Query psy11630
Match_columns 169
No_of_seqs 109 out of 377
Neff 4.0
Searched_HMMs 46136
Date Fri Aug 16 23:34:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11630.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11630hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 99.8 3.2E-19 6.9E-24 162.9 7.0 96 5-127 318-413 (448)
2 KOG2533|consensus 98.9 1.2E-09 2.6E-14 100.7 6.0 122 17-155 342-471 (495)
3 PRK09556 uhpT sugar phosphate 98.6 2.2E-07 4.7E-12 81.5 8.6 70 34-127 347-428 (467)
4 PRK11273 glpT sn-glycerol-3-ph 98.5 8.2E-07 1.8E-11 77.5 8.7 81 22-127 333-414 (452)
5 PRK11663 regulatory protein Uh 98.4 1.5E-06 3.2E-11 75.6 8.7 72 32-128 333-404 (434)
6 TIGR00712 glpT glycerol-3-phos 98.1 1.2E-05 2.5E-10 69.9 7.9 79 25-128 334-413 (438)
7 TIGR00893 2A0114 d-galactonate 98.0 6E-05 1.3E-09 60.6 9.7 96 2-128 54-149 (399)
8 TIGR00881 2A0104 phosphoglycer 98.0 1.8E-05 3.9E-10 64.0 6.3 85 19-128 293-377 (379)
9 PRK11663 regulatory protein Uh 97.9 4.4E-05 9.5E-10 66.4 7.8 97 1-128 82-178 (434)
10 PRK03893 putative sialic acid 97.9 4.4E-05 9.5E-10 66.2 7.7 69 35-128 365-433 (496)
11 TIGR00894 2A0114euk Na(+)-depe 97.9 2.9E-05 6.4E-10 67.4 6.3 64 35-124 360-423 (465)
12 TIGR00792 gph sugar (Glycoside 97.8 0.0001 2.3E-09 62.5 8.0 103 2-127 282-384 (437)
13 PLN00028 nitrate transmembrane 97.8 4.7E-05 1E-09 67.8 6.1 99 2-127 313-412 (476)
14 TIGR00890 2A0111 Oxalate/Forma 97.7 8.8E-05 1.9E-09 60.0 6.6 99 2-129 265-363 (377)
15 PRK15011 sugar efflux transpor 97.7 0.00014 3E-09 62.3 7.6 36 76-128 139-174 (393)
16 TIGR00710 efflux_Bcr_CflA drug 97.7 7.7E-05 1.7E-09 61.4 5.6 95 2-127 65-159 (385)
17 TIGR00880 2_A_01_02 Multidrug 97.7 0.00027 5.8E-09 49.0 7.6 96 2-128 23-118 (141)
18 TIGR00899 2A0120 sugar efflux 97.7 0.00026 5.5E-09 58.3 8.7 99 2-128 58-156 (375)
19 TIGR00891 2A0112 putative sial 97.7 0.00012 2.5E-09 60.4 6.6 73 35-132 327-400 (405)
20 PRK11902 ampG muropeptide tran 97.7 0.00026 5.6E-09 60.6 8.9 96 5-128 65-162 (402)
21 TIGR00881 2A0104 phosphoglycer 97.7 0.0002 4.3E-09 57.9 7.7 97 1-128 54-151 (379)
22 PRK10489 enterobactin exporter 97.7 0.00036 7.9E-09 59.7 9.6 68 35-127 311-378 (417)
23 PRK10213 nepI ribonucleoside t 97.6 0.00016 3.5E-09 62.4 7.2 96 2-128 80-175 (394)
24 PRK12307 putative sialic acid 97.6 0.00013 2.8E-09 61.9 6.2 61 42-127 327-387 (426)
25 PRK05122 major facilitator sup 97.6 0.0002 4.4E-09 60.4 7.3 83 19-128 287-369 (399)
26 TIGR00891 2A0112 putative sial 97.6 0.00019 4.2E-09 59.1 6.9 97 1-128 71-169 (405)
27 PRK10054 putative transporter; 97.6 0.00035 7.6E-09 60.3 8.9 95 1-127 67-161 (395)
28 TIGR00900 2A0121 H+ Antiporter 97.6 0.00021 4.5E-09 57.7 7.0 100 1-128 58-159 (365)
29 PRK11551 putative 3-hydroxyphe 97.6 0.00021 4.5E-09 60.3 7.0 68 35-127 307-374 (406)
30 PRK03699 putative transporter; 97.6 0.00055 1.2E-08 58.4 9.2 68 34-127 292-359 (394)
31 PRK12307 putative sialic acid 97.6 0.0004 8.7E-09 58.9 8.3 97 2-129 78-174 (426)
32 TIGR00895 2A0115 benzoate tran 97.6 0.00025 5.5E-09 57.9 6.8 69 34-127 103-171 (398)
33 PRK10473 multidrug efflux syst 97.5 0.00016 3.4E-09 61.1 5.6 97 1-128 62-158 (392)
34 PRK10642 proline/glycine betai 97.5 0.00029 6.3E-09 62.5 7.3 98 2-127 311-409 (490)
35 PRK11102 bicyclomycin/multidru 97.5 0.00039 8.4E-09 57.8 7.3 96 2-128 51-146 (377)
36 PF07690 MFS_1: Major Facilita 97.5 0.00027 5.8E-09 57.0 6.2 95 2-127 57-151 (352)
37 PRK03545 putative arabinose tr 97.5 0.00046 1E-08 58.5 7.6 96 2-128 69-164 (390)
38 TIGR00897 2A0118 polyol permea 97.4 0.0008 1.7E-08 57.7 8.4 68 34-128 314-381 (402)
39 TIGR00879 SP MFS transporter, 97.4 0.00035 7.7E-09 58.0 5.7 44 60-127 406-449 (481)
40 PRK09874 drug efflux system pr 97.4 0.00066 1.4E-08 56.8 7.3 95 2-128 79-173 (408)
41 PRK09669 putative symporter Ya 97.4 0.00036 7.7E-09 60.8 5.8 79 31-127 314-392 (444)
42 TIGR01299 synapt_SV2 synaptic 97.4 0.00032 6.9E-09 68.0 6.0 92 1-123 619-710 (742)
43 TIGR00898 2A0119 cation transp 97.4 0.00037 8E-09 61.0 5.8 91 2-122 380-470 (505)
44 PRK11551 putative 3-hydroxyphe 97.4 0.00051 1.1E-08 58.0 6.4 96 2-128 75-170 (406)
45 TIGR00711 efflux_EmrB drug res 97.4 0.00036 7.9E-09 59.9 5.6 96 2-128 62-157 (485)
46 PRK14995 methyl viologen resis 97.3 0.0006 1.3E-08 60.8 7.1 97 2-128 66-162 (495)
47 PRK09528 lacY galactoside perm 97.3 0.0016 3.4E-08 56.0 9.3 20 109-128 364-383 (420)
48 TIGR00712 glpT glycerol-3-phos 97.3 0.0014 3.1E-08 57.0 9.2 99 1-128 85-186 (438)
49 TIGR00879 SP MFS transporter, 97.3 0.00038 8.3E-09 57.8 5.4 99 1-127 95-196 (481)
50 PRK11010 ampG muropeptide tran 97.3 0.00092 2E-08 60.2 8.2 98 3-128 76-175 (491)
51 PRK11652 emrD multidrug resist 97.3 0.001 2.2E-08 56.2 8.0 97 1-128 67-163 (394)
52 PRK09705 cynX putative cyanate 97.3 0.0011 2.3E-08 57.1 8.0 35 76-127 325-360 (393)
53 TIGR00893 2A0114 d-galactonate 97.3 0.0012 2.6E-08 53.1 7.8 64 39-127 314-378 (399)
54 PRK10429 melibiose:sodium symp 97.3 0.0007 1.5E-08 60.0 7.1 78 32-127 320-397 (473)
55 TIGR00890 2A0111 Oxalate/Forma 97.3 0.00078 1.7E-08 54.5 6.6 96 1-128 62-157 (377)
56 PRK11043 putative transporter; 97.3 0.0016 3.5E-08 55.1 8.6 96 2-128 66-161 (401)
57 PRK09874 drug efflux system pr 97.3 0.0015 3.2E-08 54.7 8.3 69 35-128 310-378 (408)
58 TIGR00901 2A0125 AmpG-related 97.3 0.00072 1.6E-08 56.2 6.3 94 4-125 53-147 (356)
59 TIGR00899 2A0120 sugar efflux 97.3 0.0011 2.5E-08 54.5 7.2 68 35-128 287-354 (375)
60 PRK10504 putative transporter; 97.2 0.00082 1.8E-08 58.3 6.5 96 2-128 70-165 (471)
61 PRK03893 putative sialic acid 97.2 0.0011 2.3E-08 57.7 7.0 96 2-128 80-175 (496)
62 PRK15403 multidrug efflux syst 97.2 0.0015 3.3E-08 56.9 7.9 96 2-128 76-171 (413)
63 TIGR02718 sider_RhtX_FptX side 97.2 0.003 6.4E-08 53.6 9.3 35 76-127 129-163 (390)
64 PRK09848 glucuronide transport 97.2 0.00091 2E-08 58.2 6.3 91 19-127 302-392 (448)
65 PRK03545 putative arabinose tr 97.2 0.0032 6.9E-08 53.5 9.3 70 34-129 292-361 (390)
66 TIGR02332 HpaX 4-hydroxyphenyl 97.2 0.0011 2.4E-08 57.6 6.5 38 75-129 364-402 (412)
67 TIGR00894 2A0114euk Na(+)-depe 97.1 0.0024 5.2E-08 55.6 8.4 97 2-127 101-198 (465)
68 cd06174 MFS The Major Facilita 97.1 0.0027 5.9E-08 50.5 8.0 95 2-127 59-153 (352)
69 PRK11128 putative 3-phenylprop 97.1 0.0016 3.5E-08 55.3 7.1 69 33-128 91-159 (382)
70 PRK09952 shikimate transporter 97.1 0.0025 5.5E-08 55.8 8.2 61 42-127 349-412 (438)
71 PRK11646 multidrug resistance 97.1 0.0026 5.6E-08 55.1 8.0 95 2-128 71-165 (400)
72 TIGR00892 2A0113 monocarboxyla 97.1 0.002 4.3E-08 57.0 7.2 69 34-127 331-400 (455)
73 PRK11273 glpT sn-glycerol-3-ph 97.0 0.0042 9.2E-08 54.4 9.1 98 1-127 87-187 (452)
74 PRK15075 citrate-proton sympor 97.0 0.0025 5.3E-08 55.4 7.4 45 60-127 354-398 (434)
75 TIGR00903 2A0129 major facilit 97.0 0.0041 8.8E-08 54.1 8.8 69 34-128 77-145 (368)
76 PRK11010 ampG muropeptide tran 97.0 0.0014 3E-08 59.0 5.9 44 60-127 339-382 (491)
77 PRK15402 multidrug efflux syst 97.0 0.0039 8.4E-08 53.1 8.2 96 2-128 73-168 (406)
78 PRK12382 putative transporter; 97.0 0.0041 9E-08 52.5 8.4 96 2-128 274-369 (392)
79 TIGR00903 2A0129 major facilit 97.0 0.0018 4E-08 56.3 6.3 62 36-122 280-341 (368)
80 PRK15011 sugar efflux transpor 97.0 0.0018 4E-08 55.4 6.2 36 77-129 337-372 (393)
81 TIGR00886 2A0108 nitrite extru 97.0 0.0044 9.5E-08 51.0 8.1 91 1-122 61-151 (366)
82 TIGR00889 2A0110 nucleoside tr 97.0 0.0021 4.6E-08 56.3 6.6 62 41-127 313-381 (418)
83 COG2211 MelB Na+/melibiose sym 97.0 0.0016 3.5E-08 60.7 6.1 94 16-127 307-400 (467)
84 TIGR00883 2A0106 metabolite-pr 96.9 0.0023 4.9E-08 52.1 5.9 70 34-128 310-381 (394)
85 TIGR02332 HpaX 4-hydroxyphenyl 96.9 0.0028 6.2E-08 55.1 6.9 96 2-128 68-169 (412)
86 COG2807 CynX Cyanate permease 96.9 0.0035 7.6E-08 57.7 7.7 97 3-129 269-366 (395)
87 PRK10077 xylE D-xylose transpo 96.9 0.0039 8.5E-08 53.8 7.5 44 60-127 387-436 (479)
88 PRK09952 shikimate transporter 96.9 0.0046 1E-07 54.2 7.9 96 2-128 89-200 (438)
89 TIGR00887 2A0109 phosphate:H+ 96.8 0.0032 6.8E-08 56.1 6.7 51 48-123 404-454 (502)
90 PRK10091 MFS transport protein 96.8 0.0038 8.2E-08 53.1 6.8 97 1-128 62-158 (382)
91 PRK10489 enterobactin exporter 96.8 0.0049 1.1E-07 52.8 7.5 99 1-127 76-176 (417)
92 TIGR00902 2A0127 phenyl propri 96.8 0.0042 9E-08 53.0 6.9 69 33-128 91-159 (382)
93 PRK15075 citrate-proton sympor 96.8 0.0047 1E-07 53.7 7.2 98 1-129 80-193 (434)
94 TIGR00792 gph sugar (Glycoside 96.8 0.0073 1.6E-07 51.4 8.3 35 77-128 133-174 (437)
95 PRK12382 putative transporter; 96.8 0.0037 8.1E-08 52.8 6.4 23 109-131 160-182 (392)
96 PRK09584 tppB putative tripept 96.8 0.0034 7.4E-08 56.9 6.4 32 80-128 150-181 (500)
97 KOG0255|consensus 96.7 0.0037 8E-08 55.6 6.4 92 2-127 143-234 (521)
98 TIGR00883 2A0106 metabolite-pr 96.7 0.0056 1.2E-07 49.8 6.9 99 1-128 59-171 (394)
99 PF13347 MFS_2: MFS/sugar tran 96.7 0.0033 7.1E-08 54.6 5.9 104 2-127 285-388 (428)
100 cd06174 MFS The Major Facilita 96.7 0.0057 1.2E-07 48.6 6.8 69 35-128 264-332 (352)
101 PRK10504 putative transporter; 96.7 0.0056 1.2E-07 53.1 7.3 35 76-127 385-419 (471)
102 PRK05122 major facilitator sup 96.7 0.012 2.6E-07 49.7 8.7 35 77-128 145-179 (399)
103 PLN00028 nitrate transmembrane 96.7 0.0082 1.8E-07 53.5 8.0 94 2-127 96-198 (476)
104 TIGR01299 synapt_SV2 synaptic 96.6 0.0033 7.2E-08 61.1 5.7 93 2-125 227-319 (742)
105 TIGR00896 CynX cyanate transpo 96.6 0.0053 1.2E-07 51.1 6.2 59 43-125 292-350 (355)
106 TIGR00892 2A0113 monocarboxyla 96.6 0.011 2.3E-07 52.4 8.4 34 78-128 141-174 (455)
107 TIGR00898 2A0119 cation transp 96.6 0.0073 1.6E-07 52.9 7.0 93 1-127 151-243 (505)
108 TIGR00900 2A0121 H+ Antiporter 96.6 0.0046 1E-07 49.9 5.3 65 36-125 301-365 (365)
109 PRK11462 putative transporter; 96.6 0.0066 1.4E-07 54.3 6.8 81 29-127 311-391 (460)
110 PRK10406 alpha-ketoglutarate t 96.5 0.011 2.4E-07 51.4 7.7 59 45-127 344-402 (432)
111 PRK09528 lacY galactoside perm 96.5 0.0038 8.3E-08 53.6 4.8 33 77-127 138-170 (420)
112 PRK08633 2-acyl-glycerophospho 96.5 0.0059 1.3E-07 58.7 6.3 95 1-123 71-165 (1146)
113 PRK10642 proline/glycine betai 96.5 0.0096 2.1E-07 53.0 7.2 97 1-128 81-193 (490)
114 PRK06814 acylglycerophosphoeth 96.4 0.0058 1.3E-07 59.5 5.7 98 2-129 77-176 (1140)
115 PRK03699 putative transporter; 96.4 0.0062 1.3E-07 52.0 5.2 96 2-128 67-163 (394)
116 TIGR00887 2A0109 phosphate:H+ 96.3 0.0078 1.7E-07 53.6 5.8 90 2-120 81-174 (502)
117 TIGR00895 2A0115 benzoate tran 96.3 0.0082 1.8E-07 49.1 5.1 61 35-120 337-397 (398)
118 PRK03633 putative MFS family t 96.2 0.014 2.9E-07 49.6 6.5 35 77-128 318-352 (381)
119 PRK10406 alpha-ketoglutarate t 96.2 0.012 2.6E-07 51.1 6.2 61 2-67 88-154 (432)
120 PRK11043 putative transporter; 96.2 0.015 3.3E-07 49.2 6.7 64 34-123 294-357 (401)
121 TIGR00924 yjdL_sub1_fam amino 96.1 0.01 2.2E-07 53.3 5.5 99 2-128 73-172 (475)
122 TIGR01272 gluP glucose/galacto 96.1 0.021 4.5E-07 48.6 7.0 61 41-128 235-295 (310)
123 PRK15034 nitrate/nitrite trans 96.1 0.018 3.9E-07 53.2 7.1 61 68-145 390-453 (462)
124 TIGR00896 CynX cyanate transpo 96.0 0.021 4.5E-07 47.6 6.3 94 2-128 60-155 (355)
125 PRK03633 putative MFS family t 95.9 0.015 3.2E-07 49.4 5.2 95 2-127 66-160 (381)
126 KOG2533|consensus 95.9 0.012 2.7E-07 54.8 5.1 56 38-125 282-337 (495)
127 TIGR00882 2A0105 oligosacchari 95.9 0.02 4.2E-07 48.8 5.9 29 81-127 134-162 (396)
128 PRK10133 L-fucose transporter; 95.9 0.03 6.4E-07 49.7 7.2 82 40-148 351-435 (438)
129 PRK15034 nitrate/nitrite trans 95.9 0.057 1.2E-06 50.0 9.2 91 2-121 95-187 (462)
130 TIGR00882 2A0105 oligosacchari 95.8 0.035 7.6E-07 47.2 7.2 20 109-128 356-375 (396)
131 TIGR00788 fbt folate/biopterin 95.8 0.046 9.9E-07 49.2 8.1 71 36-129 120-190 (468)
132 PRK10091 MFS transport protein 95.8 0.074 1.6E-06 45.3 8.9 19 109-127 336-355 (382)
133 PRK09556 uhpT sugar phosphate 95.7 0.07 1.5E-06 47.0 8.9 70 34-128 120-192 (467)
134 PF05977 MFS_3: Transmembrane 95.7 0.074 1.6E-06 49.6 9.3 70 33-127 304-373 (524)
135 TIGR00897 2A0118 polyol permea 95.7 0.032 6.9E-07 47.9 6.5 68 35-127 104-172 (402)
136 PRK10054 putative transporter; 95.6 0.067 1.4E-06 46.3 8.3 19 109-127 345-363 (395)
137 PRK09705 cynX putative cyanate 95.5 0.047 1E-06 47.0 6.8 95 2-128 69-164 (393)
138 TIGR02718 sider_RhtX_FptX side 95.5 0.05 1.1E-06 46.2 6.8 36 76-128 336-371 (390)
139 PRK11195 lysophospholipid tran 95.4 0.029 6.4E-07 48.5 5.4 92 1-127 62-153 (393)
140 TIGR00806 rfc RFC reduced fola 95.3 0.053 1.2E-06 51.5 7.0 93 2-127 87-179 (511)
141 PRK15462 dipeptide/tripeptide 95.2 0.038 8.2E-07 51.4 5.7 34 78-128 136-169 (493)
142 PF11700 ATG22: Vacuole efflux 95.2 0.14 3E-06 47.2 9.2 87 33-144 377-466 (477)
143 PRK10473 multidrug efflux syst 95.2 0.068 1.5E-06 45.2 6.6 20 109-128 335-354 (392)
144 PRK11902 ampG muropeptide tran 95.1 0.07 1.5E-06 45.7 6.6 20 109-128 351-370 (402)
145 TIGR00885 fucP L-fucose:H+ sym 95.1 0.036 7.8E-07 48.7 4.9 91 2-121 63-154 (410)
146 PRK10077 xylE D-xylose transpo 95.1 0.06 1.3E-06 46.5 6.1 62 41-127 125-194 (479)
147 PRK10207 dipeptide/tripeptide 95.0 0.062 1.3E-06 48.9 6.3 21 108-128 154-174 (489)
148 PRK15402 multidrug efflux syst 95.0 0.078 1.7E-06 45.1 6.5 35 76-127 340-374 (406)
149 PRK11646 multidrug resistance 95.0 0.081 1.8E-06 45.9 6.7 54 44-124 307-360 (400)
150 PRK11462 putative transporter; 95.0 0.14 3.1E-06 45.8 8.4 91 2-122 74-171 (460)
151 PRK11652 emrD multidrug resist 94.9 0.056 1.2E-06 45.7 5.4 35 76-127 330-364 (394)
152 PRK10133 L-fucose transporter; 94.8 0.11 2.5E-06 46.0 7.2 90 2-120 86-176 (438)
153 KOG2504|consensus 94.7 0.14 3E-06 47.7 8.0 71 32-127 384-455 (509)
154 TIGR00711 efflux_EmrB drug res 94.6 0.044 9.6E-07 47.1 4.2 69 33-126 345-413 (485)
155 COG2814 AraJ Arabinose efflux 94.3 0.14 3E-06 47.0 6.9 70 34-128 99-168 (394)
156 TIGR00889 2A0110 nucleoside tr 94.3 0.19 4.2E-06 44.1 7.6 19 109-127 142-160 (418)
157 TIGR00710 efflux_Bcr_CflA drug 94.3 0.15 3.2E-06 42.0 6.4 35 77-128 332-366 (385)
158 PF03092 BT1: BT1 family; Int 94.2 0.27 5.9E-06 44.2 8.3 99 23-144 71-177 (433)
159 PRK11195 lysophospholipid tran 94.2 0.24 5.2E-06 42.9 7.7 69 34-127 291-359 (393)
160 PRK10429 melibiose:sodium symp 94.1 0.49 1.1E-05 42.1 9.7 9 2-10 71-79 (473)
161 PRK09669 putative symporter Ya 93.9 0.37 8E-06 42.1 8.4 35 47-91 123-157 (444)
162 TIGR01301 GPH_sucrose GPH fami 93.7 0.28 6.1E-06 45.5 7.7 24 3-29 69-92 (477)
163 COG2271 UhpC Sugar phosphate p 93.5 0.45 9.7E-06 44.8 8.7 82 16-127 99-185 (448)
164 PRK14995 methyl viologen resis 93.4 0.16 3.4E-06 45.4 5.3 93 2-123 320-413 (495)
165 KOG0569|consensus 93.2 0.31 6.8E-06 45.8 7.2 83 40-149 373-457 (485)
166 COG2814 AraJ Arabinose efflux 92.8 0.67 1.5E-05 42.6 8.6 97 3-127 269-365 (394)
167 PRK06814 acylglycerophosphoeth 92.8 0.54 1.2E-05 46.1 8.4 65 34-123 332-396 (1140)
168 PF07690 MFS_1: Major Facilita 92.4 0.049 1.1E-06 43.9 0.7 49 35-91 298-346 (352)
169 PF00083 Sugar_tr: Sugar (and 92.4 0.0056 1.2E-07 52.6 -5.1 79 1-91 70-149 (451)
170 KOG2615|consensus 92.3 0.29 6.3E-06 46.0 5.6 88 2-122 93-181 (451)
171 PRK08633 2-acyl-glycerophospho 92.1 0.67 1.5E-05 44.9 8.1 67 35-127 321-387 (1146)
172 PF13347 MFS_2: MFS/sugar tran 92.0 0.42 9.2E-06 41.5 6.0 26 2-30 66-91 (428)
173 TIGR00902 2A0127 phenyl propri 91.9 0.55 1.2E-05 40.1 6.6 19 109-127 341-359 (382)
174 COG2223 NarK Nitrate/nitrite t 91.9 0.52 1.1E-05 43.9 6.7 33 76-125 345-377 (417)
175 PRK11128 putative 3-phenylprop 91.9 0.51 1.1E-05 40.2 6.3 19 109-127 341-359 (382)
176 PRK10213 nepI ribonucleoside t 91.3 1.2 2.6E-05 38.6 8.1 21 108-128 351-371 (394)
177 TIGR00885 fucP L-fucose:H+ sym 91.0 0.78 1.7E-05 40.4 6.7 58 40-124 325-382 (410)
178 PTZ00207 hypothetical protein; 90.5 0.26 5.6E-06 47.1 3.5 94 2-127 86-184 (591)
179 TIGR00805 oat sodium-independe 90.2 0.86 1.9E-05 43.2 6.7 59 41-124 177-235 (633)
180 COG0738 FucP Fucose permease [ 89.7 2.4 5.2E-05 39.8 8.9 64 37-127 325-388 (422)
181 COG2270 Permeases of the major 89.6 1.5 3.3E-05 41.1 7.7 95 2-127 313-407 (438)
182 COG2223 NarK Nitrate/nitrite t 89.2 1.1 2.4E-05 41.8 6.5 96 2-127 74-172 (417)
183 COG2211 MelB Na+/melibiose sym 88.0 1.5 3.3E-05 41.2 6.5 47 35-91 111-160 (467)
184 PF07672 MFS_Mycoplasma: Mycop 87.5 1.2 2.5E-05 39.4 5.2 50 36-91 204-253 (267)
185 KOG0253|consensus 87.5 0.35 7.5E-06 45.9 2.0 89 2-122 406-494 (528)
186 KOG2504|consensus 87.1 2.1 4.5E-05 40.0 6.9 35 76-127 166-200 (509)
187 PF05977 MFS_3: Transmembrane 85.0 2.9 6.2E-05 39.2 6.7 65 2-70 70-136 (524)
188 PF00083 Sugar_tr: Sugar (and 84.5 0.1 2.2E-06 44.8 -2.8 43 61-127 373-416 (451)
189 PRK15403 multidrug efflux syst 84.3 12 0.00025 32.8 9.8 57 78-152 345-406 (413)
190 PRK11102 bicyclomycin/multidru 83.3 3.3 7.3E-05 34.4 5.8 16 76-91 318-333 (377)
191 PF11700 ATG22: Vacuole efflux 83.1 10 0.00022 35.1 9.3 86 2-91 95-199 (477)
192 KOG2532|consensus 80.1 4.3 9.3E-05 37.6 5.8 19 109-127 176-195 (466)
193 TIGR00924 yjdL_sub1_fam amino 79.3 13 0.00029 33.5 8.6 67 34-127 379-447 (475)
194 TIGR00886 2A0108 nitrite extru 77.8 2.2 4.7E-05 35.1 2.9 32 96-127 36-67 (366)
195 KOG3764|consensus 77.4 8 0.00017 36.8 6.7 109 2-142 131-243 (464)
196 PF03825 Nuc_H_symport: Nucleo 77.3 30 0.00065 31.1 10.2 67 15-91 70-136 (400)
197 KOG0252|consensus 77.1 3 6.4E-05 40.2 3.9 49 49-122 419-467 (538)
198 KOG0253|consensus 76.7 2.7 5.9E-05 40.1 3.5 103 37-166 167-269 (528)
199 KOG0254|consensus 76.4 4 8.6E-05 36.9 4.4 59 2-67 114-172 (513)
200 KOG2816|consensus 76.1 6 0.00013 36.8 5.6 19 109-127 160-178 (463)
201 COG2270 Permeases of the major 75.6 20 0.00043 33.9 8.8 79 2-91 83-162 (438)
202 TIGR01272 gluP glucose/galacto 73.0 11 0.00023 32.2 5.9 61 36-121 10-70 (310)
203 PF03825 Nuc_H_symport: Nucleo 69.0 13 0.00027 33.5 5.8 19 109-127 350-368 (400)
204 TIGR00788 fbt folate/biopterin 67.9 8.8 0.00019 34.7 4.5 43 59-125 373-415 (468)
205 KOG0252|consensus 67.7 6.9 0.00015 37.8 4.0 63 2-68 109-175 (538)
206 COG2807 CynX Cyanate permease 64.7 19 0.00042 33.6 6.1 96 3-127 69-165 (395)
207 TIGR00805 oat sodium-independe 63.9 7.8 0.00017 36.8 3.6 36 92-127 63-98 (633)
208 PF12832 MFS_1_like: MFS_1 lik 63.0 12 0.00025 26.4 3.5 24 109-132 47-70 (77)
209 COG0738 FucP Fucose permease [ 61.3 48 0.001 31.3 8.1 85 11-122 78-165 (422)
210 PRK09848 glucuronide transport 60.3 61 0.0013 28.3 8.2 8 50-57 126-133 (448)
211 KOG0255|consensus 59.5 59 0.0013 29.1 8.2 92 2-122 375-467 (521)
212 KOG1330|consensus 58.0 8.9 0.00019 36.7 2.8 65 59-147 143-215 (493)
213 PF03209 PUCC: PUCC protein; 55.6 88 0.0019 29.3 8.8 62 39-125 92-153 (403)
214 PRK09109 motC flagellar motor 53.3 14 0.00029 31.7 3.0 61 78-155 159-219 (246)
215 COG5336 Uncharacterized protei 53.2 18 0.0004 28.6 3.4 16 109-124 54-69 (116)
216 TIGR00880 2_A_01_02 Multidrug 53.2 18 0.00038 24.6 3.0 23 105-127 6-28 (141)
217 KOG2532|consensus 53.2 14 0.0003 34.3 3.2 36 76-128 389-427 (466)
218 PF06609 TRI12: Fungal trichot 53.0 30 0.00066 33.6 5.5 55 29-91 398-452 (599)
219 PF06813 Nodulin-like: Nodulin 52.0 8.2 0.00018 33.1 1.4 35 92-127 32-66 (250)
220 PRK15432 autoinducer 2 ABC tra 51.6 16 0.00035 32.7 3.2 46 82-143 253-305 (344)
221 KOG2563|consensus 51.5 24 0.00052 33.8 4.5 82 40-146 363-454 (480)
222 PF00854 PTR2: POT family; In 51.3 64 0.0014 27.8 6.8 19 109-127 84-102 (372)
223 PRK11618 inner membrane ABC tr 51.0 89 0.0019 27.1 7.7 57 76-148 244-314 (317)
224 PF06609 TRI12: Fungal trichot 50.9 69 0.0015 31.2 7.6 59 2-68 103-161 (599)
225 TIGR01301 GPH_sucrose GPH fami 50.9 80 0.0017 29.5 7.8 64 37-127 381-448 (477)
226 COG0477 ProP Permeases of the 49.2 1.1E+02 0.0023 22.7 8.9 69 36-128 94-165 (338)
227 PF01618 MotA_ExbB: MotA/TolQ/ 48.7 19 0.00042 27.6 2.9 40 77-125 70-109 (139)
228 KOG0637|consensus 48.6 54 0.0012 31.7 6.3 84 2-91 96-193 (498)
229 PRK08456 flagellar motor prote 48.3 18 0.00039 31.1 3.0 62 77-155 158-219 (257)
230 PF06963 FPN1: Ferroportin1 (F 47.2 1.2E+02 0.0025 28.3 8.2 36 72-127 141-179 (432)
231 COG1230 CzcD Co/Zn/Cd efflux s 46.1 1.1E+02 0.0023 27.5 7.5 51 112-162 170-221 (296)
232 PRK08124 flagellar motor prote 43.7 23 0.00049 30.7 2.9 61 78-155 160-220 (263)
233 KOG3762|consensus 43.7 68 0.0015 31.8 6.3 33 112-144 511-549 (618)
234 PRK10207 dipeptide/tripeptide 40.9 1.4E+02 0.003 27.3 7.6 49 45-120 390-438 (489)
235 PRK03612 spermidine synthase; 39.9 1.9E+02 0.004 27.3 8.5 62 40-127 114-176 (521)
236 TIGR03727 urea_t_UrtC_arc urea 39.2 1.1E+02 0.0024 27.5 6.7 31 77-123 274-304 (364)
237 COG3238 Uncharacterized protei 39.0 46 0.00099 27.1 3.8 17 111-127 103-119 (150)
238 COG0559 LivH Branched-chain am 38.8 34 0.00074 30.4 3.3 28 79-122 231-258 (297)
239 PF06800 Sugar_transport: Suga 37.6 51 0.0011 29.1 4.1 72 12-91 137-210 (269)
240 TIGR00901 2A0125 AmpG-related 37.5 57 0.0012 27.1 4.2 43 36-86 309-351 (356)
241 PRK09584 tppB putative tripept 37.5 1.2E+02 0.0026 27.7 6.6 23 2-24 341-363 (500)
242 TIGR00926 2A1704 Peptide:H+ sy 37.3 1.2E+02 0.0027 29.5 7.0 17 108-124 135-151 (654)
243 PF03605 DcuA_DcuB: Anaerobic 36.5 1.7E+02 0.0038 27.1 7.5 99 43-162 98-206 (364)
244 TIGR03409 urea_trans_UrtB urea 35.5 49 0.0011 28.3 3.6 31 77-123 226-256 (291)
245 PF01940 DUF92: Integral membr 35.2 39 0.00085 29.0 3.0 40 106-145 18-60 (226)
246 PRK06743 flagellar motor prote 34.1 43 0.00094 29.2 3.1 61 78-155 156-216 (254)
247 PF01788 PsbJ: PsbJ; InterPro 33.7 26 0.00055 23.1 1.2 18 40-57 19-36 (40)
248 TIGR00297 conserved hypothetic 33.1 45 0.00098 29.0 3.1 46 106-151 24-72 (237)
249 PRK15462 dipeptide/tripeptide 32.9 29 0.00064 32.5 2.0 19 109-127 57-76 (493)
250 PF01306 LacY_symp: LacY proto 32.7 19 0.0004 33.4 0.7 14 109-122 150-163 (412)
251 KOG0254|consensus 32.3 44 0.00096 30.2 3.0 20 108-127 100-119 (513)
252 PF01306 LacY_symp: LacY proto 31.2 39 0.00084 31.3 2.5 34 77-127 40-73 (412)
253 KOG0569|consensus 31.1 1.5E+02 0.0031 28.3 6.3 48 40-91 115-166 (485)
254 PRK11285 araH L-arabinose tran 30.8 40 0.00086 29.8 2.4 48 83-146 273-327 (333)
255 TIGR03622 urea_t_UrtB_arc urea 30.5 43 0.00093 28.5 2.5 33 75-123 214-246 (283)
256 PRK10697 DNA-binding transcrip 29.7 18 0.00039 28.4 0.0 7 121-127 26-32 (118)
257 PF07857 DUF1632: CEO family ( 29.0 76 0.0016 27.7 3.8 14 114-127 92-105 (254)
258 PF01034 Syndecan: Syndecan do 28.8 17 0.00037 26.0 -0.2 35 129-165 22-56 (64)
259 KOG4686|consensus 28.5 96 0.0021 29.2 4.5 52 75-143 383-440 (459)
260 PRK08990 flagellar motor prote 28.3 56 0.0012 28.3 2.9 61 78-155 156-216 (254)
261 PF04657 DUF606: Protein of un 27.6 37 0.00081 26.5 1.5 17 111-127 98-114 (138)
262 PTZ00370 STEVOR; Provisional 27.0 49 0.0011 29.9 2.3 41 113-154 247-287 (296)
263 PF11368 DUF3169: Protein of u 26.7 55 0.0012 27.6 2.5 7 109-115 18-24 (248)
264 PF03092 BT1: BT1 family; Int 26.4 1.4E+02 0.0031 26.9 5.2 59 60-142 341-409 (433)
265 COG1172 AraH Ribose/xylose/ara 26.2 50 0.0011 29.5 2.2 39 109-147 266-311 (316)
266 PF06738 DUF1212: Protein of u 26.1 3.3E+02 0.0071 21.5 7.8 43 14-57 103-145 (193)
267 KOG3764|consensus 25.3 1.2E+02 0.0026 29.1 4.6 34 77-127 400-433 (464)
268 PRK06926 flagellar motor prote 25.0 73 0.0016 28.0 3.0 60 78-155 164-224 (271)
269 PF06813 Nodulin-like: Nodulin 24.7 4.5E+02 0.0097 22.5 8.0 29 78-122 129-157 (250)
270 TIGR00910 2A0307_GadC glutamat 24.1 2.3E+02 0.005 26.2 6.2 14 45-58 366-379 (507)
271 PRK09110 flagellar motor prote 23.9 79 0.0017 27.9 3.0 61 78-155 178-239 (283)
272 PRK12482 flagellar motor prote 22.7 86 0.0019 27.9 3.0 61 78-155 178-239 (287)
273 PRK12489 anaerobic C4-dicarbox 22.6 6E+02 0.013 24.0 8.6 15 77-91 132-146 (443)
274 TIGR02978 phageshock_pspC phag 21.9 89 0.0019 24.4 2.6 17 110-127 11-27 (121)
275 PLN02776 prenyltransferase 21.8 6.1E+02 0.013 23.1 9.1 46 109-155 130-181 (341)
276 PF01102 Glycophorin_A: Glycop 21.7 1.2E+02 0.0025 24.0 3.2 36 97-144 56-91 (122)
277 PRK10263 DNA translocase FtsK; 21.4 1.9E+02 0.0042 31.3 5.6 22 106-127 140-161 (1355)
278 PF04799 Fzo_mitofusin: fzo-li 21.3 32 0.00068 28.8 0.0 49 114-162 34-89 (171)
279 COG3619 Predicted membrane pro 20.3 98 0.0021 26.7 2.8 16 107-122 182-197 (226)
280 COG4459 NapE Periplasmic nitra 20.1 1.6E+02 0.0035 21.0 3.3 39 8-55 14-52 (62)
281 COG3333 Uncharacterized protei 20.1 1.4E+02 0.003 29.0 3.9 24 104-127 410-433 (504)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.77 E-value=3.2e-19 Score=162.94 Aligned_cols=96 Identities=29% Similarity=0.424 Sum_probs=90.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhh
Q psy11630 5 GLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSI 84 (169)
Q Consensus 5 g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgi 84 (169)
|||.|+ +++++++.+.++..||+.+.+++.+..++++.+|||+||||+|+ +.+++|+++ |||+||++|+
T Consensus 318 grR~p~---~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLi-Gl~a~e~~p-------K~AaGtA~Gf 386 (448)
T COG2271 318 GRRGPM---ALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLI-GLAAAEFVP-------KKAAGTATGF 386 (448)
T ss_pred cccchH---HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHH-HHHHhcccc-------Hhhccchhch
Confidence 899999 99999999999999999988899999999999999999999888 589999998 4799999999
Q ss_pred hcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 85 IDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 85 Idg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
++.++|+ +|+++++++.|+++|.+||.
T Consensus 387 ~Glf~Yl----------------~Ga~~a~~~~g~i~d~~gW~ 413 (448)
T COG2271 387 VGLFAYL----------------IGAALAGLPLGYIADTWGWD 413 (448)
T ss_pred hhhHHHH----------------hhHHhcCCcceeeEecCCCc
Confidence 9999998 37888999999999999999
No 2
>KOG2533|consensus
Probab=98.94 E-value=1.2e-09 Score=100.74 Aligned_cols=122 Identities=37% Similarity=0.485 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCc
Q psy11630 17 RVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSN 96 (169)
Q Consensus 17 ~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~ 96 (169)
+..+..+.+.+|...+...+..........|++++||+.+..+++.++++.++..++|.|++.|++.+++++|+.
T Consensus 342 ~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~----- 416 (495)
T KOG2533|consen 342 RRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSA----- 416 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHH-----
Confidence 344455555555554444444445566789999999999999999999999999999999999999999999999
Q ss_pred cccCCcchhhccchhhhhhHHHHhhhccCCcH--------HHHHHHHHhHHhhhhhcccchhhhhhh
Q psy11630 97 TLSGDLATVFDIGGIFGGIAAGLISDMTGKSA--------SVCATMLVLSIPMKQKGNQEAEQDYKE 155 (169)
Q Consensus 97 ~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a--------~~c~~mlll~~~~~e~~~~~~~~~~~~ 155 (169)
|.+.+|+..+..+.+|+|.. .+|...++....+++.+++++++..++
T Consensus 417 ------------~~~~~~~~~~~~ap~y~~~~~f~~~~~~~~~~~~~~v~~~~~~~~n~k~~~~~~~ 471 (495)
T KOG2533|consen 417 ------------GAISGQLFRSLDAPRYGWGAVFYMLVAACVGIVLLLVILFYKERENKKRDKLLEE 471 (495)
T ss_pred ------------HHhhhhhcccccCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 99999999999999999983 344456666666777666666555544
No 3
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.59 E-value=2.2e-07 Score=81.48 Aligned_cols=70 Identities=31% Similarity=0.435 Sum_probs=56.2
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.+.....+.+++.|++.++|..... +...|..+ ++..|++.|+++..|++ .|++++
T Consensus 347 ~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~p-------~~~~g~a~gi~~~~g~l----------------~g~~~~ 402 (467)
T PRK09556 347 TSEYMYLASLFALGFLVFGPQLLIG-VAAVGFVP-------KKAIGVANGIKGTFAYL----------------FGDSFA 402 (467)
T ss_pred CcHHHHHHHHHHHHHHHhhHHHHHH-HHHHhhcc-------hhhHHHHHHHHHHHHHH----------------HhHHHH
Confidence 4455555667789999999998764 45568776 46999999999999996 156899
Q ss_pred hhHHHHhhh------------ccCCc
Q psy11630 114 GIAAGLISD------------MTGKS 127 (169)
Q Consensus 114 giliG~Isd------------~~GW~ 127 (169)
++++|++.| ..||+
T Consensus 403 ~~~~G~i~~~~~~g~~~~~~~~~~~~ 428 (467)
T PRK09556 403 KVGLGMIADPTKNGTPIFGYTLTGWA 428 (467)
T ss_pred hhhHHHHhcccccccccccccccChH
Confidence 999999999 67888
No 4
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.45 E-value=8.2e-07 Score=77.53 Aligned_cols=81 Identities=27% Similarity=0.381 Sum_probs=58.8
Q ss_pred HHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCC
Q psy11630 22 TTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGD 101 (169)
Q Consensus 22 ~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~ 101 (169)
...++.++.....+.+...+.++.+|+++.+|..... +.+.|..+ ++..|++.|+.+.++.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~p-------~~~~g~~~g~~~~~~~~---------- 394 (452)
T PRK11273 333 TIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIG-LHALELAP-------KKAAGTAAGFTGLFGYL---------- 394 (452)
T ss_pred HHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHH-HHHHHHcC-------hhhhhhHHHHHHHHHHH----------
Confidence 3344444443334444445567788998888887664 45567765 35889999999999998
Q ss_pred cchhhccchhh-hhhHHHHhhhccCCc
Q psy11630 102 LATVFDIGGIF-GGIAAGLISDMTGKS 127 (169)
Q Consensus 102 LS~~~DvGaai-ggiliG~Isd~~GW~ 127 (169)
|+++ ++.+.|++.|++||+
T Consensus 395 -------g~~~~g~~v~g~l~~~~g~~ 414 (452)
T PRK11273 395 -------GGSVAASAIVGYTVDFFGWD 414 (452)
T ss_pred -------HHHHhhhhhHHHHHHHhcch
Confidence 8765 789999999999998
No 5
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.39 E-value=1.5e-06 Score=75.58 Aligned_cols=72 Identities=19% Similarity=0.252 Sum_probs=56.2
Q ss_pred cCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchh
Q psy11630 32 GATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGI 111 (169)
Q Consensus 32 ~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaa 111 (169)
+..+......+++.+|++..+|..+.. ....|..+ ++..+++.|+++..+++ |++
T Consensus 333 ~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~-------~~~~g~~~g~~~~~~~~-----------------g~~ 387 (434)
T PRK11663 333 PFASYVMQAACFFTIGFFVFGPQMLIG-MAAAECSH-------KEAAGAATGFVGLFAYL-----------------GAA 387 (434)
T ss_pred ccccHHHHHHHHHHHHHHHhhHHHHHH-HHHHhccc-------HhhHHhHHHHHHHHHHH-----------------HHH
Confidence 333444444556678998899987764 34566644 45789999999999999 999
Q ss_pred hhhhHHHHhhhccCCcH
Q psy11630 112 FGGIAAGLISDMTGKSA 128 (169)
Q Consensus 112 iggiliG~Isd~~GW~a 128 (169)
+++++.|++.|.+||++
T Consensus 388 ~~p~~~g~l~~~~g~~~ 404 (434)
T PRK11663 388 LSGYPLAKVLEIWHWTG 404 (434)
T ss_pred HhcccHHHHHHhcccHH
Confidence 99999999999999994
No 6
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.10 E-value=1.2e-05 Score=69.94 Aligned_cols=79 Identities=24% Similarity=0.400 Sum_probs=56.8
Q ss_pred HHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcch
Q psy11630 25 LFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLAT 104 (169)
Q Consensus 25 l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~ 104 (169)
++.++..+..+.+...+.++..|+.+++|..... +...|..+ ++..+++.|+.+..+++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~-------~~~~g~~~g~~~~~~~~------------- 392 (438)
T TIGR00712 334 VIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIG-LHALELAP-------KKAAGTAAGFTGLFGYL------------- 392 (438)
T ss_pred HHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHH-HHHHHhcC-------hhheeeehhhhchHHHh-------------
Confidence 3334433333444455567788998899987664 34556654 35789999999999988
Q ss_pred hhccch-hhhhhHHHHhhhccCCcH
Q psy11630 105 VFDIGG-IFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 105 ~~DvGa-aiggiliG~Isd~~GW~a 128 (169)
|+ ++++++.|++.|++||++
T Consensus 393 ----gg~~~gp~l~G~l~~~~g~~~ 413 (438)
T TIGR00712 393 ----GGSVAASAIVGYTVDFFGWDG 413 (438)
T ss_pred ----hhhhhcchhHHHHHHhccchH
Confidence 75 579999999999999983
No 7
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.00 E-value=6e-05 Score=60.60 Aligned_cols=96 Identities=19% Similarity=0.153 Sum_probs=64.4
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... .+...+.....+.+.+. .+++...+..++.|+.... ......+...|..++ +-.+.+
T Consensus 54 d~~g~r~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~-------~~r~~~ 119 (399)
T TIGR00893 54 DRFGARKTL----AVFIVIWGVFTGLQAFA--GAYVSLYILRVLLGAAEAP-FFPGIILIVASWFPA-------SERATA 119 (399)
T ss_pred HhcCcceee----HHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHh-hhhHHHHHHHHhCCH-------HHHHHH
Confidence 788988766 33333333333333332 3666666667777877543 333334456666553 456788
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+......+ |.++++.+.+++.+.+||+.
T Consensus 120 ~~~~~~~~~~-----------------g~~~~~~~~~~l~~~~~~~~ 149 (399)
T TIGR00893 120 VSIFNSAQGL-----------------GGIIGGPLVGWILIHFSWQW 149 (399)
T ss_pred HHHHHHhchH-----------------HHHHHHHHHHHHHHhCCchH
Confidence 8999999999 99999999999999999993
No 8
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.97 E-value=1.8e-05 Score=64.02 Aligned_cols=85 Identities=31% Similarity=0.471 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccc
Q psy11630 19 NHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTL 98 (169)
Q Consensus 19 ~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~ 98 (169)
......+..++..+..+.....++++..|++.++|..+.. +...|..+ ++..+++.|+.+..+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~-------~~~~g~~~g~~~~~~~~------- 357 (379)
T TIGR00881 293 ALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIG-VIASELAP-------KKAAGTAAGFVGFFAYL------- 357 (379)
T ss_pred HHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHH-HHHHHhcC-------cchhHHHHHHHHHhhhh-------
Confidence 3344444444443344455566667788999999988764 45667765 35789999999999999
Q ss_pred cCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 99 SGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 99 a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
|+++++.+.|++.|.+||+.
T Consensus 358 ----------g~~~~~~~~g~l~~~~g~~~ 377 (379)
T TIGR00881 358 ----------GGILAGLPLGYLADGFGWAG 377 (379)
T ss_pred ----------hhhhhhhhHHHHHHhhcccc
Confidence 99999999999999999974
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.90 E-value=4.4e-05 Score=66.43 Aligned_cols=97 Identities=11% Similarity=0.024 Sum_probs=62.1
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|+|... .+.+.......+.+.+ ..+++..++..++.|++...-+... .+...|.-+ ++-.++
T Consensus 82 ~dr~g~r~~~----~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~~~g~~~~~~-~~~~~~~~~-------~~~rg~ 147 (434)
T PRK11663 82 SDRSNARYFM----GIGLIATGIINILFGF--SSSLWAFALLWVLNAFFQGWGWPVC-AKLLTAWYS-------RTERGG 147 (434)
T ss_pred HhhcCCchhH----HHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHccchHH-HHHHHHhCC-------HHHHHH
Confidence 3788888655 3334443334444333 2455555555556676664333222 234445543 245688
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
+.|+.+..+++ |+++++++.|++.+.+||+.
T Consensus 148 ~~~~~~~~~~~-----------------g~~~~~~~~~~l~~~~gw~~ 178 (434)
T PRK11663 148 WWAIWNTAHNV-----------------GGALIPLVVGAIALHYGWRY 178 (434)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHHHcccHHH
Confidence 99999988889 99999999999999999994
No 10
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.89 E-value=4.4e-05 Score=66.24 Aligned_cols=69 Identities=17% Similarity=0.194 Sum_probs=47.4
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+.+...+.++..+++..+...+.. +...|..+ ++..|++.|+....+++ |+++|+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~g~~~~~~~~~~~~-----------------g~~lgp 419 (496)
T PRK03893 365 NVWVLGLLLFFQQMLGQGISGLLP-KLIGGYFD-------TEQRAAGLGFTYNVGAL-----------------GGALAP 419 (496)
T ss_pred HHHHHHHHHHHHHHHhcccchhhH-HHHHhhCC-------HHHhhcccchhhhhhhH-----------------HHHHHH
Confidence 333333444444555444443443 34556554 34678999999999999 999999
Q ss_pred hHHHHhhhccCCcH
Q psy11630 115 IAAGLISDMTGKSA 128 (169)
Q Consensus 115 iliG~Isd~~GW~a 128 (169)
++.|++.|++||+.
T Consensus 420 ~l~g~l~~~~g~~~ 433 (496)
T PRK03893 420 ILGALIAQRLDLGT 433 (496)
T ss_pred HHHHHHhccCChHH
Confidence 99999999999983
No 11
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.88 E-value=2.9e-05 Score=67.45 Aligned_cols=64 Identities=27% Similarity=0.419 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+....++++++.+++..++..... +.+.|..+ +..|++.|+.+..|++ |+++++
T Consensus 360 ~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~--------~~~g~~~g~~~~~~~l-----------------~~~i~p 413 (465)
T TIGR00894 360 AFYLTIIILTLANAVSSGPLAGVL-INSLDLAP--------RFLGFIKGITGLPGFI-----------------GGLIAS 413 (465)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhh-hchhhcCh--------hHHHHHHHHHHHHHHH-----------------HHHHHH
Confidence 344445555566666655544442 34556543 5899999999999999 999999
Q ss_pred hHHHHhhhcc
Q psy11630 115 IAAGLISDMT 124 (169)
Q Consensus 115 iliG~Isd~~ 124 (169)
.++|++.|..
T Consensus 414 ~l~g~~~~~~ 423 (465)
T TIGR00894 414 TLAGNILSQD 423 (465)
T ss_pred HhhheeeCCC
Confidence 9999998865
No 12
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.78 E-value=0.0001 Score=62.55 Aligned_cols=103 Identities=21% Similarity=0.225 Sum_probs=69.0
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
+|.|+|... ...+.+.....+.+.+.+ .+.+...+++++.|+.......+. .+..+|..+.++.+..++..|++
T Consensus 282 ~r~g~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~ 355 (437)
T TIGR00792 282 KKFGRKILF----AGGILLMVLGYLIFFFAG-SNLPLILVLIILAGFGQNFVTGLV-WALVADTVDYGEWKTGVRAEGLV 355 (437)
T ss_pred HHhCcHHHH----HHHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhhhhhhhcCccchHHH
Confidence 455654322 333344444444444433 344444455556666555554444 45777888777777778889999
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.|+.+....+ |.++++.+.|++.|..|++
T Consensus 356 ~~~~~~~~~~-----------------g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 356 YSVRTFVRKL-----------------GQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHHcCCC
Confidence 9999998888 9999999999999998885
No 13
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.78 E-value=4.7e-05 Score=67.76 Aligned_cols=99 Identities=13% Similarity=0.159 Sum_probs=52.5
Q ss_pred CcCCCCCCCC-cchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 2 TRLGLKPPTS-RSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 2 ~~~g~~~~~~-~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
||+|||...+ |..+..+...+..+..+.+....+.+...+.+++.+++..+.+...- +...+++ ++..|+
T Consensus 313 Dr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~--------~~~~g~ 383 (476)
T PLN00028 313 DVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATF-GIVPFVS--------RRSLGV 383 (476)
T ss_pred HHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhc-ccCcccC--------hhhchh
Confidence 6777763321 22233222222222222222233444445555666766655544332 2334443 357899
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+.|+++..|++ |+++++.+.+ ..+..+|+
T Consensus 384 ~~g~~~~~g~l-----------------g~~i~~~l~~-~~~~~~y~ 412 (476)
T PLN00028 384 ISGLTGAGGNV-----------------GAVLTQLLFF-TGSSYSTE 412 (476)
T ss_pred hhhhhhccccH-----------------HHHHHHHHHH-hcCCccHh
Confidence 99999988888 8888777665 33334566
No 14
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.74 E-value=8.8e-05 Score=59.95 Aligned_cols=99 Identities=12% Similarity=0.138 Sum_probs=60.0
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... .+.+......++.+.+.+...........++.|++..+-+... .+...|..+ ++-.+++
T Consensus 265 dr~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~~~~~~~~-------~~~~~~~ 332 (377)
T TIGR00890 265 DKIGRQKTM----SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLF-PSLVSDIFG-------PANSAAN 332 (377)
T ss_pred HHHhhhhhh----hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhcc-HHHHHHHhh-------hhhhhhH
Confidence 567766444 3333334444444333332222222333445565554433333 345666654 3467889
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcHH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSAS 129 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~ 129 (169)
.|+.+...++ |+++++++.|++.|.+||+..
T Consensus 333 ~g~~~~~~~~-----------------g~~~~~~~~g~l~~~~g~~~~ 363 (377)
T TIGR00890 333 YGFLYTAKAV-----------------AGIFGGLIASHALTEIGFEYT 363 (377)
T ss_pred hHHHHHHHHH-----------------HHHHHHHHHHHHHhhhchhhH
Confidence 9999988888 999999999999999999953
No 15
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.71 E-value=0.00014 Score=62.26 Aligned_cols=36 Identities=11% Similarity=0.034 Sum_probs=31.1
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
++.+...|+.+..+++ |.++|+.+.+++.|++||+.
T Consensus 139 ~~~~~~~~~~~~~~~l-----------------g~~~g~~i~~~l~~~~gw~~ 174 (393)
T PRK15011 139 REAVMFSSFLRAQVSL-----------------AWVIGPPLAYALAMGFSFTV 174 (393)
T ss_pred chHHHHHHHHHHHHHH-----------------HHHHhhHHHHHHHHhcChHH
Confidence 4566677888888888 99999999999999999994
No 16
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=97.69 E-value=7.7e-05 Score=61.41 Aligned_cols=95 Identities=13% Similarity=0.122 Sum_probs=62.3
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..........+.... .++++..++..++.|+....-+... .+...|..++ +-.+.+
T Consensus 65 d~~g~r~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~-------~~~~~~ 130 (385)
T TIGR00710 65 DRYGRRPVL----LLGLFIFALSSLGLAL--SNNIETLLVLRFVQAFGASAGSVIS-QALVRDIYPG-------EELSRI 130 (385)
T ss_pred HhcCChHHH----HHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHcchhHHHHHH-HHHHHHhcCc-------HHHHHH
Confidence 678876544 3333333333333332 2456656666667776655444433 3456676553 457788
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.|+......+ |.++++.+.+++.+.+||+
T Consensus 131 ~~~~~~~~~~-----------------g~~~g~~~~~~l~~~~~~~ 159 (385)
T TIGR00710 131 YSILMPVLAL-----------------APAVAPLLGGYILVWLSWH 159 (385)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHHcCHH
Confidence 8998888888 9999999999999999999
No 17
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.69 E-value=0.00027 Score=49.02 Aligned_cols=96 Identities=17% Similarity=0.248 Sum_probs=63.0
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..........+.+.. ..+.+...+..++.|+.....+.... +...|..++ +-.+++
T Consensus 23 d~~g~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~-------~~~~~~ 88 (141)
T TIGR00880 23 DRFGRKPVL----LVGLFIFVLSTAMFAL--SSNITVLIIARFLQGFGAAFALVAGA-ALIADIYPP-------EERGVA 88 (141)
T ss_pred hhcchhHHH----HHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhHH-HHHHHHCCh-------hhhhHH
Confidence 566665443 2333333333333332 24556566667788877665555443 456677553 456788
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+....+.+ |.++++.+.|++.+..||+.
T Consensus 89 ~~~~~~~~~~-----------------g~~~~~~~~~~~~~~~~~~~ 118 (141)
T TIGR00880 89 LGLMSAGIAL-----------------GPLLGPPLGGVLAQFLGWRA 118 (141)
T ss_pred HHHHHHhHHH-----------------HHHHhHHhHHHHhcccchHH
Confidence 8999988888 99999999999999999973
No 18
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.69 E-value=0.00026 Score=58.29 Aligned_cols=99 Identities=13% Similarity=0.067 Sum_probs=54.4
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||.++ -+..+.......+.+.. ..+++..++.-++.|++.. ...-...+...|..+++ +++.+..
T Consensus 58 Dr~g~r~~~---~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~g~~~~-~~~p~~~~~~~~~~~~~-----~~~~~~~ 126 (375)
T TIGR00899 58 DYQGDRKGL---ILFCCLLAALACLLFAW--NRNYFLLLVLGVLLSSFAS-TANPQLFALAREHADRT-----GREAVMF 126 (375)
T ss_pred hccCCchHH---HHHHHHHHHHHHHHHHh--cchHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhhc-----chhhHHH
Confidence 788887765 33334443334344443 2445443333334444322 22212223344443322 3444444
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+....+++ |.++|+.+.+++.+.+||+.
T Consensus 127 ~~~~~~~~~~-----------------g~~ig~~~~~~l~~~~~~~~ 156 (375)
T TIGR00899 127 SSVMRAQISL-----------------AWVIGPPLAFWLALGFGFTV 156 (375)
T ss_pred HHHHHHHHhH-----------------HHHHhhhHHHHHHHhcccHH
Confidence 6676666677 99999999999999999993
No 19
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.68 E-value=0.00012 Score=60.39 Aligned_cols=73 Identities=15% Similarity=0.218 Sum_probs=53.0
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+.+...+.+++.|++..+...+.. +...|..+ ++..+++.|+.+..+++ |+++++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~g~~~~~~~~-----------------g~~~g~ 381 (405)
T TIGR00891 327 NVAVLGLGLFFQQMLVQGIWGILP-KHLGEYFP-------TDQRAAGLGFTYQLGNL-----------------GGALAP 381 (405)
T ss_pred chHHHHHHHHHHHHHHccchhhHH-HHHhhhCC-------cchhHHHhhHHHHHHHH-----------------HHHHHH
Confidence 444444555667777766665554 34456654 35679999999999999 999999
Q ss_pred hHHHHhhhccC-CcHHHHH
Q psy11630 115 IAAGLISDMTG-KSASVCA 132 (169)
Q Consensus 115 iliG~Isd~~G-W~a~~c~ 132 (169)
++.|++.|++| |+...+.
T Consensus 382 ~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 382 IIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHhccccchhHHh
Confidence 99999999999 7754333
No 20
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.68 E-value=0.00026 Score=60.59 Aligned_cols=96 Identities=10% Similarity=0.021 Sum_probs=58.2
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhcC-CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhh
Q psy11630 5 GLKPPTSRSKVQRVNHYTTELFIYQLLGA-TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTS 83 (169)
Q Consensus 5 g~~~~~~~~~v~~l~~~~~~l~~y~~~~~-~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtg 83 (169)
|||.+. -+.........++...+.++ .+++...++.++.+ +...++.....+...|..++ |-.+.+.|
T Consensus 65 g~rr~~---l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~al~~~~~~~-------~~r~~~~~ 133 (402)
T PRK11902 65 GRRRGW---LLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVA-FLSASQDIVFDAYSTDVLHP-------EERGAGAA 133 (402)
T ss_pred CcchhH---HHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCh-------hhhhHHHH
Confidence 777665 55555555545555444333 34554444444555 45555666666778888654 33455566
Q ss_pred hhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc-cCCcH
Q psy11630 84 IIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM-TGKSA 128 (169)
Q Consensus 84 iIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~-~GW~a 128 (169)
+.....++ |.++++.+.+++.+. +||+.
T Consensus 134 ~~~~g~~~-----------------g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 134 VKVLGYRL-----------------AMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHHHHH-----------------HHHHHhHHHHHHHhcccCHHH
Confidence 65543445 788888888888885 59993
No 21
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.67 E-value=0.0002 Score=57.95 Aligned_cols=97 Identities=12% Similarity=-0.010 Sum_probs=60.8
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||... ++...+.....+++.+. .+.+..++..++.|++...-+... .+...|..++ +-.+.
T Consensus 54 ~dr~g~r~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~-------~~r~~ 119 (379)
T TIGR00881 54 SDRSNPRVFL----PIGLILCAIVNLFFGFS--TSLWVMAALWALNGIFQGMGWPPC-GRTVTKWFSR-------SERGT 119 (379)
T ss_pred HHhhCCeehh----HHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhhccccCCch-HHHHHHhcCH-------hhhee
Confidence 3788888665 33333333333333332 356666666677777655433333 3455566543 35677
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhh-hHHHHhhhccCCcH
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG-IAAGLISDMTGKSA 128 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg-iliG~Isd~~GW~a 128 (169)
+.|+.+....+ |+++++ ++.+.+.+..||+.
T Consensus 120 ~~~~~~~~~~~-----------------g~~~~~~~~~~~~~~~~~~~~ 151 (379)
T TIGR00881 120 WVSFWNCSHNV-----------------GGGLLPPLVLFGIAELYSWHW 151 (379)
T ss_pred eEeehhccchh-----------------HHHHHHHHHHHHHHhcCCchh
Confidence 78888888888 999988 56777888889994
No 22
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.66 E-value=0.00036 Score=59.67 Aligned_cols=68 Identities=15% Similarity=0.187 Sum_probs=48.8
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+.+...+.+++.|+.......+. .+...|..+ ++..|++.|+.....++ |.++|+
T Consensus 311 ~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p-------~~~~g~~~g~~~~~~~~-----------------g~~~g~ 365 (417)
T PRK10489 311 MWILAVLCLALFGYLSAISSLLQ-YTLLQTQTP-------DEMLGRINGLWTAQNVT-----------------GDAIGA 365 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCC-------HHHHHHHHHHHHHHHhh-----------------hHhHHH
Confidence 44445556666776554332222 345556654 35889999999988888 999999
Q ss_pred hHHHHhhhccCCc
Q psy11630 115 IAAGLISDMTGKS 127 (169)
Q Consensus 115 iliG~Isd~~GW~ 127 (169)
.+.|++.|.+|..
T Consensus 366 ~l~G~l~~~~g~~ 378 (417)
T PRK10489 366 ALLGGLGAMMTPV 378 (417)
T ss_pred HHHHHHHHHhchh
Confidence 9999999998887
No 23
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.64 E-value=0.00016 Score=62.41 Aligned_cols=96 Identities=15% Similarity=0.190 Sum_probs=65.2
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..+.+.....+.+.+ .++++..++.-++.|+....-+... .+...|..++ |-.+.+
T Consensus 80 Dr~grr~~~----~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~-~~~i~~~~~~-------~~~~~a 145 (394)
T PRK10213 80 QATDRRYVV----ILFAVLLTLSCLLVSF--ANSFSLLLIGRACLGLALGGFWAMS-ASLTMRLVPP-------RTVPKA 145 (394)
T ss_pred cccCcHHHH----HHHHHHHHHHHHHHHH--HChHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHcCH-------hHHHHH
Confidence 788887544 3333444444444433 3566666666677787776644333 4566777653 457778
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+.....++ |.++++++.+++.+.+||+.
T Consensus 146 ~~~~~~~~~~-----------------g~~ig~~l~~~l~~~~gw~~ 175 (394)
T PRK10213 146 LSVIFGAVSI-----------------ALVIAAPLGSFLGELIGWRN 175 (394)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHhhcCHHH
Confidence 8888888888 99999999999999999994
No 24
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.62 E-value=0.00013 Score=61.93 Aligned_cols=61 Identities=18% Similarity=0.113 Sum_probs=44.2
Q ss_pred HHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh
Q psy11630 42 LLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS 121 (169)
Q Consensus 42 ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is 121 (169)
+++..++...|...++. +...|..+ ++..+++.|++...+++ |+++++++.|++.
T Consensus 327 ~~~~~~~~~~~~~~~~~-~~~~~~~p-------~~~~g~~~g~~~~~~~~-----------------~~~~gp~~~g~l~ 381 (426)
T PRK12307 327 CLFGLMATNVGVGGLVP-KFLYDYFP-------LEVRGLGTGLIYNLAAT-----------------SGTFNSMAATWLG 381 (426)
T ss_pred HHHHHHHhcccHhHHHH-HHHHHhCc-------HHHHhhhhhHHHHHHhH-----------------HHHHHHHHHHHHH
Confidence 33344444445544443 34566655 35789999999999999 9999999999999
Q ss_pred hccCCc
Q psy11630 122 DMTGKS 127 (169)
Q Consensus 122 d~~GW~ 127 (169)
|++|..
T Consensus 382 ~~~g~~ 387 (426)
T PRK12307 382 ITMGLG 387 (426)
T ss_pred HcccHH
Confidence 988855
No 25
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.61 E-value=0.0002 Score=60.38 Aligned_cols=83 Identities=14% Similarity=0.034 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccc
Q psy11630 19 NHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTL 98 (169)
Q Consensus 19 ~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~ 98 (169)
.+....++.+.+ ..+.+..++..++.|+...+.+.... +...|..+ ++..+++.|+.+...++
T Consensus 287 ~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~-~~~~~~~~-------~~~~g~~~g~~~~~~~~------- 349 (399)
T PRK05122 287 LVEILGLLLLWL--APSPWMALIGAALTGFGFSLVFPALG-VEAVKRVP-------PQNRGAALGAYSVFLDL------- 349 (399)
T ss_pred HHHHHHHHHHHH--hccHHHHHHHHHHHHHhHHHHHHHHH-HHHHHhCC-------HHHHHHHHHHHHHHHHH-------
Confidence 333444444443 23444455556677777665554443 23344433 35788999999888888
Q ss_pred cCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 99 SGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 99 a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
|.++++.+.|++.|++||+.
T Consensus 350 ----------g~~~~~~~~g~l~~~~g~~~ 369 (399)
T PRK05122 350 ----------SLGITGPLAGLVASWFGYPS 369 (399)
T ss_pred ----------HHHHHHHHHHHHHHHcCHHH
Confidence 99999999999999999983
No 26
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.61 E-value=0.00019 Score=59.11 Aligned_cols=97 Identities=14% Similarity=0.191 Sum_probs=60.4
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||... .+. ........+...+ ..+++..++..++.|+...+-+... .+...|..++ +-.+.
T Consensus 71 ~Dr~g~r~~~---~~~-~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~~~~~~~~~~-~~~i~~~~~~-------~~~~~ 136 (405)
T TIGR00891 71 GDRYGRRLPM---VTS-IVLFSAGTLACGF--APGYITMFIARLVIGIGMGGEYGSS-AAYVIESWPK-------HLRNK 136 (405)
T ss_pred HHHhccHHHH---HHH-HHHHHHHHHHHHH--hccHHHHHHHHHHHHhhhhhhhHHH-HHHHHHhCCh-------hhhhH
Confidence 3788988766 322 2222222222222 2456666666677777655544333 3455666542 34567
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC--CcH
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG--KSA 128 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G--W~a 128 (169)
+.|+......+ |.++++.+.+.+.+..| |+.
T Consensus 137 ~~~~~~~~~~~-----------------g~~~~~~l~~~l~~~~~~~w~~ 169 (405)
T TIGR00891 137 ASGLLISGYAV-----------------GAVVAAQVYSLVVPVWGDGWRA 169 (405)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHHHhcCccHHH
Confidence 78888777777 99999999999988776 984
No 27
>PRK10054 putative transporter; Provisional
Probab=97.61 E-value=0.00035 Score=60.35 Aligned_cols=95 Identities=13% Similarity=0.157 Sum_probs=56.7
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||... ++.+.....+.+.+.+. ++.+..++..++.|... ++..-...+...|..+ ++..++
T Consensus 67 ~Dr~g~k~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~-------~~~~~~ 132 (395)
T PRK10054 67 ADKFDKKRYM----LLAITAFASGFIAIPLV--NNVTLVVLFFALINCAY-SVFSTVLKAWFADNLS-------STSKTK 132 (395)
T ss_pred HhhcCcchhH----HHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcC-------HhHHHH
Confidence 3788988544 34444444444444432 33443333344444432 2322222344456644 245778
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+.|+....+++ |.++++++.+++.+ +||+
T Consensus 133 ~~g~~~~~~~l-----------------g~~igp~l~~~l~~-~g~~ 161 (395)
T PRK10054 133 IFSLNYTMLNI-----------------GWTVGPPLGTLLVM-QSIN 161 (395)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHHH-hccC
Confidence 88888888889 99999999999886 7999
No 28
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.61 E-value=0.00021 Score=57.70 Aligned_cols=100 Identities=17% Similarity=0.078 Sum_probs=61.1
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHh--hcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQL--LGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKAL 78 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~--~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~ 78 (169)
.||.|||... .+..+......++.... .+..+.+...+..++.|+... ...-...+...|..++ +-.
T Consensus 58 ~dr~g~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~-------~~~ 126 (365)
T TIGR00900 58 ADRYDRKKVM---IGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQA-FFTPAYQAMLPDLVPE-------EQL 126 (365)
T ss_pred HHhhchhHHH---HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCH-------HHH
Confidence 3788888665 33222222222222111 122256655566666675543 3333334566777663 356
Q ss_pred hhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 79 ATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 79 atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
+.+.|+......+ |.++++.+.+++.+.+||+.
T Consensus 127 ~~~~~~~~~~~~~-----------------g~~~g~~l~~~l~~~~g~~~ 159 (365)
T TIGR00900 127 TQANSLSQAVRSL-----------------FYIVGPGIGGLMYATLGIKW 159 (365)
T ss_pred HHHHhHHHHHHHH-----------------HHHHHHHHHHHHHHHhhHHH
Confidence 6778888888888 99999999999999999993
No 29
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.60 E-value=0.00021 Score=60.32 Aligned_cols=68 Identities=16% Similarity=0.219 Sum_probs=51.8
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+.+...+..++.|++..+.+.... +...|..+ ++..+++.|+.+..+++ |+++|+
T Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~p-------~~~~g~~~g~~~~~~~~-----------------g~~~g~ 361 (406)
T PRK11551 307 SFAGMLLAGFAAGLFVVGGQSVLY-ALAPLFYP-------TQVRGTGVGAAVAVGRL-----------------GSMAGP 361 (406)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHcc-------hhhhhhhhhHHHHhhhH-----------------HHHHHh
Confidence 444445556678888877776664 46667655 35789999999999999 999999
Q ss_pred hHHHHhhhccCCc
Q psy11630 115 IAAGLISDMTGKS 127 (169)
Q Consensus 115 iliG~Isd~~GW~ 127 (169)
.+.|++.|+.++.
T Consensus 362 ~~~g~l~~~~~~~ 374 (406)
T PRK11551 362 LLAGQLLALGRST 374 (406)
T ss_pred hhHhhhhccCCch
Confidence 9999999976544
No 30
>PRK03699 putative transporter; Provisional
Probab=97.56 E-value=0.00055 Score=58.45 Aligned_cols=68 Identities=19% Similarity=0.220 Sum_probs=49.0
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.+.+...+..+..|++..+++..+.+ ...|..++ ..+...|++...+++ |++++
T Consensus 292 ~~~~~~~~~~~~~G~~~~~~~~~~~~-~~~~~~~~--------~~~~~~g~~~~~~~~-----------------g~~i~ 345 (394)
T PRK03699 292 DDPSHLLYAILGLGFFSSAIYTTIIT-LGSQQTKV--------ASPKLVNFILTCGTI-----------------GTMLT 345 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHH-HHHHHccC--------CCHHHHHHHHHhhhH-----------------HHHHH
Confidence 34444455567889888888777643 44454432 224556888888888 99999
Q ss_pred hhHHHHhhhccCCc
Q psy11630 114 GIAAGLISDMTGKS 127 (169)
Q Consensus 114 giliG~Isd~~GW~ 127 (169)
+.+.|++.|.+||+
T Consensus 346 p~~~G~l~~~~g~~ 359 (394)
T PRK03699 346 FVVTSPIVAHFGLQ 359 (394)
T ss_pred HHHHHHHHHHhCch
Confidence 99999999999998
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.56 E-value=0.0004 Score=58.95 Aligned_cols=97 Identities=18% Similarity=0.222 Sum_probs=62.9
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||.-. +..........++..+ ..+.+...+.-++.|+...+.+.... +...|.-+. +..+.+
T Consensus 78 dr~g~r~~l----~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~g~g~~~~~~~-~~~~~~~~~-------~~r~~~ 143 (426)
T PRK12307 78 DKFGRKPLM----MWSIVAYSVGTGLSGL--ASGVIMLTLSRFIVGMGMAGEYACAS-TYAVESWPK-------HLKSKA 143 (426)
T ss_pred HHhCChHHH----HHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHhCCH-------hHhhHh
Confidence 677877555 3333333333333332 24566666666788887777666554 455666542 345677
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcHH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSAS 129 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~ 129 (169)
.|+......+ |.++++.+.+.+.+.+||+..
T Consensus 144 ~~~~~~~~~l-----------------g~~~~~~l~~~l~~~~~w~~~ 174 (426)
T PRK12307 144 SAFLVSGFGI-----------------GNIIAAYFMPSFAEAYGWRAA 174 (426)
T ss_pred hhHHHHHHhH-----------------HHHHHHHHHHHHcccCCHHHH
Confidence 7877766667 888999999999999999953
No 32
>TIGR00895 2A0115 benzoate transport.
Probab=97.55 E-value=0.00025 Score=57.91 Aligned_cols=69 Identities=23% Similarity=0.307 Sum_probs=51.3
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.+.+..++..++.|+...+.+.... +...|..++ +-.+++.|+......+ |.+++
T Consensus 103 ~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~-------~~r~~~~~~~~~~~~~-----------------g~~~~ 157 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLGGLMPNLN-ALVSEYAPK-------RFRGTAVGLMFCGYPI-----------------GAAVG 157 (398)
T ss_pred cchHHHHHHHHHHhcccccchhhHH-HHHHHHcCH-------HhhchhHhhHhhHHHH-----------------HHHHH
Confidence 4566666667788877666555543 466666542 4567788888888888 99999
Q ss_pred hhHHHHhhhccCCc
Q psy11630 114 GIAAGLISDMTGKS 127 (169)
Q Consensus 114 giliG~Isd~~GW~ 127 (169)
+.+.|++.+.+||+
T Consensus 158 ~~~~~~l~~~~g~~ 171 (398)
T TIGR00895 158 GFLAGWLIPVFGWR 171 (398)
T ss_pred HHHHHHHhhcccce
Confidence 99999999999998
No 33
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.54 E-value=0.00016 Score=61.05 Aligned_cols=97 Identities=18% Similarity=0.175 Sum_probs=58.2
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||+.. +..........+.+.. ..+.+..++..++.|+....-+... .+...|..+ ++-.+.
T Consensus 62 ~Dr~g~r~~l----~~~~~~~~i~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~-~~~i~~~~~-------~~~r~~ 127 (392)
T PRK10473 62 ADRSGRKPVA----IPGAALFIIASLLCSL--AETSSLFLAGRFLQGIGAGCCYVVA-FAILRDTLD-------DRRRAK 127 (392)
T ss_pred HHHhCChHHH----HHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHcC-------HHHHHH
Confidence 3788887654 2222222223233222 2445544555556776544433333 345556544 245677
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
+.|+.++...+ |.++++++.+++.+.+||+.
T Consensus 128 ~~~~~~~~~~i-----------------~~~~~~~i~~~l~~~~g~~~ 158 (392)
T PRK10473 128 VLSLLNGITCI-----------------IPVLAPVLGHLIMLKFPWQS 158 (392)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHHhCcChHH
Confidence 77888888888 88899999999988899983
No 34
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.52 E-value=0.00029 Score=62.55 Aligned_cols=98 Identities=11% Similarity=0.120 Sum_probs=55.5
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... .+..+...+..+..+......+....++..++.|++..+...... +...|+-+ ++.-+++
T Consensus 311 dr~grr~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~-~~~~~~~p-------~~~Rg~~ 379 (490)
T PRK10642 311 DRFGRRPFV---ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMA-STLPAMFP-------THIRYSA 379 (490)
T ss_pred HHhccHHHH---HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCC-------CccchHH
Confidence 678887544 222221222222223222334444444445566666554444443 34446544 3466777
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC-Cc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG-KS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G-W~ 127 (169)
.|+....+.+ ++++++.++|++.|..+ |+
T Consensus 380 ~g~~~~~~~~-----------------~g~~~p~i~g~l~~~~~~~~ 409 (490)
T PRK10642 380 LAAAFNISVL-----------------VAGLTPTLAAWLVESTQNLM 409 (490)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHHhCCch
Confidence 7877777777 88889999999998765 55
No 35
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.50 E-value=0.00039 Score=57.76 Aligned_cols=96 Identities=16% Similarity=0.186 Sum_probs=60.8
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||.-. +..+.+.....+.+.+ ..+.+...+..++.|++...-.... .+...|..++ +-.+.+
T Consensus 51 d~~g~~~~~----~~~~~~~~i~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~-------~~~~~~ 116 (377)
T PRK11102 51 DSFGRKPVI----LGGTLVFALAAVACAL--AQTIDQLIYMRFLHGLAAAAASVVI-NALMRDMFPK-------EEFSRM 116 (377)
T ss_pred hhcCChHHH----HHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCH-------HHHHHH
Confidence 677765433 4444444444444443 2445555566667776654433333 3556666543 456777
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+......+ |.++++++.+++.+.+||+.
T Consensus 117 ~~~~~~~~~~-----------------g~~~~~~~~~~l~~~~~~~~ 146 (377)
T PRK11102 117 MSFVTLVMTI-----------------APLLAPIIGGWLLVWFSWHA 146 (377)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHHcChHH
Confidence 7888777778 88999999999999999983
No 36
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.50 E-value=0.00027 Score=56.99 Aligned_cols=95 Identities=15% Similarity=0.181 Sum_probs=61.9
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||.. -+....+.....+...+ . .+.+..++..++.|+....-.... .+...|..++ +-.+.+
T Consensus 57 dr~g~r~~----l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~g~~~~~~~~~~-~~~i~~~~~~-------~~~~~~ 122 (352)
T PF07690_consen 57 DRFGRRRV----LIIGLLLFALGSLLLAF-A-SNFWLLLIARFLLGIGSGFFSPAS-NALIADWFPP-------EERGRA 122 (352)
T ss_dssp HHS-HHHH----HHHHHHHHHHHHHHHHH-H-CCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCT-------CCHHHH
T ss_pred HHcCCeee----EeehhhhhhhHHHHhhh-h-hhHHHHhhhccccccccccccccc-cccccccchh-------hhhhhc
Confidence 67777663 34444444444222222 2 445566677778887764433333 4567777663 356677
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.|+.....++ |.++++.+.+++.+.+||+
T Consensus 123 ~~~~~~~~~~-----------------g~~~g~~l~~~l~~~~~~~ 151 (352)
T PF07690_consen 123 FGILSAGFSL-----------------GSILGPLLGGFLISYFGWR 151 (352)
T ss_dssp HHHHHHHHHH-----------------HHHHHHHHHHHCCCHCHHC
T ss_pred cccccchhhh-----------------hhhcccchhhhhhhccccc
Confidence 7888888888 9999999999999999999
No 37
>PRK03545 putative arabinose transporter; Provisional
Probab=97.47 E-value=0.00046 Score=58.51 Aligned_cols=96 Identities=10% Similarity=0.099 Sum_probs=59.1
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..+.+...+.+.+.+ .++++...+.-++.|+... ...-...+...|..++ +-.+.+
T Consensus 69 dr~g~r~~~----~~~~~~~~~~~~~~~~--~~~~~~l~~~r~~~G~~~~-~~~~~~~~~i~~~~~~-------~~r~~~ 134 (390)
T PRK03545 69 SNVERRKLL----IGLFVLFIASHVLSAL--AWNFTVLLISRIGIAFAHA-IFWSITASLAIRVAPA-------GKKAQA 134 (390)
T ss_pred cCCChHHHH----HHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCh-------hhhhhH
Confidence 788888655 3333333333333332 3456655555556665542 2222223455666553 235677
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+....+.+ |.++++.+.+.+.+++||+.
T Consensus 135 ~g~~~~~~~~-----------------g~~ig~~l~~~l~~~~gw~~ 164 (390)
T PRK03545 135 LSLLATGTAL-----------------AMVLGLPLGRVIGQYLGWRT 164 (390)
T ss_pred HHHHHHHHHH-----------------HHHHHhhHHHHHHHHhcHHH
Confidence 7787777777 88899999999999999993
No 38
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.41 E-value=0.0008 Score=57.73 Aligned_cols=68 Identities=18% Similarity=0.307 Sum_probs=48.2
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
++.+...+..++.|++..+-.. .. +...|..+ +..+++.|+.+..+++ |++++
T Consensus 314 ~~~~~~~~~~~~~G~~~~~~~~-~~-~~~~~~~~--------~~~g~~~g~~~~~~~l-----------------g~~~g 366 (402)
T TIGR00897 314 HSFAVALIIAIALGIFLAGYVP-LA-AVFPTLAP--------KHKGAAMSVLNLSAGL-----------------SAFLA 366 (402)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-HH-HHHHhhCc--------chhHHHHHHHHHHHHH-----------------HHHHH
Confidence 3455455556677777665322 22 23344432 2468999999999999 99999
Q ss_pred hhHHHHhhhccCCcH
Q psy11630 114 GIAAGLISDMTGKSA 128 (169)
Q Consensus 114 giliG~Isd~~GW~a 128 (169)
+++.|++.|.+||.+
T Consensus 367 p~i~g~l~~~~g~~~ 381 (402)
T TIGR00897 367 PAIAVLFIGFFGAIG 381 (402)
T ss_pred HHHHHHHHhhcchHH
Confidence 999999999999884
No 39
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.38 E-value=0.00035 Score=58.01 Aligned_cols=44 Identities=11% Similarity=0.052 Sum_probs=36.5
Q ss_pred HHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 60 AVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 60 a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+...|..++ +..+++.|+.+..+++ |+++++.+.|++.|+.||.
T Consensus 406 ~~~~~~~p~-------~~~~~~~~~~~~~~~l-----------------g~~i~~~~~~~~~~~~~~~ 449 (481)
T TIGR00879 406 VIVSEIFPL-------SLRPKGISIAVAANWL-----------------ANFIVGFLFPTMLESIGVG 449 (481)
T ss_pred hhhhccCCh-------HHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHhcCcc
Confidence 455677553 4678899999998889 9999999999999998888
No 40
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.37 E-value=0.00066 Score=56.84 Aligned_cols=95 Identities=22% Similarity=0.250 Sum_probs=56.5
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..........+.+.. .++++...+..++.|+. .+-+... .+...|..++ +-.+.+
T Consensus 79 dr~g~r~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~~~-------~~~~~~ 143 (408)
T PRK09874 79 DRKGRKIML----LRSALGMGIVMVLMGL--AQNIWQFLILRALLGLL-GGFVPNA-NALIATQVPR-------NKSGWA 143 (408)
T ss_pred hhhCcHHHH----HHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHh-hhhHHhH-HHHHHHhcCH-------hhhhHH
Confidence 788877554 3333333344444433 24555555555566654 2222222 2334444432 234677
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+....+.+ |.++++++.|++.+.+||+.
T Consensus 144 ~~~~~~~~~~-----------------g~~~~~~~~~~l~~~~~~~~ 173 (408)
T PRK09874 144 LGTLSTGGVS-----------------GALLGPLAGGLLADSYGLRP 173 (408)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHHhCHHH
Confidence 7888777778 88899999999999999993
No 41
>PRK09669 putative symporter YagG; Provisional
Probab=97.37 E-value=0.00036 Score=60.81 Aligned_cols=79 Identities=15% Similarity=0.061 Sum_probs=62.0
Q ss_pred hcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccch
Q psy11630 31 LGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGG 110 (169)
Q Consensus 31 ~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGa 110 (169)
.++.+.+...+..++.|+...+...+. .+...|..++++.+..++.-|...|+...+..+ |.
T Consensus 314 ~~~~~~~~~~~~~~i~g~~~~~~~~~~-~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~kl-----------------g~ 375 (444)
T PRK09669 314 IPPSNVWLIFALNILFNFIQNLTTPLQ-WSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKL-----------------GL 375 (444)
T ss_pred hCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHH-----------------HH
Confidence 345555555555567777777666666 467789988888888888999999998888888 99
Q ss_pred hhhhhHHHHhhhccCCc
Q psy11630 111 IFGGIAAGLISDMTGKS 127 (169)
Q Consensus 111 aiggiliG~Isd~~GW~ 127 (169)
++|+.+.|++.|..|.+
T Consensus 376 alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 376 AIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 99999999999988884
No 42
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.37 E-value=0.00032 Score=68.00 Aligned_cols=92 Identities=17% Similarity=0.220 Sum_probs=65.5
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
+||+|||... +..+++...+.+++.+. .+....+++.++.|++..+-..... +..+|+-+. +--++
T Consensus 619 ~Dr~GRr~~l----~~~~~lsai~~ll~~~~--~s~~~ll~~~~l~g~~~~~~~~~~~-a~~aEl~Pt-------~~Rgt 684 (742)
T TIGR01299 619 MDKIGRLRML----AGSMVLSCISCFFLSFG--NSESAMIALLCLFGGLSIAAWNALD-VLTVELYPS-------DKRAT 684 (742)
T ss_pred HHHhCCHHHH----HHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCH-------HHHHH
Confidence 3788988765 44455555555555543 2334444555677888777666664 678888663 46799
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM 123 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~ 123 (169)
+.|+.+..+.+ |+++|+++.|++.+.
T Consensus 685 a~Gi~~~~~rl-----------------Gaiigp~i~g~L~~~ 710 (742)
T TIGR01299 685 AFGFLNALCKA-----------------AAVLGILIFGSFVGI 710 (742)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHHHh
Confidence 99999999999 999999999988774
No 43
>TIGR00898 2A0119 cation transport protein.
Probab=97.36 E-value=0.00037 Score=60.97 Aligned_cols=91 Identities=12% Similarity=0.132 Sum_probs=58.1
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
+|.|||... ++.+......++.+.+.+....+...+++++.+++..+.+.+.. +...|+-+. +..+++
T Consensus 380 dr~grr~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~p~-------~~r~~~ 447 (505)
T TIGR00898 380 DRLGRRYTM----AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVY-LYTAELYPT-------VVRNLG 447 (505)
T ss_pred HHhCCHHHH----HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH-HHhcccccH-------HHHhhh
Confidence 678887655 33334444444444444433334444555566666666666554 567787653 466788
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
.|+.+..+.+ |+++++.+.+ +.+
T Consensus 448 ~g~~~~~~~i-----------------g~~i~p~i~~-~~~ 470 (505)
T TIGR00898 448 VGVCSTMARV-----------------GSIISPFLVY-LGE 470 (505)
T ss_pred HhHHHHHHHH-----------------HHHHHhHHHH-HHH
Confidence 8999999999 9999999998 444
No 44
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.36 E-value=0.00051 Score=57.95 Aligned_cols=96 Identities=19% Similarity=0.156 Sum_probs=62.0
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... .. ...+.....+...+ ..+++..++..++.|+....-.... .+...|..+ ++..+++
T Consensus 75 dr~g~r~~~---~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~-~~~~~~~~~-------~~~r~~~ 140 (406)
T PRK11551 75 DRIGRKRIL---IV-SVALFGLFSLATAQ--AWDFPSLLVARLLTGVGLGGALPNL-IALTSEAVG-------PRLRGTA 140 (406)
T ss_pred HHhCCchhH---HH-HHHHHHHHHHHHHH--hccHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHcC-------HHHHHHH
Confidence 788888766 22 22222222223332 3456666666677787665544333 345666654 2466788
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+......+ |+++++++.+.+.+.++|+.
T Consensus 141 ~~~~~~~~~~-----------------g~~~~~~~~~~~~~~~~~~~ 170 (406)
T PRK11551 141 VSLMYCGVPF-----------------GGALASVIGVLAAGDAAWRH 170 (406)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHccccCHHH
Confidence 8888877777 99999998889999999994
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.35 E-value=0.00036 Score=59.91 Aligned_cols=96 Identities=14% Similarity=0.056 Sum_probs=62.1
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..........+... ...+++..++..++.|+...+...... +...|..++ +-.+.+
T Consensus 62 dr~g~r~~~----~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~G~~~~~~~~~~~-~~i~~~~~~-------~~r~~~ 127 (485)
T TIGR00711 62 KRFGTRRLF----LISTFAFTLGSLLCG--VAPNLELMIIFRVIQGFGGGPLIPLSF-STLLNIYPP-------EKRGRA 127 (485)
T ss_pred HHhCcHHHH----HHHHHHHHHHHHHHh--CcCCHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHCCH-------HHHHHH
Confidence 677877554 222333333333333 234666666667778877665554443 456677553 345777
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+......+ |.++|+.+.|++.+++||+.
T Consensus 128 ~~~~~~~~~~-----------------g~~~g~~~~~~l~~~~~w~~ 157 (485)
T TIGR00711 128 MAIWGLTVLV-----------------APALGPTLGGWIIENYHWRW 157 (485)
T ss_pred HHHHHHHHHH-----------------HhhhhhccHhHhccCcCcee
Confidence 7887777777 88899999999999999993
No 46
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.35 E-value=0.0006 Score=60.77 Aligned_cols=97 Identities=14% Similarity=0.136 Sum_probs=60.4
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||.-. ++.+.+.....+...+ ..+++..++.-++.|+...+-+......+..+..+ ++..+.+
T Consensus 66 D~~Grk~~l----~~~~~~~~~~~~~~~~--a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~-------~~~r~~~ 132 (495)
T PRK14995 66 DRIGFKRLL----MLGGTLFGLASLAAAF--SPTASWLIATRALLAIGAAMIVPATLAGIRATFTE-------EKQRNMA 132 (495)
T ss_pred HHhccHHHH----HHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------HHHHHHH
Confidence 677776555 3333333333333332 35666666555667765554333232233344433 2456777
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+....+.+ |.++|+++.|++.+++|||.
T Consensus 133 ~g~~~~~~~~-----------------g~~~gp~lgg~l~~~~gwr~ 162 (495)
T PRK14995 133 LGVWAAVGSG-----------------GAAFGPLVGGILLEHFYWGS 162 (495)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHhhccCChHH
Confidence 8888888888 99999999999999999993
No 47
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.34 E-value=0.0016 Score=56.02 Aligned_cols=20 Identities=30% Similarity=0.418 Sum_probs=18.7
Q ss_pred chhhhhhHHHHhhhccCCcH
Q psy11630 109 GGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~a 128 (169)
|+++++++.|++.|.+||+.
T Consensus 364 g~~ig~~~~G~l~~~~G~~~ 383 (420)
T PRK09528 364 GAVFLSTLAGNLYDSIGFQG 383 (420)
T ss_pred HHHHHHHHHHHHHHhhCchH
Confidence 99999999999999999993
No 48
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.34 E-value=0.0014 Score=56.97 Aligned_cols=99 Identities=15% Similarity=0.084 Sum_probs=58.2
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhc--CCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLG--ATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKAL 78 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~--~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~ 78 (169)
.||+|||... +..+.......+.+...+ ..+.....+..++.|++...-+.... ....|.-+ ++-.
T Consensus 85 ~dr~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~-~~i~~~~~-------~~~r 152 (438)
T TIGR00712 85 SDRSNPRVFL----PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCG-RTMVHWWS-------QSER 152 (438)
T ss_pred hhccCCceeh----HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHH-HHHHHhcC-------cccc
Confidence 3788887655 333333333333332221 13344444555667776554333332 33445544 3468
Q ss_pred hhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh-hccCCcH
Q psy11630 79 ATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS-DMTGKSA 128 (169)
Q Consensus 79 atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is-d~~GW~a 128 (169)
+++.|+.+...++ |+++++.+.+.+. +..||+.
T Consensus 153 g~~~~~~~~~~~~-----------------g~~~~~~l~~~~~~~~~~w~~ 186 (438)
T TIGR00712 153 GTIVSIWNCAHNI-----------------GGGIPPLLVLLGMAWFNDWHA 186 (438)
T ss_pred hhHHHHHHHHHHh-----------------HhHHHHHHHHHHHHHhhhhHH
Confidence 8999999888888 8889888887644 4579994
No 49
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.34 E-value=0.00038 Score=57.80 Aligned_cols=99 Identities=19% Similarity=0.096 Sum_probs=58.9
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||... .+..+...+..++........+.+..++.-++.|+...+-+... .+...|..++ +-.+.
T Consensus 95 ~d~~grr~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~-~~~i~~~~~~-------~~r~~ 163 (481)
T TIGR00879 95 SDRFGRKKSL---LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALV-PMYLSEIAPK-------ALRGA 163 (481)
T ss_pred hhhhhhHHHH---HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHH-HHHHHccCCh-------hhhhh
Confidence 3788887655 22222222222222221122234455556667887665555444 4566777653 34466
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHH---HHhhhccCCc
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAA---GLISDMTGKS 127 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggili---G~Isd~~GW~ 127 (169)
+.|+......+ |.++++.+. +.+.+..||+
T Consensus 164 ~~~~~~~~~~~-----------------G~~~~~~~~~~~~~~~~~~~w~ 196 (481)
T TIGR00879 164 LTSLYQLAITF-----------------GILVAYGFGSGKVSLNNTLGWR 196 (481)
T ss_pred hhhHHHHHHHH-----------------HHHHHHHHHHHhhcCCCCccHH
Confidence 77777777777 888888888 7777788999
No 50
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.33 E-value=0.00092 Score=60.15 Aligned_cols=98 Identities=12% Similarity=0.023 Sum_probs=63.6
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh-cCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 3 RLGLKPPTSRSKVQRVNHYTTELFIYQLL-GATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 3 ~~g~~~~~~~~~v~~l~~~~~~l~~y~~~-~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
|+|||.+. -+....+...++....+. +..+++...+..++.|++.. ++.....+...|.-++ +-.+.+
T Consensus 76 ~~Grrr~~---ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a-~~~i~~~a~~~~~~~~-------~~rg~~ 144 (491)
T PRK11010 76 FLGRRRGW---LLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSA-SQDIVFDAWKTDVLPA-------EERGAG 144 (491)
T ss_pred CCCCchHH---HHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCh-------hhhHHH
Confidence 34887765 444444444444444333 33456656555666777655 5555556788888664 345667
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh-ccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD-MTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd-~~GW~a 128 (169)
.|+......+ |.++++.+.+++.+ ..||+.
T Consensus 145 ~~i~~~g~~l-----------------G~llg~~l~~~l~~~~~GWr~ 175 (491)
T PRK11010 145 AAISVLGYRL-----------------AMLVSGGLALWLADRYLGWQG 175 (491)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHhcccCHHH
Confidence 7777766667 88899999999998 579993
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.33 E-value=0.001 Score=56.19 Aligned_cols=97 Identities=16% Similarity=0.197 Sum_probs=57.3
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||... . ..+.......++... ..+.+..++..++.|+......... .....|.-+. +..+.
T Consensus 67 ~Dr~grr~~~---~-~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~-~~~~~~~~~~-------~~~~~ 132 (394)
T PRK11652 67 SDRVGRRPVI---L-VGMSIFILGTLVALF--AHSLTVLIAASAIQGLGTGVGGVMA-RTLPRDLYEG-------TQLRH 132 (394)
T ss_pred HHhcCChHHH---H-HHHHHHHHHHHHHHH--HccHHHHHHHHHHHHhhhhHHHHHH-HHHHHHhcCH-------HHHHH
Confidence 3788887765 2 233333333333332 2456655666667776654333222 2344454332 34556
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
+.++.+....+ |..+++++.+++.+.+||+.
T Consensus 133 ~~~~~~~~~~~-----------------~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 133 ANSLLNMGILV-----------------SPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHHhccChHH
Confidence 66766655556 78889999999999999993
No 52
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.31 E-value=0.0011 Score=57.11 Aligned_cols=35 Identities=14% Similarity=0.255 Sum_probs=32.0
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC-Cc
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG-KS 127 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G-W~ 127 (169)
+..+++.|+++..+++ ++++++++.|++.|.+| |+
T Consensus 325 ~~~g~~~g~~~~~~~~-----------------~~~~gp~~~G~l~~~~g~~~ 360 (393)
T PRK09705 325 AIAGKLVAFMQGIGFI-----------------IAGLAPWFSGVLRSISGNYL 360 (393)
T ss_pred HHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhCCch
Confidence 5789999999999999 99999999999999987 55
No 53
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.31 E-value=0.0012 Score=53.07 Aligned_cols=64 Identities=27% Similarity=0.372 Sum_probs=47.8
Q ss_pred HHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHH
Q psy11630 39 SIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAG 118 (169)
Q Consensus 39 ~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG 118 (169)
..+.++.++++..+..... .+...|..+ ++..+++.|+.+..+.+ |+++++.+.|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~g~~~~~~~~~~~~-----------------g~~~~~~i~g 368 (399)
T TIGR00893 314 AALALVALGFFGLGAGAIG-WALISDNAP-------GNIAGLTGGLINSLGNL-----------------GGIVGPIVIG 368 (399)
T ss_pred HHHHHHHHHHhchhhhhHH-HHHHHhhcC-------hhHHHHHHHHHHHHHHH-----------------hhhhhhHHhh
Confidence 3344445566666544444 456677765 35779999999999999 9999999999
Q ss_pred HhhhccC-Cc
Q psy11630 119 LISDMTG-KS 127 (169)
Q Consensus 119 ~Isd~~G-W~ 127 (169)
++.|.+| |+
T Consensus 369 ~l~~~~g~~~ 378 (399)
T TIGR00893 369 AIAATTGSFA 378 (399)
T ss_pred hhccCCCchh
Confidence 9999998 87
No 54
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.31 E-value=0.0007 Score=59.99 Aligned_cols=78 Identities=12% Similarity=0.052 Sum_probs=57.9
Q ss_pred cCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchh
Q psy11630 32 GATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGI 111 (169)
Q Consensus 32 ~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaa 111 (169)
++.+.+..++..++.|+.......+. .+.-+|..++.+.+..++.-|...|+...+..+ |.+
T Consensus 320 ~~~~~~~~~i~~~l~g~~~~~~~~~~-~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~-----------------~~a 381 (473)
T PRK10429 320 APHNALLIVIAGILLNIGTALFWVLQ-VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG-----------------GSA 381 (473)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH-----------------HHH
Confidence 34444444444445555444444333 467789988888889999999999999988888 999
Q ss_pred hhhhHHHHhhhccCCc
Q psy11630 112 FGGIAAGLISDMTGKS 127 (169)
Q Consensus 112 iggiliG~Isd~~GW~ 127 (169)
+++.+.|++.|..|.+
T Consensus 382 l~~~i~g~~l~~~Gy~ 397 (473)
T PRK10429 382 FAAFFIGVVLGLIGYV 397 (473)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 9999999999988885
No 55
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.29 E-value=0.00078 Score=54.45 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=55.2
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||... .+ ...+.....+.+.+ ..+++...+..++.|+.....+.... ....+.-+ |-.+.
T Consensus 62 ~d~~G~r~~~---~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~--------~~~~~ 126 (377)
T TIGR00890 62 ADKFGPRAVA---ML-GGILYGLGFTFYAI--ADSLAALYLTYGLASAGVGIAYGIAL-NTAVKWFP--------DKRGL 126 (377)
T ss_pred HHHcCccchh---HH-hHHHHHHHHHHHHH--HHHHHHHHHHHHHHhHHHHHHHHhHH-HHHHHHcC--------cccHH
Confidence 3799999776 33 33333333333333 23455555555577776654433222 12222222 12466
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
+.|+......+ |.++++.+.+.+.+.+||+.
T Consensus 127 ~~~~~~~~~~~-----------------g~~~~~~~~~~~~~~~~~~~ 157 (377)
T TIGR00890 127 ASGIIIGGYGL-----------------GSFILSPLITSVINLEGVPA 157 (377)
T ss_pred HHHHHHHhcch-----------------hHhHHHHHHHHHHhcccHHH
Confidence 77777766667 77788888888888889993
No 56
>PRK11043 putative transporter; Provisional
Probab=97.28 E-value=0.0016 Score=55.13 Aligned_cols=96 Identities=14% Similarity=0.084 Sum_probs=54.9
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||.-. +..+.......+...+ ..+++..++..++.|+......... .+...|.-+. +-.+.+
T Consensus 66 dr~g~r~~~----~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~~~~~~~~~~-~~~~~~~~~~-------~~~~~~ 131 (401)
T PRK11043 66 DRYGRKPVL----LAGLSLFALGSLGMLW--VESAAQLLVLRFVQAVGVCSAAVIW-QALVIDRYPA-------QKANRV 131 (401)
T ss_pred hhcCCcHHH----HHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHhhhHHHHHHH-HHHHHHhcCc-------HHHHHH
Confidence 788887544 3333333333333332 2455555555566666543332222 2344555432 223445
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.+++...+.+ |+++++++.|++.+.+||+.
T Consensus 132 ~~~~~~~~~~-----------------~~~~g~~i~~~l~~~~g~~~ 161 (401)
T PRK11043 132 FATIMPLVAL-----------------SPALAPLLGAWLLNHFGWQA 161 (401)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHhcCChHH
Confidence 5666666667 88899999999999999994
No 57
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.27 E-value=0.0015 Score=54.71 Aligned_cols=69 Identities=19% Similarity=0.162 Sum_probs=43.2
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+.+...+..++.|++...-.....+ ...|..+ ++..+++.|+...+..+ |.++|+
T Consensus 310 ~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~-------~~~~g~~~~~~~~~~~~-----------------g~~~gp 364 (408)
T PRK09874 310 TPLQLGILRFLLGAADGALLPAVQT-LLVYNSS-------NQIAGRIFSYNQSFRDI-----------------GNVTGP 364 (408)
T ss_pred cHHHHHHHHHHHHhhhHhhHHHHHH-HHHHhCC-------cccceeeehHHHHHHHH-----------------HHHhhH
Confidence 3444444455666655543333322 2334333 24556677776666666 999999
Q ss_pred hHHHHhhhccCCcH
Q psy11630 115 IAAGLISDMTGKSA 128 (169)
Q Consensus 115 iliG~Isd~~GW~a 128 (169)
++.|++.|.+||+.
T Consensus 365 ~~~G~l~~~~g~~~ 378 (408)
T PRK09874 365 LMGAAISANYGFRA 378 (408)
T ss_pred HHHHHHHhhcchhH
Confidence 99999999999984
No 58
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.27 E-value=0.00072 Score=56.20 Aligned_cols=94 Identities=17% Similarity=0.116 Sum_probs=51.5
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhcC-CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhh
Q psy11630 4 LGLKPPTSRSKVQRVNHYTTELFIYQLLGA-TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVT 82 (169)
Q Consensus 4 ~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~-~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvt 82 (169)
.|||.+. -+.........++...+..+ .+.+....+.++.+ +...-+.....+...|..++ |-.+.+.
T Consensus 53 ~Grr~~~---l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~-~~~~~~~~~~~a~~~~~~~~-------~~r~~~~ 121 (356)
T TIGR00901 53 FGRRRSW---LVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIA-FFSATQDIALDAWRLEILSD-------EELGYGS 121 (356)
T ss_pred CCccHHH---HHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCH-------hhhchHH
Confidence 4776664 33333333333333333322 33433334333444 33343444445567777653 3345566
Q ss_pred hhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC
Q psy11630 83 SIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG 125 (169)
Q Consensus 83 giIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G 125 (169)
|+......+ |.++++.+.+++.+.+|
T Consensus 122 ~~~~~~~~~-----------------G~~~~~~l~~~l~~~~g 147 (356)
T TIGR00901 122 TIYIVGYRA-----------------GMLLSGSLALVLASPEF 147 (356)
T ss_pred HHHHHHHHH-----------------HHHHHHHHHHHHhhhcc
Confidence 666655566 88889999999988888
No 59
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.25 E-value=0.0011 Score=54.46 Aligned_cols=68 Identities=21% Similarity=0.219 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+.+...+..++.|++........ .+...|..++ ..+++.|+.+.++++ |.++++
T Consensus 287 ~~~~~~~~~~~~g~~~g~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~-----------------g~~~g~ 340 (375)
T TIGR00899 287 SLWALLMLQLLNAIFIGILAGIG-MLYFQDLMPG--------RAGAATTLYTNTGRV-----------------GWIIAG 340 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCcc--------hhhHHHHHHHHHHHH-----------------HHHHHH
Confidence 34434444455666655433333 3455666442 235889999998888 999999
Q ss_pred hHHHHhhhccCCcH
Q psy11630 115 IAAGLISDMTGKSA 128 (169)
Q Consensus 115 iliG~Isd~~GW~a 128 (169)
.+.|++.|.+||+.
T Consensus 341 ~~~g~~~~~~g~~~ 354 (375)
T TIGR00899 341 SVGGILAERWSYHA 354 (375)
T ss_pred HHHHHHHHhccchh
Confidence 99999999999983
No 60
>PRK10504 putative transporter; Provisional
Probab=97.23 E-value=0.00082 Score=58.30 Aligned_cols=96 Identities=13% Similarity=0.164 Sum_probs=61.4
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..+.+.....+.+.+ ..+.+..++..++.|+....-.... .+...|.-+ ++-.+++
T Consensus 70 d~~g~r~~~----~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~~~~~~~~~~-~~~~~~~~~-------~~~~~~~ 135 (471)
T PRK10504 70 DRVGVRNIF----FTAIVLFTLGSLFCAL--SGTLNELLLARVLQGVGGAMMVPVG-RLTVMKIVP-------REQYMAA 135 (471)
T ss_pred HHhchHHHH----HHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHhhhHHHHHHH-HHHHHHHcC-------HHHHHHH
Confidence 677777444 3333333333333333 2455555566667777665533333 234556544 2456788
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+....+++ |.++|+.+.|++.|++||+.
T Consensus 136 ~~~~~~~~~~-----------------g~~~g~~~~g~l~~~~gw~~ 165 (471)
T PRK10504 136 MTFVTLPGQV-----------------GPLLGPALGGLLVEYASWHW 165 (471)
T ss_pred HHHHHHHHHH-----------------HHHhhhHHHHHHHhhccHHH
Confidence 8999988888 99999999999999999994
No 61
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.21 E-value=0.0011 Score=57.66 Aligned_cols=96 Identities=16% Similarity=0.164 Sum_probs=62.8
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... ++.........+...+ ..+++...+..++.|+...+-+.... +...|.-++ |-.+.+
T Consensus 80 dr~g~r~~~----~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~~~~~~~~~~~-~~~~~~~~~-------~~r~~~ 145 (496)
T PRK03893 80 DRYGRRLAM----VISIVLFSVGTLACGF--APGYWTLFIARLVIGMGMAGEYGSSA-TYVIESWPK-------HLRNKA 145 (496)
T ss_pred HHhCcHHHH----HHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCH-------HHHHHH
Confidence 677776543 3333333333333332 24566666667788887776555553 456677653 345667
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+......+ |.++++.+.+++.+.+||+.
T Consensus 146 ~~~~~~~~~~-----------------g~~~~~~~~~~l~~~~~w~~ 175 (496)
T PRK03893 146 SGFLISGFSI-----------------GAVVAAQVYSLVVPVWGWRA 175 (496)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHhccCCHHH
Confidence 7777776777 99999999999999999994
No 62
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.20 E-value=0.0015 Score=56.89 Aligned_cols=96 Identities=14% Similarity=0.113 Sum_probs=57.4
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||+.. +..+.......+...+ ..+++..++.-++.|+......... .+...|.-++ +-.+.+
T Consensus 76 dr~Grr~~l----~~~~~~~~~~~~~~~~--a~~~~~l~~~r~l~Gi~~~~~~~~~-~~~~~~~~~~-------~~~~~~ 141 (413)
T PRK15403 76 DRIGRRPVL----ITGALIFTLACAATLF--TTSMTQFLIARFIQGTSICFIATVG-YVTVQEAFGQ-------TKGIKL 141 (413)
T ss_pred HHcCchHHH----HHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCH-------HHHHHH
Confidence 789988755 2233333333333332 3566666666667776553322221 2344455332 345556
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|++.....+ |.++|+++.+++.+++||+.
T Consensus 142 ~~~~~~~~~~-----------------~~~~g~~lg~~l~~~~gw~~ 171 (413)
T PRK15403 142 MAIITSIVLV-----------------APIIGPLSGAALMHFVHWKV 171 (413)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHhcCHHH
Confidence 7777777777 88899998899999899994
No 63
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.18 E-value=0.003 Score=53.64 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=26.8
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
|..+...++...-.++ |.++|+.+.+++.+++||+
T Consensus 129 ~~~~~~~~~~~~g~~l-----------------G~~~g~~~~~~l~~~~gw~ 163 (390)
T TIGR02718 129 RTLAKGNAVQIAGVMI-----------------GFFGGGAGTLVLFGKFGQR 163 (390)
T ss_pred hhhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhCHH
Confidence 4556666666544466 8889999999999999999
No 64
>PRK09848 glucuronide transporter; Provisional
Probab=97.18 E-value=0.00091 Score=58.21 Aligned_cols=91 Identities=15% Similarity=0.104 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccc
Q psy11630 19 NHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTL 98 (169)
Q Consensus 19 ~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~ 98 (169)
.+...+.+.+.+.+..+.+...+.+++.|+-...+.... .+..+|..++++.+..++..|...|+.+..-.+
T Consensus 302 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~-~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl------- 373 (448)
T PRK09848 302 LLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVM-WALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC------- 373 (448)
T ss_pred HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH-------
Confidence 333334444444444555555454556666655555544 456778888777788888889999998888888
Q ss_pred cCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 99 SGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 99 a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
|.++|+.+.|.+.+..|++
T Consensus 374 ----------g~aig~~i~g~~l~~~G~~ 392 (448)
T PRK09848 374 ----------GQAIGGSIPAFILGLSGYI 392 (448)
T ss_pred ----------HHHHHHHHHHHHHHHcCCC
Confidence 9999999999998888874
No 65
>PRK03545 putative arabinose transporter; Provisional
Probab=97.17 E-value=0.0032 Score=53.45 Aligned_cols=70 Identities=19% Similarity=0.090 Sum_probs=44.0
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.+.+..+++.++.|+...+-..... +...|..+ +..+++.|+..+..++ |.++|
T Consensus 292 ~~~~~~~~~~~l~g~~~~~~~~~~~-~~~~~~~~--------~~~~~~~g~~~~~~~~-----------------g~~~G 345 (390)
T PRK03545 292 NSEWHLSVLSIFWGIAIMCIGLAMQ-VKVLKLAP--------DATDVAMALFSGIFNI-----------------GIGAG 345 (390)
T ss_pred chHHHHHHHHHHHHHHHhcchHHHH-HHHHHhCC--------CcHHHHHHHHHHHHHH-----------------HHHHH
Confidence 3444444555566665433211121 23344432 2446778887777777 99999
Q ss_pred hhHHHHhhhccCCcHH
Q psy11630 114 GIAAGLISDMTGKSAS 129 (169)
Q Consensus 114 giliG~Isd~~GW~a~ 129 (169)
+++.|++.|++|++..
T Consensus 346 ~~~~G~~~~~~g~~~~ 361 (390)
T PRK03545 346 ALLGNQVSLHLGLSSI 361 (390)
T ss_pred HHHHHHHHhccChhHH
Confidence 9999999999999943
No 66
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.16 E-value=0.0011 Score=57.64 Aligned_cols=38 Identities=29% Similarity=0.495 Sum_probs=33.9
Q ss_pred cchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC-CcHH
Q psy11630 75 SKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG-KSAS 129 (169)
Q Consensus 75 ~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G-W~a~ 129 (169)
.+..|++.|+.+.++.+ |+++++.++|.+.|.+| |+..
T Consensus 364 ~~~~~~a~g~~~~~~~~-----------------g~~~~p~~~g~i~~~~g~~~~~ 402 (412)
T TIGR02332 364 LQARAIAIAVINATGNI-----------------GSALSPFLIGILKDATGSFNSG 402 (412)
T ss_pred hHHHHHHHHHHHHhhhh-----------------hhhhhhhhcccccccCCCCchh
Confidence 45789999999999999 99999999999999886 8843
No 67
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.13 E-value=0.0024 Score=55.60 Aligned_cols=97 Identities=8% Similarity=0.034 Sum_probs=57.8
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|+|.-. .+..+..++..++..+. ...+....++.-++.|+...+ ..-.......|..++ +-.+.+
T Consensus 101 dr~g~r~~l---~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~~~G~~~~~-~~~~~~~~~~~~~~~-------~~r~~~ 168 (465)
T TIGR00894 101 GKYVFKWSI---GIGMFLSSVISIVIPWA-AGGGIALVVFCRVIQGLAQGS-VSPATHKIIVKWAPP-------KERSRL 168 (465)
T ss_pred HHhCcchhh---HHHHHHHHHHHHHHHHH-HHcCchHHHHHHHHHHHhccc-chhhHHHHHHhcCCH-------HHHHHH
Confidence 678877655 22222222222222111 112344444444566644443 333334456666553 456788
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhcc-CCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMT-GKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~-GW~ 127 (169)
.|+......+ |.++++++.+++.+.+ ||+
T Consensus 169 ~~~~~~~~~~-----------------g~~i~~~l~~~l~~~~~gw~ 198 (465)
T TIGR00894 169 LGMSTSGFQL-----------------GTFIFLPISGWLCESWGGWP 198 (465)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHhccCCCC
Confidence 9999988888 9999999999999984 999
No 68
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.12 E-value=0.0027 Score=50.47 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=64.9
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... ++.........+.+.+. .+.+...+..++.|+.....+... .+...|..++ |-.+++
T Consensus 59 d~~g~r~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~-------~~~~~~ 124 (352)
T cd06174 59 DRFGRRRVL----LLGLLLFALGSLLLAFA--SSLWLLLVGRFLLGLGGGALYPAA-AALIAEWFPP-------KERGRA 124 (352)
T ss_pred HHhCCchhh----HHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHcccccccHhH-HHHHHHhCCc-------cchhhh
Confidence 788888754 44444444444444432 456666666677777655544444 4566777653 456778
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.|+......+ |.++++.+.+.+.|..+|+
T Consensus 125 ~~~~~~~~~~-----------------g~~~~~~~~~~~~~~~~~~ 153 (352)
T cd06174 125 LGLFSAGFGL-----------------GALLGPLLGGLLAESLGWR 153 (352)
T ss_pred hhHHHHHHHH-----------------HHHHHHHHHHHHHHHhhHH
Confidence 8888888888 9999999999999999998
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.12 E-value=0.0016 Score=55.32 Aligned_cols=69 Identities=19% Similarity=0.185 Sum_probs=41.2
Q ss_pred CCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhh
Q psy11630 33 ATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIF 112 (169)
Q Consensus 33 ~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaai 112 (169)
.++.+...+..++.|++...-.... .+.+.|.-++ .+.+-|.....+++ |.++
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~-~a~~~~~~~~---------~~~a~~~~~~~~~l-----------------g~~i 143 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLT-DALANTWQKQ---------IGLDYGKVRLWGSI-----------------AFVI 143 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHH-HHHHHHHHhh---------ccCCcchHHHHHHH-----------------HHHH
Confidence 3556655555555666533222222 3344554221 22334445555677 9999
Q ss_pred hhhHHHHhhhccCCcH
Q psy11630 113 GGIAAGLISDMTGKSA 128 (169)
Q Consensus 113 ggiliG~Isd~~GW~a 128 (169)
|+++.|++.+++||+.
T Consensus 144 gp~lgg~l~~~~g~~~ 159 (382)
T PRK11128 144 GSALTGKLVSWFGEQA 159 (382)
T ss_pred HHHHHHHHHHHcChhH
Confidence 9999999999999994
No 70
>PRK09952 shikimate transporter; Provisional
Probab=97.09 E-value=0.0025 Score=55.80 Aligned_cols=61 Identities=13% Similarity=0.043 Sum_probs=40.8
Q ss_pred HHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhccccc-ccccCccccCCcchhhccchhhhhhHHHHh
Q psy11630 42 LLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGS-IASLSNTLSGDLATVFDIGGIFGGIAAGLI 120 (169)
Q Consensus 42 ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gs-i~~~~~~~a~~LS~~~DvGaaiggiliG~I 120 (169)
.+++.|+....-.... .+...|+-+. +..+++.|+....|+ + |++++++++|++
T Consensus 349 ~~~l~~~~~~~~~~~~-~~~~~e~~p~-------~~r~tg~g~~~~~~~~l-----------------gg~~~p~i~g~l 403 (438)
T PRK09952 349 SIMLANIAHDMVVCVQ-QPMFTEMFGA-------SYRYSGAGVGYQVASVV-----------------GGGFTPFIAAAL 403 (438)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHCCc-------chhHHHHhHHHHHHHHH-----------------HHHHHHHHHHHH
Confidence 3334445444333334 3456677653 467788888877877 6 899999999999
Q ss_pred hhccC--Cc
Q psy11630 121 SDMTG--KS 127 (169)
Q Consensus 121 sd~~G--W~ 127 (169)
.|.++ |.
T Consensus 404 ~~~~~~~~~ 412 (438)
T PRK09952 404 VTYFGGSWH 412 (438)
T ss_pred HHhcCCCch
Confidence 98664 55
No 71
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.08 E-value=0.0026 Score=55.11 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=61.2
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..+.+.....+.+.+. ++++..++..++.|+.. +.......+...|..+ ++-.+.+
T Consensus 71 dr~g~k~~l----~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~~~-~~~~~~~~~~~~~~~~-------~~~~~~a 136 (400)
T PRK11646 71 DRFGAKPMI----VTGMLMRAAGFATMAIA--HEPWLLWLSCILSGLGG-TLFDPPRTALVIKLIR-------PHQRGRF 136 (400)
T ss_pred HHhCchHHH----HHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcC-------HHHHHHH
Confidence 688876554 44555555555555442 45555555555666643 3322222344556654 2467889
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+.....++ |.++|+.+.|++. .+||+.
T Consensus 137 ~~~~~~~~~~-----------------g~~ig~~l~g~l~-~~g~~~ 165 (400)
T PRK11646 137 FSLLMMQDSA-----------------GAVIGALLGSWLL-QYDFRL 165 (400)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHH-HhhHHH
Confidence 9999999999 9999999999999 579984
No 72
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.05 E-value=0.002 Score=56.98 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=48.8
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.+.+..++..++.|+....-.... .+...|..++ +-.+++.|++.....+ |+++|
T Consensus 331 ~~~~~~~i~~~~~G~~~g~~~~~~-~~~~~~~~~~-------~~~g~~~g~~~~~~~l-----------------g~~ig 385 (455)
T TIGR00892 331 GDYTGLVIYCIFFGLSFGSVGALL-FEVLMDLVGA-------QRFSSAVGLVTIVECC-----------------AVLIG 385 (455)
T ss_pred chHHHHHHHHHHHHHHhchHHHHH-HHHHHHHhhH-------HHHhhHHhHHHHHHHH-----------------HHHcc
Confidence 345544555566777554443333 3466676553 4678889999988888 99999
Q ss_pred hhHHHHhhhccC-Cc
Q psy11630 114 GIAAGLISDMTG-KS 127 (169)
Q Consensus 114 giliG~Isd~~G-W~ 127 (169)
+++.|++.|.+| |+
T Consensus 386 p~i~G~l~~~~g~~~ 400 (455)
T TIGR00892 386 PPLAGRLVDATKNYK 400 (455)
T ss_pred ccceeeeehhcCCcc
Confidence 999999999885 87
No 73
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.03 E-value=0.0042 Score=54.40 Aligned_cols=98 Identities=11% Similarity=0.063 Sum_probs=54.9
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhc--CCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLG--ATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKAL 78 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~--~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~ 78 (169)
.||.|+|... ++...+.....+.+.+.+ ..+.+..+++.++.|++...-+.... ....|.-+ ++-.
T Consensus 87 ~Dr~g~k~~l----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~-~~~~~~~~-------~~~r 154 (452)
T PRK11273 87 SDRSNPRVFL----PAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCG-RTMVHWWS-------QKER 154 (452)
T ss_pred hhccCCchhH----HHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHH-HHHHHhCC-------hHHH
Confidence 4788888654 333333333333443322 23455666667788887655444333 34455544 3457
Q ss_pred hhhhhhhcccccccccCccccCCcchhhccchhhhhhHHH-HhhhccCCc
Q psy11630 79 ATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAG-LISDMTGKS 127 (169)
Q Consensus 79 atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG-~Isd~~GW~ 127 (169)
+++.|+.+..+.+ |+.+.+.+.+ .+....||+
T Consensus 155 ~~~~~~~~~~~~~-----------------g~~~~~~l~~~~~~~~~gw~ 187 (452)
T PRK11273 155 GGIVSVWNCAHNV-----------------GGGLPPLLFLLGMAWFNDWH 187 (452)
T ss_pred HHHHHHHHHHHHh-----------------hhhHHHHHHHHHHHHhccHH
Confidence 7888888777777 7655444432 333345898
No 74
>PRK15075 citrate-proton symporter; Provisional
Probab=97.02 E-value=0.0025 Score=55.44 Aligned_cols=45 Identities=16% Similarity=0.091 Sum_probs=32.4
Q ss_pred HHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 60 AVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 60 a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+...|..++ +-.+++.|+...+|.. +++.+++.+.|++.|++|++
T Consensus 354 ~~~~e~~p~-------~~rg~~~g~~~~~~~~----------------~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 354 VALTEVMPA-------EVRTAGFSLAYSLATA----------------IFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHCCC-------CccchheeHHHHHHHH----------------HHhhhHHHHHHHHHHhcCCc
Confidence 345676553 3457778887777765 15778999999999999964
No 75
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.02 E-value=0.0041 Score=54.13 Aligned_cols=69 Identities=17% Similarity=-0.045 Sum_probs=47.1
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.+....++.-++.|+... ..... .+...|.-+ +|-.+++.|+......+ |++++
T Consensus 77 ~~~~~l~~~R~l~G~g~~-~~~~~-~~~~~~~~~-------~~~r~~a~~~~~~~~~l-----------------G~~l~ 130 (368)
T TIGR00903 77 FNYEWLLACQLLAALGQP-FLLNA-FAPAASQIR-------EERRDLVISLLSFAMYL-----------------GIIFA 130 (368)
T ss_pred ccHHHHHHHHHHHHhHhH-HHHHH-HHHHHHHcC-------HHHHHHHHHHHHHHHHH-----------------HHHHH
Confidence 356666666667776653 22222 222344433 35677888888887788 99999
Q ss_pred hhHHHHhhhccCCcH
Q psy11630 114 GIAAGLISDMTGKSA 128 (169)
Q Consensus 114 giliG~Isd~~GW~a 128 (169)
+++.+++.+.+|||.
T Consensus 131 ~~~~~~l~~~~gWr~ 145 (368)
T TIGR00903 131 LAAGLKIYTAGGLQL 145 (368)
T ss_pred HHHHHHHHHccchHH
Confidence 999999999999993
No 76
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.01 E-value=0.0014 Score=59.02 Aligned_cols=44 Identities=20% Similarity=0.308 Sum_probs=35.8
Q ss_pred HHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 60 AVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 60 a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+...++.++ +-.+|..|+.+..+.+ |+++++.+.|++.|.+||+
T Consensus 339 a~~~~l~~~-------~~~~t~~gl~~s~~~l-----------------g~~~~~~~~G~l~~~~G~~ 382 (491)
T PRK11010 339 ALLMTLCNK-------SFSATQFALLSALSAV-----------------GRVYVGPVAGWFVEAHGWP 382 (491)
T ss_pred HHHHHHcCC-------CCcHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhChH
Confidence 355666653 3557888999888888 9999999999999999998
No 77
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=96.99 E-value=0.0039 Score=53.06 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=53.1
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... .+.........+.... ..+.+...+.-++.|+....-.... .+...|.-++ +-.+.+
T Consensus 73 dr~g~r~~l----~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~~~~~~~~~~-~~~i~~~~~~-------~~~~~~ 138 (406)
T PRK15402 73 DRIGRRPVM----LAGVAFFILTCLAILL--AQSIEQFTLLRFLQGIGLCFIGAVG-YAAIQESFEE-------ADAIKI 138 (406)
T ss_pred HHhCChHHH----HHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHhHhhhHHHHH-HHHHHHHhCh-------hHHHHH
Confidence 788887654 2233333333333332 2345544455555565433222222 2334455432 233455
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+....+.+ |..+++.+.+++.+.+||+.
T Consensus 139 ~~~~~~~~~~-----------------~~~~g~~i~~~l~~~~~w~~ 168 (406)
T PRK15402 139 TALMANVALL-----------------APLLGPLVGAALIHVLPWRG 168 (406)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHccCccH
Confidence 5666666667 78889999999999999993
No 78
>PRK12382 putative transporter; Provisional
Probab=96.99 E-value=0.0041 Score=52.50 Aligned_cols=96 Identities=15% Similarity=0.067 Sum_probs=57.6
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
+|.|+|.- .+..........+.+.+. .+.+...+..++.|+....-+.... +..+|..+ ++-.+++
T Consensus 274 ~r~g~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~-~~~~~~~~-------~~~~g~~ 339 (392)
T PRK12382 274 DRFGGVKV----AIVSLLVETVGLLLLWLA--PTAWVALAGAALTGAGCSLIFPALG-VEVVKRVP-------SQVRGTA 339 (392)
T ss_pred HhcCCCee----hHHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHHhHHHHHH-HHHHHhcC-------HHHHHHH
Confidence 45555422 344444444444444332 3344444445556655443222222 23344433 4578999
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.|+.+...++ |+++++.+.|++.|++||+.
T Consensus 340 ~g~~~~~~~~-----------------g~~ig~~~~g~l~~~~g~~~ 369 (392)
T PRK12382 340 LGGYAAFQDI-----------------AYGVSGPLAGMLATSFGYPS 369 (392)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHHhCchH
Confidence 9999988888 99999999999999999994
No 79
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=96.99 E-value=0.0018 Score=56.27 Aligned_cols=62 Identities=16% Similarity=0.094 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhh
Q psy11630 36 LTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGI 115 (169)
Q Consensus 36 ~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggi 115 (169)
......++++.|++..+++.... +..+|+.++ +..||+.|++++.|.+ |++++++
T Consensus 280 ~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~p~-------~~rgt~~G~~~~~g~~-----------------~~~~~~~ 334 (368)
T TIGR00903 280 RLALFAFIGIAGLLMLPAYAIIM-DWIGKFCDK-------ELHGKAAGAIGFTSRA-----------------ISVALAL 334 (368)
T ss_pred cHHHHHHHHHHHHhhhhhHHHHH-HHHHHhcch-------hhcCcccchhhHHHHH-----------------HHHHHHH
Confidence 33445566778888888888764 678899874 6899999999999999 9999999
Q ss_pred HHHHhhh
Q psy11630 116 AAGLISD 122 (169)
Q Consensus 116 liG~Isd 122 (169)
+.|.+..
T Consensus 335 ~~~~~~~ 341 (368)
T TIGR00903 335 AAMLFIS 341 (368)
T ss_pred HHHHHhc
Confidence 9987773
No 80
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.98 E-value=0.0018 Score=55.35 Aligned_cols=36 Identities=22% Similarity=0.389 Sum_probs=31.2
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcHH
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSAS 129 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~ 129 (169)
..+++.|+.+.+.++ |+++++.+.|++.|++||+..
T Consensus 337 ~~g~~~~~~~~~~~l-----------------g~~~g~~l~G~i~~~~g~~~~ 372 (393)
T PRK15011 337 QAGSATTLYTNTSRV-----------------GWIIAGSLAGIVAEIWNYHAV 372 (393)
T ss_pred CcchHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhHHH
Confidence 368888888888788 999999999999999999843
No 81
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=96.97 E-value=0.0044 Score=50.99 Aligned_cols=91 Identities=18% Similarity=0.191 Sum_probs=51.0
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||... . +.........+...+.+. +++...+..++.|+. .+.+.. ..+...|..++ +-.+.
T Consensus 61 ~dr~g~r~~~---~-~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~g~~-~~~~~~-~~~~~~~~~~~-------~~r~~ 126 (366)
T TIGR00886 61 VDKFGPRYTT---T-LSLLLLAIPCLWAGLAVQ-SYSVLLLLRLFIGIA-GGSFAS-CMPWISFFFPK-------KIQGT 126 (366)
T ss_pred HHHhCchHHH---H-HHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHh-chhhHh-HHHHHHHhcCH-------hhhhH
Confidence 3788888665 2 233333333333333211 555555555667765 444433 23455566542 34567
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
+.|+....+++ |.++++.+.+.+..
T Consensus 127 ~~~~~~~~~~~-----------------g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 127 ALGLAAGWGNM-----------------GGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHhHH-----------------HHHHHHHHHHHHHH
Confidence 77887777777 77777777776654
No 82
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.97 E-value=0.0021 Score=56.34 Aligned_cols=62 Identities=10% Similarity=0.212 Sum_probs=40.9
Q ss_pred HHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcc-cccccccCccccCCcchhhccchhhhhhHHHH
Q psy11630 41 VLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDG-TGSIASLSNTLSGDLATVFDIGGIFGGIAAGL 119 (169)
Q Consensus 41 ~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg-~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~ 119 (169)
+..++.|+... ..+........|..+ ++..+++.|+.+. ...+ |+++|+++.|+
T Consensus 313 l~~~l~g~~~~-~~~~~~~~~i~~~~p-------~~~~g~~~g~~~~~~~~l-----------------g~~iGp~l~G~ 367 (418)
T TIGR00889 313 LSMIVYGCAFD-FFNISGSVFVEKEVP-------VHIRASAQGLFTLMCNGF-----------------GSLLGYILSGV 367 (418)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHhh-----------------HHHHHHHHHHH
Confidence 33445555432 222222334555554 4688999999974 4567 99999999999
Q ss_pred hhhcc------CCc
Q psy11630 120 ISDMT------GKS 127 (169)
Q Consensus 120 Isd~~------GW~ 127 (169)
+.|++ ||+
T Consensus 368 l~~~~g~~~~~~~~ 381 (418)
T TIGR00889 368 MVEKMFAYGTFDWQ 381 (418)
T ss_pred HHHHhccccCCchH
Confidence 99984 587
No 83
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.97 E-value=0.0016 Score=60.69 Aligned_cols=94 Identities=16% Similarity=0.084 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccC
Q psy11630 16 QRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLS 95 (169)
Q Consensus 16 ~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~ 95 (169)
+.....+.+-++++++++++.++.++..++.++...-+..+.. +.-.|..++++.+..+|..|...|+..++.-+
T Consensus 307 ~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~w-am~~d~vDyge~~TG~R~eGi~~s~~tF~~K~---- 381 (467)
T COG2211 307 IGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPW-AMVADTVDYGEWKTGVRREGIVYSGMTFFRKL---- 381 (467)
T ss_pred HHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccH-HHhcchhhHHHHHhCCCchhhHHHHHHHHHHH----
Confidence 3344455555566666777777666666666666666666665 68899999999999999999999999999999
Q ss_pred ccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 96 NTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 96 ~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
|.++++.++|++.+.+|..
T Consensus 382 -------------g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 382 -------------GLALAGFIPGWILGAIGYV 400 (467)
T ss_pred -------------HHHHHHHHHHHHHHHcCCC
Confidence 9999999999999988876
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.92 E-value=0.0023 Score=52.12 Aligned_cols=70 Identities=24% Similarity=0.117 Sum_probs=42.2
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhccccc-ccccCccccCCcchhhccchhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGS-IASLSNTLSGDLATVFDIGGIF 112 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gs-i~~~~~~~a~~LS~~~DvGaai 112 (169)
.+.+.....+++.|++...-+... .+...|..++ +..+++.|+...++. + |+++
T Consensus 310 ~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~-------~~~~~~~~~~~~~~~~~-----------------g~~~ 364 (394)
T TIGR00883 310 GSFTLFFFLVLGLALIGGMYTGPM-GSFLPELFPT-------EVRYTGASLAYNLAGAI-----------------FGGF 364 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHhhhH-HHHHHHhCCc-------cceeeEeeehhHhHHHH-----------------HhhH
Confidence 344444444455565544333333 4566677553 234556666544443 4 7778
Q ss_pred hhhHHHHhhhccC-CcH
Q psy11630 113 GGIAAGLISDMTG-KSA 128 (169)
Q Consensus 113 ggiliG~Isd~~G-W~a 128 (169)
++.+.|++.|++| |+.
T Consensus 365 ~p~~~g~l~~~~g~~~~ 381 (394)
T TIGR00883 365 APYIAAALVAMTGDWYA 381 (394)
T ss_pred HHHHHHHHHHHcCcchh
Confidence 9999999999998 774
No 85
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=96.91 E-value=0.0028 Score=55.06 Aligned_cols=96 Identities=15% Similarity=0.004 Sum_probs=59.4
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..+++.....+...+ .++.+..++.-++.|+...+-+... .+...|.-++ |-.+.+
T Consensus 68 dr~G~r~~~----~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~-------~~rg~~ 133 (412)
T TIGR02332 68 AIIGARRWI----AGIMVLWGIASTATMF--ATGPESLYLLRILVGIAEAGFLPGI-LLYLTFWFPA-------YFRARA 133 (412)
T ss_pred HHhChHHHH----HHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHcCH-------HHHHHH
Confidence 677877644 3333333333333332 3455555555667888776643322 2345666553 456778
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh------ccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD------MTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd------~~GW~a 128 (169)
.|+......+ |.++++.+.+++.+ .+|||.
T Consensus 134 ~~~~~~~~~~-----------------g~~~~~~~~~~l~~~~~~~~~~gwr~ 169 (412)
T TIGR02332 134 NALFMIAMPV-----------------TMALGLILSGYILALDGLMALKGWQW 169 (412)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHhCCCCCCccchhH
Confidence 8888877777 99999999998874 479994
No 86
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=96.91 E-value=0.0035 Score=57.68 Aligned_cols=97 Identities=24% Similarity=0.241 Sum_probs=67.1
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhh
Q psy11630 3 RLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVT 82 (169)
Q Consensus 3 ~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvt 82 (169)
|...+.|. .+..+......++.+++.|....++- ++++|+-.++-..+-=+-+..+. .|.+.+|.-+
T Consensus 269 R~~n~r~~---~~~~~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~F~laL~li~~rs-------~~a~~Aa~LS 335 (395)
T COG2807 269 RSKNQRPL---VVLALLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGAFPLALTLILLRS-------SDAAIAAALS 335 (395)
T ss_pred HhcccchH---HHHHHHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchHHHHHHHHHHhhc-------CChHHHHHHH
Confidence 33444444 56666777777888877666655444 35667666665444322233333 3467889999
Q ss_pred hhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC-CcHH
Q psy11630 83 SIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG-KSAS 129 (169)
Q Consensus 83 giIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G-W~a~ 129 (169)
|+..+.||+ =|++|+++.|++-|.+| |++.
T Consensus 336 gmaQg~GYl-----------------lAa~GP~l~G~lhDa~gsw~~~ 366 (395)
T COG2807 336 GMAQGVGYL-----------------LAAFGPWLFGFLHDATGSWSAP 366 (395)
T ss_pred HHhhhhhHH-----------------HHhhhhhhHhHHHHhcCChHHH
Confidence 999999999 89999999999999997 7743
No 87
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=96.89 E-value=0.0039 Score=53.78 Aligned_cols=44 Identities=9% Similarity=0.022 Sum_probs=30.6
Q ss_pred HHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh------hccCCc
Q psy11630 60 AVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS------DMTGKS 127 (169)
Q Consensus 60 a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is------d~~GW~ 127 (169)
+...|+-++ +--+++.|+....+.+ |+++++.+.+.+. |.+||.
T Consensus 387 ~~~~e~~p~-------~~r~~~~g~~~~~~~~-----------------g~~~~~~~~p~~~~~~~~~~~~~~~ 436 (479)
T PRK10077 387 VLLSEIFPN-------AIRGKALAIAVAAQWI-----------------ANYFVSWTFPMMDKNSWLVAHFHNG 436 (479)
T ss_pred HHhHhhCCh-------hHHHHHHHHHHHHHHH-----------------HHHHHHHHhHHHHhccchhhhccCc
Confidence 345666442 4678888888888888 8888766666444 677877
No 88
>PRK09952 shikimate transporter; Provisional
Probab=96.87 E-value=0.0046 Score=54.19 Aligned_cols=96 Identities=22% Similarity=0.169 Sum_probs=53.9
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHH--------HHHHHHHHHhhhhcchHHHHHHHHhhhccccccccC
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLT--------MSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEG 73 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~--------~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~ 73 (169)
||.|||... +..+.......+...+. +++. ..+++-++.|+...+.+.... +...|..+++
T Consensus 89 Dr~Grr~~l----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~-~~~~e~~p~~---- 157 (438)
T PRK09952 89 DRLGRKRML----MLTVWMMGIATALIGLL--PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAA-LLAVESAPKN---- 157 (438)
T ss_pred HhhccHHHH----HHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHH-HHHHHhCCCC----
Confidence 788888765 33344433333333332 2222 234444688998888766553 4666776542
Q ss_pred CcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh--------hccCCcH
Q psy11630 74 NSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS--------DMTGKSA 128 (169)
Q Consensus 74 n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is--------d~~GW~a 128 (169)
+| +.+.+.......+ |..+++.+.+++. +.+|||.
T Consensus 158 -~r--g~~~~~~~~g~~~-----------------G~~l~~~~~~~l~~~~~~~~~~~~gWr~ 200 (438)
T PRK09952 158 -KK--AFYSSGVQVGYGV-----------------GLLLSTGLVSLISMMTTDEQFLSWGWRI 200 (438)
T ss_pred -CC--cHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHhCCHHHhhccChHH
Confidence 33 4555555544445 6666666666554 3579994
No 89
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.84 E-value=0.0032 Score=56.06 Aligned_cols=51 Identities=22% Similarity=0.231 Sum_probs=39.5
Q ss_pred hhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc
Q psy11630 48 SLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM 123 (169)
Q Consensus 48 ffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~ 123 (169)
++..|+..+.. +...|+-+ .+.-+++.|+.+.++.+ |+++++.+.|++.|.
T Consensus 404 ~~~~~~~~~~~-~~~~E~~p-------~~~R~~~~g~~~~~~~~-----------------~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 404 FANFGPNATTF-IVPGEVFP-------TRYRSTAHGISAASGKA-----------------GAIIGQFGFLYLAQH 454 (502)
T ss_pred HHhcCCCchhh-hhhhccCc-------hhHHHHHHHHHHHHhhh-----------------HHHHHHHHhhhhhcc
Confidence 33455555443 45678866 46889999999999999 999999999999884
No 90
>PRK10091 MFS transport protein AraJ; Provisional
Probab=96.83 E-value=0.0038 Score=53.11 Aligned_cols=97 Identities=12% Similarity=0.048 Sum_probs=56.8
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
+||.|||+-. ++.+.......+...+ .++++...+..++.|+....-.... .+...|..+++ -.+.
T Consensus 62 ~dr~g~r~~~----~~~~~~~~~~~~l~~~--~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~-------~~~~ 127 (382)
T PRK10091 62 SSRYSLKHIL----LFLVALCVIGNAMFTL--SSSYLMLAIGRLVSGFPHGAFFGVG-AIVLSKIIKPG-------KVTA 127 (382)
T ss_pred HccCccHHHH----HHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHhhhHHHHHHH-HHHHHHhCChH-------HhhH
Confidence 3788877655 3333333333333332 3566666666677777655433222 34455654432 2334
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
+.|+......+ |..+++.+.+++.+.+||+.
T Consensus 128 ~~~~~~~~~~~-----------------g~~~g~~l~~~l~~~~gwr~ 158 (382)
T PRK10091 128 AVAGMVSGMTV-----------------ANLLGIPLGTYLSQEFSWRY 158 (382)
T ss_pred HHHHHHHHHHH-----------------HHHHhccHHHHHhhhccHHH
Confidence 55555555556 88888999999999999993
No 91
>PRK10489 enterobactin exporter EntS; Provisional
Probab=96.82 E-value=0.0049 Score=52.78 Aligned_cols=99 Identities=18% Similarity=0.090 Sum_probs=54.1
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHH-H-HhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFI-Y-QLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKAL 78 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~-y-~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~ 78 (169)
.||.|||... .+..+...+..+.. . .+....+++...+..++.|++...-.... .+...|..++ +-.
T Consensus 76 ~dr~g~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~-~~~~~~~~~~-------~~~ 144 (417)
T PRK10489 76 ADRYDRKKLI---LLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTAL-LAATPALVGR-------ENL 144 (417)
T ss_pred hhhcCCceEE---EehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH-hhhhhhccCH-------HHH
Confidence 3788888766 22221111111111 1 11233455555555556665432211111 2234455432 345
Q ss_pred hhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 79 ATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 79 atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+.+.|+....+++ |.++|+.+.|++.+..||+
T Consensus 145 ~~~~~~~~~~~~~-----------------g~~~g~~l~g~l~~~~~~~ 176 (417)
T PRK10489 145 MQAGAITMLTVRL-----------------GSVISPALGGLLIAAGGVA 176 (417)
T ss_pred HHHHHHHHHHHhH-----------------HHHhHHHHHHHHHHHHhhH
Confidence 6677777777777 8889999999999988887
No 92
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=96.80 E-value=0.0042 Score=52.99 Aligned_cols=69 Identities=14% Similarity=0.111 Sum_probs=43.4
Q ss_pred CCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhh
Q psy11630 33 ATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIF 112 (169)
Q Consensus 33 ~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaai 112 (169)
.++.+...+..++.|++...-..+. .+.+.|- ++-.+.+-|.+...|++ |.++
T Consensus 91 ~~~~~~l~~~~~l~~~~~~~~~p~~-~al~~~~---------~~~~~~~~g~~~~~~sl-----------------G~~~ 143 (382)
T TIGR00902 91 AHNAWLLFIAIGLFALFFSAGMPIG-DALANTW---------QKQFGLDYGKVRLIGSA-----------------AFII 143 (382)
T ss_pred hhhHHHHHHHHHHHHHHHccchhHH-HHHHHHH---------HHHcCCCccHHHHHHHH-----------------HHHH
Confidence 3456555444445565544322222 2333332 12234567788888889 9999
Q ss_pred hhhHHHHhhhccCCcH
Q psy11630 113 GGIAAGLISDMTGKSA 128 (169)
Q Consensus 113 ggiliG~Isd~~GW~a 128 (169)
++++.|++.+++||+.
T Consensus 144 g~~l~g~l~~~~g~~~ 159 (382)
T TIGR00902 144 GSALFGGLIGMFDEQN 159 (382)
T ss_pred HHHHHHHHHHHcChhH
Confidence 9999999999999994
No 93
>PRK15075 citrate-proton symporter; Provisional
Probab=96.79 E-value=0.0047 Score=53.72 Aligned_cols=98 Identities=13% Similarity=0.151 Sum_probs=52.2
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHH--------HHHHHHHHHhhhhcchHHHHHHHHhhhcccccccc
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLT--------MSIVLLLLLGSLVNGPYALITTAVSAELGTHECLE 72 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~--------~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~ 72 (169)
.||.|||... +..+.+.....+..-+. .++. ..++.-++.|+...+-.... .+...|..++
T Consensus 80 ~Dr~Grr~~l----~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~~~e~~p~---- 148 (434)
T PRK15075 80 IDRVGRRKGL----IVTLSIMASGTLLIAFV--PGYATIGLAAPLLVLLGRLLQGFSAGVELGGV-SVYLAEIATP---- 148 (434)
T ss_pred hhhhchHHHH----HHHHHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHhhccccccHHHH-HHHHHhhCCc----
Confidence 3788888765 33333333333333332 2322 12334456777665543333 2456677653
Q ss_pred CCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHh--------hhccCCcHH
Q psy11630 73 GNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLI--------SDMTGKSAS 129 (169)
Q Consensus 73 ~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~I--------sd~~GW~a~ 129 (169)
+..+.+.|+.....++ |.++++.+.+.+ .+.+|||..
T Consensus 149 ---~~rg~~~~~~~~~~~~-----------------g~~~g~~~g~~l~~~~~~~~~~~~gWr~~ 193 (434)
T PRK15075 149 ---GRKGFYTSWQSASQQV-----------------AVVFAALLGYLLNQWLSPAQMAEWGWRIP 193 (434)
T ss_pred ---ccchHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHhCCHHHHhccchHHH
Confidence 3456777777766666 555555544443 356899943
No 94
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=96.79 E-value=0.0073 Score=51.36 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=21.7
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh-------hccCCcH
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS-------DMTGKSA 128 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is-------d~~GW~a 128 (169)
--+.+.++....+++ |+.+++++.+.+. +..||+.
T Consensus 133 ~R~~~~~~~~~~~~~-----------------g~~l~~~~~~~l~~~~~~~~~~~g~~~ 174 (437)
T TIGR00792 133 ERESLSTFRRFGATL-----------------GGLLVAVIVLPLVSYFGGGDDKFGWFM 174 (437)
T ss_pred HHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhCCCcccccHHH
Confidence 344566777777777 7767666555443 3467883
No 95
>PRK12382 putative transporter; Provisional
Probab=96.78 E-value=0.0037 Score=52.79 Aligned_cols=23 Identities=17% Similarity=-0.008 Sum_probs=19.1
Q ss_pred chhhhhhHHHHhhhccCCcHHHH
Q psy11630 109 GGIFGGIAAGLISDMTGKSASVC 131 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~a~~c 131 (169)
|.++|+.+.+++.+.+||+...+
T Consensus 160 g~~~g~~~~~~l~~~~g~~~~~~ 182 (392)
T PRK12382 160 ALAAGAPLGLLLHSHFGFAALAL 182 (392)
T ss_pred HHHHHHHHHHHHHhccChHHHHH
Confidence 77789999999999999996443
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=96.77 E-value=0.0034 Score=56.87 Aligned_cols=32 Identities=19% Similarity=0.177 Sum_probs=26.7
Q ss_pred hhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 80 TVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 80 tvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.+.++......+ |+++|+++.|++.|++||+.
T Consensus 150 ~~~~~~~~~~~i-----------------G~~~gp~i~g~l~~~~g~~~ 181 (500)
T PRK09584 150 GAFTMYYMSINI-----------------GSFFSMLATPWLAAKYGWSV 181 (500)
T ss_pred hcchHHHHHHHH-----------------HHHHHHHHHHHHHHhhCHHH
Confidence 355666777777 99999999999999999994
No 97
>KOG0255|consensus
Probab=96.74 E-value=0.0037 Score=55.63 Aligned_cols=92 Identities=22% Similarity=0.210 Sum_probs=62.7
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||+.. -+- ..+..++.....-+.+++..+++-++.||+..|++.... ....|+... |--+.+
T Consensus 143 D~~GRk~~~---~~~---~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~-~~~~E~~~~-------~~R~~~ 208 (521)
T KOG0255|consen 143 DRFGRKPVL---LVS---LLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGF-GLVAEIVSP-------KQRGLA 208 (521)
T ss_pred hhcccHHHH---HHH---HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhH-hhheeecCc-------chhhHH
Confidence 688988766 222 222222223323357788888999999999999998886 567888653 344555
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
..+ -.+-.. |+.++..+++++.. +||
T Consensus 209 ~~~-~~~~~~-----------------~~~~~~~~~a~~~~--~Wr 234 (521)
T KOG0255|consen 209 LTL-GGFFFV-----------------GGLMLPAGAAYITR--DWR 234 (521)
T ss_pred HHH-HHHHHH-----------------HHHHHHHHHHHHHh--hHH
Confidence 555 445555 77788888899888 788
No 98
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.74 E-value=0.0056 Score=49.83 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=48.3
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcH------HHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCC
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSL------TMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGN 74 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~------~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n 74 (169)
.||.|||... +..+.+.....++..+.+.... ...++.-++.|+...+-.... .+...|..++
T Consensus 59 ~dr~g~r~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~-~~~~~~~~~~------ 127 (394)
T TIGR00883 59 GDRIGRKKTL----VITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGA-ALYLAEYAPP------ 127 (394)
T ss_pred hhhhhhHHHH----HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhcccccccc-HHHhhhcCCc------
Confidence 3788887655 3333333334344433222110 122333345555433222222 2344555442
Q ss_pred cchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh--------hccCCcH
Q psy11630 75 SKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS--------DMTGKSA 128 (169)
Q Consensus 75 ~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is--------d~~GW~a 128 (169)
+..+.+.++......+ |.++++++.+.+. +.+||+.
T Consensus 128 -~~r~~~~~~~~~~~~~-----------------G~~i~~~~~~~~~~~~~~~~~~~~~w~~ 171 (394)
T TIGR00883 128 -GKRGFYGSFQQVGAPV-----------------GLLLAALTVLLLSYLLGDDALLEWGWRI 171 (394)
T ss_pred -ccchHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHhcCHHHhhccchHH
Confidence 2335666666655566 7777777666554 3578984
No 99
>PF13347 MFS_2: MFS/sugar transport protein
Probab=96.74 E-value=0.0033 Score=54.57 Aligned_cols=104 Identities=18% Similarity=0.192 Sum_probs=78.4
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
+|+|+|.-. ...........+.+++.+.++.+...+..++.|+...+-. .+..+.-+|+.++++.|.+++.-|+.
T Consensus 285 ~r~gk~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~-~~~~a~~ad~id~~e~~tg~r~~g~~ 359 (428)
T PF13347_consen 285 KRFGKKKVY----IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFF-VIPWAMLADVIDYDEWKTGRRREGMY 359 (428)
T ss_pred HHccceeeh----hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccc-cccccccccchhhHHHhcCCCchHHH
Confidence 466666544 4444455555555565554667766676777777665544 44467889999999999999999999
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.|+-+.+-.+ |.++++.+.|.+.+..|.+
T Consensus 360 ~s~~~~~~k~-----------------~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 360 FSVNSFFIKI-----------------GQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHhhhhhhHH-----------------HHHHHHHHHHHHHHHhCcC
Confidence 9999999889 9999999999999988876
No 100
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=96.74 E-value=0.0057 Score=48.65 Aligned_cols=69 Identities=32% Similarity=0.522 Sum_probs=52.4
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+.+...+..++.|+...+-..... +...|..+ ++-.+++.|+.+...++ |..+++
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~-----------------~~~i~~ 318 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALL-TLASELAP-------PEARGTASGLFNTFGSL-----------------GGALGP 318 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHH-HHHHhhcC-------HHHHHHHHHHHHHHHHH-----------------HHHHHH
Confidence 355555666677777766555553 45666655 35779999999999999 999999
Q ss_pred hHHHHhhhccCCcH
Q psy11630 115 IAAGLISDMTGKSA 128 (169)
Q Consensus 115 iliG~Isd~~GW~a 128 (169)
.+.|.+.|..||+.
T Consensus 319 ~i~g~l~~~~~~~~ 332 (352)
T cd06174 319 LLAGLLLDTGGYGG 332 (352)
T ss_pred HHHHHHhcccCcch
Confidence 99999999899983
No 101
>PRK10504 putative transporter; Provisional
Probab=96.73 E-value=0.0056 Score=53.13 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=27.5
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+..+++.|+.+....+ |.++|+.+.|.+.+..|..
T Consensus 385 ~~~g~~~~~~~~~~~~-----------------g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 385 NLASSGNSLLSMIMQL-----------------SMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HhccchHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhh
Confidence 4677778887777777 9999999999998877653
No 102
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.67 E-value=0.012 Score=49.73 Aligned_cols=35 Identities=14% Similarity=-0.060 Sum_probs=27.7
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
-.+.+.|+.....++ |.++|+.+.+++.+.+||+.
T Consensus 145 ~r~~~~~~~~~~~~~-----------------g~~~g~~l~~~l~~~~g~~~ 179 (399)
T PRK05122 145 HTGRVISWNGIATYG-----------------ALAIGAPLGVLLYHWGGLAG 179 (399)
T ss_pred hhccchhhhhhhhhH-----------------HHHHHHHHHHHHHHcccHHH
Confidence 345667777666667 88889999999999999994
No 103
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=96.66 E-value=0.0082 Score=53.53 Aligned_cols=94 Identities=17% Similarity=0.137 Sum_probs=54.3
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... ...+++.....+...+ ..+++...+..++.|+...+. ... .....|.-+ ++-.+.+
T Consensus 96 dr~G~r~~~----~~~~~~~~~~~~~~~~--~~s~~~l~~~r~l~G~~~~~~-~~~-~~~i~~~~~-------~~~rg~a 160 (476)
T PLN00028 96 DLYGPRYGS----AFLLMLTAPAVFCMSL--VSSATGFIAVRFFIGFSLATF-VSC-QYWMSTMFN-------GKIVGTA 160 (476)
T ss_pred HHhCChHHH----HHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHhh-HHH-HHHHHHhcC-------hhheeHH
Confidence 688888544 3333333333333332 245555555566788776542 211 223345543 3467788
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh---------ccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD---------MTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd---------~~GW~ 127 (169)
.|+.+..+.+ |+++++.+.+.+.+ .+|||
T Consensus 161 ~g~~~~~~~~-----------------g~~~~~~~~~~i~~~~~~~~~~~~~gWr 198 (476)
T PLN00028 161 NGIAAGWGNL-----------------GGGVTQLLMPLVFPLIKDAGAPSFTAWR 198 (476)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHhcCCcchhhhH
Confidence 8998888888 88888777766532 25898
No 104
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=96.64 E-value=0.0033 Score=61.06 Aligned_cols=93 Identities=19% Similarity=0.139 Sum_probs=62.0
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... .+ .+++.....++..+ ..+++..++.-++.|+.+.+...+. .+...|..+ ++..+.+
T Consensus 227 DR~GRR~~l---ii-~lil~~i~~ll~af--a~s~~~llv~R~l~G~g~g~~~p~~-~~~isE~~p-------~~~Rg~~ 292 (742)
T TIGR01299 227 DKLGRKQCL---LI-CLSVNGFFAFFSSF--VQGYGFFLFCRLLSGFGIGGAIPIV-FSYFAEFLA-------QEKRGEH 292 (742)
T ss_pred HHhCcHHHH---HH-HHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCC-------HHHHHHH
Confidence 788888665 33 22222222222222 2456666777788999888877655 457777765 3577888
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG 125 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G 125 (169)
.|++..++.+ |+++++.+...+...+|
T Consensus 293 ~g~~~~~~~i-----------------G~ila~~la~~il~~~G 319 (742)
T TIGR01299 293 LSWLCMFWMI-----------------GGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHhcc
Confidence 9999988888 99898887777765554
No 105
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=96.63 E-value=0.0053 Score=51.14 Aligned_cols=59 Identities=20% Similarity=0.388 Sum_probs=40.3
Q ss_pred HHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 43 LLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 43 l~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
+++.|+....-+....+.+..+..+ ++..+++.|+++..+++ |+++++.+.|++.|
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~-----------------~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQ-------AAQAAALSAMAQSIGYL-----------------LAALGPLFVGVLHD 347 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccC-------HHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHH
Confidence 3456766644333332222223222 34667889999999999 99999999999999
Q ss_pred ccC
Q psy11630 123 MTG 125 (169)
Q Consensus 123 ~~G 125 (169)
++|
T Consensus 348 ~~g 350 (355)
T TIGR00896 348 ISG 350 (355)
T ss_pred Hhc
Confidence 887
No 106
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=96.62 E-value=0.011 Score=52.44 Aligned_cols=34 Identities=3% Similarity=-0.193 Sum_probs=30.6
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
.+.+.|+.+....+ |+++++.+.|++.+.+||+.
T Consensus 141 r~~a~g~~~~~~~~-----------------g~~~~~~l~~~l~~~~gwr~ 174 (455)
T TIGR00892 141 RPLANGLAMAGSPV-----------------FLSTLAPLNQYLFESFGWRG 174 (455)
T ss_pred HHHHHHHHHhcccH-----------------HHHHHHHHHHHHHHHhChHH
Confidence 47888999988889 99999999999999999993
No 107
>TIGR00898 2A0119 cation transport protein.
Probab=96.59 E-value=0.0073 Score=52.92 Aligned_cols=93 Identities=20% Similarity=0.183 Sum_probs=56.0
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||... . +.+.......+...+ ..+++..++..++.|+...+-+... .+...|..++ +-.+.
T Consensus 151 ~Dr~Grr~~~---~-~~~~~~~i~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~-~~~~~e~~~~-------~~r~~ 216 (505)
T TIGR00898 151 SDRFGRKKVL---L-LSTLVTAVSGVLTAF--SPNYTVFLVFRLLVGMGIGGIWVQA-VVLNTEFLPK-------KQRAI 216 (505)
T ss_pred hhhccchHHH---H-HHHHHHHHHHHHHHH--cccHHHHHHHHHHHHhhccchHHHH-HHHhheecCh-------hhhHH
Confidence 3788988655 2 233333333233222 3567777777788898877766555 4567777653 33455
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+.++......+ |.++++++.+++.+ |+
T Consensus 217 ~~~~~~~~~~~-----------------g~~~~~~~~~~~~~---wr 243 (505)
T TIGR00898 217 VGTLIQVFFSL-----------------GLVLLPLVAYFIPD---WR 243 (505)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHhhH---HH
Confidence 66666555555 77777777666654 87
No 108
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=96.57 E-value=0.0046 Score=49.93 Aligned_cols=65 Identities=17% Similarity=0.097 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhh
Q psy11630 36 LTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGI 115 (169)
Q Consensus 36 ~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggi 115 (169)
.+...+.+++.|+....-.... .+...|..+ ++..+++.|+.+...++ |+++++.
T Consensus 301 ~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~-------~~~~g~~~~~~~~~~~~-----------------~~~~g~~ 355 (365)
T TIGR00900 301 FPLFLVLWFAIGVGYGPINVPQ-GTLLQRRVP-------AELLGRVFGAQFSLSHA-----------------AWPLGLI 355 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCC-------HHHHHHHHHHHHHHHHH-----------------HHHHHHH
Confidence 5555556667777665444333 345667655 35779999999999999 9999999
Q ss_pred HHHHhhhccC
Q psy11630 116 AAGLISDMTG 125 (169)
Q Consensus 116 liG~Isd~~G 125 (169)
+.|++.|++|
T Consensus 356 ~~g~l~~~~g 365 (365)
T TIGR00900 356 LAGPLADHLG 365 (365)
T ss_pred HHHHHHHHcC
Confidence 9999999765
No 109
>PRK11462 putative transporter; Provisional
Probab=96.57 E-value=0.0066 Score=54.25 Aligned_cols=81 Identities=12% Similarity=0.062 Sum_probs=55.7
Q ss_pred HhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhcc
Q psy11630 29 QLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDI 108 (169)
Q Consensus 29 ~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~Dv 108 (169)
.+.+..+.....+++++.|+.. +....+..+...|..++.+++..++.-|..-+.....-.+
T Consensus 311 ~~~~~~~~~~~~~~~~l~g~~~-~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Kl----------------- 372 (460)
T PRK11462 311 FFVPMQASITMFVFIFVIGVLH-QLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKL----------------- 372 (460)
T ss_pred HHhchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHH-----------------
Confidence 3344444333344455667665 4544444567888888888888889888877776666677
Q ss_pred chhhhhhHHHHhhhccCCc
Q psy11630 109 GGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~ 127 (169)
|.++++.+.|++.+..|++
T Consensus 373 g~alg~~i~g~iL~~~Gy~ 391 (460)
T PRK11462 373 GLAFGGALIGWMLAYGGYD 391 (460)
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 8888888888888776764
No 110
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.53 E-value=0.011 Score=51.41 Aligned_cols=59 Identities=15% Similarity=0.077 Sum_probs=36.4
Q ss_pred HHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhcc
Q psy11630 45 LLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMT 124 (169)
Q Consensus 45 l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~ 124 (169)
.++++..+.......+...|+-+ +|..+|+.|+.+..|++ +++...+++.+++ +.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~e~fp-------~~~r~t~~g~~~~~g~~----------------~~g~~~p~~~~~l-~~~ 399 (432)
T PRK10406 344 MCALLIVSFYTSISGILKAEMFP-------AQVRALGVGLSYAVANA----------------LFGGSAEYVALSL-KSI 399 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC-------CCccchhhhHHHHHHHH----------------HHHhHHHHHHHHH-HHh
Confidence 33444444333233456778876 36889999999988886 1344567777766 556
Q ss_pred CCc
Q psy11630 125 GKS 127 (169)
Q Consensus 125 GW~ 127 (169)
|+.
T Consensus 400 g~~ 402 (432)
T PRK10406 400 GME 402 (432)
T ss_pred CCC
Confidence 743
No 111
>PRK09528 lacY galactoside permease; Reviewed
Probab=96.52 E-value=0.0038 Score=53.64 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=26.9
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
..+.+.|+....+++ |.++++.+.|++.+ .+|+
T Consensus 138 ~~g~~~g~~~~~~~~-----------------g~~i~~~~~g~l~~-~~~~ 170 (420)
T PRK09528 138 RSGFEYGRARMWGSL-----------------GWALCAFIAGILFN-INPQ 170 (420)
T ss_pred hccccchhhHHhhhH-----------------HHHHHHHHHHHHHh-cCch
Confidence 346677777778888 99999999999988 4888
No 112
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=96.49 E-value=0.0059 Score=58.74 Aligned_cols=95 Identities=11% Similarity=0.073 Sum_probs=55.0
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||...--+.++....++..++.+ ...+++..+++.++.|+....-. -...+...|+.+. +-.+.
T Consensus 71 ~Dr~grk~~l~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~-~~~~~~i~~~~~~-------~~r~~ 139 (1146)
T PRK08633 71 ADKFSKNRVIRIVKLFEVGLTLLIVLAY---YLGWFWLAFAVTFLLGAQSAIYS-PAKYGIIPELVGK-------ENLSR 139 (1146)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHH---HHccHHHHHHHHHHHHHHHHhhc-hHHHhhhHHhcCc-------ccchh
Confidence 4788988655111111111222222221 12345656666666775543322 2223456677653 45677
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM 123 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~ 123 (169)
+.|+.....++ |.++|+++.|++.+.
T Consensus 140 ~~~~~~~~~~i-----------------g~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 140 ANGLLEAFTIV-----------------AILAGTALFSFLFES 165 (1146)
T ss_pred hhhHHHHHHHH-----------------HHHHHHHHHHHHHHh
Confidence 78888888888 999999999999876
No 113
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=96.47 E-value=0.0096 Score=52.97 Aligned_cols=97 Identities=19% Similarity=0.132 Sum_probs=55.0
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHH--------HHHHHHHHHhhhhcchHHHHHHHHhhhcccccccc
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLT--------MSIVLLLLLGSLVNGPYALITTAVSAELGTHECLE 72 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~--------~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~ 72 (169)
.||.|||... ++.+.+...+.++..+. .++. ..+++=++.|+...+-+... .+...|..+++
T Consensus 81 ~Dr~Grr~~l----~~~~~l~~i~~~~~a~~--~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~-~~~~~e~~p~~--- 150 (490)
T PRK10642 81 GDKYGRQKIL----AITIVIMSISTFCIGLI--PSYATIGIWAPILLLLCKMAQGFSVGGEYTGA-SIFVAEYSPDR--- 150 (490)
T ss_pred HHhcccHHHH----HHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHH-HHHHHHhCCCC---
Confidence 3788988655 34444444444444433 2222 23444467888877766555 46777876532
Q ss_pred CCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh--------hccCCcH
Q psy11630 73 GNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS--------DMTGKSA 128 (169)
Q Consensus 73 ~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is--------d~~GW~a 128 (169)
--+.+.|+....+.+ |.++|+.+..++. +.+|||.
T Consensus 151 ----~Rg~~~~~~~~~~~~-----------------G~~lg~~~~~~~~~~~~~~~~~~~gWR~ 193 (490)
T PRK10642 151 ----KRGFMGSWLDFGSIA-----------------GFVLGAGVVVLISTIVGEANFLDWGWRI 193 (490)
T ss_pred ----CCcHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHhcCHHHhcCccHHH
Confidence 234456666655555 6666665554443 2689994
No 114
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=96.40 E-value=0.0058 Score=59.51 Aligned_cols=98 Identities=14% Similarity=0.197 Sum_probs=60.6
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhh--cchHHHHHHHHhhhccccccccCCcchhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLV--NGPYALITTAVSAELGTHECLEGNSKALA 79 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi--~GP~~Li~~a~a~dlg~~~~l~~n~kA~a 79 (169)
||.|||..++...+..+..++..++.+. ..+++..+++.++.|+.- +.| ...+...|+.+. +-.+
T Consensus 77 Dr~~rk~~~~~~~~~~~~~~~~~~~~~~---~~s~~~l~~~~~l~gi~~a~~~p---~~~a~l~~~~~~-------~~~~ 143 (1140)
T PRK06814 77 DKYDKAKLAKILKFAEIGIAALAIYGFH---LNSVPLLFAALFLMGIHSALFGP---IKYSILPDHLNK-------DELL 143 (1140)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHhhch---HHHHhhHhhcCc-------cccc
Confidence 7788776431111222222222222222 245666666666666543 333 223456677653 4577
Q ss_pred hhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcHH
Q psy11630 80 TVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSAS 129 (169)
Q Consensus 80 tvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~ 129 (169)
.+.|+.+...++ |.++|+++.|++.+..||+..
T Consensus 144 ~a~~~~~~~~~i-----------------g~~igp~l~g~l~~~~~~~~~ 176 (1140)
T PRK06814 144 GANALVEAGTFI-----------------AILLGTIIGGLATISGNFVIL 176 (1140)
T ss_pred hhhHHHHHHHHH-----------------HHHHHHHHHHHHHhccccHHH
Confidence 788888888888 999999999999999999954
No 115
>PRK03699 putative transporter; Provisional
Probab=96.37 E-value=0.0062 Score=52.02 Aligned_cols=96 Identities=14% Similarity=0.040 Sum_probs=55.2
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... +..+.......+...+ .++++..++..++.|++...-+... .+...|..++ +..+.+
T Consensus 67 dr~g~r~~~----~~~~~~~~i~~~l~~~--~~~~~~~~~~~~l~G~~~g~~~~~~-~~~i~~~~~~-------~~r~~~ 132 (394)
T PRK03699 67 EIIPLKRQL----IFGFALMILAVAGLMF--SHSLALFSIAMFVLGVVSGITMSIG-TFLITHVYEG-------KQRGSR 132 (394)
T ss_pred HHhhHHHHH----HHHHHHHHHHHHHHHH--cchHHHHHHHHHHHHHhhHhhccch-hHHhhhhccc-------chHHHH
Confidence 677777433 3333333333333332 2456666666677787665433333 3345555442 344566
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh-hccCCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS-DMTGKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is-d~~GW~a 128 (169)
.++.+....+ |+.+++.+.+++. +.+||+.
T Consensus 133 ~~~~~~~~~~-----------------g~~~~~~~~~~l~~~~~gw~~ 163 (394)
T PRK03699 133 LLFTDSFFSM-----------------AGMIFPIIAAYLLARSIEWYW 163 (394)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHhccccHHH
Confidence 6776666666 8888888888875 4579994
No 116
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.33 E-value=0.0078 Score=53.56 Aligned_cols=90 Identities=18% Similarity=0.201 Sum_probs=53.2
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCC----cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcch
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGAT----SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKA 77 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~----~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA 77 (169)
||.|||... . ..+.......++..+.+.. +....++..++.|+..++-+.... +...|..++ |-
T Consensus 81 d~~Grr~~~---~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~-~~~~e~~p~-------~~ 148 (502)
T TIGR00887 81 DKLGRKRVY---G-MELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSA-IITSEFATK-------KW 148 (502)
T ss_pred HhhccHHHH---H-HHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHhcCh-------hh
Confidence 788888655 2 2222222222222222221 145566667788988888666553 567777664 45
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLI 120 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~I 120 (169)
-+++.++......+ |.++++.+.+++
T Consensus 149 Rg~~~~~~~~~~~~-----------------g~~~g~~~~~~~ 174 (502)
T TIGR00887 149 RGAMMAAVFAMQGF-----------------GILAGAIVALIV 174 (502)
T ss_pred HHHHHHHHHHHHHH-----------------HHHHHHHHHHHH
Confidence 67777777776666 777777666544
No 117
>TIGR00895 2A0115 benzoate transport.
Probab=96.25 E-value=0.0082 Score=49.09 Aligned_cols=61 Identities=31% Similarity=0.334 Sum_probs=46.6
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+.....+..++.|++..+.+.... +...|..++ +..+++.|+....+++ |+++|+
T Consensus 337 ~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~-------~~~g~~~g~~~~~~~~-----------------g~~~g~ 391 (398)
T TIGR00895 337 SPTLLLLLGAIAGFFVNGGQSGLY-ALMALFYPT-------AIRATGVGWAIGIGRL-----------------GAIIGP 391 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCH-------HHHHHHHHHHHHHHHH-----------------HHHHHH
Confidence 444555666788888877776664 567777653 5678899999999999 999999
Q ss_pred hHHHHh
Q psy11630 115 IAAGLI 120 (169)
Q Consensus 115 iliG~I 120 (169)
.+.|++
T Consensus 392 ~~~G~l 397 (398)
T TIGR00895 392 ILAGYL 397 (398)
T ss_pred HhHHhc
Confidence 999876
No 118
>PRK03633 putative MFS family transporter protein; Provisional
Probab=96.24 E-value=0.014 Score=49.61 Aligned_cols=35 Identities=9% Similarity=0.174 Sum_probs=27.7
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
..+++.+..+...++ |+++|+.+.|++.|++||+.
T Consensus 318 ~~~~~~~~~~~~~~l-----------------G~~igp~~~G~l~~~~g~~~ 352 (381)
T PRK03633 318 ELVAMNQALLLSYTV-----------------GSLLGPSFTAMLMQNYSDNL 352 (381)
T ss_pred HHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhCccH
Confidence 445566666655556 99999999999999999984
No 119
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.22 E-value=0.012 Score=51.13 Aligned_cols=61 Identities=16% Similarity=0.190 Sum_probs=30.3
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCC------cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccc
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGAT------SLTMSIVLLLLLGSLVNGPYALITTAVSAELGT 67 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~------~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~ 67 (169)
||.|||... +..+.......+...+.+.. +....+++=++.|+...+-+... .+...|..+
T Consensus 88 Dr~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~-~~~i~e~~p 154 (432)
T PRK10406 88 DKHGRKKSM----LISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTS-ATYMSEVAV 154 (432)
T ss_pred HhcCcHHHH----HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhH-HHHHHHhCC
Confidence 788888755 23333332222232222211 12234444568887776645444 356667655
No 120
>PRK11043 putative transporter; Provisional
Probab=96.22 E-value=0.015 Score=49.22 Aligned_cols=64 Identities=8% Similarity=0.067 Sum_probs=40.1
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.+.....+.+.+.|+.....+..+. +...|.. ++..+++.|+++.+++. ++.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~g~~~g~~~~~~~~-----------------~~~~~ 347 (401)
T PRK11043 294 PSLVPLLIPFCVMAAANGAIYPIVV-AQALRPF--------PQATGKAAALQNTLQLG-----------------LCFLA 347 (401)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhC--------cccChHHHHHHHHHHHH-----------------HHHHH
Confidence 3444333444455665555444443 2333332 23578899999998888 88889
Q ss_pred hhHHHHhhhc
Q psy11630 114 GIAAGLISDM 123 (169)
Q Consensus 114 giliG~Isd~ 123 (169)
+.++|.+.|.
T Consensus 348 ~~~~g~l~~~ 357 (401)
T PRK11043 348 SLLVSALIST 357 (401)
T ss_pred HHHHHHccCC
Confidence 9999988874
No 121
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=96.13 E-value=0.01 Score=53.34 Aligned_cols=99 Identities=14% Similarity=0.035 Sum_probs=54.8
Q ss_pred Cc-CCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 2 TR-LGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 2 ~~-~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
|| +|||.-. ++.+.......+...+ ..+.+...+.+++.|+...+-.... .+...|..++++. +-.++
T Consensus 73 Dr~~G~~~~l----~~~~~~~~~g~~~~~~--~~~~~~~~~~~~l~g~g~g~~~~~~-~~~~a~~~~~~~~----~~r~~ 141 (475)
T TIGR00924 73 DRVWGTKKTM----VLGGIVLMLGHFMLAM--SIYPDLIFYGLGTIAVGSGLFKANP-SSMVGKLYERGDM----PRRDG 141 (475)
T ss_pred HhhcchHHHH----HHHHHHHHHHHHHHHh--cccHhHHHHHHHHHHhccccccCCH-HHHHHHhcCCCCc----ccccc
Confidence 56 6776544 3344444444444433 2234333334445555433211122 2344566543211 12344
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
+.++.....++ |+++|+++.|++.+++||+.
T Consensus 142 ~~~~~~~~~ni-----------------G~~ig~~l~g~l~~~~g~~~ 172 (475)
T TIGR00924 142 GFTLFYMSINI-----------------GSFISPLLAGVIAENYGYHV 172 (475)
T ss_pred eehhHHHHHHH-----------------HHHHHHHHHHHHHHhcChHH
Confidence 56777777778 99999999999999999994
No 122
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.11 E-value=0.021 Score=48.61 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=44.5
Q ss_pred HHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHh
Q psy11630 41 VLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLI 120 (169)
Q Consensus 41 ~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~I 120 (169)
..++++|++...-+..+.+.....+++ ..++++++. .+|++ |+++.+.++|.+
T Consensus 235 ~~~~l~g~~~s~i~P~~~s~a~~~~~~---------~~~~asai~-~~~~~-----------------Gg~i~P~l~G~l 287 (310)
T TIGR01272 235 WFVLALGLFNSIMFPTIFSLALNALGR---------HTSQGSGIL-CLAIV-----------------GGAIVPLLQGSL 287 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhh---------hhhhhHHHH-HHHHh-----------------cchHHHHHHHHH
Confidence 355578988888888875444444543 234556665 68889 999999999999
Q ss_pred hhccCCcH
Q psy11630 121 SDMTGKSA 128 (169)
Q Consensus 121 sd~~GW~a 128 (169)
+|.+|-+.
T Consensus 288 ad~~g~~~ 295 (310)
T TIGR01272 288 ADCLGIQL 295 (310)
T ss_pred HHhccchH
Confidence 99988764
No 123
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.10 E-value=0.018 Score=53.25 Aligned_cols=61 Identities=20% Similarity=0.300 Sum_probs=43.6
Q ss_pred cccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH---HHHHHHHHhHHhhhhh
Q psy11630 68 HECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA---SVCATMLVLSIPMKQK 144 (169)
Q Consensus 68 ~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a---~~c~~mlll~~~~~e~ 144 (169)
++....+++..|.|+|+++..|.+ |+.+-+++.|...|.+|-.. ..+.+..++++.+.-+
T Consensus 390 ~~~~~~~~~~~g~v~G~v~a~G~~-----------------Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 390 EQAQREAVTETAAALGFISAIGAV-----------------GGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHc-----------------ccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 444556677899999999999999 99999999999998887441 2333444444444444
Q ss_pred c
Q psy11630 145 G 145 (169)
Q Consensus 145 ~ 145 (169)
.
T Consensus 453 ~ 453 (462)
T PRK15034 453 V 453 (462)
T ss_pred H
Confidence 3
No 124
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=95.97 E-value=0.021 Score=47.61 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=52.2
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|+|... .+.+.......+.+ . ..+.+...+..++.|+....-..... ....|..+ +-.+.+
T Consensus 60 dr~g~r~~~----~~~~~~~~~~~~~~-~--~~~~~~l~~~~~~~g~g~~~~~~~~~-~~~~~~~~--------~~~~~~ 123 (355)
T TIGR00896 60 RRFGEERSV----AAGLLLIAAGILIR-S--APGTALLFAGTALIGVGIAIINVLLP-SLIKRDFP--------QRVGLM 123 (355)
T ss_pred HHhCchHHH----HHHHHHHHHHHHHH-H--hccHHHHHHHHHHHHHHHHHHhccch-HHHHHhCc--------chhhHH
Confidence 678887554 33333333333333 2 23444444444556665544322222 22333322 235667
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC--CcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG--KSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G--W~a 128 (169)
.|+.+....+ |..+++.+.+.+.+..+ |+.
T Consensus 124 ~~~~~~~~~~-----------------g~~i~~~~~~~l~~~~~~~w~~ 155 (355)
T TIGR00896 124 TGLYSMALMG-----------------GAALAAAATVPLAQHSGGHWQQ 155 (355)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHhhhhhHHH
Confidence 7888777777 88899999998887653 873
No 125
>PRK03633 putative MFS family transporter protein; Provisional
Probab=95.92 E-value=0.015 Score=49.40 Aligned_cols=95 Identities=9% Similarity=0.044 Sum_probs=53.9
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... ...+.+.....+.+.+ .++++...+..++.|+....-.....+ +..|..+. +..+.+
T Consensus 66 dr~g~k~~~----~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~-------~~~~~~ 131 (381)
T PRK03633 66 KRIGFNRSY----YLASLIFAAGCAGLGL--MVGFWSWLAWRFVAGIGCAMIWVVVES-ALMCSGTS-------RNRGRL 131 (381)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCH-------HHHHHH
Confidence 577776555 2233333333333333 345666666667777765443322322 23344432 234666
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.|+.....++ |.++|+.+.+.+.+.+.|.
T Consensus 132 ~~~~~~~~~~-----------------g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 132 LAAYMMVYYL-----------------GTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHhcccccccch
Confidence 6777766777 9999999999988764343
No 126
>KOG2533|consensus
Probab=95.91 E-value=0.012 Score=54.78 Aligned_cols=56 Identities=30% Similarity=0.319 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHH
Q psy11630 38 MSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAA 117 (169)
Q Consensus 38 ~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggili 117 (169)
..+..+...||+.|.|..+.+ ..++++.+++.||+++|+|++++.++.
T Consensus 282 ~~~~~lv~~~~~~~lpl~l~~--------------------------------~~~~s~~~a~~ls~~~~~~g~v~~i~a 329 (495)
T KOG2533|consen 282 YFFLKLVNYGFSYWLPLYLKS--------------------------------NGGYSELQANLLSTPYDVGGIVGLILA 329 (495)
T ss_pred HHHHhhccccHHHHHHHHHHc--------------------------------CCCcChHHhccccchHHhhhHHHHHHH
Confidence 345555678899999988774 134678899999999999999999999
Q ss_pred HHhhhccC
Q psy11630 118 GLISDMTG 125 (169)
Q Consensus 118 G~Isd~~G 125 (169)
|+++|+..
T Consensus 330 g~lsdr~~ 337 (495)
T KOG2533|consen 330 GYLSDRLK 337 (495)
T ss_pred HHHHHHHh
Confidence 99999953
No 127
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=95.89 E-value=0.02 Score=48.76 Aligned_cols=29 Identities=14% Similarity=0.101 Sum_probs=22.9
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.-|.+...|++ |.++|+.+.|++.+ +||+
T Consensus 134 ~~g~~~~~~~~-----------------g~~~g~~~~g~l~~-~~~~ 162 (396)
T TIGR00882 134 EYGKARMFGCV-----------------GWALCASIAGILFS-IDPQ 162 (396)
T ss_pred ccchhhhhccc-----------------HHHHHHHHHhhhhc-cCch
Confidence 34556666778 99999999999887 5999
No 128
>PRK10133 L-fucose transporter; Provisional
Probab=95.89 E-value=0.03 Score=49.70 Aligned_cols=82 Identities=18% Similarity=0.175 Sum_probs=51.8
Q ss_pred HHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHH
Q psy11630 40 IVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGL 119 (169)
Q Consensus 40 ~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~ 119 (169)
...++++|++...-+..+-+ .+.+.-+ |..++++|+.. +..+ |+++++.++|+
T Consensus 351 ~~~~~l~glg~~~i~P~~~s-~a~~~~~--------~~~~~as~l~~-~~~~-----------------g~~~~~~i~G~ 403 (438)
T PRK10133 351 LIALTLCSAFMSIQYPTIFS-LGIKNLG--------QDTKYGSSFIV-MTII-----------------GGGIVTPVMGF 403 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHcccc--------hhhccchhHHh-HHhc-----------------cchHHHHHHHH
Confidence 44566788888777777754 4444322 23567788875 5557 88899999999
Q ss_pred hhhccC-CcH--HHHHHHHHhHHhhhhhcccc
Q psy11630 120 ISDMTG-KSA--SVCATMLVLSIPMKQKGNQE 148 (169)
Q Consensus 120 Isd~~G-W~a--~~c~~mlll~~~~~e~~~~~ 148 (169)
+.|.+| =+. .+.++.++..+.+-..++|.
T Consensus 404 l~~~~g~~~~~~~v~~~~~~~~~~~~~~~~~~ 435 (438)
T PRK10133 404 VSDAAGNIPTAELIPALCFAVIFIFARFRSQT 435 (438)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999887 442 23334444444444444443
No 129
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=95.87 E-value=0.057 Score=49.99 Aligned_cols=91 Identities=16% Similarity=0.101 Sum_probs=59.0
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhh--cCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLL--GATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALA 79 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~--~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~a 79 (169)
||.|.|..+ .+..+..++++++.-... ..++++..+++-++.|+. |..+........+..+ ++-.|
T Consensus 95 Dr~G~R~v~---~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig--g~~f~~~~~~vs~wfp-------~~~rG 162 (462)
T PRK15034 95 PIFGGRRWT---VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA--GANFASSMGNISFFFP-------KAKQG 162 (462)
T ss_pred HHhCChHHH---HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH--HHhHHHHHHHHHHHCC-------HhHhH
Confidence 678877655 344444444444332211 225677777777788884 6555555455555554 35689
Q ss_pred hhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh
Q psy11630 80 TVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS 121 (169)
Q Consensus 80 tvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is 121 (169)
++.|+..+.|.+ |..+++++++.+.
T Consensus 163 ~A~Gi~~g~G~~-----------------G~~l~~~l~p~~i 187 (462)
T PRK15034 163 SALGINGGLGNL-----------------GVSVMQLVAPLVI 187 (462)
T ss_pred HHHHHHHHHHhh-----------------HHHHHHHHHHHHH
Confidence 999999999999 9988888887654
No 130
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=95.84 E-value=0.035 Score=47.23 Aligned_cols=20 Identities=30% Similarity=0.260 Sum_probs=18.6
Q ss_pred chhhhhhHHHHhhhccCCcH
Q psy11630 109 GGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~a 128 (169)
|+++++++.|++.|.+||+.
T Consensus 356 g~~~~~~l~G~l~~~~G~~~ 375 (396)
T TIGR00882 356 AMIFLSTLAGNMYDSIGFQG 375 (396)
T ss_pred HHHHHHHhHHHHHHhcccHH
Confidence 99999999999999999984
No 131
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=95.79 E-value=0.046 Score=49.21 Aligned_cols=71 Identities=15% Similarity=0.158 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhh
Q psy11630 36 LTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGI 115 (169)
Q Consensus 36 ~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggi 115 (169)
.....+++++++|+...-+-... +...|..+++ ++..+.+-+..-+.-++ |.++|+.
T Consensus 120 ~~~~~~~~~l~~~~~a~~dv~~d-a~~~e~~~~~-----~~~~~~~~s~~~~~~~~-----------------G~~vg~~ 176 (468)
T TIGR00788 120 AKVAAAFIFLAALAKALYDVLVD-SLYSERIRES-----PSAGPSLVSWMWGASAT-----------------GGLISSL 176 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHH-HHHhhhhhcC-----CCcCCCeeeHHHHHHHH-----------------HHHHHHH
Confidence 33444467777777666665443 5666665521 12222222222222234 8889999
Q ss_pred HHHHhhhccCCcHH
Q psy11630 116 AAGLISDMTGKSAS 129 (169)
Q Consensus 116 liG~Isd~~GW~a~ 129 (169)
+.|.+.+++||+..
T Consensus 177 l~G~l~~~~~~~~~ 190 (468)
T TIGR00788 177 LGGPLLDKTLTRIL 190 (468)
T ss_pred HHHHHHHhcCcchH
Confidence 99999999999943
No 132
>PRK10091 MFS transport protein AraJ; Provisional
Probab=95.76 E-value=0.074 Score=45.28 Aligned_cols=19 Identities=16% Similarity=0.443 Sum_probs=16.8
Q ss_pred chhhhhhHHHHhhhc-cCCc
Q psy11630 109 GGIFGGIAAGLISDM-TGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~-~GW~ 127 (169)
|.++|+.+.|++.|. .+|+
T Consensus 336 g~~~Gp~~~G~l~~~~~~~~ 355 (382)
T PRK10091 336 GSAIGAYCGGMMLTLGLAYN 355 (382)
T ss_pred HHHHHHHHhHHHHHcccCcc
Confidence 999999999999996 4677
No 133
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=95.75 E-value=0.07 Score=47.00 Aligned_cols=70 Identities=14% Similarity=0.035 Sum_probs=46.3
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.+.+..+++-++.|++...-.... .+...|..++ +-.|.+.|+.+..+++ |++++
T Consensus 120 ~~~~~l~~~r~l~G~~~~~~~~~~-~~~i~~~~~~-------~~rg~a~gi~~~~~~l-----------------G~~l~ 174 (467)
T PRK09556 120 VSLGLMIALWALSGFFQSTGGPCS-YSTITRWTPR-------RKRGRFLGFWNISHNL-----------------GGAGA 174 (467)
T ss_pred chHHHHHHHHHHHHHHHhccchHH-HHHHHHHcCc-------cceeeeEEeeecccch-----------------hhhHH
Confidence 456666666677787543221122 2355666553 3467788999988999 99999
Q ss_pred hhHHHHhhhcc---CCcH
Q psy11630 114 GIAAGLISDMT---GKSA 128 (169)
Q Consensus 114 giliG~Isd~~---GW~a 128 (169)
+++..++.+.+ +|+.
T Consensus 175 ~~i~~~~~~~~~~~~~~~ 192 (467)
T PRK09556 175 GGVALWGANYFFDGHVIG 192 (467)
T ss_pred HHHHHHHHHhhccCcchh
Confidence 99888877654 5773
No 134
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=95.70 E-value=0.074 Score=49.62 Aligned_cols=70 Identities=17% Similarity=0.111 Sum_probs=50.3
Q ss_pred CCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhh
Q psy11630 33 ATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIF 112 (169)
Q Consensus 33 ~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaai 112 (169)
..+.+..++.+++.|++.-.-..... +..+...+ ++-.|-|.++....... +.++
T Consensus 304 ~~~~~~~~~~l~l~G~~~~~~~~~~~-t~~Q~~~P-------~~~~GRv~si~~~~~~g-----------------~~~l 358 (524)
T PF05977_consen 304 SPSFWLALIALFLAGAAWIIANSSLN-TLVQLSVP-------DWVRGRVFSIYQMVFFG-----------------GMPL 358 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCC-------HHHHhHHHHHHHHHHHH-----------------HHHH
Confidence 34566677777888877655444443 45555555 35788888887766666 7788
Q ss_pred hhhHHHHhhhccCCc
Q psy11630 113 GGIAAGLISDMTGKS 127 (169)
Q Consensus 113 ggiliG~Isd~~GW~ 127 (169)
|.++.|.++|.+|-+
T Consensus 359 Gsll~G~la~~~g~~ 373 (524)
T PF05977_consen 359 GSLLWGFLADHFGVR 373 (524)
T ss_pred HHHHHHHHHHHhCHH
Confidence 999999999999887
No 135
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=95.70 E-value=0.032 Score=47.94 Aligned_cols=68 Identities=13% Similarity=0.075 Sum_probs=40.1
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccch-hhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGG-IFG 113 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGa-aig 113 (169)
+++...+..++.|+... .......+...|..+ ++..+.+.|+.....++ |. +++
T Consensus 104 ~~~~l~~~~~i~G~g~~-~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~-----------------g~~~~g 158 (402)
T TIGR00897 104 NYPLILLFYGIRGLGYP-LFAYSFLVWVVYNTK-------QDNLSSAVGWFWAVYSI-----------------GIGVFG 158 (402)
T ss_pred cHHHHHHHHHHHHcchH-HHHhHHHHHHHHhCC-------HHHHHHHHHHHHHHHHH-----------------HHHHHH
Confidence 45444444445565432 222111223345444 24568888888877777 75 578
Q ss_pred hhHHHHhhhccCCc
Q psy11630 114 GIAAGLISDMTGKS 127 (169)
Q Consensus 114 giliG~Isd~~GW~ 127 (169)
+++.+++.+.+||+
T Consensus 159 ~~~~~~l~~~~g~~ 172 (402)
T TIGR00897 159 SYYSSYAIPAFGEM 172 (402)
T ss_pred HHHHHhcccccchH
Confidence 88888999888943
No 136
>PRK10054 putative transporter; Provisional
Probab=95.64 E-value=0.067 Score=46.31 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=17.6
Q ss_pred chhhhhhHHHHhhhccCCc
Q psy11630 109 GGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~ 127 (169)
|.++|+++.|++.|++|-.
T Consensus 345 G~~~Gp~~~G~l~~~~g~~ 363 (395)
T PRK10054 345 GAAINPLVSGVILTTLPPW 363 (395)
T ss_pred HHHHHHHHHHHHHHHcChh
Confidence 9999999999999999865
No 137
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=95.51 E-value=0.047 Score=47.01 Aligned_cols=95 Identities=11% Similarity=0.027 Sum_probs=55.2
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|||... ...+.....+.+...+ .++++...+.-++.|+....-+..+ .+...|.- + ++ .+.+
T Consensus 69 dr~G~r~~l----~~~~~l~~~~~~~~~~--a~~~~~ll~~r~l~Gig~~~~~~~~-~~~~~~~~-----~-~~--~~~~ 133 (393)
T PRK09705 69 QHVSERRSV----AISLLLIAVGALMREL--YPQSALLLSSALLGGVGIGIIQAVM-PSVIKRRF-----Q-QR--TPLV 133 (393)
T ss_pred HHhCchHHH----HHHHHHHHHHHHHHHH--CcchHHHHHHHHHHHhHHHHHhhhh-hHHHHHHc-----c-cc--chhH
Confidence 678888766 3344444444444443 3455555555567777655422222 22222221 1 22 4567
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhcc-CCcH
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMT-GKSA 128 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~-GW~a 128 (169)
.|+.....+. |..+|+.+.+++.++. ||+.
T Consensus 134 ~g~~~~~~~~-----------------g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 134 MGLWSAALMG-----------------GGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHHHhcCCHHH
Confidence 7777666667 8888999999998876 8984
No 138
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=95.47 E-value=0.05 Score=46.19 Aligned_cols=36 Identities=19% Similarity=0.346 Sum_probs=31.8
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
+..+++.|+.+...++ |.++|+.+.|++.|.+|++.
T Consensus 336 ~~~g~~~~~~~~~~~l-----------------g~~~g~~~~G~l~~~~G~~~ 371 (390)
T TIGR02718 336 DQAGTDVTAVQSTRDL-----------------GELIASSIAGYLTDRFGYAG 371 (390)
T ss_pred cchHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHccHH
Confidence 5778888888888888 99999999999999999974
No 139
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=95.45 E-value=0.029 Score=48.47 Aligned_cols=92 Identities=11% Similarity=0.090 Sum_probs=53.0
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
.||.|||.-. +..........+.+.+. .+. .+..++.|+.... ..-...+...|..++ +..+.
T Consensus 62 aDr~grr~vl----~~~~~~~~~~~~~~~~~--~~~---~~~r~l~G~~~a~-~~pa~~a~i~~~~~~-------~~~~~ 124 (393)
T PRK11195 62 ADSFPKGRVM----FIANGIKLLGCLLMLFG--IHP---LLAYGLVGIGAAA-YSPAKYGILTELLPG-------EKLVK 124 (393)
T ss_pred hhccCCchhh----HHHHHHHHHHHHHHHHH--HHH---HHHHHHHHHHHHH-HHHHHHHHHHHHcCH-------HHHHH
Confidence 3899999877 22222222222222211 112 2223345544332 222334456677663 46788
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+.|+......+ |.++|+.+.|++.+.. |+
T Consensus 125 a~~~~~~~~~~-----------------~~~~Gp~lgG~l~~~~-~~ 153 (393)
T PRK11195 125 ANGWMEGSTIA-----------------AILLGTVLGGALADPH-AE 153 (393)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH-HH
Confidence 88888877777 8889999999999854 66
No 140
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=95.32 E-value=0.053 Score=51.47 Aligned_cols=93 Identities=11% Similarity=0.102 Sum_probs=58.5
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||+|-|+-. .+..+..++..++.-+ .+++....++-++.|+.-.+=. -....++.=. + ++--+++
T Consensus 87 DrlG~K~vL---~l~~l~Wsl~t~L~~f---a~Sl~~L~i~R~llGvaEA~~~-A~~syI~~Wf-P-------~kER~ra 151 (511)
T TIGR00806 87 DYLRYKPVL---VLQALSFVCVWLLLLL---GTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLV-P-------PSRYQRA 151 (511)
T ss_pred HHhCchHHH---HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC-C-------HHHHHHH
Confidence 677777655 3333333333333322 2456666677778887755444 3322333333 3 3567888
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+|+.+..-.+ |.++++++.+++. .+||+
T Consensus 152 tsi~~sg~~v-----------------G~~Ia~~L~qll~-s~gWr 179 (511)
T TIGR00806 152 AAYSRAAVLL-----------------GVFLSSVLGQLLV-TLGWI 179 (511)
T ss_pred HHHHHHHHHH-----------------HHHHHHHHHHHHH-hcCch
Confidence 8999988888 9999999999954 68999
No 141
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=95.22 E-value=0.038 Score=51.44 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=28.6
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
-.++.|+....+.+ |+.+++++.|++.+.+||+.
T Consensus 136 R~sgf~i~Y~~~nl-----------------G~~iap~l~g~L~~~~Gw~~ 169 (493)
T PRK15462 136 RDGGFSLMYAAGNV-----------------GSIIAPIACGYAQEEYSWAM 169 (493)
T ss_pred ccceehHHHHHHHH-----------------HHHHHHHHHHHHHhhhChHH
Confidence 45567777777778 99999999999999999993
No 142
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=95.19 E-value=0.14 Score=47.24 Aligned_cols=87 Identities=20% Similarity=0.180 Sum_probs=62.9
Q ss_pred CCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhh
Q psy11630 33 ATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIF 112 (169)
Q Consensus 33 ~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaai 112 (169)
..+.+...++=+++|+++++-|...- +.-.++.+++ -.+.-=|+-+.+|-. .+.+
T Consensus 377 ~~~~~~f~~~a~~~G~~~G~~qs~sR-s~~~~LiP~g-------~e~efFgly~i~gk~-----------------ss~l 431 (477)
T PF11700_consen 377 LKSPWEFWVLAVLIGLFMGGIQSASR-SLFSRLIPPG-------REAEFFGLYAITGKA-----------------SSWL 431 (477)
T ss_pred cccHHHHHHHHHHHHHHhhhHHHHHH-HHHHHhCCCc-------hhhHHHHHHHHHHHH-----------------HHHH
Confidence 44455444455578988888888875 6888888753 338888999999999 8999
Q ss_pred hhhHHHHhhhccCC-c--HHHHHHHHHhHHhhhhh
Q psy11630 113 GGIAAGLISDMTGK-S--ASVCATMLVLSIPMKQK 144 (169)
Q Consensus 113 ggiliG~Isd~~GW-~--a~~c~~mlll~~~~~e~ 144 (169)
|+++.|.+.|.+|- | ...+.+++++.+++--.
T Consensus 432 GPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 432 GPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 99999999999983 3 34555555555555443
No 143
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=95.16 E-value=0.068 Score=45.17 Aligned_cols=20 Identities=20% Similarity=0.169 Sum_probs=15.2
Q ss_pred chhhhhhHHHHhhhccCCcH
Q psy11630 109 GGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~a 128 (169)
+..+|+.+.|++.+.+|+.+
T Consensus 335 ~~~~g~~~~~~l~~~~g~~~ 354 (392)
T PRK10473 335 AQVCGSSLWIWLAAVLGISA 354 (392)
T ss_pred HHHHHHHHHHHHHHHhccch
Confidence 55677888888888888773
No 144
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=95.10 E-value=0.07 Score=45.75 Aligned_cols=20 Identities=20% Similarity=0.479 Sum_probs=16.9
Q ss_pred chhhhhhHHHHhhhccCCcH
Q psy11630 109 GGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~a 128 (169)
|.++++.+.|++.|++||+.
T Consensus 351 ~~~~~~~~~G~l~~~~G~~~ 370 (402)
T PRK11902 351 GRVYVGPTSGYLVEAYGWPG 370 (402)
T ss_pred HHHHHHHHHHHHHHHhChHH
Confidence 66667788999999999993
No 145
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=95.09 E-value=0.036 Score=48.75 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=49.8
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhh-cCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLL-GATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~-~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
+|.|||.-. +..+.+...+.+.+... ...+++..++..++.|+....-+.... +...+++++ +-.+.
T Consensus 63 ~r~G~r~~~----~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~-~~~~~~~~~-------~~~~~ 130 (410)
T TIGR00885 63 KKLSYKAGI----LLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAAN-PYILVMGPE-------STATR 130 (410)
T ss_pred HHhCchHHH----HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhh-HHHHHHCCH-------hHHHH
Confidence 677776544 44444444444443322 224566666666677776555444333 234445443 22445
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS 121 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is 121 (169)
..++..+...+ |+.+++.+.+.+.
T Consensus 131 ~~~~~~~~~~l-----------------G~~~g~~i~~~l~ 154 (410)
T TIGR00885 131 RLNLAQSFNPF-----------------GSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHH
Confidence 56666666667 7778877777663
No 146
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=95.07 E-value=0.06 Score=46.52 Aligned_cols=62 Identities=15% Similarity=0.045 Sum_probs=36.3
Q ss_pred HHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHh
Q psy11630 41 VLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLI 120 (169)
Q Consensus 41 ~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~I 120 (169)
+.=++.|+...+-+... .+...|..++ |-.+.+.|+......+ |.+++.++.+.+
T Consensus 125 ~~R~l~G~~~g~~~~~~-~~~i~e~~~~-------~~rg~~~~~~~~~~~~-----------------G~~~~~~~~~~~ 179 (479)
T PRK10077 125 IYRIIGGIGVGLASMLS-PMYIAEIAPA-------HIRGKLVSFNQFAIIF-----------------GQLVVYFVNYFI 179 (479)
T ss_pred HHHHHHhhhHhHHhhHH-HHHHHhhCCh-------hhhhHHHHHHHHHHHH-----------------HHHHHHHHHHHH
Confidence 33356777766655555 3556677663 2345566666655555 666665544433
Q ss_pred h--------hccCCc
Q psy11630 121 S--------DMTGKS 127 (169)
Q Consensus 121 s--------d~~GW~ 127 (169)
. +.+|||
T Consensus 180 ~~~~~~~~~~~~gWr 194 (479)
T PRK10077 180 ARSGDASWLNTDGWR 194 (479)
T ss_pred hccCcccccccCChH
Confidence 2 457999
No 147
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=94.99 E-value=0.062 Score=48.91 Aligned_cols=21 Identities=33% Similarity=0.373 Sum_probs=19.1
Q ss_pred cchhhhhhHHHHhhhccCCcH
Q psy11630 108 IGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 108 vGaaiggiliG~Isd~~GW~a 128 (169)
+|+++|+.+.|++.+++||+.
T Consensus 154 ig~~~g~~l~g~l~~~~gw~~ 174 (489)
T PRK10207 154 IGSLISLSLAPVIADKFGYSV 174 (489)
T ss_pred HHHHHHHHHHHHHHHhhChHH
Confidence 399999999999999999994
No 148
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=94.99 E-value=0.078 Score=45.14 Aligned_cols=35 Identities=11% Similarity=-0.114 Sum_probs=29.9
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+..+++.|+.+....+ |.++|+.+.+++-+..+|.
T Consensus 340 ~~~g~~~~~~~~~~~~-----------------~~~~g~~~~~~l~~~~~~~ 374 (406)
T PRK15402 340 VSKGTVSAAMGMLSML-----------------IFTVGIELSKHAYLGGGNG 374 (406)
T ss_pred ccccHHHHHHHHHHHH-----------------HHHHHHHHHHhcccCCchH
Confidence 3568899999888888 8899999999998888876
No 149
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=94.98 E-value=0.081 Score=45.86 Aligned_cols=54 Identities=24% Similarity=0.390 Sum_probs=37.5
Q ss_pred HHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc
Q psy11630 44 LLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM 123 (169)
Q Consensus 44 ~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~ 123 (169)
+.+|..+..|... +...|..+ ++..|++.|+.+...++ |+++|+.+.|++.|.
T Consensus 307 ~~~g~~~~~p~~~---~~~~~~~p-------~~~~g~~~g~~~~~~~~-----------------g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 307 FYIGSIIAEPARE---TLSASLAD-------ARARGSYMGFSRLGLAL-----------------GGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHccHH---HHHHhcCC-------cccchhhhhHHHHHHHH-----------------HHHhcccchHHHHHH
Confidence 3444444444422 34556554 35778888888877777 999999999999997
Q ss_pred c
Q psy11630 124 T 124 (169)
Q Consensus 124 ~ 124 (169)
.
T Consensus 360 ~ 360 (400)
T PRK11646 360 G 360 (400)
T ss_pred H
Confidence 5
No 150
>PRK11462 putative transporter; Provisional
Probab=94.95 E-value=0.14 Score=45.81 Aligned_cols=91 Identities=15% Similarity=0.137 Sum_probs=46.3
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCc----HHHHHHH---HHHHhhhhcchHHHHHHHHhhhccccccccCC
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATS----LTMSIVL---LLLLGSLVNGPYALITTAVSAELGTHECLEGN 74 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~----~~~~~~l---l~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n 74 (169)
+|.|||.|- -++.-.......+..+..|..+ ..+..+. +.+.=-++.-||.-+.+ |+++.
T Consensus 74 ~r~Gr~rp~---il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~----~lt~d------ 140 (460)
T PRK11462 74 SRWGKFRPW---VLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGG----VITND------ 140 (460)
T ss_pred CCCCCcchh---HhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHH----HhcCC------
Confidence 578998877 4444333333333333333322 2222222 22333456677765544 44432
Q ss_pred cchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 75 SKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 75 ~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
.+--..++++....+++ |+++++.++..+..
T Consensus 141 ~~eRt~l~s~r~~~~~i-----------------G~~~~~~~~~plv~ 171 (460)
T PRK11462 141 PTQRISLQSWRFVLATA-----------------GGMLSTVLMMPLVN 171 (460)
T ss_pred HHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHH
Confidence 34455666777777777 77676666544333
No 151
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=94.91 E-value=0.056 Score=45.73 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=28.2
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+..+++.++.++...+ |+++++.+.|++.+...+.
T Consensus 330 ~~~g~~~~~~~~~~~l-----------------g~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 330 YLAGTAGALLGGLQNI-----------------GSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred ccchHHHHHHHHHHHH-----------------HHHHHHHHHHHccCCchHH
Confidence 4568889999988888 9999999999987764454
No 152
>PRK10133 L-fucose transporter; Provisional
Probab=94.75 E-value=0.11 Score=46.01 Aligned_cols=90 Identities=12% Similarity=0.125 Sum_probs=51.2
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHH-hhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQ-LLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~-~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
||.|||... +..+.....+.+++. ...+.+++..++..++.|+....-+..... ...|..+++ ..+.
T Consensus 86 dr~G~r~~l----~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~-~v~~~~~~~-------~~~~ 153 (438)
T PRK10133 86 KKLSYKAGI----ITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANP-FVTVLGPES-------SGHF 153 (438)
T ss_pred HHhCcHHHH----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHH-HHHHhCChh-------hHHH
Confidence 688888655 333333334433332 123456777777778888877766555543 334665432 2223
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHh
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLI 120 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~I 120 (169)
..++...+.++ |.++++++.+.+
T Consensus 154 ~~s~~~~~~~~-----------------G~~~g~~~g~~l 176 (438)
T PRK10133 154 RLNLAQTFNSF-----------------GAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHH
Confidence 45666666666 777777765543
No 153
>KOG2504|consensus
Probab=94.74 E-value=0.14 Score=47.70 Aligned_cols=71 Identities=28% Similarity=0.305 Sum_probs=54.1
Q ss_pred cCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchh
Q psy11630 32 GATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGI 111 (169)
Q Consensus 32 ~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaa 111 (169)
..++++..+..-.+.||++..=..+. ..+..|+..-+ -+.-+-|+.-.+..+ ++.
T Consensus 384 ~~~~~~~l~~~~~~fG~~~g~~~~l~-~~i~~~~~g~~-------~l~~a~Gl~l~~~gi-----------------~~l 438 (509)
T KOG2504|consen 384 FATTYVGLIVFSILFGFCVGSFSSLT-PVILVDLVGLE-------KLSNAYGLLLLFQGI-----------------GAL 438 (509)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcChh-------hcchHHHHHHHHhHH-----------------HHH
Confidence 34566666666678888877655555 46888886643 566777888888888 888
Q ss_pred hhhhHHHHhhhccC-Cc
Q psy11630 112 FGGIAAGLISDMTG-KS 127 (169)
Q Consensus 112 iggiliG~Isd~~G-W~ 127 (169)
+|+.++|++.|.+| |.
T Consensus 439 ~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 439 VGPPIAGLLYDITGNYD 455 (509)
T ss_pred cCcccceeeeeccCCee
Confidence 99999999999998 76
No 154
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=94.65 E-value=0.044 Score=47.13 Aligned_cols=69 Identities=16% Similarity=0.107 Sum_probs=43.9
Q ss_pred CCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhh
Q psy11630 33 ATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIF 112 (169)
Q Consensus 33 ~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaai 112 (169)
..+.+.....+++.|+....-...... ...+..+ ++-.++++|+.+.+..+ |+++
T Consensus 345 ~~~~~~~~~~~~l~g~g~~~~~~~~~~-~~~~~~~-------~~~~g~~~~~~~~~~~~-----------------g~~i 399 (485)
T TIGR00711 345 DTPFLAIALPQFIRGFGMGCFFMPLTT-IALSGLP-------PHKIARGSSLSNFTRQL-----------------GGSI 399 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCC-------HHHHhHHHHHHHHHHHH-----------------HHHH
Confidence 344444444555666655433222222 2333322 35789999999999989 9999
Q ss_pred hhhHHHHhhhccCC
Q psy11630 113 GGIAAGLISDMTGK 126 (169)
Q Consensus 113 ggiliG~Isd~~GW 126 (169)
|+.+.|.+.++..+
T Consensus 400 g~~i~g~~~~~~~~ 413 (485)
T TIGR00711 400 GTALITTILTNRTQ 413 (485)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999885444
No 155
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=94.34 E-value=0.14 Score=47.05 Aligned_cols=70 Identities=14% Similarity=0.167 Sum_probs=42.2
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.|+++.++-=++.|+--++ +.-++.++++|+.+.+ +++ -+.|++..==++ .-++|
T Consensus 99 p~f~~Ll~aR~~~g~a~G~-f~~i~~~~a~~lvpp~-----~~~--~Aiaiv~~G~tl-----------------A~v~G 153 (394)
T COG2814 99 PSFAVLLLARALAGLAHGV-FWSIAAALAARLVPPG-----KRG--RALALVFTGLTL-----------------ATVLG 153 (394)
T ss_pred ccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCcc-----chh--hHHHHHHHHHHH-----------------HHHHh
Confidence 4455444444456655444 3344568999998753 333 333444322233 45668
Q ss_pred hhHHHHhhhccCCcH
Q psy11630 114 GIAAGLISDMTGKSA 128 (169)
Q Consensus 114 giliG~Isd~~GW~a 128 (169)
-.+..++.|.+|||+
T Consensus 154 vPLGt~ig~~~GWR~ 168 (394)
T COG2814 154 VPLGTFLGQLFGWRA 168 (394)
T ss_pred ccHHHHHHHHhhHHH
Confidence 888899999999994
No 156
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=94.34 E-value=0.19 Score=44.10 Aligned_cols=19 Identities=21% Similarity=0.017 Sum_probs=14.8
Q ss_pred chhhhhhHHHHhhhccCCc
Q psy11630 109 GGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~ 127 (169)
|.++|+++.|.+....+|.
T Consensus 142 G~~ig~~l~g~l~~~~~~~ 160 (418)
T TIGR00889 142 GFIAAMWAVSLLDIELSNI 160 (418)
T ss_pred HHHHHHHHHHHhcccchhH
Confidence 8889999999885544565
No 157
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=94.28 E-value=0.15 Score=42.05 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=26.2
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a 128 (169)
..+++.|+.+...+. ++.+.+.++|.+.+..+|..
T Consensus 332 ~~g~~~~~~~~~~~~-----------------~g~i~~~~~~~~~~~~~~~~ 366 (385)
T TIGR00710 332 VAGTASALFGTLRLV-----------------LGAIVGYLVSLIHGNTAWPM 366 (385)
T ss_pred cchHHHHHHHHHHHH-----------------HHHHHHHHHHhccccChHHH
Confidence 468889998888887 66676777887777666763
No 158
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.17 E-value=0.27 Score=44.19 Aligned_cols=99 Identities=23% Similarity=0.337 Sum_probs=59.4
Q ss_pred HHHHHHHhhcC--CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccC
Q psy11630 23 TELFIYQLLGA--TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSG 100 (169)
Q Consensus 23 ~~l~~y~~~~~--~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~ 100 (169)
.+.+.+..++. .+.....+++++..+.+.--+-+.. +...|...++ ++..+---+.+.++-++
T Consensus 71 ~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aD-a~vvE~~~~~-----p~~~g~lqS~~~~~~~~--------- 135 (433)
T PF03092_consen 71 VSALVLALLPASESSAAIAVVLLFLASFGYAFADVAAD-ALVVELARRE-----PESRGDLQSFVWGVRSV--------- 135 (433)
T ss_pred HHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhh-HHHHHHhhcC-----CchhHHHHHHHHHHHHH---------
Confidence 34555665555 3445555666666666655555554 4556665544 33344444555555666
Q ss_pred CcchhhccchhhhhhHHHHhhhccCCc------HHHHHHHHHhHHhhhhh
Q psy11630 101 DLATVFDIGGIFGGIAAGLISDMTGKS------ASVCATMLVLSIPMKQK 144 (169)
Q Consensus 101 ~LS~~~DvGaaiggiliG~Isd~~GW~------a~~c~~mlll~~~~~e~ 144 (169)
|++++..+.|.+.+..+++ +....++++.+..+.|.
T Consensus 136 --------G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 136 --------GSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred --------HHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 8889999999999988776 33444555555555554
No 159
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=94.15 E-value=0.24 Score=42.85 Aligned_cols=69 Identities=16% Similarity=0.060 Sum_probs=43.0
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
++++...+.+++.|++.+.-..... +..++..++ +...|.+.|+.+....+ |..++
T Consensus 291 ~~~~~~~~~~~~~G~~~g~~~~~~~-~~~q~~~~~------~~~~g~~~a~~~~~~~~-----------------~~~~~ 346 (393)
T PRK11195 291 HSLLPAYPLLILIGALGGFFVVPMN-ALLQHRGHV------LVGAGHSIAVQNFNENL-----------------AMLLM 346 (393)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhHH-HHHHhhCcc------cccchhHHHHHhHHHHH-----------------HHHHH
Confidence 3444455556667776544222232 234554432 23479999999988888 88888
Q ss_pred hhHHHHhhhccCCc
Q psy11630 114 GIAAGLISDMTGKS 127 (169)
Q Consensus 114 giliG~Isd~~GW~ 127 (169)
..+.+.+ +.+|=+
T Consensus 347 ~~~~~~~-~~~~~~ 359 (393)
T PRK11195 347 LGLYSLL-VKLGVP 359 (393)
T ss_pred HHHHHHH-HHcCCC
Confidence 8888855 667766
No 160
>PRK10429 melibiose:sodium symporter; Provisional
Probab=94.08 E-value=0.49 Score=42.10 Aligned_cols=9 Identities=33% Similarity=0.379 Sum_probs=6.4
Q ss_pred CcCCCCCCC
Q psy11630 2 TRLGLKPPT 10 (169)
Q Consensus 2 ~~~g~~~~~ 10 (169)
+|.|||.|-
T Consensus 71 sr~Grrrp~ 79 (473)
T PRK10429 71 SRWGKFKPW 79 (473)
T ss_pred CCCCCcchh
Confidence 377997665
No 161
>PRK09669 putative symporter YagG; Provisional
Probab=93.91 E-value=0.37 Score=42.10 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=17.3
Q ss_pred hhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccc
Q psy11630 47 GSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSI 91 (169)
Q Consensus 47 Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi 91 (169)
.-++.-||. +...|+.+.+ +--...+++..+.+.+
T Consensus 123 ~t~~~ip~~----al~~~~t~~~------~eR~~l~~~r~~~~~~ 157 (444)
T PRK09669 123 YTAINVPYC----AMPGAITNDP------RERHSLQSWRFALSFI 157 (444)
T ss_pred HHhhcchHH----HhHHHhcCCH------HHHHHHHHHHHHHHHH
Confidence 335666765 3455664321 2223445555555556
No 162
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=93.70 E-value=0.28 Score=45.55 Aligned_cols=24 Identities=13% Similarity=0.199 Sum_probs=14.3
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHH
Q psy11630 3 RLGLKPPTSRSKVQRVNHYTTELFIYQ 29 (169)
Q Consensus 3 ~~g~~~~~~~~~v~~l~~~~~~l~~y~ 29 (169)
|.|||.|. -+........+++.+.
T Consensus 69 r~GRRrp~---il~g~~~~~~~l~ll~ 92 (477)
T TIGR01301 69 RFGRRRPF---IAAGAALVAFAVILIG 92 (477)
T ss_pred CCCChHHH---HHHHHHHHHHHHHHHH
Confidence 69999888 4444444444444443
No 163
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=93.53 E-value=0.45 Score=44.76 Aligned_cols=82 Identities=21% Similarity=0.193 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhc---chHHHHHHHHhhhccccccccCCcchhhhhhhhhccccccc
Q psy11630 16 QRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVN---GPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIA 92 (169)
Q Consensus 16 ~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~---GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~ 92 (169)
+.+.++....+.+-+. .+++...+++++-|+|-. .|..- .++.=.. +|.-|+..|+-|..=++
T Consensus 99 ~gLilsai~nil~Gfs--~s~~~~~~l~~lng~fQg~Gwpp~~~---~i~~Wfs--------r~eRG~~~siWn~shNi- 164 (448)
T COG2271 99 FGLILSAIVNILFGFS--PSLFLFAVLWVLNGWFQGMGWPPCAR---TITHWFS--------RKERGTWWSIWNTSHNI- 164 (448)
T ss_pred HHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhcCCCcHHHH---HHHHHcC--------ccccCceEEEehhhhhc-
Confidence 4444444444444432 378888888889999853 23211 1222222 34578888888888888
Q ss_pred ccCccccCCcchhhccchhhhhhHH--HHhhhccCCc
Q psy11630 93 SLSNTLSGDLATVFDIGGIFGGIAA--GLISDMTGKS 127 (169)
Q Consensus 93 ~~~~~~a~~LS~~~DvGaaiggili--G~Isd~~GW~ 127 (169)
|+++.++++ +++.++++|+
T Consensus 165 ----------------GGal~~~~~~la~~~~~~~w~ 185 (448)
T COG2271 165 ----------------GGALAPLVALLAFFAFHGGWR 185 (448)
T ss_pred ----------------ccchHHHHHHHHHHHhccchh
Confidence 999999999 9999999999
No 164
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=93.36 E-value=0.16 Score=45.43 Aligned_cols=93 Identities=17% Similarity=0.120 Sum_probs=53.8
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhh-cCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLL-GATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~-~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
+|.|+|... +..+.+....++.+... ..++.+.....+++.|+.......... ....+..+ ++-.++
T Consensus 320 ~r~g~~~~~----~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~-~~~~~~~~-------~~~~g~ 387 (495)
T PRK14995 320 SRLGLRLVA----TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLAST-SAIMAAAP-------PEKAAA 387 (495)
T ss_pred HHcCchHHH----HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHH-HHHHhcCC-------HHhcch
Confidence 566665433 22333333333333222 233444445566677877666554443 34444444 245777
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM 123 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~ 123 (169)
++|+.+.+-.+ |+++|..+.|.+.+.
T Consensus 388 ~~~~~~~~~~l-----------------G~~~G~ai~g~i~~~ 413 (495)
T PRK14995 388 AGAIETMAYEL-----------------GAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHHHH
Confidence 88888888888 988988888888663
No 165
>KOG0569|consensus
Probab=93.19 E-value=0.31 Score=45.78 Aligned_cols=83 Identities=16% Similarity=0.219 Sum_probs=44.4
Q ss_pred HHHHHHHhhhhc-chHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHH
Q psy11630 40 IVLLLLLGSLVN-GPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAG 118 (169)
Q Consensus 40 ~~ll~l~Gffi~-GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG 118 (169)
.++++.+.|-++ ||-.-+ +.+||.+|. .+-|+..++++++-+..+ +-+..-+
T Consensus 373 ~~~~~~~~f~~G~gpi~~f---i~aELf~~~----~R~aa~s~~~~~~w~~~f--------------------iv~~~fp 425 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWF---IGAELFPQS----ARSAAQSVATAVNWLSNF--------------------IVGFAFP 425 (485)
T ss_pred HHHHHHHhhhcCCCchhHH---HHHHhCCcc----chHHHHHHHHHHHHHHHH--------------------HHHHHHH
Confidence 334445555555 664444 577998763 344555667777766655 4566666
Q ss_pred HhhhccC-CcHHHHHHHHHhHHhhhhhcccch
Q psy11630 119 LISDMTG-KSASVCATMLVLSIPMKQKGNQEA 149 (169)
Q Consensus 119 ~Isd~~G-W~a~~c~~mlll~~~~~e~~~~~~ 149 (169)
.+.+.+| +--...++.+.+...+-...-+|.
T Consensus 426 ~l~~~~g~~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 426 PLQNVIGPYVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHhcchhhHHHHHHHHHHHHHHHHhCccc
Confidence 7777676 443333333333333333333333
No 166
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=92.80 E-value=0.67 Score=42.61 Aligned_cols=97 Identities=21% Similarity=0.240 Sum_probs=57.7
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhh
Q psy11630 3 RLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVT 82 (169)
Q Consensus 3 ~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvt 82 (169)
|+-.| ..+|.-+..+.+....++.+.+. +.+.+.....+++.||.+..+.-.... ..++.. .++..++.
T Consensus 269 rl~dr-~~~~~l~~~~~l~a~~~l~l~~~-~~~~~~~~~~~~~wg~a~~~~~~~~~~-~~a~~~--------p~~~~~a~ 337 (394)
T COG2814 269 RLADR-GPRRALIAALLLLALALLALTFT-GASPALALALLFLWGFAFSPALQGLQT-RLARLA--------PDAADLAG 337 (394)
T ss_pred hhccc-cchhHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHhhhhhhHHHH-HhcccC--------CCchHHHH
Confidence 44455 22233334434444555554443 344555666666677766555333322 222222 25677777
Q ss_pred hhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 83 SIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 83 giIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
++....=++ |-++|..+.|.+.|++|+.
T Consensus 338 sl~~aa~nl-----------------gia~GA~lGG~v~~~~g~~ 365 (394)
T COG2814 338 SLNVAAFNL-----------------GIALGAALGGLVLDALGYA 365 (394)
T ss_pred HHHHHHHHH-----------------HHHHHHHHHHHHHHhhchH
Confidence 777766666 9899999999999999988
No 167
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=92.77 E-value=0.54 Score=46.10 Aligned_cols=65 Identities=12% Similarity=-0.042 Sum_probs=45.2
Q ss_pred CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhh
Q psy11630 34 TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG 113 (169)
Q Consensus 34 ~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig 113 (169)
.+.+..++.+++.|++........ .+..++..+ ++-.|.+.|+.+.+.++ |.+++
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p-------~~~~G~v~g~~~~~~~~-----------------~~~ig 386 (1140)
T PRK06814 332 RHGWRILIDLFGLAAAGGLYIVPL-FAALQAWAN-------PAHRARVIAANNVLNAA-----------------FMVAG 386 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHH-HHHHHhhCC-------cccceeeeHHHHHHHHH-----------------HHHHH
Confidence 344445555666776654443333 356666655 35788999999999888 99999
Q ss_pred hhHHHHhhhc
Q psy11630 114 GIAAGLISDM 123 (169)
Q Consensus 114 giliG~Isd~ 123 (169)
++++|.+.+.
T Consensus 387 ~~~~g~l~~~ 396 (1140)
T PRK06814 387 TIILALLQAL 396 (1140)
T ss_pred HHHHHHHHHh
Confidence 9999999863
No 168
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=92.44 E-value=0.049 Score=43.92 Aligned_cols=49 Identities=24% Similarity=0.226 Sum_probs=32.9
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccc
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSI 91 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi 91 (169)
+.....+.+++.|+ ..+..+....+...|..+ ++-.|++.|+.+..+++
T Consensus 298 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~ 346 (352)
T PF07690_consen 298 SPVWLIIALFLIGF-GFGIVFPILFSLIQELVP-------PEYRGTAFGLFNSIGSL 346 (352)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCHHHHHHHHCCCH-------TCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCC-------HHHHHHHHHHHHHHHHH
Confidence 34445556667888 444444444456777765 35889999999988888
No 169
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=92.35 E-value=0.0056 Score=52.55 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=41.6
Q ss_pred CCcCCCCCCCCcchHHHHHHHHHHHHHHHhhcC-CcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhh
Q psy11630 1 MTRLGLKPPTSRSKVQRVNHYTTELFIYQLLGA-TSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALA 79 (169)
Q Consensus 1 ~~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~-~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~a 79 (169)
.||.|||... .+...+.+.+.++..+.+. .+.+..++.-++.|+.+++=+... .+...|..+. |--+
T Consensus 70 ~d~~GRk~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~-~~~~~E~~~~-------~~R~ 137 (451)
T PF00083_consen 70 ADRYGRKPAL----IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS-PIYISEIAPP-------KHRG 137 (451)
T ss_pred cccccccccc----cccccccccccccccccccccccccccccccccccccccccccc-cccccccccc-------cccc
Confidence 3899999666 3333333333333332221 145555555668888877755555 3455676553 2224
Q ss_pred hhhhhhcccccc
Q psy11630 80 TVTSIIDGTGSI 91 (169)
Q Consensus 80 tvtgiIdg~Gsi 91 (169)
....+.+..-.+
T Consensus 138 ~~~~~~~~~~~~ 149 (451)
T PF00083_consen 138 FLSSLFQLFWAL 149 (451)
T ss_pred cccccccccccc
Confidence 555555544444
No 170
>KOG2615|consensus
Probab=92.28 E-value=0.29 Score=45.97 Aligned_cols=88 Identities=25% Similarity=0.391 Sum_probs=49.0
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCc-HHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATS-LTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~-~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
||.||||-. .++ +.++.++.++.+.+ ...+.++-=.+|=...|-..++. |+..|....| .+.++.
T Consensus 93 D~yGRkpvl----l~c----~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~r-AiisdV~sek---~r~l~m-- 158 (451)
T KOG2615|consen 93 DRYGRKPVL----LAC----LIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIR-AIISDVVSEK---YRPLGM-- 158 (451)
T ss_pred hhhCchHHH----HHH----HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHH-HHHHhhcChh---hcccee--
Confidence 788998755 233 33333332222222 22222221134556677788885 7899997742 233333
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
+.+ ++.|-+|.++|+.+.|++++
T Consensus 159 --s~v-----------------~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 159 --SLV-----------------GTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred --eee-----------------ehhhhcchhhcchhhhHHHh
Confidence 223 33444599999999999988
No 171
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=92.12 E-value=0.67 Score=44.90 Aligned_cols=67 Identities=22% Similarity=0.154 Sum_probs=41.7
Q ss_pred cHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhh
Q psy11630 35 SLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 35 ~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
+.+..++.+++.|++......... +...+..+ ++..|++.|+.+.+.++ |++++.
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~p-------~~~rg~~~~~~~~~~~l-----------------g~~~~~ 375 (1146)
T PRK08633 321 SLASVLVLFFLFGFSAGLFIVPLN-ALIQFRAP-------EKELGKVLAANNFLQNV-----------------GMLLFL 375 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHH-HHHhhcCC-------ccchhhhhHHHHHHHHH-----------------HHHHHH
Confidence 455555666677777665444443 34455544 35778888988888888 777666
Q ss_pred hHHHHhhhccCCc
Q psy11630 115 IAAGLISDMTGKS 127 (169)
Q Consensus 115 iliG~Isd~~GW~ 127 (169)
.+.+.+.. +++.
T Consensus 376 ~~~~~l~~-~~~~ 387 (1146)
T PRK08633 376 ALTTLFSG-LGLS 387 (1146)
T ss_pred HHHHHHHH-hccC
Confidence 65555543 4443
No 172
>PF13347 MFS_2: MFS/sugar transport protein
Probab=91.96 E-value=0.42 Score=41.51 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=15.9
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQL 30 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~ 30 (169)
||.|||-|- -++.......+.+..+.
T Consensus 66 tr~Grrrp~---~l~g~i~~~~~~~llf~ 91 (428)
T PF13347_consen 66 TRWGRRRPW---ILIGAILLALSFFLLFS 91 (428)
T ss_pred ccccccceE---eehhhHHHHHHHHHhhc
Confidence 589999888 55554444444444443
No 173
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=91.94 E-value=0.55 Score=40.08 Aligned_cols=19 Identities=21% Similarity=-0.015 Sum_probs=17.1
Q ss_pred chhhhhhHHHHhhhccCCc
Q psy11630 109 GGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~ 127 (169)
|.++|+++.|++.|++|+.
T Consensus 341 g~~~g~~~~G~l~~~~g~~ 359 (382)
T TIGR00902 341 LIAIFTAFAGFIYPTLGAG 359 (382)
T ss_pred HHHHHHHHHHHHHHhccHH
Confidence 7788999999999999876
No 174
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=91.88 E-value=0.52 Score=43.93 Aligned_cols=33 Identities=39% Similarity=0.661 Sum_probs=30.9
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG 125 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G 125 (169)
+..|.|+|+|.-+|.+ ||-+=+...|...|.+|
T Consensus 345 ~~~G~v~G~vga~G~l-----------------GGf~lp~~~g~~~~~tg 377 (417)
T COG2223 345 KETGAVTGIVGAIGGL-----------------GGFFLPLAFGVSLDLTG 377 (417)
T ss_pred hhhhHHHHHHHHhccc-----------------cccchhHHHHHHHHhcc
Confidence 5889999999999999 99888999999999999
No 175
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=91.85 E-value=0.51 Score=40.16 Aligned_cols=19 Identities=11% Similarity=0.158 Sum_probs=17.0
Q ss_pred chhhhhhHHHHhhhccCCc
Q psy11630 109 GGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~ 127 (169)
|.++|+++.|++.|.+|+.
T Consensus 341 g~~ig~~i~G~l~~~~g~~ 359 (382)
T PRK11128 341 SIAIMTVLSGFLYQHLGAG 359 (382)
T ss_pred HHHHHHHHHHHHHHhccHH
Confidence 6678999999999999886
No 176
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=91.35 E-value=1.2 Score=38.61 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=18.5
Q ss_pred cchhhhhhHHHHhhhccCCcH
Q psy11630 108 IGGIFGGIAAGLISDMTGKSA 128 (169)
Q Consensus 108 vGaaiggiliG~Isd~~GW~a 128 (169)
.|.++|+.+.|++.|.+|+..
T Consensus 351 lg~~~G~~l~G~l~~~~g~~~ 371 (394)
T PRK10213 351 LANTCGAAIGGYALDNIGLTS 371 (394)
T ss_pred HHHHHHHHHHHHHHhccChhh
Confidence 388999999999999998874
No 177
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=90.98 E-value=0.78 Score=40.39 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=35.5
Q ss_pred HHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHH
Q psy11630 40 IVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGL 119 (169)
Q Consensus 40 ~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~ 119 (169)
...++++|+|..+=+-.+-+.....++++ .....++++-+. + |+++.+.+.|+
T Consensus 325 ~~~l~~~glf~s~~fp~i~sl~~~~~g~~--------~~~~s~~l~~~~--~-----------------Gga~~p~l~G~ 377 (410)
T TIGR00885 325 LYCLTLCSAFMSLMFPTIYGIALKGLGQD--------TKYGAAGLVMAI--I-----------------GGGIVPPLQGF 377 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhh--------hhhhHHHHHHHH--h-----------------ccchHHHHHHH
Confidence 45566777776555555554444555543 222233333322 6 99999999999
Q ss_pred hhhcc
Q psy11630 120 ISDMT 124 (169)
Q Consensus 120 Isd~~ 124 (169)
+.|..
T Consensus 378 ~~d~~ 382 (410)
T TIGR00885 378 IIDMK 382 (410)
T ss_pred HHHHh
Confidence 99954
No 178
>PTZ00207 hypothetical protein; Provisional
Probab=90.50 E-value=0.26 Score=47.15 Aligned_cols=94 Identities=18% Similarity=0.170 Sum_probs=51.1
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhc----CCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcch
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLG----ATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKA 77 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~----~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA 77 (169)
||+|+|.-. .+.++....+.+..++.. ..+.+..++..++.|+.. ++.+........+.-+ +-
T Consensus 86 Dr~G~R~vl----lig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~-~~~~~~~~~~i~~~Fp--------~~ 152 (591)
T PTZ00207 86 DYLGPRPIF----VLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGC-MLFDLGAVVTVLSVFP--------SN 152 (591)
T ss_pred HHhCcHHHH----HHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCh--------hh
Confidence 567766554 233333333333333321 135665555565666442 3333332233344333 22
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhh-hhhHHHHhhhccCCc
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIF-GGIAAGLISDMTGKS 127 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaai-ggiliG~Isd~~GW~ 127 (169)
-|++.|+..++..+ |+++ +++..+++.+ +|+
T Consensus 153 RG~a~Gi~~~~~gL-----------------GsaI~~~l~~~l~~~--~~~ 184 (591)
T PTZ00207 153 RGAVVAIMKTFTGL-----------------GSAILGSIQLAFFSD--NTS 184 (591)
T ss_pred hHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH--hHH
Confidence 38899999999888 8875 7777777775 455
No 179
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=90.22 E-value=0.86 Score=43.21 Aligned_cols=59 Identities=17% Similarity=0.215 Sum_probs=40.0
Q ss_pred HHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHh
Q psy11630 41 VLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLI 120 (169)
Q Consensus 41 ~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~I 120 (169)
+.-++.|+... |.+.++.+...|..++ +..+...|+......+ |.++|.++.|++
T Consensus 177 ~~r~l~GiG~~-~~~~~~~~~i~d~~~~-------~~~~~~~~i~~~~~~i-----------------G~~lG~llgg~l 231 (633)
T TIGR00805 177 VSQLLRGIGAT-PIFPLGISYIDDFAKS-------KNSPLYIGILESIAVF-----------------GPAFGYLLGSFC 231 (633)
T ss_pred HHHHHHhccCC-cchhcCchhhhccCCc-------cccHHHHHHHHHHHHh-----------------hhHHHHHHHHHH
Confidence 33456665544 4444445666777653 4677788888888888 888999988988
Q ss_pred hhcc
Q psy11630 121 SDMT 124 (169)
Q Consensus 121 sd~~ 124 (169)
.+.+
T Consensus 232 ~~~~ 235 (633)
T TIGR00805 232 LQIY 235 (633)
T ss_pred Hhcc
Confidence 8654
No 180
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=89.71 E-value=2.4 Score=39.75 Aligned_cols=64 Identities=25% Similarity=0.324 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhH
Q psy11630 37 TMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIA 116 (169)
Q Consensus 37 ~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggil 116 (169)
...+..++++|+|...=+--|-+.+...+++|. .++|-+=-++.+ ||++-+++
T Consensus 325 ~v~~~~l~~ig~F~simfPTIfslal~~l~~~t----------s~~s~~l~maiv-----------------GGAiiP~l 377 (422)
T COG0738 325 VVALYALFLIGLFNSIMFPTIFSLALKNLGEHT----------SVGSGLLVMAIV-----------------GGAIIPPL 377 (422)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccc----------cccceeeeehee-----------------cchHHHHH
Confidence 334555678999998888888776666676543 233334445666 99999999
Q ss_pred HHHhhhccCCc
Q psy11630 117 AGLISDMTGKS 127 (169)
Q Consensus 117 iG~Isd~~GW~ 127 (169)
.|+++|++|-.
T Consensus 378 ~G~i~d~~g~~ 388 (422)
T COG0738 378 QGVIADMFGIQ 388 (422)
T ss_pred HHHHHHhhhhH
Confidence 99999998876
No 181
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=89.64 E-value=1.5 Score=41.14 Aligned_cols=95 Identities=25% Similarity=0.306 Sum_probs=63.6
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
+|+|-|+-. -+..+...+..+.++.. .....+.+ +=+++|++++|-|+..- +.-+++.+++ -.+.-
T Consensus 313 ~rfg~k~vl---~~~lvi~~~~~~~~~~~--~~~~~f~i-~gll~g~s~G~~qA~SR-Sy~~~lvp~~-------k~~~f 378 (438)
T COG2270 313 ERFGSKPVL---MIGLVILSIAALYLIFL--EGELDFWI-LGLLVGTSLGGAQASSR-SYLARLVPKG-------KEGRF 378 (438)
T ss_pred HHhCCceee---hHHHHHHHHHHHHHHHc--cccHHHHH-HHHHHHHhcchHHHHHH-HHHHHhCCCc-------cccce
Confidence 577777444 33333334444444443 23222221 11478999999898886 5677777754 45677
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
=|+-+-+|-. ...+|+.+.+.++|.+|-.
T Consensus 379 Fglyaltgra-----------------~S~~gp~lv~v~t~iTg~~ 407 (438)
T COG2270 379 FGLYALTGRA-----------------ASFLGPFLVAVITQITGSS 407 (438)
T ss_pred eehhhhhhhH-----------------HHHHHHHHHHHHHHHhcch
Confidence 8899999998 8899999999999999865
No 182
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=89.24 E-value=1.1 Score=41.76 Aligned_cols=96 Identities=18% Similarity=0.115 Sum_probs=60.8
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
||.|-|--. ....+...+|.+..-+.....+++..+++=+++| +.|-.+-++-.-+...=+ ++-.|+|
T Consensus 74 drfGgR~~~---~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G--~~GasFav~m~~~s~~fP-------~~~qG~A 141 (417)
T COG2223 74 DRFGGRKWT---ILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLG--LAGASFAVGMPNASFFFP-------KEKQGLA 141 (417)
T ss_pred cccCchHHH---HHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHh--cccceehcccccccccCC-------hhhhhHH
Confidence 566666555 5555666777777666554555443333223333 223222222222222223 5678999
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC---Cc
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG---KS 127 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G---W~ 127 (169)
.||-+ .|++ |.++.|.+.+++....| |+
T Consensus 142 lGI~g-~GN~-----------------G~av~q~~~P~v~~~~g~~~w~ 172 (417)
T COG2223 142 LGIAG-AGNL-----------------GVAVAQLVAPLVAVAFGFLAWR 172 (417)
T ss_pred HHHhc-cccc-----------------cHHHHHHHHHHHHHHHhhHHHH
Confidence 99988 9999 99999999999999999 77
No 183
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=87.99 E-value=1.5 Score=41.19 Aligned_cols=47 Identities=30% Similarity=0.374 Sum_probs=24.0
Q ss_pred cHHHHHHHHHHHhh---hhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccc
Q psy11630 35 SLTMSIVLLLLLGS---LVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSI 91 (169)
Q Consensus 35 ~~~~~~~ll~l~Gf---fi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi 91 (169)
+..+.++...+.+. +++-||.-+.+..+.|-. --...++.--.++++
T Consensus 111 k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~----------ER~~l~s~R~~~~~~ 160 (467)
T COG2211 111 KLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ----------ERASLTSWRMVFASL 160 (467)
T ss_pred chHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH----------HHHHHHHHHHHHHHH
Confidence 34555554444444 456777655554444443 334445555555555
No 184
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=87.55 E-value=1.2 Score=39.42 Aligned_cols=50 Identities=26% Similarity=0.307 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccc
Q psy11630 36 LTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSI 91 (169)
Q Consensus 36 ~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi 91 (169)
.....++-|+.|+|.||=|..+ ..+ +||--++|+|-.|+--|+|=|+||+
T Consensus 204 ~~~f~I~~Fl~G~f~WgiQ~Vi-----L~l-PhEyK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 204 FAFFYIFGFLAGFFLWGIQGVI-----LNL-PHEYKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred HHHHHHHHHHHHHHHHhhhHHH-----hcC-hhhhcCCCcceehhHHHHHHHHHHH
Confidence 3344555579999999976544 233 7777788999999999999999999
No 185
>KOG0253|consensus
Probab=87.51 E-value=0.35 Score=45.90 Aligned_cols=89 Identities=19% Similarity=0.267 Sum_probs=54.6
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATV 81 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atv 81 (169)
+|+|||.-+ +.....++++.+..+.. .+...+.+++|..-+||-|-+-..- +-+-|.=+ .+.-+|.
T Consensus 406 erlGRKkTM---al~l~~f~iflfll~~c---~~rn~~tvllf~arafisg~fqvaY-vYtPEVyP-------TavRatg 471 (528)
T KOG0253|consen 406 ERLGRKKTM---ALSLILFGIFLFLLTTC---KTRNAYTVLLFTARAFISGAFQVAY-VYTPEVYP-------TAVRATG 471 (528)
T ss_pred HHhcchhHH---HHHHHHHHHHHHHHHHh---cCcchhHHHHHHHHHHHhchheEEE-EecCcccc-------hhhhhcc
Confidence 699999888 66666666555555553 3444455666677777766542221 12233322 3455666
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
.|.-.+++-| ||++.+.++ +..+
T Consensus 472 vGtcSsmaRI-----------------ggI~~p~iA-~~~e 494 (528)
T KOG0253|consen 472 VGTCSSMARI-----------------GGIFSPVIA-MRAE 494 (528)
T ss_pred hhhhhhHHhh-----------------hhhhhhHHH-HHhc
Confidence 7777788888 888888777 4443
No 186
>KOG2504|consensus
Probab=87.08 E-value=2.1 Score=40.00 Aligned_cols=35 Identities=17% Similarity=0.034 Sum_probs=25.9
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
|=.+.|+|+.-.=..+ |..+=+.+.-++.+.+||+
T Consensus 166 kkR~lA~Gia~~GsG~-----------------G~~~~~~l~~~l~~~~G~r 200 (509)
T KOG2504|consen 166 KKRALATGIAVSGTGV-----------------GTVVFPPLLKYLLSKYGWR 200 (509)
T ss_pred HHHHHHHhhhhccCCc-----------------ceeeHHHHHHHHHHHhCcH
Confidence 4456666666654556 7777888888899999999
No 187
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=85.02 E-value=2.9 Score=39.18 Aligned_cols=65 Identities=25% Similarity=0.228 Sum_probs=30.0
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHh--hhhcchHHHHHHHHhhhcccccc
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLG--SLVNGPYALITTAVSAELGTHEC 70 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~G--ffi~GP~~Li~~a~a~dlg~~~~ 70 (169)
||..||.-+--+.+++.. ....+......+..+.+..+++.|+.| .-++.|.. .+.-.|+.+++.
T Consensus 70 Dr~drrrili~~~~~~~~-~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~---~A~ip~lV~~~~ 136 (524)
T PF05977_consen 70 DRFDRRRILILSQLLRAL-VALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAW---QAIIPELVPKED 136 (524)
T ss_pred hcccchHHHHHHHHHHHH-HHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhccHhh
Confidence 666666554111112211 122222333345566665555544444 44555643 234567777653
No 188
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=84.48 E-value=0.1 Score=44.82 Aligned_cols=43 Identities=23% Similarity=0.176 Sum_probs=34.4
Q ss_pred HhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC-Cc
Q psy11630 61 VSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG-KS 127 (169)
Q Consensus 61 ~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G-W~ 127 (169)
...|+-+. +.-+++.|+....+.+ ++++++.+.+.+.+..+ |.
T Consensus 373 ~~~ElfPt-------~~R~~~~~~~~~~~~i-----------------~~~i~~~~~~~~~~~~~~~~ 416 (451)
T PF00083_consen 373 YTAELFPT-------KVRSTGIGLSYAVGRI-----------------GGFIIPFLFPYLFNNLGGWG 416 (451)
T ss_pred cccccccc-------cccccccccccccccc-----------------cccccccccccccccccccc
Confidence 55777653 4668888999999999 99999999999988776 54
No 189
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=84.27 E-value=12 Score=32.77 Aligned_cols=57 Identities=12% Similarity=-0.052 Sum_probs=33.8
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH-----HHHHHHHHhHHhhhhhcccchhhh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA-----SVCATMLVLSIPMKQKGNQEAEQD 152 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a-----~~c~~mlll~~~~~e~~~~~~~~~ 152 (169)
.|++.|+.+..... +..+++...|++.++ +-++ .+++..++.....++.+++++++-
T Consensus 345 ~G~a~a~~~~~~~~-----------------~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (413)
T PRK15403 345 KGTVSASLNMVILM-----------------VMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVVFTLAGLLNRVRQHQA 406 (413)
T ss_pred CcHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 58888888777776 677788888888664 3231 222233344445555555555443
No 190
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=83.31 E-value=3.3 Score=34.37 Aligned_cols=16 Identities=13% Similarity=-0.062 Sum_probs=9.9
Q ss_pred chhhhhhhhhcccccc
Q psy11630 76 KALATVTSIIDGTGSI 91 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi 91 (169)
+..+++.++.+...+.
T Consensus 318 ~~~g~~~~~~~~~~~~ 333 (377)
T PRK11102 318 HMAGTASSLAGTLRFG 333 (377)
T ss_pred ccchHHHHHHHHHHHH
Confidence 4567777776655543
No 191
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=83.06 E-value=10 Score=35.12 Aligned_cols=86 Identities=10% Similarity=-0.025 Sum_probs=53.3
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhcccccccc---------
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLE--------- 72 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~--------- 72 (169)
|+-|+|.+. -.++...+..+.+.+++.++..++ ...+++.++-..++-......+.--|+.+++...
T Consensus 95 D~~~~Rk~~---l~~~~~~~~~~~~~l~~v~~~~~~-~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~ 170 (477)
T PF11700_consen 95 DYGGRRKRF---LLIFTLLGVLATALLWFVSPGQWW-LALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSAN 170 (477)
T ss_pred cccccchHH---HHHHHHHHHHHHHHHHHhCcchHH-HHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhcc
Confidence 566777666 555656666666666666555554 4444556666666666666667777887765330
Q ss_pred ----------CCcchhhhhhhhhcccccc
Q psy11630 73 ----------GNSKALATVTSIIDGTGSI 91 (169)
Q Consensus 73 ----------~n~kA~atvtgiIdg~Gsi 91 (169)
.++...+.++|.=-+.||+
T Consensus 171 ~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~ 199 (477)
T PF11700_consen 171 GNISDSEYEAVDSLTRGRVSGLGWALGYI 199 (477)
T ss_pred CCCChhhhhhHHHhhhchhHHHHHHHHHH
Confidence 0001118889999999999
No 192
>KOG2532|consensus
Probab=80.07 E-value=4.3 Score=37.62 Aligned_cols=19 Identities=26% Similarity=0.379 Sum_probs=17.9
Q ss_pred chhhhhhHHHHhhhc-cCCc
Q psy11630 109 GGIFGGIAAGLISDM-TGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~-~GW~ 127 (169)
|.+++.++.|++.+. +||+
T Consensus 176 g~v~~mp~sg~lc~s~~GW~ 195 (466)
T KOG2532|consen 176 GTIITMPVSGLLCESSLGWP 195 (466)
T ss_pred HHHHHHHhHHHHhccCCCCc
Confidence 888999999999998 9999
No 193
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=79.31 E-value=13 Score=33.48 Aligned_cols=67 Identities=21% Similarity=0.264 Sum_probs=45.7
Q ss_pred CcHHH--HHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchh
Q psy11630 34 TSLTM--SIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGI 111 (169)
Q Consensus 34 ~~~~~--~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaa 111 (169)
.+.++ ....++-+|..+..|.... ...++.+ ++.-|+..|+-..+.++ |..
T Consensus 379 ~s~~~~i~~~~~~~~ge~~~~p~~~~---~~~~~aP-------~~~~g~~~g~~~l~~~~-----------------g~~ 431 (475)
T TIGR00924 379 TSPWFMVLIYLFQTLGELMISPLGLS---WWTKIAP-------QRLMGQMLGMWFLAQAM-----------------GSL 431 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHH---HHHHhCC-------HHHHHHHHHHHHHHHHH-----------------HHH
Confidence 45543 3334456777777775443 3445554 35778888888877777 888
Q ss_pred hhhhHHHHhhhccCCc
Q psy11630 112 FGGIAAGLISDMTGKS 127 (169)
Q Consensus 112 iggiliG~Isd~~GW~ 127 (169)
+++.+.....+..||.
T Consensus 432 l~~~~~~~~~~~~~~~ 447 (475)
T TIGR00924 432 LGGYLATFGAVPQGVT 447 (475)
T ss_pred HHHHHHHHHhcccchh
Confidence 9999888888877777
No 194
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=77.84 E-value=2.2 Score=35.12 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=23.9
Q ss_pred ccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 96 NTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 96 ~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
+++.+.+...+-++.++++++.|.++|++|-+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r 67 (366)
T TIGR00886 36 TAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR 67 (366)
T ss_pred HHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch
Confidence 33444444445558999999999999999987
No 195
>KOG3764|consensus
Probab=77.38 E-value=8 Score=36.77 Aligned_cols=109 Identities=26% Similarity=0.300 Sum_probs=61.2
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHH--hhhhcchHHHHHHHHhhhccccccccCCcchhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLL--GSLVNGPYALITTAVSAELGTHECLEGNSKALA 79 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~--Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~a 79 (169)
+|.|+|-|+ ++.++....+-++|-+ ..++++..+.=.+= |.-. ....+-+..+|--+.+ +--|
T Consensus 131 ~~iGy~ipm----~~Gl~vmf~sTilFaf--g~sy~~l~vAR~LQgvgsA~---~~tsglamlAd~f~~d------~er~ 195 (464)
T KOG3764|consen 131 DRIGYKIPM----VAGLFVMFLSTILFAF--GNSYPMLFVARSLQGVGSAF---ADTSGLAMLADVFPED------NERG 195 (464)
T ss_pred HHhccccHH----HHHHHHHHHHHHHHHH--cchhHHHHHHHHHhhhhHHH---HHhhhHHHHHHHcccc------hhhh
Confidence 688999888 5555555555555544 24455332222222 2111 1122233445554432 2235
Q ss_pred hhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcH--HHHHHHHHhHHhhh
Q psy11630 80 TVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSA--SVCATMLVLSIPMK 142 (169)
Q Consensus 80 tvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a--~~c~~mlll~~~~~ 142 (169)
.|-|++-++-++ |-.+|+...|.+=|..|.++ .+|++.+++..++.
T Consensus 196 ~vmGialgfisl-----------------G~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~ 243 (464)
T KOG3764|consen 196 SVMGIALGFISL-----------------GVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQ 243 (464)
T ss_pred HHHHHHHHHHhc-----------------cceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHH
Confidence 666666666667 88899999999999999995 44555555444443
No 196
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=77.33 E-value=30 Score=31.09 Aligned_cols=67 Identities=16% Similarity=0.121 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccc
Q psy11630 15 VQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSI 91 (169)
Q Consensus 15 v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi 91 (169)
++.+...+..+..+.....++.+....++++..++......+.. +.+.+.-+++ ..-=|-+-..|++
T Consensus 70 ~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~d-si~~~~~~~~---------~~~YG~iRlwGSi 136 (400)
T PF03825_consen 70 ILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSD-SIALSYLGDR---------GKDYGRIRLWGSI 136 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHH-HHHHHHcccc---------cCCCCcchhhhhH
Confidence 34333333333333333345666666666666665554455555 4555543211 1223455666777
No 197
>KOG0252|consensus
Probab=77.08 E-value=3 Score=40.21 Aligned_cols=49 Identities=27% Similarity=0.310 Sum_probs=38.6
Q ss_pred hhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 49 LVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 49 fi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
.-+||-.-. .++.+|.-+ .+--+|.-||--..|-. ||++|...-.++.|
T Consensus 419 ~NFGPn~tt-fivpaE~FP-------arvR~t~hGIsAA~GK~-----------------GAivg~~~F~~~t~ 467 (538)
T KOG0252|consen 419 GNFGPNATT-FIVPAEIFP-------ARVRSTCHGISAASGKA-----------------GAIVGAFGFLYLTD 467 (538)
T ss_pred HhcCCCcee-EEeehhhch-------HHHhhhhhhHHHHhccc-----------------hHHHHHHHhhHhhh
Confidence 345666555 245666655 56889999999999999 99999999999999
No 198
>KOG0253|consensus
Probab=76.74 E-value=2.7 Score=40.08 Aligned_cols=103 Identities=17% Similarity=0.112 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhH
Q psy11630 37 TMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIA 116 (169)
Q Consensus 37 ~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggil 116 (169)
...+++=.+.||-++| +..+. +.=.|..+ +..+..=+|.. .++-+|.++...+
T Consensus 167 ~~L~~f~~l~~~g~gg-~pv~~-~~yle~lp-----~~~r~~~~V~~--------------------~~waig~v~ea~l 219 (528)
T KOG0253|consen 167 ASLCVFRALWGFGVGG-LPVDS-AIYLEFLP-----SSHRWLLTVMS--------------------FFWAIGQVFEALL 219 (528)
T ss_pred ehhhHHHHHHhccCCC-ccHhH-HHHHHhcc-----CcCCCcchhHH--------------------HHHHHHHHHHHHH
Confidence 3344444588888877 55553 45555543 33444444433 3445588787777
Q ss_pred HHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhhhhhcCCCCcccc
Q psy11630 117 AGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYKEHEANPENTIED 166 (169)
Q Consensus 117 iG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 166 (169)
.=.+..++|||+........+.+..+--.....+-+|.-+.-||+|.+|-
T Consensus 220 aw~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAlet 269 (528)
T KOG0253|consen 220 AWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALET 269 (528)
T ss_pred HHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHH
Confidence 65566778999543332221111112222223334466666777776654
No 199
>KOG0254|consensus
Probab=76.41 E-value=4 Score=36.91 Aligned_cols=59 Identities=25% Similarity=0.207 Sum_probs=36.4
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccc
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGT 67 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~ 67 (169)
||.|||.-. -+..+...+..++... +.++.+.++-=++.|+-+++-.++. .....|..+
T Consensus 114 d~~GRk~~l---~~~~~~~~iG~ii~~~---a~~~~~l~~GR~l~G~g~G~~~~~~-piy~sEiap 172 (513)
T KOG0254|consen 114 DRIGRKKTL---LLAVVLFLIGAIIIAL---APSWYQLIVGRILTGLGVGGASVLA-PVYISEIAP 172 (513)
T ss_pred HHhhhHHHH---HHHHHHHHHHHHHHHH---hhhHHHHHHHHHHhccchhhhhhcc-hhhHhhcCC
Confidence 678888666 3444444444444444 2356666665668888887776555 567778865
No 200
>KOG2816|consensus
Probab=76.14 E-value=6 Score=36.77 Aligned_cols=19 Identities=21% Similarity=0.433 Sum_probs=14.3
Q ss_pred chhhhhhHHHHhhhccCCc
Q psy11630 109 GGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~ 127 (169)
+..+++.+.+.+.+.+|--
T Consensus 160 ~~~~~p~~~~~~~~~~~~a 178 (463)
T KOG2816|consen 160 GLVIGPALGGYLVKFLGIA 178 (463)
T ss_pred HHhHHHHHHHHHHHhcCch
Confidence 5667888888888876654
No 201
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=75.62 E-value=20 Score=33.94 Aligned_cols=79 Identities=10% Similarity=0.048 Sum_probs=45.3
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHH-HHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMS-IVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~-~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
|+-|+|.|- --.+...-+++.+..|+.++.+.++. ++++.+.....-+-.-.- -+.-.|+.+ ++-.+-
T Consensus 83 D~~g~Rk~~---~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy-ds~L~~~~~-------k~~~~r 151 (438)
T COG2270 83 DYPGPRKKF---FGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY-DSMLPRLTT-------KDNMGR 151 (438)
T ss_pred ccCCCcchH---HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh-hhHhhhhcC-------ccccCc
Confidence 455666555 44555566666777777777454443 333433333332222111 234445555 456788
Q ss_pred hhhhhcccccc
Q psy11630 81 VTSIIDGTGSI 91 (169)
Q Consensus 81 vtgiIdg~Gsi 91 (169)
++|+-.++||+
T Consensus 152 iS~lg~~~gyl 162 (438)
T COG2270 152 ISGLGWALGYL 162 (438)
T ss_pred ccccccccccc
Confidence 89999999999
No 202
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=73.02 E-value=11 Score=32.16 Aligned_cols=61 Identities=15% Similarity=0.142 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhh
Q psy11630 36 LTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGI 115 (169)
Q Consensus 36 ~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggi 115 (169)
++..++.+|++|+=..-=+.-.. +...|+++.| -.+..-++...+=.+ |+.++++
T Consensus 10 ~~~~l~~~f~~g~G~~~lq~~~n-~~v~~~~~~~-------~~~~~l~~~~~~~~~-----------------G~~~gP~ 64 (310)
T TIGR01272 10 YVLFLGALFVLASGLTILQVAAN-PYVSILGPIE-------TAASRLALTQAFNKL-----------------GTTVAPL 64 (310)
T ss_pred HHHHHHHHHHHHhhHHHHHhhHH-HHHHHHCCcc-------hHHHHHHHHHHHhhh-----------------HHHHHHH
Confidence 33344444444433333233332 3456676643 345556666666666 8889999
Q ss_pred HHHHhh
Q psy11630 116 AAGLIS 121 (169)
Q Consensus 116 liG~Is 121 (169)
+.+.+.
T Consensus 65 i~~~~i 70 (310)
T TIGR01272 65 FGGSLI 70 (310)
T ss_pred HHHHHH
Confidence 999877
No 203
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=69.04 E-value=13 Score=33.46 Aligned_cols=19 Identities=32% Similarity=0.658 Sum_probs=15.6
Q ss_pred chhhhhhHHHHhhhccCCc
Q psy11630 109 GGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~ 127 (169)
|+++|.++.|++-|++|-+
T Consensus 350 g~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 350 GGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred HHHHHHHHHHHHHHHhcch
Confidence 6668999999999987744
No 204
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=67.95 E-value=8.8 Score=34.66 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=34.3
Q ss_pred HHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC
Q psy11630 59 TAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG 125 (169)
Q Consensus 59 ~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G 125 (169)
.+...++.++ +-.||+.|+...+.++ |..+++.+.|++.+++|
T Consensus 373 ~~~~~~~~p~-------~~egt~~al~~s~~~l-----------------g~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 373 LVLLARLCPS-------GCESSVFALLASILHL-----------------GSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHhCCC-------CceehHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHcC
Confidence 3455666653 4678888888888888 99999999999999888
No 205
>KOG0252|consensus
Probab=67.68 E-value=6.9 Score=37.80 Aligned_cols=63 Identities=16% Similarity=0.173 Sum_probs=34.5
Q ss_pred CcCCCCCCCCcchHHHHHHHHHH-HHHHHhh-cCC-c-HHHHHHHHHHHhhhhcchHHHHHHHHhhhcccc
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTE-LFIYQLL-GAT-S-LTMSIVLLLLLGSLVNGPYALITTAVSAELGTH 68 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~-l~~y~~~-~~~-~-~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~ 68 (169)
||+|||--. ..-.+...+.+ +.....- ++. + +...++.=+++|+=|+|=|-+.+ +++.|-.++
T Consensus 109 D~~GRK~vY---G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSA-tI~SE~an~ 175 (538)
T KOG0252|consen 109 DKFGRKKVY---GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSA-TIMSESANK 175 (538)
T ss_pred hhhcchhhh---hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchH-HHhhhhhhh
Confidence 788988655 33222222222 2222221 111 2 22333444699999999988885 677777653
No 206
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=64.69 E-value=19 Score=33.62 Aligned_cols=96 Identities=17% Similarity=0.173 Sum_probs=53.7
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhh
Q psy11630 3 RLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVT 82 (169)
Q Consensus 3 ~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvt 82 (169)
||.||=-.+|+-...+++.+....+=... +.+....--.++|+-|.--+-|+=+.+=-|.. |-.+..+
T Consensus 69 ~Lar~~g~er~l~~~Llli~~G~~iR~~~---~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp---------k~~~~mt 136 (395)
T COG2807 69 RLARRFGEERSLFLALLLIAAGILIRSLG---GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP---------KRVGLMT 136 (395)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc---------cchhhHH
Confidence 45566556666666666666665553321 22222222335555555445555444444553 3445555
Q ss_pred hhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhcc-CCc
Q psy11630 83 SIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMT-GKS 127 (169)
Q Consensus 83 giIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~-GW~ 127 (169)
|+---.= -+|++++..+...++++. ||+
T Consensus 137 glYs~sl-----------------~~~aaLaa~lavpla~~~~gW~ 165 (395)
T COG2807 137 GLYSTSL-----------------GAGAALAAALAVPLAQHSGGWR 165 (395)
T ss_pred hHHHHHH-----------------HHHHHHHhhhhhHHHHhhccHH
Confidence 5543332 338888888888888777 799
No 207
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=63.90 E-value=7.8 Score=36.85 Aligned_cols=36 Identities=19% Similarity=0.246 Sum_probs=31.5
Q ss_pred cccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 92 ASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 92 ~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.++++++.+.+...||+|.++++++++++.|+.|-+
T Consensus 63 F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~ 98 (633)
T TIGR00805 63 FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP 98 (633)
T ss_pred hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc
Confidence 356788899999999999999999999999988754
No 208
>PF12832 MFS_1_like: MFS_1 like family
Probab=63.04 E-value=12 Score=26.42 Aligned_cols=24 Identities=17% Similarity=0.157 Sum_probs=18.8
Q ss_pred chhhhhhHHHHhhhccCCcHHHHH
Q psy11630 109 GGIFGGIAAGLISDMTGKSASVCA 132 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~a~~c~ 132 (169)
-..+++.+.|.++|+++.+-.+..
T Consensus 47 ~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 47 IRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHHHHHHHHHHHHHHHCccHHHHH
Confidence 566799999999999998844433
No 209
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=61.27 E-value=48 Score=31.32 Aligned_cols=85 Identities=19% Similarity=0.215 Sum_probs=45.1
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCC-cHHHHHHHHHHHhhhhcchHHHHHH--HHhhhccccccccCCcchhhhhhhhhcc
Q psy11630 11 SRSKVQRVNHYTTELFIYQLLGAT-SLTMSIVLLLLLGSLVNGPYALITT--AVSAELGTHECLEGNSKALATVTSIIDG 87 (169)
Q Consensus 11 ~~~~v~~l~~~~~~l~~y~~~~~~-~~~~~~~ll~l~Gffi~GP~~Li~~--a~a~dlg~~~~l~~n~kA~atvtgiIdg 87 (169)
|++.+..+.+++...+++|-.... ++.+-++.+|++|.=+. .|-++ .-..++|+++ ..+-=-.+..+
T Consensus 78 k~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~---~LetaaNp~v~~lg~~~-------~a~~rlnl~q~ 147 (422)
T COG0738 78 KAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIG---LLETAANPYVTLLGKPE-------SAAFRLNLAQA 147 (422)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhH---HHHhccchHHHHhCCch-------hHHHHHHHHHH
Confidence 445678888888888888732111 23333333333332221 11111 1123445532 23333345555
Q ss_pred cccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 88 TGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 88 ~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
+-.+ |+++++++++.+.+
T Consensus 148 fn~l-----------------Ga~~gp~~g~~lil 165 (422)
T COG0738 148 FNGL-----------------GAILGPLLGSSLIL 165 (422)
T ss_pred hhhh-----------------HHHHHHHHHHHHHH
Confidence 6666 99999999998887
No 210
>PRK09848 glucuronide transporter; Provisional
Probab=60.34 E-value=61 Score=28.29 Aligned_cols=8 Identities=50% Similarity=0.804 Sum_probs=3.6
Q ss_pred hcchHHHH
Q psy11630 50 VNGPYALI 57 (169)
Q Consensus 50 i~GP~~Li 57 (169)
+.-|+.-.
T Consensus 126 ~~~~~~al 133 (448)
T PRK09848 126 VNIPYGSL 133 (448)
T ss_pred hcccHhhh
Confidence 33455444
No 211
>KOG0255|consensus
Probab=59.49 E-value=59 Score=29.07 Aligned_cols=92 Identities=21% Similarity=0.238 Sum_probs=47.8
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcH-HHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhh
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSL-TMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALAT 80 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~-~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~at 80 (169)
+|.|||.+. ....+... ..++.....+.... ++...+..+..+++..-++++ ...+.|+-+- -.-.+
T Consensus 375 ~~~gR~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~el~pt-------~~r~~ 442 (521)
T KOG0255|consen 375 PEFGRRPPL---FLSLFLAG-IGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLI-FLYSAELIPT-------VVRNT 442 (521)
T ss_pred HHhCcHHHH---HHHHHHHH-HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHH-HHHHHhhccH-------HHHHH
Confidence 466777776 44333333 33333333233222 122222223333444444444 6778888552 24567
Q ss_pred hhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 81 VTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 81 vtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
+.|.+...+.+ |+++++.+.-....
T Consensus 443 ~~~~~~~~~~~-----------------~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 443 AVGAISAAARL-----------------GSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHhh
Confidence 77777777777 87777766644433
No 212
>KOG1330|consensus
Probab=57.97 E-value=8.9 Score=36.72 Aligned_cols=65 Identities=12% Similarity=0.063 Sum_probs=46.0
Q ss_pred HHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC-Cc------H-HH
Q psy11630 59 TAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG-KS------A-SV 130 (169)
Q Consensus 59 ~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G-W~------a-~~ 130 (169)
...-+|.-++ ..-+++-|+-+...++ |.++|.+....+++.++ || + ..
T Consensus 143 ~s~IaD~f~~-------~~Rs~~~~ify~~ipv-----------------GsglG~vvgs~va~~~~~Wr~af~~~avl~ 198 (493)
T KOG1330|consen 143 PSLIADSFPD-------DKRSRVLGIFYFAIPV-----------------GSGLGYVVGSVVASLTFWWRWAFRGSAVLG 198 (493)
T ss_pred hhHhhhcCcc-------hhhhHHHHHhhhhccc-----------------ccceeEEeeeeeccCccceEEEEEeehHHH
Confidence 4466788664 3567889999999999 99999999999999888 77 2 23
Q ss_pred HHHHHHhHHhhhhhccc
Q psy11630 131 CATMLVLSIPMKQKGNQ 147 (169)
Q Consensus 131 c~~mlll~~~~~e~~~~ 147 (169)
..+.+|+-...+|-+++
T Consensus 199 vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 199 VIVGLLVFLFVREPERG 215 (493)
T ss_pred HHHHHHHHhhccCcccc
Confidence 33444444555555544
No 213
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=55.62 E-value=88 Score=29.25 Aligned_cols=62 Identities=23% Similarity=0.192 Sum_probs=33.7
Q ss_pred HHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHH
Q psy11630 39 SIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAG 118 (169)
Q Consensus 39 ~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG 118 (169)
..+.++++|.-+.--+--. -+...|+.+. +--+.+.+++=.+=-+ |-+++.++.|
T Consensus 92 a~l~F~l~G~G~~~s~T~~-lALl~D~~~e-------~~R~~~v~ivw~Mli~-----------------G~iv~ai~~g 146 (403)
T PF03209_consen 92 AALAFLLYGLGVHASGTSF-LALLADLAPE-------ERRPRVVAIVWVMLIV-----------------GIIVSAIVFG 146 (403)
T ss_pred HHHHHHHHHhhHhHhHHHH-HHHHHhcCCH-------hhhhhhHHHHHHHHHH-----------------HHHHHHHHHH
Confidence 3444445555444332222 2456777663 2334444444444334 7778888899
Q ss_pred HhhhccC
Q psy11630 119 LISDMTG 125 (169)
Q Consensus 119 ~Isd~~G 125 (169)
.+.|.|.
T Consensus 147 ~lL~~~s 153 (403)
T PF03209_consen 147 RLLDPFS 153 (403)
T ss_pred HHccccC
Confidence 8877553
No 214
>PRK09109 motC flagellar motor protein; Reviewed
Probab=53.33 E-value=14 Score=31.75 Aligned_cols=61 Identities=25% Similarity=0.399 Sum_probs=40.9
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhhh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYKE 155 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~~ 155 (169)
+|||.|+|+-++.+. |-..+-+++-..+++..|| .+++.++..|+.-|-.++.++|..+++
T Consensus 159 lGTVlGlI~~f~~l~--------------~p~~lg~gIa~ALvtT~~G---l~vA~~~~~Pia~kl~~~~~~e~~~~~ 219 (246)
T PRK09109 159 IGAVMGLIHVMENLA--------------DPSQLGSGIAVAFVATIYG---VASANLLFLPVANKLKSIIHRQSRYRE 219 (246)
T ss_pred HHHHHHHHHHHHhcC--------------CHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999888881 3233335666677777777 555566666777776666666666654
No 215
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.21 E-value=18 Score=28.57 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=14.0
Q ss_pred chhhhhhHHHHhhhcc
Q psy11630 109 GGIFGGIAAGLISDMT 124 (169)
Q Consensus 109 GaaiggiliG~Isd~~ 124 (169)
+|++-|..+||+.|+|
T Consensus 54 sGilVGa~iG~llD~~ 69 (116)
T COG5336 54 SGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7778889999999987
No 216
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=53.21 E-value=18 Score=24.62 Aligned_cols=23 Identities=22% Similarity=0.472 Sum_probs=19.1
Q ss_pred hhccchhhhhhHHHHhhhccCCc
Q psy11630 105 VFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 105 ~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.+-+++.+++++.|++.|++|.+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~ 28 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK 28 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh
Confidence 34458889999999999999877
No 217
>KOG2532|consensus
Probab=53.18 E-value=14 Score=34.26 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=30.7
Q ss_pred chhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhh-h--ccCCcH
Q psy11630 76 KALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLIS-D--MTGKSA 128 (169)
Q Consensus 76 kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Is-d--~~GW~a 128 (169)
+=++++.|+++.++.+ .+.++++++|.+. | ...|+.
T Consensus 389 q~a~~l~g~~~~~~~~-----------------~~~~~P~~vg~~~~~~t~~eW~~ 427 (466)
T KOG2532|consen 389 QHAGFVMGIINFVGAL-----------------AGFIAPLLVGIIVTDNTREEWRI 427 (466)
T ss_pred hHHHHHHHHHHHHHHH-----------------HHHHHHHheeeEeCCCCHHHHHH
Confidence 4689999999999999 9999999999998 3 246873
No 218
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=52.97 E-value=30 Score=33.59 Aligned_cols=55 Identities=16% Similarity=0.218 Sum_probs=37.1
Q ss_pred HhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccc
Q psy11630 29 QLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSI 91 (169)
Q Consensus 29 ~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi 91 (169)
....+.+....+.+.++.|+.+++...+.. +.++=..++ +-+||++|++..+-++
T Consensus 398 a~~~~~n~~~~i~~~~l~g~giG~~~~~~~-~~~ql~~p~-------~~ig~a~gL~~s~R~~ 452 (599)
T PF06609_consen 398 AAVRPDNKNAAIAFLVLAGFGIGGILVPAI-VIAQLIVPD-------EDIGTATGLTGSIRSI 452 (599)
T ss_pred HHccCCCcchHHHHHHHHHHhHHHHHHHHH-HeeEeeeCc-------hHHHHHHHHHHHHHHH
Confidence 333444445556777889999999887775 233333443 5899999988877776
No 219
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=51.96 E-value=8.2 Score=33.14 Aligned_cols=35 Identities=40% Similarity=0.492 Sum_probs=30.0
Q ss_pred cccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 92 ASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 92 ~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
.+++.+|-+.+|+..|+|..+ |++.|++.|++|=+
T Consensus 32 l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~ 66 (250)
T PF06813_consen 32 LGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW 66 (250)
T ss_pred hCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH
Confidence 466778888999999999988 69999999999844
No 220
>PRK15432 autoinducer 2 ABC transporter permease LsrC; Provisional
Probab=51.56 E-value=16 Score=32.71 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=28.9
Q ss_pred hhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhcc---C----CcHHHHHHHHHhHHhhhh
Q psy11630 82 TSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMT---G----KSASVCATMLVLSIPMKQ 143 (169)
Q Consensus 82 tgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~---G----W~a~~c~~mlll~~~~~e 143 (169)
+.+++|.|++ .|+++|.++.+.+.+.. + |.-.+..+++++.+.+.+
T Consensus 253 ~~i~GG~gs~----------------~G~viGalll~~l~~~l~~~~~~~~~~~ii~g~lll~vl~~~~ 305 (344)
T PRK15432 253 ISLLGGSGTI----------------IGAVLGAYFLTQIDSVLVLLRIPAWWNDFIAGLVLLGVLVFDG 305 (344)
T ss_pred ccccCCcCch----------------HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhhHHH
Confidence 3567778998 28888999999886632 3 334444455555544444
No 221
>KOG2563|consensus
Probab=51.47 E-value=24 Score=33.81 Aligned_cols=82 Identities=17% Similarity=0.148 Sum_probs=51.4
Q ss_pred HHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHH
Q psy11630 40 IVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGL 119 (169)
Q Consensus 40 ~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~ 119 (169)
.....+.|||-.|=+- ++--.+.|..- +.+=+|-+|+++..|.+ .+++--++.+.
T Consensus 363 ~~t~~~~g~~~~~~~P-ig~ElgvE~Ty-------Pv~E~tSsGll~~~gq~-----------------f~~~~~~~~~~ 417 (480)
T KOG2563|consen 363 FTTCGLLGFFGTGYLP-IGFELGVETTY-------PVAEGTSSGLLNLSGQI-----------------FGVILVFIMGI 417 (480)
T ss_pred hhhHHHHHHhhcCCCC-cceeeeeeecc-------ccCCcccceeEEeehhH-----------------HHHHHHHHHHH
Confidence 3334467777666443 43334444422 34668899999999999 77777788888
Q ss_pred hhhccC----Cc------HHHHHHHHHhHHhhhhhcc
Q psy11630 120 ISDMTG----KS------ASVCATMLVLSIPMKQKGN 146 (169)
Q Consensus 120 Isd~~G----W~------a~~c~~mlll~~~~~e~~~ 146 (169)
..+.++ |. ...+....++-+++|+.++
T Consensus 418 ~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 418 LAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred HhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 887776 33 2333445556666776543
No 222
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=51.31 E-value=64 Score=27.76 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=17.1
Q ss_pred chhhhhhHHHHhhhccCCc
Q psy11630 109 GGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~~GW~ 127 (169)
|+.++..+.+++.|++||.
T Consensus 84 G~~~~~~~~~~i~~~~~~~ 102 (372)
T PF00854_consen 84 GSLFSPTLVPYIQQNYGWF 102 (372)
T ss_dssp HHHHHHHCCCHHHHCS-HH
T ss_pred hhHhhcccchhhccccchh
Confidence 9999999999999999999
No 223
>PRK11618 inner membrane ABC transporter permease protein YjfF; Provisional
Probab=50.98 E-value=89 Score=27.05 Aligned_cols=57 Identities=23% Similarity=0.331 Sum_probs=36.2
Q ss_pred chhhhhhhhhc------ccccccccCccccCCcchhhccchhhhhhHHHHhhhcc--------CCcHHHHHHHHHhHHhh
Q psy11630 76 KALATVTSIID------GTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMT--------GKSASVCATMLVLSIPM 141 (169)
Q Consensus 76 kA~atvtgiId------g~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~--------GW~a~~c~~mlll~~~~ 141 (169)
.-.+.++-+++ |.|++. |+.+|.++.+.+.+.. .|+..+-.+++++.+..
T Consensus 244 ~l~~~~avvlGg~~~~GG~gs~~----------------G~~iGal~l~~l~~~~~~~~~~~~~~~~~~~G~ili~~~~~ 307 (317)
T PRK11618 244 ELDAIAAVVIGGTLLTGGVGTVL----------------GTLFGVLIQGLIQTYITFDGTLSSWWTKIVIGILLFVFIAL 307 (317)
T ss_pred HHHHHHHhhhcCccccCCCCchH----------------HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 34455556665 999982 8888999999887632 25555566666666555
Q ss_pred hhhcccc
Q psy11630 142 KQKGNQE 148 (169)
Q Consensus 142 ~e~~~~~ 148 (169)
.+..++.
T Consensus 308 ~~~~~~~ 314 (317)
T PRK11618 308 QRGLTVL 314 (317)
T ss_pred HHHHHHh
Confidence 5444433
No 224
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=50.92 E-value=69 Score=31.19 Aligned_cols=59 Identities=15% Similarity=0.062 Sum_probs=33.3
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHHHHHHhhhcccc
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALITTAVSAELGTH 68 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~ 68 (169)
|..|||.-. ++..++.+...++-. .+++....+.=..++|+- .|.+.+. ..+..|+.+.
T Consensus 103 DlfGRr~~~----i~g~~l~vvG~Iv~a--tA~~~~~~iag~~l~Gvg-aG~~~~~-~~~isEl~p~ 161 (599)
T PF06609_consen 103 DLFGRRYFF----IIGSLLGVVGSIVCA--TAQNMNTFIAGMVLYGVG-AGVQELA-ALAISELVPN 161 (599)
T ss_pred HHhcchHHH----HHHHHHHHhHHHHhh--cCCcHHHHHHHHHHHHHh-hHHHHHH-HHHHHHhccc
Confidence 667877655 333334444443333 345666666666677775 4555555 4557788653
No 225
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=50.87 E-value=80 Score=29.52 Aligned_cols=64 Identities=16% Similarity=0.240 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhh----hhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhh
Q psy11630 37 TMSIVLLLLLGS----LVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIF 112 (169)
Q Consensus 37 ~~~~~ll~l~Gf----fi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaai 112 (169)
+...+++..+|+ +.+-||.|++.... + ..+-.|+--|+.|.+-.+ ..++
T Consensus 381 ~~~l~~~~~~Gi~~A~~~siPfal~s~~~~----~------~~~~~G~~mgilN~~I~l-----------------pQii 433 (477)
T TIGR01301 381 ASALIVFAILGIPLAITYSIPFALASIRSS----N------LGAGQGLSMGVLNLAIVI-----------------PQII 433 (477)
T ss_pred HHHHHHHHHhhHHHHHHHHHhHHHHHHHcc----c------cCCCCcchhhHHHHHHHH-----------------HHHH
Confidence 445555556665 67889999975433 1 124568888999988888 8888
Q ss_pred hhhHHHHhhhccCCc
Q psy11630 113 GGIAAGLISDMTGKS 127 (169)
Q Consensus 113 ggiliG~Isd~~GW~ 127 (169)
..+..|.+.+.+|-+
T Consensus 434 ~sl~~g~~~~~~g~~ 448 (477)
T TIGR01301 434 VSLGSGPWDQLFGGG 448 (477)
T ss_pred HHHHHHHHHHHcCCC
Confidence 888888877777755
No 226
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=49.18 E-value=1.1e+02 Score=22.65 Aligned_cols=69 Identities=23% Similarity=0.292 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcc-cccccccCccccCCcchhhccchhhhh
Q psy11630 36 LTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDG-TGSIASLSNTLSGDLATVFDIGGIFGG 114 (169)
Q Consensus 36 ~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg-~Gsi~~~~~~~a~~LS~~~DvGaaigg 114 (169)
.+...+..+..|+....-.... .+...|.-+. . +..+.+.++... ...+ |.++++
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~-----------------~~~~~~ 149 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVA-SALLSEWFPE---A---TERGLAVGLVTLGAGAL-----------------GLALGP 149 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHH-HHHHHHhcCc---h---hHHHHHHHHHHHHHHHH-----------------HHHHHH
Confidence 4444444444565555333333 3455555442 0 344555555554 3444 666666
Q ss_pred hHHHHhhhc--cCCcH
Q psy11630 115 IAAGLISDM--TGKSA 128 (169)
Q Consensus 115 iliG~Isd~--~GW~a 128 (169)
++.+.+.+. .+|+.
T Consensus 150 ~~~~~~~~~~~~~~~~ 165 (338)
T COG0477 150 LLAGLLLGALLWGWRA 165 (338)
T ss_pred HHHHHHHHHHhcchHH
Confidence 666666654 57885
No 227
>PF01618 MotA_ExbB: MotA/TolQ/ExbB proton channel family MotA family only; InterPro: IPR002898 This family groups together integral membrane proteins that appear to be involved in translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flagellar motor that uses a proton gradient to generate rotational motion in the flagellar []. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.; GO: 0008565 protein transporter activity, 0006810 transport, 0016020 membrane
Probab=48.66 E-value=19 Score=27.57 Aligned_cols=40 Identities=35% Similarity=0.430 Sum_probs=23.5
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccC
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTG 125 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~G 125 (169)
-+|||.|+|..+..+.. ... -|...+.+++-..+++..+|
T Consensus 70 LlGTv~Gmi~~f~~l~~---~~~------~~~~~l~~gi~~Al~tT~~G 109 (139)
T PF01618_consen 70 LLGTVIGMIEAFQALAE---TGS------GDPSQLAGGISVALITTAYG 109 (139)
T ss_pred HHHHHHHHHHHHHHHhc---ccC------CCHHHHHHHHHHHHHHHHHH
Confidence 57899999999888821 111 22233445565666655544
No 228
>KOG0637|consensus
Probab=48.56 E-value=54 Score=31.65 Aligned_cols=84 Identities=17% Similarity=0.258 Sum_probs=41.6
Q ss_pred CcCCCCCCCCcchHHHHHHHHHHHHHHHhh-------cCC-cH--HHHHHHHHHHhhhhcchH-HHHHHHH---hhhccc
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTELFIYQLL-------GAT-SL--TMSIVLLLLLGSLVNGPY-ALITTAV---SAELGT 67 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~l~~y~~~-------~~~-~~--~~~~~ll~l~Gffi~GP~-~Li~~a~---a~dlg~ 67 (169)
-|.|||-|- ...-.+..+.+++.+-+. ++. .. -.-.+.++++||-+-=-. +.+.+.. -.|+..
T Consensus 96 sr~GRRRPf---I~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~ 172 (498)
T KOG0637|consen 96 SRYGRRRPF---ILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLAR 172 (498)
T ss_pred cccccccch---HHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhcc
Confidence 378999888 666666666666655322 221 11 112334456665322111 1222222 234443
Q ss_pred cccccCCcchhhhhhhhhcccccc
Q psy11630 68 HECLEGNSKALATVTSIIDGTGSI 91 (169)
Q Consensus 68 ~~~l~~n~kA~atvtgiIdg~Gsi 91 (169)
++ ..+++ +.+..++-++.|.+
T Consensus 173 ~d--~~~~~-Ans~f~~f~avGnv 193 (498)
T KOG0637|consen 173 GD--AKKTR-ANSVFSFFMAVGNV 193 (498)
T ss_pred Ch--hhhhc-cchhHHHHHHhcce
Confidence 32 11222 67777888877776
No 229
>PRK08456 flagellar motor protein MotA; Validated
Probab=48.35 E-value=18 Score=31.14 Aligned_cols=62 Identities=16% Similarity=0.160 Sum_probs=39.4
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhhh
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYKE 155 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~~ 155 (169)
-+|||.|+|.-++++. |...+-+++-..+++..|| .+++-++..|+.-|-.+...++..+++
T Consensus 158 llGTVlGlI~~~~~l~--------------dp~~lg~gIa~ALvtT~yG---l~vAn~~~~Pia~kl~~~~~~e~~~~~ 219 (257)
T PRK08456 158 LVGAVMGLMLALQKLD--------------NPAEMAAGIAGAFTATVTG---IMGSYALFGPWGHKLKAKSKDIIKEKT 219 (257)
T ss_pred HHHHHHHHHHHHHhcC--------------CHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999998881 3333335555666766665 455566666666666666566655554
No 230
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=47.18 E-value=1.2e+02 Score=28.27 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=24.4
Q ss_pred cCCcchhhhhhhhh---cccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 72 EGNSKALATVTSII---DGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 72 ~~n~kA~atvtgiI---dg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
++|+.+++...... |.+- -+++++++|.+.+..+..
T Consensus 141 ~~~~~~La~~NA~mRRIDL~c--------------------kllaPl~vG~l~t~~s~~ 179 (432)
T PF06963_consen 141 GGDPGALARMNATMRRIDLFC--------------------KLLAPLFVGLLMTFASPV 179 (432)
T ss_pred CCChhhHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHhhccCHH
Confidence 45677777776653 4333 347999999998865554
No 231
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=46.11 E-value=1.1e+02 Score=27.55 Aligned_cols=51 Identities=20% Similarity=0.129 Sum_probs=25.5
Q ss_pred hhhhHHHHhhhccCCcH-HHHHHHHHhHHhhhhhcccchhhhhhhhhcCCCC
Q psy11630 112 FGGIAAGLISDMTGKSA-SVCATMLVLSIPMKQKGNQEAEQDYKEHEANPEN 162 (169)
Q Consensus 112 iggiliG~Isd~~GW~a-~~c~~mlll~~~~~e~~~~~~~~~~~~~~~~~~~ 162 (169)
++-++++.+.-.+||.. -.+..+++....+..-....++.-.-..|..|++
T Consensus 170 v~vIia~i~i~~~~w~~~Dpi~si~i~~lil~~a~~l~k~s~~iLle~~P~~ 221 (296)
T COG1230 170 VGVIIAAIVIRFTGWSWLDPILSIVIALLILSSAWPLLKESLNILLEGVPEG 221 (296)
T ss_pred HHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 34455566666678883 2333333333334444444444444555666654
No 232
>PRK08124 flagellar motor protein MotA; Validated
Probab=43.70 E-value=23 Score=30.67 Aligned_cols=61 Identities=23% Similarity=0.324 Sum_probs=34.4
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhhh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYKE 155 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~~ 155 (169)
+|||.|+|.-++++. |...+-+++-..+++..|| .+.+..+..|+--|-..+.++|..+++
T Consensus 160 lGTVlGlI~~f~~l~--------------~p~~lg~gIa~ALitT~yG---l~vA~~~~~Pia~kl~~~~~~e~~~~~ 220 (263)
T PRK08124 160 LGAVIGLIAALGNLS--------------DIEKLGHAISAAFVATLLG---IFTGYVLWHPFANKLKRKSKEEIELKY 220 (263)
T ss_pred HHHHHHHHHHHHhcc--------------CHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888888871 3233335556666666654 333444444554444444445544443
No 233
>KOG3762|consensus
Probab=43.66 E-value=68 Score=31.75 Aligned_cols=33 Identities=21% Similarity=0.461 Sum_probs=19.4
Q ss_pred hhhhHHHHhhhccCCc------HHHHHHHHHhHHhhhhh
Q psy11630 112 FGGIAAGLISDMTGKS------ASVCATMLVLSIPMKQK 144 (169)
Q Consensus 112 iggiliG~Isd~~GW~------a~~c~~mlll~~~~~e~ 144 (169)
+|.++.|.+.+++|-+ .+.|.+.|.+-+.++-.
T Consensus 511 ~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 511 LGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred hhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 6667777777777655 34455555555554443
No 234
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=40.89 E-value=1.4e+02 Score=27.35 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=29.9
Q ss_pred HHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHh
Q psy11630 45 LLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLI 120 (169)
Q Consensus 45 l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~I 120 (169)
-+|.....|-.+. .+.+..+ ++-.+.++|+-..+-.+ |+++|+.+..+.
T Consensus 390 g~Ge~~~~~~g~~---~~~~~aP-------~~~~g~~~g~~~l~~~i-----------------g~~lg~~l~~~~ 438 (489)
T PRK10207 390 SLGELFISALGLA---MIAALVP-------QHLMGFILGMWFLTQAA-----------------AFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHhHHHHH---HHHHhCh-------HHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHh
Confidence 4555555554333 2333434 45788888888877777 777777766544
No 235
>PRK03612 spermidine synthase; Provisional
Probab=39.92 E-value=1.9e+02 Score=27.28 Aligned_cols=62 Identities=21% Similarity=0.341 Sum_probs=39.8
Q ss_pred HHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHH
Q psy11630 40 IVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGL 119 (169)
Q Consensus 40 ~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~ 119 (169)
..++++.|||++.-.-++.-. ..+.. .+..+...|-+-+..++ |+++|.++.|+
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~-~~~~~--------~~~~g~~~g~ly~~ntl-----------------Ga~~G~l~~~~ 167 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRI-LQRIR--------DQHLGHNVATVLAADYL-----------------GALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhcc--------ccchhhhhhhhHhHHhH-----------------HHHHHHHHHHH
Confidence 344556778777776666432 22221 12345566777778888 99999999988
Q ss_pred hh-hccCCc
Q psy11630 120 IS-DMTGKS 127 (169)
Q Consensus 120 Is-d~~GW~ 127 (169)
+. ..+|-.
T Consensus 168 vLlp~lG~~ 176 (521)
T PRK03612 168 LLLPRLGLI 176 (521)
T ss_pred HHHHhcchH
Confidence 86 467743
No 236
>TIGR03727 urea_t_UrtC_arc urea ABC transporter, permease protein UrtC, archaeal type. Members of this protein family are ABC transporter permease subunits restricted to the Archaea. Several lines of evidence suggest this protein is functionally analogous, as well as homologous, to the UrtC subunit of the Corynebacterium glutamicum urea transporter. All members of the operon show sequence similarity to urea transport subunits, the gene is located near the urease structural subunits in two of three species, and partial phylogenetic profiling identifies this permease subunit as closely matching the profile of urea utilization.
Probab=39.16 E-value=1.1e+02 Score=27.54 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=23.0
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM 123 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~ 123 (169)
+...+.-+++|.|++. |+++|.++.+++.+.
T Consensus 274 ~~~~~~~vlGG~gs~~----------------G~i~Ga~ll~~l~~~ 304 (364)
T TIGR03727 274 TLPVVWVSLGGRESLL----------------GAIVATVAIEWLRKW 304 (364)
T ss_pred HHHHHHHhcCCCCchH----------------HHHHHHHHHHHHHHH
Confidence 3444445789999983 888899999888764
No 237
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.98 E-value=46 Score=27.15 Aligned_cols=17 Identities=35% Similarity=0.427 Sum_probs=15.3
Q ss_pred hhhhhHHHHhhhccCCc
Q psy11630 111 IFGGIAAGLISDMTGKS 127 (169)
Q Consensus 111 aiggiliG~Isd~~GW~ 127 (169)
+.||++.|.+.|++||-
T Consensus 103 i~gQli~glliD~fG~~ 119 (150)
T COG3238 103 IAGQLIMGLLIDHFGWF 119 (150)
T ss_pred HHHHHHHHHHHHhhccc
Confidence 34999999999999996
No 238
>COG0559 LivH Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism]
Probab=38.84 E-value=34 Score=30.42 Aligned_cols=28 Identities=36% Similarity=0.722 Sum_probs=23.1
Q ss_pred hhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 79 ATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 79 atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
+-++.+++|.||+. |+++|++++|.+..
T Consensus 231 ~F~~~VlGGlgSi~----------------GA~~gglliG~~e~ 258 (297)
T COG0559 231 AFAAVVLGGLGSIP----------------GAVLGGLLLGLAES 258 (297)
T ss_pred HHHHhhccCcccHH----------------HHHHHHHHHHHHHH
Confidence 55788999999994 88899999996633
No 239
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=37.63 E-value=51 Score=29.11 Aligned_cols=72 Identities=15% Similarity=0.150 Sum_probs=44.4
Q ss_pred cchHHHHHHHHHHHHHHHhhcCCc--HHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccc
Q psy11630 12 RSKVQRVNHYTTELFIYQLLGATS--LTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTG 89 (169)
Q Consensus 12 ~~~v~~l~~~~~~l~~y~~~~~~~--~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~G 89 (169)
+..++.++.+......|...+... -.+..++-..+|.++....+..-. ++..+..+......+|++-++|
T Consensus 137 ~kgi~~Ll~stigy~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~i~~~~~--------~~~~~~k~~~~nil~G~~w~ig 208 (269)
T PF06800_consen 137 KKGILALLISTIGYWIYSVIPKAFHVSGWSAFLPQAIGMLIGAFIFNLFS--------KKPFFEKKSWKNILTGLIWGIG 208 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCChhHhHHHHHHHHHHHHHHHhhcc--------cccccccchHHhhHHHHHHHHH
Confidence 445666677766666676553331 124455556788777654333321 3344445677888999999999
Q ss_pred cc
Q psy11630 90 SI 91 (169)
Q Consensus 90 si 91 (169)
++
T Consensus 209 nl 210 (269)
T PF06800_consen 209 NL 210 (269)
T ss_pred HH
Confidence 88
No 240
>TIGR00901 2A0125 AmpG-related permease.
Probab=37.51 E-value=57 Score=27.07 Aligned_cols=43 Identities=19% Similarity=0.087 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhc
Q psy11630 36 LTMSIVLLLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIID 86 (169)
Q Consensus 36 ~~~~~~ll~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiId 86 (169)
.+...+..++.++......... .+...|..+ ++-.|++-|+..
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~p-------~~~~g~~~g~~~ 351 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAF-VAFLSKLSN-------PKFGATQMALLS 351 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH-HHHHHHhcC-------CCccHHHHHHHH
Confidence 3444444444455544333333 456666665 346666666544
No 241
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=37.48 E-value=1.2e+02 Score=27.70 Aligned_cols=23 Identities=9% Similarity=0.124 Sum_probs=11.6
Q ss_pred CcCCCCCCCCcchHHHHHHHHHH
Q psy11630 2 TRLGLKPPTSRSKVQRVNHYTTE 24 (169)
Q Consensus 2 ~~~g~~~~~~~~~v~~l~~~~~~ 24 (169)
+|+++|.+..+.-.+.+++...+
T Consensus 341 ~~l~~r~~~~~~~~~G~~l~~l~ 363 (500)
T PRK09584 341 NKMGDRLPMPHKFAIGMVLCSGA 363 (500)
T ss_pred HHhCcCCCcHHHHHHHHHHHHHH
Confidence 47787765533333434444444
No 242
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=37.32 E-value=1.2e+02 Score=29.46 Aligned_cols=17 Identities=12% Similarity=0.276 Sum_probs=13.3
Q ss_pred cchhhhhhHHHHhhhcc
Q psy11630 108 IGGIFGGIAAGLISDMT 124 (169)
Q Consensus 108 vGaaiggiliG~Isd~~ 124 (169)
+|+.++.++++++.+.+
T Consensus 135 iGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 135 AGSLISTIITPILRGDV 151 (654)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 38888889999998543
No 243
>PF03605 DcuA_DcuB: Anaerobic c4-dicarboxylate membrane transporter; InterPro: IPR004668 These proteins are members of the C4-Dicarboxylate Uptake (Dcu) family. Most proteins in this family are predicted to have 12 GES predicted transmembrane regions; however the one member whose membrane topology has been experimentally determined has 10 transmembrane regions, with both the N- and C-termini localized to the periplasm []. The DcuA and DcuB proteins are involved in the transport of aspartate, malate, fumarate and succinate in many species [, , ], and are thought to function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively []. The Escherichia coli DcuA and DcuB proteins have very different expression patterns []. DcuA is constitutively expressed; DcuB is strongly induced anaerobically by FNR and C4-dicarboxylates, while it is repressed by nitrate and subject to CRP-mediated catabolite repression.; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane
Probab=36.50 E-value=1.7e+02 Score=27.14 Aligned_cols=99 Identities=18% Similarity=0.214 Sum_probs=60.3
Q ss_pred HHHHhhhhcchHHHHHHHHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 43 LLLLGSLVNGPYALITTAVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 43 l~l~Gffi~GP~~Li~~a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
+.-.|--.|.-.-.|. =++.|-+=++ ...=+.+++++=+.-++|= |.++. -..++.+..
T Consensus 98 ~~GTgh~a~s~lPVI~-eVA~~~~IRP---eRPls~svvASq~aItaSP----------------iSAA~-~~~~~~l~~ 156 (364)
T PF03605_consen 98 LAGTGHVAYSLLPVIA-EVAKENGIRP---ERPLSISVVASQIAITASP----------------ISAAT-VAMIAILAP 156 (364)
T ss_pred HhcccHHHHHhhHHHH-HHHHHcCCCC---CCchHHHHHHHhcchhcCc----------------HHHHH-HHHHHHHcc
Confidence 3344555555455553 3555555443 3345777888888877774 14444 334566666
Q ss_pred ccCCc----------HHHHHHHHHhHHhhhhhcccchhhhhhhhhcCCCC
Q psy11630 123 MTGKS----------ASVCATMLVLSIPMKQKGNQEAEQDYKEHEANPEN 162 (169)
Q Consensus 123 ~~GW~----------a~~c~~mlll~~~~~e~~~~~~~~~~~~~~~~~~~ 162 (169)
..||+ ++++.+++..-...+..++...+..|.+...+|+.
T Consensus 157 ~~gv~~~~iL~V~iPat~ig~~~~a~~~~~~GkeL~~Dp~yq~rl~~g~~ 206 (364)
T PF03605_consen 157 AHGVSLLQILAVTIPATLIGVLVAAFVSSRRGKELDDDPEYQERLADGLV 206 (364)
T ss_pred ccCCCHHHHHHhhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHhcccc
Confidence 57887 56666666666666777777777777777666643
No 244
>TIGR03409 urea_trans_UrtB urea ABC transporter, permease protein UrtB. Members of this protein family are ABC transporter permease proteins associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=35.52 E-value=49 Score=28.26 Aligned_cols=31 Identities=16% Similarity=0.389 Sum_probs=24.5
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM 123 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~ 123 (169)
..+.+.-+++|.|++. |+++|.++.+.+.+.
T Consensus 226 ~~~~a~vvlGG~gs~~----------------G~viGal~l~~l~~~ 256 (291)
T TIGR03409 226 VDSFLVVVFGGVGSLW----------------GTVVAAFGLGVANKI 256 (291)
T ss_pred HHHhheEEeCCCCchH----------------HHHHHHHHHHHHHHH
Confidence 3456677888999983 888899999998764
No 245
>PF01940 DUF92: Integral membrane protein DUF92; InterPro: IPR002794 Many members of this family have no known function and are predicted to be integral membrane proteins.; GO: 0016021 integral to membrane
Probab=35.21 E-value=39 Score=28.98 Aligned_cols=40 Identities=18% Similarity=0.234 Sum_probs=22.9
Q ss_pred hccchhhhhhHHHHh-hhccCCcHHHH--HHHHHhHHhhhhhc
Q psy11630 106 FDIGGIFGGIAAGLI-SDMTGKSASVC--ATMLVLSIPMKQKG 145 (169)
Q Consensus 106 ~DvGaaiggiliG~I-sd~~GW~a~~c--~~mlll~~~~~e~~ 145 (169)
.|..|+++.+++|.+ .-..||...++ ..+++-....|.++
T Consensus 18 Lt~sGa~aa~~vG~~~~~~~g~~~~~~L~~FF~~ss~~Tk~~~ 60 (226)
T PF01940_consen 18 LTLSGALAAFLVGTLIYGFGGWPWFLLLLAFFISSSLATKYKK 60 (226)
T ss_pred CCHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCh
Confidence 456888889999984 44456774433 33333344444433
No 246
>PRK06743 flagellar motor protein MotP; Reviewed
Probab=34.12 E-value=43 Score=29.16 Aligned_cols=61 Identities=23% Similarity=0.286 Sum_probs=34.8
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhhh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYKE 155 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~~ 155 (169)
+|||.|+|.-++.+. |...+-.++-..+++..|| .+++-++..|+.-|-+.+..++..+++
T Consensus 156 lGTVlGLI~~~~~l~--------------~p~~lg~gIa~ALvtT~yG---l~~An~~~~Pia~kL~~~~~~e~~~~~ 216 (254)
T PRK06743 156 IGTLIGLIIMLQNLQ--------------DTSQIGTGMAVAMLTTLYG---SVLANMIAIPLAEKVYRGIEDLYTEKK 216 (254)
T ss_pred HHHHHHHHHHhHccC--------------CHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577888887777761 2223334555566666554 555555666666665555555554443
No 247
>PF01788 PsbJ: PsbJ; InterPro: IPR002682 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbJ found in PSII. PsbJ is one of the most hydrophobic proteins in the thylakoid membrane, and is located in a gene cluster with PsbE, PsbF and PsbL (PsbEFJL). Both PsbJ and PsbL (IPR003372 from INTERPRO) are essential for proper assembly of the OEC. Mutations in PsbJ cause the light-harvesting antenna to remain detached from the PSII dimers []. In addition, both PsbJ and PsbL are involved in the unidirectional flow of electrons, where PsbJ regulates the forward electron flow from D2 (Qa) to the plastoquinone pool, and PsbL prevents the reduction of PSII by back electron flow from plastoquinol protecting PSII from photo-inactivation [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_J 3ARC_J 3A0B_J 3KZI_J 2AXT_J 3PRQ_J 4FBY_b 3BZ2_J 1S5L_j 3PRR_J ....
Probab=33.68 E-value=26 Score=23.07 Aligned_cols=18 Identities=28% Similarity=0.549 Sum_probs=13.6
Q ss_pred HHHHHHHhhhhcchHHHH
Q psy11630 40 IVLLLLLGSLVNGPYALI 57 (169)
Q Consensus 40 ~~ll~l~Gffi~GP~~Li 57 (169)
+..+.++|.|+||+|.=+
T Consensus 19 ~~vi~lvglFfYGsYsGl 36 (40)
T PF01788_consen 19 IAVIGLVGLFFYGSYSGL 36 (40)
T ss_dssp HHHHHHHHHHHHCTTTST
T ss_pred HHHHHHHHHheecccCCc
Confidence 345678999999998543
No 248
>TIGR00297 conserved hypothetical protein TIGR00297.
Probab=33.13 E-value=45 Score=28.98 Aligned_cols=46 Identities=15% Similarity=0.078 Sum_probs=28.0
Q ss_pred hccchhhhhhHHHHhhh-ccCCc--HHHHHHHHHhHHhhhhhcccchhh
Q psy11630 106 FDIGGIFGGIAAGLISD-MTGKS--ASVCATMLVLSIPMKQKGNQEAEQ 151 (169)
Q Consensus 106 ~DvGaaiggiliG~Isd-~~GW~--a~~c~~mlll~~~~~e~~~~~~~~ 151 (169)
.|..|+++.+++|.+.- ..||+ ..++..+++-....|.++++.+++
T Consensus 24 L~~sG~~~a~~vG~~~~~~~g~~~~~~ll~Ff~~sS~~Tk~~~~~K~~~ 72 (237)
T TIGR00297 24 LDPWGYGHAWIMGVIIILFAGFRGLLVILAFFFLGSAVTRYGQEEKKAA 72 (237)
T ss_pred CCHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhHHHHhccHHHHHhc
Confidence 35577788888888763 45766 344444455566666655554444
No 249
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=32.92 E-value=29 Score=32.51 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=15.7
Q ss_pred chhhhhhHHHHhhhcc-CCc
Q psy11630 109 GGIFGGIAAGLISDMT-GKS 127 (169)
Q Consensus 109 GaaiggiliG~Isd~~-GW~ 127 (169)
...+++++.|+++|++ |-+
T Consensus 57 ~~~l~~ligG~LaDRilGrr 76 (493)
T PRK15462 57 LVYVTPILGGFLADKVLGNR 76 (493)
T ss_pred HHHHHHHHHHHHHHHccCcH
Confidence 5566888999999998 866
No 250
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=32.73 E-value=19 Score=33.39 Aligned_cols=14 Identities=21% Similarity=0.432 Sum_probs=11.8
Q ss_pred chhhhhhHHHHhhh
Q psy11630 109 GGIFGGIAAGLISD 122 (169)
Q Consensus 109 GaaiggiliG~Isd 122 (169)
|.+++..++|++-+
T Consensus 150 g~ai~s~~~G~L~~ 163 (412)
T PF01306_consen 150 GFAIASLLAGILFN 163 (412)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhheeee
Confidence 88888888888876
No 251
>KOG0254|consensus
Probab=32.26 E-value=44 Score=30.22 Aligned_cols=20 Identities=30% Similarity=0.720 Sum_probs=18.7
Q ss_pred cchhhhhhHHHHhhhccCCc
Q psy11630 108 IGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 108 vGaaiggiliG~Isd~~GW~ 127 (169)
+|+++++++.|.++|.+|.+
T Consensus 100 lga~~g~l~~g~l~d~~GRk 119 (513)
T KOG0254|consen 100 LGALVGSLLAGRLGDRIGRK 119 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhH
Confidence 39999999999999999988
No 252
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=31.24 E-value=39 Score=31.34 Aligned_cols=34 Identities=29% Similarity=0.296 Sum_probs=28.6
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
--++-+|++-+++++ .+.+.|++.|.++|+.|-+
T Consensus 40 Ls~~~iG~i~s~~~~-----------------~~l~~qp~~G~i~Dklg~k 73 (412)
T PF01306_consen 40 LSGTEIGIIFSAGSL-----------------FALLAQPVYGFISDKLGLK 73 (412)
T ss_dssp --HHHHHHHHHHHHH-----------------HHHHTHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHH-----------------HHHHHHHhHHHhcchhhhh
Confidence 345678899999998 8889999999999999976
No 253
>KOG0569|consensus
Probab=31.06 E-value=1.5e+02 Score=28.27 Aligned_cols=48 Identities=29% Similarity=0.310 Sum_probs=23.6
Q ss_pred HHHHHHHhhhhcchH-HHHHHHHh---hhccccccccCCcchhhhhhhhhcccccc
Q psy11630 40 IVLLLLLGSLVNGPY-ALITTAVS---AELGTHECLEGNSKALATVTSIIDGTGSI 91 (169)
Q Consensus 40 ~~ll~l~Gffi~GP~-~Li~~a~a---~dlg~~~~l~~n~kA~atvtgiIdg~Gsi 91 (169)
..-++.+|=++.|=+ -+..+.+. .|..+ ++.+-++++.+.+-...|.+
T Consensus 115 ~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP----~~~RG~~g~~~~~~~~~g~l 166 (485)
T KOG0569|consen 115 SFEMLILGRLIVGLACGLSTGLVPMYLTEISP----KNLRGALGTLLQIGVVIGIL 166 (485)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCh----hhhccHHHHHHHHHHHHHHH
Confidence 334556666666632 22222222 24444 23455667766666555555
No 254
>PRK11285 araH L-arabinose transporter permease protein; Provisional
Probab=30.77 E-value=40 Score=29.82 Aligned_cols=48 Identities=17% Similarity=0.262 Sum_probs=31.5
Q ss_pred hhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc---cC----CcHHHHHHHHHhHHhhhhhcc
Q psy11630 83 SIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM---TG----KSASVCATMLVLSIPMKQKGN 146 (169)
Q Consensus 83 giIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~---~G----W~a~~c~~mlll~~~~~e~~~ 146 (169)
.+.+|.|++. |.++|.++.+.+.+. +| |+-.+-..++++++.+...++
T Consensus 273 ~l~GG~Gsv~----------------G~llGalil~~l~~~l~~~gv~~~~~~ii~G~ili~av~~~~~~~ 327 (333)
T PRK11285 273 SLKGGIAKIS----------------GVVAGVLILGTVENAMNLLNISPFYQYVVRGLILLAAVLFDRYKQ 327 (333)
T ss_pred CccCCCCccH----------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556888883 788899999988762 33 334566666666666664433
No 255
>TIGR03622 urea_t_UrtB_arc urea ABC transporter, permease protein UrtB. Members of this protein family are ABC transporter permease subunits restricted to the Archaea. Several lines of evidence suggest this protein is functionally analogous, as well as homologous, to the UrtB subunit of the Corynebacterium glutamicum urea transporter. All members of the operon show sequence similarity to urea transport subunits, the gene is located near the urease structural subunits in two of three species, and partial phylogenetic profiling identifies this permease subunit as closely matching the profile of urea utilization.
Probab=30.47 E-value=43 Score=28.53 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=26.6
Q ss_pred cchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhc
Q psy11630 75 SKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDM 123 (169)
Q Consensus 75 ~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~ 123 (169)
-.-.+.+.-+++|+|++. |+.+|.++++.+.+.
T Consensus 214 ~~l~~~~~vvlGG~~s~~----------------G~~~Gal~l~~~~~~ 246 (283)
T TIGR03622 214 FLVEAFVAVVVGGPSVVL----------------GTALAGGLLGFINAV 246 (283)
T ss_pred HHHHHHHeeeeCCCCchH----------------HHHHHHHHHHHHHHH
Confidence 345567788999999983 888899999998874
No 256
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=29.73 E-value=18 Score=28.41 Aligned_cols=7 Identities=0% Similarity=-0.097 Sum_probs=3.5
Q ss_pred hhccCCc
Q psy11630 121 SDMTGKS 127 (169)
Q Consensus 121 sd~~GW~ 127 (169)
++++||+
T Consensus 26 A~y~gi~ 32 (118)
T PRK10697 26 AHYFDVP 32 (118)
T ss_pred HHHHCCC
Confidence 4455554
No 257
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=29.01 E-value=76 Score=27.71 Aligned_cols=14 Identities=21% Similarity=0.095 Sum_probs=11.7
Q ss_pred hhHHHHhhhccCCc
Q psy11630 114 GIAAGLISDMTGKS 127 (169)
Q Consensus 114 giliG~Isd~~GW~ 127 (169)
..++||.+-++||-
T Consensus 92 n~l~Gw~~grfGlF 105 (254)
T PF07857_consen 92 NCLTGWASGRFGLF 105 (254)
T ss_pred HHHHHHHHhhceec
Confidence 67789999889885
No 258
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]. Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.
Probab=28.79 E-value=17 Score=26.01 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=2.8
Q ss_pred HHHHHHHHhHHhhhhhcccchhhhhhhhhcCCCCccc
Q psy11630 129 SVCATMLVLSIPMKQKGNQEAEQDYKEHEANPENTIE 165 (169)
Q Consensus 129 ~~c~~mlll~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 165 (169)
.+|++++++-+++|- +++-|-+|...|..|.|..-
T Consensus 22 ll~ailLIlf~iyR~--rkkdEGSY~l~e~K~s~~~Y 56 (64)
T PF01034_consen 22 LLFAILLILFLIYRM--RKKDEGSYDLDEPKPSNYAY 56 (64)
T ss_dssp -----------------S------SS--S--------
T ss_pred HHHHHHHHHHHHHHH--HhcCCCCccCCCCCcccccc
Confidence 446666665555544 55566677777776655443
No 259
>KOG4686|consensus
Probab=28.50 E-value=96 Score=29.24 Aligned_cols=52 Identities=25% Similarity=0.303 Sum_probs=38.6
Q ss_pred cchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCC-c-----HHHHHHHHHhHHhhhh
Q psy11630 75 SKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGK-S-----ASVCATMLVLSIPMKQ 143 (169)
Q Consensus 75 ~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW-~-----a~~c~~mlll~~~~~e 143 (169)
++-+||+-|++...-++ |=++-++++|+|.|.-|- . -..|..|-++...+-.
T Consensus 383 E~qLGTaygf~qsIqNL-----------------gla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 383 EEQLGTAYGFIQSIQNL-----------------GLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred HHHhcchHHHHHHHHhh-----------------hhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999 989999999999997762 2 2344444444444433
No 260
>PRK08990 flagellar motor protein PomA; Reviewed
Probab=28.30 E-value=56 Score=28.29 Aligned_cols=61 Identities=20% Similarity=0.249 Sum_probs=34.6
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhhh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYKE 155 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~~ 155 (169)
+|||.|+|.-++.+. |-..+-.++-..+++..|| .+++-++..|+.-|-.++.++|..+++
T Consensus 156 lGTVlGlI~~~~~l~--------------~p~~lg~gIa~ALitT~yG---l~~An~v~~P~a~kl~~~~~~e~~~~~ 216 (254)
T PRK08990 156 IGTLIGLVAMLSNMD--------------DPKSIGPAMAVALLTTLYG---AVLANMVAIPIADKLSLRMGEEMLNRN 216 (254)
T ss_pred HHHHHHHHHHHHhcc--------------CHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777777771 1111113444455555443 556666777776666666666665554
No 261
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=27.60 E-value=37 Score=26.48 Aligned_cols=17 Identities=29% Similarity=0.376 Sum_probs=15.2
Q ss_pred hhhhhHHHHhhhccCCc
Q psy11630 111 IFGGIAAGLISDMTGKS 127 (169)
Q Consensus 111 aiggiliG~Isd~~GW~ 127 (169)
..||++.+.+.|++||-
T Consensus 98 ~~GQl~~sl~iD~fG~f 114 (138)
T PF04657_consen 98 VAGQLIASLLIDHFGLF 114 (138)
T ss_pred HHHHHHHHHHHHHcccc
Confidence 45999999999999995
No 262
>PTZ00370 STEVOR; Provisional
Probab=27.02 E-value=49 Score=29.94 Aligned_cols=41 Identities=17% Similarity=0.099 Sum_probs=21.0
Q ss_pred hhhHHHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhh
Q psy11630 113 GGIAAGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYK 154 (169)
Q Consensus 113 ggiliG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~ 154 (169)
.+...|.+-. +|-.|.++.++.++-+.+--|-++||+.+++
T Consensus 247 AtaAsaaF~P-ygiaalvllil~vvliilYiwlyrrRK~swk 287 (296)
T PTZ00370 247 ASAASSAFYP-YGIAALVLLILAVVLIILYIWLYRRRKNSWK 287 (296)
T ss_pred HHHHHHhhcc-cHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 3444444433 3333444444444444455577777777775
No 263
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=26.71 E-value=55 Score=27.56 Aligned_cols=7 Identities=57% Similarity=1.483 Sum_probs=3.4
Q ss_pred chhhhhh
Q psy11630 109 GGIFGGI 115 (169)
Q Consensus 109 Gaaiggi 115 (169)
|+++|++
T Consensus 18 g~~iGg~ 24 (248)
T PF11368_consen 18 GGLIGGF 24 (248)
T ss_pred HHHHHHH
Confidence 4555444
No 264
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=26.35 E-value=1.4e+02 Score=26.88 Aligned_cols=59 Identities=15% Similarity=0.387 Sum_probs=39.8
Q ss_pred HHhhhccccccccCCcchhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc----------HH
Q psy11630 60 AVSAELGTHECLEGNSKALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS----------AS 129 (169)
Q Consensus 60 a~a~dlg~~~~l~~n~kA~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~----------a~ 129 (169)
..++++.++ ..=||+-|+..++.++ |..+++.+...+.+.+|.. -.
T Consensus 341 vl~a~lcP~-------G~Egt~yall~s~~Nl-----------------g~~~s~~lg~~l~~~~~vt~~~f~~l~~lil 396 (433)
T PF03092_consen 341 VLAARLCPK-------GSEGTVYALLASFSNL-----------------GSSVSSTLGAFLMELFGVTRDDFSNLWLLIL 396 (433)
T ss_pred HHHHHHCCC-------CchHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHcCCCcccccchHHHHH
Confidence 345566553 2457888888888888 8888888888888877642 34
Q ss_pred HHHHHHHhHHhhh
Q psy11630 130 VCATMLVLSIPMK 142 (169)
Q Consensus 130 ~c~~mlll~~~~~ 142 (169)
+|.++-++++++-
T Consensus 397 i~~~~~ll~l~ll 409 (433)
T PF03092_consen 397 ICSVIQLLPLPLL 409 (433)
T ss_pred HHHHHHHHHHHHH
Confidence 5555556666654
No 265
>COG1172 AraH Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]
Probab=26.19 E-value=50 Score=29.47 Aligned_cols=39 Identities=10% Similarity=0.331 Sum_probs=28.8
Q ss_pred chhhhhhHHHHhhhc---c----CCcHHHHHHHHHhHHhhhhhccc
Q psy11630 109 GGIFGGIAAGLISDM---T----GKSASVCATMLVLSIPMKQKGNQ 147 (169)
Q Consensus 109 GaaiggiliG~Isd~---~----GW~a~~c~~mlll~~~~~e~~~~ 147 (169)
|..+|.++++.+.+- . .|+-.+-..++++++...+++++
T Consensus 266 Gt~~Galil~~l~ngl~l~~v~~~~q~~i~G~iil~av~~~~~~~~ 311 (316)
T COG1172 266 GTLLGALILGVLQNGLNLLGVSSYWQQIIKGLIILLAVALDGRRRK 311 (316)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888888888772 2 35567777788888888877665
No 266
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=26.14 E-value=3.3e+02 Score=21.48 Aligned_cols=43 Identities=19% Similarity=0.133 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHHHH
Q psy11630 14 KVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYALI 57 (169)
Q Consensus 14 ~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~Li 57 (169)
....++.....-..+..+-..+ +..++.-+++|++++.-....
T Consensus 103 ~~~~~l~~~l~~~~fa~lfgg~-~~~~~~a~i~g~~~~~~~~~~ 145 (193)
T PF06738_consen 103 PWLVILAAGLASAAFALLFGGS-WIDMIVAFILGLLVGLLRQLL 145 (193)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 3333434333333333332334 445555667787777655554
No 267
>KOG3764|consensus
Probab=25.32 E-value=1.2e+02 Score=29.10 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=28.6
Q ss_pred hhhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhhccCCc
Q psy11630 77 ALATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 77 A~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
..|+|.+|-|-.=++ |.++|+.+.|.+.+..|..
T Consensus 400 vYGsVyaIad~a~sl-----------------a~a~GP~~gg~iv~~iGF~ 433 (464)
T KOG3764|consen 400 VYGSVYAIADAAFSL-----------------AYAIGPTFGGSLVEAIGFE 433 (464)
T ss_pred eeeeHHHHHHHHHHH-----------------hhhccccccchheeehhHH
Confidence 677888887766666 9999999999999998865
No 268
>PRK06926 flagellar motor protein MotP; Reviewed
Probab=25.03 E-value=73 Score=28.04 Aligned_cols=60 Identities=20% Similarity=0.316 Sum_probs=38.5
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhh-hhhHHHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhhh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIF-GGIAAGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYKE 155 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaai-ggiliG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~~ 155 (169)
+||+-|+|.-++++. | -+.+ .++.+.+++..|| ++++-++.+|+.-|-.++.++|..+++
T Consensus 164 iGTviGLI~mL~~L~--------------d-p~~IG~~mAvAlvtTlYG---v~~Anlif~PiA~kL~~~~~~e~~~~~ 224 (271)
T PRK06926 164 IGTLVGLVLMLKNLN--------------D-PSTLGPNMAIALLTTLYG---TLLANLVFLPIAAKLEEKTEEEVFVKQ 224 (271)
T ss_pred HHHHHHHHHHHHhcC--------------C-HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888887771 1 1223 3444466666665 667777777877777777666666654
No 269
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=24.69 E-value=4.5e+02 Score=22.55 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=18.6
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhhhHHHHhhh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGGIAAGLISD 122 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaiggiliG~Isd 122 (169)
-|+|.|+.-++--+ | ++++.++-.++..+
T Consensus 129 RG~vvgilk~~~GL-----------S-----aai~t~i~~~~f~~ 157 (250)
T PF06813_consen 129 RGTVVGILKGFFGL-----------S-----AAIFTQIYSAFFGD 157 (250)
T ss_pred cCceehhhhHHHHh-----------H-----HHHHHHHHHHHcCC
Confidence 47777777665555 1 44457777777766
No 270
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=24.07 E-value=2.3e+02 Score=26.20 Aligned_cols=14 Identities=21% Similarity=0.090 Sum_probs=7.7
Q ss_pred HHhhhhcchHHHHH
Q psy11630 45 LLGSLVNGPYALIT 58 (169)
Q Consensus 45 l~Gffi~GP~~Li~ 58 (169)
+..+...-+|.+.-
T Consensus 366 ~~~~~~~i~Y~l~~ 379 (507)
T TIGR00910 366 LTVVIYLCAYFLFF 379 (507)
T ss_pred HHHHHHHHHHHHHH
Confidence 44555566665553
No 271
>PRK09110 flagellar motor protein MotA; Validated
Probab=23.89 E-value=79 Score=27.92 Aligned_cols=61 Identities=21% Similarity=0.319 Sum_probs=32.2
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhhh-hHHHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhhh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFGG-IAAGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYKE 155 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaigg-iliG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~~ 155 (169)
+|||-|+|.-++++. + |. ..+|+ +.+.++...|| +..+-.+..|+--|-+.+.++|..+++
T Consensus 178 iGtv~GLI~~l~~l~-------~------dp-~~iG~~iAvAlv~TlyG---i~lAn~i~~PiA~kl~~~~~~e~~~~~ 239 (283)
T PRK09110 178 VAAVLGVVKTMGSID-------Q------PP-AVLGALIGAALVGTFLG---ILLAYGFVGPLAARLEQVVEEDTKMYQ 239 (283)
T ss_pred HHHHHHHHHHHHhcC-------C------CH-HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666666666660 0 11 22322 33444555443 455566666666666666666655544
No 272
>PRK12482 flagellar motor protein MotA; Provisional
Probab=22.69 E-value=86 Score=27.88 Aligned_cols=61 Identities=25% Similarity=0.273 Sum_probs=39.1
Q ss_pred hhhhhhhhcccccccccCccccCCcchhhccchhhh-hhHHHHhhhccCCcHHHHHHHHHhHHhhhhhcccchhhhhhh
Q psy11630 78 LATVTSIIDGTGSIASLSNTLSGDLATVFDIGGIFG-GIAAGLISDMTGKSASVCATMLVLSIPMKQKGNQEAEQDYKE 155 (169)
Q Consensus 78 ~atvtgiIdg~Gsi~~~~~~~a~~LS~~~DvGaaig-giliG~Isd~~GW~a~~c~~mlll~~~~~e~~~~~~~~~~~~ 155 (169)
+|||-|+|.-++++. |+- ..+| ++.+.+++..|| ++++-++..|+.-|-+++.++|..+++
T Consensus 178 iGtvlGLI~mL~~L~-------d~p-------~~IG~~iAvALvtTfYG---v~lAn~i~~PiA~kL~~~~~~e~~~~~ 239 (287)
T PRK12482 178 CAAVLGIIITMQSID-------GSI-------AEIGLKVAAALVGTFLG---VFICYCLMDPLANAMEQEIKKELSLLE 239 (287)
T ss_pred HHHHHHHHHHHHhcC-------CCH-------HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778887777771 111 2233 333455555554 677788888888888877777777665
No 273
>PRK12489 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=22.61 E-value=6e+02 Score=24.00 Aligned_cols=15 Identities=40% Similarity=0.226 Sum_probs=9.0
Q ss_pred hhhhhhhhhcccccc
Q psy11630 77 ALATVTSIIDGTGSI 91 (169)
Q Consensus 77 A~atvtgiIdg~Gsi 91 (169)
+.++.++.++++++.
T Consensus 132 a~as~As~lGi~aSp 146 (443)
T PRK12489 132 AAASVASQMGITASP 146 (443)
T ss_pred HHHHHHHHHHHHhcc
Confidence 444555666677776
No 274
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=21.91 E-value=89 Score=24.45 Aligned_cols=17 Identities=35% Similarity=0.716 Sum_probs=9.6
Q ss_pred hhhhhhHHHHhhhccCCc
Q psy11630 110 GIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 110 aaiggiliG~Isd~~GW~ 127 (169)
+.++|++.| |++++||+
T Consensus 11 ~~i~GVcaG-lA~y~gi~ 27 (121)
T TIGR02978 11 GKIAGVCAG-LADYFGVE 27 (121)
T ss_pred CEehhHHHH-HHHHHCcC
Confidence 334555444 45677776
No 275
>PLN02776 prenyltransferase
Probab=21.83 E-value=6.1e+02 Score=23.09 Aligned_cols=46 Identities=20% Similarity=0.177 Sum_probs=24.2
Q ss_pred chhhh--hhHHHHhhh--ccCCcHHHHHHHHHhHHh--hhhhcccchhhhhhh
Q psy11630 109 GGIFG--GIAAGLISD--MTGKSASVCATMLVLSIP--MKQKGNQEAEQDYKE 155 (169)
Q Consensus 109 Gaaig--giliG~Isd--~~GW~a~~c~~mlll~~~--~~e~~~~~~~~~~~~ 155 (169)
|++.| +.++||.+- .+.|.+.+.+..+.+-.+ ...-..+++| ||+.
T Consensus 130 G~~~Ga~ppL~Gw~Avtg~~~~~~~~Lf~~~~~Wq~pHf~~la~~~~d-Dy~~ 181 (341)
T PLN02776 130 GAVVGAIPPLMGWAAASGQLDAGAMVLAAALYFWQMPHFMALAYMCRD-DYAA 181 (341)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhHH-HHHh
Confidence 55554 677787764 345655555555555444 3333344444 4543
No 276
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=21.66 E-value=1.2e+02 Score=23.96 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=19.7
Q ss_pred cccCCcchhhccchhhhhhHHHHhhhccCCcHHHHHHHHHhHHhhhhh
Q psy11630 97 TLSGDLATVFDIGGIFGGIAAGLISDMTGKSASVCATMLVLSIPMKQK 144 (169)
Q Consensus 97 ~~a~~LS~~~DvGaaiggiliG~Isd~~GW~a~~c~~mlll~~~~~e~ 144 (169)
+...++| ++++.+|+.|.+. .++.+++++..+++..
T Consensus 56 ql~h~fs-----~~~i~~Ii~gv~a-------GvIg~Illi~y~irR~ 91 (122)
T PF01102_consen 56 QLVHRFS-----EPAIIGIIFGVMA-------GVIGIILLISYCIRRL 91 (122)
T ss_dssp SSSSSSS------TCHHHHHHHHHH-------HHHHHHHHHHHHHHHH
T ss_pred ccccCcc-----ccceeehhHHHHH-------HHHHHHHHHHHHHHHH
Confidence 3445666 4556677777664 3344555555555443
No 277
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.44 E-value=1.9e+02 Score=31.27 Aligned_cols=22 Identities=23% Similarity=0.519 Sum_probs=18.2
Q ss_pred hccchhhhhhHHHHhhhccCCc
Q psy11630 106 FDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 106 ~DvGaaiggiliG~Isd~~GW~ 127 (169)
+.-||++|.++..++...+|+-
T Consensus 140 ~~gGGIIG~lLs~lL~~LfG~v 161 (1355)
T PRK10263 140 FASGGVIGSLLSTTLQPLLHSS 161 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhHH
Confidence 3569999999999998888865
No 278
>PF04799 Fzo_mitofusin: fzo-like conserved region; InterPro: IPR006884 This entry represents the heptad repeat domain which is conserved at the C terminus of Fzo/mitofusion family of GTPases. Fzo is a mediator of mitochondrial fusion during spermatogenesis []. This conserved region is also found in the human mitofusin protein []. This domain forms a dimeric antiparallel coiled coil structure, which has been proposed to act as a mitochodrial tether before vesicle fusion [].; GO: 0003924 GTPase activity, 0006184 GTP catabolic process, 0008053 mitochondrial fusion, 0005741 mitochondrial outer membrane, 0016021 integral to membrane; PDB: 1T3J_A.
Probab=21.27 E-value=32 Score=28.77 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=0.0
Q ss_pred hhHHHHhhhccCCcHHHHHHHHHhHHhhhh---hcccchhhh----hhhhhcCCCC
Q psy11630 114 GIAAGLISDMTGKSASVCATMLVLSIPMKQ---KGNQEAEQD----YKEHEANPEN 162 (169)
Q Consensus 114 giliG~Isd~~GW~a~~c~~mlll~~~~~e---~~~~~~~~~----~~~~~~~~~~ 162 (169)
-++.|.+....|||-+++++.+.-.+-.-| |-+.-+||. |-+|-+.--+
T Consensus 34 liv~gvv~rtvGWrvIa~~~~~Yg~lYlYERLtWT~~AKER~fK~Qfv~hAt~KLr 89 (171)
T PF04799_consen 34 LIVGGVVWRTVGWRVIAVSGSLYGGLYLYERLTWTNKAKERAFKRQFVDHATEKLR 89 (171)
T ss_dssp --------------------------------------------------------
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 345577778889996666655555554444 333444444 4455544333
No 279
>COG3619 Predicted membrane protein [Function unknown]
Probab=20.26 E-value=98 Score=26.67 Aligned_cols=16 Identities=19% Similarity=0.291 Sum_probs=8.5
Q ss_pred ccchhhhhhHHHHhhh
Q psy11630 107 DIGGIFGGIAAGLISD 122 (169)
Q Consensus 107 DvGaaiggiliG~Isd 122 (169)
=+|+++|+.+.-++.+
T Consensus 182 ~~GAi~g~ll~~~~g~ 197 (226)
T COG3619 182 IVGAICGALLTLFFGL 197 (226)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3466665555555444
No 280
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=20.13 E-value=1.6e+02 Score=20.97 Aligned_cols=39 Identities=21% Similarity=0.080 Sum_probs=20.1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcchHH
Q psy11630 8 PPTSRSKVQRVNHYTTELFIYQLLGATSLTMSIVLLLLLGSLVNGPYA 55 (169)
Q Consensus 8 ~~~~~~~v~~l~~~~~~l~~y~~~~~~~~~~~~~ll~l~Gffi~GP~~ 55 (169)
+.-+||-.+..++.+..++... ++.+.-.+||++|-=|.
T Consensus 14 ~~~~r~e~itFl~la~~l~Pil---------sV~~VG~yGFiVWM~Qi 52 (62)
T COG4459 14 PSEKRSEWITFLFLAFGLFPIL---------SVAFVGGYGFIVWMFQI 52 (62)
T ss_pred cchhhhHHHHHHHHHHHHHHHH---------HHHHhcchhHHHHHHHH
Confidence 3345655555445444444332 33444567777775444
No 281
>COG3333 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.06 E-value=1.4e+02 Score=29.00 Aligned_cols=24 Identities=25% Similarity=0.256 Sum_probs=16.7
Q ss_pred hhhccchhhhhhHHHHhhhccCCc
Q psy11630 104 TVFDIGGIFGGIAAGLISDMTGKS 127 (169)
Q Consensus 104 ~~~DvGaaiggiliG~Isd~~GW~ 127 (169)
..|||...++==++||+-+.+++.
T Consensus 410 ~~fDv~~~~~fG~lgY~~~kl~~p 433 (504)
T COG3333 410 SVFDVYLMLGFGLLGYLLRKLGFP 433 (504)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCC
Confidence 468888777655667777766665
Done!