Query psy11611
Match_columns 60
No_of_seqs 39 out of 41
Neff 3.1
Searched_HMMs 13730
Date Fri Aug 16 23:04:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11611.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11611hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kw4a_ a.60.1.2 (A:) Polyhome 56.0 0.56 4.1E-05 24.5 -1.3 13 40-52 2-14 (70)
2 d1x53a1 d.129.3.5 (A:8-139) Ac 24.5 10 0.00074 21.2 0.6 21 28-48 13-34 (132)
3 d1wwva1 a.60.1.2 (A:8-85) Conn 20.8 10 0.00075 19.7 0.1 11 42-52 3-13 (78)
4 d1za0a1 a.25.1.2 (A:8-274) Pos 19.5 3.5 0.00025 27.6 -2.5 30 22-55 76-105 (267)
5 d2hf5a1 a.39.1.5 (A:81-113) Tr 18.3 32 0.0023 16.1 1.7 17 19-35 10-26 (33)
6 d1uqwa_ c.94.1.1 (A:) Hypothet 15.8 29 0.0021 21.5 1.4 12 28-39 78-89 (487)
7 d2d8ca1 a.60.1.2 (A:7-91) Sphi 14.8 17 0.0012 19.7 0.0 13 40-52 8-20 (85)
8 d1xfsa_ d.129.3.5 (A:) Hypothe 14.7 27 0.002 19.2 1.0 18 29-46 15-33 (165)
9 d1dgja2 d.15.4.2 (A:1-80) Alde 14.2 18 0.0013 19.9 0.0 11 2-12 25-35 (80)
10 d1n62a2 d.15.4.2 (A:3-81) Carb 13.9 18 0.0013 19.8 -0.0 11 2-12 25-35 (79)
No 1
>d1kw4a_ a.60.1.2 (A:) Polyhomeotic {Drosophila melanogaster [TaxId: 7227]}
Probab=55.99 E-value=0.56 Score=24.50 Aligned_cols=13 Identities=0% Similarity=-0.084 Sum_probs=9.9
Q ss_pred hccceecCcccee
Q psy11611 40 KSECCREDAGGQQ 52 (60)
Q Consensus 40 ~Sev~NWT~~~~~ 52 (60)
.|+|.+||+++|.
T Consensus 2 ~~pv~~Ws~~dV~ 14 (70)
T d1kw4a_ 2 RPPISSWSVDDVS 14 (70)
T ss_dssp CCCGGGCCHHHHH
T ss_pred CCchhcCCHHHHH
Confidence 4678888888775
No 2
>d1x53a1 d.129.3.5 (A:8-139) Activator of 90 kda heat shock protein ATPase homolog 1, AHSA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.54 E-value=10 Score=21.23 Aligned_cols=21 Identities=24% Similarity=0.219 Sum_probs=15.5
Q ss_pred ceeHHHHHHHHhhcc-ceecCc
Q psy11611 28 HVSVKELWDVWIKSE-CCREDA 48 (60)
Q Consensus 28 ~ISVedLW~~Wk~Se-v~NWT~ 48 (60)
..++|+||++|...+ +..|+-
T Consensus 13 ~ap~e~Vw~a~tdpe~l~~W~~ 34 (132)
T d1x53a1 13 LTSPEELYRVFTTQELVQAFTH 34 (132)
T ss_dssp SSCHHHHHHHTTCHHHHHHHSC
T ss_pred CCCHHHHHHHHcCHHHHHhhhC
Confidence 357899999998766 555653
No 3
>d1wwva1 a.60.1.2 (A:8-85) Connector enhancer of kinase suppressor of Ras 1, CNK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.84 E-value=10 Score=19.69 Aligned_cols=11 Identities=9% Similarity=-0.115 Sum_probs=7.1
Q ss_pred cceecCcccee
Q psy11611 42 ECCREDAGGQQ 52 (60)
Q Consensus 42 ev~NWT~~~~~ 52 (60)
+|..||+++|.
T Consensus 3 pv~~Wt~~~V~ 13 (78)
T d1wwva1 3 PVETWTPGKVA 13 (78)
T ss_dssp CTTTCCTTTHH
T ss_pred ChhhCCHHHHH
Confidence 46677777654
No 4
>d1za0a1 a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier protein] desaturase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=19.50 E-value=3.5 Score=27.59 Aligned_cols=30 Identities=23% Similarity=0.447 Sum_probs=16.2
Q ss_pred hcCCCcceeHHHHHHHHhhccceecCccceeecc
Q psy11611 22 HKNDDMHVSVKELWDVWIKSECCREDAGGQQHGG 55 (60)
Q Consensus 22 H~~D~~~ISVedLW~~Wk~Sev~NWT~~~~~~~~ 55 (60)
|+.=..+..+++-|..|. +.||.|+.+||-
T Consensus 76 ~~~l~~~f~~d~~w~~wv----~~WtaEEnrHg~ 105 (267)
T d1za0a1 76 HRELVEHFILEDWWGRWL----GRWTAEEHLHAI 105 (267)
T ss_dssp -----------CHHHHHH----HHHHHHHHHHHH
T ss_pred HHHHHHHhccchHHHHHH----hcccHHHhhHHH
Confidence 343233556677899995 579999999984
No 5
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=18.31 E-value=32 Score=16.06 Aligned_cols=17 Identities=29% Similarity=0.456 Sum_probs=13.2
Q ss_pred hhhhcCCCcceeHHHHH
Q psy11611 19 KAFHKNDDMHVSVKELW 35 (60)
Q Consensus 19 ~~fH~~D~~~ISVedLW 35 (60)
+.|=++-+-+||.+||=
T Consensus 10 ~~FDkDg~G~Is~~EL~ 26 (33)
T d2hf5a1 10 RVFDKDGNGYISAAELR 26 (33)
T ss_dssp HHHSSSCCSCBCHHHHH
T ss_pred HHhCCCCCCcCcHHHHH
Confidence 46777777799999983
No 6
>d1uqwa_ c.94.1.1 (A:) Hypothetical protein YliB {Escherichia coli [TaxId: 562]}
Probab=15.77 E-value=29 Score=21.51 Aligned_cols=12 Identities=0% Similarity=-0.208 Sum_probs=10.2
Q ss_pred ceeHHHHHHHHh
Q psy11611 28 HVSVKELWDVWI 39 (60)
Q Consensus 28 ~ISVedLW~~Wk 39 (60)
.||.+|+.-+|.
T Consensus 78 pvTa~Dv~~s~~ 89 (487)
T d1uqwa_ 78 DFNAAAVKANLD 89 (487)
T ss_dssp BCCHHHHHHHHH
T ss_pred CCcHHHHHHHHH
Confidence 799999987775
No 7
>d2d8ca1 a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.76 E-value=17 Score=19.71 Aligned_cols=13 Identities=8% Similarity=-0.174 Sum_probs=10.0
Q ss_pred hccceecCcccee
Q psy11611 40 KSECCREDAGGQQ 52 (60)
Q Consensus 40 ~Sev~NWT~~~~~ 52 (60)
..+|..||.++|.
T Consensus 8 ~~~V~~Ws~~dV~ 20 (85)
T d2d8ca1 8 MKEVVYWSPKKVA 20 (85)
T ss_dssp CSCCSSCCTTHHH
T ss_pred cCChhhCCHHHHH
Confidence 4478899998874
No 8
>d1xfsa_ d.129.3.5 (A:) Hypothetical protein NE0264 {Nitrosomonas europaea [TaxId: 915]}
Probab=14.74 E-value=27 Score=19.23 Aligned_cols=18 Identities=22% Similarity=0.291 Sum_probs=13.8
Q ss_pred eeHHHHHHHHhhcc-ceec
Q psy11611 29 VSVKELWDVWIKSE-CCRE 46 (60)
Q Consensus 29 ISVedLW~~Wk~Se-v~NW 46 (60)
-+++.||.+|...+ ...|
T Consensus 15 ap~e~Vw~a~tdpe~~~~W 33 (165)
T d1xfsa_ 15 VPVNLVWRGLTEPELLKKW 33 (165)
T ss_dssp SCHHHHHHHHHCHHHHTTT
T ss_pred CCHHHHHHHHcCHHHHhhc
Confidence 47899999999876 4445
No 9
>d1dgja2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=14.21 E-value=18 Score=19.95 Aligned_cols=11 Identities=27% Similarity=0.522 Sum_probs=8.4
Q ss_pred chhhhhccCCc
Q psy11611 2 SFLREELKYDD 12 (60)
Q Consensus 2 eFLREdl~y~d 12 (60)
+|||+++.+..
T Consensus 25 ~~LR~~~gltg 35 (80)
T d1dgja2 25 DVLRSQLQLTS 35 (80)
T ss_dssp HHHHHTTCCTT
T ss_pred HHHhhhhCCce
Confidence 68898887754
No 10
>d1n62a2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]}
Probab=13.91 E-value=18 Score=19.82 Aligned_cols=11 Identities=27% Similarity=0.573 Sum_probs=8.6
Q ss_pred chhhhhccCCc
Q psy11611 2 SFLREELKYDD 12 (60)
Q Consensus 2 eFLREdl~y~d 12 (60)
+|||+++++..
T Consensus 25 ~~LR~~~~ltg 35 (79)
T d1n62a2 25 HFIREQQNLTG 35 (79)
T ss_dssp HHHHHTSCCTT
T ss_pred HHHhhhcCCcc
Confidence 68998888764
Done!