BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11633
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P97588|SMAD1_RAT Mothers against decapentaplegic homolog 1 OS=Rattus norvegicus
GN=Smad1 PE=1 SV=1
Length = 468
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/53 (96%), Positives = 51/53 (96%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH PISSVS
Sbjct: 416 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 468
>sp|Q1JQA2|SMAD1_BOVIN Mothers against decapentaplegic homolog 1 OS=Bos taurus GN=SMAD1
PE=1 SV=1
Length = 465
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/53 (96%), Positives = 51/53 (96%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH PISSVS
Sbjct: 413 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 465
>sp|P70340|SMAD1_MOUSE Mothers against decapentaplegic homolog 1 OS=Mus musculus GN=Smad1
PE=1 SV=2
Length = 465
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/53 (96%), Positives = 51/53 (96%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH PISSVS
Sbjct: 413 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 465
>sp|Q15797|SMAD1_HUMAN Mothers against decapentaplegic homolog 1 OS=Homo sapiens GN=SMAD1
PE=1 SV=1
Length = 465
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/53 (96%), Positives = 51/53 (96%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH PISSVS
Sbjct: 413 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 465
>sp|O15198|SMAD9_HUMAN Mothers against decapentaplegic homolog 9 OS=Homo sapiens GN=SMAD9
PE=1 SV=1
Length = 467
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/53 (96%), Positives = 51/53 (96%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH PISSVS
Sbjct: 415 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 467
>sp|Q9I962|SMAD1_COTJA Mothers against decapentaplegic homolog 1 OS=Coturnix coturnix
japonica GN=SMAD1 PE=2 SV=1
Length = 465
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/53 (96%), Positives = 51/53 (96%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH PISSVS
Sbjct: 413 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 465
>sp|Q9JIW5|SMAD9_MOUSE Mothers against decapentaplegic homolog 9 OS=Mus musculus GN=Smad9
PE=1 SV=2
Length = 430
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/53 (96%), Positives = 51/53 (96%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH PISSVS
Sbjct: 378 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 430
>sp|O54835|SMAD9_RAT Mothers against decapentaplegic homolog 9 OS=Rattus norvegicus
GN=Smad9 PE=1 SV=1
Length = 434
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/53 (96%), Positives = 51/53 (96%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH PISSVS
Sbjct: 382 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 434
>sp|Q9I8V2|SMAD1_DANRE Mothers against decapentaplegic homolog 1 OS=Danio rerio GN=smad1
PE=2 SV=1
Length = 472
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 51/53 (96%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGA+YHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH PISSVS
Sbjct: 420 RMSFVKGWGAKYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 472
>sp|P42003|MAD_DROME Protein mothers against dpp OS=Drosophila melanogaster GN=Mad PE=1
SV=1
Length = 455
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 50/53 (94%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSPH ISSVS
Sbjct: 403 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNAISSVS 455
>sp|P97454|SMAD5_MOUSE Mothers against decapentaplegic homolog 5 OS=Mus musculus GN=Smad5
PE=1 SV=2
Length = 465
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 50/53 (94%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSP PISSVS
Sbjct: 413 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>sp|Q9R1V3|SMAD5_RAT Mothers against decapentaplegic homolog 5 OS=Rattus norvegicus
GN=Smad5 PE=2 SV=1
Length = 465
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 50/53 (94%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSP PISSVS
Sbjct: 413 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>sp|Q5R6H7|SMAD5_PONAB Mothers against decapentaplegic homolog 5 OS=Pongo abelii GN=SMAD5
PE=2 SV=1
Length = 465
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 50/53 (94%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSP PISSVS
Sbjct: 413 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>sp|Q99717|SMAD5_HUMAN Mothers against decapentaplegic homolog 5 OS=Homo sapiens GN=SMAD5
PE=1 SV=1
Length = 465
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 50/53 (94%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSP PISSVS
Sbjct: 413 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>sp|Q56I99|SMAD5_CHICK Mothers against decapentaplegic homolog 5 OS=Gallus gallus GN=SMAD5
PE=2 SV=1
Length = 465
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 50/53 (94%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL QMGSP PISSVS
Sbjct: 413 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS 465
>sp|Q9W7E7|SMAD5_DANRE Mothers against decapentaplegic homolog 5 OS=Danio rerio GN=smad5
PE=2 SV=1
Length = 464
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/53 (92%), Positives = 50/53 (94%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEYHRQDVTSTPCWIE+HLHGPLQWLDKVL QMGSP PISSVS
Sbjct: 412 RMSFVKGWGAEYHRQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPLNPISSVS 464
>sp|Q02330|SMA2_CAEEL Dwarfin sma-2 OS=Caenorhabditis elegans GN=sma-2 PE=2 SV=2
Length = 418
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 45/53 (84%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQDVTSTPCWIEIHLH PL WLD+VL MG +PISS+S
Sbjct: 366 RMSFVKGWGAEYQRQDVTSTPCWIEIHLHAPLAWLDRVLSTMGPTPRPISSIS 418
>sp|P84023|SMAD3_CHICK Mothers against decapentaplegic homolog 3 OS=Gallus gallus GN=SMAD3
PE=2 SV=1
Length = 426
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SSVS
Sbjct: 374 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 426
>sp|P84025|SMAD3_RAT Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus
GN=Smad3 PE=1 SV=1
Length = 425
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SSVS
Sbjct: 373 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
>sp|P84024|SMAD3_PIG Mothers against decapentaplegic homolog 3 OS=Sus scrofa GN=SMAD3
PE=2 SV=1
Length = 425
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SSVS
Sbjct: 373 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
>sp|Q8BUN5|SMAD3_MOUSE Mothers against decapentaplegic homolog 3 OS=Mus musculus GN=Smad3
PE=1 SV=2
Length = 425
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SSVS
Sbjct: 373 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
>sp|P84022|SMAD3_HUMAN Mothers against decapentaplegic homolog 3 OS=Homo sapiens GN=SMAD3
PE=1 SV=1
Length = 425
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SSVS
Sbjct: 373 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS 425
>sp|O70436|SMAD2_RAT Mothers against decapentaplegic homolog 2 OS=Rattus norvegicus
GN=Smad2 PE=2 SV=1
Length = 467
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SS+S
Sbjct: 415 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
>sp|Q62432|SMAD2_MOUSE Mothers against decapentaplegic homolog 2 OS=Mus musculus GN=Smad2
PE=1 SV=2
Length = 467
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SS+S
Sbjct: 415 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
>sp|Q5R7C0|SMAD2_PONAB Mothers against decapentaplegic homolog 2 OS=Pongo abelii GN=SMAD2
PE=2 SV=1
Length = 467
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SS+S
Sbjct: 415 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
>sp|Q15796|SMAD2_HUMAN Mothers against decapentaplegic homolog 2 OS=Homo sapiens GN=SMAD2
PE=1 SV=1
Length = 467
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SS+S
Sbjct: 415 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
>sp|Q9I9P9|SMAD2_DANRE Mothers against decapentaplegic homolog 2 OS=Danio rerio GN=smad2
PE=2 SV=1
Length = 468
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SS+S
Sbjct: 416 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 468
>sp|Q1W668|SMAD2_BOVIN Mothers against decapentaplegic homolog 2 OS=Bos taurus GN=SMAD2
PE=2 SV=1
Length = 467
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQMGSPHQPISSVS 127
RMSFVKGWGAEY RQ VTSTPCWIE+HL+GPLQWLDKVL QMGSP SS+S
Sbjct: 415 RMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS 467
>sp|P97471|SMAD4_MOUSE Mothers against decapentaplegic homolog 4 OS=Mus musculus GN=Smad4
PE=1 SV=2
Length = 551
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 33/44 (75%)
Query: 73 ISRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQM 116
I RMSFVKGWG +Y RQ + TPCWIEIHLH LQ LD+VL M
Sbjct: 499 ILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTM 542
>sp|O70437|SMAD4_RAT Mothers against decapentaplegic homolog 4 OS=Rattus norvegicus
GN=Smad4 PE=1 SV=1
Length = 552
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 34/46 (73%)
Query: 71 VLISRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQM 116
+ I RMSFVKGWG +Y RQ + TPCWIEIHLH LQ LD+VL M
Sbjct: 498 LCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTM 543
>sp|Q1HE26|SMAD4_BOVIN Mothers against decapentaplegic homolog 4 OS=Bos taurus GN=SMAD4
PE=2 SV=1
Length = 553
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 34/46 (73%)
Query: 71 VLISRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQM 116
+ I RMSFVKGWG +Y RQ + TPCWIEIHLH LQ LD+VL M
Sbjct: 499 LCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTM 544
>sp|Q9GKQ9|SMAD4_PIG Mothers against decapentaplegic homolog 4 OS=Sus scrofa GN=SMAD4
PE=2 SV=1
Length = 552
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 34/46 (73%)
Query: 71 VLISRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQM 116
+ I RMSFVKGWG +Y RQ + TPCWIEIHLH LQ LD+VL M
Sbjct: 498 LCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTM 543
>sp|Q13485|SMAD4_HUMAN Mothers against decapentaplegic homolog 4 OS=Homo sapiens GN=SMAD4
PE=1 SV=1
Length = 552
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 34/46 (73%)
Query: 71 VLISRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQM 116
+ I RMSFVKGWG +Y RQ + TPCWIEIHLH LQ LD+VL M
Sbjct: 498 LCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTM 543
>sp|P45896|SMA3_CAEEL Dwarfin sma-3 OS=Caenorhabditis elegans GN=sma-3 PE=2 SV=1
Length = 393
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 34/41 (82%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLIQ 115
R+SFVKGWG +Y RQDVTSTPCW+E+ L+ PL ++D+ + Q
Sbjct: 340 RISFVKGWGEDYPRQDVTSTPCWLELRLNVPLAYIDQKMKQ 380
>sp|P45897|SMA4_CAEEL Dwarfin sma-4 OS=Caenorhabditis elegans GN=sma-4 PE=2 SV=1
Length = 570
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 76 MSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVL 113
+SFVK WG Y R+ + TPCWIE+ LH PLQ LD++L
Sbjct: 524 ISFVKAWGDVYQRKTIKETPCWIEVTLHRPLQILDQLL 561
>sp|O43541|SMAD6_HUMAN Mothers against decapentaplegic homolog 6 OS=Homo sapiens GN=SMAD6
PE=1 SV=2
Length = 496
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLHGP 105
R+SF KGWG Y RQ +TS PCW+EI L+ P
Sbjct: 465 RISFAKGWGPCYSRQFITSCPCWLEILLNNP 495
>sp|O35182|SMAD6_MOUSE Mothers against decapentaplegic homolog 6 OS=Mus musculus GN=Smad6
PE=1 SV=1
Length = 495
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHLH 103
R+SF KGWG Y RQ +TS PCW+EI L+
Sbjct: 464 RISFAKGWGPCYSRQFITSCPCWLEILLN 492
>sp|Q9W734|SMAD6_CHICK Mothers against decapentaplegic homolog 6 OS=Gallus gallus GN=SMAD6
PE=2 SV=1
Length = 431
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEIHL 102
R+SF KGWG Y RQ +TS PCW+EI L
Sbjct: 400 RISFAKGWGPCYSRQFITSCPCWLEILL 427
>sp|O15105|SMAD7_HUMAN Mothers against decapentaplegic homolog 7 OS=Homo sapiens GN=SMAD7
PE=1 SV=1
Length = 426
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEI 100
++SFVKGWG Y RQ ++S PCW+E+
Sbjct: 396 QISFVKGWGQCYTRQFISSCPCWLEV 421
>sp|O88406|SMAD7_RAT Mothers against decapentaplegic homolog 7 OS=Rattus norvegicus
GN=Smad7 PE=2 SV=2
Length = 426
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEI 100
++SFVKGWG Y RQ ++S PCW+E+
Sbjct: 396 QISFVKGWGQCYTRQFISSCPCWLEV 421
>sp|O35253|SMAD7_MOUSE Mothers against decapentaplegic homolog 7 OS=Mus musculus GN=Smad7
PE=1 SV=1
Length = 426
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 75 RMSFVKGWGAEYHRQDVTSTPCWIEI 100
++SFVKGWG Y RQ ++S PCW+E+
Sbjct: 396 QISFVKGWGQCYTRQFISSCPCWLEV 421
>sp|P54148|Y537_SYNY3 Putative ammonium transporter sll0537 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=sll0537 PE=3 SV=1
Length = 541
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 30 LSFFTQRPIFCIRNKCNRTE--IPFAVKVPRQFSLSVIILWYFVLISRMSFVKG--WGAE 85
L FF Q C+ + R++ I A+K F +SV + W F +G WG
Sbjct: 15 LVFFMQAGFMCLESGLTRSKNSINVAIKNFADFGISVALFWSFGFSIMFGLSQGGWWGTG 74
Query: 86 YHRQDVTSTP 95
Y DV P
Sbjct: 75 YSFVDVGGEP 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.140 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,606,461
Number of Sequences: 539616
Number of extensions: 1470168
Number of successful extensions: 3236
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3195
Number of HSP's gapped (non-prelim): 43
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)