Query psy11606
Match_columns 111
No_of_seqs 35 out of 37
Neff 3.2
Searched_HMMs 13730
Date Fri Aug 16 22:58:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11606.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11606hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ik7a_ a.77.1.2 (A:) Pelle de 70.5 6.4 0.00047 23.4 5.5 37 48-98 9-45 (52)
2 d1iufa1 a.4.1.7 (A:-2-75) Ars- 46.5 1.1 8.1E-05 28.8 -1.2 54 16-75 15-68 (78)
3 d2akja1 d.58.36.1 (A:346-430) 38.5 4.6 0.00034 24.6 0.9 29 41-77 31-59 (85)
4 d1aopa1 d.58.36.1 (A:81-145) S 24.8 17 0.0013 20.8 1.8 16 41-56 11-26 (65)
5 d1g8ma1 c.24.1.3 (A:4-200) IMP 23.5 89 0.0065 21.9 5.9 40 28-67 143-194 (197)
6 d2ouxa1 a.118.26.1 (A:6-135) M 18.9 42 0.0031 20.6 2.9 25 25-49 98-122 (130)
7 d1nvpd1 a.32.1.1 (D:3-53) Smal 17.5 35 0.0026 19.8 2.0 14 54-67 36-49 (51)
8 d1zcza1 c.24.1.3 (A:1-157) IMP 15.8 94 0.0068 20.9 4.3 36 29-64 115-154 (157)
9 d1zj8a1 d.58.36.1 (A:327-406) 15.7 35 0.0026 19.7 1.8 30 41-78 27-56 (80)
10 d2v4jb2 d.58.36.2 (B:2-135) Di 12.2 46 0.0034 22.3 1.8 19 41-59 72-90 (134)
No 1
>d1ik7a_ a.77.1.2 (A:) Pelle death domain {Drosophila melanogaster [TaxId: 7227]}
Probab=70.48 E-value=6.4 Score=23.38 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11606 48 KLALLGDQYEQSIAEMLQKQSIRLDESQEVECHHLKERLHYELEILMAYQS 98 (111)
Q Consensus 48 KlA~L~eQYe~sI~em~~~q~~rLde~Qe~E~~~L~~~Lq~ElelL~aYQs 98 (111)
-|.+-|+||+.||.|++--- -++++.+-|.+|..|=+
T Consensus 9 lL~~Wg~q~NHTi~eLF~ll--------------~~mk~~~aM~iiK~~V~ 45 (52)
T d1ik7a_ 9 FLNIWGGQYNHTVQTLFALF--------------KKLKLHNAMRLIKDYVS 45 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCcccccHHHHHHHH--------------HHHHHHHHHHHHHHHcC
Confidence 46677899999999998654 35677888888888754
No 2
>d1iufa1 a.4.1.7 (A:-2-75) Ars-binding protein 1, ABP1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=46.45 E-value=1.1 Score=28.79 Aligned_cols=54 Identities=15% Similarity=0.323 Sum_probs=40.2
Q ss_pred hhHHHHHHHHhhcCChHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhH
Q psy11606 16 RQYKALKAQMLATASKEDQKTVIKKLKQDQRRKLALLGDQYEQSIAEMLQKQSIRLDESQ 75 (111)
Q Consensus 16 rQyKal~~q~l~~~Pk~~~k~vlk~lKeEq~RKlA~L~eQYe~sI~em~~~q~~rLde~Q 75 (111)
-|-+|||.+-.+..|+--|+++++=+.+.=..+++. .||++.|++.-..||+..
T Consensus 15 ~qK~ALR~~~~~~~~~~sqk~l~~WFe~~y~q~Isq------ssVS~iLS~ky~~LD~~~ 68 (78)
T d1iufa1 15 HEKRALRHYFFQLQNRSGQQDLIEWFREKFGKDISQ------PSVSQILSSKYSYLDNTV 68 (78)
T ss_dssp HHHHHHHHHHHSSSSCCCHHHHHHHHHHHHSSCCSS------SSTTHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHhcCCCccHHHHHHHHHHHHCCcchH------HHHHHHhhhHHHHhcccc
Confidence 477999999999999999999987665433333322 356788888888888643
No 3
>d2akja1 d.58.36.1 (A:346-430) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=38.50 E-value=4.6 Score=24.60 Aligned_cols=29 Identities=31% Similarity=0.517 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHH
Q psy11606 41 LKQDQRRKLALLGDQYEQSIAEMLQKQSIRLDESQEV 77 (111)
Q Consensus 41 lKeEq~RKlA~L~eQYe~sI~em~~~q~~rLde~Qe~ 77 (111)
+..+|.+.+|.+++.| ....+|++.+|..
T Consensus 31 lt~~ql~~la~ia~~y--------g~g~irlTtrQni 59 (85)
T d2akja1 31 LQADEMEELARIADVY--------GSGELRLTVEQNI 59 (85)
T ss_dssp ECHHHHHHHHHHHHHH--------SSSEEEEETTTEE
T ss_pred eCHHHHHHHHHHHHHH--------CCCcEEECCCCcE
Confidence 5678999999988888 4556788877753
No 4
>d1aopa1 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]}
Probab=24.78 E-value=17 Score=20.81 Aligned_cols=16 Identities=6% Similarity=0.188 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHHH
Q psy11606 41 LKQDQRRKLALLGDQY 56 (111)
Q Consensus 41 lKeEq~RKlA~L~eQY 56 (111)
+..+|.+.+|.+++.|
T Consensus 11 it~~ql~~la~ia~ky 26 (65)
T d1aopa1 11 ITTKQWQAIDKFAGEN 26 (65)
T ss_dssp EEHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHh
Confidence 4678999999999988
No 5
>d1g8ma1 c.24.1.3 (A:4-200) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.50 E-value=89 Score=21.87 Aligned_cols=40 Identities=30% Similarity=0.536 Sum_probs=31.6
Q ss_pred cCChHHHHHHHHHhH--------HHHHHHHHHHH----HHHHHHHHHHHHHh
Q psy11606 28 TASKEDQKTVIKKLK--------QDQRRKLALLG----DQYEQSIAEMLQKQ 67 (111)
Q Consensus 28 ~~Pk~~~k~vlk~lK--------eEq~RKlA~L~----eQYe~sI~em~~~q 67 (111)
.+.++|+..+++.|. .+.+++||.-| ..||..|++-+..+
T Consensus 143 l~dP~dY~~~i~~l~~~~~~~~s~~~Rk~LA~kAF~~Ta~YD~~Ia~yf~~~ 194 (197)
T d1g8ma1 143 VCDPADYSSVAKEMAASKDKDTSVETRRHLALKAFTHTAQYDAAISDYFRKE 194 (197)
T ss_dssp ECCGGGHHHHHHHHHTSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355789999988874 36789999866 67999999988654
No 6
>d2ouxa1 a.118.26.1 (A:6-135) Magnesium transporter MgtE {Enterococcus faecalis [TaxId: 1351]}
Probab=18.93 E-value=42 Score=20.62 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=14.2
Q ss_pred HhhcCChHHHHHHHHHhHHHHHHHH
Q psy11606 25 MLATASKEDQKTVIKKLKQDQRRKL 49 (111)
Q Consensus 25 ~l~~~Pk~~~k~vlk~lKeEq~RKl 49 (111)
+|+.+|.+..+.||..|..+.+..+
T Consensus 98 ll~~L~~~~~~~iL~~l~~~~r~~i 122 (130)
T d2ouxa1 98 LLNMLDKSQKAKYLSLLSSEEAGEI 122 (130)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHCCHHHHHHHHHcCCHHHHHHH
Confidence 4455566666666666655555444
No 7
>d1nvpd1 a.32.1.1 (D:3-53) Small chain TOA2, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.52 E-value=35 Score=19.76 Aligned_cols=14 Identities=21% Similarity=0.451 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHh
Q psy11606 54 DQYEQSIAEMLQKQ 67 (111)
Q Consensus 54 eQYe~sI~em~~~q 67 (111)
.||+++|++-+...
T Consensus 36 ~qFDk~i~~aL~~~ 49 (51)
T d1nvpd1 36 LQFDKAINAALAQR 49 (51)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 68999999988764
No 8
>d1zcza1 c.24.1.3 (A:1-157) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]}
Probab=15.84 E-value=94 Score=20.91 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=29.0
Q ss_pred CChHHHHHHHHHhHHHHHHHHHHHH----HHHHHHHHHHH
Q psy11606 29 ASKEDQKTVIKKLKQDQRRKLALLG----DQYEQSIAEML 64 (111)
Q Consensus 29 ~Pk~~~k~vlk~lKeEq~RKlA~L~----eQYe~sI~em~ 64 (111)
+-.++.+.++..+..+.+++||.-| ..||..|+.-+
T Consensus 115 ~d~~~y~~~ie~~~~e~Rk~LA~kAF~~TA~YD~~IanyF 154 (157)
T d1zcza1 115 FDMETLKLAIEIDDEETRKYLAGMTFAFTSVYDSIRANQF 154 (157)
T ss_dssp CSHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4467888888888899999999844 47999998765
No 9
>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=15.67 E-value=35 Score=19.67 Aligned_cols=30 Identities=17% Similarity=0.089 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHH
Q psy11606 41 LKQDQRRKLALLGDQYEQSIAEMLQKQSIRLDESQEVE 78 (111)
Q Consensus 41 lKeEq~RKlA~L~eQYe~sI~em~~~q~~rLde~Qe~E 78 (111)
+..++.+.+|.+++.| ..-.++++.+|..+
T Consensus 27 it~~ql~~la~ia~~y--------g~g~i~lTtrq~l~ 56 (80)
T d1zj8a1 27 VSGTILTAVADLMARA--------GSDRIRFTPYQKLV 56 (80)
T ss_dssp EEHHHHHHHHHHHHHH--------TCCCEEECTTSCEE
T ss_pred ECHHHHHHHHHHHHHh--------CCCeEEECCCCcEE
Confidence 4678999999988877 34456777766543
No 10
>d2v4jb2 d.58.36.2 (B:2-135) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]}
Probab=12.21 E-value=46 Score=22.26 Aligned_cols=19 Identities=16% Similarity=0.329 Sum_probs=15.1
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy11606 41 LKQDQRRKLALLGDQYEQS 59 (111)
Q Consensus 41 lKeEq~RKlA~L~eQYe~s 59 (111)
|..++-|++|.+|+.|-.-
T Consensus 72 lS~~~lR~iadIAdkYg~G 90 (134)
T d2v4jb2 72 MSITHIREMCDIADKYCGG 90 (134)
T ss_dssp EEHHHHHHHHHHHHHHSTT
T ss_pred cCHHHHHHHHHHHHHHCCC
Confidence 3568899999999988543
Done!