BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11632
(450 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R8E3|GLCM_PONAB Glucosylceramidase OS=Pongo abelii GN=GBA PE=2 SV=1
Length = 536
Score = 275 bits (704), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 217/379 (57%), Gaps = 35/379 (9%)
Query: 85 LLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQ 144
LLL + + GI Y RVP+ CDFS R YTY D P+D +L F+L ED + KIPLI
Sbjct: 142 LLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIH 201
Query: 145 QANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQ----YYQTWAQYLIMFLDFYKR 200
+A +L P+ L+ S W++P W+KTN A+ G+G LK Q Y+QTWA+Y + FLD Y
Sbjct: 202 RALQLARRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAE 261
Query: 201 EQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATK 260
+L FWA+T NEP G L + F +G+ P+ +IA +LGPTL +S H+ +
Sbjct: 262 HKLQFWAVTAENEPSAGLLSGY-----PFQCLGFTPEHQRDFIARDLGPTLANSTHHNVR 316
Query: 261 ILAIDDQRFVLPWWLEQVC----------NIGLRMFQDKLPIPEKILRKDIPSMNVVERK 310
+L +DDQR +LP W + V I + + D L P K + E
Sbjct: 317 LLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFL-APAK--------ATLGETH 367
Query: 311 YLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWN 370
+LF +L FA + K W+ V+LGSW R QY II NL + +V W +WN
Sbjct: 368 HLFPNTML----FAS-EACVGSKFWEQ-SVRLGSWDRGMQYSHSIITNLLYHVVGWTDWN 421
Query: 371 LALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGS-RVLKANSRSR 429
LALN +GG NW NF+D+PIIV+ KD FYKQPMFY +GHFS+FI GS RV S+
Sbjct: 422 LALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKN 481
Query: 430 TVEVLATIDKDENHVVVVL 448
++ +A + D + VVVVL
Sbjct: 482 DLDTVALMHPDGSAVVVVL 500
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 1 MGWSPFALAKRVGDSLGPTIKTS-NLATKIFMLDDQKVPLPWFITLMTADNSKVESYIDG 59
+G++P + LGPT+ S + ++ MLDDQ++ LP + ++ D + Y+ G
Sbjct: 288 LGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTD-PEAAKYVHG 346
Query: 60 VGIHWYWDQFIPV-TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYD 118
+ +HWY D P + H +P +L +EA +G + V +G D + Y++
Sbjct: 347 IAVHWYLDFLAPAKATLGETHHLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQ-YSHS 405
Query: 119 DIPN 122
I N
Sbjct: 406 IITN 409
>sp|P04062|GLCM_HUMAN Glucosylceramidase OS=Homo sapiens GN=GBA PE=1 SV=3
Length = 536
Score = 274 bits (701), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 216/379 (56%), Gaps = 35/379 (9%)
Query: 85 LLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQ 144
LLL + + GI Y RVP+ CDFS R YTY D P+D +L F+L ED + KIPLI
Sbjct: 142 LLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIH 201
Query: 145 QANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQ----YYQTWAQYLIMFLDFYKR 200
+A +L P+ L+ S W++P W+KTN A+ G+G LK Q Y+QTWA+Y + FLD Y
Sbjct: 202 RALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAE 261
Query: 201 EQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATK 260
+L FWA+T NEP G L + F +G+ P+ +IA +LGPTL +S H+ +
Sbjct: 262 HKLQFWAVTAENEPSAGLLSGY-----PFQCLGFTPEHQRDFIARDLGPTLANSTHHNVR 316
Query: 261 ILAIDDQRFVLPWWLEQVC----------NIGLRMFQDKLPIPEKILRKDIPSMNVVERK 310
+L +DDQR +LP W + V I + + D L P K + E
Sbjct: 317 LLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFL-APAK--------ATLGETH 367
Query: 311 YLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWN 370
LF +L FA + K W+ V+LGSW R QY II NL + +V W +WN
Sbjct: 368 RLFPNTML----FAS-EACVGSKFWEQ-SVRLGSWDRGMQYSHSIITNLLYHVVGWTDWN 421
Query: 371 LALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGS-RVLKANSRSR 429
LALN +GG NW NF+D+PIIV+ KD FYKQPMFY +GHFS+FI GS RV S+
Sbjct: 422 LALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKN 481
Query: 430 TVEVLATIDKDENHVVVVL 448
++ +A + D + VVVVL
Sbjct: 482 DLDAVALMHPDGSAVVVVL 500
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 1 MGWSPFALAKRVGDSLGPTIKTS-NLATKIFMLDDQKVPLPWFITLMTADNSKVESYIDG 59
+G++P + LGPT+ S + ++ MLDDQ++ LP + ++ D + Y+ G
Sbjct: 288 LGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTD-PEAAKYVHG 346
Query: 60 VGIHWYWDQFIPV-TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYD 118
+ +HWY D P + H+ +P +L +EA +G + V +G D + Y++
Sbjct: 347 IAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQ-YSHS 405
Query: 119 DIPN 122
I N
Sbjct: 406 IITN 409
>sp|Q9BDT0|GLCM_PANTR Glucosylceramidase OS=Pan troglodytes GN=GBA PE=3 SV=1
Length = 536
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 216/379 (56%), Gaps = 35/379 (9%)
Query: 85 LLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQ 144
LLL + + GI Y RVP+ CDFS R YTY D P+D +L F+L ED + KIPLI
Sbjct: 142 LLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIH 201
Query: 145 QANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQ----YYQTWAQYLIMFLDFYKR 200
+A +L P+ L+ S W++P W+KTN A+ G+G LK Q Y+QTWA+Y + FLD Y
Sbjct: 202 RALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAE 261
Query: 201 EQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATK 260
+L FWA+T NEP G L + F +G+ P+ +IA +LGPTL +S H+ +
Sbjct: 262 HKLQFWAVTAENEPSAGLLSGY-----PFQCLGFTPEHQRDFIARDLGPTLANSTHHNVR 316
Query: 261 ILAIDDQRFVLPWWLEQVC----------NIGLRMFQDKLPIPEKILRKDIPSMNVVERK 310
+L +DDQR +LP W + V I + + D L P K + E
Sbjct: 317 LLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFL-APAK--------ATLGETH 367
Query: 311 YLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWN 370
LF +L FA + K W+ V+LGSW R QY II NL + +V W +WN
Sbjct: 368 RLFPNTML----FAS-EACVGSKFWEQ-SVRLGSWDRGMQYSHSIITNLLYHVVGWTDWN 421
Query: 371 LALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGS-RVLKANSRSR 429
LALN +GG NW NF+D+PIIV+ KD FYKQPMFY +GHFS+FI GS RV S+
Sbjct: 422 LALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKN 481
Query: 430 TVEVLATIDKDENHVVVVL 448
++ +A + D + VVVVL
Sbjct: 482 DLDAVALMHPDGSAVVVVL 500
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 1 MGWSPFALAKRVGDSLGPTIKTS-NLATKIFMLDDQKVPLPWFITLMTADNSKVESYIDG 59
+G++P + LGPT+ S + ++ MLDDQ++ LP + ++ D + Y+ G
Sbjct: 288 LGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTD-PEAAKYVHG 346
Query: 60 VGIHWYWDQFIPV-TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYD 118
+ +HWY D P + H+ +P +L +EA +G + V +G D + Y++
Sbjct: 347 IAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQ-YSHS 405
Query: 119 DIPN 122
I N
Sbjct: 406 IITN 409
>sp|P17439|GLCM_MOUSE Glucosylceramidase OS=Mus musculus GN=Gba PE=1 SV=1
Length = 515
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/380 (41%), Positives = 213/380 (56%), Gaps = 36/380 (9%)
Query: 84 RLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLI 143
+LLL + ++ GI Y RVP+ CDFS R YTY D PND +L F+L ED + KIPLI
Sbjct: 121 KLLLRSYFSTNGIEYNIIRVPMASCDFSIRVYTYADTPNDFQLSNFSLPEEDTKLKIPLI 180
Query: 144 QQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQ----YYQTWAQYLIMFLDFYK 199
QA ++ P+ L S W++P W+KTN + G+G LK Q ++QTWA Y + FLD Y
Sbjct: 181 HQALKMSSRPISLFASPWTSPTWLKTNGRVNGKGSLKGQPGDIFHQTWANYFVKFLDAYA 240
Query: 200 REQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNAT 259
+ L FWA+T NEP G + F +G+ P+ +I+ +LGP L +S H+
Sbjct: 241 KYGLRFWAVTAENEPTAGLFTGY-----PFQCLGFTPEHQRDFISRDLGPALANSSHD-V 294
Query: 260 KILAIDDQRFVLPWWLEQVCN----------IGLRMFQDKLPIPEKILRKDIPSMNVVER 309
K+L +DDQR +LP W E V + I + + D L P K + E
Sbjct: 295 KLLMLDDQRLLLPRWAEVVLSDPEAAKYVHGIAVHWYMDFL-APAK--------ATLGET 345
Query: 310 KYLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEW 369
LF +L FA + K W+ V+LGSW R QY II NL + + W +W
Sbjct: 346 HRLFPNTML----FAS-EACVGSKFWEQ-SVRLGSWDRGMQYSHSIITNLLYHVTGWTDW 399
Query: 370 NLALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGS-RVLKANSRS 428
NLALN +GG NW NF+D+PIIV+ KD FYKQPMFY +GHFS+FI GS RV S S
Sbjct: 400 NLALNPEGGPNWVRNFVDSPIIVDIPKDAFYKQPMFYHLGHFSKFIPEGSQRVALVASES 459
Query: 429 RTVEVLATIDKDENHVVVVL 448
+E +A + D + VVVVL
Sbjct: 460 TDLETVALLRPDGSAVVVVL 479
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 1 MGWSPFALAKRVGDSLGPTIKTSNLATKIFMLDDQKVPLPWFITLMTADNSKVESYIDGV 60
+G++P + LGP + S+ K+ MLDDQ++ LP + ++ +D + Y+ G+
Sbjct: 268 LGFTPEHQRDFISRDLGPALANSSHDVKLLMLDDQRLLLPRWAEVVLSD-PEAAKYVHGI 326
Query: 61 GIHWYWDQFIPV-TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDD 119
+HWY D P + H+ +P +L +EA +G + V +G D + Y++
Sbjct: 327 AVHWYMDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQ-YSHSI 385
Query: 120 IPN 122
I N
Sbjct: 386 ITN 388
>sp|Q2KHZ8|GLCM_BOVIN Glucosylceramidase OS=Bos taurus GN=GBA PE=2 SV=1
Length = 536
Score = 268 bits (685), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 212/379 (55%), Gaps = 35/379 (9%)
Query: 85 LLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQ 144
LLL + + GI Y RVP+ CDFS R YTYDD P+D +L F+L ED + KIPLI
Sbjct: 142 LLLKSYFSEEGIEYNIIRVPMASCDFSIRTYTYDDSPDDFQLLNFSLPEEDVKLKIPLIH 201
Query: 145 QANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQ----YYQTWAQYLIMFLDFYKR 200
QA L + L S W++P W+KTN A+ G+G LK Q Y++TWA+Y + FLD Y
Sbjct: 202 QALELANRSVSLFASPWTSPTWLKTNGAVNGKGTLKGQAGDLYHKTWARYFVKFLDAYAE 261
Query: 201 EQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATK 260
+L FWA+T NEP G L + F +G+ P+ +IA +LGP L +S H +
Sbjct: 262 HKLRFWAVTAENEPTAGLLTGY-----PFQCLGFTPEHQRDFIARDLGPILANSTHRDVR 316
Query: 261 ILAIDDQRFVLPWWLEQVC----------NIGLRMFQDKLPIPEKILRKDIPSMNVVERK 310
+L +DDQR +LP W + V I + + D L P K + E
Sbjct: 317 LLMLDDQRLLLPRWAQVVLADPEAAKYVHGIAVHWYLDFL-APAK--------ATLGETH 367
Query: 311 YLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWN 370
LF +L FA + K W+ V+LGSW R +Y II NL + +V W +WN
Sbjct: 368 RLFPNTML----FAS-EACVGSKFWEQ-SVRLGSWDRGMRYSHSIITNLLYHVVGWTDWN 421
Query: 371 LALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGS-RVLKANSRSR 429
LALN +GG NW NF+D+PIIV+ AKD FYKQPMFY +GHFS+FI GS RV S+
Sbjct: 422 LALNPEGGPNWVRNFVDSPIIVDIAKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASKKS 481
Query: 430 TVEVLATIDKDENHVVVVL 448
++ +A + D + V VVL
Sbjct: 482 DLDTVALLRPDGSAVAVVL 500
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 1 MGWSPFALAKRVGDSLGPTIKTS-NLATKIFMLDDQKVPLPWFITLMTADNSKVESYIDG 59
+G++P + LGP + S + ++ MLDDQ++ LP + ++ AD + Y+ G
Sbjct: 288 LGFTPEHQRDFIARDLGPILANSTHRDVRLLMLDDQRLLLPRWAQVVLAD-PEAAKYVHG 346
Query: 60 VGIHWYWDQFIPV-TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYD 118
+ +HWY D P + H+ +P +L +EA +G + V +G D R Y++
Sbjct: 347 IAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMR-YSHS 405
Query: 119 DIPN 122
I N
Sbjct: 406 IITN 409
>sp|Q70KH2|GLCM_PIG Glucosylceramidase OS=Sus scrofa GN=GBA PE=3 SV=1
Length = 536
Score = 268 bits (684), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 212/379 (55%), Gaps = 35/379 (9%)
Query: 85 LLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQ 144
LLL + + GI Y RVP+ CDFS R YTY D P+D +L F+L ED + KIPLI
Sbjct: 142 LLLKSYFSEEGIEYNIIRVPMASCDFSIRIYTYADTPDDFQLLNFSLPEEDVKLKIPLIH 201
Query: 145 QANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELK----TQYYQTWAQYLIMFLDFYKR 200
QA ++ P+ L S W++P W+KTN A+ G+G LK +Y+QTWA+Y + FLD Y
Sbjct: 202 QALKMAQRPVSLFASPWTSPTWLKTNGAVNGKGTLKGHPGDRYHQTWAKYFVKFLDAYAE 261
Query: 201 EQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATK 260
L FWA+T NEP G + F +G+ P+ +IA + GPTL +S H +
Sbjct: 262 HNLHFWAVTAENEPSAGLFTGY-----PFQCLGFTPEHQRDFIARDPGPTLANSTHRNVR 316
Query: 261 ILAIDDQRFVLPWWLEQVC----------NIGLRMFQDKLPIPEKILRKDIPSMNVVERK 310
+L +DDQR +LP W + V I + + D L P K + E
Sbjct: 317 LLMLDDQRLLLPHWAQVVLADPEAAKYVHGIAVHWYLDFL-APAK--------ATLGETH 367
Query: 311 YLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWN 370
LF +L FA + K W+ V+LGSW R QY II NL + +V W +WN
Sbjct: 368 RLFPNTML----FAS-EACVGSKFWEQ-SVRLGSWDRGVQYSHSIITNLLYHVVGWTDWN 421
Query: 371 LALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGS-RVLKANSRSR 429
LALN +GG NW NF+D+PIIV+ +KD FYKQPMFY +GHFS+FI GS RV A S
Sbjct: 422 LALNPEGGPNWVRNFVDSPIIVDISKDTFYKQPMFYHLGHFSKFIPEGSQRVGLAASEKN 481
Query: 430 TVEVLATIDKDENHVVVVL 448
++ +A + D + VVVVL
Sbjct: 482 NLDTVALLRPDGSAVVVVL 500
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 1 MGWSPFALAKRVGDSLGPTIKTS-NLATKIFMLDDQKVPLPWFITLMTADNSKVESYIDG 59
+G++P + GPT+ S + ++ MLDDQ++ LP + ++ AD + Y+ G
Sbjct: 288 LGFTPEHQRDFIARDPGPTLANSTHRNVRLLMLDDQRLLLPHWAQVVLAD-PEAAKYVHG 346
Query: 60 VGIHWYWDQFIPV-TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYD 118
+ +HWY D P + H+ +P +L +EA +G + V +G D + Y++
Sbjct: 347 IAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGVQ-YSHS 405
Query: 119 DIPN 122
I N
Sbjct: 406 IITN 409
>sp|Q9UB00|GLCM4_CAEEL Putative glucosylceramidase 4 OS=Caenorhabditis elegans GN=gba-4
PE=3 SV=2
Length = 519
Score = 239 bits (610), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 220/412 (53%), Gaps = 52/412 (12%)
Query: 55 SYIDGVGIHWYWDQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRA 114
++ D GI+ + +P T+ D + ++Y + G+ Y FGRVP+ DFST
Sbjct: 105 AFTDAAGINM---KMLPQTMQDQIIQQY--------FSDDGLGYVFGRVPMASTDFSTHE 153
Query: 115 YTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALT 174
Y+YDD+ D L+ FNLT ED QYKIP I++A G L+L + WS+P WMKT+ +
Sbjct: 154 YSYDDVKFDFDLKNFNLTVEDLQYKIPFIKKAMTASGGKLKLFATPWSSPGWMKTSGRMV 213
Query: 175 GRGEL----KTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFN 230
G GEL +YYQTWAQY + F + Y + + FW+LT NEP G P + K+
Sbjct: 214 GAGELLGDQNGKYYQTWAQYFVKFFEAYHAQGIDFWSLTPQNEPTTGIDPLW-----KWQ 268
Query: 231 SMGWHPKSVATWIANNLGPTLRSSQHNAT-KILAIDDQRFVLPWW----------LEQVC 279
++ + +I LGP L SS KI+ DDQR LP W + V
Sbjct: 269 TLFFDASMERNFIKKLLGPALASSPVTKNLKIMINDDQRINLPHWPNVILTDPTAAQYVH 328
Query: 280 NIGLRMFQDKLPIPEKILRKDIPSMNVVERKYLFKLYILVYTAFAGIKGLF-SDKPWDLI 338
I + ++D + P+ + E F Y L+ T G F +D P
Sbjct: 329 GIAIHWYEDFID----------PATVLTETHEKFPDYFLLAT--EACAGYFPADGP---- 372
Query: 339 KVQLGSWSRAEQYISDIIENLNHGLVAWLEWNLALNTQGGTNWKNNFLDAPIIVNAAKDE 398
+LGSWSRAEQY +D+I+++ + + W++WN L+ QGG N NF+D+ IIVNA E
Sbjct: 373 --KLGSWSRAEQYANDLIKDMGNWVGGWVDWNYILDLQGGPNLAKNFVDSTIIVNATAQE 430
Query: 399 FYKQPMFYAIGHFSRFIKPGSRVLKAN--SRSRTVEVLATIDKDENHVVVVL 448
+YKQP+++ + FS+F+KPG+ + N +S VE L+ +++D VV+L
Sbjct: 431 YYKQPIWHVMAQFSKFVKPGAIRVGINIIEKSVDVEGLSFLNQDGTKTVVLL 482
>sp|O16580|GLCM1_CAEEL Putative glucosylceramidase 1 OS=Caenorhabditis elegans GN=gba-1
PE=1 SV=2
Length = 523
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 221/432 (51%), Gaps = 55/432 (12%)
Query: 40 PWFITLMTADNSKVESYIDGVGIHWYWD------QFIPVTVVDTVHKKYPRLLLINTEAS 93
P+ MT D+SK I G G + D + +P + D + K+Y +
Sbjct: 81 PFGTLHMTIDSSKKYQTIQGFG-STFSDASGANLKSLPDKLSDLIMKQY--------FSD 131
Query: 94 IGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEP 153
G++ FGRVPI DFS R Y+Y+D+ ND ++ FNLT EDFQ+KIP I+ A +
Sbjct: 132 TGLNLQFGRVPIASTDFSGRVYSYNDVANDYSMQNFNLTKEDFQWKIPYIKNAQKYNPN- 190
Query: 154 LRLVGSAWSAPAWMKTNNALTGRGELKTQ----YYQTWAQYLIMFLDFYKREQLSFWALT 209
L+L + W+AP W+KT +TG G L + Y+Q +A+Y + FL+ Y + +SFW L+
Sbjct: 191 LKLFAAPWAAPGWLKTTKEMTGPGALNGKAGDNYHQAYAKYFVRFLEEYGKSGISFWGLS 250
Query: 210 TGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTL-RSSQHNATKILAIDDQR 268
T N+P G K S + ++ +I +LGP L SS K+L +DD R
Sbjct: 251 TQNQPTLGSDKK-----NKIQSTLFTAETQRDFIKTDLGPALAASSSGKDVKLLILDDNR 305
Query: 269 FVLPWWLEQVCN----------IGLRMFQDKLPIPEKILRKDIPSMNVVERKYLFKLYIL 318
LP W + V N IG+ +QD + ++ +K+ +IL
Sbjct: 306 GNLPKWADTVLNDMDAAKYVGGIGVHAYQDG---------ETDNHLDETHKKHP-NFFIL 355
Query: 319 VYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWNLALNTQGG 378
A G + K V G+W RA SDI++N+N+ + W E NL L+ GG
Sbjct: 356 GTEASEG----YGSKD---THVDYGNWDRAADTASDILDNMNNWMTGWTERNLILDALGG 408
Query: 379 TNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGS-RVLKA-NSRSRTVEVLAT 436
+W +++ DAP+I A +FYKQPMFYAI HFS FIKPG+ R+ + N VE A
Sbjct: 409 PSWVSDYTDAPVIAFPAMAQFYKQPMFYAIAHFSHFIKPGAVRIDHSLNVIELEVETTAF 468
Query: 437 IDKDENHVVVVL 448
++ D + V+V+L
Sbjct: 469 LNPDGSKVIVML 480
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 16 LGPTIKTSNLA--TKIFMLDDQKVPLP-WFITLMTADNSKVESYIDGVGIHWYWDQFIPV 72
LGP + S+ K+ +LDD + LP W T++ ++ Y+ G+G+H Y D
Sbjct: 283 LGPALAASSSGKDVKLLILDDNRGNLPKWADTVL--NDMDAAKYVGGIGVHAYQDGETD- 339
Query: 73 TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCD 109
+D HKK+P ++ TEAS G V G D
Sbjct: 340 NHLDETHKKHPNFFILGTEASEGYGSKDTHVDYGNWD 376
>sp|G5ECR8|GLCM3_CAEEL Putative glucosylceramidase 3 OS=Caenorhabditis elegans GN=gba-3
PE=3 SV=1
Length = 522
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 188/360 (52%), Gaps = 20/360 (5%)
Query: 95 GISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPL 154
G+ Y GRVPI CDFST Y+YDD+ +D +L+ F L ED + KIP I++A +
Sbjct: 139 GLEYNIGRVPIASCDFSTHEYSYDDVHDDFELKHFALPDEDLKLKIPFIKKAIEKTEGNI 198
Query: 155 RLVGSAWSAPAWMKTNNALTGRGELKT--QYYQTWAQYLIMFLDFYKREQLSFWALTTGN 212
+L S WSAP WMK + G G ++ + YQ +A Y F + Y ++FW LT N
Sbjct: 199 QLFASPWSAPGWMKVTGRMRGGGAMRNDKRVYQAYADYFFKFFEAYSSHAITFWGLTIQN 258
Query: 213 EPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNAT-KILAIDDQRFVL 271
EP G ++ ++ +M + +++ ++ LGP L+ ++ T K++ +DD R +L
Sbjct: 259 EPSTGADMAW-----RWQTMNYTAETMRDFLKKYLGPKLKENKLTETLKVMVLDDGRGLL 313
Query: 272 PWWLEQVCNI-GLRMFQDKLPIP-EKILRKDIPSMNVVERKYLFKLYILVYTAFAGIKGL 329
P W + + N + D + + L +++ +R + K +I A AG G
Sbjct: 314 PGWADTIFNDPEATKYADGVAVHWYGNLYSPAVLLDITQRHHPTK-FIFGTEACAGYFGH 372
Query: 330 FSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWNLALNTQGGTNWKNNFLDAP 389
+G W RAE Y DII +LNH + W +WNL L+ GG NW N +D+P
Sbjct: 373 HGP--------IMGDWFRAESYADDIITDLNHHVTGWTDWNLCLDETGGPNWAYNVVDSP 424
Query: 390 IIVNAAKDEFYKQPMFYAIGHFSRFIKPGS-RVLKANSRSRTVEVLATIDKDENHVVVVL 448
IIVN EFYKQPMFYA+GHFS+F+ GS RV + V + + + V+L
Sbjct: 425 IIVNRTAQEFYKQPMFYALGHFSKFLPRGSTRVFTKIEGNLAVSATSVVIEGGRRATVIL 484
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 16 LGPTIKTSNLAT--KIFMLDDQKVPLP-WFITLMTADNSKVESYIDGVGIHWYWDQFIPV 72
LGP +K + L K+ +LDD + LP W T+ ++ + Y DGV +HWY + + P
Sbjct: 288 LGPKLKENKLTETLKVMVLDDGRGLLPGWADTIF--NDPEATKYADGVAVHWYGNLYSPA 345
Query: 73 TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPND 123
++D + +P + TEA G Y PI G F +Y DDI D
Sbjct: 346 VLLDITQRHHPTKFIFGTEACAG--YFGHHGPIMGDWFRAESYA-DDIITD 393
>sp|O16581|GLCM2_CAEEL Putative glucosylceramidase 2 OS=Caenorhabditis elegans GN=gba-2
PE=3 SV=2
Length = 516
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 219/424 (51%), Gaps = 57/424 (13%)
Query: 47 TADNSKVESYIDGVGIHWYWD------QFIPVTVVDTVHKKYPRLLLINTEASIGISYAF 100
T D+SK I G G + D + +P + DT+ ++Y + G++ F
Sbjct: 88 TIDSSKTYQTIQGFG-STFSDASGANLKSLPDQMADTILRQY--------FSDSGLNLQF 138
Query: 101 GRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSA 160
GRVPI DFS+R YTYDD D + F+L ED+Q+KIP +Q A + + L+
Sbjct: 139 GRVPIASNDFSSRVYTYDDNLEDYNMAHFSLQREDYQWKIPYMQMAQKYNHD-LKFFAVP 197
Query: 161 WSAPAWMKTNNALTGRGEL----KTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPIN 216
WSAP W+KT N+ G G L + Y++++ Y++ FL+ Y++ + FW L+T NEP +
Sbjct: 198 WSAPGWLKTTNSTKGYGILLGTNQDTYHKSYVTYILHFLEEYQKNGILFWGLSTQNEPTS 257
Query: 217 GDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNAT-KILAIDDQRFVLPWWL 275
G K SMG+ + +I ++GP L+SS KIL +DD R LP W
Sbjct: 258 GSDKK-----TKMQSMGFTAEFQRDFIKLDIGPALKSSNAGKNVKILILDDNRGNLPKWA 312
Query: 276 EQVCN----------IGLRMFQDKLPIPEKILRKDIPSMNVVERKYLFKLYILVYTAFAG 325
+ V N I + +QD +K L + + N ++F G
Sbjct: 313 DTVLNDKDAASYVSGIAVHSYQDDE--SDKHLTQ---THNNHPDVFIF-----------G 356
Query: 326 IKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWNLALNTQGGTNWKNNF 385
+ K D V GS+ RAE Y+SDI+++ N+ + W E NL L+ QGG +W + F
Sbjct: 357 TEASEGSKSKD---VDYGSFDRAEDYVSDILDDFNNWVTGWTERNLVLDAQGGPSWVSGF 413
Query: 386 LDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGS-RVLKA-NSRSRTVEVLATIDKDENH 443
DAP+I A +FYKQPMFYAI HFS F+KPG+ R+ + N + +E A ++ D +
Sbjct: 414 ADAPVIAFPALAQFYKQPMFYAIAHFSHFLKPGAVRIDHSLNMPNPEIERSAFLNPDGSK 473
Query: 444 VVVV 447
VVV+
Sbjct: 474 VVVL 477
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 16 LGPTIKTSNLA--TKIFMLDDQKVPLP-WFITLMTADNSKVESYIDGVGIHWYWDQFIPV 72
+GP +K+SN KI +LDD + LP W T++ ++ SY+ G+ +H Y D
Sbjct: 283 IGPALKSSNAGKNVKILILDDNRGNLPKWADTVL--NDKDAASYVSGIAVHSYQDDESDK 340
Query: 73 TVVDTVHKKYPRLLLINTEASIG 95
+ T H +P + + TEAS G
Sbjct: 341 HLTQT-HNNHPDVFIFGTEASEG 362
>sp|Q7M4T0|NEG1_NEUCR Endo-1,6-beta-D-glucanase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=neg-1
PE=1 SV=2
Length = 480
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 162/390 (41%), Gaps = 60/390 (15%)
Query: 84 RLLLINT-EASIGISYAFGRVPIGGCDFSTR-AYTYDDI--PNDKKLEKFNLTTEDFQYK 139
R L+NT + G ++A R I D S AY+YDD D L FNL
Sbjct: 91 RTALLNTLMTTAGANFAMMRHTIASSDLSANPAYSYDDSNGQTDLSLSNFNLGGRG-NAM 149
Query: 140 IPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTG---RGELKTQYYQTWAQYLIMFLD 196
L+ + RL+ L ++GS WS P WMK N A+ G L Y +AQY + +L
Sbjct: 150 ASLLAEMRRLQ-PGLTILGSPWSPPGWMKLNRAIQGTTVNNNLDHAYASQFAQYFVKYLQ 208
Query: 197 FYKREQLSFWALTTGNEPIN--GDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSS 254
Y+ + + A+T NEP+N +P+ + + + I NN+GP LR++
Sbjct: 209 AYQAKGATIDAITIQNEPLNSRAQMPTMYIYADEAGDL----------IQNNIGPALRNA 258
Query: 255 QHNATKILAIDDQRFVLPWWLEQVCNIGLRMFQDKLPIPEKILRKD---IPSM--NVVER 309
+ TKI A D D+ P +L + +P++ +
Sbjct: 259 GLD-TKIWAYDHN-------------------TDQPSYPSTVLSRAGGYVPAVAWHCYAS 298
Query: 310 KYLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEW 369
+ + + A G++ ++ W K Q W+ A + ++N G+ AW+
Sbjct: 299 SLDWSVLTTFHNAHPGVEQYMTEC-WTSAK-QPTPWNWAASFTMGPLQNWASGVTAWV-- 354
Query: 370 NLALNTQGGTNWKN----NFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGSRVLKAN 425
L +T G + + + V+AA + + +Y + FS+F+K G+ V+
Sbjct: 355 -LGTDTNDGPHLTGSDACDKCTGLVTVDAAAGTYNLRGDYYMMAQFSKFMKKGAVVMSGT 413
Query: 426 SR-----SRTVEVLATIDKDENHVVVVLFN 450
+E +A + D+ VVV+ N
Sbjct: 414 GSWTYGDGSGLESVAATNADDGSRVVVIEN 443
>sp|Q8J0I9|GUN16_TRIHA Endo-1,6-beta-D-glucanase BGN16.3 OS=Trichoderma harzianum PE=1
SV=1
Length = 490
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 146/376 (38%), Gaps = 58/376 (15%)
Query: 95 GISYAFGRVPIGGCDFSTR-AYTYDDIPN--DKKLEKFNLTTEDFQYKIPLIQQANRLRG 151
G S++ R IG D S AYTYDD D + FNL L Q +
Sbjct: 113 GASFSLMRHTIGASDLSGDPAYTYDDNGGNADPGMTGFNLGDRGTAMATMLAQM--KGLN 170
Query: 152 EPLRLVGSAWSAPAWMKTNNALTGR--------GELK---TQYYQTWAQYLIMFLDFYKR 200
L++ GS WSAP WMK NNA+ G G L QY +AQY + ++ ++
Sbjct: 171 SNLQIFGSPWSAPGWMKLNNAIDGNTNNNNLNDGYLTNNGAQYSAAFAQYFVKYIQAFES 230
Query: 201 EQLSFWALTTGNEPIN--GDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNA 258
+ A+T NEP+N P+ F + + I N + P L+++ +
Sbjct: 231 HGATINAITLQNEPLNSQAGYPTMYMFSYEQGDL----------IQNYVAPALKAAGL-S 279
Query: 259 TKILAIDDQRFVLPWWLEQVCNIGLRMFQDKLPIPEKILRKDIPSMNVVE-RKYLFKLYI 317
TKI A D D+ PE+++ ++ V Y L
Sbjct: 280 TKIWAYDHNT-------------------DQPDFPEQVMGIAADDVSAVAWHCYATNLDW 320
Query: 318 LVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWNLALNTQG 377
V T F + G+W++A + ++N G+ A W L Q
Sbjct: 321 TVLTNFHNSYPNTDQYMTECWTPSTGAWNQAASFTMGPLQNWARGVAA---WTLGTTAQD 377
Query: 378 GTNWKNNFLDAPI-IVNAAKDEFYKQPMFYAIGHFSRFIKPGSRVLKAN-----SRSRTV 431
G + + +V ++ Q +Y + FS+F+ G+ VL S S V
Sbjct: 378 GPHLSSGGCGTCTGLVTINNGQYTFQTAYYMMAQFSKFMPVGATVLSGTGSYTYSGSGGV 437
Query: 432 EVLATIDKDENHVVVV 447
+ +A+++ D VV+
Sbjct: 438 QSVASLNPDGTRTVVI 453
>sp|A8F0F4|YIDC_RICM5 Membrane protein insertase YidC OS=Rickettsia massiliae (strain
Mtu5) GN=yidC PE=3 SV=1
Length = 560
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 65 YWDQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDK 124
Y D+ +PV +++KY I E ++ I + + PIG D + + Y+YDDI DK
Sbjct: 189 YSDKELPVQSYGLINRKY-----IAVEKAVNILH---QGPIGCIDENLKEYSYDDI-KDK 239
Query: 125 KLEKFNLTTED 135
K EKF + D
Sbjct: 240 KSEKFAASKVD 250
>sp|Q9ZE97|YIDC_RICPR Membrane protein insertase YidC OS=Rickettsia prowazekii (strain
Madrid E) GN=yidC PE=3 SV=1
Length = 560
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +PV +++KY I+ E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 191 DKELPVQSYGLINRKY-----ISLEKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 241
Query: 127 EKFNLTTED 135
KF L+ D
Sbjct: 242 TKFALSKVD 250
>sp|A8GQK8|YIDC_RICRS Membrane protein insertase YidC OS=Rickettsia rickettsii (strain
Sheila Smith) GN=yidC PE=3 SV=1
Length = 560
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +PV +++KY I E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 191 DKELPVQSYGLINRKY-----IAVEKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 241
Query: 127 EKFNLTTED 135
EKF + D
Sbjct: 242 EKFAASKVD 250
>sp|B0BVZ4|YIDC_RICRO Membrane protein insertase YidC OS=Rickettsia rickettsii (strain
Iowa) GN=yidC PE=3 SV=1
Length = 560
Score = 35.8 bits (81), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +PV +++KY I E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 191 DKELPVQSYGLINRKY-----IAVEKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 241
Query: 127 EKFNLTTED 135
EKF + D
Sbjct: 242 EKFAASKVD 250
>sp|C4K168|YIDC_RICPU Membrane protein insertase YidC OS=Rickettsia peacockii (strain
Rustic) GN=yidC PE=3 SV=1
Length = 560
Score = 35.8 bits (81), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +PV +++KY I E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 191 DKELPVQSYGLINRKY-----IAVEKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 241
Query: 127 EKFNLTTED 135
EKF + D
Sbjct: 242 EKFAASKVD 250
>sp|Q92JJ3|YIDC_RICCN Membrane protein insertase YidC OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=yidC PE=3 SV=1
Length = 560
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +PV +++KY I E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 191 DKELPVQSYGLINRKY-----IAVEKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 241
Query: 127 EKFNLTTED 135
EKF + D
Sbjct: 242 EKFAASKVD 250
>sp|Q68XS4|YIDC_RICTY Membrane protein insertase YidC OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=yidC PE=3 SV=1
Length = 558
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +PV +++KY I E ++ I + + PIG D + + Y+YDDI D+K
Sbjct: 189 DKELPVQAYGLINRKY-----IAVEKAVNILH---QGPIGCIDENLKEYSYDDI-KDQKS 239
Query: 127 EKFNLTTED 135
KF L+ D
Sbjct: 240 AKFALSKVD 248
>sp|C3PM83|YIDC_RICAE Membrane protein insertase YidC OS=Rickettsia africae (strain
ESF-5) GN=yidC PE=3 SV=1
Length = 560
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +PV +++KY I E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 191 DKELPVQSYGLINRKY-----IAVEKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 241
Query: 127 EKFNLTTED 135
EKF + D
Sbjct: 242 EKFVASKVD 250
>sp|Q1RKM2|YIDC_RICBR Membrane protein insertase YidC OS=Rickettsia bellii (strain
RML369-C) GN=yidC PE=3 SV=1
Length = 559
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
+Q +PV +++KY + E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 189 NQELPVQSYGLINRKYTAV-----EKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 239
Query: 127 EKFNLTTED 135
EKF+ + D
Sbjct: 240 EKFSASKVD 248
>sp|A8GUC7|YIDC_RICB8 Membrane protein insertase YidC OS=Rickettsia bellii (strain OSU
85-389) GN=yidC PE=3 SV=1
Length = 559
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
+Q +PV +++KY + E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 189 NQELPVQSYGLINRKYTAV-----EKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 239
Query: 127 EKFNLTTED 135
EKF+ + D
Sbjct: 240 EKFSASKVD 248
>sp|Q9HJD4|FEN_THEAC Flap endonuclease 1 OS=Thermoplasma acidophilum (strain ATCC 25905
/ DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=fen
PE=3 SV=1
Length = 336
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 293 PEKILRKDIPSMNVVERKYLFKLYILVYTAF-AGIKGLFSDKPWDLIKVQLGSWSRAEQY 351
PE I+ ++ S N + + L + ILV T F GIKG+ + K LIK + G ++
Sbjct: 205 PEYIILDEVLSANQINQDQLIGIGILVGTDFNEGIKGIGAKKALALIKKE-GDIKSVLKH 263
Query: 352 ISDIIENLNH 361
I IENL+
Sbjct: 264 IGKNIENLDE 273
>sp|A8EXB6|YIDC_RICCK Membrane protein insertase YidC OS=Rickettsia canadensis (strain
McKiel) GN=yidC PE=3 SV=1
Length = 560
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +PV +++KY I E ++ I + + PIG + + + Y+YDDI DKK
Sbjct: 191 DKELPVQSYGLINRKY-----IAVEKAVNILH---QGPIGCINENLKEYSYDDI-KDKKS 241
Query: 127 EKFNLTTED 135
EKF + D
Sbjct: 242 EKFVASKVD 250
>sp|A8GLY9|YIDC_RICAH Membrane protein insertase YidC OS=Rickettsia akari (strain
Hartford) GN=yidC PE=3 SV=1
Length = 560
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +P+ +++KY + E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 191 DKELPIQSYGLINRKYTAV-----EKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 241
Query: 127 EKFNLTTED 135
EKF + D
Sbjct: 242 EKFAASKVD 250
>sp|Q4UN76|YIDC_RICFE Membrane protein insertase YidC OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=yidC PE=3 SV=1
Length = 560
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 67 DQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKL 126
D+ +P+ +++KY + E ++ I + + PIG D + + Y+YDDI DKK
Sbjct: 191 DKELPIQSYGLINRKYTAV-----EKAVNILH---QGPIGCIDENLKEYSYDDI-KDKKS 241
Query: 127 EKFNLTTED 135
EKF + D
Sbjct: 242 EKFAASKVD 250
>sp|P21173|DNAA_MICLU Chromosomal replication initiator protein DnaA OS=Micrococcus
luteus GN=dnaA PE=3 SV=1
Length = 515
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 401 KQPMFYAIGHFSRFIKPGSRVLKANSRSRTVEVLATIDKDE 441
K + +AIGH++R + PG RV NS T + + +I DE
Sbjct: 220 KTHLLHAIGHYARRLYPGLRVRYVNSEEFTNDFINSIRHDE 260
>sp|C5C7X4|DNAA_MICLC Chromosomal replication initiator protein DnaA OS=Micrococcus
luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC
3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) GN=dnaA
PE=3 SV=1
Length = 515
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 401 KQPMFYAIGHFSRFIKPGSRVLKANSRSRTVEVLATIDKDE 441
K + +AIGH++R + PG RV NS T + + +I DE
Sbjct: 220 KTHLLHAIGHYARRLYPGLRVRYVNSEEFTNDFINSIRHDE 260
>sp|Q45070|XYNC_BACSU Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) GN=xynC
PE=1 SV=1
Length = 422
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 156 LVGSAWSAPAWMK---TNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGN 212
+ S W+ P+ M N T LK Y +AQ+L F+ F K ++ +A++ N
Sbjct: 111 VFASPWNPPSDMVETFNRNGDTSAKRLKYNKYAAYAQHLNDFVTFMKNNGVNLYAISVQN 170
Query: 213 EP 214
EP
Sbjct: 171 EP 172
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 174,643,778
Number of Sequences: 539616
Number of extensions: 7605427
Number of successful extensions: 14284
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 14209
Number of HSP's gapped (non-prelim): 51
length of query: 450
length of database: 191,569,459
effective HSP length: 121
effective length of query: 329
effective length of database: 126,275,923
effective search space: 41544778667
effective search space used: 41544778667
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)