Query psy11632
Match_columns 450
No_of_seqs 139 out of 1095
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 23:37:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11632.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11632hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02055 Glyco_hydro_30: O-Gly 100.0 6.9E-95 1.5E-99 756.4 29.2 401 18-450 35-460 (496)
2 KOG2566|consensus 100.0 1.2E-84 2.6E-89 630.1 27.1 401 18-449 59-483 (518)
3 COG5520 O-Glycosyl hydrolase [ 100.0 8.2E-60 1.8E-64 454.0 23.5 336 44-449 34-395 (433)
4 PF14587 Glyco_hydr_30_2: O-Gl 100.0 1.5E-57 3.2E-62 452.6 18.6 327 44-397 2-374 (384)
5 PF02057 Glyco_hydro_59: Glyco 100.0 1.1E-29 2.4E-34 267.1 25.6 321 45-447 26-368 (669)
6 KOG2566|consensus 99.5 5.3E-15 1.1E-19 145.3 2.1 191 1-217 271-466 (518)
7 PF02055 Glyco_hydro_30: O-Gly 99.4 4.8E-14 1E-18 148.4 -2.2 95 1-97 246-342 (496)
8 PF00150 Cellulase: Cellulase 98.7 3.4E-07 7.4E-12 89.3 15.9 232 94-371 31-277 (281)
9 PF11790 Glyco_hydro_cc: Glyco 98.3 3.4E-06 7.3E-11 81.4 11.0 132 202-370 63-211 (239)
10 COG5520 O-Glycosyl hydrolase [ 98.3 5.3E-07 1.2E-11 88.9 3.4 82 1-91 187-270 (433)
11 PF07745 Glyco_hydro_53: Glyco 98.2 8.6E-05 1.9E-09 74.7 17.9 214 136-373 57-298 (332)
12 smart00633 Glyco_10 Glycosyl h 97.7 0.00095 2.1E-08 65.0 14.3 115 127-267 11-127 (254)
13 PF01229 Glyco_hydro_39: Glyco 97.4 0.0053 1.2E-07 65.4 16.5 230 181-449 128-389 (486)
14 smart00813 Alpha-L-AF_C Alpha- 97.1 0.0029 6.3E-08 58.8 9.5 98 342-449 17-123 (189)
15 COG3867 Arabinogalactan endo-1 97.1 0.044 9.5E-07 53.7 17.0 203 73-324 63-285 (403)
16 COG2723 BglB Beta-glucosidase/ 95.8 0.71 1.5E-05 48.4 18.0 104 94-218 69-173 (460)
17 COG5309 Exo-beta-1,3-glucanase 94.8 0.21 4.6E-06 48.3 9.5 152 193-371 120-281 (305)
18 PF06964 Alpha-L-AF_C: Alpha-L 92.7 0.34 7.3E-06 44.3 6.8 93 342-450 17-112 (177)
19 TIGR03356 BGL beta-galactosida 92.1 0.26 5.6E-06 51.7 5.8 101 94-217 64-165 (427)
20 PF00331 Glyco_hydro_10: Glyco 91.9 0.79 1.7E-05 46.2 8.8 230 141-409 63-317 (320)
21 PF02449 Glyco_hydro_42: Beta- 91.5 0.45 9.7E-06 48.9 6.8 104 94-217 20-141 (374)
22 PF03662 Glyco_hydro_79n: Glyc 90.6 0.2 4.3E-06 50.3 3.0 112 199-325 160-296 (319)
23 PRK15014 6-phospho-beta-glucos 84.9 2.8 6.1E-05 44.7 7.5 100 94-216 79-181 (477)
24 PRK13511 6-phospho-beta-galact 84.6 2.4 5.1E-05 45.1 6.8 100 94-217 64-164 (469)
25 PF00232 Glyco_hydro_1: Glycos 84.2 1.2 2.6E-05 47.1 4.4 101 95-216 69-169 (455)
26 PF01301 Glyco_hydro_35: Glyco 83.8 43 0.00092 33.7 15.1 195 71-325 22-234 (319)
27 PRK09852 cryptic 6-phospho-bet 83.6 3.2 6.9E-05 44.2 7.3 103 94-217 81-184 (474)
28 cd00598 GH18_chitinase-like Th 83.5 14 0.0003 34.1 10.8 90 140-256 52-142 (210)
29 PRK09589 celA 6-phospho-beta-g 82.9 2.9 6.2E-05 44.6 6.6 102 94-216 77-179 (476)
30 COG1874 LacA Beta-galactosidas 82.1 12 0.00026 41.5 11.1 128 93-248 39-184 (673)
31 cd06544 GH18_narbonin Narbonin 81.4 19 0.0004 35.1 11.1 121 140-289 58-186 (253)
32 COG3534 AbfA Alpha-L-arabinofu 80.7 80 0.0017 33.3 16.5 322 73-449 49-425 (501)
33 COG4124 ManB Beta-mannanase [C 80.5 22 0.00049 36.0 11.4 159 155-328 132-301 (355)
34 TIGR01233 lacG 6-phospho-beta- 80.5 4.2 9E-05 43.3 6.8 100 94-217 63-163 (467)
35 PRK10150 beta-D-glucuronidase; 80.1 40 0.00088 37.0 14.6 192 183-415 388-595 (604)
36 PRK09593 arb 6-phospho-beta-gl 79.5 5.8 0.00013 42.3 7.5 103 94-217 83-186 (478)
37 PLN02849 beta-glucosidase 79.5 4.5 9.8E-05 43.4 6.7 101 95-217 90-191 (503)
38 PLN02814 beta-glucosidase 78.5 5.1 0.00011 43.0 6.7 102 94-217 87-189 (504)
39 PLN02998 beta-glucosidase 76.7 5.8 0.00013 42.5 6.5 101 95-217 93-194 (497)
40 cd02879 GH18_plant_chitinase_c 75.7 30 0.00065 34.3 11.0 86 139-253 53-141 (299)
41 PRK09852 cryptic 6-phospho-bet 75.6 4 8.6E-05 43.5 4.9 95 308-412 359-466 (474)
42 PRK15014 6-phospho-beta-glucos 71.8 7 0.00015 41.7 5.6 97 307-413 361-471 (477)
43 TIGR03356 BGL beta-galactosida 66.1 13 0.00027 39.1 6.1 78 308-396 330-415 (427)
44 PF12876 Cellulase-like: Sugar 66.0 18 0.00039 28.9 5.7 74 204-286 10-88 (88)
45 cd06545 GH18_3CO4_chitinase Th 65.7 37 0.00079 32.7 8.9 84 181-288 81-165 (253)
46 cd06830 PLPDE_III_ADC Type III 65.1 92 0.002 32.4 12.3 116 127-269 162-285 (409)
47 PF00232 Glyco_hydro_1: Glycos 62.5 7.9 0.00017 41.0 3.8 96 306-412 346-450 (455)
48 cd02873 GH18_IDGF The IDGF's ( 59.9 1.2E+02 0.0027 31.6 12.1 141 140-287 62-221 (413)
49 cd02876 GH18_SI-CLP Stabilin-1 59.3 47 0.001 33.2 8.5 95 141-257 55-149 (318)
50 COG3693 XynA Beta-1,4-xylanase 57.8 2.2E+02 0.0047 28.9 14.8 234 127-409 77-338 (345)
51 cd02872 GH18_chitolectin_chito 57.4 61 0.0013 32.9 9.2 91 139-254 57-150 (362)
52 PF14587 Glyco_hydr_30_2: O-Gl 57.3 5 0.00011 41.3 1.1 145 1-197 195-341 (384)
53 PRK13511 6-phospho-beta-galact 53.9 21 0.00045 38.0 5.2 97 306-412 358-463 (469)
54 cd06548 GH18_chitinase The GH1 53.2 54 0.0012 32.8 7.9 95 139-255 71-169 (322)
55 TIGR01233 lacG 6-phospho-beta- 51.7 22 0.00049 37.8 5.0 95 306-411 357-460 (467)
56 PLN03059 beta-galactosidase; P 50.7 1.2E+02 0.0025 34.8 10.4 118 127-266 90-223 (840)
57 cd06542 GH18_EndoS-like Endo-b 50.1 2.4E+02 0.0051 27.0 11.7 92 180-289 85-179 (255)
58 COG2730 BglC Endoglucanase [Ca 48.7 45 0.00097 34.8 6.6 107 94-216 83-193 (407)
59 PF12891 Glyco_hydro_44: Glyco 48.7 13 0.00028 35.8 2.3 75 182-267 104-181 (239)
60 KOG2806|consensus 47.8 1E+02 0.0022 32.4 9.2 123 139-289 108-245 (432)
61 PF02156 Glyco_hydro_26: Glyco 47.6 1.9E+02 0.004 29.1 10.5 97 183-290 131-234 (311)
62 smart00636 Glyco_18 Glycosyl h 45.4 1.2E+02 0.0025 30.3 8.9 86 142-254 56-142 (334)
63 PLN02998 beta-glucosidase 45.3 37 0.00081 36.4 5.5 93 307-413 384-486 (497)
64 COG3325 ChiA Chitinase [Carboh 44.5 2.2E+02 0.0048 29.9 10.5 109 136-263 110-222 (441)
65 cd02875 GH18_chitobiase Chitob 44.4 1.9E+02 0.004 29.6 10.3 82 141-256 68-150 (358)
66 COG3693 XynA Beta-1,4-xylanase 43.6 32 0.00069 34.7 4.2 58 137-213 171-228 (345)
67 PRK09589 celA 6-phospho-beta-g 43.1 39 0.00084 36.1 5.2 95 308-412 361-469 (476)
68 PLN02814 beta-glucosidase 41.7 49 0.0011 35.6 5.7 91 308-412 380-480 (504)
69 cd02874 GH18_CFLE_spore_hydrol 41.6 1.1E+02 0.0024 30.3 8.0 54 181-256 85-138 (313)
70 PF02449 Glyco_hydro_42: Beta- 41.5 68 0.0015 32.8 6.6 201 179-413 144-369 (374)
71 PLN02849 beta-glucosidase 40.9 43 0.00092 36.1 5.1 94 308-413 378-481 (503)
72 PRK09593 arb 6-phospho-beta-gl 39.1 54 0.0012 35.0 5.5 97 306-412 360-470 (478)
73 KOG0626|consensus 32.6 74 0.0016 34.2 5.1 106 294-416 395-507 (524)
74 KOG0177|consensus 31.1 1.5E+02 0.0033 27.4 6.2 77 185-290 54-138 (200)
75 PF00331 Glyco_hydro_10: Glyco 30.8 78 0.0017 31.8 4.9 57 137-213 156-212 (320)
76 PF00150 Cellulase: Cellulase 30.3 2.2E+02 0.0049 26.9 7.9 66 140-217 24-89 (281)
77 smart00633 Glyco_10 Glycosyl h 30.0 1.2E+02 0.0026 29.1 5.9 56 137-211 103-158 (254)
78 KOG1097|consensus 29.2 2.3E+02 0.005 29.5 7.9 71 182-268 114-187 (399)
79 TIGR00640 acid_CoA_mut_C methy 28.0 1.5E+02 0.0033 25.7 5.6 46 194-264 45-90 (132)
80 PF01261 AP_endonuc_2: Xylose 27.9 3.5E+02 0.0075 24.1 8.4 95 137-266 71-165 (213)
81 PF11455 DUF3018: Protein of 27.2 76 0.0016 24.2 3.0 30 246-278 7-36 (65)
82 cd01836 FeeA_FeeB_like SGNH_hy 26.6 3.5E+02 0.0076 24.0 8.1 97 138-252 92-190 (191)
83 cd06549 GH18_trifunctional GH1 25.9 2.9E+02 0.0062 27.3 7.9 82 182-286 87-169 (298)
84 cd06547 GH85_ENGase Endo-beta- 24.9 1.9E+02 0.0041 29.4 6.5 67 181-268 85-151 (339)
85 PF08534 Redoxin: Redoxin; In 23.9 66 0.0014 27.6 2.6 31 183-214 44-74 (146)
86 PRK02801 primosomal replicatio 23.6 1.1E+02 0.0023 25.3 3.7 36 407-448 58-94 (101)
87 PRK09856 fructoselysine 3-epim 23.5 5.6E+02 0.012 24.4 9.4 78 139-244 92-169 (275)
88 PF13204 DUF4038: Protein of u 23.1 1.3E+02 0.0028 29.8 4.7 70 185-266 84-156 (289)
89 cd01831 Endoglucanase_E_like E 22.9 5.1E+02 0.011 22.6 8.6 120 92-252 50-169 (169)
90 TIGR01464 hemE uroporphyrinoge 22.3 4E+02 0.0086 26.7 8.3 53 183-253 174-226 (338)
91 COG4130 Predicted sugar epimer 22.1 2.4E+02 0.0052 27.0 5.9 48 196-257 90-137 (272)
92 TIGR01464 hemE uroporphyrinoge 21.7 2.8E+02 0.0062 27.7 7.1 56 139-209 182-240 (338)
93 cd01833 XynB_like SGNH_hydrola 21.1 5.2E+02 0.011 22.0 10.2 91 139-250 66-156 (157)
94 PF00704 Glyco_hydro_18: Glyco 21.0 2.1E+02 0.0047 28.2 6.0 124 139-288 60-194 (343)
95 PF02784 Orn_Arg_deC_N: Pyrido 20.7 6.2E+02 0.014 23.9 9.0 110 127-266 133-244 (251)
No 1
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=100.00 E-value=6.9e-95 Score=756.35 Aligned_cols=401 Identities=40% Similarity=0.708 Sum_probs=314.9
Q ss_pred cEEEEecCCCceEEeccCC--CCCCCcceeEEEccCCccceEEEEEEEecCC-----CCCChhHHHHHHHHccchhhccc
Q psy11632 18 PTIKTSNLATKIFMLDDQK--VPLPWFITLMTADNSKVESYIDGVGIHWYWD-----QFIPVTVVDTVHKKYPRLLLINT 90 (450)
Q Consensus 18 p~l~~~~~~~~~~~~d~~~--~~~~~~~~~i~v~~~~~~Q~i~GfG~~~~~~-----~~~~~~~~~~~~~~lf~~~~~~T 90 (450)
..+++++.++.++...... ...+....+|+|+++.++|+|+|||++++++ ..|+++.|+++++.||
T Consensus 35 ~~~y~ts~~g~rl~~~~~~~~~~~~~~~~~i~id~~~~yQ~i~GFGga~Tdasa~~l~~l~~~~r~~ll~~~F------- 107 (496)
T PF02055_consen 35 AAVYTTSKSGARLKQSVGNITNSDPSSSVTITIDPSTTYQTIDGFGGAFTDASAYNLQKLSEEQRDELLRSLF------- 107 (496)
T ss_dssp EEEEEEETTS-ESEEEEEEEBSS--SSSEEEEEEEEEEEEE--EEEEE--HHHHHHHHTS-HHHHHHHHHHHH-------
T ss_pred EEEEEECCccchhhhhhhcccccccccceeeeecccccceEEEEEeeeHHHHHHHHHHhCCHHHHHHHHHHHh-------
Confidence 5677788888777665433 2233345689999999999999999999986 5689999999999999
Q ss_pred cccccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccC
Q psy11632 91 EASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTN 170 (450)
Q Consensus 91 e~~~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n 170 (450)
++.|+|||++|++||+|||+.+.|||+|.++|++|++|++..+|.+++||+||+|++++++ +|||+||||||+|||+|
T Consensus 108 -~~~G~g~s~~R~pIgssDfs~~~Yty~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~~~~-lki~aSpWSpP~WMKtn 185 (496)
T PF02055_consen 108 -SEDGIGYSLLRVPIGSSDFSTRPYTYDDVPGDFNLSNFSIAREDKKYKIPLIKEALAINPN-LKIFASPWSPPAWMKTN 185 (496)
T ss_dssp -STTTT---EEEEEES--SSSSS---ST-STTHTTTTT---HHHHHTTHHHHHHHHHHHHTT--EEEEEES---GGGBTT
T ss_pred -hcCCceEEEEEeeccCcCCcCCcccccCCCCCCccccCCccccchhhHHHHHHHHHHhCCC-cEEEEecCCCCHHHccC
Confidence 7899999999999999999999999999999999999999987878999999999999998 99999999999999999
Q ss_pred CCCCCCCccch----HHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHh
Q psy11632 171 NALTGRGELKT----QYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANN 246 (450)
Q Consensus 171 ~~~~g~G~L~~----~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~ 246 (450)
++++|+|.|+. +||++||+||+|||++|+++||+|++||+||||++...+.+ +||+|.|+++|+++||+++
T Consensus 186 ~~~~g~g~l~g~~~~~y~~~yA~Y~vkfi~aY~~~GI~i~aiT~QNEP~~~~~~~~-----~~~s~~~t~~~~~~Fi~~~ 260 (496)
T PF02055_consen 186 GSMNGGGSLKGSLGDEYYQAYADYFVKFIQAYKKEGIPIWAITPQNEPDNGSDPNY-----PWPSMGWTPEEQADFIKNY 260 (496)
T ss_dssp SSSCSS-BBSCGTTSHHHHHHHHHHHHHHHHHHCTT--ESEEESSSSCCGGGSTT------SSC--B--HHHHHHHHHHT
T ss_pred CcCcCCCccCCCCCchhHHHHHHHHHHHHHHHHHCCCCeEEEeccCCCCCCCCCCC-----CCCcCCCCHHHHHHHHHHH
Confidence 99998788774 79999999999999999999999999999999997532223 8999999999999999999
Q ss_pred hHHHHhcCCC-CCeEEEEecCCCCChhhhHHhhe----------eeEeeecCCCCCChhhhccccCCCchHHHHHHhc-C
Q psy11632 247 LGPTLRSSQH-NATKILAIDDQRFVLPWWLEQVC----------NIGLRMFQDKLPIPEKILRKDIPSMNVVERKYLF-K 314 (450)
Q Consensus 247 L~~~l~~~gl-~~~kI~~~d~~~~~~~~~~~~v~----------~ia~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 314 (450)
|||+|+++++ .++||++.|+++...+.|+..++ |+|+|||++.... ..|. ++|++| +
T Consensus 261 LgP~l~~~~~g~d~kI~~~D~n~~~~~~~~~~il~d~~A~~yv~GiA~HwY~g~~~~--~~l~---------~~h~~~P~ 329 (496)
T PF02055_consen 261 LGPALRKAGLGKDVKILIYDHNRDNLPDYADTILNDPEAAKYVDGIAFHWYGGDPSP--QALD---------QVHNKFPD 329 (496)
T ss_dssp HHHHHHTSTT-TTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTEEEEEEEETTCS-HC--HHHH---------HHHHHSTT
T ss_pred HHHHHHhcCCCCceEEEEEecCCcccchhhhhhhcChhhHhheeEEEEECCCCCchh--hHHH---------HHHHHCCC
Confidence 9999999998 56999999999887888877664 8999999996422 3555 899999 9
Q ss_pred ceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHHHHHhccCchhhhhhhhhhcCCCCCCCCCCccCccEEEeC
Q psy11632 315 LYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWNLALNTQGGTNWKNNFLDAPIIVNA 394 (450)
Q Consensus 315 k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i~~~l~~~~~a~~~W~~~~~~~gg~~~~~~~~~~li~~d~ 394 (450)
|.+|+||.|++ .+.++. ....++|.+|+.+++.|+.+|++++++|++||++||.+|||+|.+++|+++|++|.
T Consensus 330 k~l~~TE~~~g------~~~~~~-~~~~g~w~~~~~y~~~ii~~lnn~~~gw~~WNl~LD~~GGP~~~~n~~d~~iivd~ 402 (496)
T PF02055_consen 330 KFLLFTEACCG------SWNWDT-SVDLGSWDRAERYAHDIIGDLNNWVSGWIDWNLALDENGGPNWVGNFCDAPIIVDS 402 (496)
T ss_dssp SEEEEEEEESS-------STTS--SS-TTHHHHHHHHHHHHHHHHHTTEEEEEEEESEBETTS---TT---B--SEEEEG
T ss_pred cEEEeeccccC------CCCccc-ccccccHHHHHHHHHHHHHHHHhhceeeeeeeeecCCCCCCcccCCCCCceeEEEc
Confidence 99999999987 344442 23568899999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEchhhHhhhhhccccCCCCE-EEeecCC-CCceeEEEEEcCCCCEEEEEEeC
Q psy11632 395 AKDEFYKQPMFYAIGHFSRFIKPGSR-VLKANSR-SRTVEVLATIDKDENHVVVVLFN 450 (450)
Q Consensus 395 ~~g~~~~~~~yy~~g~fsrfvrPG~~-i~~~~~~-~~~v~~~A~~~~dg~~vvVv~nn 450 (450)
++++++++++||+|||||||||||++ |+++.+. ..+|+++||++|||++||||+|.
T Consensus 403 ~~~~~~~~p~yY~~gHfSKFV~PGa~RI~st~~~~~~~l~~vAF~nPDGs~vvVv~N~ 460 (496)
T PF02055_consen 403 DTGEFYKQPEYYAMGHFSKFVRPGAVRIGSTSSSSDSGLEAVAFLNPDGSIVVVVLNR 460 (496)
T ss_dssp GGTEEEE-HHHHHHHHHHTTS-TT-EEEEEEESSSTTTEEEEEEEETTSEEEEEEEE-
T ss_pred CCCeEEEcHHHHHHHHHhcccCCCCEEEEeeccCCCCceeEEEEECCCCCEEEEEEcC
Confidence 99999999999999999999999999 9988753 34899999999999999999984
No 2
>KOG2566|consensus
Probab=100.00 E-value=1.2e-84 Score=630.06 Aligned_cols=401 Identities=41% Similarity=0.712 Sum_probs=366.7
Q ss_pred cEEEEecCCCceEEeccCC--CCCCCcceeEEEccCCccceEEEEEEEecCC-----CCCChhHHHHHHHHccchhhccc
Q psy11632 18 PTIKTSNLATKIFMLDDQK--VPLPWFITLMTADNSKVESYIDGVGIHWYWD-----QFIPVTVVDTVHKKYPRLLLINT 90 (450)
Q Consensus 18 p~l~~~~~~~~~~~~d~~~--~~~~~~~~~i~v~~~~~~Q~i~GfG~~~~~~-----~~~~~~~~~~~~~~lf~~~~~~T 90 (450)
..+++++.++.||-.+.-+ ...|-....++|+.++++|+|.|||++++++ ..|++..++.|++.||
T Consensus 59 a~~ytsS~~G~Rl~r~~i~at~t~~~~~~~~tidssq~fQ~i~GFG~aftDaag~n~ksL~~~~q~~il~~YF------- 131 (518)
T KOG2566|consen 59 AAVYTSSRSGARLHRSVIKATHTGPSTGLHLTIDSSQKFQTIQGFGGAFTDAAGANLKSLSDTLQNLILKSYF------- 131 (518)
T ss_pred eEEEEecCcchhhhhhhhhhcccCCccceEEEEcchhhceeeeccccccccccccchhhCCHHHHHHHHHHhh-------
Confidence 5678888999888766555 2233344579999999999999999999986 5679999999999999
Q ss_pred cccccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccC
Q psy11632 91 EASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTN 170 (450)
Q Consensus 91 e~~~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n 170 (450)
+.+|||++|.|++|.+||||.++|||||++.|+.|.+|++..||.++.||+||.|++++...+|+||+|||+|.|||++
T Consensus 132 -sd~Gl~y~~gRVPiAS~DFS~r~YsYdDv~~Df~l~nF~L~~ED~q~KIP~ik~A~~~~~~~lklfAsPWsaPgWlKtt 210 (518)
T KOG2566|consen 132 -SDEGLGYNIGRVPIASCDFSTREYSYDDVPDDFQLKNFSLPEEDLKLKIPFIKKAQKYNQGNLKLFASPWSAPGWLKTT 210 (518)
T ss_pred -cccCccceeeeeeecccccccceeeccCCcccccccccCCchhhheeecHHHHHHHHhcCCCceEEecCCCCCceeeec
Confidence 8999999999999999999999999999999999999999999999999999999999844599999999999999999
Q ss_pred CCCCCCCccch----HHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHh
Q psy11632 171 NALTGRGELKT----QYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANN 246 (450)
Q Consensus 171 ~~~~g~G~L~~----~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~ 246 (450)
+.++|+|.|+. .|||+||+|+++|.++|.++||.||++|+||||.....+.+ +|.++.+|++-|++|||..
T Consensus 211 g~m~G~G~l~g~~~d~yhqtya~YfvkFleaY~~~gi~FWglt~qNEPstG~d~~~-----k~Qtl~ftae~qRdFik~d 285 (518)
T KOG2566|consen 211 GRMNGKGALLGDPGDIYHQTYARYFVKFLEAYAKHGIQFWGLTTQNEPSTGSDKKW-----KWQTLGFTAETQRDFIKKD 285 (518)
T ss_pred ccccccccccCCCCchhHHHHHHHHHHHHHHHHhcCceEEeecccCCCCcCcccCC-----ceeecccCHHHHHHHHHHh
Confidence 99999998886 59999999999999999999999999999999998776655 8999999999999999999
Q ss_pred hHHHHhcCCC-CCeEEEEecCCCCChhhhHHhhe----------eeEeeecCCCCCChhhhccccCCCchHHHHHHhc-C
Q psy11632 247 LGPTLRSSQH-NATKILAIDDQRFVLPWWLEQVC----------NIGLRMFQDKLPIPEKILRKDIPSMNVVERKYLF-K 314 (450)
Q Consensus 247 L~~~l~~~gl-~~~kI~~~d~~~~~~~~~~~~v~----------~ia~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 314 (450)
|||+|++... +++||++.|+++..+|.|++.|+ |||+|+|.....+. ..|. +.|+.+ +
T Consensus 286 LGPaLa~s~~~knvkllilDD~Rg~LP~WadtvlnDpeAakYv~GIaVHwY~df~~pa-~~L~---------eTh~~hP~ 355 (518)
T KOG2566|consen 286 LGPALASSKTTKNVKLLILDDQRGLLPHWADTVLNDPEAAKYVHGIAVHWYQDFLEPA-KHLD---------ETHRKHPN 355 (518)
T ss_pred cchhhhcCCcCCceEEEEecCCccCCCccchhhccChhhhhhccceEEEeeccccChh-hhhh---------hHHhhCCC
Confidence 9999999854 46999999999999999998876 89999999855332 5666 899999 9
Q ss_pred ceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHHHHHhccCchhhhhhhhhhcCCCCCCCCCCccCccEEEeC
Q psy11632 315 LYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWNLALNTQGGTNWKNNFLDAPIIVNA 394 (450)
Q Consensus 315 k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i~~~l~~~~~a~~~W~~~~~~~gg~~~~~~~~~~li~~d~ 394 (450)
+.|.-||.|.| +.++++ ++.|+|.+|+++|++|+.+|++++++|..||++||.+|||+|+.|+.|++|++++
T Consensus 356 ~fifgTEAc~G------y~~~d~--v~~Gswdrae~yasdii~dlnn~vtGWtdwNl~Ld~~GGP~wv~nfvDspiIv~~ 427 (518)
T KOG2566|consen 356 TFIFGTEACAG------YKSKDG--VDLGSWDRAEQYASDIITDLNNHVTGWTDWNLILDAQGGPNWVSNFVDSPIIVNP 427 (518)
T ss_pred eEEEeehhccc------cccccC--ccccchhhHHHHHHHHHHhhhhhccceeeeeeEecCcCCchhHhccCCCceEecH
Confidence 99999999998 677764 7789999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEchhhHhhhhhccccCCCCE-EEeecCCCCceeEEEEEcCCCCEEEEEEe
Q psy11632 395 AKDEFYKQPMFYAIGHFSRFIKPGSR-VLKANSRSRTVEVLATIDKDENHVVVVLF 449 (450)
Q Consensus 395 ~~g~~~~~~~yy~~g~fsrfvrPG~~-i~~~~~~~~~v~~~A~~~~dg~~vvVv~n 449 (450)
...+|+++|.||+||||||||+||++ |+.+.+..-.|+.+||.+|||+.|||++|
T Consensus 428 t~~~fYKQPmfya~~hFSkFl~pGs~Rv~~~i~~~~~ve~~aflnpdGskvvVlln 483 (518)
T KOG2566|consen 428 TAQEFYKQPMFYALGHFSKFLPPGSVRVGHSINQNLDVEATAFLNPDGSKVVVLLN 483 (518)
T ss_pred HHHHHhhccHHHHHHHHhhcCCCCceEeeeeeccccccceeEEEcCCCcEEEEEec
Confidence 99999999999999999999999999 99888767789999999999999999988
No 3
>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=8.2e-60 Score=454.04 Aligned_cols=336 Identities=18% Similarity=0.247 Sum_probs=267.9
Q ss_pred eeEEEccCCccceEEEEEE--EecCCCCCChhHHHHHHHHccchhhccccccccccccCCceeeCCCCCCCCCcccCCCC
Q psy11632 44 TLMTADNSKVESYIDGVGI--HWYWDQFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIP 121 (450)
Q Consensus 44 ~~i~v~~~~~~Q~i~GfG~--~~~~~~~~~~~~~~~~~~~lf~~~~~~Te~~~Glg~si~R~~iG~~d~~~~~yt~~~~~ 121 (450)
..|+|+...++|.|+|||+ +-.|...++ ...++.+|. .+.+++||||+|+.|+++||+.+
T Consensus 34 ~~itVn~~~~~Q~IrGFGg~~~~Aw~g~ls----aa~l~t~Fg------ng~~~lg~si~Rv~I~~ndfsl~-------- 95 (433)
T COG5520 34 EDITVNVAAKHQVIRGFGGMNSSAWAGDLS----AAQLETLFG------NGANQLGFSILRVPIDSNDFSLG-------- 95 (433)
T ss_pred ccceechhhhhceeecccccccchhhhhhH----HHHHHHHhc------CCccccCceEEEEEecccccccC--------
Confidence 3688999999999999997 112222333 456677882 12368999999999999998754
Q ss_pred CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCC--CccchHHHHHHHHHHHHHHHHHH
Q psy11632 122 NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGR--GELKTQYYQTWAQYLIMFLDFYK 199 (450)
Q Consensus 122 ~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~--G~L~~~~y~~~A~Yl~~~v~~~~ 199 (450)
++++. |..-+++.|. ++++. +++||||||||+|||++++++|+ |+||.+.|.+||+||.+||++|+
T Consensus 96 g~~d~---------w~kels~Ak~--~in~g-~ivfASPWspPa~Mktt~~~ngg~~g~Lk~e~Ya~yA~~l~~fv~~m~ 163 (433)
T COG5520 96 GSADN---------WYKELSTAKS--AINPG-MIVFASPWSPPASMKTTNNRNGGNAGRLKYEKYADYADYLNDFVLEMK 163 (433)
T ss_pred CCcch---------hhhhcccchh--hcCCC-cEEEecCCCCchhhhhccCcCCccccccchhHhHHHHHHHHHHHHHHH
Confidence 11111 1112223333 45665 99999999999999999999976 79999999999999999999999
Q ss_pred HcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCCChhhhHHhhe
Q psy11632 200 REQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRFVLPWWLEQVC 279 (450)
Q Consensus 200 ~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~~~~~~~~~v~ 279 (450)
++||++++||+|||||+.. +|++|.|+|+|..+|.+++|+|.+. .++|+.||+.++ .+++++.++
T Consensus 164 ~nGvnlyalSVQNEPd~~p---------~~d~~~wtpQe~~rF~~qyl~si~~-----~~rV~~pes~~~-~~~~~dp~l 228 (433)
T COG5520 164 NNGVNLYALSVQNEPDYAP---------TYDWCWWTPQEELRFMRQYLASINA-----EMRVIIPESFKD-LPNMSDPIL 228 (433)
T ss_pred hCCCceeEEeeccCCcccC---------CCCcccccHHHHHHHHHHhhhhhcc-----ccEEecchhccc-ccccccccc
Confidence 9999999999999999973 7899999999999999999999986 389999999886 577766654
Q ss_pred ----------eeEeeecCCCCCChhhhccccCCCchHHHHHHhc--CceeEEeccccCCCCCCCCCCCccccccCCChH-
Q psy11632 280 ----------NIGLRMFQDKLPIPEKILRKDIPSMNVVERKYLF--KLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWS- 346 (450)
Q Consensus 280 ----------~ia~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~- 346 (450)
|+|+|+|+++..+. . ..++++. ||.|||||+..++ +++ ++=.
T Consensus 229 nDp~a~a~~~ilg~H~Ygg~v~~~----p--------~~lak~~~~gKdlwmte~y~~e--------sd~-----~s~dr 283 (433)
T COG5520 229 NDPKALANMDILGTHLYGGQVSDQ----P--------YPLAKQKPAGKDLWMTECYPPE--------SDP-----NSADR 283 (433)
T ss_pred cCHhHhcccceeEeeecccccccc----h--------hhHhhCCCcCCceEEeecccCC--------CCC-----CcchH
Confidence 89999999987442 2 0233333 9999999977552 222 1112
Q ss_pred HHHHHHHHHHHHh-ccCchhhhhhhhhhcCCCCCCCCCCc----cCccEEEeCCCC--EEEEchhhHhhhhhccccCCCC
Q psy11632 347 RAEQYISDIIENL-NHGLVAWLEWNLALNTQGGTNWKNNF----LDAPIIVNAAKD--EFYKQPMFYAIGHFSRFIKPGS 419 (450)
Q Consensus 347 ~~~~~a~~i~~~l-~~~~~a~~~W~~~~~~~gg~~~~~~~----~~~li~~d~~~g--~~~~~~~yy~~g~fsrfvrPG~ 419 (450)
.++.++.+||..+ ++++++++||++.+|+.+||+..++. |.+.+..+..+| .+..++.+|.++|+|||++|+.
T Consensus 284 ~~~~~~~hi~~gm~~gg~~ayv~W~i~~~~~~~~~~gg~~k~~y~ma~fskf~q~gy~rldat~sp~~nvyvsayvg~nk 363 (433)
T COG5520 284 EALHVALHIHIGMTEGGFQAYVWWNIRLDYGGGPNHGGNSKRGYCMAHFSKFVQNGYVRLDATKSPYGNVYVSAYVGPNK 363 (433)
T ss_pred HHHHHHHHHHhhccccCccEEEEEEEeeccCCCcCCCcccccceeEeeeeeeccCCceEEecccCccceEEEEEEecCCc
Confidence 4888999999988 58899999999999999999987654 888888888888 6778999999999999999999
Q ss_pred E-EEeec-CCCCceeEEEEEcCCCCEEEEEEe
Q psy11632 420 R-VLKAN-SRSRTVEVLATIDKDENHVVVVLF 449 (450)
Q Consensus 420 ~-i~~~~-~~~~~v~~~A~~~~dg~~vvVv~n 449 (450)
+ |.+.. +....++.++|+||||+-|.+++|
T Consensus 364 vvivaink~~~~vnq~f~fqNpdgsnVs~w~n 395 (433)
T COG5520 364 VVIVAINKGTYPVNQSFNFQNPDGSNVSSWVN 395 (433)
T ss_pred EEEEeecccccccceeEEEECCCCCeEEEEEe
Confidence 9 66544 234567899999999998988876
No 4
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=100.00 E-value=1.5e-57 Score=452.55 Aligned_cols=327 Identities=17% Similarity=0.134 Sum_probs=200.6
Q ss_pred eeEEEccCCccceEEEEEEEecCC-----CCCChhHHHHHHHHccchhhccccccccccccCCceeeCCCCCCCCCcccC
Q psy11632 44 TLMTADNSKVESYIDGVGIHWYWD-----QFIPVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYD 118 (450)
Q Consensus 44 ~~i~v~~~~~~Q~i~GfG~~~~~~-----~~~~~~~~~~~~~~lf~~~~~~Te~~~Glg~si~R~~iG~~d~~~~~yt~~ 118 (450)
.+|+|++..++|+|+|||++.+|+ ..+++++|++|+|+||++++.....+.||||||+|++||++.......+-.
T Consensus 2 ~~vtId~~~~~QtieGfGaS~aW~a~~~Gk~w~~~~r~~iaDlLFS~~~~~~g~p~GlGLSI~RyNIGgGs~~~~d~~~i 81 (384)
T PF14587_consen 2 KSVTIDPSTTYQTIEGFGASDAWWANFVGKNWPEEKRNQIADLLFSTENDSNGNPKGLGLSIWRYNIGGGSAEQGDSSGI 81 (384)
T ss_dssp EEEEEEEEEEEEE--EEEEE-TTTHHHHHHHS-HHHHHHHHHHHH---B-TTS-B-S---S-EEEE---STTTTTTSS--
T ss_pred ceEEEcCCCCceeeccccHHHhHHHHHhcccCCHHHHHHHHHHhcCCCcccCCCCCCceeeeeeeccccCCcccccCccC
Confidence 368899999999999999999998 357999999999999998887777789999999999999987655322211
Q ss_pred C-----CCC-CccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCC----CccchHHHHHHH
Q psy11632 119 D-----IPN-DKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGR----GELKTQYYQTWA 188 (450)
Q Consensus 119 ~-----~~~-d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~----G~L~~~~y~~~A 188 (450)
. .++ ...-.+|+|++ | .+|+++|++|+++|++ +|++++||||+|||+||+..|+ .+|++++|++||
T Consensus 82 ~~~~rr~e~f~~~dg~yDW~~-D-~gQrwfL~~Ak~rGV~--~f~aFSNSPP~~MT~NG~~~g~~~~~~NLk~d~y~~FA 157 (384)
T PF14587_consen 82 RDPWRRAESFLPADGSYDWDA-D-AGQRWFLKAAKERGVN--IFEAFSNSPPWWMTKNGSASGGDDGSDNLKPDNYDAFA 157 (384)
T ss_dssp SSSTT----SB-TTS-B-TTS-S-HHHHHHHHHHHHTT-----EEEE-SSS-GGGSSSSSSB-S-SSS-SS-TT-HHHHH
T ss_pred CCcccCCccccCCCCCcCCCC-C-HHHHHHHHHHHHcCCC--eEEEeecCCCHHHhcCCCCCCCCccccccChhHHHHHH
Confidence 0 110 01126788887 3 6899999999999988 6889999999999999998754 379999999999
Q ss_pred HHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCC
Q psy11632 189 QYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQR 268 (450)
Q Consensus 189 ~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~ 268 (450)
+||+++|++|+++||+|++|||+|||+++| .. +.||||+|+++|+++||+ .|+++|+++||+ ++|+++|...
T Consensus 158 ~YLa~Vv~~~~~~GI~f~~IsP~NEP~~~W-~~-----~~QEG~~~~~~e~a~vI~-~L~~~L~~~GL~-t~I~~~Ea~~ 229 (384)
T PF14587_consen 158 DYLADVVKHYKKWGINFDYISPFNEPQWNW-AG-----GSQEGCHFTNEEQADVIR-ALDKALKKRGLS-TKISACEAGD 229 (384)
T ss_dssp HHHHHHHHHHHCTT--EEEEE--S-TTS-G-G-------SS-B----HHHHHHHHH-HHHHHHHHHT-S--EEEEEEESS
T ss_pred HHHHHHHHHHHhcCCccceeCCcCCCCCCC-CC-----CCcCCCCCCHHHHHHHHH-HHHHHHHhcCCC-ceEEecchhh
Confidence 999999999988999999999999999885 22 479999999999999999 899999999997 9999999865
Q ss_pred CCh--------hhhHHhh-------------------eeeEeeecCCCCCChhhhccccCCCchHHHHHHhc--CceeEE
Q psy11632 269 FVL--------PWWLEQV-------------------CNIGLRMFQDKLPIPEKILRKDIPSMNVVERKYLF--KLYILV 319 (450)
Q Consensus 269 ~~~--------~~~~~~v-------------------~~ia~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~k~~w~ 319 (450)
... +....+| ..|+.|+|+++... +.|. + .+.++.+..+++ +.++||
T Consensus 230 ~~~l~~~~~~~~~r~~~i~~ff~~~s~~yi~~l~~v~~~i~~HsYwt~~~~--~~l~-~-~R~~~~~~~~~~~~~~~~wq 305 (384)
T PF14587_consen 230 WEYLYKTDKNDWGRGNQIEAFFNPDSSTYIGDLPNVPNIISGHSYWTDSPW--DDLR-D-IRKQLADKLDKYSPGLKYWQ 305 (384)
T ss_dssp GGGGS---S-TTS---HHHHHHSTTSTT--TT-TTEEEEEEE--TT-SSSH--HHHH-H-HHHHHHHHHHTTSS--EEEE
T ss_pred HHHHhhccCCchhhhhhHHhhcCCCchhhhhccccchhheeecccccCCCH--HHHH-H-HHHHHHHHHHhhCcCCceee
Confidence 311 1111111 16999999987633 3343 0 113455666677 899999
Q ss_pred eccccCCCCCCCCCCCccccc-cCCChHHHHHHHHHHHHHhc-cCchhhhhhhhhhcCCCCCCCCCCccCccEEEeCCCC
Q psy11632 320 YTAFAGIKGLFSDKPWDLIKV-QLGSWSRAEQYISDIIENLN-HGLVAWLEWNLALNTQGGTNWKNNFLDAPIIVNAAKD 397 (450)
Q Consensus 320 TE~~~~~~g~~~~~~~~~~~~-~~~~w~~~~~~a~~i~~~l~-~~~~a~~~W~~~~~~~gg~~~~~~~~~~li~~d~~~g 397 (450)
||+|..+.+ .......+. .+..|+.||.+||.||+||. +++++|.||..+.. + ++.+|||.+|...+
T Consensus 306 tE~~il~~~---~~~~~~~g~~~~~~m~~aLy~arviH~DL~~anassW~wW~a~~~------~--~ykdgli~i~~~~~ 374 (384)
T PF14587_consen 306 TEYCILGDN---YEIIEGGGYDRDLGMDTALYVARVIHNDLTYANASSWQWWTAISP------Y--DYKDGLIYIDKNKG 374 (384)
T ss_dssp ----S-------TTT-SSS-HHHHHHH--HHHHHHHHHHHHHTS--SEEEEEESEES------S----SSSSEEEE-STT
T ss_pred eeeeeccCC---cccccCCCcccchhHHHHHHHHHHHHhhhhhcccchhHHHHHhcc------c--cccCceEEEcCCCC
Confidence 999998532 111111121 24469999999999999995 89999999998732 1 56789999997643
No 5
>PF02057 Glyco_hydro_59: Glycosyl hydrolase family 59; InterPro: IPR001286 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 59 GH59 from CAZY comprises enzymes with only one known activity; galactocerebrosidase (3.2.1.46 from EC). Globoid cell leukodystrophy (Krabbe disease) is a severe, autosomal recessive disorder that results from deficiency of galactocerebrosidase (GALC) activity [, , ]. GALC is responsible for the lysosomal catabolism of certain galactolipids, including galactosylceramide and psychosine [].; GO: 0004336 galactosylceramidase activity, 0006683 galactosylceramide catabolic process; PDB: 3ZR6_A 3ZR5_A.
Probab=99.97 E-value=1.1e-29 Score=267.07 Aligned_cols=321 Identities=19% Similarity=0.215 Sum_probs=187.3
Q ss_pred eEEEccC-CccceEEEEEEEecCC---CC---CChhHHHHHHHHccchhhcccccc-ccccccCCceeeCCCCCCCC--C
Q psy11632 45 LMTADNS-KVESYIDGVGIHWYWD---QF---IPVTVVDTVHKKYPRLLLINTEAS-IGISYAFGRVPIGGCDFSTR--A 114 (450)
Q Consensus 45 ~i~v~~~-~~~Q~i~GfG~~~~~~---~~---~~~~~~~~~~~~lf~~~~~~Te~~-~Glg~si~R~~iG~~d~~~~--~ 114 (450)
.+++++. ..-++++|||+--.++ .. ++++.|.+|++.|| .+ .|+.|.||.++||+...+.. +
T Consensus 26 ~~~~~d~~~~G~tFdG~G~vSggg~tSrLL~dY~e~~r~qILd~LF--------kp~~Gasl~~lKvEiGgD~nst~GtE 97 (669)
T PF02057_consen 26 SYVLDDGGGLGRTFDGIGAVSGGGATSRLLMDYPEPQRSQILDYLF--------KPNFGASLQILKVEIGGDANSTSGTE 97 (669)
T ss_dssp EEEE--TT-EEEE--EEEEEE-SS-TTTTTTT--TTHHHHHHHHHH--------STTTSS--SEEEEEE--SSB-SSSB-
T ss_pred cEEEecCCCCCceecceeeeccCCccchhhccCCchhHHHHHHHHh--------CCCCCceeeEEEEEecCCCCCCCCCC
Confidence 3445554 5678999999955543 22 26778999999999 66 59999999999997544332 3
Q ss_pred cccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccch-HHHHHHHHHHHH
Q psy11632 115 YTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKT-QYYQTWAQYLIM 193 (450)
Q Consensus 115 yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~-~~y~~~A~Yl~~ 193 (450)
-++...++| .++. ..+-.+++++||++||+ +|+.+-||+.|.|... |+-.+ ++.+..|.|+++
T Consensus 98 Pshm~~~~d---~n~~-----RGye~~L~~eAKkrNP~-ikl~~L~W~~PgW~~~-------g~~~~~~~~~~~a~Y~~~ 161 (669)
T PF02057_consen 98 PSHMHSEDD---ENYF-----RGYEWWLMAEAKKRNPN-IKLYGLPWGFPGWVGN-------GWNWPYDNPQLTAYYVVS 161 (669)
T ss_dssp --S-SSTT------S------SSSHHHHHHHHHHH-TT--EEEEEES-B-GGGGT-------TSS-TTSSHHHHHHHHHH
T ss_pred Ccccccccc---cccc-----cChhhhhHHHHHhhCCC-CeEEEeccCCCccccC-------CCCCcccchhhhhHHHHH
Confidence 444444333 2333 34678999999999999 9999999999999952 33232 456677889999
Q ss_pred HHHHHH-HcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCCCh-
Q psy11632 194 FLDFYK-REQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRFVL- 271 (450)
Q Consensus 194 ~v~~~~-~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~~~- 271 (450)
++...+ .+|+.|++|.++||-.++ .++|| .|+.+|++.|++++||++.|..+..+
T Consensus 162 wl~ga~~~~gl~idYvg~~NEr~~~----------------------~~~ik-~lr~~l~~~gy~~vkiva~D~~~~~~~ 218 (669)
T PF02057_consen 162 WLLGAKKTHGLDIDYVGIWNERGFD----------------------VNYIK-WLRKALNSNGYNKVKIVAADNNWESIS 218 (669)
T ss_dssp HHHHHHHHH-----EE-S-TTS-------------------------HHHHH-HHHHHHHHTT-TT-EEEEEEE-STTHH
T ss_pred HHHHHHHHhCCCceEechhhccCCC----------------------hhHHH-HHHHHHhhccccceEEEEeCCCccchh
Confidence 997655 589999999999998764 47888 79999999999999999999876533
Q ss_pred ------hhhHHhheeeEeeecCCCCCChhhhccccCCCchHHHHHHhcCceeEEeccccCCCCCCCCCCCccccccCCCh
Q psy11632 272 ------PWWLEQVCNIGLRMFQDKLPIPEKILRKDIPSMNVVERKYLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSW 345 (450)
Q Consensus 272 ------~~~~~~v~~ia~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w 345 (450)
++..++|.+|+.|. -+..+. .-++..+|+||.||-+... +. +
T Consensus 219 ~~m~~D~~l~~avdvig~HY-~~~~~~---------------~~a~~~~K~lW~SE~~s~~---------~~------~- 266 (669)
T PF02057_consen 219 DDMLSDPELRNAVDVIGYHY-PGTYSS---------------KNAKLTGKPLWSSEDYSTF---------NY------N- 266 (669)
T ss_dssp HHHHH-HHHHHH--EEEEES--TT------------------HHHHHHT-EEEEEEEE-S----------TT------H-
T ss_pred hhhhcCHHHHhcccEecccc-CCCCcH---------------HHHHHhCCCeEEcCCcccc---------cC------c-
Confidence 34566777999994 432211 2233459999999965431 10 0
Q ss_pred HHHHHHHHHHHH-HhccCchhhhhhhhhhcCCCCCCCCCCccCccEEEe-CCCCEEEEchhhHhhhhhccccCCCCE-EE
Q psy11632 346 SRAEQYISDIIE-NLNHGLVAWLEWNLALNTQGGTNWKNNFLDAPIIVN-AAKDEFYKQPMFYAIGHFSRFIKPGSR-VL 422 (450)
Q Consensus 346 ~~~~~~a~~i~~-~l~~~~~a~~~W~~~~~~~gg~~~~~~~~~~li~~d-~~~g~~~~~~~yy~~g~fsrfvrPG~~-i~ 422 (450)
..+--+||.|.. .++..++++|.|+++.-...+-.|. +.+||..+ +-+|.|.+.+-.|+++||+.|.+||++ ++
T Consensus 267 ~g~g~~ar~ln~~yv~g~mT~~I~w~lVasyYp~lpy~---~~gL~~A~ePWSG~Y~v~~~iWv~AHtTQFt~pGW~YL~ 343 (669)
T PF02057_consen 267 VGAGCWARILNRNYVNGRMTAYINWPLVASYYPGLPYS---RKGLMTANEPWSGHYEVDSPIWVTAHTTQFTQPGWRYLD 343 (669)
T ss_dssp HHHHHHHHHHHHHHHHH--SEEEEE-SEE-S-TTSTTT---T-SSCE---TTT---B--HHHHHHHHHHTT--TT-EEES
T ss_pred CchHHHHHHHHhhhhccceEEEEeehhhhhhcCCCCCC---CccceEecCCcccceEecceeeeeeehhccCCCCeEEcc
Confidence 122335565544 4577899999999986543333342 33788775 568999999999999999999999999 98
Q ss_pred eecCCCCceeEEEEEcCCCCEEEEE
Q psy11632 423 KANSRSRTVEVLATIDKDENHVVVV 447 (450)
Q Consensus 423 ~~~~~~~~v~~~A~~~~dg~~vvVv 447 (450)
.......+...++.+++.|++++|+
T Consensus 344 ~~G~l~~gGSYVtLtd~~gn~tiii 368 (669)
T PF02057_consen 344 SVGHLRGGGSYVTLTDGTGNYTIII 368 (669)
T ss_dssp --EE-TTS-EEEEEE-SSS-EEEEE
T ss_pred CccccCCCcceEEeecCCCCceEEE
Confidence 7665677788999999989888776
No 6
>KOG2566|consensus
Probab=99.50 E-value=5.3e-15 Score=145.30 Aligned_cols=191 Identities=20% Similarity=0.365 Sum_probs=129.9
Q ss_pred CCCChhHHHHHhhhccCcEEEEecC--CCceEEeccCCCCCCCcceeEEEccCCccceEEEEEEEecCCCCCChhHHHHH
Q psy11632 1 MGWSPFALAKRVGDSLGPTIKTSNL--ATKIFMLDDQKVPLPWFITLMTADNSKVESYIDGVGIHWYWDQFIPVTVVDTV 78 (450)
Q Consensus 1 ~~~t~~~~~~fi~~~lgp~l~~~~~--~~~~~~~d~~~~~~~~~~~~i~v~~~~~~Q~i~GfG~~~~~~~~~~~~~~~~~ 78 (450)
|+||+|.||+||+..|||+|..+.. +.++|+.|+||...|.|+.+| ++++++.||+.|+++|||.+..=+...+++.
T Consensus 271 l~ftae~qRdFik~dLGPaLa~s~~~knvkllilDD~Rg~LP~Wadtv-lnDpeAakYv~GIaVHwY~df~~pa~~L~eT 349 (518)
T KOG2566|consen 271 LGFTAETQRDFIKKDLGPALASSKTTKNVKLLILDDQRGLLPHWADTV-LNDPEAAKYVHGIAVHWYQDFLEPAKHLDET 349 (518)
T ss_pred cccCHHHHHHHHHHhcchhhhcCCcCCceEEEEecCCccCCCccchhh-ccChhhhhhccceEEEeeccccChhhhhhhH
Confidence 6899999999999999999998844 448999999998899886554 8999999999999999998844466788999
Q ss_pred HHHccchhhccccccccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEE
Q psy11632 79 HKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVG 158 (450)
Q Consensus 79 ~~~lf~~~~~~Te~~~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~ 158 (450)
|+.+|++++++||+|.|-+.--. +.+|++ .+...|..|... +|+++.-+|.||+.++. ++ .||+
T Consensus 350 h~~hP~~fifgTEAc~Gy~~~d~-v~~Gsw-drae~yasdii~---dlnn~vtGWtdwNl~Ld----~~-GGP~------ 413 (518)
T KOG2566|consen 350 HRKHPNTFIFGTEACAGYKSKDG-VDLGSW-DRAEQYASDIIT---DLNNHVTGWTDWNLILD----AQ-GGPN------ 413 (518)
T ss_pred HhhCCCeEEEeehhccccccccC-ccccch-hhHHHHHHHHHH---hhhhhccceeeeeeEec----Cc-CCch------
Confidence 99999999999999988654332 555654 344456665432 36777777777664322 11 2222
Q ss_pred eecCCCcccccC---CCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 159 SAWSAPAWMKTN---NALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 159 s~WSpP~wMk~n---~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
|-+.= .-.. ---..++|..--=|...+..+|-+.|.-.-.+++-=+++-+
T Consensus 414 -------wv~nfvDspiIv--~~t~~~fYKQPmfya~~hFSkFl~pGs~Rv~~~i~~~~~ve 466 (518)
T KOG2566|consen 414 -------WVSNFVDSPIIV--NPTAQEFYKQPMFYALGHFSKFLPPGSVRVGHSINQNLDVE 466 (518)
T ss_pred -------hHhccCCCceEe--cHHHHHHhhccHHHHHHHHhhcCCCCceEeeeeeccccccc
Confidence 33110 0000 01123677665556667777777776633333333355543
No 7
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=99.36 E-value=4.8e-14 Score=148.41 Aligned_cols=95 Identities=32% Similarity=0.650 Sum_probs=79.5
Q ss_pred CCCChhHHHHHhhhccCcEEEEecC--CCceEEeccCCCCCCCcceeEEEccCCccceEEEEEEEecCCCCCChhHHHHH
Q psy11632 1 MGWSPFALAKRVGDSLGPTIKTSNL--ATKIFMLDDQKVPLPWFITLMTADNSKVESYIDGVGIHWYWDQFIPVTVVDTV 78 (450)
Q Consensus 1 ~~~t~~~~~~fi~~~lgp~l~~~~~--~~~~~~~d~~~~~~~~~~~~i~v~~~~~~Q~i~GfG~~~~~~~~~~~~~~~~~ 78 (450)
|.|||++||+||++||||+|+++++ +.+|+++|||+...+.+..+| ++++++.++|+|+|+|||++.. ++..++++
T Consensus 246 ~~~t~~~~~~Fi~~~LgP~l~~~~~g~d~kI~~~D~n~~~~~~~~~~i-l~d~~A~~yv~GiA~HwY~g~~-~~~~l~~~ 323 (496)
T PF02055_consen 246 MGWTPEEQADFIKNYLGPALRKAGLGKDVKILIYDHNRDNLPDYADTI-LNDPEAAKYVDGIAFHWYGGDP-SPQALDQV 323 (496)
T ss_dssp -B--HHHHHHHHHHTHHHHHHTSTT-TTSEEEEEEEEGGGTTHHHHHH-HTSHHHHTTEEEEEEEETTCS--HCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCCcccchhhhhh-hcChhhHhheeEEEEECCCCCc-hhhHHHHH
Confidence 8999999999999999999999988 779999999997677666555 7888999999999999999832 23577899
Q ss_pred HHHccchhhcccccccccc
Q psy11632 79 HKKYPRLLLINTEASIGIS 97 (450)
Q Consensus 79 ~~~lf~~~~~~Te~~~Glg 97 (450)
|+.+|+|++++||+|.|-+
T Consensus 324 h~~~P~k~l~~TE~~~g~~ 342 (496)
T PF02055_consen 324 HNKFPDKFLLFTEACCGSW 342 (496)
T ss_dssp HHHSTTSEEEEEEEESS-S
T ss_pred HHHCCCcEEEeeccccCCC
Confidence 9999999999999998753
No 8
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=98.73 E-value=3.4e-07 Score=89.32 Aligned_cols=232 Identities=11% Similarity=0.128 Sum_probs=128.8
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNAL 173 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~ 173 (450)
..+|++.+|++|+-..+- .. ...+..+..-...+..+|++|+++ +++++.....+|.|-...+..
T Consensus 31 ~~~G~n~VRi~v~~~~~~------~~------~~~~~~~~~~~~~ld~~v~~a~~~---gi~vild~h~~~~w~~~~~~~ 95 (281)
T PF00150_consen 31 KALGFNTVRIPVGWEAYQ------EP------NPGYNYDETYLARLDRIVDAAQAY---GIYVILDLHNAPGWANGGDGY 95 (281)
T ss_dssp HHTTESEEEEEEESTSTS------TT------STTTSBTHHHHHHHHHHHHHHHHT---T-EEEEEEEESTTCSSSTSTT
T ss_pred HHCCCCEEEeCCCHHHhc------CC------CCCccccHHHHHHHHHHHHHHHhC---CCeEEEEeccCcccccccccc
Confidence 459999999999831111 00 011222222234556778888887 478889999999883222111
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhc
Q psy11632 174 TGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRS 253 (450)
Q Consensus 174 ~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~ 253 (450)
. -....-+.|+.++..+++.|+...- +.++.+.|||.....+ ..| ..-+++...+++. .+..++++
T Consensus 96 ~----~~~~~~~~~~~~~~~la~~y~~~~~-v~~~el~NEP~~~~~~------~~w--~~~~~~~~~~~~~-~~~~~Ir~ 161 (281)
T PF00150_consen 96 G----NNDTAQAWFKSFWRALAKRYKDNPP-VVGWELWNEPNGGNDD------ANW--NAQNPADWQDWYQ-RAIDAIRA 161 (281)
T ss_dssp T----THHHHHHHHHHHHHHHHHHHTTTTT-TEEEESSSSGCSTTST------TTT--SHHHTHHHHHHHH-HHHHHHHH
T ss_pred c----cchhhHHHHHhhhhhhccccCCCCc-EEEEEecCCccccCCc------ccc--ccccchhhhhHHH-HHHHHHHh
Confidence 1 1112344566677778888875433 6689999999975210 012 2335677888887 68999999
Q ss_pred CCCCCeEEEEecCCCCChh-----hhH---HhheeeEeeecCCCCCChhhh----ccccCCCchHHHHH---HhcCceeE
Q psy11632 254 SQHNATKILAIDDQRFVLP-----WWL---EQVCNIGLRMFQDKLPIPEKI----LRKDIPSMNVVERK---YLFKLYIL 318 (450)
Q Consensus 254 ~gl~~~kI~~~d~~~~~~~-----~~~---~~v~~ia~H~Y~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~k~~w 318 (450)
.+.+ ..|++....+.... ..+ ...+++++|.|.......... .........+.... .+.|+++|
T Consensus 162 ~~~~-~~i~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~pv~ 240 (281)
T PF00150_consen 162 ADPN-HLIIVGGGGWGADPDGAAADNPNDADNNDVYSFHFYDPYDFSDQWNPGNWGDASALESSFRAALNWAKKNGKPVV 240 (281)
T ss_dssp TTSS-SEEEEEEHHHHTBHHHHHHHSTTTTTTSEEEEEEEETTTCHHTTTSTCSHHHHHHHHHHHHHHHHHHHHTTSEEE
T ss_pred cCCc-ceeecCCCccccccchhhhcCcccccCceeEEeeEeCCCCcCCccccccchhhhHHHHHHHHHHHHHHHcCCeEE
Confidence 9886 67777653221111 112 123479999999543100000 00000001111222 22289999
Q ss_pred EeccccCCCCCCCCCCCccccccCCChHHHHHHHHHHHHHhccCchhhhhhhh
Q psy11632 319 VYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWNL 371 (450)
Q Consensus 319 ~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i~~~l~~~~~a~~~W~~ 371 (450)
++|++.. ... +. ........++..++...-+|++|..
T Consensus 241 ~gE~G~~------~~~--------~~--~~~~~~~~~~~~~~~~~~g~~~W~~ 277 (281)
T PF00150_consen 241 VGEFGWS------NND--------GN--GSTDYADAWLDYLEQNGIGWIYWSW 277 (281)
T ss_dssp EEEEESS------TTT--------SC--HHHHHHHHHHHHHHHTTCEEEECEE
T ss_pred EeCcCCc------CCC--------CC--cCHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999764 110 11 1223444446666655678999985
No 9
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=98.35 E-value=3.4e-06 Score=81.44 Aligned_cols=132 Identities=14% Similarity=0.033 Sum_probs=84.1
Q ss_pred CCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCCC-----hhhhHH
Q psy11632 202 QLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRFV-----LPWWLE 276 (450)
Q Consensus 202 Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~~-----~~~~~~ 276 (450)
.-.+.+|-.+||||.. .++.++|++.++..++++ ..|+.. .+||..|--.... -..|.+
T Consensus 63 ~~~~~~ll~fNEPD~~------------~qsn~~p~~aa~~w~~~~-~~~~~~---~~~l~sPa~~~~~~~~~~g~~Wl~ 126 (239)
T PF11790_consen 63 HPGSKHLLGFNEPDLP------------GQSNMSPEEAAALWKQYM-NPLRSP---GVKLGSPAVAFTNGGTPGGLDWLS 126 (239)
T ss_pred ccCccceeeecCCCCC------------CCCCCCHHHHHHHHHHHH-hHhhcC---CcEEECCeecccCCCCCCccHHHH
Confidence 4456779999999985 267889999999988544 455542 4788887763221 122433
Q ss_pred h----------heeeEeeecCCCCCChhhhccccCCCchHHHHHHhcCceeEEeccccCCCCCCCCCCCccccccCCChH
Q psy11632 277 Q----------VCNIGLRMFQDKLPIPEKILRKDIPSMNVVERKYLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWS 346 (450)
Q Consensus 277 ~----------v~~ia~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~ 346 (450)
. ++.+++|+|.++. ..+. ..|..+++.|+|+||+||+++.. ... ..+-+
T Consensus 127 ~F~~~~~~~~~~D~iavH~Y~~~~----~~~~-----~~i~~~~~~~~kPIWITEf~~~~------~~~------~~~~~ 185 (239)
T PF11790_consen 127 QFLSACARGCRVDFIAVHWYGGDA----DDFK-----DYIDDLHNRYGKPIWITEFGCWN------GGS------QGSDE 185 (239)
T ss_pred HHHHhcccCCCccEEEEecCCcCH----HHHH-----HHHHHHHHHhCCCEEEEeecccC------CCC------CCCHH
Confidence 2 3379999995442 2233 24448888889999999997641 000 12223
Q ss_pred HHHHHHHHHHHHhc--cCchhhhhhh
Q psy11632 347 RAEQYISDIIENLN--HGLVAWLEWN 370 (450)
Q Consensus 347 ~~~~~a~~i~~~l~--~~~~a~~~W~ 370 (450)
....+.+.++..|. ..+..|.|..
T Consensus 186 ~~~~fl~~~~~~ld~~~~VeryawF~ 211 (239)
T PF11790_consen 186 QQASFLRQALPWLDSQPYVERYAWFG 211 (239)
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEecc
Confidence 44566677777774 4566666665
No 10
>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane]
Probab=98.26 E-value=5.3e-07 Score=88.86 Aligned_cols=82 Identities=20% Similarity=0.167 Sum_probs=63.2
Q ss_pred CCCChhHHHHHhhhccCcEEEEecCCCceEEeccCCCCCCCcceeEEEccCCccceEEEEEEEecCCCCCChhHHHHHHH
Q psy11632 1 MGWSPFALAKRVGDSLGPTIKTSNLATKIFMLDDQKVPLPWFITLMTADNSKVESYIDGVGIHWYWDQFIPVTVVDTVHK 80 (450)
Q Consensus 1 ~~~t~~~~~~fi~~~lgp~l~~~~~~~~~~~~d~~~~~~~~~~~~i~v~~~~~~Q~i~GfG~~~~~~~~~~~~~~~~~~~ 80 (450)
|-|||+|+.+|.++||+|.+. ..++++.++.++ .|.....| ++|+++++.|+|.|+|||++... .+...+-
T Consensus 187 ~~wtpQe~~rF~~qyl~si~~----~~rV~~pes~~~-~~~~~dp~-lnDp~a~a~~~ilg~H~Ygg~v~---~~p~~la 257 (433)
T COG5520 187 CWWTPQEELRFMRQYLASINA----EMRVIIPESFKD-LPNMSDPI-LNDPKALANMDILGTHLYGGQVS---DQPYPLA 257 (433)
T ss_pred ccccHHHHHHHHHHhhhhhcc----ccEEecchhccc-cccccccc-ccCHhHhcccceeEeeecccccc---cchhhHh
Confidence 889999999999999999976 557889999997 55544445 89999999999999999998332 2223333
Q ss_pred Hcc--chhhcccc
Q psy11632 81 KYP--RLLLINTE 91 (450)
Q Consensus 81 ~lf--~~~~~~Te 91 (450)
+.+ +|++++||
T Consensus 258 k~~~~gKdlwmte 270 (433)
T COG5520 258 KQKPAGKDLWMTE 270 (433)
T ss_pred hCCCcCCceEEee
Confidence 333 57777886
No 11
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=98.21 E-value=8.6e-05 Score=74.73 Aligned_cols=214 Identities=14% Similarity=0.107 Sum_probs=112.3
Q ss_pred ccccHHHHHHHHHhcCCCeEEEEe-----ecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeecc
Q psy11632 136 FQYKIPLIQQANRLRGEPLRLVGS-----AWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTT 210 (450)
Q Consensus 136 ~~~~~~~lk~A~~~~~~~~~i~~s-----~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~ 210 (450)
....+.++|+||+.| ++|+.. .|.=|.-=+......+ .=..+.-++-.+|-.+.+++++++|+.++.|.+
T Consensus 57 ~~~~~~~akrak~~G---m~vlldfHYSD~WaDPg~Q~~P~aW~~--~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQV 131 (332)
T PF07745_consen 57 LEDVIALAKRAKAAG---MKVLLDFHYSDFWADPGKQNKPAAWAN--LSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQV 131 (332)
T ss_dssp HHHHHHHHHHHHHTT----EEEEEE-SSSS--BTTB-B--TTCTS--SSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEE
T ss_pred HHHHHHHHHHHHHCC---CeEEEeecccCCCCCCCCCCCCccCCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEe
Confidence 345788999999885 666543 2433332222222221 111245556669999999999999999999999
Q ss_pred CCcCCCCCCCCCCCCCCCCC-CCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCCCh---hhhHHhh-------e
Q psy11632 211 GNEPINGDLPSFLPFVPKFN-SMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRFVL---PWWLEQV-------C 279 (450)
Q Consensus 211 qNEP~~~~~~~~~~~~~~~~-~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~~~---~~~~~~v-------~ 279 (450)
-||=.... =|| +-.=..++++.+++ .-..+.++.+.+ +||++.=++-.+. ..|.+.+ .
T Consensus 132 GNEin~Gm---------lwp~g~~~~~~~~a~ll~-ag~~AVr~~~p~-~kV~lH~~~~~~~~~~~~~f~~l~~~g~d~D 200 (332)
T PF07745_consen 132 GNEINNGM---------LWPDGKPSNWDNLAKLLN-AGIKAVREVDPN-IKVMLHLANGGDNDLYRWFFDNLKAAGVDFD 200 (332)
T ss_dssp SSSGGGES---------TBTTTCTT-HHHHHHHHH-HHHHHHHTHSST-SEEEEEES-TTSHHHHHHHHHHHHHTTGG-S
T ss_pred Cccccccc---------cCcCCCccCHHHHHHHHH-HHHHHHHhcCCC-CcEEEEECCCCchHHHHHHHHHHHhcCCCcc
Confidence 99976532 011 11224567777776 445666665554 8999874333222 2233332 2
Q ss_pred eeEeeecCCCCCChhhhccccCCCchHHHHHHhcCceeEEeccccCCC----CCCCCCCCcc----ccccCCChHHHHHH
Q psy11632 280 NIGLRMFQDKLPIPEKILRKDIPSMNVVERKYLFKLYILVYTAFAGIK----GLFSDKPWDL----IKVQLGSWSRAEQY 351 (450)
Q Consensus 280 ~ia~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~w~TE~~~~~~----g~~~~~~~~~----~~~~~~~w~~~~~~ 351 (450)
.|+++.|-...... ..+. ..+..+.++|+|+++++|.+.... +..+ ..... .++ --+-..-..+
T Consensus 201 viGlSyYP~w~~~l-~~l~-----~~l~~l~~ry~K~V~V~Et~yp~t~~d~D~~~-n~~~~~~~~~~y-p~t~~GQ~~~ 272 (332)
T PF07745_consen 201 VIGLSYYPFWHGTL-EDLK-----NNLNDLASRYGKPVMVVETGYPWTLDDGDGTG-NIIGATSLISGY-PATPQGQADF 272 (332)
T ss_dssp EEEEEE-STTST-H-HHHH-----HHHHHHHHHHT-EEEEEEE---SBS--SSSS---SSSSSTGGTTS--SSHHHHHHH
T ss_pred eEEEecCCCCcchH-HHHH-----HHHHHHHHHhCCeeEEEecccccccccccccc-ccCccccccCCC-CCCHHHHHHH
Confidence 67777776543222 3333 244477888899999999863310 0000 00000 000 0122334456
Q ss_pred HHHHHHHhc----cCchhhhhhhhhh
Q psy11632 352 ISDIIENLN----HGLVAWLEWNLAL 373 (450)
Q Consensus 352 a~~i~~~l~----~~~~a~~~W~~~~ 373 (450)
.+.|+..++ ....+.+||....
T Consensus 273 l~~l~~~v~~~p~~~g~GvfYWeP~w 298 (332)
T PF07745_consen 273 LRDLINAVKNVPNGGGLGVFYWEPAW 298 (332)
T ss_dssp HHHHHHHHHTS--TTEEEEEEE-TT-
T ss_pred HHHHHHHHHHhccCCeEEEEeecccc
Confidence 666666663 3688999997654
No 12
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=97.69 E-value=0.00095 Score=64.97 Aligned_cols=115 Identities=17% Similarity=0.269 Sum_probs=69.7
Q ss_pred CCCCCccccccccHHHHHHHHHhcCCCeEEEEeec--CCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCc
Q psy11632 127 EKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAW--SAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLS 204 (450)
Q Consensus 127 ~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~W--SpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~ 204 (450)
+.|+++..| .+++.|++.|.. ++.....| ..|.|+...+ ..+..+.+.+|+.+++++|+..
T Consensus 11 G~~n~~~~D-----~~~~~a~~~gi~-v~gH~l~W~~~~P~W~~~~~--------~~~~~~~~~~~i~~v~~ry~g~--- 73 (254)
T smart00633 11 GQFNFSGAD-----AIVNFAKENGIK-VRGHTLVWHSQTPDWVFNLS--------KETLLARLENHIKTVVGRYKGK--- 73 (254)
T ss_pred CccChHHHH-----HHHHHHHHCCCE-EEEEEEeecccCCHhhhcCC--------HHHHHHHHHHHHHHHHHHhCCc---
Confidence 456665433 477888887654 44444567 5689996321 3467888888888888888744
Q ss_pred eeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCC
Q psy11632 205 FWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQ 267 (450)
Q Consensus 205 i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~ 267 (450)
|..+.+.|||.....+ .+-.+.|...-=.++++... ..-++... ++||+..|-+
T Consensus 74 i~~wdV~NE~~~~~~~-------~~~~~~w~~~~G~~~i~~af-~~ar~~~P-~a~l~~Ndy~ 127 (254)
T smart00633 74 IYAWDVVNEALHDNGS-------GLRRSVWYQILGEDYIEKAF-RYAREADP-DAKLFYNDYN 127 (254)
T ss_pred ceEEEEeeecccCCCc-------ccccchHHHhcChHHHHHHH-HHHHHhCC-CCEEEEeccC
Confidence 7778999999865210 11122332111024555333 34455555 4999998744
No 13
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A.
Probab=97.40 E-value=0.0053 Score=65.43 Aligned_cols=230 Identities=16% Similarity=0.213 Sum_probs=116.8
Q ss_pred hHHHHHHHHHHHHHHHHHHH-cC---CceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCC
Q psy11632 181 TQYYQTWAQYLIMFLDFYKR-EQ---LSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQH 256 (450)
Q Consensus 181 ~~~y~~~A~Yl~~~v~~~~~-~G---i~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl 256 (450)
|..|+.|.+++..+++|+.+ .| |.-+...+.|||+... -|. .-+.+|.-++.+ +...++++...
T Consensus 128 p~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiWNEPd~~~---------f~~--~~~~~ey~~ly~-~~~~~iK~~~p 195 (486)
T PF01229_consen 128 PKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIWNEPDLKD---------FWW--DGTPEEYFELYD-ATARAIKAVDP 195 (486)
T ss_dssp BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEESS-TTSTT---------TSG--GG-HHHHHHHHH-HHHHHHHHH-T
T ss_pred cccHHHHHHHHHHHHHHHHhhcCCccccceeEEeCcCCCccc---------ccC--CCCHHHHHHHHH-HHHHHHHHhCC
Confidence 47899999999999999974 45 4668899999999752 111 124567777766 67888888876
Q ss_pred CCeEEEEecCCCCChhhhHH-----------hheeeEeeecCCCCCCh-hhhccccCCCc-----hHHHHHHh-----c-
Q psy11632 257 NATKILAIDDQRFVLPWWLE-----------QVCNIGLRMFQDKLPIP-EKILRKDIPSM-----NVVERKYL-----F- 313 (450)
Q Consensus 257 ~~~kI~~~d~~~~~~~~~~~-----------~v~~ia~H~Y~~~~~~~-~~~~~~~~~~~-----~~~~~~~~-----~- 313 (450)
. .||-+|--.. ....|.. .+..|++|.|..+.... .......+... .+..+.+. +
T Consensus 196 ~-~~vGGp~~~~-~~~~~~~~~l~~~~~~~~~~DfiS~H~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 273 (486)
T PF01229_consen 196 E-LKVGGPAFAW-AYDEWCEDFLEFCKGNNCPLDFISFHSYGTDSAEDINENMYERIEDSRRLFPELKETRPIINDEADP 273 (486)
T ss_dssp T-SEEEEEEEET-T-THHHHHHHHHHHHCT---SEEEEEEE-BESESE-SS-EEEEB--HHHHHHHHHHHHHHHHTSSST
T ss_pred C-CcccCccccc-cHHHHHHHHHHHHhcCCCCCCEEEEEecccccccccchhHHhhhhhHHHHHHHHHHHHHHHhhccCC
Confidence 4 8988872211 1122221 23479999998653110 00011011100 11122111 2
Q ss_pred CceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHHHHHhccCchhhhhhhhhh-cCCCCCC---CCCCccCcc
Q psy11632 314 KLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWNLAL-NTQGGTN---WKNNFLDAP 389 (450)
Q Consensus 314 ~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i~~~l~~~~~a~~~W~~~~-~~~gg~~---~~~~~~~~l 389 (450)
++++..||+... ..+.+ ...++.. .|-.+++.++...+..+.++-||.+-. -+..++. ..|. .||
T Consensus 274 ~~~~~~tE~n~~------~~~~~--~~~dt~~-~aA~i~k~lL~~~~~~l~~~sywt~sD~Fee~~~~~~pf~gg--fGL 342 (486)
T PF01229_consen 274 NLPLYITEWNAS------ISPRN--PQHDTCF-KAAYIAKNLLSNDGAFLDSFSYWTFSDRFEENGTPRKPFHGG--FGL 342 (486)
T ss_dssp T--EEEEEEES-------SSTT---GGGGSHH-HHHHHHH-HHHHGGGT-SEEEES-SBS---TTSS-SSSSSS---S-S
T ss_pred CCceeecccccc------cCCCc--chhcccc-chhhHHHHHHHhhhhhhhhhhccchhhhhhccCCCCCceecc--hhh
Confidence 678999998754 22221 1223333 344566666666655567788888631 1111221 2122 367
Q ss_pred EEEeCCCCEEEEchhhHhhhhhccccCCCCE-EEeecCCCCceeEEEEEcCCCCEEEEEEe
Q psy11632 390 IIVNAAKDEFYKQPMFYAIGHFSRFIKPGSR-VLKANSRSRTVEVLATIDKDENHVVVVLF 449 (450)
Q Consensus 390 i~~d~~~g~~~~~~~yy~~g~fsrfvrPG~~-i~~~~~~~~~v~~~A~~~~dg~~vvVv~n 449 (450)
+..+ | .+.|-||++.-+.+- |.+ +..+.+ ...-++.+|.+.|++-|
T Consensus 343 lt~~---g--I~KPa~~A~~~L~~l---g~~~~~~~~~------~~vt~~~~~~~~il~~n 389 (486)
T PF01229_consen 343 LTKL---G--IPKPAYYAFQLLNKL---GDRLVAKGDH------YIVTSKDDGSVQILVWN 389 (486)
T ss_dssp EECC---C--EE-HHHHHHHHHTT-----SEEEEEETT------EEEEE-TTS-EEEEEEE
T ss_pred hhcc---C--CCchHHHHHHHHHhh---CceeEecCCC------ceeEEcCCCeEEEEEec
Confidence 7655 2 356789998877776 667 655442 22244556666666554
No 14
>smart00813 Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.
Probab=97.12 E-value=0.0029 Score=58.80 Aligned_cols=98 Identities=12% Similarity=0.063 Sum_probs=66.5
Q ss_pred CCChHHHHHHHHHHHHHhccCchhhhhhhhhhcCCCCCCCCCCccCccEEEeCCCCEEEEchhhHhhhhhccccCCCCE-
Q psy11632 342 LGSWSRAEQYISDIIENLNHGLVAWLEWNLALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGSR- 420 (450)
Q Consensus 342 ~~~w~~~~~~a~~i~~~l~~~~~a~~~W~~~~~~~gg~~~~~~~~~~li~~d~~~g~~~~~~~yy~~g~fsrfvrPG~~- 420 (450)
..+|..|+..|..++..+|+.-. +.+.-..+ .. + +.+++++..+++.+.+++.||++++|++|.+....
T Consensus 17 ~~tl~dAL~~A~~l~~~~Rn~D~--V~ma~~A~------lv-n-~~~p~~i~~~~~~~~~t~~Yyv~~lfs~~~g~~~l~ 86 (189)
T smart00813 17 QYTLRDALAEAAFLNGLERNSDR--VKMASYAQ------LV-N-VINPDMLTFNGGQAWRTTTYYVFQLFSKHQGGTVLP 86 (189)
T ss_pred cCcHHHHHHHHHHHHHHHhccCc--EEeehhhh------hh-c-cccceEEEeCCCCEEECCcCHHHHHhhhhCCceEEE
Confidence 35899999999998888874321 22221111 00 0 12567777766789999999999999999986665
Q ss_pred EEeecC-------CCCceeEEEEEcCCCCEE-EEEEe
Q psy11632 421 VLKANS-------RSRTVEVLATIDKDENHV-VVVLF 449 (450)
Q Consensus 421 i~~~~~-------~~~~v~~~A~~~~dg~~v-vVv~n 449 (450)
+.+... ....|.++|.+|++|+.+ |.|+|
T Consensus 87 ~~v~~~~~~~~~~~~~~ld~sA~~~~~~~~~~v~vvN 123 (189)
T smart00813 87 VTISSPTYDGEDSDVPALDASASKDEDGGSLTVKVVN 123 (189)
T ss_pred EEeeCCccccCcccCCcEEEEEEEeCCCCEEEEEEEe
Confidence 555432 125799999999987555 55555
No 15
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=97.06 E-value=0.044 Score=53.66 Aligned_cols=203 Identities=15% Similarity=0.158 Sum_probs=118.8
Q ss_pred hHHHHHHHHccchhhccccccccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCC
Q psy11632 73 TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGE 152 (450)
Q Consensus 73 ~~~~~~~~~lf~~~~~~Te~~~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~ 152 (450)
..|++++..|- --|.+.+|+.|=-. |-|.+-+.|--+-.|.+..+.+.|+|++.
T Consensus 63 g~~qD~~~iLK-----------~~GvNyvRlRvwnd------------P~dsngn~yggGnnD~~k~ieiakRAk~~--- 116 (403)
T COG3867 63 GVRQDALQILK-----------NHGVNYVRLRVWND------------PYDSNGNGYGGGNNDLKKAIEIAKRAKNL--- 116 (403)
T ss_pred ChHHHHHHHHH-----------HcCcCeEEEEEecC------------CccCCCCccCCCcchHHHHHHHHHHHHhc---
Confidence 45667776665 25667788877321 11111123333333556678888888887
Q ss_pred CeEEEEe-----ecCCCcccccCCCCCC--CCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCC
Q psy11632 153 PLRLVGS-----AWSAPAWMKTNNALTG--RGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPF 225 (450)
Q Consensus 153 ~~~i~~s-----~WSpP~wMk~n~~~~g--~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~ 225 (450)
++|+++. -|.-|+.=|....... .-.|+..-| +|-...+++|+++||.++.|-+.||-....
T Consensus 117 GmKVl~dFHYSDfwaDPakQ~kPkaW~~l~fe~lk~avy----~yTk~~l~~m~~eGi~pdmVQVGNEtn~gf------- 185 (403)
T COG3867 117 GMKVLLDFHYSDFWADPAKQKKPKAWENLNFEQLKKAVY----SYTKYVLTTMKKEGILPDMVQVGNETNGGF------- 185 (403)
T ss_pred CcEEEeeccchhhccChhhcCCcHHhhhcCHHHHHHHHH----HHHHHHHHHHHHcCCCccceEeccccCCce-------
Confidence 4777753 3777776555544331 123333333 688888999999999999999999987654
Q ss_pred CCCCCCCcc-CHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCC--C-ChhhhHHhh---------eeeEeeecCCCCCC
Q psy11632 226 VPKFNSMGW-HPKSVATWIANNLGPTLRSSQHNATKILAIDDQR--F-VLPWWLEQV---------CNIGLRMFQDKLPI 292 (450)
Q Consensus 226 ~~~~~~~~~-~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~--~-~~~~~~~~v---------~~ia~H~Y~~~~~~ 292 (450)
-||.-.- .-+-++.++.. =..+++.... ++||+..=.+. . .+..+.+.+ .|..+-.|+....
T Consensus 186 --lwp~Ge~~~f~k~a~L~n~-g~~avrev~p-~ikv~lHla~g~~n~~y~~~fd~ltk~nvdfDVig~SyYpyWhgtl- 260 (403)
T COG3867 186 --LWPDGEGRNFDKMAALLNA-GIRAVREVSP-TIKVALHLAEGENNSLYRWIFDELTKRNVDFDVIGSSYYPYWHGTL- 260 (403)
T ss_pred --eccCCCCcChHHHHHHHHH-HhhhhhhcCC-CceEEEEecCCCCCchhhHHHHHHHHcCCCceEEeeeccccccCcH-
Confidence 2331111 45566777663 3445555555 47877642221 1 122233332 2444555554432
Q ss_pred hhhhccccCCCchHHHHHHhcCceeEEecccc
Q psy11632 293 PEKILRKDIPSMNVVERKYLFKLYILVYTAFA 324 (450)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~k~~w~TE~~~ 324 (450)
..|. .++..++.+|+|.+..-|.+.
T Consensus 261 --~nL~-----~nl~dia~rY~K~VmV~Etay 285 (403)
T COG3867 261 --NNLT-----TNLNDIASRYHKDVMVVETAY 285 (403)
T ss_pred --HHHH-----hHHHHHHHHhcCeEEEEEecc
Confidence 2344 345588899999999999754
No 16
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Probab=95.79 E-value=0.71 Score=48.42 Aligned_cols=104 Identities=16% Similarity=0.165 Sum_probs=68.9
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNA 172 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~ 172 (450)
..+|++.+|++|. |++- -| +|. ...+ .+....=..++.+.+++|.. .-|=.+-|.-|-|+-...
T Consensus 69 ~emG~~~~R~SI~---WsRI------fP~g~~--~e~N--~~gl~fY~~l~del~~~gIe-p~vTL~Hfd~P~~L~~~y- 133 (460)
T COG2723 69 KEMGLNAFRTSIE---WSRI------FPNGDG--GEVN--EKGLRFYDRLFDELKARGIE-PFVTLYHFDLPLWLQKPY- 133 (460)
T ss_pred HHcCCCEEEeeee---EEEe------ecCCCC--CCcC--HHHHHHHHHHHHHHHHcCCE-EEEEecccCCcHHHhhcc-
Confidence 3599999999994 3321 11 110 0111 11111223577888888876 344467799999996552
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCC
Q psy11632 173 LTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGD 218 (450)
Q Consensus 173 ~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~ 218 (450)
||.+.++..+.|+.|-..+.+.|+. .+++...+|||....
T Consensus 134 ---gGW~nR~~i~~F~~ya~~vf~~f~d---kVk~W~TFNE~n~~~ 173 (460)
T COG2723 134 ---GGWENRETVDAFARYAATVFERFGD---KVKYWFTFNEPNVVV 173 (460)
T ss_pred ---CCccCHHHHHHHHHHHHHHHHHhcC---cceEEEEecchhhhh
Confidence 5888899988888887777766654 499999999998654
No 17
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=94.76 E-value=0.21 Score=48.29 Aligned_cols=152 Identities=12% Similarity=0.103 Sum_probs=92.3
Q ss_pred HHHHHHHH-cCC-ceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCC-
Q psy11632 193 MFLDFYKR-EQL-SFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRF- 269 (450)
Q Consensus 193 ~~v~~~~~-~Gi-~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~- 269 (450)
...++|+. .|. .|..|++.||-.+.. ..+++|+.+.|- ..+.+++++|.+ .+|--.|...-
T Consensus 120 til~ay~~~~~~d~v~~v~VGnEal~r~--------------~~tasql~~~I~-~vrsav~~agy~-gpV~T~dsw~~~ 183 (305)
T COG5309 120 TILSAYLPYNGWDDVTTVTVGNEALNRN--------------DLTASQLIEYID-DVRSAVKEAGYD-GPVTTVDSWNVV 183 (305)
T ss_pred HHHHHHhccCCCCceEEEEechhhhhcC--------------CCCHHHHHHHHH-HHHHHHHhcCCC-Cceeecccceee
Confidence 44556664 466 789999999998752 257899999997 689999999996 77777675321
Q ss_pred -ChhhhHHhh--eeeEeeecCCCCCChhhhccccCCCchHHHHHHhc--CceeEEeccccCCCCCCCCCCCccccc--cC
Q psy11632 270 -VLPWWLEQV--CNIGLRMFQDKLPIPEKILRKDIPSMNVVERKYLF--KLYILVYTAFAGIKGLFSDKPWDLIKV--QL 342 (450)
Q Consensus 270 -~~~~~~~~v--~~ia~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~k~~w~TE~~~~~~g~~~~~~~~~~~~--~~ 342 (450)
+-|+..+.. .+++.|.|+...+-. ....-+--.++..+...+ +|.+|.||.+ +|.++..+ ..
T Consensus 184 ~~np~l~~~SDfia~N~~aYwd~~~~a--~~~~~f~~~q~e~vqsa~g~~k~~~v~EtG---------WPS~G~~~G~a~ 252 (305)
T COG5309 184 INNPELCQASDFIAANAHAYWDGQTVA--NAAGTFLLEQLERVQSACGTKKTVWVTETG---------WPSDGRTYGSAV 252 (305)
T ss_pred eCChHHhhhhhhhhcccchhccccchh--hhhhHHHHHHHHHHHHhcCCCccEEEeecc---------CCCCCCccCCcC
Confidence 123333322 278899998754221 111000001233443444 4999999974 23322111 12
Q ss_pred CChHHHHHHHHHHHHHhccCchhhhhhhh
Q psy11632 343 GSWSRAEQYISDIIENLNHGLVAWLEWNL 371 (450)
Q Consensus 343 ~~w~~~~~~a~~i~~~l~~~~~a~~~W~~ 371 (450)
.+=+.+..+.+.|.+.||...-..+....
T Consensus 253 pS~anq~~~~~~i~~~~~~~G~d~fvfeA 281 (305)
T COG5309 253 PSVANQKIAVQEILNALRSCGYDVFVFEA 281 (305)
T ss_pred CChhHHHHHHHHHHhhhhccCccEEEeee
Confidence 34556677888899989854444444443
No 18
>PF06964 Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-terminus; InterPro: IPR010720 This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (3.2.1.55 from EC). This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides [].; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process; PDB: 3FW6_A 3II1_A 3S2C_K 1QW9_A 1PZ3_B 1PZ2_B 1QW8_A 3UG4_A 3UG3_A 4ATW_B ....
Probab=92.72 E-value=0.34 Score=44.34 Aligned_cols=93 Identities=19% Similarity=0.214 Sum_probs=58.5
Q ss_pred CCChHHHHHHHHHHHHHhccC-c-hhhhhhhhhhcCCCCCCCCCCccCccEEEeCCCCEEEEchhhHhhhhhccccCCCC
Q psy11632 342 LGSWSRAEQYISDIIENLNHG-L-VAWLEWNLALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGS 419 (450)
Q Consensus 342 ~~~w~~~~~~a~~i~~~l~~~-~-~a~~~W~~~~~~~gg~~~~~~~~~~li~~d~~~g~~~~~~~yy~~g~fsrfvrPG~ 419 (450)
..+|..|+..|..++..+|+. . .---|-.++ +..+...| ...+|..|. +.+.+++.||++..|+++.. .
T Consensus 17 ~~~l~~AL~~A~~l~~~eRnsD~V~ma~~A~l~-~~~~~~~w----~~~li~~~~--~~~~~tpsY~v~~lf~~~~g--~ 87 (177)
T PF06964_consen 17 RYTLRDALAEAAFLNGFERNSDVVKMACYAPLV-NNIGDTQW----TPDLITFDG--DQVFGTPSYYVQKLFSNHRG--D 87 (177)
T ss_dssp --BHHHHHHHHHHHHHHHHTTTTEEEEEEE-SB-STTS----------SEEEETT--SEEEESHHHHHHHHHHHCTT--S
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEeEEccchhh-cccccccc----ccceEEcCC--CCEEECchHHHHHHHHhcCC--C
Confidence 468999999999988888753 2 222333333 21122234 224565554 58889999999999999975 4
Q ss_pred E-EEeecCCCCceeEEEEEcCCCCEEEEEEeC
Q psy11632 420 R-VLKANSRSRTVEVLATIDKDENHVVVVLFN 450 (450)
Q Consensus 420 ~-i~~~~~~~~~v~~~A~~~~dg~~vvVv~nn 450 (450)
+ + ..|.++|-++++|+.++|.+.|
T Consensus 88 ~~l-------~~l~~~As~d~~~~~l~v~vVN 112 (177)
T PF06964_consen 88 TVL-------PPLDVSASRDEDGGELYVKVVN 112 (177)
T ss_dssp EEE-------ESEEEEEEEETTTTEEEEEEEE
T ss_pred eEe-------ccEEEEEEEECCCCEEEEEEEE
Confidence 5 5 4588999999998655444443
No 19
>TIGR03356 BGL beta-galactosidase.
Probab=92.09 E-value=0.26 Score=51.73 Aligned_cols=101 Identities=16% Similarity=0.164 Sum_probs=67.8
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCCC-CccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIPN-DKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNA 172 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~~-d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~ 172 (450)
..+|++.+|++|. |++- .|. + +.++ .+....-..+|.++++.|.. .-+-...|.-|.|+-..
T Consensus 64 ~~~G~~~~R~si~---Wsri------~p~g~---~~~n--~~~~~~y~~~i~~l~~~gi~-pivtL~Hfd~P~~l~~~-- 126 (427)
T TIGR03356 64 KELGVDAYRFSIA---WPRI------FPEGT---GPVN--PKGLDFYDRLVDELLEAGIE-PFVTLYHWDLPQALEDR-- 126 (427)
T ss_pred HHcCCCeEEcccc---hhhc------ccCCC---CCcC--HHHHHHHHHHHHHHHHcCCe-eEEeeccCCccHHHHhc--
Confidence 3599999999993 3321 011 1 1222 11223445788888888765 44446679999986432
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 173 LTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 173 ~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
+|.+.++.-+.|++|...++++|.. .+....+.|||...
T Consensus 127 ---gGw~~~~~~~~f~~ya~~~~~~~~d---~v~~w~t~NEp~~~ 165 (427)
T TIGR03356 127 ---GGWLNRDTAEWFAEYAAVVAERLGD---RVKHWITLNEPWCS 165 (427)
T ss_pred ---CCCCChHHHHHHHHHHHHHHHHhCC---cCCEEEEecCccee
Confidence 5888898888888888888877776 36666999999854
No 20
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=91.87 E-value=0.79 Score=46.20 Aligned_cols=230 Identities=18% Similarity=0.240 Sum_probs=105.6
Q ss_pred HHHHHHHHhcCCCeEEEEeecC--CCcccccCCCCCCCCcc-chHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 141 PLIQQANRLRGEPLRLVGSAWS--APAWMKTNNALTGRGEL-KTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 141 ~~lk~A~~~~~~~~~i~~s~WS--pP~wMk~n~~~~g~G~L-~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
.++..|++.|.. ++--.-.|. -|.||+...... .. +...-+..-.|+.+.+++|+.. -.|++.-+.|||-..
T Consensus 63 ~~~~~a~~~g~~-vrGH~LvW~~~~P~w~~~~~~~~---~~~~~~~~~~l~~~I~~v~~~y~~~-g~i~~WDVvNE~i~~ 137 (320)
T PF00331_consen 63 AILDWARENGIK-VRGHTLVWHSQTPDWVFNLANGS---PDEKEELRARLENHIKTVVTRYKDK-GRIYAWDVVNEAIDD 137 (320)
T ss_dssp HHHHHHHHTT-E-EEEEEEEESSSS-HHHHTSTTSS---BHHHHHHHHHHHHHHHHHHHHTTTT-TTESEEEEEES-B-T
T ss_pred HHHHHHHhcCcc-eeeeeEEEcccccceeeeccCCC---cccHHHHHHHHHHHHHHHHhHhccc-cceEEEEEeeecccC
Confidence 567778777644 443344565 688997651111 00 1123334444555555544433 579999999999865
Q ss_pred CCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCCChh---hhHH----------hheeeEe-
Q psy11632 218 DLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRFVLP---WWLE----------QVCNIGL- 283 (450)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~~~~---~~~~----------~v~~ia~- 283 (450)
... ...+..+.|-..-=.++|..++.-+ ++... ++|++.-|-+-.... .+.+ .|.|||+
T Consensus 138 ~~~-----~~~~r~~~~~~~lG~~yi~~aF~~A-~~~~P-~a~L~~NDy~~~~~~k~~~~~~lv~~l~~~gvpIdgIG~Q 210 (320)
T PF00331_consen 138 DGN-----PGGLRDSPWYDALGPDYIADAFRAA-READP-NAKLFYNDYNIESPAKRDAYLNLVKDLKARGVPIDGIGLQ 210 (320)
T ss_dssp TSS-----SSSBCTSHHHHHHTTCHHHHHHHHH-HHHHT-TSEEEEEESSTTSTHHHHHHHHHHHHHHHTTHCS-EEEEE
T ss_pred CCc-----cccccCChhhhcccHhHHHHHHHHH-HHhCC-CcEEEeccccccchHHHHHHHHHHHHHHhCCCccceechh
Confidence 310 0012222332111012333222211 11223 599999887654321 1111 1236665
Q ss_pred -eecCCCCCChhhhccccCCCchHHHHHHhc---CceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHHHHHh
Q psy11632 284 -RMFQDKLPIPEKILRKDIPSMNVVERKYLF---KLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENL 359 (450)
Q Consensus 284 -H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~---~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i~~~l 359 (450)
|.-.+.. + +.+. +..+++ |+++..||....... .+.+. ...=..|..+...+-..+
T Consensus 211 ~H~~~~~~--~-~~i~---------~~l~~~~~~Gl~i~ITElDv~~~~----~~~~~----~~~~~qA~~~~~~~~~~~ 270 (320)
T PF00331_consen 211 SHFDAGYP--P-EQIW---------NALDRFASLGLPIHITELDVRDDD----NPPDA----EEEEAQAEYYRDFLTACF 270 (320)
T ss_dssp EEEETTSS--H-HHHH---------HHHHHHHTTTSEEEEEEEEEESSS----TTSCH----HHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCC--H-HHHH---------HHHHHHHHcCCceEEEeeeecCCC----CCcch----HHHHHHHHHHHHHHHHHH
Confidence 5443332 2 3333 444555 999999998765210 00000 000112333333333344
Q ss_pred cc---CchhhhhhhhhhcCCCCCCCCCCc-cCccEEEeCCCCEEEEchhhHhhh
Q psy11632 360 NH---GLVAWLEWNLALNTQGGTNWKNNF-LDAPIIVNAAKDEFYKQPMFYAIG 409 (450)
Q Consensus 360 ~~---~~~a~~~W~~~~~~~gg~~~~~~~-~~~li~~d~~~g~~~~~~~yy~~g 409 (450)
.+ .+.+.++|.+. | +.+|.... ...+...|. .+.+.|-|+++.
T Consensus 271 ~~~~~~v~git~Wg~~-D---~~sW~~~~~~~~~~lfd~---~~~~Kpa~~~~~ 317 (320)
T PF00331_consen 271 SHPPAAVEGITWWGFT-D---GYSWRPDTPPDRPLLFDE---DYQPKPAYDAIV 317 (320)
T ss_dssp HTTHCTEEEEEESSSB-T---TGSTTGGHSEG--SSB-T---TSBB-HHHHHHH
T ss_pred hCCccCCCEEEEECCC-C---CCcccCCCCCCCCeeECC---CcCCCHHHHHHH
Confidence 43 58899999875 3 24564330 011223343 345678888774
No 21
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=91.54 E-value=0.45 Score=48.93 Aligned_cols=104 Identities=13% Similarity=0.193 Sum_probs=52.6
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEE--eecCCCcccccCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVG--SAWSAPAWMKTNN 171 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~--s~WSpP~wMk~n~ 171 (450)
..+|+|++|+.+-++. .... .-+.|+++.-| .+|+.|.+.| ++|+. ..-+||.|+....
T Consensus 20 ~~~G~n~vri~~~~W~------~lEP-----~eG~ydF~~lD-----~~l~~a~~~G---i~viL~~~~~~~P~Wl~~~~ 80 (374)
T PF02449_consen 20 KEAGFNTVRIGEFSWS------WLEP-----EEGQYDFSWLD-----RVLDLAAKHG---IKVILGTPTAAPPAWLYDKY 80 (374)
T ss_dssp HHHT-SEEEE-CCEHH------HH-S-----BTTB---HHHH-----HHHHHHHCTT----EEEEEECTTTS-HHHHCCS
T ss_pred HHcCCCEEEEEEechh------hccC-----CCCeeecHHHH-----HHHHHHHhcc---CeEEEEecccccccchhhhc
Confidence 4589999998654431 1111 22567665433 5678887775 44443 3467999997542
Q ss_pred CC------CC----CCc---cc---hHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 172 AL------TG----RGE---LK---TQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 172 ~~------~g----~G~---L~---~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
.- .| .|. .+ +.+.+.+..++...++.|+. .-.|..+.+-|||.+.
T Consensus 81 Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~-~p~vi~~~i~NE~~~~ 141 (374)
T PF02449_consen 81 PEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGD-HPAVIGWQIDNEPGYH 141 (374)
T ss_dssp GCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEECCSTTCT
T ss_pred ccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccc-cceEEEEEeccccCcC
Confidence 11 11 121 11 23444444444444555543 3457888999999863
No 22
>PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A.
Probab=90.59 E-value=0.2 Score=50.30 Aligned_cols=112 Identities=11% Similarity=0.014 Sum_probs=46.9
Q ss_pred HHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhc----CCCCCeEEEEecCCCCChhhh
Q psy11632 199 KREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRS----SQHNATKILAIDDQRFVLPWW 274 (450)
Q Consensus 199 ~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~----~gl~~~kI~~~d~~~~~~~~~ 274 (450)
+++|.+|++-.+.|||... +-+...+++|.++=+. .|+..|++ ... ..+|++|..... .+|
T Consensus 160 ~skgy~I~~WELGNEl~g~-----------g~~~~v~a~qyakD~~-~Lr~il~~iy~~~~~-~P~v~gP~~~~d--~~w 224 (319)
T PF03662_consen 160 ASKGYNIDSWELGNELNGS-----------GVGASVSAEQYAKDFI-QLRKILNEIYKNALP-GPLVVGPGGFFD--ADW 224 (319)
T ss_dssp ESS-GGG--------HHHH-----------SSSTT--HHHHHHHH----HHHHHHHHHH-TT----EEEEEESS---GGG
T ss_pred HHcCCCccccccccccCCC-----------CCCCccCHHHHHHHHH-HHHHHHHHHHhcCCC-CCeEECCCCCCC--HHH
Confidence 4689999999999999853 2467889999887654 46666655 333 378999986432 333
Q ss_pred HH---------hheeeEeeecC-CCCCCh---hhhccccCCC------chHHHHHHhc--CceeEEeccccC
Q psy11632 275 LE---------QVCNIGLRMFQ-DKLPIP---EKILRKDIPS------MNVVERKYLF--KLYILVYTAFAG 325 (450)
Q Consensus 275 ~~---------~v~~ia~H~Y~-~~~~~~---~~~~~~~~~~------~~~~~~~~~~--~k~~w~TE~~~~ 325 (450)
.+ .|.++.+|.|- +...++ +..+++.+-. ..+.++.+++ ++++|++|.+.-
T Consensus 225 ~~~FL~~~g~~~vD~vT~H~Y~lg~g~d~~l~~~~l~p~~Ld~~~~~~~~~~~~v~~~~p~~~~WlGEtg~A 296 (319)
T PF03662_consen 225 LKEFLKASGPGVVDAVTWHHYNLGSGRDPALIEDFLNPSYLDTLADTFQKLQQVVQEYGPGKPVWLGETGSA 296 (319)
T ss_dssp HHHHHHHTTTT--SEEEEEEEEE--TT-TT-HHHHTS--HHHHHHHHHHHHH-----HHH---EEEEEEEEE
T ss_pred HHHHHHhcCCCccCEEEEEecCCCCCchHHHHHHhcChhhhhHHHHHHHHHhhhhcccCCCCCeEEeCcccc
Confidence 32 24589999995 222111 1122211000 1222333444 899999998643
No 23
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=84.85 E-value=2.8 Score=44.66 Aligned_cols=100 Identities=14% Similarity=0.162 Sum_probs=64.3
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEe--ecCCCcccccC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGS--AWSAPAWMKTN 170 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s--~WSpP~wMk~n 170 (450)
..+|++..|++|. |++- .| ++ -..++ .+....-..+|.+.++.|. +.+.+ =|.-|.|+-..
T Consensus 79 ~elG~~~yRfSIs---WsRI------~P~G~--~~~~N--~~gl~~Y~~lid~l~~~GI---~P~vTL~H~dlP~~L~~~ 142 (477)
T PRK15014 79 AEMGFKCFRTSIA---WTRI------FPKGD--EAQPN--EEGLKFYDDMFDELLKYNI---EPVITLSHFEMPLHLVQQ 142 (477)
T ss_pred HHcCCCEEEeccc---ceee------ccCCC--CCCCC--HHHHHHHHHHHHHHHHcCC---EEEEEeeCCCCCHHHHHh
Confidence 3599999999994 3321 11 11 01122 2223344567777777754 44444 49999999431
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCC
Q psy11632 171 NALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPIN 216 (450)
Q Consensus 171 ~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~ 216 (450)
. ||.+.++.-+.|+.|-..++++|... +....++|||..
T Consensus 143 ---y-GGW~n~~~~~~F~~Ya~~~f~~fgdr---Vk~WiT~NEp~~ 181 (477)
T PRK15014 143 ---Y-GSWTNRKVVDFFVRFAEVVFERYKHK---VKYWMTFNEINN 181 (477)
T ss_pred ---c-CCCCChHHHHHHHHHHHHHHHHhcCc---CCEEEEecCccc
Confidence 1 58888888888888777777766644 888889999974
No 24
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=84.56 E-value=2.4 Score=45.14 Aligned_cols=100 Identities=15% Similarity=0.126 Sum_probs=65.0
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNA 172 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~ 172 (450)
..+|++..|++|. |++- .| ++ +.++ .+....=..+|.+.++.|.. .-|-..-|.=|.|+-.
T Consensus 64 ~~lG~~~yRfSIs---WsRI------~P~G~---g~vN--~~gl~~Y~~lid~l~~~GI~-P~VTL~H~dlP~~L~~--- 125 (469)
T PRK13511 64 EEFGVNGIRISIA---WSRI------FPDGY---GEVN--PKGVEYYHRLFAECHKRHVE-PFVTLHHFDTPEALHS--- 125 (469)
T ss_pred HHhCCCEEEeecc---Hhhc------CcCCC---CCcC--HHHHHHHHHHHHHHHHcCCE-EEEEecCCCCcHHHHH---
Confidence 3599999999993 3321 11 11 1122 12222334567777777755 3334556999999954
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 173 LTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 173 ~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
. ||.+.++.-+.|++|-..++++|.. |.....+|||...
T Consensus 126 -~-GGW~n~~~v~~F~~YA~~~~~~fgd----Vk~W~T~NEP~~~ 164 (469)
T PRK13511 126 -N-GDWLNRENIDHFVRYAEFCFEEFPE----VKYWTTFNEIGPI 164 (469)
T ss_pred -c-CCCCCHHHHHHHHHHHHHHHHHhCC----CCEEEEccchhhh
Confidence 2 6899999888888887777665554 6668899999754
No 25
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=84.18 E-value=1.2 Score=47.10 Aligned_cols=101 Identities=21% Similarity=0.223 Sum_probs=62.6
Q ss_pred cccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCC
Q psy11632 95 GISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALT 174 (450)
Q Consensus 95 Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~ 174 (450)
.+|++..|++|. |++ . .| +...+.++ .+....=..+|++.++.|.. .-+-..=|.=|.|+-..
T Consensus 69 ~lg~~~yRfsi~---W~R----i--~P-~g~~g~~n--~~~~~~Y~~~i~~l~~~gi~-P~vtL~H~~~P~~l~~~---- 131 (455)
T PF00232_consen 69 ELGVNAYRFSIS---WSR----I--FP-DGFEGKVN--EEGLDFYRDLIDELLENGIE-PIVTLYHFDLPLWLEDY---- 131 (455)
T ss_dssp HHT-SEEEEE-----HHH----H--ST-TSSSSSS---HHHHHHHHHHHHHHHHTT-E-EEEEEESS--BHHHHHH----
T ss_pred hhccceeeeecc---hhh----e--ee-cccccccC--HhHhhhhHHHHHHHHhhccc-eeeeeeecccccceeec----
Confidence 499999999994 221 0 01 00012222 12223345678888888765 34445568999999542
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCC
Q psy11632 175 GRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPIN 216 (450)
Q Consensus 175 g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~ 216 (450)
||.+.++.-+.|++|...+++.|... +....+.|||..
T Consensus 132 -ggw~~~~~~~~F~~Ya~~~~~~~gd~---V~~w~T~NEp~~ 169 (455)
T PF00232_consen 132 -GGWLNRETVDWFARYAEFVFERFGDR---VKYWITFNEPNV 169 (455)
T ss_dssp -TGGGSTHHHHHHHHHHHHHHHHHTTT---BSEEEEEETHHH
T ss_pred -ccccCHHHHHHHHHHHHHHHHHhCCC---cceEEeccccce
Confidence 68899999988888888888777654 888999999974
No 26
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=83.77 E-value=43 Score=33.74 Aligned_cols=195 Identities=11% Similarity=0.108 Sum_probs=98.2
Q ss_pred ChhHHHHHHHHccchhhccccccccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhc
Q psy11632 71 PVTVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLR 150 (450)
Q Consensus 71 ~~~~~~~~~~~lf~~~~~~Te~~~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~ 150 (450)
+++.-.++++++- -+|+|.+-+-|- |. -+...+ +.|+++- ...+..+|+.|++.|
T Consensus 22 p~~~W~~~l~k~k-----------a~G~n~v~~yv~---W~----~he~~~-----g~~df~g--~~dl~~f~~~a~~~g 76 (319)
T PF01301_consen 22 PPEYWRDRLQKMK-----------AAGLNTVSTYVP---WN----LHEPEE-----GQFDFTG--NRDLDRFLDLAQENG 76 (319)
T ss_dssp -GGGHHHHHHHHH-----------HTT-SEEEEE-----HH----HHSSBT-----TB---SG--GG-HHHHHHHHHHTT
T ss_pred ChhHHHHHHHHHH-----------hCCcceEEEecc---cc----ccCCCC-----Ccccccc--hhhHHHHHHHHHHcC
Confidence 5555555555443 477777766652 11 011112 4455542 245789999999984
Q ss_pred CCCeEEEEee-------cC---CCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHH----HcCCceeeeccCCcCCC
Q psy11632 151 GEPLRLVGSA-------WS---APAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYK----REQLSFWALTTGNEPIN 216 (450)
Q Consensus 151 ~~~~~i~~s~-------WS---pP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~----~~Gi~i~~is~qNEP~~ 216 (450)
|.+++-| |. -|.|+++..... --+..+.+.++...|+..+++.++ ++|=+|-.+-+-||-..
T Consensus 77 ---l~vilrpGpyi~aE~~~gG~P~Wl~~~~~~~-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~GGpII~vQvENEyg~ 152 (319)
T PF01301_consen 77 ---LYVILRPGPYICAEWDNGGLPAWLLRKPDIR-LRTNDPPFLEAVERWYRALAKIIKPLQYTNGGPIIMVQVENEYGS 152 (319)
T ss_dssp ----EEEEEEES---TTBGGGG--GGGGGSTTS--SSSS-HHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEEESSSGGC
T ss_pred ---cEEEecccceecccccchhhhhhhhcccccc-ccccchhHHHHHHHHHHHHHHHHHhhhhcCCCceehhhhhhhhCC
Confidence 5555533 55 689998774221 012334566666666666666655 36789999999999763
Q ss_pred CCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCCC-hh--hhHHhheeeEeeecCCCCCCh
Q psy11632 217 GDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRFV-LP--WWLEQVCNIGLRMFQDKLPIP 293 (450)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~~-~~--~~~~~v~~ia~H~Y~~~~~~~ 293 (450)
. +| .+++++ .|...+++.++..+-....|-.+.. .+ ..+... ..+...+.... .+
T Consensus 153 ~-------------~~------~~~Y~~-~l~~~~~~~g~~~~~~~t~d~~~~~~~~~~~~~g~~-~~~~~~~~~~~-~~ 210 (319)
T PF01301_consen 153 Y-------------GT------DRAYME-ALKDAYRDWGIDPVLLYTTDGPWGSWLPDGGLPGAD-IYATDNFPPGD-NP 210 (319)
T ss_dssp T-------------SS-------HHHHH-HHHHHHHHTT-SSSBEEEEESSSHCCHCCC-TTTGS-CEEEEEETTTS-SH
T ss_pred C-------------cc------cHhHHH-HHHHHHHHhhCccceeeccCCCcccccccCCCCcce-EEeccccCCCc-hH
Confidence 2 11 155565 7888889988864555555432211 11 111111 34455554432 11
Q ss_pred hhhccccCCCchHHHHHHhc-CceeEEeccccC
Q psy11632 294 EKILRKDIPSMNVVERKYLF-KLYILVYTAFAG 325 (450)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~-~k~~w~TE~~~~ 325 (450)
...+. ...+.. +++++.+|...+
T Consensus 211 ~~~~~---------~~~~~~p~~P~~~~E~~~G 234 (319)
T PF01301_consen 211 DEYFG---------DQRSFQPNQPLMCTEFWGG 234 (319)
T ss_dssp HHHHH---------HHHHHHTTS--EEEEEESS
T ss_pred HHHHh---------hhhhcCCCCCeEEEEeccc
Confidence 01222 222222 789999998755
No 27
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=83.61 E-value=3.2 Score=44.21 Aligned_cols=103 Identities=12% Similarity=0.087 Sum_probs=67.0
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNA 172 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~ 172 (450)
..+|++..|++|. |++- .| ++ -+.+ +.+....-..+|.+++++|.. .-|-..-|.-|.|.-..
T Consensus 81 ~~lG~~~yR~si~---WsRi------~P~g~--~~~~--n~~~~~~Y~~~i~~l~~~gi~-p~VtL~H~~~P~~l~~~-- 144 (474)
T PRK09852 81 AEMGFKVFRTSIA---WSRL------FPQGD--ELTP--NQQGIAFYRSVFEECKKYGIE-PLVTLCHFDVPMHLVTE-- 144 (474)
T ss_pred HHcCCCeEEeece---eeee------eeCCC--CCCC--CHHHHHHHHHHHHHHHHcCCE-EEEEeeCCCCCHHHHHh--
Confidence 4599999999994 3321 11 11 0111 222334455778888888755 34446679999997321
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 173 LTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 173 ~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
-||.+.++.-+.|+.|-..+++.|.. .+.....+|||...
T Consensus 145 --~GGW~~~~~~~~F~~ya~~~~~~fgd---~Vk~WiTfNEPn~~ 184 (474)
T PRK09852 145 --YGSWRNRKMVEFFSRYARTCFEAFDG---LVKYWLTFNEINIM 184 (474)
T ss_pred --cCCCCCHHHHHHHHHHHHHHHHHhcC---cCCeEEeecchhhh
Confidence 15888888888888777777766654 48889999999743
No 28
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=83.47 E-value=14 Score=34.11 Aligned_cols=90 Identities=13% Similarity=0.134 Sum_probs=56.7
Q ss_pred HHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCC-ccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCC
Q psy11632 140 IPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRG-ELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGD 218 (450)
Q Consensus 140 ~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G-~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~ 218 (450)
...++++++.+++ +|++.+.-- |- +... .- --.++..+.|++-++++++.+.=.||+|+.=-+.++..
T Consensus 52 ~~~i~~l~~~~~g-~kv~~sigg---~~--~~~~--~~~~~~~~~~~~f~~~~~~~v~~~~~DGidiD~E~~~~~~~--- 120 (210)
T cd00598 52 KGALEELASKKPG-LKVLISIGG---WT--DSSP--FTLASDPASRAAFANSLVSFLKTYGFDGVDIDWEYPGAADN--- 120 (210)
T ss_pred HHHHHHHHHhCCC-CEEEEEEcC---CC--CCCC--chhhcCHHHHHHHHHHHHHHHHHcCCCceEEeeeCCCCcCc---
Confidence 4556666666555 899987521 00 0000 00 11246789999999999998877899997432222110
Q ss_pred CCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCC
Q psy11632 219 LPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQH 256 (450)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl 256 (450)
...+.+..|++ .|+.+|.+.++
T Consensus 121 ---------------~~~~~~~~ll~-~lr~~l~~~~~ 142 (210)
T cd00598 121 ---------------SDRENFITLLR-ELRSALGAANY 142 (210)
T ss_pred ---------------cHHHHHHHHHH-HHHHHhcccCc
Confidence 23477889998 79999988654
No 29
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=82.87 E-value=2.9 Score=44.60 Aligned_cols=102 Identities=18% Similarity=0.149 Sum_probs=64.6
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNA 172 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~ 172 (450)
..+|++..|++|. |++- .| ++ .+.++ .+....=..+|...++.|.. .-|-..=|.-|.|+-..
T Consensus 77 ~~lG~~~yRfSIs---WsRI------~P~G~--~~~~N--~~gl~~Y~~lid~L~~~GI~-P~VTL~H~dlP~~L~~~-- 140 (476)
T PRK09589 77 AEMGFKCFRTSIA---WTRI------FPQGD--ELEPN--EEGLQFYDDLFDECLKQGIE-PVVTLSHFEMPYHLVTE-- 140 (476)
T ss_pred HHcCCCEEEeccc---hhhc------CcCCC--CCCCC--HHHHHHHHHHHHHHHHcCCE-EEEEecCCCCCHHHHHh--
Confidence 3599999999994 3321 11 11 01122 11222334677777887755 23335569999998331
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCC
Q psy11632 173 LTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPIN 216 (450)
Q Consensus 173 ~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~ 216 (450)
. ||.+.++.-+.|++|-...+++| |=.+.....+|||..
T Consensus 141 -y-GGW~n~~~i~~F~~YA~~~f~~f---gdrVk~WiT~NEp~~ 179 (476)
T PRK09589 141 -Y-GGWRNRKLIDFFVRFAEVVFTRY---KDKVKYWMTFNEINN 179 (476)
T ss_pred -c-CCcCChHHHHHHHHHHHHHHHHh---cCCCCEEEEecchhh
Confidence 1 58888988888877777666555 445888999999974
No 30
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=82.10 E-value=12 Score=41.46 Aligned_cols=128 Identities=13% Similarity=0.213 Sum_probs=70.2
Q ss_pred cccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEe-e-cCCCcccccC
Q psy11632 93 SIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGS-A-WSAPAWMKTN 170 (450)
Q Consensus 93 ~~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s-~-WSpP~wMk~n 170 (450)
...+|+|.+|+.+-++.+- .++.+.|++++.| .+ +|..|++.|.. .|++. | =.||.||...
T Consensus 39 mk~~G~N~V~ig~faW~~~-----------eP~eG~fdf~~~D---~~-~l~~a~~~Gl~--vil~t~P~g~~P~Wl~~~ 101 (673)
T COG1874 39 MKALGLNTVRIGYFAWNLH-----------EPEEGKFDFTWLD---EI-FLERAYKAGLY--VILRTGPTGAPPAWLAKK 101 (673)
T ss_pred HHHhCCCeeEeeeEEeecc-----------CccccccCcccch---HH-HHHHHHhcCce--EEEecCCCCCCchHHhcC
Confidence 3679999999966554221 1224667766434 45 89999888643 44454 4 3478888432
Q ss_pred C----------CCCC-CC--ccch--HHHHHHHHHHHHHHHHH-HHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCcc
Q psy11632 171 N----------ALTG-RG--ELKT--QYYQTWAQYLIMFLDFY-KREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGW 234 (450)
Q Consensus 171 ~----------~~~g-~G--~L~~--~~y~~~A~Yl~~~v~~~-~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~ 234 (450)
- .... ++ +.++ .+|..++..+..-+..- ...|..| ++.||+=.+.. ...-|..
T Consensus 102 ~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v--~~w~~dneY~~---------~~~~~~~ 170 (673)
T COG1874 102 YPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAV--ITWQNDNEYGG---------HPCYCDY 170 (673)
T ss_pred ChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCce--eEEEccCccCC---------ccccccc
Confidence 2 1111 12 2332 47888888766666554 3455555 55555543431 1233444
Q ss_pred CHHHHHHHHHHhhH
Q psy11632 235 HPKSVATWIANNLG 248 (450)
Q Consensus 235 ~~~~~~~fi~~~L~ 248 (450)
...-.+.++++..+
T Consensus 171 ~~~~f~~wLk~~yg 184 (673)
T COG1874 171 CQAAFRLWLKKGYG 184 (673)
T ss_pred cHHHHHHHHHhCcc
Confidence 55555555554444
No 31
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=81.38 E-value=19 Score=35.11 Aligned_cols=121 Identities=10% Similarity=0.083 Sum_probs=66.9
Q ss_pred HHHHHHHHHhcCCCeEEEEee--cCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 140 IPLIQQANRLRGEPLRLVGSA--WSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 140 ~~~lk~A~~~~~~~~~i~~s~--WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
..-+...|+.+|+ +|++.|. |.- ......-.-.-+..+.+.|++=++++++.|.=.||+|+ |+
T Consensus 58 ~~~~~~lK~~~p~-lKvllSiGG~~~-----~~~~~~~~~~~~~~~~~~fv~S~~~~l~~~~fDGiDiD---------wE 122 (253)
T cd06544 58 PEAVKSIKAQHPN-VKVVISIGGRGV-----QNNPTPFDPSNVDSWVSNAVSSLTSIIQTYNLDGIDID---------YE 122 (253)
T ss_pred HHHHHHHHHhCCC-cEEEEEeCCCCC-----CCCccccCchhhhhHHHHHHHHHHHHHHHhCCCceeee---------cc
Confidence 3456677778887 9999985 211 00000000011224566777778888888876788885 22
Q ss_pred CCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCC---CChhh---hHHhheeeEeeecCCC
Q psy11632 218 DLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQR---FVLPW---WLEQVCNIGLRMFQDK 289 (450)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~---~~~~~---~~~~v~~ia~H~Y~~~ 289 (450)
. | .-+.+....+++ .|+.+|++.++-.+-.+++.... ...+. +.+.+.-+.++.|++.
T Consensus 123 ~-----------~--~~d~~~f~~ll~-~l~~~l~~~~~lt~a~vap~~~~~~~~y~~~~~~~~d~id~~~~qfy~~~ 186 (253)
T cd06544 123 H-----------F--PADPDTFVECIG-QLITELKNNGVIKVASIAPSEDAEQSHYLALYNAYGDYIDYVNYQFYNYG 186 (253)
T ss_pred c-----------C--CcCHHHHHHHHH-HHHHHhhhcCCeEEEEecCCccccccccHHHHHHhhCceeEEEhhhhCCC
Confidence 1 1 123677888888 79999998875312222333322 11122 2222335777777654
No 32
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]
Probab=80.72 E-value=80 Score=33.31 Aligned_cols=322 Identities=12% Similarity=0.114 Sum_probs=153.4
Q ss_pred hHHHHHHHHccchhhccccccccccccCCceeeCCCCCCCCCcccCCC--CCCccCCCCC--Ccccc--ccccHHHHHHH
Q psy11632 73 TVVDTVHKKYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDI--PNDKKLEKFN--LTTED--FQYKIPLIQQA 146 (450)
Q Consensus 73 ~~~~~~~~~lf~~~~~~Te~~~Glg~si~R~~iG~~d~~~~~yt~~~~--~~d~~~~~f~--~~~~d--~~~~~~~lk~A 146 (450)
..|+++++++- .|..-++|++ |+| |- ..|.+.|. |-|.--..++ |.... .-+.-.|+..|
T Consensus 49 G~RkDVle~lk-----------~Lk~P~lR~P-GGn-Fv-s~Y~WeDGIGP~e~Rp~rldlaW~t~EtN~~Gt~EF~~~~ 114 (501)
T COG3534 49 GFRKDVLEALK-----------DLKIPVLRWP-GGN-FV-SGYHWEDGIGPREERPRRLDLAWGTTETNEFGTHEFMDWC 114 (501)
T ss_pred hhHHHHHHHHH-----------hcCCceeecC-Ccc-cc-cccccccCcCchhhCchhhcccccccccccccHHHHHHHH
Confidence 46788887765 4888899999 444 43 24666442 1111111122 11111 12345789999
Q ss_pred HHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHH----HHHHHHH-HcCC----ceeeeccCCcCCCC
Q psy11632 147 NRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLI----MFLDFYK-REQL----SFWALTTGNEPING 217 (450)
Q Consensus 147 ~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~----~~v~~~~-~~Gi----~i~~is~qNEP~~~ 217 (450)
+..|.. .-+-.+ + |.+.| +.-..|-+|+. .+..-.+ ++|- .+.+..+.||=+-
T Consensus 115 e~iGae-p~~avN-------~-------Gsrgv--d~ar~~vEY~n~pggtywsdlR~~~G~~~P~nvK~w~lGNEm~G- 176 (501)
T COG3534 115 ELIGAE-PYIAVN-------L-------GSRGV--DEARNWVEYCNHPGGTYWSDLRRENGREEPWNVKYWGLGNEMDG- 176 (501)
T ss_pred HHhCCc-eEEEEe-------c-------CCccH--HHHHHHHHHccCCCCChhHHHHHhcCCCCCcccceEEeccccCC-
Confidence 999765 222222 2 11222 23233333322 1122222 2333 5666888999764
Q ss_pred CCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCC---ChhhhHHhhe--------eeEeeec
Q psy11632 218 DLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRF---VLPWWLEQVC--------NIGLRMF 286 (450)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~---~~~~~~~~v~--------~ia~H~Y 286 (450)
+|.-=+-+..|...+.. ..+..++=-..+ .+.+++..... ..+.|.+.|+ +|..|.|
T Consensus 177 ----------pWq~G~~~a~EY~~~A~-e~~k~~k~~d~t-~e~~v~g~a~~~n~~~~~W~~~vl~~~~e~vD~ISlH~Y 244 (501)
T COG3534 177 ----------PWQCGHKTAPEYGRLAN-EYRKYMKYFDPT-IENVVCGSANGANPTDPNWEAVVLEEAYERVDYISLHYY 244 (501)
T ss_pred ----------CcccccccCHHHHHHHH-HHHHHHhhcCcc-ccceEEeecCCCCCCchHHHHHHHHHHhhhcCeEEEEEe
Confidence 44444556667666544 234433322222 45555543322 2366766554 8999999
Q ss_pred CCCCCCh-hhhccccCCC----chHHHHHH----hc----CceeEEeccccCC---CCCCCCCCCccccc---cCCChHH
Q psy11632 287 QDKLPIP-EKILRKDIPS----MNVVERKY----LF----KLYILVYTAFAGI---KGLFSDKPWDLIKV---QLGSWSR 347 (450)
Q Consensus 287 ~~~~~~~-~~~~~~~~~~----~~~~~~~~----~~----~k~~w~TE~~~~~---~g~~~~~~~~~~~~---~~~~w~~ 347 (450)
-|....- ...+.+.+.- ..|+..+. ++ ...|-+-|+..-. +.-.-.-||.+... +.-+...
T Consensus 245 ~Gn~~~~t~ny~~~~~~~~~~i~~l~~~~d~Vk~k~r~kk~v~l~fDEWnvWy~~~~~d~~~~~w~~~p~~Le~~ytl~D 324 (501)
T COG3534 245 KGNATDDTPNYWAKSLKLDRYIDDLIKKIDYVKAKKRSKKRVGLSFDEWNVWYHVRKEDLDRIPWGTAPGLLEQIYTLED 324 (501)
T ss_pred cCccccCcHHHHHHHhhhhHHHHHHHHHHHHHHhccccccceeEEEecccceeecchhhhccccCCCCCccccccchHHH
Confidence 6654221 0111110000 01112211 11 2345555653210 00000012221111 1224555
Q ss_pred HHHHHHHHHHHhccCchhhhhhhhhhcCCCCCCCCCCccCccEEEeCCCCEEEEchhhHhhhhhccccCCCCE-EEeecC
Q psy11632 348 AEQYISDIIENLNHGLVAWLEWNLALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIKPGSR-VLKANS 426 (450)
Q Consensus 348 ~~~~a~~i~~~l~~~~~a~~~W~~~~~~~gg~~~~~~~~~~li~~d~~~g~~~~~~~yy~~g~fsrfvrPG~~-i~~~~~ 426 (450)
|+..+..++-.+++ +.-+.|.=+.+ |+ | .-++|+... +|...+++.||++-+++.|=|-=+. +.++..
T Consensus 325 al~~g~~l~~f~k~--sdrV~iAniAQ------lV-N-vi~ai~~ek-gg~~~~~~~y~~~~~~~~~g~~~~l~~~v~~p 393 (501)
T COG3534 325 ALFAGSLLNIFHKH--SDRVRIANIAQ------LV-N-VLAAIMTEK-GGPAWLTPIYYPFQMASVHGRGTALKVAVDSP 393 (501)
T ss_pred HHHHHHHHHHHHhh--cceeehhHHHH------HH-H-HhhheeecC-CCcceeeehhhhhhheeeccCceEEEEEeccC
Confidence 66555554444332 22233321111 11 1 114555543 4667789999999999999885444 555542
Q ss_pred --------CCCceeEEEEEcCC-CCEEEEEEe
Q psy11632 427 --------RSRTVEVLATIDKD-ENHVVVVLF 449 (450)
Q Consensus 427 --------~~~~v~~~A~~~~d-g~~vvVv~n 449 (450)
...-|.++|-.+++ |.+.|-|+|
T Consensus 394 ~yd~~~~~~vp~ld~sas~~~~~~~l~i~vvN 425 (501)
T COG3534 394 TYDCELAEDVPYLDASASYDEEGGELTIFVVN 425 (501)
T ss_pred ceeccccccCcceeeeeeecccCCeEEEEEEe
Confidence 23458889999999 455555555
No 33
>COG4124 ManB Beta-mannanase [Carbohydrate transport and metabolism]
Probab=80.53 E-value=22 Score=35.99 Aligned_cols=159 Identities=16% Similarity=0.068 Sum_probs=88.6
Q ss_pred EEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCcc
Q psy11632 155 RLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGW 234 (450)
Q Consensus 155 ~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~ 234 (450)
+|-.-|||+++-.+-+.... .-..-...|++--.=+++-+.+|+..++-.-+..+.=|+...+ + .|- .|
T Consensus 132 ~is~~p~s~~~n~~i~~~~~-s~~~l~~~Y~~~~ski~D~~~~~~s~~~vtiy~r~~mE~n~~~---F-----wWg--~~ 200 (355)
T COG4124 132 KISIEPWSWSANWRITDIED-SSPILSGNYDAMMSKIGDALAAYKSNQVVTIYWRPEMEMNSGW---F-----WWG--FW 200 (355)
T ss_pred ccccCcccccccceeccccc-cchHhhhhHHHHHHHHHHHHHHhcCCCceEEEechhhccCCCe---e-----eec--cC
Confidence 45567888877665543322 1122235777766667777777775544344589999988664 1 332 57
Q ss_pred CHHHHHHHHHHhhHHHHhc-CCCCCeEEEEecCCCC--Chhh-hH--HhheeeEeeecCCCCCChh-----hhccccCCC
Q psy11632 235 HPKSVATWIANNLGPTLRS-SQHNATKILAIDDQRF--VLPW-WL--EQVCNIGLRMFQDKLPIPE-----KILRKDIPS 303 (450)
Q Consensus 235 ~~~~~~~fi~~~L~~~l~~-~gl~~~kI~~~d~~~~--~~~~-~~--~~v~~ia~H~Y~~~~~~~~-----~~~~~~~~~ 303 (450)
.++|...+-+ .|..-|++ +|+..+|.+ ++.+.. .... |+ +.|..+|.-.|+.+..+.. ..+.+-..
T Consensus 201 d~~~yk~lw~-~~~dy~~~~r~l~~lk~~-yspn~~~~~~~~yYPGd~YVDiVGL~~ysd~~~n~~~~~~~~tyaelt~- 277 (355)
T COG4124 201 DPNQYKQLWI-RLHDYLRKSRGLPWLKFM-YSPNGGFKGLEAYYPGDNYVDIVGLDVYSDDPYNQGDTGRDKTYAELTG- 277 (355)
T ss_pred CHHHHHHHHH-HHHHHHhhccCCCeeEEE-EcCCCCcccchhcCCCCceeeeeeeeccccCccccccccccccHHHHhc-
Confidence 8888877766 46666665 478766665 444432 1111 22 2344677777776543310 11110000
Q ss_pred chHHHHHHhcCceeEEeccccCCCC
Q psy11632 304 MNVVERKYLFKLYILVYTAFAGIKG 328 (450)
Q Consensus 304 ~~~~~~~~~~~k~~w~TE~~~~~~g 328 (450)
.-....+.++|++|++|....+.|
T Consensus 278 -~gy~~~~~~nKPf~faElGp~~~~ 301 (355)
T COG4124 278 -PGYNRVAGFNKPFGFAELGPEGGG 301 (355)
T ss_pred -CcchhhhhcCCceeeecccccCCC
Confidence 000123445999999998765433
No 34
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=80.52 E-value=4.2 Score=43.28 Aligned_cols=100 Identities=16% Similarity=0.138 Sum_probs=65.9
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNA 172 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~ 172 (450)
..+|++..|++|. |++- .| ++ +.++ .+....=..+|...++.|.. .-|-..=|.=|.|+-..
T Consensus 63 ~~lG~~~yRfSIs---WsRI------~P~g~---~~~N--~~gl~~Y~~lid~l~~~GI~-P~VTL~H~dlP~~L~~~-- 125 (467)
T TIGR01233 63 EEYGVNGIRISIA---WSRI------FPTGY---GEVN--EKGVEFYHKLFAECHKRHVE-PFVTLHHFDTPEALHSN-- 125 (467)
T ss_pred HHcCCCEEEEecc---hhhc------cCCCC---CCcC--HHHHHHHHHHHHHHHHcCCE-EEEeccCCCCcHHHHHc--
Confidence 4599999999994 4331 11 11 1222 11222234567777777655 23335569999999542
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 173 LTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 173 ~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
||.+.++.-+.|++|-..+++.|. . +.....+|||...
T Consensus 126 ---GGW~n~~~v~~F~~YA~~~f~~fg-d---Vk~WiT~NEP~~~ 163 (467)
T TIGR01233 126 ---GDFLNRENIEHFIDYAAFCFEEFP-E---VNYWTTFNEIGPI 163 (467)
T ss_pred ---CCCCCHHHHHHHHHHHHHHHHHhC-C---CCEEEEecchhhh
Confidence 689999999999988888888775 2 5567779999854
No 35
>PRK10150 beta-D-glucuronidase; Provisional
Probab=80.10 E-value=40 Score=36.96 Aligned_cols=192 Identities=16% Similarity=0.088 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEE
Q psy11632 183 YYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKIL 262 (450)
Q Consensus 183 ~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~ 262 (450)
..+.+.+-+...|+..+. -=.|-.-|+.||+.... +....+++ .|...+++... ++.+
T Consensus 388 ~~~~~~~~~~~mv~r~~N-HPSIi~Ws~gNE~~~~~------------------~~~~~~~~-~l~~~~k~~Dp--tR~v 445 (604)
T PRK10150 388 TQQAHLQAIRELIARDKN-HPSVVMWSIANEPASRE------------------QGAREYFA-PLAELTRKLDP--TRPV 445 (604)
T ss_pred HHHHHHHHHHHHHHhccC-CceEEEEeeccCCCccc------------------hhHHHHHH-HHHHHHHhhCC--CCce
Confidence 334444444444444333 33566788899986421 12234444 45555555443 3444
Q ss_pred EecCC---CCChhhhHHhheeeEeeecCCCCC---Ch---hhhccccCCCchHHHHHHhcCceeEEeccccCC-CCCCCC
Q psy11632 263 AIDDQ---RFVLPWWLEQVCNIGLRMFQDKLP---IP---EKILRKDIPSMNVVERKYLFKLYILVYTAFAGI-KGLFSD 332 (450)
Q Consensus 263 ~~d~~---~~~~~~~~~~v~~ia~H~Y~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~k~~w~TE~~~~~-~g~~~~ 332 (450)
....+ ..........++.+++|.|-+... +. ...+. ..+...++.++|++.+||++.++ .|..+.
T Consensus 446 t~~~~~~~~~~~~~~~~~~Dv~~~N~Y~~wy~~~~~~~~~~~~~~-----~~~~~~~~~~~kP~~isEyg~~~~~~~h~~ 520 (604)
T PRK10150 446 TCVNVMFATPDTDTVSDLVDVLCLNRYYGWYVDSGDLETAEKVLE-----KELLAWQEKLHKPIIITEYGADTLAGLHSM 520 (604)
T ss_pred EEEecccCCcccccccCcccEEEEcccceecCCCCCHHHHHHHHH-----HHHHHHHHhcCCCEEEEccCCccccccccC
Confidence 43321 111112234455778776644221 10 00111 11223444458999999997542 111111
Q ss_pred CCCccccccCCChHH--HHHHHHHHHHHhc--cCchhhhhhhhhhcC--CCCCCCCCCccCccEEEeCCCCEEEEchhhH
Q psy11632 333 KPWDLIKVQLGSWSR--AEQYISDIIENLN--HGLVAWLEWNLALNT--QGGTNWKNNFLDAPIIVNAAKDEFYKQPMFY 406 (450)
Q Consensus 333 ~~~~~~~~~~~~w~~--~~~~a~~i~~~l~--~~~~a~~~W~~~~~~--~gg~~~~~~~~~~li~~d~~~g~~~~~~~yy 406 (450)
.+ ..|+. -..+.+.....+. -...+-+.|+++.-. .+.....++ +.|++..|. .+.+.+|
T Consensus 521 ~~--------~~~~ee~q~~~~~~~~~~~~~~p~~~G~~iW~~~D~~~~~g~~~~~g~-~~Gl~~~dr-----~~k~~~~ 586 (604)
T PRK10150 521 YD--------DMWSEEYQCAFLDMYHRVFDRVPAVVGEQVWNFADFATSQGILRVGGN-KKGIFTRDR-----QPKSAAF 586 (604)
T ss_pred CC--------CCCCHHHHHHHHHHHHHHHhcCCceEEEEEEeeeccCCCCCCcccCCC-cceeEcCCC-----CChHHHH
Confidence 11 11221 1112222233342 356777888876321 111112233 568775553 2466777
Q ss_pred hhhhhcccc
Q psy11632 407 AIGHFSRFI 415 (450)
Q Consensus 407 ~~g~fsrfv 415 (450)
.++.--+-+
T Consensus 587 ~~k~~~~~~ 595 (604)
T PRK10150 587 LLKKRWTGI 595 (604)
T ss_pred HHHHHhhcC
Confidence 777554444
No 36
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=79.55 E-value=5.8 Score=42.33 Aligned_cols=103 Identities=13% Similarity=0.089 Sum_probs=63.6
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNA 172 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~ 172 (450)
..+|++..|++|. |++- .| ++ .+.++ .+...+=..+|...++.|.. .-|-..=|.=|.|+-..
T Consensus 83 ~~lG~~aYRfSIs---WsRI------~P~G~--~~~~N--~~gl~~Y~~lId~L~~~GI~-P~VTL~H~dlP~~L~~~-- 146 (478)
T PRK09593 83 AEMGFKTYRMSIA---WTRI------FPKGD--ELEPN--EAGLQFYEDIFKECHKYGIE-PLVTITHFDCPMHLIEE-- 146 (478)
T ss_pred HHcCCCEEEEecc---hhhc------ccCCC--CCCCC--HHHHHHHHHHHHHHHHcCCE-EEEEecccCCCHHHHhh--
Confidence 3499999999994 3331 11 11 01122 11122234567777777654 23335569999998321
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 173 LTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 173 ~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
. ||.+.++.-+.|++|-..+++.| |=.+.....+|||...
T Consensus 147 -~-GGW~n~~~v~~F~~YA~~~~~~f---gdrVk~WiT~NEP~~~ 186 (478)
T PRK09593 147 -Y-GGWRNRKMVGFYERLCRTLFTRY---KGLVKYWLTFNEINMI 186 (478)
T ss_pred -c-CCCCChHHHHHHHHHHHHHHHHh---cCcCCEEEeecchhhh
Confidence 1 58888888777777766665544 5558899999999854
No 37
>PLN02849 beta-glucosidase
Probab=79.46 E-value=4.5 Score=43.42 Aligned_cols=101 Identities=17% Similarity=0.166 Sum_probs=65.9
Q ss_pred cccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCC
Q psy11632 95 GISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNAL 173 (450)
Q Consensus 95 Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~ 173 (450)
.+|++..|+.|. |++- .| ++ +.++ .+....=..++.+.++.|.. .-|-..=|.=|.|+-..
T Consensus 90 ~lG~~aYRfSIs---WsRI------~P~G~---g~vN--~~gl~fY~~lid~l~~~GI~-P~VTL~H~dlP~~L~~~--- 151 (503)
T PLN02849 90 ETGLDAFRFSIS---WSRL------IPNGR---GSVN--PKGLQFYKNFIQELVKHGIE-PHVTLFHYDHPQYLEDD--- 151 (503)
T ss_pred HcCCCeEEEecc---HHhc------CcCCC---CCCC--HHHHHHHHHHHHHHHHcCCe-EEEeecCCCCcHHHHHh---
Confidence 499999999993 3321 11 11 1122 21222234677788888765 23335579999998431
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 174 TGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 174 ~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
. ||.+.++.-+.|++|-..++++|.. .+.....+|||...
T Consensus 152 y-GGW~nr~~v~~F~~YA~~~f~~fgD---rVk~WiT~NEP~~~ 191 (503)
T PLN02849 152 Y-GGWINRRIIKDFTAYADVCFREFGN---HVKFWTTINEANIF 191 (503)
T ss_pred c-CCcCCchHHHHHHHHHHHHHHHhcC---cCCEEEEecchhhh
Confidence 1 5889999888888887777766654 48888899999853
No 38
>PLN02814 beta-glucosidase
Probab=78.46 E-value=5.1 Score=43.01 Aligned_cols=102 Identities=15% Similarity=0.122 Sum_probs=65.4
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCC
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNA 172 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~ 172 (450)
..+|++..|++|. |++- .| ++ +.++ .+....=..+|...++.|.. .-|-..=|.=|.|+-..
T Consensus 87 k~lG~~ayRfSIs---WsRI------~P~G~---g~~N--~~Gl~fY~~lId~l~~~GI~-P~VTL~H~dlP~~L~~~-- 149 (504)
T PLN02814 87 AEMGLESFRFSIS---WSRL------IPNGR---GLIN--PKGLLFYKNLIKELRSHGIE-PHVTLYHYDLPQSLEDE-- 149 (504)
T ss_pred HHcCCCEEEEecc---Hhhc------CcCCC---CCCC--HHHHHHHHHHHHHHHHcCCc-eEEEecCCCCCHHHHHh--
Confidence 3599999999994 3321 11 11 1122 11222234677788888766 33445679999998542
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 173 LTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 173 ~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
. ||.+.++.-+.|++|-..++++| |=.+.....+|||...
T Consensus 150 -y-GGW~n~~~i~~F~~YA~~~f~~f---gdrVk~WiT~NEP~~~ 189 (504)
T PLN02814 150 -Y-GGWINRKIIEDFTAFADVCFREF---GEDVKLWTTINEATIF 189 (504)
T ss_pred -c-CCcCChhHHHHHHHHHHHHHHHh---CCcCCEEEeccccchh
Confidence 2 58888988877777766666554 4558888999999854
No 39
>PLN02998 beta-glucosidase
Probab=76.70 E-value=5.8 Score=42.53 Aligned_cols=101 Identities=17% Similarity=0.129 Sum_probs=66.2
Q ss_pred cccccCCceeeCCCCCCCCCcccCCCC-CCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCC
Q psy11632 95 GISYAFGRVPIGGCDFSTRAYTYDDIP-NDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNAL 173 (450)
Q Consensus 95 Glg~si~R~~iG~~d~~~~~yt~~~~~-~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~ 173 (450)
.+|++..|+.|. |++- .| ++ +.++ .+...+=..+|...++.|.. .-|-..-|.=|.|+-..
T Consensus 93 ~lG~~~YRfSIs---WsRI------~P~G~---g~vN--~~gl~~Y~~lid~L~~~GIe-P~VTL~H~dlP~~L~~~--- 154 (497)
T PLN02998 93 DMGLEAYRFSIS---WSRL------LPSGR---GPIN--PKGLQYYNNLIDELITHGIQ-PHVTLHHFDLPQALEDE--- 154 (497)
T ss_pred HcCCCeEEeecc---HHhc------CcCCC---CCcC--HHHHHHHHHHHHHHHHcCCc-eEEEecCCCCCHHHHHh---
Confidence 499999999994 3321 11 11 1222 22222334677788888766 33445679999998542
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 174 TGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 174 ~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
. ||.|.++.-+.|++|-..++++|. =.+.+...+|||...
T Consensus 155 y-GGW~n~~~v~~F~~YA~~~~~~fg---drVk~WiT~NEP~~~ 194 (497)
T PLN02998 155 Y-GGWLSQEIVRDFTAYADTCFKEFG---DRVSHWTTINEVNVF 194 (497)
T ss_pred h-CCcCCchHHHHHHHHHHHHHHHhc---CcCCEEEEccCcchh
Confidence 1 588889888888887777766554 448889999999854
No 40
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
Probab=75.67 E-value=30 Score=34.35 Aligned_cols=86 Identities=9% Similarity=0.055 Sum_probs=54.3
Q ss_pred cHHHHHHHHHhcCCCeEEEEee--cCCCcccccCCCCCCCCcc-chHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCC
Q psy11632 139 KIPLIQQANRLRGEPLRLVGSA--WSAPAWMKTNNALTGRGEL-KTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPI 215 (450)
Q Consensus 139 ~~~~lk~A~~~~~~~~~i~~s~--WSpP~wMk~n~~~~g~G~L-~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~ 215 (450)
...+++.+++.+++ +|++.|. |.. .+.... .-+ .++..+.|++=++++++.+.=.||+|+
T Consensus 53 ~~~~~~~~k~~~~~-lkvlisiGG~~~-----~s~~fs--~~~~~~~~R~~fi~siv~~l~~~~fDGidiD--------- 115 (299)
T cd02879 53 FSTFTETVKRKNPS-VKTLLSIGGGGS-----DSSAFA--AMASDPTARKAFINSSIKVARKYGFDGLDLD--------- 115 (299)
T ss_pred HHHHHHHHHHhCCC-CeEEEEEeCCCC-----CCchhh--HHhCCHHHHHHHHHHHHHHHHHhCCCceeec---------
Confidence 34566677888887 9999884 210 000010 011 246889999999999998866788886
Q ss_pred CCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhc
Q psy11632 216 NGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRS 253 (450)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~ 253 (450)
|+ ||+..=+.+....|++ .|+.+|++
T Consensus 116 WE-----------~P~~~~d~~n~~~ll~-elr~~l~~ 141 (299)
T cd02879 116 WE-----------FPSSQVEMENFGKLLE-EWRAAVKD 141 (299)
T ss_pred cc-----------CCCChhHHHHHHHHHH-HHHHHHHH
Confidence 32 2322112345667777 79999974
No 41
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=75.59 E-value=4 Score=43.51 Aligned_cols=95 Identities=9% Similarity=0.008 Sum_probs=54.1
Q ss_pred HHHHhcCceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhcc--CchhhhhhhhhhcCCCCCCCC
Q psy11632 308 ERKYLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLNH--GLVAWLEWNLALNTQGGTNWK 382 (450)
Q Consensus 308 ~~~~~~~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~~--~~~a~~~W~~~~~~~gg~~~~ 382 (450)
.+++.|+++|++||.+.+..+ . .+..+. ..+-.+...+..+| ...+.. .+-+|+.|.++.+- .|.
T Consensus 359 ~~~~~Y~~Pi~ItENG~~~~d----~-~~~~g~-i~D~~Ri~Yl~~hl~~~~~Ai~dGv~V~GY~~WSl~Dn~----Ew~ 428 (474)
T PRK09852 359 MMYDRYQKPLFLVENGLGAKD----E-IAANGE-INDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLV----SAS 428 (474)
T ss_pred HHHHhcCCCEEEeCCCCCCCC----C-cCCCCc-cCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccc----ccc
Confidence 555677889999998765211 0 010010 11223444444444 444543 47899999997543 243
Q ss_pred CC---ccCccEEEeCCCC-----EEEEchhhHhhhhhc
Q psy11632 383 NN---FLDAPIIVNAAKD-----EFYKQPMFYAIGHFS 412 (450)
Q Consensus 383 ~~---~~~~li~~d~~~g-----~~~~~~~yy~~g~fs 412 (450)
.+ ...||+.||.++. +=++.+.+|-++.+.
T Consensus 429 ~G~y~~RfGLv~VD~~~~~~~t~~R~pK~S~~wy~~ii 466 (474)
T PRK09852 429 TGEMSKRYGFVYVDRDDAGNGTLTRTRKKSFWWYKKVI 466 (474)
T ss_pred CCCccceeeeEEECCCCCCCcccceecccHHHHHHHHH
Confidence 22 2469999998742 334566677766654
No 42
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=71.83 E-value=7 Score=41.71 Aligned_cols=97 Identities=12% Similarity=0.076 Sum_probs=56.0
Q ss_pred HHHHHhcCceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhc-cC--chhhhhhhhhhcCCCCCC
Q psy11632 307 VERKYLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLN-HG--LVAWLEWNLALNTQGGTN 380 (450)
Q Consensus 307 ~~~~~~~~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~-~~--~~a~~~W~~~~~~~gg~~ 380 (450)
..+++.|+++|++||.+.+..+ ..+..+. ..+-.+...+...| ..++. .| +-+|+.|.++.+- .
T Consensus 361 ~~~~~~Y~~Pi~ItENG~~~~d-----~~~~~g~-i~D~~Ri~Yl~~hl~~l~~Ai~~dGv~v~GY~~WSl~Dnf----E 430 (477)
T PRK15014 361 CELYERYQKPLFIVENGFGAYD-----KVEEDGS-INDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCV----S 430 (477)
T ss_pred HHHHHhcCCCEEEeCCCCCCCC-----CcCcCCc-cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh----c
Confidence 3556677889999998765211 0010000 11223444444444 44563 44 6799999998553 2
Q ss_pred CCC---CccCccEEEeCCCC-----EEEEchhhHhhhhhcc
Q psy11632 381 WKN---NFLDAPIIVNAAKD-----EFYKQPMFYAIGHFSR 413 (450)
Q Consensus 381 ~~~---~~~~~li~~d~~~g-----~~~~~~~yy~~g~fsr 413 (450)
|.. ....||+.||.++. +=++.+.+|-++++.|
T Consensus 431 w~~G~y~~RfGl~~VD~~~~~~~~~~R~pK~S~~wy~~ii~ 471 (477)
T PRK15014 431 FTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIA 471 (477)
T ss_pred ccCCCccCccceEEECCCCCCCcccceecccHHHHHHHHHH
Confidence 432 23459999997642 3345667777776653
No 43
>TIGR03356 BGL beta-galactosidase.
Probab=66.10 E-value=13 Score=39.15 Aligned_cols=78 Identities=12% Similarity=0.090 Sum_probs=43.7
Q ss_pred HHHHhcCc-eeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhcc--CchhhhhhhhhhcCCCCCCC
Q psy11632 308 ERKYLFKL-YILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLNH--GLVAWLEWNLALNTQGGTNW 381 (450)
Q Consensus 308 ~~~~~~~k-~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~~--~~~a~~~W~~~~~~~gg~~~ 381 (450)
.+.++|++ +|++||.+.+..+ .. + .+. ..+=.+...+...| ...+.. ++-+|++|.++.+ ..|
T Consensus 330 ~~~~rY~~ppi~ITENG~~~~d----~~-~-~g~-~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn----~ew 398 (427)
T TIGR03356 330 RLKEDYPGPPIYITENGAAFDD----EV-T-DGE-VHDPERIAYLRDHLAALARAIEEGVDVRGYFVWSLLDN----FEW 398 (427)
T ss_pred HHHHhcCCCCEEEeCCCCCcCC----CC-c-CCC-cCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecccccc----cch
Confidence 55667775 7999998765211 00 0 000 11112333344443 444543 4789999999754 335
Q ss_pred CC--CccCccEEEeCCC
Q psy11632 382 KN--NFLDAPIIVNAAK 396 (450)
Q Consensus 382 ~~--~~~~~li~~d~~~ 396 (450)
.. ....||+.||.++
T Consensus 399 ~~gy~~rfGl~~VD~~~ 415 (427)
T TIGR03356 399 AEGYSKRFGLVHVDYET 415 (427)
T ss_pred hcccccccceEEECCCC
Confidence 32 2345899999875
No 44
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B.
Probab=66.00 E-value=18 Score=28.90 Aligned_cols=74 Identities=15% Similarity=0.044 Sum_probs=38.0
Q ss_pred ceeeeccCCcCCCCCCCCCCCCCCCCCC--CccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCC--Chhhh-HHhh
Q psy11632 204 SFWALTTGNEPINGDLPSFLPFVPKFNS--MGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRF--VLPWW-LEQV 278 (450)
Q Consensus 204 ~i~~is~qNEP~~~~~~~~~~~~~~~~~--~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~--~~~~~-~~~v 278 (450)
.|-+.-+.|||+..+.. .+|. -....+....+++ .....+++.+.+ ..|.++=.... .+... ...+
T Consensus 10 ~Il~Wdl~NE~p~~~~~-------~~~~~~~~~~~~~~~~~l~-~~~~~iR~~dP~-~pvt~g~~~~~~~~~~~~~~~~~ 80 (88)
T PF12876_consen 10 RILAWDLWNEPPNNWAD-------GYPAEWGDPKAEAYAEWLK-EAFRWIRAVDPS-QPVTSGFWGGDWEDLEQLQAENL 80 (88)
T ss_dssp GEEEEESSTTTT-TT-T-------T-TT-TT-TTSHHHHHHHH-HHHHHHHTT-TT-S-EE--B--S-TTHHHHS--TT-
T ss_pred CEEEEEeecCCCCcccc-------cccccccchhHHHHHHHHH-HHHHHHHHhCCC-CcEEeecccCCHHHHHHhchhcC
Confidence 46678899994333211 1222 2235678888888 678899998875 55655432211 01111 2345
Q ss_pred eeeEeeec
Q psy11632 279 CNIGLRMF 286 (450)
Q Consensus 279 ~~ia~H~Y 286 (450)
..+.+|.|
T Consensus 81 DvisfH~Y 88 (88)
T PF12876_consen 81 DVISFHPY 88 (88)
T ss_dssp SSEEB-EE
T ss_pred CEEeeecC
Confidence 58999998
No 45
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=65.75 E-value=37 Score=32.73 Aligned_cols=84 Identities=10% Similarity=-0.008 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeE
Q psy11632 181 TQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATK 260 (450)
Q Consensus 181 ~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~k 260 (450)
++..+.|++-++++++.|.=.||+|+.=.| .. +.+....|++ .|+.+|++.|+. .-
T Consensus 81 ~~~r~~fi~~lv~~~~~~~~DGIdiDwE~~--------------------~~--~~~~~~~fv~-~Lr~~l~~~~~~-lt 136 (253)
T cd06545 81 PAKRKALVDKIINYVVSYNLDGIDVDLEGP--------------------DV--TFGDYLVFIR-ALYAALKKEGKL-LT 136 (253)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceeEEeecc--------------------Cc--cHhHHHHHHH-HHHHHHhhcCcE-EE
Confidence 578889999999999888777999974211 11 1466788998 799999987642 22
Q ss_pred EEEecCC-CCChhhhHHhheeeEeeecCC
Q psy11632 261 ILAIDDQ-RFVLPWWLEQVCNIGLRMFQD 288 (450)
Q Consensus 261 I~~~d~~-~~~~~~~~~~v~~ia~H~Y~~ 288 (450)
+.++-.. ....+...+.+.-+.+.+|+.
T Consensus 137 ~av~~~~~~~~~~~~~~~vD~i~vMtYD~ 165 (253)
T cd06545 137 AAVSSWNGGAVSDSTLAYFDFINIMSYDA 165 (253)
T ss_pred EEccCcccccccHHHHhhCCEEEEEcCcC
Confidence 2222111 111123334455666666663
No 46
>cd06830 PLPDE_III_ADC Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase. This subfamily includes plants and biosynthetic prokaryotic arginine decarboxylases (ADC, EC 4.1.1.19). ADC is involved in the biosynthesis of putrescine, which is the precursor of aliphatic polyamines in many organisms. It catalyzes the decarboxylation of L-arginine to agmatine, which is then hydrolyzed to putrescine by agmatinase. ADC is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC), which are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. Homodimer formation and the presence of both PLP and Mg2+ cofactors may be required for catalytic activity. Prokaryotic ADCs (biodegradative), which are fold type I PLP-dependent enzymes, are not included in this family.
Probab=65.14 E-value=92 Score=32.41 Aligned_cols=116 Identities=12% Similarity=0.074 Sum_probs=75.9
Q ss_pred CCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCcee
Q psy11632 127 EKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFW 206 (450)
Q Consensus 127 ~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~ 206 (450)
+.|-++.++ ...+++.+++.+.+ +++.+.- .-.|.+.+..+.|.+....+.++++.+++.|+++.
T Consensus 162 sKFGi~~~~---~~~~~~~~~~~~~~-l~l~GlH-----------~H~GSq~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 226 (409)
T cd06830 162 SKFGLTASE---ILEVVEKLKEAGML-DRLKLLH-----------FHIGSQITDIRRIKSALREAARIYAELRKLGANLR 226 (409)
T ss_pred CCCCCCHHH---HHHHHHHHHhcCcC-CeEEEEE-----------EecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 567776533 56778888877655 6666541 11233456678888888888899988888888877
Q ss_pred eeccCCcCCCCCCCCCCCCCCCCC--------CCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCC
Q psy11632 207 ALTTGNEPINGDLPSFLPFVPKFN--------SMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDDQRF 269 (450)
Q Consensus 207 ~is~qNEP~~~~~~~~~~~~~~~~--------~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~ 269 (450)
.|.+. +++..+|. ....+.+++++-|++.|...+++.++.+++|++ |.-++
T Consensus 227 ~iDiG-----------GGf~v~y~~~~~~~~~~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~l~~-EpGR~ 285 (409)
T cd06830 227 YLDIG-----------GGLGVDYDGSRSSSDSSFNYSLEEYANDIVKTVKEICDEAGVPHPTIVT-ESGRA 285 (409)
T ss_pred EEEcC-----------CCcccCCCCCcCcccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEE-ecCHH
Confidence 76542 12222332 123567888888887788777777776577775 76543
No 47
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=62.49 E-value=7.9 Score=40.95 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=54.1
Q ss_pred HHHHHHhcC-ceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhcc--CchhhhhhhhhhcCCCCC
Q psy11632 306 VVERKYLFK-LYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLNH--GLVAWLEWNLALNTQGGT 379 (450)
Q Consensus 306 ~~~~~~~~~-k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~~--~~~a~~~W~~~~~~~gg~ 379 (450)
+..+++.|+ ++|++||.+.+..+ ..+. ....+-.+...+...| +..+.. ++.+|++|.++.+-
T Consensus 346 L~~l~~~Y~~~pI~ITENG~~~~~-----~~~~--~~v~D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl~Dn~---- 414 (455)
T PF00232_consen 346 LRYLKDRYGNPPIYITENGIGDPD-----EVDD--GKVDDDYRIDYLQDHLNQVLKAIEDGVNVRGYFAWSLLDNF---- 414 (455)
T ss_dssp HHHHHHHHTSSEEEEEEE---EET-----TCTT--SHBSHHHHHHHHHHHHHHHHHHHHTT-EEEEEEEETSB-------
T ss_pred hhhhccccCCCcEEEecccccccc-----cccc--cCcCcHHHHHHHHHHHHHHHhhhccCCCeeeEeeecccccc----
Confidence 445667775 99999999766211 0000 0011223444444443 445543 47899999997543
Q ss_pred CCCC--CccCccEEEe-CCCCEEEEchhhHhhhhhc
Q psy11632 380 NWKN--NFLDAPIIVN-AAKDEFYKQPMFYAIGHFS 412 (450)
Q Consensus 380 ~~~~--~~~~~li~~d-~~~g~~~~~~~yy~~g~fs 412 (450)
.|.. ....||+.|| .++.+=++.+.++-++++.
T Consensus 415 Ew~~Gy~~rfGl~~VD~~~~~~R~pK~S~~~y~~~i 450 (455)
T PF00232_consen 415 EWAEGYKKRFGLVYVDFFDTLKRTPKKSAYWYKDFI 450 (455)
T ss_dssp BGGGGGGSE--SEEEETTTTTEEEEBHHHHHHHHHH
T ss_pred ccccCccCccCceEEcCCCCcCeeeccHHHHHHHHH
Confidence 3532 2345899999 8778877888888877664
No 48
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster. The IDGF's have an eight-stranded alpha/beta barrel fold and are related to the glycosyl hydrolase family 18 (GH18) chitinases, but they have an amino acid substitution known to abolish chitinase catalytic activity. IDGFs may have evolved from chitinases to gain new functions as growth factors, interacting with cell surface glycoproteins involved in growth-promoting processes.
Probab=59.85 E-value=1.2e+02 Score=31.57 Aligned_cols=141 Identities=16% Similarity=0.100 Sum_probs=72.6
Q ss_pred HHHHHHHHHhcCCCeEEEEee--cCC--CcccccCCCCCCCCcc-chHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcC
Q psy11632 140 IPLIQQANRLRGEPLRLVGSA--WSA--PAWMKTNNALTGRGEL-KTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEP 214 (450)
Q Consensus 140 ~~~lk~A~~~~~~~~~i~~s~--WSp--P~wMk~n~~~~g~G~L-~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP 214 (450)
+.-+...|+.+|+ +|++.|. |+- ..+ .+.... --+ .++..+.|++=++++++.|.=.||+|+.=-|..++
T Consensus 62 ~~~~~~lk~~~p~-lKvllSiGGw~~~~~~~--~s~~fs--~~~~~~~~R~~Fi~siv~~l~~~~fDGidiDWEyP~~~~ 136 (413)
T cd02873 62 YRAITSLKRKYPH-LKVLLSVGGDRDTDEEG--ENEKYL--LLLESSESRNAFINSAHSLLKTYGFDGLDLAWQFPKNKP 136 (413)
T ss_pred HHHHHHHHhhCCC-CeEEEeecCCCCCCCcc--cchhhH--HHhCCHHHHHHHHHHHHHHHHHcCCCCeEeeeeCCCCcc
Confidence 4455566777786 9999985 210 000 000000 011 24678889999999998887779999866665543
Q ss_pred CCCCC--CCCCC-CCCCC-------CCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecC----CCCChhhhHHhhee
Q psy11632 215 INGDL--PSFLP-FVPKF-------NSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDD----QRFVLPWWLEQVCN 280 (450)
Q Consensus 215 ~~~~~--~~~~~-~~~~~-------~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~----~~~~~~~~~~~v~~ 280 (450)
..... ...|. +..-+ +.+.-..+....|++ .|+.+|++.++. .-|.++-. ..++.+...+.|..
T Consensus 137 ~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~nf~~Ll~-elr~~l~~~~~~-ls~av~~~~~~~~~~d~~~l~~~vD~ 214 (413)
T cd02873 137 KKVRGTFGSAWHSFKKLFTGDSVVDEKAAEHKEQFTALVR-ELKNALRPDGLL-LTLTVLPHVNSTWYFDVPAIANNVDF 214 (413)
T ss_pred cccccccchhhhhhhcccccccccCCCChhHHHHHHHHHH-HHHHHhcccCcE-EEEEecCCchhccccCHHHHhhcCCE
Confidence 21000 00000 00000 112223455677777 799999887753 33333211 12344444555555
Q ss_pred eEeeecC
Q psy11632 281 IGLRMFQ 287 (450)
Q Consensus 281 ia~H~Y~ 287 (450)
+.+-+|+
T Consensus 215 inlMtYD 221 (413)
T cd02873 215 VNLATFD 221 (413)
T ss_pred EEEEEec
Confidence 5544444
No 49
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl hydrolase family 18 (GH18) domain but lacks a chitin-binding domain. The catalytic amino acids of the GH18 domain are not conserved in SI-CLP, similar to the chitolectins YKL-39, YKL-40, and YM1/2. Human SI-CLP is sorted to late endosomes and secretory lysosomes in alternatively activated macrophages.
Probab=59.28 E-value=47 Score=33.18 Aligned_cols=95 Identities=12% Similarity=0.114 Sum_probs=53.3
Q ss_pred HHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCC
Q psy11632 141 PLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLP 220 (450)
Q Consensus 141 ~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~ 220 (450)
..++.+++.+++ +|++.+.- ==.|-. .... .---.++..+.|++=++++++.+.=.||+|+.. ..|...
T Consensus 55 ~~~~~lk~~~~~-lkvlp~i~-~gg~~~--~~f~-~~~~~~~~R~~fi~s~~~~~~~~~~DGidiD~w---e~p~~~--- 123 (318)
T cd02876 55 GWIEEVRKANKN-IKILPRVL-FEGWSY--QDLQ-SLLNDEQEREKLIKLLVTTAKKNHFDGIVLEVW---SQLAAY--- 123 (318)
T ss_pred HHHHHHHhhCCC-cEEEeEEE-ECCCCH--HHHH-HHHcCHHHHHHHHHHHHHHHHHcCCCcEEEech---hhhccc---
Confidence 356677777776 99984310 001110 0000 001124678889999999988887678888621 112110
Q ss_pred CCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCC
Q psy11632 221 SFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHN 257 (450)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~ 257 (450)
+..=.-+....|++ .|+.+|++.|+.
T Consensus 124 ----------~~~~d~~~~~~~l~-el~~~l~~~~~~ 149 (318)
T cd02876 124 ----------GVPDKRKELIQLVI-HLGETLHSANLK 149 (318)
T ss_pred ----------CCHHHHHHHHHHHH-HHHHHHhhcCCE
Confidence 01112355677888 799999987753
No 50
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism]
Probab=57.77 E-value=2.2e+02 Score=28.86 Aligned_cols=234 Identities=17% Similarity=0.188 Sum_probs=114.0
Q ss_pred CCCCCccccccccHHHHHHH-HHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCce
Q psy11632 127 EKFNLTTEDFQYKIPLIQQA-NRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSF 205 (450)
Q Consensus 127 ~~f~~~~~d~~~~~~~lk~A-~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i 205 (450)
+.|+++..| .+..|.++- +.+.. +--|+-+ .-|.||+.-. --+....+..-+|+..++.+|+.. +
T Consensus 77 G~f~Fe~AD--~ia~FAr~h~m~lhG-HtLvW~~--q~P~W~~~~e------~~~~~~~~~~e~hI~tV~~rYkg~---~ 142 (345)
T COG3693 77 GRFNFEAAD--AIANFARKHNMPLHG-HTLVWHS--QVPDWLFGDE------LSKEALAKMVEEHIKTVVGRYKGS---V 142 (345)
T ss_pred CccCccchH--HHHHHHHHcCCeecc-ceeeecc--cCCchhhccc------cChHHHHHHHHHHHHHHHHhccCc---e
Confidence 577787756 234444331 11211 2234444 4667885432 112356666778999999999865 6
Q ss_pred eeeccCCcCCCCCCCCCCCCCCCCCCCccCH-HHHHHHHHHhhHHHHhcCCCCCeEEEEecCCCCChhh---hHH-----
Q psy11632 206 WALTTGNEPINGDLPSFLPFVPKFNSMGWHP-KSVATWIANNLGPTLRSSQHNATKILAIDDQRFVLPW---WLE----- 276 (450)
Q Consensus 206 ~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~-~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~~~~~~~~---~~~----- 276 (450)
...-+.|||--.. + ..-+..|.. ----+.|+.+..-+ +++.. +.|++.-|=.-...+. +..
T Consensus 143 ~sWDVVNE~vdd~-g-------~~R~s~w~~~~~gpd~I~~aF~~A-readP-~AkL~~NDY~ie~~~~kr~~~~nlI~~ 212 (345)
T COG3693 143 ASWDVVNEAVDDQ-G-------SLRRSAWYDGGTGPDYIKLAFHIA-READP-DAKLVINDYSIEGNPAKRNYVLNLIEE 212 (345)
T ss_pred eEEEecccccCCC-c-------hhhhhhhhccCCccHHHHHHHHHH-HhhCC-CceEEeecccccCChHHHHHHHHHHHH
Confidence 7788899997542 1 222223321 11112233222211 22344 4888887642111111 111
Q ss_pred ------hheeeEeee-cCCCCCChhhhccccCCCchHHHHHHhcCceeEEeccccCCCCCCCCCCCccccccCCChHHHH
Q psy11632 277 ------QVCNIGLRM-FQDKLPIPEKILRKDIPSMNVVERKYLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAE 349 (450)
Q Consensus 277 ------~v~~ia~H~-Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~ 349 (450)
+|.||++.| ..++....++... .+..+.+. |.++.+||..... +.|-. +.=...+
T Consensus 213 LkekG~pIDgiG~QsH~~~~~~~~~~~~~------a~~~~~k~-Gl~i~VTELD~~~-----~~P~~------~~p~~~~ 274 (345)
T COG3693 213 LKEKGAPIDGIGIQSHFSGDGPSIEKMRA------ALLKFSKL-GLPIYVTELDMSD-----YTPDS------GAPRLYL 274 (345)
T ss_pred HHHCCCCccceeeeeeecCCCCCHHHHHH------HHHHHhhc-CCCceEEEeeeec-----cCCCC------ccHHHHH
Confidence 233555433 2222222211211 11122222 9999999987653 11221 1211222
Q ss_pred HHH----H--HHHHHhccCchhhhhhhhhhcCCCCCCCCCC-c----cCccEEEeCCCCEEEEchhhHhhh
Q psy11632 350 QYI----S--DIIENLNHGLVAWLEWNLALNTQGGTNWKNN-F----LDAPIIVNAAKDEFYKQPMFYAIG 409 (450)
Q Consensus 350 ~~a----~--~i~~~l~~~~~a~~~W~~~~~~~gg~~~~~~-~----~~~li~~d~~~g~~~~~~~yy~~g 409 (450)
.-+ + .+.....+++++.+.|-+.... +|... + .+.+..+|. .+.+.|.|+++.
T Consensus 275 ~~~~~~~~~f~~~~~~~~~v~~it~WGi~D~y----SWl~g~~~~~~~~rPl~~D~---n~~pKPa~~aI~ 338 (345)
T COG3693 275 QKAASRAKAFLLLLLNPNQVKAITFWGITDRY----SWLRGRDPRRDGLRPLLFDD---NYQPKPAYKAIA 338 (345)
T ss_pred HHHHHHHHHHHHHHhcccccceEEEeeeccCc----ccccCCccCcCCCCCcccCC---CCCcchHHHHHH
Confidence 221 1 1222223568999999986443 34211 0 124667775 456788999998
No 51
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases. The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
Probab=57.38 E-value=61 Score=32.88 Aligned_cols=91 Identities=12% Similarity=0.133 Sum_probs=54.3
Q ss_pred cHHHHHHHHHhcCCCeEEEEee--cCCCcccccCCCCCCCCcc-chHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCC
Q psy11632 139 KIPLIQQANRLRGEPLRLVGSA--WSAPAWMKTNNALTGRGEL-KTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPI 215 (450)
Q Consensus 139 ~~~~lk~A~~~~~~~~~i~~s~--WSpP~wMk~n~~~~g~G~L-~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~ 215 (450)
.+.-+.+.++.+|+ +|++.|. |+. ...... --+ .++..+.|++=++++++.+.=.||+|+.-.|...
T Consensus 57 ~~~~~~~lk~~~p~-lkvlisiGG~~~-----~~~~f~--~~~~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~p~~~-- 126 (362)
T cd02872 57 LYERFNALKEKNPN-LKTLLAIGGWNF-----GSAKFS--AMAASPENRKTFIKSAIAFLRKYGFDGLDLDWEYPGQR-- 126 (362)
T ss_pred HHHHHHHHHhhCCC-ceEEEEEcCCCC-----CcchhH--HHhCCHHHHHHHHHHHHHHHHHcCCCCeeeeeeccccC--
Confidence 34455666777787 9999874 210 000000 011 2367788999999998888767998874333210
Q ss_pred CCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcC
Q psy11632 216 NGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSS 254 (450)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~ 254 (450)
.+-.-+.+....||+ .|+.+|++.
T Consensus 127 --------------~~~~~d~~~~~~ll~-~lr~~l~~~ 150 (362)
T cd02872 127 --------------GGPPEDKENFVTLLK-ELREAFEPE 150 (362)
T ss_pred --------------CCCHHHHHHHHHHHH-HHHHHHHhh
Confidence 000112455777888 799999987
No 52
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=57.26 E-value=5 Score=41.29 Aligned_cols=145 Identities=12% Similarity=0.097 Sum_probs=59.4
Q ss_pred CCCChhHHHHHhhhccCcEEEEecCCCceEEeccCCCCCCCcceeEEEccCCccceEEEEEEEecCCCCCChhHHHHHHH
Q psy11632 1 MGWSPFALAKRVGDSLGPTIKTSNLATKIFMLDDQKVPLPWFITLMTADNSKVESYIDGVGIHWYWDQFIPVTVVDTVHK 80 (450)
Q Consensus 1 ~~~t~~~~~~fi~~~lgp~l~~~~~~~~~~~~d~~~~~~~~~~~~i~v~~~~~~Q~i~GfG~~~~~~~~~~~~~~~~~~~ 80 (450)
|-|++++++.+|+ .|.+.|.+.+++++|.+.+-.. ..++-.. +- ....|...++
T Consensus 195 ~~~~~~e~a~vI~-~L~~~L~~~GL~t~I~~~Ea~~-----------------~~~l~~~--~~------~~~~r~~~i~ 248 (384)
T PF14587_consen 195 CHFTNEEQADVIR-ALDKALKKRGLSTKISACEAGD-----------------WEYLYKT--DK------NDWGRGNQIE 248 (384)
T ss_dssp ----HHHHHHHHH-HHHHHHHHHT-S-EEEEEEESS-----------------GGGGS-----S-------TTS---HHH
T ss_pred CCCCHHHHHHHHH-HHHHHHHhcCCCceEEecchhh-----------------HHHHhhc--cC------CchhhhhhHH
Confidence 7799999999988 9999999999988766543322 1111100 00 1123445567
Q ss_pred HccchhhccccccccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCc-cccccccHHHH-HHHHHhcCCCeEEEE
Q psy11632 81 KYPRLLLINTEASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLT-TEDFQYKIPLI-QQANRLRGEPLRLVG 158 (450)
Q Consensus 81 ~lf~~~~~~Te~~~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~-~~d~~~~~~~l-k~A~~~~~~~~~i~~ 158 (450)
.+|+.. +..-.|-=-++-|+.-|- +| |+-. .+....++..| +++++++++ ++++.
T Consensus 249 ~ff~~~---s~~yi~~l~~v~~~i~~H--------sY-----------wt~~~~~~l~~~R~~~~~~~~~~~~~-~~~wq 305 (384)
T PF14587_consen 249 AFFNPD---SSTYIGDLPNVPNIISGH--------SY-----------WTDSPWDDLRDIRKQLADKLDKYSPG-LKYWQ 305 (384)
T ss_dssp HHHSTT---STT--TT-TTEEEEEEE----------T-----------T-SSSHHHHHHHHHHHHHHHHTTSS---EEEE
T ss_pred hhcCCC---chhhhhccccchhheeec--------cc-----------ccCCCHHHHHHHHHHHHHHHHhhCcC-Cceee
Confidence 777311 000011111222222221 22 1111 11112233334 345567676 99999
Q ss_pred eecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHH
Q psy11632 159 SAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDF 197 (450)
Q Consensus 159 s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~ 197 (450)
|-||. |-.+.....+|--..+..=+.|.|++++|-+
T Consensus 306 tE~~i---l~~~~~~~~~~g~~~~~~m~~aLy~arviH~ 341 (384)
T PF14587_consen 306 TEYCI---LGDNYEIIEGGGYDRDLGMDTALYVARVIHN 341 (384)
T ss_dssp ----S-------TTT-SSS-HHHHHHH--HHHHHHHHHH
T ss_pred eeeee---ccCCcccccCCCcccchhHHHHHHHHHHHHh
Confidence 99987 5444333322222235556789999999964
No 53
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=53.90 E-value=21 Score=38.04 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=56.1
Q ss_pred HHHHHHhcCc--eeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhcc--CchhhhhhhhhhcCCCC
Q psy11632 306 VVERKYLFKL--YILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLNH--GLVAWLEWNLALNTQGG 378 (450)
Q Consensus 306 ~~~~~~~~~k--~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~~--~~~a~~~W~~~~~~~gg 378 (450)
+..+++.|++ +|++||.+.+..+ ..+..+ ...+-.|...+...| ...+.. ++.+|++|.++.+-
T Consensus 358 l~~~~~~Y~~~~pi~ITENG~~~~d-----~~~~~~-~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dnf--- 428 (469)
T PRK13511 358 LMRIKKDYPNYKKIYITENGLGYKD-----EFVDGK-TVDDDKRIDYVKQHLEVISDAISDGANVKGYFIWSLMDVF--- 428 (469)
T ss_pred HHHHHHHcCCCCCEEEecCCcCCCC-----CcCCCC-ccCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccccc---
Confidence 4456667754 7999998765211 000000 012233544454444 445543 47899999998553
Q ss_pred CCCCC--CccCccEEEeCCCCEEEEchhhHhhhhhc
Q psy11632 379 TNWKN--NFLDAPIIVNAAKDEFYKQPMFYAIGHFS 412 (450)
Q Consensus 379 ~~~~~--~~~~~li~~d~~~g~~~~~~~yy~~g~fs 412 (450)
.|.. ....||+.||.++.+=++.+.++-++++.
T Consensus 429 -EW~~Gy~~RfGl~~VD~~~~~R~pK~S~~wy~~~i 463 (469)
T PRK13511 429 -SWSNGYEKRYGLFYVDFETQERYPKKSAYWYKKLA 463 (469)
T ss_pred -chhcCccCccceEEECCCcCccccccHHHHHHHHH
Confidence 3532 23459999999876555566677666554
No 54
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=53.20 E-value=54 Score=32.79 Aligned_cols=95 Identities=11% Similarity=0.134 Sum_probs=55.4
Q ss_pred cHHHHHHHHHhcCCCeEEEEee--cCCCcccccCCCCCCCCcc--chHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcC
Q psy11632 139 KIPLIQQANRLRGEPLRLVGSA--WSAPAWMKTNNALTGRGEL--KTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEP 214 (450)
Q Consensus 139 ~~~~lk~A~~~~~~~~~i~~s~--WSpP~wMk~n~~~~g~G~L--~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP 214 (450)
.+.-++..++.+++ +|++.+. |+. +... -.+ .++..+.|++-++++++.+.=.||+|+.--|.+..
T Consensus 71 ~~~~~~~lk~~~p~-lkvl~siGG~~~------s~~f---~~~~~~~~~r~~Fi~siv~~l~~~~fDGidiDwE~p~~~~ 140 (322)
T cd06548 71 NFGQLRKLKQKNPH-LKILLSIGGWTW------SGGF---SDAAATEASRAKFADSAVDFIRKYGFDGIDIDWEYPGSGG 140 (322)
T ss_pred HHHHHHHHHHhCCC-CEEEEEEeCCCC------CCCc---hhHhCCHHHHHHHHHHHHHHHHhcCCCeEEECCcCCCCCC
Confidence 34445566677776 8999874 211 1111 112 24678889999999998877678888632222110
Q ss_pred CCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCC
Q psy11632 215 INGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQ 255 (450)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~g 255 (450)
..+ -.+-.-..+....||+ .|+.+|++.+
T Consensus 141 ~~~-----------~~~~~~d~~~~~~ll~-~Lr~~l~~~~ 169 (322)
T cd06548 141 APG-----------NVARPEDKENFTLLLK-ELREALDALG 169 (322)
T ss_pred CCC-----------CCCChhHHHHHHHHHH-HHHHHHHHhh
Confidence 000 0000123466777888 7999998864
No 55
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=51.68 E-value=22 Score=37.76 Aligned_cols=95 Identities=13% Similarity=0.107 Sum_probs=54.8
Q ss_pred HHHHHHhcCc--eeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhcc--CchhhhhhhhhhcCCCC
Q psy11632 306 VVERKYLFKL--YILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLNH--GLVAWLEWNLALNTQGG 378 (450)
Q Consensus 306 ~~~~~~~~~k--~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~~--~~~a~~~W~~~~~~~gg 378 (450)
+..+++.|++ +|++||.+.+..+ .. + .+. ..+-.|...+...| ...+.. ++.+|+.|.++.+-
T Consensus 357 L~~~~~~Y~~~ppi~ItENG~~~~d----~~-~-~g~-i~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn~--- 426 (467)
T TIGR01233 357 IMRVKNDYPNYKKIYITENGLGYKD----EF-V-DNT-VYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVF--- 426 (467)
T ss_pred HHHHHHHcCCCCCEEEeCCCCCCCC----CC-C-CCc-cCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh---
Confidence 3456677765 6999998765211 00 0 010 11223444444444 444543 47899999998553
Q ss_pred CCCCC--CccCccEEEeCCCCEEEEchhhHhhhhh
Q psy11632 379 TNWKN--NFLDAPIIVNAAKDEFYKQPMFYAIGHF 411 (450)
Q Consensus 379 ~~~~~--~~~~~li~~d~~~g~~~~~~~yy~~g~f 411 (450)
.|.. ....||+.||.++.+=++.+.++-++.+
T Consensus 427 -Ew~~Gy~~RfGLv~VD~~t~~R~~K~S~~wy~~i 460 (467)
T TIGR01233 427 -SWSNGYEKRYGLFYVDFDTQERYPKKSAHWYKKL 460 (467)
T ss_pred -chhccccCccceEEECCCCCccccccHHHHHHHH
Confidence 3432 2346999999987655556666665554
No 56
>PLN03059 beta-galactosidase; Provisional
Probab=50.71 E-value=1.2e+02 Score=34.82 Aligned_cols=118 Identities=9% Similarity=0.099 Sum_probs=72.8
Q ss_pred CCCCCccccccccHHHHHHHHHhcCCCeEEEEe-------ecC---CCcccccCCCCCCCCccchHHHHHHHHHHHHHHH
Q psy11632 127 EKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGS-------AWS---APAWMKTNNALTGRGELKTQYYQTWAQYLIMFLD 196 (450)
Q Consensus 127 ~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s-------~WS---pP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~ 196 (450)
+.|+++- ...+..||+.|++.| |.+++= -|. =|.|+.....+. --+-.+.+.++-..|+.+.+.
T Consensus 90 G~~dF~G--~~DL~~Fl~la~e~G---LyvilRpGPYIcAEw~~GGlP~WL~~~~~i~-~Rs~d~~fl~~v~~~~~~l~~ 163 (840)
T PLN03059 90 GNYYFED--RYDLVKFIKVVQAAG---LYVHLRIGPYICAEWNFGGFPVWLKYVPGIE-FRTDNGPFKAAMQKFTEKIVD 163 (840)
T ss_pred Ceeeccc--hHHHHHHHHHHHHcC---CEEEecCCcceeeeecCCCCchhhhcCCCcc-cccCCHHHHHHHHHHHHHHHH
Confidence 4555532 345788999999885 444443 254 478886433221 112334566666677777777
Q ss_pred HHH------HcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecC
Q psy11632 197 FYK------REQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDD 266 (450)
Q Consensus 197 ~~~------~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~ 266 (450)
.++ ++|=||-.+-+-|| +.. ++ +...... ...++ .|+..++++|+. +-++..|.
T Consensus 164 ~l~~~~l~~~~GGPIImvQIENE--YGs----------~~-~~~~~~d-~~Yl~-~l~~~~~~~Gi~-VPl~t~dg 223 (840)
T PLN03059 164 MMKSEKLFEPQGGPIILSQIENE--YGP----------VE-WEIGAPG-KAYTK-WAADMAVKLGTG-VPWVMCKQ 223 (840)
T ss_pred HHhhcceeecCCCcEEEEEeccc--ccc----------ee-cccCcch-HHHHH-HHHHHHHHcCCC-cceEECCC
Confidence 664 46779999999999 431 11 1111111 34555 688888889996 88888884
No 57
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=50.12 E-value=2.4e+02 Score=26.95 Aligned_cols=92 Identities=11% Similarity=0.024 Sum_probs=51.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCC-ccCHHHHHHHHHHhhHHHHhcCCCCC
Q psy11632 180 KTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSM-GWHPKSVATWIANNLGPTLRSSQHNA 258 (450)
Q Consensus 180 ~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~-~~~~~~~~~fi~~~L~~~l~~~gl~~ 258 (450)
.++..+.||+.++++|+.|.=.||+|+.=.+...+ .++ ..+.+-...||+ .|+..|...+.
T Consensus 85 ~~~~~~~fa~~l~~~v~~yglDGiDiD~E~~~~~~---------------~~~~~~~~~~~~~lv~-~Lr~~~~~~~k-- 146 (255)
T cd06542 85 SDAAAKAYAKAIVDTVDKYGLDGVDFDDEYSGYGK---------------NGTSQPSNEAFVRLIK-ELRKYMGPTDK-- 146 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceEEeeeecccCC---------------CCCCcchHHHHHHHHH-HHHHHhCcCCc--
Confidence 34678999999999998876678888743222111 011 134566778887 68888865331
Q ss_pred eEEEEecCCCC--ChhhhHHhheeeEeeecCCC
Q psy11632 259 TKILAIDDQRF--VLPWWLEQVCNIGLRMFQDK 289 (450)
Q Consensus 259 ~kI~~~d~~~~--~~~~~~~~v~~ia~H~Y~~~ 289 (450)
.-.+....... ........+.-+..-.|+..
T Consensus 147 llt~~~~~~~~~~~~~~~~~~vDyv~~~~y~~~ 179 (255)
T cd06542 147 LLTIDGYGQALSNDGEEVSPYVDYVIYQYYGSS 179 (255)
T ss_pred EEEEEecCCchhcCHHHHHHhCCEEEeeccCCC
Confidence 22222222111 12233344445666677654
No 58
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism]
Probab=48.71 E-value=45 Score=34.77 Aligned_cols=107 Identities=16% Similarity=0.121 Sum_probs=56.2
Q ss_pred ccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCC----ccccc
Q psy11632 94 IGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAP----AWMKT 169 (450)
Q Consensus 94 ~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP----~wMk~ 169 (450)
.-.|++.+|++|+...+.. ... +.| .+ .... ..+.+-.++++|++++ +.|+...=.+| ...+.
T Consensus 83 k~~G~n~VRiPi~~~~~~~--~~~-~~p---~~---~~~~-~~~~ld~~I~~a~~~g---i~V~iD~H~~~~~~~~~~~s 149 (407)
T COG2730 83 KSAGFNAVRIPIGYWALQA--TDG-DNP---YL---IGLT-QLKILDEAINWAKKLG---IYVLIDLHGYPGGNNGHEHS 149 (407)
T ss_pred HHcCCcEEEcccchhhhhc--cCC-CCC---Ce---ecch-HHHHHHHHHHHHHhcC---eeEEEEecccCCCCCCcCcc
Confidence 4589999999999765511 110 111 11 1000 0113334577787774 56666532233 32222
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCC
Q psy11632 170 NNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPIN 216 (450)
Q Consensus 170 n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~ 216 (450)
.-... -+. +.++-++|..-+-.....|+. .-.+-.+.+.|||..
T Consensus 150 ~~~~~-~~~-~~~~~~~~~~~w~~ia~~f~~-~~~VIg~~~~NEP~~ 193 (407)
T COG2730 150 GYTSD-YKE-ENENVEATIDIWKFIANRFKN-YDTVIGFELINEPNG 193 (407)
T ss_pred ccccc-ccc-cchhHHHHHHHHHHHHHhccC-CCceeeeeeecCCcc
Confidence 11111 112 334555666666666667776 556666899999995
No 59
>PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases.; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A ....
Probab=48.71 E-value=13 Score=35.83 Aligned_cols=75 Identities=11% Similarity=0.136 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCC---ccCHHHHHHHHHHhhHHHHhcCCCCC
Q psy11632 182 QYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSM---GWHPKSVATWIANNLGPTLRSSQHNA 258 (450)
Q Consensus 182 ~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~---~~~~~~~~~fi~~~L~~~l~~~gl~~ 258 (450)
.|-++|.+||++-.-... .+-.|.+-++=|||+.-. .+.+-+ ..+.+|+.+-.. .+..++++...+
T Consensus 104 ~y~~ewV~~l~~~~g~a~-~~~gvk~y~lDNEP~LW~--------~TH~dVHP~~~t~~El~~r~i-~~AkaiK~~DP~- 172 (239)
T PF12891_consen 104 VYMDEWVNYLVNKYGNAS-TNGGVKYYSLDNEPDLWH--------STHRDVHPEPVTYDELRDRSI-EYAKAIKAADPD- 172 (239)
T ss_dssp EEHHHHHHHHHHHH--TT-STTS--EEEESS-GGGHH--------HHTTTT--S---HHHHHHHHH-HHHHHHHHH-TT-
T ss_pred hHHHHHHHHHHHHHhccc-cCCCceEEEecCchHhhc--------ccccccCCCCCCHHHHHHHHH-HHHHHHHhhCCC-
Confidence 577777777776644441 133455578889998311 011111 256667666655 589999998775
Q ss_pred eEEEEecCC
Q psy11632 259 TKILAIDDQ 267 (450)
Q Consensus 259 ~kI~~~d~~ 267 (450)
++|++|...
T Consensus 173 a~v~GP~~w 181 (239)
T PF12891_consen 173 AKVFGPVEW 181 (239)
T ss_dssp SEEEEEEE-
T ss_pred CeEeechhh
Confidence 999999864
No 60
>KOG2806|consensus
Probab=47.84 E-value=1e+02 Score=32.41 Aligned_cols=123 Identities=11% Similarity=0.040 Sum_probs=69.4
Q ss_pred cHHHHHHHHHhcCCCeEEEEee--cCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCC
Q psy11632 139 KIPLIQQANRLRGEPLRLVGSA--WSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPIN 216 (450)
Q Consensus 139 ~~~~lk~A~~~~~~~~~i~~s~--WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~ 216 (450)
...+.+.+++.+++ +|++.|. |. .|......=--.++..+.|-+=.+.|++.|.=.||++. |
T Consensus 108 f~~~~~~~k~~n~~-vK~llSIGG~~------~ns~~fs~~~s~~~~r~~FI~Sii~fl~~~~fDGvDL~---------W 171 (432)
T KOG2806|consen 108 FSSYNQTAKSSNPT-VKVMISIGGSH------GNSGLFSLVLSDRMIRAKFIESVVSFIKDYGFDGVDLA---------W 171 (432)
T ss_pred hHHHHHHHHhhCCC-ceEEEEecCCC------CCccchhhhhcChHHHHHHHHHHHHHHHHcCCCceeee---------e
Confidence 45566778888887 9999963 11 10000000011136777887878888877766788885 3
Q ss_pred CCCCCCCCCCCCCCC-CccCHHHHHHHHHHhhHHHHhcCCCCC--eE-EE-----Ee----cCCCCChhhhHHhheeeEe
Q psy11632 217 GDLPSFLPFVPKFNS-MGWHPKSVATWIANNLGPTLRSSQHNA--TK-IL-----AI----DDQRFVLPWWLEQVCNIGL 283 (450)
Q Consensus 217 ~~~~~~~~~~~~~~~-~~~~~~~~~~fi~~~L~~~l~~~gl~~--~k-I~-----~~----d~~~~~~~~~~~~v~~ia~ 283 (450)
.||+ -.-.-+....||+ .|+.+|++...+. .. ++ .+ .+..+++++-.+.+.-|++
T Consensus 172 -----------e~P~~~~~d~~~~~~~i~-elr~~~~~~~~~~~~~~~~l~~~v~~~~~~~~~~~ydi~~i~~~~DfiNi 239 (432)
T KOG2806|consen 172 -----------EWPLFTPSDQLEFSRFIQ-ELRSAFARETLKSPDTAKVLEAVVADSKQSAYSDGYDYENLSKYVDFINI 239 (432)
T ss_pred -----------ECCCCchhhHHHHHHHHH-HHHHHHHHHhhccCCccceeeeccccCccchhhccCCHHHHHhhCCeEEE
Confidence 3454 1123456677888 6899998764321 11 11 11 1122344455566666777
Q ss_pred eecCCC
Q psy11632 284 RMFQDK 289 (450)
Q Consensus 284 H~Y~~~ 289 (450)
|+|+..
T Consensus 240 ~syDf~ 245 (432)
T KOG2806|consen 240 MSYDYY 245 (432)
T ss_pred eccccc
Confidence 777643
No 61
>PF02156 Glyco_hydro_26: Glycosyl hydrolase family 26; InterPro: IPR022790 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 26 GH26 from CAZY encompasses mainly mannan endo-1,4-beta-mannosidases (3.2.1.78 from EC). Mannan endo-1,4-beta-mannosidase hydrolyses mannan and galactomannan, but displays little activity towards other plant cell wall polysaccharides []. The enzyme randomly hydrolyses 1,4-beta-D-linkages in mannans, galacto-mannans, glucomannans and galactoglucomannans. This entry also incoporates the enzyme Endogluconase H 3.2.1.4 from EC catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans. ; GO: 0008810 cellulase activity, 0016985 mannan endo-1,4-beta-mannosidase activity, 0006080 substituted mannan metabolic process; PDB: 2QHA_A 3CBW_A 2WHK_A 2VI0_A 2BVD_A 2BV9_A 2CIT_A 2V3G_A 2CIP_A 2X2Y_B ....
Probab=47.57 E-value=1.9e+02 Score=29.13 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCC-ccCHHHHHHHHHHhhHHHHhc-CCCCCeE
Q psy11632 183 YYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSM-GWHPKSVATWIANNLGPTLRS-SQHNATK 260 (450)
Q Consensus 183 ~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~-~~~~~~~~~fi~~~L~~~l~~-~gl~~~k 260 (450)
.+.+.-+-++++++.++++||||. +-|..|.+-.| + .|-.- +-+|++..++-+ .+-..|++ +|+.+ -
T Consensus 131 ~~~~~ld~iA~~l~~l~~~~vPVl-~Rp~HE~nG~W---f-----wWg~~~~~~~~~y~~lwr-~~~~~l~~~~g~~N-l 199 (311)
T PF02156_consen 131 AFKADLDRIADFLKQLKDAGVPVL-FRPFHEMNGGW---F-----WWGAKGHCTPEQYKALWR-HMVDYLRNVKGLHN-L 199 (311)
T ss_dssp HHHHHHHHHHHHHHHHHCTTS-EE-EEESTSTTSSS---S-----TTSTTSTCHHHHHHHHHH-HHHHHHHTTST-TS-E
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEE-EeehhhcCCCc---c-----ccCCCCCCCHHHHHHHHH-HHHHHHHhccCCce-E
Confidence 344444556666677777899986 88999998654 1 23211 245899998877 78888875 68864 5
Q ss_pred EEEecCCC--CChhh-hH--HhheeeEeeecCCCC
Q psy11632 261 ILAIDDQR--FVLPW-WL--EQVCNIGLRMFQDKL 290 (450)
Q Consensus 261 I~~~d~~~--~~~~~-~~--~~v~~ia~H~Y~~~~ 290 (450)
|.++-.+. ....+ || +.|..|++=.|..+.
T Consensus 200 iwvw~~~~~~~~~~~yYPGD~yVDivG~D~Y~~~~ 234 (311)
T PF02156_consen 200 IWVWSPNGSRDDAAEYYPGDDYVDIVGVDVYNDDP 234 (311)
T ss_dssp EEEE-EBTTSSCTCTT---TTT-SEEEEEEEESTC
T ss_pred EEEecCCCCCCCccccCCCCCeEEEEEEeCCCCCC
Confidence 55544332 12222 44 347788998998743
No 62
>smart00636 Glyco_18 Glycosyl hydrolase family 18.
Probab=45.35 E-value=1.2e+02 Score=30.34 Aligned_cols=86 Identities=12% Similarity=0.186 Sum_probs=52.2
Q ss_pred HHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccc-hHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCC
Q psy11632 142 LIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELK-TQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLP 220 (450)
Q Consensus 142 ~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~-~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~ 220 (450)
-|+..++.+++ +|++.+.-. |-. +.... --|. ++..+.|++-++++++.+.=.||+|+.=-|.+++
T Consensus 56 ~~~~l~~~~~~-~kvl~svgg---~~~-s~~f~--~~~~~~~~r~~fi~~i~~~~~~~~~DGidiDwE~~~~~~------ 122 (334)
T smart00636 56 QLKALKKKNPG-LKVLLSIGG---WTE-SDNFS--SMLSDPASRKKFIDSIVSFLKKYGFDGIDIDWEYPGARG------ 122 (334)
T ss_pred HHHHHHHhCCC-CEEEEEEeC---CCC-Ccchh--HHHCCHHHHHHHHHHHHHHHHHcCCCeEEECCcCCCCCc------
Confidence 35556666666 899886411 110 00000 1122 3678889999999999887678888632222211
Q ss_pred CCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcC
Q psy11632 221 SFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSS 254 (450)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~ 254 (450)
-..+....||+ .|+.+|.+.
T Consensus 123 -------------~d~~~~~~ll~-~lr~~l~~~ 142 (334)
T smart00636 123 -------------DDRENYTALLK-ELREALDKE 142 (334)
T ss_pred -------------cHHHHHHHHHH-HHHHHHHHh
Confidence 12456788888 799999864
No 63
>PLN02998 beta-glucosidase
Probab=45.34 E-value=37 Score=36.44 Aligned_cols=93 Identities=11% Similarity=0.009 Sum_probs=54.4
Q ss_pred HHHHHhcCc-eeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhcc--CchhhhhhhhhhcCCCCCC
Q psy11632 307 VERKYLFKL-YILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLNH--GLVAWLEWNLALNTQGGTN 380 (450)
Q Consensus 307 ~~~~~~~~k-~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~~--~~~a~~~W~~~~~~~gg~~ 380 (450)
..+++.|++ +|++||.+.+..+ ++ . ..+-.|...+...| ...+.. ++-+|+.|.++.+- .
T Consensus 384 ~~~~~rY~~ppI~ITENG~~~~~-------~g--~-v~D~~Ri~Yl~~hl~~~~kAi~dGv~V~GY~~WSl~Dnf----E 449 (497)
T PLN02998 384 LYVKETYGNPPVYILENGQMTPH-------SS--S-LVDTTRVKYLSSYIKAVLHSLRKGSDVKGYFQWSLMDVF----E 449 (497)
T ss_pred HHHHHHcCCCCEEEeCCCCccCC-------CC--c-ccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh----c
Confidence 355567766 6999998765210 00 0 11223444444444 444543 47899999998553 2
Q ss_pred CCCC--ccCccEEEeCCCC--EEEEchhhHhhhhhcc
Q psy11632 381 WKNN--FLDAPIIVNAAKD--EFYKQPMFYAIGHFSR 413 (450)
Q Consensus 381 ~~~~--~~~~li~~d~~~g--~~~~~~~yy~~g~fsr 413 (450)
|..+ ...||+.||.+++ +=++.+.++-++++.+
T Consensus 450 W~~Gy~~RfGLv~VD~~~~~~~R~pK~S~~wy~~ii~ 486 (497)
T PLN02998 450 LFGGYERSFGLLYVDFKDPSLKRSPKLSAHWYSSFLK 486 (497)
T ss_pred hhccccCccceEEECCCCCCcceecccHHHHHHHHHh
Confidence 4322 2459999998754 4445667777666544
No 64
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism]
Probab=44.49 E-value=2.2e+02 Score=29.90 Aligned_cols=109 Identities=10% Similarity=0.070 Sum_probs=70.6
Q ss_pred ccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCC
Q psy11632 136 FQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPI 215 (450)
Q Consensus 136 ~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~ 215 (450)
.++.+..|++-|+-.++ +|++.|. =.|=.+++=.. =.-..+..+.||.=.+++++.|.=-||+|+.==|-|+-+
T Consensus 110 ~~G~~~~L~~lk~~~~d-~k~l~SI---GGWs~S~~F~~--~aad~a~re~Fa~saVe~~r~~~FDGVDIDWEYP~~~~~ 183 (441)
T COG3325 110 LKGHFGALFDLKATYPD-LKTLISI---GGWSDSGGFSD--MAADDASRENFAKSAVEFMRTYGFDGVDIDWEYPGSGGD 183 (441)
T ss_pred ccchHHHHHHHhhhCCC-ceEEEee---cccccCCCcch--hhcCHHHHHHHHHHHHHHHHhcCCCceeeccccCCCCCC
Confidence 45667788888888786 8988875 11222221100 011246889999999999998885699998766666655
Q ss_pred CCCCCCCCCCCCCCCCCc-cCHHHHHHHHHHhhHHHHhcCCCCC---eEEEE
Q psy11632 216 NGDLPSFLPFVPKFNSMG-WHPKSVATWIANNLGPTLRSSQHNA---TKILA 263 (450)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~-~~~~~~~~fi~~~L~~~l~~~gl~~---~kI~~ 263 (450)
.. ++|. -..+-.+.++. .||.+|.+++..+ -+|.+
T Consensus 184 ~~------------~~~~~~d~~ny~~Ll~-eLR~~LD~a~~edgr~Y~LTi 222 (441)
T COG3325 184 AG------------NCGRPKDKANYVLLLQ-ELRKKLDKAGVEDGRHYQLTI 222 (441)
T ss_pred CC------------CCCCcccHHHHHHHHH-HHHHHHhhcccccCceEEEEE
Confidence 43 1222 23455556665 7999999999875 44444
No 65
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.
Probab=44.40 E-value=1.9e+02 Score=29.59 Aligned_cols=82 Identities=10% Similarity=0.092 Sum_probs=50.6
Q ss_pred HHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccc-hHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCC
Q psy11632 141 PLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELK-TQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDL 219 (450)
Q Consensus 141 ~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~-~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~ 219 (450)
.+++.|++.+ ++++.+. . .. .-.|. ++..+.|++=++++++.+.=.||+|+.=.|-.+.
T Consensus 68 ~~~~~A~~~~---v~v~~~~---------~--~~-~~~l~~~~~R~~fi~siv~~~~~~gfDGIdIDwE~p~~~~----- 127 (358)
T cd02875 68 ELLCYAHSKG---VRLVLKG---------D--VP-LEQISNPTYRTQWIQQKVELAKSQFMDGINIDIEQPITKG----- 127 (358)
T ss_pred HHHHHHHHcC---CEEEEEC---------c--cC-HHHcCCHHHHHHHHHHHHHHHHHhCCCeEEEcccCCCCCC-----
Confidence 4677777764 6666431 0 00 01122 4678889999999998877678888633221110
Q ss_pred CCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCC
Q psy11632 220 PSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQH 256 (450)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl 256 (450)
.=..+....|++ .|+.+|++.+.
T Consensus 128 -------------~~d~~~~t~llk-elr~~l~~~~~ 150 (358)
T cd02875 128 -------------SPEYYALTELVK-ETTKAFKKENP 150 (358)
T ss_pred -------------cchHHHHHHHHH-HHHHHHhhcCC
Confidence 012356678888 79999998754
No 66
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism]
Probab=43.64 E-value=32 Score=34.66 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=43.3
Q ss_pred cccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCc
Q psy11632 137 QYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNE 213 (450)
Q Consensus 137 ~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNE 213 (450)
.++...-+.|++..|+ .|++.+--| .. + -.+=.+|+.+.|+.++++|+||++|.+|--
T Consensus 171 d~I~~aF~~AreadP~-AkL~~NDY~-----------ie-~------~~~kr~~~~nlI~~LkekG~pIDgiG~QsH 228 (345)
T COG3693 171 DYIKLAFHIAREADPD-AKLVINDYS-----------IE-G------NPAKRNYVLNLIEELKEKGAPIDGIGIQSH 228 (345)
T ss_pred HHHHHHHHHHHhhCCC-ceEEeeccc-----------cc-C------ChHHHHHHHHHHHHHHHCCCCccceeeeee
Confidence 3566777888888887 898887432 10 1 111246899999999999999999999976
No 67
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=43.08 E-value=39 Score=36.07 Aligned_cols=95 Identities=12% Similarity=0.083 Sum_probs=54.0
Q ss_pred HHHHhcCceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHh-cc--CchhhhhhhhhhcCCCCCCC
Q psy11632 308 ERKYLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENL-NH--GLVAWLEWNLALNTQGGTNW 381 (450)
Q Consensus 308 ~~~~~~~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l-~~--~~~a~~~W~~~~~~~gg~~~ 381 (450)
.+++.|+++|++||.+.+..+ .. +..+. ..+-.|...+...| ..++ .. .+-+|+.|.++.+- .|
T Consensus 361 ~~~~~Y~~Pi~ItENG~~~~d----~~-~~~g~-i~D~~Ri~Yl~~hl~~~~~Ai~~dGv~V~GY~~WSl~Dn~----Ew 430 (476)
T PRK09589 361 WFWDHYQLPLFIVENGFGAID----QR-EADGT-VNDHYRIDYLAAHIREMKKAVVEDGVDLMGYTPWGCIDLV----SA 430 (476)
T ss_pred HHHHhcCCCEEEEeCCcccCC----CC-CcCCc-ccCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccccccc----cc
Confidence 455677889999998765211 00 00000 11223444444443 4455 33 47899999998553 35
Q ss_pred CCC---ccCccEEEeCCCC-----EEEEchhhHhhhhhc
Q psy11632 382 KNN---FLDAPIIVNAAKD-----EFYKQPMFYAIGHFS 412 (450)
Q Consensus 382 ~~~---~~~~li~~d~~~g-----~~~~~~~yy~~g~fs 412 (450)
..+ ...||+.||.++. +=++.+.++-++.+.
T Consensus 431 ~~G~y~~RfGlv~VD~~~~~~~t~~R~pK~S~~wy~~~i 469 (476)
T PRK09589 431 GTGEMKKRYGFIYVDKDNEGKGTLERSRKKSFYWYRDVI 469 (476)
T ss_pred cCCccccceeeEEEcCCCCCCcccccccccHHHHHHHHH
Confidence 322 3469999998743 333455677666554
No 68
>PLN02814 beta-glucosidase
Probab=41.67 E-value=49 Score=35.64 Aligned_cols=91 Identities=13% Similarity=0.028 Sum_probs=54.0
Q ss_pred HHHHhcCc-eeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhcc--CchhhhhhhhhhcCCCCCCC
Q psy11632 308 ERKYLFKL-YILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLNH--GLVAWLEWNLALNTQGGTNW 381 (450)
Q Consensus 308 ~~~~~~~k-~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~~--~~~a~~~W~~~~~~~gg~~~ 381 (450)
.+++.|++ +|++||.+.+..+ +. . ..+-.+...+..+| ..++.. ++-+|+.|.++.+- .|
T Consensus 380 ~~~~rY~~ppI~ITENG~~~~~-------~g--~-i~D~~Ri~Yl~~hl~~l~~Ai~dGv~V~GY~~WSllDnf----EW 445 (504)
T PLN02814 380 HIKQSYNNPPIYILENGMPMKH-------DS--T-LQDTPRVEFIQAYIGAVLNAIKNGSDTRGYFVWSMIDLY----EL 445 (504)
T ss_pred HHHHhcCCCCEEEECCCCCCCC-------CC--c-ccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh----ch
Confidence 45566755 7999998765210 00 0 11223444454444 444543 47799999997553 35
Q ss_pred CC--CccCccEEEeCCCC--EEEEchhhHhhhhhc
Q psy11632 382 KN--NFLDAPIIVNAAKD--EFYKQPMFYAIGHFS 412 (450)
Q Consensus 382 ~~--~~~~~li~~d~~~g--~~~~~~~yy~~g~fs 412 (450)
.. ....||+.||.++. +=++.+.++-++.+.
T Consensus 446 ~~Gy~~RfGLvyVD~~~~~~~R~pK~S~~wy~~~i 480 (504)
T PLN02814 446 LGGYTTSFGMYYVNFSDPGRKRSPKLSASWYTGFL 480 (504)
T ss_pred hccccCccceEEECCCCCCcceeeecHHHHHHHHH
Confidence 32 23469999998864 445566677766654
No 69
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
Probab=41.61 E-value=1.1e+02 Score=30.32 Aligned_cols=54 Identities=9% Similarity=0.079 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCC
Q psy11632 181 TQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQH 256 (450)
Q Consensus 181 ~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl 256 (450)
++..+.|++-++++++.+.=.||+|+. |+ ++. =+.+....|++ .|+.+|++.|+
T Consensus 85 ~~~r~~fi~~iv~~l~~~~~DGidiDw-----E~---------------~~~-~d~~~~~~fl~-~lr~~l~~~~~ 138 (313)
T cd02874 85 PEARQRLINNILALAKKYGYDGVNIDF-----EN---------------VPP-EDREAYTQFLR-ELSDRLHPAGY 138 (313)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEec-----cc---------------CCH-HHHHHHHHHHH-HHHHHhhhcCc
Confidence 356788999999999888667888863 11 100 02355778888 79999988775
No 70
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=41.47 E-value=68 Score=32.83 Aligned_cols=201 Identities=12% Similarity=0.142 Sum_probs=89.1
Q ss_pred cchHHHHHHHHHHHHH---HHHHHH-cCCcee-----eeccCCcCCCCCCCCCCCCCCCCCC-----CccCHHHHHHHHH
Q psy11632 179 LKTQYYQTWAQYLIMF---LDFYKR-EQLSFW-----ALTTGNEPINGDLPSFLPFVPKFNS-----MGWHPKSVATWIA 244 (450)
Q Consensus 179 L~~~~y~~~A~Yl~~~---v~~~~~-~Gi~i~-----~is~qNEP~~~~~~~~~~~~~~~~~-----~~~~~~~~~~fi~ 244 (450)
-.+..-++|.+||.+= |+.+.+ -|..++ ...=...|...... .-|+ ..|..+.+.+|++
T Consensus 144 ~~~~~~~~f~~wLk~kY~ti~~LN~aWgt~~ws~~~~~f~~v~~P~~~~~~-------~~~~~~~D~~rF~~~~~~~~~~ 216 (374)
T PF02449_consen 144 YSPACQAAFRQWLKEKYGTIEALNRAWGTAFWSQRYSSFDEVPPPRPTSSP-------ENPAQWLDWYRFQSDRVAEFFR 216 (374)
T ss_dssp -SHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGG---SSGGG---S-S-SS----------HHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCCHHHHHHHHcCCcccCccCcHHhcCCCCCCCCC-------CChHHHHHHHHHHHHHHHHHHH
Confidence 3456777788887654 445554 376661 11111123221000 0111 2456677778887
Q ss_pred HhhHHHHhcCCCCCeEEEEe---c-CCCCChhhhHHhheeeEeeecCC---C--CCChhhhccccCCCchHHHHHHhc--
Q psy11632 245 NNLGPTLRSSQHNATKILAI---D-DQRFVLPWWLEQVCNIGLRMFQD---K--LPIPEKILRKDIPSMNVVERKYLF-- 313 (450)
Q Consensus 245 ~~L~~~l~~~gl~~~kI~~~---d-~~~~~~~~~~~~v~~ia~H~Y~~---~--~~~~~~~~~~~~~~~~~~~~~~~~-- 313 (450)
.+...+++...+ ..|... . ....+...+.+.+..++++.|.. . ...+ ..+. -...+.+..
T Consensus 217 -~~~~~ir~~~p~-~~vt~n~~~~~~~~~d~~~~a~~~D~~~~d~Y~~~~~~~~~~~~-~~~a------~~~dl~R~~~~ 287 (374)
T PF02449_consen 217 -WQADIIREYDPD-HPVTTNFMGSWFNGIDYFKWAKYLDVVSWDSYPDGSFDFYDDDP-YSLA------FNHDLMRSLAK 287 (374)
T ss_dssp -HHHHHHHHHSTT--EEE-EE-TT---SS-HHHHGGGSSSEEEEE-HHHHHTTTT--T-THHH------HHHHHHHHHTT
T ss_pred -HHHHHHHHhCCC-ceEEeCccccccCcCCHHHHHhhCCcceeccccCcccCCCCCCH-HHHH------HHHHHHHhhcC
Confidence 688888887643 444421 1 11122233455666889999876 1 1111 1111 011233333
Q ss_pred CceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHHHHHhccCchhhhhhhhhhcCCCCCCCCCCccCccEEEe
Q psy11632 314 KLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNHGLVAWLEWNLALNTQGGTNWKNNFLDAPIIVN 393 (450)
Q Consensus 314 ~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i~~~l~~~~~a~~~W~~~~~~~gg~~~~~~~~~~li~~d 393 (450)
+|+.|++|...+ ...|.... .-..--.+.......+-+|+.+.++|....... |.. .++.|++ +
T Consensus 288 ~kpf~v~E~~~g------~~~~~~~~----~~~~pg~~~~~~~~~~A~Ga~~i~~~~wr~~~~-g~E---~~~~g~~--~ 351 (374)
T PF02449_consen 288 GKPFWVMEQQPG------PVNWRPYN----RPPRPGELRLWSWQAIAHGADGILFWQWRQSRF-GAE---QFHGGLV--D 351 (374)
T ss_dssp T--EEEEEE--S--------SSSSS---------TTHHHHHHHHHHHTT-S-EEEC-SB--SS-STT---TTS--SB---
T ss_pred CCceEeecCCCC------CCCCccCC----CCCCCCHHHHHHHHHHHHhCCeeEeeeccCCCC-Cch---hhhcccC--C
Confidence 899999998765 22221100 000111344556777888999999998743322 221 2334655 4
Q ss_pred CCCCEEEEchhhHhhhhhcc
Q psy11632 394 AAKDEFYKQPMFYAIGHFSR 413 (450)
Q Consensus 394 ~~~g~~~~~~~yy~~g~fsr 413 (450)
.++ -..+.+|..+.++.+
T Consensus 352 ~dg--~~~~~~~~e~~~~~~ 369 (374)
T PF02449_consen 352 HDG--REPTRRYREVAQLGR 369 (374)
T ss_dssp TTS----B-HHHHHHHHHHH
T ss_pred ccC--CCCCcHHHHHHHHHH
Confidence 432 125778888887754
No 71
>PLN02849 beta-glucosidase
Probab=40.91 E-value=43 Score=36.06 Aligned_cols=94 Identities=13% Similarity=0.045 Sum_probs=55.1
Q ss_pred HHHHhcCc-eeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhcc--CchhhhhhhhhhcCCCCCCC
Q psy11632 308 ERKYLFKL-YILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLNH--GLVAWLEWNLALNTQGGTNW 381 (450)
Q Consensus 308 ~~~~~~~k-~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~~--~~~a~~~W~~~~~~~gg~~~ 381 (450)
.+++.|++ +|++||.+.+..+ . -+ + ...+-.|...+..+| +..+.. ++-+|+.|.++.+- .|
T Consensus 378 ~~~~rY~~pPi~ITENG~~~~d---~--~~--~-~v~D~~Ri~Yl~~hL~~l~~Ai~dGv~V~GY~~WSl~Dnf----EW 445 (503)
T PLN02849 378 YIKQSYGNPPVYILENGTPMKQ---D--LQ--L-QQKDTPRIEYLHAYIGAVLKAVRNGSDTRGYFVWSFMDLY----EL 445 (503)
T ss_pred HHHHhcCCCCEEEeCCCCCccC---C--CC--C-cccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh----ch
Confidence 45567766 7999998765211 0 00 0 011223444444444 445543 47899999997553 35
Q ss_pred CC--CccCccEEEeCCCC--EEEEchhhHhhhhhcc
Q psy11632 382 KN--NFLDAPIIVNAAKD--EFYKQPMFYAIGHFSR 413 (450)
Q Consensus 382 ~~--~~~~~li~~d~~~g--~~~~~~~yy~~g~fsr 413 (450)
.. .-..||+.||.++. +=++.+.++-++.+.+
T Consensus 446 ~~Gy~~RfGLi~VD~~~~~~~R~pK~S~~wy~~ii~ 481 (503)
T PLN02849 446 LKGYEFSFGLYSVNFSDPHRKRSPKLSAHWYSAFLK 481 (503)
T ss_pred hccccCccceEEECCCCCCcceecccHHHHHHHHHH
Confidence 32 22459999998864 4455667777666644
No 72
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=39.15 E-value=54 Score=35.04 Aligned_cols=97 Identities=13% Similarity=0.070 Sum_probs=54.0
Q ss_pred HHHHHHhcCceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHH---HHHhc-c--CchhhhhhhhhhcCCCCC
Q psy11632 306 VVERKYLFKLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDI---IENLN-H--GLVAWLEWNLALNTQGGT 379 (450)
Q Consensus 306 ~~~~~~~~~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i---~~~l~-~--~~~a~~~W~~~~~~~gg~ 379 (450)
+..++++|+++|++||.+.+..+ .. +..+. ..+=.+...+...| ...+. . ++.+|+.|.++.+.
T Consensus 360 l~~~~~~Y~~Pi~ItENG~~~~d----~~-~~~g~-i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn~---- 429 (478)
T PRK09593 360 LNTIWDRYQKPMFIVENGLGAVD----KP-DENGY-VEDDYRIDYLAAHIKAMRDAINEDGVELLGYTTWGCIDLV---- 429 (478)
T ss_pred HHHHHHHcCCCEEEEcCCCCCCC----CC-CCCCc-cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchHhh----
Confidence 33556677889999998765211 00 00010 11112333344443 44553 3 46799999998553
Q ss_pred CCCCC---ccCccEEEeCCCC-----EEEEchhhHhhhhhc
Q psy11632 380 NWKNN---FLDAPIIVNAAKD-----EFYKQPMFYAIGHFS 412 (450)
Q Consensus 380 ~~~~~---~~~~li~~d~~~g-----~~~~~~~yy~~g~fs 412 (450)
.|..+ ...||+.||.++. +=++.+.++.++.+.
T Consensus 430 EW~~G~y~~RfGl~~VD~~~~~~~~~~R~pK~S~~wy~~ii 470 (478)
T PRK09593 430 SAGTGEMKKRYGFIYVDRDNEGKGTLKRSKKKSFDWYKKVI 470 (478)
T ss_pred cccCCCccCeeceEEECCCCCCCcccceecccHHHHHHHHH
Confidence 34322 2459999998753 334455677666554
No 73
>KOG0626|consensus
Probab=32.63 E-value=74 Score=34.21 Aligned_cols=106 Identities=16% Similarity=0.113 Sum_probs=0.0
Q ss_pred hhhccccCCCchHHHHHHhc-CceeEEeccccCCCCCCCCCCCccccccCCChHHHHHHHHHHHHHhcc------Cchhh
Q psy11632 294 EKILRKDIPSMNVVERKYLF-KLYILVYTAFAGIKGLFSDKPWDLIKVQLGSWSRAEQYISDIIENLNH------GLVAW 366 (450)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~-~k~~w~TE~~~~~~g~~~~~~~~~~~~~~~~w~~~~~~a~~i~~~l~~------~~~a~ 366 (450)
+..|. -+.+.| +.+++.||...+.. ............+-.|-..+.+.|..-.++ ++.+|
T Consensus 395 r~~L~---------yiK~~Y~np~iyItENG~~d~----~~~~~~~~~~l~D~~Ri~Y~~~~L~~~~kAi~~dgvnv~GY 461 (524)
T KOG0626|consen 395 RKLLN---------YIKDKYGNPPIYITENGFDDL----DGGTKSLEVALKDTKRIEYLQNHLQAVLKAIKEDGVNVKGY 461 (524)
T ss_pred HHHHH---------HHHhhcCCCcEEEEeCCCCcc----cccccchhhhhcchHHHHHHHHHHHHHHHHHHhcCCceeeE
Q ss_pred hhhhhhhcCCCCCCCCCCccCccEEEeCCCCEEEEchhhHhhhhhccccC
Q psy11632 367 LEWNLALNTQGGTNWKNNFLDAPIIVNAAKDEFYKQPMFYAIGHFSRFIK 416 (450)
Q Consensus 367 ~~W~~~~~~~gg~~~~~~~~~~li~~d~~~g~~~~~~~yy~~g~fsrfvr 416 (450)
..|.|+.+.+-.... ....||..||.++. ..+..---..-|++||+
T Consensus 462 f~WSLmDnfEw~~Gy--~~RFGlyyVDf~d~--l~R~pK~Sa~wy~~fl~ 507 (524)
T KOG0626|consen 462 FVWSLLDNFEWLDGY--KVRFGLYYVDFKDP--LKRYPKLSAKWYKKFLK 507 (524)
T ss_pred EEeEcccchhhhcCc--ccccccEEEeCCCC--CcCCchhHHHHHHHHHc
No 74
>KOG0177|consensus
Probab=31.09 E-value=1.5e+02 Score=27.45 Aligned_cols=77 Identities=19% Similarity=0.304 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHH-HcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEE
Q psy11632 185 QTWAQYLIMFLDFYK-REQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILA 263 (450)
Q Consensus 185 ~~~A~Yl~~~v~~~~-~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~ 263 (450)
-.|++|..+=++.|+ ++|++ .+|...+.|+++.|...|+++..=++-|++
T Consensus 54 ~qF~eyi~~Ni~LYkirnGye-----------------------------LSp~~aahFtR~~La~~LRsr~~yqV~~Lv 104 (200)
T KOG0177|consen 54 VQFTEYIQKNIQLYKIRNGYE-----------------------------LSPSAAAHFTRRELAESLRSRTPYQVNILV 104 (200)
T ss_pred ehHHHHHHhhhhHHhhhcCCc-----------------------------CCHHHHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 458999999999998 45544 457888999999999999965432255544
Q ss_pred --ecCCCC-Ch--hhhHHhhe--eeEeeecCCCC
Q psy11632 264 --IDDQRF-VL--PWWLEQVC--NIGLRMFQDKL 290 (450)
Q Consensus 264 --~d~~~~-~~--~~~~~~v~--~ia~H~Y~~~~ 290 (450)
.|.+.. .+ -+|...+. -.+.|.|++..
T Consensus 105 aGYd~~~gp~L~~iDyla~~~~vpy~~hGy~~~f 138 (200)
T KOG0177|consen 105 AGYDPEEGPELYYIDYLATLVSVPYAAHGYGSYF 138 (200)
T ss_pred eccCCCCCCceeeehhhhhcccCCcccccchhhh
Confidence 454433 10 12222222 36788888754
No 75
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=30.85 E-value=78 Score=31.78 Aligned_cols=57 Identities=9% Similarity=0.068 Sum_probs=41.0
Q ss_pred cccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCc
Q psy11632 137 QYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNE 213 (450)
Q Consensus 137 ~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNE 213 (450)
.++....+.|++..|+ ++++.+-. +. +.+.. .+-+.+.|+.+++.|++|++|.+|-=
T Consensus 156 ~yi~~aF~~A~~~~P~-a~L~~NDy---------~~------~~~~k----~~~~~~lv~~l~~~gvpIdgIG~Q~H 212 (320)
T PF00331_consen 156 DYIADAFRAAREADPN-AKLFYNDY---------NI------ESPAK----RDAYLNLVKDLKARGVPIDGIGLQSH 212 (320)
T ss_dssp CHHHHHHHHHHHHHTT-SEEEEEES---------ST------TSTHH----HHHHHHHHHHHHHTTHCS-EEEEEEE
T ss_pred hHHHHHHHHHHHhCCC-cEEEeccc---------cc------cchHH----HHHHHHHHHHHHhCCCccceechhhc
Confidence 4667788999999997 89988631 11 11122 35566899999999999999999854
No 76
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=30.33 E-value=2.2e+02 Score=26.94 Aligned_cols=66 Identities=18% Similarity=0.134 Sum_probs=44.0
Q ss_pred HHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCC
Q psy11632 140 IPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPING 217 (450)
Q Consensus 140 ~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~ 217 (450)
-..++++++.|.+.++|... | +.+++.+. ++.+ ...+-..|-+.|+..++.||.+ -|.+.+.|.|.
T Consensus 24 ~~~~~~~~~~G~n~VRi~v~-~--~~~~~~~~----~~~~----~~~~~~~ld~~v~~a~~~gi~v-ild~h~~~~w~ 89 (281)
T PF00150_consen 24 EADFDQLKALGFNTVRIPVG-W--EAYQEPNP----GYNY----DETYLARLDRIVDAAQAYGIYV-ILDLHNAPGWA 89 (281)
T ss_dssp HHHHHHHHHTTESEEEEEEE-S--TSTSTTST----TTSB----THHHHHHHHHHHHHHHHTT-EE-EEEEEESTTCS
T ss_pred HHHHHHHHHCCCCEEEeCCC-H--HHhcCCCC----Cccc----cHHHHHHHHHHHHHHHhCCCeE-EEEeccCcccc
Confidence 35678888899987888776 4 22331111 1122 3355578889999999999998 58898888763
No 77
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=29.96 E-value=1.2e+02 Score=29.13 Aligned_cols=56 Identities=9% Similarity=0.055 Sum_probs=39.6
Q ss_pred cccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccC
Q psy11632 137 QYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTG 211 (450)
Q Consensus 137 ~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~q 211 (450)
.++....+.|++..|+ ++++.+-.. -.. .+ .-.+.+.++|+.+++.|++|++|.+|
T Consensus 103 ~~i~~af~~ar~~~P~-a~l~~Ndy~---------~~~-~~--------~k~~~~~~~v~~l~~~g~~iDgiGlQ 158 (254)
T smart00633 103 DYIEKAFRYAREADPD-AKLFYNDYN---------TEE-PN--------AKRQAIYELVKKLKAKGVPIDGIGLQ 158 (254)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEeccC---------CcC-cc--------HHHHHHHHHHHHHHHCCCccceeeee
Confidence 3566778899999997 898886211 111 00 11346778899999999999999996
No 78
>KOG1097|consensus
Probab=29.24 E-value=2.3e+02 Score=29.50 Aligned_cols=71 Identities=11% Similarity=0.133 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC---ceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCC
Q psy11632 182 QYYQTWAQYLIMFLDFYKREQL---SFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNA 258 (450)
Q Consensus 182 ~~y~~~A~Yl~~~v~~~~~~Gi---~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~ 258 (450)
-+-++|.+|.-.+++.+.++|+ .+....||..- ..|- ++++....++.+.+....+..+++
T Consensus 114 ~~~~~~~~~~y~~~eef~~dgVvY~E~Rt~~p~l~~--------------~~G~-~t~e~~v~~~~~~~e~~~~~fpI~- 177 (399)
T KOG1097|consen 114 IYAPAFRDYAYEALEEFAEDGVVYLEVRTYPPQLYT--------------ADGD-ITPEDVVAIVIAALEKAKRDFPIK- 177 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHcCceEEEEEccCchhhh--------------cCCC-CCHHHHHHHHHHHHHHHHHhCCCc-
Confidence 3778899999999999999987 55556666553 1344 888888888888999999999997
Q ss_pred eEEEEecCCC
Q psy11632 259 TKILAIDDQR 268 (450)
Q Consensus 259 ~kI~~~d~~~ 268 (450)
+|+|.+-.-.
T Consensus 178 sklI~~~~R~ 187 (399)
T KOG1097|consen 178 SKLIMCCIRH 187 (399)
T ss_pred ceEEEeeccC
Confidence 7888765433
No 79
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=27.97 E-value=1.5e+02 Score=25.67 Aligned_cols=46 Identities=7% Similarity=-0.046 Sum_probs=33.5
Q ss_pred HHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEe
Q psy11632 194 FLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAI 264 (450)
Q Consensus 194 ~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~ 264 (450)
++++.++++.++..||-.++.- ...++ .+.++|+++|+.+++|+++
T Consensus 45 ~v~aa~e~~adii~iSsl~~~~------------------------~~~~~-~~~~~L~~~g~~~i~vivG 90 (132)
T TIGR00640 45 IARQAVEADVHVVGVSSLAGGH------------------------LTLVP-ALRKELDKLGRPDILVVVG 90 (132)
T ss_pred HHHHHHHcCCCEEEEcCchhhh------------------------HHHHH-HHHHHHHhcCCCCCEEEEe
Confidence 6777778888888887665421 23345 6788889988877888886
No 80
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=27.90 E-value=3.5e+02 Score=24.13 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=56.8
Q ss_pred cccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCC
Q psy11632 137 QYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPIN 216 (450)
Q Consensus 137 ~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~ 216 (450)
......++.|+++|...+. +.+ +. + .........+.++.+++.|.+.++..++.|+. |.+-|.|..
T Consensus 71 ~~~~~~i~~a~~lg~~~i~-~~~---g~--~-----~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~---i~lE~~~~~ 136 (213)
T PF01261_consen 71 EYLKKAIDLAKRLGAKYIV-VHS---GR--Y-----PSGPEDDTEENWERLAENLRELAEIAEEYGVR---IALENHPGP 136 (213)
T ss_dssp HHHHHHHHHHHHHTBSEEE-EEC---TT--E-----SSSTTSSHHHHHHHHHHHHHHHHHHHHHHTSE---EEEE-SSSS
T ss_pred HHHHHHHHHHHHhCCCcee-ecC---cc--c-----ccccCCCHHHHHHHHHHHHHHHHhhhhhhcce---EEEecccCc
Confidence 3466778889999876222 221 11 0 01123444589999999999999999999976 455566554
Q ss_pred CCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecC
Q psy11632 217 GDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDD 266 (450)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~ 266 (450)
.. ...++.++..++++ .++ .+.++|. .|.
T Consensus 137 ~~------------~~~~~~~~~~~~l~-~~~-------~~~~~i~-~D~ 165 (213)
T PF01261_consen 137 FS------------ETPFSVEEIYRLLE-EVD-------SPNVGIC-FDT 165 (213)
T ss_dssp SS------------SEESSHHHHHHHHH-HHT-------TTTEEEE-EEH
T ss_pred cc------------cchhhHHHHHHHHh-hcC-------CCcceEE-Eeh
Confidence 31 23344677777766 333 3336665 565
No 81
>PF11455 DUF3018: Protein of unknown function (DUF3018); InterPro: IPR021558 This is a bacterial family of uncharacterised proteins.
Probab=27.17 E-value=76 Score=24.21 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=23.6
Q ss_pred hhHHHHhcCCCCCeEEEEecCCCCChhhhHHhh
Q psy11632 246 NLGPTLRSSQHNATKILAIDDQRFVLPWWLEQV 278 (450)
Q Consensus 246 ~L~~~l~~~gl~~~kI~~~d~~~~~~~~~~~~v 278 (450)
.-+.+|+++||.-++|.+||... |.+...+
T Consensus 7 khR~~lRa~GLRPVqiWVPDtr~---p~F~~E~ 36 (65)
T PF11455_consen 7 KHRERLRAAGLRPVQIWVPDTRR---PEFAAEC 36 (65)
T ss_pred HHHHHHHHcCCCcceeeCCCCCC---hHHHHHH
Confidence 35899999999889999999754 5565544
No 82
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=26.59 E-value=3.5e+02 Score=24.04 Aligned_cols=97 Identities=18% Similarity=0.092 Sum_probs=47.0
Q ss_pred ccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHH-c-CCceeeeccCCcCC
Q psy11632 138 YKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKR-E-QLSFWALTTGNEPI 215 (450)
Q Consensus 138 ~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~-~-Gi~i~~is~qNEP~ 215 (450)
....+++.+++..++ .+|+.... ||..... ... ..+ ....++...-+.+.++.+.+ . |+.+.-+.-..++.
T Consensus 92 ~l~~li~~i~~~~~~-~~iiv~~~-p~~~~~~--~~~--~~~-~~~~~~~~~~~n~~~~~~a~~~~~~~~id~~~~~~~~ 164 (191)
T cd01836 92 QLAELVDALRAKFPG-ARVVVTAV-PPLGRFP--ALP--QPL-RWLLGRRARLLNRALERLASEAPRVTLLPATGPLFPA 164 (191)
T ss_pred HHHHHHHHHHhhCCC-CEEEEECC-CCcccCC--CCc--HHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEecCCccchh
Confidence 456788888876676 67776521 4432111 111 011 12223333344444444433 3 55542222222222
Q ss_pred CCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHh
Q psy11632 216 NGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLR 252 (450)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~ 252 (450)
.. .-.+.|.+++-.+.+.. .|.++|+
T Consensus 165 ~~----------~~DglHpn~~Gy~~~a~-~l~~~i~ 190 (191)
T cd01836 165 LF----------ASDGFHPSAAGYAVWAE-ALAPAIA 190 (191)
T ss_pred hc----------cCCCCCCChHHHHHHHH-HHHHHHh
Confidence 11 23678888888776544 7777765
No 83
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
Probab=25.89 E-value=2.9e+02 Score=27.31 Aligned_cols=82 Identities=7% Similarity=0.061 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEE
Q psy11632 182 QYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKI 261 (450)
Q Consensus 182 ~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI 261 (450)
+..+.|++=++++++.+.=.||+|+. +. .-+ -.-+....|++ .|+.+|++.|+. .-|
T Consensus 87 ~~R~~fi~~iv~~~~~~~~dGidiD~---------E~---------~~~---~d~~~~~~fl~-eL~~~l~~~~~~-lsv 143 (298)
T cd06549 87 SARAKFIANIAAYLERNQADGIVLDF---------EE---------LPA---DDLPKYVAFLS-ELRRRLPAQGKQ-LTV 143 (298)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEec---------CC---------CCh---hHHHHHHHHHH-HHHHHhhhcCcE-EEE
Confidence 56778888888888877767888853 21 000 12466788888 799999988753 344
Q ss_pred EEecCC-CCChhhhHHhheeeEeeec
Q psy11632 262 LAIDDQ-RFVLPWWLEQVCNIGLRMF 286 (450)
Q Consensus 262 ~~~d~~-~~~~~~~~~~v~~ia~H~Y 286 (450)
.++-.. .++.+...+.+..+..-+|
T Consensus 144 ~v~~~~~~~d~~~l~~~~D~v~lMtY 169 (298)
T cd06549 144 TVPADEADWNLKALARNADKLILMAY 169 (298)
T ss_pred EecCCCCCCCHHHHHHhCCEEEEEEe
Confidence 433221 2233444444443333333
No 84
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins. The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment mod
Probab=24.91 E-value=1.9e+02 Score=29.42 Aligned_cols=67 Identities=12% Similarity=0.058 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeE
Q psy11632 181 TQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATK 260 (450)
Q Consensus 181 ~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~k 260 (450)
++-...+|+=|++.+++|.=.|+-|+ +-|.+. -....+.+..|++ +|..++++.+.. -+
T Consensus 85 ~~~~~~~a~kLv~lak~yGfDGw~iN---~E~~~~----------------~~~~~~~l~~F~~-~L~~~~~~~~~~-~~ 143 (339)
T cd06547 85 EDGSFPVADKLVEVAKYYGFDGWLIN---IETELG----------------DAEKAKRLIAFLR-YLKAKLHENVPG-SL 143 (339)
T ss_pred cccchHHHHHHHHHHHHhCCCceEee---eeccCC----------------cHHHHHHHHHHHH-HHHHHHhhcCCC-cE
Confidence 35667889999999998886666553 111110 1134688899999 899999998764 79
Q ss_pred EEEecCCC
Q psy11632 261 ILAIDDQR 268 (450)
Q Consensus 261 I~~~d~~~ 268 (450)
|+=.|...
T Consensus 144 v~WYDs~t 151 (339)
T cd06547 144 VIWYDSMT 151 (339)
T ss_pred EEEEecCC
Confidence 98888863
No 85
>PF08534 Redoxin: Redoxin; InterPro: IPR013740 This redoxin domain is found in peroxiredoxin, thioredoxin and glutaredoxin proteins. Peroxiredoxins (Prxs) constitute a family of thiol peroxidases that reduce hydrogen peroxide, peroxinitrite, and hydroperoxides using a strictly conserved cysteine []. Chloroplast thioredoxin systems in plants regulate the enzymes involved in photosynthetic carbon assimilation []. It is thought that redoxins have a large role to play in anti-oxidant defence. Cadmium-sensitive proteins are also regulated via thioredoxin and glutaredoxin thiol redox systems [].; GO: 0016491 oxidoreductase activity; PDB: 2H30_A 1TP9_A 1Y25_A 1XVQ_A 2B1K_A 2G0F_A 2B1L_B 3K8N_A 1Z5Y_E 3OR5_A ....
Probab=23.94 E-value=66 Score=27.58 Aligned_cols=31 Identities=16% Similarity=0.368 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCceeeeccCCcC
Q psy11632 183 YYQTWAQYLIMFLDFYKREQLSFWALTTGNEP 214 (450)
Q Consensus 183 ~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP 214 (450)
+..... +|.++.+.|++.|+.+.+|+..++|
T Consensus 44 C~~~~p-~l~~l~~~~~~~~v~~v~v~~~~~~ 74 (146)
T PF08534_consen 44 CRKELP-YLNELQEKYKDKGVDVVGVSSDDDP 74 (146)
T ss_dssp HHHHHH-HHHHHHHHHHTTTCEEEEEEESSSH
T ss_pred chhhhh-hHHhhhhhhccCceEEEEecccCCH
Confidence 444443 8888888899999999999776654
No 86
>PRK02801 primosomal replication protein N; Provisional
Probab=23.57 E-value=1.1e+02 Score=25.26 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=24.6
Q ss_pred hhhhhccccCCCCEEEeecCCCCceeEEEEEcCCC-CEEEEEE
Q psy11632 407 AIGHFSRFIKPGSRVLKANSRSRTVEVLATIDKDE-NHVVVVL 448 (450)
Q Consensus 407 ~~g~fsrfvrPG~~i~~~~~~~~~v~~~A~~~~dg-~~vvVv~ 448 (450)
..-+.++|++.|+.|.+++. +.. +++.+| +..+|++
T Consensus 58 ~Ae~~~~~l~kGs~v~V~G~----L~~--~~~~~g~~~~~v~~ 94 (101)
T PRK02801 58 QFQAITQSITVGSKITVQGF----ISC--HQGRNGLSKLVLHA 94 (101)
T ss_pred HHHHHHhhcCCCCEEEEEEE----EEE--eECCCCCEEEEEEE
Confidence 34566789999999998874 222 688888 4334444
No 87
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=23.47 E-value=5.6e+02 Score=24.41 Aligned_cols=78 Identities=10% Similarity=0.045 Sum_probs=49.1
Q ss_pred cHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCC
Q psy11632 139 KIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGD 218 (450)
Q Consensus 139 ~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~ 218 (450)
....++.|+++|...+ ...+. .+.+. .-..+.++.+.+.|...++..++.||.| +|.+.+.+..
T Consensus 92 ~~~~i~~a~~lGa~~i--~~~~~-~~~~~----------~~~~~~~~~~~~~l~~l~~~a~~~gv~l-~iE~~~~~~~-- 155 (275)
T PRK09856 92 IKLAMDMAKEMNAGYT--LISAA-HAGYL----------TPPNVIWGRLAENLSELCEYAENIGMDL-ILEPLTPYES-- 155 (275)
T ss_pred HHHHHHHHHHhCCCEE--EEcCC-CCCCC----------CCHHHHHHHHHHHHHHHHHHHHHcCCEE-EEecCCCCcc--
Confidence 4456788888887622 22221 11111 0124688999999999999999999977 5554432211
Q ss_pred CCCCCCCCCCCCCCccCHHHHHHHHH
Q psy11632 219 LPSFLPFVPKFNSMGWHPKSVATWIA 244 (450)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~fi~ 244 (450)
.+.-++++..++++
T Consensus 156 ------------~~~~t~~~~~~l~~ 169 (275)
T PRK09856 156 ------------NVVCNANDVLHALA 169 (275)
T ss_pred ------------cccCCHHHHHHHHH
Confidence 24557888888876
No 88
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D.
Probab=23.07 E-value=1.3e+02 Score=29.82 Aligned_cols=70 Identities=10% Similarity=-0.044 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCC--CccCHHHHHHHHHHhhHHHHhcC-CCCCeEE
Q psy11632 185 QTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNS--MGWHPKSVATWIANNLGPTLRSS-QHNATKI 261 (450)
Q Consensus 185 ~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~--~~~~~~~~~~fi~~~L~~~l~~~-gl~~~kI 261 (450)
.+|=+++-+.|+.+.+.||-+.-|-..+=|-. + ..|.. ..+++++...+++ +|...|.+- ++ +-+
T Consensus 84 ~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~~~~---~------~~Wg~~~~~m~~e~~~~Y~~-yv~~Ry~~~~Nv--iW~ 151 (289)
T PF13204_consen 84 PAYFDHLDRRIEKANELGIEAALVPFWGCPYV---P------GTWGFGPNIMPPENAERYGR-YVVARYGAYPNV--IWI 151 (289)
T ss_dssp --HHHHHHHHHHHHHHTT-EEEEESS-HHHHH----------------TTSS-HHHHHHHHH-HHHHHHTT-SSE--EEE
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEEEECCccc---c------ccccccccCCCHHHHHHHHH-HHHHHHhcCCCC--EEE
Confidence 45568899999999999999876655522211 0 12333 6788999999998 999999987 44 788
Q ss_pred EEecC
Q psy11632 262 LAIDD 266 (450)
Q Consensus 262 ~~~d~ 266 (450)
++.|.
T Consensus 152 l~gd~ 156 (289)
T PF13204_consen 152 LGGDY 156 (289)
T ss_dssp EESSS
T ss_pred ecCcc
Confidence 88887
No 89
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=22.89 E-value=5.1e+02 Score=22.58 Aligned_cols=120 Identities=16% Similarity=0.094 Sum_probs=58.8
Q ss_pred ccccccccCCceeeCCCCCCCCCcccCCCCCCccCCCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCC
Q psy11632 92 ASIGISYAFGRVPIGGCDFSTRAYTYDDIPNDKKLEKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNN 171 (450)
Q Consensus 92 ~~~Glg~si~R~~iG~~d~~~~~yt~~~~~~d~~~~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~ 171 (450)
++.|.|..++=+.+|.+|...... .....| ......+|+++++..|+ .+|+.. +||......
T Consensus 50 ~~~g~~pd~vii~~G~ND~~~~~~--------~~~~~~------~~~~~~li~~i~~~~p~-~~i~~~--~~~~~~~~~- 111 (169)
T cd01831 50 AYSGIGPDLVVINLGTNDFSTGNN--------PPGEDF------TNAYVEFIEELRKRYPD-APIVLM--LGPMLFGPY- 111 (169)
T ss_pred EecCCCCCEEEEECCcCCCCCCCC--------CCHHHH------HHHHHHHHHHHHHHCCC-CeEEEE--ecCcccccc-
Confidence 456777777777888776532110 001111 12356788889888887 666654 233321100
Q ss_pred CCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHH
Q psy11632 172 ALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTL 251 (450)
Q Consensus 172 ~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l 251 (450)
+. +++...+.+.++.+...++. .|-......... --.+.|.+++-++.+.. .|.+.|
T Consensus 112 -----~~------~~~~~~~~~~~~~~~~~~v~--~id~~~~~~~~~---------~~DgiHPn~~G~~~iA~-~l~~~i 168 (169)
T cd01831 112 -----GT------EEEIKRVAEAFKDQKSKKVH--YFDTPGILQHND---------IGCDWHPTVAGHQKIAK-HLLPAI 168 (169)
T ss_pred -----cc------HHHHHHHHHHHHhcCCceEE--EEecccccCCCC---------cCCCCCCCHHHHHHHHH-HHHHHh
Confidence 00 23333333333322222233 333322211110 12678889888887654 777776
Q ss_pred h
Q psy11632 252 R 252 (450)
Q Consensus 252 ~ 252 (450)
+
T Consensus 169 ~ 169 (169)
T cd01831 169 K 169 (169)
T ss_pred C
Confidence 3
No 90
>TIGR01464 hemE uroporphyrinogen decarboxylase. This model represents uroporphyrinogen decarboxylase (HemE), which converts uroporphyrinogen III to coproporphyrinogen III. This step takes the pathway toward protoporphyrin IX, a common precursor of both heme and chlorophyll, rather than toward precorrin 2 and its products.
Probab=22.27 E-value=4e+02 Score=26.69 Aligned_cols=53 Identities=8% Similarity=0.098 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhc
Q psy11632 183 YYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRS 253 (450)
Q Consensus 183 ~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~ 253 (450)
-.+.-++++.+|++++.+.|+++-.|. || |. ...+|++..+|+.-++...++.
T Consensus 174 ll~~~t~~~~~~~~~~~eaGad~i~i~---d~--------------~~-~~lsp~~f~ef~~p~~k~i~~~ 226 (338)
T TIGR01464 174 LLNKLTDATIEYLVEQVKAGAQAVQIF---DS--------------WA-GALSPEDFEEFVLPYLKKIIEE 226 (338)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEE---CC--------------cc-ccCCHHHHHHHHHHHHHHHHHH
Confidence 344455666777777777898874332 33 12 3589999999987555554443
No 91
>COG4130 Predicted sugar epimerase [Carbohydrate transport and metabolism]
Probab=22.13 E-value=2.4e+02 Score=26.99 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=40.1
Q ss_pred HHHHHcCCceeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCC
Q psy11632 196 DFYKREQLSFWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHN 257 (450)
Q Consensus 196 ~~~~~~Gi~i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~ 257 (450)
++.+..|..--.+.|.|.- .|++....++.+..-+| .|.|.|++.|+.
T Consensus 90 ~yA~acGA~aLvlcPlNd~-------------s~~~~~vr~~~lv~Alk-aLkpil~~~gi~ 137 (272)
T COG4130 90 DYAAACGAKALVLCPLNDG-------------SWPGTAVRREDLVEALK-ALKPILDEYGIT 137 (272)
T ss_pred HHHHhcCCceEEEEeccCC-------------CCCCcccchHHHHHHHH-HhhHHHHHhCcc
Confidence 3344678888899999972 56888899999999999 899999999985
No 92
>TIGR01464 hemE uroporphyrinogen decarboxylase. This model represents uroporphyrinogen decarboxylase (HemE), which converts uroporphyrinogen III to coproporphyrinogen III. This step takes the pathway toward protoporphyrin IX, a common precursor of both heme and chlorophyll, rather than toward precorrin 2 and its products.
Probab=21.71 E-value=2.8e+02 Score=27.74 Aligned_cols=56 Identities=13% Similarity=0.302 Sum_probs=37.8
Q ss_pred cHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHH-HHHHHHHHHHHHc--CCceeeec
Q psy11632 139 KIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWA-QYLIMFLDFYKRE--QLSFWALT 209 (450)
Q Consensus 139 ~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A-~Yl~~~v~~~~~~--Gi~i~~is 209 (450)
.+.+++...+.|.+ +..++-|| .+.|-++.|+.|+ -|+.+.++++++. ++++-.++
T Consensus 182 ~~~~~~~~~eaGad-~i~i~d~~--------------~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~ilh~c 240 (338)
T TIGR01464 182 TIEYLVEQVKAGAQ-AVQIFDSW--------------AGALSPEDFEEFVLPYLKKIIEEVKARLPNVPVILFA 240 (338)
T ss_pred HHHHHHHHHHcCCC-EEEEECCc--------------cccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 45566655566766 44444433 2457789999988 6999999999986 66665543
No 93
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.09 E-value=5.2e+02 Score=21.99 Aligned_cols=91 Identities=4% Similarity=-0.014 Sum_probs=51.1
Q ss_pred cHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCCCC
Q psy11632 139 KIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPINGD 218 (450)
Q Consensus 139 ~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~~~ 218 (450)
...+++++++..|+ .+|+.. ++|. +.... .....+.|-+.+.+.++.+...+..+..+-....-....
T Consensus 66 ~~~~i~~i~~~~p~-~~ii~~--~~~p-~~~~~--------~~~~~~~~n~~l~~~~~~~~~~~~~v~~vd~~~~~~~~~ 133 (157)
T cd01833 66 LRALIDQMRAANPD-VKIIVA--TLIP-TTDAS--------GNARIAEYNAAIPGVVADLRTAGSPVVLVDMSTGYTTAD 133 (157)
T ss_pred HHHHHHHHHHhCCC-eEEEEE--eCCC-CCCcc--------hhHHHHHHHHHHHHHHHHHhcCCCCEEEEecCCCCCCcc
Confidence 45678888888887 677755 2322 21111 035677777888888888765444443333221100010
Q ss_pred CCCCCCCCCCCCCCccCHHHHHHHHHHhhHHH
Q psy11632 219 LPSFLPFVPKFNSMGWHPKSVATWIANNLGPT 250 (450)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~ 250 (450)
. ..++.|.+++-.+.+-. .+.++
T Consensus 134 ---~-----~~Dg~Hpn~~Gy~~~a~-~~~~~ 156 (157)
T cd01833 134 ---D-----LYDGLHPNDQGYKKMAD-AWYEA 156 (157)
T ss_pred ---c-----ccCCCCCchHHHHHHHH-HHHhh
Confidence 1 35788999888776543 55443
No 94
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Some members of this family, GH18 from CAZY, belong to the chitinase class II group which includes chitinase, chitodextrinase and the killer toxin of Kluyveromyces lactis. The chitinases hydrolyse chitin oligosaccharides. The family also includes various glycoproteins from mammals; cartilage glycoprotein and the oviduct-specific glycoproteins are two examples.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1ITX_A 3ALG_A 3ALF_A 1NAR_A 3QOK_A 3G6L_A 3G6M_A 2DT1_A 2B31_A 2O92_A ....
Probab=21.04 E-value=2.1e+02 Score=28.20 Aligned_cols=124 Identities=10% Similarity=0.098 Sum_probs=71.0
Q ss_pred cHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCcc--chHHHHHHHHHHHHHHHHHHHcCCceeeeccCCcCCC
Q psy11632 139 KIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGEL--KTQYYQTWAQYLIMFLDFYKREQLSFWALTTGNEPIN 216 (450)
Q Consensus 139 ~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L--~~~~y~~~A~Yl~~~v~~~~~~Gi~i~~is~qNEP~~ 216 (450)
....++++++.+++ +|++.+.- .|-.++ .+--.+ .++..+.|++=++++++.|.=.||+|+.=.+.++++
T Consensus 60 ~~~~~~~~~~~~~~-~kvllsig---g~~~~~---~~~~~~~~~~~~r~~f~~~i~~~l~~y~~DGidiD~e~~~~~~~- 131 (343)
T PF00704_consen 60 GFKNLKELKAKNPG-VKVLLSIG---GWGMSS---DGFSQLLSNPAKRQNFINNIVSFLKKYGFDGIDIDWEYPSSSGD- 131 (343)
T ss_dssp HHHHHHHHHHHHTT--EEEEEEE---ETTSSH---HHHHHHHHSHHHHHHHHHHHHHHHHHHT-SEEEEEESSTTSTSS-
T ss_pred chhHHHHHHhhccC-ceEEEEec---cccccc---cccccccccHHHHHHHHHhhhhhhcccCcceeeeeeeecccccc-
Confidence 34456666666676 89888741 010000 000012 246789999999999999998899997555555443
Q ss_pred CCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcC-----CCCCeEEEEecCCC----CChhhhHHhheeeEeeecC
Q psy11632 217 GDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSS-----QHNATKILAIDDQR----FVLPWWLEQVCNIGLRMFQ 287 (450)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~-----gl~~~kI~~~d~~~----~~~~~~~~~v~~ia~H~Y~ 287 (450)
.-..+....||+ .|+.+|++. ++. .-+.++.... .+.....+.+..+.+.+|+
T Consensus 132 ----------------~~~~~~~~~~l~-~L~~~l~~~~~~~~~~~-ls~a~p~~~~~~~~~~~~~l~~~vD~v~~m~yD 193 (343)
T PF00704_consen 132 ----------------PQDKDNYTAFLK-ELRKALKRANRSGKGYI-LSVAVPPSPDYYDKYDYKELAQYVDYVNLMTYD 193 (343)
T ss_dssp ----------------TTHHHHHHHHHH-HHHHHHHHHHHHHSTSE-EEEEEECSHHHHTTHHHHHHHTTSSEEEEETTS
T ss_pred ----------------chhhhhhhhhhh-hhhhhhcccccccceeE-Eeecccccccccccccccccccccccccccccc
Confidence 123578889998 799999995 443 3344333211 0112223334566777765
Q ss_pred C
Q psy11632 288 D 288 (450)
Q Consensus 288 ~ 288 (450)
-
T Consensus 194 ~ 194 (343)
T PF00704_consen 194 Y 194 (343)
T ss_dssp S
T ss_pred C
Confidence 3
No 95
>PF02784 Orn_Arg_deC_N: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; InterPro: IPR022644 These enzymes are collectively known as group IV decarboxylases []. Pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates can be classified into two different families on the basis of sequence similarities [, ]. Members of this family while most probably evolutionary related, do not share extensive regions of sequence similarities. The proteins contain a conserved lysine residue which is known, in mouse ODC [], to be the site of attachment of the pyridoxal-phosphate group. The proteins also contain a stretch of three consecutive glycine residues and has been proposed to be part of a substrate- binding region [].; GO: 0003824 catalytic activity; PDB: 2OO0_A 2ON3_A 1D7K_B 3VAB_A 2J66_A 3C5Q_A 2QGH_A 1TWI_B 1TUF_A 3N2O_A ....
Probab=20.75 E-value=6.2e+02 Score=23.94 Aligned_cols=110 Identities=18% Similarity=0.263 Sum_probs=70.1
Q ss_pred CCCCCccccccccHHHHHHHHHhcCCCeEEEEeecCCCcccccCCCCCCCCccchHHHHHHHHHHHHHHHHHH-HcCCc-
Q psy11632 127 EKFNLTTEDFQYKIPLIQQANRLRGEPLRLVGSAWSAPAWMKTNNALTGRGELKTQYYQTWAQYLIMFLDFYK-REQLS- 204 (450)
Q Consensus 127 ~~f~~~~~d~~~~~~~lk~A~~~~~~~~~i~~s~WSpP~wMk~n~~~~g~G~L~~~~y~~~A~Yl~~~v~~~~-~~Gi~- 204 (450)
+.|-+..++ ....+++.+++.+ +++.+-- + -.|.+.+..+.|..-...+.++++.++ +.|++
T Consensus 133 skFGi~~~~--~~~~~l~~~~~~~---l~l~GlH------~-----H~gS~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 196 (251)
T PF02784_consen 133 SKFGIDIEE--EAEEALERAKELG---LRLVGLH------F-----HVGSQILDAEAFRQAIERLLDLAEELKEELGFED 196 (251)
T ss_dssp SSSSBEGGG--HHHHHHHHHHHTT---EEEEEEE------E------HCSSBSSCHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred CcCCcChHH--HHHHHHHhhccce---EEEEEee------e-----eeccCCcchHHHHHHHHHHHHHHhhhcccccccc
Confidence 467776644 2566777777764 5666641 1 112234567888888889999999998 68988
Q ss_pred eeeeccCCcCCCCCCCCCCCCCCCCCCCccCHHHHHHHHHHhhHHHHhcCCCCCeEEEEecC
Q psy11632 205 FWALTTGNEPINGDLPSFLPFVPKFNSMGWHPKSVATWIANNLGPTLRSSQHNATKILAIDD 266 (450)
Q Consensus 205 i~~is~qNEP~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~L~~~l~~~gl~~~kI~~~d~ 266 (450)
+..|.+.= ++..+|.. ..+.++.++.|+..+...+.. +..+.+|++ |.
T Consensus 197 l~~idiGG-----------G~~~~y~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~l~~-Ep 244 (251)
T PF02784_consen 197 LEFIDIGG-----------GFGVPYDD-EYDLEEYAEVIREALKEYFEE-GLPGPKLII-EP 244 (251)
T ss_dssp -SEEEEES-----------SB-SSSSS-SSCHHHHHHHHHHHHHHHHCH-TCTTSEEEE-EE
T ss_pred ccEEEeeC-----------CCCCCCcc-cccchhHHHHHHHHHHHHHhc-cCCCCEEEE-ee
Confidence 88887641 22223333 677889998888666655555 555577774 53
Done!