Query psy11631
Match_columns 219
No_of_seqs 146 out of 427
Neff 4.8
Searched_HMMs 13730
Date Fri Aug 16 23:37:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11631.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11631hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 g1lq8.1 e.1.1.1 (A:,B:) Protei 42.1 14 0.001 30.0 4.8 71 107-180 20-105 (358)
2 d1uhga_ e.1.1.1 (A:) Ovalbumin 37.3 18 0.0013 29.6 4.8 64 107-171 26-109 (385)
3 d1lj5a_ e.1.1.1 (A:) Plasminog 37.1 11 0.00083 30.7 3.5 63 107-170 31-100 (379)
4 d1b0na1 a.34.1.1 (A:74-108) Si 36.4 17 0.0012 21.2 3.1 19 115-133 9-27 (35)
5 d1o6ba_ c.26.1.3 (A:) Phosphop 33.4 13 0.00098 25.8 2.9 35 123-157 126-162 (163)
6 d2af7a1 a.152.1.2 (A:1-119) Ga 32.9 7.6 0.00056 27.7 1.4 54 87-144 53-107 (119)
7 d1imva_ e.1.1.1 (A:) Pigment e 32.6 8.3 0.00061 32.0 1.8 62 107-171 42-111 (383)
8 d1qlpa_ e.1.1.1 (A:) Antitryps 31.2 22 0.0016 28.8 4.3 98 81-182 1-114 (372)
9 d1tqna_ a.104.1.1 (A:) Mammali 31.0 46 0.0033 26.3 6.2 42 143-185 29-71 (472)
10 d2ciba1 a.104.1.1 (A:5-449) Cy 31.0 39 0.0028 26.9 5.8 42 144-186 22-64 (445)
11 d2ij2a1 a.104.1.1 (A:3-455) Cy 29.2 48 0.0035 26.4 6.1 42 143-185 22-64 (453)
12 d2ga1a1 a.4.1.16 (A:1-102) Hyp 29.0 16 0.0012 25.9 2.6 24 108-131 49-72 (102)
13 d3czha1 a.104.1.1 (A:40-502) V 28.7 47 0.0034 25.7 5.8 39 144-183 23-62 (463)
14 d1sxjb1 a.80.1.1 (B:231-322) R 27.6 30 0.0022 22.9 3.8 32 120-151 28-61 (92)
15 d1t6sa1 a.4.5.60 (A:1-85) Segr 26.8 22 0.0016 23.6 2.9 57 120-180 20-83 (85)
16 d1xqga_ e.1.1.1 (A:) Maspin {H 26.4 24 0.0017 28.8 3.7 63 106-171 29-99 (378)
17 d1sb6a_ d.58.17.1 (A:) Copper 25.5 17 0.0012 22.6 2.0 17 198-214 48-64 (64)
18 d2dita1 d.58.7.1 (A:8-106) HIV 25.2 65 0.0047 21.2 5.3 38 143-180 31-73 (99)
19 d1r9oa_ a.104.1.1 (A:) Mammali 25.0 61 0.0044 25.3 5.9 41 142-183 23-64 (467)
20 g1hle.1 e.1.1.1 (A:,B:) Elasta 24.5 28 0.0021 28.2 3.8 60 107-170 27-95 (375)
21 d1x3zb1 a.189.1.1 (B:253-309) 23.1 10 0.00074 24.2 0.5 38 120-159 2-39 (57)
22 d1x8da1 d.58.4.21 (A:1-104) L- 22.8 9.3 0.00068 26.8 0.3 64 121-188 8-75 (104)
23 d1iqpa1 a.80.1.1 (A:233-327) R 21.1 59 0.0043 21.4 4.4 39 114-152 25-65 (95)
24 d2q0ta1 a.152.1.1 (A:1-257) Hy 20.9 28 0.0021 27.5 3.0 71 82-156 53-126 (257)
25 d1igwa_ c.1.12.7 (A:) Isocitra 20.5 68 0.005 27.7 5.6 51 75-130 284-334 (416)
26 d1k9oi_ e.1.1.1 (I:) Alaserpin 20.3 8.4 0.00061 31.7 -0.5 27 107-133 32-64 (376)
No 1
>g1lq8.1 e.1.1.1 (A:,B:) Protein C inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.06 E-value=14 Score=29.99 Aligned_cols=71 Identities=11% Similarity=0.085 Sum_probs=45.0
Q ss_pred EEEcChhhHHHHHHc------CCCHHHHHHHHHhhcCCCCChhHHHHHHHHHHhcC------ceEEEEeCCeEEEEcC--
Q psy11631 107 EYKLTAYSLYAAVSV------GLETHDIIEYLKRLSKTSVPDGIVEFINLCTLSYG------KVKLVLKHNRYFIESP-- 172 (219)
Q Consensus 107 eYRiTp~SL~~A~s~------GltaedIi~~L~~~Sk~~vPq~v~~~I~~~~~ryG------klrlvl~~~~~~L~s~-- 172 (219)
-+-++|+|+|.|++. |-|+++|.+.|.--....-...+...+.....+.. .+++ .+++|+...
T Consensus 20 N~v~SP~si~~~L~~l~~gA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~i~~~~~~~ 96 (358)
T g1lq8.1 20 NIFFSPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQLSL---GNALFTDLVVD 96 (358)
T ss_dssp CEEECHHHHHHHHHHHGGGCCHHHHHHHHHHHTCCSSSSCTHHHHHHHHHHHHTCCCCCSSEEEEE---EEEEEEETTCC
T ss_pred CEEEcHHHHHHHHHHHHHhcChHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhCCCCcchhhe---eeehhhccccc
Confidence 488999999999874 77888888888543333334555656665555543 2444 578888632
Q ss_pred -CHHHHHHH
Q psy11631 173 -FAEVLQKL 180 (219)
Q Consensus 173 -d~~lL~~L 180 (219)
.+...+.+
T Consensus 97 ~~~~f~~~~ 105 (358)
T g1lq8.1 97 LQDTFVSAM 105 (358)
T ss_dssp BCHHHHHHH
T ss_pred cchhHHHHH
Confidence 34444443
No 2
>d1uhga_ e.1.1.1 (A:) Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]}
Probab=37.35 E-value=18 Score=29.61 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=42.6
Q ss_pred EEEcChhhHHHHHH------cCCCHHHHHHHHHhh--------------cCCCCChhHHHHHHHHHHhcCceEEEEeCCe
Q psy11631 107 EYKLTAYSLYAAVS------VGLETHDIIEYLKRL--------------SKTSVPDGIVEFINLCTLSYGKVKLVLKHNR 166 (219)
Q Consensus 107 eYRiTp~SL~~A~s------~GltaedIi~~L~~~--------------Sk~~vPq~v~~~I~~~~~ryGklrlvl~~~~ 166 (219)
-.-++|+|+|.|++ .|-|.++|.+.|.-- +...+.+.+..+.......-+...+.+ .++
T Consensus 26 N~v~SP~si~~~Laml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 104 (385)
T d1uhga_ 26 NIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSFSL-ASR 104 (385)
T ss_dssp CEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTCTTCTTCSHHHHTTTTSCTTTTHHHHHHHHHHTSCCSSEEEEE-EEE
T ss_pred cEEECHHHHHHHHHHHHHhCChHHHHHHHHHhCCCCCccccchhhhhcccHHHHHHHHHHHHHHhhCCCCCceEEE-EEE
Confidence 47899999999973 467788998888521 233566777777766665544333332 577
Q ss_pred EEEEc
Q psy11631 167 YFIES 171 (219)
Q Consensus 167 ~~L~s 171 (219)
+|+..
T Consensus 105 l~v~~ 109 (385)
T d1uhga_ 105 LYAEE 109 (385)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 88764
No 3
>d1lj5a_ e.1.1.1 (A:) Plasminogen activator inhibitor-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.14 E-value=11 Score=30.74 Aligned_cols=63 Identities=8% Similarity=0.156 Sum_probs=40.9
Q ss_pred EEEcChhhHHHHHH------cCCCHHHHHHHHHhh-cCCCCChhHHHHHHHHHHhcCceEEEEeCCeEEEE
Q psy11631 107 EYKLTAYSLYAAVS------VGLETHDIIEYLKRL-SKTSVPDGIVEFINLCTLSYGKVKLVLKHNRYFIE 170 (219)
Q Consensus 107 eYRiTp~SL~~A~s------~GltaedIi~~L~~~-Sk~~vPq~v~~~I~~~~~ryGklrlvl~~~~~~L~ 170 (219)
-.-|+|+|||.|++ .|-|.++|.+.|.-- ....+.+.+..........-+...+.+ .+++|+.
T Consensus 31 N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~-an~l~v~ 100 (379)
T d1lj5a_ 31 NVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMGPWNKDEIST-TDAIFVQ 100 (379)
T ss_dssp CEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTSCTTSTTHHHHHHHHHHHHHCGGGSSEEEE-EEEEEEE
T ss_pred cEEECHHHHHHHHHHHHHhCCcHHHHHHHHHhCCCCChHHHHHHHHHHHHHhhCcccccchhh-hhHHHHh
Confidence 36899999998875 577889999888522 223444555666666555554433322 4778876
No 4
>d1b0na1 a.34.1.1 (A:74-108) SinR repressor dimerisation domain {Bacillus subtilis [TaxId: 1423]}
Probab=36.45 E-value=17 Score=21.15 Aligned_cols=19 Identities=21% Similarity=0.461 Sum_probs=17.1
Q ss_pred HHHHHHcCCCHHHHHHHHH
Q psy11631 115 LYAAVSVGLETHDIIEYLK 133 (219)
Q Consensus 115 L~~A~s~GltaedIi~~L~ 133 (219)
+..||++|.+-++..+||+
T Consensus 9 VkeAM~SGvSK~QFrEfle 27 (35)
T d1b0na1 9 VRDAMTSGVSKKQFREFLD 27 (35)
T ss_dssp HHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHccCCHHHHHHHHH
Confidence 5679999999999999986
No 5
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=33.40 E-value=13 Score=25.80 Aligned_cols=35 Identities=14% Similarity=0.019 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHhhc--CCCCChhHHHHHHHHHHhcCc
Q psy11631 123 LETHDIIEYLKRLS--KTSVPDGIVEFINLCTLSYGK 157 (219)
Q Consensus 123 ltaedIi~~L~~~S--k~~vPq~v~~~I~~~~~ryGk 157 (219)
+++.+|-+.|..=. ..=||+.|..+|++..++.|.
T Consensus 126 ISST~IR~~i~~g~~i~~lVP~~V~~yI~e~~~~~~~ 162 (163)
T d1o6ba_ 126 LSSSIVKEVARYDGSVSEFVPPEVELALQQKFRQGGS 162 (163)
T ss_dssp CCHHHHHHHHHTTCCCTTTSCHHHHHHHHHHHHSCSC
T ss_pred cCHHHHHHHHHcCCChHHhCCHHHHHHHHHHHhccCC
Confidence 55666666554421 233999999999999888883
No 6
>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone decarboxylase, CMD {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=32.88 E-value=7.6 Score=27.66 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=38.2
Q ss_pred HHHHHHHHhhcccccCCceeEEEcChhhHHHHHHcCCCHHHHHHHHHhhcC-CCCChhH
Q psy11631 87 HAHDFLIAIAEPVCRPEHIHEYKLTAYSLYAAVSVGLETHDIIEYLKRLSK-TSVPDGI 144 (219)
Q Consensus 87 ~a~dfL~~iAE~vsrPe~iHeYRiTp~SL~~A~s~GltaedIi~~L~~~Sk-~~vPq~v 144 (219)
.-...|+.+|=+.... . ++.| ..=+.+|+..|+|.+||.+.+.-.+. .+.|..+
T Consensus 53 ~k~r~Li~la~l~a~g-~--~~~l-~~H~~~Al~~G~t~eEi~e~~~~~~~y~G~P~a~ 107 (119)
T d2af7a1 53 LKTRELLTLAALTVLR-A--DDQL-KSHVRGALNAGCSKDEIIEVMIQMAVYAGFPAAI 107 (119)
T ss_dssp HHHHHHHHHHHHHHTT-C--HHHH-HHHHHHHHHTTCCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHhCC-c--HHHH-HHHHHHHHHCCCCHHHHHHHHHHHHHHccHHHHH
Confidence 3445667777676664 2 2333 56789999999999999999887776 3677554
No 7
>d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.56 E-value=8.3 Score=32.00 Aligned_cols=62 Identities=19% Similarity=0.165 Sum_probs=38.9
Q ss_pred EEEcChhhHHHHHHc------CCCHHHHHHHHHh--hcCCCCChhHHHHHHHHHHhcCceEEEEeCCeEEEEc
Q psy11631 107 EYKLTAYSLYAAVSV------GLETHDIIEYLKR--LSKTSVPDGIVEFINLCTLSYGKVKLVLKHNRYFIES 171 (219)
Q Consensus 107 eYRiTp~SL~~A~s~------GltaedIi~~L~~--~Sk~~vPq~v~~~I~~~~~ryGklrlvl~~~~~~L~s 171 (219)
-.-++|+|++.|++. |-|.++|.+.|.- .+...+-......+......-..+++ .++.|+..
T Consensus 42 Niv~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~---~n~i~v~~ 111 (383)
T d1imva_ 42 NVLLSPLSVATALSALSLGADERTESIIHRALYYDLISSPDIHGTYKELLDTVTAPQKNLKS---ASRIVFEK 111 (383)
T ss_dssp CEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTGGGCCCSCHHHHHHHHHHHHTSTTSCEEE---EEEEEECT
T ss_pred cEEECHHHHHHHHHHHHHhcChHHHHHHHHHhCCCCCChHHHHHHHHHHHHhhhcCCcchHH---HHHHHhcc
Confidence 578999999999764 6678888888753 23333434445555554444444665 47777753
No 8
>d1qlpa_ e.1.1.1 (A:) Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.21 E-value=22 Score=28.77 Aligned_cols=98 Identities=16% Similarity=0.232 Sum_probs=50.9
Q ss_pred CCCCHHHHHHHHHHhhccc--ccCCceeEEEcChhhHHHHHHc------CCCHHHHHHHHHhhcCCCCCh-hHHHHHHHH
Q psy11631 81 FSPVYRHAHDFLIAIAEPV--CRPEHIHEYKLTAYSLYAAVSV------GLETHDIIEYLKRLSKTSVPD-GIVEFINLC 151 (219)
Q Consensus 81 ~~P~~~~a~dfL~~iAE~v--srPe~iHeYRiTp~SL~~A~s~------GltaedIi~~L~~~Sk~~vPq-~v~~~I~~~ 151 (219)
||-+++...+|=..+-..+ +++ -.-+-|+|+||+.|++. |-|.++|.+.|.- ..++++. .+......+
T Consensus 1 ~~~~~~~~~~Fa~~l~~~l~~~~~--~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~-~~~~~~~~~~~~~~~~~ 77 (372)
T d1qlpa_ 1 FNKITPNLAEFAFSLYRQLAHQSN--STNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNF-NLTEIPEAQIHEGFQEL 77 (372)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHCS--SSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTC-CTTTSCHHHHHHHHHHH
T ss_pred CchhhHhHHHHHHHHHHHHhhhCC--CCcEEECHHHHHHHHHHHHHhccHHHHHHHHHHhCC-CCCCCcHHHHHHHHHHH
Confidence 3455555555543333221 122 12488999999999873 6677777777643 2334454 333333344
Q ss_pred HHhc----CceEEEEeCCeEEEEcC---CHHHHHHHhc
Q psy11631 152 TLSY----GKVKLVLKHNRYFIESP---FAEVLQKLLK 182 (219)
Q Consensus 152 ~~ry----Gklrlvl~~~~~~L~s~---d~~lL~~Ll~ 182 (219)
.... +...+.. .+++|+... .+..++.+..
T Consensus 78 ~~~~~~~~~~~~l~~-~n~i~~~~~~~l~~~f~~~~~~ 114 (372)
T d1qlpa_ 78 LRTLNQPDSQLQLTT-GNGLFLSEGLKLVDKFLEDVKK 114 (372)
T ss_dssp HHHHSCSSCCCCEEE-EEEEEEETTCCBCHHHHHHHHH
T ss_pred HHHhhccCcchhhhh-heeeeeccCCccCHHHHHHHHH
Confidence 3332 2222321 467787643 3455554443
No 9
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.03 E-value=46 Score=26.26 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHhcCce-EEEEeCCeEEEEcCCHHHHHHHhcCcc
Q psy11631 143 GIVEFINLCTLSYGKV-KLVLKHNRYFIESPFAEVLQKLLKDPV 185 (219)
Q Consensus 143 ~v~~~I~~~~~ryGkl-rlvl~~~~~~L~s~d~~lL~~Ll~d~~ 185 (219)
....++.++.++||.+ ++.+ +++-.|...||+.+++++..+.
T Consensus 29 ~~~~~~~~~~~kyG~i~~~~l-~~~~~vvv~~p~~~~~il~~~~ 71 (472)
T d1tqna_ 29 GFCMFDMECHKKYGKVWGFYD-GQQPVLAITDPDMIKTVLVKEC 71 (472)
T ss_dssp CHHHHHHHHHHHHCSEEEEEE-TTEEEEEECCHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHhCCEEEEEE-CCeeEEEECCHHHHHHHHhcCC
Confidence 4567888999999986 3433 7777788889999999986543
No 10
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=30.97 E-value=39 Score=26.85 Aligned_cols=42 Identities=7% Similarity=0.026 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhcCce-EEEEeCCeEEEEcCCHHHHHHHhcCccc
Q psy11631 144 IVEFINLCTLSYGKV-KLVLKHNRYFIESPFAEVLQKLLKDPVI 186 (219)
Q Consensus 144 v~~~I~~~~~ryGkl-rlvl~~~~~~L~s~d~~lL~~Ll~d~~i 186 (219)
-..++.++.++||.+ ++.+ +++.++...|++.+++++.++..
T Consensus 22 ~~~f~~~~~~kyG~if~~~~-~~~~~v~v~~p~~v~~i~~~~~~ 64 (445)
T d2ciba1 22 PIGLMQRVRDELGDVGTFQL-AGKQVVLLSGSHANEFFFRAGDD 64 (445)
T ss_dssp HHHHHHHHHHHHCSEEEEEE-TTEEEEEECSHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHCCEEEEEE-CCceEEEEcCHHHHHHHHhCCcc
Confidence 356899999999997 3433 67777778889999999877653
No 11
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]}
Probab=29.22 E-value=48 Score=26.39 Aligned_cols=42 Identities=10% Similarity=0.033 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHhcCce-EEEEeCCeEEEEcCCHHHHHHHhcCcc
Q psy11631 143 GIVEFINLCTLSYGKV-KLVLKHNRYFIESPFAEVLQKLLKDPV 185 (219)
Q Consensus 143 ~v~~~I~~~~~ryGkl-rlvl~~~~~~L~s~d~~lL~~Ll~d~~ 185 (219)
....++.++.++||-+ ++.+ +++-+|...|++++++++....
T Consensus 22 ~~~~~~~~~~~kyG~if~~~~-~~~~~vvl~~~~~i~~v~~~~~ 64 (453)
T d2ij2a1 22 KPVQALMKIADELGEIFKFEA-PGRVTRYLSSQRLIKEACDESR 64 (453)
T ss_dssp CHHHHHHHHHHHHCSEEEEEE-TTEEEEEECCHHHHHHHTCTTT
T ss_pred CHHHHHHHHHHHhCCEEEEEe-CCceEEEECCHHHHHHHHhcCC
Confidence 3567889999999996 5544 6777777789999999876544
No 12
>d2ga1a1 a.4.1.16 (A:1-102) Hypothetical protein Ava_0674 (Alr1493 orthologue) {Anabaena variabilis [TaxId: 1172]}
Probab=29.01 E-value=16 Score=25.90 Aligned_cols=24 Identities=13% Similarity=0.302 Sum_probs=21.0
Q ss_pred EEcChhhHHHHHHcCCCHHHHHHH
Q psy11631 108 YKLTAYSLYAAVSVGLETHDIIEY 131 (219)
Q Consensus 108 YRiTp~SL~~A~s~GltaedIi~~ 131 (219)
=|||-.+|...+..|++.++|++.
T Consensus 49 TRI~V~~Il~~l~~G~s~eeIl~~ 72 (102)
T d2ga1a1 49 TRIPVWTLVAYRQQGAPDKELLAN 72 (102)
T ss_dssp SCCBHHHHHHHHHTTCCHHHHHHH
T ss_pred ccccHHHHHHHHHcCCCHHHHHHH
Confidence 478888999999999999999875
No 13
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.74 E-value=47 Score=25.74 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhcCce-EEEEeCCeEEEEcCCHHHHHHHhcC
Q psy11631 144 IVEFINLCTLSYGKV-KLVLKHNRYFIESPFAEVLQKLLKD 183 (219)
Q Consensus 144 v~~~I~~~~~ryGkl-rlvl~~~~~~L~s~d~~lL~~Ll~d 183 (219)
...++.++.++||.| ++.+ +++-.+...||+++++++..
T Consensus 23 ~~~~~~~~~~kyG~if~~~~-g~~~~vvv~dp~~i~~il~~ 62 (463)
T d3czha1 23 PHVYMRKQSQVYGEIFSLDL-GGISTVVLNGYDVVKECLVH 62 (463)
T ss_dssp HHHHHHHHHHHHCSEEEEEE-TTEEEEEEESHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCEEEEEE-CCceEEEECCHHHHHHHHHh
Confidence 446788999999986 3433 67777778899999999854
No 14
>d1sxjb1 a.80.1.1 (B:231-322) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.56 E-value=30 Score=22.95 Aligned_cols=32 Identities=19% Similarity=0.166 Sum_probs=24.8
Q ss_pred HcCCCHHHHHHHHHhhcCC--CCChhHHHHHHHH
Q psy11631 120 SVGLETHDIIEYLKRLSKT--SVPDGIVEFINLC 151 (219)
Q Consensus 120 s~GltaedIi~~L~~~Sk~--~vPq~v~~~I~~~ 151 (219)
.-|+++.||+..|.++..+ .+|+.+.-.|-+.
T Consensus 28 ~~Gys~~DIi~~l~~~i~~~~~~~e~~k~~il~~ 61 (92)
T d1sxjb1 28 KKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKE 61 (92)
T ss_dssp TTTCCHHHHHHHHHHHHHTCTTSCHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHcccccHHHHHHHHHH
Confidence 4699999999999998864 6898775554443
No 15
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=26.76 E-value=22 Score=23.56 Aligned_cols=57 Identities=12% Similarity=0.250 Sum_probs=35.6
Q ss_pred HcCCCHHHHHHHHHhhcCCCC-ChhHHHHHHHHHHhc----CceEEEEeCCeEEEEc--CCHHHHHHH
Q psy11631 120 SVGLETHDIIEYLKRLSKTSV-PDGIVEFINLCTLSY----GKVKLVLKHNRYFIES--PFAEVLQKL 180 (219)
Q Consensus 120 s~GltaedIi~~L~~~Sk~~v-Pq~v~~~I~~~~~ry----Gklrlvl~~~~~~L~s--~d~~lL~~L 180 (219)
.-+++..+|.+.|.. ++ |..|...|.+...+| .-+.|+.-+++|.+.+ +-...++.|
T Consensus 20 ~~Pls~~~L~~~l~~----~~~~~~i~~~l~~L~~~y~~~~~g~el~~~~~gy~~~tk~e~~~~v~kl 83 (85)
T d1t6sa1 20 EEPVNLQTLSQITAH----KFTPSELQEAVDELNRDYEATGRTFRIHAIAGGYRFLTEPEFADLVRQL 83 (85)
T ss_dssp SSCBCHHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHTCSEEEEEETTEEEEEECGGGHHHHHHH
T ss_pred CCCCCHHHHHHHHcc----CCCHHHHHHHHHHHHHHHhcCCCcEEEEEECCEEEEEEhHHHHHHHHHH
Confidence 678888888777753 23 335666666666555 4478876678888754 333444444
No 16
>d1xqga_ e.1.1.1 (A:) Maspin {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.41 E-value=24 Score=28.78 Aligned_cols=63 Identities=17% Similarity=0.223 Sum_probs=42.2
Q ss_pred eEEEcChhhHHHHHH------cCCCHHHHHHHHHhhcCCCCChhHHHHHHHHHHh--cCceEEEEeCCeEEEEc
Q psy11631 106 HEYKLTAYSLYAAVS------VGLETHDIIEYLKRLSKTSVPDGIVEFINLCTLS--YGKVKLVLKHNRYFIES 171 (219)
Q Consensus 106 HeYRiTp~SL~~A~s------~GltaedIi~~L~~~Sk~~vPq~v~~~I~~~~~r--yGklrlvl~~~~~~L~s 171 (219)
.-.-++|+|++.|++ .|-|.++|.+.|.--+...++.....+....... ...+++ .++.|+.-
T Consensus 29 ~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~l~~~~ 99 (378)
T d1xqga_ 29 GNVLFSPIALSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVTSDVNKLSSFYSLKL---IKRLYVDK 99 (378)
T ss_dssp SCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTGGGCSSHHHHHHHHHHHHHHHTTTSSEEE---EEEEEEET
T ss_pred CcEEECHHHHHHHHHHHHHhCChHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcccCCceEEE---eechhhcc
Confidence 357899999999875 4778899998886445556666555555544443 344555 47788863
No 17
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=25.50 E-value=17 Score=22.63 Aligned_cols=17 Identities=6% Similarity=-0.138 Sum_probs=15.0
Q ss_pred chhHHHHHHHhcCCCCC
Q psy11631 198 SQTLINQADKKLKAPQF 214 (219)
Q Consensus 198 ~rg~lkq~L~~lGyPv~ 214 (219)
....|.++|.++||++.
T Consensus 48 ~~~~i~~~i~~~GY~ve 64 (64)
T d1sb6a_ 48 GEEQLRTAIASAGHEVE 64 (64)
T ss_dssp CHHHHHHHHHHHCCCCC
T ss_pred CHHHHHHHHHHcCCCCC
Confidence 66889999999999984
No 18
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.17 E-value=65 Score=21.24 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHhcCceEEEEe-----CCeEEEEcCCHHHHHHH
Q psy11631 143 GIVEFINLCTLSYGKVKLVLK-----HNRYFIESPFAEVLQKL 180 (219)
Q Consensus 143 ~v~~~I~~~~~ryGklrlvl~-----~~~~~L~s~d~~lL~~L 180 (219)
.+...|++.+.+||.|.-+.- .+..||+..+++-++..
T Consensus 31 ~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A 73 (99)
T d2dita1 31 EIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYC 73 (99)
T ss_dssp HHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHH
T ss_pred HHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHH
Confidence 356788999999999876421 25789999998888754
No 19
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.00 E-value=61 Score=25.28 Aligned_cols=41 Identities=20% Similarity=0.179 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHHhcCce-EEEEeCCeEEEEcCCHHHHHHHhcC
Q psy11631 142 DGIVEFINLCTLSYGKV-KLVLKHNRYFIESPFAEVLQKLLKD 183 (219)
Q Consensus 142 q~v~~~I~~~~~ryGkl-rlvl~~~~~~L~s~d~~lL~~Ll~d 183 (219)
...-.++.++.++||.+ ++.+ ++.-+|...||+++++++.+
T Consensus 23 ~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dpe~i~~il~~ 64 (467)
T d1r9oa_ 23 KDISKSLTNLSKVYGPVFTLYF-GLKPIVVLHGYEAVKEALID 64 (467)
T ss_dssp HHHHHHHHHHHHHHCSEEEEES-SSCEEEEECSHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHhCCEEEEEE-CCeeEEEECCHHHHHHHHHh
Confidence 34567788999999985 4433 55666778899999998754
No 20
>g1hle.1 e.1.1.1 (A:,B:) Elastase inhibitor {Horse (Equus caballus) [TaxId: 9796]}
Probab=24.48 E-value=28 Score=28.20 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=36.4
Q ss_pred EEEcChhhHHHHHH------cCCCHHHHHHHHHhhcCCCCChhHHHHHHHHHHhcCc---eEEEEeCCeEEEE
Q psy11631 107 EYKLTAYSLYAAVS------VGLETHDIIEYLKRLSKTSVPDGIVEFINLCTLSYGK---VKLVLKHNRYFIE 170 (219)
Q Consensus 107 eYRiTp~SL~~A~s------~GltaedIi~~L~~~Sk~~vPq~v~~~I~~~~~ryGk---lrlvl~~~~~~L~ 170 (219)
=.-++|+|+|.|++ .|-|.++|.+.|.--....+...+.. +.....+-+. +++ .+++|+.
T Consensus 27 N~v~SP~si~~~L~~l~~GA~g~T~~el~~~L~~~~~~~~~~~~~~-l~~~~~~~~~~~~l~~---~n~l~~~ 95 (375)
T g1hle.1 27 NIFISPLSISSALAMIFLGTRGNTAAQVSKALYFDTVEDIHSRFQS-LNADINKPGAPYILKL---ANRLYGE 95 (375)
T ss_dssp CEEECHHHHHHHHHHHHHTCCHHHHHHHHHHHTGGGSTTHHHHHHH-HHHHHTCSSCSSEEEE---EEEEEEE
T ss_pred CEEECHHHHHHHHHHHHHhCChHHHHHHHHHcCCCCHHHHHHHHHH-HHHHHhCCCCCcEEEE---ecccccc
Confidence 47899999999974 57788899888854333333333333 3333333232 444 4778875
No 21
>d1x3zb1 a.189.1.1 (B:253-309) Rad23 STI1 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.14 E-value=10 Score=24.18 Aligned_cols=38 Identities=18% Similarity=0.468 Sum_probs=31.9
Q ss_pred HcCCCHHHHHHHHHhhcCCCCChhHHHHHHHHHHhcCceE
Q psy11631 120 SVGLETHDIIEYLKRLSKTSVPDGIVEFINLCTLSYGKVK 159 (219)
Q Consensus 120 s~GltaedIi~~L~~~Sk~~vPq~v~~~I~~~~~ryGklr 159 (219)
+.|+|.+|+++.=.-.| +=|+.+.-+.+....||-.+|
T Consensus 2 tiglt~edl~~lr~vvs--g~peal~plle~ls~ryp~lr 39 (57)
T d1x3zb1 2 SIGLTVEDLLSLRQVVS--GNPEALAPLLENISARYPQLR 39 (57)
T ss_dssp CCCCCTTHHHHHHHHHH--HCGGGHHHHHHHHHTTCHHHH
T ss_pred CccccHHHHHHHHHHhc--CChHHHHHHHHHHHHhhHHHH
Confidence 46999999998766666 669999999999999997665
No 22
>d1x8da1 d.58.4.21 (A:1-104) L-rhamnose mutarotase YiiL {Escherichia coli [TaxId: 562]}
Probab=22.83 E-value=9.3 Score=26.76 Aligned_cols=64 Identities=14% Similarity=0.138 Sum_probs=45.5
Q ss_pred cCCCHHHHHHHHHhhcCCCCChhHHHHHHHHHHhcCceEEEEeC--CeE--EEEcCCHHHHHHHhcCccccc
Q psy11631 121 VGLETHDIIEYLKRLSKTSVPDGIVEFINLCTLSYGKVKLVLKH--NRY--FIESPFAEVLQKLLKDPVIQD 188 (219)
Q Consensus 121 ~GltaedIi~~L~~~Sk~~vPq~v~~~I~~~~~ryGklrlvl~~--~~~--~L~s~d~~lL~~Ll~d~~i~~ 188 (219)
.++.++-|-++.+.|+ .|++.|...|+++.- -.-.+.+.+ +.+ |+++++..-.+.+..+|+.+.
T Consensus 8 ~~lkp~~i~eY~~~H~--~vWPEv~~~l~~~Gi--~nysIf~~~~~~~Lf~y~e~~~~~~~~~~a~~~~~~~ 75 (104)
T d1x8da1 8 MQVNPDAHEEYQRRHN--PIWPELEAVLKSHGA--HNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQR 75 (104)
T ss_dssp EECCTTCHHHHHHTTT--TCCHHHHHHHHHTTE--EEEEEEEETTTTEEEEEEEESCHHHHHHGGGSHHHHH
T ss_pred EEECccHHHHHHHHHh--ccCHHHHHHHHHCCC--eEEEEEEECCCCEEEEEEEECcHHhHHHhhCChHHHH
Confidence 3456677889999998 699999999887652 222233333 345 579999988898888887764
No 23
>d1iqpa1 a.80.1.1 (A:233-327) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=21.10 E-value=59 Score=21.35 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=28.5
Q ss_pred hHHHHH-HcCCCHHHHHHHHHhhcC-CCCChhHHHHHHHHH
Q psy11631 114 SLYAAV-SVGLETHDIIEYLKRLSK-TSVPDGIVEFINLCT 152 (219)
Q Consensus 114 SL~~A~-s~GltaedIi~~L~~~Sk-~~vPq~v~~~I~~~~ 152 (219)
.|..-+ .-|+++.||+..|.++-. ..+|+.+...|-+..
T Consensus 25 ~l~~l~~~~G~s~~dIl~~l~~~v~~~~~~~~~k~~ll~~l 65 (95)
T d1iqpa1 25 KLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKI 65 (95)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHGGGSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 355554 469999999999987654 689998766655433
No 24
>d2q0ta1 a.152.1.1 (A:1-257) Hypothetical protein Bxeno_B2006 {Burkholderia xenovorans [TaxId: 36873]}
Probab=20.92 E-value=28 Score=27.50 Aligned_cols=71 Identities=21% Similarity=0.262 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHhhcccccCCceeEEEc-ChhhHHHHHHcCCCHHHHHHHHHhhcCCCCChhH--HHHHHHHHHhcC
Q psy11631 82 SPVYRHAHDFLIAIAEPVCRPEHIHEYKL-TAYSLYAAVSVGLETHDIIEYLKRLSKTSVPDGI--VEFINLCTLSYG 156 (219)
Q Consensus 82 ~P~~~~a~dfL~~iAE~vsrPe~iHeYRi-Tp~SL~~A~s~GltaedIi~~L~~~Sk~~vPq~v--~~~I~~~~~ryG 156 (219)
+.+.+.. ..|+.+|=...... .|-- -.+=+.+|+..|.|.+||.+.|.-.+-.++|..+ ...+.+.....|
T Consensus 53 g~L~~k~-keLi~la~~~a~~~---~~~~~~~~h~~~al~~G~t~~ei~E~l~~~~~~G~~~~~~~~~~~~ev~~e~g 126 (257)
T d2q0ta1 53 NHLDDKT-RAFIALAADACATQ---LYAPGVARHIERALSFGATREELIEVLELVSTIGIHTSNVGVPVLLEVLEEEG 126 (257)
T ss_dssp CSSCHHH-HHHHHHHHHHSTTT---CCHHHHHHHHHHHHHTTCCHHHHHHHHHHHGGGGGHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHH-HHHHHHHHHHHccC---CchHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHcC
Confidence 3454443 44555555544331 1110 1244789999999999999999766666888775 333444444444
No 25
>d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId: 562]}
Probab=20.47 E-value=68 Score=27.66 Aligned_cols=51 Identities=20% Similarity=0.295 Sum_probs=31.5
Q ss_pred eEEEeCCCCCHHHHHHHHHHhhcccccCCceeEEEcChhhHHHHHHcCCCHHHHHH
Q psy11631 75 HIFLESFSPVYRHAHDFLIAIAEPVCRPEHIHEYKLTAYSLYAAVSVGLETHDIIE 130 (219)
Q Consensus 75 tIlLE~~~P~~~~a~dfL~~iAE~vsrPe~iHeYRiTp~SL~~A~s~GltaedIi~ 130 (219)
.|++|+..|..++++.|-..+-.+. |..+-+|-.||.==|.+ +++..++..
T Consensus 284 li~~Et~~~~~e~a~~fa~~v~~~~--p~~~l~yn~SPsfnw~~---~~~~~~~~~ 334 (416)
T d1igwa_ 284 LVWCETSTPDLELARRFAQAIHAKY--PGKLLAYNCSPSFNWQK---NLDDKTIAS 334 (416)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHS--TTCEEEEECC-------------------
T ss_pred EEeeecCCCCHHHHHHHHHhcCCCc--hhHhhccCCCCCcCccc---ccchhHHHH
Confidence 4999999999999998888887776 89999999999888865 255444433
No 26
>d1k9oi_ e.1.1.1 (I:) Alaserpin (serpin 1) {Tobacco hornworm (Manduca sexta) [TaxId: 7130]}
Probab=20.31 E-value=8.4 Score=31.72 Aligned_cols=27 Identities=26% Similarity=0.461 Sum_probs=22.4
Q ss_pred EEEcChhhHHHHH------HcCCCHHHHHHHHH
Q psy11631 107 EYKLTAYSLYAAV------SVGLETHDIIEYLK 133 (219)
Q Consensus 107 eYRiTp~SL~~A~------s~GltaedIi~~L~ 133 (219)
-+-++|+|||.|+ +.|-|.++|.+.|.
T Consensus 32 N~v~SP~si~~~La~l~~ga~g~T~~el~~~L~ 64 (376)
T d1k9oi_ 32 NVVLSAFSVLPPLGQLALASVGESHDELLRALA 64 (376)
T ss_dssp CEEECSGGGHHHHHHHTTTBCTHHHHHHHHHTT
T ss_pred eEEECHHHHHHHHHHHHHhcChHHHHHHHHHcC
Confidence 3689999999988 56888889988884
Done!