BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11637
(67 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|66519335|ref|XP_624125.1| PREDICTED: DNA excision repair protein haywire [Apis mellifera]
Length = 795
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 322 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 381
Query: 61 NSGV 64
NSGV
Sbjct: 382 NSGV 385
>gi|383849852|ref|XP_003700549.1| PREDICTED: DNA excision repair protein haywire-like [Megachile
rotundata]
Length = 788
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 321 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 380
Query: 61 NSGV 64
NSGV
Sbjct: 381 NSGV 384
>gi|380015695|ref|XP_003691833.1| PREDICTED: DNA excision repair protein haywire-like isoform 2 [Apis
florea]
Length = 800
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 327 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 386
Query: 61 NSGV 64
NSGV
Sbjct: 387 NSGV 390
>gi|380015693|ref|XP_003691832.1| PREDICTED: DNA excision repair protein haywire-like isoform 1 [Apis
florea]
Length = 795
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 322 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 381
Query: 61 NSGV 64
NSGV
Sbjct: 382 NSGV 385
>gi|350412751|ref|XP_003489749.1| PREDICTED: DNA excision repair protein haywire-like isoform 2
[Bombus impatiens]
Length = 804
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 331 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 390
Query: 61 NSGV 64
NSGV
Sbjct: 391 NSGV 394
>gi|350412749|ref|XP_003489748.1| PREDICTED: DNA excision repair protein haywire-like isoform 1
[Bombus impatiens]
Length = 795
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 322 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 381
Query: 61 NSGV 64
NSGV
Sbjct: 382 NSGV 385
>gi|340720531|ref|XP_003398689.1| PREDICTED: DNA excision repair protein haywire-like [Bombus
terrestris]
Length = 795
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 322 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 381
Query: 61 NSGV 64
NSGV
Sbjct: 382 NSGV 385
>gi|332022982|gb|EGI63247.1| DNA excision repair protein haywire [Acromyrmex echinatior]
Length = 793
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 320 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 379
Query: 61 NSGV 64
NSGV
Sbjct: 380 NSGV 383
>gi|307201000|gb|EFN80971.1| TFIIH basal transcription factor complex helicase XPB subunit
[Harpegnathos saltator]
Length = 737
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 264 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 323
Query: 61 NSGV 64
NSGV
Sbjct: 324 NSGV 327
>gi|307169923|gb|EFN62432.1| DNA excision repair protein haywire [Camponotus floridanus]
Length = 805
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 332 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 391
Query: 61 NSGV 64
NSGV
Sbjct: 392 NSGV 395
>gi|242005969|ref|XP_002423832.1| DNA excision repair protein haywire, putative [Pediculus humanus
corporis]
gi|212507048|gb|EEB11094.1| DNA excision repair protein haywire, putative [Pediculus humanus
corporis]
Length = 794
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 321 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 380
Query: 61 NSGV 64
NSGV
Sbjct: 381 NSGV 384
>gi|322785271|gb|EFZ11965.1| hypothetical protein SINV_03753 [Solenopsis invicta]
Length = 586
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 231 INIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 290
Query: 61 NSGV 64
NSGV
Sbjct: 291 NSGV 294
>gi|15292261|gb|AAK93399.1| LD44022p [Drosophila melanogaster]
Length = 798
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 322 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 381
Query: 61 NSGV 64
NSGV
Sbjct: 382 NSGV 385
>gi|904101|gb|AAA74931.1| helicase [Drosophila melanogaster]
Length = 801
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 326 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 385
Query: 61 NSGV 64
NSGV
Sbjct: 386 NSGV 389
>gi|24662247|ref|NP_524020.2| haywire, isoform A [Drosophila melanogaster]
gi|221331068|ref|NP_001137931.1| haywire, isoform B [Drosophila melanogaster]
gi|68068031|sp|Q02870.2|ERCC3_DROME RecName: Full=DNA excision repair protein haywire; AltName:
Full=ATP-dependent DNA helicase hay; AltName:
Full=ERCC-3 homolog protein; AltName: Full=ERCC3Dm
gi|7294816|gb|AAF50150.1| haywire, isoform A [Drosophila melanogaster]
gi|94400453|gb|ABF17890.1| FI01118p [Drosophila melanogaster]
gi|220902549|gb|ACL83286.1| haywire, isoform B [Drosophila melanogaster]
Length = 798
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 322 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 381
Query: 61 NSGV 64
NSGV
Sbjct: 382 NSGV 385
>gi|11079|emb|CAA48386.1| ERCC3 [Drosophila melanogaster]
gi|260979|gb|AAA12421.1| xeroderma pigmentosum complementation-group B correcting gene
homolog [Drosophila melanogaster]
Length = 802
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 326 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 385
Query: 61 NSGV 64
NSGV
Sbjct: 386 NSGV 389
>gi|312383928|gb|EFR28807.1| hypothetical protein AND_02780 [Anopheles darlingi]
Length = 834
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 362 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 421
Query: 61 NSGV 64
NSGV
Sbjct: 422 NSGV 425
>gi|195589302|ref|XP_002084391.1| GD14248 [Drosophila simulans]
gi|194196400|gb|EDX09976.1| GD14248 [Drosophila simulans]
Length = 802
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 326 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 385
Query: 61 NSGV 64
NSGV
Sbjct: 386 NSGV 389
>gi|195493190|ref|XP_002094310.1| GE21750 [Drosophila yakuba]
gi|194180411|gb|EDW94022.1| GE21750 [Drosophila yakuba]
Length = 802
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 326 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 385
Query: 61 NSGV 64
NSGV
Sbjct: 386 NSGV 389
>gi|195442635|ref|XP_002069058.1| GK12273 [Drosophila willistoni]
gi|194165143|gb|EDW80044.1| GK12273 [Drosophila willistoni]
Length = 804
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 329 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 388
Query: 61 NSGV 64
NSGV
Sbjct: 389 NSGV 392
>gi|195378160|ref|XP_002047852.1| GJ13670 [Drosophila virilis]
gi|194155010|gb|EDW70194.1| GJ13670 [Drosophila virilis]
Length = 809
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 333 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 392
Query: 61 NSGV 64
NSGV
Sbjct: 393 NSGV 396
>gi|195326581|ref|XP_002030004.1| GM25215 [Drosophila sechellia]
gi|194118947|gb|EDW40990.1| GM25215 [Drosophila sechellia]
Length = 802
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 326 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 385
Query: 61 NSGV 64
NSGV
Sbjct: 386 NSGV 389
>gi|195171461|ref|XP_002026524.1| GL15471 [Drosophila persimilis]
gi|198465827|ref|XP_001353779.2| GA20769 [Drosophila pseudoobscura pseudoobscura]
gi|194111430|gb|EDW33473.1| GL15471 [Drosophila persimilis]
gi|198150332|gb|EAL29513.2| GA20769 [Drosophila pseudoobscura pseudoobscura]
Length = 797
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 324 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 383
Query: 61 NSGV 64
NSGV
Sbjct: 384 NSGV 387
>gi|195017332|ref|XP_001984577.1| GH14950 [Drosophila grimshawi]
gi|193898059|gb|EDV96925.1| GH14950 [Drosophila grimshawi]
Length = 806
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 331 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 390
Query: 61 NSGV 64
NSGV
Sbjct: 391 NSGV 394
>gi|194868422|ref|XP_001972288.1| GG15440 [Drosophila erecta]
gi|190654071|gb|EDV51314.1| GG15440 [Drosophila erecta]
Length = 802
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 326 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 385
Query: 61 NSGV 64
NSGV
Sbjct: 386 NSGV 389
>gi|194751011|ref|XP_001957820.1| GF10598 [Drosophila ananassae]
gi|190625102|gb|EDV40626.1| GF10598 [Drosophila ananassae]
Length = 803
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 327 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 386
Query: 61 NSGV 64
NSGV
Sbjct: 387 NSGV 390
>gi|170064904|ref|XP_001867720.1| TFIIH basal transcription factor complex helicase XPB subunit
[Culex quinquefasciatus]
gi|167882123|gb|EDS45506.1| TFIIH basal transcription factor complex helicase XPB subunit
[Culex quinquefasciatus]
Length = 544
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 72 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 131
Query: 61 NSGV 64
NSGV
Sbjct: 132 NSGV 135
>gi|170041186|ref|XP_001848354.1| TFIIH basal transcription factor complex helicase XPB subunit
[Culex quinquefasciatus]
gi|167864719|gb|EDS28102.1| TFIIH basal transcription factor complex helicase XPB subunit
[Culex quinquefasciatus]
Length = 810
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 338 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 397
Query: 61 NSGV 64
NSGV
Sbjct: 398 NSGV 401
>gi|158300446|ref|XP_320364.4| AGAP012169-PA [Anopheles gambiae str. PEST]
gi|157013163|gb|EAA00171.4| AGAP012169-PA [Anopheles gambiae str. PEST]
Length = 812
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 340 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 399
Query: 61 NSGV 64
NSGV
Sbjct: 400 NSGV 403
>gi|157134194|ref|XP_001663182.1| rad25/xp-b DNA repair helicase [Aedes aegypti]
gi|108870577|gb|EAT34802.1| AAEL012991-PA [Aedes aegypti]
Length = 810
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 337 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 396
Query: 61 NSGV 64
NSGV
Sbjct: 397 NSGV 400
>gi|157135000|ref|XP_001663396.1| rad25/xp-b DNA repair helicase [Aedes aegypti]
gi|108870345|gb|EAT34570.1| AAEL013205-PA [Aedes aegypti]
Length = 810
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 337 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 396
Query: 61 NSGV 64
NSGV
Sbjct: 397 NSGV 400
>gi|217928279|gb|ACK57262.1| CG8019-like protein, partial [Drosophila affinis]
Length = 324
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 96 INIDLKPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 155
Query: 61 NSGV 64
NSGV
Sbjct: 156 NSGV 159
>gi|91078404|ref|XP_974506.1| PREDICTED: similar to rad25/xp-b DNA repair helicase [Tribolium
castaneum]
gi|270003880|gb|EFA00328.1| hypothetical protein TcasGA2_TC003167 [Tribolium castaneum]
Length = 778
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 59/64 (92%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DL+P+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 303 INVDLRPAAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 362
Query: 61 NSGV 64
NSGV
Sbjct: 363 NSGV 366
>gi|321473939|gb|EFX84905.1| hypothetical protein DAPPUDRAFT_300803 [Daphnia pulex]
Length = 794
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 59/64 (92%), Positives = 63/64 (98%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+AVLRPYQEKSLRKMFGNGRARSG+IVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 317 INIDLRPAAVLRPYQEKSLRKMFGNGRARSGLIVLPCGAGKSLVGVTACCTVRKRALVLC 376
Query: 61 NSGV 64
NSGV
Sbjct: 377 NSGV 380
>gi|427792675|gb|JAA61789.1| Putative rna polymer, partial [Rhipicephalus pulchellus]
Length = 781
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/62 (93%), Positives = 60/62 (96%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+DLKPSA+LRPYQEKSLRKMFGNGR RSGVIVLPCGAGKSLVGVTACCTVRKR LVLCNS
Sbjct: 305 VDLKPSAILRPYQEKSLRKMFGNGRGRSGVIVLPCGAGKSLVGVTACCTVRKRCLVLCNS 364
Query: 63 GV 64
GV
Sbjct: 365 GV 366
>gi|241779174|ref|XP_002399857.1| rad25/xp-B DNA repair helicase, putative [Ixodes scapularis]
gi|215508536|gb|EEC17990.1| rad25/xp-B DNA repair helicase, putative [Ixodes scapularis]
Length = 782
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/62 (93%), Positives = 60/62 (96%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+DLKPSA+LRPYQEKSLRKMFGNGR RSGVIVLPCGAGKSLVGVTACCTVRKR LVLCNS
Sbjct: 307 VDLKPSAILRPYQEKSLRKMFGNGRGRSGVIVLPCGAGKSLVGVTACCTVRKRCLVLCNS 366
Query: 63 GV 64
GV
Sbjct: 367 GV 368
>gi|391336830|ref|XP_003742781.1| PREDICTED: DNA excision repair protein haywire-like [Metaseiulus
occidentalis]
Length = 775
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/64 (90%), Positives = 61/64 (95%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKPSA+LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSL GVTACCTVRKR LVLC
Sbjct: 304 INVDLKPSALLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLTGVTACCTVRKRCLVLC 363
Query: 61 NSGV 64
NSGV
Sbjct: 364 NSGV 367
>gi|357619261|gb|EHJ71905.1| haywire, isoform A [Danaus plexippus]
Length = 1047
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 60/64 (93%), Positives = 62/64 (96%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKRALVLC
Sbjct: 263 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAVCTVRKRALVLC 322
Query: 61 NSGV 64
NSGV
Sbjct: 323 NSGV 326
>gi|328697792|ref|XP_001950547.2| PREDICTED: DNA excision repair protein haywire-like [Acyrthosiphon
pisum]
Length = 750
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A LRPYQEKSLRKMFGN RARSG+IVLPCGAGKSLVGVTACCTVRKRALVLC
Sbjct: 280 INIDLKPQATLRPYQEKSLRKMFGNSRARSGIIVLPCGAGKSLVGVTACCTVRKRALVLC 339
Query: 61 NSGV 64
NS V
Sbjct: 340 NSAV 343
>gi|390346293|ref|XP_794167.3| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like, partial [Strongylocentrotus purpuratus]
Length = 757
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 61/64 (95%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTVRKR +VLC
Sbjct: 319 LSIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTASCTVRKRCMVLC 378
Query: 61 NSGV 64
SGV
Sbjct: 379 TSGV 382
>gi|339233162|ref|XP_003381698.1| DNA excision repair protein haywire [Trichinella spiralis]
gi|316979455|gb|EFV62248.1| DNA excision repair protein haywire [Trichinella spiralis]
Length = 837
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 58/64 (90%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSAVLRPYQEKSLRKMFGN RARSGVIVLPCGAGKSLVGVTACCTV KR L LC
Sbjct: 317 LCIDLKPSAVLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKSLVGVTACCTVNKRCLCLC 376
Query: 61 NSGV 64
NS V
Sbjct: 377 NSNV 380
>gi|198426377|ref|XP_002119177.1| PREDICTED: hypothetical protein [Ciona intestinalis]
Length = 794
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/64 (85%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTVRKR +VLC
Sbjct: 319 LKIDLKPTTVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVRKRCMVLC 378
Query: 61 NSGV 64
SGV
Sbjct: 379 TSGV 382
>gi|194294489|ref|NP_001123567.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 [Ciona intestinalis]
gi|1764011|emb|CAB06045.1| COS41.1 [Ciona intestinalis]
Length = 793
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/64 (85%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTVRKR +VLC
Sbjct: 318 LKIDLKPTTVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVRKRCMVLC 377
Query: 61 NSGV 64
SGV
Sbjct: 378 TSGV 381
>gi|4150989|emb|CAA76655.1| XPB protein [Geodia cydonium]
Length = 810
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 55/64 (85%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+TIDLKP+ +LRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTVRKR LVLC
Sbjct: 325 ITIDLKPTTILRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVRKRCLVLC 384
Query: 61 NSGV 64
S V
Sbjct: 385 TSAV 388
>gi|291225864|ref|XP_002732918.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 3-like [Saccoglossus
kowalevskii]
Length = 824
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 55/64 (85%), Positives = 58/64 (90%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTVRKR +VLC
Sbjct: 351 LNIDLKPMTVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVRKRCMVLC 410
Query: 61 NSGV 64
SGV
Sbjct: 411 TSGV 414
>gi|449506509|ref|XP_002192901.2| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit [Taeniopygia guttata]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 305 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 364
Query: 61 NSGV 64
NS V
Sbjct: 365 NSAV 368
>gi|449270402|gb|EMC81080.1| TFIIH basal transcription factor complex helicase XPB subunit,
partial [Columba livia]
Length = 705
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 228 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 287
Query: 61 NSGV 64
NS V
Sbjct: 288 NSAV 291
>gi|444721477|gb|ELW62213.1| TFIIH basal transcription factor complex helicase XPB subunit
[Tupaia chinensis]
Length = 761
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 296 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 355
Query: 61 NSGV 64
NS V
Sbjct: 356 NSAV 359
>gi|441663476|ref|XP_004091680.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPB subunit [Nomascus leucogenys]
Length = 737
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 261 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 320
Query: 61 NSGV 64
NS V
Sbjct: 321 NSAV 324
>gi|440907187|gb|ELR57360.1| TFIIH basal transcription factor complex helicase XPB subunit [Bos
grunniens mutus]
Length = 778
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 307 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 366
Query: 61 NSGV 64
NS V
Sbjct: 367 NSAV 370
>gi|426337101|ref|XP_004032562.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit [Gorilla gorilla gorilla]
Length = 741
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|426220683|ref|XP_004004543.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit [Ovis aries]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|60653125|gb|AAX29257.1| excision repair cross-complementing rodent repair deficiency
complementation group 3 [synthetic construct]
Length = 783
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|114050909|ref|NP_001039453.1| TFIIH basal transcription factor complex helicase XPB subunit [Bos
taurus]
gi|122134582|sp|Q1RMT1.1|ERCC3_BOVIN RecName: Full=TFIIH basal transcription factor complex helicase XPB
subunit; AltName: Full=DNA excision repair protein
ERCC-3
gi|92097496|gb|AAI14730.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing) [Bos taurus]
gi|296490749|tpg|DAA32862.1| TPA: TFIIH basal transcription factor complex helicase XPB subunit
[Bos taurus]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|73984146|ref|XP_533314.2| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit [Canis lupus familiaris]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|72255519|ref|NP_001026814.1| TFIIH basal transcription factor complex helicase XPB subunit
[Rattus norvegicus]
gi|123781857|sp|Q4G005.1|ERCC3_RAT RecName: Full=TFIIH basal transcription factor complex helicase XPB
subunit; AltName: Full=DNA excision repair protein
ERCC-3
gi|71051759|gb|AAH98856.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 3 [Rattus norvegicus]
gi|149017136|gb|EDL76187.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 [Rattus norvegicus]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|74227659|dbj|BAE35681.1| unnamed protein product [Mus musculus]
Length = 505
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 29 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 88
Query: 61 NSGV 64
NS V
Sbjct: 89 NSAV 92
>gi|74185870|dbj|BAE32801.1| unnamed protein product [Mus musculus]
Length = 783
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 307 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 366
Query: 61 NSGV 64
NS V
Sbjct: 367 NSAV 370
>gi|197101765|ref|NP_001125797.1| TFIIH basal transcription factor complex helicase XPB subunit
[Pongo abelii]
gi|75070714|sp|Q5RA62.1|ERCC3_PONAB RecName: Full=TFIIH basal transcription factor complex helicase XPB
subunit; AltName: Full=DNA excision repair protein
ERCC-3
gi|55729225|emb|CAH91348.1| hypothetical protein [Pongo abelii]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|388454156|ref|NP_001253337.1| TFIIH basal transcription factor complex helicase XPB subunit
[Macaca mulatta]
gi|402892199|ref|XP_003909307.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit isoform 1 [Papio anubis]
gi|62510678|sp|Q60HG1.1|ERCC3_MACFA RecName: Full=TFIIH basal transcription factor complex helicase XPB
subunit; AltName: Full=DNA excision repair protein
ERCC-3
gi|52782215|dbj|BAD51954.1| xeroderma pigmentosum group B complementing factor [Macaca
fascicularis]
gi|380810472|gb|AFE77111.1| TFIIH basal transcription factor complex helicase XPB subunit
[Macaca mulatta]
gi|383412921|gb|AFH29674.1| TFIIH basal transcription factor complex helicase XPB subunit
[Macaca mulatta]
gi|384945792|gb|AFI36501.1| TFIIH basal transcription factor complex helicase XPB subunit
[Macaca mulatta]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|19526800|ref|NP_598419.1| TFIIH basal transcription factor complex helicase XPB subunit [Mus
musculus]
gi|1351441|sp|P49135.1|ERCC3_MOUSE RecName: Full=TFIIH basal transcription factor complex helicase XPB
subunit; AltName: Full=Basic transcription factor 2 89
kDa subunit; Short=BTF2 p89; AltName: Full=DNA excision
repair protein ERCC-3; AltName: Full=DNA repair protein
complementing XP-B cells; AltName: Full=TFIIH 89 kDa
subunit; AltName: Full=Xeroderma pigmentosum group
B-complementing protein
gi|240583|gb|AAB20614.1| DNA repair gene [Mus sp.]
gi|16741581|gb|AAH16595.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 3 [Mus musculus]
gi|20072984|gb|AAH26575.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 3 [Mus musculus]
gi|148664642|gb|EDK97058.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3, isoform CRA_b [Mus musculus]
Length = 783
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 307 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 366
Query: 61 NSGV 64
NS V
Sbjct: 367 NSAV 370
>gi|417404577|gb|JAA49035.1| Putative rna polymer [Desmodus rotundus]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|410968486|ref|XP_003990735.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit [Felis catus]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|403280221|ref|XP_003931626.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like isoform 2 [Saimiri boliviensis boliviensis]
gi|403280223|ref|XP_003931627.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like isoform 3 [Saimiri boliviensis boliviensis]
Length = 718
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 242 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 301
Query: 61 NSGV 64
NS V
Sbjct: 302 NSAV 305
>gi|403280219|ref|XP_003931625.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like isoform 1 [Saimiri boliviensis boliviensis]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|387019089|gb|AFJ51662.1| TFIIH basal transcription factor complex helicase XPB subunit-like
[Crotalus adamanteus]
Length = 779
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 302 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 361
Query: 61 NSGV 64
NS V
Sbjct: 362 NSAV 365
>gi|397516179|ref|XP_003828313.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit isoform 2 [Pan paniscus]
gi|397516181|ref|XP_003828314.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit isoform 3 [Pan paniscus]
Length = 718
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 242 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 301
Query: 61 NSGV 64
NS V
Sbjct: 302 NSAV 305
>gi|397516177|ref|XP_003828312.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit isoform 1 [Pan paniscus]
gi|410208020|gb|JAA01229.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing) [Pan troglodytes]
gi|410306508|gb|JAA31854.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing) [Pan troglodytes]
gi|410342887|gb|JAA40390.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing) [Pan troglodytes]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|395855908|ref|XP_003800388.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit [Otolemur garnettii]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|395519351|ref|XP_003763813.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit [Sarcophilus harrisii]
Length = 783
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|355566063|gb|EHH22492.1| hypothetical protein EGK_05771 [Macaca mulatta]
gi|355751659|gb|EHH55914.1| hypothetical protein EGM_05215 [Macaca fascicularis]
Length = 784
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 308 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 367
Query: 61 NSGV 64
NS V
Sbjct: 368 NSAV 371
>gi|351703141|gb|EHB06060.1| TFIIH basal transcription factor complex helicase XPB subunit
[Heterocephalus glaber]
Length = 751
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 275 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 334
Query: 61 NSGV 64
NS V
Sbjct: 335 NSAV 338
>gi|348586086|ref|XP_003478801.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Cavia porcellus]
Length = 781
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 305 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 364
Query: 61 NSGV 64
NS V
Sbjct: 365 NSAV 368
>gi|344235728|gb|EGV91831.1| TFIIH basal transcription factor complex helicase XPB subunit
[Cricetulus griseus]
Length = 1183
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 781 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 840
Query: 61 NSGV 64
NS V
Sbjct: 841 NSAV 844
>gi|335302531|ref|XP_003133336.2| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Sus scrofa]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|332814347|ref|XP_525907.3| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit [Pan troglodytes]
Length = 768
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 321 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 380
Query: 61 NSGV 64
NS V
Sbjct: 381 NSAV 384
>gi|326922956|ref|XP_003207708.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Meleagris gallopavo]
Length = 733
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 256 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 315
Query: 61 NSGV 64
NS V
Sbjct: 316 NSAV 319
>gi|301783213|ref|XP_002927021.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Ailuropoda melanoleuca]
Length = 778
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 302 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 361
Query: 61 NSGV 64
NS V
Sbjct: 362 NSAV 365
>gi|296204328|ref|XP_002749284.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Callithrix jacchus]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|291391360|ref|XP_002712461.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 3 [Oryctolagus
cuniculus]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|193787880|dbj|BAG53083.1| unnamed protein product [Homo sapiens]
Length = 718
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 242 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 301
Query: 61 NSGV 64
NS V
Sbjct: 302 NSAV 305
>gi|194332647|ref|NP_001123812.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 [Xenopus (Silurana) tropicalis]
gi|189441808|gb|AAI67617.1| LOC100170563 protein [Xenopus (Silurana) tropicalis]
Length = 786
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 308 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 367
Query: 61 NSGV 64
NS V
Sbjct: 368 NSAV 371
>gi|158254380|dbj|BAF83163.1| unnamed protein product [Homo sapiens]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|402892201|ref|XP_003909308.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit isoform 2 [Papio anubis]
Length = 718
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 242 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 301
Query: 61 NSGV 64
NS V
Sbjct: 302 NSAV 305
>gi|148664641|gb|EDK97057.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3, isoform CRA_a [Mus musculus]
Length = 593
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 117 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 176
Query: 61 NSGV 64
NS V
Sbjct: 177 NSAV 180
>gi|126325929|ref|XP_001366494.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit [Monodelphis domestica]
Length = 783
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|120538319|gb|AAI29781.1| LOC100036984 protein [Xenopus laevis]
Length = 772
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 294 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 353
Query: 61 NSGV 64
NS V
Sbjct: 354 NSAV 357
>gi|119615718|gb|EAW95312.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing), isoform CRA_b [Homo sapiens]
gi|119615720|gb|EAW95314.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing), isoform CRA_b [Homo sapiens]
Length = 718
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 242 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 301
Query: 61 NSGV 64
NS V
Sbjct: 302 NSAV 305
>gi|119615717|gb|EAW95311.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing), isoform CRA_a [Homo sapiens]
Length = 796
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 320 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 379
Query: 61 NSGV 64
NS V
Sbjct: 380 NSAV 383
>gi|350538541|ref|NP_001233723.1| TFIIH basal transcription factor complex helicase XPB subunit
[Cricetulus griseus]
gi|117572517|gb|ABK40495.1| DNA helicase [Cricetulus griseus]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|67967581|dbj|BAE00273.1| unnamed protein product [Macaca fascicularis]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|62896489|dbj|BAD96185.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 variant [Homo sapiens]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|57529720|ref|NP_001006523.1| TFIIH basal transcription factor complex helicase XPB subunit
[Gallus gallus]
gi|82082180|sp|Q5ZKK7.1|ERCC3_CHICK RecName: Full=TFIIH basal transcription factor complex helicase XPB
subunit; AltName: Full=DNA excision repair protein
ERCC-3
gi|53130814|emb|CAG31736.1| hypothetical protein RCJMB04_10e8 [Gallus gallus]
Length = 788
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 303 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 362
Query: 61 NSGV 64
NS V
Sbjct: 363 NSAV 366
>gi|4557563|ref|NP_000113.1| TFIIH basal transcription factor complex helicase XPB subunit [Homo
sapiens]
gi|119541|sp|P19447.1|ERCC3_HUMAN RecName: Full=TFIIH basal transcription factor complex helicase XPB
subunit; AltName: Full=Basic transcription factor 2 89
kDa subunit; Short=BTF2 p89; AltName: Full=DNA excision
repair protein ERCC-3; AltName: Full=DNA repair protein
complementing XP-B cells; AltName: Full=TFIIH basal
transcription factor complex 89 kDa subunit; Short=TFIIH
89 kDa subunit; Short=TFIIH p89; AltName: Full=Xeroderma
pigmentosum group B-complementing protein
gi|182179|gb|AAA52396.1| DNA repair helicase [Homo sapiens]
gi|14250706|gb|AAH08820.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing) [Homo sapiens]
gi|24286758|gb|AAN46739.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing) [Homo sapiens]
gi|60656181|gb|AAX32654.1| excision repair cross-complementing rodent repair deficiency
complementation group 3 [synthetic construct]
gi|62822521|gb|AAY15069.1| unknown [Homo sapiens]
gi|119615719|gb|EAW95313.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing), isoform CRA_c [Homo sapiens]
gi|123994253|gb|ABM84728.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing) [synthetic construct]
gi|157928689|gb|ABW03630.1| excision repair cross-complementing rodent repair deficiency,
complementation group 3 (xeroderma pigmentosum group B
complementing) [synthetic construct]
gi|168277380|dbj|BAG10668.1| TFIIH basal transcription factor complex helicase XPB subunit
[synthetic construct]
Length = 782
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|193787168|dbj|BAG52374.1| unnamed protein product [Homo sapiens]
Length = 718
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 242 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAVCTVRKRCLVLG 301
Query: 61 NSGV 64
NS V
Sbjct: 302 NSAV 305
>gi|432851969|ref|XP_004067131.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Oryzias latipes]
Length = 783
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 IAIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSSV 369
>gi|47205016|emb|CAF93977.1| unnamed protein product [Tetraodon nigroviridis]
Length = 841
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 364 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 423
Query: 61 NSGV 64
NS V
Sbjct: 424 NSSV 427
>gi|410912458|ref|XP_003969706.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Takifugu rubripes]
Length = 781
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 304 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 363
Query: 61 NSGV 64
NS V
Sbjct: 364 NSSV 367
>gi|348516499|ref|XP_003445776.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like isoform 2 [Oreochromis niloticus]
Length = 784
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 307 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 366
Query: 61 NSGV 64
NS V
Sbjct: 367 NSSV 370
>gi|348516497|ref|XP_003445775.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like isoform 1 [Oreochromis niloticus]
Length = 783
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSSV 369
>gi|196001637|ref|XP_002110686.1| hypothetical protein TRIADDRAFT_22911 [Trichoplax adhaerens]
gi|190586637|gb|EDV26690.1| hypothetical protein TRIADDRAFT_22911, partial [Trichoplax
adhaerens]
Length = 704
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 60/64 (93%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++IDL+P+ +LRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTV+KR LVLC
Sbjct: 230 ISIDLRPTTILRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVKKRCLVLC 289
Query: 61 NSGV 64
SGV
Sbjct: 290 TSGV 293
>gi|449685455|ref|XP_004210899.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Hydra magnipapillata]
Length = 526
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/64 (84%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKPS +LRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTVRK+ LVLC
Sbjct: 264 INMDLKPSTLLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVRKKCLVLC 323
Query: 61 NSGV 64
SGV
Sbjct: 324 TSGV 327
>gi|443733454|gb|ELU17809.1| hypothetical protein CAPTEDRAFT_153297 [Capitella teleta]
Length = 739
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKPS VLRPYQEKSLRKMFGNGRARSG+IVLPCGAGK+LVGVTA CTV+KR +VLC
Sbjct: 266 VNMDLKPSTVLRPYQEKSLRKMFGNGRARSGIIVLPCGAGKTLVGVTAACTVKKRCMVLC 325
Query: 61 NSGV 64
SGV
Sbjct: 326 TSGV 329
>gi|42415513|ref|NP_963876.1| TFIIH basal transcription factor complex helicase XPB subunit
[Danio rerio]
gi|82241436|sp|Q7ZVV1.1|ERCC3_DANRE RecName: Full=TFIIH basal transcription factor complex helicase XPB
subunit; AltName: Full=DNA excision repair protein
ERCC-3
gi|28277642|gb|AAH45400.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 3 [Danio rerio]
gi|182892000|gb|AAI65665.1| Ercc3 protein [Danio rerio]
Length = 782
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 305 INMDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 364
Query: 61 NSGV 64
NS V
Sbjct: 365 NSSV 368
>gi|340379126|ref|XP_003388078.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Amphimedon queenslandica]
Length = 794
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 58/64 (90%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +LRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTVRKR +VLC
Sbjct: 310 INIDLKPTTILRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVRKRCMVLC 369
Query: 61 NSGV 64
S V
Sbjct: 370 TSAV 373
>gi|344290062|ref|XP_003416758.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Loxodonta africana]
Length = 782
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 58/64 (90%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTV KR LVL
Sbjct: 306 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVHKRCLVLG 365
Query: 61 NSGV 64
NS V
Sbjct: 366 NSAV 369
>gi|260821664|ref|XP_002606152.1| hypothetical protein BRAFLDRAFT_126483 [Branchiostoma floridae]
gi|229291491|gb|EEN62162.1| hypothetical protein BRAFLDRAFT_126483 [Branchiostoma floridae]
Length = 798
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 58/64 (90%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +LRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTVRKR +VLC
Sbjct: 326 IPIDLKPNTILRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVRKRCIVLC 385
Query: 61 NSGV 64
S V
Sbjct: 386 TSAV 389
>gi|194222122|ref|XP_001488557.2| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Equus caballus]
Length = 983
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL
Sbjct: 507 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLG 566
Query: 61 NSGV 64
NS V
Sbjct: 567 NSAV 570
>gi|431912953|gb|ELK14778.1| TFIIH basal transcription factor complex helicase XPB subunit
[Pteropus alecto]
Length = 834
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 55/64 (85%), Positives = 58/64 (90%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CT+RKR LVL
Sbjct: 358 INIGLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTIRKRCLVLG 417
Query: 61 NSGV 64
NS V
Sbjct: 418 NSAV 421
>gi|405957836|gb|EKC24016.1| TFIIH basal transcription factor complex helicase XPB subunit
[Crassostrea gigas]
Length = 493
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 55/62 (88%), Positives = 57/62 (91%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
IDLKPS VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CTVRKRA+ L S
Sbjct: 12 IDLKPSTVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVRKRAICLATS 71
Query: 63 GV 64
GV
Sbjct: 72 GV 73
>gi|327282808|ref|XP_003226134.1| PREDICTED: TFIIH basal transcription factor complex helicase XPB
subunit-like [Anolis carolinensis]
Length = 781
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 58/64 (90%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA TVRKR LVL
Sbjct: 304 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAASTVRKRCLVLG 363
Query: 61 NSGV 64
NS V
Sbjct: 364 NSAV 367
>gi|320167881|gb|EFW44780.1| DNA repair helicase RAD25 [Capsaspora owczarzaki ATCC 30864]
Length = 739
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 57/64 (89%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP A LRPYQEKSL KMFGNGRARSGVIVLPCGAGK+LVGVTA CTV+KR LVLC
Sbjct: 246 LDLDLKPIATLRPYQEKSLNKMFGNGRARSGVIVLPCGAGKTLVGVTATCTVKKRTLVLC 305
Query: 61 NSGV 64
SGV
Sbjct: 306 TSGV 309
>gi|320164128|gb|EFW41027.1| transcription factor IIH subunit [Capsaspora owczarzaki ATCC 30864]
Length = 892
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 57/64 (89%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP A LRPYQEKSL KMFGNGRARSGVIVLPCGAGK+LVGVTA CTV+KR LVLC
Sbjct: 399 LDLDLKPIATLRPYQEKSLNKMFGNGRARSGVIVLPCGAGKTLVGVTATCTVKKRTLVLC 458
Query: 61 NSGV 64
SGV
Sbjct: 459 TSGV 462
>gi|313230223|emb|CBY07927.1| unnamed protein product [Oikopleura dioica]
Length = 792
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/64 (79%), Positives = 57/64 (89%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ LRPYQEKSL+KMFGNGRARSGVIVLPCGAGK+L GVTAC TVRKR ++LC
Sbjct: 312 LPIDLKPTTTLRPYQEKSLKKMFGNGRARSGVIVLPCGAGKTLTGVTACTTVRKRCVILC 371
Query: 61 NSGV 64
SGV
Sbjct: 372 TSGV 375
>gi|349605790|gb|AEQ00905.1| TFIIH basal transcription factor complex helicase XPB
subunit-like protein, partial [Equus caballus]
Length = 372
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 58/64 (90%), Gaps = 1/64 (1%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAG SLVGVTA CTVRKR LVL
Sbjct: 33 INIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAG-SLVGVTAACTVRKRCLVLG 91
Query: 61 NSGV 64
NS V
Sbjct: 92 NSAV 95
>gi|360044168|emb|CCD81715.1| putative rad25/xp-B DNA repair helicase [Schistosoma mansoni]
Length = 769
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/62 (83%), Positives = 54/62 (87%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
IDLK S LRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CT+RK VLC S
Sbjct: 335 IDLKASTTLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTIRKPTFVLCTS 394
Query: 63 GV 64
GV
Sbjct: 395 GV 396
>gi|256085925|ref|XP_002579160.1| rad25/xp-B DNA repair helicase [Schistosoma mansoni]
Length = 722
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/62 (83%), Positives = 54/62 (87%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
IDLK S LRPYQEKSLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CT+RK VLC S
Sbjct: 335 IDLKASTTLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTIRKPTFVLCTS 394
Query: 63 GV 64
GV
Sbjct: 395 GV 396
>gi|385302856|gb|EIF46964.1| dna repair helicase rad25 [Dekkera bruxellensis AWRI1499]
Length = 273
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/64 (76%), Positives = 56/64 (87%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK A+VLC
Sbjct: 89 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSAIVLC 148
Query: 61 NSGV 64
S V
Sbjct: 149 TSSV 152
>gi|449016491|dbj|BAM79893.1| DNA repair helicase rad25 [Cyanidioschyzon merolae strain 10D]
Length = 967
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/64 (76%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRARSGVIVLPCGAGK+LVGVTACCT++K L+LC
Sbjct: 462 IVIDLKPQTRIRPYQEKSLAKMFGNGRARSGVIVLPCGAGKTLVGVTACCTIKKTCLILC 521
Query: 61 NSGV 64
S V
Sbjct: 522 TSAV 525
>gi|353237278|emb|CCA69255.1| probable SSL2-DNA helicase [Piriformospora indica DSM 11827]
Length = 837
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 335 LDIDLKPATTIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 394
Query: 61 NSGVVF 66
S VF
Sbjct: 395 TSSYVF 400
>gi|393241520|gb|EJD49042.1| DNA repair helicase rad25 [Auricularia delicata TFB-10046 SS5]
Length = 873
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 56/64 (87%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ V+RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 359 LDIDLKPATVIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 418
Query: 61 NSGV 64
S V
Sbjct: 419 TSAV 422
>gi|149246257|ref|XP_001527598.1| DNA repair helicase RAD25 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447552|gb|EDK41940.1| DNA repair helicase RAD25 [Lodderomyces elongisporus NRRL YB-4239]
Length = 890
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 49/64 (76%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CTVRK +VLC
Sbjct: 366 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTVRKSVIVLC 425
Query: 61 NSGV 64
S V
Sbjct: 426 TSSV 429
>gi|190348816|gb|EDK41352.2| hypothetical protein PGUG_05450 [Meyerozyma guilliermondii ATCC
6260]
Length = 840
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 351 LNIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 410
Query: 61 NSGV 64
S V
Sbjct: 411 TSSV 414
>gi|146412918|ref|XP_001482430.1| hypothetical protein PGUG_05450 [Meyerozyma guilliermondii ATCC
6260]
Length = 840
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 351 LNIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 410
Query: 61 NSGV 64
S V
Sbjct: 411 TSSV 414
>gi|367010132|ref|XP_003679567.1| hypothetical protein TDEL_0B02270 [Torulaspora delbrueckii]
gi|359747225|emb|CCE90356.1| hypothetical protein TDEL_0B02270 [Torulaspora delbrueckii]
Length = 842
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 56/64 (87%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K A+VLC
Sbjct: 351 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSAIVLC 410
Query: 61 NSGV 64
S V
Sbjct: 411 TSSV 414
>gi|448508504|ref|XP_003865944.1| hypothetical protein CORT_0A01110 [Candida orthopsilosis Co 90-125]
gi|380350282|emb|CCG20503.1| hypothetical protein CORT_0A01110 [Candida orthopsilosis Co 90-125]
Length = 848
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 343 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 402
Query: 61 NSGV 64
S V
Sbjct: 403 TSSV 406
>gi|354544829|emb|CCE41554.1| hypothetical protein CPAR2_801060 [Candida parapsilosis]
Length = 857
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 343 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 402
Query: 61 NSGV 64
S V
Sbjct: 403 TSSV 406
>gi|344304136|gb|EGW34385.1| DNA repair helicase RAD25 [Spathaspora passalidarum NRRL Y-27907]
Length = 842
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 346 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 405
Query: 61 NSGV 64
S V
Sbjct: 406 TSSV 409
>gi|344233375|gb|EGV65247.1| DNA repair helicase rad25 [Candida tenuis ATCC 10573]
Length = 829
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 338 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 397
Query: 61 NSGV 64
S V
Sbjct: 398 TSSV 401
>gi|320583620|gb|EFW97833.1| Component of the holoenzyme form of RNA polymerase transcription
factor TFIIH [Ogataea parapolymorpha DL-1]
Length = 511
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 16 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 75
Query: 61 NSGV 64
S V
Sbjct: 76 TSSV 79
>gi|255722173|ref|XP_002546021.1| DNA repair helicase RAD25 [Candida tropicalis MYA-3404]
gi|240136510|gb|EER36063.1| DNA repair helicase RAD25 [Candida tropicalis MYA-3404]
Length = 846
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 347 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 406
Query: 61 NSGV 64
S V
Sbjct: 407 TSSV 410
>gi|238879758|gb|EEQ43396.1| DNA repair helicase RAD25 [Candida albicans WO-1]
Length = 843
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 345 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 404
Query: 61 NSGV 64
S V
Sbjct: 405 TSSV 408
>gi|241958282|ref|XP_002421860.1| DNA repair helicase, putative [Candida dubliniensis CD36]
gi|223645205|emb|CAX39804.1| DNA repair helicase, putative [Candida dubliniensis CD36]
Length = 846
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 348 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 407
Query: 61 NSGV 64
S V
Sbjct: 408 TSSV 411
>gi|150864721|ref|XP_001383669.2| DNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149385977|gb|ABN65640.2| DNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 838
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 346 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 405
Query: 61 NSGV 64
S V
Sbjct: 406 TSSV 409
>gi|68480483|ref|XP_715839.1| hypothetical protein CaO19.10376 [Candida albicans SC5314]
gi|68480588|ref|XP_715788.1| hypothetical protein CaO19.2857 [Candida albicans SC5314]
gi|46437427|gb|EAK96774.1| hypothetical protein CaO19.2857 [Candida albicans SC5314]
gi|46437480|gb|EAK96826.1| hypothetical protein CaO19.10376 [Candida albicans SC5314]
Length = 843
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 345 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 404
Query: 61 NSGV 64
S V
Sbjct: 405 TSSV 408
>gi|406603748|emb|CCH44773.1| DNA excision repair protein [Wickerhamomyces ciferrii]
Length = 831
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 337 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSTIVLC 396
Query: 61 NSGV 64
S V
Sbjct: 397 TSSV 400
>gi|294657393|ref|XP_459707.2| DEHA2E09174p [Debaryomyces hansenii CBS767]
gi|199432659|emb|CAG87943.2| DEHA2E09174p [Debaryomyces hansenii CBS767]
Length = 852
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 355 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 414
Query: 61 NSGV 64
S V
Sbjct: 415 TSSV 418
>gi|395332204|gb|EJF64583.1| DNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 862
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 352 LEIDLKPSTVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 411
Query: 61 NSGV 64
S V
Sbjct: 412 TSSV 415
>gi|449543176|gb|EMD34153.1| hypothetical protein CERSUDRAFT_117644 [Ceriporiopsis subvermispora
B]
Length = 862
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 352 LDIDLKPSTVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 411
Query: 61 NSGV 64
S V
Sbjct: 412 TSSV 415
>gi|409048592|gb|EKM58070.1| hypothetical protein PHACADRAFT_252066 [Phanerochaete carnosa
HHB-10118-sp]
Length = 835
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 327 LDIDLKPSTVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 386
Query: 61 NSGV 64
S V
Sbjct: 387 TSSV 390
>gi|403412105|emb|CCL98805.1| predicted protein [Fibroporia radiculosa]
Length = 860
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 354 LDIDLKPSTVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 413
Query: 61 NSGV 64
S V
Sbjct: 414 TSSV 417
>gi|388582732|gb|EIM23036.1| DNA repair helicase rad25 [Wallemia sebi CBS 633.66]
Length = 772
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP V+RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 272 LDIDLKPVTVIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVLVLC 331
Query: 61 NSGV 64
S V
Sbjct: 332 TSSV 335
>gi|384494451|gb|EIE84942.1| hypothetical protein RO3G_09652 [Rhizopus delemar RA 99-880]
Length = 831
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 328 LEIDLKPTTTIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 387
Query: 61 NSGV 64
S V
Sbjct: 388 TSSV 391
>gi|330791017|ref|XP_003283591.1| hypothetical protein DICPUDRAFT_96425 [Dictyostelium purpureum]
gi|325086451|gb|EGC39840.1| hypothetical protein DICPUDRAFT_96425 [Dictyostelium purpureum]
Length = 792
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++RPYQEKSL KMFGNGRARSG+IVLPCGAGKSL G+TA CTV+K LVLC
Sbjct: 306 LNIDLKPTTMIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLSGITAACTVKKSILVLC 365
Query: 61 NSGV 64
S V
Sbjct: 366 TSAV 369
>gi|281201244|gb|EFA75456.1| transcription factor IIH subunit [Polysphondylium pallidum PN500]
Length = 690
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++RPYQEKSL KMFGNGRARSG+IVLPCGAGKSL G+TA CTV+K LVLC
Sbjct: 209 LAIDLKPTTMIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLSGITAACTVKKSILVLC 268
Query: 61 NSGV 64
S V
Sbjct: 269 TSAV 272
>gi|66828931|ref|XP_647819.1| transcription factor IIH subunit [Dictyostelium discoideum AX4]
gi|74955815|sp|O00835.1|ERCC3_DICDI RecName: Full=TFIIH basal transcription factor complex helicase
repB subunit; AltName: Full=DNA excision repair
cross-complementing protein-3 homolog; AltName: Full=DNA
repair helicase repB; AltName: Full=DNA repair protein B
gi|2058508|gb|AAB62732.1| RepB [Dictyostelium discoideum]
gi|60469985|gb|EAL67966.1| transcription factor IIH subunit [Dictyostelium discoideum AX4]
Length = 800
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++RPYQEKSL KMFGNGRARSG+IVLPCGAGKSL G+TA CTV+K LVLC
Sbjct: 308 LNIDLKPTTMIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLSGITAACTVKKSILVLC 367
Query: 61 NSGV 64
S V
Sbjct: 368 TSAV 371
>gi|260942042|ref|XP_002615187.1| hypothetical protein CLUG_05202 [Clavispora lusitaniae ATCC 42720]
gi|238851610|gb|EEQ41074.1| hypothetical protein CLUG_05202 [Clavispora lusitaniae ATCC 42720]
Length = 846
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSGVIVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 356 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGVIVLPCGAGKTLVGITAACTIKKSVIVLC 415
Query: 61 NSGV 64
S V
Sbjct: 416 TSSV 419
>gi|402224508|gb|EJU04570.1| DNA repair helicase rad25 [Dacryopinax sp. DJM-731 SS1]
Length = 762
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP V+RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 261 LDIDLKPITVIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSTLVLC 320
Query: 61 NSGV 64
S V
Sbjct: 321 TSTV 324
>gi|342321393|gb|EGU13327.1| tRNA Guanine-N1-methyltransferase [Rhodotorula glutinis ATCC
204091]
Length = 1800
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/64 (76%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSA LRPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA T+RK +VLC
Sbjct: 480 LEIDLKPSAALRPYQEKSLGKMFGNGRARSGIIVLPCGAGKTLVGITAATTIRKSCIVLC 539
Query: 61 NSGV 64
S V
Sbjct: 540 TSSV 543
>gi|268572763|ref|XP_002641406.1| Hypothetical protein CBG13269 [Caenorhabditis briggsae]
Length = 789
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/64 (81%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS LRPYQEKSLRKMFGN RARSGVIVLPCGAGK+LVGVTA TV KR LVL
Sbjct: 313 LGIDLKPSTTLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKTLVGVTAVTTVNKRCLVLA 372
Query: 61 NSGV 64
NS V
Sbjct: 373 NSNV 376
>gi|341890534|gb|EGT46469.1| hypothetical protein CAEBREN_17583 [Caenorhabditis brenneri]
Length = 797
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/64 (81%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS LRPYQEKSLRKMFGN RARSGVIVLPCGAGK+LVGVTA TV KR LVL
Sbjct: 305 LGIDLKPSTTLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKTLVGVTAVTTVNKRCLVLA 364
Query: 61 NSGV 64
NS V
Sbjct: 365 NSNV 368
>gi|308483808|ref|XP_003104105.1| hypothetical protein CRE_01011 [Caenorhabditis remanei]
gi|308258413|gb|EFP02366.1| hypothetical protein CRE_01011 [Caenorhabditis remanei]
Length = 797
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/64 (81%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS LRPYQEKSLRKMFGN RARSGVIVLPCGAGK+LVGVTA TV KR LVL
Sbjct: 307 LGIDLKPSTTLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKTLVGVTAVTTVNKRCLVLA 366
Query: 61 NSGV 64
NS V
Sbjct: 367 NSNV 370
>gi|17556358|ref|NP_499487.1| Protein Y66D12A.15 [Caenorhabditis elegans]
gi|15795210|emb|CAC70144.1| Protein Y66D12A.15 [Caenorhabditis elegans]
Length = 789
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/64 (81%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS LRPYQEKSLRKMFGN RARSGVIVLPCGAGK+LVGVTA TV KR LVL
Sbjct: 313 LGIDLKPSTTLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKTLVGVTAVTTVNKRCLVLA 372
Query: 61 NSGV 64
NS V
Sbjct: 373 NSNV 376
>gi|254586097|ref|XP_002498616.1| ZYRO0G14630p [Zygosaccharomyces rouxii]
gi|238941510|emb|CAR29683.1| ZYRO0G14630p [Zygosaccharomyces rouxii]
Length = 857
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 56/64 (87%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K A+VLC
Sbjct: 364 LDMDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSAVVLC 423
Query: 61 NSGV 64
S V
Sbjct: 424 TSSV 427
>gi|403218334|emb|CCK72825.1| hypothetical protein KNAG_0L02070 [Kazachstania naganishii CBS
8797]
Length = 851
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 360 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 419
Query: 61 NSGV 64
S V
Sbjct: 420 TSAV 423
>gi|328865979|gb|EGG14365.1| transcription factor IIH subunit [Dictyostelium fasciculatum]
Length = 810
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++RPYQEKSL KMFGNGRARSG+IVLPCGAGKSL G+TA CTV+K LVLC
Sbjct: 318 LPIDLKPTTMIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLSGITAACTVKKSILVLC 377
Query: 61 NSGV 64
S V
Sbjct: 378 TSAV 381
>gi|45198798|ref|NP_985827.1| AFR280Wp [Ashbya gossypii ATCC 10895]
gi|44984827|gb|AAS53651.1| AFR280Wp [Ashbya gossypii ATCC 10895]
gi|374109058|gb|AEY97964.1| FAFR280Wp [Ashbya gossypii FDAG1]
Length = 830
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 339 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 398
Query: 61 NSGV 64
S V
Sbjct: 399 TSSV 402
>gi|50293447|ref|XP_449135.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528448|emb|CAG62105.1| unnamed protein product [Candida glabrata]
Length = 862
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 372 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 431
Query: 61 NSGV 64
S V
Sbjct: 432 TSSV 435
>gi|448090109|ref|XP_004196988.1| Piso0_004222 [Millerozyma farinosa CBS 7064]
gi|448094493|ref|XP_004198019.1| Piso0_004222 [Millerozyma farinosa CBS 7064]
gi|359378410|emb|CCE84669.1| Piso0_004222 [Millerozyma farinosa CBS 7064]
gi|359379441|emb|CCE83638.1| Piso0_004222 [Millerozyma farinosa CBS 7064]
Length = 849
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 356 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 415
Query: 61 NSGV 64
S V
Sbjct: 416 TSSV 419
>gi|363751417|ref|XP_003645925.1| hypothetical protein Ecym_4025 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889560|gb|AET39108.1| hypothetical protein Ecym_4025 [Eremothecium cymbalariae
DBVPG#7215]
Length = 853
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 358 LEIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 417
Query: 61 NSGV 64
S V
Sbjct: 418 TSSV 421
>gi|426199291|gb|EKV49216.1| hypothetical protein AGABI2DRAFT_218349 [Agaricus bisporus var.
bisporus H97]
Length = 855
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 350 LDIDLKPATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 409
Query: 61 NSGV 64
S V
Sbjct: 410 TSSV 413
>gi|409078300|gb|EKM78663.1| hypothetical protein AGABI1DRAFT_121098 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 848
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 343 LDIDLKPATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 402
Query: 61 NSGV 64
S V
Sbjct: 403 TSSV 406
>gi|389749796|gb|EIM90967.1| DNA repair helicase rad25 [Stereum hirsutum FP-91666 SS1]
Length = 860
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 349 LDIDLKPATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 408
Query: 61 NSGV 64
S V
Sbjct: 409 TSSV 412
>gi|336383510|gb|EGO24659.1| hypothetical protein SERLADRAFT_438280 [Serpula lacrymans var.
lacrymans S7.9]
Length = 845
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 358 LDIDLKPATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 417
Query: 61 NSGV 64
S V
Sbjct: 418 TSSV 421
>gi|336370746|gb|EGN99086.1| hypothetical protein SERLA73DRAFT_168625 [Serpula lacrymans var.
lacrymans S7.3]
Length = 858
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 348 LDIDLKPATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 407
Query: 61 NSGV 64
S V
Sbjct: 408 TSSV 411
>gi|302684387|ref|XP_003031874.1| hypothetical protein SCHCODRAFT_68127 [Schizophyllum commune H4-8]
gi|300105567|gb|EFI96971.1| hypothetical protein SCHCODRAFT_68127 [Schizophyllum commune H4-8]
Length = 849
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 345 LDIDLKPATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 404
Query: 61 NSGV 64
S V
Sbjct: 405 TSSV 408
>gi|170099355|ref|XP_001880896.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644421|gb|EDR08671.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 769
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 254 LDIDLKPATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 313
Query: 61 NSGV 64
S V
Sbjct: 314 TSSV 317
>gi|172327|gb|AAA34942.1| DNA helicase [Saccharomyces cerevisiae]
Length = 843
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 352 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 411
Query: 61 NSGV 64
S V
Sbjct: 412 TSSV 415
>gi|6322048|ref|NP_012123.1| Ssl2p [Saccharomyces cerevisiae S288c]
gi|267033|sp|Q00578.1|RAD25_YEAST RecName: Full=DNA repair helicase RAD25; AltName: Full=General
transcription and DNA repair factor IIH subunit RAD25;
Short=TFIIH subunit RAD25; AltName: Full=Suppressor of
stem-loop mutation 2
gi|172724|gb|AAA35102.1| encodes human ERCC-3 homologue [Saccharomyces cerevisiae]
gi|557780|emb|CAA86135.1| DNA repair helicase [Saccharomyces cerevisiae]
gi|51013217|gb|AAT92902.1| YIL143C [Saccharomyces cerevisiae]
gi|285812511|tpg|DAA08410.1| TPA: Ssl2p [Saccharomyces cerevisiae S288c]
Length = 843
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 352 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 411
Query: 61 NSGV 64
S V
Sbjct: 412 TSSV 415
>gi|401838864|gb|EJT42288.1| SSL2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 872
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 381 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 440
Query: 61 NSGV 64
S V
Sbjct: 441 TSSV 444
>gi|401625330|gb|EJS43343.1| ssl2p [Saccharomyces arboricola H-6]
Length = 843
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 352 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 411
Query: 61 NSGV 64
S V
Sbjct: 412 TSSV 415
>gi|444323403|ref|XP_004182342.1| hypothetical protein TBLA_0I01650 [Tetrapisispora blattae CBS 6284]
gi|387515389|emb|CCH62823.1| hypothetical protein TBLA_0I01650 [Tetrapisispora blattae CBS 6284]
Length = 850
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 359 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 418
Query: 61 NSGV 64
S V
Sbjct: 419 TSSV 422
>gi|365765060|gb|EHN06574.1| Ssl2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 759
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 268 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 327
Query: 61 NSGV 64
S V
Sbjct: 328 TSSV 331
>gi|367001645|ref|XP_003685557.1| hypothetical protein TPHA_0E00270 [Tetrapisispora phaffii CBS 4417]
gi|357523856|emb|CCE63123.1| hypothetical protein TPHA_0E00270 [Tetrapisispora phaffii CBS 4417]
Length = 856
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 365 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 424
Query: 61 NSGV 64
S V
Sbjct: 425 TSSV 428
>gi|365987532|ref|XP_003670597.1| hypothetical protein NDAI_0F00350 [Naumovozyma dairenensis CBS 421]
gi|343769368|emb|CCD25354.1| hypothetical protein NDAI_0F00350 [Naumovozyma dairenensis CBS 421]
Length = 874
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 383 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 442
Query: 61 NSGV 64
S V
Sbjct: 443 TSSV 446
>gi|366995011|ref|XP_003677269.1| hypothetical protein NCAS_0G00290 [Naumovozyma castellii CBS 4309]
gi|342303138|emb|CCC70916.1| hypothetical protein NCAS_0G00290 [Naumovozyma castellii CBS 4309]
Length = 837
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 348 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 407
Query: 61 NSGV 64
S V
Sbjct: 408 TSSV 411
>gi|259147110|emb|CAY80363.1| Ssl2p [Saccharomyces cerevisiae EC1118]
Length = 843
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 352 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 411
Query: 61 NSGV 64
S V
Sbjct: 412 TSSV 415
>gi|255714519|ref|XP_002553541.1| KLTH0E01210p [Lachancea thermotolerans]
gi|238934923|emb|CAR23104.1| KLTH0E01210p [Lachancea thermotolerans CBS 6340]
Length = 839
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 348 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 407
Query: 61 NSGV 64
S V
Sbjct: 408 TSSV 411
>gi|254566415|ref|XP_002490318.1| Component of the holoenzyme form of RNA polymerase transcription
factor TFIIH [Komagataella pastoris GS115]
gi|238030114|emb|CAY68037.1| Component of the holoenzyme form of RNA polymerase transcription
factor TFIIH [Komagataella pastoris GS115]
gi|328350713|emb|CCA37113.1| DNA excision repair protein ERCC-3 [Komagataella pastoris CBS 7435]
Length = 820
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 327 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 386
Query: 61 NSGV 64
S V
Sbjct: 387 TSSV 390
>gi|213407190|ref|XP_002174366.1| transcription factor TFIIH complex ERCC-3 subunit
[Schizosaccharomyces japonicus yFS275]
gi|212002413|gb|EEB08073.1| transcription factor TFIIH complex ERCC-3 subunit
[Schizosaccharomyces japonicus yFS275]
Length = 800
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 312 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 371
Query: 61 NSGV 64
S V
Sbjct: 372 TSSV 375
>gi|190406354|gb|EDV09621.1| DNA repair helicase RAD25 [Saccharomyces cerevisiae RM11-1a]
gi|323354539|gb|EGA86375.1| Ssl2p [Saccharomyces cerevisiae VL3]
Length = 843
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 352 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 411
Query: 61 NSGV 64
S V
Sbjct: 412 TSSV 415
>gi|156845686|ref|XP_001645733.1| hypothetical protein Kpol_1043p66 [Vanderwaltozyma polyspora DSM
70294]
gi|156116400|gb|EDO17875.1| hypothetical protein Kpol_1043p66 [Vanderwaltozyma polyspora DSM
70294]
Length = 856
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 365 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 424
Query: 61 NSGV 64
S V
Sbjct: 425 TSSV 428
>gi|151943023|gb|EDN61358.1| DNA helicase [Saccharomyces cerevisiae YJM789]
gi|256270224|gb|EEU05444.1| Ssl2p [Saccharomyces cerevisiae JAY291]
gi|349578814|dbj|GAA23978.1| K7_Ssl2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298773|gb|EIW09869.1| Ssl2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 843
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 352 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 411
Query: 61 NSGV 64
S V
Sbjct: 412 TSSV 415
>gi|50309063|ref|XP_454537.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643672|emb|CAG99624.1| KLLA0E13025p [Kluyveromyces lactis]
Length = 858
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 366 LDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 425
Query: 61 NSGV 64
S V
Sbjct: 426 TSSV 429
>gi|19114386|ref|NP_593474.1| transcription factor TFIIH complex ERCC-3 subunit
[Schizosaccharomyces pombe 972h-]
gi|46395601|sp|O13768.1|ERCC3_SCHPO RecName: Full=Probable DNA repair helicase ercc3
gi|2370478|emb|CAB11506.1| transcription factor TFIIH complex ERCC-3 subunit
[Schizosaccharomyces pombe]
Length = 804
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 314 LPIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 373
Query: 61 NSGV 64
S V
Sbjct: 374 TSSV 377
>gi|406700028|gb|EKD03215.1| general RNA polymerase II transcription factor [Trichosporon asahii
var. asahii CBS 8904]
Length = 874
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK ALVLC
Sbjct: 337 LDIQLKPMTVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSALVLC 396
Query: 61 NSGV 64
S V
Sbjct: 397 TSAV 400
>gi|401883704|gb|EJT47899.1| general RNA polymerase II transcription factor [Trichosporon asahii
var. asahii CBS 2479]
Length = 874
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK ALVLC
Sbjct: 337 LDIQLKPMTVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSALVLC 396
Query: 61 NSGV 64
S V
Sbjct: 397 TSAV 400
>gi|410078858|ref|XP_003957010.1| hypothetical protein KAFR_0D02280 [Kazachstania africana CBS 2517]
gi|372463595|emb|CCF57875.1| hypothetical protein KAFR_0D02280 [Kazachstania africana CBS 2517]
Length = 833
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 342 LGIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 401
Query: 61 NSGV 64
S V
Sbjct: 402 TSSV 405
>gi|358058547|dbj|GAA95510.1| hypothetical protein E5Q_02165 [Mixia osmundae IAM 14324]
Length = 966
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +R YQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 455 LEIDLKPTTRIRSYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVLVLC 514
Query: 61 NSGV 64
SGV
Sbjct: 515 TSGV 518
>gi|390594292|gb|EIN03704.1| DNA helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 866
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K VLC
Sbjct: 355 LDIDLKPATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCFVLC 414
Query: 61 NSGV 64
S V
Sbjct: 415 TSSV 418
>gi|169859418|ref|XP_001836349.1| DNA helicase [Coprinopsis cinerea okayama7#130]
gi|116502638|gb|EAU85533.1| DNA helicase [Coprinopsis cinerea okayama7#130]
Length = 848
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 335 LDIDLKPATTIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSTLVLC 394
Query: 61 NSGV 64
S V
Sbjct: 395 TSSV 398
>gi|358332745|dbj|GAA39781.2| DNA excision repair protein ERCC-3 [Clonorchis sinensis]
Length = 931
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 50/64 (78%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLK S LRPYQE+SLRKMFGNGRARSGVIVLPCGAGK+LVGVTA CT+RK VL
Sbjct: 445 IAIDLKASTSLRPYQERSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTIRKPTFVLG 504
Query: 61 NSGV 64
SGV
Sbjct: 505 TSGV 508
>gi|324505126|gb|ADY42208.1| TFIIH basal transcription factor complex helicase XPB subunit
[Ascaris suum]
Length = 798
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/64 (79%), Positives = 53/64 (82%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS LRPYQEKSLRKMFGN RARSGVIVLPCGAGK+LVGVTA TV KR LVL
Sbjct: 316 LGIDLKPSTTLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKTLVGVTAATTVNKRCLVLA 375
Query: 61 NSGV 64
S V
Sbjct: 376 TSNV 379
>gi|50546603|ref|XP_500771.1| YALI0B11726p [Yarrowia lipolytica]
gi|49646637|emb|CAG83021.1| YALI0B11726p [Yarrowia lipolytica CLIB122]
Length = 827
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLK S +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 338 LDIDLKSSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLC 397
Query: 61 NSGV 64
S V
Sbjct: 398 TSSV 401
>gi|58259069|ref|XP_566947.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. neoformans JEC21]
gi|57223084|gb|AAW41128.1| general RNA polymerase II transcription factor, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 866
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K ALVLC
Sbjct: 347 LDIQLKPMTVIRPYQEMSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSALVLC 406
Query: 61 NSGV 64
S V
Sbjct: 407 TSAV 410
>gi|405117967|gb|AFR92742.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. grubii H99]
Length = 866
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K ALVLC
Sbjct: 347 LDIQLKPMTVIRPYQEMSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSALVLC 406
Query: 61 NSGV 64
S V
Sbjct: 407 TSAV 410
>gi|321249760|ref|XP_003191564.1| general RNA polymerase II transcription factor [Cryptococcus gattii
WM276]
gi|317458031|gb|ADV19777.1| General RNA polymerase II transcription factor, putative
[Cryptococcus gattii WM276]
Length = 866
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K ALVLC
Sbjct: 347 LDIQLKPMTVIRPYQEMSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSALVLC 406
Query: 61 NSGV 64
S V
Sbjct: 407 TSAV 410
>gi|134107131|ref|XP_777878.1| hypothetical protein CNBA5750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260576|gb|EAL23231.1| hypothetical protein CNBA5750 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 866
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K ALVLC
Sbjct: 347 LDIQLKPMTVIRPYQEMSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSALVLC 406
Query: 61 NSGV 64
S V
Sbjct: 407 TSAV 410
>gi|403173052|ref|XP_003332158.2| DNA excision repair protein ERCC-3 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170107|gb|EFP87739.2| DNA excision repair protein ERCC-3 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 980
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA T+RK L LC
Sbjct: 467 LEIDLKPATQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAASTIRKSVLCLC 526
Query: 61 NSGV 64
SGV
Sbjct: 527 TSGV 530
>gi|328858647|gb|EGG07759.1| hypothetical protein MELLADRAFT_85492 [Melampsora larici-populina
98AG31]
Length = 881
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA T+RK L LC
Sbjct: 374 LEIDLKPATQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAASTIRKSVLCLC 433
Query: 61 NSGV 64
SGV
Sbjct: 434 TSGV 437
>gi|392564211|gb|EIW57389.1| DNA helicase [Trametes versicolor FP-101664 SS1]
Length = 859
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS V+R YQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 352 LDIDLKPSTVIRSYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 411
Query: 61 NSGV 64
S V
Sbjct: 412 TSSV 415
>gi|443897666|dbj|GAC75006.1| RNA pRNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, 3'-5' helicase subunit
SSL2olymerase II transcription initiation [Pseudozyma
antarctica T-34]
Length = 925
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 418 LEIDLKPITHIRPYQEKSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 477
Query: 61 NSGV 64
S V
Sbjct: 478 TSSV 481
>gi|388857563|emb|CCF48919.1| probable SSL2-DNA helicase [Ustilago hordei]
Length = 938
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 428 LEIDLKPITHIRPYQEKSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 487
Query: 61 NSGV 64
S V
Sbjct: 488 TSSV 491
>gi|343425159|emb|CBQ68696.1| probable SSL2-DNA helicase [Sporisorium reilianum SRZ2]
Length = 951
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 435 LEIDLKPITHIRPYQEKSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 494
Query: 61 NSGV 64
S V
Sbjct: 495 TSSV 498
>gi|71019971|ref|XP_760216.1| hypothetical protein UM04069.1 [Ustilago maydis 521]
gi|46099785|gb|EAK85018.1| hypothetical protein UM04069.1 [Ustilago maydis 521]
Length = 940
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 425 LEIDLKPITHIRPYQEKSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 484
Query: 61 NSGV 64
S V
Sbjct: 485 TSSV 488
>gi|443918514|gb|ELU38961.1| DNA repair helicase RAD25 [Rhizoctonia solani AG-1 IA]
Length = 823
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVL
Sbjct: 304 LDIDLKPMTSIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSTLVLA 363
Query: 61 NSGV 64
SGV
Sbjct: 364 TSGV 367
>gi|393217046|gb|EJD02536.1| DNA repair helicase rad25 [Fomitiporia mediterranea MF3/22]
Length = 872
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS V+RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVL
Sbjct: 348 LDIDLKPSTVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLA 407
Query: 61 NSGV 64
S V
Sbjct: 408 TSSV 411
>gi|171686848|ref|XP_001908365.1| hypothetical protein [Podospora anserina S mat+]
gi|170943385|emb|CAP69038.1| unnamed protein product [Podospora anserina S mat+]
Length = 859
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 56/64 (87%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ ++RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 348 LEIDLRPNTLIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIRKGVIVLC 407
Query: 61 NSGV 64
S +
Sbjct: 408 TSSM 411
>gi|342877523|gb|EGU78974.1| hypothetical protein FOXB_10508 [Fusarium oxysporum Fo5176]
Length = 756
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 56/64 (87%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT+RK +VLC
Sbjct: 260 LDIDLRPNIQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIRKGVIVLC 319
Query: 61 NSGV 64
+S V
Sbjct: 320 SSSV 323
>gi|392594902|gb|EIW84226.1| DNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 861
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +RPYQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K L LC
Sbjct: 351 LDIDLKPATTIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLCLC 410
Query: 61 NSGV 64
S V
Sbjct: 411 TSSV 414
>gi|345481459|ref|XP_001601816.2| PREDICTED: DNA excision repair protein haywire-like isoform 1
[Nasonia vitripennis]
Length = 809
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/64 (79%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS VLRPYQEKSLRKMFGNGRA GAGKSLVGVTAC TVRKRALVLC
Sbjct: 336 INIDLKPSTVLRPYQEKSLRKMFGNGRAXXXXXXXXIGAGKSLVGVTACSTVRKRALVLC 395
Query: 61 NSGV 64
NSGV
Sbjct: 396 NSGV 399
>gi|345481457|ref|XP_003424374.1| PREDICTED: DNA excision repair protein haywire-like isoform 2
[Nasonia vitripennis]
Length = 802
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/64 (79%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS VLRPYQEKSLRKMFGNGRA GAGKSLVGVTAC TVRKRALVLC
Sbjct: 329 INIDLKPSTVLRPYQEKSLRKMFGNGRAXXXXXXXXIGAGKSLVGVTACSTVRKRALVLC 388
Query: 61 NSGV 64
NSGV
Sbjct: 389 NSGV 392
>gi|302928024|ref|XP_003054618.1| hypothetical protein NECHADRAFT_90467 [Nectria haematococca mpVI
77-13-4]
gi|256735559|gb|EEU48905.1| hypothetical protein NECHADRAFT_90467 [Nectria haematococca mpVI
77-13-4]
Length = 807
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 341 LKIDLRPNTQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKSVIVLC 400
Query: 61 NSGV 64
S V
Sbjct: 401 TSSV 404
>gi|346978860|gb|EGY22312.1| DNA repair helicase RAD25 [Verticillium dahliae VdLs.17]
Length = 792
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P A +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CTV+K +VLC
Sbjct: 328 LEIDLRPGAQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTVKKGVIVLC 387
Query: 61 NSGV 64
S +
Sbjct: 388 TSSM 391
>gi|302417724|ref|XP_003006693.1| DNA repair helicase RAD25 [Verticillium albo-atrum VaMs.102]
gi|261354295|gb|EEY16723.1| DNA repair helicase RAD25 [Verticillium albo-atrum VaMs.102]
Length = 518
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P A +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CTV+K +VLC
Sbjct: 328 LEIDLRPGAQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTVKKGVIVLC 387
Query: 61 NSGV 64
S +
Sbjct: 388 TSSM 391
>gi|430814591|emb|CCJ28199.1| unnamed protein product [Pneumocystis jirovecii]
Length = 801
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +R YQEKSL KMFGNGRARSG+IVLPCG GK+LVG+TA CT++K LVLC
Sbjct: 304 LEIDLKPSTQIRSYQEKSLSKMFGNGRARSGIIVLPCGTGKTLVGITAACTIKKSVLVLC 363
Query: 61 NSGV 64
S V
Sbjct: 364 TSSV 367
>gi|440638918|gb|ELR08837.1| DNA excision repair protein ERCC-3 [Geomyces destructans 20631-21]
Length = 869
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSA +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT+RK ++LC
Sbjct: 368 LEIDLKPSAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIRKGVIILC 427
Query: 61 NSGV 64
S +
Sbjct: 428 TSSM 431
>gi|326436958|gb|EGD82528.1| hypothetical protein PTSG_03178 [Salpingoeca sp. ATCC 50818]
Length = 804
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ LRPYQEKSLRKMF +GRARSG+IVLPCGAGK+L GVTA T+++RA+VLC
Sbjct: 323 LDIDLKPTCRLRPYQEKSLRKMFNHGRARSGIIVLPCGAGKTLTGVTAVSTIKRRAIVLC 382
Query: 61 NSGV 64
S V
Sbjct: 383 TSNV 386
>gi|320586174|gb|EFW98853.1| tfiih complex helicase [Grosmannia clavigera kw1407]
Length = 850
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 347 LDIDLKPNTQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 406
Query: 61 NSGV 64
S +
Sbjct: 407 TSSM 410
>gi|164655445|ref|XP_001728852.1| hypothetical protein MGL_4019 [Malassezia globosa CBS 7966]
gi|159102738|gb|EDP41638.1| hypothetical protein MGL_4019 [Malassezia globosa CBS 7966]
Length = 815
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGN RARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 282 LEIDLKPITHIRPYQEKSLAKMFGNSRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLC 341
Query: 61 NSGV 64
S V
Sbjct: 342 TSSV 345
>gi|429854912|gb|ELA29893.1| DNA repair helicase rad25 [Colletotrichum gloeosporioides Nara gc5]
Length = 826
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P ++RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CTV+K +VLC
Sbjct: 331 LEIDLRPGTLIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTVKKGVIVLC 390
Query: 61 NSGV 64
S +
Sbjct: 391 TSSM 394
>gi|380478617|emb|CCF43492.1| DNA repair helicase RAD25 [Colletotrichum higginsianum]
Length = 439
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P ++RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CTV+K +VLC
Sbjct: 326 LEIDLRPGTLIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTVKKGVIVLC 385
Query: 61 NSGV 64
S +
Sbjct: 386 TSSM 389
>gi|310791605|gb|EFQ27132.1| DNA repair helicase rad25 [Glomerella graminicola M1.001]
Length = 821
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P ++RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CTV+K +VLC
Sbjct: 326 LEIDLRPGTLIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTVKKGVIVLC 385
Query: 61 NSGV 64
S +
Sbjct: 386 TSSM 389
>gi|258571163|ref|XP_002544385.1| DNA repair helicase RAD25 [Uncinocarpus reesii 1704]
gi|237904655|gb|EEP79056.1| DNA repair helicase RAD25 [Uncinocarpus reesii 1704]
Length = 791
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSA +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 288 LDIDLKPSAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 347
Query: 61 NSGV 64
S +
Sbjct: 348 TSSM 351
>gi|367027018|ref|XP_003662793.1| hypothetical protein MYCTH_2303821 [Myceliophthora thermophila ATCC
42464]
gi|347010062|gb|AEO57548.1| hypothetical protein MYCTH_2303821 [Myceliophthora thermophila ATCC
42464]
Length = 863
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 350 LEIDLRPNTQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 409
Query: 61 NSGV 64
S +
Sbjct: 410 TSSM 413
>gi|367050828|ref|XP_003655793.1| hypothetical protein THITE_2119890 [Thielavia terrestris NRRL 8126]
gi|347003057|gb|AEO69457.1| hypothetical protein THITE_2119890 [Thielavia terrestris NRRL 8126]
Length = 861
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 350 LEIDLRPNTQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 409
Query: 61 NSGV 64
S +
Sbjct: 410 TSSM 413
>gi|340905279|gb|EGS17647.1| DNA repair helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 867
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 352 LEIDLRPNTQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 411
Query: 61 NSGV 64
S +
Sbjct: 412 TSSM 415
>gi|116191997|ref|XP_001221811.1| hypothetical protein CHGG_05716 [Chaetomium globosum CBS 148.51]
gi|88181629|gb|EAQ89097.1| hypothetical protein CHGG_05716 [Chaetomium globosum CBS 148.51]
Length = 808
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 350 LEIDLRPNTQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 409
Query: 61 NSGV 64
S +
Sbjct: 410 TSSM 413
>gi|322707230|gb|EFY98809.1| DNA repair helicase RAD25 [Metarhizium anisopliae ARSEF 23]
Length = 827
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 329 LEIDLKPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIVLC 388
Query: 61 NSGV 64
S +
Sbjct: 389 TSSM 392
>gi|322701630|gb|EFY93379.1| DNA repair helicase RAD25 [Metarhizium acridum CQMa 102]
Length = 827
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 329 LEIDLKPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIVLC 388
Query: 61 NSGV 64
S +
Sbjct: 389 TSSM 392
>gi|408399632|gb|EKJ78730.1| hypothetical protein FPSE_01098 [Fusarium pseudograminearum CS3096]
Length = 825
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 331 LDIDLKPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIVLC 390
Query: 61 NSGV 64
S +
Sbjct: 391 TSSM 394
>gi|358391751|gb|EHK41155.1| hypothetical protein TRIATDRAFT_249572 [Trichoderma atroviride IMI
206040]
Length = 801
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 303 LDIDLKPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIVLC 362
Query: 61 NSGV 64
S +
Sbjct: 363 TSSM 366
>gi|358379026|gb|EHK16707.1| hypothetical protein TRIVIDRAFT_41182 [Trichoderma virens Gv29-8]
Length = 834
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 335 LDIDLKPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIVLC 394
Query: 61 NSGV 64
S +
Sbjct: 395 TSSM 398
>gi|342885823|gb|EGU85775.1| hypothetical protein FOXB_03623 [Fusarium oxysporum Fo5176]
Length = 825
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 331 LDIDLKPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIVLC 390
Query: 61 NSGV 64
S +
Sbjct: 391 TSSM 394
>gi|340520673|gb|EGR50909.1| Rad3 protein [Trichoderma reesei QM6a]
Length = 829
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 334 LDIDLKPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIVLC 393
Query: 61 NSGV 64
S +
Sbjct: 394 TSSM 397
>gi|302916051|ref|XP_003051836.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732775|gb|EEU46123.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 802
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 306 LDIDLKPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIVLC 365
Query: 61 NSGV 64
S +
Sbjct: 366 TSSM 369
>gi|46125805|ref|XP_387456.1| hypothetical protein FG07280.1 [Gibberella zeae PH-1]
Length = 872
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 331 LDIDLKPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIVLC 390
Query: 61 NSGV 64
S +
Sbjct: 391 TSSM 394
>gi|361127562|gb|EHK99526.1| putative DNA repair helicase RAD25 [Glarea lozoyensis 74030]
Length = 773
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPSA +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 275 LEIDLKPSAQIRTYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIILC 334
Query: 61 NSGV 64
S +
Sbjct: 335 TSSM 338
>gi|320040710|gb|EFW22643.1| TFIIH complex helicase Ssl2 [Coccidioides posadasii str.
Silveira]
Length = 485
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 20 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 79
Query: 61 NSGV 64
S +
Sbjct: 80 TSSM 83
>gi|303319627|ref|XP_003069813.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240109499|gb|EER27668.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 832
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 329 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 388
Query: 61 NSGV 64
S +
Sbjct: 389 TSSM 392
>gi|119183122|ref|XP_001242631.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392865533|gb|EJB10993.1| DNA repair helicase rad25 [Coccidioides immitis RS]
Length = 832
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 329 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 388
Query: 61 NSGV 64
S +
Sbjct: 389 TSSM 392
>gi|242792361|ref|XP_002481937.1| TFIIH complex helicase Ssl2, putative [Talaromyces stipitatus ATCC
10500]
gi|218718525|gb|EED17945.1| TFIIH complex helicase Ssl2, putative [Talaromyces stipitatus ATCC
10500]
Length = 831
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 322 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 381
Query: 61 NSGV 64
S +
Sbjct: 382 TSSM 385
>gi|212535202|ref|XP_002147757.1| TFIIH complex helicase Ssl2, putative [Talaromyces marneffei ATCC
18224]
gi|210070156|gb|EEA24246.1| TFIIH complex helicase Ssl2, putative [Talaromyces marneffei ATCC
18224]
Length = 832
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 323 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 382
Query: 61 NSGV 64
S +
Sbjct: 383 TSSM 386
>gi|119498889|ref|XP_001266202.1| TFIIH complex helicase Ssl2, putative [Neosartorya fischeri NRRL
181]
gi|119414366|gb|EAW24305.1| TFIIH complex helicase Ssl2, putative [Neosartorya fischeri NRRL
181]
Length = 829
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 327 LDIDLKPNARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 386
Query: 61 NSGV 64
S +
Sbjct: 387 TSSM 390
>gi|121718807|ref|XP_001276200.1| TFIIH complex helicase Ssl2, putative [Aspergillus clavatus NRRL 1]
gi|119404398|gb|EAW14774.1| TFIIH complex helicase Ssl2, putative [Aspergillus clavatus NRRL 1]
Length = 823
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 321 LDIDLKPNARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 380
Query: 61 NSGV 64
S +
Sbjct: 381 TSSM 384
>gi|70985010|ref|XP_748011.1| TFIIH complex helicase Ssl2 [Aspergillus fumigatus Af293]
gi|66845639|gb|EAL85973.1| TFIIH complex helicase Ssl2, putative [Aspergillus fumigatus Af293]
gi|159126065|gb|EDP51181.1| TFIIH complex helicase Ssl2, putative [Aspergillus fumigatus A1163]
Length = 830
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 328 LDIDLKPNARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 387
Query: 61 NSGV 64
S +
Sbjct: 388 TSSM 391
>gi|347831594|emb|CCD47291.1| similar to TFIIH basal transcription factor complex helicase XPB
subunit [Botryotinia fuckeliana]
Length = 845
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+PSA +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 346 LEIDLRPSAQIRHYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 405
Query: 61 NSGV 64
S +
Sbjct: 406 TSSM 409
>gi|156050235|ref|XP_001591079.1| hypothetical protein SS1G_07704 [Sclerotinia sclerotiorum 1980]
gi|154692105|gb|EDN91843.1| hypothetical protein SS1G_07704 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 847
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+PSA +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 348 LEIDLRPSAQIRHYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 407
Query: 61 NSGV 64
S +
Sbjct: 408 TSSM 411
>gi|154317790|ref|XP_001558214.1| hypothetical protein BC1G_02878 [Botryotinia fuckeliana B05.10]
Length = 845
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+PSA +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 346 LEIDLRPSAQIRHYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 405
Query: 61 NSGV 64
S +
Sbjct: 406 TSSM 409
>gi|402594523|gb|EJW88449.1| DNA excision repair protein haywire [Wuchereria bancrofti]
Length = 781
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/64 (78%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLK S LRPYQEKSLRKMFGN RARSGVIVLPCGAGK+LVGVTA TV KR LVL
Sbjct: 299 LGIDLKSSTNLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKTLVGVTAATTVNKRCLVLA 358
Query: 61 NSGV 64
S V
Sbjct: 359 TSNV 362
>gi|393912228|gb|EJD76645.1| helicase, variant [Loa loa]
Length = 606
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/64 (78%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLK S LRPYQEKSLRKMFGN RARSGVIVLPCGAGK+LVGVTA TV KR LVL
Sbjct: 316 LGIDLKSSTNLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKTLVGVTAATTVNKRCLVLA 375
Query: 61 NSGV 64
S V
Sbjct: 376 TSNV 379
>gi|312066345|ref|XP_003136226.1| helicase [Loa loa]
gi|307768612|gb|EFO27846.1| helicase [Loa loa]
Length = 798
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/64 (78%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLK S LRPYQEKSLRKMFGN RARSGVIVLPCGAGK+LVGVTA TV KR LVL
Sbjct: 316 LGIDLKSSTNLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKTLVGVTAATTVNKRCLVLA 375
Query: 61 NSGV 64
S V
Sbjct: 376 TSNV 379
>gi|170581278|ref|XP_001895614.1| helicase [Brugia malayi]
gi|158597374|gb|EDP35540.1| helicase, putative [Brugia malayi]
Length = 798
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/64 (78%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLK S LRPYQEKSLRKMFGN RARSGVIVLPCGAGK+LVGVTA TV KR LVL
Sbjct: 316 LGIDLKSSTNLRPYQEKSLRKMFGNSRARSGVIVLPCGAGKTLVGVTAATTVNKRCLVLA 375
Query: 61 NSGV 64
S V
Sbjct: 376 TSNV 379
>gi|407925762|gb|EKG18743.1| Xeroderma pigmentosum group B protein (XP-B) [Macrophomina
phaseolina MS6]
Length = 763
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 53/62 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ID++P +RPYQE++L KMFGNGRARSG+IVLPCGAGK+LVG+TA CTVRK +VLC
Sbjct: 268 LEIDIRPGVEIRPYQEQALTKMFGNGRARSGIIVLPCGAGKTLVGITAACTVRKGCIVLC 327
Query: 61 NS 62
S
Sbjct: 328 TS 329
>gi|259480979|tpe|CBF74098.1| TPA: component of the holoenzyme form of RNA polymerase
transcription factor (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 818
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 317 LDIDLKPAARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 376
Query: 61 NSGV 64
S +
Sbjct: 377 TSSM 380
>gi|67902428|ref|XP_681470.1| hypothetical protein AN8201.2 [Aspergillus nidulans FGSC A4]
gi|40739655|gb|EAA58845.1| hypothetical protein AN8201.2 [Aspergillus nidulans FGSC A4]
Length = 833
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 332 LDIDLKPAARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 391
Query: 61 NSGV 64
S +
Sbjct: 392 TSSM 395
>gi|392576784|gb|EIW69914.1| hypothetical protein TREMEDRAFT_68365 [Tremella mesenterica DSM
1558]
Length = 867
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP V+R YQE SL KMFGNGRARSG+IVLPCGAGK+LVG+TA CT++K LVLC
Sbjct: 343 LDIQLKPMTVIRSYQETSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSTLVLC 402
Query: 61 NSGV 64
S V
Sbjct: 403 TSAV 406
>gi|325093694|gb|EGC47004.1| DNA repair helicase RAD25 [Ajellomyces capsulatus H88]
Length = 1416
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 283 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 342
Query: 61 NSGV 64
S +
Sbjct: 343 TSSM 346
>gi|240277609|gb|EER41117.1| DNA repair helicase RAD25 [Ajellomyces capsulatus H143]
Length = 1379
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 283 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 342
Query: 61 NSGV 64
S +
Sbjct: 343 TSSM 346
>gi|261202560|ref|XP_002628494.1| DNA repair helicase RAD25 [Ajellomyces dermatitidis SLH14081]
gi|239590591|gb|EEQ73172.1| DNA repair helicase RAD25 [Ajellomyces dermatitidis SLH14081]
gi|239612316|gb|EEQ89303.1| DNA repair helicase RAD25 [Ajellomyces dermatitidis ER-3]
gi|327358169|gb|EGE87026.1| DNA repair helicase RAD25 [Ajellomyces dermatitidis ATCC 18188]
Length = 833
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 328 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 387
Query: 61 NSGV 64
S +
Sbjct: 388 TSSM 391
>gi|226287233|gb|EEH42746.1| DNA repair helicase RAD25 [Paracoccidioides brasiliensis Pb18]
Length = 833
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 328 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 387
Query: 61 NSGV 64
S +
Sbjct: 388 TSSM 391
>gi|295667028|ref|XP_002794064.1| DNA repair helicase RAD25 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277717|gb|EEH33283.1| DNA repair helicase RAD25 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 832
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 327 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 386
Query: 61 NSGV 64
S +
Sbjct: 387 TSSM 390
>gi|225683607|gb|EEH21891.1| TFIIH basal transcription factor complex helicase XPB subunit
[Paracoccidioides brasiliensis Pb03]
Length = 787
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 282 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 341
Query: 61 NSGV 64
S +
Sbjct: 342 TSSM 345
>gi|225557061|gb|EEH05348.1| DNA repair helicase RAD25 [Ajellomyces capsulatus G186AR]
Length = 833
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 328 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 387
Query: 61 NSGV 64
S +
Sbjct: 388 TSSM 391
>gi|154285310|ref|XP_001543450.1| hypothetical protein HCAG_00496 [Ajellomyces capsulatus NAm1]
gi|150407091|gb|EDN02632.1| hypothetical protein HCAG_00496 [Ajellomyces capsulatus NAm1]
Length = 750
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 245 LDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 304
Query: 61 NSGV 64
S +
Sbjct: 305 TSSM 308
>gi|336469324|gb|EGO57486.1| DNA repair helicase RAD25 [Neurospora tetrasperma FGSC 2508]
gi|350291041|gb|EGZ72255.1| DNA repair helicase RAD25 [Neurospora tetrasperma FGSC 2509]
Length = 864
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQE+SL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 356 LEIDLRPNTQIRPYQEQSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 415
Query: 61 NSGV 64
S +
Sbjct: 416 TSSM 419
>gi|336271467|ref|XP_003350492.1| hypothetical protein SMAC_02205 [Sordaria macrospora k-hell]
gi|380090156|emb|CCC11983.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 867
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQE+SL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 359 LEIDLRPNTQIRPYQEQSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 418
Query: 61 NSGV 64
S +
Sbjct: 419 TSSM 422
>gi|85084541|ref|XP_957329.1| DNA repair helicase RAD25 [Neurospora crassa OR74A]
gi|28918419|gb|EAA28093.1| DNA repair helicase RAD25 [Neurospora crassa OR74A]
Length = 862
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQE+SL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 356 LEIDLRPNTQIRPYQEQSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGVIVLC 415
Query: 61 NSGV 64
S +
Sbjct: 416 TSSM 419
>gi|115433138|ref|XP_001216706.1| DNA repair helicase RAD25 [Aspergillus terreus NIH2624]
gi|114189558|gb|EAU31258.1| DNA repair helicase RAD25 [Aspergillus terreus NIH2624]
Length = 839
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 333 LDIDLKPNARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 392
Query: 61 NSGV 64
S +
Sbjct: 393 TSSM 396
>gi|389638922|ref|XP_003717094.1| DNA repair helicase RAD25 [Magnaporthe oryzae 70-15]
gi|351642913|gb|EHA50775.1| DNA repair helicase RAD25 [Magnaporthe oryzae 70-15]
gi|440473086|gb|ELQ41908.1| DNA repair helicase RAD25 [Magnaporthe oryzae Y34]
gi|440478289|gb|ELQ59131.1| DNA repair helicase RAD25 [Magnaporthe oryzae P131]
Length = 835
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 54/62 (87%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT+++ +VLC
Sbjct: 336 LDIDLRPNTQVRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKRGVIVLC 395
Query: 61 NS 62
S
Sbjct: 396 TS 397
>gi|358371648|dbj|GAA88255.1| TFIIH complex helicase Ssl2 [Aspergillus kawachii IFO 4308]
Length = 814
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 315 LDIDLKPAARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAGCTIKKGTIVLC 374
Query: 61 NSGV 64
S +
Sbjct: 375 TSSM 378
>gi|350640166|gb|EHA28519.1| TFIIH basal transcription factor complex, subunit SSL2/RAD25
[Aspergillus niger ATCC 1015]
Length = 825
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 326 LDIDLKPAARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAGCTIKKGTIVLC 385
Query: 61 NSGV 64
S +
Sbjct: 386 TSSM 389
>gi|145242602|ref|XP_001393874.1| DNA repair helicase ercc3 [Aspergillus niger CBS 513.88]
gi|134078426|emb|CAL00841.1| unnamed protein product [Aspergillus niger]
Length = 818
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 319 LDIDLKPAARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAGCTIKKGTIVLC 378
Query: 61 NSGV 64
S +
Sbjct: 379 TSSM 382
>gi|400602650|gb|EJP70252.1| DNA repair helicase rad25 [Beauveria bassiana ARSEF 2860]
Length = 816
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 320 LDIDLRPGTQIRPYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGIIVLC 379
Query: 61 NSGV 64
S +
Sbjct: 380 TSSM 383
>gi|169776451|ref|XP_001822692.1| DNA repair helicase ercc3 [Aspergillus oryzae RIB40]
gi|83771427|dbj|BAE61559.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 824
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 322 LDIDLKPQARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 381
Query: 61 NSGV 64
S +
Sbjct: 382 TSSM 385
>gi|238503147|ref|XP_002382807.1| TFIIH complex helicase Ssl2, putative [Aspergillus flavus NRRL3357]
gi|220691617|gb|EED47965.1| TFIIH complex helicase Ssl2, putative [Aspergillus flavus NRRL3357]
gi|391870679|gb|EIT79856.1| RNA polymerase II transcription initiation [Aspergillus oryzae
3.042]
Length = 824
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 322 LDIDLKPQARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIILC 381
Query: 61 NSGV 64
S +
Sbjct: 382 TSSM 385
>gi|326468955|gb|EGD92964.1| hypothetical protein TESG_00524 [Trichophyton tonsurans CBS 112818]
gi|326480066|gb|EGE04076.1| DEAD/DEAH box helicase [Trichophyton equinum CBS 127.97]
Length = 809
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 312 LDIDLKPIAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 371
Query: 61 NSGV 64
S +
Sbjct: 372 TSSM 375
>gi|327301565|ref|XP_003235475.1| TFIIH complex helicase Ssl2 [Trichophyton rubrum CBS 118892]
gi|326462827|gb|EGD88280.1| TFIIH complex helicase Ssl2 [Trichophyton rubrum CBS 118892]
Length = 819
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 322 LDIDLKPIAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 381
Query: 61 NSGV 64
S +
Sbjct: 382 TSSM 385
>gi|315049307|ref|XP_003174028.1| DNA repair helicase RAD25 [Arthroderma gypseum CBS 118893]
gi|311341995|gb|EFR01198.1| DNA repair helicase RAD25 [Arthroderma gypseum CBS 118893]
Length = 803
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 306 LDIDLKPIAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 365
Query: 61 NSGV 64
S +
Sbjct: 366 TSSM 369
>gi|302656492|ref|XP_003019999.1| hypothetical protein TRV_05968 [Trichophyton verrucosum HKI 0517]
gi|291183777|gb|EFE39375.1| hypothetical protein TRV_05968 [Trichophyton verrucosum HKI 0517]
Length = 819
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 322 LDIDLKPIAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 381
Query: 61 NSGV 64
S +
Sbjct: 382 TSSM 385
>gi|302506306|ref|XP_003015110.1| hypothetical protein ARB_06870 [Arthroderma benhamiae CBS 112371]
gi|291178681|gb|EFE34470.1| hypothetical protein ARB_06870 [Arthroderma benhamiae CBS 112371]
Length = 830
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 333 LDIDLKPIAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 392
Query: 61 NSGV 64
S +
Sbjct: 393 TSSM 396
>gi|296817193|ref|XP_002848933.1| DNA repair helicase RAD25 [Arthroderma otae CBS 113480]
gi|238839386|gb|EEQ29048.1| DNA repair helicase RAD25 [Arthroderma otae CBS 113480]
Length = 813
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 316 LDIDLKPIAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGTIVLC 375
Query: 61 NSGV 64
S +
Sbjct: 376 TSSM 379
>gi|452981911|gb|EME81670.1| hypothetical protein MYCFIDRAFT_154357 [Pseudocercospora fijiensis
CIRAD86]
Length = 807
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +R YQE +L KMFGNGRARSG+IVLPCGAGK+LVG+TA CTV+K A+VLC
Sbjct: 304 LDIDLKPNVQIRYYQEHALSKMFGNGRARSGIIVLPCGAGKTLVGITAACTVKKSAIVLC 363
Query: 61 NSGV 64
S +
Sbjct: 364 TSAM 367
>gi|167523483|ref|XP_001746078.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775349|gb|EDQ88973.1| predicted protein [Monosiga brevicollis MX1]
Length = 835
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFG-NGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+ IDLKP+ +LRPYQEKSL KMFG G+ARSG+IVLPCGAGK+L GVTA T++KRA+VL
Sbjct: 346 LKIDLKPTCILRPYQEKSLSKMFGRTGQARSGIIVLPCGAGKTLTGVTAVSTIKKRAIVL 405
Query: 60 CNSGV 64
C S V
Sbjct: 406 CTSTV 410
>gi|453083736|gb|EMF11781.1| TFIIH basal transcription factor complex helicase XPB subunit
[Mycosphaerella populorum SO2202]
Length = 847
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +R YQE +L KMFGNGRARSG+IVLPCGAGK+LVG+TA CTV+K A+VLC
Sbjct: 339 LDIDLRPNVQIRYYQEHALSKMFGNGRARSGIIVLPCGAGKTLVGITAACTVKKSAIVLC 398
Query: 61 NSGV 64
S +
Sbjct: 399 TSAM 402
>gi|398393830|ref|XP_003850374.1| hypothetical protein MYCGRDRAFT_110466 [Zymoseptoria tritici
IPO323]
gi|339470252|gb|EGP85350.1| hypothetical protein MYCGRDRAFT_110466 [Zymoseptoria tritici
IPO323]
Length = 853
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +R YQE +L KMFGNGRARSG+IVLPCGAGK+LVG+TA CTV+K A+VLC
Sbjct: 351 LDIDLRPNVQIRYYQEHALSKMFGNGRARSGIIVLPCGAGKTLVGITAACTVKKSAIVLC 410
Query: 61 NSGV 64
S +
Sbjct: 411 TSAM 414
>gi|345568577|gb|EGX51470.1| hypothetical protein AOL_s00054g169 [Arthrobotrys oligospora ATCC
24927]
Length = 838
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DL+P A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 338 LDMDLRPQAQIRHYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKSVVVLC 397
Query: 61 NSGV 64
S +
Sbjct: 398 TSSM 401
>gi|302773734|ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Selaginella moellendorffii]
gi|300161800|gb|EFJ28414.1| hypothetical protein SELMODRAFT_147068 [Selaginella moellendorffii]
Length = 713
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++I+LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C +RK L L
Sbjct: 220 LSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLA 279
Query: 61 NSGV 64
+ V
Sbjct: 280 TNAV 283
>gi|302793364|ref|XP_002978447.1| hypothetical protein SELMODRAFT_109026 [Selaginella moellendorffii]
gi|300153796|gb|EFJ20433.1| hypothetical protein SELMODRAFT_109026 [Selaginella moellendorffii]
Length = 733
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++I+LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C +RK L L
Sbjct: 240 LSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLA 299
Query: 61 NSGV 64
+ V
Sbjct: 300 TNAV 303
>gi|452823742|gb|EME30750.1| DNA excision repair protein ERCC-3 [Galdieria sulphuraria]
Length = 807
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLK + +RPYQEKSL KMFGNG ARSGVIVLPCGAGK+LVGV A CT++K LVLC
Sbjct: 309 IEMDLKATTQVRPYQEKSLSKMFGNGLARSGVIVLPCGAGKTLVGVVAACTIKKPTLVLC 368
Query: 61 NSGV 64
S V
Sbjct: 369 TSAV 372
>gi|299115227|emb|CBN74062.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 884
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLK + +R YQEKSL KMFGNGRARSG+IVLPCGAGK+L GVTA T++K LVLC
Sbjct: 399 LKIDLKANTRIRAYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLVLC 458
Query: 61 NSGV 64
SGV
Sbjct: 459 TSGV 462
>gi|402086817|gb|EJT81715.1| DNA repair helicase RAD25 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 818
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P+ +RPYQEKSL KMFGNGRA+SG+IVLPCGAGK+LVGVTA CT++K ++L
Sbjct: 315 LDIDLRPNTQIRPYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGVTAACTIKKGVVILA 374
Query: 61 NS 62
S
Sbjct: 375 TS 376
>gi|290983477|ref|XP_002674455.1| predicted protein [Naegleria gruberi]
gi|284088045|gb|EFC41711.1| predicted protein [Naegleria gruberi]
Length = 818
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +R YQEKSL KMF NGRARSG+IVLPCGAGK+LVGVTA T++K LVLC
Sbjct: 338 LVIDLKPTTTIRSYQEKSLNKMFSNGRARSGIIVLPCGAGKTLVGVTAASTIKKHTLVLC 397
Query: 61 -NSGVVF 66
N+ VF
Sbjct: 398 INTVSVF 404
>gi|302765739|ref|XP_002966290.1| hypothetical protein SELMODRAFT_230853 [Selaginella moellendorffii]
gi|300165710|gb|EFJ32317.1| hypothetical protein SELMODRAFT_230853 [Selaginella moellendorffii]
Length = 711
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++I+LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C +R+ L L
Sbjct: 225 LSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRRSCLCLA 284
Query: 61 NSGV 64
+ V
Sbjct: 285 TNAV 288
>gi|302793029|ref|XP_002978280.1| hypothetical protein SELMODRAFT_418040 [Selaginella moellendorffii]
gi|300154301|gb|EFJ20937.1| hypothetical protein SELMODRAFT_418040 [Selaginella moellendorffii]
Length = 747
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++I+LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C +R+ L L
Sbjct: 253 LSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRRSCLCLA 312
Query: 61 NSGV 64
+ V
Sbjct: 313 TNAV 316
>gi|406861685|gb|EKD14738.1| DNA repair helicase rad25 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 839
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K ++LC
Sbjct: 337 LDIDLRPIAQIRHYQEKSLSKMFGNGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIILC 396
Query: 61 NSGV 64
S +
Sbjct: 397 TSSM 400
>gi|148905942|gb|ABR16132.1| unknown [Picea sitchensis]
Length = 772
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C +RK L L
Sbjct: 274 LNVELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLA 333
Query: 61 NSGV 64
+ V
Sbjct: 334 TNAV 337
>gi|429962851|gb|ELA42395.1| DNA repair helicase rad25 [Vittaforma corneae ATCC 50505]
Length = 659
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP++ +R YQE L KMFGNGRARSG+IVLPCGAGK+LVG+TA T++K ALVLC
Sbjct: 197 LDIDLKPTSHIRSYQEICLNKMFGNGRARSGIIVLPCGAGKTLVGITAISTIKKSALVLC 256
Query: 61 NSGV 64
S V
Sbjct: 257 TSAV 260
>gi|425772494|gb|EKV10895.1| hypothetical protein PDIG_53830 [Penicillium digitatum PHI26]
gi|425774926|gb|EKV13217.1| hypothetical protein PDIP_49050 [Penicillium digitatum Pd1]
Length = 822
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA T++K +VLC
Sbjct: 321 LDMDLKPAARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAAATIKKGTIVLC 380
Query: 61 NSGV 64
S +
Sbjct: 381 TSSM 384
>gi|255955729|ref|XP_002568617.1| Pc21g16090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590328|emb|CAP96506.1| Pc21g16090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 822
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 54/64 (84%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP+A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA T++K +VLC
Sbjct: 321 LDMDLKPAARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAAATIKKGTIVLC 380
Query: 61 NSGV 64
S +
Sbjct: 381 TSSM 384
>gi|296413360|ref|XP_002836382.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630199|emb|CAZ80573.1| unnamed protein product [Tuber melanosporum]
Length = 826
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 53/64 (82%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP A +R YQEKSL KMFGNGRA+SG+IVLPCGAGK+LVG+TA CT++K +VL
Sbjct: 325 LDMDLKPQAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKSVVVLA 384
Query: 61 NSGV 64
S +
Sbjct: 385 TSSM 388
>gi|297742218|emb|CBI34367.3| unnamed protein product [Vitis vinifera]
Length = 850
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C +RK L L
Sbjct: 352 LDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLA 411
Query: 61 NSGV 64
+ V
Sbjct: 412 TNAV 415
>gi|225426192|ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
Length = 771
Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C +RK L L
Sbjct: 273 LDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLA 332
Query: 61 NSGV 64
+ V
Sbjct: 333 TNAV 336
>gi|348671252|gb|EGZ11073.1| hypothetical protein PHYSODRAFT_563851 [Phytophthora sojae]
Length = 818
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP+ +R YQEKSL KMFGNGRARSG+IVLPCGAGK+L GVTA T++K L LC
Sbjct: 334 LEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLC 393
Query: 61 NSGV 64
S V
Sbjct: 394 TSAV 397
>gi|301094774|ref|XP_002896491.1| TFIIH basal transcription factor complex helicase XPB subunit
[Phytophthora infestans T30-4]
gi|262109466|gb|EEY67518.1| TFIIH basal transcription factor complex helicase XPB subunit
[Phytophthora infestans T30-4]
Length = 820
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP+ +R YQEKSL KMFGNGRARSG+IVLPCGAGK+L GVTA T++K L LC
Sbjct: 336 LEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLC 395
Query: 61 NSGV 64
S V
Sbjct: 396 TSAV 399
>gi|308802017|ref|XP_003078322.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
gi|116056774|emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
Length = 812
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+LKP +RPYQEKSL KMFGNGRARSG+IVLPCGAGKSL G+ A +RK L LC
Sbjct: 299 LNIELKPMTRIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLTGIAAAARIRKSCLCLC 358
Query: 61 NSGV 64
S V
Sbjct: 359 TSSV 362
>gi|325189553|emb|CCA24040.1| unknown putative [Albugo laibachii Nc14]
Length = 788
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP+ +R YQEKSL KMFGNGRARSG+IVLPCGAGK+L GVTA T++K L LC
Sbjct: 324 IEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLC 383
Query: 61 NSGV 64
S V
Sbjct: 384 TSAV 387
>gi|325189336|emb|CCA23856.1| DNA excision repair crosscomplementing protein similar to human
Xeroderma pigmentosum group B DNA repair protein
putative [Albugo laibachii Nc14]
Length = 811
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DLKP+ +R YQEKSL KMFGNGRARSG+IVLPCGAGK+L GVTA T++K L LC
Sbjct: 324 IEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLC 383
Query: 61 NSGV 64
S V
Sbjct: 384 TSAV 387
>gi|387596504|gb|EIJ94125.1| DNA repair helicase rad25, partial [Nematocida parisii ERTm1]
Length = 653
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +R YQE SL KMFGNGRARSG+IVLPCGAGK+LVG+ A CT+++ L+LC
Sbjct: 199 LDIDLKPTTSIRTYQEFSLNKMFGNGRARSGIIVLPCGAGKTLVGIVALCTMKRSCLILC 258
Query: 61 NSGV 64
+ V
Sbjct: 259 TTSV 262
>gi|387594649|gb|EIJ89673.1| DNA repair helicase rad25 [Nematocida parisii ERTm3]
Length = 653
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ +R YQE SL KMFGNGRARSG+IVLPCGAGK+LVG+ A CT+++ L+LC
Sbjct: 199 LDIDLKPTTSIRTYQEFSLNKMFGNGRARSGIIVLPCGAGKTLVGIVALCTMKRSCLILC 258
Query: 61 NSGV 64
+ V
Sbjct: 259 TTSV 262
>gi|378728720|gb|EHY55179.1| DNA excision repair protein ERCC-3 [Exophiala dermatitidis
NIH/UT8656]
Length = 852
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P +RPYQEK+L KMFGNGR +SG+IVLPCGAGK+LVG+TA C ++K +VLC
Sbjct: 331 LPIDLRPQTQIRPYQEKALSKMFGNGRGKSGIIVLPCGAGKTLVGITAGCHIKKSIVVLC 390
Query: 61 NSGV 64
S +
Sbjct: 391 TSAM 394
>gi|449329742|gb|AGE96011.1| DNA repair helicase rad25 [Encephalitozoon cuniculi]
Length = 696
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++R YQE L KMFGNGRARSG+IVLPCG+GK++VG+TA T++K LVLC
Sbjct: 223 LQIDLKPTTIIRSYQEICLNKMFGNGRARSGIIVLPCGSGKTIVGITAISTIKKNCLVLC 282
Query: 61 NSGV 64
S V
Sbjct: 283 TSAV 286
>gi|85691085|ref|XP_965942.1| DNA repair helicase [Encephalitozoon cuniculi GB-M1]
gi|74697619|sp|Q8SSK1.1|RAD25_ENCCU RecName: Full=Probable DNA repair helicase RAD25 homolog; AltName:
Full=General transcription and DNA repair factor IIH
subunit RAD25; Short=TFIIH subunit RAD25
Length = 696
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++R YQE L KMFGNGRARSG+IVLPCG+GK++VG+TA T++K LVLC
Sbjct: 223 LQIDLKPTTIIRSYQEICLNKMFGNGRARSGIIVLPCGSGKTIVGITAISTIKKNCLVLC 282
Query: 61 NSGV 64
S V
Sbjct: 283 TSAV 286
>gi|392513052|emb|CAD24977.2| DNA REPAIR HELICASE RAD25 [Encephalitozoon cuniculi GB-M1]
Length = 672
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++R YQE L KMFGNGRARSG+IVLPCG+GK++VG+TA T++K LVLC
Sbjct: 199 LQIDLKPTTIIRSYQEICLNKMFGNGRARSGIIVLPCGSGKTIVGITAISTIKKNCLVLC 258
Query: 61 NSGV 64
S V
Sbjct: 259 TSAV 262
>gi|401825205|ref|XP_003886698.1| Rad25-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
gi|337263116|gb|AEI69269.1| DNA repair helicase Rad25 [Encephalitozoon hellem]
gi|395459843|gb|AFM97717.1| Rad25-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
Length = 672
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++R YQE L KMFGNGRARSG+IVLPCG+GK++VG+TA T++K LVLC
Sbjct: 199 LKIDLKPTTIIRSYQEICLNKMFGNGRARSGIIVLPCGSGKTIVGITAISTIKKSCLVLC 258
Query: 61 NSGV 64
S V
Sbjct: 259 TSAV 262
>gi|337263086|gb|AEI69254.1| DNA repair helicase [Encephalitozoon romaleae]
gi|396080809|gb|AFN82430.1| DNA repair helicase Rad25 [Encephalitozoon romaleae SJ-2008]
Length = 672
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++R YQE L KMFGNGRARSG+IVLPCG+GK++VG+TA T++K LVLC
Sbjct: 199 LKIDLKPTTIIRSYQEICLNKMFGNGRARSGIIVLPCGSGKTIVGITAISTIKKSCLVLC 258
Query: 61 NSGV 64
S V
Sbjct: 259 TSAV 262
>gi|303388169|ref|XP_003072319.1| DNA repair helicase Rad25 [Encephalitozoon intestinalis ATCC 50506]
gi|303301458|gb|ADM10959.1| DNA repair helicase Rad25 [Encephalitozoon intestinalis ATCC 50506]
Length = 672
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP+ ++R YQE L KMFGNGRARSG+IVLPCG+GK++VG+TA T++K LVLC
Sbjct: 199 LQIDLKPTTIIRSYQEICLNKMFGNGRARSGIIVLPCGSGKTIVGITAISTIKKSCLVLC 258
Query: 61 NSGV 64
S V
Sbjct: 259 TSAV 262
>gi|145344427|ref|XP_001416734.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576960|gb|ABO95027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 781
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+LKP +RPYQEKSL KMFGNGRARSG+IVLPCGAGKSL G+ A +RK L LC
Sbjct: 265 LGIELKPMTRIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLTGIAAAARIRKSCLCLC 324
Query: 61 NSGV 64
S V
Sbjct: 325 TSSV 328
>gi|302836588|ref|XP_002949854.1| hypothetical protein VOLCADRAFT_90307 [Volvox carteri f.
nagariensis]
gi|300264763|gb|EFJ48957.1| hypothetical protein VOLCADRAFT_90307 [Volvox carteri f.
nagariensis]
Length = 1119
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +LKP LRPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV A V+K L LC
Sbjct: 642 LPFELKPHVKLRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVAAASRVKKSCLCLC 701
Query: 61 NSGV 64
S V
Sbjct: 702 TSSV 705
>gi|449298112|gb|EMC94129.1| hypothetical protein BAUCODRAFT_221487 [Baudoinia compniacensis
UAMH 10762]
Length = 852
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/63 (66%), Positives = 50/63 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP +R YQE +L KMFGNGRARSG+IVLPCGAGK+LVG+TA CT +K +VLC
Sbjct: 346 LDIDLKPQTQIRYYQEHALSKMFGNGRARSGIIVLPCGAGKTLVGITAACTEKKSVIVLC 405
Query: 61 NSG 63
S
Sbjct: 406 TSA 408
>gi|224058459|ref|XP_002299520.1| predicted protein [Populus trichocarpa]
gi|222846778|gb|EEE84325.1| predicted protein [Populus trichocarpa]
Length = 803
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 287 LNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 346
Query: 61 NSGV 64
+ V
Sbjct: 347 TNAV 350
>gi|356528573|ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max]
Length = 768
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 270 LDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 329
Query: 61 NSGV 64
+ V
Sbjct: 330 TNAV 333
>gi|356513365|ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max]
Length = 768
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 270 LDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 329
Query: 61 NSGV 64
+ V
Sbjct: 330 TNAV 333
>gi|242054073|ref|XP_002456182.1| hypothetical protein SORBIDRAFT_03g031750 [Sorghum bicolor]
gi|241928157|gb|EES01302.1| hypothetical protein SORBIDRAFT_03g031750 [Sorghum bicolor]
Length = 767
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 274 LEMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 333
Query: 61 NSGV 64
+ V
Sbjct: 334 TNAV 337
>gi|222619087|gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japonica Group]
Length = 766
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 272 LEMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 331
Query: 61 NSGV 64
+ V
Sbjct: 332 TNAV 335
>gi|218188886|gb|EEC71313.1| hypothetical protein OsI_03346 [Oryza sativa Indica Group]
Length = 766
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 272 LEMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 331
Query: 61 NSGV 64
+ V
Sbjct: 332 TNAV 335
>gi|115439313|ref|NP_001043936.1| Os01g0691600 [Oryza sativa Japonica Group]
gi|113533467|dbj|BAF05850.1| Os01g0691600 [Oryza sativa Japonica Group]
Length = 580
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 272 LEMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 331
Query: 61 NSGV 64
+ V
Sbjct: 332 TNAV 335
>gi|414880902|tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
Length = 767
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 274 LDMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 333
Query: 61 NSGV 64
+ V
Sbjct: 334 TNAV 337
>gi|414880901|tpg|DAA58032.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
Length = 702
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 274 LDMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 333
Query: 61 NSGV 64
+ V
Sbjct: 334 TNAV 337
>gi|357136004|ref|XP_003569596.1| PREDICTED: DNA repair helicase XPB2-like [Brachypodium distachyon]
Length = 766
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 274 LDMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 333
Query: 61 NSGV 64
+ V
Sbjct: 334 TNAV 337
>gi|326521180|dbj|BAJ96793.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 762
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 273 LDMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 332
Query: 61 NSGV 64
+ V
Sbjct: 333 TNAV 336
>gi|255537537|ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
Length = 768
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C ++K L L
Sbjct: 270 LDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 329
Query: 61 NSGV 64
+ V
Sbjct: 330 TNAV 333
>gi|169806188|ref|XP_001827839.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|263505381|sp|A9CRJ7.1|RAD25_ENTBH RecName: Full=Probable DNA repair helicase RAD25 homolog; AltName:
Full=General transcription and DNA repair factor IIH
subunit RAD25; Short=TFIIH subunit RAD25
gi|161779287|gb|EDQ31310.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 609
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKPS +R YQE SL KM GNGRARSG+IVLPCG+GK+LVG+TA T++K A++LC
Sbjct: 179 LHIDLKPSCHIRSYQEISLNKMLGNGRARSGIIVLPCGSGKTLVGITAISTIKKSAIILC 238
Query: 61 NSGV 64
S V
Sbjct: 239 TSAV 242
>gi|451853872|gb|EMD67165.1| hypothetical protein COCSADRAFT_285430 [Cochliobolus sativus
ND90Pr]
gi|451999787|gb|EMD92249.1| hypothetical protein COCHEDRAFT_1224108 [Cochliobolus
heterostrophus C5]
Length = 804
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEK+L KMF N RARSG+IVLPCGAGK+LVG+TA C V+K +VLC
Sbjct: 308 LEIDLKPHAQIRYYQEKALSKMFSNSRARSGIIVLPCGAGKTLVGITAACGVKKSVIVLC 367
Query: 61 NSGV 64
S +
Sbjct: 368 TSAM 371
>gi|169616097|ref|XP_001801464.1| hypothetical protein SNOG_11221 [Phaeosphaeria nodorum SN15]
gi|111060600|gb|EAT81720.1| hypothetical protein SNOG_11221 [Phaeosphaeria nodorum SN15]
Length = 804
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEK+L KMF N RARSG+IVLPCGAGK+LVG+TA C V+K +VLC
Sbjct: 307 LEIDLKPHAQIRYYQEKALSKMFSNSRARSGIIVLPCGAGKTLVGITAACGVKKSVIVLC 366
Query: 61 NSGV 64
S +
Sbjct: 367 TSAM 370
>gi|303271055|ref|XP_003054889.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462863|gb|EEH60141.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 803
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 48/64 (75%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP +RPYQEKSL KMFGNGRARSG+IVLPCGAGKSL G+ A VRK L LC
Sbjct: 319 LDIALKPMTRIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLTGIAAASRVRKSCLCLC 378
Query: 61 NSGV 64
S V
Sbjct: 379 TSSV 382
>gi|168044023|ref|XP_001774482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674194|gb|EDQ60706.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 734
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A C + K L L
Sbjct: 239 LDIKLKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRISKSVLCLA 298
Query: 61 NSGV 64
+ V
Sbjct: 299 TNAV 302
>gi|393228723|gb|EJD36361.1| TFIIH basal transcription factor complex helicase XPB subunit
[Auricularia delicata TFB-10046 SS5]
Length = 684
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I L S +RPYQE SLRKMFGNGRARSG+IVLPCGAGK+LVGV A T+ K LVLC
Sbjct: 252 LNIRLTTSGFVRPYQETSLRKMFGNGRARSGIIVLPCGAGKTLVGVMAAGTINKSCLVLC 311
Query: 61 NSGV 64
S V
Sbjct: 312 TSAV 315
>gi|396492464|ref|XP_003843805.1| similar to TFIIH basal transcription factor complex helicase XPB
subunit [Leptosphaeria maculans JN3]
gi|312220385|emb|CBY00326.1| similar to TFIIH basal transcription factor complex helicase XPB
subunit [Leptosphaeria maculans JN3]
Length = 806
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEK+L KMF N RARSG+IVLPCGAGK+LVG+TA C V+K +VLC
Sbjct: 312 LDIDLKPHAQIRYYQEKALSKMFSNSRARSGIIVLPCGAGKTLVGITAACGVKKSVIVLC 371
Query: 61 NSGV 64
S +
Sbjct: 372 TSAM 375
>gi|189210050|ref|XP_001941357.1| TFIIH basal transcription factor complex helicase XPB subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977450|gb|EDU44076.1| TFIIH basal transcription factor complex helicase XPB subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 803
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLKP A +R YQEK+L KMF N RARSG+IVLPCGAGK+LVG+TA C V+K +VLC
Sbjct: 307 LEIDLKPHAQIRYYQEKALGKMFSNSRARSGIIVLPCGAGKTLVGITAACGVKKSVMVLC 366
Query: 61 NSGV 64
S +
Sbjct: 367 TSAM 370
>gi|300707502|ref|XP_002995956.1| hypothetical protein NCER_101030 [Nosema ceranae BRL01]
gi|263505385|sp|C4V922.1|RAD25_NOSCE RecName: Full=Probable DNA repair helicase RAD25 homolog; AltName:
Full=General transcription and DNA repair factor IIH
subunit RAD25; Short=TFIIH subunit RAD25
gi|239605203|gb|EEQ82285.1| hypothetical protein NCER_101030 [Nosema ceranae BRL01]
Length = 659
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
IDLKPS ++R YQE L KMF NGRARSG+IVLPCG+GK+LVG+TA T++K L+LC S
Sbjct: 196 IDLKPSTMIRSYQETCLNKMFCNGRARSGIIVLPCGSGKTLVGITALTTIKKSCLILCTS 255
Query: 63 GV 64
V
Sbjct: 256 AV 257
>gi|328773269|gb|EGF83306.1| hypothetical protein BATDEDRAFT_34108 [Batrachochytrium
dendrobatidis JAM81]
Length = 823
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ + LKP A LRPYQ L K+FGNGR RSGV+VLPCG+GK+LVGV A CTV+K LVLC
Sbjct: 336 LEMTLKPFAKLRPYQANGLSKVFGNGRVRSGVVVLPCGSGKTLVGVAAACTVKKNCLVLC 395
Query: 61 NSGV 64
S V
Sbjct: 396 TSSV 399
>gi|328767381|gb|EGF77431.1| hypothetical protein BATDEDRAFT_20761 [Batrachochytrium
dendrobatidis JAM81]
Length = 777
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ + LKP A LRPYQ L K+FGNGR RSGV+VLPCG+GK+LVGV A CTV+K LVLC
Sbjct: 290 LEMTLKPFAKLRPYQANGLSKVFGNGRVRSGVVVLPCGSGKTLVGVAAACTVKKNCLVLC 349
Query: 61 NSGV 64
S V
Sbjct: 350 TSSV 353
>gi|330948023|ref|XP_003307038.1| hypothetical protein PTT_20359 [Pyrenophora teres f. teres 0-1]
gi|311315156|gb|EFQ84865.1| hypothetical protein PTT_20359 [Pyrenophora teres f. teres 0-1]
Length = 803
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P A +R YQEK+L KMF N RARSG+IVLPCGAGK+LVG+TA C V+K +VLC
Sbjct: 307 LDIDLRPHAQIRYYQEKALGKMFSNSRARSGIIVLPCGAGKTLVGITAACGVKKSVMVLC 366
Query: 61 NSGV 64
S +
Sbjct: 367 TSAM 370
>gi|429964053|gb|ELA46051.1| DNA repair helicase rad25 [Vavraia culicis 'floridensis']
Length = 667
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LK + V+R YQE SL KMFGNGR RSG+IVLPCG+GK+LVG+TA CT++K LVLC
Sbjct: 209 IDMELKNNIVIRTYQEISLNKMFGNGRGRSGIIVLPCGSGKTLVGITAICTIKKPTLVLC 268
Query: 61 NSGV 64
S V
Sbjct: 269 TSAV 272
>gi|449530460|ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
Length = 725
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A +RK L L
Sbjct: 228 LDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLA 287
Query: 61 NSGV 64
+ V
Sbjct: 288 TNAV 291
>gi|449452290|ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
Length = 768
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A +RK L L
Sbjct: 271 LDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLA 330
Query: 61 NSGV 64
+ V
Sbjct: 331 TNAV 334
>gi|452841426|gb|EME43363.1| hypothetical protein DOTSEDRAFT_72690 [Dothistroma septosporum
NZE10]
Length = 847
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I L+P +R YQE++L KMFGNGRARSG+IVLPCGAGK+LVG+TA CT+ K +VLC
Sbjct: 345 LDIKLRPVVQIRYYQEQALAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIAKSTIVLC 404
Query: 61 NSGV 64
S +
Sbjct: 405 TSAM 408
>gi|74690569|sp|Q6E6J3.1|RAD25_ANTLO RecName: Full=Probable DNA repair helicase RAD25 homolog; AltName:
Full=General transcription and DNA repair factor IIH
subunit RAD25; Short=TFIIH subunit RAD25
gi|47156900|gb|AAT12293.1| DNA repair helicase RAD25 [Antonospora locustae]
Length = 687
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DL+ + +R YQE SL KMFGN RARSGVIVLPCGAGK+LVG+TA CT++K +VLC
Sbjct: 218 LDMDLRDTVSIRTYQEVSLNKMFGNRRARSGVIVLPCGAGKTLVGITAMCTIKKPCIVLC 277
Query: 61 NSGV 64
SGV
Sbjct: 278 TSGV 281
>gi|440492855|gb|ELQ75388.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH [Trachipleistophora hominis]
Length = 666
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 52/64 (81%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LK + V+R YQE SL KMFGNGR RSG+IVLPCG+GK+LVG+TA CT+++ LVLC
Sbjct: 208 INMELKNNIVIRTYQEISLNKMFGNGRGRSGIIVLPCGSGKTLVGITAICTIKRPTLVLC 267
Query: 61 NSGV 64
S V
Sbjct: 268 TSAV 271
>gi|378756456|gb|EHY66480.1| DNA repair helicase rad25 [Nematocida sp. 1 ERTm2]
Length = 347
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDLK + +R YQE SL KMFGNGRARSG+IVLPCGAGK+LVG+ A CT+++ L+LC
Sbjct: 199 LDIDLKSTTSIRTYQEFSLNKMFGNGRARSGIIVLPCGAGKTLVGIVALCTMKRSCLILC 258
Query: 61 NSGV 64
+ V
Sbjct: 259 TTSV 262
>gi|424513709|emb|CCO66331.1| predicted protein [Bathycoccus prasinos]
Length = 962
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 47/64 (73%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ + LKP +RPYQEKSL KMFGNGRARSG+IVLPCGAGKSL G+ A V K L LC
Sbjct: 429 LNVRLKPMTKIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLTGIAAAVRVGKSCLCLC 488
Query: 61 NSGV 64
S V
Sbjct: 489 TSSV 492
>gi|403365939|gb|EJY82760.1| hypothetical protein OXYTRI_19624 [Oxytricha trifallax]
Length = 808
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+LK + +R YQE+SL KMF NGRARSGVIVLPCGAGK+L G+ A CTV+K ++LC
Sbjct: 336 LKIELKSTTQIRSYQEQSLSKMFSNGRARSGVIVLPCGAGKTLAGIIAACTVKKSTMILC 395
Query: 61 NSGV 64
S V
Sbjct: 396 TSDV 399
>gi|402466417|gb|EJW01911.1| DNA repair helicase rad25, partial [Edhazardia aedis USNM 41457]
Length = 670
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
IDLKP+ +R YQE L KMF NGRARSG+IVLPCG+GK+LVG+TA CT++ L+LC S
Sbjct: 279 IDLKPNTQIRSYQEICLNKMFSNGRARSGIIVLPCGSGKTLVGITAVCTMKHPTLILCTS 338
Query: 63 GV 64
V
Sbjct: 339 SV 340
>gi|323452822|gb|EGB08695.1| hypothetical protein AURANDRAFT_521, partial [Aureococcus
anophagefferens]
Length = 634
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/63 (61%), Positives = 49/63 (77%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DL+PS +R YQEKSL KMFGNGRARSG+IVLPCGAGK+L + A TV++ LVLC
Sbjct: 233 LPVDLRPSTKIRSYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTAIVAAATVKRSTLVLC 292
Query: 61 NSG 63
+
Sbjct: 293 TNA 295
>gi|47606403|gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
Length = 767
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A ++K L L
Sbjct: 272 LDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLA 331
Query: 61 NSGV 64
+ V
Sbjct: 332 TNAV 335
>gi|9758046|dbj|BAB08509.1| DNA excision repair cross-complementing protein; similar to human
Xeroderma pigmentosum group B DNA repair protein
[Arabidopsis thaliana]
Length = 755
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A ++K L L
Sbjct: 260 LDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLA 319
Query: 61 NSGV 64
+ V
Sbjct: 320 TNAV 323
>gi|297805512|ref|XP_002870640.1| DNA repair and transcription factor XPB1 [Arabidopsis lyrata subsp.
lyrata]
gi|297316476|gb|EFH46899.1| DNA repair and transcription factor XPB1 [Arabidopsis lyrata subsp.
lyrata]
Length = 767
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A ++K L L
Sbjct: 272 LDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLA 331
Query: 61 NSGV 64
+ V
Sbjct: 332 TNAV 335
>gi|297805510|ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316475|gb|EFH46898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 779
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A ++K L L
Sbjct: 284 LDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLA 343
Query: 61 NSGV 64
+ V
Sbjct: 344 TNAV 347
>gi|9758045|dbj|BAB08508.1| DNA excision repair cross-complementing protein [Arabidopsis
thaliana]
Length = 754
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A ++K L L
Sbjct: 260 LDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLA 319
Query: 61 NSGV 64
+ V
Sbjct: 320 TNAV 323
>gi|18422089|ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]
gi|57013267|sp|Q9FUG4.1|XPB2_ARATH RecName: Full=DNA repair helicase XPB2; AltName: Full=ERCC3 homolog
2; AltName: Full=RAD25 homolog 2; Short=AtXPB2; AltName:
Full=XPB homolog 2
gi|11037022|gb|AAG27465.1|AF308595_1 putative DNA repair protein and transcription factor [Arabidopsis
thaliana]
gi|47606402|gb|AAT36214.1| putative DNA repair and transcription factor XBP2 [Arabidopsis
thaliana]
gi|332007286|gb|AED94669.1| DNA repair helicase XPB2 [Arabidopsis thaliana]
Length = 766
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A ++K L L
Sbjct: 272 LDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLA 331
Query: 61 NSGV 64
+ V
Sbjct: 332 TNAV 335
>gi|18422091|ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA repair helicase XPB1; AltName: Full=ERCC3 homolog
1; AltName: Full=Protein araXPB; AltName: Full=RAD25
homolog 1; Short=AtXPB1; AltName: Full=XPB homolog 1
gi|11771735|gb|AAC49987.2| putative DNA repair protein and transcription factor [Arabidopsis
thaliana]
gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis thaliana]
gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8 [Arabidopsis thaliana]
gi|332007287|gb|AED94670.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
Length = 767
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ++LKP A RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A ++K L L
Sbjct: 272 LDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLA 331
Query: 61 NSGV 64
+ V
Sbjct: 332 TNAV 335
>gi|384252657|gb|EIE26133.1| DNA repair helicase rad25 [Coccomyxa subellipsoidea C-169]
Length = 815
Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+LKP RPYQEKS+ KMFGNGRARSG+IVLPCGAGKSLVG+TA ++K L L
Sbjct: 319 LNIELKPHVQHRPYQEKSMAKMFGNGRARSGIIVLPCGAGKSLVGITAAARIKKSVLCLV 378
Query: 61 NSGV 64
+ V
Sbjct: 379 TNSV 382
>gi|300123236|emb|CBK24509.2| unnamed protein product [Blastocystis hominis]
Length = 748
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/60 (66%), Positives = 50/60 (83%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
I L PS +RPYQE+ L KMFGNGRARSG+IVLPCGAGK++VG+TA T++K +V+CNS
Sbjct: 272 IRLAPSTHIRPYQERCLNKMFGNGRARSGLIVLPCGAGKTIVGITAAVTIKKSCIVVCNS 331
>gi|223999873|ref|XP_002289609.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974817|gb|EED93146.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 625
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+DLKP +R YQE+SL KMFGNGRARSG+IVLPCGAGK+L GVTA T++K + LC +
Sbjct: 233 MDLKPHTRIRRYQERSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAAQTIKKSVVCLCTN 292
Query: 63 GV 64
V
Sbjct: 293 AV 294
>gi|219119406|ref|XP_002180464.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407937|gb|EEC47872.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 720
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+DLKP +R YQE+SL KMFGNGRARSG+IVLPCGAGK+L GVTA T++K + LC +
Sbjct: 230 MDLKPHTRIRRYQERSLAKMFGNGRARSGIIVLPCGAGKTLTGVTAAQTIKKSVVCLCTN 289
Query: 63 GV 64
V
Sbjct: 290 AV 291
>gi|403352874|gb|EJY75962.1| Transcription factor IIH subunit [Oxytricha trifallax]
gi|403372236|gb|EJY86011.1| Transcription factor IIH subunit [Oxytricha trifallax]
Length = 593
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+LK + +R YQE+SL KMF NGRARSGVIVLPCGAGK+L G+ A CT +K ++LC
Sbjct: 121 LKIELKSTTQIRSYQEQSLSKMFSNGRARSGVIVLPCGAGKTLAGIIAACTAKKSTMILC 180
Query: 61 NSGV 64
S V
Sbjct: 181 TSDV 184
>gi|367055690|ref|XP_003658223.1| hypothetical protein THITE_2156915 [Thielavia terrestris NRRL 8126]
gi|347005489|gb|AEO71887.1| hypothetical protein THITE_2156915 [Thielavia terrestris NRRL 8126]
Length = 828
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL+P +RP+QE+SL KMFGNGRA+SG++VLPCGAGK+LVG+ A CT++K +VL
Sbjct: 312 LDIDLRPGTQIRPHQEQSLNKMFGNGRAKSGIVVLPCGAGKTLVGIAAACTIKKGVVVLA 371
Query: 61 NSGV 64
+
Sbjct: 372 TGSI 375
>gi|160331520|ref|XP_001712467.1| rad25 [Hemiselmis andersenii]
gi|159765915|gb|ABW98142.1| rad25 [Hemiselmis andersenii]
Length = 638
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/64 (59%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ IDL P+ +R YQEK++ KMF GRARSGVIVLPCGAGK++VG+T+ ++K AL++C
Sbjct: 220 IKIDLNPTTTIRRYQEKAISKMFNRGRARSGVIVLPCGAGKTIVGITSVTMIKKTALIVC 279
Query: 61 NSGV 64
NS V
Sbjct: 280 NSTV 283
>gi|307108852|gb|EFN57091.1| hypothetical protein CHLNCDRAFT_57434 [Chlorella variabilis]
Length = 818
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/53 (75%), Positives = 45/53 (84%)
Query: 12 RPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+A ++K L LC +GV
Sbjct: 467 RPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKGCLCLCTNGV 519
>gi|399949903|gb|AFP65559.1| DNA repair helicase [Chroomonas mesostigmatica CCMP1168]
Length = 637
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +DL P + +R YQEK++ KMF GRARSGVIVLPCGAGK++VG+TA V+K AL++C
Sbjct: 215 IKLDLNPISTIRKYQEKAIFKMFNRGRARSGVIVLPCGAGKTIVGITAVTIVKKTALIVC 274
Query: 61 NSGV 64
NS V
Sbjct: 275 NSTV 278
>gi|255071253|ref|XP_002507708.1| predicted protein [Micromonas sp. RCC299]
gi|226522983|gb|ACO68966.1| predicted protein [Micromonas sp. RCC299]
Length = 809
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LKP +R YQEKSL MFGNGRARSG+IVLPCGAGKSL G+ A +RK + LC
Sbjct: 321 LDIALKPMTHIRSYQEKSLSTMFGNGRARSGIIVLPCGAGKSLTGIAAASRIRKSCICLC 380
Query: 61 NSGV 64
S V
Sbjct: 381 TSSV 384
>gi|66359840|ref|XP_627098.1| RAD25, helicase involved in DNA repair [Cryptosporidium parvum Iowa
II]
gi|46228526|gb|EAK89396.1| RAD25, helicase involved in DNA repair [Cryptosporidium parvum Iowa
II]
Length = 835
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LK + +R YQE++LR MF NGRARSG+IVLPCGAGK+L G+TA CT+RK L+L
Sbjct: 304 LDISLKHTTQIRYYQEQALRMMFSNGRARSGIIVLPCGAGKTLTGITAACTMRKSVLILT 363
Query: 61 NSGV 64
S V
Sbjct: 364 TSAV 367
>gi|294955554|ref|XP_002788563.1| DNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239904104|gb|EER20359.1| DNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 804
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ + +P+ ++RPYQE+SL KMF RARSG+IVLPCGAGK+LVG+TA T++KR +VL
Sbjct: 325 INMQFRPTTIVRPYQERSLHKMFSGSRARSGMIVLPCGAGKTLVGITAAATMKKRTMVLT 384
Query: 61 NSGV 64
+ V
Sbjct: 385 TTAV 388
>gi|294940084|ref|XP_002782670.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983]
gi|239894522|gb|EER14465.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983]
Length = 796
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 50/64 (78%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ + +P+ ++RPYQE+SL KMF RARSG+IVLPCGAGK+LVG+TA T++KR +VL
Sbjct: 317 INMQFRPTTIVRPYQERSLHKMFSGSRARSGMIVLPCGAGKTLVGITAAATMKKRTMVLT 376
Query: 61 NSGV 64
+ V
Sbjct: 377 TTAV 380
>gi|154418588|ref|XP_001582312.1| DNA repair helicase rad25 family protein [Trichomonas vaginalis G3]
gi|121916546|gb|EAY21326.1| DNA repair helicase rad25 family protein [Trichomonas vaginalis G3]
Length = 740
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I L+ +RPYQEK+L KMF GRA+SG+IVLPCGAGK+LVG+TA T+ K A+V+C
Sbjct: 287 LNIRLRTETNIRPYQEKALSKMFSGGRAKSGIIVLPCGAGKTLVGITAVATINKPAVVVC 346
Query: 61 NS 62
NS
Sbjct: 347 NS 348
>gi|67588048|ref|XP_665323.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54655954|gb|EAL35093.1| hypothetical protein Chro.80227, partial [Cryptosporidium hominis]
Length = 751
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LK + +R YQE++LR MF NGRARSG+IVLPCGAGK+L G+TA CT+RK L+L
Sbjct: 304 LDISLKHTTQIRYYQEQALRMMFSNGRARSGIIVLPCGAGKTLTGITAACTMRKSILILT 363
Query: 61 NSGV 64
S V
Sbjct: 364 TSAV 367
>gi|211909008|gb|ACJ12794.1| excision repair cross-complementing rodent repair deficiency
complementation group 3 [Sebastiscus marmoratus]
Length = 182
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 44/48 (91%)
Query: 17 KSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
KSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA CTVRKR LVL NS V
Sbjct: 1 KSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSSV 48
>gi|162605680|ref|XP_001713355.1| DNA repair helicase [Guillardia theta]
gi|13794287|gb|AAK39664.1|AF083031_21 DNA repair helicase [Guillardia theta]
Length = 617
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+LK + ++R YQEK+L KMF GRARSGVIVLPCG+GK++VG++A ++K LV+C
Sbjct: 204 IKIELKSNVIVRKYQEKALSKMFNKGRARSGVIVLPCGSGKTIVGISATSIIKKTTLVVC 263
Query: 61 NSGV 64
NS V
Sbjct: 264 NSSV 267
>gi|401408975|ref|XP_003883936.1| hypothetical protein NCLIV_036860 [Neospora caninum Liverpool]
gi|325118353|emb|CBZ53904.1| hypothetical protein NCLIV_036860 [Neospora caninum Liverpool]
Length = 968
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE++LRKMF NGRARSG+IVLPCGAGK+L G+TA CT+RK +VL S V
Sbjct: 456 IRYYQERALRKMFSNGRARSGIIVLPCGAGKTLTGITAACTLRKSVMVLTTSAV 509
>gi|221508622|gb|EEE34191.1| helicase, putative [Toxoplasma gondii VEG]
Length = 997
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE++LRKMF NGRARSG+IVLPCGAGK+L G+TA CT+RK ++L S V
Sbjct: 472 IRYYQERALRKMFSNGRARSGIIVLPCGAGKTLTGITAACTLRKSVMILTTSAV 525
>gi|221488103|gb|EEE26317.1| helicase, putative [Toxoplasma gondii GT1]
Length = 997
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE++LRKMF NGRARSG+IVLPCGAGK+L G+TA CT+RK ++L S V
Sbjct: 472 IRYYQERALRKMFSNGRARSGIIVLPCGAGKTLTGITAACTLRKSVMILTTSAV 525
>gi|209876984|ref|XP_002139934.1| DNA repair helicase rad25 family protein [Cryptosporidium muris
RN66]
gi|209555540|gb|EEA05585.1| DNA repair helicase rad25 family protein [Cryptosporidium muris
RN66]
Length = 815
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 48/64 (75%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LK + +R YQE +LR MF NGRARSG+IVLPCGAGK+L G+TA CT+RK L+L
Sbjct: 279 LDITLKHTTQIRYYQEYALRMMFSNGRARSGIIVLPCGAGKTLTGITAACTMRKSILILT 338
Query: 61 NSGV 64
S V
Sbjct: 339 TSAV 342
>gi|237832699|ref|XP_002365647.1| TFIIH basal transcription factor complex helicase XPB subunit,
putative [Toxoplasma gondii ME49]
gi|211963311|gb|EEA98506.1| TFIIH basal transcription factor complex helicase XPB subunit,
putative [Toxoplasma gondii ME49]
Length = 997
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE++LRKMF NGRARSG+IVLPCGAGK+L G+TA CT+RK ++L S V
Sbjct: 472 IRYYQERALRKMFSNGRARSGIIVLPCGAGKTLTGITAACTLRKSVMILTTSAV 525
>gi|428175063|gb|EKX43955.1| ERCC3/XPB/SSL2/Rad25 nucleotide excision repair [Guillardia theta
CCMP2712]
Length = 694
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 49/64 (76%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+ +P +R YQEKSL KMF +GRARSG IVLPCGAGK+LVG++A ++K A V+C
Sbjct: 202 LKIEARPGTFIRSYQEKSLSKMFSHGRARSGFIVLPCGAGKTLVGISAVANIKKCAAVIC 261
Query: 61 NSGV 64
N+ +
Sbjct: 262 NTSM 265
>gi|429327267|gb|AFZ79027.1| rad25/xp-B DNA repair helicase, putative [Babesia equi]
Length = 779
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE++LR+MF NGRARSG+IVLPCGAGK+L G+ A CTVRK VL S V
Sbjct: 290 IRYYQERALRRMFSNGRARSGIIVLPCGAGKTLTGIVAACTVRKSIFVLTTSAV 343
>gi|403221729|dbj|BAM39861.1| DNA repair helicase [Theileria orientalis strain Shintoku]
Length = 771
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE++LR+MF NGRARSG+IVLPCGAGK+L G+ A CTVRK VL S V
Sbjct: 284 IRYYQERALRRMFSNGRARSGIIVLPCGAGKTLTGIVAACTVRKSIFVLTTSAV 337
>gi|84995690|ref|XP_952567.1| DNA repair helicase [Theileria annulata strain Ankara]
gi|65302728|emb|CAI74835.1| DNA repair helicase, putative [Theileria annulata]
Length = 770
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE++LR+MF NGRARSG+IVLPCGAGK+L G+ A CTVRK VL S V
Sbjct: 284 IRYYQERALRRMFSNGRARSGIIVLPCGAGKTLTGIVAACTVRKSIFVLTTSAV 337
>gi|71030142|ref|XP_764713.1| DNA helicase [Theileria parva strain Muguga]
gi|68351669|gb|EAN32430.1| DNA helicase, putative [Theileria parva]
Length = 770
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE++LR+MF NGRARSG+IVLPCGAGK+L G+ A CTVRK VL S V
Sbjct: 284 IRYYQERALRRMFSNGRARSGIIVLPCGAGKTLTGIVAACTVRKSIFVLTTSAV 337
>gi|156089441|ref|XP_001612127.1| DNA repair helicase rad25 family protein [Babesia bovis]
gi|154799381|gb|EDO08559.1| DNA repair helicase rad25 family protein [Babesia bovis]
Length = 770
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE++LR+MF NGRARSG+IVLPCGAGK+L G+ A CTVRK VL S V
Sbjct: 284 IRYYQERALRRMFSNGRARSGIIVLPCGAGKTLTGIVAACTVRKPIFVLTTSAV 337
>gi|124802985|ref|XP_001347653.1| DNA repair helicase rad25, putative [Plasmodium falciparum 3D7]
gi|23495236|gb|AAN35566.1| DNA repair helicase rad25, putative [Plasmodium falciparum 3D7]
Length = 886
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LK +R YQEK+LRKMF NGR+RSG+IVLPCG GK+L G+TA T++K AL L S V
Sbjct: 381 LKSHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLTGITAASTIKKSALFLTTSAV 440
>gi|70953432|ref|XP_745818.1| helicase [Plasmodium chabaudi chabaudi]
gi|56526257|emb|CAH77830.1| helicase, putative [Plasmodium chabaudi chabaudi]
Length = 872
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ LK +R YQEK+LRKMF NGR+RSG+IVLPCG GK+L G+TA T++K +L L
Sbjct: 365 LNCSLKSHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLTGITAASTIKKSSLFLT 424
Query: 61 NSGV 64
S V
Sbjct: 425 TSAV 428
>gi|82539946|ref|XP_724324.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478932|gb|EAA15889.1| RepB-related [Plasmodium yoelii yoelii]
Length = 870
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ LK +R YQEK+LRKMF NGR+RSG+IVLPCG GK+L G+TA T++K +L L
Sbjct: 363 LNCSLKSHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLTGITAASTIKKSSLFLT 422
Query: 61 NSGV 64
S V
Sbjct: 423 TSAV 426
>gi|389582844|dbj|GAB65581.1| DNA repair helicase [Plasmodium cynomolgi strain B]
Length = 792
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LK +R YQEK+LRKMF NGR+RSG+IVLPCG GK+L G+TA T++K +L L S V
Sbjct: 379 LKSHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLTGITAASTIKKSSLFLTTSAV 438
>gi|221054291|ref|XP_002261893.1| helicase [Plasmodium knowlesi strain H]
gi|193808353|emb|CAQ39057.1| helicase, putative [Plasmodium knowlesi strain H]
Length = 888
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LK +R YQEK+LRKMF NGR+RSG+IVLPCG GK+L G+TA T++K +L L S V
Sbjct: 384 LKSHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLTGITAASTIKKSSLFLTTSAV 443
>gi|156081817|ref|XP_001608401.1| DNA repair helicase [Plasmodium vivax Sal-1]
gi|148800972|gb|EDL42377.1| DNA repair helicase, putative [Plasmodium vivax]
Length = 900
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LK +R YQEK+LRKMF NGR+RSG+IVLPCG GK+L G+TA T++K +L L S V
Sbjct: 396 LKSHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLTGITAASTIKKSSLFLTTSAV 455
>gi|68070877|ref|XP_677352.1| helicase [Plasmodium berghei strain ANKA]
gi|56497437|emb|CAI00041.1| helicase, putative [Plasmodium berghei]
Length = 876
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ LK +R YQEK+LRKMF NGR+RSG+IVLPCG GK+L G+TA T++K +L L
Sbjct: 369 LNCSLKNHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLTGITAASTIKKSSLFLT 428
Query: 61 NSGV 64
S V
Sbjct: 429 TSAV 432
>gi|123492544|ref|XP_001326086.1| DNA repair helicase rad25 family protein [Trichomonas vaginalis G3]
gi|121908995|gb|EAY13863.1| DNA repair helicase rad25 family protein [Trichomonas vaginalis G3]
Length = 744
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LK + +RPYQEK+L KMF GR+ SG+IVLPCGAGK+LVG+ A T+ K +++C
Sbjct: 289 LGIQLKNTTRIRPYQEKALTKMFSGGRSISGIIVLPCGAGKTLVGIAALATINKPTVIVC 348
Query: 61 NS 62
N+
Sbjct: 349 NN 350
>gi|399216282|emb|CCF72970.1| unnamed protein product [Babesia microti strain RI]
Length = 750
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 45/60 (75%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+K + +R YQE++L +MF NGRARSG+IVLPCGAGK+L G+ A CT+ K LVL S V
Sbjct: 272 VKSNTKIRYYQERALCRMFSNGRARSGIIVLPCGAGKTLTGIIAACTISKSVLVLTTSAV 331
>gi|330040674|ref|XP_003239990.1| DNA repair helicase [Cryptomonas paramecium]
gi|327206916|gb|AEA39092.1| DNA repair helicase [Cryptomonas paramecium]
Length = 624
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 51/64 (79%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ ID P+A +R YQEKSL K+F GRARSGVIVLPCGAGK+++G+ A C ++K +LV+C
Sbjct: 203 IKIDFSPTAYIRNYQEKSLSKIFNKGRARSGVIVLPCGAGKTIIGIIAVCIIKKISLVVC 262
Query: 61 NSGV 64
NS V
Sbjct: 263 NSTV 266
>gi|397648048|gb|EJK77960.1| hypothetical protein THAOC_00170, partial [Thalassiosira oceanica]
Length = 594
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 29/91 (31%)
Query: 3 IDLKPSAVLRPYQEKSLRK-----------------------------MFGNGRARSGVI 33
+DLKP +R YQE+SL K MFGNGRARSG+I
Sbjct: 278 MDLKPHTRIRRYQERSLSKVRAFIILDRRLRCAEGLLSVLTDVHTQFQMFGNGRARSGII 337
Query: 34 VLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
VLPCGAGK+L GVTA T++K + LC + V
Sbjct: 338 VLPCGAGKTLTGVTAAQTIKKSVVCLCTNAV 368
>gi|321466391|gb|EFX77387.1| hypothetical protein DAPPUDRAFT_247765 [Daphnia pulex]
Length = 206
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 1 MTIDLKPSAV--LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALV 58
+ I+LKP+A+ +RPYQ+ L K F + RA SG+I PC AG+SLV V ACC V K AL+
Sbjct: 20 INIELKPAALDLIRPYQKDCLLKTFAHDRAHSGLICFPCVAGRSLVVVAACCKVHKMALI 79
Query: 59 LCNSGVV 65
LC+S +V
Sbjct: 80 LCSSELV 86
>gi|118400703|ref|XP_001032673.1| DNA repair helicase rad25 family protein [Tetrahymena thermophila]
gi|89287017|gb|EAR85010.1| DNA repair helicase rad25 family protein [Tetrahymena thermophila
SB210]
Length = 832
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+LKP +R YQE++L+ +F +ARSG+I+LPCGAGK++VGV A +++ +++C
Sbjct: 338 LEIELKPKIKVRYYQERALKNIFIQKKARSGLIILPCGAGKTIVGVIAIERIKQSTVIIC 397
Query: 61 NSGV 64
+S V
Sbjct: 398 DSDV 401
>gi|328770595|gb|EGF80636.1| hypothetical protein BATDEDRAFT_33160 [Batrachochytrium
dendrobatidis JAM81]
Length = 769
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSG----VIVLPCGAGKSLVGVTACCTVRKRA 56
+ IDL P +R YQEK L KMFG G + +IVLP GAGK+LVG+TA CTV+K
Sbjct: 282 LDIDLSPKTTIRDYQEKCLSKMFGGGASGGRARSGIIVLPTGAGKTLVGITAACTVKKST 341
Query: 57 LVLCNSGV 64
LVLC + +
Sbjct: 342 LVLCTNAL 349
>gi|407034427|gb|EKE37204.1| DNA repair helicase, putative [Entamoeba nuttalli P19]
Length = 651
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 41/52 (78%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LRP+QE++L+++F N ARSG++VLPCGAGK+L + AC +++ +VL ++
Sbjct: 229 LRPHQERALQQIFDNEMARSGIVVLPCGAGKTLTAIAACSKIKRSTIVLTHT 280
>gi|167392006|ref|XP_001739987.1| rad25/xp-B DNA repair helicase [Entamoeba dispar SAW760]
gi|165896120|gb|EDR23627.1| rad25/xp-B DNA repair helicase, putative [Entamoeba dispar SAW760]
Length = 651
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 41/52 (78%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LRP+QE++L+++F N ARSG++VLPCGAGK+L + AC +++ +VL ++
Sbjct: 229 LRPHQERALQQIFDNEMARSGIVVLPCGAGKTLTAIAACSKIKRSTIVLTHT 280
>gi|67467062|ref|XP_649651.1| DNA repair helicase [Entamoeba histolytica HM-1:IMSS]
gi|56466136|gb|EAL44265.1| DNA repair helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709415|gb|EMD48686.1| rad25/xpB DNA repair helicase, putative [Entamoeba histolytica
KU27]
Length = 648
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 41/52 (78%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LRP+QE++L+++F N ARSG++VLPCGAGK+L + AC +++ +VL ++
Sbjct: 229 LRPHQERALQQIFDNEMARSGIVVLPCGAGKTLTAIAACSKIKRSTIVLTHT 280
>gi|440298661|gb|ELP91292.1| DNA repair helicase XPB2, putative [Entamoeba invadens IP1]
Length = 632
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 41/55 (74%)
Query: 8 SAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
S L P+Q K+L++MF N ARSG+IVLPCG+GK+L + AC +++ A+V+ NS
Sbjct: 228 SDCLHPHQAKALQQMFDNEIARSGIIVLPCGSGKTLTAIAACMKIKRSAVVIGNS 282
>gi|340506420|gb|EGR32554.1| hypothetical protein IMG5_077910 [Ichthyophthirius multifiliis]
Length = 736
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 47/64 (73%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ +D++P +R YQEK+L+ +F +ARSG+I+LP GAGK++VGV A +++ +V+C
Sbjct: 253 LQMDIQPKMKIRYYQEKALKNIFIEQKARSGLIILPYGAGKTIVGVIAIERIKQSTIVIC 312
Query: 61 NSGV 64
+S V
Sbjct: 313 DSDV 316
>gi|342180398|emb|CCC89875.1| putative DNA repair helicase and transcription factor protein
[Trypanosoma congolense IL3000]
Length = 937
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++L + LRPYQ SL + +A GVIVLPCGAGK+L G+ A TV+KR +V+C
Sbjct: 380 LELSENVRLRPYQVASLERFRSGNKAHQGVIVLPCGAGKTLTGIGAAATVKKRTIVMC 437
>gi|261327256|emb|CBH10232.1| DNA repair helicase and transcription factor protein, putative
[Trypanosoma brucei gambiense DAL972]
Length = 938
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++L + LRPYQ SL + +A GVIVLPCGAGK+L G+ A TV+KR +V+C
Sbjct: 375 LELSENVRLRPYQVASLERFRSGNKAHQGVIVLPCGAGKTLTGIGAAATVKKRTIVMC 432
>gi|72387351|ref|XP_844100.1| DNA repair helicase and transcription factor protein [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|62360608|gb|AAX81019.1| DNA repair helicase and transcription factor protein, putative
[Trypanosoma brucei]
gi|70800632|gb|AAZ10541.1| DNA repair helicase and transcription factor protein, putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 938
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++L + LRPYQ SL + +A GVIVLPCGAGK+L G+ A TV+KR +V+C
Sbjct: 375 LELSENVRLRPYQVASLERFRSGNKAHQGVIVLPCGAGKTLTGIGAAATVKKRTIVMC 432
>gi|440803695|gb|ELR24578.1| DNA repair helicase rad25 subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 560
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+LK +RPYQ+++ +F + +A S ++VLPCGAGK+LVG+T ++K LV C
Sbjct: 99 LAINLKEGTGVRPYQKRAAFSLFWDNKAHSSILVLPCGAGKTLVGITVSSIIKKCILVFC 158
Query: 61 NS 62
S
Sbjct: 159 TS 160
>gi|340052988|emb|CCC47274.1| putative DNA repair helicase and transcription factor protein,
fragment [Trypanosoma vivax Y486]
Length = 922
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
++L A LRPYQ SL + +A G+IVLPCGAGK+L G+ A V+KR +V+C
Sbjct: 367 LELAGHARLRPYQVASLERFRSGNKAHQGIIVLPCGAGKTLTGIGAATIVKKRTIVMC 424
>gi|407848115|gb|EKG03589.1| DNA repair helicase and transcription factor protein [Trypanosoma
cruzi]
Length = 778
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 38/64 (59%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ + LK RPYQ ++ G RSG IVLPCGAGK+LVG+ C V+K L+LC
Sbjct: 191 INVMLKTQTKPRPYQIDAVNAAATEGSLRSGCIVLPCGAGKTLVGIMLLCKVKKPTLILC 250
Query: 61 NSGV 64
GV
Sbjct: 251 AGGV 254
>gi|145479837|ref|XP_001425941.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393013|emb|CAK58543.1| unnamed protein product [Paramecium tetraurelia]
Length = 645
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 39/51 (76%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
L +Q ++L+K+F N +A SGVI+LPCGAGK+L+G+ ++++ L++C+
Sbjct: 219 LYSHQNRALKKIFQNDKAHSGVIILPCGAGKTLLGINVALKIKRKTLIICD 269
>gi|295696317|ref|YP_003589555.1| type III restriction protein res subunit [Kyrpidia tusciae DSM
2912]
gi|295411919|gb|ADG06411.1| type III restriction protein res subunit [Kyrpidia tusciae DSM
2912]
Length = 553
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGR-ARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+ + LK + +LRPYQE++++ F GR SGV+VLPCG+GK++VG+ R++ LVL
Sbjct: 166 LDVALKGTVILRPYQEEAVQAFFDEGRHGGSGVVVLPCGSGKTIVGLAVMARYRRQTLVL 225
Query: 60 CNS 62
++
Sbjct: 226 TST 228
>gi|71650415|ref|XP_813906.1| DNA repair helicase and transcription factor protein [Trypanosoma
cruzi strain CL Brener]
gi|70878833|gb|EAN92055.1| DNA repair helicase and transcription factor protein, putative
[Trypanosoma cruzi]
Length = 925
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 2 TIDLKPSAV-----LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRA 56
T+D++ A+ LRPYQ SL + +A GVIVLPCGAGK+L G+ A ++KR
Sbjct: 361 TLDVRDLALAEHVRLRPYQVASLERFRCGNKAHQGVIVLPCGAGKTLTGIGAATILKKRT 420
Query: 57 LVLC 60
+V+C
Sbjct: 421 IVMC 424
>gi|342186621|emb|CCC96108.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 779
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LK RPYQ ++ +G RSG IVLPCGAGK+LVGV C V+K L+LC
Sbjct: 191 VNIALKAQTKPRPYQIDAVDAATADGSLRSGCIVLPCGAGKTLVGVMLLCKVKKPTLILC 250
Query: 61 NSGV 64
G+
Sbjct: 251 TGGI 254
>gi|407832348|gb|EKF98418.1| DNA repair helicase [Trypanosoma cruzi]
Length = 925
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
LRPYQ SL + +A GVIVLPCGAGK+L G+ A ++KR +V+C
Sbjct: 375 LRPYQVASLERFRCGNKAHQGVIVLPCGAGKTLTGIGAATILKKRTIVMC 424
>gi|71417712|ref|XP_810636.1| DNA repair helicase and transcription factor protein [Trypanosoma
cruzi strain CL Brener]
gi|70875197|gb|EAN88785.1| DNA repair helicase and transcription factor protein, putative
[Trypanosoma cruzi]
Length = 925
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
LRPYQ SL + +A GVIVLPCGAGK+L G+ A ++KR +V+C
Sbjct: 375 LRPYQVASLERFRCGNKAHQGVIVLPCGAGKTLTGIGAATILKKRTIVMC 424
>gi|407408839|gb|EKF32113.1| DNA repair helicase and transcription factor protein [Trypanosoma
cruzi marinkellei]
Length = 778
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ + LK RPYQ ++ G RSG IVLPCGAGK+LVG+ C V+K L+LC
Sbjct: 191 INVMLKTQTKPRPYQIDAVNAAATEGSLRSGCIVLPCGAGKTLVGIMLLCKVKKPTLILC 250
Query: 61 NSGV 64
V
Sbjct: 251 TGSV 254
>gi|145525669|ref|XP_001448651.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416206|emb|CAK81254.1| unnamed protein product [Paramecium tetraurelia]
Length = 708
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+LKPS R YQ ++ + + A+SG+IVLPCGAGK+LVGV ++ +++C
Sbjct: 254 LDINLKPSTKPRLYQLRAAKTVIMGDYAKSGLIVLPCGAGKTLVGVLCMSLIKSSTVIIC 313
Query: 61 NSGV 64
+S V
Sbjct: 314 DSNV 317
>gi|71415150|ref|XP_809651.1| DNA repair helicase [Trypanosoma cruzi strain CL Brener]
gi|70874067|gb|EAN87800.1| DNA repair helicase, putative [Trypanosoma cruzi]
Length = 778
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ + LK RPYQ ++ G RSG IVLPCGAGK+LVG+ C V+K L+LC
Sbjct: 191 INVMLKTQTKPRPYQIDAVNAAATEGSLRSGCIVLPCGAGKTLVGIMLLCKVKKPTLILC 250
Query: 61 NSGV 64
V
Sbjct: 251 AGSV 254
>gi|407410785|gb|EKF33098.1| DNA repair helicase and transcription factor protein [Trypanosoma
cruzi marinkellei]
Length = 737
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
LRPYQ SL + +A GVIVLPCGAGK+L G+ A ++KR +V+C
Sbjct: 187 LRPYQVASLERFRCGNKAHQGVIVLPCGAGKTLTGIGAATILKKRTIVMC 236
>gi|384500729|gb|EIE91220.1| hypothetical protein RO3G_15931 [Rhizopus delemar RA 99-880]
Length = 619
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNG----RARSGVIVLPCGAGKSLVGVTACCTVRKRA 56
+ IDL+P +RPYQ+++L + ARSG+IVLPCGAGK+L + ++K
Sbjct: 75 LDIDLRPEIEVRPYQQEALDAIVDKTCDPPVARSGIIVLPCGAGKTLTSILVAAAIKKPI 134
Query: 57 LVLCNS 62
LV+C++
Sbjct: 135 LVVCST 140
>gi|440295401|gb|ELP88314.1| rad25/xp-B DNA repair helicase, putative [Entamoeba invadens IP1]
Length = 605
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
L+ VLR YQ ++ +F N R + G+IVLPCGAGK+L+ + C +++ ++++C S
Sbjct: 190 LRDERVLRDYQVSAISSVFENNRVKCGIIVLPCGAGKTLLSIALICGMQQMSIIICTS 247
>gi|156392034|ref|XP_001635854.1| predicted protein [Nematostella vectensis]
gi|156222952|gb|EDO43791.1| predicted protein [Nematostella vectensis]
Length = 734
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 8 SAVLRPYQEKSLRKMF--GNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
S V PY S F G G + LP GAGK+LVGVTA CTVRKR LVLC SGV
Sbjct: 266 STVPHPYWSFSYHFFFKLGGGHMFLTCLYLPPGAGKTLVGVTAACTVRKRCLVLCTSGV 324
>gi|74026236|ref|XP_829684.1| DNA repair helicase and transcription factor protein [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|70835070|gb|EAN80572.1| DNA repair helicase and transcription factor protein, putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 777
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LK RPYQ ++ +G RSG IVLPCG+GK+LVG+ C V+K L+LC
Sbjct: 191 VNIALKSQTRPRPYQIAAVDAAASDGALRSGCIVLPCGSGKTLVGIMLLCKVKKPTLILC 250
Query: 61 NSGV 64
GV
Sbjct: 251 AGGV 254
>gi|261335713|emb|CBH18707.1| DNA repair helicase and transcription factor protein, putative
[Trypanosoma brucei gambiense DAL972]
Length = 777
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LK RPYQ ++ +G RSG IVLPCG+GK+LVG+ C V+K L+LC
Sbjct: 191 VNIALKSQTRPRPYQIAAVDAAASDGALRSGCIVLPCGSGKTLVGIMLLCKVKKPTLILC 250
Query: 61 NSGV 64
GV
Sbjct: 251 AGGV 254
>gi|340059837|emb|CCC54234.1| putative DNA repair helicase and transcription factor protein,
fragment, partial [Trypanosoma vivax Y486]
Length = 584
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LK RPYQ ++ +G RSG IVLPCGAGK+LVG+ C V+K L+LC
Sbjct: 217 INIMLKTQTKPRPYQIDAVDAAVSDGFLRSGCIVLPCGAGKTLVGIMLLCKVKKPTLILC 276
Query: 61 NSGV 64
V
Sbjct: 277 AGSV 280
>gi|389602007|ref|XP_001566408.2| putative DNA repair helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505277|emb|CAM39916.2| putative DNA repair helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1108
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC-NSGVVF 66
LRPYQ SL + RA GVIVLPCGAGK+L G+ A T++ +V+C N+ VF
Sbjct: 481 LRPYQVASLERFRRGQRAHQGVIVLPCGAGKTLTGIGAAATMQTTTIVMCINNMSVF 537
>gi|339898776|ref|XP_001466580.2| putative DNA repair helicase [Leishmania infantum JPCM5]
gi|321398503|emb|CAM69619.2| putative DNA repair helicase [Leishmania infantum JPCM5]
Length = 1106
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC-N 61
++L LRPYQ SL + +A GVIVLPCGAGK+L G+ A T++ +V+C N
Sbjct: 471 LNLASHVRLRPYQVASLERFCRGRKAHQGVIVLPCGAGKTLTGIGAAATMQTTTIVMCIN 530
Query: 62 SGVVF 66
+ VF
Sbjct: 531 NMSVF 535
>gi|398018627|ref|XP_003862478.1| DNA repair helicase, putative [Leishmania donovani]
gi|322500708|emb|CBZ35785.1| DNA repair helicase, putative [Leishmania donovani]
Length = 1106
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC-N 61
++L LRPYQ SL + +A GVIVLPCGAGK+L G+ A T++ +V+C N
Sbjct: 471 LNLASHVRLRPYQVASLERFCRGRKAHQGVIVLPCGAGKTLTGIGAAATMQTTTIVMCIN 530
Query: 62 SGVVF 66
+ VF
Sbjct: 531 NMSVF 535
>gi|340500260|gb|EGR27154.1| hypothetical protein IMG5_200940 [Ichthyophthirius multifiliis]
Length = 513
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 16 EKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
E +L +F +G+ARSG+IVLPCGAGK+L+G+ +++ LV+C+
Sbjct: 92 ENTLENIFISGKARSGIIVLPCGAGKTLLGIIVAEKIKRSTLVICD 137
>gi|443309230|ref|ZP_21038971.1| DNA/RNA helicase, superfamily II [Synechocystis sp. PCC 7509]
gi|442780727|gb|ELR90879.1| DNA/RNA helicase, superfamily II [Synechocystis sp. PCC 7509]
Length = 562
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ++++ + GRA+ SGVIVLPCGAGK++VG+ A TV+ LVL +S
Sbjct: 189 LRHYQKEAVAAFYQAGRAQGGSGVIVLPCGAGKTMVGLAAMTTVQSNTLVLTSS 242
>gi|389593769|ref|XP_003722133.1| putative DNA repair helicase [Leishmania major strain Friedlin]
gi|321438631|emb|CBZ12390.1| putative DNA repair helicase [Leishmania major strain Friedlin]
Length = 1106
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
LRPYQ SL + +A GVIVLPCGAGK+L G+ A T++ +V+C
Sbjct: 479 LRPYQVASLERFRRGRKAHQGVIVLPCGAGKTLTGIGAAATMQTTTIVMC 528
>gi|427706036|ref|YP_007048413.1| type III restriction protein res subunit [Nostoc sp. PCC 7107]
gi|427358541|gb|AFY41263.1| type III restriction protein res subunit [Nostoc sp. PCC 7107]
Length = 556
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+LR YQ ++ + +GR + SGVIVLPCGAGK++VG+TA V++ LVL S
Sbjct: 188 LLRDYQSQAAEAFYQSGRVQGGSGVIVLPCGAGKTIVGMTAIAAVQESTLVLSTS 242
>gi|390566548|ref|ZP_10246916.1| Type III restriction protein res subunit [Nitrolancetus hollandicus
Lb]
gi|390170199|emb|CCF86268.1| Type III restriction protein res subunit [Nitrolancetus hollandicus
Lb]
Length = 529
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ DL+P LRPYQ +++ + G + GV++LPCGAGK++VG+ A ++ R L++
Sbjct: 165 LPFDLRPEVRLRPYQVEAVERFVERGES-GGVVLLPCGAGKTVVGIAAAARLKARTLIVT 223
Query: 61 NSGVV 65
S +
Sbjct: 224 PSRTI 228
>gi|401416016|ref|XP_003872503.1| putative DNA repair helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488727|emb|CBZ23974.1| putative DNA repair helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1103
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC-NSGVVF 66
LRPYQ SL + +A GV+VLPCGAGK+L G+ A T++ +V+C N+ VF
Sbjct: 479 LRPYQVASLERFRRGQKAHQGVVVLPCGAGKTLTGIGAAATMQTTTIVMCINNMSVF 535
>gi|118365862|ref|XP_001016150.1| Helicase conserved C-terminal domain containing protein
[Tetrahymena thermophila]
gi|89297917|gb|EAR95905.1| Helicase conserved C-terminal domain containing protein
[Tetrahymena thermophila SB210]
Length = 683
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I LK + R YQ+K+L+ +F + RS IVLPCGAGK+L+G+ ++ +V+C
Sbjct: 239 LDIKLKQTTQPRIYQQKALKNIFVCEKPRSATIVLPCGAGKTLLGIILTERIKGNTIVIC 298
Query: 61 N 61
+
Sbjct: 299 D 299
>gi|167386165|ref|XP_001733392.1| rad25/xp-B DNA repair helicase [Entamoeba dispar SAW760]
gi|165899480|gb|EDR26066.1| rad25/xp-B DNA repair helicase, putative [Entamoeba dispar SAW760]
Length = 624
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRK 54
+ I LK VLR YQ K + +F G A+SG+I+LPCG+GK+L+ + C ++
Sbjct: 180 INISLKDDTVLRTYQIKGINSVFKKGFAQSGIIILPCGSGKTLMSIGIICKFQE 233
>gi|17232195|ref|NP_488743.1| DNA repair helicase [Nostoc sp. PCC 7120]
gi|17133840|dbj|BAB76402.1| DNA repair helicase [Nostoc sp. PCC 7120]
Length = 563
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+LR YQ ++ + +GR + SGVIVLPCGAGK++VG++A V++ L+L S
Sbjct: 188 LLRDYQRQAAEAFYQSGRVQGGSGVIVLPCGAGKTIVGMSAIAAVQENTLILSTS 242
>gi|407044253|gb|EKE42473.1| DNA repair helicase, putative [Entamoeba nuttalli P19]
Length = 589
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRK 54
+ I LK VLR YQ + +F G A+SG+I+LPCGAGK+L+ + CT ++
Sbjct: 177 IPIALKDDTVLRKYQISGISSVFRKGFAQSGIIILPCGAGKTLMTIGIICTFQQ 230
>gi|67479133|ref|XP_654948.1| DNA repair helicase [Entamoeba histolytica HM-1:IMSS]
gi|56472042|gb|EAL49560.1| DNA repair helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703271|gb|EMD43753.1| rad25/xpB DNA repair helicase, putative [Entamoeba histolytica
KU27]
Length = 589
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRK 54
+ I LK VLR YQ + +F G A+SG+I+LPCGAGK+L+ + CT ++
Sbjct: 177 IPIALKDDTVLRKYQISGISSVFRKGFAQSGIIILPCGAGKTLMTIGIICTFQQ 230
>gi|421858960|ref|ZP_16291209.1| DNA or RNA helicase [Paenibacillus popilliae ATCC 14706]
gi|410831479|dbj|GAC41646.1| DNA or RNA helicase [Paenibacillus popilliae ATCC 14706]
Length = 561
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 7 PSAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSG 63
PS LRPYQ+ ++ G G A GVIVLPCGAGK+++G+ A ++ L+L ++
Sbjct: 175 PSFSLRPYQQDAVAAFIGAGMRAAGDGVIVLPCGAGKTIIGLAAMTALQSETLILTSNA 233
>gi|146164780|ref|XP_001470758.1| rad25/xp-B DNA repair helicase [Tetrahymena thermophila]
gi|146145659|gb|EDK31797.1| rad25/xp-B DNA repair helicase [Tetrahymena thermophila SB210]
Length = 698
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+ I+L+ R YQ+K+L+ +F + RS IVLPCGAGK+L+G+ ++ +V+C
Sbjct: 244 LDIELRQITQPRIYQQKALKNIFVCEKPRSATIVLPCGAGKTLLGIIVTEKIKGNTIVIC 303
Query: 61 N 61
+
Sbjct: 304 D 304
>gi|416374985|ref|ZP_11683267.1| DNA repair helicase [Crocosphaera watsonii WH 0003]
gi|357266616|gb|EHJ15220.1| DNA repair helicase [Crocosphaera watsonii WH 0003]
Length = 555
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
VLRPYQ ++ + +GR + SGVI LPCGAGK++VG+ A V++ L+L S
Sbjct: 190 VLRPYQLEAADVFYQSGRVQGGSGVICLPCGAGKTIVGMAAMAQVQENTLILTTS 244
>gi|67920111|ref|ZP_00513631.1| Helicase, C-terminal:Type III restriction enzyme, res
subunit:DEAD/DEAH box helicase, N-terminal [Crocosphaera
watsonii WH 8501]
gi|67857595|gb|EAM52834.1| Helicase, C-terminal:Type III restriction enzyme, res
subunit:DEAD/DEAH box helicase, N-terminal [Crocosphaera
watsonii WH 8501]
Length = 555
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
VLRPYQ ++ + +GR + SGVI LPCGAGK++VG+ A V++ L+L S
Sbjct: 190 VLRPYQLEAADVFYQSGRVQGGSGVICLPCGAGKTIVGMAAMAQVQENTLILTTS 244
>gi|377574780|ref|ZP_09803795.1| putative ATP-dependent DNA helicase [Mobilicoccus pelagius NBRC
104925]
gi|377536485|dbj|GAB48960.1| putative ATP-dependent DNA helicase [Mobilicoccus pelagius NBRC
104925]
Length = 543
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQE ++ + G SGV+VLPCGAGK+LVG A R LVL + V
Sbjct: 181 LRPYQEHAVEGFWHGG---SGVVVLPCGAGKTLVGAAAMARARSTTLVLVTNTV 231
>gi|401427509|ref|XP_003878238.1| putative DNA repair helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494485|emb|CBZ29787.1| putative DNA repair helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 806
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
I L+ R YQ +++ +G SG ++LPCGAGK+L+G+ C V+K LV+C
Sbjct: 211 ISLRTQTKPRRYQIEAVDAAIHDGTLNSGCLLLPCGAGKTLLGIMLMCKVKKPTLVVCAG 270
Query: 63 GV 64
GV
Sbjct: 271 GV 272
>gi|430746995|ref|YP_007206124.1| DNA/RNA helicase [Singulisphaera acidiphila DSM 18658]
gi|430018715|gb|AGA30429.1| DNA/RNA helicase, superfamily II [Singulisphaera acidiphila DSM
18658]
Length = 570
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+R YQ ++ G AR SGV+VLPCGAGK++VG+TA ++K LVL S
Sbjct: 189 VRDYQRGAVDAFHAGGDARGGSGVVVLPCGAGKTIVGLTALAALKKNTLVLTTS 242
>gi|434385348|ref|YP_007095959.1| DNA/RNA helicase, superfamily II [Chamaesiphon minutus PCC 6605]
gi|428016338|gb|AFY92432.1| DNA/RNA helicase, superfamily II [Chamaesiphon minutus PCC 6605]
Length = 556
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ +++ + G AR SG IVLPCGAGK++VG+ A T+++ L+L +S
Sbjct: 189 LRDYQTEAVAAFYQAGLARGGSGTIVLPCGAGKTMVGLAAIATIQENTLILTSS 242
>gi|339628705|ref|YP_004720348.1| DEAD/DEAH box helicase [Sulfobacillus acidophilus TPY]
gi|379008866|ref|YP_005258317.1| type III restriction protein res subunit [Sulfobacillus acidophilus
DSM 10332]
gi|339286494|gb|AEJ40605.1| DEAD/DEAH box helicase-like protein [Sulfobacillus acidophilus TPY]
gi|361055128|gb|AEW06645.1| type III restriction protein res subunit [Sulfobacillus acidophilus
DSM 10332]
Length = 574
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQE ++R +G+G A+ SGVIVLPCGAGK++VG+ + L+L S
Sbjct: 187 LRTYQEAAIRVFWGDGEAQRGSGVIVLPCGAGKTVVGMGVMERAQTHTLILTTS 240
>gi|403378912|ref|ZP_10920969.1| putative ATP-dependent helicase [Paenibacillus sp. JC66]
Length = 566
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMF--GNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQE+++ + G+ SGV++LPCGAGK+++G+ A C ++ L+L
Sbjct: 190 LRPYQEQAVEAFYREGSRHGGSGVLILPCGAGKTVIGIGAMCRLQCATLIL 240
>gi|357400022|ref|YP_004911947.1| ATP-dependent DNA helicase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386356062|ref|YP_006054308.1| helicase domain-containing protein [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|337766431|emb|CCB75142.1| putative ATP-dependent DNA helicase [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365806569|gb|AEW94785.1| helicase domain protein [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 550
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG A T + L+L + V
Sbjct: 181 LRPYQRQAVESFWHGG---SGVVVLPCGAGKTLVGAGAMATAKSTTLILVTNTV 231
>gi|374987682|ref|YP_004963177.1| putative ATP-dependent DNA helicase [Streptomyces bingchenggensis
BCW-1]
gi|297158334|gb|ADI08046.1| putative ATP-dependent DNA helicase [Streptomyces bingchenggensis
BCW-1]
Length = 551
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A T + L+L + V
Sbjct: 180 LRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMATAKSTTLILVTNTV 230
>gi|392403571|ref|YP_006440183.1| helicase domain-containing protein [Turneriella parva DSM 21527]
gi|390611525|gb|AFM12677.1| helicase domain-containing protein [Turneriella parva DSM 21527]
Length = 583
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
V+R YQE S++ + +G SGV+VLPCGAGK++VG+ A V + L+L
Sbjct: 189 VIRDYQESSIKAFYADGSVEGGSGVVVLPCGAGKTIVGIGAMHAVGAQTLIL 240
>gi|418475464|ref|ZP_13044861.1| ATP-dependent DNA helicase [Streptomyces coelicoflavus ZG0656]
gi|371543924|gb|EHN72687.1| ATP-dependent DNA helicase [Streptomyces coelicoflavus ZG0656]
Length = 548
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL LRPYQ++++ + G SGV+VLPCGAGK+LVG A R L+L
Sbjct: 172 IDLAEDGWALRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGAMAQARSTTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|84498512|ref|ZP_00997282.1| putative ATP-dependent DNA helicase [Janibacter sp. HTCC2649]
gi|84381255|gb|EAP97139.1| putative ATP-dependent DNA helicase [Janibacter sp. HTCC2649]
Length = 545
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLC 60
+T+D V+RPYQ++++ + G SGV+VLPCGAGK+LVG A L+L
Sbjct: 172 ITLDQSDGWVMRPYQQQAVDGFWDGG---SGVVVLPCGAGKTLVGAGAMAKASATTLILV 228
Query: 61 NSGV 64
+ V
Sbjct: 229 TNTV 232
>gi|449067324|ref|YP_007434406.1| XPB/RAD25-related helicase [Sulfolobus acidocaldarius N8]
gi|449069594|ref|YP_007436675.1| XPB/RAD25-related helicase [Sulfolobus acidocaldarius Ron12/I]
gi|449035832|gb|AGE71258.1| XPB/RAD25-related helicase [Sulfolobus acidocaldarius N8]
gi|449038102|gb|AGE73527.1| XPB/RAD25-related helicase [Sulfolobus acidocaldarius Ron12/I]
Length = 543
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+D++ LR YQ+++L K G SGVI LP GAGK+L+G++A C V++ L++
Sbjct: 152 LDIEFKGELREYQKEALSKWLEKG---SGVIALPTGAGKTLIGISAACAVKQSTLIV 205
>gi|70607084|ref|YP_255954.1| XPB/RAD25-related helicase [Sulfolobus acidocaldarius DSM 639]
gi|68567732|gb|AAY80661.1| XPB/RAD25-related helicase [Sulfolobus acidocaldarius DSM 639]
Length = 467
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+D++ LR YQ+++L K G SGVI LP GAGK+L+G++A C V++ L++
Sbjct: 76 LDIEFKGELREYQKEALSKWLEKG---SGVIALPTGAGKTLIGISAACAVKQSTLIV 129
>gi|157874471|ref|XP_001685718.1| putative DNA repair helicase [Leishmania major strain Friedlin]
gi|68128790|emb|CAJ08923.1| putative DNA repair helicase [Leishmania major strain Friedlin]
Length = 806
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
I L+ R YQ +++ +G SG ++LPCGAGK+L+G+ C V+K LVLC
Sbjct: 211 ISLRTQTKPRRYQIEAVDAAIHDGTLNSGCLLLPCGAGKTLLGIMLMCKVKKPTLVLCAG 270
Query: 63 GV 64
V
Sbjct: 271 SV 272
>gi|154343637|ref|XP_001567764.1| putative DNA repair helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065096|emb|CAM43210.1| putative DNA repair helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 803
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
I L+ R YQ +++ +G SG I+LPCGAGK+L+G+ C V+K LV+C
Sbjct: 211 ISLRTQTKPRRYQIEAVDAAIHDGTLNSGCILLPCGAGKTLLGIMLMCKVKKPTLVVCAG 270
Query: 63 GV 64
V
Sbjct: 271 SV 272
>gi|374606946|ref|ZP_09679760.1| type III restriction protein res subunit [Paenibacillus
dendritiformis C454]
gi|374387451|gb|EHQ58959.1| type III restriction protein res subunit [Paenibacillus
dendritiformis C454]
Length = 561
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSG 63
S LRPYQ+ ++ G+G A GVIVLPCGAGK++VG+ A ++ L+L ++
Sbjct: 176 SFSLRPYQQDAVAAFIGSGTRAAGDGVIVLPCGAGKTIVGLAAMSALQSETLILTSNA 233
>gi|308160768|gb|EFO63241.1| DNA repair helicase TFIIH P90 [Giardia lamblia P15]
Length = 765
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 5 LKPSAVLRPYQEKSLRKMFGN---------GRARSGVIVLPCGAGKSLVGVTACCTVRKR 55
LKP+ LR YQ+ + +K+ R SG++VLPCGAGKSL+GV C +
Sbjct: 301 LKPTTDLRDYQDHASKKVISEVQLDTSQVVKRCNSGLVVLPCGAGKSLLGVACACRLGHS 360
Query: 56 ALVLCNSGV 64
+V+ N +
Sbjct: 361 CIVVTNGNL 369
>gi|159111749|ref|XP_001706105.1| DNA repair helicase TFIIH P90 [Giardia lamblia ATCC 50803]
gi|157434198|gb|EDO78431.1| DNA repair helicase TFIIH P90 [Giardia lamblia ATCC 50803]
Length = 765
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 5 LKPSAVLRPYQEKSLRKMFGN---------GRARSGVIVLPCGAGKSLVGVTACCTVRKR 55
LKP+ LR YQ+ + +K+ R SG++VLPCGAGKSL+GV C +
Sbjct: 301 LKPTTDLRDYQDHASKKVISEVQLDTSQIVKRCNSGLVVLPCGAGKSLLGVACACRLGHS 360
Query: 56 ALVLCNSGV 64
+V+ N +
Sbjct: 361 CIVVTNGNL 369
>gi|427716121|ref|YP_007064115.1| type III restriction protein res subunit [Calothrix sp. PCC 7507]
gi|427348557|gb|AFY31281.1| type III restriction protein res subunit [Calothrix sp. PCC 7507]
Length = 556
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ+ + + +G+ + SGVIVLPCGAGK++VG+ A +V++ L+L S
Sbjct: 189 LRDYQKSAAEAFYQSGKVQGGSGVIVLPCGAGKTIVGMAAIASVQESTLILSTS 242
>gi|291303533|ref|YP_003514811.1| type III restriction protein res subunit [Stackebrandtia
nassauensis DSM 44728]
gi|290572753|gb|ADD45718.1| type III restriction protein res subunit [Stackebrandtia
nassauensis DSM 44728]
Length = 549
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
I LK S LRPYQ++++ + G SGV+VLPCGAGK+LVG +K L+L
Sbjct: 173 IGLKESGWQLRPYQKEAVESFWSGG---SGVVVLPCGAGKTLVGAAVMAQAQKTTLILVT 229
Query: 62 SGV 64
+ V
Sbjct: 230 NTV 232
>gi|302544484|ref|ZP_07296826.1| putative ATP-dependent DNA helicase [Streptomyces hygroscopicus
ATCC 53653]
gi|302462102|gb|EFL25195.1| putative ATP-dependent DNA helicase [Streptomyces himastatinicus
ATCC 53653]
Length = 565
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL LRPYQ+ ++ + G SGV+VLPCGAGK+LVG A T + L+L
Sbjct: 172 IDLHEDGWALRPYQKHAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMATAKSTTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|345015973|ref|YP_004818327.1| helicase [Streptomyces violaceusniger Tu 4113]
gi|344042322|gb|AEM88047.1| helicase domain-containing protein [Streptomyces violaceusniger Tu
4113]
Length = 549
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG A T + L+L + V
Sbjct: 181 LRPYQTQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMATAKSTTLILVTNTV 231
>gi|428317195|ref|YP_007115077.1| type III restriction protein res subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428240875|gb|AFZ06661.1| type III restriction protein res subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 561
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ+++ + +G + SG IVLPCGAGK++VG+ A V+++ L+L +S
Sbjct: 192 LRAYQQEAAEAFYQDGEVKGGSGTIVLPCGAGKTIVGMLAMSLVKQKTLILTSS 245
>gi|253745292|gb|EET01319.1| DNA repair helicase TFIIH P90 [Giardia intestinalis ATCC 50581]
Length = 765
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 5 LKPSAVLRPYQEKSLRKMFGN---------GRARSGVIVLPCGAGKSLVGVTACCTVRKR 55
LKP+ LR YQ+ + +K+ R SG++VLPCGAGKSL+GV C +
Sbjct: 301 LKPTTDLRDYQDHASKKVISEVQLDTSQIVKRCNSGLVVLPCGAGKSLLGVACACRLGYS 360
Query: 56 ALVLCNSGV 64
+V+ N +
Sbjct: 361 CIVVTNGNL 369
>gi|408826612|ref|ZP_11211502.1| ATP-dependent DNA helicase [Streptomyces somaliensis DSM 40738]
Length = 547
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL S LRPYQ +++ + G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 172 IDLDESGWALRPYQRQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAQAKATTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|296271247|ref|YP_003653879.1| helicase domain-containing protein [Thermobispora bispora DSM
43833]
gi|296094034|gb|ADG89986.1| helicase domain protein [Thermobispora bispora DSM 43833]
Length = 551
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ ++ + G SGV+VLPCGAGK++VG+ A R L+L + V
Sbjct: 182 LRPYQREAAEAFWHGG---SGVVVLPCGAGKTIVGIAAMALARATTLILVTNAV 232
>gi|168701354|ref|ZP_02733631.1| DNA repair helicase [Gemmata obscuriglobus UQM 2246]
Length = 600
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+R YQ ++ G R SGVIVLPCGAGK++VG+ + C ++K LVL S
Sbjct: 221 VRDYQREAADVFHAGGDVRGGSGVIVLPCGAGKTVVGIASMCLLQKNTLVLTTS 274
>gi|403715128|ref|ZP_10940913.1| putative ATP-dependent DNA helicase [Kineosphaera limosa NBRC
100340]
gi|403210896|dbj|GAB95596.1| putative ATP-dependent DNA helicase [Kineosphaera limosa NBRC
100340]
Length = 547
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL+ LRPYQE+++ + G SGV+VLPCGAGK+LVG A L+L
Sbjct: 172 IDLREDGWALRPYQEQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMARSSTTTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|146097223|ref|XP_001468079.1| putative DNA repair helicase [Leishmania infantum JPCM5]
gi|134072445|emb|CAM71155.1| putative DNA repair helicase [Leishmania infantum JPCM5]
Length = 806
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
I L+ R YQ +++ +G SG ++LPCGAGK+L+G+ C V+K LV+C
Sbjct: 211 ISLRTQTKPRRYQIEAVDAAIHDGTLNSGCLLLPCGAGKTLLGIMLMCKVKKPTLVVCAG 270
Query: 63 GV 64
V
Sbjct: 271 SV 272
>gi|296128585|ref|YP_003635835.1| helicase domain-containing protein [Cellulomonas flavigena DSM
20109]
gi|296020400|gb|ADG73636.1| helicase domain protein [Cellulomonas flavigena DSM 20109]
Length = 548
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL+ LRPYQ++++ F G SGV+VLPCGAGK+LVG A L+L
Sbjct: 173 IDLQEDGWALRPYQQQAVDGFFHGG---SGVVVLPCGAGKTLVGAGAMARSSTTTLILVT 229
Query: 62 SGV 64
+ V
Sbjct: 230 NTV 232
>gi|398021308|ref|XP_003863817.1| helicase, putative [Leishmania donovani]
gi|322502050|emb|CBZ37134.1| helicase, putative [Leishmania donovani]
Length = 806
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
I L+ R YQ +++ +G SG ++LPCGAGK+L+G+ C V+K LV+C
Sbjct: 211 ISLRTHTKPRRYQIEAVDAAIHDGTLNSGCLLLPCGAGKTLLGIMLMCKVKKPTLVVCAG 270
Query: 63 GV 64
V
Sbjct: 271 SV 272
>gi|455648330|gb|EMF27207.1| ATP-dependent DNA helicase [Streptomyces gancidicus BKS 13-15]
Length = 547
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGAMAQAKSTTLILVTNTV 231
>gi|289770106|ref|ZP_06529484.1| ATP-dependent DNA helicase [Streptomyces lividans TK24]
gi|289700305|gb|EFD67734.1| ATP-dependent DNA helicase [Streptomyces lividans TK24]
Length = 548
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 184 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGAMAQAKSTTLILVTNTV 234
>gi|290959478|ref|YP_003490660.1| DNA helicase [Streptomyces scabiei 87.22]
gi|260649004|emb|CBG72118.1| putative DNA helicase [Streptomyces scabiei 87.22]
Length = 546
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 180 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGAMAQAKSTTLILVTNTV 230
>gi|302552290|ref|ZP_07304632.1| ATP-dependent DNA helicase [Streptomyces viridochromogenes DSM
40736]
gi|302469908|gb|EFL33001.1| ATP-dependent DNA helicase [Streptomyces viridochromogenes DSM
40736]
Length = 547
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGAMAQAKSTTLILVTNTV 231
>gi|297200523|ref|ZP_06917920.1| ATP-dependent DNA helicase [Streptomyces sviceus ATCC 29083]
gi|197709647|gb|EDY53681.1| ATP-dependent DNA helicase [Streptomyces sviceus ATCC 29083]
Length = 547
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGAMAQAKSTTLILVTNTV 231
>gi|395769274|ref|ZP_10449789.1| ATP-dependent DNA helicase [Streptomyces acidiscabies 84-104]
Length = 548
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKSTTLILVTNTV 231
>gi|386385428|ref|ZP_10070717.1| helicase domain-containing protein [Streptomyces tsukubaensis
NRRL18488]
gi|385667118|gb|EIF90572.1| helicase domain-containing protein [Streptomyces tsukubaensis
NRRL18488]
Length = 548
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL + LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 172 IDLDETGWALRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMARAKATTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|345854813|ref|ZP_08807609.1| DNA helicase [Streptomyces zinciresistens K42]
gi|345633718|gb|EGX55429.1| DNA helicase [Streptomyces zinciresistens K42]
Length = 546
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 180 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKSTTLILVTNTV 230
>gi|297193652|ref|ZP_06911050.1| ATP-dependent DNA helicase [Streptomyces pristinaespiralis ATCC
25486]
gi|297151855|gb|EDY65705.2| ATP-dependent DNA helicase [Streptomyces pristinaespiralis ATCC
25486]
Length = 551
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL + LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 172 IDLDETGWALRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMARAKATTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|433456109|ref|ZP_20414167.1| helicase domain-containing protein [Arthrobacter crystallopoietes
BAB-32]
gi|432196698|gb|ELK53134.1| helicase domain-containing protein [Arthrobacter crystallopoietes
BAB-32]
Length = 553
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + G SGV+VLPCGAGK+LVG A T L+L + V
Sbjct: 186 LRPYQQVAAENFWAGG---SGVVVLPCGAGKTLVGAAAMATSSTTTLILVTNTV 236
>gi|398783543|ref|ZP_10547006.1| ATP-dependent DNA helicase [Streptomyces auratus AGR0001]
gi|396995855|gb|EJJ06859.1| ATP-dependent DNA helicase [Streptomyces auratus AGR0001]
Length = 550
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQQQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTV 231
>gi|441161070|ref|ZP_20967874.1| ATP-dependent DNA helicase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440616801|gb|ELQ79926.1| ATP-dependent DNA helicase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 547
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
I+L S LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 172 IELDESGWALRPYQQQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMARAKATTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|427422083|ref|ZP_18912266.1| DNA/RNA helicase, superfamily II [Leptolyngbya sp. PCC 7375]
gi|425757960|gb|EKU98814.1| DNA/RNA helicase, superfamily II [Leptolyngbya sp. PCC 7375]
Length = 557
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ+K+ + G A+ SGVIVLPCGAGK++VG+ +++ L+L ++
Sbjct: 190 LRSYQQKAADLFYQAGHAKGGSGVIVLPCGAGKTMVGMATMAAIQQHTLILTSN 243
>gi|338811579|ref|ZP_08623785.1| DEAD/DEAH box helicase-like protein [Acetonema longum DSM 6540]
gi|337276341|gb|EGO64772.1| DEAD/DEAH box helicase-like protein [Acetonema longum DSM 6540]
Length = 569
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LRPYQ +++ NG A SGV+VLPCGAGK+++G+ V+ L+L S
Sbjct: 203 LRPYQNEAVNIFHANGLATGGSGVLVLPCGAGKTVIGLGVMAQVQTNTLILTTS 256
>gi|318061807|ref|ZP_07980528.1| putative ATP-dependent DNA helicase [Streptomyces sp. SA3_actG]
gi|318079252|ref|ZP_07986584.1| putative ATP-dependent DNA helicase [Streptomyces sp. SA3_actF]
Length = 546
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + LVL + V
Sbjct: 180 LRPYQKQAVDNFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLVLVTNTV 230
>gi|433543346|ref|ZP_20499755.1| ATP-dependent helicase [Brevibacillus agri BAB-2500]
gi|432185347|gb|ELK42839.1| ATP-dependent helicase [Brevibacillus agri BAB-2500]
Length = 554
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 6 KPSAVLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
KP A LRPYQ++++ + G A SGV+VLPCGAGK+++G+ A ++ L+L
Sbjct: 180 KPFA-LRPYQQEAVDAFYRGGSALGGSGVLVLPCGAGKTVIGIGAISQLQTATLIL 234
>gi|399052627|ref|ZP_10741929.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
gi|398049483|gb|EJL41902.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
Length = 554
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 6 KPSAVLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
KP A LRPYQ++++ + G A SGV+VLPCGAGK+++G+ A ++ L+L
Sbjct: 180 KPFA-LRPYQQEAVDAFYRGGSALGGSGVLVLPCGAGKTVIGIGAISQLQTATLIL 234
>gi|163839247|ref|YP_001623652.1| DNA/RNA helicase [Renibacterium salmoninarum ATCC 33209]
gi|162952723|gb|ABY22238.1| DNA/RNA helicase (DEAD/DEAH box family) [Renibacterium salmoninarum
ATCC 33209]
Length = 394
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ ++ + G SGV+VLPCGAGK+LVG A T L+L + V
Sbjct: 75 LRPYQKLAVENFWAGG---SGVVVLPCGAGKTLVGAAAMATSGTTTLILVTNTV 125
>gi|395203324|ref|ZP_10394558.1| DEAD/DEAH box helicase [Propionibacterium humerusii P08]
gi|328908278|gb|EGG28037.1| DEAD/DEAH box helicase [Propionibacterium humerusii P08]
Length = 580
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 215 LRPYQKIAAQSFWDGG---SGVVVLPCGAGKTIVGATAMSLARCTTLILVTNTV 265
>gi|422441473|ref|ZP_16518282.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA3]
gi|422472803|ref|ZP_16549284.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA2]
gi|422573218|ref|ZP_16648783.1| DEAD/DEAH box helicase [Propionibacterium acnes HL044PA1]
gi|313835461|gb|EFS73175.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA2]
gi|314928522|gb|EFS92353.1| DEAD/DEAH box helicase [Propionibacterium acnes HL044PA1]
gi|314970456|gb|EFT14554.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA3]
Length = 549
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKIAAQSFWDGG---SGVVVLPCGAGKTIVGATAMSLARCTTLILVTNTV 234
>gi|407934845|ref|YP_006850487.1| DEAD/DEAH box helicase [Propionibacterium acnes C1]
gi|407903426|gb|AFU40256.1| DEAD/DEAH box helicase [Propionibacterium acnes C1]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|335052816|ref|ZP_08545684.1| type III restriction enzyme, res subunit [Propionibacterium sp.
409-HC1]
gi|333762212|gb|EGL39718.1| type III restriction enzyme, res subunit [Propionibacterium sp.
409-HC1]
Length = 430
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 185 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 235
>gi|408679846|ref|YP_006879673.1| putative ATP-dependent DNA helicase [Streptomyces venezuelae ATCC
10712]
gi|328884175|emb|CCA57414.1| putative ATP-dependent DNA helicase [Streptomyces venezuelae ATCC
10712]
Length = 546
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 172 IDLAEDGWALRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAQAKATTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|422435129|ref|ZP_16511987.1| DEAD/DEAH box helicase [Propionibacterium acnes HL083PA2]
gi|327455607|gb|EGF02262.1| DEAD/DEAH box helicase [Propionibacterium acnes HL083PA2]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|422559000|ref|ZP_16634728.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA1]
gi|314985619|gb|EFT29711.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA1]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|422428926|ref|ZP_16505831.1| DEAD/DEAH box helicase [Propionibacterium acnes HL072PA2]
gi|314980563|gb|EFT24657.1| DEAD/DEAH box helicase [Propionibacterium acnes HL072PA2]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|422389943|ref|ZP_16470040.1| DNA repair helicase RAD25 [Propionibacterium acnes HL103PA1]
gi|422463969|ref|ZP_16540582.1| DEAD/DEAH box helicase [Propionibacterium acnes HL060PA1]
gi|422566280|ref|ZP_16641919.1| DEAD/DEAH box helicase [Propionibacterium acnes HL082PA2]
gi|314965180|gb|EFT09279.1| DEAD/DEAH box helicase [Propionibacterium acnes HL082PA2]
gi|315093939|gb|EFT65915.1| DEAD/DEAH box helicase [Propionibacterium acnes HL060PA1]
gi|327329470|gb|EGE71230.1| DNA repair helicase RAD25 [Propionibacterium acnes HL103PA1]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|422577080|ref|ZP_16652617.1| DEAD/DEAH box helicase [Propionibacterium acnes HL001PA1]
gi|314922095|gb|EFS85926.1| DEAD/DEAH box helicase [Propionibacterium acnes HL001PA1]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|422473913|ref|ZP_16550383.1| DEAD/DEAH box helicase [Propionibacterium acnes HL056PA1]
gi|313834526|gb|EFS72240.1| DEAD/DEAH box helicase [Propionibacterium acnes HL056PA1]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|354606435|ref|ZP_09024406.1| hypothetical protein HMPREF1003_00973 [Propionibacterium sp.
5_U_42AFAA]
gi|422384461|ref|ZP_16464602.1| putative ATP-dependent DNA helicase [Propionibacterium acnes
HL096PA3]
gi|422447472|ref|ZP_16524204.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA3]
gi|422479701|ref|ZP_16556111.1| DEAD/DEAH box helicase [Propionibacterium acnes HL063PA1]
gi|422481533|ref|ZP_16557932.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA1]
gi|422487604|ref|ZP_16563935.1| DEAD/DEAH box helicase [Propionibacterium acnes HL013PA2]
gi|422489052|ref|ZP_16565379.1| DEAD/DEAH box helicase [Propionibacterium acnes HL020PA1]
gi|422498015|ref|ZP_16574288.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA3]
gi|422504240|ref|ZP_16580477.1| DEAD/DEAH box helicase [Propionibacterium acnes HL027PA2]
gi|422504942|ref|ZP_16581176.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA2]
gi|422509427|ref|ZP_16585585.1| DEAD/DEAH box helicase [Propionibacterium acnes HL046PA2]
gi|422514403|ref|ZP_16590524.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA2]
gi|422535349|ref|ZP_16611272.1| DEAD/DEAH box helicase [Propionibacterium acnes HL072PA1]
gi|422553142|ref|ZP_16628929.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA3]
gi|422554616|ref|ZP_16630386.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA2]
gi|422567764|ref|ZP_16643390.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA2]
gi|313806616|gb|EFS45123.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA2]
gi|313817160|gb|EFS54874.1| DEAD/DEAH box helicase [Propionibacterium acnes HL046PA2]
gi|313821776|gb|EFS59490.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA1]
gi|313824332|gb|EFS62046.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA2]
gi|313826692|gb|EFS64406.1| DEAD/DEAH box helicase [Propionibacterium acnes HL063PA1]
gi|314926883|gb|EFS90714.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA3]
gi|314961211|gb|EFT05312.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA2]
gi|314987445|gb|EFT31536.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA2]
gi|314988958|gb|EFT33049.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA3]
gi|315082589|gb|EFT54565.1| DEAD/DEAH box helicase [Propionibacterium acnes HL027PA2]
gi|315086301|gb|EFT58277.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA3]
gi|315087551|gb|EFT59527.1| DEAD/DEAH box helicase [Propionibacterium acnes HL072PA1]
gi|327333533|gb|EGE75253.1| putative ATP-dependent DNA helicase [Propionibacterium acnes
HL096PA3]
gi|327445441|gb|EGE92095.1| DEAD/DEAH box helicase [Propionibacterium acnes HL013PA2]
gi|328758685|gb|EGF72301.1| DEAD/DEAH box helicase [Propionibacterium acnes HL020PA1]
gi|353557842|gb|EHC27210.1| hypothetical protein HMPREF1003_00973 [Propionibacterium sp.
5_U_42AFAA]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|365962182|ref|YP_004943748.1| DEAD/DEAH box helicase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365964426|ref|YP_004945991.1| DEAD/DEAH box helicase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365973362|ref|YP_004954921.1| DEAD/DEAH box helicase [Propionibacterium acnes TypeIA2 P.acn33]
gi|387502843|ref|YP_005944072.1| DEAD/DEAH box helicase [Propionibacterium acnes 6609]
gi|419420681|ref|ZP_13960910.1| DEAD/DEAH box helicase [Propionibacterium acnes PRP-38]
gi|422387315|ref|ZP_16467432.1| putative ATP-dependent DNA helicase [Propionibacterium acnes
HL096PA2]
gi|422392114|ref|ZP_16472188.1| putative ATP-dependent DNA helicase [Propionibacterium acnes
HL099PA1]
gi|422395160|ref|ZP_16475201.1| putative ATP-dependent DNA helicase [Propionibacterium acnes
HL097PA1]
gi|422424884|ref|ZP_16501830.1| DEAD/DEAH box helicase [Propionibacterium acnes HL043PA1]
gi|422427243|ref|ZP_16504161.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA1]
gi|422431858|ref|ZP_16508728.1| DEAD/DEAH box helicase [Propionibacterium acnes HL059PA2]
gi|422436622|ref|ZP_16513469.1| DEAD/DEAH box helicase [Propionibacterium acnes HL092PA1]
gi|422442842|ref|ZP_16519645.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA1]
gi|422446641|ref|ZP_16523386.1| DEAD/DEAH box helicase [Propionibacterium acnes HL027PA1]
gi|422450009|ref|ZP_16526726.1| DEAD/DEAH box helicase [Propionibacterium acnes HL030PA2]
gi|422453274|ref|ZP_16529970.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA3]
gi|422456418|ref|ZP_16533082.1| DEAD/DEAH box helicase [Propionibacterium acnes HL030PA1]
gi|422460415|ref|ZP_16537049.1| DEAD/DEAH box helicase [Propionibacterium acnes HL038PA1]
gi|422476788|ref|ZP_16553227.1| DEAD/DEAH box helicase [Propionibacterium acnes HL007PA1]
gi|422484213|ref|ZP_16560592.1| DEAD/DEAH box helicase [Propionibacterium acnes HL043PA2]
gi|422491773|ref|ZP_16568084.1| DEAD/DEAH box helicase [Propionibacterium acnes HL086PA1]
gi|422494156|ref|ZP_16570451.1| DEAD/DEAH box helicase [Propionibacterium acnes HL025PA1]
gi|422500454|ref|ZP_16576710.1| DEAD/DEAH box helicase [Propionibacterium acnes HL063PA2]
gi|422511566|ref|ZP_16587709.1| DEAD/DEAH box helicase [Propionibacterium acnes HL059PA1]
gi|422515627|ref|ZP_16591739.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA2]
gi|422518196|ref|ZP_16594268.1| DEAD/DEAH box helicase [Propionibacterium acnes HL074PA1]
gi|422520842|ref|ZP_16596884.1| DEAD/DEAH box helicase [Propionibacterium acnes HL045PA1]
gi|422523774|ref|ZP_16599786.1| DEAD/DEAH box helicase [Propionibacterium acnes HL053PA2]
gi|422526334|ref|ZP_16602333.1| DEAD/DEAH box helicase [Propionibacterium acnes HL083PA1]
gi|422528355|ref|ZP_16604337.1| DEAD/DEAH box helicase [Propionibacterium acnes HL053PA1]
gi|422531280|ref|ZP_16607228.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA1]
gi|422535815|ref|ZP_16611723.1| DEAD/DEAH box helicase [Propionibacterium acnes HL078PA1]
gi|422538301|ref|ZP_16614175.1| DEAD/DEAH box helicase [Propionibacterium acnes HL013PA1]
gi|422541084|ref|ZP_16616942.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA1]
gi|422543632|ref|ZP_16619472.1| DEAD/DEAH box helicase [Propionibacterium acnes HL082PA1]
gi|422546547|ref|ZP_16622374.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA3]
gi|422550974|ref|ZP_16626771.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA1]
gi|422557739|ref|ZP_16633482.1| DEAD/DEAH box helicase [Propionibacterium acnes HL025PA2]
gi|422562547|ref|ZP_16638225.1| DEAD/DEAH box helicase [Propionibacterium acnes HL046PA1]
gi|422570476|ref|ZP_16646071.1| DEAD/DEAH box helicase [Propionibacterium acnes HL067PA1]
gi|422578287|ref|ZP_16653816.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA4]
gi|313765421|gb|EFS36785.1| DEAD/DEAH box helicase [Propionibacterium acnes HL013PA1]
gi|313772592|gb|EFS38558.1| DEAD/DEAH box helicase [Propionibacterium acnes HL074PA1]
gi|313792945|gb|EFS41012.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA1]
gi|313802605|gb|EFS43827.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA2]
gi|313810814|gb|EFS48528.1| DEAD/DEAH box helicase [Propionibacterium acnes HL083PA1]
gi|313814341|gb|EFS52055.1| DEAD/DEAH box helicase [Propionibacterium acnes HL025PA1]
gi|313815175|gb|EFS52889.1| DEAD/DEAH box helicase [Propionibacterium acnes HL059PA1]
gi|313828480|gb|EFS66194.1| DEAD/DEAH box helicase [Propionibacterium acnes HL063PA2]
gi|313831933|gb|EFS69647.1| DEAD/DEAH box helicase [Propionibacterium acnes HL007PA1]
gi|313840243|gb|EFS77957.1| DEAD/DEAH box helicase [Propionibacterium acnes HL086PA1]
gi|314915936|gb|EFS79767.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA4]
gi|314916965|gb|EFS80796.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA1]
gi|314921485|gb|EFS85316.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA3]
gi|314931191|gb|EFS95022.1| DEAD/DEAH box helicase [Propionibacterium acnes HL067PA1]
gi|314954750|gb|EFS99156.1| DEAD/DEAH box helicase [Propionibacterium acnes HL027PA1]
gi|314958917|gb|EFT03019.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA1]
gi|314964361|gb|EFT08461.1| DEAD/DEAH box helicase [Propionibacterium acnes HL082PA1]
gi|314969460|gb|EFT13558.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA1]
gi|314974527|gb|EFT18622.1| DEAD/DEAH box helicase [Propionibacterium acnes HL053PA1]
gi|314977279|gb|EFT21374.1| DEAD/DEAH box helicase [Propionibacterium acnes HL045PA1]
gi|315078624|gb|EFT50655.1| DEAD/DEAH box helicase [Propionibacterium acnes HL053PA2]
gi|315081915|gb|EFT53891.1| DEAD/DEAH box helicase [Propionibacterium acnes HL078PA1]
gi|315097598|gb|EFT69574.1| DEAD/DEAH box helicase [Propionibacterium acnes HL038PA1]
gi|315099814|gb|EFT71790.1| DEAD/DEAH box helicase [Propionibacterium acnes HL059PA2]
gi|315101878|gb|EFT73854.1| DEAD/DEAH box helicase [Propionibacterium acnes HL046PA1]
gi|315106614|gb|EFT78590.1| DEAD/DEAH box helicase [Propionibacterium acnes HL030PA1]
gi|315110404|gb|EFT82380.1| DEAD/DEAH box helicase [Propionibacterium acnes HL030PA2]
gi|327331551|gb|EGE73290.1| putative ATP-dependent DNA helicase [Propionibacterium acnes
HL096PA2]
gi|327335058|gb|EGE76769.1| putative ATP-dependent DNA helicase [Propionibacterium acnes
HL097PA1]
gi|327447055|gb|EGE93709.1| DEAD/DEAH box helicase [Propionibacterium acnes HL043PA1]
gi|327449909|gb|EGE96563.1| DEAD/DEAH box helicase [Propionibacterium acnes HL043PA2]
gi|327454752|gb|EGF01407.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA3]
gi|327456900|gb|EGF03555.1| DEAD/DEAH box helicase [Propionibacterium acnes HL092PA1]
gi|328755809|gb|EGF69425.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA1]
gi|328756588|gb|EGF70204.1| DEAD/DEAH box helicase [Propionibacterium acnes HL025PA2]
gi|328761680|gb|EGF75195.1| putative ATP-dependent DNA helicase [Propionibacterium acnes
HL099PA1]
gi|335276888|gb|AEH28793.1| DEAD/DEAH box helicase [Propionibacterium acnes 6609]
gi|365738863|gb|AEW83065.1| DEAD/DEAH box helicase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365741107|gb|AEW80801.1| DEAD/DEAH box helicase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365743361|gb|AEW78558.1| DEAD/DEAH box helicase [Propionibacterium acnes TypeIA2 P.acn33]
gi|379979055|gb|EIA12379.1| DEAD/DEAH box helicase [Propionibacterium acnes PRP-38]
gi|456740051|gb|EMF64582.1| DEAD/DEAH box helicase [Propionibacterium acnes FZ1/2/0]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|295130034|ref|YP_003580697.1| DEAD/DEAH box helicase [Propionibacterium acnes SK137]
gi|342211342|ref|ZP_08704067.1| type III restriction enzyme, res subunit [Propionibacterium sp.
CC003-HC2]
gi|291376058|gb|ADD99912.1| DEAD/DEAH box helicase [Propionibacterium acnes SK137]
gi|340766886|gb|EGR89411.1| type III restriction enzyme, res subunit [Propionibacterium sp.
CC003-HC2]
Length = 553
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 185 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 235
>gi|289428471|ref|ZP_06430157.1| DEAD/DEAH box helicase [Propionibacterium acnes J165]
gi|386023418|ref|YP_005941721.1| DNA helicase [Propionibacterium acnes 266]
gi|289158443|gb|EFD06660.1| DEAD/DEAH box helicase [Propionibacterium acnes J165]
gi|332674874|gb|AEE71690.1| DNA helicase [Propionibacterium acnes 266]
Length = 553
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 185 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 235
>gi|282853546|ref|ZP_06262883.1| DEAD/DEAH box helicase [Propionibacterium acnes J139]
gi|386071008|ref|YP_005985904.1| DEAD/DEAH box helicase [Propionibacterium acnes ATCC 11828]
gi|422458408|ref|ZP_16535062.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA2]
gi|422465393|ref|ZP_16541996.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA4]
gi|422468857|ref|ZP_16545388.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA3]
gi|282582999|gb|EFB88379.1| DEAD/DEAH box helicase [Propionibacterium acnes J139]
gi|314982316|gb|EFT26409.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA3]
gi|315092642|gb|EFT64618.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA4]
gi|315104630|gb|EFT76606.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA2]
gi|353455374|gb|AER05893.1| DEAD/DEAH box helicase [Propionibacterium acnes ATCC 11828]
Length = 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|428303982|ref|YP_007140807.1| type III restriction protein res subunit [Crinalium epipsammum PCC
9333]
gi|428304297|ref|YP_007141122.1| type III restriction protein res subunit [Crinalium epipsammum PCC
9333]
gi|428245517|gb|AFZ11297.1| type III restriction protein res subunit [Crinalium epipsammum PCC
9333]
gi|428245832|gb|AFZ11612.1| type III restriction protein res subunit [Crinalium epipsammum PCC
9333]
Length = 556
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ++++ + GR SG IVLPCG+GK++VG+ A V+ LVL +S
Sbjct: 189 LRDYQKEAVEVFYQAGRVHGGSGTIVLPCGSGKTMVGLAAIAAVQSNTLVLTSS 242
>gi|294629996|ref|ZP_06708556.1| ATP-dependent DNA helicase [Streptomyces sp. e14]
gi|292833329|gb|EFF91678.1| ATP-dependent DNA helicase [Streptomyces sp. e14]
Length = 548
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL+ LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L
Sbjct: 172 IDLREDGWKLRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKSTTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|119961251|ref|YP_946800.1| ATP-dependent DNA helicase [Arthrobacter aurescens TC1]
gi|403526036|ref|YP_006660923.1| DNA repair helicase RAD25 [Arthrobacter sp. Rue61a]
gi|119948110|gb|ABM07021.1| putative ATP-dependent DNA helicase [Arthrobacter aurescens TC1]
gi|403228463|gb|AFR27885.1| putative DNA repair helicase RAD25 [Arthrobacter sp. Rue61a]
Length = 552
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + G SGV+VLPCGAGK+LVG A T L+L + V
Sbjct: 182 LRPYQKLATENFWAGG---SGVVVLPCGAGKTLVGAAAMATSSTTTLILVTNTV 232
>gi|116669352|ref|YP_830285.1| helicase domain-containing protein [Arthrobacter sp. FB24]
gi|116609461|gb|ABK02185.1| helicase domain protein [Arthrobacter sp. FB24]
Length = 551
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + G SGV+VLPCGAGK+LVG A T L+L + V
Sbjct: 182 LRPYQKLATENFWAGG---SGVVVLPCGAGKTLVGAAAMATSSTTTLILVTNTV 232
>gi|302339342|ref|YP_003804548.1| helicase [Spirochaeta smaragdinae DSM 11293]
gi|301636527|gb|ADK81954.1| helicase domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 557
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
S V+R YQ+++ R ++G+G+A SG IVLPCG+GK++VG+ ++ L+L
Sbjct: 187 SFVVRDYQKEAARALYGDGKAGSGFGTIVLPCGSGKTIVGMEVMRLMQTNTLIL 240
>gi|289424569|ref|ZP_06426352.1| DEAD/DEAH box helicase [Propionibacterium acnes SK187]
gi|335053521|ref|ZP_08546358.1| helicase C-terminal domain protein [Propionibacterium sp. 434-HC2]
gi|417930924|ref|ZP_12574297.1| type III restriction enzyme, res subunit [Propionibacterium acnes
SK182]
gi|289155266|gb|EFD03948.1| DEAD/DEAH box helicase [Propionibacterium acnes SK187]
gi|333766924|gb|EGL44201.1| helicase C-terminal domain protein [Propionibacterium sp. 434-HC2]
gi|340769247|gb|EGR91771.1| type III restriction enzyme, res subunit [Propionibacterium acnes
SK182]
Length = 694
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 326 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 376
>gi|365863777|ref|ZP_09403481.1| putative ATP-dependent DNA helicase [Streptomyces sp. W007]
gi|364006749|gb|EHM27785.1| putative ATP-dependent DNA helicase [Streptomyces sp. W007]
Length = 547
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTV 231
>gi|50841956|ref|YP_055183.1| superfamily II DNA/RNA helicase [Propionibacterium acnes KPA171202]
gi|50839558|gb|AAT82225.1| DNA or RNA helicase of superfamily II [Propionibacterium acnes
KPA171202]
Length = 694
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 326 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 376
>gi|411007738|ref|ZP_11384067.1| ATP-dependent DNA helicase [Streptomyces globisporus C-1027]
Length = 547
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 231
>gi|421739802|ref|ZP_16178094.1| DNA/RNA helicase, superfamily II, partial [Streptomyces sp. SM8]
gi|406691812|gb|EKC95541.1| DNA/RNA helicase, superfamily II, partial [Streptomyces sp. SM8]
Length = 563
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 198 LRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 248
>gi|359150058|ref|ZP_09182930.1| ATP-dependent DNA helicase [Streptomyces sp. S4]
Length = 540
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 175 LRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 225
>gi|326777593|ref|ZP_08236858.1| helicase domain protein [Streptomyces griseus XylebKG-1]
gi|326657926|gb|EGE42772.1| helicase domain protein [Streptomyces griseus XylebKG-1]
Length = 547
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 231
>gi|291453278|ref|ZP_06592668.1| ATP-dependent DNA helicase [Streptomyces albus J1074]
gi|291356227|gb|EFE83129.1| ATP-dependent DNA helicase [Streptomyces albus J1074]
Length = 545
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 180 LRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 230
>gi|345001279|ref|YP_004804133.1| helicase domain-containing protein [Streptomyces sp. SirexAA-E]
gi|344316905|gb|AEN11593.1| helicase domain protein [Streptomyces sp. SirexAA-E]
Length = 551
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 231
>gi|239989681|ref|ZP_04710345.1| putative ATP-dependent DNA helicase [Streptomyces roseosporus NRRL
11379]
gi|291446696|ref|ZP_06586086.1| ATP-dependent DNA helicase [Streptomyces roseosporus NRRL 15998]
gi|291349643|gb|EFE76547.1| ATP-dependent DNA helicase [Streptomyces roseosporus NRRL 15998]
Length = 547
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 231
>gi|403746349|ref|ZP_10954882.1| type III restriction protein res subunit [Alicyclobacillus
hesperidum URH17-3-68]
gi|403120680|gb|EJY55034.1| type III restriction protein res subunit [Alicyclobacillus
hesperidum URH17-3-68]
Length = 486
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+ IDL+ LR YQ ++ + F NG A GVIVLPCGAGK++VG ++R L+L
Sbjct: 112 LAIDLRQEKALRAYQYNAV-QAFLNGPAH-GVIVLPCGAGKTVVGTAILASLRMPTLIL 168
>gi|333026244|ref|ZP_08454308.1| putative ATP-dependent DNA helicase [Streptomyces sp. Tu6071]
gi|332746096|gb|EGJ76537.1| putative ATP-dependent DNA helicase [Streptomyces sp. Tu6071]
Length = 546
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 180 LRPYQKQAVDNFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 230
>gi|295838136|ref|ZP_06825069.1| ATP-dependent DNA helicase [Streptomyces sp. SPB74]
gi|295826881|gb|EFG65124.1| ATP-dependent DNA helicase [Streptomyces sp. SPB74]
Length = 546
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 180 LRPYQKQAVDNFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 230
>gi|302520011|ref|ZP_07272353.1| ATP-dependent DNA helicase [Streptomyces sp. SPB78]
gi|302428906|gb|EFL00722.1| ATP-dependent DNA helicase [Streptomyces sp. SPB78]
Length = 546
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 180 LRPYQKQAVDNFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 230
>gi|365826774|ref|ZP_09368669.1| hypothetical protein HMPREF0975_00452 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365265743|gb|EHM95485.1| hypothetical protein HMPREF0975_00452 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 651
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 1 MTIDLKPSAV-LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+T+ PS LRPYQ +++ + G SGV+VLPCGAGK+LVG + L+L
Sbjct: 278 ITLTDSPSTFQLRPYQSEAVESFWAGG---SGVVVLPCGAGKTLVGAASMARSSTTTLIL 334
Query: 60 CNSGV 64
+ V
Sbjct: 335 VTNAV 339
>gi|359778201|ref|ZP_09281472.1| putative ATP-dependent DNA helicase [Arthrobacter globiformis NBRC
12137]
gi|359304664|dbj|GAB15301.1| putative ATP-dependent DNA helicase [Arthrobacter globiformis NBRC
12137]
Length = 547
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ + + G SGV+VLPCGAGK+LVG A T L+L + V
Sbjct: 182 LRPYQRLATENFWAGG---SGVVVLPCGAGKTLVGAAAMATSSTTTLILVTNTV 232
>gi|440704816|ref|ZP_20885643.1| DEAD/DEAH box helicase [Streptomyces turgidiscabies Car8]
gi|440273502|gb|ELP62235.1| DEAD/DEAH box helicase [Streptomyces turgidiscabies Car8]
Length = 554
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 185 LRPYQQQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAEAKATTLILVTNTV 235
>gi|350569020|ref|ZP_08937418.1| DNA or RNA helicase of superfamily II [Propionibacterium avidum
ATCC 25577]
gi|348661263|gb|EGY77959.1| DNA or RNA helicase of superfamily II [Propionibacterium avidum
ATCC 25577]
Length = 552
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ + + G SGV+VLPCGAGK++VG TA R L+L + V
Sbjct: 184 LRPYQRMAAESFWDGG---SGVVVLPCGAGKTVVGATAMSLARCTTLILVTNTV 234
>gi|386840890|ref|YP_006245948.1| ATP-dependent DNA helicase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101191|gb|AEY90075.1| ATP-dependent DNA helicase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794184|gb|AGF64233.1| ATP-dependent DNA helicase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 550
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
L+ LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 178 LEDGWTLRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTV 234
>gi|300870216|ref|YP_003785087.1| putative DNA repair helicase [Brachyspira pilosicoli 95/1000]
gi|404475446|ref|YP_006706877.1| DNA repair helicase [Brachyspira pilosicoli B2904]
gi|431806738|ref|YP_007233636.1| DNA repair helicase [Brachyspira pilosicoli P43/6/78]
gi|434382657|ref|YP_006704440.1| putative DNA repair helicase [Brachyspira pilosicoli WesB]
gi|300687915|gb|ADK30586.1| putative DNA repair helicase [Brachyspira pilosicoli 95/1000]
gi|404431306|emb|CCG57352.1| putative DNA repair helicase [Brachyspira pilosicoli WesB]
gi|404436935|gb|AFR70129.1| putative DNA repair helicase [Brachyspira pilosicoli B2904]
gi|430780097|gb|AGA65381.1| putative DNA repair helicase [Brachyspira pilosicoli P43/6/78]
Length = 565
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVVFC 67
LR YQ ++ + NGR +GVI LPCG GK++VG+ A ++ + L++ +GV C
Sbjct: 189 LREYQLNAIEAFYANGRPEGGAGVIALPCGTGKTVVGIAAMSKMQTKTLIIV-TGVTAC 246
>gi|353442071|gb|AER00321.1| xeroderma pigmentosum group B, partial [Hydra vulgaris]
Length = 227
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/27 (81%), Positives = 24/27 (88%)
Query: 38 GAGKSLVGVTACCTVRKRALVLCNSGV 64
GAGK+LVGVTA CTVRK+ LVLC SGV
Sbjct: 1 GAGKTLVGVTAACTVRKKCLVLCTSGV 27
>gi|254414041|ref|ZP_05027809.1| Type III restriction enzyme, res subunit family [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179177|gb|EDX74173.1| Type III restriction enzyme, res subunit family [Coleofasciculus
chthonoplastes PCC 7420]
Length = 604
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+RPYQ+++ + +G + SG+I LPCGAGK++VG+ A V + L+L S
Sbjct: 191 VRPYQQQAAEAFYQSGYVQGGSGIICLPCGAGKTIVGMAAMAAVGEHTLILTTS 244
>gi|443626543|ref|ZP_21110961.1| putative ATP-dependent DNA helicase [Streptomyces viridochromogenes
Tue57]
gi|443339950|gb|ELS54174.1| putative ATP-dependent DNA helicase [Streptomyces viridochromogenes
Tue57]
Length = 548
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTV 231
>gi|429193886|ref|ZP_19186022.1| DEAD/DEAH box helicase [Streptomyces ipomoeae 91-03]
gi|428670413|gb|EKX69300.1| DEAD/DEAH box helicase [Streptomyces ipomoeae 91-03]
Length = 547
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTV 231
>gi|408531108|emb|CCK29282.1| ATP-dependent DNA helicase [Streptomyces davawensis JCM 4913]
Length = 547
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTV 231
>gi|383639665|ref|ZP_09952071.1| ATP-dependent DNA helicase [Streptomyces chartreusis NRRL 12338]
Length = 547
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTV 231
>gi|302560004|ref|ZP_07312346.1| ATP-dependent DNA helicase [Streptomyces griseoflavus Tu4000]
gi|302477622|gb|EFL40715.1| ATP-dependent DNA helicase [Streptomyces griseoflavus Tu4000]
Length = 547
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTV 231
>gi|323359212|ref|YP_004225608.1| DNA or RNA helicase of superfamily II [Microbacterium testaceum
StLB037]
gi|323275583|dbj|BAJ75728.1| DNA or RNA helicase of superfamily II [Microbacterium testaceum
StLB037]
Length = 549
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ G SGV+VLPCGAGK+LVG A R L+L + V
Sbjct: 182 LRPYQRQAVDSFSEGG---SGVVVLPCGAGKTLVGAGAMAETRTTTLILVTNTV 232
>gi|229819343|ref|YP_002880869.1| type III restriction protein res subunit [Beutenbergia cavernae DSM
12333]
gi|229565256|gb|ACQ79107.1| type III restriction protein res subunit [Beutenbergia cavernae DSM
12333]
Length = 548
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRPYQSEAVESFWHGG---SGVVVLPCGAGKTLVGAAAMAQSQTTTLILVTNTV 232
>gi|254393413|ref|ZP_05008555.1| ATP-dependent DNA helicase [Streptomyces clavuligerus ATCC 27064]
gi|294814127|ref|ZP_06772770.1| ATP-dependent DNA helicase [Streptomyces clavuligerus ATCC 27064]
gi|326442528|ref|ZP_08217262.1| putative ATP-dependent DNA helicase [Streptomyces clavuligerus ATCC
27064]
gi|197707042|gb|EDY52854.1| ATP-dependent DNA helicase [Streptomyces clavuligerus ATCC 27064]
gi|294326726|gb|EFG08369.1| ATP-dependent DNA helicase [Streptomyces clavuligerus ATCC 27064]
Length = 545
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQRQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 231
>gi|357391321|ref|YP_004906162.1| putative ATP-dependent DNA helicase [Kitasatospora setae KM-6054]
gi|311897798|dbj|BAJ30206.1| putative ATP-dependent DNA helicase [Kitasatospora setae KM-6054]
Length = 543
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL+ LRPYQ ++ + G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 172 IDLREDGWQLRPYQRHAVDGFWHGG---SGVVVLPCGAGKTLVGAAAMAEAKSTTLILVT 228
Query: 62 SGV 64
+ V
Sbjct: 229 NTV 231
>gi|332669171|ref|YP_004452179.1| helicase domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338209|gb|AEE44792.1| helicase domain protein [Cellulomonas fimi ATCC 484]
Length = 548
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQE ++ + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRPYQEHAVESFWHGG---SGVVVLPCGAGKTLVGAGAMARSSTTTLILVTNTV 232
>gi|50955355|ref|YP_062643.1| DNA repair helicase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50951837|gb|AAT89538.1| DNA repair helicase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 546
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ K++ F G SGV+VLPCGAGK+LV A T + L+L + V
Sbjct: 182 LRDYQRKAIGNFFDGG---SGVVVLPCGAGKTLVSAGAMATAKTTTLILVTNTV 232
>gi|380301717|ref|ZP_09851410.1| DNA/RNA helicase, superfamily II [Brachybacterium squillarum M-6-3]
Length = 554
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ G SGV+VLPCGAGK+LVG A + + L+L S V
Sbjct: 182 LRPYQQEAVDGFRHGG---SGVVVLPCGAGKTLVGAGAMAAMGRTTLILVTSTV 232
>gi|456385575|gb|EMF51143.1| DNA helicase [Streptomyces bottropensis ATCC 25435]
Length = 547
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKATTLILVTNTV 231
>gi|29830455|ref|NP_825089.1| ATP-dependent DNA helicase [Streptomyces avermitilis MA-4680]
gi|29607567|dbj|BAC71624.1| putative ATP-dependent DNA helicase [Streptomyces avermitilis
MA-4680]
Length = 547
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKATTLILVTNTV 231
>gi|402815941|ref|ZP_10865533.1| putative ATP-dependent helicase [Paenibacillus alvei DSM 29]
gi|402506981|gb|EJW17504.1| putative ATP-dependent helicase [Paenibacillus alvei DSM 29]
Length = 568
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
+R YQ ++++ G+ + A GVIVLPCGAGK++VG+TA ++ L+L ++
Sbjct: 186 VRDYQREAVQAFIGSAKRAAGDGVIVLPCGAGKTIVGITAMTELQSETLILTSN 239
>gi|343524024|ref|ZP_08760984.1| type III restriction enzyme, res subunit [Actinomyces sp. oral
taxon 175 str. F0384]
gi|343399005|gb|EGV11530.1| type III restriction enzyme, res subunit [Actinomyces sp. oral
taxon 175 str. F0384]
Length = 564
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG + L+L + V
Sbjct: 198 LRPYQSEAVESFWAGG---SGVVVLPCGAGKTLVGAASMAKSSTTTLILVTNAV 248
>gi|357411964|ref|YP_004923700.1| helicase domain-containing protein [Streptomyces flavogriseus ATCC
33331]
gi|320009333|gb|ADW04183.1| helicase domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 547
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVDGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 231
>gi|182436979|ref|YP_001824698.1| ATP-dependent DNA helicase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178465495|dbj|BAG20015.1| putative ATP-dependent DNA helicase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 547
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQKQAVDGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 231
>gi|325962248|ref|YP_004240154.1| DNA/RNA helicase [Arthrobacter phenanthrenivorans Sphe3]
gi|323468335|gb|ADX72020.1| DNA/RNA helicase, superfamily II [Arthrobacter phenanthrenivorans
Sphe3]
Length = 548
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + G SGV+VLPCGAGK+LVG A T L+L + V
Sbjct: 182 LRPYQQMASDNFWAGG---SGVVVLPCGAGKTLVGAAAMATGSTTTLILVTNTV 232
>gi|291438904|ref|ZP_06578294.1| ATP-dependent DNA helicase [Streptomyces ghanaensis ATCC 14672]
gi|291341799|gb|EFE68755.1| ATP-dependent DNA helicase [Streptomyces ghanaensis ATCC 14672]
Length = 547
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 181 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAQSTTLILVTNTV 231
>gi|296127753|ref|YP_003635005.1| helicase domain-containing protein [Brachyspira murdochii DSM
12563]
gi|296019569|gb|ADG72806.1| helicase domain protein [Brachyspira murdochii DSM 12563]
Length = 564
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVVFC 67
LR YQ+ S+ + +G+ +GVI LPCG GK++VG+ A + R L++ +GV C
Sbjct: 188 LRDYQKNSVEAFYADGKPEGGAGVIALPCGTGKTVVGIAAMYKTQTRTLIIV-TGVTAC 245
>gi|329946580|ref|ZP_08294045.1| helicase protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328527084|gb|EGF54093.1| helicase protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 560
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG + L+L + V
Sbjct: 198 LRPYQSEAVESFWAGG---SGVVVLPCGAGKTLVGAASMARSSTTTLILVTNAV 248
>gi|325066723|ref|ZP_08125396.1| type III restriction protein res subunit [Actinomyces oris K20]
Length = 564
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG + L+L + V
Sbjct: 198 LRPYQSEAVESFWSGG---SGVVVLPCGAGKTLVGAASMAKSSTTTLILVTNAV 248
>gi|429220366|ref|YP_007182010.1| DNA/RNA helicase [Deinococcus peraridilitoris DSM 19664]
gi|429131229|gb|AFZ68244.1| DNA/RNA helicase, superfamily II [Deinococcus peraridilitoris DSM
19664]
Length = 568
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNG--RARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
I L + +R YQE++ R + +G + SGV+VLP GAGK++VG+ A V +R LVL
Sbjct: 178 IGLSQALAVRDYQEEAARAFYQSGSRQGGSGVVVLPPGAGKTVVGMVAMSLVGQRTLVL 236
>gi|420154767|ref|ZP_14661647.1| type III restriction enzyme, res subunit [Actinomyces massiliensis
F0489]
gi|394751515|gb|EJF35267.1| type III restriction enzyme, res subunit [Actinomyces massiliensis
F0489]
Length = 559
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG + L+L + V
Sbjct: 197 LRPYQNEAVESFWAGG---SGVVVLPCGAGKTLVGAASMARSSTTTLILVTNAV 247
>gi|453052341|gb|EME99825.1| ATP-dependent DNA helicase [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 549
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQRQAVDGFWHGG---SGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTV 231
>gi|256833263|ref|YP_003161990.1| helicase domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256686794|gb|ACV09687.1| helicase domain protein [Jonesia denitrificans DSM 20603]
Length = 558
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 188 LRPYQQHATDAFTSGG---SGVVVLPCGAGKTLVGAAAMANISTTTLILVTNTV 238
>gi|410865494|ref|YP_006980105.1| DNA or RNA helicase of superfamily II [Propionibacterium
acidipropionici ATCC 4875]
gi|410822135|gb|AFV88750.1| DNA or RNA helicase of superfamily II [Propionibacterium
acidipropionici ATCC 4875]
Length = 551
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ + + G SGV+VLPCGAGK+LVG TA + L+L + V
Sbjct: 184 LRPYQRVAAESFWDGG---SGVVVLPCGAGKTLVGATAMSLAQCTTLILVTNTV 234
>gi|340359059|ref|ZP_08681557.1| ATP-dependent DNA helicase [Actinomyces sp. oral taxon 448 str.
F0400]
gi|339885345|gb|EGQ75073.1| ATP-dependent DNA helicase [Actinomyces sp. oral taxon 448 str.
F0400]
Length = 559
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG LVL + V
Sbjct: 197 LRPYQTQAVEAFWAGG---SGVVVLPCGAGKTLVGAAVMARSSTTTLVLVTNAV 247
>gi|400975239|ref|ZP_10802470.1| DNA repair helicase [Salinibacterium sp. PAMC 21357]
Length = 548
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ ++ F +G SGV+VLPCGAGK+LVG+ A + L+L + V
Sbjct: 185 LREYQQHAIDNFFHHG---SGVVVLPCGAGKTLVGLGAMAQSKTTTLILVTNTV 235
>gi|88855709|ref|ZP_01130372.1| DNA repair helicase [marine actinobacterium PHSC20C1]
gi|88815033|gb|EAR24892.1| DNA repair helicase [marine actinobacterium PHSC20C1]
Length = 548
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ ++ F +G SGV+VLPCGAGK+LVG+ A + L+L + V
Sbjct: 185 LREYQQHAIDNFFHHG---SGVVVLPCGAGKTLVGLGAMAQSKTTTLILVTNTV 235
>gi|430750411|ref|YP_007213319.1| DNA/RNA helicase [Thermobacillus composti KWC4]
gi|430734376|gb|AGA58321.1| DNA/RNA helicase, superfamily II [Thermobacillus composti KWC4]
Length = 568
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 11 LRPYQEKSL----RKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQE+++ R+ G G SGVIVLPCGAGK++VG+ A +R AL+L S
Sbjct: 188 LRDYQERAVDLFCREEAGAGG--SGVIVLPCGAGKTIVGIAALARLRCEALILTPS 241
>gi|444306441|ref|ZP_21142206.1| helicase [Arthrobacter sp. SJCon]
gi|443481233|gb|ELT44163.1| helicase [Arthrobacter sp. SJCon]
Length = 548
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ + + G SGV+VLPCGAGK+LVG A T L+L + V
Sbjct: 182 LRPYQRLASENFWAGG---SGVVVLPCGAGKTLVGAAAMATGSTTTLILVTNTV 232
>gi|295394515|ref|ZP_06804738.1| DNA or RNA helicase of superfamily II [Brevibacterium mcbrellneri
ATCC 49030]
gi|294972694|gb|EFG48546.1| DNA or RNA helicase of superfamily II [Brevibacterium mcbrellneri
ATCC 49030]
Length = 542
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 2 TIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
TI L S LR YQE+++ + SGV+VLPCGAGK++VG V+ L+L
Sbjct: 171 TIGLTDSWHLRDYQERAVDAFV---QGESGVVVLPCGAGKTVVGAATMSRVQTTTLILVT 227
Query: 62 SGV 64
+ V
Sbjct: 228 NSV 230
>gi|336319557|ref|YP_004599525.1| helicase domain protein [[Cellvibrio] gilvus ATCC 13127]
gi|336103138|gb|AEI10957.1| helicase domain protein [[Cellvibrio] gilvus ATCC 13127]
Length = 546
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+RPYQ++++ F G SGV+VLPCGAGK++VG A L+L + V
Sbjct: 181 MRPYQQQAVDGFFHGG---SGVVVLPCGAGKTIVGAGAMAKSSTTTLILVTNTV 231
>gi|220911680|ref|YP_002486989.1| helicase [Arthrobacter chlorophenolicus A6]
gi|219858558|gb|ACL38900.1| helicase domain protein [Arthrobacter chlorophenolicus A6]
Length = 548
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ + + G SGV+VLPCGAGK+LVG A T L+L + V
Sbjct: 182 LRPYQRLASENFWSGG---SGVVVLPCGAGKTLVGAAAMATGSTTTLILVTNTV 232
>gi|381398295|ref|ZP_09923699.1| type III restriction protein res subunit [Microbacterium
laevaniformans OR221]
gi|380774261|gb|EIC07561.1| type III restriction protein res subunit [Microbacterium
laevaniformans OR221]
Length = 547
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL LRPYQ ++ +F G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 173 IDLHEDGWTLRPYQRHAV-DIFSEGG--SGVVVLPCGAGKTLVGAAAMAETKTTTLILVT 229
Query: 62 SGV 64
+ V
Sbjct: 230 NTV 232
>gi|386774129|ref|ZP_10096507.1| DNA/RNA helicase, superfamily II [Brachybacterium paraconglomeratum
LC44]
Length = 551
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ G SGV+VLPCGAGK+LVG A +++ L+L + V
Sbjct: 182 LRPYQTEAVDGFRHGG---SGVVVLPCGAGKTLVGAGAMAAMQRTTLILVTNTV 232
>gi|226313631|ref|YP_002773525.1| ATP-dependent helicase [Brevibacillus brevis NBRC 100599]
gi|226096579|dbj|BAH45021.1| putative ATP-dependent helicase [Brevibacillus brevis NBRC 100599]
Length = 557
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ++++ + G SGV+VLPCGAGK+++G+ A C ++ L+L
Sbjct: 187 LRSYQKEAVDAFYSGGAVTGGSGVLVLPCGAGKTIIGLGAICQLQTATLIL 237
>gi|320531739|ref|ZP_08032671.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320136044|gb|EFW28060.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 560
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG + L+L + V
Sbjct: 198 LRPYQTEAVESFWAGG---SGVVVLPCGAGKTLVGAASMAKSSTTTLILVTNTV 248
>gi|379056789|ref|ZP_09847315.1| DNA/RNA helicase [Serinicoccus profundi MCCC 1A05965]
Length = 562
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 186 LRPYQQQAVDGFWDGG---SGVVVLPCGAGKTLVGAGAMARSSTTTLILVTNTV 236
>gi|253575758|ref|ZP_04853093.1| type III restriction protein res subunit [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251844801|gb|EES72814.1| type III restriction protein res subunit [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 564
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 11 LRPYQEKSLRKMFGN-GRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LRPYQ++++ G G SGV+VLPCGAGK++VG+ A + L+L ++
Sbjct: 193 LRPYQQEAVAAFAGKAGEGGSGVVVLPCGAGKTVVGLAAMERFQCETLILTSN 245
>gi|269837747|ref|YP_003319975.1| type III restriction protein res subunit [Sphaerobacter
thermophilus DSM 20745]
gi|269787010|gb|ACZ39153.1| type III restriction protein res subunit [Sphaerobacter
thermophilus DSM 20745]
Length = 530
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
L+P LRPYQ +++R+ F GV++LPCGAGK++VGV ++ L++ S
Sbjct: 169 LRPDVRLRPYQAEAVRR-FVERAVTGGVVLLPCGAGKTVVGVAIAAVLQSATLIVTPSRT 227
Query: 65 V 65
+
Sbjct: 228 I 228
>gi|417932536|ref|ZP_12575874.1| type III restriction enzyme, res subunit [Propionibacterium acnes
SK182B-JCVI]
gi|340774172|gb|EGR96659.1| type III restriction enzyme, res subunit [Propionibacterium acnes
SK182B-JCVI]
Length = 553
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + + + G SGV+VLPCGAGK++VG TA L+L + V
Sbjct: 185 LRPYQKVAAQSFWDGG---SGVVVLPCGAGKTIVGATAMSLAHCTTLILVTNTV 235
>gi|398813510|ref|ZP_10572205.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
gi|398038487|gb|EJL31647.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
Length = 554
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ++++ + G SGV+VLPCGAGK+++G+ A C ++ L+L
Sbjct: 184 LRSYQKEAVDAFYSGGAVTGGSGVLVLPCGAGKTVIGLGAICQLQTATLIL 234
>gi|227496346|ref|ZP_03926637.1| ATP-dependent DNA helicase [Actinomyces urogenitalis DSM 15434]
gi|226834122|gb|EEH66505.1| ATP-dependent DNA helicase [Actinomyces urogenitalis DSM 15434]
Length = 559
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG + L+L + V
Sbjct: 197 LRPYQAEAVDAFWAGG---SGVVVLPCGAGKTLVGAASMARSSTTTLILVTNAV 247
>gi|329941405|ref|ZP_08290684.1| DNA helicase [Streptomyces griseoaurantiacus M045]
gi|329299936|gb|EGG43835.1| DNA helicase [Streptomyces griseoaurantiacus M045]
Length = 798
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG + + L+L + V
Sbjct: 430 LRPYQKQAVENFWHGG---SGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTV 480
>gi|326773086|ref|ZP_08232370.1| ATP-dependent DNA helicase [Actinomyces viscosus C505]
gi|326637718|gb|EGE38620.1| ATP-dependent DNA helicase [Actinomyces viscosus C505]
Length = 564
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG + L+L + V
Sbjct: 198 LRPYQCEAVESFWAGG---SGVVVLPCGAGKTLVGAASMAKSSTTTLILVTNAV 248
>gi|400293000|ref|ZP_10794891.1| type III restriction enzyme, res subunit, partial [Actinomyces
naeslundii str. Howell 279]
gi|399901890|gb|EJN84754.1| type III restriction enzyme, res subunit, partial [Actinomyces
naeslundii str. Howell 279]
Length = 449
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+L G + L+L + V
Sbjct: 198 LRPYQSEAVESFWAGG---SGVVVLPCGAGKTLAGAASMAKSSTTTLILVTNAV 248
>gi|257067983|ref|YP_003154238.1| DNA/RNA helicase, superfamily II [Brachybacterium faecium DSM 4810]
gi|256558801|gb|ACU84648.1| DNA/RNA helicase, superfamily II [Brachybacterium faecium DSM 4810]
Length = 555
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ G SGV+VLPCGAGK++VG A + + L+L S V
Sbjct: 182 LRPYQAEAVDGFRHGG---SGVVVLPCGAGKTIVGAGAMAAMGRTTLILVTSTV 232
>gi|256397207|ref|YP_003118771.1| helicase domain-containing protein [Catenulispora acidiphila DSM
44928]
gi|256363433|gb|ACU76930.1| helicase domain protein [Catenulispora acidiphila DSM 44928]
Length = 548
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+ + G SGVIVLPCGAGK++VG A V L+L + V
Sbjct: 180 LRPYQKDAAEGFRHGG---SGVIVLPCGAGKTIVGAAAMAGVEATTLILVTNTV 230
>gi|445063350|ref|ZP_21375562.1| DNA or RNA helicase of superfamily II [Brachyspira hampsonii 30599]
gi|444505257|gb|ELV05807.1| DNA or RNA helicase of superfamily II [Brachyspira hampsonii 30599]
Length = 564
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVVFC 67
LR YQ+ S+ + +G+ +GVI LPCG GK++VG+ A + + L++ +GV C
Sbjct: 188 LRDYQKNSVDAFYADGKPEGGAGVIALPCGTGKTIVGIAAMHKTQTKTLIIV-TGVTAC 245
>gi|385652085|ref|ZP_10046638.1| DNA repair helicase [Leucobacter chromiiresistens JG 31]
Length = 554
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ K++ R SGV+VLPCGAGK++VG + V + L+L + V
Sbjct: 192 LRDYQAKAVEAF---QRGGSGVVVLPCGAGKTIVGAASMAAVGAKTLILVTNAV 242
>gi|373252226|ref|ZP_09540344.1| helicase domain-containing protein [Nesterenkonia sp. F]
Length = 544
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ++++ + G SGV+VLPCGAGK+LVG L+L NS V
Sbjct: 177 LRGYQQEAMDNFWAAG---SGVVVLPCGAGKTLVGAGVMAVSSTITLILVNSTV 227
>gi|421074772|ref|ZP_15535796.1| type III restriction protein res subunit [Pelosinus fermentans
JBW45]
gi|392527131|gb|EIW50233.1| type III restriction protein res subunit [Pelosinus fermentans
JBW45]
Length = 584
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 1 MTIDLKPSAV------LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTV 52
+ I L+P+ + LR YQ +++ + GR SGV+VLPCGAGK+++G+ A V
Sbjct: 188 LAIALRPTDLTGREFSLRDYQRQAVDLFYDGGRETGGSGVLVLPCGAGKTIIGIGAMERV 247
Query: 53 RKRALVLCNS 62
L+L S
Sbjct: 248 GMNTLILTTS 257
>gi|429125100|ref|ZP_19185632.1| DNA or RNA helicase of superfamily II [Brachyspira hampsonii 30446]
gi|426279162|gb|EKV56189.1| DNA or RNA helicase of superfamily II [Brachyspira hampsonii 30446]
Length = 564
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVVFC 67
LR YQ+ S+ + +G+ +GVI LPCG GK++VG+ A + + L++ +GV C
Sbjct: 188 LRDYQKNSVDAFYADGKPEGGAGVIALPCGTGKTVVGIAAMHKTQTKTLIIV-TGVTAC 245
>gi|225619690|ref|YP_002720947.1| DNA or RNA helicase of superfamily II [Brachyspira hyodysenteriae
WA1]
gi|225214509|gb|ACN83243.1| DNA or RNA helicase of superfamily II [Brachyspira hyodysenteriae
WA1]
Length = 564
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVVFC 67
LR YQ+ S+ + +G+ +GVI LPCG GK++VG+ A + + L++ +GV C
Sbjct: 188 LRDYQKNSVDAFYADGKPEGGAGVIALPCGTGKTVVGIAAMHKTQTKTLIIV-TGVTAC 245
>gi|374631954|ref|ZP_09704328.1| DNA/RNA helicase, superfamily II [Metallosphaera yellowstonensis
MK1]
gi|373525784|gb|EHP70564.1| DNA/RNA helicase, superfamily II [Metallosphaera yellowstonensis
MK1]
Length = 443
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
++ VLR YQE++L+ R G++VLP GAGK+ VG+ A T+R +LV+
Sbjct: 63 IRDKLVLREYQERALKSWMVR---RRGIVVLPTGAGKTAVGIKAISTLRVSSLVV 114
>gi|336120274|ref|YP_004575054.1| ATP-dependent DNA helicase [Microlunatus phosphovorus NM-1]
gi|334688066|dbj|BAK37651.1| putative ATP-dependent DNA helicase [Microlunatus phosphovorus
NM-1]
Length = 548
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+++ + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 185 LRPYQQQAADSFWHGG---SGVVVLPCGAGKTVVGAASMAHAQATTLILVTNTV 235
>gi|332797925|ref|YP_004459425.1| nucleotide excision repair helicase, Xpb2 [Acidianus hospitalis W1]
gi|332695660|gb|AEE95127.1| nucleotide excision repair helicase, Xpb2 [Acidianus hospitalis W1]
Length = 449
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ K+L F N R G+IVLP GAGK+ VG+ A V+ L+L
Sbjct: 69 LRDYQAKAL--FFWNRAGRRGIIVLPTGAGKTAVGIKAITKVKTSTLIL 115
>gi|340793573|ref|YP_004759036.1| hypothetical protein CVAR_0611 [Corynebacterium variabile DSM
44702]
gi|340533483|gb|AEK35963.1| hypothetical protein CVAR_0611 [Corynebacterium variabile DSM
44702]
Length = 548
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 186 LRDYQEMAAESFWSGG---SGVVVLPCGAGKTMVGAAAMAKSKTTTLILVTNTV 236
>gi|256825951|ref|YP_003149911.1| DNA/RNA helicase [Kytococcus sedentarius DSM 20547]
gi|256689344|gb|ACV07146.1| DNA/RNA helicase, superfamily II [Kytococcus sedentarius DSM 20547]
Length = 550
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQE ++ G SGV+VLPCGAGK+LVG A L+L
Sbjct: 180 LRPYQEHAVDGFTDGG---SGVVVLPCGAGKTLVGAGAMARQETTTLIL 225
>gi|384209279|ref|YP_005594999.1| DNA or RNA helicase of superfamily II [Brachyspira intermedia
PWS/A]
gi|343386929|gb|AEM22419.1| DNA or RNA helicase of superfamily II [Brachyspira intermedia
PWS/A]
Length = 564
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVVFC 67
LR YQ S+ + +G+ +GVI LPCG GK++VG+ A + + L++ +GV C
Sbjct: 188 LRDYQRNSVDAFYADGKPEGGAGVIALPCGTGKTVVGIAAMHKTQTKTLIIV-TGVTAC 245
>gi|261416532|ref|YP_003250215.1| type III restriction protein res subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|385791387|ref|YP_005822510.1| putative helicase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261372988|gb|ACX75733.1| type III restriction protein res subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302326811|gb|ADL26012.1| putative helicase [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 591
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 2 TIDLKPSAVLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
T+ KP LR YQ+ + + + +G + SGVIVLPCG+GK+++G+ V+ + L+L
Sbjct: 179 TVSGKPFK-LRDYQKDAAQVFYASGSEKGGSGVIVLPCGSGKTVIGLATMALVQTKTLIL 237
>gi|251797763|ref|YP_003012494.1| type III restriction protein res subunit [Paenibacillus sp. JDR-2]
gi|247545389|gb|ACT02408.1| type III restriction protein res subunit [Paenibacillus sp. JDR-2]
Length = 554
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 1 MTIDLKP------SAVLRPYQEKSLRKMFGNG--RARSGVIVLPCGAGKSLVGVTACCTV 52
+++ L+P S LR YQ +++ + G + SGVIVLPCGAGK++VG+ A +
Sbjct: 172 LSVALRPLTMSGRSFELRDYQREAVDLFYKEGTIQGGSGVIVLPCGAGKTIVGIAALARL 231
Query: 53 RKRALVLCNSG 63
L+L ++
Sbjct: 232 NSATLILTSNA 242
>gi|452991606|emb|CCQ97028.1| putative ATP-dependent helicase [Clostridium ultunense Esp]
Length = 580
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSG 63
LR YQ +++ G A SGV+VLPCGAGK++VG+ V+ L+L +G
Sbjct: 192 LRDYQSEAVEAFHAQGSAYGGSGVLVLPCGAGKTIVGLGVMEKVKMETLILTTNG 246
>gi|152967555|ref|YP_001363339.1| helicase domain-containing protein [Kineococcus radiotolerans
SRS30216]
gi|151362072|gb|ABS05075.1| helicase domain protein [Kineococcus radiotolerans SRS30216]
Length = 557
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL LRPYQ +++ + G SGV+VLPCGAGK+LVG A R L+L
Sbjct: 173 IDLAEDGWALRPYQSEAVDNFWNGG---SGVVVLPCGAGKTLVGAAAMAKARATTLILVT 229
Query: 62 SGV 64
+ V
Sbjct: 230 NTV 232
>gi|392959534|ref|ZP_10325017.1| type III restriction protein res subunit [Pelosinus fermentans DSM
17108]
gi|421052601|ref|ZP_15515588.1| type III restriction protein res subunit [Pelosinus fermentans B4]
gi|421062252|ref|ZP_15524439.1| type III restriction protein res subunit [Pelosinus fermentans B3]
gi|421064029|ref|ZP_15525951.1| type III restriction protein res subunit [Pelosinus fermentans A12]
gi|421070443|ref|ZP_15531577.1| helicase domain-containing protein [Pelosinus fermentans A11]
gi|392442914|gb|EIW20475.1| type III restriction protein res subunit [Pelosinus fermentans B4]
gi|392444064|gb|EIW21536.1| type III restriction protein res subunit [Pelosinus fermentans B3]
gi|392448621|gb|EIW25810.1| helicase domain-containing protein [Pelosinus fermentans A11]
gi|392456473|gb|EIW33222.1| type III restriction protein res subunit [Pelosinus fermentans DSM
17108]
gi|392461889|gb|EIW38034.1| type III restriction protein res subunit [Pelosinus fermentans A12]
Length = 584
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ +++ + GR SGV+VLPCGAGK+++G+ A V L+L S
Sbjct: 204 LRDYQRQAVDLFYDGGRETGGSGVLVLPCGAGKTIIGIGAMEKVGMNTLILTTS 257
>gi|374815582|ref|ZP_09719319.1| DNA or RNA helicase of superfamily II [Treponema primitia ZAS-1]
Length = 579
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ ++ R + GN SG V+VLPCG+GK++VG+ ++ LVL
Sbjct: 199 LRDYQSEAARSVLGNNGPGSGYGVVVLPCGSGKTMVGMALMSLLKTNTLVL 249
>gi|262198150|ref|YP_003269359.1| type III restriction protein res subunit [Haliangium ochraceum DSM
14365]
gi|262081497|gb|ACY17466.1| type III restriction protein res subunit [Haliangium ochraceum DSM
14365]
Length = 479
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 12 RPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
RPYQE++L N + GV+VLP G+GKSLV +TA R+ ALV+
Sbjct: 103 RPYQEEALAAW--NAQRGRGVVVLPTGSGKSLVALTAIDAKRRAALVV 148
>gi|269957708|ref|YP_003327497.1| type III restriction protein res subunit [Xylanimonas
cellulosilytica DSM 15894]
gi|269306389|gb|ACZ31939.1| type III restriction protein res subunit [Xylanimonas
cellulosilytica DSM 15894]
Length = 558
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK++VG A L+L + V
Sbjct: 192 LRPYQAQAVDAFWFGG---SGVVVLPCGAGKTIVGAAAMAKSGTTTLILVTNTV 242
>gi|269796419|ref|YP_003315874.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542]
gi|269098604|gb|ACZ23040.1| DNA/RNA helicase, superfamily II [Sanguibacter keddieii DSM 10542]
Length = 558
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 11/70 (15%)
Query: 3 IDLKPSAV--------LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRK 54
IDL P+ +RPYQ++++ + G SGV+VLPCGAGK++VG A
Sbjct: 173 IDLSPTDPGHDDKPWEMRPYQQQAVDGFWHGG---SGVVVLPCGAGKTIVGAGAMARSGT 229
Query: 55 RALVLCNSGV 64
L+L + V
Sbjct: 230 TTLILVTNTV 239
>gi|306835555|ref|ZP_07468568.1| probable ATP-dependent DNA helicase [Corynebacterium accolens ATCC
49726]
gi|304568555|gb|EFM44107.1| probable ATP-dependent DNA helicase [Corynebacterium accolens ATCC
49726]
Length = 540
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 180 LRDYQEYATDAFWSGG---SGVVVLPCGAGKTIVGAAAMAKAQSTTLILVTNTV 230
>gi|227501402|ref|ZP_03931451.1| ATP-dependent DNA helicase [Corynebacterium accolens ATCC 49725]
gi|227077427|gb|EEI15390.1| ATP-dependent DNA helicase [Corynebacterium accolens ATCC 49725]
Length = 541
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 180 LRDYQEYATDAFWSGG---SGVVVLPCGAGKTIVGAAAMAKAQSTTLILVTNTV 230
>gi|261346080|ref|ZP_05973724.1| putative helicase, ATP-dependent [Providencia rustigianii DSM
4541]
gi|282565732|gb|EFB71267.1| putative helicase, ATP-dependent [Providencia rustigianii DSM
4541]
Length = 591
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALV 58
M + L PS LRPYQ++++ R + VIVLP GAGKSLV R R LV
Sbjct: 1 MPVTLSPSFTLRPYQQEAVDATIHYFRRHTEPAVIVLPTGAGKSLVIAELARLARGRVLV 60
Query: 59 LCN 61
L +
Sbjct: 61 LAH 63
>gi|334562936|ref|ZP_08515927.1| putative helicase [Corynebacterium bovis DSM 20582]
Length = 553
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG A R L+L + V
Sbjct: 186 LRDYQQMAADSFWDGG---SGVVVLPCGAGKTMVGAAAMARSRTTTLILVTNTV 236
>gi|374586244|ref|ZP_09659336.1| helicase domain-containing protein [Leptonema illini DSM 21528]
gi|373875105|gb|EHQ07099.1| helicase domain-containing protein [Leptonema illini DSM 21528]
Length = 608
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
Query: 10 VLRPYQEKSLRKMFGNGRAR---SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
V+R YQ K++ ++F G +R SGVIVLPCGAGK++VG+ V L+L
Sbjct: 187 VMRDYQRKAV-EVFHAGGSRQGGSGVIVLPCGAGKTIVGIGVMQLVGAHTLIL 238
>gi|425734424|ref|ZP_18852743.1| DNA helicase, superfamily II [Brevibacterium casei S18]
gi|425481691|gb|EKU48850.1| DNA helicase, superfamily II [Brevibacterium casei S18]
Length = 544
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ +++ + SGV+VLPCGAGK++VGV V+ L+L + V
Sbjct: 185 LRDYQREAIDQSLA---GESGVVVLPCGAGKTVVGVATMSRVQTTTLILVTNSV 235
>gi|333997565|ref|YP_004530177.1| DNA or RNA helicase of superfamily II [Treponema primitia ZAS-2]
gi|333740745|gb|AEF86235.1| DNA or RNA helicase of superfamily II [Treponema primitia ZAS-2]
Length = 599
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
S LR YQ ++ R + GN +G V+VLPCG+GK++VG+ ++ LVL
Sbjct: 210 SFTLRDYQAEAARSVLGNNGPGTGYGVVVLPCGSGKTMVGMALMTLLKTNTLVL 263
>gi|448747165|ref|ZP_21728827.1| UvrABC complex, subunit B [Halomonas titanicae BH1]
gi|445565325|gb|ELY21436.1| UvrABC complex, subunit B [Halomonas titanicae BH1]
Length = 611
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
P+ LRPYQ+++++++ + RA S ++VLP G+GKSLV R R LVL +
Sbjct: 12 PTPQLRPYQQEAVKRVVSHFRASSEPALVVLPTGSGKSLVIAELARLARGRVLVLAH 68
>gi|326332145|ref|ZP_08198429.1| putative ATP-dependent DNA helicase [Nocardioidaceae bacterium
Broad-1]
gi|325950116|gb|EGD42172.1| putative ATP-dependent DNA helicase [Nocardioidaceae bacterium
Broad-1]
Length = 549
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ ++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRPYQSEAAESFWHGG---SGVVVLPCGAGKTLVGAAAMAHAQATTLILVTNTV 232
>gi|170783064|ref|YP_001711398.1| DNA repair helicase [Clavibacter michiganensis subsp. sepedonicus]
gi|169157634|emb|CAQ02832.1| putative DNA repair helicase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 546
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRGYQNDAVDHFLDGG---SGVVVLPCGAGKTLVGAAAMARAKTTTLILVTNTV 232
>gi|329922713|ref|ZP_08278265.1| helicase C-terminal domain protein [Paenibacillus sp. HGF5]
gi|328942055|gb|EGG38338.1| helicase C-terminal domain protein [Paenibacillus sp. HGF5]
Length = 595
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Query: 10 VLRPYQEK---SLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
VLR YQ+K S R + G G +GV+VLPCGAGK+++G+ A ++ L+L ++
Sbjct: 200 VLRDYQQKAVDSFRDIGGEGG--NGVLVLPCGAGKTVIGIAAMRELQCETLILTSN 253
>gi|261405781|ref|YP_003242022.1| type III restriction protein res subunit [Paenibacillus sp.
Y412MC10]
gi|261282244|gb|ACX64215.1| type III restriction protein res subunit [Paenibacillus sp.
Y412MC10]
Length = 595
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Query: 10 VLRPYQEK---SLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
VLR YQ+K S R + G G +GV+VLPCGAGK+++G+ A ++ L+L ++
Sbjct: 200 VLRDYQQKAAESFRDIGGEGG--NGVLVLPCGAGKTVIGIAAMRELQCETLILTSN 253
>gi|260904266|ref|ZP_05912588.1| type III restriction protein res subunit [Brevibacterium linens
BL2]
Length = 544
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ++++ SGV+VLPCGAGK++VGV V+ L+L + V
Sbjct: 185 LRDYQKEAIDHSLS---GESGVVVLPCGAGKTIVGVATMSRVQTTTLILVTNSV 235
>gi|333372011|ref|ZP_08463948.1| DNA repair helicase [Desmospora sp. 8437]
gi|332975087|gb|EGK11992.1| DNA repair helicase [Desmospora sp. 8437]
Length = 569
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ++++ + G A SGV+VLPCGAGK+++G+ V + L+L
Sbjct: 196 LRTYQKRAVESFYREGDATGGSGVLVLPCGAGKTVIGMAVMEKVGRATLIL 246
>gi|148273657|ref|YP_001223218.1| putative ATP-dependent DNA helicase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147831587|emb|CAN02555.1| putative ATP-dependent DNA helicase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 554
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 190 LRGYQTDAVDHFLDGG---SGVVVLPCGAGKTLVGAAAMARAKTTTLILVTNTV 240
>gi|345857196|ref|ZP_08809642.1| putative DNA HELICASE ERCC3 [Desulfosporosinus sp. OT]
gi|344329735|gb|EGW41067.1| putative DNA HELICASE ERCC3 [Desulfosporosinus sp. OT]
Length = 569
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLC--NSGV 64
LR YQ++++ G R SGV+VLPCGAGK+++G+ A ++ L+L NS V
Sbjct: 198 LRSYQQEAVATFHQQGSVRGGSGVLVLPCGAGKTVIGMGAMIELQCETLILTTNNSSV 255
>gi|330835320|ref|YP_004410048.1| DNA repair helicase RAD25 [Metallosphaera cuprina Ar-4]
gi|329567459|gb|AEB95564.1| DNA repair helicase RAD25 [Metallosphaera cuprina Ar-4]
Length = 443
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+K + LR YQE++LR R GV+VLP GAGK+++G+ A T++ L++
Sbjct: 63 VKDNIKLREYQERALRLWLSRKR---GVLVLPTGAGKTVIGIKALSTLKVATLIV 114
>gi|386346047|ref|YP_006044296.1| type III restriction protein res subunit [Spirochaeta thermophila
DSM 6578]
gi|339411014|gb|AEJ60579.1| type III restriction protein res subunit [Spirochaeta thermophila
DSM 6578]
Length = 563
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 6 KPSAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
+P A LRPYQE +++ G+ +G IV+PCGAGK++VG+ R L+L
Sbjct: 188 RPFA-LRPYQEAAVKAFTGDDGPGTGYGTIVMPCGAGKTVVGLALMAHYRTSTLIL 242
>gi|307718024|ref|YP_003873556.1| DNA-helicase [Spirochaeta thermophila DSM 6192]
gi|306531749|gb|ADN01283.1| putative DNA-helicase [Spirochaeta thermophila DSM 6192]
Length = 588
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 6 KPSAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
+P A LRPYQE +++ G+ +G IV+PCGAGK++VG+ R L+L
Sbjct: 213 RPFA-LRPYQEAAVKAFTGDDGPGTGYGTIVMPCGAGKTVVGLALMAHYRTSTLIL 267
>gi|255325614|ref|ZP_05366713.1| DNA or RNA helicase of superfamily II [Corynebacterium
tuberculostearicum SK141]
gi|255297327|gb|EET76645.1| DNA or RNA helicase of superfamily II [Corynebacterium
tuberculostearicum SK141]
Length = 541
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG A L+L + V
Sbjct: 180 LRDYQQYATEAFWSGG---SGVVVLPCGAGKTIVGAAAMAKAESTTLILVTNTV 230
>gi|311740929|ref|ZP_07714756.1| ATP-dependent DNA helicase [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304449|gb|EFQ80525.1| ATP-dependent DNA helicase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 541
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG A L+L + V
Sbjct: 180 LRDYQQYATEAFWSGG---SGVVVLPCGAGKTIVGAAAMAKAESTTLILVTNTV 230
>gi|304404122|ref|ZP_07385784.1| type III restriction protein res subunit [Paenibacillus
curdlanolyticus YK9]
gi|304347100|gb|EFM12932.1| type III restriction protein res subunit [Paenibacillus
curdlanolyticus YK9]
Length = 568
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
VLR YQ +++ + G SGV+VLPCGAGK+++G+ A ++ L++ +S
Sbjct: 193 VLRDYQHEAVERFHEEGTVAGGSGVMVLPCGAGKTIIGIGAVARLQCATLIVTSS 247
>gi|448824182|ref|YP_007417351.1| putative helicase [Corynebacterium urealyticum DSM 7111]
gi|448277679|gb|AGE37103.1| putative helicase [Corynebacterium urealyticum DSM 7111]
Length = 556
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 187 LRDYQEMAADSFWEGG---SGVVVLPCGAGKTMVGAASMAKAKATTLILVTNTV 237
>gi|68535479|ref|YP_250184.1| helicase [Corynebacterium jeikeium K411]
gi|68263078|emb|CAI36566.1| putative helicase [Corynebacterium jeikeium K411]
Length = 548
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQEMAADSFWEGG---SGVVVLPCGAGKTMVGAASMAKAKATTLILVTNTV 236
>gi|172041254|ref|YP_001800968.1| helicase [Corynebacterium urealyticum DSM 7109]
gi|171852558|emb|CAQ05534.1| putative helicase [Corynebacterium urealyticum DSM 7109]
Length = 555
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQEMAADSFWEGG---SGVVVLPCGAGKTMVGAASMAKAKATTLILVTNTV 236
>gi|172041250|ref|YP_001800964.1| helicase [Corynebacterium urealyticum DSM 7109]
gi|448824179|ref|YP_007417348.1| putative helicase [Corynebacterium urealyticum DSM 7111]
gi|171852554|emb|CAQ05530.1| putative helicase [Corynebacterium urealyticum DSM 7109]
gi|448277676|gb|AGE37100.1| putative helicase [Corynebacterium urealyticum DSM 7111]
Length = 526
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQEMAADSFWEGG---SGVVVLPCGAGKTMVGAASMAKAKATTLILVTNTV 236
>gi|334338040|ref|YP_004543192.1| helicase domain-containing protein [Isoptericola variabilis 225]
gi|334108408|gb|AEG45298.1| helicase domain-containing protein [Isoptericola variabilis 225]
Length = 559
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+RPYQ +++ + G SGV+VLPCGAGK++VG A L+L + V
Sbjct: 193 MRPYQAQAVDGFWHGG---SGVVVLPCGAGKTIVGAGAMAKSGTTTLILVTNTV 243
>gi|320103370|ref|YP_004178961.1| type III restriction protein res subunit [Isosphaera pallida ATCC
43644]
gi|319750652|gb|ADV62412.1| type III restriction protein res subunit [Isosphaera pallida ATCC
43644]
Length = 568
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRK 54
+R YQ ++ G R SGV+VLPCGAGK++VG+ A V+K
Sbjct: 189 VRDYQRMAVEAYHAGGDVRGGSGVVVLPCGAGKTIVGLAAMAAVQK 234
>gi|284033810|ref|YP_003383741.1| helicase domain-containing protein [Kribbella flavida DSM 17836]
gi|283813103|gb|ADB34942.1| helicase domain protein [Kribbella flavida DSM 17836]
Length = 546
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ+++ + G SGV+VLPCGAGK++VG A L+L + V
Sbjct: 182 LRPYQQQAADSFWHGG---SGVVVLPCGAGKTIVGAAAMAQASATTLILVTNTV 232
>gi|389860558|ref|YP_006362797.1| DNA repair helicase RAD25 [Thermogladius cellulolyticus 1633]
gi|388525461|gb|AFK50659.1| DNA repair helicase RAD25 [Thermogladius cellulolyticus 1633]
Length = 545
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 3 IDLKPSAV---LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+ KP V LR YQE++L K N +G+I LP G+GK+++GV A + +R L++
Sbjct: 155 LPFKPELVNVKLRDYQEEALAKWLEN--KGTGIIALPTGSGKTVIGVAAITKISERTLIV 212
>gi|68535483|ref|YP_250188.1| helicase [Corynebacterium jeikeium K411]
gi|68263082|emb|CAI36570.1| putative helicase [Corynebacterium jeikeium K411]
Length = 526
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG + + L+L + +
Sbjct: 186 LRDYQEMAADSFWEGG---SGVVVLPCGAGKTMVGAASMAKAKATTLILVTNTI 236
>gi|296242953|ref|YP_003650440.1| DNA repair helicase RAD25 [Thermosphaera aggregans DSM 11486]
gi|296095537|gb|ADG91488.1| DNA repair helicase RAD25 [Thermosphaera aggregans DSM 11486]
Length = 550
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 3 IDLKPSAV---LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+ LKP V LR YQ+++L K N G++ LP G+GK+L+GV+A +R+L++
Sbjct: 155 LPLKPELVNVSLRNYQQEALDKWRSNNY--QGIVALPTGSGKTLIGVSAVVLTGRRSLII 212
>gi|374326653|ref|YP_005084853.1| helicase [Pyrobaculum sp. 1860]
gi|356641922|gb|AET32601.1| helicase [Pyrobaculum sp. 1860]
Length = 451
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ ++L+ + + GV+V+P GAGK+ V + A +R+ ALV+
Sbjct: 78 LRPYQHEALKSWL---KTKRGVVVMPTGAGKTHVAIAAIAELREPALVV 123
>gi|330836652|ref|YP_004411293.1| helicase [Sphaerochaeta coccoides DSM 17374]
gi|329748555|gb|AEC01911.1| helicase domain protein [Sphaerochaeta coccoides DSM 17374]
Length = 555
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
+R YQE + R + G+ +G IVLPCGAGK++VG+ ++ R L+L
Sbjct: 189 IRDYQEAAARSLLGDRGPGTGYGTIVLPCGAGKTIVGMDVMSLLQIRTLIL 239
>gi|408793028|ref|ZP_11204638.1| type III restriction enzyme, res subunit [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408464438|gb|EKJ88163.1| type III restriction enzyme, res subunit [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 565
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+R YQ S+ GR SGV+VLPCGAGK++VG+ V L+L
Sbjct: 185 MRDYQRASVEAFHAGGRNEGGSGVVVLPCGAGKTIVGMGVMQIVGAETLIL 235
>gi|183221905|ref|YP_001839901.1| putative DNA repair helicase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911974|ref|YP_001963529.1| DNA or RNA helicase of superfamily II [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776650|gb|ABZ94951.1| DNA or RNA helicase of superfamily II [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167780327|gb|ABZ98625.1| Putative DNA repair helicase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 565
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+R YQ S+ GR SGV+VLPCGAGK++VG+ V L+L
Sbjct: 185 MRDYQRASVEAFHAGGRNEGGSGVVVLPCGAGKTIVGMGVMQIVGAETLIL 235
>gi|451943541|ref|YP_007464177.1| DNA helicase [Corynebacterium halotolerans YIM 70093 = DSM 44683]
gi|451902928|gb|AGF71815.1| DNA helicase [Corynebacterium halotolerans YIM 70093 = DSM 44683]
Length = 555
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG + R L+L + V
Sbjct: 186 LRDYQRYAADSFWEGG---SGVVVLPCGAGKTMVGAASMAKARATTLILVTNTV 236
>gi|374315062|ref|YP_005061490.1| DNA/RNA helicase [Sphaerochaeta pleomorpha str. Grapes]
gi|359350706|gb|AEV28480.1| DNA/RNA helicase, superfamily II [Sphaerochaeta pleomorpha str.
Grapes]
Length = 553
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
+RPYQ ++ + + G+ G IVLPCG+GK++VG+T ++ R L++
Sbjct: 187 VRPYQTQAAQALLGDQGPGCGYGTIVLPCGSGKTVVGMTIMSQLKTRTLIV 237
>gi|452949117|gb|EME54588.1| DNA excision repair protein [Amycolatopsis decaplanina DSM 44594]
Length = 548
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ K+ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQRKAAEAFWAGG---SGVVVLPCGAGKTLVGAAAMAHAKATTLILVTNTV 232
>gi|451335877|ref|ZP_21906442.1| DNA repair helicase [Amycolatopsis azurea DSM 43854]
gi|449421769|gb|EMD27176.1| DNA repair helicase [Amycolatopsis azurea DSM 43854]
Length = 548
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ K+ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQRKAAEAFWAGG---SGVVVLPCGAGKTLVGAAAMAHAKATTLILVTNTV 232
>gi|15828157|ref|NP_302420.1| DNA helicase [Mycobacterium leprae TN]
gi|221230634|ref|YP_002504050.1| DNA helicase [Mycobacterium leprae Br4923]
gi|13093711|emb|CAC31112.1| probable DNA helicase [Mycobacterium leprae]
gi|219933741|emb|CAR72254.1| probable DNA helicase [Mycobacterium leprae Br4923]
Length = 549
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVV 65
LR YQ + + G SGV+VLPCGAGK+LVG A L+L + VV
Sbjct: 182 LRDYQRLAADSFWSGG---SGVVVLPCGAGKTLVGAAAMAKTGATTLILVTNIVV 233
>gi|302530595|ref|ZP_07282937.1| DNA helicase [Streptomyces sp. AA4]
gi|302439490|gb|EFL11306.1| DNA helicase [Streptomyces sp. AA4]
Length = 548
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ K+ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQRKAAEAFWAGG---SGVVVLPCGAGKTLVGAAAMAHAKATTLILVTNTV 232
>gi|227504269|ref|ZP_03934318.1| ATP-dependent DNA helicase [Corynebacterium striatum ATCC 6940]
gi|227199156|gb|EEI79204.1| ATP-dependent DNA helicase [Corynebacterium striatum ATCC 6940]
Length = 543
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 181 LRDYQSYAADSFWSGG---SGVVVLPCGAGKTIVGAAAMAKTQATTLILVTNTV 231
>gi|254387008|ref|ZP_05002287.1| ATP-dependent DNA helicase [Streptomyces sp. Mg1]
gi|194345832|gb|EDX26798.1| ATP-dependent DNA helicase [Streptomyces sp. Mg1]
Length = 547
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQQQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAKAKATTLILVTNTV 231
>gi|378550700|ref|ZP_09825916.1| hypothetical protein CCH26_11456 [Citricoccus sp. CH26A]
Length = 570
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ ++ + G SGV+VLPCGAGK+LVG A T LVL + V
Sbjct: 205 LRPYQRMAVENFWAGG---SGVVVLPCGAGKTLVGAGAMATAGATTLVLVTNTV 255
>gi|284989384|ref|YP_003407938.1| type III restriction protein res subunit [Geodermatophilus obscurus
DSM 43160]
gi|284062629|gb|ADB73567.1| type III restriction protein res subunit [Geodermatophilus obscurus
DSM 43160]
Length = 561
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQQEAVEGFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 232
>gi|348173118|ref|ZP_08880012.1| ATP-dependent DNA helicase [Saccharopolyspora spinosa NRRL 18395]
Length = 553
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQAQAVQSFWAGG---SGVVVLPCGAGKTLVGAAAMAEAQATTLILVTNTV 232
>gi|383806633|ref|ZP_09962195.1| DNA or RNA helicase of superfamily II [Candidatus Aquiluna sp.
IMCC13023]
gi|383299803|gb|EIC92416.1| DNA or RNA helicase of superfamily II [Candidatus Aquiluna sp.
IMCC13023]
Length = 542
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ K G SGV+VLPCGAGK++VG V+ L+L + V
Sbjct: 180 LRGYQREAADKFEIGG---SGVVVLPCGAGKTMVGAAIMADVKANTLILVTNTV 230
>gi|332380642|gb|AEE65518.1| helicase domain protein [uncultured bacterium BAC AB649/1850]
Length = 553
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL LR YQ++++ + G SGV+VLPCGAGK+LVG A T + L+L
Sbjct: 173 IDLAEDGWTLRSYQQEAVDGFWAGG---SGVVVLPCGAGKTLVGAAAMATAKATTLILVT 229
Query: 62 SGV 64
+ V
Sbjct: 230 NTV 232
>gi|237785046|ref|YP_002905751.1| putative helicase [Corynebacterium kroppenstedtii DSM 44385]
gi|237757958|gb|ACR17208.1| putative helicase [Corynebacterium kroppenstedtii DSM 44385]
Length = 558
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 190 LRDYQKLAADSFWDGG---SGVVVLPCGAGKTMVGAAAMAKSKTTTLILVTNTV 240
>gi|159039860|ref|YP_001539113.1| helicase domain-containing protein [Salinispora arenicola CNS-205]
gi|157918695|gb|ABW00123.1| helicase domain protein [Salinispora arenicola CNS-205]
Length = 559
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 188 LRSYQREAVEAFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 238
>gi|145596461|ref|YP_001160758.1| helicase domain-containing protein [Salinispora tropica CNB-440]
gi|145305798|gb|ABP56380.1| helicase domain protein [Salinispora tropica CNB-440]
Length = 581
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 210 LRSYQREAVEAFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 260
>gi|269125068|ref|YP_003298438.1| helicase domain-containing protein [Thermomonospora curvata DSM
43183]
gi|268310026|gb|ACY96400.1| helicase domain protein [Thermomonospora curvata DSM 43183]
Length = 550
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ ++ + G SGV+VLPCGAGK++VG A R L+L + V
Sbjct: 182 LRPYQREAADAFWHGG---SGVVVLPCGAGKTIVGAAAMARARATTLILVTNTV 232
>gi|330465290|ref|YP_004403033.1| helicase domain-containing protein [Verrucosispora maris AB-18-032]
gi|328808261|gb|AEB42433.1| helicase domain-containing protein [Verrucosispora maris AB-18-032]
Length = 559
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 188 LRSYQREAVEAFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 238
>gi|238062309|ref|ZP_04607018.1| helicase [Micromonospora sp. ATCC 39149]
gi|237884120|gb|EEP72948.1| helicase [Micromonospora sp. ATCC 39149]
Length = 559
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 188 LRSYQREAVEAFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 238
>gi|443288418|ref|ZP_21027512.1| Putative DNA repair helicase [Micromonospora lupini str. Lupac 08]
gi|385888559|emb|CCH15586.1| Putative DNA repair helicase [Micromonospora lupini str. Lupac 08]
Length = 559
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 188 LRSYQREAVEAFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 238
>gi|406575906|ref|ZP_11051590.1| helicase [Janibacter hoylei PVAS-1]
gi|404554681|gb|EKA60199.1| helicase [Janibacter hoylei PVAS-1]
Length = 545
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRPYQQQAVDGFWDGG---SGVVVLPCGAGKTLVGAGAMAAAKATTLILVTNTV 232
>gi|302865000|ref|YP_003833637.1| helicase domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|302567859|gb|ADL44061.1| helicase domain protein [Micromonospora aurantiaca ATCC 27029]
Length = 596
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 225 LRSYQREAVEAFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 275
>gi|383775537|ref|YP_005460103.1| putative ATP-dependent DNA helicase [Actinoplanes missouriensis
431]
gi|381368769|dbj|BAL85587.1| putative ATP-dependent DNA helicase [Actinoplanes missouriensis
431]
Length = 553
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
IDL LR YQ++++ + G SGV+VLPCGAGK+LVG A T + L+L
Sbjct: 173 IDLAQDGWTLRSYQQEAVDGFWAGG---SGVVVLPCGAGKTLVGAAAMATAKATTLILVT 229
Query: 62 SGV 64
+ V
Sbjct: 230 NTV 232
>gi|315501497|ref|YP_004080384.1| helicase domain-containing protein [Micromonospora sp. L5]
gi|315408116|gb|ADU06233.1| helicase domain protein [Micromonospora sp. L5]
Length = 615
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 244 LRSYQREAVEAFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 294
>gi|300781756|ref|ZP_07091610.1| probable ATP-dependent DNA helicase [Corynebacterium genitalium
ATCC 33030]
gi|300533463|gb|EFK54524.1| probable ATP-dependent DNA helicase [Corynebacterium genitalium
ATCC 33030]
Length = 546
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 184 LRDYQQYATESFWEGG---SGVVVLPCGAGKTIVGAASMAQAQTTTLILVTNTV 234
>gi|227542367|ref|ZP_03972416.1| ATP-dependent DNA helicase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181565|gb|EEI62537.1| ATP-dependent DNA helicase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 555
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQ + G SGV+VLPCGAGK++VG A ++ L+L + V
Sbjct: 186 MRDYQRYARDSFIAGG---SGVVVLPCGAGKTIVGAAAMAKLKTTTLILVTNTV 236
>gi|227487728|ref|ZP_03918044.1| ATP-dependent DNA helicase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092230|gb|EEI27542.1| ATP-dependent DNA helicase [Corynebacterium glucuronolyticum ATCC
51867]
Length = 555
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQ + G SGV+VLPCGAGK++VG A ++ L+L + V
Sbjct: 186 MRDYQRYARDSFIAGG---SGVVVLPCGAGKTIVGAAAMAKLKTTTLILVTNTV 236
>gi|146303366|ref|YP_001190682.1| DNA repair helicase RAD25 [Metallosphaera sedula DSM 5348]
gi|145701616|gb|ABP94758.1| DNA repair helicase RAD25 [Metallosphaera sedula DSM 5348]
Length = 443
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+K S LR YQE++++ R GV+VLP GAGK+ +G+ A +R LV+
Sbjct: 63 VKDSLKLRDYQERAMKAWMAKKR---GVLVLPTGAGKTALGIKAIANLRVATLVV 114
>gi|386845478|ref|YP_006263491.1| DNA excision repair protein ERCC-3 [Actinoplanes sp. SE50/110]
gi|359832982|gb|AEV81423.1| DNA excision repair protein ERCC-3 [Actinoplanes sp. SE50/110]
Length = 548
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ++++ + G SGV+VLPCGAGK+LVG A T + L+L + V
Sbjct: 182 LRSYQQEAVDGFWAGG---SGVVVLPCGAGKTLVGAAAMATAKATTLILVTNTV 232
>gi|448739824|ref|ZP_21721828.1| DNA repair protein rad25 [Halococcus thailandensis JCM 13552]
gi|445798490|gb|EMA48894.1| DNA repair protein rad25 [Halococcus thailandensis JCM 13552]
Length = 597
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LRPYQ ++++ M + GV+ LP G GK++VG+ + RALVL +S
Sbjct: 198 LRPYQREAIQAMLDDD---GGVVALPTGTGKTVVGLRFIHALESRALVLVHS 246
>gi|114777697|ref|ZP_01452657.1| DEAD/DEAH box helicase-like protein [Mariprofundus ferrooxydans
PV-1]
gi|114551913|gb|EAU54447.1| DEAD/DEAH box helicase-like protein [Mariprofundus ferrooxydans
PV-1]
Length = 554
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 4 DLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
D +P A LR YQ++++ +G GVIVL CGAGK+LVG+ + R L++
Sbjct: 185 DQRPFA-LRDYQQQAVDAFVASGS--HGVIVLACGAGKTLVGMATMARIGMRTLII 237
>gi|260579780|ref|ZP_05847634.1| helicase domain protein, partial [Corynebacterium jeikeium ATCC
43734]
gi|258602081|gb|EEW15404.1| helicase domain protein [Corynebacterium jeikeium ATCC 43734]
Length = 362
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 12 RPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
R YQE + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 1 RDYQEMAADSFWEGG---SGVVVLPCGAGKTMVGAASMAKAKATTLILVTNTV 50
>gi|317123892|ref|YP_004098004.1| helicase [Intrasporangium calvum DSM 43043]
gi|315587980|gb|ADU47277.1| helicase domain protein [Intrasporangium calvum DSM 43043]
Length = 550
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 188 LRPYQQQAVDGFWHGG---SGVVVLPCGAGKTLVGAGAMAAAKATTLILVTNTV 238
>gi|389862535|ref|YP_006364775.1| DNA helicase, superfamily II [Modestobacter marinus]
gi|388484738|emb|CCH86278.1| Putative DNA helicase, superfamily II [Modestobacter marinus]
Length = 561
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQQEAVDGFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 232
>gi|379734135|ref|YP_005327640.1| putative DNA helicase, superfamily II [Blastococcus saxobsidens
DD2]
gi|378781941|emb|CCG01595.1| Putative DNA helicase, superfamily II [Blastococcus saxobsidens
DD2]
Length = 561
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQQEAVDGFWAGG---SGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTV 232
>gi|338536925|ref|YP_004670259.1| putative helicase [Myxococcus fulvus HW-1]
gi|337263021|gb|AEI69181.1| putative helicase [Myxococcus fulvus HW-1]
Length = 482
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
P+ LR YQ ++ K+ + G +VLPCGAGKS++ V A +R LVL ++
Sbjct: 113 PTVPLRDYQAAAVEKLV---KGTQGTVVLPCGAGKSVLAVGAMARLRTPTLVLVHT 165
>gi|115374589|ref|ZP_01461868.1| DNA repair protein RAD25 [Stigmatella aurantiaca DW4/3-1]
gi|310819926|ref|YP_003952284.1| helicase [Stigmatella aurantiaca DW4/3-1]
gi|115368355|gb|EAU67311.1| DNA repair protein RAD25 [Stigmatella aurantiaca DW4/3-1]
gi|309392998|gb|ADO70457.1| Putative helicase [Stigmatella aurantiaca DW4/3-1]
Length = 503
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
P LR YQ +++ ++ +A G+ VLPCGAGKS++ V A +R L+L ++
Sbjct: 141 PVVPLRDYQAEAVERL---AKATQGIAVLPCGAGKSVLAVGAIARLRTPTLILVHT 193
>gi|315646161|ref|ZP_07899281.1| type III restriction protein res subunit [Paenibacillus vortex
V453]
gi|315278360|gb|EFU41676.1| type III restriction protein res subunit [Paenibacillus vortex
V453]
Length = 576
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 11 LRPYQEK---SLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ+K S R + G G +GV+VLPCGAGK+++G+ A ++ L+L ++
Sbjct: 205 LREYQQKAVESFRDIGGEGG--NGVLVLPCGAGKTVIGMAAMRELQCETLILTSN 257
>gi|161899087|ref|XP_001712770.1| DNA repair and transcription protein [Bigelowiella natans]
gi|75756263|gb|ABA27158.1| DNA repair and transcription protein [Bigelowiella natans]
Length = 534
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGV 46
+ + L+P VL +QE K+ + +SG ++LPCG+GK+LVG+
Sbjct: 120 LNLRLRPGVVLYDHQEFCKVKLCIDNTVKSGYLILPCGSGKTLVGI 165
>gi|374581962|ref|ZP_09655056.1| DNA/RNA helicase, superfamily II [Desulfosporosinus youngiae DSM
17734]
gi|374418044|gb|EHQ90479.1| DNA/RNA helicase, superfamily II [Desulfosporosinus youngiae DSM
17734]
Length = 569
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 8 SAVLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLC--NSG 63
S LR YQ+ ++ G R SGV+VLPCGAGK+++G+ ++ L+L NS
Sbjct: 195 SFALRSYQQGAVATFHQQGSVRGGSGVLVLPCGAGKTVIGMGVMMELQCETLILTTNNSA 254
Query: 64 V 64
V
Sbjct: 255 V 255
>gi|357590863|ref|ZP_09129529.1| hypothetical protein CnurS_11732 [Corynebacterium nuruki S6-4]
Length = 548
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 186 LRDYQAMAADSFWEGG---SGVVVLPCGAGKTMVGAAAMAKSKTTTLILVTNTV 236
>gi|354614087|ref|ZP_09031975.1| helicase domain-containing protein [Saccharomonospora
paurometabolica YIM 90007]
gi|353221569|gb|EHB85919.1| helicase domain-containing protein [Saccharomonospora
paurometabolica YIM 90007]
Length = 548
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQRRATETFWAGG---SGVVVLPCGAGKTLVGAAAMAKAEATTLILVTNTV 232
>gi|83590752|ref|YP_430761.1| DEAD/DEAH box helicase [Moorella thermoacetica ATCC 39073]
gi|83573666|gb|ABC20218.1| DEAD/DEAH box helicase-like protein [Moorella thermoacetica ATCC
39073]
Length = 602
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LRPYQ ++ R + G +R G VIVLPCGAGK++VG+ A + L+L S
Sbjct: 189 LRPYQAEAARVFYAGGSSRGGSGVIVLPCGAGKTVVGIAAMALCQCYTLILVTS 242
>gi|212712414|ref|ZP_03320542.1| hypothetical protein PROVALCAL_03503 [Providencia alcalifaciens
DSM 30120]
gi|422017669|ref|ZP_16364232.1| ATP-dependent helicase with nucleoside triP hydrolase domain
[Providencia alcalifaciens Dmel2]
gi|212685160|gb|EEB44688.1| hypothetical protein PROVALCAL_03503 [Providencia alcalifaciens
DSM 30120]
gi|414105262|gb|EKT66821.1| ATP-dependent helicase with nucleoside triP hydrolase domain
[Providencia alcalifaciens Dmel2]
Length = 590
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
P+ LRPYQ++++ + R + VIVLP GAGKSLV R R LVL +
Sbjct: 6 PTFTLRPYQQEAVDATIAHFRRHTEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 62
>gi|327310329|ref|YP_004337226.1| helicase [Thermoproteus uzoniensis 768-20]
gi|326946808|gb|AEA11914.1| helicase, possible DNA repair [Thermoproteus uzoniensis 768-20]
Length = 457
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 2 TIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+++ LRPYQE++L R + GV+V+P GAGK+ V + A + + LV+
Sbjct: 75 SVEAAKRPALRPYQEEALSSWL---RGKRGVVVMPTGAGKTYVAIEAIARLGQSTLVV 129
>gi|379003726|ref|YP_005259398.1| DNA or RNA helicases of superfamily II [Pyrobaculum oguniense TE7]
gi|375159179|gb|AFA38791.1| DNA or RNA helicases of superfamily II [Pyrobaculum oguniense TE7]
Length = 451
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQE++LR R + GV+V+P G+GK+ V + A +++ ALV+
Sbjct: 78 LRAYQEEALRAWM---RTKRGVVVMPTGSGKTHVAIAAIAQLKEPALVV 123
>gi|145591640|ref|YP_001153642.1| type III restriction enzyme, res subunit [Pyrobaculum arsenaticum
DSM 13514]
gi|145283408|gb|ABP50990.1| DNA repair helicase RAD25 [Pyrobaculum arsenaticum DSM 13514]
Length = 451
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQE++LR R + GV+V+P G+GK+ V + A +++ ALV+
Sbjct: 78 LRAYQEEALRAWM---RTKRGVVVMPTGSGKTHVAIAAIAQLKEPALVV 123
>gi|19552043|ref|NP_600045.1| helicase [Corynebacterium glutamicum ATCC 13032]
gi|62389706|ref|YP_225108.1| superfamily II DNA/RNA helicase [Corynebacterium glutamicum ATCC
13032]
gi|145294985|ref|YP_001137806.1| hypothetical protein cgR_0930 [Corynebacterium glutamicum R]
gi|417972067|ref|ZP_12612982.1| hypothetical protein CgS9114_13620 [Corynebacterium glutamicum
S9114]
gi|418245902|ref|ZP_12872302.1| hypothetical protein KIQ_10406 [Corynebacterium glutamicum ATCC
14067]
gi|21323582|dbj|BAB98209.1| DNA or RNA helicases of superfamily II [Corynebacterium glutamicum
ATCC 13032]
gi|41325041|emb|CAF19522.1| DNA or RNA helicase of superfamily II [Corynebacterium glutamicum
ATCC 13032]
gi|140844905|dbj|BAF53904.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344043556|gb|EGV39245.1| hypothetical protein CgS9114_13620 [Corynebacterium glutamicum
S9114]
gi|354509978|gb|EHE82907.1| hypothetical protein KIQ_10406 [Corynebacterium glutamicum ATCC
14067]
gi|385142963|emb|CCH24002.1| putative helicase [Corynebacterium glutamicum K051]
Length = 557
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQQMAADSFWEGG---SGVVVLPCGAGKTMVGAASMARAQATTLILVTNTV 236
>gi|115375905|ref|ZP_01463154.1| DNA repair protein RAD25 [Stigmatella aurantiaca DW4/3-1]
gi|310819822|ref|YP_003952180.1| restriction endonuclease family protein [Stigmatella aurantiaca
DW4/3-1]
gi|115367083|gb|EAU66069.1| DNA repair protein RAD25 [Stigmatella aurantiaca DW4/3-1]
gi|309392894|gb|ADO70353.1| Restriction endonuclease family protein [Stigmatella aurantiaca
DW4/3-1]
Length = 505
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
P LR YQ ++ ++ +A G+ VLPCGAGKS++ V A +R L+L ++
Sbjct: 143 PEVPLRDYQSAAVERLV---KATQGIAVLPCGAGKSVLAVGAISRLRTPTLILVHT 195
>gi|258654903|ref|YP_003204059.1| helicase domain-containing protein [Nakamurella multipartita DSM
44233]
gi|258558128|gb|ACV81070.1| helicase domain protein [Nakamurella multipartita DSM 44233]
Length = 554
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRSYQQEAVDGFWDGG---SGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNTV 232
>gi|392551833|ref|ZP_10298970.1| ATP-dependent helicase [Pseudoalteromonas spongiae UST010723-006]
Length = 577
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRA--RSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ++++ K + R S VIVLP G+GKSLV RK+ LV+
Sbjct: 5 LRPYQQEAVEKTLAHFRKSNHSAVIVLPTGSGKSLVIAELARLARKKILVV 55
>gi|302535925|ref|ZP_07288267.1| ATP-dependent DNA helicase [Streptomyces sp. C]
gi|302444820|gb|EFL16636.1| ATP-dependent DNA helicase [Streptomyces sp. C]
Length = 547
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQAQAVEGFWHGG---SGVVVLPCGAGKTLVGAGAMAKAKATTLILVTNTV 231
>gi|375102737|ref|ZP_09749000.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea NA-134]
gi|374663469|gb|EHR63347.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea NA-134]
Length = 548
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQRRAAEAFWSGG---SGVVVLPCGAGKTLVGAAAMARAEATTLILVTNTV 232
>gi|25027447|ref|NP_737501.1| DNA helicase [Corynebacterium efficiens YS-314]
gi|259507148|ref|ZP_05750048.1| ATP-dependent DNA helicase [Corynebacterium efficiens YS-314]
gi|23492729|dbj|BAC17701.1| putative DNA helicase [Corynebacterium efficiens YS-314]
gi|259165271|gb|EEW49825.1| ATP-dependent DNA helicase [Corynebacterium efficiens YS-314]
Length = 557
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQQYAADSFWEGG---SGVVVLPCGAGKTMVGAASMARAQATTLILVTNTV 236
>gi|317048877|ref|YP_004116525.1| type III restriction protein res subunit [Pantoea sp. At-9b]
gi|316950494|gb|ADU69969.1| type III restriction protein res subunit [Pantoea sp. At-9b]
Length = 596
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 5 LKPSAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
L S LRPYQ++++ + R A VIVLP GAGKSLV R R LVL +
Sbjct: 10 LPMSFTLRPYQQEAVNATIAHFRQHASPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 68
>gi|386725786|ref|YP_006192112.1| putative ATP-dependent helicase [Paenibacillus mucilaginosus K02]
gi|384092911|gb|AFH64347.1| putative ATP-dependent helicase [Paenibacillus mucilaginosus K02]
Length = 563
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMF--GNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ ++ + G + SGV+VLPCGAGK+++G+ A + L+L ++
Sbjct: 188 LRAYQRAAVDSFYREGGTQGGSGVLVLPCGAGKTVIGIAAMGKLSCATLILTSN 241
>gi|337748137|ref|YP_004642299.1| ATP-dependent helicase [Paenibacillus mucilaginosus KNP414]
gi|379723001|ref|YP_005315132.1| putative ATP-dependent helicase [Paenibacillus mucilaginosus 3016]
gi|336299326|gb|AEI42429.1| putative ATP-dependent helicase [Paenibacillus mucilaginosus
KNP414]
gi|378571673|gb|AFC31983.1| putative ATP-dependent helicase [Paenibacillus mucilaginosus 3016]
Length = 563
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMF--GNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ ++ + G + SGV+VLPCGAGK+++G+ A + L+L ++
Sbjct: 188 LRAYQRAAVDSFYREGGTQGGSGVLVLPCGAGKTVIGIAAMGKLSCATLILTSN 241
>gi|227548339|ref|ZP_03978388.1| DNA helicase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079657|gb|EEI17620.1| DNA helicase [Corynebacterium lipophiloflavum DSM 44291]
Length = 547
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 185 LRDYQAYAAESFWEGG---SGVVVLPCGAGKTIVGAASMAQAKTTTLILVTNTV 235
>gi|334134816|ref|ZP_08508318.1| helicase C-terminal domain protein [Paenibacillus sp. HGF7]
gi|333607660|gb|EGL18972.1| helicase C-terminal domain protein [Paenibacillus sp. HGF7]
Length = 565
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMF--GNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ +++ G SGV+VLPCGAGK+++G+ A + AL+L
Sbjct: 189 LRDYQRQAVECFHPAGGSDGGSGVLVLPCGAGKTVIGIAALTKLSCAALIL 239
>gi|397653495|ref|YP_006494178.1| hypothetical protein CULC0102_0743 [Corynebacterium ulcerans 0102]
gi|393402451|dbj|BAM26943.1| hypothetical protein CULC0102_0743 [Corynebacterium ulcerans 0102]
Length = 549
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQKMAADSFWEGG---SGVVVLPCGAGKTMVGAASMAQAQATTLILVTNTV 236
>gi|337290254|ref|YP_004629275.1| hypothetical protein CULC22_00643 [Corynebacterium ulcerans
BR-AD22]
gi|384515173|ref|YP_005710265.1| hypothetical protein CULC809_00635 [Corynebacterium ulcerans 809]
gi|334696374|gb|AEG81171.1| hypothetical protein CULC809_00635 [Corynebacterium ulcerans 809]
gi|334698560|gb|AEG83356.1| hypothetical protein CULC22_00643 [Corynebacterium ulcerans
BR-AD22]
Length = 549
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQKMAADSFWEGG---SGVVVLPCGAGKTMVGAASMAQAQATTLILVTNTV 236
>gi|309812293|ref|ZP_07706048.1| helicase C-terminal domain protein [Dermacoccus sp. Ellin185]
gi|308433598|gb|EFP57475.1| helicase C-terminal domain protein [Dermacoccus sp. Ellin185]
Length = 543
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LRPYQ +++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 181 LRPYQRQAVDGFWDGG---SGVVVLPCGAGKTLVGAGAMAKAKATTLILVTNTV 231
>gi|381163282|ref|ZP_09872512.1| DNA/RNA helicase, superfamily II [Saccharomonospora azurea NA-128]
gi|418461379|ref|ZP_13032454.1| DNA/RNA helicase, superfamily II [Saccharomonospora azurea SZMC
14600]
gi|359738482|gb|EHK87367.1| DNA/RNA helicase, superfamily II [Saccharomonospora azurea SZMC
14600]
gi|379255187|gb|EHY89113.1| DNA/RNA helicase, superfamily II [Saccharomonospora azurea NA-128]
Length = 548
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQRQAAETFWAGG---SGVVVLPCGAGKTLVGAAAMAQAEATTLILVTNTV 232
>gi|331699464|ref|YP_004335703.1| type III restriction protein res subunit [Pseudonocardia
dioxanivorans CB1190]
gi|326954153|gb|AEA27850.1| type III restriction protein res subunit [Pseudonocardia
dioxanivorans CB1190]
Length = 553
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ++++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRSYQQEAVDGFWQGG---SGVVVLPCGAGKTLVGAAAMAQAKATTLILVTNTV 232
>gi|385680851|ref|ZP_10054779.1| DNA/RNA helicase, superfamily II [Amycolatopsis sp. ATCC 39116]
Length = 545
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQRQAAEAFWAGG---SGVVVLPCGAGKTLVGAAAMARAQATTLILVTNTV 232
>gi|297527466|ref|YP_003669490.1| type III restriction protein res subunit [Staphylothermus
hellenicus DSM 12710]
gi|297256382|gb|ADI32591.1| type III restriction protein res subunit [Staphylothermus
hellenicus DSM 12710]
Length = 548
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 11 LRPYQEKSLRKMF-GNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ ++L NGR G+I LP G+GK+L+G+ A R L++
Sbjct: 168 LRPYQREALEAWVKNNGR---GIIALPTGSGKTLIGIAAIAHTSLRTLII 214
>gi|213966421|ref|ZP_03394599.1| DNA or RNA helicase of superfamily II [Corynebacterium amycolatum
SK46]
gi|213950941|gb|EEB62345.1| DNA or RNA helicase of superfamily II [Corynebacterium amycolatum
SK46]
Length = 567
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + G SGV+VLPCGAGK++VG A ++ L+L + V
Sbjct: 190 LRDYQRMAADSFREGG---SGVVVLPCGAGKTIVGAAAMVDAQRTTLILVTNTV 240
>gi|410669783|ref|YP_006922154.1| DNA repair helicase [Methanolobus psychrophilus R15]
gi|409168911|gb|AFV22786.1| DNA repair helicase [Methanolobus psychrophilus R15]
Length = 446
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 4 DLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+LK + LR YQ+KS+ N + GVIVLP G+GK++VG+ A + +V+
Sbjct: 64 ELKSTIELRGYQQKSIDAWIQN--SNRGVIVLPTGSGKTVVGINAISLLNTPTIVI 117
>gi|114047927|ref|YP_738477.1| type III restriction enzyme, res subunit [Shewanella sp. MR-7]
gi|113889369|gb|ABI43420.1| type III restriction enzyme, res subunit [Shewanella sp. MR-7]
Length = 590
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALV 58
M+++ PS LR YQ++++ + + S V+VLP GAGKS+V R R LV
Sbjct: 1 MSVNSNPSVTLRDYQQQAVDAAIAHFKKSNDSAVLVLPTGAGKSIVIAELARIARGRVLV 60
Query: 59 L 59
L
Sbjct: 61 L 61
>gi|117920967|ref|YP_870159.1| type III restriction enzyme, res subunit [Shewanella sp. ANA-3]
gi|117613299|gb|ABK48753.1| type III restriction enzyme, res subunit [Shewanella sp. ANA-3]
Length = 590
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALV 58
M+++ PS LR YQ++++ + + S V+VLP GAGKS+V R R LV
Sbjct: 1 MSVNSNPSVTLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLV 60
Query: 59 L 59
L
Sbjct: 61 L 61
>gi|453379441|dbj|GAC85763.1| putative ATP-dependent DNA helicase [Gordonia paraffinivorans NBRC
108238]
Length = 561
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 182 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTV 232
>gi|443674395|ref|ZP_21139427.1| putative ATP-dependent DNA helicase [Rhodococcus sp. AW25M09]
gi|443413022|emb|CCQ17766.1| putative ATP-dependent DNA helicase [Rhodococcus sp. AW25M09]
Length = 551
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 184 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMARAKATTLILVTNTV 234
>gi|432335750|ref|ZP_19587311.1| DNA repair helicase, partial [Rhodococcus wratislaviensis IFP 2016]
gi|430777326|gb|ELB92688.1| DNA repair helicase, partial [Rhodococcus wratislaviensis IFP 2016]
Length = 537
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 191 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 241
>gi|384106694|ref|ZP_10007601.1| DNA repair helicase [Rhodococcus imtechensis RKJ300]
gi|383834030|gb|EID73480.1| DNA repair helicase [Rhodococcus imtechensis RKJ300]
Length = 559
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 191 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 241
>gi|113970698|ref|YP_734491.1| type III restriction enzyme, res subunit [Shewanella sp. MR-4]
gi|113885382|gb|ABI39434.1| type III restriction enzyme, res subunit [Shewanella sp. MR-4]
Length = 590
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALV 58
M+++ PS LR YQ++++ + + S V+VLP GAGKS+V R R LV
Sbjct: 1 MSVNSSPSVTLRDYQQQAVDAAIAHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLV 60
Query: 59 L 59
L
Sbjct: 61 L 61
>gi|453074363|ref|ZP_21977157.1| DNA repair helicase [Rhodococcus triatomae BKS 15-14]
gi|452764769|gb|EME23035.1| DNA repair helicase [Rhodococcus triatomae BKS 15-14]
Length = 559
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 191 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 241
>gi|397735054|ref|ZP_10501757.1| type III restriction enzyme, res subunit [Rhodococcus sp. JVH1]
gi|396929279|gb|EJI96485.1| type III restriction enzyme, res subunit [Rhodococcus sp. JVH1]
Length = 559
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 191 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 241
>gi|379706890|ref|YP_005262095.1| putative DNA helicase [Nocardia cyriacigeorgica GUH-2]
gi|374844389|emb|CCF61451.1| putative DNA helicase [Nocardia cyriacigeorgica GUH-2]
Length = 552
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 184 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMARAKATTLILVTNTV 234
>gi|374607824|ref|ZP_09680624.1| type III restriction protein res subunit [Mycobacterium tusciae
JS617]
gi|373554386|gb|EHP80965.1| type III restriction protein res subunit [Mycobacterium tusciae
JS617]
Length = 552
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 185 LRDYQEMATDSFWQGG---SGVVVLPCGAGKTLVGAAAMAKASATTLILVTNTV 235
>gi|419962442|ref|ZP_14478434.1| DNA repair helicase [Rhodococcus opacus M213]
gi|424854109|ref|ZP_18278467.1| DNA repair helicase [Rhodococcus opacus PD630]
gi|356664156|gb|EHI44249.1| DNA repair helicase [Rhodococcus opacus PD630]
gi|414572195|gb|EKT82896.1| DNA repair helicase [Rhodococcus opacus M213]
Length = 559
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 191 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 241
>gi|226364428|ref|YP_002782210.1| ATP-dependent DNA helicase [Rhodococcus opacus B4]
gi|226242917|dbj|BAH53265.1| putative ATP-dependent DNA helicase [Rhodococcus opacus B4]
Length = 559
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 191 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 241
>gi|54022596|ref|YP_116838.1| DNA helicase [Nocardia farcinica IFM 10152]
gi|54014104|dbj|BAD55474.1| putative DNA helicase [Nocardia farcinica IFM 10152]
Length = 552
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 184 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 234
>gi|111021918|ref|YP_704890.1| DNA repair helicase [Rhodococcus jostii RHA1]
gi|110821448|gb|ABG96732.1| probable DNA repair helicase [Rhodococcus jostii RHA1]
Length = 584
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 216 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 266
>gi|48478394|ref|YP_024100.1| DNA repair helicase [Picrophilus torridus DSM 9790]
gi|48431042|gb|AAT43907.1| DNA repair helicase [Picrophilus torridus DSM 9790]
Length = 443
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 2 TIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
++D+ LRPYQ KS+ N +GVIVLP AGK+++G+ A ++ LV+
Sbjct: 54 SLDINADINLRPYQIKSIEMWAKNDY--NGVIVLPTAAGKTMIGIYAINMLKTTTLVI 109
>gi|384567607|ref|ZP_10014711.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
gi|384523461|gb|EIF00657.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
Length = 548
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ + G SGV+VLPCGAGK+LVG A R L+L + V
Sbjct: 182 LRDYQRQAAEAFWSGG---SGVVVLPCGAGKTLVGAAAMARARATTLILVTNTV 232
>gi|312138404|ref|YP_004005740.1| ATP-dependent DNA helicase [Rhodococcus equi 103S]
gi|311887743|emb|CBH47055.1| ATP-dependent DNA helicase [Rhodococcus equi 103S]
Length = 552
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 184 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 234
>gi|325674600|ref|ZP_08154287.1| DNA repair helicase [Rhodococcus equi ATCC 33707]
gi|325554186|gb|EGD23861.1| DNA repair helicase [Rhodococcus equi ATCC 33707]
Length = 552
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 184 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 234
>gi|377564040|ref|ZP_09793368.1| putative ATP-dependent DNA helicase [Gordonia sputi NBRC 100414]
gi|377528930|dbj|GAB38533.1| putative ATP-dependent DNA helicase [Gordonia sputi NBRC 100414]
Length = 558
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 185 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTV 235
>gi|385788833|ref|YP_005819942.1| Putative ATP-dependent helicase [Erwinia sp. Ejp617]
gi|310768105|gb|ADP13055.1| Putative ATP-dependent helicase [Erwinia sp. Ejp617]
Length = 584
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ R A+ VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVNATISYFRRSAQPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|377562511|ref|ZP_09791902.1| putative ATP-dependent DNA helicase [Gordonia otitidis NBRC 100426]
gi|441508856|ref|ZP_20990778.1| putative ATP-dependent DNA helicase [Gordonia aichiensis NBRC
108223]
gi|377520337|dbj|GAB37067.1| putative ATP-dependent DNA helicase [Gordonia otitidis NBRC 100426]
gi|441446861|dbj|GAC48739.1| putative ATP-dependent DNA helicase [Gordonia aichiensis NBRC
108223]
Length = 555
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 182 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTV 232
>gi|359413327|ref|ZP_09205792.1| type III restriction protein res subunit [Clostridium sp. DL-VIII]
gi|357172211|gb|EHJ00386.1| type III restriction protein res subunit [Clostridium sp. DL-VIII]
Length = 556
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
++R YQ+++ + G A+ SGVIVLPCGAGK++ + +++ L+L
Sbjct: 188 LIRDYQKEASDIFYSKGTAKGGSGVIVLPCGAGKTVTAMAVMDKIKEETLIL 239
>gi|374335153|ref|YP_005091840.1| ATP-dependent helicase [Oceanimonas sp. GK1]
gi|372984840|gb|AEY01090.1| ATP-dependent helicase [Oceanimonas sp. GK1]
Length = 579
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R S GV+VLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQQEAVDRTLDYFRRHSEPGVLVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|357012432|ref|ZP_09077431.1| putative ATP-dependent helicase [Paenibacillus elgii B69]
Length = 564
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 11 LRPYQEKSLRKMFGNG--RARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ ++ + G SGV+VLPCGAGK+++G+ A + L+L ++
Sbjct: 189 LREYQRSAVDSFYREGSLHGGSGVLVLPCGAGKTVIGIAAMGKLNCATLILTSN 242
>gi|387607868|ref|YP_006096724.1| putative helicase [Escherichia coli 042]
gi|284922168|emb|CBG35250.1| putative helicase [Escherichia coli 042]
Length = 586
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ M + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDAMLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|24374285|ref|NP_718328.1| helicase [Shewanella oneidensis MR-1]
gi|24348820|gb|AAN55772.1|AE015713_5 helicase [Shewanella oneidensis MR-1]
Length = 590
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALV 58
M+++ PS +LR YQ++++ + + S V+VLP GAGKS+V R R LV
Sbjct: 1 MSVNSSPSVILRDYQQQAVDAAIVHFKKSTDSAVLVLPTGAGKSIVIAELARIARGRVLV 60
Query: 59 L 59
L
Sbjct: 61 L 61
>gi|392400142|ref|YP_006436742.1| UvrABC system protein B [Corynebacterium pseudotuberculosis Cp162]
gi|390531220|gb|AFM06949.1| UvrABC system protein B [Corynebacterium pseudotuberculosis Cp162]
Length = 549
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQRMAADSFWEGG---SGVVVLPCGAGKTMVGAASMARAQATTLILVTNTV 236
>gi|386739932|ref|YP_006213112.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 31]
gi|384476626|gb|AFH90422.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 31]
Length = 549
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQRMAADSFWEGG---SGVVVLPCGAGKTMVGAASMARAQATTLILVTNTV 236
>gi|379714872|ref|YP_005303209.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 316]
gi|387138191|ref|YP_005694170.1| UvrABC system protein B [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387140207|ref|YP_005696185.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 1/06-A]
gi|389849940|ref|YP_006352175.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 258]
gi|349734669|gb|AEQ06147.1| UvrABC system protein B [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355391998|gb|AER68663.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 1/06-A]
gi|377653578|gb|AFB71927.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 316]
gi|388247246|gb|AFK16237.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 258]
Length = 549
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQRMAADSFWEGG---SGVVVLPCGAGKTMVGAASMARAQATTLILVTNTV 236
>gi|384504192|ref|YP_005680862.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 1002]
gi|302330291|gb|ADL20485.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 1002]
Length = 549
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQRMAADSFWEGG---SGVVVLPCGAGKTMVGAASMARAQATTLILVTNTV 236
>gi|300858010|ref|YP_003782993.1| hypothetical protein cpfrc_00592 [Corynebacterium
pseudotuberculosis FRC41]
gi|375288177|ref|YP_005122718.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 3/99-5]
gi|383313771|ref|YP_005374626.1| UvrABC system protein B [Corynebacterium pseudotuberculosis P54B96]
gi|384506284|ref|YP_005682953.1| UvrABC system protein B [Corynebacterium pseudotuberculosis C231]
gi|384508373|ref|YP_005685041.1| UvrABC system protein B [Corynebacterium pseudotuberculosis I19]
gi|384510465|ref|YP_005690043.1| UvrABC system protein B [Corynebacterium pseudotuberculosis PAT10]
gi|385807048|ref|YP_005843445.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 267]
gi|387136132|ref|YP_005692112.1| UvrABC system protein B [Corynebacterium pseudotuberculosis
42/02-A]
gi|300685464|gb|ADK28386.1| hypothetical protein cpfrc_00592 [Corynebacterium
pseudotuberculosis FRC41]
gi|302205735|gb|ADL10077.1| UvrABC system protein B [Corynebacterium pseudotuberculosis C231]
gi|308275971|gb|ADO25870.1| UvrABC system protein B [Corynebacterium pseudotuberculosis I19]
gi|341824404|gb|AEK91925.1| UvrABC system protein B [Corynebacterium pseudotuberculosis PAT10]
gi|348606577|gb|AEP69850.1| UvrABC system protein B [Corynebacterium pseudotuberculosis
42/02-A]
gi|371575466|gb|AEX39069.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 3/99-5]
gi|380869272|gb|AFF21746.1| UvrABC system protein B [Corynebacterium pseudotuberculosis P54B96]
gi|383804441|gb|AFH51520.1| UvrABC system protein B [Corynebacterium pseudotuberculosis 267]
Length = 549
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 186 LRDYQRMAADSFWEGG---SGVVVLPCGAGKTMVGAASMARAQATTLILVTNTV 236
>gi|13541404|ref|NP_111092.1| DNA helicase [Thermoplasma volcanium GSS1]
gi|14324787|dbj|BAB59714.1| DNA helicase [Thermoplasma volcanium GSS1]
Length = 455
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
I++K + LRPYQ +L K + + R G IVLP AGK+ +G+ A +K+ ++L
Sbjct: 65 IEVKANIKLRPYQSDALDK-WASSNMR-GTIVLPTAAGKTHIGIEAINRTKKKTIIL 119
>gi|119718166|ref|YP_925131.1| helicase domain-containing protein [Nocardioides sp. JS614]
gi|119538827|gb|ABL83444.1| helicase domain protein [Nocardioides sp. JS614]
Length = 546
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRAYQREAAESFWHGG---SGVVVLPCGAGKTLVGAAAMAEAQATTLILVTNTV 232
>gi|385773208|ref|YP_005645774.1| nucleotide excision repair helicase, Xpb1 [Sulfolobus islandicus
HVE10/4]
gi|385775842|ref|YP_005648410.1| nucleotide excision repair helicase, Xpb1 [Sulfolobus islandicus
REY15A]
gi|323474590|gb|ADX85196.1| nucleotide excision repair helicase, Xpb1 [Sulfolobus islandicus
REY15A]
gi|323477322|gb|ADX82560.1| nucleotide excision repair helicase, Xpb1 [Sulfolobus islandicus
HVE10/4]
Length = 560
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ +++ NG GVI LP GAGK++VG+ +RK L++
Sbjct: 164 LREYQREAIENWIKNGN--RGVIALPTGAGKTVVGIKGIDVIRKPTLIV 210
>gi|229579041|ref|YP_002837439.1| type III restriction protein res subunit [Sulfolobus islandicus
Y.G.57.14]
gi|228009755|gb|ACP45517.1| type III restriction protein res subunit [Sulfolobus islandicus
Y.G.57.14]
Length = 560
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ +++ NG GVI LP GAGK++VG+ +RK L++
Sbjct: 164 LREYQREAIENWIKNGN--RGVIALPTGAGKTVVGIKGIDVIRKPTLIV 210
>gi|227827539|ref|YP_002829319.1| type III restriction protein res subunit [Sulfolobus islandicus
M.14.25]
gi|238619696|ref|YP_002914522.1| type III restriction protein res subunit [Sulfolobus islandicus
M.16.4]
gi|227459335|gb|ACP38021.1| type III restriction protein res subunit [Sulfolobus islandicus
M.14.25]
gi|238380766|gb|ACR41854.1| type III restriction protein res subunit [Sulfolobus islandicus
M.16.4]
Length = 560
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ +++ NG GVI LP GAGK++VG+ +RK L++
Sbjct: 164 LREYQREAIENWIKNGN--RGVIALPTGAGKTVVGIKGIDVIRKPTLIV 210
>gi|227830226|ref|YP_002832006.1| type III restriction protein res subunit [Sulfolobus islandicus
L.S.2.15]
gi|284997649|ref|YP_003419416.1| type III restriction enzyme, res subunit [Sulfolobus islandicus
L.D.8.5]
gi|227456674|gb|ACP35361.1| type III restriction protein res subunit [Sulfolobus islandicus
L.S.2.15]
gi|284445544|gb|ADB87046.1| type III restriction enzyme, res subunit [Sulfolobus islandicus
L.D.8.5]
Length = 560
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ +++ NG GVI LP GAGK++VG+ +RK L++
Sbjct: 164 LREYQREAIENWIKNGN--RGVIALPTGAGKTVVGIKGIDVIRKPTLIV 210
>gi|407641888|ref|YP_006805647.1| putative DNA helicase [Nocardia brasiliensis ATCC 700358]
gi|407304772|gb|AFT98672.1| putative DNA helicase [Nocardia brasiliensis ATCC 700358]
Length = 545
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 177 LRDYQELAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 227
>gi|320538234|ref|ZP_08038123.1| type III restriction enzyme, res subunit [Treponema phagedenis
F0421]
gi|320144916|gb|EFW36643.1| type III restriction enzyme, res subunit [Treponema phagedenis
F0421]
Length = 562
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
+LR YQ+++ G+ A +G IVLPCGAGK++VG+ ++ L+L
Sbjct: 193 ILRDYQKEAASSFVGDKSAGTGFGTIVLPCGAGKTVVGMLVMSMLQTDTLIL 244
>gi|15897838|ref|NP_342443.1| DNA repair protein rad25 [Sulfolobus solfataricus P2]
gi|284175645|ref|ZP_06389614.1| DNA repair protein rad25 [Sulfolobus solfataricus 98/2]
gi|384434390|ref|YP_005643748.1| type III restriction protein res subunit [Sulfolobus solfataricus
98/2]
gi|13814139|gb|AAK41233.1| DNA repair protein rad25 [Sulfolobus solfataricus P2]
gi|261602544|gb|ACX92147.1| type III restriction protein res subunit [Sulfolobus solfataricus
98/2]
Length = 551
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ +++ NG GVI LP GAGK++VG+ +RK L++
Sbjct: 164 LREYQREAIENWIKNGN--KGVIALPTGAGKTVVGIKGIDIIRKPTLIV 210
>gi|383830141|ref|ZP_09985230.1| DNA/RNA helicase, superfamily II [Saccharomonospora xinjiangensis
XJ-54]
gi|383462794|gb|EID54884.1| DNA/RNA helicase, superfamily II [Saccharomonospora xinjiangensis
XJ-54]
Length = 548
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQRQAADAFWAGG---SGVVVLPCGAGKTLVGAAAMARAQATTLILVTNTV 232
>gi|375097404|ref|ZP_09743669.1| DNA/RNA helicase, superfamily II [Saccharomonospora marina XMU15]
gi|374658137|gb|EHR52970.1| DNA/RNA helicase, superfamily II [Saccharomonospora marina XMU15]
Length = 548
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRGYQRDAAQAFWAGG---SGVVVLPCGAGKTLVGAAAMAQAQATTLILVTNTV 232
>gi|453362685|dbj|GAC81440.1| putative ATP-dependent DNA helicase [Gordonia malaquae NBRC 108250]
Length = 544
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A L+L + V
Sbjct: 182 LRDYQELAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAAATTLILVTNTV 232
>gi|257057395|ref|YP_003135227.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
gi|256587267|gb|ACU98400.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
Length = 548
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQRQAADAFWAGG---SGVVVLPCGAGKTLVGAAAMAQAQATTLILVTNTV 232
>gi|398792762|ref|ZP_10553323.1| DNA/RNA helicase, superfamily II [Pantoea sp. YR343]
gi|398212459|gb|EJM99067.1| DNA/RNA helicase, superfamily II [Pantoea sp. YR343]
Length = 626
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ + R A VIVLP GAGKSLV R R LVL +
Sbjct: 44 SFTLRPYQQEAVDATLNHFRRHATPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 99
>gi|418419027|ref|ZP_12992212.1| DNA helicase [Mycobacterium abscessus subsp. bolletii BD]
gi|364002200|gb|EHM23392.1| DNA helicase [Mycobacterium abscessus subsp. bolletii BD]
Length = 550
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQQMAADSFWAGG---SGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNTV 232
>gi|169627959|ref|YP_001701608.1| DNA helicase [Mycobacterium abscessus ATCC 19977]
gi|365868780|ref|ZP_09408329.1| DNA helicase [Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|414584053|ref|ZP_11441193.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-1215]
gi|418250922|ref|ZP_12877134.1| DNA helicase [Mycobacterium abscessus 47J26]
gi|419710724|ref|ZP_14238189.1| DNA helicase [Mycobacterium abscessus M93]
gi|419714657|ref|ZP_14242071.1| DNA helicase [Mycobacterium abscessus M94]
gi|420862860|ref|ZP_15326254.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0303]
gi|420867257|ref|ZP_15330643.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0726-RA]
gi|420871691|ref|ZP_15335071.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0726-RB]
gi|420881318|ref|ZP_15344685.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0304]
gi|420881914|ref|ZP_15345278.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0421]
gi|420887751|ref|ZP_15351107.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0422]
gi|420893040|ref|ZP_15356383.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0708]
gi|420902683|ref|ZP_15366014.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0817]
gi|420903476|ref|ZP_15366799.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-1212]
gi|420913517|ref|ZP_15376829.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0125-R]
gi|420914723|ref|ZP_15378029.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0125-S]
gi|420920523|ref|ZP_15383820.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0728-S]
gi|420925608|ref|ZP_15388896.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-1108]
gi|420930047|ref|ZP_15393324.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 1S-151-0930]
gi|420938886|ref|ZP_15402155.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 1S-152-0914]
gi|420940295|ref|ZP_15403560.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 1S-153-0915]
gi|420945886|ref|ZP_15409139.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 1S-154-0310]
gi|420950472|ref|ZP_15413718.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0626]
gi|420954640|ref|ZP_15417880.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0107]
gi|420960178|ref|ZP_15423408.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-1231]
gi|420965152|ref|ZP_15428368.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0810-R]
gi|420970428|ref|ZP_15433628.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0921]
gi|420975958|ref|ZP_15439143.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0212]
gi|420981334|ref|ZP_15444507.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0728-R]
gi|420985956|ref|ZP_15449119.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0206]
gi|420990622|ref|ZP_15453775.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0307]
gi|420996443|ref|ZP_15459584.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0912-R]
gi|421000872|ref|ZP_15464005.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0912-S]
gi|421005871|ref|ZP_15468987.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0119-R]
gi|421011380|ref|ZP_15474478.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0122-R]
gi|421016200|ref|ZP_15479269.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0122-S]
gi|421021800|ref|ZP_15484851.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0731]
gi|421027459|ref|ZP_15490498.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0930-R]
gi|421032529|ref|ZP_15495553.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0930-S]
gi|421038231|ref|ZP_15501242.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0116-R]
gi|421046892|ref|ZP_15509892.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0116-S]
gi|421047622|ref|ZP_15510618.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|169239926|emb|CAM60954.1| Probable DNA helicase [Mycobacterium abscessus]
gi|353449547|gb|EHB97944.1| DNA helicase [Mycobacterium abscessus 47J26]
gi|363999710|gb|EHM20912.1| DNA helicase [Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|382940723|gb|EIC65046.1| DNA helicase [Mycobacterium abscessus M93]
gi|382945347|gb|EIC69643.1| DNA helicase [Mycobacterium abscessus M94]
gi|392074380|gb|EIU00217.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0726-RA]
gi|392074534|gb|EIU00370.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0303]
gi|392075880|gb|EIU01713.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0726-RB]
gi|392086227|gb|EIU12052.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0304]
gi|392090969|gb|EIU16780.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0421]
gi|392093358|gb|EIU19156.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0422]
gi|392100044|gb|EIU25838.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0817]
gi|392106804|gb|EIU32588.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0708]
gi|392110021|gb|EIU35794.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-1212]
gi|392115511|gb|EIU41280.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0125-R]
gi|392119205|gb|EIU44973.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-1215]
gi|392124797|gb|EIU50556.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0125-S]
gi|392130359|gb|EIU56105.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0728-S]
gi|392140159|gb|EIU65889.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 1S-151-0930]
gi|392140683|gb|EIU66410.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-1108]
gi|392144401|gb|EIU70126.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 1S-152-0914]
gi|392156727|gb|EIU82427.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 1S-153-0915]
gi|392159094|gb|EIU84790.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 1S-154-0310]
gi|392160249|gb|EIU85940.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0626]
gi|392173038|gb|EIU98707.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0212]
gi|392174857|gb|EIV00522.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 5S-0921]
gi|392177132|gb|EIV02790.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 6G-0728-R]
gi|392188760|gb|EIV14395.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0206]
gi|392190644|gb|EIV16274.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0912-R]
gi|392190807|gb|EIV16435.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0307]
gi|392203026|gb|EIV28622.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0912-S]
gi|392203341|gb|EIV28935.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0119-R]
gi|392212690|gb|EIV38250.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0122-R]
gi|392216822|gb|EIV42361.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0122-S]
gi|392217370|gb|EIV42908.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0731]
gi|392226445|gb|EIV51959.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0116-R]
gi|392232116|gb|EIV57619.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0930-S]
gi|392233419|gb|EIV58918.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0930-R]
gi|392236345|gb|EIV61843.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 4S-0116-S]
gi|392241787|gb|EIV67274.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense CCUG 48898]
gi|392256246|gb|EIV81705.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-1231]
gi|392256433|gb|EIV81890.1| putative DNA HELICASE ERCC3 [Mycobacterium massiliense 2B-0107]
gi|392258131|gb|EIV83578.1| putative DNA HELICASE ERCC3 [Mycobacterium abscessus 3A-0810-R]
Length = 550
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQQMAADSFWAGG---SGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNTV 232
>gi|352682038|ref|YP_004892562.1| DNA repair helicase RAD25 [Thermoproteus tenax Kra 1]
gi|350274837|emb|CCC81483.1| DNA repair helicase RAD25 [Thermoproteus tenax Kra 1]
Length = 452
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 6 KPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+PS LRPYQE++L+ R + GVI +P GAGK+ V + A + LV+
Sbjct: 75 RPS--LRPYQEEALKSWL---RHKRGVITMPTGAGKTYVAIGAIAELSVSTLVV 123
>gi|443492737|ref|YP_007370884.1| DNA helicase Ercc3 [Mycobacterium liflandii 128FXT]
gi|442585234|gb|AGC64377.1| DNA helicase Ercc3 [Mycobacterium liflandii 128FXT]
Length = 549
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
I L+P LR YQ+ + + G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 173 ISLQPDGWELRDYQQLATDSFWAGG---SGVVVLPCGAGKTLVGAAAMAKAQATTLIL 227
>gi|183984638|ref|YP_001852929.1| DNA helicase Ercc3 [Mycobacterium marinum M]
gi|183177964|gb|ACC43074.1| DNA helicase Ercc3 [Mycobacterium marinum M]
Length = 549
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
I L+P LR YQ+ + + G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 173 ISLQPDGWELRDYQQLATDSFWAGG---SGVVVLPCGAGKTLVGAAAMAKAQATTLIL 227
>gi|118616163|ref|YP_904495.1| DNA helicase Ercc3 [Mycobacterium ulcerans Agy99]
gi|118568273|gb|ABL03024.1| DNA helicase Ercc3 [Mycobacterium ulcerans Agy99]
Length = 542
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 3 IDLKPSA-VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
I L+P LR YQ+ + + G SGV+VLPCGAGK+LVG A + L+L
Sbjct: 166 ISLQPDGWELRDYQQLATDSFWAGG---SGVVVLPCGAGKTLVGAAAMAKAQATTLIL 220
>gi|359396222|ref|ZP_09189274.1| hypothetical protein KUC_2896 [Halomonas boliviensis LC1]
gi|357970487|gb|EHJ92934.1| hypothetical protein KUC_2896 [Halomonas boliviensis LC1]
Length = 603
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ+++++++ + RA S ++VLP G+GKSLV R R LVL +
Sbjct: 23 LRPYQQEAVKRVVVHFRASSEPALVVLPTGSGKSLVIAELARLARGRVLVLAH 75
>gi|387888646|ref|YP_006318944.1| putative helicase YejH [Escherichia blattae DSM 4481]
gi|414592713|ref|ZP_11442362.1| hypothetical protein YejH [Escherichia blattae NBRC 105725]
gi|386923479|gb|AFJ46433.1| putative helicase YejH [Escherichia blattae DSM 4481]
gi|403196194|dbj|GAB80014.1| hypothetical protein YejH [Escherichia blattae NBRC 105725]
Length = 586
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ G R VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATVGYFRTHETPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|296118323|ref|ZP_06836904.1| putative ATP-dependent DNA helicase [Corynebacterium ammoniagenes
DSM 20306]
gi|295968881|gb|EFG82125.1| putative ATP-dependent DNA helicase [Corynebacterium ammoniagenes
DSM 20306]
Length = 543
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 181 LRDYQEYATESFWEGG---SGVVVLPCGAGKTIVGAAAMAKAQATTLILVTNTV 231
>gi|357021039|ref|ZP_09083270.1| DNA or RNA helicase of superfamily protein II [Mycobacterium
thermoresistibile ATCC 19527]
gi|356478787|gb|EHI11924.1| DNA or RNA helicase of superfamily protein II [Mycobacterium
thermoresistibile ATCC 19527]
Length = 549
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQQMAADSFWSGG---SGVVVLPCGAGKTLVGAAAMAKAEATTLILVTNTV 232
>gi|384108565|ref|ZP_10009458.1| DNA or RNA helicases of superfamily II [Treponema sp. JC4]
gi|383869952|gb|EID85558.1| DNA or RNA helicases of superfamily II [Treponema sp. JC4]
Length = 594
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
V+R YQ + R + G+ +G IVLPCGAGK++VG+T ++ L++
Sbjct: 223 VIREYQRGAARALVGDKGPGTGFGTIVLPCGAGKTVVGMTIMDMLKTSTLII 274
>gi|310642758|ref|YP_003947516.1| DNA or RNA helicase of superfamily ii [Paenibacillus polymyxa SC2]
gi|386041839|ref|YP_005960793.1| tFIIH basal transcription factor complex helicase XPB subunit DNA
excision repair protein ERCC-3 [Paenibacillus polymyxa
M1]
gi|309247708|gb|ADO57275.1| DNA or RNA helicase of superfamily II [Paenibacillus polymyxa SC2]
gi|343097877|emb|CCC86086.1| tFIIH basal transcription factor complex helicase XPB subunit DNA
excision repair protein ERCC-3 [Paenibacillus polymyxa
M1]
Length = 607
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 11 LRPYQEKSLRKMFG-NGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ K+ G +G SGV+VLPCGAGK+++G+ ++ L+L ++ +
Sbjct: 220 LRDYQVKAADAFEGTDGLGGSGVLVLPCGAGKTVIGMAVMNRLQCEVLILTSNTI 274
>gi|423208946|ref|ZP_17195500.1| hypothetical protein HMPREF1169_01018 [Aeromonas veronii AER397]
gi|404618791|gb|EKB15711.1| hypothetical protein HMPREF1169_01018 [Aeromonas veronii AER397]
Length = 593
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
P VLRPYQ ++ + + R V+VLP GAGKSLV R R LVL +
Sbjct: 7 PMFVLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAH 63
>gi|423202243|ref|ZP_17188822.1| hypothetical protein HMPREF1167_02405 [Aeromonas veronii AER39]
gi|404615395|gb|EKB12367.1| hypothetical protein HMPREF1167_02405 [Aeromonas veronii AER39]
Length = 593
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
P VLRPYQ ++ + + R V+VLP GAGKSLV R R LVL +
Sbjct: 7 PMFVLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAH 63
>gi|330830380|ref|YP_004393332.1| putative helicase, ATP-dependent [Aeromonas veronii B565]
gi|328805516|gb|AEB50715.1| Putative helicase, ATP-dependent [Aeromonas veronii B565]
Length = 608
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
P VLRPYQ ++ + + R V+VLP GAGKSLV R R LVL +
Sbjct: 22 PMFVLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAH 78
>gi|229584742|ref|YP_002843244.1| type III restriction protein res subunit [Sulfolobus islandicus
M.16.27]
gi|228019792|gb|ACP55199.1| type III restriction protein res subunit [Sulfolobus islandicus
M.16.27]
Length = 560
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ +++ NG GVI LP GAGK++VG+ +RK L++
Sbjct: 164 LREYQREAIENWIKNGD--RGVIALPTGAGKTVVGIKGIDVIRKPTLIV 210
>gi|300790353|ref|YP_003770644.1| DNA excision repair protein [Amycolatopsis mediterranei U32]
gi|384153882|ref|YP_005536698.1| DNA excision repair protein [Amycolatopsis mediterranei S699]
gi|399542231|ref|YP_006554893.1| DNA excision repair protein [Amycolatopsis mediterranei S699]
gi|299799867|gb|ADJ50242.1| DNA excision repair protein [Amycolatopsis mediterranei U32]
gi|340532036|gb|AEK47241.1| DNA excision repair protein [Amycolatopsis mediterranei S699]
gi|398323001|gb|AFO81948.1| DNA excision repair protein [Amycolatopsis mediterranei S699]
Length = 548
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK+LVG A + L+L + V
Sbjct: 182 LRDYQRMAAEAFWAGG---SGVVVLPCGAGKTLVGAAAMARAQATTLILVTNTV 232
>gi|417540454|ref|ZP_12192481.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|353662670|gb|EHD01594.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
Length = 586
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R+R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARRRVLVLAH 57
>gi|238757899|ref|ZP_04619081.1| hypothetical protein yaldo0001_20880 [Yersinia aldovae ATCC
35236]
gi|238703884|gb|EEP96419.1| hypothetical protein yaldo0001_20880 [Yersinia aldovae ATCC
35236]
Length = 615
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R A +IVLP GAGKSLV R R LVL +
Sbjct: 35 LRPYQQEAVEATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 87
>gi|188533403|ref|YP_001907200.1| ATP-dependent helicase [Erwinia tasmaniensis Et1/99]
gi|188028445|emb|CAO96307.1| Putative ATP-dependent helicase [Erwinia tasmaniensis Et1/99]
Length = 584
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ + R + VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATISHFRRYTQPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|307544263|ref|YP_003896742.1| helicase [Halomonas elongata DSM 2581]
gi|307216287|emb|CBV41557.1| putative helicase [Halomonas elongata DSM 2581]
Length = 600
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRA--RSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ +++R++ + RA V+VLP G+GKSLV R R LVL +
Sbjct: 9 LRPYQNEAVRRVIEHFRACHDPAVVVLPTGSGKSLVIAELARLARGRVLVLAH 61
>gi|421871952|ref|ZP_16303572.1| type III restriction enzyme, res subunit [Brevibacillus
laterosporus GI-9]
gi|372459209|emb|CCF13121.1| type III restriction enzyme, res subunit [Brevibacillus
laterosporus GI-9]
Length = 563
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGV 46
LR YQ ++ + NG A SGV+ LPCGAGK+++G+
Sbjct: 189 LRDYQLAAVDAFYANGTAYGGSGVLCLPCGAGKTIIGI 226
>gi|339011047|ref|ZP_08643615.1| putative ATP-dependent helicase [Brevibacillus laterosporus LMG
15441]
gi|338772035|gb|EGP31570.1| putative ATP-dependent helicase [Brevibacillus laterosporus LMG
15441]
Length = 563
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGV 46
LR YQ ++ + NG A SGV+ LPCGAGK+++G+
Sbjct: 189 LRDYQLAAVDAFYANGTAYGGSGVLCLPCGAGKTIIGI 226
>gi|126465860|ref|YP_001040969.1| DNA repair helicase RAD25 [Staphylothermus marinus F1]
gi|126014683|gb|ABN70061.1| DNA repair helicase RAD25 [Staphylothermus marinus F1]
Length = 548
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ ++L N G++ LP G+GK+L+G+ A R L++
Sbjct: 168 LRPYQREALEAWIKNNG--KGIVALPTGSGKTLIGIAAIAQTSLRTLII 214
>gi|89093643|ref|ZP_01166590.1| putative ATP-dependent helicase [Neptuniibacter caesariensis]
gi|89082039|gb|EAR61264.1| putative ATP-dependent helicase [Oceanospirillum sp. MED92]
Length = 584
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ++++ + R ++ VIVLP GAGKSLV RK+ +VL
Sbjct: 7 LRPYQQEAVDATLAHFRKKNDPAVIVLPTGAGKSLVIAELARLARKKIMVL 57
>gi|308126486|ref|ZP_07663782.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio
parahaemolyticus AQ4037]
gi|308109095|gb|EFO46635.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio
parahaemolyticus AQ4037]
Length = 131
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|409358860|ref|ZP_11237219.1| ATP-dependent DNA helicase [Dietzia alimentaria 72]
Length = 555
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 184 LRDYQQMATDSFWAGG---SGVVVLPCGAGKTMVGAAAMARAKATTLILVTNTV 234
>gi|387815285|ref|YP_005430775.1| helicase [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381340305|emb|CCG96352.1| putative yejH(yejI, yejJ), an ATP-dependent helicase with
nucleoside triP hydrolase domain [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 585
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRA--RSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ++++ + R S VIVLP GAGKSLV R++ LVL
Sbjct: 7 LRPYQQEAVDATLNHFRKSDESAVIVLPTGAGKSLVIAELARLARRKILVL 57
>gi|120555869|ref|YP_960220.1| type III restriction enzyme, res subunit [Marinobacter aquaeolei
VT8]
gi|120325718|gb|ABM20033.1| type III restriction enzyme, res subunit [Marinobacter aquaeolei
VT8]
Length = 585
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRA--RSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ++++ + R S VIVLP GAGKSLV R++ LVL
Sbjct: 7 LRPYQQEAVDATLNHFRKSDESAVIVLPTGAGKSLVIAELARLARRKILVL 57
>gi|336324883|ref|YP_004604849.1| ATP-dependent DNA helicase [Corynebacterium resistens DSM 45100]
gi|336100865|gb|AEI08685.1| ATP-dependent DNA helicase [Corynebacterium resistens DSM 45100]
Length = 552
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 189 LRDYQEMAADSFWEGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 239
>gi|296169623|ref|ZP_06851243.1| DNA or RNA helicase of superfamily protein II [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295895889|gb|EFG75584.1| DNA or RNA helicase of superfamily protein II [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 549
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQQMATDSFWSGG---SGVVVLPCGAGKTLVGAAAMAKASATTLILVTNVV 232
>gi|319948963|ref|ZP_08023067.1| ATP-dependent DNA helicase [Dietzia cinnamea P4]
gi|319437368|gb|EFV92384.1| ATP-dependent DNA helicase [Dietzia cinnamea P4]
Length = 555
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 184 LRDYQQMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 234
>gi|213620820|ref|ZP_03373603.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
Length = 77
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|422334351|ref|ZP_16415358.1| hypothetical protein HMPREF0986_03852, partial [Escherichia coli
4_1_47FAA]
gi|373244577|gb|EHP64058.1| hypothetical protein HMPREF0986_03852, partial [Escherichia coli
4_1_47FAA]
Length = 181
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|358446589|ref|ZP_09157133.1| putative ATP-dependent helicase [Corynebacterium casei UCMA 3821]
gi|356607393|emb|CCE55475.1| putative ATP-dependent helicase [Corynebacterium casei UCMA 3821]
Length = 543
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 181 LRDYQEYATDSFWEGG---SGVVVLPCGAGKTIVGAAAMAKAKATTLILVTNTV 231
>gi|312880393|ref|ZP_07740193.1| type III restriction protein res subunit [Aminomonas paucivorans
DSM 12260]
gi|310783684|gb|EFQ24082.1| type III restriction protein res subunit [Aminomonas paucivorans
DSM 12260]
Length = 463
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQE +LR++ G + GV+V PCGAGK+ + R+ A+VLC++
Sbjct: 101 LREYQENALRQVGGRSQ---GVLVAPCGAGKTALLGALVAKRRQPAIVLCHT 149
>gi|229488859|ref|ZP_04382725.1| DNA or RNA helicase of superfamily II [Rhodococcus erythropolis
SK121]
gi|453071394|ref|ZP_21974545.1| ATP-dependent DNA helicase [Rhodococcus qingshengii BKS 20-40]
gi|229324363|gb|EEN90118.1| DNA or RNA helicase of superfamily II [Rhodococcus erythropolis
SK121]
gi|452759438|gb|EME17801.1| ATP-dependent DNA helicase [Rhodococcus qingshengii BKS 20-40]
Length = 552
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 184 LRDYQQMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 234
>gi|226187251|dbj|BAH35355.1| putative ATP-dependent DNA helicase [Rhodococcus erythropolis PR4]
Length = 552
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 184 LRDYQQMAADSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTV 234
>gi|308069695|ref|YP_003871300.1| DNA or RNA helicase of superfamily II [Paenibacillus polymyxa E681]
gi|305858974|gb|ADM70762.1| DNA or RNA helicase of superfamily II [Paenibacillus polymyxa E681]
Length = 607
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 11 LRPYQEKSLRKMFG-NGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQ K+ G +G SGV+VLPCGAGK+++G+ ++ L+L ++
Sbjct: 220 LRDYQVKAADAFEGADGLGGSGVLVLPCGAGKTVIGMAVMNRLQCEVLILTSN 272
>gi|15639371|ref|NP_218820.1| DNA repair helicase, [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025613|ref|YP_001933385.1| DNA repair helicase [Treponema pallidum subsp. pallidum SS14]
gi|378972887|ref|YP_005221491.1| putative DNA repair helicase [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|378973954|ref|YP_005222560.1| putative DNA repair helicase [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|378975016|ref|YP_005223624.1| putative DNA repair helicase [Treponema pallidum subsp. pallidum
DAL-1]
gi|378981863|ref|YP_005230168.1| putative DNA repair helicase [Treponema pallidum subsp. pertenue
str. CDC2]
gi|384421904|ref|YP_005631263.1| DNA or RNA helicase of superfamily II [Treponema pallidum subsp.
pallidum str. Chicago]
gi|408502258|ref|YP_006869702.1| putative DNA repair helicase [Treponema pallidum subsp. pallidum
str. Mexico A]
gi|3322660|gb|AAC65366.1| DNA repair helicase, putative [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018188|gb|ACD70806.1| possible DNA repair helicase [Treponema pallidum subsp. pallidum
SS14]
gi|291059770|gb|ADD72505.1| DNA or RNA helicase of superfamily II [Treponema pallidum subsp.
pallidum str. Chicago]
gi|374677210|gb|AEZ57503.1| putative DNA repair helicase [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|374678280|gb|AEZ58572.1| putative DNA repair helicase [Treponema pallidum subsp. pertenue
str. CDC2]
gi|374679349|gb|AEZ59640.1| putative DNA repair helicase [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|374680414|gb|AEZ60704.1| putative DNA repair helicase [Treponema pallidum subsp. pallidum
DAL-1]
gi|408475621|gb|AFU66386.1| putative DNA repair helicase [Treponema pallidum subsp. pallidum
str. Mexico A]
Length = 606
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
PS V R YQ ++ GN SG V+VLPCGAGK++VG+ ++ L+L
Sbjct: 233 PSFVPRDYQWEAADAFVGNRTQGSGFGVVVLPCGAGKTVVGLLVMGLLQTDTLIL 287
>gi|15921551|ref|NP_377220.1| hypothetical protein ST1287 [Sulfolobus tokodaii str. 7]
gi|15622337|dbj|BAB66329.1| ssDNA-dependent ATPase XPBI [Sulfolobus tokodaii str. 7]
Length = 543
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ++++ G SGVI LP GAGK+++G+ VRK L++
Sbjct: 159 LRDYQKEAVDTWLQRG---SGVIALPTGAGKTVIGIKIITEVRKSTLIV 204
>gi|414576786|ref|ZP_11433968.1| type III restriction enzyme, res subunit [Shigella sonnei
3233-85]
gi|391284539|gb|EIQ43134.1| type III restriction enzyme, res subunit [Shigella sonnei
3233-85]
Length = 189
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|383826946|ref|ZP_09982061.1| hypothetical protein MXEN_18794 [Mycobacterium xenopi RIVM700367]
gi|383331524|gb|EID10020.1| hypothetical protein MXEN_18794 [Mycobacterium xenopi RIVM700367]
Length = 543
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 175 LRDYQRLAAESFWSGG---SGVVVLPCGAGKTLVGAAAMAKASATTLILVTNTV 225
>gi|320101410|ref|YP_004177002.1| DNA repair helicase RAD25 [Desulfurococcus mucosus DSM 2162]
gi|319753762|gb|ADV65520.1| DNA repair helicase RAD25 [Desulfurococcus mucosus DSM 2162]
Length = 561
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 2 TIDLKP---SAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALV 58
T+ +KP + LR YQ ++L K N GVI LP G+GK+L+GV A R+L+
Sbjct: 165 TLQVKPELRNVDLRDYQREALGKWVEN--KHRGVIALPTGSGKTLIGVAALVETGVRSLI 222
Query: 59 L 59
+
Sbjct: 223 V 223
>gi|397164328|ref|ZP_10487783.1| type III restriction enzyme, res subunit [Enterobacter
radicincitans DSM 16656]
gi|396093476|gb|EJI91031.1| type III restriction enzyme, res subunit [Enterobacter
radicincitans DSM 16656]
Length = 586
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ +++ + R A VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQREAVDATLAHFRKHAEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|317129326|ref|YP_004095608.1| type III restriction protein res subunit [Bacillus cellulosilyticus
DSM 2522]
gi|315474274|gb|ADU30877.1| type III restriction protein res subunit [Bacillus cellulosilyticus
DSM 2522]
Length = 553
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFG--NGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ++++ G +G I+LPCG+GK++VG+ +++ L+L
Sbjct: 177 LRPYQKEAVDSFINANGGVEGNGFIILPCGSGKTIVGLGVMDKIKEDTLIL 227
>gi|383821970|ref|ZP_09977203.1| DNA or RNA helicase of superfamily protein II [Mycobacterium phlei
RIVM601174]
gi|383332268|gb|EID10751.1| DNA or RNA helicase of superfamily protein II [Mycobacterium phlei
RIVM601174]
Length = 542
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 175 LRDYQQMATDSFWEGG---SGVVVLPCGAGKTLVGAAAMAKASATTLILVTNTV 225
>gi|70607390|ref|YP_256260.1| hypothetical protein Saci_1657 [Sulfolobus acidocaldarius DSM 639]
gi|449067634|ref|YP_007434716.1| hypothetical protein SacN8_08040 [Sulfolobus acidocaldarius N8]
gi|449069908|ref|YP_007436989.1| hypothetical protein SacRon12I_08050 [Sulfolobus acidocaldarius
Ron12/I]
gi|68568038|gb|AAY80967.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
gi|449036142|gb|AGE71568.1| hypothetical protein SacN8_08040 [Sulfolobus acidocaldarius N8]
gi|449038416|gb|AGE73841.1| hypothetical protein SacRon12I_08050 [Sulfolobus acidocaldarius
Ron12/I]
Length = 443
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ ++++ NG+ G+++ P GAGK++VGV A ++ LV+
Sbjct: 70 LRDYQMEAVKSWLKNGK--RGIVIFPTGAGKTMVGVKAIALLKVSTLVV 116
>gi|213859461|ref|ZP_03385165.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 124
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|422307525|ref|ZP_16394682.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1035(8)]
gi|408619635|gb|EKK92655.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1035(8)]
Length = 594
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKSVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|338706347|ref|YP_004673115.1| putative DNA repair helicase [Treponema paraluiscuniculi Cuniculi
A]
gi|335344408|gb|AEH40324.1| probable DNA repair helicase [Treponema paraluiscuniculi Cuniculi
A]
Length = 606
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 7 PSAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
PS V R YQ ++ GN SG V+VLPCGAGK++VG+ ++ L+L
Sbjct: 233 PSFVPRDYQWEAADAFVGNRTQGSGFGVVVLPCGAGKTVVGLLVMGLLQTDTLIL 287
>gi|213023703|ref|ZP_03338150.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 74
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|134097156|ref|YP_001102817.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338]
gi|291005387|ref|ZP_06563360.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338]
gi|133909779|emb|CAL99891.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338]
Length = 553
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++++ + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQRQAVQAFWAGG---SGVVVLPCGAGKTLVGAAAMAEAGATTLILVTNTV 232
>gi|398799275|ref|ZP_10558567.1| DNA/RNA helicase, superfamily II [Pantoea sp. GM01]
gi|398099143|gb|EJL89415.1| DNA/RNA helicase, superfamily II [Pantoea sp. GM01]
Length = 626
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ + R + VIVLP GAGKSLV R R LVL +
Sbjct: 44 SFTLRPYQQEAVDATLNHFRRHTTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 99
>gi|260898992|ref|ZP_05907433.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio
parahaemolyticus Peru-466]
gi|308088658|gb|EFO38353.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio
parahaemolyticus Peru-466]
Length = 185
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|420259163|ref|ZP_14761880.1| DEAD/DEAH box helicase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404513398|gb|EKA27216.1| DEAD/DEAH box helicase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 585
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R A +IVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|418241820|ref|ZP_12868343.1| putative DEAD box helicase family protein [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433548302|ref|ZP_20504352.1| DNA or RNA helicase of superfamily II [Yersinia enterocolitica IP
10393]
gi|351778815|gb|EHB20951.1| putative DEAD box helicase family protein [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431790862|emb|CCO67392.1| DNA or RNA helicase of superfamily II [Yersinia enterocolitica IP
10393]
Length = 585
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R A +IVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|330859690|emb|CBX70027.1| hypothetical protein YEW_IU38240 [Yersinia enterocolitica W22703]
Length = 226
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R A +IVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|332162313|ref|YP_004298890.1| putative DEAD box helicase family protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325666543|gb|ADZ43187.1| putative DEAD box helicase family protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 585
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R A +IVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|386307742|ref|YP_006003798.1| DNA or RNA helicase of superfamily II [Yersinia enterocolitica
subsp. palearctica Y11]
gi|318606384|emb|CBY27882.1| DNA or RNA helicase of superfamily II [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 585
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R A +IVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|238761998|ref|ZP_04622971.1| hypothetical protein ykris0001_4070 [Yersinia kristensenii ATCC
33638]
gi|238699726|gb|EEP92470.1| hypothetical protein ykris0001_4070 [Yersinia kristensenii ATCC
33638]
Length = 585
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R A +IVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|259907986|ref|YP_002648342.1| ATP-dependent helicase [Erwinia pyrifoliae Ep1/96]
gi|387870788|ref|YP_005802160.1| hypothetical protein EPYR_01409 [Erwinia pyrifoliae DSM 12163]
gi|224963608|emb|CAX55101.1| Putative ATP-dependent helicase [Erwinia pyrifoliae Ep1/96]
gi|283477873|emb|CAY73789.1| Uncharacterized protein yejH [Erwinia pyrifoliae DSM 12163]
Length = 584
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ R + VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVNATISYFRRSTQPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|123441747|ref|YP_001005731.1| DEAD/DEAH box helicase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088708|emb|CAL11513.1| putative DEAD box helicase family protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 585
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R A +IVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|238789716|ref|ZP_04633499.1| hypothetical protein yfred0001_40330 [Yersinia frederiksenii ATCC
33641]
gi|238722269|gb|EEQ13926.1| hypothetical protein yfred0001_40330 [Yersinia frederiksenii ATCC
33641]
Length = 585
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R A +IVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|429885572|ref|ZP_19367155.1| DNA or RNA helicase of superfamily II [Vibrio cholerae PS15]
gi|429227599|gb|EKY33592.1| DNA or RNA helicase of superfamily II [Vibrio cholerae PS15]
Length = 589
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|229508251|ref|ZP_04397756.1| helicase-related protein [Vibrio cholerae BX 330286]
gi|229511510|ref|ZP_04400989.1| helicase-related protein [Vibrio cholerae B33]
gi|229518649|ref|ZP_04408092.1| helicase-related protein [Vibrio cholerae RC9]
gi|229607825|ref|YP_002878473.1| helicase-related protein [Vibrio cholerae MJ-1236]
gi|255744935|ref|ZP_05418885.1| helicase-related protein [Vibrio cholera CIRS 101]
gi|262161780|ref|ZP_06030798.1| helicase-related protein [Vibrio cholerae INDRE 91/1]
gi|379741482|ref|YP_005333451.1| helicase-like protein [Vibrio cholerae IEC224]
gi|418334665|ref|ZP_12943582.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-06A1]
gi|418338287|ref|ZP_12947181.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-23A1]
gi|418346204|ref|ZP_12950968.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-28A1]
gi|419826629|ref|ZP_14350128.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1033(6)]
gi|421318002|ref|ZP_15768570.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1032(5)]
gi|421321424|ref|ZP_15771977.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1038(11)]
gi|421325218|ref|ZP_15775742.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1041(14)]
gi|421328882|ref|ZP_15779392.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1042(15)]
gi|421332767|ref|ZP_15783245.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1046(19)]
gi|421336377|ref|ZP_15786839.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1048(21)]
gi|421339369|ref|ZP_15789804.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-20A2]
gi|421347563|ref|ZP_15797941.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-46A1]
gi|422891926|ref|ZP_16934210.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-40A1]
gi|422902953|ref|ZP_16937935.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-48A1]
gi|422906836|ref|ZP_16941647.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-70A1]
gi|422913689|ref|ZP_16948197.1| type III restriction enzyme, res subunit [Vibrio cholerae HFU-02]
gi|422925892|ref|ZP_16958908.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-38A1]
gi|423145215|ref|ZP_17132811.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-19A1]
gi|423149889|ref|ZP_17137205.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-21A1]
gi|423153704|ref|ZP_17140892.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-22A1]
gi|423156792|ref|ZP_17143887.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-32A1]
gi|423165168|ref|ZP_17151908.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-48B2]
gi|423731200|ref|ZP_17704505.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-17A1]
gi|423760558|ref|ZP_17712572.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-50A2]
gi|423930156|ref|ZP_17731235.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-77A1]
gi|424002646|ref|ZP_17745722.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-17A2]
gi|424006433|ref|ZP_17749404.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-37A1]
gi|424024413|ref|ZP_17764065.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-62B1]
gi|424027293|ref|ZP_17766897.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-69A1]
gi|424586567|ref|ZP_18026148.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1030(3)]
gi|424595216|ref|ZP_18034539.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1040(13)]
gi|424599132|ref|ZP_18038315.1| type III restriction enzyme, res subunit [Vibrio Cholerae
CP1044(17)]
gi|424601856|ref|ZP_18041000.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1047(20)]
gi|424617436|ref|ZP_18056110.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-42A1]
gi|424645181|ref|ZP_18082919.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-56A2]
gi|424652947|ref|ZP_18090329.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-57A2]
gi|424656769|ref|ZP_18094056.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-81A2]
gi|440709878|ref|ZP_20890529.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
4260B]
gi|443504011|ref|ZP_21070971.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-64A1]
gi|443507909|ref|ZP_21074675.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-65A1]
gi|443511751|ref|ZP_21078391.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-67A1]
gi|443515306|ref|ZP_21081820.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-68A1]
gi|443519100|ref|ZP_21085499.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-71A1]
gi|443523994|ref|ZP_21090208.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-72A2]
gi|443531594|ref|ZP_21097608.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-7A1]
gi|443535388|ref|ZP_21101267.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-80A1]
gi|443538937|ref|ZP_21104791.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-81A1]
gi|449055918|ref|ZP_21734586.1| ATP-dependent RNA helicase YejH [Vibrio cholerae O1 str. Inaba
G4222]
gi|229343338|gb|EEO08313.1| helicase-related protein [Vibrio cholerae RC9]
gi|229351475|gb|EEO16416.1| helicase-related protein [Vibrio cholerae B33]
gi|229355756|gb|EEO20677.1| helicase-related protein [Vibrio cholerae BX 330286]
gi|229370480|gb|ACQ60903.1| helicase-related protein [Vibrio cholerae MJ-1236]
gi|255737406|gb|EET92801.1| helicase-related protein [Vibrio cholera CIRS 101]
gi|262028512|gb|EEY47167.1| helicase-related protein [Vibrio cholerae INDRE 91/1]
gi|341622001|gb|EGS47685.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-70A1]
gi|341622224|gb|EGS47906.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-48A1]
gi|341622892|gb|EGS48491.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-40A1]
gi|341637884|gb|EGS62549.1| type III restriction enzyme, res subunit [Vibrio cholerae HFU-02]
gi|341646765|gb|EGS70871.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-38A1]
gi|356418139|gb|EHH71744.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-06A1]
gi|356418659|gb|EHH72246.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-21A1]
gi|356423463|gb|EHH76913.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-19A1]
gi|356428803|gb|EHH82023.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-22A1]
gi|356429929|gb|EHH83138.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-23A1]
gi|356433946|gb|EHH87129.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-28A1]
gi|356440299|gb|EHH93249.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-32A1]
gi|356452819|gb|EHI05497.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-48B2]
gi|378794992|gb|AFC58463.1| helicase-like protein [Vibrio cholerae IEC224]
gi|395916260|gb|EJH27090.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1032(5)]
gi|395917056|gb|EJH27884.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1041(14)]
gi|395918418|gb|EJH29242.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1038(11)]
gi|395927416|gb|EJH38179.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1042(15)]
gi|395929374|gb|EJH40124.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1046(19)]
gi|395933388|gb|EJH44128.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1048(21)]
gi|395944317|gb|EJH54991.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-20A2]
gi|395944560|gb|EJH55233.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-46A1]
gi|395959442|gb|EJH69874.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-56A2]
gi|395960020|gb|EJH70412.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-57A2]
gi|395962975|gb|EJH73258.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-42A1]
gi|395974156|gb|EJH83691.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1030(3)]
gi|395976397|gb|EJH85847.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1047(20)]
gi|408032852|gb|EKG69422.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1040(13)]
gi|408042266|gb|EKG78326.1| type III restriction enzyme, res subunit [Vibrio Cholerae
CP1044(17)]
gi|408054295|gb|EKG89278.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-81A2]
gi|408607419|gb|EKK80822.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1033(6)]
gi|408624652|gb|EKK97593.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-17A1]
gi|408636338|gb|EKL08491.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-50A2]
gi|408654695|gb|EKL25829.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-77A1]
gi|408845815|gb|EKL85928.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-37A1]
gi|408846217|gb|EKL86325.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-17A2]
gi|408870684|gb|EKM09957.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-62B1]
gi|408879309|gb|EKM18293.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-69A1]
gi|439974101|gb|ELP50278.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
4260B]
gi|443431496|gb|ELS74046.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-64A1]
gi|443435336|gb|ELS81477.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-65A1]
gi|443439163|gb|ELS88876.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-67A1]
gi|443443367|gb|ELS96666.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-68A1]
gi|443447120|gb|ELT03773.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-71A1]
gi|443449865|gb|ELT10155.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-72A2]
gi|443456984|gb|ELT24381.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-7A1]
gi|443461306|gb|ELT32378.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-80A1]
gi|443465037|gb|ELT39697.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-81A1]
gi|448264957|gb|EMB02194.1| ATP-dependent RNA helicase YejH [Vibrio cholerae O1 str. Inaba
G4222]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|15641641|ref|NP_231273.1| helicase-like protein [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121591197|ref|ZP_01678500.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
2740-80]
gi|153819729|ref|ZP_01972396.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
NCTC 8457]
gi|227081788|ref|YP_002810339.1| helicase-like protein [Vibrio cholerae M66-2]
gi|254848755|ref|ZP_05238105.1| ATP-dependent RNA helicase [Vibrio cholerae MO10]
gi|298498282|ref|ZP_07008089.1| ATP-dependent RNA helicase [Vibrio cholerae MAK 757]
gi|9656148|gb|AAF94787.1| helicase-related protein [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121546952|gb|EAX57100.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
2740-80]
gi|126509720|gb|EAZ72314.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
NCTC 8457]
gi|227009676|gb|ACP05888.1| helicase-related protein [Vibrio cholerae M66-2]
gi|254844460|gb|EET22874.1| ATP-dependent RNA helicase [Vibrio cholerae MO10]
gi|297542615|gb|EFH78665.1| ATP-dependent RNA helicase [Vibrio cholerae MAK 757]
Length = 657
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 67 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 119
>gi|424606818|ref|ZP_18045764.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1050(23)]
gi|424629648|ref|ZP_18067937.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-51A1]
gi|408043716|gb|EKG79699.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1050(23)]
gi|408055815|gb|EKG90725.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-51A1]
Length = 426
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|424591333|ref|ZP_18030763.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1037(10)]
gi|408032131|gb|EKG68726.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1037(10)]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|424622214|ref|ZP_18060724.1| type III restriction enzyme, res subunit, partial [Vibrio
cholerae HC-47A1]
gi|395971337|gb|EJH81014.1| type III restriction enzyme, res subunit, partial [Vibrio
cholerae HC-47A1]
Length = 367
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|419837410|ref|ZP_14360848.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-46B1]
gi|421344717|ref|ZP_15795120.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-43B1]
gi|423735359|ref|ZP_17708557.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-41B1]
gi|424009702|ref|ZP_17752639.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-44C1]
gi|395940797|gb|EJH51478.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-43B1]
gi|408629921|gb|EKL02573.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-41B1]
gi|408855958|gb|EKL95653.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-46B1]
gi|408863949|gb|EKM03417.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-44C1]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|360035527|ref|YP_004937291.1| helicase-related protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|356646681|gb|AET26736.1| helicase-related protein [Vibrio cholerae O1 str. 2010EL-1786]
Length = 639
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 49 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 101
>gi|424810320|ref|ZP_18235677.1| helicase-related protein [Vibrio mimicus SX-4]
gi|342322448|gb|EGU18238.1| helicase-related protein [Vibrio mimicus SX-4]
Length = 588
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|422922917|ref|ZP_16956087.1| type III restriction enzyme, res subunit [Vibrio cholerae BJG-01]
gi|341644686|gb|EGS68867.1| type III restriction enzyme, res subunit [Vibrio cholerae BJG-01]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|422910706|ref|ZP_16945339.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-09]
gi|341633115|gb|EGS57955.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-09]
Length = 589
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|417824917|ref|ZP_12471505.1| type III restriction enzyme, res subunit [Vibrio cholerae HE48]
gi|340046402|gb|EGR07332.1| type III restriction enzyme, res subunit [Vibrio cholerae HE48]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|417821028|ref|ZP_12467642.1| type III restriction enzyme, res subunit [Vibrio cholerae HE39]
gi|423954916|ref|ZP_17734740.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-40]
gi|423984135|ref|ZP_17738290.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-46]
gi|340038659|gb|EGQ99633.1| type III restriction enzyme, res subunit [Vibrio cholerae HE39]
gi|408658721|gb|EKL29785.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-40]
gi|408664752|gb|EKL35579.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-46]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|384424693|ref|YP_005634051.1| DNA or RNA helicase of superfamily II [Vibrio cholerae LMA3984-4]
gi|327484246|gb|AEA78653.1| DNA or RNA helicase of superfamily II [Vibrio cholerae LMA3984-4]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|297579214|ref|ZP_06941142.1| ATP-dependent RNA helicase [Vibrio cholerae RC385]
gi|297536808|gb|EFH75641.1| ATP-dependent RNA helicase [Vibrio cholerae RC385]
Length = 652
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 67 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 119
>gi|262404054|ref|ZP_06080609.1| helicase-related protein [Vibrio sp. RC586]
gi|262349086|gb|EEY98224.1| helicase-related protein [Vibrio sp. RC586]
Length = 588
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|262190572|ref|ZP_06048813.1| helicase-related protein [Vibrio cholerae CT 5369-93]
gi|262033559|gb|EEY52056.1| helicase-related protein [Vibrio cholerae CT 5369-93]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|262165812|ref|ZP_06033549.1| helicase-related protein [Vibrio mimicus VM223]
gi|262025528|gb|EEY44196.1| helicase-related protein [Vibrio mimicus VM223]
Length = 588
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|262171354|ref|ZP_06039032.1| helicase-related protein [Vibrio mimicus MB-451]
gi|261892430|gb|EEY38416.1| helicase-related protein [Vibrio mimicus MB-451]
Length = 588
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|261211758|ref|ZP_05926045.1| helicase-related protein [Vibrio sp. RC341]
gi|260839108|gb|EEX65740.1| helicase-related protein [Vibrio sp. RC341]
Length = 588
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|258621921|ref|ZP_05716951.1| helicase-related protein [Vibrio mimicus VM573]
gi|258585859|gb|EEW10578.1| helicase-related protein [Vibrio mimicus VM573]
Length = 610
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 26 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 78
>gi|258624940|ref|ZP_05719867.1| helicase-related protein [Vibrio mimicus VM603]
gi|258582796|gb|EEW07618.1| helicase-related protein [Vibrio mimicus VM603]
Length = 610
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 26 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 78
>gi|229515032|ref|ZP_04404492.1| helicase-related protein [Vibrio cholerae TMA 21]
gi|421351372|ref|ZP_15801737.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-25]
gi|229347737|gb|EEO12696.1| helicase-related protein [Vibrio cholerae TMA 21]
gi|395951817|gb|EJH62431.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-25]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|229520765|ref|ZP_04410188.1| helicase-related protein [Vibrio cholerae TM 11079-80]
gi|419830163|ref|ZP_14353648.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-1A2]
gi|419833803|ref|ZP_14357260.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-61A2]
gi|421354347|ref|ZP_15804679.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-45]
gi|422917553|ref|ZP_16951872.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-02A1]
gi|423822151|ref|ZP_17716472.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-55C2]
gi|423855287|ref|ZP_17720271.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-59A1]
gi|423997983|ref|ZP_17741236.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-02C1]
gi|424019802|ref|ZP_17759589.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-59B1]
gi|424625167|ref|ZP_18063629.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-50A1]
gi|424633696|ref|ZP_18071797.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-52A1]
gi|424636776|ref|ZP_18074785.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-55A1]
gi|424640689|ref|ZP_18078573.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-56A1]
gi|424648756|ref|ZP_18086420.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-57A1]
gi|443527677|ref|ZP_21093727.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-78A1]
gi|229342320|gb|EEO07315.1| helicase-related protein [Vibrio cholerae TM 11079-80]
gi|341637337|gb|EGS62024.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-02A1]
gi|395953472|gb|EJH64085.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-45]
gi|408013076|gb|EKG50825.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-50A1]
gi|408018561|gb|EKG56000.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-52A1]
gi|408023888|gb|EKG61040.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-56A1]
gi|408024388|gb|EKG61498.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-55A1]
gi|408033435|gb|EKG69984.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-57A1]
gi|408619936|gb|EKK92948.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-1A2]
gi|408635043|gb|EKL07269.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-55C2]
gi|408641612|gb|EKL13386.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-59A1]
gi|408649758|gb|EKL21068.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-61A2]
gi|408852828|gb|EKL92647.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-02C1]
gi|408867471|gb|EKM06830.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-59B1]
gi|443453872|gb|ELT17689.1| type III restriction enzyme, res subunit [Vibrio cholerae
HC-78A1]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|229523731|ref|ZP_04413136.1| helicase-related protein [Vibrio cholerae bv. albensis VL426]
gi|229337312|gb|EEO02329.1| helicase-related protein [Vibrio cholerae bv. albensis VL426]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|229529331|ref|ZP_04418721.1| helicase-related protein [Vibrio cholerae 12129(1)]
gi|229333105|gb|EEN98591.1| helicase-related protein [Vibrio cholerae 12129(1)]
Length = 585
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|254285420|ref|ZP_04960385.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
AM-19226]
gi|150424692|gb|EDN16628.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
AM-19226]
Length = 657
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 67 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 119
>gi|153826177|ref|ZP_01978844.1| DNA or RNA helicase [Vibrio cholerae MZO-2]
gi|149740118|gb|EDM54283.1| DNA or RNA helicase [Vibrio cholerae MZO-2]
Length = 589
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|153830674|ref|ZP_01983341.1| putative DNA or RNA helicase [Vibrio cholerae 623-39]
gi|148873854|gb|EDL71989.1| putative DNA or RNA helicase [Vibrio cholerae 623-39]
Length = 589
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|153823784|ref|ZP_01976451.1| DNA or RNA helicase, partial [Vibrio cholerae B33]
gi|126518695|gb|EAZ75918.1| DNA or RNA helicase [Vibrio cholerae B33]
Length = 296
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|153801559|ref|ZP_01956145.1| DNA or RNA helicase [Vibrio cholerae MZO-3]
gi|124122886|gb|EAY41629.1| DNA or RNA helicase [Vibrio cholerae MZO-3]
Length = 480
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|153216917|ref|ZP_01950681.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
1587]
gi|124114066|gb|EAY32886.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
1587]
Length = 594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 4 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 56
>gi|121728923|ref|ZP_01681930.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
V52]
gi|147675688|ref|YP_001217186.1| DEAD/DEAH box helicase [Vibrio cholerae O395]
gi|227118094|ref|YP_002819990.1| helicase-related protein [Vibrio cholerae O395]
gi|121628809|gb|EAX61271.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
V52]
gi|146317571|gb|ABQ22110.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Vibrio cholerae
O395]
gi|227013544|gb|ACP09754.1| helicase-related protein [Vibrio cholerae O395]
Length = 657
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV R R LVL +
Sbjct: 67 LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 119
>gi|441519118|ref|ZP_21000820.1| putative ATP-dependent DNA helicase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441454011|dbj|GAC58781.1| putative ATP-dependent DNA helicase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 547
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 182 LRDYQQLATDSFWAGG---SGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTV 232
>gi|257075961|ref|ZP_05570322.1| DNA repair helicase [Ferroplasma acidarmanus fer1]
Length = 443
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ+KSL N SG IVLP AGK+++G+ A ++ ++L
Sbjct: 63 LRPYQKKSLEMWQRNNY--SGTIVLPTAAGKTILGIYAITMLKVPTIIL 109
>gi|422009086|ref|ZP_16356069.1| ATP-dependent helicase with nucleoside triP hydrolase domain
[Providencia rettgeri Dmel1]
gi|414092904|gb|EKT54576.1| ATP-dependent helicase with nucleoside triP hydrolase domain
[Providencia rettgeri Dmel1]
Length = 585
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
VLRPYQ++++ R ++ VIVLP GAGKSLV R R LVL +
Sbjct: 4 VLRPYQQEAVDATVDYFRKQTHPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|268591198|ref|ZP_06125419.1| putative helicase, ATP-dependent [Providencia rettgeri DSM 1131]
gi|291313359|gb|EFE53812.1| putative helicase, ATP-dependent [Providencia rettgeri DSM 1131]
Length = 585
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
VLRPYQ++++ R ++ VIVLP GAGKSLV R R LVL +
Sbjct: 4 VLRPYQQEAVDATVDYFRKQTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|378766467|ref|YP_005194929.1| ATP-dependent helicase [Pantoea ananatis LMG 5342]
gi|365185942|emb|CCF08892.1| ATP-dependent helicase [Pantoea ananatis LMG 5342]
Length = 584
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATLAHFRRHPEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|386016460|ref|YP_005934747.1| helicase YejH [Pantoea ananatis AJ13355]
gi|386078671|ref|YP_005992196.1| helicase YejH [Pantoea ananatis PA13]
gi|327394529|dbj|BAK11951.1| helicase YejH [Pantoea ananatis AJ13355]
gi|354987852|gb|AER31976.1| helicase YejH [Pantoea ananatis PA13]
Length = 584
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATLAHFRRHPEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|291618130|ref|YP_003520872.1| hypothetical protein PANA_2577 [Pantoea ananatis LMG 20103]
gi|291153160|gb|ADD77744.1| YejH [Pantoea ananatis LMG 20103]
Length = 600
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 18 SFTLRPYQQEAVDATLAHFRRHPEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 73
>gi|271970086|ref|YP_003344282.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270513261|gb|ACZ91539.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 548
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ ++ + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 182 LRTYQREAAEAFWHGG---SGVVVLPCGAGKTIVGAAAMAHAKATTLILVTNTV 232
>gi|91226538|ref|ZP_01261287.1| helicase-related protein, partial [Vibrio alginolyticus 12G01]
gi|91189170|gb|EAS75451.1| helicase-related protein [Vibrio alginolyticus 12G01]
Length = 180
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|381181009|ref|ZP_09889845.1| helicase domain protein [Treponema saccharophilum DSM 2985]
gi|380767014|gb|EIC01017.1| helicase domain protein [Treponema saccharophilum DSM 2985]
Length = 614
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 6 KPSAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
KP +V R YQ ++ + G+ A +G IVLPCGAGK++VG+ ++ L++
Sbjct: 225 KPFSV-RQYQSEAADSIVGDKGAGTGFGTIVLPCGAGKTIVGMATMALLKTSTLII 279
>gi|399545981|ref|YP_006559289.1| hypothetical protein MRBBS_2940 [Marinobacter sp. BSs20148]
gi|399161313|gb|AFP31876.1| Uncharacterized protein yejH [Marinobacter sp. BSs20148]
Length = 598
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ++++ + R S VIVLP GAGKSLV R++ LVL
Sbjct: 7 LRPYQQEAVDATLKHFRKSDDSAVIVLPTGAGKSLVIAELARLARRKILVL 57
>gi|126667031|ref|ZP_01738006.1| putative ATP-dependent helicase with nucleoside triP hydrolase
domain [Marinobacter sp. ELB17]
gi|126628437|gb|EAZ99059.1| putative ATP-dependent helicase with nucleoside triP hydrolase
domain [Marinobacter sp. ELB17]
Length = 594
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LRPYQ++++ + R S VIVLP GAGKSLV R++ LVL
Sbjct: 7 LRPYQQEAVDATLKHFRKSDDSAVIVLPTGAGKSLVIAELARLARRKILVL 57
>gi|238794237|ref|ZP_04637851.1| hypothetical protein yinte0001_11550 [Yersinia intermedia ATCC
29909]
gi|238726419|gb|EEQ17959.1| hypothetical protein yinte0001_11550 [Yersinia intermedia ATCC
29909]
Length = 585
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R S +IVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRRHSEPALIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|372275006|ref|ZP_09511042.1| hypothetical protein PSL1_07913 [Pantoea sp. SL1_M5]
gi|390435224|ref|ZP_10223762.1| hypothetical protein PaggI_10337 [Pantoea agglomerans IG1]
Length = 584
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ+ ++ + R + VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQDAVNATVAHFRRHQQPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|444431450|ref|ZP_21226617.1| putative ATP-dependent DNA helicase [Gordonia soli NBRC 108243]
gi|443887859|dbj|GAC68338.1| putative ATP-dependent DNA helicase [Gordonia soli NBRC 108243]
Length = 555
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG A T + L+L + V
Sbjct: 182 LRDYQSLAAESFWAGG---SGVVVLPCGAGKTMVGAAAMATAKATTLILVTNTV 232
>gi|311278833|ref|YP_003941064.1| type III restriction protein res subunit [Enterobacter cloacae
SCF1]
gi|308748028|gb|ADO47780.1| type III restriction protein res subunit [Enterobacter cloacae
SCF1]
Length = 586
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRA--RSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R + VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLAHFRQHQQPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|307130684|ref|YP_003882700.1| ATP-dependet helicase [Dickeya dadantii 3937]
gi|306528213|gb|ADM98143.1| predicted ATP-dependet helicase [Dickeya dadantii 3937]
Length = 591
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ R + VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|271500912|ref|YP_003333937.1| type III restriction protein res subunit [Dickeya dadantii
Ech586]
gi|270344467|gb|ACZ77232.1| type III restriction protein res subunit [Dickeya dadantii
Ech586]
Length = 586
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ R + VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|251790039|ref|YP_003004760.1| type III restriction protein res subunit [Dickeya zeae Ech1591]
gi|247538660|gb|ACT07281.1| type III restriction protein res subunit [Dickeya zeae Ech1591]
Length = 591
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ R + VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|229582208|ref|YP_002840607.1| type III restriction protein res subunit [Sulfolobus islandicus
Y.N.15.51]
gi|228012924|gb|ACP48685.1| type III restriction protein res subunit [Sulfolobus islandicus
Y.N.15.51]
Length = 560
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ +++ NG GVI LP G GK++VG+ +RK L++
Sbjct: 164 LREYQREAIENWIKNGN--RGVIALPTGTGKTVVGIKGIDVIRKPTLIV 210
>gi|242239778|ref|YP_002987959.1| type III restriction protein res subunit [Dickeya dadantii
Ech703]
gi|242131835|gb|ACS86137.1| type III restriction protein res subunit [Dickeya dadantii
Ech703]
Length = 586
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATLAHFRRHHSPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|390939036|ref|YP_006402774.1| type III restriction protein res subunit [Desulfurococcus
fermentans DSM 16532]
gi|390192143|gb|AFL67199.1| type III restriction protein res subunit [Desulfurococcus
fermentans DSM 16532]
Length = 550
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 2 TIDLKP---SAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALV 58
++ +KP + LR YQ ++L K N GVI LP G+GK+L+GV A R+L+
Sbjct: 154 SLQVKPELRNIALRDYQREALSKWVENNY--RGVIALPTGSGKTLIGVAAIIEKAVRSLI 211
Query: 59 L 59
+
Sbjct: 212 I 212
>gi|284007247|emb|CBA72544.1| helicase [Arsenophonus nasoniae]
Length = 585
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKM--FGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ+ ++ + G VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQDAVHAAINYFRGHKEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|16082050|ref|NP_394476.1| DNA repair protein RAD25 [Thermoplasma acidophilum DSM 1728]
gi|10640331|emb|CAC12145.1| DNA repair protein RAD25 related protein [Thermoplasma acidophilum]
Length = 453
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 3 IDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
++L LRPYQ ++L + G G +VLP AGK+ +G+ A V +RAL+L
Sbjct: 65 LNLNGRISLRPYQLQALEEWKKYGM--RGTVVLPTAAGKTHIGMAAIQAVSERALIL 119
>gi|404421548|ref|ZP_11003263.1| DNA or RNA helicase of superfamily protein II [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403658859|gb|EJZ13553.1| DNA or RNA helicase of superfamily protein II [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 542
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 175 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTV 225
>gi|126458923|ref|YP_001055201.1| DNA repair helicase RAD25 [Pyrobaculum calidifontis JCM 11548]
gi|126248644|gb|ABO07735.1| DNA repair helicase RAD25 [Pyrobaculum calidifontis JCM 11548]
Length = 456
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 9 AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
A LR YQ ++L +A+ GV+V+P GAGK+ V + A +R ALV+
Sbjct: 81 AKLRSYQAEALAAW---SKAKRGVVVMPTGAGKTYVAIAAIAQMRVPALVV 128
>gi|118468039|ref|YP_889939.1| DNA or RNA helicase of superfamily protein II [Mycobacterium
smegmatis str. MC2 155]
gi|118169326|gb|ABK70222.1| DNA or RNA helicase of superfamily protein II [Mycobacterium
smegmatis str. MC2 155]
Length = 585
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 218 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTV 268
>gi|332297020|ref|YP_004438942.1| helicase domain-containing protein [Treponema brennaborense DSM
12168]
gi|332180123|gb|AEE15811.1| helicase domain-containing protein [Treponema brennaborense DSM
12168]
Length = 638
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 2 TIDLKPSAVLRPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
T+ KP + R YQ ++ + G+ R +G IVLPCGAGK++VG+ ++ L++
Sbjct: 241 TVSGKPFEI-RNYQNEAADALVGDKRPGTGFGTIVLPCGAGKTIVGMNIMNRLKTSTLII 299
>gi|399989940|ref|YP_006570290.1| type III restriction enzyme, res subunit [Mycobacterium smegmatis
str. MC2 155]
gi|441215685|ref|ZP_20976615.1| DNA helicase Ercc3 [Mycobacterium smegmatis MKD8]
gi|399234502|gb|AFP41995.1| Type III restriction enzyme, res subunit [Mycobacterium smegmatis
str. MC2 155]
gi|440624767|gb|ELQ86626.1| DNA helicase Ercc3 [Mycobacterium smegmatis MKD8]
Length = 549
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQEMAADSFWAGG---SGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTV 232
>gi|432457292|ref|ZP_19699476.1| ATP-dependent helicase [Escherichia coli KTE201]
gi|433058704|ref|ZP_20245750.1| ATP-dependent helicase [Escherichia coli KTE124]
gi|430982026|gb|ELC98745.1| ATP-dependent helicase [Escherichia coli KTE201]
gi|431568959|gb|ELI41921.1| ATP-dependent helicase [Escherichia coli KTE124]
Length = 586
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVNATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|409095809|ref|ZP_11215833.1| DNA/RNA repair helicase [Thermococcus zilligii AN1]
Length = 469
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 10 VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
VLR YQE+++RK + + GV+ LP G+GK++VG+ + AL++ ++
Sbjct: 96 VLRKYQERAVRKAV---KEKMGVLALPVGSGKTVVGLAIIHRLNLSALIVVHT 145
>gi|359771470|ref|ZP_09274921.1| putative ATP-dependent DNA helicase [Gordonia effusa NBRC 100432]
gi|359311357|dbj|GAB17699.1| putative ATP-dependent DNA helicase [Gordonia effusa NBRC 100432]
Length = 556
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK++VG A L+L + V
Sbjct: 185 LRDYQALAAESFWAGG---SGVVVLPCGAGKTMVGAAAMAQASATTLILVTNTV 235
>gi|238784263|ref|ZP_04628275.1| hypothetical protein yberc0001_27060 [Yersinia bercovieri ATCC
43970]
gi|238714830|gb|EEQ06830.1| hypothetical protein yberc0001_27060 [Yersinia bercovieri ATCC
43970]
Length = 608
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 5 LKPSAV----LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALV 58
L+ SA+ LRPYQ++++ + R A +IVLP GAGKSLV R R LV
Sbjct: 18 LRASALMAFTLRPYQQEAVDATLTHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLV 77
Query: 59 LCN 61
L +
Sbjct: 78 LAH 80
>gi|407985074|ref|ZP_11165676.1| type III restriction enzyme, res subunit [Mycobacterium hassiacum
DSM 44199]
gi|407373345|gb|EKF22359.1| type III restriction enzyme, res subunit [Mycobacterium hassiacum
DSM 44199]
Length = 549
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQRMAADSFWEGG---SGVVVLPCGAGKTLVGAAAMAKASATTLILVTNTV 232
>gi|333989429|ref|YP_004522043.1| DNA helicase Ercc3 [Mycobacterium sp. JDM601]
gi|333485397|gb|AEF34789.1| DNA helicase Ercc3 [Mycobacterium sp. JDM601]
Length = 550
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 183 LRDYQEMAADSFWSGG---SGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTV 233
>gi|434384534|ref|YP_007095145.1| DNA/RNA helicase, superfamily II [Chamaesiphon minutus PCC 6605]
gi|428015524|gb|AFY91618.1| DNA/RNA helicase, superfamily II [Chamaesiphon minutus PCC 6605]
Length = 501
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 2 TIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
+++L L PY ++ M R GVIVLP GAGK+LV A + L+L
Sbjct: 68 SLELDSQLNLEPYPHQAAALMAWKQAGRQGVIVLPTGAGKTLVAQLAIAATPRSTLIL 125
>gi|82776213|ref|YP_402562.1| ATP-dependent helicase [Shigella dysenteriae Sd197]
gi|81240361|gb|ABB61071.1| putative ATP-dependent helicase [Shigella dysenteriae Sd197]
Length = 586
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVMAELARLARGRVLVLAH 57
>gi|403251986|ref|ZP_10918301.1| DNA/RNA helicase, superfamily II [actinobacterium SCGC AAA027-L06]
gi|402914731|gb|EJX35739.1| DNA/RNA helicase, superfamily II [actinobacterium SCGC AAA027-L06]
Length = 547
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
+R YQE + + G SGV+VLPCGAGK++VG A + L+L + V
Sbjct: 182 IRKYQELAAEGFWHGG---SGVVVLPCGAGKTIVGAAAMAHAKATTLILVTNTV 232
>gi|309786648|ref|ZP_07681268.1| type III restriction enzyme, res subunit [Shigella dysenteriae
1617]
gi|308925341|gb|EFP70828.1| type III restriction enzyme, res subunit [Shigella dysenteriae
1617]
Length = 586
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVMAELARLARGRVLVLAH 57
>gi|227832581|ref|YP_002834288.1| helicase [Corynebacterium aurimucosum ATCC 700975]
gi|262182936|ref|ZP_06042357.1| putative helicase [Corynebacterium aurimucosum ATCC 700975]
gi|227453597|gb|ACP32350.1| putative helicase [Corynebacterium aurimucosum ATCC 700975]
Length = 545
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ + + G SG++VLPCGAGK++VG A + L+L + V
Sbjct: 183 LRDYQQYAADSFWSGG---SGIVVLPCGAGKTIVGAAAMAKAQATTLILVTNTV 233
>gi|383791881|ref|YP_005476455.1| DNA/RNA helicase [Spirochaeta africana DSM 8902]
gi|383108415|gb|AFG38748.1| DNA/RNA helicase, superfamily II [Spirochaeta africana DSM 8902]
Length = 568
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 12 RPYQEKSLRKMFGNGRARSG--VIVLPCGAGKSLVGVTACCTVRKRALVL 59
R YQ ++ G+GR +G +VL CGAGK++VG+ A ++ L+L
Sbjct: 201 REYQVAAVESFVGDGRPGTGFGTVVLACGAGKTIVGMQAMYRLQTSTLIL 250
>gi|393764339|ref|ZP_10352951.1| type III restriction enzyme, res subunit [Alishewanella agri
BL06]
gi|392604969|gb|EIW87868.1| type III restriction enzyme, res subunit [Alishewanella agri
BL06]
Length = 577
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ+++++ + + R S VIVLP GAGKSLV R R LVL
Sbjct: 4 LRDYQQQAVQAAISHFKQRDESAVIVLPTGAGKSLVIAELARQARGRVLVL 54
>gi|358461384|ref|ZP_09171548.1| helicase domain protein [Frankia sp. CN3]
gi|357073367|gb|EHI82874.1| helicase domain protein [Frankia sp. CN3]
Length = 545
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ+ ++ + G SGVIVLP GAGK++VG A L+L + V
Sbjct: 182 LRDYQKGAVAGFWEGG---SGVIVLPSGAGKTIVGAAAMARASSTTLILVTNTV 232
>gi|437820825|ref|ZP_20843264.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SARB17]
gi|435307013|gb|ELO82221.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SARB17]
Length = 586
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHCTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|406676383|ref|ZP_11083569.1| hypothetical protein HMPREF1170_01777 [Aeromonas veronii AMC35]
gi|404626606|gb|EKB23416.1| hypothetical protein HMPREF1170_01777 [Aeromonas veronii AMC35]
Length = 593
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
VLRPYQ ++ + + R V+VLP GAGKSLV R R LVL +
Sbjct: 10 VLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAH 63
>gi|377576468|ref|ZP_09805452.1| hypothetical protein YejH [Escherichia hermannii NBRC 105704]
gi|377542500|dbj|GAB50617.1| hypothetical protein YejH [Escherichia hermannii NBRC 105704]
Length = 585
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ +++ + R A VIVLP GAGKS+V R R LVL +
Sbjct: 4 LRPYQREAVDATLAHFRQSADPAVIVLPTGAGKSIVIAELARVARGRVLVLAH 56
>gi|440760421|ref|ZP_20939533.1| DNA or RNA helicase of superfamily II [Pantoea agglomerans 299R]
gi|436425794|gb|ELP23519.1| DNA or RNA helicase of superfamily II [Pantoea agglomerans 299R]
Length = 610
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ+ ++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 28 SFTLRPYQQDAVNATVAHFRRHQEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 83
>gi|411008910|ref|ZP_11385239.1| putative helicase, ATP-dependent [Aeromonas aquariorum AAK1]
Length = 586
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
VLRPYQ ++ + + R V+VLP GAGKSLV R R LVL +
Sbjct: 3 VLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAH 56
>gi|423206030|ref|ZP_17192586.1| hypothetical protein HMPREF1168_02221 [Aeromonas veronii AMC34]
gi|404623421|gb|EKB20273.1| hypothetical protein HMPREF1168_02221 [Aeromonas veronii AMC34]
Length = 586
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
VLRPYQ ++ + + R V+VLP GAGKSLV R R LVL +
Sbjct: 3 VLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAH 56
>gi|421496625|ref|ZP_15943846.1| putative helicase, ATP-dependent [Aeromonas media WS]
gi|407184371|gb|EKE58207.1| putative helicase, ATP-dependent [Aeromonas media WS]
Length = 608
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
VLRPYQ ++ + + R V+VLP GAGKSLV R R LVL +
Sbjct: 25 VLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAH 78
>gi|395235323|ref|ZP_10413538.1| putative ATP-dependent helicase [Enterobacter sp. Ag1]
gi|394730219|gb|EJF30111.1| putative ATP-dependent helicase [Enterobacter sp. Ag1]
Length = 586
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRA--RSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ R VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATLSYFRKHPEPAVIVLPTGAGKSLVIAELAKVARGRVLVLAH 57
>gi|381403911|ref|ZP_09928595.1| hypothetical protein S7A_06645 [Pantoea sp. Sc1]
gi|380737110|gb|EIB98173.1| hypothetical protein S7A_06645 [Pantoea sp. Sc1]
Length = 584
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ+ ++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQDAVNATVAHFRRHQEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|334704237|ref|ZP_08520103.1| putative helicase, ATP-dependent [Aeromonas caviae Ae398]
Length = 586
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
VLRPYQ ++ + + R V+VLP GAGKSLV R R LVL +
Sbjct: 3 VLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAH 56
>gi|308187559|ref|YP_003931690.1| hypothetical protein Pvag_2059 [Pantoea vagans C9-1]
gi|308058069|gb|ADO10241.1| Uncharacterized protein yejH [Pantoea vagans C9-1]
Length = 584
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ+ ++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQDAVNATVAHFRRHQEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|304397507|ref|ZP_07379385.1| type III restriction protein res subunit [Pantoea sp. aB]
gi|304355125|gb|EFM19494.1| type III restriction protein res subunit [Pantoea sp. aB]
Length = 584
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGR--ARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ+ ++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQDAVNATVAHFRRHQEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|108801448|ref|YP_641645.1| type III restriction enzyme, res subunit [Mycobacterium sp. MCS]
gi|119870601|ref|YP_940553.1| type III restriction enzyme, res subunit [Mycobacterium sp. KMS]
gi|126437433|ref|YP_001073124.1| type III restriction enzyme, res subunit [Mycobacterium sp. JLS]
gi|108771867|gb|ABG10589.1| type III restriction enzyme, res subunit [Mycobacterium sp. MCS]
gi|119696690|gb|ABL93763.1| type III restriction enzyme, res subunit [Mycobacterium sp. KMS]
gi|126237233|gb|ABO00634.1| type III restriction enzyme, res subunit [Mycobacterium sp. JLS]
Length = 549
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQE + + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQEMAADSFWSGG---SGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTV 232
>gi|117619921|ref|YP_857132.1| helicase, ATP-dependent [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117561328|gb|ABK38276.1| putative helicase, ATP-dependent [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 10 VLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
VLRPYQ ++ + + R V+VLP GAGKSLV R R LVL +
Sbjct: 3 VLRPYQTDAVNAVISHFRQHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAH 56
>gi|445299420|ref|ZP_21411375.1| helicase, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|444881702|gb|ELY05724.1| helicase, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 314
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|437925453|ref|ZP_20850885.1| helicase, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435313033|gb|ELO86810.1| helicase, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
Length = 245
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|437627073|ref|ZP_20805819.1| helicase, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435286283|gb|ELO63568.1| helicase, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
Length = 220
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|62180810|ref|YP_217227.1| ATP-dependent helicase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|375115141|ref|ZP_09760311.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|62128443|gb|AAX66146.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322715287|gb|EFZ06858.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|56412864|ref|YP_149939.1| helicase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197361795|ref|YP_002141431.1| helicase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|56127121|gb|AAV76627.1| putative helicase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197093271|emb|CAR58717.1| putative helicase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|16761164|ref|NP_456781.1| helicase [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|16765552|ref|NP_461167.1| ATP-dependent helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29141141|ref|NP_804483.1| helicase [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|167551197|ref|ZP_02344952.1| putative helicase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167992548|ref|ZP_02573645.1| putative helicase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168466078|ref|ZP_02699948.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168818046|ref|ZP_02830046.1| putative helicase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194442899|ref|YP_002041498.1| helicase [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|197261681|ref|ZP_03161755.1| putative helicase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198244449|ref|YP_002216307.1| helicase [Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|213424221|ref|ZP_03357080.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213581648|ref|ZP_03363474.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|224583279|ref|YP_002637077.1| helicase [Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|238913795|ref|ZP_04657632.1| putative helicase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289824600|ref|ZP_06544143.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|374981259|ref|ZP_09722589.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|375119791|ref|ZP_09764958.1| putative helicase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|378445656|ref|YP_005233288.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450927|ref|YP_005238286.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378700136|ref|YP_005182093.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378958781|ref|YP_005216267.1| hypothetical protein STBHUCCB_6760 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378984785|ref|YP_005247940.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378989610|ref|YP_005252774.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379701454|ref|YP_005243182.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|409250839|ref|YP_006886647.1| Uncharacterized protein yejH [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|418760464|ref|ZP_13316618.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418765137|ref|ZP_13321230.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418772079|ref|ZP_13328083.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418775294|ref|ZP_13331252.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418779952|ref|ZP_13335846.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418783796|ref|ZP_13339641.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418794028|ref|ZP_13349750.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418803259|ref|ZP_13358880.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418809776|ref|ZP_13365328.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418813930|ref|ZP_13369451.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418815195|ref|ZP_13370703.1| helicase [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418822984|ref|ZP_13378395.1| helicase [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418826071|ref|ZP_13381324.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418829968|ref|ZP_13384931.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418836350|ref|ZP_13391234.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418841031|ref|ZP_13395854.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418850905|ref|ZP_13405621.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418854436|ref|ZP_13409110.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418868461|ref|ZP_13422904.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419789756|ref|ZP_14315436.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419792431|ref|ZP_14318070.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421883629|ref|ZP_16314858.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|422026499|ref|ZP_16372890.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm1]
gi|422031525|ref|ZP_16377692.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm2]
gi|427551186|ref|ZP_18928194.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm8]
gi|427567444|ref|ZP_18932909.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm9]
gi|427587689|ref|ZP_18937699.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm3]
gi|427611375|ref|ZP_18942566.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm4]
gi|427634999|ref|ZP_18947460.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm6]
gi|427656533|ref|ZP_18952224.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm10]
gi|427661683|ref|ZP_18957136.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm11]
gi|427670351|ref|ZP_18961936.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm12]
gi|427799170|ref|ZP_18967182.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm5]
gi|445146663|ref|ZP_21387877.1| putative helicase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445154424|ref|ZP_21391751.1| putative helicase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|25376544|pir||AH0785 probable helicase STY2460 [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16420761|gb|AAL21126.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16503462|emb|CAD02606.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29136767|gb|AAO68332.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|194401562|gb|ACF61784.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|195631392|gb|EDX49952.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197239936|gb|EDY22556.1| putative helicase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197938965|gb|ACH76298.1| putative helicase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205324027|gb|EDZ11866.1| putative helicase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205329207|gb|EDZ15971.1| putative helicase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205345089|gb|EDZ31853.1| putative helicase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|224467806|gb|ACN45636.1| putative helicase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261247435|emb|CBG25260.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994305|gb|ACY89190.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158784|emb|CBW18296.1| hypothetical helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913213|dbj|BAJ37187.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320086667|emb|CBY96438.1| Uncharacterized protein yejH [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321224879|gb|EFX49942.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323130553|gb|ADX17983.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|326624058|gb|EGE30403.1| putative helicase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|332989157|gb|AEF08140.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|374352653|gb|AEZ44414.1| hypothetical protein STBHUCCB_6760 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|379986855|emb|CCF87131.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|392615541|gb|EIW97980.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392618729|gb|EIX01123.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392732193|gb|EIZ89404.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392742086|gb|EIZ99181.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392742544|gb|EIZ99631.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392748367|gb|EJA05353.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392750861|gb|EJA07820.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392756808|gb|EJA13703.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392762023|gb|EJA18839.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392772788|gb|EJA29485.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392773861|gb|EJA30557.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392775156|gb|EJA31851.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392787241|gb|EJA43789.1| helicase [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392793574|gb|EJA50018.1| helicase [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392800711|gb|EJA56941.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392802201|gb|EJA58415.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392809697|gb|EJA65731.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392809814|gb|EJA65844.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392818755|gb|EJA74639.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392824612|gb|EJA80386.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392838367|gb|EJA93931.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|414017577|gb|EKT01285.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm1]
gi|414018454|gb|EKT02106.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm8]
gi|414019936|gb|EKT03531.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm2]
gi|414032097|gb|EKT15117.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm9]
gi|414033391|gb|EKT16345.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm3]
gi|414036588|gb|EKT19409.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm4]
gi|414046489|gb|EKT28811.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm10]
gi|414047689|gb|EKT29959.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm6]
gi|414052382|gb|EKT34428.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm11]
gi|414059210|gb|EKT40802.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm12]
gi|414064662|gb|EKT45551.1| helicase [Salmonella enterica subsp. enterica serovar Typhimurium
str. STm5]
gi|444845560|gb|ELX70770.1| putative helicase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444850669|gb|ELX75766.1| putative helicase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|418857962|ref|ZP_13412585.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418862257|ref|ZP_13416801.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392834640|gb|EJA90244.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392836709|gb|EJA92289.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|418844676|ref|ZP_13399462.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392813485|gb|EJA69449.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|418789227|ref|ZP_13345014.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418796625|ref|ZP_13352316.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392760468|gb|EJA17303.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392769998|gb|EJA26726.1| putative helicase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|392402995|ref|YP_006439607.1| type III restriction protein res subunit [Turneriella parva DSM
21527]
gi|390610949|gb|AFM12101.1| type III restriction protein res subunit [Turneriella parva DSM
21527]
Length = 1046
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 6 KPSAVL----RPYQEKSLRKM---FGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALV 58
KP+ +L RP+Q++++R F + G ++ PCGAGKSL G T++ +++V
Sbjct: 170 KPAKLLPLKPRPHQQQAIRNAVTHFVTQKNSRGKLIFPCGAGKSLAGYWIANTLKVKSVV 229
Query: 59 L 59
+
Sbjct: 230 V 230
>gi|417519327|ref|ZP_12181503.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353646922|gb|EHC90188.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 583
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|417512064|ref|ZP_12176502.1| DNA or RNA helicase superfamily 2, partial [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353641042|gb|EHC85868.1| DNA or RNA helicase superfamily 2, partial [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
Length = 421
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|417476441|ref|ZP_12170960.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353640867|gb|EHC85739.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
Length = 581
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|417467218|ref|ZP_12165112.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|353629766|gb|EHC77500.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
Length = 591
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|417419619|ref|ZP_12159975.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|353619534|gb|EHC69888.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|417391955|ref|ZP_12154955.1| DNA or RNA helicase superfamily 2, partial [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353613668|gb|EHC65714.1| DNA or RNA helicase superfamily 2, partial [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
Length = 285
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|417366486|ref|ZP_12138763.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353591834|gb|EHC50000.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
Length = 569
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|417327552|ref|ZP_12112940.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353570319|gb|EHC34621.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|375002051|ref|ZP_09726391.1| DEAD/DEAH box helicase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353076739|gb|EHB42499.1| DEAD/DEAH box helicase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|416767481|ref|ZP_11869941.1| putative helicase, partial [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|323271864|gb|EGA55280.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 325
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|416750941|ref|ZP_11859946.1| putative helicase, partial [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323255133|gb|EGA38916.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
Length = 342
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|416424109|ref|ZP_11691377.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416434233|ref|ZP_11697567.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416438366|ref|ZP_11699453.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416447784|ref|ZP_11706037.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416450580|ref|ZP_11707655.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416460428|ref|ZP_11714736.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416470278|ref|ZP_11718803.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416476670|ref|ZP_11721158.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416491397|ref|ZP_11727031.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416496134|ref|ZP_11728991.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416508157|ref|ZP_11735940.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416513752|ref|ZP_11738073.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416529799|ref|ZP_11744566.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416539726|ref|ZP_11750133.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416542034|ref|ZP_11751279.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416551663|ref|ZP_11756569.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416561727|ref|ZP_11761724.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416566687|ref|ZP_11763979.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416575392|ref|ZP_11768424.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416586667|ref|ZP_11775679.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416594638|ref|ZP_11780470.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416602104|ref|ZP_11785161.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416607174|ref|ZP_11788356.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416611761|ref|ZP_11790990.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416623840|ref|ZP_11797622.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416630154|ref|ZP_11800561.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416636516|ref|ZP_11803079.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416652140|ref|ZP_11811542.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|416659384|ref|ZP_11814782.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416669171|ref|ZP_11819196.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416677157|ref|ZP_11822204.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416700940|ref|ZP_11829205.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416705438|ref|ZP_11830919.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416713693|ref|ZP_11837248.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416720180|ref|ZP_11841946.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416721614|ref|ZP_11842779.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416733898|ref|ZP_11850693.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416738807|ref|ZP_11853557.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416759786|ref|ZP_11864611.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416763246|ref|ZP_11866982.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|418484851|ref|ZP_13053841.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418496996|ref|ZP_13063421.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035318]
gi|418500361|ref|ZP_13066759.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035320]
gi|418506232|ref|ZP_13072569.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035321]
gi|418509359|ref|ZP_13075655.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418523638|ref|ZP_13089627.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008286]
gi|322615250|gb|EFY12172.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322617840|gb|EFY14736.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624565|gb|EFY21396.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626984|gb|EFY23780.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322634169|gb|EFY30905.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635638|gb|EFY32348.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640226|gb|EFY36890.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646351|gb|EFY42863.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322649318|gb|EFY45754.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656438|gb|EFY52727.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660681|gb|EFY56916.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322665696|gb|EFY61880.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322667222|gb|EFY63389.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322671227|gb|EFY67355.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675132|gb|EFY71209.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322680740|gb|EFY76775.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322686915|gb|EFY82892.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323192680|gb|EFZ77907.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323198888|gb|EFZ83987.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323205101|gb|EFZ90079.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323211197|gb|EFZ96043.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323215830|gb|EGA00573.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221863|gb|EGA06263.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323223803|gb|EGA08106.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231276|gb|EGA15391.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323233709|gb|EGA17801.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323237781|gb|EGA21841.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323245762|gb|EGA29756.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323246498|gb|EGA30477.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323252603|gb|EGA36442.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323259562|gb|EGA43197.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323266059|gb|EGA49552.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|363552202|gb|EHL36508.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363552772|gb|EHL37055.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363559806|gb|EHL43958.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363566078|gb|EHL50097.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363567332|gb|EHL51332.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363573920|gb|EHL57794.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363579523|gb|EHL63305.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366055999|gb|EHN20332.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035318]
gi|366057155|gb|EHN21459.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366065974|gb|EHN30151.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035321]
gi|366069214|gb|EHN33340.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035320]
gi|366078549|gb|EHN42550.1| putative helicase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366827240|gb|EHN54149.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|372208434|gb|EHP21929.1| helicase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008286]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|289806403|ref|ZP_06537032.1| putative ATP-dependent helicase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 207
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|213646822|ref|ZP_03376875.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 293
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|213423652|ref|ZP_03356632.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 207
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|213052310|ref|ZP_03345188.1| putative helicase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|207857657|ref|YP_002244308.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|417350188|ref|ZP_12128638.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|417384369|ref|ZP_12149766.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|421359362|ref|ZP_15809655.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 622731-39]
gi|421364066|ref|ZP_15814304.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 639016-6]
gi|421367108|ref|ZP_15817310.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 640631]
gi|421373086|ref|ZP_15823231.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-0424]
gi|421375451|ref|ZP_15825564.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-6]
gi|421382234|ref|ZP_15832285.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 485549-17]
gi|421386947|ref|ZP_15836953.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-22]
gi|421391287|ref|ZP_15841258.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-70]
gi|421395656|ref|ZP_15845592.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-26]
gi|421397904|ref|ZP_15847813.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-37]
gi|421402541|ref|ZP_15852399.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-46]
gi|421409010|ref|ZP_15858805.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-50]
gi|421411808|ref|ZP_15861572.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-1427]
gi|421418223|ref|ZP_15867929.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-2659]
gi|421422780|ref|ZP_15872448.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 78-1757]
gi|421424861|ref|ZP_15874498.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 22510-1]
gi|421433267|ref|ZP_15882835.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 8b-1]
gi|421434096|ref|ZP_15883646.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648905 5-18]
gi|421441838|ref|ZP_15891298.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 6-18]
gi|421443273|ref|ZP_15892715.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-3079]
gi|421449745|ref|ZP_15899125.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 58-6482]
gi|436609143|ref|ZP_20513704.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 22704]
gi|436751128|ref|ZP_20520156.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|436802806|ref|ZP_20525539.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS44]
gi|436809533|ref|ZP_20528913.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1882]
gi|436811942|ref|ZP_20530695.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1884]
gi|436844137|ref|ZP_20537895.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1594]
gi|436854533|ref|ZP_20544167.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1566]
gi|436855743|ref|ZP_20544868.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1580]
gi|436864244|ref|ZP_20550211.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1543]
gi|436870289|ref|ZP_20554095.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1441]
gi|436877780|ref|ZP_20558708.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1810]
gi|436886720|ref|ZP_20563140.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1558]
gi|436893502|ref|ZP_20567409.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1018]
gi|436901250|ref|ZP_20572160.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1010]
gi|436912712|ref|ZP_20578541.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1729]
gi|436920280|ref|ZP_20582876.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0895]
gi|436926617|ref|ZP_20586443.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0899]
gi|436936662|ref|ZP_20592102.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1457]
gi|436940673|ref|ZP_20594617.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1747]
gi|436946601|ref|ZP_20598128.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0968]
gi|436962015|ref|ZP_20605389.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1444]
gi|436969204|ref|ZP_20608325.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1445]
gi|436976879|ref|ZP_20612129.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1559]
gi|436989647|ref|ZP_20616654.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1565]
gi|437001059|ref|ZP_20620855.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1808]
gi|437022421|ref|ZP_20628390.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1811]
gi|437036169|ref|ZP_20633901.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0956]
gi|437044090|ref|ZP_20637043.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1455]
gi|437052125|ref|ZP_20641685.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1575]
gi|437059181|ref|ZP_20646028.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1725]
gi|437064774|ref|ZP_20648548.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1745]
gi|437077168|ref|ZP_20655376.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1791]
gi|437083581|ref|ZP_20659235.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1795]
gi|437092073|ref|ZP_20663673.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 576709]
gi|437113912|ref|ZP_20669114.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 635290-58]
gi|437122104|ref|ZP_20672141.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-16]
gi|437128613|ref|ZP_20675300.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-19]
gi|437139229|ref|ZP_20681711.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-2]
gi|437144099|ref|ZP_20684713.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-9]
gi|437151307|ref|ZP_20689184.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 629163]
gi|437162670|ref|ZP_20696232.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SE15-1]
gi|437169918|ref|ZP_20700013.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_N202]
gi|437174175|ref|ZP_20702140.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_56-3991]
gi|437182999|ref|ZP_20707397.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_76-3618]
gi|437196594|ref|ZP_20711114.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|437261896|ref|ZP_20718642.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_81-2490]
gi|437267347|ref|ZP_20721099.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SL909]
gi|437280618|ref|ZP_20727995.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SL913]
gi|437294400|ref|ZP_20732293.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_69-4941]
gi|437311840|ref|ZP_20735948.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 638970-15]
gi|437330378|ref|ZP_20741542.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 17927]
gi|437346906|ref|ZP_20747060.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS4]
gi|437410972|ref|ZP_20752748.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 22-17]
gi|437435275|ref|ZP_20756364.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 40-18]
gi|437461063|ref|ZP_20762016.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 1-1]
gi|437479689|ref|ZP_20768036.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 4-1]
gi|437494329|ref|ZP_20772358.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 642046 4-7]
gi|437505306|ref|ZP_20775360.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648898 4-5]
gi|437535264|ref|ZP_20781498.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648899 3-17]
gi|437559664|ref|ZP_20785880.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648900 1-16]
gi|437569574|ref|ZP_20787906.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 1-17]
gi|437583632|ref|ZP_20792626.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 39-2]
gi|437600033|ref|ZP_20797192.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648902 6-8]
gi|437616792|ref|ZP_20802544.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648903 1-6]
gi|437662205|ref|ZP_20813422.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 653049 13-19]
gi|437673579|ref|ZP_20816302.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 8-1]
gi|437690700|ref|ZP_20820421.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 9-7]
gi|437711791|ref|ZP_20826809.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 42-20]
gi|437730203|ref|ZP_20831129.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 16-16]
gi|437743248|ref|ZP_20833387.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|437813045|ref|ZP_20841630.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 33944]
gi|438082761|ref|ZP_20857947.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 81-2625]
gi|438099408|ref|ZP_20863424.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 62-1976]
gi|438109541|ref|ZP_20867504.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 53-407]
gi|445178147|ref|ZP_21397893.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SE8a]
gi|445215921|ref|ZP_21401986.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 20037]
gi|445236204|ref|ZP_21407054.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SE10]
gi|445335834|ref|ZP_21415538.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 18569]
gi|445347975|ref|ZP_21419493.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 13-1]
gi|445364466|ref|ZP_21424970.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. PT23]
gi|206709460|emb|CAR33801.1| putative helicase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|353570763|gb|EHC34930.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353609140|gb|EHC62532.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|395984985|gb|EJH94158.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 622731-39]
gi|395985541|gb|EJH94711.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 639016-6]
gi|395989763|gb|EJH98897.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 640631]
gi|395998714|gb|EJI07741.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-0424]
gi|395999334|gb|EJI08356.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 485549-17]
gi|396005437|gb|EJI14416.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-6]
gi|396011588|gb|EJI20498.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-22]
gi|396012295|gb|EJI21193.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-26]
gi|396012697|gb|EJI21593.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-70]
gi|396025941|gb|EJI34714.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-50]
gi|396032078|gb|EJI40803.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-46]
gi|396032100|gb|EJI40824.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-37]
gi|396039390|gb|EJI48018.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-2659]
gi|396042095|gb|EJI50718.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 78-1757]
gi|396045309|gb|EJI53903.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-1427]
gi|396049483|gb|EJI58026.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 8b-1]
gi|396058457|gb|EJI66918.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 22510-1]
gi|396060702|gb|EJI69143.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648905 5-18]
gi|396062515|gb|EJI70926.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 6-18]
gi|396068561|gb|EJI76907.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 58-6482]
gi|396071057|gb|EJI79384.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-3079]
gi|434957073|gb|ELL50747.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS44]
gi|434967350|gb|ELL60185.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1882]
gi|434970323|gb|ELL62943.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 22704]
gi|434970341|gb|ELL62953.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|434976710|gb|ELL68918.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1884]
gi|434978723|gb|ELL70715.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1594]
gi|434983336|gb|ELL75144.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1566]
gi|434991957|gb|ELL83427.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1580]
gi|434995279|gb|ELL86595.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1543]
gi|435002617|gb|ELL93682.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1441]
gi|435008664|gb|ELL99487.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1810]
gi|435011963|gb|ELM02666.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1558]
gi|435018498|gb|ELM08960.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1018]
gi|435020684|gb|ELM11073.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1010]
gi|435026957|gb|ELM17088.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1729]
gi|435027799|gb|ELM17891.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0895]
gi|435036458|gb|ELM26277.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0899]
gi|435039500|gb|ELM29281.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1457]
gi|435045578|gb|ELM35206.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1747]
gi|435051154|gb|ELM40658.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1444]
gi|435058401|gb|ELM47739.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0968]
gi|435059305|gb|ELM48595.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1445]
gi|435071214|gb|ELM60164.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1565]
gi|435071355|gb|ELM60303.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1559]
gi|435074503|gb|ELM63335.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0956]
gi|435075613|gb|ELM64427.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1808]
gi|435077049|gb|ELM65823.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1811]
gi|435081294|gb|ELM69936.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1455]
gi|435091527|gb|ELM79918.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1575]
gi|435094994|gb|ELM83333.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1725]
gi|435100516|gb|ELM88684.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1745]
gi|435104006|gb|ELM92080.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1791]
gi|435107324|gb|ELM95309.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1795]
gi|435112979|gb|ELN00844.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 576709]
gi|435116210|gb|ELN03961.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 635290-58]
gi|435124250|gb|ELN11717.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-16]
gi|435128129|gb|ELN15480.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-19]
gi|435132751|gb|ELN19949.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-2]
gi|435139090|gb|ELN26094.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-9]
gi|435142590|gb|ELN29477.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SE15-1]
gi|435145190|gb|ELN32019.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 629163]
gi|435147698|gb|ELN34450.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_N202]
gi|435158024|gb|ELN44445.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_56-3991]
gi|435162267|gb|ELN48451.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_81-2490]
gi|435163871|gb|ELN50000.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_76-3618]
gi|435170106|gb|ELN55862.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SL913]
gi|435175863|gb|ELN61265.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SL909]
gi|435179820|gb|ELN64954.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_69-4941]
gi|435182972|gb|ELN67947.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 638970-15]
gi|435189334|gb|ELN73979.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS4]
gi|435189562|gb|ELN74186.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 17927]
gi|435204177|gb|ELN87874.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 22-17]
gi|435214018|gb|ELN96870.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 40-18]
gi|435219366|gb|ELO01728.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 4-1]
gi|435220755|gb|ELO03037.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 1-1]
gi|435226233|gb|ELO07813.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|435227227|gb|ELO08736.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 642046 4-7]
gi|435235363|gb|ELO16166.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648898 4-5]
gi|435238975|gb|ELO19584.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648900 1-16]
gi|435240625|gb|ELO21016.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648899 3-17]
gi|435250307|gb|ELO30045.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 1-17]
gi|435261520|gb|ELO40674.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648903 1-6]
gi|435262951|gb|ELO42033.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648902 6-8]
gi|435263530|gb|ELO42577.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 39-2]
gi|435267851|gb|ELO46516.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 653049 13-19]
gi|435279029|gb|ELO56849.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 8-1]
gi|435281447|gb|ELO59118.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 9-7]
gi|435288011|gb|ELO65102.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 42-20]
gi|435289464|gb|ELO66424.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 16-16]
gi|435297127|gb|ELO73422.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 33944]
gi|435312871|gb|ELO86688.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|435320419|gb|ELO93058.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 81-2625]
gi|435325962|gb|ELO97806.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 62-1976]
gi|435332690|gb|ELP03601.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 53-407]
gi|444855275|gb|ELX80323.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SE8a]
gi|444858841|gb|ELX83813.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 20037]
gi|444859247|gb|ELX84199.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. SE10]
gi|444874391|gb|ELX98645.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 18569]
gi|444876507|gb|ELY00676.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. 13-1]
gi|444883217|gb|ELY07115.1| helicase [Salmonella enterica subsp. enterica serovar Enteritidis
str. PT23]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|205353356|ref|YP_002227157.1| helicase [Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|375124195|ref|ZP_09769359.1| putative helicase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378954416|ref|YP_005211903.1| putative helicase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|438145988|ref|ZP_20875900.1| helicase [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|445128504|ref|ZP_21380297.1| putative helicase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|205273137|emb|CAR38094.1| putative helicase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326628445|gb|EGE34788.1| putative helicase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|357205027|gb|AET53073.1| putative helicase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|434938731|gb|ELL45658.1| helicase [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|444854966|gb|ELX80021.1| putative helicase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|200387222|ref|ZP_03213834.1| putative helicase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|199604320|gb|EDZ02865.1| putative helicase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|168261758|ref|ZP_02683731.1| putative helicase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|205349549|gb|EDZ36180.1| putative helicase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|168242329|ref|ZP_02667261.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194447719|ref|YP_002046278.1| helicase [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|386592034|ref|YP_006088434.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|419728257|ref|ZP_14255223.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419736440|ref|ZP_14263280.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419741003|ref|ZP_14267715.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419745229|ref|ZP_14271872.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419749930|ref|ZP_14276401.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421571430|ref|ZP_16017107.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421574386|ref|ZP_16020007.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421580004|ref|ZP_16025566.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421585665|ref|ZP_16031157.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|194406023|gb|ACF66242.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205338431|gb|EDZ25195.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|381291749|gb|EIC32978.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381292947|gb|EIC34120.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381299794|gb|EIC40862.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381306653|gb|EIC47526.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381308002|gb|EIC48847.1| putative helicase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383799078|gb|AFH46160.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|402520655|gb|EJW27996.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402521479|gb|EJW28817.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402524586|gb|EJW31883.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402529515|gb|EJW36748.1| DNA or RNA helicase of superfamily II [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|204929079|ref|ZP_03220222.1| putative helicase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|452119572|ref|YP_007469820.1| helicase [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|204321623|gb|EDZ06822.1| putative helicase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|451908576|gb|AGF80382.1| helicase [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|197251075|ref|YP_002147196.1| helicase [Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|440763135|ref|ZP_20942182.1| helicase [Salmonella enterica subsp. enterica serovar Agona str.
SH11G1113]
gi|440769287|ref|ZP_20948247.1| helicase [Salmonella enterica subsp. enterica serovar Agona str.
SH08SF124]
gi|440771431|ref|ZP_20950349.1| helicase [Salmonella enterica subsp. enterica serovar Agona str.
SH10GFN094]
gi|197214778|gb|ACH52175.1| putative helicase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|436415275|gb|ELP13196.1| helicase [Salmonella enterica subsp. enterica serovar Agona str.
SH08SF124]
gi|436421064|gb|ELP18915.1| helicase [Salmonella enterica subsp. enterica serovar Agona str.
SH11G1113]
gi|436421777|gb|ELP19620.1| helicase [Salmonella enterica subsp. enterica serovar Agona str.
SH10GFN094]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|168236411|ref|ZP_02661469.1| putative helicase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737347|ref|YP_002115313.1| helicase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|417359461|ref|ZP_12133833.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|417532344|ref|ZP_12186755.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|418514052|ref|ZP_13080269.1| putative helicase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|194712849|gb|ACF92070.1| putative helicase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290640|gb|EDY29995.1| putative helicase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|353589530|gb|EHC48299.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|353662965|gb|EHD01801.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|366080459|gb|EHN44429.1| putative helicase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|168229595|ref|ZP_02654653.1| putative helicase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194470303|ref|ZP_03076287.1| putative helicase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194456667|gb|EDX45506.1| putative helicase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205335643|gb|EDZ22407.1| putative helicase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|161613069|ref|YP_001587034.1| hypothetical protein SPAB_00777 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161362433|gb|ABX66201.1| hypothetical protein SPAB_00777 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|161502617|ref|YP_001569729.1| hypothetical protein SARI_00664 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160863964|gb|ABX20587.1| hypothetical protein SARI_00664 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 586
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|365834082|ref|ZP_09375531.1| helicase protein [Hafnia alvei ATCC 51873]
gi|364570423|gb|EHM48035.1| helicase protein [Hafnia alvei ATCC 51873]
Length = 586
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ +++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQREAVEATIAHFRKHQEPAVIVLPTGAGKSLVIAELAKLARGRVLVLAH 57
>gi|157144863|ref|YP_001452182.1| hypothetical protein CKO_00592 [Citrobacter koseri ATCC BAA-895]
gi|157082068|gb|ABV11746.1| hypothetical protein CKO_00592 [Citrobacter koseri ATCC BAA-895]
Length = 586
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|417231844|ref|ZP_12033242.1| type III restriction enzyme, res subunit [Escherichia coli
5.0959]
gi|386204843|gb|EII09354.1| type III restriction enzyme, res subunit [Escherichia coli
5.0959]
Length = 586
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDSTLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|441509457|ref|ZP_20991375.1| hypothetical protein GOACH_11_01330 [Gordonia aichiensis NBRC
108223]
gi|441446555|dbj|GAC49336.1| hypothetical protein GOACH_11_01330 [Gordonia aichiensis NBRC
108223]
Length = 963
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKR---ALVL 59
LRP+Q ++ +K GR SGVI GAGK+ VG+ A R+R ALVL
Sbjct: 73 LRPWQVEAFQKWLAAGR--SGVIEAVTGAGKTDVGIAAIAEARRRGVPALVL 122
>gi|378580353|ref|ZP_09829011.1| putative ATP-dependet helicase [Pantoea stewartii subsp.
stewartii DC283]
gi|377817162|gb|EHU00260.1| putative ATP-dependet helicase [Pantoea stewartii subsp.
stewartii DC283]
Length = 584
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 8 SAVLRPYQEKSLRKMFGNGRA--RSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
S LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 2 SFTLRPYQQEAVDATVAHFRRHHEPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|372270142|ref|ZP_09506190.1| type III restriction enzyme, res subunit [Marinobacterium
stanieri S30]
Length = 591
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 1 MTIDLKPSAVLRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALV 58
M P+ LR YQ+ ++ + RA VIVLP GAGKSLV R+R LV
Sbjct: 1 MPAQTPPAFTLRDYQQDAVTATLKHFRASDDPAVIVLPTGAGKSLVIAELARLARRRILV 60
Query: 59 L 59
+
Sbjct: 61 I 61
>gi|397170790|ref|ZP_10494200.1| type III restriction enzyme, res subunit [Alishewanella aestuarii
B11]
gi|396087264|gb|EJI84864.1| type III restriction enzyme, res subunit [Alishewanella aestuarii
B11]
Length = 577
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ+++++ + + R S VIVLP GAGKSLV R R LVL
Sbjct: 4 LRDYQQQAVQAAISHFKQRDESAVIVLPTGAGKSLVIAELARRARGRVLVL 54
>gi|375109215|ref|ZP_09755465.1| type III restriction enzyme, res subunit [Alishewanella jeotgali
KCTC 22429]
gi|374570774|gb|EHR41907.1| type III restriction enzyme, res subunit [Alishewanella jeotgali
KCTC 22429]
Length = 577
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 11 LRPYQEKSLRKMFGNGRAR--SGVIVLPCGAGKSLVGVTACCTVRKRALVL 59
LR YQ+++++ + + R S VIVLP GAGKSLV R R LVL
Sbjct: 4 LRDYQQQAVQAAISHFKQRDESAVIVLPTGAGKSLVIAELARRARGRVLVL 54
>gi|117923959|ref|YP_864576.1| type III restriction enzyme, res subunit [Magnetococcus marinus
MC-1]
gi|117607715|gb|ABK43170.1| type III restriction enzyme, res subunit [Magnetococcus marinus
MC-1]
Length = 462
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 12 RPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALV 58
RP+Q+ +++K N +GV+VLP G+GKSLV A VR+ L+
Sbjct: 77 RPHQQIAIQKWAENNH--TGVVVLPTGSGKSLVARLAMQRVRRNTLI 121
>gi|336324825|ref|YP_004604791.1| putative ATP-dependent DNA helicase [Corynebacterium resistens
DSM 45100]
gi|336100807|gb|AEI08627.1| putative ATP-dependent DNA helicase [Corynebacterium resistens
DSM 45100]
Length = 335
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 30 SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
SGV+VLPCGAGK++VG + + L+L + V
Sbjct: 11 SGVVVLPCGAGKTMVGAASMAKAKATTLILVTNTV 45
>gi|218884540|ref|YP_002428922.1| Putative DNA repair helicase [Desulfurococcus kamchatkensis 1221n]
gi|218766156|gb|ACL11555.1| Putative DNA repair helicase [Desulfurococcus kamchatkensis 1221n]
Length = 553
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 2 TIDLKP---SAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALV 58
++ +KP + LR YQ ++L K N G+I LP G+GK+L+GV A R+L+
Sbjct: 157 SLQVKPELRNIALRDYQREALSKWVENNY--RGIIALPTGSGKTLIGVAAIIEKAVRSLI 214
Query: 59 L 59
+
Sbjct: 215 I 215
>gi|324998370|ref|ZP_08119482.1| DNA/RNA helicase, superfamily II [Pseudonocardia sp. P1]
Length = 553
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGV 64
LR YQ++++ + G SGV+VLPCGAGK+LVG A L+L + V
Sbjct: 182 LRDYQQQAVDGFWDGG---SGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTV 232
>gi|323494538|ref|ZP_08099643.1| helicase-like protein [Vibrio brasiliensis LMG 20546]
gi|323311265|gb|EGA64424.1| helicase-like protein [Vibrio brasiliensis LMG 20546]
Length = 579
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + + R S V+VLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHHFRQHSTPAVLVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|183599527|ref|ZP_02961020.1| hypothetical protein PROSTU_03006 [Providencia stuartii ATCC
25827]
gi|386741777|ref|YP_006214956.1| ATP-dependent helicase with nucleoside triP hydrolase domain
[Providencia stuartii MRSN 2154]
gi|188021774|gb|EDU59814.1| helicase C-terminal domain protein [Providencia stuartii ATCC
25827]
gi|384478470|gb|AFH92265.1| ATP-dependent helicase with nucleoside triP hydrolase domain
[Providencia stuartii MRSN 2154]
Length = 586
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 10 VLRPYQEKSLRKM--FGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
VLRPYQ++++ + + VIVLP GAGKSLV R R LVL +
Sbjct: 4 VLRPYQQEAVDATVRYFRQHTQPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|451971760|ref|ZP_21924976.1| helicase-like protein [Vibrio alginolyticus E0666]
gi|451932296|gb|EMD79974.1| helicase-like protein [Vibrio alginolyticus E0666]
Length = 533
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|28897988|ref|NP_797593.1| helicase-like protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260877144|ref|ZP_05889499.1| DNA or RNA helicase [Vibrio parahaemolyticus AN-5034]
gi|417320093|ref|ZP_12106639.1| helicase-like protein [Vibrio parahaemolyticus 10329]
gi|433657428|ref|YP_007274807.1| DNA or RNA helicase of superfamily II [Vibrio parahaemolyticus
BB22OP]
gi|28806202|dbj|BAC59477.1| helicase-related protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308093684|gb|EFO43379.1| DNA or RNA helicase [Vibrio parahaemolyticus AN-5034]
gi|328473056|gb|EGF43904.1| helicase-like protein [Vibrio parahaemolyticus 10329]
gi|432508116|gb|AGB09633.1| DNA or RNA helicase of superfamily II [Vibrio parahaemolyticus
BB22OP]
Length = 583
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|424045420|ref|ZP_17782985.1| type III restriction enzyme, res subunit [Vibrio cholerae
HENC-03]
gi|408886470|gb|EKM25144.1| type III restriction enzyme, res subunit [Vibrio cholerae
HENC-03]
Length = 584
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|417374503|ref|ZP_12144242.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353599353|gb|EHC55551.1| DNA or RNA helicase superfamily 2 [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
Length = 586
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHLRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAH 57
>gi|350531766|ref|ZP_08910707.1| hypothetical protein VrotD_11601 [Vibrio rotiferianus DAT722]
Length = 583
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|308125721|ref|ZP_07663496.1| DNA or RNA helicase [Vibrio parahaemolyticus K5030]
gi|308111870|gb|EFO49410.1| DNA or RNA helicase [Vibrio parahaemolyticus K5030]
Length = 461
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|269968138|ref|ZP_06182173.1| helicase-related protein [Vibrio alginolyticus 40B]
gi|269827269|gb|EEZ81568.1| helicase-related protein [Vibrio alginolyticus 40B]
Length = 583
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|262394553|ref|YP_003286407.1| helicase-like protein [Vibrio sp. Ex25]
gi|262338147|gb|ACY51942.1| helicase-related protein [Vibrio sp. Ex25]
Length = 583
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|153838609|ref|ZP_01991276.1| DNA or RNA helicase [Vibrio parahaemolyticus AQ3810]
gi|149747981|gb|EDM58841.1| DNA or RNA helicase [Vibrio parahaemolyticus AQ3810]
Length = 461
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|260772945|ref|ZP_05881861.1| helicase-related protein [Vibrio metschnikovii CIP 69.14]
gi|260612084|gb|EEX37287.1| helicase-related protein [Vibrio metschnikovii CIP 69.14]
Length = 579
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ S++ + R S VIVLP GAGKSLV + R LVL +
Sbjct: 4 LRPYQADSVKAVIHYFRQHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAH 56
>gi|417342443|ref|ZP_12123258.1| DNA or RNA helicase superfamily 2, partial [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|357956638|gb|EHJ81981.1| DNA or RNA helicase superfamily 2, partial [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 404
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARIARGRVLVLAH 57
>gi|390960508|ref|YP_006424342.1| putative DNA/RNA repair helicase [Thermococcus sp. CL1]
gi|390518816|gb|AFL94548.1| putative DNA/RNA repair helicase [Thermococcus sp. CL1]
Length = 464
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 11 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNS 62
LR YQE+++RK R + GV+ LP G+GK++VG+ + AL++ ++
Sbjct: 95 LRKYQERAVRKAL---REKMGVLALPVGSGKTVVGLRIIHELDLSALIVVHT 143
>gi|433092577|ref|ZP_20278844.1| ATP-dependent helicase [Escherichia coli KTE138]
gi|431609907|gb|ELI79212.1| ATP-dependent helicase [Escherichia coli KTE138]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432862780|ref|ZP_20087069.1| ATP-dependent helicase [Escherichia coli KTE146]
gi|431404819|gb|ELG88065.1| ATP-dependent helicase [Escherichia coli KTE146]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432815924|ref|ZP_20049708.1| ATP-dependent helicase [Escherichia coli KTE115]
gi|431364148|gb|ELG50692.1| ATP-dependent helicase [Escherichia coli KTE115]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432802403|ref|ZP_20036382.1| ATP-dependent helicase [Escherichia coli KTE84]
gi|431348192|gb|ELG35050.1| ATP-dependent helicase [Escherichia coli KTE84]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432692158|ref|ZP_19927387.1| ATP-dependent helicase [Escherichia coli KTE161]
gi|431226952|gb|ELF24102.1| ATP-dependent helicase [Escherichia coli KTE161]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432675301|ref|ZP_19910761.1| ATP-dependent helicase [Escherichia coli KTE142]
gi|431214277|gb|ELF12102.1| ATP-dependent helicase [Escherichia coli KTE142]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432617254|ref|ZP_19853369.1| ATP-dependent helicase [Escherichia coli KTE75]
gi|431154195|gb|ELE55017.1| ATP-dependent helicase [Escherichia coli KTE75]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432602746|ref|ZP_19838990.1| ATP-dependent helicase [Escherichia coli KTE66]
gi|431141320|gb|ELE43085.1| ATP-dependent helicase [Escherichia coli KTE66]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432554274|ref|ZP_19790997.1| ATP-dependent helicase [Escherichia coli KTE47]
gi|431084079|gb|ELD90250.1| ATP-dependent helicase [Escherichia coli KTE47]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432489862|ref|ZP_19731736.1| ATP-dependent helicase [Escherichia coli KTE213]
gi|432771148|ref|ZP_20005487.1| ATP-dependent helicase [Escherichia coli KTE50]
gi|432839870|ref|ZP_20073356.1| ATP-dependent helicase [Escherichia coli KTE140]
gi|432962354|ref|ZP_20152007.1| ATP-dependent helicase [Escherichia coli KTE202]
gi|433063648|ref|ZP_20250571.1| ATP-dependent helicase [Escherichia coli KTE125]
gi|433203803|ref|ZP_20387579.1| ATP-dependent helicase [Escherichia coli KTE95]
gi|431020479|gb|ELD33824.1| ATP-dependent helicase [Escherichia coli KTE213]
gi|431314845|gb|ELG02777.1| ATP-dependent helicase [Escherichia coli KTE50]
gi|431389043|gb|ELG72758.1| ATP-dependent helicase [Escherichia coli KTE140]
gi|431474145|gb|ELH53967.1| ATP-dependent helicase [Escherichia coli KTE202]
gi|431581642|gb|ELI54089.1| ATP-dependent helicase [Escherichia coli KTE125]
gi|431721352|gb|ELJ85347.1| ATP-dependent helicase [Escherichia coli KTE95]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432466278|ref|ZP_19708367.1| ATP-dependent helicase [Escherichia coli KTE205]
gi|432584441|ref|ZP_19820835.1| ATP-dependent helicase [Escherichia coli KTE57]
gi|433073377|ref|ZP_20260032.1| ATP-dependent helicase [Escherichia coli KTE129]
gi|433120783|ref|ZP_20306455.1| ATP-dependent helicase [Escherichia coli KTE157]
gi|433183849|ref|ZP_20368100.1| ATP-dependent helicase [Escherichia coli KTE85]
gi|430993862|gb|ELD10206.1| ATP-dependent helicase [Escherichia coli KTE205]
gi|431115800|gb|ELE19294.1| ATP-dependent helicase [Escherichia coli KTE57]
gi|431588088|gb|ELI59436.1| ATP-dependent helicase [Escherichia coli KTE129]
gi|431642384|gb|ELJ10107.1| ATP-dependent helicase [Escherichia coli KTE157]
gi|431706411|gb|ELJ70982.1| ATP-dependent helicase [Escherichia coli KTE85]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432432473|ref|ZP_19674902.1| ATP-dependent helicase [Escherichia coli KTE187]
gi|432845155|ref|ZP_20077988.1| ATP-dependent helicase [Escherichia coli KTE141]
gi|433208360|ref|ZP_20392034.1| ATP-dependent helicase [Escherichia coli KTE97]
gi|430952898|gb|ELC71812.1| ATP-dependent helicase [Escherichia coli KTE187]
gi|431394577|gb|ELG78110.1| ATP-dependent helicase [Escherichia coli KTE141]
gi|431729645|gb|ELJ93264.1| ATP-dependent helicase [Escherichia coli KTE97]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432407241|ref|ZP_19649950.1| ATP-dependent helicase [Escherichia coli KTE28]
gi|430930000|gb|ELC50509.1| ATP-dependent helicase [Escherichia coli KTE28]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432398013|ref|ZP_19640794.1| ATP-dependent helicase [Escherichia coli KTE25]
gi|432723637|ref|ZP_19958557.1| ATP-dependent helicase [Escherichia coli KTE17]
gi|432728224|ref|ZP_19963103.1| ATP-dependent helicase [Escherichia coli KTE18]
gi|432741918|ref|ZP_19976637.1| ATP-dependent helicase [Escherichia coli KTE23]
gi|432991225|ref|ZP_20179889.1| ATP-dependent helicase [Escherichia coli KTE217]
gi|433111436|ref|ZP_20297301.1| ATP-dependent helicase [Escherichia coli KTE150]
gi|430916117|gb|ELC37195.1| ATP-dependent helicase [Escherichia coli KTE25]
gi|431266191|gb|ELF57753.1| ATP-dependent helicase [Escherichia coli KTE17]
gi|431273913|gb|ELF64987.1| ATP-dependent helicase [Escherichia coli KTE18]
gi|431283609|gb|ELF74468.1| ATP-dependent helicase [Escherichia coli KTE23]
gi|431495307|gb|ELH74893.1| ATP-dependent helicase [Escherichia coli KTE217]
gi|431628740|gb|ELI97116.1| ATP-dependent helicase [Escherichia coli KTE150]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|432372862|ref|ZP_19615903.1| ATP-dependent helicase [Escherichia coli KTE11]
gi|430896001|gb|ELC18252.1| ATP-dependent helicase [Escherichia coli KTE11]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|405911|gb|AAA16381.1| yejH [Escherichia coli]
Length = 403
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|82544598|ref|YP_408545.1| ATP-dependent helicase [Shigella boydii Sb227]
gi|81246009|gb|ABB66717.1| putative ATP-dependent helicase [Shigella boydii Sb227]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|74312705|ref|YP_311124.1| ATP-dependent helicase [Shigella sonnei Ss046]
gi|383179146|ref|YP_005457151.1| ATP-dependent helicase [Shigella sonnei 53G]
gi|415844555|ref|ZP_11524297.1| type III restriction enzyme, res subunit [Shigella sonnei 53G]
gi|418266571|ref|ZP_12886052.1| type III restriction enzyme, res subunit [Shigella sonnei str.
Moseley]
gi|420359254|ref|ZP_14860228.1| type III restriction enzyme, res subunit [Shigella sonnei
3226-85]
gi|420363880|ref|ZP_14864764.1| type III restriction enzyme, res subunit [Shigella sonnei
4822-66]
gi|73856182|gb|AAZ88889.1| putative ATP-dependent helicase [Shigella sonnei Ss046]
gi|323168667|gb|EFZ54347.1| type III restriction enzyme, res subunit [Shigella sonnei 53G]
gi|391281935|gb|EIQ40572.1| type III restriction enzyme, res subunit [Shigella sonnei
3226-85]
gi|391294124|gb|EIQ52377.1| type III restriction enzyme, res subunit [Shigella sonnei
4822-66]
gi|397899396|gb|EJL15770.1| type III restriction enzyme, res subunit [Shigella sonnei str.
Moseley]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|26248567|ref|NP_754607.1| hypothetical protein c2721 [Escherichia coli CFT073]
gi|91211474|ref|YP_541460.1| hypothetical protein UTI89_C2461 [Escherichia coli UTI89]
gi|117624382|ref|YP_853295.1| ATP-dependet helicase [Escherichia coli APEC O1]
gi|218559105|ref|YP_002392018.1| nucleic acid ATP-dependent helicase [Escherichia coli S88]
gi|222156940|ref|YP_002557079.1| hypothetical protein LF82_3029 [Escherichia coli LF82]
gi|237704657|ref|ZP_04535138.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300982904|ref|ZP_07176368.1| DEAD/DEAH box helicase [Escherichia coli MS 45-1]
gi|301048924|ref|ZP_07195917.1| DEAD/DEAH box helicase [Escherichia coli MS 185-1]
gi|386600066|ref|YP_006101572.1| putative helicase [Escherichia coli IHE3034]
gi|386603791|ref|YP_006110091.1| putative nucleic acid ATP-dependent helicase [Escherichia coli
UM146]
gi|386629978|ref|YP_006149698.1| hypothetical protein i02_2521 [Escherichia coli str. 'clone D
i2']
gi|386634898|ref|YP_006154617.1| hypothetical protein i14_2521 [Escherichia coli str. 'clone D
i14']
gi|386639761|ref|YP_006106559.1| ATP-dependent helicase YejH [Escherichia coli ABU 83972]
gi|387617543|ref|YP_006120565.1| putative nucleic acid ATP-dependent helicase [Escherichia coli
O83:H1 str. NRG 857C]
gi|417085451|ref|ZP_11952879.1| hypothetical protein i01_03018 [Escherichia coli cloneA_i1]
gi|417286364|ref|ZP_12073653.1| type III restriction enzyme, res subunit [Escherichia coli
TW07793]
gi|419947115|ref|ZP_14463477.1| putative nucleic acid ATP-dependent helicase [Escherichia coli
HM605]
gi|422360378|ref|ZP_16441012.1| DEAD/DEAH box helicase [Escherichia coli MS 110-3]
gi|422362740|ref|ZP_16443292.1| DEAD/DEAH box helicase [Escherichia coli MS 153-1]
gi|422749465|ref|ZP_16803377.1| type III restriction enzyme [Escherichia coli H252]
gi|422755610|ref|ZP_16809434.1| type III restriction enzyme [Escherichia coli H263]
gi|422837760|ref|ZP_16885733.1| hypothetical protein ESPG_00419 [Escherichia coli H397]
gi|432358530|ref|ZP_19601756.1| ATP-dependent helicase [Escherichia coli KTE4]
gi|432363263|ref|ZP_19606430.1| ATP-dependent helicase [Escherichia coli KTE5]
gi|432412398|ref|ZP_19655061.1| ATP-dependent helicase [Escherichia coli KTE39]
gi|432436911|ref|ZP_19679299.1| ATP-dependent helicase [Escherichia coli KTE188]
gi|432441681|ref|ZP_19684021.1| ATP-dependent helicase [Escherichia coli KTE189]
gi|432446795|ref|ZP_19689094.1| ATP-dependent helicase [Escherichia coli KTE191]
gi|432496293|ref|ZP_19738089.1| ATP-dependent helicase [Escherichia coli KTE214]
gi|432505014|ref|ZP_19746738.1| ATP-dependent helicase [Escherichia coli KTE220]
gi|432524383|ref|ZP_19761511.1| ATP-dependent helicase [Escherichia coli KTE230]
gi|432569265|ref|ZP_19805777.1| ATP-dependent helicase [Escherichia coli KTE53]
gi|432574265|ref|ZP_19810745.1| ATP-dependent helicase [Escherichia coli KTE55]
gi|432588513|ref|ZP_19824869.1| ATP-dependent helicase [Escherichia coli KTE58]
gi|432593451|ref|ZP_19829768.1| ATP-dependent helicase [Escherichia coli KTE60]
gi|432598172|ref|ZP_19834448.1| ATP-dependent helicase [Escherichia coli KTE62]
gi|432608072|ref|ZP_19844257.1| ATP-dependent helicase [Escherichia coli KTE67]
gi|432651740|ref|ZP_19887494.1| ATP-dependent helicase [Escherichia coli KTE87]
gi|432755000|ref|ZP_19989550.1| ATP-dependent helicase [Escherichia coli KTE22]
gi|432779125|ref|ZP_20013368.1| ATP-dependent helicase [Escherichia coli KTE59]
gi|432784133|ref|ZP_20018312.1| ATP-dependent helicase [Escherichia coli KTE63]
gi|432788072|ref|ZP_20022204.1| ATP-dependent helicase [Escherichia coli KTE65]
gi|432821521|ref|ZP_20055213.1| ATP-dependent helicase [Escherichia coli KTE118]
gi|432827653|ref|ZP_20061305.1| ATP-dependent helicase [Escherichia coli KTE123]
gi|432974333|ref|ZP_20163172.1| ATP-dependent helicase [Escherichia coli KTE209]
gi|432995921|ref|ZP_20184526.1| ATP-dependent helicase [Escherichia coli KTE218]
gi|433000490|ref|ZP_20189015.1| ATP-dependent helicase [Escherichia coli KTE223]
gi|433005643|ref|ZP_20194072.1| ATP-dependent helicase [Escherichia coli KTE227]
gi|433008226|ref|ZP_20196643.1| ATP-dependent helicase [Escherichia coli KTE229]
gi|433014450|ref|ZP_20202798.1| ATP-dependent helicase [Escherichia coli KTE104]
gi|433024068|ref|ZP_20212056.1| ATP-dependent helicase [Escherichia coli KTE106]
gi|433087865|ref|ZP_20274236.1| ATP-dependent helicase [Escherichia coli KTE137]
gi|433116119|ref|ZP_20301910.1| ATP-dependent helicase [Escherichia coli KTE153]
gi|433125769|ref|ZP_20311328.1| ATP-dependent helicase [Escherichia coli KTE160]
gi|433139838|ref|ZP_20325094.1| ATP-dependent helicase [Escherichia coli KTE167]
gi|433149755|ref|ZP_20334776.1| ATP-dependent helicase [Escherichia coli KTE174]
gi|433154305|ref|ZP_20339248.1| ATP-dependent helicase [Escherichia coli KTE176]
gi|433164060|ref|ZP_20348798.1| ATP-dependent helicase [Escherichia coli KTE179]
gi|433169165|ref|ZP_20353793.1| ATP-dependent helicase [Escherichia coli KTE180]
gi|433198820|ref|ZP_20382722.1| ATP-dependent helicase [Escherichia coli KTE94]
gi|433213096|ref|ZP_20396686.1| ATP-dependent helicase [Escherichia coli KTE99]
gi|433323661|ref|ZP_20400992.1| putative nucleic acid ATP-dependent helicase [Escherichia coli
J96]
gi|442607939|ref|ZP_21022699.1| hypothetical protein [Escherichia coli Nissle 1917]
gi|26108972|gb|AAN81175.1|AE016763_134 Hypothetical protein yejH [Escherichia coli CFT073]
gi|91073048|gb|ABE07929.1| hypothetical protein YejH [Escherichia coli UTI89]
gi|115513506|gb|ABJ01581.1| putative ATP-dependet helicase [Escherichia coli APEC O1]
gi|218365874|emb|CAR03615.1| putative nucleic acid ATP-dependent helicase [Escherichia coli
S88]
gi|222033945|emb|CAP76686.1| Uncharacterized protein yejH [Escherichia coli LF82]
gi|226901023|gb|EEH87282.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294490952|gb|ADE89708.1| putative helicase [Escherichia coli IHE3034]
gi|300299300|gb|EFJ55685.1| DEAD/DEAH box helicase [Escherichia coli MS 185-1]
gi|300408704|gb|EFJ92242.1| DEAD/DEAH box helicase [Escherichia coli MS 45-1]
gi|307554253|gb|ADN47028.1| ATP-dependent helicase YejH [Escherichia coli ABU 83972]
gi|307626275|gb|ADN70579.1| putative nucleic acid ATP-dependent helicase [Escherichia coli
UM146]
gi|312946804|gb|ADR27631.1| putative nucleic acid ATP-dependent helicase [Escherichia coli
O83:H1 str. NRG 857C]
gi|315285740|gb|EFU45180.1| DEAD/DEAH box helicase [Escherichia coli MS 110-3]
gi|315294446|gb|EFU53794.1| DEAD/DEAH box helicase [Escherichia coli MS 153-1]
gi|323951980|gb|EGB47854.1| type III restriction enzyme [Escherichia coli H252]
gi|323955954|gb|EGB51707.1| type III restriction enzyme [Escherichia coli H263]
gi|355351223|gb|EHG00415.1| hypothetical protein i01_03018 [Escherichia coli cloneA_i1]
gi|355420877|gb|AER85074.1| hypothetical protein i02_2521 [Escherichia coli str. 'clone D
i2']
gi|355425797|gb|AER89993.1| hypothetical protein i14_2521 [Escherichia coli str. 'clone D
i14']
gi|371610669|gb|EHN99197.1| hypothetical protein ESPG_00419 [Escherichia coli H397]
gi|386249823|gb|EII95992.1| type III restriction enzyme, res subunit [Escherichia coli
TW07793]
gi|388411552|gb|EIL71721.1| putative nucleic acid ATP-dependent helicase [Escherichia coli
HM605]
gi|430877185|gb|ELC00641.1| ATP-dependent helicase [Escherichia coli KTE4]
gi|430886482|gb|ELC09337.1| ATP-dependent helicase [Escherichia coli KTE5]
gi|430934805|gb|ELC55152.1| ATP-dependent helicase [Escherichia coli KTE39]
gi|430962242|gb|ELC80099.1| ATP-dependent helicase [Escherichia coli KTE188]
gi|430966135|gb|ELC83543.1| ATP-dependent helicase [Escherichia coli KTE189]
gi|430973068|gb|ELC90036.1| ATP-dependent helicase [Escherichia coli KTE191]
gi|431023551|gb|ELD36746.1| ATP-dependent helicase [Escherichia coli KTE214]
gi|431038108|gb|ELD49077.1| ATP-dependent helicase [Escherichia coli KTE220]
gi|431051499|gb|ELD61162.1| ATP-dependent helicase [Escherichia coli KTE230]
gi|431099979|gb|ELE04995.1| ATP-dependent helicase [Escherichia coli KTE53]
gi|431107863|gb|ELE12027.1| ATP-dependent helicase [Escherichia coli KTE55]
gi|431120846|gb|ELE23844.1| ATP-dependent helicase [Escherichia coli KTE58]
gi|431127551|gb|ELE29851.1| ATP-dependent helicase [Escherichia coli KTE60]
gi|431131039|gb|ELE33122.1| ATP-dependent helicase [Escherichia coli KTE62]
gi|431137958|gb|ELE39798.1| ATP-dependent helicase [Escherichia coli KTE67]
gi|431190187|gb|ELE89587.1| ATP-dependent helicase [Escherichia coli KTE87]
gi|431302209|gb|ELF91397.1| ATP-dependent helicase [Escherichia coli KTE22]
gi|431327278|gb|ELG14623.1| ATP-dependent helicase [Escherichia coli KTE59]
gi|431328556|gb|ELG15860.1| ATP-dependent helicase [Escherichia coli KTE63]
gi|431337789|gb|ELG24877.1| ATP-dependent helicase [Escherichia coli KTE65]
gi|431368368|gb|ELG54836.1| ATP-dependent helicase [Escherichia coli KTE118]
gi|431372902|gb|ELG58564.1| ATP-dependent helicase [Escherichia coli KTE123]
gi|431489194|gb|ELH68822.1| ATP-dependent helicase [Escherichia coli KTE209]
gi|431505481|gb|ELH84087.1| ATP-dependent helicase [Escherichia coli KTE218]
gi|431508476|gb|ELH86748.1| ATP-dependent helicase [Escherichia coli KTE223]
gi|431514630|gb|ELH92471.1| ATP-dependent helicase [Escherichia coli KTE227]
gi|431523556|gb|ELI00693.1| ATP-dependent helicase [Escherichia coli KTE229]
gi|431530548|gb|ELI07227.1| ATP-dependent helicase [Escherichia coli KTE104]
gi|431535761|gb|ELI12100.1| ATP-dependent helicase [Escherichia coli KTE106]
gi|431604376|gb|ELI73785.1| ATP-dependent helicase [Escherichia coli KTE137]
gi|431633881|gb|ELJ02143.1| ATP-dependent helicase [Escherichia coli KTE153]
gi|431645003|gb|ELJ12656.1| ATP-dependent helicase [Escherichia coli KTE160]
gi|431660151|gb|ELJ27039.1| ATP-dependent helicase [Escherichia coli KTE167]
gi|431670424|gb|ELJ36777.1| ATP-dependent helicase [Escherichia coli KTE174]
gi|431674195|gb|ELJ40378.1| ATP-dependent helicase [Escherichia coli KTE176]
gi|431687365|gb|ELJ52916.1| ATP-dependent helicase [Escherichia coli KTE179]
gi|431688017|gb|ELJ53558.1| ATP-dependent helicase [Escherichia coli KTE180]
gi|431721524|gb|ELJ85518.1| ATP-dependent helicase [Escherichia coli KTE94]
gi|431734121|gb|ELJ97522.1| ATP-dependent helicase [Escherichia coli KTE99]
gi|432347759|gb|ELL42216.1| putative nucleic acid ATP-dependent helicase [Escherichia coli
J96]
gi|441710544|emb|CCQ08676.1| hypothetical protein [Escherichia coli Nissle 1917]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
>gi|24113573|ref|NP_708083.1| ATP-dependent helicase [Shigella flexneri 2a str. 301]
gi|30063627|ref|NP_837798.1| ATP-dependent helicase [Shigella flexneri 2a str. 2457T]
gi|384543853|ref|YP_005727916.1| putative ATP-dependent helicase [Shigella flexneri 2002017]
gi|415853321|ref|ZP_11529330.1| type III restriction enzyme, res subunit [Shigella flexneri 2a
str. 2457T]
gi|417739016|ref|ZP_12387596.1| type III restriction enzyme, res subunit [Shigella flexneri
4343-70]
gi|417744057|ref|ZP_12392583.1| type III restriction enzyme, res subunit [Shigella flexneri
2930-71]
gi|24052624|gb|AAN43790.1| putative ATP-dependent helicase [Shigella flexneri 2a str. 301]
gi|30041880|gb|AAP17607.1| putative ATP-dependent helicase [Shigella flexneri 2a str. 2457T]
gi|281601639|gb|ADA74623.1| putative ATP-dependent helicase [Shigella flexneri 2002017]
gi|313651298|gb|EFS15696.1| type III restriction enzyme, res subunit [Shigella flexneri 2a
str. 2457T]
gi|332754827|gb|EGJ85192.1| type III restriction enzyme, res subunit [Shigella flexneri
4343-70]
gi|332765998|gb|EGJ96208.1| type III restriction enzyme, res subunit [Shigella flexneri
2930-71]
Length = 586
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 11 LRPYQEKSLRKMFGNGRARS--GVIVLPCGAGKSLVGVTACCTVRKRALVLCN 61
LRPYQ++++ + R VIVLP GAGKSLV R R LVL +
Sbjct: 5 LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAH 57
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.140 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 988,769,060
Number of Sequences: 23463169
Number of extensions: 32149878
Number of successful extensions: 89366
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 492
Number of HSP's that attempted gapping in prelim test: 88415
Number of HSP's gapped (non-prelim): 1374
length of query: 67
length of database: 8,064,228,071
effective HSP length: 39
effective length of query: 28
effective length of database: 7,149,164,480
effective search space: 200176605440
effective search space used: 200176605440
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)