BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy11611
         (60 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P83094|STIM_DROME Stromal interaction molecule homolog OS=Drosophila melanogaster
           GN=Stim PE=1 SV=1
          Length = 570

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 36/41 (87%)

Query: 3   FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSEC 43
           FLREELKYD G EKRQKAFH NDDMH+SVKELW+ W++SE 
Sbjct: 170 FLREELKYDSGYEKRQKAFHFNDDMHISVKELWEAWLRSEV 210


>sp|Q13586|STIM1_HUMAN Stromal interaction molecule 1 OS=Homo sapiens GN=STIM1 PE=1 SV=3
          Length = 685

 Score = 34.3 bits (77), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 3   FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSEC 43
           FLRE+L Y D   K    FH  D + +SV++LW  W  SE 
Sbjct: 91  FLREDLNYHDPTVK-HSTFHGEDKL-ISVEDLWKAWKSSEV 129


>sp|P70302|STIM1_MOUSE Stromal interaction molecule 1 OS=Mus musculus GN=Stim1 PE=1 SV=2
          Length = 685

 Score = 34.3 bits (77), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 3   FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSEC 43
           FLRE+L Y D   K    FH  D + +SV++LW  W  SE 
Sbjct: 91  FLREDLNYHDPTVK-HSTFHGEDKL-ISVEDLWKAWKSSEV 129


>sp|Q58CP9|STIM1_BOVIN Stromal interaction molecule 1 OS=Bos taurus GN=STIM1 PE=2 SV=1
          Length = 683

 Score = 34.3 bits (77), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 3   FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSEC 43
           FLRE+L Y D   K    FH  D + +SV++LW  W  SE 
Sbjct: 89  FLREDLNYHDPTVK-HSTFHGEDKL-ISVEDLWKAWKSSEV 127


>sp|P84903|STIM1_RAT Stromal interaction molecule 1 OS=Rattus norvegicus GN=Stim1 PE=1
           SV=1
          Length = 685

 Score = 33.9 bits (76), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 3   FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSEC 43
           FLRE+L Y D   K    FH  D + +SV++LW  W  SE 
Sbjct: 91  FLREDLNYHDPTVK-HSTFHGEDKL-ISVEDLWKAWKASEV 129


>sp|P83093|STIM2_MOUSE Stromal interaction molecule 2 OS=Mus musculus GN=Stim2 PE=1 SV=2
          Length = 746

 Score = 33.9 bits (76), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 3   FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSEC 43
           F+RE++KY D   K     H+ +D H++V++LW  W  SE 
Sbjct: 95  FIREDMKYKDATNKHSH-LHR-EDKHITVEDLWKQWKTSEV 133


>sp|Q9P246|STIM2_HUMAN Stromal interaction molecule 2 OS=Homo sapiens GN=STIM2 PE=1 SV=2
          Length = 746

 Score = 33.1 bits (74), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 3   FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSEC 43
           F+RE++KY D   K     H+ +D H+++++LW  W  SE 
Sbjct: 95  FIREDMKYKDATNKHSH-LHR-EDKHITIEDLWKRWKTSEV 133


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.133    0.421 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,690,193
Number of Sequences: 539616
Number of extensions: 779508
Number of successful extensions: 1255
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1252
Number of HSP's gapped (non-prelim): 7
length of query: 60
length of database: 191,569,459
effective HSP length: 33
effective length of query: 27
effective length of database: 173,762,131
effective search space: 4691577537
effective search space used: 4691577537
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)