHH
T ss_pred cEEEEEhheecccCC----CC---cCcceecceeeecCCCH-HHHHHHHHHH
Confidence 899999999999732 22 56899999999987654 3333333333
No 192
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=82.81 E-value=0.57 Score=55.40 Aligned_cols=40 Identities=28% Similarity=0.556 Sum_probs=32.0
Q ss_pred CCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccC
Q psy11602 704 DVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRA 750 (1083)
Q Consensus 704 ~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~ 750 (1083)
++..||.||.|+-=+|..|-|+...... ..+.|+|..|..
T Consensus 54 ~~~~mI~CD~C~~WfH~~CVgi~~~~a~-------~~~~y~Cp~C~~ 93 (528)
T 3pur_A 54 NDFQWIGCDSCQTWYHFLCSGLEQFEYY-------LYEKFFCPKCVP 93 (528)
T ss_dssp STTSEEECTTTCCEEEGGGTTCCGGGTT-------TEEECCCTTTHH
T ss_pred cCCCEEECCCCCcCCCCcCCCCChhHhc-------CCCeEECcCCcC
Confidence 3458999999999999999999764211 246899999985
No 193
>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A*
Probab=82.33 E-value=0.91 Score=54.87 Aligned_cols=46 Identities=17% Similarity=0.389 Sum_probs=35.3
Q ss_pred eEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHHHH
Q psy11602 48 RYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQ 101 (1083)
Q Consensus 48 klyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~~~ 101 (1083)
|+|||++|||+|--... |.=||+|+|.|....+. ++..+..++|+.
T Consensus 208 rvfqI~~~FR~E~~~t~-------r~pEFT~lE~e~af~d~-~dvm~~~E~li~ 253 (585)
T 1c0a_A 208 RYYQIVKCFRDEDLRAD-------RQPEFTQIDVETSFMTA-PQVREVMEALVR 253 (585)
T ss_dssp EEEEEEEEECCCCCBTT-------BCSEEEEEEEEEESCCH-HHHHHHHHHHHH
T ss_pred ceEEEeceeecCCCCCC-------cCcccceeeeeecCCCH-HHHHHHHHHHHH
Confidence 89999999999984322 55599999999988765 566666666653
No 194
>1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A
Probab=82.24 E-value=0.9 Score=54.85 Aligned_cols=45 Identities=18% Similarity=0.403 Sum_probs=34.2
Q ss_pred eEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHHH
Q psy11602 48 RYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMI 100 (1083)
Q Consensus 48 klyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~~ 100 (1083)
|+|||++|||+|--... |.=||+|.|.|....+. ++..+..++|+
T Consensus 214 rvfqI~~~FR~E~~~~~-------r~pEFT~lE~e~af~d~-~dvm~~~E~li 258 (580)
T 1l0w_A 214 RYFQIARCFRDEDLRAD-------RQPDFTQLDLEMSFVEV-EDVLELNERLM 258 (580)
T ss_dssp EEEEEEEEECCCCCCSS-------CCSEEEEEEEEEESCCH-HHHHHHHHHHH
T ss_pred CeEEEeceeeCCCCCCC-------cCCCccceeeeecCCCH-HHHHHHHHHHH
Confidence 89999999999984221 55599999999988765 55555555555
No 195
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=82.21 E-value=0.25 Score=58.35 Aligned_cols=34 Identities=24% Similarity=0.581 Sum_probs=27.8
Q ss_pred ccccccccCCCC-CCcceecCccCCCccccCCCCC
Q psy11602 1037 SHKCGLCHLSHD-PHTMAKCDTCHLYYHLACLDPP 1070 (1083)
Q Consensus 1037 ~~~c~~C~~~~~-~~~~~~Cd~C~~~yH~~Cl~Pp 1070 (1083)
....|+|++..| ...|+.||.|+.|||..|+.-+
T Consensus 36 ~~~yC~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~ 70 (488)
T 3kv5_D 36 PPVYCVCRQPYDVNRFMIECDICKDWFHGSCVGVE 70 (488)
T ss_dssp CCEETTTTEECCTTSCEEEBTTTCCEEEHHHHTCC
T ss_pred CCeEEeCCCcCCCCCCeEEccCCCCceeeeecCcC
Confidence 334559999865 7889999999999999999643
No 196
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=80.33 E-value=0.46 Score=48.25 Aligned_cols=54 Identities=15% Similarity=0.359 Sum_probs=34.3
Q ss_pred CCcccccccccccCCCCCcceeecccccccccccCCCccceeeecccccccccccccccccccCCCCCCcccccc
Q psy11602 543 SEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLH 617 (1083)
Q Consensus 543 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~c~~~~H~~ca~~~g~~~e~~~~~~~~~~p~~~~c~~h 617 (1083)
.+..+| +|++.+- ++..+ ++|| .|..|||..|.. +++... ......+++.|+..
T Consensus 6 ~~~~~C-~C~~~~~--~~~~m----------i~Cd--~C~~WfH~~Cv~----~~~~~~--~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPED--ESKFY----------IGCD--RCQNWYHGRCVG----ILQSEA--ELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECC--TTSCE----------EECT--TTCCEEEHHHHT----CCHHHH--TTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCC--CCCCE----------eECC--CCCchhChhhcC----Cchhhc--cCccCeecCCCcch
Confidence 344599 9997652 34556 7999 899999999974 222211 12345666677643
No 197
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A*
Probab=80.17 E-value=2.2 Score=49.68 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=49.4
Q ss_pred CCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHH
Q psy11602 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKM 95 (1083)
Q Consensus 16 r~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~ 95 (1083)
-.+.+++|.-+.|..+=-++.. . --|+|+|++|||+|....+| ..-||+|.|.|....+..++..+.
T Consensus 180 ~~~~~~yL~~Spql~~q~l~~~---g----~~rvf~i~~~FR~E~~~t~R------H~pEFt~le~e~a~~~~~~d~m~~ 246 (438)
T 3nem_A 180 YFEEDAFLAQSPQLYKQIMMAS---G----LDRVYEIAPIFRAEEHNTTR------HLNEAWSIDSEMAFIEDEEEVMSF 246 (438)
T ss_dssp ETTEEEEECSCSHHHHHHGGGT---T----CCEEEEEEEEECCCSSCCTT------CCSEEEEEEEEEESCSSHHHHHHH
T ss_pred eCCccEEEecChHHHHHHHHhc---C----CCceEEEcceEECCCCCCcc------cccceeeeeeeeccCccHHHHHHH
Confidence 3456788987777544333211 1 23999999999999742221 234999999999988844667776
Q ss_pred HHHHHH
Q psy11602 96 LDEMIQ 101 (1083)
Q Consensus 96 ~~~~~~ 101 (1083)
.++|+.
T Consensus 247 ~E~li~ 252 (438)
T 3nem_A 247 LERLVA 252 (438)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666663
No 198
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis}
Probab=79.63 E-value=0.97 Score=53.88 Aligned_cols=69 Identities=14% Similarity=0.072 Sum_probs=47.7
Q ss_pred CCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHH
Q psy11602 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKML 96 (1083)
Q Consensus 17 ~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~ 96 (1083)
.+.++||.-..|.-+=-++..- -=|+|+|+++||+|--. + -+.-||+|.|.|....+. ++..+..
T Consensus 250 ~~~~~yL~~SpqLylk~L~v~G-------~~rVyeIg~~FR~E~~~----~---rH~pEFtmlE~e~af~d~-~dlm~l~ 314 (529)
T 4ex5_A 250 LDMEMFLRIAPELYLKRLIVGG-------FERVFEINRNFRNEGVS----P---RHNPEFTMMEFYAAYTDY-RWLMDFT 314 (529)
T ss_dssp TTEEEEECSCSHHHHHHHHHTT-------CSEEEEEEEEECCSCCB----T---TBCSEEEEEEEEEETCCH-HHHHHHH
T ss_pred CCcceecccCHHHHHHHHHhcC-------CCcEEEeehheecCCCC----C---CcccHhHhhhhhhhcCCH-HHHHHHH
Confidence 4567888877775543333211 13899999999999732 2 378899999999987754 5666666
Q ss_pred HHHH
Q psy11602 97 DEMI 100 (1083)
Q Consensus 97 ~~~~ 100 (1083)
++|+
T Consensus 315 E~li 318 (529)
T 4ex5_A 315 ERLI 318 (529)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6555
No 199
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=78.72 E-value=17 Score=43.88 Aligned_cols=145 Identities=11% Similarity=0.182 Sum_probs=88.8
Q ss_pred eeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHHH
Q psy11602 21 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMI 100 (1083)
Q Consensus 21 ~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~~ 100 (1083)
.+|+++-=-.+....+. .......|++++.++.+||.+.. .+.. ...||.+++......+- .|..+.
T Consensus 200 sVLRTsLlPGLL~~vr~-N~~R~~~pvRLFEIGrVFR~D~~---lDat---h~~Ef~qLeGlv~G~~v------dF~DLK 266 (648)
T 2odr_B 200 LTLRSHMTSGWFLTVSD-LMNKKPLPFKLFSIDRCFRREQK---EDKS---HLMTYHSASCAIAGEGV------DINDGK 266 (648)
T ss_dssp EEECCCTHHHHHHHHHH-HTTTSCSCEEEEEEEEEECCCSC---CCSS---CCSEEEEEEEEEECTTC------CHHHHH
T ss_pred CcccccchhhHHHHHHH-HHhcCCCCeEEEEEeeEEecCcc---cccc---CCCcceEEEEEEECCCC------CHHHHH
Confidence 45665543333333332 23456889999999999997541 0111 22799999999887644 467888
Q ss_pred HHHHHHHHHcCCc-eEEEEec--cCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCccccccc
Q psy11602 101 QNSEEFYADLGIA-YRVVNIV--SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC 177 (1083)
Q Consensus 101 ~~y~~if~~LgLp-yrvv~~~--sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~~n~tg~ 177 (1083)
...+.|++.||+. ++..... ...+.++-+ ..|.+..|+..+|.+|+.|--.---..+.++|. ..+...++
T Consensus 267 GvLE~LL~~LGi~~vrfrpse~~~p~yhPGre--AEI~v~~~g~~GW~EIG~~GeVHP~VLk~~GId-----~~V~AFEL 339 (648)
T 2odr_B 267 AIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQ--TEVYAYHPKLKEWLEVATFGVYSPVALSKYGID-----VPVMNLGL 339 (648)
T ss_dssp HHHHHHHHTTTCCCEEEEECTTCCTTBCTTCC--EEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCC-----SCEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEECCCCCcCcCCceE--EEEEEecCCCCCCEEEEEEeEECHHHHHHcCCC-----CCEEEEEE
Confidence 9999999999984 6555431 112555444 333333443336788888665544556666662 22556677
Q ss_pred cchhheeh
Q psy11602 178 ATTRVICA 185 (1083)
Q Consensus 178 a~~Rli~A 185 (1083)
...|++..
T Consensus 340 gLErLaml 347 (648)
T 2odr_B 340 GVERLAMI 347 (648)
T ss_dssp EHHHHHHH
T ss_pred eHHHHHHH
Confidence 77777643
No 200
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=78.50 E-value=18 Score=43.87 Aligned_cols=145 Identities=11% Similarity=0.182 Sum_probs=88.8
Q ss_pred eeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHHH
Q psy11602 21 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMI 100 (1083)
Q Consensus 21 ~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~~ 100 (1083)
.+|+++-=-.+....+. .......|++++.++.+||.+.. .+.. ...||.+++......+- .|..+.
T Consensus 200 sVLRTSLlPGLL~~lr~-N~~R~~~pvRLFEIGrVFR~D~~---lDat---h~~Ef~qLeGlv~G~~v------dF~DLK 266 (665)
T 2odr_A 200 LTLRSHMTSGWFLTVSD-LMNKKPLPFKLFSIDRCFRREQK---EDKS---HLMTYHSASCAIAGEGV------DINDGK 266 (665)
T ss_dssp EEECCCTHHHHHHHHHH-HTTTSCSCEEEEEEEEEECCCSC---CCSS---CCSEEEEEEEEEECTTC------CHHHHH
T ss_pred CcccccchhhHHHHHHH-HHhcCCCCeEEEEEeeEEecCcc---cccc---CCCcceEEEEEEECCCC------CHHHHH
Confidence 45665543333333332 23456889999999999997541 0111 22799999999887644 467888
Q ss_pred HHHHHHHHHcCCc-eEEEEec--cCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCccccccc
Q psy11602 101 QNSEEFYADLGIA-YRVVNIV--SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC 177 (1083)
Q Consensus 101 ~~y~~if~~LgLp-yrvv~~~--sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~~n~tg~ 177 (1083)
...+.|++.||+. ++..... ...+.++-+ ..|.+..|+..+|.+|+.|--.---..+.++|. ..+...++
T Consensus 267 GvLE~LL~~LGi~~vrfrpse~~~p~yhPGre--AEI~V~~~g~~GW~EIG~~GeVHPeVLk~~GId-----~~V~AFEL 339 (665)
T 2odr_A 267 AIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQ--TEVYAYHPKLKEWLEVATFGVYSPVALSKYGID-----VPVMNLGL 339 (665)
T ss_dssp HHHHHHHHTTTCCCEEEEECTTCCTTBCTTCC--EEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCC-----SCEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEECCCCCCCcCCceE--EEEEEecCCCCCCEEEEEEeEECHHHHHHcCCC-----CCEEEEEE
Confidence 9999999999984 6655431 112555444 333333443336788888665544556666662 22556677
Q ss_pred cchhheeh
Q psy11602 178 ATTRVICA 185 (1083)
Q Consensus 178 a~~Rli~A 185 (1083)
...|++..
T Consensus 340 gLErLaml 347 (665)
T 2odr_A 340 GVERLAMI 347 (665)
T ss_dssp EHHHHHHH
T ss_pred eHHHHHHH
Confidence 77777643
No 201
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=78.19 E-value=18 Score=43.85 Aligned_cols=144 Identities=11% Similarity=0.185 Sum_probs=87.7
Q ss_pred eeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHHH
Q psy11602 21 KYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMI 100 (1083)
Q Consensus 21 ~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~~ 100 (1083)
.+|+++-=-.+....+. .......|++++.++.+||.+.. .+.. ...||.+++......+- .|..+.
T Consensus 200 sVLRTSLlPGLL~~vr~-N~~R~~~pvRLFEIGrVFR~D~~---lDat---h~~Ef~qLeGlv~G~~v------DF~DLK 266 (685)
T 2odr_D 200 LTLRSHMTSGWFLTVSD-LMNKKPLPFKLFSIDRCFRREQK---EDKS---HLMTYHSASCAIAGEGV------DINDGK 266 (685)
T ss_dssp EEECCCTHHHHHHHHHH-HTTTSCSCEEEEEEEEEECCCSC---CCSS---CCSEEEEEEEEEECTTC------CHHHHH
T ss_pred CcccccchhhHHHHHHH-HHhCCCCCeEEEEeccEEecCcc---cccc---CCCcceEEEEEEECCCC------CHHHHH
Confidence 45665543333333332 23456889999999999997541 0111 22799999999887644 467888
Q ss_pred HHHHHHHHHcCCc-eEEEEec--cCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCccccccc
Q psy11602 101 QNSEEFYADLGIA-YRVVNIV--SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATAC 177 (1083)
Q Consensus 101 ~~y~~if~~LgLp-yrvv~~~--sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~~n~tg~ 177 (1083)
...+.|++.||+. ++..... ...+.++-+ ..|.+..|+..+|.+|+.|--.---..+.++|. ..+...++
T Consensus 267 GvLE~LL~~LGi~~vrfrpse~~~p~yHPGre--AEI~V~~~g~~GW~EIG~~GeVHPeVLk~~GId-----~~V~AFEL 339 (685)
T 2odr_D 267 AIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQ--TEVYAYHPKLKEWLEVATFGVYSPVALSKYGID-----VPVMNLGL 339 (685)
T ss_dssp HHHHHHHHTTTCCCEEEEECTTCCTTBCTTCC--EEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCC-----SCEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEECCCCCCCcCCceE--EEEEEecCCCCCCEEEEEEeEECHHHHHHcCCC-----CCEEEEEE
Confidence 9999999999984 6555431 112555444 333333343336788888665544455666662 22456667
Q ss_pred cchhhee
Q psy11602 178 ATTRVIC 184 (1083)
Q Consensus 178 a~~Rli~ 184 (1083)
...|++.
T Consensus 340 gLErLam 346 (685)
T 2odr_D 340 GVERLAM 346 (685)
T ss_dssp EHHHHHH
T ss_pred eHHHHHH
Confidence 7777654
No 202
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A*
Probab=75.09 E-value=2.5 Score=46.37 Aligned_cols=57 Identities=16% Similarity=0.321 Sum_probs=43.2
Q ss_pred hhhcccccccccccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCcEEEE
Q psy11602 290 EMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVV 354 (1083)
Q Consensus 290 ~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lpyRvv 354 (1083)
+++....|||....+. -|.+||++++...+-... .|.++...++.+++.|||+|++.
T Consensus 157 rlfeiG~vFR~E~~~~--~~~~Ef~ql~~~~~g~~~------~f~elkg~le~ll~~lGl~~~~~ 213 (290)
T 3qtc_A 157 KIFEIGPCYRKESDGK--EHLEEFTMLVFWQMGSGC------TRENLESIITDFLNHLGIDFKIV 213 (290)
T ss_dssp EEEEEEEEECCCSCSS--SCCSEEEEEEEEEESTTC------CHHHHHHHHHHHHHHHTCCCEEE
T ss_pred EEEEEcCEEecCCCCC--cCcchheEEEEEEEcCCh------HHHHHHHHHHHHHHHcCCCcEEe
Confidence 4556666887754333 368899999987766442 27789999999999999999875
No 203
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=75.02 E-value=20 Score=43.60 Aligned_cols=144 Identities=11% Similarity=0.188 Sum_probs=87.5
Q ss_pred eEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHHHH
Q psy11602 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQ 101 (1083)
Q Consensus 22 ~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~~~ 101 (1083)
+|+++-=-.+....+. .......|++++.++.+||.+.. .+.. ...||.+++......+- .|..+..
T Consensus 201 VLRTSLlPGLL~~vr~-N~~R~~~pvRLFEIGrVFR~D~~---lDat---h~~EfhqLeGlv~G~~v------DF~DLKG 267 (701)
T 2odr_C 201 TLRSHMTSGWFLTVSD-LMNKKPLPFKLFSIDRCFRREQK---EDKS---HLMTYHSASCAIAGEGV------DINDGKA 267 (701)
T ss_dssp EECCCTHHHHHHHHHH-HTTTSCSCEEEEEEEEEECCCSC---CCSS---CCSEEEEEEEEEECTTC------CHHHHHH
T ss_pred cccccchhhHHHHHHH-HHhCCCCCeEEEEEeeEEccCcc---cccc---CCCcceEEEEEEECCCC------CHHHHHH
Confidence 5555433323333322 23456889999999999997541 0111 22799999999887644 4678889
Q ss_pred HHHHHHHHcCCc-eEEEEec--cCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCcccccccc
Q psy11602 102 NSEEFYADLGIA-YRVVNIV--SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACA 178 (1083)
Q Consensus 102 ~y~~if~~LgLp-yrvv~~~--sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~~n~tg~a 178 (1083)
..+.|++.||+. ++..... ...+.++-+ ..|.+..|+..+|.+|+.|--.---..+.++|. ..+-..++.
T Consensus 268 vLE~LL~~LGi~~vrfrpse~~~p~yHPGre--AEI~V~~~g~~GW~EIG~~GeVHPeVLk~~GId-----~~V~AFELg 340 (701)
T 2odr_C 268 IAEGLLSQFGFTNFKFIPDEKKSKYYTPETQ--TEVYAYHPKLKEWLEVATFGVYSPVALSKYGID-----VPVMNLGLG 340 (701)
T ss_dssp HHHHHHHTTTCCCEEEEECTTCCTTBCTTCC--EEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCC-----SCEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEECCCCCCCcCCceE--EEEEEecCCCCCCEEEEEEeEECHHHHHHcCCC-----CCEEEEEEe
Confidence 999999999984 6555431 112555444 333333343336788888665544456666662 224566777
Q ss_pred chhheeh
Q psy11602 179 TTRVICA 185 (1083)
Q Consensus 179 ~~Rli~A 185 (1083)
..|++..
T Consensus 341 LErLaml 347 (701)
T 2odr_C 341 VERLAMI 347 (701)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777643
No 204
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii}
Probab=74.58 E-value=17 Score=43.32 Aligned_cols=144 Identities=13% Similarity=0.216 Sum_probs=86.3
Q ss_pred eEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHHHHHHH
Q psy11602 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQ 101 (1083)
Q Consensus 22 ~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~~~~~~ 101 (1083)
+|+++-=-.+....+. .......|++++.++.+||.+.. .+.. +.+||.+++...+..+- .|..+..
T Consensus 194 vLRTsLlPGLL~~vr~-N~~r~~~pvrlFEiGrVFr~D~~---~d~t---h~~ef~qLaglv~G~~v------dF~DLKG 260 (549)
T 2du7_A 194 TLRSHMTSGWFITLSS-LIKKRKLPLKLFSIDRCFRREQR---EDRS---HLMSYHSASCVVVGEDV------SVDDGKV 260 (549)
T ss_dssp ECCSTTHHHHHHHHHT-TTTTSCSSEEEEEEEEECCCCSS---CSSS---CCSCEEEEEEEEECTTC------CHHHHHH
T ss_pred ccccccchhHHHHHHH-HHhcCCCCeEEEEEeeEEecCCc---ccCc---CCCcceEEEEEEECCCC------CHHHHHH
Confidence 4555433333333332 23456899999999999996541 0111 33799999998888643 4778889
Q ss_pred HHHHHHHHcCCc-eEEEEec--cCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccCCCcccccccc
Q psy11602 102 NSEEFYADLGIA-YRVVNIV--SGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKQKIYATACA 178 (1083)
Q Consensus 102 ~y~~if~~LgLp-yrvv~~~--sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~~~~~n~tg~a 178 (1083)
..+.|++.||++ ++..... ...+.++-+ ..|.+..++..+|.+|+.|--.---..+.++|. ..+...++.
T Consensus 261 ~Le~ll~~LGi~~~rfrps~~~~p~yhPGr~--AeI~v~~~g~~gw~eIG~~GeVHP~VLk~~gId-----~~v~aFELg 333 (549)
T 2du7_A 261 VAEGLLAQFGFTKFKFKPDEKKSKYYTPETQ--TEVYAYHPKLGEWIEVATFGVYSPIALAKYNID-----VPVMNLGLG 333 (549)
T ss_dssp HHHHHHGGGTCCCCCCEECTTCCTTBCTTTC--EEEEECCSSSSCSEEEEEEEEBCHHHHHHTTCC-----SCEEEEEEB
T ss_pred HHHHHHHHcCCCeEEEEECCCCCcccCCceE--EEEEEecCCCCCcEEEEEEEEECHHHHHHcCCC-----CCeEEEEEe
Confidence 999999999983 5444321 112455444 233332233236778888654444445566662 225566777
Q ss_pred chhheeh
Q psy11602 179 TTRVICA 185 (1083)
Q Consensus 179 ~~Rli~A 185 (1083)
..|++..
T Consensus 334 LErL~m~ 340 (549)
T 2du7_A 334 VERLAMI 340 (549)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777643
No 205
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A
Probab=72.57 E-value=4.6 Score=47.30 Aligned_cols=70 Identities=16% Similarity=0.206 Sum_probs=45.7
Q ss_pred CCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHHH
Q psy11602 17 ELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKML 96 (1083)
Q Consensus 17 ~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~~ 96 (1083)
.+.+++|.-+.|.-+=-++. .+ =++|+|+++||+|.-...| ..-||+|.|.|....+. ++..+..
T Consensus 200 ~~~~~~L~~SpqL~lq~l~~-------g~-~rVyeig~~FR~E~~~t~r------H~pEFtmlE~e~af~d~-~d~m~~~ 264 (456)
T 3m4p_A 200 FNEPAYLTQSSQLYLESVIA-------SL-GKSFCMLSSYRAEQSRTVR------HLAEYLHLEAELPFISF-EDLLNHL 264 (456)
T ss_dssp TTEEEEECSCCHHHHHTTHH-------HH-SSEEEEEEEECCCSCCCSS------CCSEEEEEEEEEESCCH-HHHHHHH
T ss_pred cCCCcccccCHHHHHHHHHh-------cc-CcEEEEEhheecCCCCCCc------chHHHHHhHHHHhcCCH-HHHHHHH
Confidence 35567887777644322221 12 3799999999999621111 23499999999988865 6676666
Q ss_pred HHHHH
Q psy11602 97 DEMIQ 101 (1083)
Q Consensus 97 ~~~~~ 101 (1083)
++++.
T Consensus 265 E~li~ 269 (456)
T 3m4p_A 265 EDLVC 269 (456)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 206
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=71.04 E-value=3.6 Score=47.30 Aligned_cols=65 Identities=17% Similarity=0.186 Sum_probs=48.0
Q ss_pred hhhhh-hhhcccccccccccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCC--cEEEEe
Q psy11602 285 WKMLD-EMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGI--AYRVVN 355 (1083)
Q Consensus 285 ~~~~~-~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~l--pyRvv~ 355 (1083)
++++| ++++...+||+.+...| |.+||...-.-.|..++ ..+ -.|++..+.++|+.||| .|+++.
T Consensus 97 ~~~~P~rl~~~g~vfR~e~p~~g--R~Ref~Q~d~e~~g~~~-~~a---d~e~i~~~~~~l~~lgl~~~~~i~i 164 (423)
T 1htt_A 97 LYNQEQRLWYIGPMFRHERPQKG--RYRQFHQLGCEVFGLQG-PDI---DAELIMLTARWWRALGISEHVTLEL 164 (423)
T ss_dssp STTCCEEEEEEEEEECCCCCCSS--CCSEEEEEEEEEESCCS-HHH---HHHHHHHHHHHHHHHTCGGGCEEEE
T ss_pred ccCCCeEEEEEcCEecCCCCCCC--ccceeEEeeEEEECCCC-chh---hHHHHHHHHHHHHHCCCCCCcEEEE
Confidence 34567 88888889999876666 99999886555555553 233 33678999999999999 488764
No 207
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=68.25 E-value=2.7 Score=33.45 Aligned_cols=37 Identities=24% Similarity=0.467 Sum_probs=28.7
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|++|...--.-..+-+.|..|++.+|..|...
T Consensus 9 ~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 9 MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 3456899998644333568999999999999999653
No 208
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=66.20 E-value=2.3 Score=42.61 Aligned_cols=51 Identities=22% Similarity=0.557 Sum_probs=39.8
Q ss_pred CCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 690 KILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
....|.+|..+-.--.|.-..|..|...|=..|- +... ++..|+|..|...
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~-~~~~----------~~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS-HAHP----------EEQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE-ECCS----------SSSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc-cccC----------CCCcEeeHHHHHH
Confidence 4679999997644457888999999999999994 3322 4678999999654
No 209
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=65.75 E-value=3.4 Score=36.35 Aligned_cols=38 Identities=21% Similarity=0.480 Sum_probs=29.5
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
+.....|++|...--.-..+-+.|..|++.||..|...
T Consensus 31 f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 31 FPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp CSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCCCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 34566999998643333568899999999999999764
No 210
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A*
Probab=65.19 E-value=5.8 Score=44.62 Aligned_cols=62 Identities=13% Similarity=0.098 Sum_probs=40.3
Q ss_pred hhh-hhhcccccccccccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCc-EEEE
Q psy11602 287 MLD-EMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIA-YRVV 354 (1083)
Q Consensus 287 ~~~-~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lp-yRvv 354 (1083)
.+| +++....+||+.+...| |.+||..+..-.|..++ ..++ .|++..+.++|+.|||+ |++.
T Consensus 115 ~~P~rl~y~g~vfR~e~p~~g--R~REF~Q~g~ei~g~~~-~~aD---aEvi~l~~~~l~~lgl~~~~i~ 178 (344)
T 1z7m_A 115 STSARYSYFGKIFRKEKRHKG--RSTENYQIGIELFGESA-DKSE---LEILSLALQVIEQLGLNKTVFE 178 (344)
T ss_dssp CCCEEEEEEEECCCCCC---------CCEEEEEEEESSCH-HHHH---HHHHHHHHHHHHHHTCSSEEEE
T ss_pred CCCeEEEEECcEEccCCCCCC--CcceeEEEEEEEEcCCC-cHHH---HHHHHHHHHHHHHCCCCcEEEE
Confidence 345 67777778888766555 99999987666666553 2232 47999999999999997 7654
No 211
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.67 E-value=5.3 Score=35.58 Aligned_cols=37 Identities=19% Similarity=0.432 Sum_probs=29.1
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|++|...--.-..+-+.|..|++.||..|...
T Consensus 26 ~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 26 GQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp SSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CCCcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 4456999998653333568899999999999999764
No 212
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=63.30 E-value=4.6 Score=34.22 Aligned_cols=37 Identities=24% Similarity=0.457 Sum_probs=28.7
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|++|...--.-..+-+.|..|++.||..|...
T Consensus 21 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 21 KSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CCCcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 3456999998643333568899999999999999754
No 213
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=61.24 E-value=5.2 Score=34.02 Aligned_cols=37 Identities=27% Similarity=0.560 Sum_probs=28.9
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|++|...--.-..+-+.|..|++.+|..|...
T Consensus 22 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 22 TTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp SSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHH
T ss_pred CCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhh
Confidence 3456999998654333468899999999999999764
No 214
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=61.02 E-value=4.3 Score=34.35 Aligned_cols=37 Identities=24% Similarity=0.467 Sum_probs=28.4
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|++|...--.-..+-+.|..|++.+|..|...
T Consensus 18 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 18 MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCCcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 3456999998643333468899999999999999754
No 215
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica}
Probab=60.79 E-value=6.5 Score=47.03 Aligned_cols=72 Identities=13% Similarity=0.107 Sum_probs=42.2
Q ss_pred CCCCCeeEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHHH
Q psy11602 16 DELDDKYLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWKM 95 (1083)
Q Consensus 16 r~~~~~~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~~ 95 (1083)
-.+.++||.-+.|.-+--++.. . -=++|+|+++||+|..... -..-||+|.|.|.......++..+.
T Consensus 287 ~~~~~~yL~~Spql~~k~ll~~------g-~~rVfeI~~~FR~E~~~t~------RHl~EFtmlE~e~af~~d~~d~m~~ 353 (548)
T 3i7f_A 287 YFDRKAYLAQSPQLYKQMAIMG------D-FRKVFEVGPVFRAENSNTR------RHLTEFEGLDIEMEIVENYHECIDV 353 (548)
T ss_dssp -----CCBCSCTHHHHHHHHTT------T-CCEEEEEEEECCCSCCCSS------SCCSCEEEEEEEEECSSCTHHHHHH
T ss_pred cCCCceEeccCHHHHHHHHHhc------C-cCcEEEEeeeEecCCCCCC------CcchhhhchhhhhhhhcCHHHHHHH
Confidence 3455678777777444333321 1 1489999999999983111 1245999999997544322556666
Q ss_pred HHHHH
Q psy11602 96 LDEMI 100 (1083)
Q Consensus 96 ~~~~~ 100 (1083)
.++|+
T Consensus 354 ~E~li 358 (548)
T 3i7f_A 354 MEKLF 358 (548)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66665
No 216
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=59.88 E-value=6.1 Score=38.63 Aligned_cols=55 Identities=18% Similarity=0.395 Sum_probs=41.1
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.....|.+|...-.--.|.=..|..|...|=+.|-+..... .....|+|..|...
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~--------~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNN--------RPHPVWLCKICLEQ 107 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCS--------SSSCCEEEHHHHHH
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCC--------CCccceechhhHHH
Confidence 45679999997664456777999999999999995543221 14567999999653
No 217
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.57 E-value=7.2 Score=34.92 Aligned_cols=37 Identities=22% Similarity=0.440 Sum_probs=28.8
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|++|...--.-..+-+.|..|++.||..|...
T Consensus 26 ~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 26 GSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CCCcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 3456999998644333568899999999999999764
No 218
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=56.62 E-value=5.4 Score=31.98 Aligned_cols=33 Identities=27% Similarity=0.566 Sum_probs=26.5
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|++|... .. +-+.|..|++.||..|...
T Consensus 12 ~~pt~C~~C~~~-l~---qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 12 LKLAFCDICQKF-LL---NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp SSCEECTTSSSE-EC---SEEECTTTTCCBCSTTSSS
T ss_pred CCCcCCCCcccc-cc---cCCEeCCCCCeEChhHHhh
Confidence 345699999753 22 8899999999999999764
No 219
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=56.33 E-value=4.9 Score=33.90 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=27.6
Q ss_pred CCccccccCCCCCCCCCcEEEcccCCccccccccccc
Q psy11602 690 KILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQ 726 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~ 726 (1083)
....|++|... -.-..+.+.|.+|++.+|..|-...
T Consensus 18 ~~~~C~~Cg~~-i~~gkq~~kC~dC~~~cH~~C~~~~ 53 (61)
T 4b6d_A 18 KPESCVPCGKR-IKFGKLSLKCRDCRVVSHPECRDRC 53 (61)
T ss_dssp SCEECTTTCCE-ECTTCEEEEESSSSCEECGGGGGGS
T ss_pred CCcccccccCE-EEEeeEeeECCCCCCeEchhHhhcC
Confidence 34599999643 2345689999999999999996543
No 220
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=54.88 E-value=10 Score=34.18 Aligned_cols=36 Identities=22% Similarity=0.747 Sum_probs=28.9
Q ss_pred CCcEEEcccCC-cccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 705 VNEIVECDSCG-VTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 705 ~n~iv~Cd~C~-i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.-+||.|..|+ .++|..|..+.. ....|.|..|...
T Consensus 43 ~W~L~lC~~Cgs~gtH~~Cs~l~~-----------~~~~weC~~C~~v 79 (85)
T 1weq_A 43 RWRLILCATCGSHGTHRDCSSLRP-----------NSKKWECNECLPA 79 (85)
T ss_dssp TTBCEECSSSCCCEECSGGGTCCT-----------TCSCCCCTTTSCC
T ss_pred CEEEEeCcccCCchhHHHHhCCcC-----------CCCCEECCcCccc
Confidence 46999999998 579999987643 3568999999853
No 221
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=52.62 E-value=2.7 Score=49.00 Aligned_cols=54 Identities=24% Similarity=0.548 Sum_probs=35.3
Q ss_pred CcccccccccccCCCCCcceeecccccccccccCCCccceeeecccccccccccccccccccCCCCCCccccccc
Q psy11602 544 EQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHA 618 (1083)
Q Consensus 544 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~c~~~~H~~ca~~~g~~~e~~~~~~~~~~p~~~~c~~h~ 618 (1083)
..-|| +|++.+ .++..+ |+|| .|+.|||..|.. |+++... ....++|+.|....
T Consensus 4 ~~~yC-iC~~~~--d~~~~M----------IqCD--~C~~WfH~~CVg----i~~~~~~--~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 4 VPVYC-LCRLPY--DVTRFM----------IECD--MCQDWFHGSCVG----VEEEKAA--DIDLYHCPNCEVLH 57 (447)
T ss_dssp CCEET-TTTEEC--CTTSCE----------EECT--TTCCEEEHHHHT----CCHHHHT--TEEECCCHHHHHHH
T ss_pred CCeEE-eCCCcC--CCCCCe----------EEcC--CCCcccccccCC----cCccccc--CCCEEECCCCcccc
Confidence 34477 899766 234455 6999 899999999975 4333221 22357788887543
No 222
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=52.28 E-value=12 Score=42.43 Aligned_cols=65 Identities=11% Similarity=-0.012 Sum_probs=40.5
Q ss_pred hhh-hhhcccccccccccCc----CceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCC-cEEEE
Q psy11602 287 MLD-EMIQNSEEFYADLDTR----GIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGI-AYRVV 354 (1083)
Q Consensus 287 ~~~-~~~~~~~~~~~~~~tr----Gl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~l-pyRvv 354 (1083)
.+| +++....+||+.+.-. +.-|.+||..+-.-.|..++...++ .|++..+.++|+.||| .|+|.
T Consensus 115 ~~P~r~~y~g~vfR~e~~g~~~~~~~gR~ReF~Q~g~ei~g~~d~~~aD---aEvi~l~~~~l~~lgl~~~~i~ 185 (373)
T 3rac_A 115 RTPIRWCYCERVYRRTDDPASLSWASGKAAESTQVGIERIGEEASVDVD---MDVLRLLHEASAAAGVRHHRIV 185 (373)
T ss_dssp CCCCEEEEEEEEEECC------------CEEEEEEEEEECSSCCCHHHH---HHHHHHHHHHHHHHTCCSCEEE
T ss_pred CCCeEEEEEcceEccCCCcccccccCCccceeEEeeeEEECCCCCHHHH---HHHHHHHHHHHHHcCCCceEEE
Confidence 344 6667777888765510 3449999998665555655323333 4799999999999999 46554
No 223
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=50.79 E-value=9 Score=33.30 Aligned_cols=34 Identities=24% Similarity=0.541 Sum_probs=27.5
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|+.|.+.- ..+-+.|..|++.+|..|...
T Consensus 33 ~~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 33 GGPGWCDLCGREV---LRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SSCCBCTTTSSBC---SSCCEECTTSSCEECTGGGGG
T ss_pred CCCcchhhhhHHH---HhCcCccCCCCCeechhhhcc
Confidence 3456899998643 568899999999999999754
No 224
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.28 E-value=3.7 Score=35.14 Aligned_cols=52 Identities=17% Similarity=0.144 Sum_probs=37.3
Q ss_pred ccCCCCCCCCc----eeeccCCC---CcccccchhhhHHHHHHhhhhcccceecccccCC
Q psy11602 636 CLGERSDDVNE----IVECDSCG---VTVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKF 688 (1083)
Q Consensus 636 c~g~~~~~~~~----l~~C~~Cg---~~~h~~~~~~~~~~i~~~~~~~~~W~~~~d~~~~ 688 (1083)
|.|...+.+.. |...++|= -++..+...++.|.|.|++.+ ++|+.|+|+++.
T Consensus 2 ~~g~~~~~f~eGqdVLarWsDGlfYlGtV~kV~~~~~~ClV~FeD~s-~~wv~~kdi~~~ 60 (68)
T 2e5p_A 2 SSGSSGPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDS-QFLVLWKDISPA 60 (68)
T ss_dssp CCCCCCCCCCTTCEEEEECTTSSEEEEEEEEEETTTTEEEEEETTTE-EEEEETTTEECC
T ss_pred CCCCCCcccccCCEEEEEecCCcEEEeEEEEEecCCcEEEEEEccCC-eeeeeeeccccc
Confidence 44555555555 66677753 244556666899999999888 899999999764
No 225
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=47.77 E-value=7.6 Score=45.96 Aligned_cols=45 Identities=22% Similarity=0.469 Sum_probs=32.5
Q ss_pred CCCCCcceeecccccccccccCCCccceeeecccccccccccccccccccCCCCCCccccccc
Q psy11602 556 LPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCRLHA 618 (1083)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~c~~~~c~~~~H~~ca~~~g~~~e~~~~~~~~~~p~~~~c~~h~ 618 (1083)
.+.++..+ |+|| .|.-|||..|-. |+++..+ ....++|+.|....
T Consensus 51 ~~n~~~~m----------I~CD--~C~~WfH~~CVg----i~~~~a~--~~~~y~Cp~C~~~~ 95 (528)
T 3pur_A 51 HKKNDFQW----------IGCD--SCQTWYHFLCSG----LEQFEYY--LYEKFFCPKCVPHT 95 (528)
T ss_dssp TTTSTTSE----------EECT--TTCCEEEGGGTT----CCGGGTT--TEEECCCTTTHHHH
T ss_pred CCCcCCCE----------EECC--CCCcCCCCcCCC----CChhHhc--CCCeEECcCCcCCC
Confidence 36777788 8999 899999999976 4444332 23468888998643
No 226
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=47.26 E-value=12 Score=29.64 Aligned_cols=35 Identities=31% Similarity=0.544 Sum_probs=25.9
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYG 724 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYG 724 (1083)
++...|.||++.-. +++..+....|+..+|..|..
T Consensus 3 ~~~~~C~IC~~~~~-~~~~~~~~~~C~H~f~~~Ci~ 37 (55)
T 1iym_A 3 DDGVECAVCLAELE-DGEEARFLPRCGHGFHAECVD 37 (55)
T ss_dssp CCSCCCTTTCCCCC-TTSCCEECSSSCCEECTTHHH
T ss_pred CCCCcCccCCcccc-CCCceEECCCCCCcccHHHHH
Confidence 45669999997543 344566666899999999964
No 227
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=45.76 E-value=20 Score=41.88 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=40.0
Q ss_pred hhh-hhhcccccccccccCcCceeEEEeee--EEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCC---cEEEE
Q psy11602 287 MLD-EMIQNSEEFYADLDTRGIFRVHQFEK--VEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGI---AYRVV 354 (1083)
Q Consensus 287 ~~~-~~~~~~~~~~~~~~trGl~Rvhqf~k--vE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~l---pyRvv 354 (1083)
.+| +++....+||+.+..+| |.+||.. +|.|+...+ .++ .|++..+.++|+.||| .|++.
T Consensus 121 ~~P~r~~y~g~vfR~e~~~~g--R~ReF~Q~g~ei~G~~~~---~~D---aEvi~l~~~~l~~lgl~~~~~~i~ 186 (456)
T 3lc0_A 121 LLPAKWYSIPQCWRYEAITRG--RRREHYQWNMDIVGVKSV---SAE---VELVCAACWAMRSLGLSSKDVGIK 186 (456)
T ss_dssp CSSEEEEECCEEECCCC-------CCEEEEEEEEEESCCST---HHH---HHHHHHHHHHHHHTTCCTTTEEEE
T ss_pred CCCEEEEEeccEEecCCCCCC--CccceEEEEEEEEcCCCh---Hhh---HHHHHHHHHHHHHcCCCCCceEEE
Confidence 456 77777889998876555 8888887 555555433 233 3799999999999999 46554
No 228
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.70 E-value=3.9 Score=35.66 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=28.3
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCccccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQ 726 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~ 726 (1083)
.....|++|...--.-..+-+.|..|++.||..|....
T Consensus 26 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v 63 (74)
T 2db6_A 26 KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYV 63 (74)
T ss_dssp SSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGG
T ss_pred CCCcCchhcChhhccccCCccccCCCCCccChhHHhhC
Confidence 34569999975422123588999999999999998743
No 229
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=44.03 E-value=20 Score=41.14 Aligned_cols=60 Identities=18% Similarity=0.226 Sum_probs=40.2
Q ss_pred hhh-hhhcccccccccccCcCceeEEEeee--EEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCc-EEEE
Q psy11602 287 MLD-EMIQNSEEFYADLDTRGIFRVHQFEK--VEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIA-YRVV 354 (1083)
Q Consensus 287 ~~~-~~~~~~~~~~~~~~trGl~Rvhqf~k--vE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lp-yRvv 354 (1083)
.+| +++....+||+.+.-.| |.+||.. +|.|+. ++ ..++ .|++..+.++|+.|||+ |++.
T Consensus 101 ~~P~r~~y~g~vfR~e~~~~g--R~Ref~Q~g~ei~G~--~~-~~aD---aEvi~l~~~~l~~lgl~~~~i~ 164 (400)
T 3od1_A 101 AYPLRLAYQSNVYRAQQNEGG--KPAEFEQLGVELIGD--GT-ASAD---GEVIALMIAALKRAGLSEFKVA 164 (400)
T ss_dssp CSCEEEEEEEEEECCCC---C--CCSEEEEEEEEEESC--CS-HHHH---HHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCeEEEEEcCEEeCCCCCCC--CCCccEEeEEEEECC--CC-hHhH---HHHHHHHHHHHHHCCCCceEEE
Confidence 345 66777778888765445 8889987 555553 32 2233 47999999999999994 6654
No 230
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.00 E-value=2.9 Score=35.26 Aligned_cols=41 Identities=10% Similarity=0.158 Sum_probs=30.3
Q ss_pred eeeccCCC---CcccccchhhhHHHHHHhhhhcccceecccccCC
Q psy11602 647 IVECDSCG---VTVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKF 688 (1083)
Q Consensus 647 l~~C~~Cg---~~~h~~~~~~~~~~i~~~~~~~~~W~~~~d~~~~ 688 (1083)
|...++|- -++..+...++.|.|.|++.+ ++|++|+|+++.
T Consensus 15 LarWsDGlfYlgtV~kV~~~~~~ClV~FeD~s-~~wv~~kdi~~~ 58 (63)
T 2e5q_A 15 LCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNS-KYWVLWKDIQHA 58 (63)
T ss_dssp EEECTTSCEEEEEECCCCSTTSEEEEEETTSC-EEEEEGGGEECC
T ss_pred EEEecCCCEEEEEEEEEecCCCEEEEEEccCc-eeEEEeeccccc
Confidence 55555553 244556666789999999888 899999998753
No 231
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=43.57 E-value=10 Score=34.06 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=28.4
Q ss_pred CCCccccccCCC-CCCCCCcEEEcccCCccccccccccc
Q psy11602 689 SKILVCCVCLGE-RSDDVNEIVECDSCGVTVHEGCYGVQ 726 (1083)
Q Consensus 689 ~~~~~C~VC~~~-~~~~~n~iv~Cd~C~i~VH~~CYGv~ 726 (1083)
+....|+||... .+...-.-+.|.-|++.||..|+...
T Consensus 36 ~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~~ 74 (84)
T 1r79_A 36 PVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESL 74 (84)
T ss_dssp CTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHC
T ss_pred CCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHhc
Confidence 445699999864 22234477899999999999998643
No 232
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.54 E-value=11 Score=33.16 Aligned_cols=52 Identities=19% Similarity=0.499 Sum_probs=40.5
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCC
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAG 751 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~ 751 (1083)
.+....|.-|...-.--.|.-..|..|...|=..| ++... .+.|+|-.|...
T Consensus 22 ~~~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~C-rv~~~-----------~~~W~C~VC~k~ 73 (76)
T 2csz_A 22 HYSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDC-RIQES-----------NGTWRCKVCSGP 73 (76)
T ss_dssp TCCCCBCSSSCCBCSSSCTTTSEETTTTEECCTTS-EEECS-----------TTCEEEHHHHSS
T ss_pred CCCccchhhhCccccccccCCCcCcccChhhcccc-cccCC-----------CCCEEEeeCchh
Confidence 46778999998776656778889999999999999 44322 367999999654
No 233
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=40.59 E-value=8.2 Score=32.15 Aligned_cols=34 Identities=24% Similarity=0.541 Sum_probs=27.2
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|+.|.+.- ..+-+.|..|++.+|..|...
T Consensus 20 ~~pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 20 GGPGWCDLCGREV---LRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp SCCEECTTTCSEE---CSCCEECTTTSCEECHHHHTT
T ss_pred CCCeEchhcchhh---hhCccEeCCCCCeEehhhhhh
Confidence 4456899997543 567899999999999999753
No 234
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=39.38 E-value=15 Score=42.47 Aligned_cols=63 Identities=14% Similarity=0.068 Sum_probs=39.2
Q ss_pred hhhcccccccccccCcCceeEEEeee--EEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCcEEEEecc
Q psy11602 290 EMIQNSEEFYADLDTRGIFRVHQFEK--VEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIV 357 (1083)
Q Consensus 290 ~~~~~~~~~~~~~~trGl~Rvhqf~k--vE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lpyRvv~~~ 357 (1083)
+++....+||+.+..-|..|.+||.. +|.|+...|...+ -|++..+-++|+.|||.--++.+.
T Consensus 106 k~~y~g~vfR~erp~~~~gR~Ref~Q~g~ei~G~~~~~~aD-----aEvi~l~~~~l~~lgl~~~~i~i~ 170 (464)
T 4g84_A 106 KRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPD-----AECLKIMCEILSSLQIGDFLVKVN 170 (464)
T ss_dssp EEEEEEEEECCCC------CCSEEEEEEEEEESCCSTTHHH-----HHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred eeEEEecceeccCCccccCccceeeecceeccCCccchhhH-----HHHHHHHHHHHHHhCCCCcceeec
Confidence 56666678888765446678777776 5666644443223 258889999999999975555443
No 235
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=38.20 E-value=11 Score=33.01 Aligned_cols=37 Identities=19% Similarity=0.468 Sum_probs=24.3
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
..++..|.||++.-+..+-.++-| .||..+++.|+..
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~ 44 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHR 44 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHH
T ss_pred cccCCcCCccCccCcccccccccc-CCCCCcCHHHHHH
Confidence 356779999997543222233334 6888888888753
No 236
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=35.92 E-value=47 Score=39.28 Aligned_cols=143 Identities=15% Similarity=0.192 Sum_probs=83.7
Q ss_pred hhhcccccccccccCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCC-cEEEEeccCCCcchhhhce
Q psy11602 290 EMIQNSEEFYADLDTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGI-AYRVVNIVSGALNHAAAKK 368 (1083)
Q Consensus 290 ~~~~~~~~~~~~~~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~l-pyRvv~~~~~dl~~~a~~~ 368 (1083)
+++....+||..... --+..+|+.+|-+.+-.+- -|..+....+.|++.||+ .+|.. ++-. .+. .-.
T Consensus 349 riFeiGrVFR~d~~D--atHlpeFhQlegl~~~~~v------~f~dLKg~Le~~l~~lG~~~~rfr--ps~f-Pft-ePS 416 (508)
T 3l4g_A 349 KYFSIDRVFRNETLD--ATHLAEFHQIEGVVADHGL------TLGHLMGVLREFFTKLGITQLRFK--PAYN-PYT-EPS 416 (508)
T ss_dssp EEEEEEEEECCSCCC--SSSCSEEEEEEEEEEEESC------CHHHHHHHHHHHHHTTTCCCCEEE--ECCC-TTC-SSE
T ss_pred eEEEEccEEecCCCC--CCcCCeEEEEEEEEECCCC------CHHHHHHHHHHHHHHcCCcceEee--ccCC-CCC-CCe
Confidence 344445577764422 2345679999987764332 377788999999999998 36533 3221 111 113
Q ss_pred eeEEEeeCCCCcEEeeecccCcccccccccceEEecccCCCCceeeEEeecccccchhHHHHHHHhhccCCCceecCccc
Q psy11602 369 LDLEAWFPGSGAFRELVSCSNCLAYQSRRLLVRYGQTKKMNEKIEFVHMLNATACATTRVICAILETHQTETGVRIPDCL 448 (1083)
Q Consensus 369 ~DiE~w~P~~~~y~Ev~S~sn~~d~qarrl~iry~~~~~~~~~~~~~htln~t~~a~~R~i~ailEn~q~~~Gi~iP~~L 448 (1083)
+-++++.++.++|.||+-|.-..---.+.++| .+. -.-| +.++.+.|++.... | ||+ |
T Consensus 417 ~ev~i~~~G~~~W~EIGg~G~vhP~VL~~~Gi--pe~-----~~v~-----AfgLgLeRLaml~~-------g--i~d-i 474 (508)
T 3l4g_A 417 MEVFSYHQGLKKWVEVGNSGVFRPEMLLPMGL--PEN-----VSVI-----AWGLSLERPTMIKY-------G--INN-I 474 (508)
T ss_dssp EEEEECCSTTSSCEEEEEEECCCHHHHGGGTC--CTT-----EEEE-----EEEEESHHHHTTTT-------T--CSC-G
T ss_pred EEEEEEECCccceEEEEeeeeEcHHHHHHCCC--CCC-----ceEE-----EEEecHHHHHHHHc-------C--CcH-H
Confidence 44466778888999999887655444555665 110 0123 45667778754322 1 333 6
Q ss_pred cccCCCcccCCCcccCCCCCCCC
Q psy11602 449 RKFVPAVYVNEAGEIPFVKTAPI 471 (1083)
Q Consensus 449 ~py~~~~~~~~~~~~~~~~~~p~ 471 (1083)
|.+.++.. ++.|+...|+
T Consensus 475 R~l~~~~~-----dl~~~~~~~~ 492 (508)
T 3l4g_A 475 RELVGHKV-----NLQMVYDSPL 492 (508)
T ss_dssp GGTSSTTC-----CHHHHHHCCC
T ss_pred HHHhcCCc-----CHHHHhhCcc
Confidence 77765432 3566666665
No 237
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=35.47 E-value=23 Score=30.99 Aligned_cols=42 Identities=14% Similarity=0.049 Sum_probs=30.5
Q ss_pred ccCcccccCCCCCCccccccccccccCCcc-cccc--cccccCCCCCcce
Q psy11602 517 VIGKGEKVGDSAPEKDELDDKYLIATSEQP-ICAV--HRDSWLPEASLPI 563 (1083)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~c~~--~~~~~~~~~~~~~ 563 (1083)
..|+|+++--+.. -+-|+..+++|| .|.. |+|.|.....|..
T Consensus 3 ~~~~~~~~~~~~~-----~~~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~ 47 (73)
T 1x3c_A 3 SGSSGRKKPVSQS-----LEFPTRYSPYRPYRCVHQGCFAAFTIQQNLIL 47 (73)
T ss_dssp CCCCCCCCCCCCC-----CCCSSSSCSSCSCBCCSTTCCCBCSSHHHHHH
T ss_pred CCCcCcccccccC-----ccccccccCCCCeECCCCCcChhHcCHHHHHH
Confidence 3566666643322 245678999999 8976 9999998888777
No 238
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=35.00 E-value=21 Score=40.53 Aligned_cols=37 Identities=19% Similarity=0.412 Sum_probs=30.2
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
.....|.+|...-.+-..+-..|..|+..||..|..-
T Consensus 355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGG
T ss_pred CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhh
Confidence 4556999998755445689999999999999999763
No 239
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.91 E-value=18 Score=30.70 Aligned_cols=36 Identities=19% Similarity=0.485 Sum_probs=25.3
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
..+...|.||+..-. ....+..-.|+..+|..|...
T Consensus 20 ~~~~~~C~IC~~~~~--~~~~~~~l~C~H~fh~~Ci~~ 55 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFE--SRQLLRVLPCNHEFHAKCVDK 55 (75)
T ss_dssp SSSCCEETTTTEECC--BTCEEEEETTTEEEETTHHHH
T ss_pred cCCCCCCeECCcccC--CCCeEEEECCCCHhHHHHHHH
Confidence 456779999996432 334555556999999999643
No 240
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=33.60 E-value=20 Score=43.81 Aligned_cols=107 Identities=20% Similarity=0.328 Sum_probs=26.2
Q ss_pred ccccccCCcc-cccccccccCCCCCcceeecccccccccccCCCccceeeecccccccccccccccccccCCCCCCcccc
Q psy11602 537 KYLIATSEQP-ICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQREGLLSEATSEEVDQADPFYAHCR 615 (1083)
Q Consensus 537 ~~~~~~~~~~-~c~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~c~~~~H~~ca~~~g~~~e~~~~~~~~~~p~~~~c~ 615 (1083)
.+...+-.+| +|++|+... .|+.- -+..|. .|...+|-.|.+.....=..........+|- .
T Consensus 39 ~f~~~~~~~p~~C~~C~~~i---~g~~~--------qg~~C~--~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~----~ 101 (674)
T 3pfq_A 39 KFTARFFKQPTFCSHCTDFI---WGFGK--------QGFQCQ--VCSFVVHKRCHEFVTFSCPGADKGPASDDPR----S 101 (674)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEeeeCCCCCccccccccc---cccCC--------ceeECC--CCCCCcChhhcCcCcccCCCccccccccccc----C
Confidence 3445556677 999999642 12211 123455 6778899888663321000000000000111 1
Q ss_pred cccccccccccCCCceeeccccCCCCCCCCceeeccCCCCcccccchh
Q psy11602 616 LHADKLEDFSKFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEVKIQ 663 (1083)
Q Consensus 616 ~h~~k~~~~~~~~~~~~c~~c~g~~~~~~~~l~~C~~Cg~~~h~~~~~ 663 (1083)
.|.=.. ........|++|-.--..-.+.-..|..|+..+|..|..
T Consensus 102 ~h~~~~---~~~~~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 146 (674)
T 3pfq_A 102 KHKFKI---HTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVM 146 (674)
T ss_dssp CCCCCE---ECCSSCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTS
T ss_pred Ccceee---cCCCCCCCCCccccccchhhcCccccccCCcchhhhhhh
Confidence 121111 122233469999443222233478999999999999974
No 241
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=33.35 E-value=5.3 Score=34.26 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=25.7
Q ss_pred cccccchhhhHHHHHHhhhhcccceecccccCC
Q psy11602 656 TVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKF 688 (1083)
Q Consensus 656 ~~h~~~~~~~~~~i~~~~~~~~~W~~~~d~~~~ 688 (1083)
+|..+....++|.|.|++.+ ++|++|+|+++.
T Consensus 33 tI~~V~~~~gtC~V~F~D~s-~~w~~~kdi~~~ 64 (66)
T 2eqj_A 33 TIKKINILKQSCFIIFEDSS-KSWVLWKDIQTG 64 (66)
T ss_dssp EEEEEETTTTEEEEEETTTE-EEEEETTTEECC
T ss_pred EEEEEccCCcEEEEEEccCC-EEEEEeeccccc
Confidence 45556666789999998888 899999998753
No 242
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=33.33 E-value=41 Score=39.22 Aligned_cols=61 Identities=15% Similarity=0.195 Sum_probs=37.9
Q ss_pred hh-hhhcccccccccccCcCceeEEEeee--EEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCc-EEEE
Q psy11602 288 LD-EMIQNSEEFYADLDTRGIFRVHQFEK--VEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIA-YRVV 354 (1083)
Q Consensus 288 ~~-~~~~~~~~~~~~~~trGl~Rvhqf~k--vE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lp-yRvv 354 (1083)
+| +++....+||+.+.-+| |.+||.. ||.|+...+. +..- -|+|..+.++|+.|||+ |++.
T Consensus 119 ~p~r~~y~g~vfR~e~~~~g--r~Ref~Q~g~ei~G~~~~~---a~~D-aEvi~l~~~~l~~lgl~~~~i~ 183 (465)
T 3net_A 119 FPFARYQMDVVFRGERAKDG--RFRQFRQCDIDVVGREKLS---LLYD-AQMPAIITEIFEAVNIGDFVIR 183 (465)
T ss_dssp SSEEEEECCEEECBC--------CCEEEEEEEEEECSSCCC---HHHH-HHHHHHHHHHHHHHTCSCEEEE
T ss_pred CCeEEEEeccEEecCCCCCC--CcceeEEeeEEEECCCCcc---chhh-HHHHHHHHHHHHHcCCCceEEE
Confidence 44 66677778888766556 6678877 6777654442 2101 27999999999999996 5543
No 243
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.16 E-value=21 Score=28.61 Aligned_cols=30 Identities=27% Similarity=0.546 Sum_probs=24.6
Q ss_pred ccCCCCCCCCcccccccCC--CCCCceeecCC
Q psy11602 733 STVSSCSTEPWFCESCRAG--IAEPTCELCPN 762 (1083)
Q Consensus 733 ~~~~~~~~~~W~Cd~C~~~--~~~~~C~LCp~ 762 (1083)
++.++.+.+.|-|+.|... .....|+-|..
T Consensus 2 ~~~~~~~~g~W~C~~C~v~N~a~~~kC~aCet 33 (47)
T 2ebq_A 2 SSGSSGVIGTWDCDTCLVQNKPEAIKCVACET 33 (47)
T ss_dssp CSSCCCCSSSEECSSSCCEECSSCSBCSSSCC
T ss_pred CCCcCCCCCceECCeeeccCccCCceecCcCC
Confidence 3566778899999999864 57799999987
No 244
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=32.98 E-value=5.3 Score=33.32 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=30.7
Q ss_pred eeeccCCCC---cccccchhhhHHHHHHhhhhcccceecccccCC
Q psy11602 647 IVECDSCGV---TVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSKF 688 (1083)
Q Consensus 647 l~~C~~Cg~---~~h~~~~~~~~~~i~~~~~~~~~W~~~~d~~~~ 688 (1083)
|..|++|-. +|..+....+.|.|.|.+.+ ++|+.|+|+++.
T Consensus 11 LarwsDG~fYlGtI~~V~~~~~~clV~F~D~s-~~W~~~kdi~~~ 54 (58)
T 4hcz_A 11 LARWTDGLLYLGTIKKVDSAREVCLVQFEDDS-QFLVLWKDISPA 54 (58)
T ss_dssp EEECTTSCEEEEEEEEEETTTTEEEEEETTSC-EEEEEGGGEEEC
T ss_pred EEEecCCCEEeEEEEEEecCCCEEEEEEcCCC-eEEEEhHHcccc
Confidence 677777532 34445566789999999888 899999998753
No 245
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A*
Probab=32.21 E-value=78 Score=37.68 Aligned_cols=82 Identities=9% Similarity=0.118 Sum_probs=51.9
Q ss_pred EEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCc-EEEEeccCCCc--chhhhceeeEEEeeCCC--------C
Q psy11602 311 HQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIA-YRVVNIVSGAL--NHAAAKKLDLEAWFPGS--------G 379 (1083)
Q Consensus 311 hqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lp-yRvv~~~~~dl--~~~a~~~~DiE~w~P~~--------~ 379 (1083)
.||..++.+.+-.+.. |.++....+.|++.||+. +|+.. +.+- .+--.....|++|.|+. +
T Consensus 227 ~Ef~qLagli~G~~vd------f~dLKgilE~LL~~LGi~~~r~~~--~~~~~~~yhPgt~aeI~v~~~~~~g~~~~~~~ 298 (534)
T 2du3_A 227 YTYFSASCVLVDEELS------VDDGKAVAEALLRQFGFENFRFRK--DEKRSKYYIPDTQTEVFAFHPKLVGSSTKYSD 298 (534)
T ss_dssp SEEEEEEEEEECSSCC------HHHHHHHHHHHHGGGTCCEEEEEE--CTTCCTTBCTTTCEEEEEEEEEEETCSSSCTE
T ss_pred ceeeEEEEEEECCCCC------HHHHHHHHHHHHHHcCCCeEEEEE--CCCCcccccCCeEEEEEEEeccccccccccCC
Confidence 6899888887665421 677999999999999996 77764 2221 02223446777776642 3
Q ss_pred cEEeeecccCcccccccccce
Q psy11602 380 AFRELVSCSNCLAYQSRRLLV 400 (1083)
Q Consensus 380 ~y~Ev~S~sn~~d~qarrl~i 400 (1083)
.|.||+.|.-..---.+.++|
T Consensus 299 gW~eIG~~G~vhP~VL~~~gi 319 (534)
T 2du3_A 299 GWIEIATFGIYSPTALAEYDI 319 (534)
T ss_dssp EEEEEEEEEEBCHHHHHTTTC
T ss_pred CCEEEEEEEEECHHHHHHcCC
Confidence 578887775443333344444
No 246
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=31.05 E-value=6.9 Score=33.69 Aligned_cols=41 Identities=15% Similarity=0.344 Sum_probs=29.1
Q ss_pred eeeccCCCCcc--cccchhhhHHHHHHhhhhcccceecccccCCC
Q psy11602 647 IVECDSCGVTV--HEVKIQQEFLAIKFLIRYLLFWFQLEDFSKFS 689 (1083)
Q Consensus 647 l~~C~~Cg~~~--h~~~~~~~~~~i~~~~~~~~~W~~~~d~~~~~ 689 (1083)
|+.|++ |.=+ ..+...++.|+|.|++++ ++|+.|+|+.+..
T Consensus 23 L~rw~D-G~fYLGtIVd~~~~~ClV~FeD~S-~~Wv~~kdi~kl~ 65 (69)
T 2xk0_A 23 FIKCND-GRFYLGTIIDQTSDQYLIRFDDQS-EQWCEPDKLRKLG 65 (69)
T ss_dssp EEECTT-SCEEEEEEEEECSSCEEEEETTCC-EEEECTTTEECSS
T ss_pred EEEecC-CCEEEEEEEecCCceEEEEecCCc-ceeeeHHHHHhhc
Confidence 556655 3322 224555788999999988 7999999987643
No 247
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=30.89 E-value=49 Score=37.33 Aligned_cols=55 Identities=24% Similarity=0.517 Sum_probs=37.0
Q ss_pred ccc-ccCCCCCcc----ccccccccccccccCCCCC-Cc--ceecC--ccCCCccccCCCCCCCC
Q psy11602 1019 MEV-VFPQPPLSK----QAWGVLSHKCGLCHLSHDP-HT--MAKCD--TCHLYYHLACLDPPLLR 1073 (1083)
Q Consensus 1019 ~gv-~~p~~~l~~----~~~~~~~~~c~~C~~~~~~-~~--~~~Cd--~C~~~yH~~Cl~Ppl~~ 1073 (1083)
+|+ .||.|..+. +..+.....|.||=..-.+ .. -..|+ .|...||..||..=|.+
T Consensus 285 L~i~~fP~p~~~~~~~~~e~ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs 349 (381)
T 3k1l_B 285 FDLCYFPMPDWSDGPKLDEEDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKT 349 (381)
T ss_dssp TTCSSCCCCCGGGCCSCTTCCCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHH
T ss_pred hCccccCCCcccccccccccccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHh
Confidence 788 888887543 2234567779999543333 22 34698 99999999999664433
No 248
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=30.39 E-value=18 Score=32.59 Aligned_cols=36 Identities=17% Similarity=0.360 Sum_probs=27.4
Q ss_pred CCCccccccCCCCCCCCCc--EEEcccCCccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNE--IVECDSCGVTVHEGCYG 724 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~--iv~Cd~C~i~VH~~CYG 724 (1083)
.....|+.|...--.-..+ -+.|..|++.||..|..
T Consensus 33 ~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 33 HFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp SSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred CCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 4456899997543322344 89999999999999987
No 249
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=30.13 E-value=30 Score=27.22 Aligned_cols=35 Identities=23% Similarity=0.514 Sum_probs=25.5
Q ss_pred CCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 690 KILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
....|.||++.-. +.+..+..-.|+..+|..|...
T Consensus 4 ~~~~C~IC~~~~~-~~~~~~~~~~CgH~fc~~Ci~~ 38 (55)
T 2ecm_A 4 GSSGCPICLEDIH-TSRVVAHVLPCGHLLHRTCYEE 38 (55)
T ss_dssp CCCSCTTTCCCCC-TTTSCEEECTTSCEEETTHHHH
T ss_pred CCCcCcccChhhc-CCCcCeEecCCCCcccHHHHHH
Confidence 4568999996533 3345566778999999999754
No 250
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.09 E-value=19 Score=31.44 Aligned_cols=36 Identities=19% Similarity=0.484 Sum_probs=24.7
Q ss_pred CCccccccCCCCCC----------CCCcEEEcccCCcccccccccc
Q psy11602 690 KILVCCVCLGERSD----------DVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~----------~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
++..|.||++.-.+ .++..+.--.|+..+|..|...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~ 59 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 59 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHH
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHH
Confidence 45589999876433 2344555558999999999543
No 251
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=29.80 E-value=28 Score=41.71 Aligned_cols=38 Identities=21% Similarity=0.503 Sum_probs=30.6
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
+.....|.+|...-..-..+-+.|..|+..||..|.+.
T Consensus 526 ~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 526 FEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp CSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred CCCCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 35567999998654345678899999999999999875
No 252
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.14 E-value=21 Score=31.46 Aligned_cols=35 Identities=26% Similarity=0.544 Sum_probs=22.5
Q ss_pred CCCccccccCCCCCCCCCcEEE---cccCCccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVE---CDSCGVTVHEGCYG 724 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~---Cd~C~i~VH~~CYG 724 (1083)
.+...|.||+.... +++.++. |.+....||+.|.-
T Consensus 13 ~~~~~C~IC~~~~~-~~~~l~~pC~C~Gs~h~fH~~Cl~ 50 (80)
T 2d8s_A 13 SSQDICRICHCEGD-DESPLITPCHCTGSLHFVHQACLQ 50 (80)
T ss_dssp TTSCCCSSSCCCCC-SSSCEECSSSCCSSSCCEETTHHH
T ss_pred CCCCCCeEcCcccc-CCCeeEeccccCCcCCeeCHHHHH
Confidence 45669999997543 3455542 22224899999954
No 253
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=28.83 E-value=12 Score=35.44 Aligned_cols=43 Identities=21% Similarity=0.519 Sum_probs=27.2
Q ss_pred cEEEcccCCcccccccccccccCCCcccCCC-CCCCCcccccccCC
Q psy11602 707 EIVECDSCGVTVHEGCYGVQDTASISSTVSS-CSTEPWFCESCRAG 751 (1083)
Q Consensus 707 ~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~-~~~~~W~Cd~C~~~ 751 (1083)
.||.||.|+--+|-.|-++...... -... .....|.|..|...
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~--~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYE--ILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHH--HHHSSCTTTTCCSSCCTTT
T ss_pred CccccccCCCccCCcccccCHHHHH--HHhhccccceeeCcccccc
Confidence 3789999999999999888541000 0000 12346888888653
No 254
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=27.80 E-value=18 Score=36.82 Aligned_cols=27 Identities=26% Similarity=0.540 Sum_probs=22.7
Q ss_pred eeeccccCCCCCCCCceeeccCCCCcccccch
Q psy11602 631 LVCCVCLGERSDDVNEIVECDSCGVTVHEVKI 662 (1083)
Q Consensus 631 ~~c~~c~g~~~~~~~~l~~C~~Cg~~~h~~~~ 662 (1083)
.+|.+|... ..|+.|+.|...+|..|+
T Consensus 5 ~~C~~C~~~-----g~ll~Cd~C~~~~H~~C~ 31 (184)
T 3o36_A 5 DWCAVCQNG-----GELLCCEKCPKVFHLSCH 31 (184)
T ss_dssp SSCTTTCCC-----SSCEECSSSSCEECTTTS
T ss_pred CccccCCCC-----CeeeecCCCCcccCcccc
Confidence 579999643 349999999999999997
No 255
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=26.77 E-value=47 Score=39.15 Aligned_cols=61 Identities=20% Similarity=0.199 Sum_probs=38.1
Q ss_pred hhhccccccccccc--CcCceeEEEeee--EEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCcEEEEecc
Q psy11602 290 EMIQNSEEFYADLD--TRGIFRVHQFEK--VEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIAYRVVNIV 357 (1083)
Q Consensus 290 ~~~~~~~~~~~~~~--trGl~Rvhqf~k--vE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lpyRvv~~~ 357 (1083)
+++....+||+.+. .+| |.+||+. +|.|+...|...+ -|++..+-++|+.|||.--++.+.
T Consensus 159 k~yyig~vfR~Erp~~~~G--R~ReF~Q~g~ei~G~~~~~~aD-----aEvi~l~~~~l~~lgl~~~~i~in 223 (517)
T 4g85_A 159 KRYHIAKVYRRDNPAMTRG--RYREFYQCDFDIAGNFDPMIPD-----AECLKIMCEILSSLQIGDFLVKVN 223 (517)
T ss_dssp EEEEEEEEECCCC---------CCEEEEEEEEEESCCCTTHHH-----HHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred eeEEEeceEeccCcccccC--ccceeeeeceeccCCccchHHH-----HHHHHHHHHHHHhhcCCccccccc
Confidence 56667778888765 445 7777776 5666544443222 258899999999999965444443
No 256
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=26.48 E-value=33 Score=28.48 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=24.2
Q ss_pred CCCCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 688 FSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 688 ~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
......|.||+..-. ....+..-.|+..+|..|...
T Consensus 11 ~~~~~~C~IC~~~~~--~~~~~~~~~C~H~fc~~Ci~~ 46 (69)
T 2kiz_A 11 EDTEEKCTICLSILE--EGEDVRRLPCMHLFHQVCVDQ 46 (69)
T ss_dssp TTCCCSBTTTTBCCC--SSSCEEECTTSCEEEHHHHHH
T ss_pred CCCCCCCeeCCcccc--CCCcEEEeCCCCHHHHHHHHH
Confidence 456679999986432 223344457999999999653
No 257
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A*
Probab=26.25 E-value=1.1e+02 Score=34.25 Aligned_cols=87 Identities=16% Similarity=0.231 Sum_probs=52.9
Q ss_pred hhhcccccccccc-cCcCceeEEEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHh-CCc--EEEEeccCCCcchhh
Q psy11602 290 EMIQNSEEFYADL-DTRGIFRVHQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADL-GIA--YRVVNIVSGALNHAA 365 (1083)
Q Consensus 290 ~~~~~~~~~~~~~-~trGl~Rvhqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L-~lp--yRvv~~~~~dl~~~a 365 (1083)
+++....+||.+. +.+ +..||+.+|-+.+-..- -|..+....+.|++.| |++ +|.. ++..-..--
T Consensus 195 riFEiGrVFR~d~~d~t---H~pEF~qlegl~~g~~v------~f~dLKg~le~ll~~lfG~~~~~r~r--ps~fPft~P 263 (350)
T 1b7y_A 195 RIVVPGRVFRFEQTDAT---HEAVFHQLEGLVVGEGI------AMAHLKGAIYELAQALFGPDSKVRFQ--PVYFPFVEP 263 (350)
T ss_dssp EEEEEEEEECCCCCCSS---CCSEEEEEEEEEEETTC------CHHHHHHHHHHHHHHHSCSSCCEEEE--ECCBTTEEE
T ss_pred eEEEeeeEEECCCCCCC---CCChhHEEEEEEECCCC------CHHHHHHHHHHHHHhhcCCCceEEEe--cCCCCCCCC
Confidence 3555566777543 322 34799999999887642 2778888999999998 864 5543 332211122
Q ss_pred hceeeEEEeeCCCCcEEeeecccC
Q psy11602 366 AKKLDLEAWFPGSGAFRELVSCSN 389 (1083)
Q Consensus 366 ~~~~DiE~w~P~~~~y~Ev~S~sn 389 (1083)
...+|| +..-.+.|.||+-|.-
T Consensus 264 s~e~~i--~~~~~g~w~eIg~~G~ 285 (350)
T 1b7y_A 264 GAQFAV--WWPEGGKWLELGGAGM 285 (350)
T ss_dssp EEEEEE--EETTTTEEEEEEEEEE
T ss_pred ccEEEE--EEEeCCCeEEEEEEEE
Confidence 333343 3323456888887753
No 258
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=25.36 E-value=41 Score=34.31 Aligned_cols=31 Identities=13% Similarity=0.207 Sum_probs=22.8
Q ss_pred ccCCCCCCCCCcEEEcccCCcccccccccccc
Q psy11602 696 VCLGERSDDVNEIVECDSCGVTVHEGCYGVQD 727 (1083)
Q Consensus 696 VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~ 727 (1083)
-|+++. +-...+|+|+.|..-+|..|.+...
T Consensus 9 YCG~~~-~~~~~mLqC~~C~qWFH~~Cl~~~~ 39 (177)
T 3rsn_A 9 DEENGR-QLGEVELQCGICTKWFTADTFGIDT 39 (177)
T ss_dssp --CTTC-CTTSCEEECTTTCCEEEGGGGTCCC
T ss_pred EcCCCC-CCCceeEeeccccceecHHHhcccc
Confidence 455543 3467999999999999999988543
No 259
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=25.22 E-value=5.5 Score=30.74 Aligned_cols=23 Identities=13% Similarity=0.421 Sum_probs=19.9
Q ss_pred ccCCcc-cccccccccCCCCCcce
Q psy11602 541 ATSEQP-ICAVHRDSWLPEASLPI 563 (1083)
Q Consensus 541 ~~~~~~-~c~~~~~~~~~~~~~~~ 563 (1083)
.++++| .|.+|++.|.....|..
T Consensus 2 Ht~~kp~~C~~C~k~F~~~~~L~~ 25 (48)
T 3iuf_A 2 EDRDKPYACDICGKRYKNRPGLSY 25 (48)
T ss_dssp CTTTSCEECTTTCCEESSHHHHHH
T ss_pred CCCCcCEECCCcCcccCCHHHHHH
Confidence 467889 89999999998888877
No 260
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=25.10 E-value=8.8 Score=33.72 Aligned_cols=40 Identities=18% Similarity=0.200 Sum_probs=30.0
Q ss_pred eeeccCCCC---cccccchhhhHHHHHHhhhhcccceecccccC
Q psy11602 647 IVECDSCGV---TVHEVKIQQEFLAIKFLIRYLLFWFQLEDFSK 687 (1083)
Q Consensus 647 l~~C~~Cg~---~~h~~~~~~~~~~i~~~~~~~~~W~~~~d~~~ 687 (1083)
|+.|++|-. +|..+...++.|+|.|.+.+ ++|+.|+|++.
T Consensus 34 LarwsDGlfYLGTI~kV~~~~e~ClV~F~D~S-~~W~~~kdi~~ 76 (79)
T 2m0o_A 34 LARWTDGLLYLGTIKKVDSAREVCLVQFEDDS-QFLVLWKDISP 76 (79)
T ss_dssp EBCCTTSCCCEEEEEEEETTTTEEEEEETTSC-EEEEETTTBCC
T ss_pred EEEecCCCEEeEEEEEeccCCCEEEEEEcCCC-eEEEEeecccc
Confidence 666666533 34555666788999999888 89999999864
No 261
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=25.06 E-value=38 Score=27.24 Aligned_cols=29 Identities=31% Similarity=0.611 Sum_probs=23.1
Q ss_pred ccccccCCCCCCCCCcEEEcccCCccccccccc
Q psy11602 692 LVCCVCLGERSDDVNEIVECDSCGVTVHEGCYG 724 (1083)
Q Consensus 692 ~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYG 724 (1083)
..|++|...- . .=+.|..|+..+|+.|-.
T Consensus 15 t~C~~C~k~i-~---~G~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSM-I---FGVKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSS-C---CEEEETTTTEEESSSCTT
T ss_pred cCccccCcee-E---CcCCCCCCCCccchhhcC
Confidence 4899998643 2 238999999999999965
No 262
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=25.03 E-value=34 Score=30.39 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=24.0
Q ss_pred CCCCCccccccCCCCCCCCCcEEEcccCCccccccccc
Q psy11602 687 KFSKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYG 724 (1083)
Q Consensus 687 ~~~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYG 724 (1083)
...++..|.||+.... +++..+. -.|+..+|..|..
T Consensus 36 ~~~~~~~C~IC~~~~~-~~~~~~~-l~C~H~Fh~~Ci~ 71 (91)
T 2l0b_A 36 AVGQEMCCPICCSEYV-KGDVATE-LPCHHYFHKPCVS 71 (91)
T ss_dssp SSSSCSEETTTTEECC-TTCEEEE-ETTTEEEEHHHHH
T ss_pred ccCCCCCCcccChhhc-CCCcEEe-cCCCChHHHHHHH
Confidence 3456779999995432 2333333 4599999999954
No 263
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.99 E-value=49 Score=29.06 Aligned_cols=40 Identities=25% Similarity=0.477 Sum_probs=25.5
Q ss_pred ccCCcccccccccccCCCCCcceeecccccccccccCCCccceeeeccccc
Q psy11602 541 ATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQECDAGMCRTYFHVTCAQ 591 (1083)
Q Consensus 541 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~c~~~~H~~ca~ 591 (1083)
.+++...|.||-..+.... .+ |.-|-|. +..||||..|-+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~--~l----~~pC~C~-----Gs~h~fH~~Cl~ 50 (80)
T 2d8s_A 11 TPSSQDICRICHCEGDDES--PL----ITPCHCT-----GSLHFVHQACLQ 50 (80)
T ss_dssp CCTTSCCCSSSCCCCCSSS--CE----ECSSSCC-----SSSCCEETTHHH
T ss_pred CCCCCCCCeEcCccccCCC--ee----EeccccC-----CcCCeeCHHHHH
Confidence 4455668999998775433 22 2234333 334999999966
No 264
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=24.64 E-value=19 Score=37.39 Aligned_cols=27 Identities=22% Similarity=0.541 Sum_probs=22.6
Q ss_pred eeeccccCCCCCCCCceeeccCCCCcccccch
Q psy11602 631 LVCCVCLGERSDDVNEIVECDSCGVTVHEVKI 662 (1083)
Q Consensus 631 ~~c~~c~g~~~~~~~~l~~C~~Cg~~~h~~~~ 662 (1083)
.+|.+|... ..|+.|++|...+|..|+
T Consensus 8 ~~C~~C~~~-----g~ll~Cd~C~~~~H~~Cl 34 (207)
T 3u5n_A 8 DWCAVCQNG-----GDLLCCEKCPKVFHLTCH 34 (207)
T ss_dssp SSBTTTCCC-----EEEEECSSSSCEECTTTS
T ss_pred CCCCCCCCC-----CceEEcCCCCCccCCccC
Confidence 479999643 249999999999999998
No 265
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=23.43 E-value=32 Score=31.01 Aligned_cols=33 Identities=27% Similarity=0.531 Sum_probs=26.7
Q ss_pred ccccccCCCCCCCCCcEEEcccCCcccccccccccc
Q psy11602 692 LVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGVQD 727 (1083)
Q Consensus 692 ~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv~~ 727 (1083)
..|++|... ...-+..|..|+..+|..|-..+.
T Consensus 48 ~~C~~C~~~---~~~~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 48 YTCDKCEEE---GTIWSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp CCCTTTSCC---CCSCEEECTTTCCCCCHHHHHCSS
T ss_pred eEeCCCCCc---CCCcEEEcCCCCCeEcHHhcCCCC
Confidence 489999864 246789999999999999976543
No 266
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=22.92 E-value=17 Score=32.94 Aligned_cols=51 Identities=20% Similarity=0.525 Sum_probs=39.4
Q ss_pred CccccccCCC--CCCCCCcEEEcccCCcccccccccccccCCCcccCCCCCCCCcccccccCCC
Q psy11602 691 ILVCCVCLGE--RSDDVNEIVECDSCGVTVHEGCYGVQDTASISSTVSSCSTEPWFCESCRAGI 752 (1083)
Q Consensus 691 ~~~C~VC~~~--~~~~~n~iv~Cd~C~i~VH~~CYGv~~~~~~~~~~~~~~~~~W~Cd~C~~~~ 752 (1083)
..+|.||... ...+++.+|-|..|+-.|=..||--... ++.-.|..|...-
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErk-----------eG~q~CpqCktrY 68 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERR-----------EGTQNCPQCKTRY 68 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHH-----------TSCSSCTTTCCCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHh-----------ccCccccccCCcc
Confidence 3599999864 3347789999999999999999976543 5667777777654
No 267
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=22.57 E-value=10 Score=31.62 Aligned_cols=35 Identities=23% Similarity=0.489 Sum_probs=21.4
Q ss_pred CCCccccccCCCCCCCCCcEEEc--ccCCcccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVEC--DSCGVTVHEGCYGV 725 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~C--d~C~i~VH~~CYGv 725 (1083)
++...|.||+.... +.-+.-| .+.-..||+.|.-.
T Consensus 4 ~~~~~CrIC~~~~~--~~l~~PC~C~gs~~~~H~~Cl~~ 40 (60)
T 1vyx_A 4 EDVPVCWICNEELG--NERFRACGCTGELENVHRSCLST 40 (60)
T ss_dssp CSCCEETTTTEECS--CCCCCSCCCSSGGGSCCHHHHHH
T ss_pred CCCCEeEEeecCCC--CceecCcCCCCchhhhHHHHHHH
Confidence 35568999996522 2223443 23334999999754
No 268
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.43 E-value=32 Score=30.06 Aligned_cols=32 Identities=22% Similarity=0.674 Sum_probs=24.7
Q ss_pred CCccccccCCCCCCCCCcEEEcccCCcccccccccc
Q psy11602 690 KILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYGV 725 (1083)
Q Consensus 690 ~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYGv 725 (1083)
....|.||...-. +-+.|..|+..+|..|..-
T Consensus 14 ~i~~C~IC~~~i~----~g~~C~~C~h~fH~~Ci~k 45 (74)
T 2ct0_A 14 AVKICNICHSLLI----QGQSCETCGIRMHLPCVAK 45 (74)
T ss_dssp SSCBCSSSCCBCS----SSEECSSSCCEECHHHHHH
T ss_pred CCCcCcchhhHcc----cCCccCCCCchhhHHHHHH
Confidence 3469999996533 3368999999999999653
No 269
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=22.28 E-value=1.1e+02 Score=34.12 Aligned_cols=51 Identities=14% Similarity=0.081 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeccCCCcchhhhceeeEEEeeCCCCcEEeeecccCccc
Q psy11602 334 DEMIQNSEEFYADLGIAYRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLA 392 (1083)
Q Consensus 334 e~~~~~~e~~~~~L~lpyRvv~~~~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~sn~~d 392 (1083)
.+.-...-.++..||||.|+|.- ..--+=+|||.|+.++|.-|-.|.+.-|
T Consensus 185 ~e~A~lF~~llRalGi~aR~V~~--------~~~H~W~EV~~~~~~rWv~vDp~~~~id 235 (335)
T 1x3z_A 185 GEWCNLFTLILKSFGLDVRYVWN--------REDHVWCEYFSNFLNRWVHVDSCEQSFD 235 (335)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEE--------TTTEEEEEEEETTTTEEEEEETTTTEES
T ss_pred HHHHHHHHHHHHHCCCCeEEEec--------CCCcEEEEEEECCCCCEEEECCCCCccC
Confidence 55666777889999999999942 2234559999999999999999987766
No 270
>2xi5_A RNA polymerase L, L-protein; transferase, bunyaviridae, orthobunyavirus, aedes triseriatu hydrolase; 2.20A {Bunyavirus la crosse} PDB: 2xi7_A*
Probab=21.25 E-value=1.4e+02 Score=30.13 Aligned_cols=50 Identities=12% Similarity=0.195 Sum_probs=43.2
Q ss_pred ceEEEEEeEEEEEEEeCCCchHHHHHHHHHHHHHHHHHHHcCCceEEEEec
Q psy11602 70 IFRVHQFEKVEQFVLTSPHDDESWKMLDEMIQNSEEFYADLGIAYRVVNIV 120 (1083)
Q Consensus 70 L~R~rEF~~~e~~~~~~~~~e~s~~~~~~~~~~y~~if~~LgLpyrvv~~~ 120 (1083)
-+...++.++=-|-+..+. +++..++++..+....+|..|||||.+|-+-
T Consensus 82 Yii~~~~L~I~DyKVSVd~-~Ss~~T~~KY~~~i~~~~~~lgi~~EivIIR 131 (184)
T 2xi5_A 82 YLYINNVLYIIDYKVSVSN-ESSVITYDKYYELTRDISDRLSIPIEIVIIR 131 (184)
T ss_dssp EEEETTEEEEEEEEECSSS-HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred EEEECCEEEEEEEEEEecC-cchHHHHHHHHHHHHHHhhhcCCceEEEEEE
Confidence 3455568889999999999 7999999999999999999999999887554
No 271
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=21.01 E-value=22 Score=33.76 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=0.5
Q ss_pred CccccccCCCCCC-------------CCCcEEEcccCCccccccc
Q psy11602 691 ILVCCVCLGERSD-------------DVNEIVECDSCGVTVHEGC 722 (1083)
Q Consensus 691 ~~~C~VC~~~~~~-------------~~n~iv~Cd~C~i~VH~~C 722 (1083)
+..|+||+..-.+ .++..+.--.|+..+|..|
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~C 92 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHC 92 (117)
T ss_dssp C--------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHH
Confidence 4589999965332 1112223336888888888
No 272
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.95 E-value=58 Score=26.10 Aligned_cols=27 Identities=30% Similarity=0.644 Sum_probs=21.8
Q ss_pred CCCCCCCcccccccCC--CCCCceeecCC
Q psy11602 736 SSCSTEPWFCESCRAG--IAEPTCELCPN 762 (1083)
Q Consensus 736 ~~~~~~~W~Cd~C~~~--~~~~~C~LCp~ 762 (1083)
...+.+.|-|..|... .....|+-|..
T Consensus 5 fk~~~gsW~C~~C~v~N~a~~~kC~aC~~ 33 (47)
T 2ebr_A 5 SSGPEGSWDCELCLVQNKADSTKCLACES 33 (47)
T ss_dssp CSSCCSSCCCSSSCCCCCSSCSBCSSSCC
T ss_pred ccCCCCeeECCeeecCCcCCcceecCcCC
Confidence 4457899999999865 46789999976
No 273
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii}
Probab=20.77 E-value=1.4e+02 Score=35.50 Aligned_cols=82 Identities=12% Similarity=0.184 Sum_probs=51.4
Q ss_pred EEeeeEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHhCCc-EEEEecc--CCCcchhhhceeeEEEeeCCCCcEEeeecc
Q psy11602 311 HQFEKVEQFVLTSPHDDESWKTLDEMIQNSEEFYADLGIA-YRVVNIV--SGALNHAAAKKLDLEAWFPGSGAFRELVSC 387 (1083)
Q Consensus 311 hqf~kvE~f~~~~~~~~~s~~~~e~~~~~~e~~~~~L~lp-yRvv~~~--~~dl~~~a~~~~DiE~w~P~~~~y~Ev~S~ 387 (1083)
.||..++.+.+-.+. -|..+....+.|++.||++ +|+..-. ...+.+ .+...|.++.|+.+.|.||+.|
T Consensus 239 ~ef~qLaglv~G~~v------dF~DLKG~Le~ll~~LGi~~~rfrps~~~~p~yhP--Gr~AeI~v~~~g~~gw~eIG~~ 310 (549)
T 2du7_A 239 MSYHSASCVVVGEDV------SVDDGKVVAEGLLAQFGFTKFKFKPDEKKSKYYTP--ETQTEVYAYHPKLGEWIEVATF 310 (549)
T ss_dssp SCEEEEEEEEECTTC------CHHHHHHHHHHHHGGGTCCCCCCEECTTCCTTBCT--TTCEEEEECCSSSSCSEEEEEE
T ss_pred CcceEEEEEEECCCC------CHHHHHHHHHHHHHHcCCCeEEEEECCCCCcccCC--ceEEEEEEecCCCCCcEEEEEE
Confidence 699999988887643 2788999999999999984 5554310 011333 3334555544554467888877
Q ss_pred cCcccccccccce
Q psy11602 388 SNCLAYQSRRLLV 400 (1083)
Q Consensus 388 sn~~d~qarrl~i 400 (1083)
.-..=--.+.++|
T Consensus 311 GeVHP~VLk~~gI 323 (549)
T 2du7_A 311 GVYSPIALAKYNI 323 (549)
T ss_dssp EEBCHHHHHHTTC
T ss_pred EEECHHHHHHcCC
Confidence 6443333344555
No 274
>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A
Probab=20.54 E-value=5.1e+02 Score=29.59 Aligned_cols=82 Identities=17% Similarity=0.154 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHHc-CCc--eEEEEeccCCCCcccceeEeEEEEecCCCceeEEEEcCCCchhhhhcccceeccC
Q psy11602 92 SWKMLDEMIQNSEEFYADL-GIA--YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQT 168 (1083)
Q Consensus 92 s~~~~~~~~~~y~~if~~L-gLp--yrvv~~~sgdlg~~as~~~diE~~~P~~~~~~ev~s~s~cgdyqs~rl~i~y~~~ 168 (1083)
.+..|..+....+.|++.| |++ ++......- +.--+++. +++. .++|+|+.-|--.---..+.++|.
T Consensus 200 vd~~f~dlKg~le~ll~~lfg~~~~~~~~~~~~p--~~hPgr~a--~I~~--~g~wlE~lG~G~lhP~Vl~~~gl~---- 269 (415)
T 3cmq_A 200 VKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFP--FTHPSFEM--EINF--HGEWLEVLGCGVMEQQLVNSAGAQ---- 269 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEET--TEEEEEEE--EEEE--TTEEEEEEEEEEECHHHHHHTTCT----
T ss_pred ccccHHHHHHHHHHHHHHHcCCCceEEEecCCCC--CCCCceEE--EEEE--CCeeEEEEEEEEeCHHHHHHcCCC----
Confidence 3446788999999999997 986 655432211 11222333 3344 456776654422222234444442
Q ss_pred CCcc-ccccccchhhee
Q psy11602 169 KQKI-YATACATTRVIC 184 (1083)
Q Consensus 169 ~~~~-n~tg~a~~Rli~ 184 (1083)
..+ ...++...|++.
T Consensus 270 -~~vg~afel~le~l~~ 285 (415)
T 3cmq_A 270 -DRIGWAFGLGLERLAM 285 (415)
T ss_dssp -TEEEEEEEEEHHHHHH
T ss_pred -CcceEEEEEcHHHHhh
Confidence 113 445666677654
No 275
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.48 E-value=29 Score=30.33 Aligned_cols=32 Identities=28% Similarity=0.676 Sum_probs=26.1
Q ss_pred ccccccccccCCCCCCcceecCccCCCccccCCC
Q psy11602 1035 VLSHKCGLCHLSHDPHTMAKCDTCHLYYHLACLD 1068 (1083)
Q Consensus 1035 ~~~~~c~~C~~~~~~~~~~~Cd~C~~~yH~~Cl~ 1068 (1083)
.....|.||+..-.+. ..|.+|+..||..|+.
T Consensus 13 ~~i~~C~IC~~~i~~g--~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 13 DAVKICNICHSLLIQG--QSCETCGIRMHLPCVA 44 (74)
T ss_dssp SSSCBCSSSCCBCSSS--EECSSSCCEECHHHHH
T ss_pred CCCCcCcchhhHcccC--CccCCCCchhhHHHHH
Confidence 4567799998877643 5799999999999996
No 276
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=20.39 E-value=2e+02 Score=35.98 Aligned_cols=86 Identities=7% Similarity=0.039 Sum_probs=57.4
Q ss_pred eEecCChHHHHHHHhcccCCCCCCCceEeeeccccccccccCCCCCCCceEEEEEeEEEEEEEeCCCchHHHH------H
Q psy11602 22 YLIATSEQPICAVHRDSWLPEASLPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDDESWK------M 95 (1083)
Q Consensus 22 ~L~pTsE~~i~~l~~~~i~s~~~LPlklyqi~~~fR~E~~~~gk~trGL~R~rEF~~~e~~~~~~~~~e~s~~------~ 95 (1083)
+|++|-=-.+...++. .......|++++-++.+||.+.. ..+ . +||.++......... ++.|. -
T Consensus 548 vLRtsLlpgLL~~l~~-N~~r~~~~vrlFEiG~Vf~~d~~---~~~----~-~e~~~la~l~~G~~~-~~~w~~~~~~~d 617 (795)
T 2rhq_B 548 TLRQSLLPHLIEATAY-NVARKNKDVRLYEIGRVFFGNGE---GEL----P-DEVEYLSGILTGEYV-VNAWQGKKEEID 617 (795)
T ss_dssp EECSCSHHHHHHHHHH-HHHTTCCCEEEEEEEEEEECCCT---TSC----C-EEEEEEEEEEESEEE-EEGGGTEEEECC
T ss_pred hhhhccHHHHHHHHHH-HhcCCCCCeEEEEEeeEEecCCc---ccC----c-chhhEEEEEEEeccc-cccccCCCCCCC
Confidence 5665544444444332 23455789999999999995431 111 1 899888877776543 22332 5
Q ss_pred HHHHHHHHHHHHHHcCCceEEE
Q psy11602 96 LDEMIQNSEEFYADLGIAYRVV 117 (1083)
Q Consensus 96 ~~~~~~~y~~if~~LgLpyrvv 117 (1083)
|..+....+.|++.||++++..
T Consensus 618 F~dlKg~le~ll~~lG~~~~~~ 639 (795)
T 2rhq_B 618 FFIAKGVVDRVAEKLNLEFSYK 639 (795)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEE
Confidence 8889999999999999986654
No 277
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=20.30 E-value=45 Score=37.65 Aligned_cols=36 Identities=31% Similarity=0.690 Sum_probs=27.7
Q ss_pred CCCccccccCCCCCC-CCCcEEEcc--cCCccccccccc
Q psy11602 689 SKILVCCVCLGERSD-DVNEIVECD--SCGVTVHEGCYG 724 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~-~~n~iv~Cd--~C~i~VH~~CYG 724 (1083)
+....|+||.....+ ..-+-..|+ .|+..+|..|.-
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~ 344 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLE 344 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGH
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHH
Confidence 345689999987665 334567899 799999999963
No 278
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=20.19 E-value=65 Score=27.29 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=22.5
Q ss_pred CCCccccccCCCCCCCCCcEEEcccCCccccccccc
Q psy11602 689 SKILVCCVCLGERSDDVNEIVECDSCGVTVHEGCYG 724 (1083)
Q Consensus 689 ~~~~~C~VC~~~~~~~~n~iv~Cd~C~i~VH~~CYG 724 (1083)
.+...|.||+..-.. ... +.--.|+..+|..|..
T Consensus 13 ~~~~~C~IC~~~~~~-~~~-~~~~~C~H~fc~~Ci~ 46 (78)
T 2ect_A 13 GSGLECPVCKEDYAL-GES-VRQLPCNHLFHDSCIV 46 (78)
T ss_dssp SSSCCCTTTTSCCCT-TSC-EEECTTSCEEETTTTH
T ss_pred CCCCCCeeCCccccC-CCC-EEEeCCCCeecHHHHH
Confidence 456799999965332 223 2233599999999954
Done!