Query psy11623
Match_columns 74
No_of_seqs 114 out of 1016
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 23:24:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11623.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11623hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mzw_A Cyclophilin H, U-snRNP- 99.9 1.2E-27 4.1E-32 153.4 8.4 72 1-72 13-84 (177)
2 1qng_A Peptidyl-prolyl CIS-tra 99.9 1.2E-27 4.1E-32 152.6 8.0 72 1-72 6-78 (170)
3 2z6w_A Peptidyl-prolyl CIS-tra 99.9 2.7E-27 9.2E-32 150.4 9.3 67 1-72 6-72 (165)
4 3pmp_A Cyclophilin A; peptidyl 99.9 3.1E-27 1.1E-31 149.8 9.3 67 1-72 5-71 (164)
5 2wfi_A Peptidyl-prolyl CIS-tra 99.9 4.3E-27 1.5E-31 151.1 9.8 72 1-72 12-86 (179)
6 1a58_A Cyclophilin; isomerase, 99.9 4.9E-27 1.7E-31 150.5 9.8 72 1-72 9-83 (177)
7 2poy_A Peptidyl-prolyl CIS-tra 99.9 3.8E-27 1.3E-31 152.2 9.1 72 1-72 22-95 (186)
8 2igv_A Peptidyl-prolyl CIS-tra 99.9 4.7E-27 1.6E-31 150.2 9.1 72 1-72 6-79 (173)
9 2haq_A Cyclophilin; rotamase, 99.9 4.9E-27 1.7E-31 150.2 8.6 67 1-72 14-80 (172)
10 2he9_A NK-tumor recognition pr 99.9 9.1E-27 3.1E-31 151.0 9.8 72 1-72 22-96 (192)
11 2cmt_A Peptidyl-prolyl CIS-tra 99.9 7.9E-27 2.7E-31 149.1 9.3 67 1-72 13-79 (172)
12 2r99_A Peptidyl-prolyl CIS-tra 99.9 1.3E-26 4.5E-31 148.2 9.3 67 1-72 14-80 (173)
13 1z81_A Cyclophilin; structural 99.9 1.8E-26 6.2E-31 153.0 9.0 72 1-72 62-133 (229)
14 3ich_A Peptidyl-prolyl CIS-tra 99.9 2.1E-26 7E-31 148.9 8.6 67 1-72 18-84 (188)
15 3k2c_A Peptidyl-prolyl CIS-tra 99.9 3.1E-26 1.1E-30 148.6 9.4 67 1-72 30-96 (193)
16 4fru_A Cyclophilin B, peptidyl 99.9 2.2E-26 7.6E-31 148.3 8.6 67 1-72 15-81 (185)
17 3rdd_A Peptidyl-prolyl CIS-tra 99.9 2.3E-26 7.8E-31 148.3 8.6 67 1-72 25-91 (184)
18 1ihg_A Cyclophilin 40; ppiase 99.9 1E-25 3.6E-30 155.0 9.4 72 1-72 18-92 (370)
19 2ose_A Probable peptidyl-proly 99.9 4.8E-26 1.6E-30 151.3 7.3 71 1-71 17-99 (234)
20 2c3b_A Ppiase, cyclophilin; is 99.9 8.1E-26 2.8E-30 144.4 7.3 66 1-71 5-75 (172)
21 1v9t_A Cyclophilin B; beta bar 99.9 4.7E-23 1.6E-27 130.8 7.5 54 9-70 10-63 (166)
22 2poe_A Cyclophilin-like protei 99.9 6.5E-23 2.2E-27 132.3 6.6 58 2-68 16-73 (185)
23 2ok3_A Peptidyl-prolyl CIS-tra 99.9 1.1E-22 3.8E-27 128.6 6.6 53 9-69 6-58 (161)
24 1lop_A Cyclophilin A; rotamase 99.9 6E-23 2E-27 130.1 5.0 54 9-70 5-58 (164)
25 3s6m_A Peptidyl-prolyl CIS-tra 99.9 5.3E-23 1.8E-27 130.5 4.7 54 9-70 9-62 (167)
26 2a2n_A Peptidylprolyl isomeras 99.9 2.1E-22 7.3E-27 129.0 6.0 57 5-69 23-79 (176)
27 2fu0_A Cyclophilin, putative; 99.9 3.1E-22 1.1E-26 126.5 6.4 54 8-69 10-63 (160)
28 2x7k_A Peptidyl-prolyl CIS-tra 99.9 4.7E-22 1.6E-26 126.3 5.9 53 9-69 17-69 (166)
29 1zkc_A Peptidyl-prolyl CIS-tra 99.9 1E-21 3.5E-26 127.8 7.0 54 8-69 24-77 (197)
30 2b71_A Cyclophilin-like protei 99.9 1.1E-21 3.7E-26 127.6 6.6 53 9-69 44-96 (196)
31 2hq6_A Serologically defined c 99.8 1E-21 3.4E-26 126.7 6.3 52 9-68 30-81 (185)
32 3bkp_A Cyclophilin; malaria, i 99.8 1.3E-21 4.6E-26 129.8 7.0 53 9-69 27-79 (232)
33 2k7n_A Peptidyl-prolyl CIS-tra 99.8 1.9E-21 6.5E-26 127.0 6.3 53 9-69 17-69 (203)
34 1w74_A Peptidyl-prolyl CIS-tra 99.8 4E-21 1.4E-25 124.5 6.9 61 8-68 28-95 (191)
35 3bo7_A Peptidyl-prolyl CIS-tra 99.8 4.2E-21 1.4E-25 125.0 6.9 53 8-68 11-68 (201)
36 3rfy_A Peptidyl-prolyl CIS-tra 99.8 6.4E-20 2.2E-24 128.3 5.9 51 10-69 185-235 (369)
37 2nnz_A Hypothetical protein; b 89.1 0.42 1.4E-05 29.5 3.4 22 13-34 39-60 (153)
38 3kop_A Uncharacterized protein 88.8 0.64 2.2E-05 29.7 4.2 32 2-35 23-55 (188)
39 2qsw_A Methionine import ATP-b 32.1 64 0.0022 17.5 4.3 26 8-35 62-87 (100)
40 2qrr_A Methionine import ATP-b 30.2 70 0.0024 17.4 4.3 28 7-36 61-88 (101)
41 3dhx_A Methionine import ATP-b 30.1 74 0.0025 17.6 4.3 28 7-36 59-86 (106)
42 3ced_A Methionine import ATP-b 25.6 89 0.003 17.0 4.5 28 7-35 58-85 (98)
43 3q6c_A Probable receptor YHHM; 24.5 30 0.001 19.1 1.2 28 28-59 54-81 (83)
44 2ftc_I Mitochondrial ribosomal 20.1 91 0.0031 18.0 2.7 30 10-39 84-113 (118)
No 1
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=99.95 E-value=1.2e-27 Score=153.42 Aligned_cols=72 Identities=71% Similarity=1.185 Sum_probs=66.1
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||+++++..+++++|+++.||||+|+|||||||+..++|
T Consensus 13 v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G 84 (177)
T 1mzw_A 13 VFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDG 84 (177)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCC
Confidence 699999999999999999999999999999999999988655667789999999999999999999976543
No 2
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=99.95 E-value=1.2e-27 Score=152.59 Aligned_cols=72 Identities=42% Similarity=0.786 Sum_probs=65.0
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhc-CcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTG-EFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~-~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||++ +++..+++++|+++.||||+|+||||+||+..++|
T Consensus 6 v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g 78 (170)
T 1qng_A 6 VFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNG 78 (170)
T ss_dssp EEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred EEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCC
Confidence 6999999999999999999999999999999999986 44445678889999999999999999999976543
No 3
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=99.94 E-value=2.7e-27 Score=150.35 Aligned_cols=67 Identities=52% Similarity=0.880 Sum_probs=62.2
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||+|+. +++|+++.||||+|+||||+||+..++|
T Consensus 6 v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~-----g~~Y~g~~fhRvi~~f~iQgGd~~~~~g 72 (165)
T 2z6w_A 6 VYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEK-----GFGYKGSTFHRVIPSFMCQAGDFTNHNG 72 (165)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT-----SCCSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCC-----CccCcCCEEEEEECCCEEEeCCccCCCC
Confidence 699999999999999999999999999999999999775 5679999999999999999999976543
No 4
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=99.94 E-value=3.1e-27 Score=149.85 Aligned_cols=67 Identities=43% Similarity=0.825 Sum_probs=62.0
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
|||||++++++.|+|+||||.+.||+||+||++||+++. +++|+++.|||++|+||||+||+..++|
T Consensus 5 vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~-----g~~Y~g~~fhRvi~~f~iQgGd~~~~~g 71 (164)
T 3pmp_A 5 VFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQH-----GFGYKDSIFHRVIPQFMLQGGDFTRHNG 71 (164)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT-----SCSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccC-----CCcccCCEEEEEECCCeEEeCCCCCCCC
Confidence 699999999999999999999999999999999999876 5679999999999999999999765543
No 5
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=99.94 E-value=4.3e-27 Score=151.09 Aligned_cols=72 Identities=49% Similarity=0.845 Sum_probs=63.2
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcc---cCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFR---RDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~---~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
|||||++++++.|+|+||||.+.||+||+||++||+++++ ...+...|+++.||||+|+||||+||+..++|
T Consensus 12 vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g 86 (179)
T 2wfi_A 12 CFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNG 86 (179)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCC
Confidence 6999999999999999999999999999999999997653 12234559999999999999999999986553
No 6
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=99.94 E-value=4.9e-27 Score=150.52 Aligned_cols=72 Identities=40% Similarity=0.761 Sum_probs=62.7
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccC---CcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRD---AVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~---~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
|||||++++++.|+|+||||.+.||+||+||++||+++++.. ++++.|+++.||||+|+|||||||+..++|
T Consensus 9 v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g 83 (177)
T 1a58_A 9 VFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDG 83 (177)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSS
T ss_pred EEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCC
Confidence 699999999999999999999999999999999999855311 234459999999999999999999986543
No 7
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=99.94 E-value=3.8e-27 Score=152.19 Aligned_cols=72 Identities=46% Similarity=0.795 Sum_probs=64.8
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCc--ccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEF--RRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~--~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||+++. +..+++++|+++.||||+|+||||+||+..++|
T Consensus 22 v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G 95 (186)
T 2poy_A 22 VYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDG 95 (186)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred EEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCC
Confidence 699999999999999999999999999999999998754 345677889999999999999999999986553
No 8
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=99.94 E-value=4.7e-27 Score=150.17 Aligned_cols=72 Identities=49% Similarity=0.868 Sum_probs=63.7
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcc--cCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFR--RDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~--~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||+++++ ..++++.|+++.||||+|+|||||||+..++|
T Consensus 6 v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (173)
T 2igv_A 6 VFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNG 79 (173)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCC
Confidence 6999999999999999999999999999999999998532 33455569999999999999999999986553
No 9
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=99.94 E-value=4.9e-27 Score=150.18 Aligned_cols=67 Identities=48% Similarity=0.858 Sum_probs=61.6
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
|||||++++++.|+|+||||.+.||+||+||++||+|+. +++|+++.||||+|+|||||||+..++|
T Consensus 14 v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~-----g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 80 (172)
T 2haq_A 14 VYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEH-----GFGYKDSIFHRVIQNFMIQGGDFTNFDG 80 (172)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT-----SCCSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCC-----CcccCCCEEEEEECCCEEecCCccCCCC
Confidence 699999999999999999999999999999999998766 5569999999999999999999766543
No 10
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=99.94 E-value=9.1e-27 Score=151.03 Aligned_cols=72 Identities=42% Similarity=0.811 Sum_probs=63.0
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcc---cCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFR---RDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~---~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
|||||++.+++.|+|+||||.+.||+||+||++||+++++ ..++...|+++.||||+|+||||+||+..++|
T Consensus 22 vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G 96 (192)
T 2he9_A 22 CHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNG 96 (192)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCC
Confidence 6999999999999999999999999999999999997653 11234459999999999999999999986543
No 11
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=99.94 E-value=7.9e-27 Score=149.12 Aligned_cols=67 Identities=46% Similarity=0.833 Sum_probs=61.7
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||+++. +++|+++.||||+|+|||||||+..++|
T Consensus 13 v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~-----g~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (172)
T 2cmt_A 13 VFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGER-----GFGYHNCCFHRVIPQFMCQGGDFVKGDG 79 (172)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT-----SCSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCC-----CceECCCEEEEEECCCEEEcCCccCCCC
Confidence 699999999999999999999999999999999999864 4559999999999999999999986553
No 12
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=99.94 E-value=1.3e-26 Score=148.15 Aligned_cols=67 Identities=49% Similarity=0.760 Sum_probs=61.5
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||+++. +++|+++.||||+|+||||+||+..++|
T Consensus 14 v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~-----g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 80 (173)
T 2r99_A 14 VYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK-----GFGFKGSSFHRIIPQFMCQGGDFTNHNG 80 (173)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT-----SCCSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccC-----CceecCCEEEEeeCCCEEEeCCcCCCCC
Confidence 699999999999999999999999999999999998765 4459999999999999999999986543
No 13
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=99.94 E-value=1.8e-26 Score=153.03 Aligned_cols=72 Identities=53% Similarity=0.993 Sum_probs=64.8
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||+++++..++++.|+++.||||+|+|||||||+..++|
T Consensus 62 V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G 133 (229)
T 1z81_A 62 VFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNG 133 (229)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSS
T ss_pred EEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCC
Confidence 699999999999999999999999999999999999986433455679999999999999999999976543
No 14
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.93 E-value=2.1e-26 Score=148.93 Aligned_cols=67 Identities=49% Similarity=0.837 Sum_probs=61.4
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
|||||++++++.|+|+||||.+.||+||+||++||+++. +++|+++.||||+|+|||||||+..++|
T Consensus 18 v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~-----g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 84 (188)
T 3ich_A 18 VYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEK-----GFGYKNSKFHRVIKDFMIQGGDFTRGDG 84 (188)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT-----SCSSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccC-----CccccCCEEEEEECCCEEEcCCccCCCC
Confidence 699999999999999999999999999999999998765 4569999999999999999999766543
No 15
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=99.93 E-value=3.1e-26 Score=148.58 Aligned_cols=67 Identities=39% Similarity=0.773 Sum_probs=61.8
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||+++. +++|+++.||||+|+|||||||+..++|
T Consensus 30 v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~-----g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 96 (193)
T 3k2c_A 30 VYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPK-----GEGYKGSTFHRIIPGFMVQGGDYTAHNG 96 (193)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCT-----TSSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred EEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhcccc-----CCcccCCEEEEEeCCCEEEeCCCCCCCC
Confidence 699999999999999999999999999999999999876 5569999999999999999999776543
No 16
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.93 E-value=2.2e-26 Score=148.28 Aligned_cols=67 Identities=48% Similarity=0.806 Sum_probs=61.0
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
|||||++++++.|+|+||||.+.||+||+||++||++++ ++.|+++.|||++|+|||||||+..++|
T Consensus 15 v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~-----g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 81 (185)
T 4fru_A 15 VYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEK-----GFGYKDSKFHRVIKDFMIQGGDFTRGDG 81 (185)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTT-----SCCSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCC-----CCeEcCCEEEEeeCCCeEEECCCCCCCC
Confidence 699999999999999999999999999999999999853 3339999999999999999999986554
No 17
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=99.93 E-value=2.3e-26 Score=148.27 Aligned_cols=67 Identities=51% Similarity=0.860 Sum_probs=62.5
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||++++ +++|+++.||||+|+|||||||+..++|
T Consensus 25 v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~-----g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 91 (184)
T 3rdd_A 25 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEK-----GFGYKGSCFHRIIPGFMCQGGDFTRHNG 91 (184)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTT-----SCSSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred EEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCc-----CcccCCCEEEEccCCcEEEeCCCCCCCC
Confidence 699999999999999999999999999999999999887 6679999999999999999999876544
No 18
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.93 E-value=1e-25 Score=154.96 Aligned_cols=72 Identities=53% Similarity=0.935 Sum_probs=63.7
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCccc---CCcccccCCCeEEEEecCCEEEeccCCCCCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRR---DAVPIGFKGASFHRVIKDFMIQGGDFVNVSM 72 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~---~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~g 72 (74)
||||+++++++.|+|+||||.+.||+||+||++||+++++. .++++.|+|+.||||+|+|||||||+..++|
T Consensus 18 v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g 92 (370)
T 1ihg_A 18 VFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNG 92 (370)
T ss_dssp EEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred EEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCC
Confidence 69999999999999999999999999999999999996531 1334569999999999999999999986654
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.93 E-value=4.8e-26 Score=151.31 Aligned_cols=71 Identities=28% Similarity=0.477 Sum_probs=59.6
Q ss_pred CeEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcc------------cCCcccccCCCeEEEEecCCEEEeccCC
Q psy11623 1 MSFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFR------------RDAVPIGFKGASFHRVIKDFMIQGGDFV 68 (74)
Q Consensus 1 v~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~------------~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~ 68 (74)
|||||++++++.|+|+||||.+.||+||+||++||+++.. ..+++++|+++.||||+|+|||||||+.
T Consensus 17 v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~~ 96 (234)
T 2ose_A 17 VYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIY 96 (234)
T ss_dssp EEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCCC
T ss_pred EEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCcc
Confidence 6999999999999999999999999999999999998621 0133478999999999999999999976
Q ss_pred CCC
Q psy11623 69 NVS 71 (74)
Q Consensus 69 ~~~ 71 (74)
.++
T Consensus 97 ~g~ 99 (234)
T 2ose_A 97 NSN 99 (234)
T ss_dssp ---
T ss_pred CCC
Confidence 554
No 20
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=99.92 E-value=8.1e-26 Score=144.38 Aligned_cols=66 Identities=41% Similarity=0.829 Sum_probs=56.1
Q ss_pred CeEeeeeC--Ce---eeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCCC
Q psy11623 1 MSFPTGTP--TK---EIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNVS 71 (74)
Q Consensus 1 v~~di~~~--~~---~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~~ 71 (74)
|||||+++ +. +.|+|+||||.+.||+||+||++||++++ +++|+++.||||+|+||||+||+..++
T Consensus 5 vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~-----g~~Y~g~~fhRvi~~f~iQgGd~~~~~ 75 (172)
T 2c3b_A 5 VFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPA-----GEGYRESTFHRIIPNFMIQGGDFTRGN 75 (172)
T ss_dssp EEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCT-----TTSSTTCBCCEEETTTEEEECC-----
T ss_pred EEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCC-----CcccCCCEEEEEeCCCEEEeCCcCCCC
Confidence 69999998 64 45999999999999999999999999876 456999999999999999999966544
No 21
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.88 E-value=4.7e-23 Score=130.76 Aligned_cols=54 Identities=37% Similarity=0.700 Sum_probs=51.3
Q ss_pred CeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCC
Q psy11623 9 TKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 70 (74)
Q Consensus 9 ~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~ 70 (74)
.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+...
T Consensus 10 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~~ 63 (166)
T 1v9t_A 10 TTSAGNIELELDKQKAPVSVQNFVDYVNSGF--------YNNTTFHRVIPGFMIQGGGFTEQ 63 (166)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBEEEEETTTEEEESSBCTT
T ss_pred EeCCccEEEEEcCCCCcHHHHHHHHHhccCC--------CCCCEEEEEECCcEEEcCCcCcC
Confidence 3778999999999999999999999999999 99999999999999999999865
No 22
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=99.88 E-value=6.5e-23 Score=132.25 Aligned_cols=58 Identities=34% Similarity=0.600 Sum_probs=54.0
Q ss_pred eEeeeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCC
Q psy11623 2 SFPTGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFV 68 (74)
Q Consensus 2 ~~di~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~ 68 (74)
++++.+. |+.|+|+||||.+.||+||+||++||++++ |+++.||||+|+|||||||+.
T Consensus 16 ~~~v~i~-t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~ 73 (185)
T 2poe_A 16 FQGVRII-TNYGDLKFELFCSQCPKACKNFLALSASGY--------YKNTIFHKNIKGFIIQGGDPT 73 (185)
T ss_dssp CCEEEEE-ETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTEEEEEECTTSEEEEEETT
T ss_pred ceEEEEE-ecCccEEEEEeCCCCcHHHHHHHHHhccCC--------CCCCEEEEEECCCEEEcCCCC
Confidence 4556665 889999999999999999999999999999 999999999999999999987
No 23
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=99.87 E-value=1.1e-22 Score=128.60 Aligned_cols=53 Identities=40% Similarity=0.822 Sum_probs=50.7
Q ss_pred CeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCC
Q psy11623 9 TKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 69 (74)
Q Consensus 9 ~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~ 69 (74)
.|+.|+|+||||.+.||+||+||++||++++ |+++.||||+|+|||||||+..
T Consensus 6 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~fhRvi~~f~iQgGd~~~ 58 (161)
T 2ok3_A 6 HTDVGDIKIEVFCERTPKTCENFLALCASNY--------YNGCIFHRNIKGFMVQTGDPTG 58 (161)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBCCEEETTTEEEECCTTS
T ss_pred EeCCccEEEEEcCCCCcHHHHHHHHHhhhcc--------cCCCEEEEEECCCEEecCCCCC
Confidence 4889999999999999999999999999999 9999999999999999999873
No 24
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.87 E-value=6e-23 Score=130.09 Aligned_cols=54 Identities=39% Similarity=0.785 Sum_probs=51.2
Q ss_pred CeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCC
Q psy11623 9 TKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 70 (74)
Q Consensus 9 ~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~ 70 (74)
.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+..+
T Consensus 5 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~~ 58 (164)
T 1lop_A 5 HTNHGDIVIKTFDDKAPETVKNFLDYCREGF--------YNNTIFHRVINGFMIQGGGFEPG 58 (164)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHTTT--------TTTEECCEEETTTEEEESSEETT
T ss_pred EeCCCCEEEEEeCCCCcHHHHHHHHHHhcCC--------CCCCEEEEEeCCceEecCCcccC
Confidence 5789999999999999999999999999999 99999999999999999998753
No 25
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=99.87 E-value=5.3e-23 Score=130.52 Aligned_cols=54 Identities=41% Similarity=0.644 Sum_probs=51.5
Q ss_pred CeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCCC
Q psy11623 9 TKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVNV 70 (74)
Q Consensus 9 ~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~~ 70 (74)
.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+...
T Consensus 9 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~~ 62 (167)
T 3s6m_A 9 HTNHGVIKLELDEAKAPKTVENFLNYVKKGH--------YDGTIFHRVINGFMIQGGGFEPG 62 (167)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHHTT--------TTTEECCEEETTTEEEESSEETT
T ss_pred EeCCceEEEEEeCCCCcHHHHHHHHHhhhcc--------cCCCEeEEecCCcEEEeccccCC
Confidence 5889999999999999999999999999999 99999999999999999998754
No 26
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.86 E-value=2.1e-22 Score=128.99 Aligned_cols=57 Identities=37% Similarity=0.626 Sum_probs=53.0
Q ss_pred eeeCCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCC
Q psy11623 5 TGTPTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 69 (74)
Q Consensus 5 i~~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~ 69 (74)
..+..|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+..
T Consensus 23 ~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~~ 79 (176)
T 2a2n_A 23 SAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGY--------YNGHTFHRIIKGFMIQTGDPTG 79 (176)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBCCEEETTTEEEECCTTS
T ss_pred EEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCc--------cCCCEEEEEECCcEEEccCCCC
Confidence 44567889999999999999999999999999999 9999999999999999999863
No 27
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=99.86 E-value=3.1e-22 Score=126.51 Aligned_cols=54 Identities=33% Similarity=0.549 Sum_probs=51.2
Q ss_pred CCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCC
Q psy11623 8 PTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 69 (74)
Q Consensus 8 ~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~ 69 (74)
-.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+..
T Consensus 10 ~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~fhRvi~~f~iQgGd~~~ 63 (160)
T 2fu0_A 10 IYTTMGDIHISLFYKECKKTVQNFSVHSINGY--------YNNCIFHRVIKHFMVQTGDPSG 63 (160)
T ss_dssp EEETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBCCEEETTTEEEECCTTS
T ss_pred EEecCccEEEEEeCCCChHHHHHHHHHhccCc--------cCCCEEEEEECCCEEEeCCcCC
Confidence 46789999999999999999999999999999 9999999999999999999863
No 28
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=99.86 E-value=4.7e-22 Score=126.32 Aligned_cols=53 Identities=42% Similarity=0.834 Sum_probs=50.4
Q ss_pred CeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCC
Q psy11623 9 TKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 69 (74)
Q Consensus 9 ~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~ 69 (74)
.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+..
T Consensus 17 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Y~g~~fhRvi~~f~iQgGd~~~ 69 (166)
T 2x7k_A 17 ETSMGIIVLELYWKHAPKTCKNFAELARRGY--------YNGTKFHRIIKDFMIQGGDPTG 69 (166)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHHTT--------TTTEECCEEETTTEEEECCTTS
T ss_pred EeCCCcEEEEEccCCCCHHHHHHHHHHhcCC--------CCCCEEEEEECCCEEEcCCCCC
Confidence 4678999999999999999999999999999 9999999999999999999873
No 29
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.85 E-value=1e-21 Score=127.80 Aligned_cols=54 Identities=41% Similarity=0.805 Sum_probs=51.1
Q ss_pred CCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCC
Q psy11623 8 PTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 69 (74)
Q Consensus 8 ~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~ 69 (74)
-.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+..
T Consensus 24 l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~--------Ydg~~FhRVi~~f~iQgGd~~~ 77 (197)
T 1zkc_A 24 LHTNKGDLNLELHCDLTPKTCENFIRLCKKHY--------YDGTIFHRSIRNFVIQGGDPTG 77 (197)
T ss_dssp EEETTEEEEEEECTTTSHHHHHHHHHHHHTTT--------TTTEEEEEEETTTEEEECCTTS
T ss_pred EEeCCccEEEEEcCCCCcHHHHHHHHHHhcCC--------CCCCEEEEEeCCCEEEcCCCCC
Confidence 35788999999999999999999999999999 9999999999999999999873
No 30
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=99.85 E-value=1.1e-21 Score=127.55 Aligned_cols=53 Identities=40% Similarity=0.676 Sum_probs=50.5
Q ss_pred CeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCC
Q psy11623 9 TKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 69 (74)
Q Consensus 9 ~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~ 69 (74)
.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+..
T Consensus 44 ~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~--------Y~g~~FhRVi~~f~iQgGd~~~ 96 (196)
T 2b71_A 44 YTNLGDFEVELYWYHSPKTCLNFYTLCEMGF--------YDNTIFHRVIPNFVIQGGDPTG 96 (196)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHTTT--------TTTEEEEEEETTTEEEEEETTS
T ss_pred EeCCCCEEEEEeCCCCcHHHHHHHHHhhcCC--------cCCCEEEEEeCCcEEEcCCCCC
Confidence 4678999999999999999999999999999 9999999999999999999873
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=99.85 E-value=1e-21 Score=126.71 Aligned_cols=52 Identities=35% Similarity=0.729 Sum_probs=49.7
Q ss_pred CeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCC
Q psy11623 9 TKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFV 68 (74)
Q Consensus 9 ~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~ 68 (74)
.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+.
T Consensus 30 ~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~--------Y~g~~FhRvi~~f~iQgGd~~ 81 (185)
T 2hq6_A 30 KTTAGDIDIELWSKEAPKACRNFIQLCLEAY--------YDNTIFHRVVPGFIVQGGDPT 81 (185)
T ss_dssp EETTEEEEEEEBTTTCHHHHHHHHHHHHTTT--------TTTEECCEEETTTEEEECCTT
T ss_pred EeCCccEEEEEeCCCCcHHHHHHHHHhhcCc--------cCCCEEEEEECCCEEEcCCCC
Confidence 3568999999999999999999999999999 999999999999999999986
No 32
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.85 E-value=1.3e-21 Score=129.81 Aligned_cols=53 Identities=38% Similarity=0.741 Sum_probs=50.4
Q ss_pred CeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCC
Q psy11623 9 TKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 69 (74)
Q Consensus 9 ~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~ 69 (74)
.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+|||||||+..
T Consensus 27 ~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~--------Ydgt~FhRVi~~FmiQgGdp~~ 79 (232)
T 3bkp_A 27 HTSLGDLDVELWARECPLACRNFVQLCLEGY--------YVNTIFHRVVKDFIVQGGDPTG 79 (232)
T ss_dssp EETTEEEEEEEBTTTCHHHHHHHHHHHHHTT--------TTTCBEEEEETTTEEEECCTTS
T ss_pred EECCCcEEEEEcCCCCcHHHHHHHHHhhcCc--------cCCCEEEEEeCCCEEEcCCCCC
Confidence 4678999999999999999999999999999 9999999999999999999873
No 33
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=99.84 E-value=1.9e-21 Score=127.01 Aligned_cols=53 Identities=42% Similarity=0.834 Sum_probs=50.4
Q ss_pred CeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCC
Q psy11623 9 TKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 69 (74)
Q Consensus 9 ~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~ 69 (74)
.|+.|+|+||||.+.||+||+||++||+.++ |+++.||||+|+||||+||+..
T Consensus 17 ~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~--------Ydg~~FhRVi~~F~iQgGd~~~ 69 (203)
T 2k7n_A 17 ETSMGIIVLELYWKHAPKTCKNFAELARRGY--------YNGTKFHRIIKDFMIQGGDPTG 69 (203)
T ss_dssp EESSCEEEEEECTTTCTTHHHHHHHHHHHTC--------GGGCEEEEEETTTEEEEECSSS
T ss_pred EeCCCcEEEEEccCCCcHHHHHHHHHHhcCc--------cCCCEEEEEeCCcEEEcCCCCC
Confidence 5678999999999999999999999999999 9999999999999999999873
No 34
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=99.84 E-value=4e-21 Score=124.45 Aligned_cols=61 Identities=38% Similarity=0.558 Sum_probs=51.9
Q ss_pred CCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccC-------CcccccCCCeEEEEecCCEEEeccCC
Q psy11623 8 PTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRD-------AVPIGFKGASFHRVIKDFMIQGGDFV 68 (74)
Q Consensus 8 ~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~-------~~~~~Y~~~~f~ri~~~~~iq~Gd~~ 68 (74)
-.++.|+|+||||.+.||+||+||++||+|+++.. .+...|+++.||||+|+|||||||+.
T Consensus 28 l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~ 95 (191)
T 1w74_A 28 LHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT 95 (191)
T ss_dssp EEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT
T ss_pred EEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC
Confidence 35788999999999999999999999998876411 02245999999999999999999985
No 35
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=99.84 E-value=4.2e-21 Score=125.01 Aligned_cols=53 Identities=36% Similarity=0.739 Sum_probs=49.8
Q ss_pred CCeeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEec-----cCC
Q psy11623 8 PTKEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGG-----DFV 68 (74)
Q Consensus 8 ~~~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~G-----d~~ 68 (74)
-.|+.|+|+||||.+.||+||+||++||+.++ |+|+.||||+|+|||||| |+.
T Consensus 11 l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~--------Ydg~~FhRvi~~f~iQgG~~~~~Dp~ 68 (201)
T 3bo7_A 11 IVTTQGSLNIELHADMAPRACDSFLRLCAVKY--------FDDTIFHRCIRNFMIQGGRAELRQPS 68 (201)
T ss_dssp EEETTEEEEEEECTTTCHHHHHHHHHHHHTTT--------TTTCBEEEEETTTEEEECCGGGCCC-
T ss_pred EEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCc--------cCCCEEEEeeCCCEEEcCcccccCCC
Confidence 35778999999999999999999999999999 999999999999999999 986
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.79 E-value=6.4e-20 Score=128.25 Aligned_cols=51 Identities=25% Similarity=0.337 Sum_probs=48.8
Q ss_pred eeeeeEEEEecCCCChhhHHHHHHHHhcCcccCCcccccCCCeEEEEecCCEEEeccCCC
Q psy11623 10 KEIGRMIFELFADVVPKTSENFRQFCTGEFRRDAVPIGFKGASFHRVIKDFMIQGGDFVN 69 (74)
Q Consensus 10 ~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~~~iq~Gd~~~ 69 (74)
+..|+|+||||.+.||+||+||++||+.++ |+|+.|||| |+|||||||+..
T Consensus 185 ~~~G~I~IeL~~d~AP~Tv~NFl~L~~~Gf--------YdGt~FHRV-~gFmIQgGDp~g 235 (369)
T 3rfy_A 185 IEDCVFRIVLDGYNAPVTAGNFVDLVERHF--------YDGMEIQRS-DGFVVQTGDPEG 235 (369)
T ss_dssp CSEEEEEEEEETTTCHHHHHHHHHHHHTTT--------TTTEECEEE-EEEEECCCCCCC
T ss_pred ccceEEEEEEeCCCCcHHHHHHHHHhhcCC--------cCCCeeeee-CCeeEecCCCCC
Confidence 368999999999999999999999999999 999999999 999999999974
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=89.08 E-value=0.42 Score=29.48 Aligned_cols=22 Identities=18% Similarity=0.300 Sum_probs=19.8
Q ss_pred eeEEEEecCCCChhhHHHHHHH
Q psy11623 13 GRMIFELFADVVPKTSENFRQF 34 (74)
Q Consensus 13 G~i~ieL~~~~~P~t~~nF~~l 34 (74)
..++++|+++.||+||+.|+++
T Consensus 39 ~~~~a~L~D~~aP~Ta~~f~~~ 60 (153)
T 2nnz_A 39 AECEVELYEEWAPETVRAIADA 60 (153)
T ss_dssp EEEEECCCTTSCHHHHHHHHHT
T ss_pred EEEEEEEcCCCCHHHHHHHHHh
Confidence 5689999999999999999875
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=88.85 E-value=0.64 Score=29.72 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=23.7
Q ss_pred eEeeeeCCeeee-eEEEEecCCCChhhHHHHHHHH
Q psy11623 2 SFPTGTPTKEIG-RMIFELFADVVPKTSENFRQFC 35 (74)
Q Consensus 2 ~~di~~~~~~~G-~i~ieL~~~~~P~t~~nF~~l~ 35 (74)
|+.|++... | ..+.+|..+.||+||+-|.++-
T Consensus 23 ~i~itl~~~--g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 23 YINITLEKR--GVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp EEEEEETTT--TEEEEEEECTTTSHHHHHHHHHHC
T ss_pred EEEEEEecC--CeEEEEEEccccChHHHHHHHHhC
Confidence 455555432 3 3688999999999999998853
No 39
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=32.07 E-value=64 Score=17.49 Aligned_cols=26 Identities=8% Similarity=0.114 Sum_probs=18.6
Q ss_pred CCeeeeeEEEEecCCCChhhHHHHHHHH
Q psy11623 8 PTKEIGRMIFELFADVVPKTSENFRQFC 35 (74)
Q Consensus 8 ~~~~~G~i~ieL~~~~~P~t~~nF~~l~ 35 (74)
.+.+.|+++++|-.+ +...+..++.-
T Consensus 62 ~~~~~G~L~v~l~G~--~~~~~~ai~~L 87 (100)
T 2qsw_A 62 KQGAVGSLYIQLLGE--EQNILAAIEGL 87 (100)
T ss_dssp TTEEEEEEEEEEESC--HHHHHHHHHHH
T ss_pred CCeeEEEEEEEEECC--HHHHHHHHHHH
Confidence 678999999999876 33455555444
No 40
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=30.21 E-value=70 Score=17.36 Aligned_cols=28 Identities=18% Similarity=0.329 Sum_probs=19.4
Q ss_pred eCCeeeeeEEEEecCCCChhhHHHHHHHHh
Q psy11623 7 TPTKEIGRMIFELFADVVPKTSENFRQFCT 36 (74)
Q Consensus 7 ~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~ 36 (74)
+.+.+.|+++++|-.+ +...+..++.-+
T Consensus 61 i~~~~~G~L~v~l~G~--~~~~~~ai~~L~ 88 (101)
T 2qrr_A 61 AGGVKFGMMVAELFGN--EQDDSAAIEYLR 88 (101)
T ss_dssp ETTEEEEEEEEEEESC--HHHHHHHHHHHH
T ss_pred cCCeeEEEEEEEEeCC--HHHHHHHHHHHH
Confidence 3678999999999876 334555554443
No 41
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=30.15 E-value=74 Score=17.57 Aligned_cols=28 Identities=11% Similarity=0.189 Sum_probs=19.5
Q ss_pred eCCeeeeeEEEEecCCCChhhHHHHHHHHh
Q psy11623 7 TPTKEIGRMIFELFADVVPKTSENFRQFCT 36 (74)
Q Consensus 7 ~~~~~~G~i~ieL~~~~~P~t~~nF~~l~~ 36 (74)
+.+++.|+++++|-++ +...+..+++-+
T Consensus 59 i~~~~~G~L~v~l~G~--~~~~~~ai~~L~ 86 (106)
T 3dhx_A 59 AGGVKFGIMLTEMHGT--QQDTQAAIAWLQ 86 (106)
T ss_dssp ETTEEEEEEEEEEESC--HHHHHHHHHHHH
T ss_pred ECCeeEEEEEEEEeCC--HHHHHHHHHHHH
Confidence 3778999999999986 334555544443
No 42
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=25.64 E-value=89 Score=17.03 Aligned_cols=28 Identities=11% Similarity=0.090 Sum_probs=18.8
Q ss_pred eCCeeeeeEEEEecCCCChhhHHHHHHHH
Q psy11623 7 TPTKEIGRMIFELFADVVPKTSENFRQFC 35 (74)
Q Consensus 7 ~~~~~~G~i~ieL~~~~~P~t~~nF~~l~ 35 (74)
+.+.+.|+++++|-.+ .+...+..++.-
T Consensus 58 i~~~~~G~L~v~l~G~-~~~~~~~ai~~L 85 (98)
T 3ced_A 58 TKNGTVGFLVLHIPYI-SSVDFGKFEKEL 85 (98)
T ss_dssp ETTEEEEEEEEEESCC-CHHHHHHHHHHH
T ss_pred eCCEeEEEEEEEEeCC-CHHHHHHHHHHH
Confidence 3678999999999873 234455555443
No 43
>3q6c_A Probable receptor YHHM; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.60A {Klebsiella variicola at-22}
Probab=24.55 E-value=30 Score=19.10 Aligned_cols=28 Identities=18% Similarity=0.443 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCcccCCcccccCCCeEEEEecC
Q psy11623 28 SENFRQFCTGEFRRDAVPIGFKGASFHRVIKD 59 (74)
Q Consensus 28 ~~nF~~l~~~~~~~~~~~~~Y~~~~f~ri~~~ 59 (74)
..-+-.|+.|.. ..++|+|+.|..-.|+
T Consensus 54 ~~~Y~~l~~Gd~----G~Lt~QGTRF~~F~~~ 81 (83)
T 3q6c_A 54 APQYHALSVGDR----GMLSYKGTAFVAFTPD 81 (83)
T ss_dssp HHHHHHCCTTCE----EEEEEETTEEEEEEEC
T ss_pred HHHcCCCCCCCE----EEEEEeeeEEEEEecC
Confidence 446777888876 3577999999987765
No 44
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=20.13 E-value=91 Score=17.98 Aligned_cols=30 Identities=13% Similarity=0.217 Sum_probs=21.3
Q ss_pred eeeeeEEEEecCCCChhhHHHHHHHHhcCc
Q psy11623 10 KEIGRMIFELFADVVPKTSENFRQFCTGEF 39 (74)
Q Consensus 10 ~~~G~i~ieL~~~~~P~t~~nF~~l~~~~~ 39 (74)
...|++.+|+..+.....+..-+.+|..+.
T Consensus 84 Vk~G~ilfEi~g~~~~~~a~eAlr~a~~Kl 113 (118)
T 2ftc_I 84 VKAGRLVVEMGGRCEFEEVQGFLDQVAHKL 113 (118)
T ss_pred ECCCCEEEEEeccCCHHHHHHHHHHHHhhC
Confidence 356999999999755566666666666543
Done!