Query psy11608
Match_columns 99
No_of_seqs 103 out of 1043
Neff 6.9
Searched_HMMs 13730
Date Fri Aug 16 23:00:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11608.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11608hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 99.7 6.5E-17 4.7E-21 108.7 12.0 93 2-96 32-137 (183)
2 d2f9da1 d.58.7.1 (A:12-125) Pr 99.5 1.2E-14 8.9E-19 92.0 3.6 77 2-82 33-109 (114)
3 d2cq3a1 d.58.7.1 (A:110-202) R 99.4 2.3E-13 1.7E-17 83.6 8.2 55 2-56 37-92 (93)
4 d1b7fa1 d.58.7.1 (A:123-204) S 99.4 9.7E-14 7.1E-18 83.1 6.0 51 2-52 28-81 (82)
5 d1fxla1 d.58.7.1 (A:37-118) Hu 99.4 1.7E-13 1.2E-17 81.9 6.7 51 2-52 28-81 (82)
6 d1cvja2 d.58.7.1 (A:91-179) Po 99.4 1.3E-13 9.6E-18 84.0 6.3 53 2-54 34-87 (89)
7 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.4 4.8E-13 3.5E-17 81.6 8.7 54 2-55 34-88 (90)
8 d1cvja1 d.58.7.1 (A:11-90) Pol 99.4 1.7E-13 1.2E-17 82.0 6.1 50 2-51 26-78 (80)
9 d1no8a_ d.58.7.1 (A:) Nuclear 99.4 3.8E-13 2.8E-17 80.2 7.5 50 2-51 26-77 (78)
10 d2cq0a1 d.58.7.1 (A:231-320) E 99.4 3E-13 2.2E-17 82.6 7.0 53 2-54 34-89 (90)
11 d2u2fa_ d.58.7.1 (A:) Splicing 99.4 4E-13 2.9E-17 81.4 6.2 53 2-54 27-82 (85)
12 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.4 3.8E-13 2.8E-17 81.9 6.1 51 2-52 33-86 (88)
13 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.4 8.6E-13 6.3E-17 81.7 7.6 51 2-55 44-94 (96)
14 d2cqba1 d.58.7.1 (A:1-89) Pept 99.4 5.5E-13 4E-17 81.2 5.8 53 2-54 31-86 (89)
15 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.4 1.2E-12 9.1E-17 80.4 7.3 52 2-53 40-91 (95)
16 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.3 6.3E-13 4.6E-17 81.7 5.7 53 2-54 35-90 (93)
17 d1whwa_ d.58.7.1 (A:) Probable 99.3 1.6E-12 1.1E-16 80.4 7.3 52 2-53 34-88 (99)
18 d2cpza1 d.58.7.1 (A:383-484) C 99.3 7.3E-13 5.3E-17 82.6 5.5 54 2-55 44-100 (102)
19 d2cpfa1 d.58.7.1 (A:362-446) P 99.3 7.9E-13 5.8E-17 79.6 5.4 51 2-52 24-80 (85)
20 d2ghpa3 d.58.7.1 (A:206-291) U 99.3 1.7E-12 1.2E-16 78.6 6.9 52 2-54 31-86 (86)
21 d1nu4a_ d.58.7.1 (A:) Spliceso 99.3 4.3E-13 3.1E-17 82.0 4.2 53 2-54 33-85 (91)
22 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.3 1.4E-12 1E-16 80.1 6.1 52 2-53 33-87 (93)
23 d2cpia1 d.58.7.1 (A:101-189) E 99.3 4.9E-12 3.5E-16 77.1 7.6 47 2-48 37-89 (89)
24 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.3 1.1E-12 8.1E-17 79.7 4.6 54 2-55 31-87 (90)
25 d2ghpa1 d.58.7.1 (A:116-196) U 99.3 2.4E-12 1.7E-16 76.8 5.9 42 12-53 40-81 (81)
26 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.3 2.4E-12 1.7E-16 77.1 5.8 48 7-54 30-80 (83)
27 d2cqca1 d.58.7.1 (A:109-191) A 99.3 3.8E-12 2.8E-16 76.2 6.6 46 2-47 35-83 (83)
28 d2cpha1 d.58.7.1 (A:454-547) P 99.3 3E-12 2.2E-16 78.7 6.2 53 2-54 34-91 (94)
29 d1wf2a_ d.58.7.1 (A:) Heteroge 99.3 3.8E-12 2.7E-16 79.0 6.3 47 2-53 42-88 (98)
30 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.3 2.2E-12 1.6E-16 76.9 4.8 50 2-54 29-78 (79)
31 d2cqca1 d.58.7.1 (A:109-191) A 99.3 2.9E-12 2.1E-16 76.8 5.1 46 51-97 5-50 (83)
32 d1fxla2 d.58.7.1 (A:119-203) H 99.3 2.7E-12 1.9E-16 77.5 4.9 44 53-97 4-47 (85)
33 d2cqga1 d.58.7.1 (A:96-185) TA 99.3 2.8E-12 2E-16 78.6 5.0 44 53-97 6-49 (90)
34 d1b7fa2 d.58.7.1 (A:205-289) S 99.3 5.3E-12 3.9E-16 76.0 6.2 46 51-97 2-47 (85)
35 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=6.5e-17 Score=108.71 Aligned_cols=93 Identities=20% Similarity=0.237 Sum_probs=76.0
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecC----------CCCceEEEEcCCCCCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGK----------SLATTCVWVDGVAGKCG 68 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k----------~~~~~~lfVg~l~~~~s 68 (99)
+|+++.+.++. .++|||||.|.+.++|++|+.. .+..+..+.+.+.... ..+.++|||+|||.+++
T Consensus 32 ~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~V~~lp~~~t 110 (183)
T d1u1qa_ 32 TLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTE 110 (183)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEETTEECEEEECCCTTGGGSTTTTCCCSEEEEECCCTTCC
T ss_pred CEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCcccccchhhhhhhhcccccccccccccceeEEccCCCcCC
Confidence 58899998874 7899999999999999999986 4555667666654322 23467899999999999
Q ss_pred hHHHHhhhcCCCceeeeeEEEEcCCCCC
Q psy11608 69 TGEHNRVNLGYGKSLATTCVWVDGVAGK 96 (99)
Q Consensus 69 ~~~L~~~F~~fG~i~~~~~v~~d~~~g~ 96 (99)
+++|+++|+.||.|..+ .+..|+.+|+
T Consensus 111 e~~L~~~f~~~G~v~~~-~i~~~~~~~~ 137 (183)
T d1u1qa_ 111 EHHLRDYFEQYGKIEVI-EIMTDRGSGK 137 (183)
T ss_dssp HHHHHHHHGGGSCEEEE-EEEECTTTCC
T ss_pred HHHHhhhhccCCceeee-eeecccccCc
Confidence 99999999999999875 5668888775
No 2
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=1.2e-14 Score=91.96 Aligned_cols=77 Identities=16% Similarity=0.159 Sum_probs=62.9
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCCc
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGK 81 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~ 81 (99)
+|.+|.+.+++.++|||||+|.+.++|..|++.|||..+.|++|+|.++++.... ........++.++++.++||.
T Consensus 33 ~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~~~~----~~~~~~~~~~~~~~~~~~~g~ 108 (114)
T d2f9da1 33 PIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAF----QKMDTKKKEEQLKLLKEKYGI 108 (114)
T ss_dssp CEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHHHHT----TTSCHHHHHHHHHHHHHHHCC
T ss_pred CeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCchh----hhhHHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999999999999999999999999997642110 123333457888888888885
Q ss_pred e
Q psy11608 82 S 82 (99)
Q Consensus 82 i 82 (99)
-
T Consensus 109 ~ 109 (114)
T d2f9da1 109 N 109 (114)
T ss_dssp C
T ss_pred C
Confidence 3
No 3
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=2.3e-13 Score=83.62 Aligned_cols=55 Identities=20% Similarity=0.316 Sum_probs=49.9
Q ss_pred ceEEEEEeeCC-CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCCce
Q psy11608 2 VMYFVDIKKQS-SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLATT 56 (99)
Q Consensus 2 ~I~~v~ik~~~-~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~~~ 56 (99)
+|.+|.+..+. .++|||||+|.++++|++|++.|||..++|++|+|.|+++.+.+
T Consensus 37 ~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~~r~~t 92 (93)
T d2cq3a1 37 KILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 92 (93)
T ss_dssp CEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECCSSCCC
T ss_pred eeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecCcCCCC
Confidence 68889888876 68999999999999999999999999999999999999886543
No 4
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.43 E-value=9.7e-14 Score=83.08 Aligned_cols=51 Identities=22% Similarity=0.427 Sum_probs=46.8
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
+|.+|.|.++. +++|||||+|.++++|++|++.|||..+++++|+|.|+++
T Consensus 28 ~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 28 PINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 68889887763 7899999999999999999999999999999999999875
No 5
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.7e-13 Score=81.91 Aligned_cols=51 Identities=14% Similarity=0.384 Sum_probs=47.3
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
+|.+|.|.++. +++|||||+|.++++|++|++.|||..+++++|+|.|++|
T Consensus 28 ~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 28 EIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 58899998774 7899999999999999999999999999999999999875
No 6
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.3e-13 Score=84.03 Aligned_cols=53 Identities=19% Similarity=0.317 Sum_probs=48.6
Q ss_pred ceEEEEEeeCC-CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQS-SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~-~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
.|.++.|+.+. .++|||||+|.+.++|++|+++|||..++|++|+|.++++.+
T Consensus 34 ~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~ 87 (89)
T d1cvja2 34 NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 87 (89)
T ss_dssp CEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTT
T ss_pred CceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 58889998875 789999999999999999999999999999999999998654
No 7
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=4.8e-13 Score=81.61 Aligned_cols=54 Identities=15% Similarity=0.300 Sum_probs=49.2
Q ss_pred ceEEEEEeeCC-CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCCc
Q psy11608 2 VMYFVDIKKQS-SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLAT 55 (99)
Q Consensus 2 ~I~~v~ik~~~-~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~~ 55 (99)
+|.+|.|.++. .++|||||+|.+.++|++|++.|||..++|++|+|.|+++.++
T Consensus 34 ~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~~~~ 88 (90)
T d2cqia1 34 PCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSS 88 (90)
T ss_dssp CEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCCTTC
T ss_pred CceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCCC
Confidence 68899988875 6899999999999999999999999999999999999986554
No 8
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.7e-13 Score=82.03 Aligned_cols=50 Identities=14% Similarity=0.310 Sum_probs=46.5
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGK 51 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k 51 (99)
+|.+|.|.+|+ +++|||||+|.++++|++|++.|||..++|++|+|.|++
T Consensus 26 ~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 26 PILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred CEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 68899999875 678999999999999999999999999999999999985
No 9
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.41 E-value=3.8e-13 Score=80.20 Aligned_cols=50 Identities=14% Similarity=0.175 Sum_probs=46.3
Q ss_pred ceEEEEEeeCC--CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecC
Q psy11608 2 VMYFVDIKKQS--SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGK 51 (99)
Q Consensus 2 ~I~~v~ik~~~--~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k 51 (99)
+|.+|.|..+. +++|||||+|.++++|++|++.|||..++|++|+|.++.
T Consensus 26 ~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 26 TLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp CEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred CCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 68899998764 899999999999999999999999999999999999875
No 10
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=3e-13 Score=82.56 Aligned_cols=53 Identities=19% Similarity=0.322 Sum_probs=48.3
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
+|.+|.|.+|. +++|||||+|.+.++|++|++.|||..+++++|+|.|+++..
T Consensus 34 ~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~akp~~ 89 (90)
T d2cq0a1 34 SISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPST 89 (90)
T ss_dssp CEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESSCCC
T ss_pred ccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeeeCCC
Confidence 58889888774 689999999999999999999999999999999999998653
No 11
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=4e-13 Score=81.37 Aligned_cols=53 Identities=19% Similarity=0.344 Sum_probs=48.6
Q ss_pred ceEEEEEeeC---CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQ---SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~---~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
+|.+|.|.+| ++++|||||+|.++++|++|++.|||..+++++|+|.|+++.+
T Consensus 27 ~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~~ 82 (85)
T d2u2fa_ 27 PLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 82 (85)
T ss_dssp CEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCCC
T ss_pred ccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 6899999887 4889999999999999999999999999999999999987653
No 12
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.38 E-value=3.8e-13 Score=81.87 Aligned_cols=51 Identities=12% Similarity=0.238 Sum_probs=46.9
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
.|.+|.|.+|+ +++|||||+|.+.++|++|++.|||..++|++|+|.|+.+
T Consensus 33 ~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~~ 86 (88)
T d1rk8a_ 33 EIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFV 86 (88)
T ss_dssp CEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESEE
T ss_pred CcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEecC
Confidence 58899988874 6899999999999999999999999999999999999864
No 13
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=8.6e-13 Score=81.67 Aligned_cols=51 Identities=16% Similarity=0.330 Sum_probs=46.8
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCCc
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLAT 55 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~~ 55 (99)
+|.+|.|.++ +|||||+|.+.++|+.|++.|||..+++++|+|.|+++.|+
T Consensus 44 ~i~~v~i~~~---kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p~ 94 (96)
T d1x4ga1 44 QIMEIRVFPE---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 94 (96)
T ss_dssp CEEEEEEETT---TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCCS
T ss_pred CceEEEEEec---ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCC
Confidence 5788888764 89999999999999999999999999999999999998764
No 14
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=5.5e-13 Score=81.19 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=47.7
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
+|.+|.|.+|. +++|||||+|.+.++|++|++.|||..++|++|+|.++++..
T Consensus 31 ~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p~~ 86 (89)
T d2cqba1 31 DITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMR 86 (89)
T ss_dssp CCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred eEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCCCC
Confidence 57788887764 899999999999999999999999999999999999998653
No 15
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=1.2e-12 Score=80.44 Aligned_cols=52 Identities=23% Similarity=0.354 Sum_probs=48.8
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
+|..+.++++..++|||||+|.+.++|+.|++.|||..+.+++|+|.|+++.
T Consensus 40 ~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 91 (95)
T d1x4aa1 40 AIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSG 91 (95)
T ss_dssp CEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred ceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccCC
Confidence 5788999998999999999999999999999999999999999999998764
No 16
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=6.3e-13 Score=81.69 Aligned_cols=53 Identities=11% Similarity=0.152 Sum_probs=48.2
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
+|.+|.|.++. .++|||||+|.+.++|++|++.|||..+++++|+|.|+++..
T Consensus 35 ~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~~~ 90 (93)
T d1x5ua1 35 PVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHN 90 (93)
T ss_dssp CEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTTTS
T ss_pred CccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCC
Confidence 58889887764 799999999999999999999999999999999999997654
No 17
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.34 E-value=1.6e-12 Score=80.44 Aligned_cols=52 Identities=17% Similarity=0.172 Sum_probs=47.5
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
+|.+|.|.+|. +++|||||+|.+.++|++|++.|||..+++++|+|.++++.
T Consensus 34 ~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~~~ 88 (99)
T d1whwa_ 34 PLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIK 88 (99)
T ss_dssp CEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECCCC
T ss_pred CceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 58899998764 89999999999999999999999999999999999998754
No 18
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=7.3e-13 Score=82.64 Aligned_cols=54 Identities=20% Similarity=0.334 Sum_probs=47.4
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCCc
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLAT 55 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~~ 55 (99)
+|.++.+..+. +++|||||+|.+.++|++|+++|||..+++++|+|.|+++...
T Consensus 44 ~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~~k~~ 100 (102)
T d2cpza1 44 NVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKND 100 (102)
T ss_dssp CCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCCCSCC
T ss_pred cccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeCCCCC
Confidence 46677777663 7899999999999999999999999999999999999987654
No 19
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.33 E-value=7.9e-13 Score=79.57 Aligned_cols=51 Identities=18% Similarity=0.382 Sum_probs=45.4
Q ss_pred ceEEEEEeeCC------CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQS------SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~------~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
+|.+|.|.++. .|+|||||+|.+.++|++|++.|||..++|++|+|.+++.
T Consensus 24 ~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 24 AIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp CEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 57888887763 3689999999999999999999999999999999999764
No 20
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.33 E-value=1.7e-12 Score=78.60 Aligned_cols=52 Identities=17% Similarity=0.323 Sum_probs=45.5
Q ss_pred ceEEEEEeeC----CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQ----SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~----~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
.|++|.|.++ ++++|||||+|.+.++|++|++ |||..++|++|+|.++++.|
T Consensus 31 ~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~a~~kP 86 (86)
T d2ghpa3 31 SIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSLADKKP 86 (86)
T ss_dssp CEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEECCCCC
T ss_pred hccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEEcCCCC
Confidence 5888887543 3789999999999999999995 99999999999999998765
No 21
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=4.3e-13 Score=81.99 Aligned_cols=53 Identities=19% Similarity=0.305 Sum_probs=48.8
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
.|.+|.+++.++++|||||+|.+.++|.+|++.|||..+++++|+|.|+++.+
T Consensus 33 ~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ak~~~ 85 (91)
T d1nu4a_ 33 QILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDS 85 (91)
T ss_dssp CEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEECSSCC
T ss_pred cccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeCCCc
Confidence 57888888877899999999999999999999999999999999999998654
No 22
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=1.4e-12 Score=80.07 Aligned_cols=52 Identities=19% Similarity=0.325 Sum_probs=47.3
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
+|.+|.|.++. +++|||||+|.+.++|+.|++.|||..+++++|+|.|+.+.
T Consensus 33 ~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~~~ 87 (93)
T d1h2vz_ 33 DIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGF 87 (93)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEESCC
T ss_pred CcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 68899998874 78999999999999999999999999999999999997643
No 23
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.30 E-value=4.9e-12 Score=77.11 Aligned_cols=47 Identities=21% Similarity=0.291 Sum_probs=42.3
Q ss_pred ceEEEEEeeCC------CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEe
Q psy11608 2 VMYFVDIKKQS------SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLG 48 (99)
Q Consensus 2 ~I~~v~ik~~~------~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~ 48 (99)
+|.+|.|.+++ .++|||||+|.++++|++|++.|||..++|++||++
T Consensus 37 ~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lkvS 89 (89)
T d2cpia1 37 KIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKAS 89 (89)
T ss_dssp CEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred CceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEEEC
Confidence 68999998875 345899999999999999999999999999999874
No 24
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=1.1e-12 Score=79.68 Aligned_cols=54 Identities=22% Similarity=0.343 Sum_probs=47.2
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCCc
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLAT 55 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~~ 55 (99)
+|.+|.+.++. .++|||||+|.++++|++|++.|||..++|++|+|.++.+.++
T Consensus 31 ~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~~~~ 87 (90)
T d1x5sa1 31 QISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSD 87 (90)
T ss_dssp CCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEECCCC
T ss_pred cccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCCC
Confidence 57778777653 7999999999999999999999999999999999999876543
No 25
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.29 E-value=2.4e-12 Score=76.78 Aligned_cols=42 Identities=12% Similarity=0.221 Sum_probs=37.4
Q ss_pred CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 12 SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 12 ~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
++++|||||+|.+.++|++|++.|||..+.|++|+|.+++|.
T Consensus 40 ~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P~ 81 (81)
T d2ghpa1 40 NTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNPL 81 (81)
T ss_dssp ---CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCCC
T ss_pred ccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccCc
Confidence 489999999999999999999999999999999999998763
No 26
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=2.4e-12 Score=77.09 Aligned_cols=48 Identities=19% Similarity=0.492 Sum_probs=42.2
Q ss_pred EEeeC---CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 7 DIKKQ---SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 7 ~ik~~---~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
.|.++ ++++|||||+|.++++|++|++.|||..+++++|+|.++.+.+
T Consensus 30 ~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 30 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred EEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 44444 3789999999999999999999999999999999999987653
No 27
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=3.8e-12 Score=76.24 Aligned_cols=46 Identities=20% Similarity=0.311 Sum_probs=42.4
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEE
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNL 47 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v 47 (99)
+|.+|.|.++. +++|||||+|.+.++|++|+++|||..++|++|+|
T Consensus 35 ~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 35 PIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 68899998774 78999999999999999999999999999999986
No 28
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.28 E-value=3e-12 Score=78.73 Aligned_cols=53 Identities=19% Similarity=0.297 Sum_probs=46.9
Q ss_pred ceEEEEEeeC----CCCCCeEEEEeCCHHHHHHHHHhh-CCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQ----SSASAFAFVQYTDIASVVRAMRAM-DGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~----~~s~gfaFV~F~~~~~a~~Ai~~m-~G~~i~~~~i~v~~~k~~~ 54 (99)
+|.+|.|.++ ++++|||||+|.++++|++|++.| ||..+.|++|+|.|+++..
T Consensus 34 ~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~A~~~~ 91 (94)
T d2cpha1 34 ELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEV 91 (94)
T ss_dssp CEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEECCCCC
T ss_pred CceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEEcCCCC
Confidence 5788888554 378999999999999999999998 8999999999999997653
No 29
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=3.8e-12 Score=79.04 Aligned_cols=47 Identities=19% Similarity=0.330 Sum_probs=42.9
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
+|.+|.|+ +|||||+|.+.++|++|+++|||..+.+++|+|.+++..
T Consensus 42 ~i~~~~i~-----rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 88 (98)
T d1wf2a_ 42 KIVGCSVH-----KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEP 88 (98)
T ss_dssp CEEEEEEE-----TEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSC
T ss_pred CEEEEEEe-----CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 57888885 699999999999999999999999999999999998653
No 30
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=2.2e-12 Score=76.91 Aligned_cols=50 Identities=16% Similarity=0.296 Sum_probs=44.7
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
.|.+|.+.+ ++|||||+|.+.++|.+|+++|||..+.|++|+|.|+++.|
T Consensus 29 ~I~~v~~~~---~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~P 78 (79)
T d2bz2a1 29 NIIDLSMDP---PRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQP 78 (79)
T ss_dssp CCSCEEEET---TTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSSC
T ss_pred ccceeeecc---CCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCCC
Confidence 466777764 58999999999999999999999999999999999998765
No 31
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=2.9e-12 Score=76.79 Aligned_cols=46 Identities=15% Similarity=0.145 Sum_probs=40.2
Q ss_pred CCCCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 51 KSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 51 k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.+.|+++|||+|||.++++++|+++|++||+|.++ .+..|+.+|++
T Consensus 5 ~p~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v-~i~~~~~~~~~ 50 (83)
T d2cqca1 5 NPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADV-SIVYDQQSRRS 50 (83)
T ss_dssp SCCGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEE-EEEECSSSSSE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccc-ccccccccccc
Confidence 35567899999999999999999999999999876 56689988874
No 32
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=2.7e-12 Score=77.54 Aligned_cols=44 Identities=20% Similarity=0.392 Sum_probs=38.3
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
..+++|||||||+++++++|+++|++||+|.++ .++.|+.+|++
T Consensus 4 ~k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v-~i~~d~~~g~~ 47 (85)
T d1fxla2 4 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITS-RILVDQVTGVS 47 (85)
T ss_dssp GTTCEEEEESCCTTCCHHHHHHHHGGGSCEEEE-EEEECTTTCCE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCcccc-ccccccccccC
Confidence 346789999999999999999999999999876 56689888764
No 33
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=2.8e-12 Score=78.60 Aligned_cols=44 Identities=20% Similarity=0.120 Sum_probs=39.5
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.++++|||+|||.++|+++|+++|++||+|.++ .+..|+.+|++
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v-~i~~d~~tg~s 49 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMV-QVKKDLKTGHS 49 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEE-EEEECSSSCSE
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhccccee-eeccCCCCccc
Confidence 356889999999999999999999999999886 66699999875
No 34
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.26 E-value=5.3e-12 Score=75.99 Aligned_cols=46 Identities=15% Similarity=0.268 Sum_probs=40.1
Q ss_pred CCCCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 51 KSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 51 k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
....+++|||+|||.++++++|+++|++||+|.++ .+..|+.+|++
T Consensus 2 ~~~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~-~~~~d~~~g~~ 47 (85)
T d1b7fa2 2 ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQK-NILRDKLTGRP 47 (85)
T ss_dssp STTTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEE-EEEECTTTCCE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeee-eeecccccccC
Confidence 34457889999999999999999999999999876 66689988875
No 35
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=4.2e-12 Score=79.80 Aligned_cols=49 Identities=4% Similarity=0.121 Sum_probs=45.0
Q ss_pred ceEEEEEeeCC--CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 2 VMYFVDIKKQS--SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 2 ~I~~v~ik~~~--~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
.|++|.|.++. +++|||||+|.+.++|.+|++.|||+++.|++|+|.|.
T Consensus 53 ~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 53 EVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp CEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred CEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 68899997764 89999999999999999999999999999999998874
No 36
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.25 E-value=2.7e-12 Score=76.53 Aligned_cols=41 Identities=10% Similarity=0.108 Sum_probs=37.2
Q ss_pred EEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCCC
Q psy11608 57 CVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKCG 98 (99)
Q Consensus 57 ~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~~ 98 (99)
+|||+|||+++++++|+++|++||+|.++ .+..|+.||++.
T Consensus 2 klfV~nLp~~~te~~l~~~F~~~G~i~~v-~i~~d~~tg~~k 42 (77)
T d1uawa_ 2 KMFIGGLSWQTTQEGLREYFGQFGEVKEC-LVMRDPLTKRSR 42 (77)
T ss_dssp CEEEESCCSSCCSHHHHHHHTTTSCCCCE-EEECCCCSSSCS
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCccee-eeecccCCCCcc
Confidence 69999999999999999999999999886 666999999864
No 37
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=3.5e-12 Score=77.02 Aligned_cols=44 Identities=9% Similarity=0.034 Sum_probs=38.8
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.+.++|||||||.++++++|+++|++||+|.++ .+..|+.+|+.
T Consensus 4 e~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v-~i~~d~~tg~~ 47 (84)
T d1l3ka1 4 EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDC-VVMRDPNTKRS 47 (84)
T ss_dssp GGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEE-EEEECTTTCCE
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhhccccce-eecccccCCCc
Confidence 345789999999999999999999999999876 56699998874
No 38
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.25 E-value=5.4e-12 Score=82.03 Aligned_cols=51 Identities=18% Similarity=0.306 Sum_probs=46.6
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
.|.+|.|.++. +++|||||+|.+.++|++|++.|||..++|++|+|.++++
T Consensus 68 ~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~ 121 (139)
T d1u6fa1 68 PIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAAS 121 (139)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESSC
T ss_pred cccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 58889888764 6899999999999999999999999999999999999864
No 39
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=3.3e-12 Score=77.17 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=37.7
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCCC
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKCG 98 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~~ 98 (99)
++|||||||.++++++|+++|++||+|.++ .+..|+.||++.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v-~i~~d~~tg~~r 43 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAF-NLVKDSATGLSK 43 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEE-EEECCCSSSCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceE-Eeeccccccccc
Confidence 589999999999999999999999999876 666899988764
No 40
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.23 E-value=4.8e-12 Score=76.19 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=43.7
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCC--eEEEEeec
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGH--NRVNLGYG 50 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~--~~i~v~~~ 50 (99)
+|.+|.|.++. +++|||||+|.++++|++|++.|||..+.+ ++|+|.||
T Consensus 32 ~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 32 SIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 85 (85)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEEC
Confidence 58899988874 789999999999999999999999998865 88999875
No 41
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=1.8e-12 Score=77.14 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=36.5
Q ss_pred EEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCCC
Q psy11608 57 CVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKCG 98 (99)
Q Consensus 57 ~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~~ 98 (99)
+|||||||+++++++|+++|++||+|.++ .+..|+.+|++.
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v-~i~~d~~t~~~r 41 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESI-ELPMDNKTNKRR 41 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEE-ECCCCTTTCCTT
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccc-cccccccccccc
Confidence 69999999999999999999999999875 666899888753
No 42
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=8.6e-12 Score=77.81 Aligned_cols=50 Identities=18% Similarity=0.236 Sum_probs=45.1
Q ss_pred ceEEEEEeeC---CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQ---SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~---~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
.|.+|.|.++ ++++|||||+|.+.++|++|++ |||..++|++|+|.++++
T Consensus 44 ~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 44 KVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp CEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHH
T ss_pred eEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCC
Confidence 5889999887 4899999999999999999995 999999999999988653
No 43
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=6.9e-12 Score=75.65 Aligned_cols=49 Identities=8% Similarity=0.259 Sum_probs=43.4
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCC--eEEEEeec
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGH--NRVNLGYG 50 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~--~~i~v~~~ 50 (99)
+|.+|.|.+|+ +++|||||+|.++++|++|++.|||..+.| ++|+|.|+
T Consensus 32 ~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 32 RIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 68899998764 789999999999999999999999999986 56888875
No 44
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=1.1e-11 Score=77.19 Aligned_cols=50 Identities=20% Similarity=0.151 Sum_probs=45.5
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
+|.+|.|.++ ++|||||+|.++++|++|++.|||..+.|++|+|.|++..
T Consensus 29 ~I~~v~i~~~--~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~ 78 (109)
T d2adca1 29 DVQRVKILFN--KKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQ 78 (109)
T ss_dssp CEEEEEECCT--TSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCC
T ss_pred ccceEEEEec--ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 6889999876 4899999999999999999999999999999999998643
No 45
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=2.5e-11 Score=73.02 Aligned_cols=49 Identities=20% Similarity=0.419 Sum_probs=42.4
Q ss_pred eEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 3 MYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 3 I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
|..+.++ +++|||||+|.++++|++|++.|||..++|++|+|.|++|..
T Consensus 35 i~~~~~~---~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~ 83 (86)
T d2cpda1 35 GAVERVK---KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVD 83 (86)
T ss_dssp TCEEEEE---ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCC
T ss_pred eeeEEEc---cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCC
Confidence 3445554 468999999999999999999999999999999999998653
No 46
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=3.7e-12 Score=75.35 Aligned_cols=41 Identities=10% Similarity=0.251 Sum_probs=36.4
Q ss_pred EEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCCC
Q psy11608 57 CVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKCG 98 (99)
Q Consensus 57 ~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~~ 98 (99)
+|||||||+++++++|+++|++||+|.++ .+..|+.+|++.
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~-~i~~d~~t~~~k 41 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDC-TLKLDPITGRSR 41 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEE-ECCCBTTTTBCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhcccccc-ccccCCCCCCcC
Confidence 69999999999999999999999999876 566899888763
No 47
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=4e-12 Score=79.08 Aligned_cols=52 Identities=15% Similarity=0.295 Sum_probs=46.4
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
.|++|.|.++. +++|||||+|.+.++|++|+++|||..+++++|+|.++.+.
T Consensus 34 ~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~~ 88 (104)
T d1p1ta_ 34 PVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASE 88 (104)
T ss_dssp CCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTCT
T ss_pred cccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 47788887764 68999999999999999999999999999999999997653
No 48
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.19 E-value=1.5e-11 Score=77.21 Aligned_cols=50 Identities=8% Similarity=-0.013 Sum_probs=44.4
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
+|.++.+. ++++||||+|.+.++|++|+++|||..+.+++|+|.|+++.+
T Consensus 36 ~i~~~~~~---k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~~~~ 85 (104)
T d1weya_ 36 KDTTFQYF---KSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLH 85 (104)
T ss_dssp SSCEEEEE---TTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCCCSS
T ss_pred cceEEEEe---cCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecccCC
Confidence 46677776 479999999999999999999999999999999999997653
No 49
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=3.2e-11 Score=75.10 Aligned_cols=50 Identities=14% Similarity=0.183 Sum_probs=44.8
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
+|.+|.|.++. +++|||||+|.+.++|++|++.+|+ .+.|++|+|.++..
T Consensus 36 ~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~~ 88 (103)
T d2cqda1 36 DIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAYL 88 (103)
T ss_dssp CEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEESTT
T ss_pred cccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcCC
Confidence 68899998874 7999999999999999999999987 68999999988754
No 50
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.18 E-value=6.7e-12 Score=74.81 Aligned_cols=42 Identities=14% Similarity=0.009 Sum_probs=37.1
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
+++|||+|||+++++++|+++|++||+|.++ .+..|+.+|++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~-~i~~~~~~g~~ 43 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTC-RIMRDYKTGYS 43 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEE-ECCEETTTTEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccee-eeeeecccCCc
Confidence 4689999999999999999999999999875 66688888764
No 51
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=3.5e-11 Score=75.29 Aligned_cols=52 Identities=15% Similarity=0.179 Sum_probs=46.2
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
.|.+|.|.+|. +++|||||+|.+.++|++|++ ++|..+.|++|.|.++++..
T Consensus 46 ~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ke 100 (103)
T d1x4ba1 46 KLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVARE 100 (103)
T ss_dssp CCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSSCC
T ss_pred cccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcccC
Confidence 57889998774 799999999999999999995 79999999999999987653
No 52
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=1.7e-11 Score=72.49 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=37.4
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.++|||||||+++|+++|+++|++||+|..+ .+..|+.+|++
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~-~~~~~~~~~~~ 43 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI-EIMTDRGSGKK 43 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEE-EEEECTTTCCE
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhcccccc-ccccCCCCccc
Confidence 3689999999999999999999999999875 66688888865
No 53
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.17 E-value=3.7e-11 Score=71.03 Aligned_cols=42 Identities=10% Similarity=0.084 Sum_probs=39.3
Q ss_pred CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 12 SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 12 ~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
++++|||||+|.+.++|++|++.|||..+.|++|+|.++++.
T Consensus 30 ~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 30 DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 478999999999999999999999999999999999998654
No 54
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.17 E-value=8.7e-12 Score=75.71 Aligned_cols=43 Identities=14% Similarity=0.167 Sum_probs=37.8
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
..++|||||||+++++++|+++|++||+|.++ .+..|+.+|.+
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v-~i~~d~~~~~~ 46 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDI-QIPLDYETEKH 46 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCE-ECCCCSSSCCC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEec-ccccccccccc
Confidence 35789999999999999999999999999876 55589988875
No 55
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.17 E-value=1.6e-11 Score=74.30 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=44.6
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
+|.+|.+.+ ++|||||+|.+.++|++|++.|||..+.|++|+|.|+.+.+
T Consensus 34 ~i~~i~~~~---~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 34 KAGEVFIHK---DKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp CCSEEEEET---TTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CceEeeeec---ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 577888875 48999999999999999999999999999999999987543
No 56
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=2.4e-11 Score=74.53 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=44.5
Q ss_pred ceEEEEEeeC----CCCCCeEEEEeCCHHHHHHHHHhhCCe--EeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQ----SSASAFAFVQYTDIASVVRAMRAMDGE--YVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~----~~s~gfaFV~F~~~~~a~~Ai~~m~G~--~i~~~~i~v~~~k~~ 53 (99)
.|.+|.|.++ ++++|||||+|.+.++|.+|++.|++. .+++++|+|.|+++.
T Consensus 28 ~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~A~p~ 85 (96)
T d2disa1 28 GVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPE 85 (96)
T ss_dssp TEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEESCSS
T ss_pred cceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEEcCCC
Confidence 3788888766 379999999999999999999999754 567999999999864
No 57
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.16 E-value=2.5e-11 Score=73.55 Aligned_cols=45 Identities=16% Similarity=0.159 Sum_probs=39.0
Q ss_pred CCCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 52 SLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 52 ~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
+.+...|||+|||+++++++|+++|++||+|.++ .+..|+.+|++
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v-~i~~d~~tg~~ 48 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNI-HLNLDRRTGFS 48 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEE-EEEECTTTSSE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccc-ccccccccccc
Confidence 3456789999999999999999999999999876 66699988875
No 58
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.16 E-value=9e-12 Score=74.18 Aligned_cols=48 Identities=13% Similarity=0.209 Sum_probs=42.4
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
+|.+|.|.+|+ +|+|||||+|.++++|++|++ +||..++|++|+|..|
T Consensus 26 ~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 26 EVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 57788887774 799999999999999999997 7999999999988764
No 59
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=3e-11 Score=74.28 Aligned_cols=43 Identities=16% Similarity=0.233 Sum_probs=39.9
Q ss_pred CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 12 SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 12 ~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
++++|||||+|.++++|++|++.|||..+.|++|+|.++++.+
T Consensus 55 ~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~i~V~~a~~~~ 97 (101)
T d2cpea1 55 GKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKP 97 (101)
T ss_dssp CSBCSEEEEEBSSHHHHHHHHHHHTTCEETTEECEEECSSCCC
T ss_pred ccccceeeEEecCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 3789999999999999999999999999999999999998653
No 60
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.15 E-value=2.1e-11 Score=74.93 Aligned_cols=47 Identities=13% Similarity=0.288 Sum_probs=42.7
Q ss_pred eeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCCc
Q psy11608 9 KKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLAT 55 (99)
Q Consensus 9 k~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~~ 55 (99)
+.+++++|||||+|.+.++|++|++.|||..++|++|+|.|+++..+
T Consensus 47 ~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~~ 93 (96)
T d1fjca_ 47 SQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGG 93 (96)
T ss_dssp EETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSCC
T ss_pred eecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCC
Confidence 45668999999999999999999999999999999999999887643
No 61
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=4.6e-11 Score=71.94 Aligned_cols=49 Identities=18% Similarity=0.212 Sum_probs=43.7
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGK 51 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k 51 (99)
.|.+|.|.+|. +++|||||+|.++++|++|++ ++|..+.|++|+|..|.
T Consensus 32 ~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 32 TLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred cccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 58899998774 799999999999999999997 58899999999998764
No 62
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.15 E-value=1.9e-11 Score=74.76 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=38.6
Q ss_pred eCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 10 KQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 10 ~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
+.++++|||||+|.+.++|++|++ |||..++|++|+|.++++
T Consensus 49 ~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak~ 90 (91)
T d1fjeb1 49 RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPKG 90 (91)
T ss_dssp EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCCC
T ss_pred CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecCC
Confidence 346899999999999999999995 999999999999999875
No 63
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=6.2e-11 Score=72.41 Aligned_cols=51 Identities=20% Similarity=0.347 Sum_probs=44.6
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
+|.+|.|.+|+ .|+|||||+|.++++|++|++. +..++|++|+|.++.+..
T Consensus 34 ~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a~~k~ 87 (90)
T d2cqga1 34 EVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLPNSKQ 87 (90)
T ss_dssp CEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECCCTTC
T ss_pred ccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeCCCCC
Confidence 68999999874 7899999999999999999985 458899999999987654
No 64
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=2.2e-11 Score=72.54 Aligned_cols=40 Identities=13% Similarity=0.059 Sum_probs=36.5
Q ss_pred EEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 57 CVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 57 ~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.|||||||+++++++|+++|++||+|.++ .+..|+.||++
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v-~i~~d~~tg~~ 41 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSI-RVCRDMITRRS 41 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEE-EEEECTTTCCE
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEE-EEEecccccCC
Confidence 59999999999999999999999999886 66699998875
No 65
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=2.4e-11 Score=71.70 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=42.5
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
+|.+|.|.+++ +++|||||+|.++++|++|++ +++..+.|++|+|..|
T Consensus 25 ~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 25 EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred cccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 68889988874 799999999999999999997 7999999999988653
No 66
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.15 E-value=6e-11 Score=72.38 Aligned_cols=53 Identities=11% Similarity=0.228 Sum_probs=45.2
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhC------CeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMD------GEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~------G~~i~~~~i~v~~~k~~~ 54 (99)
+|.++.+..+. +++|||||+|.+.++|++|++.|| |..+.|++|+|.++++.+
T Consensus 34 ~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~~a~~k~ 95 (98)
T d1x4ha1 34 DLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAVTRD 95 (98)
T ss_dssp CEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEEEECCCCCC
T ss_pred cceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEEEEECCCCC
Confidence 46777776664 689999999999999999999876 778999999999987653
No 67
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=2.8e-11 Score=74.61 Aligned_cols=44 Identities=14% Similarity=0.245 Sum_probs=40.9
Q ss_pred CCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 11 QSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 11 ~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
.++++|||||+|.++++|++|++.|||..++|++|+|.|+++..
T Consensus 56 ~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak~k~ 99 (102)
T d2cpxa1 56 TGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGKNKK 99 (102)
T ss_dssp CSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECCCCS
T ss_pred cccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCCCcc
Confidence 35899999999999999999999999999999999999998754
No 68
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=5.6e-11 Score=73.75 Aligned_cols=51 Identities=12% Similarity=0.173 Sum_probs=44.2
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
.|++|.+.+ +.++|||||+|.++++|.+|++.|||+++.|++|+|.|..+.
T Consensus 45 ~V~~v~~~~-~~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr~i~v~~~~g~ 95 (99)
T d2dita1 45 QIRKLLLFD-RHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGT 95 (99)
T ss_dssp CCSEEEEET-TCTTCEEEEECSCHHHHHHHHHHSTTCEETTEECEEEECCSC
T ss_pred cEEEEeccC-CCCccEEEEEECCHHHHHHHHHHhCCcEECCEEEEEEEeCCc
Confidence 466776654 377899999999999999999999999999999999987654
No 69
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=2.6e-11 Score=72.07 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=36.2
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
++|||+|||+++++++|+++|++||+|.++ .+..|..+|++
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v-~i~~~~~~~~~ 43 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESC-KLVRDKITGQS 43 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEE-EEEECTTTCCE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccc-cceeeccCCCc
Confidence 579999999999999999999999999876 55588888764
No 70
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=2.2e-11 Score=75.83 Aligned_cols=42 Identities=21% Similarity=0.282 Sum_probs=37.2
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.++|||||||.++++++|+++|++||+|.++ .+..|+.||++
T Consensus 10 ~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v-~i~~d~~tg~~ 51 (103)
T d2cqda1 10 FTKIFVGGLPYHTTDASLRKYFEGFGDIEEA-VVITDRQTGKS 51 (103)
T ss_dssp SSEEEEECCCSSCCHHHHHHHHHTTSCEEEE-EESCCSSSCCC
T ss_pred CcEEEEeCCCCcCcHHHHHHHHhhcccccce-ecccccccccc
Confidence 4679999999999999999999999999876 55589888875
No 71
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13 E-value=1.1e-11 Score=76.96 Aligned_cols=51 Identities=8% Similarity=0.139 Sum_probs=44.7
Q ss_pred ceEEEEEeeCC--CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQS--SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~--~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
+|.++.+..+. +++|||||+|.+.++|++|++.|||..+.++++++.+++|
T Consensus 44 ~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~P 96 (101)
T d1x5oa1 44 QVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 96 (101)
T ss_dssp CEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSSC
T ss_pred cccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCCC
Confidence 57788888775 7899999999999999999999999999999988776654
No 72
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=3.7e-11 Score=73.52 Aligned_cols=43 Identities=7% Similarity=0.002 Sum_probs=38.0
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
++.+|||||||.++++++|+++|++||+|.++ .+..|+.+|.+
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v-~i~~~~~~~~~ 48 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSGDIKKI-IMGLDKMKKTA 48 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGSCEEEE-EEEECTTTCCE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCccee-ccccccccccc
Confidence 56799999999999999999999999999886 55589888764
No 73
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=4.9e-11 Score=71.97 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=41.2
Q ss_pred eEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeC-CeEEEEeecCC
Q psy11608 3 MYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVG-HNRVNLGYGKS 52 (99)
Q Consensus 3 I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~-~~~i~v~~~k~ 52 (99)
|.++.+ ..++++|||||+|.+.++|.+|+.+|+|..++ |++|+|.|+|+
T Consensus 37 v~~~~~-~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~ 86 (88)
T d2adca2 37 VVKGFK-FFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKS 86 (88)
T ss_dssp CEEEEE-ECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSS
T ss_pred EEEEEE-eeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCC
Confidence 444443 44577999999999999999999999999884 79999999985
No 74
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=2.6e-11 Score=74.24 Aligned_cols=43 Identities=23% Similarity=0.225 Sum_probs=37.9
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
++.+|||||||.++++++|+++|++||+|.++ .+..|+.+|.+
T Consensus 8 ~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v-~~~~d~~tg~~ 50 (93)
T d1x5ua1 8 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNT-HMPKDRVTGQH 50 (93)
T ss_dssp TTTEEEEECCCTTCCHHHHHHHHHTTSCEEEE-ECCBCSSSCSB
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhCCcccc-ceeeccccccc
Confidence 45789999999999999999999999999875 56689888875
No 75
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.12 E-value=2.6e-11 Score=74.70 Aligned_cols=41 Identities=27% Similarity=0.430 Sum_probs=37.0
Q ss_pred EEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 45 VNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 45 i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
-+++|+++.|+++|||+|||+++++++|+++|++||+|..+
T Consensus 7 ~~~g~g~~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~ 47 (97)
T d1whya_ 7 GKIGYGKANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 47 (97)
T ss_dssp CCCCCCCCCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEE
T ss_pred CCCCCCCCCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceE
Confidence 35678888999999999999999999999999999999654
No 76
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=2.9e-11 Score=72.18 Aligned_cols=41 Identities=27% Similarity=0.476 Sum_probs=37.6
Q ss_pred CCCeEEEEeCCHHHHHHHHHhhCCe-EeCCeEEEEeecCCCC
Q psy11608 14 ASAFAFVQYTDIASVVRAMRAMDGE-YVGHNRVNLGYGKSLA 54 (99)
Q Consensus 14 s~gfaFV~F~~~~~a~~Ai~~m~G~-~i~~~~i~v~~~k~~~ 54 (99)
++|||||+|.++++|++|++.|||. .+.|++|+|.|+.+..
T Consensus 36 ~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~ 77 (80)
T d2cqha1 36 KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKK 77 (80)
T ss_dssp ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCC
T ss_pred ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcC
Confidence 5899999999999999999999996 6999999999988654
No 77
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.12 E-value=5e-11 Score=71.40 Aligned_cols=48 Identities=19% Similarity=0.238 Sum_probs=41.7
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEe-CCeEEEEeecC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYV-GHNRVNLGYGK 51 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i-~~~~i~v~~~k 51 (99)
+|.+|.+.+ .++|||||+|.+.++|++|++.|||..+ ++++|+|.|++
T Consensus 34 ~i~~v~~~~--~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 34 GFKEVRLVP--NRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp TEEEEEECT--TTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred cEEEeeeec--ccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 577787765 4679999999999999999999999988 46899999986
No 78
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=5.7e-11 Score=72.12 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=38.6
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.++++|||+|||+++++++|+++|++||+|.++ .+..|+.+|++
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v-~i~~d~~t~~~ 49 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRI-YLAKDKTTGQS 49 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEE-EEEECSSSCSE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccc-ccccccccccc
Confidence 356789999999999999999999999999876 56689888864
No 79
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=3.8e-11 Score=75.12 Aligned_cols=42 Identities=12% Similarity=0.122 Sum_probs=36.8
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.++|||||||.++++++|+++|++||+|..+ .+..|+.+++.
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~-~i~~d~~~~~~ 61 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDC-VVMRDPASKRS 61 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEE-EEECCTTTSSC
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccce-eecccccCCCc
Confidence 4789999999999999999999999999875 56688887754
No 80
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=2.3e-11 Score=72.63 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=36.4
Q ss_pred EEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 58 VWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 58 lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
|||+|||+++++++|+++|++||+|.++..+..|+.+|++
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~ 40 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNS 40 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeecccccc
Confidence 7999999999999999999999999877678789988864
No 81
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.10 E-value=4.2e-11 Score=74.63 Aligned_cols=48 Identities=15% Similarity=0.130 Sum_probs=42.9
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
+|.+|.|. +++|||||+|.+.++|++|++.|||..+.+++|+|.|+..
T Consensus 36 ~I~~v~l~---~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~ 83 (111)
T d1whxa_ 36 SLGRVLLP---EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPI 83 (111)
T ss_dssp CEEEEECC---SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEET
T ss_pred CccEEEee---ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCC
Confidence 57777774 5789999999999999999999999999999999998754
No 82
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08 E-value=2.3e-11 Score=70.85 Aligned_cols=45 Identities=11% Similarity=0.192 Sum_probs=40.2
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEE
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVN 46 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~ 46 (99)
+|.++.+.+++ .++|||||+|.++++|++|++.|||..+.|+.+|
T Consensus 24 ~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 24 KIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp CEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred cccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 67888887765 7999999999999999999999999999998764
No 83
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08 E-value=3.8e-11 Score=72.88 Aligned_cols=42 Identities=10% Similarity=0.015 Sum_probs=38.6
Q ss_pred CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 12 SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 12 ~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
+.++|||||+|.+.++|++|+++|||..+.|++|+|.++++.
T Consensus 37 ~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~ 78 (88)
T d1wg1a_ 37 DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTD 78 (88)
T ss_dssp EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCC
T ss_pred eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 357899999999999999999999999999999999998643
No 84
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08 E-value=1.3e-10 Score=68.53 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=41.8
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
+|..+.+..++ +++|||||+|.++++|++|++ |||..++|++|+|..|
T Consensus 28 ~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 28 KIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred cccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 57777887764 789999999999999999995 8999999999999865
No 85
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.08 E-value=2.7e-11 Score=70.75 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=34.5
Q ss_pred EEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 57 CVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 57 ~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
+|||||||+++|+++|+++|++||+|..+ .+..++.+|++
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~-~~~~~~~~~~~ 40 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDA-MLMFDKTTNRH 40 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEE-CCBCCTTCTTS
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCccee-eeeeecccccc
Confidence 69999999999999999999999999875 44477777764
No 86
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.07 E-value=8.2e-11 Score=70.59 Aligned_cols=39 Identities=18% Similarity=0.299 Sum_probs=36.5
Q ss_pred CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 12 SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 12 ~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
++++|||||+|.+.++|++|+++|||..+++++|+|..|
T Consensus 48 g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 48 GMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 488999999999999999999999999999999998764
No 87
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=5.7e-11 Score=73.80 Aligned_cols=44 Identities=9% Similarity=0.223 Sum_probs=38.7
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.+.++|||+|||+++++++|+++|++||+|.++ .+..|+.+|.+
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~-~~~~~~~~g~~ 59 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSA-KVFIDKQTNLS 59 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEE-EEEECSSSCSE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhcccccc-ceeeecccCCC
Confidence 356789999999999999999999999999886 56689988874
No 88
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=6.1e-11 Score=71.99 Aligned_cols=43 Identities=5% Similarity=-0.030 Sum_probs=36.7
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGK 96 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~ 96 (99)
.+.++|||||||+++++++|+++|++||+|..+ .+..|+.+++
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v-~i~~d~~~~~ 48 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSC-KMITEHTSND 48 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEE-EEECCCCSSC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceee-eeecccCccc
Confidence 345789999999999999999999999999776 5557877664
No 89
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.07 E-value=6.4e-11 Score=72.96 Aligned_cols=44 Identities=11% Similarity=0.124 Sum_probs=37.9
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
..+++|||+|||.++++++|+++|++||+|.++ .+..|+.+|+.
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v-~i~~d~~tg~~ 49 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSEL-HYPIDSLTKKP 49 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEE-ECCCCTTTCCC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceee-eeccccccccc
Confidence 456889999999999999999999999999775 55578888764
No 90
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.05 E-value=4.9e-11 Score=77.37 Aligned_cols=42 Identities=10% Similarity=0.048 Sum_probs=37.5
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.++|||||||.++++++|+++|++||+|.++ .++.|+.||++
T Consensus 42 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v-~i~~d~~t~~~ 83 (139)
T d1u6fa1 42 LRNLMVNYIPTTVDEVQLRQLFERYGPIESV-KIVCDRETRQS 83 (139)
T ss_dssp TSEEEEESCSTTCCHHHHHHHHHHHSCEEEE-EEEEETTTTEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhcccccc-ccccccccccc
Confidence 4789999999999999999999999999876 66699988864
No 91
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.05 E-value=6.7e-11 Score=69.03 Aligned_cols=47 Identities=11% Similarity=0.084 Sum_probs=40.1
Q ss_pred eEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 3 MYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 3 I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
|.++.+..+. .++|||||+|.+.++|++|++ |||..++|++|+|.+|
T Consensus 26 i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 26 VDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred cceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 4556665543 789999999999999999996 9999999999999865
No 92
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05 E-value=1.2e-10 Score=67.76 Aligned_cols=40 Identities=20% Similarity=0.388 Sum_probs=35.1
Q ss_pred EEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCCC
Q psy11608 58 VWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKCG 98 (99)
Q Consensus 58 lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~~ 98 (99)
|||+|||+++++++|+++|++||+|..+ .+..++.+|++.
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~-~~~~~~~~~~~~ 40 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVST-KAILDKTTNKCK 40 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEE-EEECCSSSCSCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhcccccc-cccccccccccc
Confidence 7999999999999999999999999875 565888877763
No 93
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.05 E-value=3.4e-10 Score=66.72 Aligned_cols=47 Identities=17% Similarity=0.289 Sum_probs=41.8
Q ss_pred ceEEEEEeeCC-CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEee
Q psy11608 2 VMYFVDIKKQS-SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGY 49 (99)
Q Consensus 2 ~I~~v~ik~~~-~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~ 49 (99)
+|.+|.|.+++ .+++||||+|.++++|++|+. |||+.++|++|.|..
T Consensus 26 ~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~ 73 (75)
T d2ghpa2 26 PIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSH 73 (75)
T ss_dssp CEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEE
T ss_pred ceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEE
Confidence 68889997775 677899999999999999984 899999999998874
No 94
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05 E-value=1.9e-10 Score=69.23 Aligned_cols=49 Identities=10% Similarity=0.200 Sum_probs=43.5
Q ss_pred ceEEEEEeeCC--CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecC
Q psy11608 2 VMYFVDIKKQS--SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGK 51 (99)
Q Consensus 2 ~I~~v~ik~~~--~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k 51 (99)
+|.+|.|.++. +++|||||+|.++++|++|++ ++|..+.+++++|.+.+
T Consensus 32 ~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 32 QVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp CEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred ccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 68899998775 788999999999999999995 79999999999998753
No 95
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=6.2e-11 Score=70.21 Aligned_cols=48 Identities=13% Similarity=0.291 Sum_probs=41.8
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
+|.+|.|.+++ +++|||||+|.+.++|++|++ +++..++|+.|+|..|
T Consensus 25 ~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 25 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp CEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 68899988874 799999999999999999997 4778899999888653
No 96
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.04 E-value=2.1e-10 Score=70.45 Aligned_cols=51 Identities=25% Similarity=0.428 Sum_probs=44.1
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCC--eEEEEeecCCCCc
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGH--NRVNLGYGKSLAT 55 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~--~~i~v~~~k~~~~ 55 (99)
.|++|.+.+ +++||||+|.+.++|++|++.|||..+.+ ++|+|.|+++.|+
T Consensus 43 ~i~~~~~~~---~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~~~ 95 (97)
T d1whya_ 43 SIRTIDHVK---GDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSGPS 95 (97)
T ss_dssp CEEEEEECS---SSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCCCC
T ss_pred ccceEeeec---cccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCCCC
Confidence 577887764 48999999999999999999999999975 5899999987653
No 97
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=7.6e-11 Score=73.12 Aligned_cols=42 Identities=14% Similarity=0.126 Sum_probs=37.2
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.++|||+|||.++++++|+++|++||+|.++ .+..|+.+|++
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v-~i~~~~~tg~~ 49 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSF-RLVYDRETGKP 49 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEE-EEEEETTTTEE
T ss_pred CCEEEEECCCCcCCHHHHHHhhhcccccccc-ccccccceecc
Confidence 3579999999999999999999999999886 56689988864
No 98
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=2.6e-10 Score=70.54 Aligned_cols=50 Identities=16% Similarity=0.476 Sum_probs=40.7
Q ss_pred eEEEEEeeCC----CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 3 MYFVDIKKQS----SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 3 I~~v~ik~~~----~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
|.++.+..+. +++|||||+|.+.++|++|+ +|||..+.+++|+|.++++.
T Consensus 41 ~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a~~~ 94 (104)
T d1wi8a_ 41 ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVADQA 94 (104)
T ss_dssp EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEECCCC
T ss_pred cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEECCCC
Confidence 4455554442 68899999999999998776 59999999999999998754
No 99
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=6e-11 Score=71.75 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=36.6
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
...+|||||||+++++++|+++|++||+|..+ .+..++.+|++
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~-~~~~~~~~~~~ 46 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEV-VVVKDRETQRS 46 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEE-EECCCSSSCSC
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccce-eeccccccccc
Confidence 35789999999999999999999999999765 44477777765
No 100
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02 E-value=1.3e-10 Score=72.36 Aligned_cols=43 Identities=12% Similarity=0.085 Sum_probs=37.9
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKCG 98 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~~ 98 (99)
.++|||||||.++++++|+++|+.||+|.++ .++.|+.+|++.
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v-~i~~d~~tg~~k 60 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDV-RIISDRNSRRSK 60 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEE-EECCSCCSSSCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEE-EeeecCCCcccc
Confidence 4679999999999999999999999999876 555899888763
No 101
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02 E-value=1.4e-10 Score=72.47 Aligned_cols=51 Identities=18% Similarity=0.244 Sum_probs=43.9
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEe--CCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYV--GHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i--~~~~i~v~~~k~~ 53 (99)
.|++|.|.++ +++|||||+|.++++|++|++.|||..+ ++++|++.|+++.
T Consensus 33 ~i~~~~i~~~-~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~~ 85 (108)
T d2adba1 33 TVLKIITFTK-NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLT 85 (108)
T ss_dssp CEEEEEEEEE-TTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSSC
T ss_pred cEEEEEEEee-CCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCCc
Confidence 5788888765 4689999999999999999999999988 4688999988754
No 102
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.02 E-value=1.1e-10 Score=71.45 Aligned_cols=45 Identities=11% Similarity=0.062 Sum_probs=36.3
Q ss_pred CCCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCC-CCCC
Q psy11608 52 SLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGV-AGKC 97 (99)
Q Consensus 52 ~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~-~g~~ 97 (99)
..++++|||+|||.++++++|+++|++||+|..+ .+..|+. +|++
T Consensus 5 ~~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v-~i~~~~~~~g~~ 50 (94)
T d2cpha1 5 KQTTSKILVRNIPFQANQREIRELFSTFGELKTV-RLPKKMTGTGAH 50 (94)
T ss_dssp SSCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEE-ECCCCCSSSCSS
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEE-EEEeccccCCCc
Confidence 3457889999999999999999999999999765 4445653 5654
No 103
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.01 E-value=2e-10 Score=69.44 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=29.9
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
.++++|||+|||.++++++|+++|++||+|.++
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v 35 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDV 35 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEE
Confidence 457899999999999999999999999999653
No 104
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99 E-value=8.1e-11 Score=73.01 Aligned_cols=49 Identities=22% Similarity=0.184 Sum_probs=41.4
Q ss_pred EEEEEeeCC--CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCC
Q psy11608 4 YFVDIKKQS--SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 4 ~~v~ik~~~--~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~ 53 (99)
.+|.+..+. +++|||||+|.+.++|++|++ |||..|+++.|+|.++...
T Consensus 42 ~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~~~ 92 (102)
T d1weza_ 42 MRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNSTA 92 (102)
T ss_dssp SEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEECCC
T ss_pred ceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcCCC
Confidence 355555554 789999999999999999986 8999999999999887654
No 105
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99 E-value=2.8e-10 Score=70.97 Aligned_cols=50 Identities=18% Similarity=0.341 Sum_probs=44.5
Q ss_pred ceEEEEEeeCC-----CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecC
Q psy11608 2 VMYFVDIKKQS-----SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGK 51 (99)
Q Consensus 2 ~I~~v~ik~~~-----~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k 51 (99)
.|++|.|-++. .+.||+||+|.++++|.+|++.|||+.++||+|++.|..
T Consensus 40 ~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 40 LVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCD 94 (104)
T ss_dssp CEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCCSSSSCCEEEEEC
T ss_pred ceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCEECCeEEEEEEcC
Confidence 58889887754 467999999999999999999999999999999998864
No 106
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99 E-value=2.3e-10 Score=71.74 Aligned_cols=40 Identities=13% Similarity=0.032 Sum_probs=32.9
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVA 94 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~ 94 (99)
.+++|||+|||.++++++|+++|++||+|.++ .+..|..+
T Consensus 6 ~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i-~~~~~~~~ 45 (114)
T d2f9da1 6 VNRILYIRNLPYKITAEEMYDIFGKYGPIRQI-RVGNTPET 45 (114)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHTTSCEEEE-EEECSTTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcCCeEee-cccccCCc
Confidence 46789999999999999999999999999775 33344443
No 107
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.97 E-value=2.5e-10 Score=69.01 Aligned_cols=41 Identities=12% Similarity=0.144 Sum_probs=34.8
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGK 96 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~ 96 (99)
.++|||+|||+++++++|+++|++||+|.++ .+..|+.+.+
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~-~i~~~~~~~k 48 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSC-KVVCDENGSK 48 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEE-EECCBTTBCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEE-EEEeecCCCc
Confidence 4679999999999999999999999999775 5557776543
No 108
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.97 E-value=4.8e-10 Score=68.32 Aligned_cols=40 Identities=10% Similarity=0.104 Sum_probs=34.5
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVA 94 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~ 94 (99)
..++|||+|||.++++++|+++|++||+|.++ .+..|+.+
T Consensus 10 ~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v-~~~~~~~~ 49 (93)
T d2cq3a1 10 TPKRLHVSNIPFRFRDPDLRQMFGQFGKILDV-EIIFNERG 49 (93)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHGGGTSCEEEE-EEECCTTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcceeeec-cccccccC
Confidence 45789999999999999999999999999876 55577654
No 109
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.97 E-value=2.9e-10 Score=67.97 Aligned_cols=37 Identities=5% Similarity=-0.043 Sum_probs=32.9
Q ss_pred EEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCC
Q psy11608 58 VWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAG 95 (99)
Q Consensus 58 lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g 95 (99)
|||+|||.++++++|+++|++||+|.++ .+..|+.++
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v-~i~~~~~~~ 37 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSC-TISKKKNKA 37 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEE-EEEEEECTT
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCcccc-ceecccccc
Confidence 8999999999999999999999999876 555777665
No 110
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.96 E-value=2.7e-10 Score=69.41 Aligned_cols=43 Identities=9% Similarity=0.038 Sum_probs=36.3
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
..++|||||||+++++++|+++|++||+|.++ .+..|+.++++
T Consensus 7 ~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~-~~~~~~~~~~~ 49 (98)
T d1x4ha1 7 EGKTVFIRNLSFDSEEEALGEVLQQFGDLKYV-RVVLHPDTEHS 49 (98)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEE-ECCBCSSSCCB
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHhccccceee-eeccccccccc
Confidence 45789999999999999999999999999765 44467777764
No 111
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.95 E-value=1.8e-10 Score=69.48 Aligned_cols=46 Identities=13% Similarity=0.270 Sum_probs=41.0
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGK 51 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k 51 (99)
+|.++.|.++ |||||+|.+.++|++|++.|||..+.++.+++.+.+
T Consensus 26 ~v~~~~i~~~----g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~ 71 (87)
T d3begb1 26 DVCYADVYRD----GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIR 71 (87)
T ss_dssp CEEEEEECTT----SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCE
T ss_pred cccccccccc----ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEe
Confidence 5788888764 999999999999999999999999999998887654
No 112
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.95 E-value=1.4e-10 Score=68.68 Aligned_cols=39 Identities=13% Similarity=0.182 Sum_probs=33.2
Q ss_pred EEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 57 CVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 57 ~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
+|||+|||+++++++|+++|++||+|.++ .+..|+ +|++
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~-~i~~~~-~g~~ 40 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKA-AVHYDR-SGRS 40 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEE-EESCSS-CCCS
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEE-EEEEee-cccc
Confidence 79999999999999999999999999765 554665 5653
No 113
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.95 E-value=2.7e-10 Score=69.15 Aligned_cols=43 Identities=14% Similarity=0.081 Sum_probs=36.1
Q ss_pred CceEEEEcCCCCCCChHHH---HhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEH---NRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L---~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
+.+.|||+|||+++++++| +++|++||+|..+ .+..|+.++..
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v-~i~~~~~~~~~ 52 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKV-VINNSTSYAGS 52 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEE-EEECCSSCCSS
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEE-EEeeccCcCCC
Confidence 3567999999999999999 7899999999876 55578777654
No 114
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=2.5e-10 Score=71.29 Aligned_cols=42 Identities=7% Similarity=0.041 Sum_probs=35.3
Q ss_pred CCCCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCC
Q psy11608 51 KSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGV 93 (99)
Q Consensus 51 k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~ 93 (99)
.+.+..+|||+|||.++|+++|+++|++||.|.++ .+..++.
T Consensus 3 ~~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~-~i~~~~~ 44 (108)
T d2adba1 3 GQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKI-ITFTKNN 44 (108)
T ss_dssp CCCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEE-EEEEETT
T ss_pred CCCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEE-EEEeeCC
Confidence 34567899999999999999999999999999876 4446653
No 115
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=98.92 E-value=1e-09 Score=65.44 Aligned_cols=35 Identities=0% Similarity=-0.067 Sum_probs=31.6
Q ss_pred CCCCceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 51 KSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 51 k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
+..|+++|||+|||+++++++|+++|++||+|.++
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v 38 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEV 38 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEe
Confidence 34678999999999999999999999999999664
No 116
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.91 E-value=8.8e-10 Score=66.24 Aligned_cols=41 Identities=10% Similarity=0.049 Sum_probs=34.2
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.++|||+|||.++++++|+++|++||+|..+ .+..|+ +|++
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v-~l~~~~-~~~~ 46 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNI-QMRRTL-HKAF 46 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEE-EEEECT-TCCE
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccc-eeeeec-cCCc
Confidence 4689999999999999999999999999875 454454 6654
No 117
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.90 E-value=7.6e-10 Score=66.54 Aligned_cols=33 Identities=3% Similarity=0.050 Sum_probs=30.4
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
.|++.|||+|||+++++++|+++|++||.|.++
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~ 40 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKG 40 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEE
Confidence 468899999999999999999999999999754
No 118
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.89 E-value=5.2e-10 Score=69.07 Aligned_cols=47 Identities=17% Similarity=0.323 Sum_probs=41.6
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
.|++|.|.+ +|||||+|.+.++|++||+.|||..+.+++|+|.+.+.
T Consensus 41 ~v~~~~i~~----~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~ 87 (98)
T d1wg4a_ 41 DVCYADVQK----DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 87 (98)
T ss_dssp CEEEEEEET----TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEE
T ss_pred ccccccccc----cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEec
Confidence 477888864 59999999999999999999999999999998887653
No 119
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=3.7e-09 Score=63.51 Aligned_cols=50 Identities=8% Similarity=0.098 Sum_probs=42.4
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhh--CCeEeCCeEEEEeecCCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAM--DGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m--~G~~i~~~~i~v~~~k~~~ 54 (99)
.|.+|.+.+ ++|||||+|.++++|++|++.| ++..+.|++|+|.|++...
T Consensus 34 ~i~~v~~~~---~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~~~ 85 (88)
T d2cq1a1 34 KVTNILMLK---GKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKE 85 (88)
T ss_dssp CEEEEEEET---TTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSCSS
T ss_pred ccccccccc---cceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCCCC
Confidence 477777774 4799999999999999999975 5679999999999997653
No 120
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.89 E-value=6.6e-10 Score=65.44 Aligned_cols=39 Identities=13% Similarity=-0.023 Sum_probs=33.5
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCC
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAG 95 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g 95 (99)
+.|||+|||+++++++|+++|++||+|..+ .+..|+.++
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v-~~~~~~~~~ 39 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHV-DVADSLKKN 39 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEE-EEEECTTSS
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEE-EEEeecccc
Confidence 479999999999999999999999999775 555777644
No 121
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=1.3e-09 Score=67.44 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=35.7
Q ss_pred CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 13 SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 13 ~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
+++|||||+|.++++|++|++ +|+..|+++.|+|.++..
T Consensus 55 ~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~~ 93 (104)
T d1wg5a_ 55 RSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKSSR 93 (104)
T ss_dssp CBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEECT
T ss_pred CcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEECCH
Confidence 799999999999999999996 899999999999987654
No 122
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=3.4e-10 Score=68.24 Aligned_cols=30 Identities=13% Similarity=-0.008 Sum_probs=28.0
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
++|||||||+++++++|+++|++||+|..+
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~ 30 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYA 30 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhcccccc
Confidence 579999999999999999999999999765
No 123
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=1.6e-09 Score=65.18 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=32.0
Q ss_pred CCCCceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 51 KSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 51 k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
...|++.|||+|||+++++++|+++|++||.|.++
T Consensus 4 ~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v 38 (88)
T d2cq1a1 4 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNI 38 (88)
T ss_dssp CSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhcccccccc
Confidence 35688999999999999999999999999999765
No 124
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.86 E-value=1.2e-09 Score=65.71 Aligned_cols=31 Identities=16% Similarity=0.224 Sum_probs=28.7
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
..+|||+|||+++++++|+++|++||+|.++
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i 38 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 38 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEe
Confidence 4579999999999999999999999999765
No 125
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.86 E-value=3e-10 Score=68.38 Aligned_cols=44 Identities=5% Similarity=-0.123 Sum_probs=31.3
Q ss_pred CceEEEEcCCCCCCC-hHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCG-TGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s-~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
..++|||+|||++++ +++|+++|++||+|.++..+.-++.+|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~ 47 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFN 47 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CC
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCcccc
Confidence 357899999999986 55699999999999776333224556664
No 126
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=9.7e-10 Score=66.29 Aligned_cols=48 Identities=17% Similarity=0.114 Sum_probs=39.8
Q ss_pred eEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCC
Q psy11608 3 MYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLA 54 (99)
Q Consensus 3 I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~ 54 (99)
|.+|. ....++|||||+|.+.++|++|+. ++..+.+++|+|.++++..
T Consensus 32 v~~v~--~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~ 79 (88)
T d1wf0a_ 32 VMDVF--IPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKH 79 (88)
T ss_dssp CCEEE--CCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCC
T ss_pred ceEEE--EeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCC
Confidence 44554 345789999999999999999995 8899999999999987643
No 127
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=2.5e-10 Score=70.19 Aligned_cols=48 Identities=4% Similarity=0.137 Sum_probs=38.8
Q ss_pred ecCCCCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 49 YGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 49 ~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
+....|+++|||+|||.++++++|+++|++||.|..+ .+..|+.+|++
T Consensus 12 ~~~~~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~-~~~~~~~~g~~ 59 (102)
T d2cpxa1 12 YNPGEPNKVLYLKNLSPRVTERDLVSLFARFQEKKGP-PIQFRMMTGRM 59 (102)
T ss_dssp CCCCSCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSS-CCEEEEECSSS
T ss_pred CCCCCCCCEEEEeCCCCCCCHHHHHHHHhhccceeeE-Eeecccccccc
Confidence 3334578899999999999999999999999999876 44467666654
No 128
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=1.8e-09 Score=66.65 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=33.3
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGK 96 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~ 96 (99)
..++|||+|||+++++++|+++|++||+|..+ .+..|. +|+
T Consensus 17 ~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~-~~~~~~-~~~ 57 (101)
T d1x5oa1 17 DPTNLYISNLPLSMDEQELENMLKPFGQVIST-RILRDS-SGT 57 (101)
T ss_dssp CTTEEEEESCCTTCCHHHHHHTTTTTSCEEEE-EEEECS-SSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhcccccce-eeeccc-ccc
Confidence 34789999999999999999999999999654 443554 554
No 129
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.85 E-value=5.3e-10 Score=66.22 Aligned_cols=40 Identities=3% Similarity=-0.063 Sum_probs=29.7
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCC
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGK 96 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~ 96 (99)
.+|||+|||+++++++|+++|++||+|... .++.+..+|+
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~-~~~~~~~~~~ 41 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALS-IRLPSLRFNT 41 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCE-EECC------
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEee-eeeccccccc
Confidence 479999999999999999999999999654 3445666665
No 130
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.85 E-value=2e-09 Score=66.75 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=31.3
Q ss_pred CCCCceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 51 KSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 51 k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
+..|++.|||+|||+++++++|+++|++||+|..+
T Consensus 11 ~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~ 45 (104)
T d1wexa_ 11 KVSVSPVVHVRGLCESVVEADLVEALEKFGTICYV 45 (104)
T ss_dssp CCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEE
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEE
Confidence 34578999999999999999999999999999643
No 131
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=1.4e-09 Score=66.40 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=29.6
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
.++.+|||+|||+++++++|+++|++||.|..+
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~ 44 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDI 44 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEE
Confidence 346789999999999999999999999999654
No 132
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.84 E-value=1.2e-09 Score=67.81 Aligned_cols=31 Identities=10% Similarity=0.065 Sum_probs=28.5
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceee
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLA 84 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~ 84 (99)
.+++|||+|||+++++++|+++|++||+|..
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~ 39 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGR 39 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccE
Confidence 4578999999999999999999999999954
No 133
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.83 E-value=9.7e-10 Score=67.49 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=32.3
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDG 92 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~ 92 (99)
++.+|||+|||+++++++|+++|++||+|.++ .+..|+
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v-~i~~~k 54 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEI-RVFPEK 54 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEE-EEETTT
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEE-EEEecc
Confidence 45689999999999999999999999999776 443554
No 134
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.82 E-value=2.3e-09 Score=66.09 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=35.2
Q ss_pred CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 12 SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 12 ~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
++++|||||+|.+.++|++|++ +||..+++++|+|.++
T Consensus 47 g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~ 84 (103)
T d2cpya1 47 GQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVV 84 (103)
T ss_dssp SSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEE
T ss_pred CCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEEC
Confidence 4899999999999999999996 9999999999999764
No 135
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.81 E-value=4.4e-09 Score=65.11 Aligned_cols=49 Identities=16% Similarity=0.250 Sum_probs=42.0
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhh--CCeEeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAM--DGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m--~G~~i~~~~i~v~~~k~~ 53 (99)
+|.+|.+.+ ++|||||+|.++++|++|++.| ++..+++++|+|.|++..
T Consensus 41 ~I~~~~~~~---~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~~ 91 (104)
T d1wexa_ 41 TICYVMMMP---FKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSK 91 (104)
T ss_dssp CEEEEEEET---TTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSSS
T ss_pred cceEEEEEe---cceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCCC
Confidence 577888864 5899999999999999999987 556789999999998754
No 136
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=1.2e-09 Score=64.81 Aligned_cols=31 Identities=6% Similarity=0.060 Sum_probs=28.4
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeeee
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLATT 86 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~ 86 (99)
++|||||||+++++++|+++|++||.|.+..
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~ 32 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQ 32 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeE
Confidence 5799999999999999999999999997643
No 137
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.78 E-value=1e-08 Score=62.05 Aligned_cols=49 Identities=14% Similarity=0.045 Sum_probs=42.2
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhh--CCeEeCCeEEEEeecCCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAM--DGEYVGHNRVNLGYGKSL 53 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m--~G~~i~~~~i~v~~~k~~ 53 (99)
.|.+|.+.+ +++||||+|.+.++|+.|++.+ ++..+.|++|+|.|++..
T Consensus 35 ~I~~i~i~~---~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~~~ 85 (89)
T d1x4da1 35 VISNHLILN---KINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 85 (89)
T ss_dssp CEEEEEECS---SSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEECCC
T ss_pred CeEEEEeec---cceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECCCc
Confidence 577888865 4789999999999999999965 788999999999998753
No 138
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.78 E-value=2.6e-09 Score=65.88 Aligned_cols=42 Identities=5% Similarity=-0.043 Sum_probs=32.4
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcC-CCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDG-VAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~-~~g~~ 97 (99)
|..+|||+|||.++++++|+++|++|| ++++..+ .+. .+|++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~-~~~~~~g~~ 56 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLP-REPSNPERL 56 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECC-BCSSCTTSB
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceee-eeeccCCCc
Confidence 568999999999999999999999999 4454333 443 45543
No 139
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=9.3e-09 Score=67.95 Aligned_cols=50 Identities=20% Similarity=0.244 Sum_probs=43.8
Q ss_pred ceEEEEEeeCC---CCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQS---SASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~---~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~ 52 (99)
.|.++.|..+. +++|||||+|.+.++|++|++ ++|..+.|++|+|.++.+
T Consensus 123 ~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A~~ 175 (183)
T d1u1qa_ 123 KIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKALS 175 (183)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEECCC
T ss_pred ceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEecCC
Confidence 47788887763 789999999999999999997 799999999999998754
No 140
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=98.75 E-value=3.2e-10 Score=69.14 Aligned_cols=43 Identities=12% Similarity=0.004 Sum_probs=34.8
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.+..+|||+|||+++++++|+++|++||.|..+ .+ ++..+|++
T Consensus 11 ~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~-~v-~~~~~g~~ 53 (91)
T d1fjeb1 11 TTPFNLFIGNLNPNKSVAELKVAISELFAKNDL-AV-VDVRTGTN 53 (91)
T ss_dssp SSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTC-CC-CEEEEETT
T ss_pred CCCcEEEEeCccCcchHHHHHHHHhcCCcEEEe-ee-eecCCCCc
Confidence 446789999999999999999999999999765 34 45456654
No 141
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.75 E-value=4.6e-09 Score=64.12 Aligned_cols=45 Identities=13% Similarity=0.216 Sum_probs=34.6
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeee-------eEEEEcCCCCCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT-------TCVWVDGVAGKC 97 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~-------~~v~~d~~~g~~ 97 (99)
.++++|||+|||.++++++|+++|++||+|... ..+..|+.+|+.
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~ 57 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKP 57 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSB
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccc
Confidence 346799999999999999999999999998421 233356666653
No 142
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.72 E-value=6.8e-09 Score=63.89 Aligned_cols=48 Identities=6% Similarity=0.070 Sum_probs=41.4
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHH--hhCCeEeCCeEEEEeecCC
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMR--AMDGEYVGHNRVNLGYGKS 52 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~--~m~G~~i~~~~i~v~~~k~ 52 (99)
.|.+|.+.+ ++|||||+|.+.++|.+|++ .+++..++|++|+|.|++.
T Consensus 45 ~V~~v~~~~---~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~~ 94 (99)
T d1x4fa1 45 KIKNYILMR---MKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEK 94 (99)
T ss_dssp CCSEEEEET---TTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEECS
T ss_pred ceeEEEEee---cCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcCC
Confidence 467777764 58999999999999999998 5788899999999999864
No 143
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.71 E-value=3.3e-09 Score=64.25 Aligned_cols=35 Identities=6% Similarity=-0.108 Sum_probs=30.6
Q ss_pred CCCCceEEEEcCCCCC-CChHHHHhhhcCCCceeee
Q psy11608 51 KSLATTCVWVDGVAGK-CGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 51 k~~~~~~lfVg~l~~~-~s~~~L~~~F~~fG~i~~~ 85 (99)
+..+++.|||+|||.. +|++||.++|++||+|.++
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i 39 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNH 39 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEE
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEE
Confidence 4456789999999986 7899999999999999654
No 144
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=5.6e-09 Score=63.10 Aligned_cols=33 Identities=12% Similarity=0.297 Sum_probs=28.4
Q ss_pred CCceEEEEcCCCCCCChHHHHh----hhcCCCceeee
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNR----VNLGYGKSLAT 85 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~----~F~~fG~i~~~ 85 (99)
.|+++|||||||++++++||++ +|++||+|+++
T Consensus 1 ~P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i 37 (91)
T d1nu4a_ 1 RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDI 37 (91)
T ss_dssp CCCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccce
Confidence 3678999999999999999864 68999999654
No 145
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=3.2e-09 Score=65.64 Aligned_cols=37 Identities=8% Similarity=0.041 Sum_probs=30.5
Q ss_pred ceEEEEcCCCC-CCChHHHHhhhcCCCceeeeeEEEEcC
Q psy11608 55 TTCVWVDGVAG-KCGTGEHNRVNLGYGKSLATTCVWVDG 92 (99)
Q Consensus 55 ~~~lfVg~l~~-~~s~~~L~~~F~~fG~i~~~~~v~~d~ 92 (99)
++.|||+|||+ .+++++|+++|++||+|..+ .+..|+
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v-~i~~~~ 39 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRV-KILFNK 39 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEE-EECCTT
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceE-EEEecc
Confidence 56899999965 59999999999999999765 443564
No 146
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.68 E-value=6.2e-10 Score=67.22 Aligned_cols=39 Identities=18% Similarity=0.393 Sum_probs=35.5
Q ss_pred CCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecC
Q psy11608 12 SSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGK 51 (99)
Q Consensus 12 ~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k 51 (99)
++++|||||+|.+.++|++|++ |||..+.|++|+|..++
T Consensus 45 ~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~r~k 83 (90)
T d1u2fa_ 45 NQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIRRPH 83 (90)
T ss_dssp ETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCBCTT
T ss_pred CCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEECCCC
Confidence 4899999999999999999985 99999999999997654
No 147
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.67 E-value=8e-09 Score=60.95 Aligned_cols=32 Identities=9% Similarity=0.048 Sum_probs=27.8
Q ss_pred CCCceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 52 SLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 52 ~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
+.++++|||+|+| +|+++|+++|++||+|.++
T Consensus 2 p~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v 33 (79)
T d2bz2a1 2 PRKGNTLYVYGED--MTPTLLRGAFSPFGNIIDL 33 (79)
T ss_dssp CCCCCEEEEECSS--CCHHHHHHHHSTTCCCSCE
T ss_pred CCCCCEEEEECCC--CCHHHHHHHHhccCcccee
Confidence 3457899999996 8999999999999999654
No 148
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.66 E-value=8.2e-09 Score=61.59 Aligned_cols=30 Identities=3% Similarity=-0.076 Sum_probs=27.7
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceee
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLA 84 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~ 84 (99)
.++|||+|||+++++++|+++|++||.|..
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~ 37 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAV 37 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCE
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeee
Confidence 578999999999999999999999999853
No 149
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.65 E-value=2.9e-08 Score=59.34 Aligned_cols=44 Identities=14% Similarity=0.252 Sum_probs=35.5
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeE-EEEee
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNR-VNLGY 49 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~-i~v~~ 49 (99)
+|+++.+ ++++|||||+|.++++|++|++ +||..++|+. |.|..
T Consensus 29 ~I~~~~~---~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~ 73 (81)
T d1wwha1 29 NILKHVM---SNTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKP 73 (81)
T ss_dssp CEEEEEE---CSSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEE
T ss_pred hhheEEe---cCCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEe
Confidence 4666654 4678999999999999999996 9999999874 44543
No 150
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.64 E-value=5.1e-09 Score=65.90 Aligned_cols=30 Identities=3% Similarity=-0.086 Sum_probs=27.4
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
-.+||||||+++|+++|+++|++||+|..+
T Consensus 12 ~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v 41 (113)
T d1owxa_ 12 LLKFSGDLDDQTCREDLHILFSNHGEIKWI 41 (113)
T ss_dssp EEEEEESCCSSCCHHHHHHHTCSSCCEEEE
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCChheE
Confidence 457999999999999999999999999654
No 151
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.63 E-value=2.1e-08 Score=59.69 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=34.6
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.+.|||+|||.+++++||+++|+.||.+.....+ .+..+|++
T Consensus 9 ~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~-~~~~~g~~ 50 (86)
T d2cqpa1 9 PTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCL-KYNEKGMP 50 (86)
T ss_dssp SEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEE-EECSSSCE
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcccceeEEEE-EeCCCCCc
Confidence 4679999999999999999999999999765455 55556653
No 152
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=98.63 E-value=9.3e-09 Score=62.65 Aligned_cols=32 Identities=9% Similarity=-0.118 Sum_probs=29.0
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceee
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLA 84 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~ 84 (99)
.++++|||+|||.++++++|+++|++||+|..
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~ 45 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRL 45 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhccccee
Confidence 35689999999999999999999999999853
No 153
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.62 E-value=2e-08 Score=61.64 Aligned_cols=42 Identities=7% Similarity=-0.004 Sum_probs=34.7
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
..+|||+|||.++++++|+++|+.||.|... .++++..+|++
T Consensus 8 ~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~-~~~~~~~~g~~ 49 (103)
T d2cpya1 8 KVCAHITNIPFSITKMDVLQFLEGIPVDENA-VHVLVDNNGQG 49 (103)
T ss_dssp CCEEEEESCCTTSCHHHHHHHTTTSCCCSTT-EEECCCTTSSC
T ss_pred ceEEEEeCCCCCCCHHHHhhhhcccceEEEE-EEEEeCCCCCc
Confidence 4679999999999999999999999999654 34356667765
No 154
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.62 E-value=1.4e-08 Score=61.18 Aligned_cols=28 Identities=11% Similarity=0.168 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCc
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGK 81 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~ 81 (99)
.+++|||+|||++++++||+++|++||.
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G~ 31 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYDL 31 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSCC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcCc
Confidence 4678999999999999999999999993
No 155
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.61 E-value=2.3e-08 Score=61.39 Aligned_cols=32 Identities=13% Similarity=-0.005 Sum_probs=29.0
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
+..+|||+|||.++++++|+++|++||+|..+
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~ 45 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYA 45 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhcccccc
Confidence 35689999999999999999999999999654
No 156
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.61 E-value=1.9e-08 Score=61.78 Aligned_cols=33 Identities=9% Similarity=0.074 Sum_probs=29.1
Q ss_pred CCceEEEEcCCCCC-CChHHHHhhhcCCCceeee
Q psy11608 53 LATTCVWVDGVAGK-CGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 53 ~~~~~lfVg~l~~~-~s~~~L~~~F~~fG~i~~~ 85 (99)
.+++.|||+|||.+ +++++|+++|++||+|.++
T Consensus 16 ~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v 49 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNY 49 (99)
T ss_dssp CCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEE
T ss_pred CCCCEEEEeCCcCCccCHHHHHhhhccccceeEE
Confidence 45678999999975 8999999999999999765
No 157
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.61 E-value=2.9e-08 Score=61.20 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=35.9
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
.+..|||+|||.+++++||+++|+.||.+... .++++..+|++
T Consensus 14 ~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~-v~~~~~~~~~~ 56 (104)
T d1wg5a_ 14 NDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG-MTLPVDFQGRS 56 (104)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHTTTCCEEEEE-EECCBCSSSCB
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCceEE-EEEEeCCCCCc
Confidence 35679999999999999999999999999764 45477777765
No 158
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.61 E-value=7e-09 Score=63.14 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=29.7
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCc-eeeeeEEEEcC
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGK-SLATTCVWVDG 92 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~-i~~~~~v~~d~ 92 (99)
-+|||||||.++++++|+++|++||+ |.++ .+..|.
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v-~~~~~~ 38 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDV-IVYASA 38 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEE-ECCSSS
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEE-EEeeec
Confidence 47999999999999999999999997 6443 444554
No 159
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.59 E-value=7.7e-09 Score=64.82 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=35.5
Q ss_pred eCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 10 KQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 10 ~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
.++.++|||||+|.+.++|++|++ |||..|+++.|.|..+
T Consensus 55 ~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~ 94 (112)
T d1wela1 55 PNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPI 94 (112)
T ss_dssp TTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEE
T ss_pred cccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEc
Confidence 345899999999999999999996 9999999999988654
No 160
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55 E-value=5.9e-08 Score=59.93 Aligned_cols=36 Identities=17% Similarity=0.333 Sum_probs=31.4
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEe
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYV 40 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i 40 (99)
+|++|.+.+ ++|||||+|.+.++|++|+++|||+.+
T Consensus 46 ~i~~i~~~~---~k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 46 LVDALLMPP---NKPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CEEEEECCT---TCSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred cccEEeecc---CccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 467777664 589999999999999999999999877
No 161
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.49 E-value=6.9e-08 Score=60.28 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=35.5
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
+..+|||+|||.++++++|+++|+.||.+.... +..+..+|++
T Consensus 17 ~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~-~~~~~~~g~~ 59 (112)
T d1wela1 17 AGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSI-YIAYGPNGKA 59 (112)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTC-EEEECTTSSE
T ss_pred CCeEEEEecCCCcCcHHHHhhHHhhccccccce-eeecCcccce
Confidence 456899999999999999999999999996643 4466667764
No 162
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.49 E-value=8.7e-08 Score=55.98 Aligned_cols=23 Identities=17% Similarity=0.374 Sum_probs=22.7
Q ss_pred EEEcCCCCCCChHHHHhhhcCCC
Q psy11608 58 VWVDGVAGKCGTGEHNRVNLGYG 80 (99)
Q Consensus 58 lfVg~l~~~~s~~~L~~~F~~fG 80 (99)
|||+|||+++++++|+++|++||
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g 23 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE 23 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC
T ss_pred CEEeCCCCcCCHHHHHHHHhccc
Confidence 79999999999999999999999
No 163
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=2.5e-08 Score=61.64 Aligned_cols=34 Identities=24% Similarity=0.112 Sum_probs=29.7
Q ss_pred CCCceEEEE--cCCCCCCChHHHHhhhcCCCceeee
Q psy11608 52 SLATTCVWV--DGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 52 ~~~~~~lfV--g~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
+.|++.||| ||||+++|+++|+++|++||.|.++
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i 50 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDAL 50 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEE
Confidence 457788999 5699999999999999999999654
No 164
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.46 E-value=1.3e-08 Score=61.14 Aligned_cols=30 Identities=3% Similarity=-0.193 Sum_probs=27.5
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
++|||||||.++++++|+++|++||.+...
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~ 31 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGL 31 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTS
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEE
Confidence 589999999999999999999999988643
No 165
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.46 E-value=5.1e-08 Score=59.77 Aligned_cols=31 Identities=13% Similarity=0.259 Sum_probs=27.0
Q ss_pred ceEEEEcCCCC-CCChHHHHhhhcCCCceeee
Q psy11608 55 TTCVWVDGVAG-KCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 55 ~~~lfVg~l~~-~~s~~~L~~~F~~fG~i~~~ 85 (99)
+.+|||+|||+ .+++++|+++|++||+|.++
T Consensus 15 ~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~ 46 (98)
T d1wf2a_ 15 NSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGC 46 (98)
T ss_dssp CCCEEEEEECTTTCCHHHHHHSSTTSSCEEEE
T ss_pred CcEEEEeCCCcccCCHHHHHHHHhhcCCEEEE
Confidence 56799999975 67889999999999999764
No 166
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.37 E-value=2.8e-07 Score=56.48 Aligned_cols=39 Identities=8% Similarity=0.063 Sum_probs=31.5
Q ss_pred CCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCC
Q psy11608 53 LATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGV 93 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~ 93 (99)
...+.|||+|||.++|++||+++|+.||.+ .+ .+..|..
T Consensus 13 ~~~~~v~v~nLp~~~te~dl~~~F~~~~~~-~v-~~~~~~~ 51 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATENDIYNFFSPLNPM-RV-HIEIGPD 51 (102)
T ss_dssp SSSCEEEEESCCTTCCHHHHHHSSCSCCCS-EE-EEEESSS
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHhccCcc-ee-eeEEecC
Confidence 345789999999999999999999999965 43 4446654
No 167
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.35 E-value=1e-07 Score=59.70 Aligned_cols=45 Identities=2% Similarity=0.174 Sum_probs=37.0
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCH-HHHHHHHHhhCCeEeCCeEEEEee
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDI-ASVVRAMRAMDGEYVGHNRVNLGY 49 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~-~~a~~Ai~~m~G~~i~~~~i~v~~ 49 (99)
+|.+|+|.+ ++|||||.|.++ ++|..|+..|||..+.++.+.+.+
T Consensus 37 ~V~~v~i~~---~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~ 82 (113)
T d1owxa_ 37 EIKWIDFVR---GAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTW 82 (113)
T ss_dssp CEEEEECCT---TCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEE
T ss_pred ChheEEEec---CCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEE
Confidence 688999975 589999999997 689999999999887766555544
No 168
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.04 E-value=9.9e-07 Score=54.50 Aligned_cols=33 Identities=6% Similarity=0.004 Sum_probs=27.5
Q ss_pred CCceEEEEcCCCCCC-Ch----HHHHhhhcCCCceeee
Q psy11608 53 LATTCVWVDGVAGKC-GT----GEHNRVNLGYGKSLAT 85 (99)
Q Consensus 53 ~~~~~lfVg~l~~~~-s~----~~L~~~F~~fG~i~~~ 85 (99)
..+++|||+||++++ ++ ++|+++|++||+|+++
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~ 40 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTF 40 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEE
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEE
Confidence 346899999999987 43 4699999999999775
No 169
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.95 E-value=2.7e-06 Score=50.41 Aligned_cols=31 Identities=23% Similarity=0.075 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
.+++|+|+|+|++.+++.| ++|++||+|.++
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~ 33 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKH 33 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEE
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheE
Confidence 3578999999999987766 589999999654
No 170
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.86 E-value=8.3e-06 Score=50.16 Aligned_cols=39 Identities=13% Similarity=0.068 Sum_probs=31.5
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCC
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGK 96 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~ 96 (99)
+.++|.+++.++++++|+++|++||+|.++ .+ .+..+|+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v-~I-~~~~~~~ 66 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEM-NV-CDNLGDH 66 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEE-EE-CCSSSSS
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEE-Ee-ecCCCCC
Confidence 468999999999999999999999999876 44 3334554
No 171
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.70 E-value=0.00047 Score=41.44 Aligned_cols=35 Identities=6% Similarity=-0.001 Sum_probs=27.5
Q ss_pred CCCCceEEEEcCC--CCCCC---------hHHHHhhhcCCCceeee
Q psy11608 51 KSLATTCVWVDGV--AGKCG---------TGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 51 k~~~~~~lfVg~l--~~~~s---------~~~L~~~F~~fG~i~~~ 85 (99)
+..+++.|+|.|+ |.++. .+||++.|++||+|..+
T Consensus 4 ~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v 49 (99)
T d2dita1 4 RMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKL 49 (99)
T ss_dssp CCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEE
T ss_pred CCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEE
Confidence 4567889999998 65432 36899999999999764
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.34 E-value=0.0019 Score=38.79 Aligned_cols=33 Identities=9% Similarity=0.002 Sum_probs=26.2
Q ss_pred CCceEEEEcCC--CCCCC--------hHHHHhhhcCCCceeee
Q psy11608 53 LATTCVWVDGV--AGKCG--------TGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 53 ~~~~~lfVg~l--~~~~s--------~~~L~~~F~~fG~i~~~ 85 (99)
.|++.|.+.|+ |..+. .+||++.|++||+|.++
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v 44 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI 44 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEE
Confidence 46888999998 55553 35799999999999764
No 173
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.24 E-value=0.019 Score=32.89 Aligned_cols=49 Identities=12% Similarity=0.236 Sum_probs=41.4
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeec
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYG 50 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~ 50 (99)
+|.+|.|--.....-.|=|.-.+.++|..|+..++.+.+|+|+|-|.++
T Consensus 22 ~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~ 70 (73)
T d2dgxa1 22 KVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLA 70 (73)
T ss_dssp CEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred eEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 4666666555555558999999999999999999999999999999875
No 174
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.38 E-value=0.046 Score=33.07 Aligned_cols=34 Identities=15% Similarity=0.251 Sum_probs=28.3
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcC
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDG 92 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~ 92 (99)
.++|.-..|+.+...||.++|++||.| ..-++|.
T Consensus 16 dHVf~~tFP~~Wk~~dI~~lFSpfG~V---~VswIdd 49 (100)
T d1whva_ 16 DHVLHVTFPKEWKTSDLYQLFSAFGNI---QISWIDD 49 (100)
T ss_dssp CSEEEEECCTTCCHHHHHHHHTTTCSC---CCEEEET
T ss_pred ceeEEEeCCcccchhHHHHHhcCCCce---EEEEecC
Confidence 357777799999999999999999999 4455664
No 175
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.27 E-value=0.067 Score=31.98 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=28.6
Q ss_pred CeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEee
Q psy11608 16 AFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGY 49 (99)
Q Consensus 16 gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~ 49 (99)
+---|+|.|-++|.+|++ ++|..+.++.+++.-
T Consensus 59 d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~ 91 (95)
T d1ufwa_ 59 GQMLVTFADSHSALSVLD-VDGMKVKGRAVKISG 91 (95)
T ss_dssp TEEEEECSCSHHHHHHHH-GGGSEETTEEEEEEC
T ss_pred CeEEEEECCcHHHHHHhc-cCCeEEcceEEEEec
Confidence 345799999999999997 899999999998763
No 176
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.38 E-value=0.12 Score=30.60 Aligned_cols=30 Identities=3% Similarity=-0.196 Sum_probs=27.0
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
++|-|..|||+++++++.+..+..|++.-.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~ 31 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYF 31 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEE
Confidence 588999999999999999999999988543
No 177
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]}
Probab=72.74 E-value=1.6 Score=25.71 Aligned_cols=61 Identities=10% Similarity=-0.005 Sum_probs=32.3
Q ss_pred HHHHhhCCeEeCCeEEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEE
Q psy11608 30 RAMRAMDGEYVGHNRVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWV 90 (99)
Q Consensus 30 ~Ai~~m~G~~i~~~~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~ 90 (99)
.|++++...-..+.+|.+........-.|.|.+=-+.++++.|.+.|++|-+-..+....+
T Consensus 108 NAi~~~~~~~~~~~~I~i~~~~~~~~~~i~v~D~G~gi~~e~l~~if~~~y~~~~~~~~~~ 168 (179)
T d1ixma_ 108 LFDQAVSRESENHLTVSLQTDHPDRQLILYLDFHGAFADPSAFDDIRQNGYEDVDIMRFEI 168 (179)
T ss_dssp HHHHHBCTTSCCEEEEEEECCCSSSSCEEEEEEESCBSCGGGCC-----------EEEEEE
T ss_pred HHHHHhhhccccchhhhhhhcccccEEEEEEEeCCCCcCHHHHHHHHHhccccccceEEEe
Confidence 4556555443344566666555555667999777788899999999999977655444433
No 178
>d1m1ha2 d.58.42.1 (A:5-50,A:132-186) N-utilization substance G protein NusG, N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=55.62 E-value=9 Score=22.12 Aligned_cols=60 Identities=10% Similarity=0.009 Sum_probs=40.1
Q ss_pred eEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcC
Q psy11608 3 MYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLG 78 (99)
Q Consensus 3 I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~ 78 (99)
|.+|.|....-=+||-||...-.+++-..++..+|..- -|--++-|.-++++++++++++
T Consensus 39 i~~v~VP~~klfPGYvfV~~~~~~~~~~~Ir~t~gV~~----------------fvg~~~~P~pl~~~Ev~~il~~ 98 (101)
T d1m1ha2 39 VDEVIVPANKIFPGYILIKAHMNDKLLMAIEKTPHVFR----------------PVMVGGKPVPLKEEEVQNILNQ 98 (101)
T ss_dssp EEEEECSSCSSSTTEEEEEECCCHHHHHHHHTSTTEEE----------------ECEETTEECEECHHHHHHHHHH
T ss_pred hHHHhccchhcCCCEEEEEEEeCchHHHHHhcCCCEEE----------------ecCCCCccCcCCHHHHHHHHHH
Confidence 34444443334679999999999999899998887621 0111344666788888877753
No 179
>d1g6pa_ b.40.4.5 (A:) Major cold shock protein {Thermotoga maritima [TaxId: 2336]}
Probab=54.31 E-value=4.3 Score=21.69 Aligned_cols=17 Identities=18% Similarity=0.382 Sum_probs=12.4
Q ss_pred EeeCCCCCCeEEEEeCC
Q psy11608 8 IKKQSSASAFAFVQYTD 24 (99)
Q Consensus 8 ik~~~~s~gfaFV~F~~ 24 (99)
||.=+..+|||||+-.+
T Consensus 5 Vk~f~~~kGfGFI~~~~ 21 (66)
T d1g6pa_ 5 VKWFDSKKGYGFITKDE 21 (66)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEeCCCCeeEEEecC
Confidence 44445789999998654
No 180
>d2i9xa1 d.366.1.1 (A:1-84) Putative septation protein SpoVG {Staphylococcus epidermidis [TaxId: 1282]}
Probab=54.08 E-value=5.5 Score=22.61 Aligned_cols=24 Identities=17% Similarity=0.207 Sum_probs=19.0
Q ss_pred CceEEEEEeeC---CCCCCeEEEEeCC
Q psy11608 1 MVMYFVDIKKQ---SSASAFAFVQYTD 24 (99)
Q Consensus 1 ~~I~~v~ik~~---~~s~gfaFV~F~~ 24 (99)
|.|++|.|++- ++=++||=|+|.+
T Consensus 1 M~ITdVrI~~i~~~gklkA~asvt~d~ 27 (84)
T d2i9xa1 1 MKVTDVRLRKIQTDGRMKALVSITLDE 27 (84)
T ss_dssp CCEEEEEEEECCSSSSEEEEEEEEETT
T ss_pred CeeEEEEEEEecCCCCEEEEEEEEECC
Confidence 88999999864 3667888888854
No 181
>d2ia9a1 d.366.1.1 (A:1-92) Putative septation protein SpoVG {Bacillus subtilis [TaxId: 1423]}
Probab=50.97 E-value=6.4 Score=22.67 Aligned_cols=24 Identities=17% Similarity=0.192 Sum_probs=19.0
Q ss_pred CceEEEEEeeCC---CCCCeEEEEeCC
Q psy11608 1 MVMYFVDIKKQS---SASAFAFVQYTD 24 (99)
Q Consensus 1 ~~I~~v~ik~~~---~s~gfaFV~F~~ 24 (99)
|.|++|.|++-. +=++||=|+|.+
T Consensus 1 M~ITdVrI~~i~~~g~lkA~asvt~d~ 27 (92)
T d2ia9a1 1 MEVTDVRLRRVNTDGRMRAIASITLDH 27 (92)
T ss_dssp CCEEEEEEEECCSSSSEEEEEEEEETT
T ss_pred CeeEEEEEEEecCCCCEEEEEEEEECC
Confidence 889999999763 567888888853
No 182
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=49.95 E-value=1.5 Score=20.84 Aligned_cols=12 Identities=8% Similarity=-0.047 Sum_probs=10.2
Q ss_pred ChHHHHhhhcCC
Q psy11608 68 GTGEHNRVNLGY 79 (99)
Q Consensus 68 s~~~L~~~F~~f 79 (99)
|+++|++.|.-|
T Consensus 1 seeel~eAF~~F 12 (33)
T d2hf5a1 1 SEEEIREAFRVF 12 (33)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 688999999877
No 183
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Probab=48.00 E-value=12 Score=23.35 Aligned_cols=40 Identities=5% Similarity=-0.070 Sum_probs=30.2
Q ss_pred EEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCCcee
Q psy11608 44 RVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSL 83 (99)
Q Consensus 44 ~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~ 83 (99)
+|++........-.|-|.+=-+.++++++.++|++|-+..
T Consensus 88 ~I~v~~~~~~~~~~i~V~D~G~GI~~~~~~~iF~~f~~~~ 127 (190)
T d1jm6a2 88 PIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTA 127 (190)
T ss_dssp CEEEEEEECSSEEEEEEEECSCCCCGGGTTGGGCTTCCCS
T ss_pred eEEEEEEeCCeEEEEEEeccCCCCCHHHHHHHhCcceecC
Confidence 4555554444556788888888999999999999997653
No 184
>d1h95a_ b.40.4.5 (A:) Y-box protein 1 cold shock domain (YB1-CSD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.12 E-value=5.6 Score=22.01 Aligned_cols=17 Identities=18% Similarity=0.407 Sum_probs=11.8
Q ss_pred EeeCCCCCCeEEEEeCC
Q psy11608 8 IKKQSSASAFAFVQYTD 24 (99)
Q Consensus 8 ik~~~~s~gfaFV~F~~ 24 (99)
||-=+..+|||||+=.+
T Consensus 13 VKwfn~~KGfGFI~~dd 29 (79)
T d1h95a_ 13 VKWFNVRNGYGFINRND 29 (79)
T ss_dssp EEEEETTTTEEEEEEGG
T ss_pred EEEEcCCCCeEEEEECC
Confidence 34435789999998543
No 185
>d1c9oa_ b.40.4.5 (A:) Major cold shock protein {Bacillus caldolyticus [TaxId: 1394]}
Probab=44.47 E-value=7.6 Score=20.58 Aligned_cols=17 Identities=12% Similarity=0.372 Sum_probs=12.1
Q ss_pred EeeCCCCCCeEEEEeCC
Q psy11608 8 IKKQSSASAFAFVQYTD 24 (99)
Q Consensus 8 ik~~~~s~gfaFV~F~~ 24 (99)
||-=+..+|||||+-.+
T Consensus 6 Vk~fn~~kGfGFI~~d~ 22 (66)
T d1c9oa_ 6 VKWFNNEKGYGFIEVEG 22 (66)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEECCCCEEEEEecC
Confidence 44445789999998654
No 186
>d1dyka1 b.29.1.4 (A:2744-2932) Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.48 E-value=4.6 Score=25.05 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=20.0
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCC-CceeeeeEEEEc
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGY-GKSLATTCVWVD 91 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~f-G~i~~~~~v~~d 91 (99)
+..|||||+|.+.....+...-..| |-| ..+.++
T Consensus 135 ~~~lyiGG~p~~~~~~~~~~~~~~F~GCi---~~v~in 169 (189)
T d1dyka1 135 VGILYVGGLPINYTTRRIGPVTYSLDGCV---RNLHME 169 (189)
T ss_dssp CSEEEESSCCTTCCCCSSCSCCSBCSEEE---EEEEES
T ss_pred ccceEEecccccccccccCcCCCCcEEEE---eEEEEC
Confidence 3579999999876654433322223 666 344454
No 187
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.77 E-value=21 Score=19.33 Aligned_cols=47 Identities=9% Similarity=0.096 Sum_probs=34.6
Q ss_pred HHHHHHHHhhCCeEeCCeEEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCC
Q psy11608 26 ASVVRAMRAMDGEYVGHNRVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYG 80 (99)
Q Consensus 26 ~~a~~Ai~~m~G~~i~~~~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG 80 (99)
...++|++.++|. ..+.+++. +.++.|---|..++.++|.+..+..|
T Consensus 25 ~~Ie~~l~~~~GV----~~v~vn~~----~~~v~v~~~~~~~~~~~i~~~I~~~G 71 (84)
T d1q8la_ 25 STIEGKIGKLQGV----QRIKVSLD----NQEATIVYQPHLISVEEMKKQIEAMG 71 (84)
T ss_dssp HHHHHHHHTCTTE----EEEEECST----TTEEEEEECTTTCCHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCc----eEEEEECC----CCEEceeecccccCHHHHHHHHHHhC
Confidence 4567888888875 34666654 45666765666789999999998888
No 188
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli [TaxId: 562]}
Probab=42.36 E-value=8.5 Score=20.58 Aligned_cols=17 Identities=24% Similarity=0.427 Sum_probs=12.0
Q ss_pred EeeCCCCCCeEEEEeCC
Q psy11608 8 IKKQSSASAFAFVQYTD 24 (99)
Q Consensus 8 ik~~~~s~gfaFV~F~~ 24 (99)
||-=+..+|||||.-.+
T Consensus 8 Vk~f~~~kGfGFI~~d~ 24 (69)
T d1mjca_ 8 VKWFNADKGFGFITPDD 24 (69)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEeCCCCEEEEEEcC
Confidence 34434789999998654
No 189
>d1f32a_ d.62.1.1 (A:) Pepsin inhibitor-3 {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Probab=41.09 E-value=4 Score=25.56 Aligned_cols=22 Identities=14% Similarity=0.232 Sum_probs=17.2
Q ss_pred CceEEEEcC-CCCCCChHHHHhh
Q psy11608 54 ATTCVWVDG-VAGKCGTGEHNRV 75 (99)
Q Consensus 54 ~~~~lfVg~-l~~~~s~~~L~~~ 75 (99)
.+++||||+ +.++.+.+++.++
T Consensus 81 qnNKvYVG~~~aRDLt~~E~~eL 103 (147)
T d1f32a_ 81 LGNKLFIDQKYVRDLTAKDHAEV 103 (147)
T ss_dssp ETTEEEETTEEEEECCHHHHHHH
T ss_pred EcCEEEEcceeeccCCHHHHHHH
Confidence 378999988 7888888777653
No 190
>d1m6ya1 a.60.13.1 (A:115-215) Putative methyltransferase TM0872, insert domain {Thermotoga maritima [TaxId: 2336]}
Probab=39.33 E-value=3.7 Score=23.91 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=15.2
Q ss_pred CCChHHHHhhhcCCCce
Q psy11608 66 KCGTGEHNRVNLGYGKS 82 (99)
Q Consensus 66 ~~s~~~L~~~F~~fG~i 82 (99)
+.++++|.++|..||+.
T Consensus 30 ~~~~~~L~~Il~~yGee 46 (101)
T d1m6ya1 30 ELPEEELARIIFEYGEE 46 (101)
T ss_dssp HSCHHHHHHHHHHTTCC
T ss_pred hhhHHHHHHHHHHhccc
Confidence 46899999999999976
No 191
>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.21 E-value=8.5 Score=20.83 Aligned_cols=18 Identities=17% Similarity=0.193 Sum_probs=14.0
Q ss_pred eEEEEEeeCCCCCCeEEE
Q psy11608 3 MYFVDIKKQSSASAFAFV 20 (99)
Q Consensus 3 I~~v~ik~~~~s~gfaFV 20 (99)
|+.|.|++++...+|||-
T Consensus 1 V~tv~l~r~~~~~~lGf~ 18 (79)
T d1y7na1 1 VTTVLIRRPDLRYQLGFS 18 (79)
T ss_dssp CEEEEEEESSTTSCCCEE
T ss_pred CEEEEEEcCCCCCCcCEE
Confidence 578899998877777774
No 192
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]}
Probab=37.86 E-value=14 Score=22.01 Aligned_cols=62 Identities=6% Similarity=-0.083 Sum_probs=38.2
Q ss_pred EeCCHHHHHHHHHhhCCe--EeCCeEEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCCce
Q psy11608 21 QYTDIASVVRAMRAMDGE--YVGHNRVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGKS 82 (99)
Q Consensus 21 ~F~~~~~a~~Ai~~m~G~--~i~~~~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i 82 (99)
-+.|+..-++++..|=.. .-....+.|........-.|-|.+=-+.++++++.++|++|-+.
T Consensus 38 ~~~d~~~l~~vl~NLl~NAik~~~~~i~i~~~~~~~~~~i~V~D~G~Gi~~~~~~~iF~~F~r~ 101 (146)
T d1id0a_ 38 FVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRV 101 (146)
T ss_dssp EESCHHHHHHHHHHHHHHHHHHCSSEEEEEEEECSSCEEEEEEESSSCCCGGGTTGGGSCCCCT
T ss_pred EEECHHHHHHHHHHHHHHHHHhhcCCEEEEEEeeCCEEEEEEEeeCCCCCHHHHHHHcCCcccC
Confidence 346777666655432111 11122344443333334568888888899999999999999765
No 193
>d1wg8a1 a.60.13.1 (A:109-206) Putative methyltransferase TM0872, insert domain {Thermus thermophilus [TaxId: 274]}
Probab=37.72 E-value=2.7 Score=24.52 Aligned_cols=18 Identities=11% Similarity=0.030 Sum_probs=15.7
Q ss_pred CCChHHHHhhhcCCCcee
Q psy11608 66 KCGTGEHNRVNLGYGKSL 83 (99)
Q Consensus 66 ~~s~~~L~~~F~~fG~i~ 83 (99)
..++++|.++|..||+.-
T Consensus 28 ~~~~~eL~~if~~yGee~ 45 (98)
T d1wg8a1 28 RLPLEALARLLRELGEEP 45 (98)
T ss_dssp HSCHHHHHHHHHHHHCCT
T ss_pred HhhHHHHHHHHHHHhhhH
Confidence 458999999999999873
No 194
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=36.93 E-value=17 Score=21.55 Aligned_cols=62 Identities=18% Similarity=0.045 Sum_probs=38.0
Q ss_pred EeCCHHHHHHHHHhhCCe---EeCCeEEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCCce
Q psy11608 21 QYTDIASVVRAMRAMDGE---YVGHNRVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGKS 82 (99)
Q Consensus 21 ~F~~~~~a~~Ai~~m~G~---~i~~~~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i 82 (99)
-..|+..-++++..+=.. +-+...|.+.-......-.|.|.+=-+.++++++.++|++|-+-
T Consensus 38 v~~d~~~l~~vl~NLl~NAiky~~~~~I~i~~~~~~~~~~i~V~D~G~Gi~~~~~~~ife~f~r~ 102 (148)
T d1ysra1 38 IVGLPAGLRLAVDNAIANAVKHGGATLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFERFSRG 102 (148)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEETTEEEEEEEESSSCCCGGGHHHHHTSCC--
T ss_pred EEECHHHHHHHHHHHHHHHHHhcCCcEEEEEEEecCCEEEEEEEEcCCCCCHHHHHHhcCccccC
Confidence 345676666666442111 00122455544333445679998888999999999999999654
No 195
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=35.89 E-value=18 Score=20.91 Aligned_cols=25 Identities=8% Similarity=0.217 Sum_probs=20.8
Q ss_pred CCCCeEEEEeCCHHHHHHHHHhhCC
Q psy11608 13 SASAFAFVQYTDIASVVRAMRAMDG 37 (99)
Q Consensus 13 ~s~gfaFV~F~~~~~a~~Ai~~m~G 37 (99)
.|-...|..|.+.++|+.|.+.+..
T Consensus 76 GSGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 76 GTGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp TTSSCEEEEESSHHHHHHHHHHSCG
T ss_pred CCCCEEEEEeCCHHHHHHHHHHcCc
Confidence 4555679999999999999998753
No 196
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=33.49 E-value=11 Score=20.23 Aligned_cols=17 Identities=18% Similarity=0.173 Sum_probs=14.6
Q ss_pred CCCCCCChHHHHhhhcC
Q psy11608 62 GVAGKCGTGEHNRVNLG 78 (99)
Q Consensus 62 ~l~~~~s~~~L~~~F~~ 78 (99)
||+++.|.++|++.|.+
T Consensus 10 gv~~~As~~eIk~aYr~ 26 (75)
T d1xbla_ 10 GVSKTAEEREIRKAYKR 26 (75)
T ss_dssp CCSSSCCHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHH
Confidence 68999999999998753
No 197
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]}
Probab=32.00 E-value=7.7 Score=23.67 Aligned_cols=61 Identities=11% Similarity=0.086 Sum_probs=36.9
Q ss_pred CCHHHHHHHHHhhCCe--EeCCeEEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCCcee
Q psy11608 23 TDIASVVRAMRAMDGE--YVGHNRVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSL 83 (99)
Q Consensus 23 ~~~~~a~~Ai~~m~G~--~i~~~~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~ 83 (99)
.|+..-++++..|=.. ...+..|.|........-.|.|.+=-+-+++++++++|++|.+..
T Consensus 43 ~d~~~l~~vl~NLi~NAik~~~~~i~i~~~~~~~~~~i~V~D~G~GI~~e~~~~iF~~F~r~~ 105 (161)
T d1bxda_ 43 MHPLSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGD 105 (161)
T ss_dssp ECHHHHHHHHHHHHHHHHTTCCSCEEEEEEEETTEEEEEEEEESSCSCTTGGGCSSCCCCCCS
T ss_pred ECHHHHHHHHHHHHHHHHHhCCCeEEEEEEEeCCEEEEEEEEcCCCCCHHHHHHHhCCceECC
Confidence 4566666555432100 111223454433223345688887778899999999999998764
No 198
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.94 E-value=12 Score=20.02 Aligned_cols=17 Identities=24% Similarity=0.222 Sum_probs=14.1
Q ss_pred CCCCCCChHHHHhhhcC
Q psy11608 62 GVAGKCGTGEHNRVNLG 78 (99)
Q Consensus 62 ~l~~~~s~~~L~~~F~~ 78 (99)
|||++.|.++|++.|.+
T Consensus 10 gv~~~as~~eIk~ay~~ 26 (77)
T d1hdja_ 10 GLARGASDEEIKRAYRR 26 (77)
T ss_dssp TCCTTCCHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHH
Confidence 58899999999988853
No 199
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.75 E-value=13 Score=25.37 Aligned_cols=26 Identities=23% Similarity=0.249 Sum_probs=21.3
Q ss_pred EEEEcCCCCCCChHHHHhhh---------cCCCce
Q psy11608 57 CVWVDGVAGKCGTGEHNRVN---------LGYGKS 82 (99)
Q Consensus 57 ~lfVg~l~~~~s~~~L~~~F---------~~fG~i 82 (99)
-+.|||||.+++..-|.+.+ .+||.+
T Consensus 129 ~~vvaNLPy~iss~il~~~l~~~~~~~~l~~~g~~ 163 (322)
T d1i4wa_ 129 FLTVANVTGEGSEGLIMQWLSCIGNKNWLYRFGKV 163 (322)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSEE
T ss_pred eEEEEeCCchhhHHHHHHHHHhccccccccccccc
Confidence 36889999999999887765 478877
No 200
>d2ix0a2 b.40.4.5 (A:4-82) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=30.93 E-value=4.6 Score=22.47 Aligned_cols=13 Identities=15% Similarity=0.432 Sum_probs=8.9
Q ss_pred CCCCeEEEEeCCH
Q psy11608 13 SASAFAFVQYTDI 25 (99)
Q Consensus 13 ~s~gfaFV~F~~~ 25 (99)
+++|||||.-.+.
T Consensus 26 ~~~G~GFv~~d~~ 38 (79)
T d2ix0a2 26 TEKGFGFLEVDAQ 38 (79)
T ss_dssp CC--CEEEEEETT
T ss_pred eCCCcEEEEECCC
Confidence 6899999997664
No 201
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.51 E-value=4.1 Score=21.06 Aligned_cols=12 Identities=8% Similarity=-0.047 Sum_probs=7.9
Q ss_pred ChHHHHhhhcCC
Q psy11608 68 GTGEHNRVNLGY 79 (99)
Q Consensus 68 s~~~L~~~F~~f 79 (99)
|+++|++.|..|
T Consensus 1 Seeel~~aF~~f 12 (65)
T d1fw4a_ 1 SEEEIREAFRVF 12 (65)
T ss_dssp CCHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 466777777665
No 202
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}
Probab=28.57 E-value=21 Score=21.41 Aligned_cols=62 Identities=10% Similarity=0.080 Sum_probs=38.7
Q ss_pred eCCHHHHHHHHHhhCCe---Ee--C--CeEEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCCcee
Q psy11608 22 YTDIASVVRAMRAMDGE---YV--G--HNRVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGKSL 83 (99)
Q Consensus 22 F~~~~~a~~Ai~~m~G~---~i--~--~~~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~ 83 (99)
+.|+..-++++..|=.. +- + ...|.+........-.|.|.+=-+.+++++++++|++|-+..
T Consensus 44 ~~D~~~l~qvl~NLi~NAik~t~~~~~~~~i~i~~~~~~~~~~i~V~D~G~GI~~~~~~~iF~~F~~~~ 112 (161)
T d2c2aa2 44 YIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD 112 (161)
T ss_dssp EECHHHHHHHHHHHHHHHHHTCCTTCTTCEEEEEEEEETTEEEEEEEECSSCCCGGGTTGGGSTTCCCC
T ss_pred EECHHHHHHHHHHHHHHHHHhhhcCCCcceeeEEEEecCCEEEEEEEEcCCCCCHHHHHHhhCCcEEcC
Confidence 45777766666432111 00 1 123444433333445688888888899999999999998773
No 203
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.33 E-value=20 Score=21.87 Aligned_cols=39 Identities=10% Similarity=0.003 Sum_probs=29.5
Q ss_pred EEEEeecCCCCceEEEEcCCCCCCChHHHHhhhcCCCce
Q psy11608 44 RVNLGYGKSLATTCVWVDGVAGKCGTGEHNRVNLGYGKS 82 (99)
Q Consensus 44 ~i~v~~~k~~~~~~lfVg~l~~~~s~~~L~~~F~~fG~i 82 (99)
+|.+........-.|.|.+=-+-++++++.++|++|-+.
T Consensus 82 ~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~~iF~~f~tt 120 (193)
T d1gkza2 82 DVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTT 120 (193)
T ss_dssp CEEEEEEECSSEEEEEEECCSCCCCTTTTTTTTSTTCCC
T ss_pred eEEEEEEccCCEEEEEEecCCCCCCHHHHHHhcCCceec
Confidence 455554444445678888888889999999999999765
No 204
>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.20 E-value=21 Score=19.03 Aligned_cols=28 Identities=14% Similarity=-0.038 Sum_probs=22.1
Q ss_pred ceEEEEcCCCCCCChHHHHhhhcCCCce
Q psy11608 55 TTCVWVDGVAGKCGTGEHNRVNLGYGKS 82 (99)
Q Consensus 55 ~~~lfVg~l~~~~s~~~L~~~F~~fG~i 82 (99)
.-++|+.|.-+..+.++|+++...+|--
T Consensus 6 g~~i~~~g~~~~~~~~~L~~li~~~GG~ 33 (102)
T d1t15a2 6 GLEICCYGPFTNMPTDQLEWMVQLCGAS 33 (102)
T ss_dssp TCEEEECSCCSSSCHHHHHHHHHHTTCE
T ss_pred CcEEEEeCCCCCcCHHHHHHHHHHhCCE
Confidence 3467887755668899999999999864
No 205
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=25.35 E-value=26 Score=22.94 Aligned_cols=29 Identities=3% Similarity=-0.301 Sum_probs=23.8
Q ss_pred EEEEcCCCCCCChHHHHhhhcCCCceeee
Q psy11608 57 CVWVDGVAGKCGTGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 57 ~lfVg~l~~~~s~~~L~~~F~~fG~i~~~ 85 (99)
-..|||||.++|.+-|.........+...
T Consensus 92 ~~vvgNlPY~Iss~Il~~l~~~~~~~~~~ 120 (252)
T d1qyra_ 92 LRVFGNLPYNISTPLMFHLFSYTDAIADM 120 (252)
T ss_dssp EEEEEECCTTTHHHHHHHHHTTGGGEEEE
T ss_pred eEEEecchHHHHHHHHHHhcccccceehh
Confidence 46779999999999999988777667554
No 206
>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.32 E-value=42 Score=18.70 Aligned_cols=72 Identities=17% Similarity=0.185 Sum_probs=41.0
Q ss_pred ceEEEEEeeCCCCCCeEEEEeCCHHHHHHHHHhhCCeEeCCeEEEEee-------cCC-CCceEEEEcCCCC-CCChHHH
Q psy11608 2 VMYFVDIKKQSSASAFAFVQYTDIASVVRAMRAMDGEYVGHNRVNLGY-------GKS-LATTCVWVDGVAG-KCGTGEH 72 (99)
Q Consensus 2 ~I~~v~ik~~~~s~gfaFV~F~~~~~a~~Ai~~m~G~~i~~~~i~v~~-------~k~-~~~~~lfVg~l~~-~~s~~~L 72 (99)
.|..|.|+|++.+.||.++...+...- -.|.++ . +|.- +.- .-+.-|.|.|.+- .++-++.
T Consensus 8 ~~~~V~l~k~~~glG~~i~~~~~~~~~------~~~i~V--~--~v~~gg~A~~~G~L~~GD~Il~INg~~v~~~~~~ev 77 (110)
T d1um1a_ 8 YVFTVELERGPSGLGMGLIDGMHTHLG------APGLYI--Q--TLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRA 77 (110)
T ss_dssp CEEEEEEECCTTCCCEEEEETTTSTTC------CSSEEE--E--EECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHH
T ss_pred CEEEEEEEECCCCCCEEEEeecCCCCC------CCCEEE--E--EECCCCHHHHcCCCccCCEEEEECCEECCCCCHHHH
Confidence 478999999988888888764332100 001111 0 1110 011 1245577766543 4678888
Q ss_pred HhhhcCCCcee
Q psy11608 73 NRVNLGYGKSL 83 (99)
Q Consensus 73 ~~~F~~fG~i~ 83 (99)
.+++..-+..+
T Consensus 78 ~~llk~~~~~v 88 (110)
T d1um1a_ 78 VDLIRHGGKKM 88 (110)
T ss_dssp HHHHHTCCSEE
T ss_pred HHHHHcCCCeE
Confidence 88888777664
No 207
>d1egxa_ b.55.1.4 (A:) Vasodilator-stimulated phosphoprotein (VASP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.97 E-value=22 Score=20.48 Aligned_cols=14 Identities=0% Similarity=0.271 Sum_probs=10.8
Q ss_pred CeEEEEeCCHHHHHH
Q psy11608 16 AFAFVQYTDIASVVR 30 (99)
Q Consensus 16 gfaFV~F~~~~~a~~ 30 (99)
-|| +.|.++++|..
T Consensus 88 ~f~-lrF~~~e~A~~ 101 (115)
T d1egxa_ 88 VWG-LNFGSKEDAAQ 101 (115)
T ss_dssp EEE-EEESSHHHHHH
T ss_pred EEE-EEeCCHHHHHH
Confidence 355 58999999973
No 208
>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.46 E-value=19 Score=19.71 Aligned_cols=29 Identities=14% Similarity=0.006 Sum_probs=17.7
Q ss_pred eEEEEcCC-CCCCChHHHHhhhcCCCceee
Q psy11608 56 TCVWVDGV-AGKCGTGEHNRVNLGYGKSLA 84 (99)
Q Consensus 56 ~~lfVg~l-~~~~s~~~L~~~F~~fG~i~~ 84 (99)
.-|.|.|- -.+++.++..+++..-|.-+.
T Consensus 55 ~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~ 84 (91)
T d1m5za_ 55 RLLQVNHVRTRDFDCCLVVPLIAESGNKLD 84 (91)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTSTTEEE
T ss_pred EEEEECCEECCCCCHHHHHHHHHCCCCEEE
Confidence 34555432 245678888888887666543
No 209
>d1nrza_ c.38.1.1 (A:) Sorbose permease subunit IIb , EIIb-sor {Klebsiella pneumoniae [TaxId: 573]}
Probab=23.40 E-value=76 Score=19.26 Aligned_cols=21 Identities=19% Similarity=0.316 Sum_probs=17.2
Q ss_pred CCCeEEEEeCCHHHHHHHHHh
Q psy11608 14 ASAFAFVQYTDIASVVRAMRA 34 (99)
Q Consensus 14 s~gfaFV~F~~~~~a~~Ai~~ 34 (99)
+..--||-|.++++|.+.++.
T Consensus 75 ~~~~v~il~~~~~d~~~l~~~ 95 (163)
T d1nrza_ 75 QDETVFYLFTNPHDVLTMVRQ 95 (163)
T ss_dssp TTCEEEEEESSHHHHHHHHTT
T ss_pred cCceEEEEECCHHHHHHHHHc
Confidence 344679999999999998865
No 210
>d1blea_ c.38.1.1 (A:) Fructose permease, subunit IIb {Bacillus subtilis [TaxId: 1423]}
Probab=22.24 E-value=48 Score=20.22 Aligned_cols=20 Identities=15% Similarity=0.320 Sum_probs=16.5
Q ss_pred CCeEEEEeCCHHHHHHHHHh
Q psy11608 15 SAFAFVQYTDIASVVRAMRA 34 (99)
Q Consensus 15 ~gfaFV~F~~~~~a~~Ai~~ 34 (99)
..--||-|.++++|.+.++.
T Consensus 76 ~~~v~vl~~~~~da~~l~~~ 95 (161)
T d1blea_ 76 GVTAMLLFENPSDIVSLIEA 95 (161)
T ss_dssp TCEEEEEESSSHHHHHHHTT
T ss_pred CceEEEEeCCHHHHHHHHHc
Confidence 34569999999999998865
No 211
>d1dyka2 b.29.1.4 (A:2933-3117) Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.89 E-value=13 Score=22.62 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=16.7
Q ss_pred eEEEEcCCCCCCChHHHHhhhcCC-Cce
Q psy11608 56 TCVWVDGVAGKCGTGEHNRVNLGY-GKS 82 (99)
Q Consensus 56 ~~lfVg~l~~~~s~~~L~~~F~~f-G~i 82 (99)
..|||||+|.......+.. ...| |.|
T Consensus 126 ~~lyiGG~p~~~~~~~~~~-~~~F~GCi 152 (185)
T d1dyka2 126 DPVFVGGFPGGLNQFGLTT-NIRFRGCI 152 (185)
T ss_dssp BCCEESCCCTTCCCTTCSC-CCCCEEEE
T ss_pred CCEEEeCccccccccCccC-CCCcEEEe
Confidence 4599999998876544322 2344 767
No 212
>d1igqa_ b.34.1.3 (A:) Transcriptional repressor protein KorB {Escherichia coli [TaxId: 562]}
Probab=21.59 E-value=36 Score=17.47 Aligned_cols=15 Identities=27% Similarity=0.775 Sum_probs=12.4
Q ss_pred eCCCCCCeEEEEeCC
Q psy11608 10 KQSSASAFAFVQYTD 24 (99)
Q Consensus 10 ~~~~s~gfaFV~F~~ 24 (99)
|.|.+.|+|.+.|+|
T Consensus 20 rRP~~~G~awlkyED 34 (54)
T d1igqa_ 20 RRPPAEGYAWLKYED 34 (54)
T ss_dssp BCCSSTTEEEEEETT
T ss_pred CCCcccceEEEEEec
Confidence 345788999999998
No 213
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]}
Probab=21.50 E-value=29 Score=20.00 Aligned_cols=18 Identities=0% Similarity=0.023 Sum_probs=14.8
Q ss_pred EEEEcCCCCCCChHHHHh
Q psy11608 57 CVWVDGVAGKCGTGEHNR 74 (99)
Q Consensus 57 ~lfVg~l~~~~s~~~L~~ 74 (99)
.||||+.+...+.+.|++
T Consensus 10 ~lylG~~~~a~~~~~l~~ 27 (144)
T d1mkpa_ 10 FLYLGCAKDSTNLDVLEE 27 (144)
T ss_dssp TEEEECTTSCCCHHHHHH
T ss_pred CEEECChhHhcCHHHHHh
Confidence 499999988888777775
No 214
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=21.28 E-value=46 Score=18.66 Aligned_cols=26 Identities=15% Similarity=0.018 Sum_probs=21.5
Q ss_pred CCCCeEEEEeCCHHHHHHHHHhhCCe
Q psy11608 13 SASAFAFVQYTDIASVVRAMRAMDGE 38 (99)
Q Consensus 13 ~s~gfaFV~F~~~~~a~~Ai~~m~G~ 38 (99)
.|-...|.-|.+.++|++|.+.|...
T Consensus 84 GSGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 84 GSGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp TTSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 34456899999999999999998754
No 215
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.08 E-value=25 Score=19.55 Aligned_cols=20 Identities=5% Similarity=0.036 Sum_probs=16.1
Q ss_pred EcCCCCCCChHHHHhhhcCC
Q psy11608 60 VDGVAGKCGTGEHNRVNLGY 79 (99)
Q Consensus 60 Vg~l~~~~s~~~L~~~F~~f 79 (99)
|=||+++++.++|++.|.+.
T Consensus 21 iLgv~~~as~~eIk~aY~~l 40 (94)
T d1wjza_ 21 ILGADPSANMSDLKQKYQKL 40 (94)
T ss_dssp HTTCCTTCCHHHHHHHHHHT
T ss_pred HcCCCCCcCHHHHHHHHHHH
Confidence 34689999999999988643
No 216
>d1vpta_ c.66.1.25 (A:) Polymerase regulatory subunit VP39 {Vaccinia virus [TaxId: 10245]}
Probab=20.77 E-value=37 Score=23.32 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=31.1
Q ss_pred CceEEEEcCCCCCCChHHHHhhhcCCCceeeeeEEEEcCCCCCC
Q psy11608 54 ATTCVWVDGVAGKCGTGEHNRVNLGYGKSLATTCVWVDGVAGKC 97 (99)
Q Consensus 54 ~~~~lfVg~l~~~~s~~~L~~~F~~fG~i~~~~~v~~d~~~g~~ 97 (99)
+.+-||||. .+...-.-|.++|.++|..+ .-+++|+. +.|
T Consensus 61 ~~~VVYiGS-ApG~Hi~~L~~lf~~~~~~i--kw~LiDp~-~~d 100 (297)
T d1vpta_ 61 GATVVYIGS-APGTHIRYLRDHFYNLGVII--KWMLIDGR-HHD 100 (297)
T ss_dssp TCEEEEESC-SSCHHHHHHHHHHHHTTCCC--EEEEEESS-CCC
T ss_pred CcEEEEecc-CCCchHHHHHHHHHhhCCce--EEEEECCC-ccC
Confidence 457799984 56668999999999998663 67889986 445
No 217
>d2f1fa2 d.58.18.6 (A:78-163) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=20.36 E-value=32 Score=18.88 Aligned_cols=17 Identities=6% Similarity=-0.158 Sum_probs=12.0
Q ss_pred hHHHHhhhcCCCceeee
Q psy11608 69 TGEHNRVNLGYGKSLAT 85 (99)
Q Consensus 69 ~~~L~~~F~~fG~i~~~ 85 (99)
-+.+-+.+++||.|.++
T Consensus 54 id~fi~~l~~~g~I~Ei 70 (86)
T d2f1fa2 54 LDAFLASIRDVAKIVEV 70 (86)
T ss_dssp HHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHhhccCCEEEE
Confidence 35566788999987544
Done!