Query psy11646
Match_columns 433
No_of_seqs 481 out of 3115
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 15:21:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dou_A Ribosomal RNA large sub 99.9 2.2E-26 7.6E-31 209.3 17.7 169 21-294 12-184 (191)
2 3gcz_A Polyprotein; flavivirus 99.9 1.3E-26 4.4E-31 217.8 3.4 105 199-309 154-262 (282)
3 3evf_A RNA-directed RNA polyme 99.9 9.7E-26 3.3E-30 211.7 4.7 105 199-309 138-245 (277)
4 3eld_A Methyltransferase; flav 99.9 6.2E-25 2.1E-29 207.5 5.5 105 199-309 145-252 (300)
5 2px2_A Genome polyprotein [con 99.9 2.9E-22 9.9E-27 185.0 8.1 133 130-291 70-226 (269)
6 3r24_A NSP16, 2'-O-methyl tran 99.8 5E-21 1.7E-25 178.7 8.7 119 164-294 142-260 (344)
7 2nyu_A Putative ribosomal RNA 99.8 1.4E-19 4.9E-24 163.7 15.9 101 200-300 96-196 (196)
8 2p35_A Trans-aconitate 2-methy 99.8 2.9E-19 1E-23 168.7 18.3 128 3-143 7-134 (259)
9 2plw_A Ribosomal RNA methyltra 99.8 3.1E-19 1.1E-23 162.3 17.4 188 24-295 12-200 (201)
10 2yqz_A Hypothetical protein TT 99.8 4.1E-18 1.4E-22 161.0 19.7 129 4-140 9-140 (263)
11 3ccf_A Cyclopropane-fatty-acyl 99.8 1.6E-18 5.6E-23 166.0 15.5 110 24-144 48-157 (279)
12 2hwk_A Helicase NSP2; rossman 99.8 6.8E-19 2.3E-23 162.9 9.8 117 166-295 179-301 (320)
13 1ej0_A FTSJ; methyltransferase 99.7 1.7E-17 5.9E-22 146.4 14.0 154 22-293 10-180 (180)
14 4gek_A TRNA (CMO5U34)-methyltr 99.7 5.7E-18 2E-22 161.1 10.8 118 19-143 57-180 (261)
15 3dtn_A Putative methyltransfer 99.7 2.1E-17 7.1E-22 153.8 14.3 178 19-206 29-210 (234)
16 4hg2_A Methyltransferase type 99.7 1E-17 3.5E-22 159.0 11.7 124 3-143 14-137 (257)
17 2p41_A Type II methyltransfera 99.7 7E-18 2.4E-22 164.0 9.0 89 201-295 148-238 (305)
18 2oxt_A Nucleoside-2'-O-methylt 99.7 1.5E-17 5.3E-22 158.4 9.7 93 201-300 140-237 (265)
19 3mgg_A Methyltransferase; NYSG 99.7 2.1E-16 7.1E-21 150.8 14.0 113 24-142 28-143 (276)
20 3dh0_A SAM dependent methyltra 99.7 2.3E-16 7.8E-21 145.1 13.3 117 23-144 27-146 (219)
21 1vl5_A Unknown conserved prote 99.7 2.8E-16 9.7E-21 148.6 13.8 113 22-142 26-141 (260)
22 2wa2_A Non-structural protein 99.7 8.8E-17 3E-21 154.0 10.1 93 201-300 148-245 (276)
23 3bus_A REBM, methyltransferase 99.7 4.2E-16 1.4E-20 148.3 13.0 122 15-143 43-168 (273)
24 3dlc_A Putative S-adenosyl-L-m 99.7 5E-16 1.7E-20 142.1 12.7 122 16-145 27-152 (219)
25 3g5l_A Putative S-adenosylmeth 99.7 9.5E-16 3.2E-20 144.3 14.9 115 22-143 33-147 (253)
26 3l8d_A Methyltransferase; stru 99.7 1.5E-15 5.2E-20 141.6 16.2 115 21-145 43-157 (242)
27 2p7i_A Hypothetical protein; p 99.7 1.4E-15 4.7E-20 141.9 15.9 106 32-147 41-147 (250)
28 3p8z_A Mtase, non-structural p 99.7 5.9E-16 2E-20 140.6 12.4 83 199-288 142-226 (267)
29 3dli_A Methyltransferase; PSI- 99.7 4E-16 1.4E-20 145.9 11.9 136 3-149 10-148 (240)
30 1pjz_A Thiopurine S-methyltran 99.7 5.2E-16 1.8E-20 141.8 12.2 114 21-141 10-140 (203)
31 2gs9_A Hypothetical protein TT 99.7 2E-14 6.8E-19 131.3 22.8 130 4-146 7-137 (211)
32 1nkv_A Hypothetical protein YJ 99.7 3.4E-16 1.2E-20 147.4 11.1 118 17-142 20-141 (256)
33 3ujc_A Phosphoethanolamine N-m 99.7 9.8E-16 3.4E-20 144.7 14.2 119 19-144 41-162 (266)
34 3pfg_A N-methyltransferase; N, 99.6 6.8E-15 2.3E-19 139.3 18.8 112 17-141 36-151 (263)
35 1xxl_A YCGJ protein; structura 99.6 1.8E-15 6.1E-20 141.5 14.2 112 24-143 12-126 (239)
36 2o57_A Putative sarcosine dime 99.6 1.7E-15 5.8E-20 146.1 14.3 121 16-143 61-189 (297)
37 3ou2_A SAM-dependent methyltra 99.6 5.1E-15 1.8E-19 135.5 16.3 112 23-144 35-149 (218)
38 3g5t_A Trans-aconitate 3-methy 99.6 1.8E-15 6.3E-20 146.2 13.5 132 3-141 10-149 (299)
39 3jwh_A HEN1; methyltransferase 99.6 2.2E-15 7.6E-20 138.5 13.4 112 24-141 20-141 (217)
40 4htf_A S-adenosylmethionine-de 99.6 3.4E-15 1.2E-19 143.2 15.0 172 20-209 56-231 (285)
41 3ege_A Putative methyltransfer 99.6 1.2E-15 4E-20 144.7 11.6 126 3-144 8-133 (261)
42 3sm3_A SAM-dependent methyltra 99.6 1.3E-15 4.3E-20 141.1 11.3 107 32-146 29-146 (235)
43 3gu3_A Methyltransferase; alph 99.6 3.2E-15 1.1E-19 143.6 14.4 116 22-143 10-128 (284)
44 3jwg_A HEN1, methyltransferase 99.6 2.3E-15 8E-20 138.5 12.7 104 32-141 28-141 (219)
45 3kkz_A Uncharacterized protein 99.6 3.4E-15 1.2E-19 141.8 14.1 116 20-143 32-152 (267)
46 3ofk_A Nodulation protein S; N 99.6 4E-15 1.4E-19 136.5 14.0 107 28-143 46-156 (216)
47 3hem_A Cyclopropane-fatty-acyl 99.6 3.7E-15 1.3E-19 144.3 14.0 122 15-146 54-188 (302)
48 3hnr_A Probable methyltransfer 99.6 4.2E-15 1.4E-19 136.6 13.4 111 25-145 37-149 (220)
49 1xtp_A LMAJ004091AAA; SGPP, st 99.6 4.8E-15 1.6E-19 139.2 13.8 117 19-142 79-198 (254)
50 3bkw_A MLL3908 protein, S-aden 99.6 6.2E-15 2.1E-19 137.4 14.3 111 25-142 35-145 (243)
51 3f4k_A Putative methyltransfer 99.6 3E-15 1E-19 141.0 11.8 115 20-142 32-151 (257)
52 1kpg_A CFA synthase;, cyclopro 99.6 6.2E-15 2.1E-19 141.4 13.9 121 15-145 46-172 (287)
53 1ve3_A Hypothetical protein PH 99.6 1.1E-14 3.9E-19 134.2 14.6 117 17-143 24-144 (227)
54 2ex4_A Adrenal gland protein A 99.6 5.3E-15 1.8E-19 138.3 12.5 120 17-143 62-187 (241)
55 3e23_A Uncharacterized protein 99.6 4.5E-15 1.5E-19 135.7 11.8 110 20-143 32-143 (211)
56 3lcc_A Putative methyl chlorid 99.6 1.3E-14 4.3E-19 135.1 15.0 113 21-143 55-173 (235)
57 3h2b_A SAM-dependent methyltra 99.6 5.5E-15 1.9E-19 134.2 12.2 112 19-144 31-144 (203)
58 2xyq_A Putative 2'-O-methyl tr 99.6 2.5E-15 8.7E-20 144.4 10.1 149 28-294 58-214 (290)
59 1vlm_A SAM-dependent methyltra 99.6 4E-14 1.4E-18 130.4 17.2 124 4-146 21-144 (219)
60 2aot_A HMT, histamine N-methyl 99.6 4.2E-15 1.4E-19 143.3 10.9 113 32-144 51-175 (292)
61 2a14_A Indolethylamine N-methy 99.6 2.9E-15 9.8E-20 142.4 9.6 109 30-142 52-198 (263)
62 2p8j_A S-adenosylmethionine-de 99.6 6.5E-15 2.2E-19 134.2 11.4 106 32-144 22-131 (209)
63 3i9f_A Putative type 11 methyl 99.6 8E-15 2.7E-19 129.3 11.5 106 26-144 10-115 (170)
64 2xvm_A Tellurite resistance pr 99.6 1.9E-14 6.5E-19 129.8 14.0 109 25-142 24-137 (199)
65 2fk8_A Methoxy mycolic acid sy 99.6 2.3E-14 8E-19 139.6 15.3 122 15-146 72-199 (318)
66 3thr_A Glycine N-methyltransfe 99.6 1.6E-15 5.4E-20 145.9 6.9 115 26-145 50-179 (293)
67 1ri5_A MRNA capping enzyme; me 99.6 3.3E-14 1.1E-18 136.6 15.8 110 31-146 62-179 (298)
68 3vc1_A Geranyl diphosphate 2-C 99.6 2E-14 7E-19 139.8 14.4 117 21-145 104-225 (312)
69 4fsd_A Arsenic methyltransfera 99.6 1.1E-14 3.7E-19 146.0 12.5 109 31-144 81-206 (383)
70 3lkz_A Non-structural protein 99.6 2.2E-14 7.5E-19 134.6 13.6 85 200-290 159-246 (321)
71 2gb4_A Thiopurine S-methyltran 99.6 1.5E-14 5.3E-19 136.7 12.8 103 32-141 67-191 (252)
72 1y8c_A S-adenosylmethionine-de 99.6 2.7E-14 9.2E-19 133.0 14.0 130 4-143 7-144 (246)
73 3p9n_A Possible methyltransfer 99.6 1.7E-14 5.7E-19 129.9 11.6 108 32-144 43-156 (189)
74 3g07_A 7SK snRNA methylphospha 99.6 8.5E-15 2.9E-19 141.3 10.2 106 33-141 46-220 (292)
75 3e05_A Precorrin-6Y C5,15-meth 99.6 6.8E-14 2.3E-18 127.4 15.6 124 23-155 30-156 (204)
76 3ocj_A Putative exported prote 99.6 1.8E-14 6E-19 139.8 12.4 110 31-146 116-232 (305)
77 4df3_A Fibrillarin-like rRNA/T 99.5 2.6E-14 9E-19 132.8 12.6 112 26-141 70-182 (233)
78 4e2x_A TCAB9; kijanose, tetron 99.5 7.8E-15 2.7E-19 148.5 9.0 119 13-143 87-210 (416)
79 3cc8_A Putative methyltransfer 99.5 4.4E-14 1.5E-18 130.1 13.3 163 22-209 22-184 (230)
80 3iv6_A Putative Zn-dependent a 99.5 3.1E-14 1.1E-18 134.9 12.5 113 21-142 33-149 (261)
81 3bxo_A N,N-dimethyltransferase 99.5 4.9E-14 1.7E-18 130.9 13.6 127 4-143 9-143 (239)
82 3orh_A Guanidinoacetate N-meth 99.5 1.2E-14 4.1E-19 136.0 9.3 115 20-140 48-169 (236)
83 2avn_A Ubiquinone/menaquinone 99.5 7.5E-14 2.6E-18 132.1 14.8 129 4-144 25-155 (260)
84 2vdw_A Vaccinia virus capping 99.5 2.9E-14 1E-18 138.3 12.3 109 33-145 48-173 (302)
85 3ggd_A SAM-dependent methyltra 99.5 2.5E-14 8.6E-19 133.8 11.3 109 32-145 55-167 (245)
86 1zx0_A Guanidinoacetate N-meth 99.5 1.3E-14 4.4E-19 135.4 9.2 114 20-141 48-170 (236)
87 1wzn_A SAM-dependent methyltra 99.5 1.3E-13 4.6E-18 129.3 16.2 116 18-142 26-146 (252)
88 2pxx_A Uncharacterized protein 99.5 6.4E-14 2.2E-18 127.7 13.5 107 32-145 41-163 (215)
89 2qe6_A Uncharacterized protein 99.5 7E-14 2.4E-18 133.8 14.1 122 20-144 63-199 (274)
90 2g72_A Phenylethanolamine N-me 99.5 2.7E-14 9.4E-19 137.3 11.1 105 33-141 71-215 (289)
91 3d2l_A SAM-dependent methyltra 99.5 7.3E-14 2.5E-18 130.1 13.7 127 3-143 7-139 (243)
92 3e8s_A Putative SAM dependent 99.5 2.6E-14 9E-19 131.3 10.3 112 24-144 43-155 (227)
93 3bgv_A MRNA CAP guanine-N7 met 99.5 5.3E-14 1.8E-18 136.9 12.9 122 20-145 19-159 (313)
94 3mti_A RRNA methylase; SAM-dep 99.5 8.9E-14 3E-18 124.4 13.2 106 31-143 20-137 (185)
95 1dus_A MJ0882; hypothetical pr 99.5 2E-13 6.8E-18 122.1 15.3 116 22-146 41-162 (194)
96 3bkx_A SAM-dependent methyltra 99.5 6.8E-14 2.3E-18 133.1 12.8 125 17-144 27-162 (275)
97 3fpf_A Mtnas, putative unchara 99.5 1.5E-13 5.2E-18 131.7 15.0 104 27-141 116-222 (298)
98 3hm2_A Precorrin-6Y C5,15-meth 99.5 8.4E-14 2.9E-18 123.3 12.2 122 22-153 14-139 (178)
99 2i62_A Nicotinamide N-methyltr 99.5 5.9E-14 2E-18 132.4 11.6 108 30-141 53-198 (265)
100 1nt2_A Fibrillarin-like PRE-rR 99.5 4.1E-14 1.4E-18 130.0 10.1 108 29-141 53-161 (210)
101 3gwz_A MMCR; methyltransferase 99.5 5.6E-13 1.9E-17 132.9 18.8 116 19-143 188-309 (369)
102 3m70_A Tellurite resistance pr 99.5 1.3E-13 4.5E-18 132.1 12.7 102 32-142 119-224 (286)
103 2kw5_A SLR1183 protein; struct 99.5 1.6E-13 5.4E-18 124.4 12.3 113 22-145 21-135 (202)
104 3dxy_A TRNA (guanine-N(7)-)-me 99.5 7.4E-14 2.5E-18 129.1 10.3 108 33-144 34-153 (218)
105 3id6_C Fibrillarin-like rRNA/T 99.5 1.1E-13 3.7E-18 128.9 11.1 129 7-141 51-181 (232)
106 3njr_A Precorrin-6Y methylase; 99.5 3.2E-13 1.1E-17 123.3 14.1 119 24-155 46-168 (204)
107 1l3i_A Precorrin-6Y methyltran 99.5 2.6E-13 8.9E-18 121.1 13.2 145 1-156 1-149 (192)
108 3g2m_A PCZA361.24; SAM-depende 99.5 1.3E-13 4.3E-18 133.3 11.9 116 20-145 70-194 (299)
109 3i53_A O-methyltransferase; CO 99.5 2.3E-13 7.7E-18 133.6 13.7 114 22-144 158-277 (332)
110 2r3s_A Uncharacterized protein 99.5 2.2E-13 7.4E-18 133.5 13.2 117 20-144 150-274 (335)
111 3cgg_A SAM-dependent methyltra 99.5 4.2E-13 1.5E-17 120.1 13.9 102 32-143 45-149 (195)
112 3lbf_A Protein-L-isoaspartate 99.5 3E-13 1E-17 123.4 13.1 110 20-143 64-176 (210)
113 2yxd_A Probable cobalt-precorr 99.5 9.2E-13 3.1E-17 116.7 15.6 124 20-158 22-148 (183)
114 3u81_A Catechol O-methyltransf 99.5 3.1E-13 1E-17 124.8 12.9 137 17-160 45-189 (221)
115 3fzg_A 16S rRNA methylase; met 99.5 2.1E-13 7E-18 121.8 10.5 112 20-140 38-151 (200)
116 3eey_A Putative rRNA methylase 99.5 3.1E-13 1.1E-17 122.1 11.7 109 31-143 20-141 (197)
117 3uwp_A Histone-lysine N-methyl 99.5 3E-13 1E-17 134.5 12.4 122 17-143 157-290 (438)
118 2ozv_A Hypothetical protein AT 99.5 8.6E-13 2.9E-17 125.2 15.1 87 27-116 30-127 (260)
119 1fbn_A MJ fibrillarin homologu 99.5 3.6E-13 1.2E-17 125.2 12.2 107 26-140 67-177 (230)
120 4dzr_A Protein-(glutamine-N5) 99.5 5.1E-14 1.7E-18 128.3 6.1 127 14-144 10-167 (215)
121 2ift_A Putative methylase HI07 99.5 1E-13 3.5E-18 126.3 8.0 106 33-144 53-166 (201)
122 3mq2_A 16S rRNA methyltransfer 99.5 5.2E-14 1.8E-18 129.4 6.1 107 31-141 25-140 (218)
123 3lpm_A Putative methyltransfer 99.4 1.3E-12 4.4E-17 123.7 15.7 107 29-140 44-175 (259)
124 3dmg_A Probable ribosomal RNA 99.4 1.1E-12 3.8E-17 131.1 15.6 128 16-151 214-350 (381)
125 1yzh_A TRNA (guanine-N(7)-)-me 99.4 7.1E-13 2.4E-17 121.6 13.0 106 32-141 40-156 (214)
126 2esr_A Methyltransferase; stru 99.4 2.4E-13 8.4E-18 120.6 9.5 126 13-145 10-142 (177)
127 3htx_A HEN1; HEN1, small RNA m 99.4 6.8E-13 2.3E-17 141.1 14.3 119 20-144 708-837 (950)
128 1x19_A CRTF-related protein; m 99.4 7.8E-13 2.7E-17 131.2 13.9 115 20-143 177-297 (359)
129 2yxe_A Protein-L-isoaspartate 99.4 1.2E-12 4.2E-17 119.8 13.8 112 21-143 65-179 (215)
130 3grz_A L11 mtase, ribosomal pr 99.4 8.9E-13 3E-17 119.9 12.8 120 17-150 46-168 (205)
131 3ckk_A TRNA (guanine-N(7)-)-me 99.4 7.3E-13 2.5E-17 123.8 12.3 108 32-143 45-170 (235)
132 2fca_A TRNA (guanine-N(7)-)-me 99.4 5.3E-13 1.8E-17 122.7 10.9 106 32-141 37-153 (213)
133 1vbf_A 231AA long hypothetical 99.4 1.2E-12 4.2E-17 121.2 13.4 111 20-144 57-168 (231)
134 2ip2_A Probable phenazine-spec 99.4 8.8E-13 3E-17 129.4 12.9 113 21-143 156-274 (334)
135 3evz_A Methyltransferase; NYSG 99.4 1.2E-12 4.1E-17 121.2 12.8 108 31-144 53-182 (230)
136 1fp1_D Isoliquiritigenin 2'-O- 99.4 8.5E-13 2.9E-17 131.6 12.6 111 19-142 194-307 (372)
137 1qzz_A RDMB, aclacinomycin-10- 99.4 6.9E-13 2.4E-17 132.1 11.9 111 23-142 172-288 (374)
138 1xdz_A Methyltransferase GIDB; 99.4 5.7E-13 2E-17 124.6 10.6 102 32-140 69-173 (240)
139 2b3t_A Protein methyltransfera 99.4 9.3E-13 3.2E-17 125.8 12.3 120 14-141 91-238 (276)
140 1dl5_A Protein-L-isoaspartate 99.4 1.6E-12 5.4E-17 126.9 13.7 112 20-142 62-176 (317)
141 3dr5_A Putative O-methyltransf 99.4 8.6E-13 2.9E-17 122.1 11.1 121 14-140 37-162 (221)
142 3mcz_A O-methyltransferase; ad 99.4 1.2E-12 4.1E-17 129.3 12.9 115 23-143 168-289 (352)
143 1p91_A Ribosomal RNA large sub 99.4 3E-12 1E-16 121.4 14.7 102 32-148 84-185 (269)
144 2fyt_A Protein arginine N-meth 99.4 1.9E-12 6.6E-17 127.6 13.8 109 22-138 53-168 (340)
145 1g8a_A Fibrillarin-like PRE-rR 99.4 2.2E-12 7.4E-17 119.3 13.0 111 26-140 66-177 (227)
146 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2E-12 6.9E-17 121.5 13.0 123 23-155 86-212 (258)
147 2fpo_A Methylase YHHF; structu 99.4 5.6E-13 1.9E-17 121.5 8.8 104 33-143 54-162 (202)
148 3giw_A Protein of unknown func 99.4 1.6E-12 5.3E-17 123.3 12.0 124 19-144 63-203 (277)
149 1jsx_A Glucose-inhibited divis 99.4 7.7E-13 2.6E-17 120.3 9.6 98 33-141 65-165 (207)
150 1i9g_A Hypothetical protein RV 99.4 1.3E-12 4.5E-17 124.6 11.6 125 22-156 88-218 (280)
151 3lst_A CALO1 methyltransferase 99.4 2.1E-12 7.2E-17 127.6 13.1 111 21-143 172-288 (348)
152 1af7_A Chemotaxis receptor met 99.4 9.6E-13 3.3E-17 125.6 10.2 105 33-140 105-251 (274)
153 3reo_A (ISO)eugenol O-methyltr 99.4 2.7E-12 9.1E-17 127.9 13.8 112 19-143 188-302 (368)
154 3r0q_C Probable protein argini 99.4 2.4E-12 8E-17 128.7 13.4 114 18-140 48-168 (376)
155 3q7e_A Protein arginine N-meth 99.4 1.4E-12 4.9E-17 129.0 11.4 100 32-139 65-171 (349)
156 3q87_B N6 adenine specific DNA 99.4 1.9E-12 6.5E-17 114.6 11.0 121 16-155 8-137 (170)
157 3m33_A Uncharacterized protein 99.4 1.1E-12 3.7E-17 121.5 9.8 104 19-138 35-139 (226)
158 2pjd_A Ribosomal RNA small sub 99.4 1.6E-12 5.4E-17 128.3 11.3 120 24-151 187-313 (343)
159 2fhp_A Methylase, putative; al 99.4 1.5E-12 5.3E-17 116.0 10.2 122 18-144 28-157 (187)
160 3g89_A Ribosomal RNA small sub 99.4 1.5E-12 5E-17 122.8 10.5 103 32-141 79-184 (249)
161 3mb5_A SAM-dependent methyltra 99.4 2.3E-12 7.8E-17 121.2 11.7 123 23-156 83-209 (255)
162 4dcm_A Ribosomal RNA large sub 99.4 3.4E-12 1.2E-16 127.4 13.5 120 25-151 214-344 (375)
163 2h00_A Methyltransferase 10 do 99.4 1.3E-12 4.6E-17 122.9 10.0 121 16-139 46-190 (254)
164 3p9c_A Caffeic acid O-methyltr 99.4 4.5E-12 1.6E-16 126.1 14.2 112 19-143 186-300 (364)
165 1yb2_A Hypothetical protein TA 99.4 1.6E-12 5.6E-17 124.1 10.5 116 24-150 101-220 (275)
166 2ipx_A RRNA 2'-O-methyltransfe 99.4 2.2E-12 7.6E-17 119.9 10.9 112 26-141 70-182 (233)
167 1u2z_A Histone-lysine N-methyl 99.4 3.6E-12 1.2E-16 128.8 13.3 117 20-141 229-359 (433)
168 3tfw_A Putative O-methyltransf 99.4 4.8E-12 1.6E-16 119.0 13.3 115 18-141 51-170 (248)
169 3sso_A Methyltransferase; macr 99.4 8.7E-13 3E-17 130.9 8.5 114 20-143 204-326 (419)
170 3dp7_A SAM-dependent methyltra 99.4 3.4E-12 1.2E-16 126.9 12.8 104 32-143 178-289 (363)
171 3bwc_A Spermidine synthase; SA 99.4 7.3E-12 2.5E-16 121.5 14.7 107 31-141 93-210 (304)
172 1tw3_A COMT, carminomycin 4-O- 99.4 2.3E-12 7.7E-17 127.7 11.3 112 23-143 173-290 (360)
173 1ws6_A Methyltransferase; stru 99.4 1E-12 3.5E-17 115.4 7.8 104 33-145 41-151 (171)
174 1fp2_A Isoflavone O-methyltran 99.3 2.3E-12 7.8E-17 127.5 10.8 100 31-143 186-290 (352)
175 3ntv_A MW1564 protein; rossman 99.3 5.2E-12 1.8E-16 117.5 12.4 115 16-140 57-175 (232)
176 3tr6_A O-methyltransferase; ce 99.3 5.2E-12 1.8E-16 116.4 12.2 116 17-141 51-174 (225)
177 1o9g_A RRNA methyltransferase; 99.3 1.7E-12 5.9E-17 122.0 9.0 121 18-141 36-214 (250)
178 3p2e_A 16S rRNA methylase; met 99.3 1.9E-12 6.4E-17 120.2 9.1 105 32-141 23-139 (225)
179 3bzb_A Uncharacterized protein 99.3 9.6E-12 3.3E-16 119.2 14.3 120 18-142 64-206 (281)
180 1jg1_A PIMT;, protein-L-isoasp 99.3 5.1E-12 1.8E-16 117.6 11.9 110 21-143 79-191 (235)
181 1i1n_A Protein-L-isoaspartate 99.3 8.3E-12 2.8E-16 115.2 13.1 102 31-143 75-184 (226)
182 3duw_A OMT, O-methyltransferas 99.3 6.6E-12 2.3E-16 115.6 12.3 116 17-141 45-167 (223)
183 2zfu_A Nucleomethylin, cerebra 99.3 2.7E-12 9.1E-17 117.5 9.2 87 32-142 66-152 (215)
184 2pbf_A Protein-L-isoaspartate 99.3 9.5E-12 3.2E-16 114.9 12.7 104 31-142 78-194 (227)
185 1g6q_1 HnRNP arginine N-methyl 99.3 7.6E-12 2.6E-16 122.7 12.2 101 31-139 36-143 (328)
186 2y1w_A Histone-arginine methyl 99.3 9.7E-12 3.3E-16 122.9 13.0 113 19-140 36-154 (348)
187 3gdh_A Trimethylguanosine synt 99.3 4.6E-13 1.6E-17 124.9 3.2 98 33-139 78-179 (241)
188 2gpy_A O-methyltransferase; st 99.3 1.2E-11 4.2E-16 114.8 11.7 115 17-141 41-160 (233)
189 1r18_A Protein-L-isoaspartate( 99.3 8.9E-12 3E-16 115.3 10.2 103 31-143 82-196 (227)
190 3b3j_A Histone-arginine methyl 99.3 1.1E-11 3.9E-16 127.4 11.8 115 17-140 142-262 (480)
191 1o54_A SAM-dependent O-methylt 99.3 1.4E-11 4.9E-16 117.5 11.5 121 24-155 103-227 (277)
192 2nxc_A L11 mtase, ribosomal pr 99.3 2.1E-11 7.3E-16 115.1 12.5 104 31-146 118-223 (254)
193 3tma_A Methyltransferase; thum 99.3 2.7E-11 9.3E-16 119.9 13.8 118 21-143 191-319 (354)
194 3adn_A Spermidine synthase; am 99.3 2.5E-11 8.5E-16 117.1 13.0 105 32-141 82-198 (294)
195 4a6d_A Hydroxyindole O-methylt 99.3 4.2E-11 1.4E-15 118.6 15.0 113 22-143 168-285 (353)
196 1ixk_A Methyltransferase; open 99.3 1.8E-11 6.1E-16 119.4 12.1 113 29-146 114-251 (315)
197 2b25_A Hypothetical protein; s 99.3 1.7E-11 5.7E-16 120.5 11.9 123 24-154 96-232 (336)
198 3r3h_A O-methyltransferase, SA 99.3 3.8E-12 1.3E-16 119.5 6.9 117 16-141 46-170 (242)
199 3hp7_A Hemolysin, putative; st 99.3 6.9E-12 2.4E-16 120.2 8.8 111 22-141 73-185 (291)
200 3c3p_A Methyltransferase; NP_9 99.3 1.2E-11 3.9E-16 113.1 10.0 114 17-141 43-160 (210)
201 1sui_A Caffeoyl-COA O-methyltr 99.3 1.4E-11 4.7E-16 115.9 10.4 117 16-141 65-190 (247)
202 2yvl_A TRMI protein, hypotheti 99.3 3.3E-11 1.1E-15 112.5 12.9 119 24-155 82-204 (248)
203 2bm8_A Cephalosporin hydroxyla 99.3 1.3E-11 4.6E-16 115.2 9.8 116 16-142 67-188 (236)
204 2pt6_A Spermidine synthase; tr 99.3 5.6E-11 1.9E-15 116.1 14.4 105 32-141 115-230 (321)
205 1nv8_A HEMK protein; class I a 99.3 1.1E-11 3.6E-16 119.2 8.9 118 15-141 105-249 (284)
206 2i7c_A Spermidine synthase; tr 99.3 9E-11 3.1E-15 112.6 15.4 107 30-141 75-192 (283)
207 2vdv_E TRNA (guanine-N(7)-)-me 99.2 3.4E-11 1.1E-15 113.0 11.9 106 32-141 48-173 (246)
208 1zg3_A Isoflavanone 4'-O-methy 99.2 1.4E-11 4.8E-16 122.1 9.8 99 32-143 192-295 (358)
209 3a27_A TYW2, uncharacterized p 99.2 3.6E-11 1.2E-15 114.7 12.3 102 31-143 117-221 (272)
210 3ajd_A Putative methyltransfer 99.2 2E-11 6.7E-16 116.6 10.4 115 29-145 79-215 (274)
211 2ld4_A Anamorsin; methyltransf 99.2 4.5E-12 1.6E-16 112.4 5.2 94 28-141 7-101 (176)
212 1uir_A Polyamine aminopropyltr 99.2 7.6E-11 2.6E-15 114.9 14.2 104 32-140 76-194 (314)
213 3c3y_A Pfomt, O-methyltransfer 99.2 3.4E-11 1.1E-15 112.5 11.2 117 16-141 56-181 (237)
214 2avd_A Catechol-O-methyltransf 99.2 4.1E-11 1.4E-15 110.7 11.7 115 18-141 57-179 (229)
215 3cbg_A O-methyltransferase; cy 99.2 3.7E-11 1.3E-15 111.8 11.0 117 16-141 58-182 (232)
216 2frn_A Hypothetical protein PH 99.2 7.9E-11 2.7E-15 112.7 13.2 100 32-143 124-227 (278)
217 2hnk_A SAM-dependent O-methylt 99.2 3.5E-11 1.2E-15 112.2 10.3 115 18-141 48-181 (239)
218 1xj5_A Spermidine synthase 1; 99.2 6E-11 2.1E-15 116.4 12.4 106 31-140 118-234 (334)
219 1inl_A Spermidine synthase; be 99.2 1.4E-10 4.8E-15 112.0 14.8 105 32-141 89-205 (296)
220 1iy9_A Spermidine synthase; ro 99.2 1.5E-10 5.2E-15 110.6 14.5 105 32-141 74-189 (275)
221 4hc4_A Protein arginine N-meth 99.2 4.5E-11 1.5E-15 118.8 10.6 99 32-139 82-187 (376)
222 1ne2_A Hypothetical protein TA 99.2 2.2E-10 7.6E-15 103.5 13.9 101 18-131 37-139 (200)
223 3opn_A Putative hemolysin; str 99.2 4.8E-11 1.7E-15 111.2 9.6 161 22-213 25-187 (232)
224 4azs_A Methyltransferase WBDD; 99.2 3.8E-11 1.3E-15 126.3 9.8 104 32-141 65-173 (569)
225 3gjy_A Spermidine synthase; AP 99.2 9.4E-11 3.2E-15 113.6 11.0 105 34-142 90-201 (317)
226 2igt_A SAM dependent methyltra 99.2 1.7E-10 5.7E-15 113.2 12.6 105 32-142 152-273 (332)
227 1mjf_A Spermidine synthase; sp 99.1 1.4E-10 4.8E-15 111.1 10.4 103 32-141 74-193 (281)
228 2yxl_A PH0851 protein, 450AA l 99.1 2.3E-10 7.8E-15 117.0 12.5 115 29-146 255-394 (450)
229 3lec_A NADB-rossmann superfami 99.1 2.6E-10 9E-15 105.5 11.5 111 22-142 12-126 (230)
230 3kr9_A SAM-dependent methyltra 99.1 4.2E-10 1.4E-14 103.9 12.7 111 22-142 6-120 (225)
231 2qm3_A Predicted methyltransfe 99.1 6.6E-10 2.3E-14 110.7 15.1 104 32-141 171-278 (373)
232 2b2c_A Spermidine synthase; be 99.1 1.4E-10 4.8E-15 112.9 9.8 105 32-141 107-222 (314)
233 2o07_A Spermidine synthase; st 99.1 1.6E-10 5.6E-15 111.9 10.1 107 30-141 92-209 (304)
234 1zq9_A Probable dimethyladenos 99.1 4.9E-10 1.7E-14 107.5 12.9 109 20-138 15-144 (285)
235 2b78_A Hypothetical protein SM 99.1 3.4E-10 1.2E-14 113.3 12.1 108 32-144 211-334 (385)
236 3gnl_A Uncharacterized protein 99.1 3.7E-10 1.3E-14 105.4 11.4 111 22-142 12-126 (244)
237 3frh_A 16S rRNA methylase; met 99.1 3.8E-10 1.3E-14 104.4 11.0 98 32-139 104-204 (253)
238 3m6w_A RRNA methylase; rRNA me 99.1 2.2E-10 7.4E-15 116.9 10.1 113 29-146 97-234 (464)
239 2frx_A Hypothetical protein YE 99.1 3.9E-10 1.3E-14 115.8 11.7 110 33-146 117-251 (479)
240 1wy7_A Hypothetical protein PH 99.1 2.1E-09 7.3E-14 97.4 15.4 108 18-138 35-146 (207)
241 3lcv_B Sisomicin-gentamicin re 99.1 3.1E-10 1.1E-14 105.9 9.7 101 32-140 131-235 (281)
242 3m4x_A NOL1/NOP2/SUN family pr 99.1 2.7E-10 9.3E-15 116.0 10.0 114 29-146 101-239 (456)
243 1sqg_A SUN protein, FMU protei 99.1 5.2E-10 1.8E-14 113.6 11.6 114 29-146 242-379 (429)
244 3tm4_A TRNA (guanine N2-)-meth 99.1 7.1E-10 2.4E-14 110.5 12.2 104 31-142 215-330 (373)
245 4dmg_A Putative uncharacterize 99.0 6.9E-10 2.4E-14 111.2 11.5 107 32-145 213-330 (393)
246 2cmg_A Spermidine synthase; tr 99.0 3.9E-10 1.3E-14 106.9 8.9 94 31-140 70-170 (262)
247 2f8l_A Hypothetical protein LM 99.0 7.5E-10 2.6E-14 109.1 10.5 121 18-142 114-257 (344)
248 3c0k_A UPF0064 protein YCCW; P 99.0 1.8E-09 6.2E-14 108.4 13.0 108 32-144 219-342 (396)
249 2h1r_A Dimethyladenosine trans 99.0 2E-09 7E-14 103.9 12.8 89 20-118 29-120 (299)
250 3v97_A Ribosomal RNA large sub 99.0 1.6E-09 5.3E-14 116.5 12.6 105 33-143 539-659 (703)
251 1qam_A ERMC' methyltransferase 99.0 1.8E-09 6E-14 101.3 11.5 102 4-117 5-107 (244)
252 2as0_A Hypothetical protein PH 99.0 1.3E-09 4.6E-14 109.4 10.3 108 32-144 216-338 (396)
253 1uwv_A 23S rRNA (uracil-5-)-me 99.0 5.1E-09 1.8E-13 106.4 14.4 117 15-141 268-389 (433)
254 1wxx_A TT1595, hypothetical pr 98.9 2.2E-09 7.5E-14 107.3 10.2 107 33-145 209-329 (382)
255 3gru_A Dimethyladenosine trans 98.9 2.5E-09 8.5E-14 102.9 10.1 91 20-118 37-128 (295)
256 3tqs_A Ribosomal RNA small sub 98.9 4.7E-09 1.6E-13 99.0 11.5 91 20-116 16-108 (255)
257 1yub_A Ermam, rRNA methyltrans 98.9 1.1E-10 3.9E-15 109.4 0.1 128 1-140 1-144 (245)
258 2ih2_A Modification methylase 98.9 2.2E-09 7.6E-14 108.2 9.5 112 20-143 26-166 (421)
259 3k6r_A Putative transferase PH 98.9 2.4E-09 8.3E-14 102.0 9.1 98 32-141 124-225 (278)
260 2yx1_A Hypothetical protein MJ 98.9 4.8E-09 1.6E-13 103.0 10.7 98 32-145 194-295 (336)
261 2okc_A Type I restriction enzy 98.8 3.9E-09 1.3E-13 107.6 8.2 119 20-142 158-308 (445)
262 3fut_A Dimethyladenosine trans 98.8 9.2E-09 3.2E-13 97.8 10.2 91 20-118 34-124 (271)
263 3ldu_A Putative methylase; str 98.8 1.7E-08 5.8E-13 100.9 12.6 119 20-142 182-345 (385)
264 3bt7_A TRNA (uracil-5-)-methyl 98.8 1.1E-08 3.9E-13 101.6 11.2 120 14-146 195-331 (369)
265 3k0b_A Predicted N6-adenine-sp 98.8 2.7E-08 9.1E-13 99.7 13.6 119 20-142 188-351 (393)
266 3ldg_A Putative uncharacterize 98.8 3.9E-08 1.3E-12 98.1 14.2 119 20-142 181-344 (384)
267 2jjq_A Uncharacterized RNA met 98.8 2.9E-08 9.8E-13 100.5 13.4 108 17-141 277-387 (425)
268 2b9e_A NOL1/NOP2/SUN domain fa 98.8 3.8E-08 1.3E-12 95.4 13.6 115 29-146 98-239 (309)
269 3ftd_A Dimethyladenosine trans 98.8 4.9E-08 1.7E-12 91.7 13.3 90 20-116 18-107 (249)
270 3b5i_A S-adenosyl-L-methionine 98.8 1.4E-08 4.7E-13 100.7 9.7 141 4-145 15-229 (374)
271 3uzu_A Ribosomal RNA small sub 98.7 3.8E-08 1.3E-12 93.9 9.7 95 20-116 29-126 (279)
272 1m6y_A S-adenosyl-methyltransf 98.7 3.6E-08 1.2E-12 95.1 9.2 91 21-114 14-108 (301)
273 1qyr_A KSGA, high level kasuga 98.7 2.6E-08 8.8E-13 93.8 7.3 92 20-116 8-102 (252)
274 2qfm_A Spermine synthase; sper 98.7 7.4E-08 2.5E-12 94.5 10.2 105 32-141 187-314 (364)
275 2efj_A 3,7-dimethylxanthine me 98.6 6E-08 2.1E-12 96.2 8.6 142 4-146 15-230 (384)
276 3axs_A Probable N(2),N(2)-dime 98.6 6.1E-08 2.1E-12 96.8 8.2 102 32-141 51-158 (392)
277 2ar0_A M.ecoki, type I restric 98.6 6.9E-08 2.4E-12 100.6 8.7 120 21-142 157-313 (541)
278 4auk_A Ribosomal RNA large sub 98.6 1.1E-08 3.7E-13 100.4 2.4 88 31-134 209-296 (375)
279 1m6e_X S-adenosyl-L-methionnin 98.6 4.8E-08 1.6E-12 96.1 6.0 144 3-146 14-214 (359)
280 2dul_A N(2),N(2)-dimethylguano 98.6 1.8E-07 6.1E-12 93.2 9.7 100 33-141 47-164 (378)
281 3v97_A Ribosomal RNA large sub 98.5 7.2E-07 2.5E-11 95.8 12.4 121 20-141 177-347 (703)
282 3lkd_A Type I restriction-modi 98.4 8.5E-07 2.9E-11 92.2 10.9 111 32-142 220-359 (542)
283 4gqb_A Protein arginine N-meth 98.4 8.3E-07 2.8E-11 93.3 10.4 101 33-138 357-464 (637)
284 2r6z_A UPF0341 protein in RSP 98.4 1.4E-07 4.9E-12 88.9 4.1 80 31-116 81-173 (258)
285 3o4f_A Spermidine synthase; am 98.3 9E-06 3.1E-10 77.6 14.6 105 31-140 81-197 (294)
286 3ll7_A Putative methyltransfer 98.3 6.8E-07 2.3E-11 89.5 6.7 76 33-114 93-173 (410)
287 1wg8_A Predicted S-adenosylmet 98.2 4.5E-06 1.5E-10 78.8 9.7 89 21-115 10-100 (285)
288 3ua3_A Protein arginine N-meth 98.2 3.1E-06 1.1E-10 89.0 9.0 105 34-138 410-531 (745)
289 3khk_A Type I restriction-modi 98.2 1.3E-06 4.5E-11 90.9 5.8 119 21-142 233-396 (544)
290 3cvo_A Methyltransferase-like 98.2 3E-05 1E-09 70.0 14.0 109 16-140 18-153 (202)
291 3s1s_A Restriction endonucleas 98.2 1.8E-05 6.3E-10 84.5 14.0 109 32-143 320-467 (878)
292 4fzv_A Putative methyltransfer 98.1 7.4E-06 2.5E-10 80.7 10.2 113 29-146 144-289 (359)
293 2oyr_A UPF0341 protein YHIQ; a 98.1 1.1E-06 3.9E-11 82.6 3.1 103 25-135 78-194 (258)
294 2px2_A Genome polyprotein [con 97.9 1.9E-05 6.4E-10 73.1 7.6 116 18-143 58-185 (269)
295 2qy6_A UPF0209 protein YFCK; s 97.9 1.2E-05 4.2E-10 75.6 6.4 107 32-139 59-211 (257)
296 3ufb_A Type I restriction-modi 97.9 7.9E-05 2.7E-09 77.3 12.3 123 20-142 204-363 (530)
297 3tka_A Ribosomal RNA small sub 97.8 5.6E-05 1.9E-09 73.0 9.1 93 21-116 45-140 (347)
298 2wk1_A NOVP; transferase, O-me 97.8 8E-05 2.7E-09 70.8 9.6 118 21-142 93-245 (282)
299 2vz8_A Fatty acid synthase; tr 97.7 1.2E-05 4E-10 97.2 2.3 108 32-142 1239-1349(2512)
300 3c6k_A Spermine synthase; sper 97.7 0.00018 6.2E-09 70.8 10.3 103 33-140 205-330 (381)
301 2k4m_A TR8_protein, UPF0146 pr 97.6 0.00011 3.7E-09 62.3 7.0 102 18-144 22-124 (153)
302 2zig_A TTHA0409, putative modi 97.4 0.00031 1E-08 67.3 7.9 55 20-80 223-277 (297)
303 3r24_A NSP16, 2'-O-methyl tran 97.0 0.0016 5.6E-08 61.2 7.7 97 30-143 106-219 (344)
304 1i4w_A Mitochondrial replicati 96.8 0.0023 7.7E-08 62.7 7.4 73 20-95 39-117 (353)
305 1g60_A Adenine-specific methyl 96.5 0.0046 1.6E-07 57.8 7.1 55 20-80 200-254 (260)
306 3trk_A Nonstructural polyprote 96.4 0.015 5E-07 53.6 9.6 90 200-294 210-305 (324)
307 1ej0_A FTSJ; methyltransferase 96.0 0.051 1.7E-06 46.1 10.9 75 172-246 59-133 (180)
308 2oo3_A Protein involved in cat 96.0 0.005 1.7E-07 58.1 4.6 104 34-143 92-200 (283)
309 4gua_A Non-structural polyprot 95.5 0.051 1.7E-06 55.2 9.5 89 200-293 220-314 (670)
310 2nyu_A Putative ribosomal RNA 95.4 0.018 6.1E-07 50.5 5.7 114 24-146 12-150 (196)
311 1f8f_A Benzyl alcohol dehydrog 95.0 0.021 7.1E-07 56.0 5.1 101 27-141 184-289 (371)
312 3g7u_A Cytosine-specific methy 94.9 0.12 3.9E-06 51.0 10.2 75 35-115 3-82 (376)
313 3vyw_A MNMC2; tRNA wobble urid 94.8 0.06 2.1E-06 51.3 7.5 105 32-138 95-223 (308)
314 2dph_A Formaldehyde dismutase; 94.4 0.094 3.2E-06 51.9 8.2 105 27-140 179-298 (398)
315 3dou_A Ribosomal RNA large sub 94.4 0.042 1.4E-06 48.6 5.0 44 103-146 90-144 (191)
316 1g55_A DNA cytosine methyltran 94.3 0.039 1.3E-06 53.7 5.1 78 34-115 2-79 (343)
317 2plw_A Ribosomal RNA methyltra 94.1 0.057 1.9E-06 47.5 5.4 49 103-151 105-164 (201)
318 2uyo_A Hypothetical protein ML 94.1 0.3 1E-05 46.6 10.8 104 35-144 104-221 (310)
319 1pqw_A Polyketide synthase; ro 93.9 0.03 1E-06 49.5 3.1 98 28-141 33-137 (198)
320 4ej6_A Putative zinc-binding d 93.9 0.083 2.8E-06 51.8 6.6 101 27-141 176-284 (370)
321 1kol_A Formaldehyde dehydrogen 93.9 0.22 7.4E-06 49.1 9.7 105 28-141 180-300 (398)
322 1rjd_A PPM1P, carboxy methyl t 93.9 0.59 2E-05 45.1 12.5 115 19-141 86-232 (334)
323 3s2e_A Zinc-containing alcohol 93.9 0.056 1.9E-06 52.2 5.3 100 27-141 160-263 (340)
324 3tos_A CALS11; methyltransfera 93.9 0.11 3.7E-06 48.3 6.9 112 24-142 61-218 (257)
325 1pl8_A Human sorbitol dehydrog 93.7 0.084 2.9E-06 51.3 6.2 101 27-141 165-273 (356)
326 3m6i_A L-arabinitol 4-dehydrog 93.6 0.16 5.5E-06 49.4 8.1 105 27-141 173-283 (363)
327 4eez_A Alcohol dehydrogenase 1 93.5 0.13 4.6E-06 49.5 7.3 107 26-141 156-263 (348)
328 3fpc_A NADP-dependent alcohol 93.0 0.051 1.8E-06 52.8 3.4 101 27-141 160-266 (352)
329 2c7p_A Modification methylase 92.9 0.28 9.4E-06 47.3 8.3 72 34-115 11-82 (327)
330 1e3j_A NADP(H)-dependent ketos 92.7 0.18 6E-06 48.9 6.7 100 27-141 162-271 (352)
331 1boo_A Protein (N-4 cytosine-s 92.6 0.24 8.4E-06 47.5 7.5 55 20-80 240-294 (323)
332 1v3u_A Leukotriene B4 12- hydr 92.3 0.12 4.3E-06 49.5 5.0 99 27-141 139-244 (333)
333 4a2c_A Galactitol-1-phosphate 92.2 0.26 8.9E-06 47.4 7.2 104 25-141 152-260 (346)
334 3two_A Mannitol dehydrogenase; 92.1 0.4 1.4E-05 46.3 8.4 95 27-141 170-265 (348)
335 1ej6_A Lambda2; icosahedral, n 91.9 0.51 1.8E-05 51.4 9.4 105 194-302 563-669 (1289)
336 4b7c_A Probable oxidoreductase 91.9 0.13 4.3E-06 49.5 4.5 100 27-141 143-248 (336)
337 3qv2_A 5-cytosine DNA methyltr 91.8 0.42 1.4E-05 46.0 8.0 79 33-116 9-88 (327)
338 3gms_A Putative NADPH:quinone 91.7 0.091 3.1E-06 50.7 3.3 101 25-141 136-243 (340)
339 2j3h_A NADP-dependent oxidored 91.6 0.57 2E-05 44.9 8.9 99 27-140 149-254 (345)
340 1zkd_A DUF185; NESG, RPR58, st 91.5 1 3.4E-05 44.4 10.5 84 28-118 75-163 (387)
341 2zig_A TTHA0409, putative modi 91.5 0.13 4.5E-06 48.7 4.1 58 83-141 20-97 (297)
342 1uuf_A YAHK, zinc-type alcohol 91.5 0.4 1.4E-05 46.8 7.7 99 28-141 189-288 (369)
343 2py6_A Methyltransferase FKBM; 91.4 0.31 1.1E-05 48.5 6.9 62 31-93 224-292 (409)
344 2jhf_A Alcohol dehydrogenase E 91.1 0.24 8.3E-06 48.3 5.6 101 27-141 185-293 (374)
345 3uog_A Alcohol dehydrogenase; 90.9 0.12 4.1E-06 50.4 3.2 99 27-141 183-287 (363)
346 3iyl_W VP1; non-enveloped viru 90.8 1.1 3.6E-05 49.4 10.5 101 195-299 568-670 (1299)
347 2h6e_A ADH-4, D-arabinose 1-de 90.8 0.47 1.6E-05 45.6 7.4 98 30-141 168-269 (344)
348 1eg2_A Modification methylase 90.5 0.4 1.4E-05 46.0 6.4 55 20-80 230-287 (319)
349 2hcy_A Alcohol dehydrogenase 1 90.5 0.16 5.4E-06 49.1 3.6 100 27-141 163-269 (347)
350 3jv7_A ADH-A; dehydrogenase, n 90.4 0.23 7.9E-06 47.8 4.7 97 30-141 168-270 (345)
351 4h0n_A DNMT2; SAH binding, tra 90.3 0.38 1.3E-05 46.5 6.1 78 35-116 4-81 (333)
352 1rjw_A ADH-HT, alcohol dehydro 89.9 0.71 2.4E-05 44.3 7.8 98 29-141 160-261 (339)
353 2qrv_A DNA (cytosine-5)-methyl 89.8 1.2 4.2E-05 42.1 9.1 77 33-115 15-94 (295)
354 1jvb_A NAD(H)-dependent alcoho 89.7 0.63 2.2E-05 44.8 7.2 100 28-141 165-271 (347)
355 1yb5_A Quinone oxidoreductase; 89.6 0.29 9.9E-06 47.4 4.7 99 27-141 164-269 (351)
356 3gjy_A Spermidine synthase; AP 89.5 1.3 4.6E-05 42.2 9.2 104 175-291 139-247 (317)
357 2c0c_A Zinc binding alcohol de 88.6 0.48 1.6E-05 46.0 5.5 98 28-141 158-261 (362)
358 3ps9_A TRNA 5-methylaminomethy 88.6 0.95 3.2E-05 47.9 8.2 106 33-139 66-217 (676)
359 3ubt_Y Modification methylase 88.4 2.7 9.2E-05 39.9 10.6 72 35-115 1-72 (331)
360 1cdo_A Alcohol dehydrogenase; 88.4 0.6 2.1E-05 45.4 6.1 101 27-141 186-294 (374)
361 2zb4_A Prostaglandin reductase 88.4 1.4 4.8E-05 42.5 8.6 100 27-141 152-260 (357)
362 3qwb_A Probable quinone oxidor 88.3 0.24 8.3E-06 47.5 3.1 97 29-141 144-247 (334)
363 3jyn_A Quinone oxidoreductase; 88.2 0.22 7.4E-06 47.7 2.6 99 27-141 134-239 (325)
364 4eye_A Probable oxidoreductase 87.9 0.32 1.1E-05 46.9 3.7 98 27-141 153-257 (342)
365 2eih_A Alcohol dehydrogenase; 87.8 0.42 1.4E-05 46.0 4.5 97 29-141 162-265 (343)
366 2b5w_A Glucose dehydrogenase; 87.8 1 3.5E-05 43.5 7.3 97 30-141 163-273 (357)
367 3uko_A Alcohol dehydrogenase c 87.7 0.41 1.4E-05 46.8 4.4 102 26-141 186-295 (378)
368 1e3i_A Alcohol dehydrogenase, 87.7 0.61 2.1E-05 45.4 5.6 101 27-141 189-297 (376)
369 1p0f_A NADP-dependent alcohol 87.6 0.53 1.8E-05 45.8 5.1 101 27-141 185-293 (373)
370 2fzw_A Alcohol dehydrogenase c 87.0 0.7 2.4E-05 44.9 5.5 101 27-141 184-292 (373)
371 3fwz_A Inner membrane protein 87.0 1.5 5.1E-05 36.1 6.9 98 34-141 7-105 (140)
372 1wly_A CAAR, 2-haloacrylate re 86.9 0.46 1.6E-05 45.5 4.1 98 28-141 140-244 (333)
373 3fbg_A Putative arginate lyase 86.7 0.77 2.6E-05 44.2 5.6 93 33-140 150-247 (346)
374 4dup_A Quinone oxidoreductase; 86.6 0.49 1.7E-05 45.7 4.2 99 27-141 161-265 (353)
375 1qor_A Quinone oxidoreductase; 86.6 0.26 9.1E-06 47.0 2.2 98 28-141 135-239 (327)
376 2d8a_A PH0655, probable L-thre 86.5 0.34 1.2E-05 46.7 3.0 100 27-141 162-267 (348)
377 3goh_A Alcohol dehydrogenase, 86.3 0.65 2.2E-05 44.0 4.8 92 27-140 136-228 (315)
378 3llv_A Exopolyphosphatase-rela 86.1 4.7 0.00016 32.8 9.5 73 34-113 6-79 (141)
379 2j8z_A Quinone oxidoreductase; 85.9 0.37 1.3E-05 46.7 2.9 99 27-141 156-261 (354)
380 4auk_A Ribosomal RNA large sub 85.9 0.38 1.3E-05 47.0 2.9 70 128-218 206-287 (375)
381 1boo_A Protein (N-4 cytosine-s 85.8 0.67 2.3E-05 44.4 4.6 58 83-141 13-84 (323)
382 4dvj_A Putative zinc-dependent 85.4 2.2 7.6E-05 41.3 8.2 94 33-140 171-269 (363)
383 1vj0_A Alcohol dehydrogenase, 85.2 0.54 1.8E-05 46.0 3.7 101 27-141 188-298 (380)
384 3id6_C Fibrillarin-like rRNA/T 85.0 2.1 7.1E-05 38.9 7.3 59 175-251 125-183 (232)
385 1dus_A MJ0882; hypothetical pr 84.6 1.7 5.8E-05 37.0 6.3 78 177-273 104-181 (194)
386 1piw_A Hypothetical zinc-type 84.4 0.66 2.2E-05 45.0 3.8 99 29-140 175-275 (360)
387 4dzr_A Protein-(glutamine-N5) 84.3 8.7 0.0003 33.1 11.0 60 229-292 144-206 (215)
388 3ic5_A Putative saccharopine d 84.2 3.4 0.00012 32.0 7.5 76 33-114 4-79 (118)
389 1yqd_A Sinapyl alcohol dehydro 84.0 1.7 5.9E-05 42.1 6.7 99 28-141 181-282 (366)
390 3nx4_A Putative oxidoreductase 83.9 2.2 7.4E-05 40.4 7.3 98 28-141 140-241 (324)
391 3gaz_A Alcohol dehydrogenase s 83.9 0.72 2.5E-05 44.3 3.9 96 27-141 144-246 (343)
392 3pvc_A TRNA 5-methylaminomethy 83.8 2.4 8.2E-05 44.9 8.3 105 33-138 58-208 (689)
393 2dq4_A L-threonine 3-dehydroge 83.3 0.33 1.1E-05 46.7 1.2 97 28-141 160-262 (343)
394 3ip1_A Alcohol dehydrogenase, 82.9 1.4 4.8E-05 43.4 5.6 99 30-141 210-318 (404)
395 3c85_A Putative glutathione-re 82.9 5.2 0.00018 34.2 8.8 99 34-141 39-139 (183)
396 2cdc_A Glucose dehydrogenase g 82.8 1.8 6.1E-05 41.9 6.3 90 34-141 181-278 (366)
397 2frn_A Hypothetical protein PH 82.8 8.9 0.0003 35.4 10.9 71 177-271 177-253 (278)
398 3e23_A Uncharacterized protein 82.7 4.2 0.00014 35.4 8.2 89 198-295 99-204 (211)
399 2cf5_A Atccad5, CAD, cinnamyl 81.7 1.8 6.3E-05 41.7 5.8 99 28-141 174-275 (357)
400 1lss_A TRK system potassium up 81.2 9.2 0.00032 30.5 9.3 96 34-139 4-100 (140)
401 1xa0_A Putative NADPH dependen 80.8 0.75 2.6E-05 43.8 2.7 98 28-141 143-246 (328)
402 1iz0_A Quinone oxidoreductase; 80.8 1.2 4.2E-05 41.7 4.1 92 31-140 123-217 (302)
403 2xyq_A Putative 2'-O-methyl tr 79.7 1.3 4.5E-05 41.7 3.9 27 119-145 149-175 (290)
404 3me5_A Cytosine-specific methy 79.4 3.3 0.00011 41.9 7.0 58 34-95 88-146 (482)
405 2p41_A Type II methyltransfera 79.3 2.4 8E-05 40.2 5.6 110 24-144 73-194 (305)
406 2eez_A Alanine dehydrogenase; 78.9 1.6 5.6E-05 42.5 4.4 100 33-140 165-265 (369)
407 2cmg_A Spermidine synthase; tr 78.6 7.2 0.00025 35.9 8.6 74 200-291 138-216 (262)
408 3eey_A Putative rRNA methylase 76.8 28 0.00095 29.5 11.5 71 175-254 74-144 (197)
409 2bm8_A Cephalosporin hydroxyla 76.6 1.7 5.9E-05 39.3 3.6 84 175-276 130-221 (236)
410 1tt7_A YHFP; alcohol dehydroge 76.6 2.1 7.2E-05 40.6 4.4 99 29-141 145-247 (330)
411 1zcj_A Peroxisomal bifunctiona 76.6 55 0.0019 32.6 15.1 154 35-207 38-213 (463)
412 3h2s_A Putative NADH-flavin re 76.6 9 0.00031 33.4 8.4 97 36-140 2-103 (224)
413 2dpo_A L-gulonate 3-dehydrogen 76.2 21 0.00073 33.7 11.4 194 35-263 7-225 (319)
414 1wma_A Carbonyl reductase [NAD 75.6 6.9 0.00024 35.3 7.5 80 33-114 3-92 (276)
415 2g1u_A Hypothetical protein TM 75.5 6.6 0.00023 32.6 6.8 101 32-141 17-118 (155)
416 3ius_A Uncharacterized conserv 74.6 21 0.0007 32.4 10.6 70 35-116 6-75 (286)
417 3grz_A L11 mtase, ribosomal pr 74.6 9.1 0.00031 33.0 7.8 73 176-272 110-183 (205)
418 3krt_A Crotonyl COA reductase; 74.5 2.1 7.3E-05 42.8 3.9 97 29-141 224-344 (456)
419 4a0s_A Octenoyl-COA reductase/ 74.1 3.1 0.0001 41.4 5.0 101 29-141 216-336 (447)
420 3o26_A Salutaridine reductase; 73.8 12 0.00043 34.3 9.0 81 33-115 11-102 (311)
421 3ggo_A Prephenate dehydrogenas 73.5 46 0.0016 31.2 13.0 91 34-139 33-126 (314)
422 2qfm_A Spermine synthase; sper 72.4 13 0.00045 36.0 8.8 84 199-283 265-351 (364)
423 3pxx_A Carveol dehydrogenase; 72.1 14 0.00047 33.8 8.8 106 33-140 9-152 (287)
424 3iht_A S-adenosyl-L-methionine 71.6 8.5 0.00029 32.6 6.2 113 18-139 26-145 (174)
425 4e12_A Diketoreductase; oxidor 71.3 35 0.0012 31.3 11.4 184 35-243 5-212 (283)
426 2gn4_A FLAA1 protein, UDP-GLCN 71.0 9.2 0.00032 36.4 7.5 83 33-116 20-103 (344)
427 3l9w_A Glutathione-regulated p 71.0 7.7 0.00026 38.3 7.0 99 34-142 4-103 (413)
428 4f3n_A Uncharacterized ACR, CO 70.9 4.8 0.00016 40.0 5.4 75 34-118 138-221 (432)
429 1g60_A Adenine-specific methyl 70.8 2.4 8.2E-05 39.0 3.1 55 86-141 6-74 (260)
430 3pi7_A NADH oxidoreductase; gr 70.6 1 3.5E-05 43.3 0.5 69 61-141 190-263 (349)
431 3gqv_A Enoyl reductase; medium 69.4 4.8 0.00016 38.9 5.1 93 32-140 163-262 (371)
432 2vhw_A Alanine dehydrogenase; 68.9 3.3 0.00011 40.5 3.7 101 33-140 167-267 (377)
433 3tqh_A Quinone oxidoreductase; 68.7 22 0.00076 33.2 9.6 96 27-140 146-244 (321)
434 2b3t_A Protein methyltransfera 68.0 35 0.0012 31.0 10.6 102 175-290 159-275 (276)
435 1eg2_A Modification methylase 67.8 4 0.00014 38.9 4.0 57 84-141 38-106 (319)
436 3r6d_A NAD-dependent epimerase 67.7 16 0.00056 31.7 8.0 96 36-140 7-106 (221)
437 3oig_A Enoyl-[acyl-carrier-pro 67.7 19 0.00066 32.4 8.7 107 33-141 6-147 (266)
438 3mb5_A SAM-dependent methyltra 67.6 13 0.00043 33.4 7.3 72 177-273 147-221 (255)
439 3grk_A Enoyl-(acyl-carrier-pro 66.9 15 0.0005 34.1 7.7 108 33-141 30-169 (293)
440 3mog_A Probable 3-hydroxybutyr 66.7 68 0.0023 32.2 13.1 181 35-243 6-210 (483)
441 4dcm_A Ribosomal RNA large sub 66.7 44 0.0015 32.2 11.4 97 33-144 38-139 (375)
442 4a27_A Synaptic vesicle membra 66.6 4.2 0.00014 38.9 4.0 97 27-141 136-238 (349)
443 3mti_A RRNA methylase; SAM-dep 66.6 11 0.00036 31.9 6.2 54 199-254 87-140 (185)
444 1l3i_A Precorrin-6Y methyltran 65.9 4.4 0.00015 34.2 3.6 66 200-280 99-165 (192)
445 2yxl_A PH0851 protein, 450AA l 65.8 14 0.00048 36.8 7.8 85 175-265 310-408 (450)
446 1id1_A Putative potassium chan 65.7 22 0.00076 29.1 7.9 100 34-140 3-104 (153)
447 3r3h_A O-methyltransferase, SA 65.6 9.6 0.00033 34.4 6.0 57 176-248 113-169 (242)
448 3l4b_C TRKA K+ channel protien 65.6 12 0.00041 32.9 6.6 95 36-139 2-97 (218)
449 4g65_A TRK system potassium up 65.2 7.6 0.00026 39.0 5.6 72 34-111 3-75 (461)
450 4eso_A Putative oxidoreductase 65.0 12 0.0004 33.9 6.5 106 33-141 7-138 (255)
451 3e8x_A Putative NAD-dependent 64.9 18 0.00061 31.9 7.7 76 33-116 20-96 (236)
452 3cgg_A SAM-dependent methyltra 64.4 37 0.0013 28.3 9.4 88 175-278 89-179 (195)
453 3abi_A Putative uncharacterize 64.2 15 0.00053 35.2 7.5 72 33-113 15-86 (365)
454 2vn8_A Reticulon-4-interacting 64.1 13 0.00043 35.9 6.9 96 31-141 181-280 (375)
455 2oxt_A Nucleoside-2'-O-methylt 63.8 4.7 0.00016 37.3 3.5 109 22-143 63-187 (265)
456 2h7i_A Enoyl-[acyl-carrier-pro 63.2 15 0.00053 33.3 7.0 80 33-114 6-97 (269)
457 2wa2_A Non-structural protein 62.6 5 0.00017 37.3 3.5 109 22-143 71-195 (276)
458 3ek2_A Enoyl-(acyl-carrier-pro 62.3 7.7 0.00026 35.1 4.7 82 32-114 12-102 (271)
459 1pjc_A Protein (L-alanine dehy 62.3 3.6 0.00012 39.8 2.6 100 34-140 167-266 (361)
460 3ce6_A Adenosylhomocysteinase; 61.8 16 0.00053 37.0 7.2 90 32-141 272-361 (494)
461 2aef_A Calcium-gated potassium 61.3 35 0.0012 30.1 8.9 97 33-141 8-105 (234)
462 2hwk_A Helicase NSP2; rossman 61.2 7.7 0.00026 36.2 4.3 43 103-145 205-258 (320)
463 3ado_A Lambda-crystallin; L-gu 61.1 1.1E+02 0.0037 28.8 12.7 187 33-243 5-214 (319)
464 3evz_A Methyltransferase; NYSG 60.8 17 0.00057 31.9 6.6 92 176-274 105-205 (230)
465 3sso_A Methyltransferase; macr 60.4 12 0.00039 37.1 5.8 84 174-271 263-359 (419)
466 2hmt_A YUAA protein; RCK, KTN, 60.0 21 0.00073 28.3 6.7 97 34-140 6-103 (144)
467 4hg2_A Methyltransferase type 59.8 28 0.00094 31.7 8.0 61 174-254 80-140 (257)
468 3ioy_A Short-chain dehydrogena 59.7 26 0.0009 32.8 8.2 80 33-114 7-97 (319)
469 3d4o_A Dipicolinate synthase s 59.6 58 0.002 30.0 10.4 105 18-140 138-243 (293)
470 2yx1_A Hypothetical protein MJ 59.5 13 0.00044 35.4 5.9 89 176-292 244-332 (336)
471 4dmg_A Putative uncharacterize 59.4 21 0.00071 34.9 7.5 73 191-266 271-344 (393)
472 2pxx_A Uncharacterized protein 58.9 30 0.001 29.5 7.9 127 116-254 25-164 (215)
473 3c6k_A Spermine synthase; sper 58.8 12 0.00041 36.5 5.5 75 199-275 282-360 (381)
474 1ja9_A 4HNR, 1,3,6,8-tetrahydr 58.5 18 0.00063 32.5 6.6 80 33-114 20-109 (274)
475 1ixk_A Methyltransferase; open 58.4 34 0.0011 32.1 8.6 68 175-250 169-247 (315)
476 3h2b_A SAM-dependent methyltra 58.2 70 0.0024 27.0 10.2 99 174-293 83-197 (203)
477 3k31_A Enoyl-(acyl-carrier-pro 58.1 17 0.0006 33.6 6.5 108 33-141 29-168 (296)
478 3e05_A Precorrin-6Y C5,15-meth 57.9 12 0.00042 32.2 5.1 76 175-273 90-166 (204)
479 3dqp_A Oxidoreductase YLBE; al 57.5 8.7 0.0003 33.6 4.1 72 36-115 2-74 (219)
480 3k6j_A Protein F01G10.3, confi 57.5 1.1E+02 0.0038 30.4 12.6 181 35-243 55-256 (460)
481 1lnq_A MTHK channels, potassiu 57.3 57 0.0019 30.6 10.1 95 34-140 115-210 (336)
482 1mjf_A Spermidine synthase; sp 57.3 14 0.00049 34.0 5.7 84 199-291 150-239 (281)
483 3ruf_A WBGU; rossmann fold, UD 57.1 26 0.00088 32.9 7.6 80 33-114 24-110 (351)
484 3zwc_A Peroxisomal bifunctiona 56.7 2E+02 0.0069 30.4 16.3 183 35-243 317-519 (742)
485 1f0y_A HCDH, L-3-hydroxyacyl-C 56.6 42 0.0014 31.0 9.0 183 34-243 15-226 (302)
486 4gek_A TRNA (CMO5U34)-methyltr 56.5 55 0.0019 29.7 9.5 60 176-254 124-183 (261)
487 3dr5_A Putative O-methyltransf 55.8 32 0.0011 30.3 7.6 41 193-247 121-161 (221)
488 3edm_A Short chain dehydrogena 55.5 23 0.00077 32.0 6.7 79 33-113 7-95 (259)
489 3ew7_A LMO0794 protein; Q8Y8U8 55.1 44 0.0015 28.6 8.4 96 36-140 2-101 (221)
490 4e6p_A Probable sorbitol dehyd 55.0 25 0.00087 31.6 6.9 79 33-114 7-92 (259)
491 1ej6_A Lambda2; icosahedral, n 54.8 27 0.00091 38.5 7.7 102 32-144 820-929 (1289)
492 3ijr_A Oxidoreductase, short c 54.7 32 0.0011 31.6 7.7 106 33-140 46-181 (291)
493 2gdz_A NAD+-dependent 15-hydro 54.6 22 0.00074 32.1 6.4 81 33-115 6-97 (267)
494 3tfw_A Putative O-methyltransf 54.4 45 0.0015 29.7 8.5 36 199-248 134-169 (248)
495 2pd4_A Enoyl-[acyl-carrier-pro 54.2 36 0.0012 30.8 7.9 79 33-114 5-94 (275)
496 2km1_A Protein DRE2; yeast, an 54.0 4.8 0.00016 33.3 1.5 71 69-139 21-96 (136)
497 1qsg_A Enoyl-[acyl-carrier-pro 53.3 29 0.00098 31.3 7.0 79 33-114 8-97 (265)
498 1o54_A SAM-dependent O-methylt 53.2 34 0.0012 31.0 7.6 73 176-273 165-238 (277)
499 4da9_A Short-chain dehydrogena 53.0 40 0.0014 30.7 8.1 80 33-114 28-117 (280)
500 3dmg_A Probable ribosomal RNA 52.9 1.1E+02 0.0038 29.4 11.5 106 33-153 45-151 (381)
No 1
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.94 E-value=2.2e-26 Score=209.26 Aligned_cols=169 Identities=23% Similarity=0.354 Sum_probs=131.2
Q ss_pred HHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc
Q psy11646 21 LLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES 99 (433)
Q Consensus 21 ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~ 99 (433)
.|.++.+.+. .+++.+|||+|||+|.++ ..+++. ..+|+|+|+++.. ...+++++++|+.+....
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s-~~la~~----~~~V~gvD~~~~~--------~~~~v~~~~~D~~~~~~~- 77 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWT-QVLNSL----ARKIISIDLQEME--------EIAGVRFIRCDIFKETIF- 77 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHH-HHHTTT----CSEEEEEESSCCC--------CCTTCEEEECCTTSSSHH-
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHH-HHHHHc----CCcEEEEeccccc--------cCCCeEEEEccccCHHHH-
Confidence 3445666655 367899999999999999 555543 2599999999741 124677777777653211
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeeccccCceE
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLLFTGVIQ 179 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~pl~gv~~ 179 (433)
T Consensus 78 -------------------------------------------------------------------------------- 77 (191)
T 3dou_A 78 -------------------------------------------------------------------------------- 77 (191)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEccccccchHHHHHHhcC---CCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCHH
Q psy11646 180 VQGDITKESTIKEIFSHFD---DEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNVV 256 (433)
Q Consensus 180 iqgDi~~~~t~~~il~~~~---~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~~ 256 (433)
..+...++ ...+|+|+||++|+++|.+..|+..+..+...++..+.++|+|||.|++|+|+|.+..
T Consensus 78 -----------~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~ 146 (191)
T 3dou_A 78 -----------DDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTN 146 (191)
T ss_dssp -----------HHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHH
T ss_pred -----------HHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHH
Confidence 11111111 1168999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccceeEEecCCCCcccccceeEEEeeccCC
Q psy11646 257 CLETKFQIFFENVSIAKPKSSRNSSIESFIVCQNYRPP 294 (433)
Q Consensus 257 ~~~~~l~~~F~~v~~~KP~~sr~~s~E~~~v~~~~~~~ 294 (433)
.+...++..|..|.+.||.|||++|+|+|+||++|+..
T Consensus 147 ~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v~~~~~~~ 184 (191)
T 3dou_A 147 DFIAIWRKNFSSYKISKPPASRGSSSEIYIMFFGFKAE 184 (191)
T ss_dssp HHHHHHGGGEEEEEEECC------CCEEEEEEEEECCC
T ss_pred HHHHHHHHhcCEEEEECCCCccCCCceEEEEEeeeccc
Confidence 99999999999999999999999999999999999854
No 2
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=99.92 E-value=1.3e-26 Score=217.82 Aligned_cols=105 Identities=18% Similarity=0.127 Sum_probs=98.9
Q ss_pred CCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCC--CeEEEEEee--cCCHHHHHHHHhcccceeEEecC
Q psy11646 199 DEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPG--GTFVGKIFR--SRNVVCLETKFQIFFENVSIAKP 274 (433)
Q Consensus 199 ~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~g--G~fv~Kif~--g~~~~~~~~~l~~~F~~v~~~KP 274 (433)
..++|+|+|||||+ +|.+..|++++++| +++|..+|++| |+||+|+|+ |.+...++.+++.+|+.|.+.||
T Consensus 154 ~~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~V~~~KP 228 (282)
T 3gcz_A 154 VIPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGGGLVRVP 228 (282)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCT
T ss_pred CCCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCCEEEEcC
Confidence 45799999999999 99999999999998 99999999999 999999999 99999999999999999999999
Q ss_pred CCCcccccceeEEEeeccCCCCCCCCccCcccccc
Q psy11646 275 KSSRNSSIESFIVCQNYRPPKDYVPTIMNPFTEIT 309 (433)
Q Consensus 275 ~~sr~~s~E~~~v~~~~~~~~~~~~~~~~~~~~~~ 309 (433)
|||++|+|+|+||++...+.+++|.++.+++...
T Consensus 229 -aSR~~S~E~Y~V~~~r~n~~~~v~~~s~~l~~r~ 262 (282)
T 3gcz_A 229 -LSRNSTHEMYWVSGTRTDVVGTVSNVSRLLTRRM 262 (282)
T ss_dssp -TSCTTCCCEEEETTCCCCSHHHHHHHHHHHHHHH
T ss_pred -CCcccCcceeEEEecCCCccchHHHHHHHHHHHH
Confidence 9999999999999999999999998888777543
No 3
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.91 E-value=9.7e-26 Score=211.65 Aligned_cols=105 Identities=19% Similarity=0.118 Sum_probs=98.7
Q ss_pred CCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCC-CeEEEEEee--cCCHHHHHHHHhcccceeEEecCC
Q psy11646 199 DEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPG-GTFVGKIFR--SRNVVCLETKFQIFFENVSIAKPK 275 (433)
Q Consensus 199 ~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~g-G~fv~Kif~--g~~~~~~~~~l~~~F~~v~~~KP~ 275 (433)
..++|+|+||++|+ +|.+..|++.+++| +++|..+|++| |+||+|+|+ |.+...++.+++.+|+.|.+.||
T Consensus 138 ~~~~DlVlsD~apn-sG~~~~D~~rs~~L----L~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KP- 211 (277)
T 3evf_A 138 PVKCDTLLCDIGES-SSSSVTEGERTVRV----LDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNP- 211 (277)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCT-
T ss_pred CCCccEEEecCccC-cCchHHHHHHHHHH----HHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeC-
Confidence 45799999999999 99999999999988 99999999999 999999999 99999999999999999999999
Q ss_pred CCcccccceeEEEeeccCCCCCCCCccCcccccc
Q psy11646 276 SSRNSSIESFIVCQNYRPPKDYVPTIMNPFTEIT 309 (433)
Q Consensus 276 ~sr~~s~E~~~v~~~~~~~~~~~~~~~~~~~~~~ 309 (433)
|||++|+|+|+||++...+.+++|.++.+++...
T Consensus 212 aSR~~S~E~Y~V~~~r~n~~~~v~~~s~~l~~r~ 245 (277)
T 3evf_A 212 LSRNSTHEMYYVSGARSNVTFTVNQTSRLLMRRM 245 (277)
T ss_dssp TSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceEEEEecCCCccchHHHHHHHHHHHH
Confidence 9999999999999999999999998888777543
No 4
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=99.90 E-value=6.2e-25 Score=207.50 Aligned_cols=105 Identities=16% Similarity=0.121 Sum_probs=99.3
Q ss_pred CCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCC-CeEEEEEee--cCCHHHHHHHHhcccceeEEecCC
Q psy11646 199 DEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPG-GTFVGKIFR--SRNVVCLETKFQIFFENVSIAKPK 275 (433)
Q Consensus 199 ~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~g-G~fv~Kif~--g~~~~~~~~~l~~~F~~v~~~KP~ 275 (433)
..++|+|+||+||+ +|.+..|++++++| +++|..+|++| |+||+|+|+ |.+...++.+++.+|+.|.+.||
T Consensus 145 ~~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~~KP- 218 (300)
T 3eld_A 145 TEPSDTLLCDIGES-SSNPLVERDRTMKV----LENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVP- 218 (300)
T ss_dssp CCCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEECCT-
T ss_pred CCCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEEEeC-
Confidence 34799999999999 99999999999999 99999999999 999999999 99999999999999999999999
Q ss_pred CCcccccceeEEEeeccCCCCCCCCccCcccccc
Q psy11646 276 SSRNSSIESFIVCQNYRPPKDYVPTIMNPFTEIT 309 (433)
Q Consensus 276 ~sr~~s~E~~~v~~~~~~~~~~~~~~~~~~~~~~ 309 (433)
|||++|.|+|+||.+...+.+++|.++.+++...
T Consensus 219 aSR~~S~E~Y~V~~~r~n~~~~v~~~~~~l~~r~ 252 (300)
T 3eld_A 219 FSRNSTHEMYYISGARNNITHMVNTTSRSLLRRM 252 (300)
T ss_dssp TSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCChHHeeeccCCCCcchhHHHHHHHHHHHH
Confidence 9999999999999999999999998888777544
No 5
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=99.86 E-value=2.9e-22 Score=185.05 Aligned_cols=133 Identities=22% Similarity=0.207 Sum_probs=112.5
Q ss_pred hccCCCEEEEEeccCCchhhHHHhhhcCCCccccccce--e--------------eeeccc-cCceEEE---c-cccccc
Q psy11646 130 LLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVR--T--------------YRCLLF-TGVIQVQ---G-DITKES 188 (433)
Q Consensus 130 ~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r--~--------------~~m~pl-~gv~~iq---g-Di~~~~ 188 (433)
+++||+.++ +++..| +.|++|+..+ . .+|.++ +|+.+++ + |+++
T Consensus 70 likpg~~VV--DLGaAP-----------GGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~-- 134 (269)
T 2px2_A 70 FVQPIGKVV--DLGCGR-----------GGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFY-- 134 (269)
T ss_dssp SCCCCEEEE--EETCTT-----------SHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGG--
T ss_pred CCCCCCEEE--EcCCCC-----------CHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccC--
Confidence 999998765 567887 8999988766 3 233444 6775554 6 9886
Q ss_pred hHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC-eEEEEEeec--CCHHHHHHHHhcc
Q psy11646 189 TIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG-TFVGKIFRS--RNVVCLETKFQIF 265 (433)
Q Consensus 189 t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG-~fv~Kif~g--~~~~~~~~~l~~~ 265 (433)
++..++|+|+|||||+ +|....|+.+++. |+++|..+|++|| +||+|+|+| .++..+++.++..
T Consensus 135 --------~~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~ 201 (269)
T 2px2_A 135 --------KPSEISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRR 201 (269)
T ss_dssp --------SCCCCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHH
T ss_pred --------CCCCCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHH
Confidence 4467899999999999 9999999999988 9999999999999 999999998 5677888999999
Q ss_pred cceeEEecCCCCcccccceeEEEeec
Q psy11646 266 FENVSIAKPKSSRNSSIESFIVCQNY 291 (433)
Q Consensus 266 F~~v~~~KP~~sr~~s~E~~~v~~~~ 291 (433)
|..|.+ ||.|||++|+|+|+||...
T Consensus 202 F~~vkv-k~paSR~~S~E~YlVa~~~ 226 (269)
T 2px2_A 202 FGGGLV-RVPLSRNSNHEMYWVSGAS 226 (269)
T ss_dssp HCCEEE-CCTTSCTTCCCEEEETTCC
T ss_pred cCCEEE-ECCCCCCCCccEEEEeccc
Confidence 999997 5559999999999999765
No 6
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.83 E-value=5e-21 Score=178.70 Aligned_cols=119 Identities=18% Similarity=0.069 Sum_probs=101.4
Q ss_pred ccceeeeeccccCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC
Q psy11646 164 TQVRTYRCLLFTGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG 243 (433)
Q Consensus 164 ~~~r~~~m~pl~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG 243 (433)
....+.++.+... .+++||+....+ +.++|+|+|||||++||..+.|..+++.|++.|+++|.++|++||
T Consensus 142 VavDL~~~~sda~-~~IqGD~~~~~~---------~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGG 211 (344)
T 3r24_A 142 VDSDLNDFVSDAD-STLIGDCATVHT---------ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGG 211 (344)
T ss_dssp EEEESSCCBCSSS-EEEESCGGGEEE---------SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEE
T ss_pred EEeeCcccccCCC-eEEEcccccccc---------CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCC
Confidence 3344444554445 459999755333 578999999999999999998988899999999999999999999
Q ss_pred eEEEEEeecCCHHHHHHHHhcccceeEEecCCCCcccccceeEEEeeccCC
Q psy11646 244 TFVGKIFRSRNVVCLETKFQIFFENVSIAKPKSSRNSSIESFIVCQNYRPP 294 (433)
Q Consensus 244 ~fv~Kif~g~~~~~~~~~l~~~F~~v~~~KP~~sr~~s~E~~~v~~~~~~~ 294 (433)
+|++|+|+|.+. .++.++++.|+.|+++| .|||.+|+|+|+||++|+++
T Consensus 212 sFvVKVFQGsg~-~~L~~lrk~F~~VK~fK-~ASRa~SsEvYLVG~gfKg~ 260 (344)
T 3r24_A 212 SIAVKITEHSWN-ADLYKLMGHFSWWTAFV-TNVNASSSEAFLIGANYLGK 260 (344)
T ss_dssp EEEEEECSSSCC-HHHHHHHTTEEEEEEEE-EGGGTTSSCEEEEEEEECSS
T ss_pred EEEEEEecCCCH-HHHHHHHhhCCeEEEEC-CCCCCCCeeEEEEeeeccCC
Confidence 999999999995 55666777999999998 69999999999999999986
No 7
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.82 E-value=1.4e-19 Score=163.71 Aligned_cols=101 Identities=33% Similarity=0.513 Sum_probs=82.7
Q ss_pred CCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCHHHHHHHHhcccceeEEecCCCCcc
Q psy11646 200 EKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNVVCLETKFQIFFENVSIAKPKSSRN 279 (433)
Q Consensus 200 ~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~~~~~~~l~~~F~~v~~~KP~~sr~ 279 (433)
..+|+|+++++++.+|.+..|+..+..+...++..+.++|+|||.|++++|.+.+...+...++..|..+.+.||.++|.
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~v~~~~~~~~~~ 175 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRK 175 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEEEEEECCC----
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcceEEECCcccCc
Confidence 46899999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred cccceeEEEeeccCCCCCCCC
Q psy11646 280 SSIESFIVCQNYRPPKDYVPT 300 (433)
Q Consensus 280 ~s~E~~~v~~~~~~~~~~~~~ 300 (433)
.|.|.|++|.+|+.+++|.|+
T Consensus 176 ~~~e~~~v~~g~~~~~~~~~~ 196 (196)
T 2nyu_A 176 ESSEVYFLATQYHGRKGTVKQ 196 (196)
T ss_dssp ----EEEEEEEECCC------
T ss_pred cCceEEEEeeecCCcccccCC
Confidence 999999999999999988874
No 8
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=2.9e-19 Score=168.68 Aligned_cols=128 Identities=23% Similarity=0.390 Sum_probs=105.3
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC
Q psy11646 3 KATLYETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN 82 (433)
Q Consensus 3 ~a~~Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~ 82 (433)
++..|++....+..... .++..+...++.+|||||||+|.++. .++...+. .+++|+|+|+.|++.|+++.
T Consensus 7 ~~~~y~~~~~~~~~~~~----~l~~~~~~~~~~~vLdiG~G~G~~~~-~l~~~~~~--~~v~~~D~s~~~~~~a~~~~-- 77 (259)
T 2p35_A 7 SAQQYLKFEDERTRPAR----DLLAQVPLERVLNGYDLGCGPGNSTE-LLTDRYGV--NVITGIDSDDDMLEKAADRL-- 77 (259)
T ss_dssp -CGGGBCCCCGGGHHHH----HHHTTCCCSCCSSEEEETCTTTHHHH-HHHHHHCT--TSEEEEESCHHHHHHHHHHS--
T ss_pred CHHHHHHHHHHHHHHHH----HHHHhcCCCCCCEEEEecCcCCHHHH-HHHHhCCC--CEEEEEECCHHHHHHHHHhC--
Confidence 46778877777765554 45556666788999999999999994 44444443 48999999999999999984
Q ss_pred CCeEEEEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 83 PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 83 ~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.++++.++|+...+ + +++||+|+++.++||++++..+++++.++|+|||.+++..+.
T Consensus 78 ~~~~~~~~d~~~~~-~---~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 78 PNTNFGKADLATWK-P---AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp TTSEEEECCTTTCC-C---SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred CCcEEEECChhhcC-c---cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 68999999998765 3 378999999999999999999999999999999999998753
No 9
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.82 E-value=3.1e-19 Score=162.27 Aligned_cols=188 Identities=23% Similarity=0.350 Sum_probs=135.8
Q ss_pred HHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccccccc
Q psy11646 24 QYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFL 102 (433)
Q Consensus 24 ~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~ 102 (433)
++.+.+. .+++.+|||+|||+|.++ ..+++..+....+++|+|+|+.+ ...++++.++|+.+.+.
T Consensus 12 ~~~~~~~~~~~~~~vLDlGcG~G~~~-~~l~~~~~~~~~~v~gvD~s~~~--------~~~~v~~~~~d~~~~~~----- 77 (201)
T 2plw_A 12 ELDNKYLFLKKNKIILDIGCYPGSWC-QVILERTKNYKNKIIGIDKKIMD--------PIPNVYFIQGEIGKDNM----- 77 (201)
T ss_dssp HHHHHHCCCCTTEEEEEESCTTCHHH-HHHHHHTTTSCEEEEEEESSCCC--------CCTTCEEEECCTTTTSS-----
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCHHH-HHHHHHcCCCCceEEEEeCCccC--------CCCCceEEEccccchhh-----
Confidence 4555554 367889999999999999 55555554201499999999831 12578888888765320
Q ss_pred CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeeccccCceEEEc
Q psy11646 103 AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLLFTGVIQVQG 182 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~pl~gv~~iqg 182 (433)
. ++++ |+ + +. . ..+
T Consensus 78 ~----~~~~---------------------~~-~--i~-----~-----------~~~---------------------- 91 (201)
T 2plw_A 78 N----NIKN---------------------IN-Y--ID-----N-----------MNN---------------------- 91 (201)
T ss_dssp C----CC-------------------------------------------------------------------------
T ss_pred h----hhcc---------------------cc-c--cc-----c-----------ccc----------------------
Confidence 0 0000 00 0 00 0 000
Q ss_pred cccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCHHHHHHHH
Q psy11646 183 DITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNVVCLETKF 262 (433)
Q Consensus 183 Di~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~~~~~~~l 262 (433)
......+...+....+|+|++++++..+|.+..|+..+..+...++..+.++|+|||.|++++|.+.+...+...+
T Consensus 92 ----~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l 167 (201)
T 2plw_A 92 ----NSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYL 167 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHH
T ss_pred ----hhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHH
Confidence 0122333444556689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeEEecCCCCcccccceeEEEeeccCCC
Q psy11646 263 QIFFENVSIAKPKSSRNSSIESFIVCQNYRPPK 295 (433)
Q Consensus 263 ~~~F~~v~~~KP~~sr~~s~E~~~v~~~~~~~~ 295 (433)
+..|..+.+.||.++|..|.|.|+||.+|+++.
T Consensus 168 ~~~f~~v~~~~~~~~r~~s~e~y~v~~~~~~~~ 200 (201)
T 2plw_A 168 KGMFQLVHTTKPKASRNESREIYLVCKNFLGRK 200 (201)
T ss_dssp HTTEEEEEECCCC-----CCEEEEEEEEECCC-
T ss_pred HHHHheEEEECCcccCCcCceEEEEEecCccCC
Confidence 999999999999999999999999999999864
No 10
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.79 E-value=4.1e-18 Score=161.05 Aligned_cols=129 Identities=18% Similarity=0.288 Sum_probs=105.0
Q ss_pred hhhhhhhhhhcHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--
Q psy11646 4 ATLYETNNSMQQLDAAKLLSQYID-QFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-- 80 (433)
Q Consensus 4 a~~Y~~~~~~~~~~~~~ll~~l~~-~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-- 80 (433)
+..|++...........+++.+.. .....++.+|||||||+|.++..++. . + .+++|+|+|+.|++.|+++.
T Consensus 9 a~~y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~-~---~-~~v~~vD~s~~~~~~a~~~~~~ 83 (263)
T 2yqz_A 9 AYAYDRLRAHPPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIA-R---G-YRYIALDADAAMLEVFRQKIAG 83 (263)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHT-T---T-CEEEEEESCHHHHHHHHHHTTT
T ss_pred HHHHhhhcccChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHH-C---C-CEEEEEECCHHHHHHHHHHhhc
Confidence 567777665555566666666644 22346788999999999999954443 2 2 59999999999999999986
Q ss_pred CCCCeEEEEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 81 TNPKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 81 ~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
...++++.++|+...++++ ++||+|++..++||+++...+++++.++|+|||.+++.
T Consensus 84 ~~~~~~~~~~d~~~~~~~~---~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 84 VDRKVQVVQADARAIPLPD---ESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCTTEEEEESCTTSCCSCT---TCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCceEEEEcccccCCCCC---CCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 3468999999998766544 78999999999999999999999999999999999887
No 11
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=1.6e-18 Score=166.00 Aligned_cols=110 Identities=28% Similarity=0.517 Sum_probs=93.1
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccC
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
.+++.+...++.+|||||||+|.++..++. + + .+|+|+|+|+.|++.|+++. .++.+.++|+...++ ++
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~-~-~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~----~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---S-G-AEVLGTDNAATMIEKARQNY--PHLHFDVADARNFRV----DK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH---T-T-CEEEEEESCHHHHHHHHHHC--TTSCEEECCTTTCCC----SS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh---C-C-CeEEEEECCHHHHHHHHhhC--CCCEEEECChhhCCc----CC
Confidence 344455557889999999999999954443 2 2 59999999999999999986 688999999988654 27
Q ss_pred cEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 104 KFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+||+|++..+++|+.++..++++++++|||||.+++..+..
T Consensus 117 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 89999999999999999999999999999999999876543
No 12
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=99.77 E-value=6.8e-19 Score=162.92 Aligned_cols=117 Identities=17% Similarity=0.123 Sum_probs=108.6
Q ss_pred ceeeeeccccCceEE-EccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCC-c--hhHHHHHHHHHHHHHHHHHhccC
Q psy11646 166 VRTYRCLLFTGVIQV-QGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLH-D--LDEHLQGLLLIGALNITTFLLKP 241 (433)
Q Consensus 166 ~r~~~m~pl~gv~~i-qgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~-~--~D~~~~~~L~~~al~ia~~~L~~ 241 (433)
+++.-|.|++|..++ ++|++.+.+. .++|+|+|||+|+.+|.+ . .||.+.+.| ++.+|..+|+|
T Consensus 179 k~v~wi~Pi~GAt~~~~lDfg~p~~~---------~k~DvV~SDMApn~sGh~yqQC~DHarii~L---al~fA~~vLkP 246 (320)
T 2hwk_A 179 KMVDWLSDRPEATFRARLDLGIPGDV---------PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSM---LTKKACLHLNP 246 (320)
T ss_dssp SEEEEEESSTTCSEECCGGGCSCTTS---------CCEEEEEEECCCCCCSCHHHHHHHHHHHHHH---THHHHGGGEEE
T ss_pred ceeEeeccCCCceeecccccCCcccc---------CcCCEEEEcCCCCCCCccccccchHHHHHHH---HHHHHHHhcCC
Confidence 455557899999999 9999987776 569999999999999999 8 899999999 99999999999
Q ss_pred CCeEEEEEeecC--CHHHHHHHHhcccceeEEecCCCCcccccceeEEEeeccCCC
Q psy11646 242 GGTFVGKIFRSR--NVVCLETKFQIFFENVSIAKPKSSRNSSIESFIVCQNYRPPK 295 (433)
Q Consensus 242 gG~fv~Kif~g~--~~~~~~~~l~~~F~~v~~~KP~~sr~~s~E~~~v~~~~~~~~ 295 (433)
||+||+|+|.|. ..+.+...+++.|+.|...||+|||+ |.|.|+|+++|++..
T Consensus 247 GGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ASR~-StEvf~La~gf~g~~ 301 (320)
T 2hwk_A 247 GGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSSLE-ETEVLFVFIGYDRKA 301 (320)
T ss_dssp EEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTCCS-TTCEEEEEEEECCCC
T ss_pred CceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCCCccc-cceEEEEEEeecCCc
Confidence 999999999999 58999999999999999999999999 999999999999854
No 13
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.74 E-value=1.7e-17 Score=146.36 Aligned_cols=154 Identities=21% Similarity=0.330 Sum_probs=113.1
Q ss_pred HHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc----
Q psy11646 22 LSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN---- 96 (433)
Q Consensus 22 l~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~---- 96 (433)
+.++++.+. .+++.+|||+|||+|.++..+ ++..+.+ .+++|+|+++ +++. .++++.++|+.+.+
T Consensus 10 l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l-~~~~~~~-~~v~~~D~~~-~~~~-------~~~~~~~~d~~~~~~~~~ 79 (180)
T 1ej0_A 10 LDEIQQSDKLFKPGMTVVDLGAAPGGWSQYV-VTQIGGK-GRIIACDLLP-MDPI-------VGVDFLQGDFRDELVMKA 79 (180)
T ss_dssp HHHHHHHHCCCCTTCEEEEESCTTCHHHHHH-HHHHCTT-CEEEEEESSC-CCCC-------TTEEEEESCTTSHHHHHH
T ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHH-HHHhCCC-CeEEEEECcc-cccc-------CcEEEEEcccccchhhhh
Confidence 344555555 467889999999999999544 4442222 4999999999 6532 57899999998754
Q ss_pred ccc-cccCcEeEEEEcccccchhhH-----------HHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccc
Q psy11646 97 LES-IFLAKFNKIFSFYCLHWVQDQ-----------RQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYT 164 (433)
Q Consensus 97 l~~-~~~~~fD~Vis~~~l~~~~d~-----------~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~ 164 (433)
++. ...++||+|+++.++++..+. ..+++++.++|+|||.+++...
T Consensus 80 ~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~---------------------- 137 (180)
T 1ej0_A 80 LLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF---------------------- 137 (180)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE----------------------
T ss_pred hhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe----------------------
Confidence 111 223789999999988876543 5677777777887777776542
Q ss_pred cceeeeeccccCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCe
Q psy11646 165 QVRTYRCLLFTGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGT 244 (433)
Q Consensus 165 ~~r~~~m~pl~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~ 244 (433)
T Consensus 138 -------------------------------------------------------------------------------- 137 (180)
T 1ej0_A 138 -------------------------------------------------------------------------------- 137 (180)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEeecCCHHHHHHHHhcccceeEEecCCCCcccccceeEEEeeccC
Q psy11646 245 FVGKIFRSRNVVCLETKFQIFFENVSIAKPKSSRNSSIESFIVCQNYRP 293 (433)
Q Consensus 245 fv~Kif~g~~~~~~~~~l~~~F~~v~~~KP~~sr~~s~E~~~v~~~~~~ 293 (433)
.......+...++..|+.+.+.+|.++|..+.|.|+||+++++
T Consensus 138 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (180)
T 1ej0_A 138 ------QGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP 180 (180)
T ss_dssp ------SSTTHHHHHHHHHHHEEEEEEECCTTSCTTCCEEEEEEEEECC
T ss_pred ------cCCcHHHHHHHHHHhhhhEEeecCCcccccCceEEEEEccCCC
Confidence 2333445566667789999999999999999999999999974
No 14
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.74 E-value=5.7e-18 Score=161.12 Aligned_cols=118 Identities=21% Similarity=0.442 Sum_probs=93.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccC
Q psy11646 19 AKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIAD 94 (433)
Q Consensus 19 ~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~ 94 (433)
.+++..++... .+++.+|||||||+|..+.. +++..+..+.+|+|+|+|+.|++.|+++. ...++++.++|+.+
T Consensus 57 ~~~i~~l~~~~-~~~~~~vLDlGcGtG~~~~~-la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~ 134 (261)
T 4gek_A 57 ISMIGMLAERF-VQPGTQVYDLGCSLGAATLS-VRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD 134 (261)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEETCTTTHHHHH-HHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT
T ss_pred HHHHHHHHHHh-CCCCCEEEEEeCCCCHHHHH-HHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc
Confidence 34444455443 36899999999999999944 44444333369999999999999999986 23579999999988
Q ss_pred CcccccccCcEeEEEEcccccchhh--HHHHHHHHHHhccCCCEEEEEecc
Q psy11646 95 QNLESIFLAKFNKIFSFYCLHWVQD--QRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 95 ~~l~~~~~~~fD~Vis~~~l~~~~d--~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.++ +.||+|+++.++||+++ ...++++++++|||||.+++.+..
T Consensus 135 ~~~-----~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 135 IAI-----ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp CCC-----CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ccc-----cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 654 46999999999999864 457899999999999999998654
No 15
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.74 E-value=2.1e-17 Score=153.78 Aligned_cols=178 Identities=17% Similarity=0.289 Sum_probs=117.9
Q ss_pred HHHHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCc
Q psy11646 19 AKLLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQN 96 (433)
Q Consensus 19 ~~ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~ 96 (433)
......++..+. ..++.+|||||||+|.++ ..++...+. .+++|+|+|+.+++.|+++. ...++++.++|+.+.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~-~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~ 105 (234)
T 3dtn_A 29 DDFYGVSVSIASVDTENPDILDLGAGTGLLS-AFLMEKYPE--ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD 105 (234)
T ss_dssp HHHHHHHHHTCCCSCSSCEEEEETCTTSHHH-HHHHHHCTT--CEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC
T ss_pred HHHHHHHHHHhhcCCCCCeEEEecCCCCHHH-HHHHHhCCC--CeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC
Confidence 344455666665 356889999999999999 455555543 49999999999999999998 3348999999998865
Q ss_pred ccccccCcEeEEEEcccccchhhHH--HHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeeccc
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQR--QAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLLF 174 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~~--~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~pl 174 (433)
.+ ++||+|++..+++|+++.. .++++++++|||||.+++.+.............. ..|..+..........+
T Consensus 106 ~~----~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 179 (234)
T 3dtn_A 106 FE----EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNK--TIWRQYVENSGLTEEEI 179 (234)
T ss_dssp CC----SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHH--HHHHHHHHTSSCCHHHH
T ss_pred CC----CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHH--HHHHHHHHhcCCCHHHH
Confidence 44 7899999999999997655 5899999999999999998755433221111111 22322221111100000
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEE
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVV 206 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVv 206 (433)
.... .........+.+++..++...+|..|-
T Consensus 180 ~~~~-~~~~~~~~~~~~~~~~ll~~aGF~~v~ 210 (234)
T 3dtn_A 180 AAGY-ERSKLDKDIEMNQQLNWLKEAGFRDVS 210 (234)
T ss_dssp HTTC-----CCCCCBHHHHHHHHHHTTCEEEE
T ss_pred HHHH-HhcccccccCHHHHHHHHHHcCCCcee
Confidence 0000 011233445677777888777777653
No 16
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.73 E-value=1e-17 Score=158.96 Aligned_cols=124 Identities=20% Similarity=0.320 Sum_probs=94.1
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC
Q psy11646 3 KATLYETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN 82 (433)
Q Consensus 3 ~a~~Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~ 82 (433)
.|+.|++.++..... +++.+.+.. ..+.+|||||||+|..+ ..++.. +.+|+|+|+|+.|++.|+++
T Consensus 14 ~a~~Y~~~Rp~yp~~---l~~~l~~~~--~~~~~vLDvGcGtG~~~-~~l~~~----~~~v~gvD~s~~ml~~a~~~--- 80 (257)
T 4hg2_A 14 VADAYRAFRPRYPRA---LFRWLGEVA--PARGDALDCGCGSGQAS-LGLAEF----FERVHAVDPGEAQIRQALRH--- 80 (257)
T ss_dssp ------CCCCCCCHH---HHHHHHHHS--SCSSEEEEESCTTTTTH-HHHHTT----CSEEEEEESCHHHHHTCCCC---
T ss_pred HHHHHHHHCCCcHHH---HHHHHHHhc--CCCCCEEEEcCCCCHHH-HHHHHh----CCEEEEEeCcHHhhhhhhhc---
Confidence 366777766554333 344444433 34679999999999999 455532 25999999999999988765
Q ss_pred CCeEEEEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 83 PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 83 ~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+++++.++|+++.++++ ++||+|++..++||+ +.+.++++++|+|||||.+++...+
T Consensus 81 ~~v~~~~~~~e~~~~~~---~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 81 PRVTYAVAPAEDTGLPP---ASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp TTEEEEECCTTCCCCCS---SCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCceeehhhhhhhcccC---CcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECC
Confidence 68999999999887765 899999999999998 5788999999999999999887654
No 17
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.72 E-value=7e-18 Score=164.00 Aligned_cols=89 Identities=18% Similarity=0.139 Sum_probs=76.7
Q ss_pred CCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC--HHHHHHHHhcccceeEEecCCCCc
Q psy11646 201 KVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN--VVCLETKFQIFFENVSIAKPKSSR 278 (433)
Q Consensus 201 ~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~--~~~~~~~l~~~F~~v~~~KP~~sr 278 (433)
.+|+|+||++++ +|.+..|+..+. .++..+.++|+|||.|++|+|.+.+ ...++..++..|..|.+.|| +||
T Consensus 148 ~fD~V~sd~~~~-~g~~~~d~~~~l----~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~~f~~v~~~kP-~sR 221 (305)
T 2p41_A 148 RCDTLLCDIGES-SPNPTVEAGRTL----RVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQRKHGGALVRNP-LSR 221 (305)
T ss_dssp CCSEEEECCCCC-CSSHHHHHHHHH----HHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCT-TSC
T ss_pred CCCEEEECCccc-cCcchhhHHHHH----HHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHHHcCCEEEecC-CCC
Confidence 588888888887 787777766553 4778888999999999999999955 56889999999999999999 999
Q ss_pred ccccceeEEEeeccCCC
Q psy11646 279 NSSIESFIVCQNYRPPK 295 (433)
Q Consensus 279 ~~s~E~~~v~~~~~~~~ 295 (433)
+.|.|.|++|.+|+...
T Consensus 222 ~~s~E~y~v~~~~~~~~ 238 (305)
T 2p41_A 222 NSTHEMYWVSNASGNIV 238 (305)
T ss_dssp TTCCCEEEETTCCCCHH
T ss_pred CccHHHHHHHhccCCcc
Confidence 99999999999997543
No 18
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.71 E-value=1.5e-17 Score=158.37 Aligned_cols=93 Identities=15% Similarity=0.081 Sum_probs=76.8
Q ss_pred CCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC--eEEEEEeecCCHH---HHHHHHhcccceeEEecCC
Q psy11646 201 KVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG--TFVGKIFRSRNVV---CLETKFQIFFENVSIAKPK 275 (433)
Q Consensus 201 ~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG--~fv~Kif~g~~~~---~~~~~l~~~F~~v~~~KP~ 275 (433)
.+|+|+||++ +.++.+..|+..+.. ++..+.++|+||| .|++|+|. .+.. .++..++..|..|.+.| .
T Consensus 140 ~fD~V~sd~~-~~~~~~~~d~~~~l~----~L~~~~r~LkpGG~~~fv~kv~~-~~~~~~~~~l~~l~~~f~~v~~~k-~ 212 (265)
T 2oxt_A 140 RTDVIMCDVG-ESSPKWSVESERTIK----ILELLEKWKVKNPSADFVVKVLC-PYSVEVMERLSVMQRKWGGGLVRN-P 212 (265)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHH----HHHHHHHHHHHCTTCEEEEEESC-TTSHHHHHHHHHHHHHHCCEEECC-T
T ss_pred CCcEEEEeCc-ccCCccchhHHHHHH----HHHHHHHHhccCCCeEEEEEeCC-CCChhHHHHHHHHHHHcCCEEEEE-e
Confidence 5677777777 667776666665433 6788889999999 99999999 6655 88889999999999999 8
Q ss_pred CCcccccceeEEEeeccCCCCCCCC
Q psy11646 276 SSRNSSIESFIVCQNYRPPKDYVPT 300 (433)
Q Consensus 276 ~sr~~s~E~~~v~~~~~~~~~~~~~ 300 (433)
+||++|.|+|+||.++..+.++++.
T Consensus 213 ~sR~~s~E~y~v~~~~~~~~~~~~~ 237 (265)
T 2oxt_A 213 YSRNSTHEMYFTSRAGGNIIGAVTA 237 (265)
T ss_dssp TSCTTCCCEEEESSCCSCHHHHHHH
T ss_pred cccCCCccEEEEecCCCCcchhhHH
Confidence 9999999999999988777766654
No 19
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.68 E-value=2.1e-16 Score=150.81 Aligned_cols=113 Identities=26% Similarity=0.521 Sum_probs=95.0
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCccccc
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESI 100 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~ 100 (433)
.+.......++.+|||||||+|.++ ..++...+. .+++|+|+|+.+++.|+++. ...++++.+.|+...+++.
T Consensus 28 ~l~~~~~~~~~~~vLDiG~G~G~~~-~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~- 103 (276)
T 3mgg_A 28 LLHHDTVYPPGAKVLEAGCGIGAQT-VILAKNNPD--AEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFED- 103 (276)
T ss_dssp HHHTTCCCCTTCEEEETTCTTSHHH-HHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCT-
T ss_pred HHhhcccCCCCCeEEEecCCCCHHH-HHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCC-
Confidence 3334444568899999999999999 455555544 49999999999999999987 3468999999998866554
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
++||+|++..+++|++++..+++++.++|||||.+++...
T Consensus 104 --~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 104 --SSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp --TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --CCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 8999999999999999999999999999999999999764
No 20
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.68 E-value=2.3e-16 Score=145.08 Aligned_cols=117 Identities=18% Similarity=0.200 Sum_probs=97.1
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccc
Q psy11646 23 SQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLES 99 (433)
Q Consensus 23 ~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~ 99 (433)
..++..+...++.+|||+|||+|.++..++....+. .+++|+|+|+.+++.|++++ ...++++.++|+...+++.
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEK--GKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTT--CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 345555666788999999999999994444332233 49999999999999999987 3357999999998866554
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
++||+|+++.+++|++++..+++++.++|+|||.+++.....
T Consensus 105 ---~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 105 ---NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp ---SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ---CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 889999999999999999999999999999999999986543
No 21
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.68 E-value=2.8e-16 Score=148.61 Aligned_cols=113 Identities=25% Similarity=0.443 Sum_probs=94.7
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCccc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~ 98 (433)
+..+++.+...++.+|||||||+|.++ ..++... .+++|+|+|+.|++.|+++. +..++.+.++|++..+++
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~-~~l~~~~----~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVA-NAFAPFV----KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHH-HHHGGGS----SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSC
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHH-HHHHHhC----CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCC
Confidence 445555666678999999999999999 4454432 39999999999999999886 335799999999887655
Q ss_pred ccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
+ ++||+|+++.++||++++..++++++++|||||.+++...
T Consensus 101 ~---~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 101 D---ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp T---TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C---CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 4 8999999999999999999999999999999999998754
No 22
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.68 E-value=8.8e-17 Score=154.00 Aligned_cols=93 Identities=20% Similarity=0.125 Sum_probs=71.4
Q ss_pred CCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC--eEEEEEeecCCHH---HHHHHHhcccceeEEecCC
Q psy11646 201 KVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG--TFVGKIFRSRNVV---CLETKFQIFFENVSIAKPK 275 (433)
Q Consensus 201 ~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG--~fv~Kif~g~~~~---~~~~~l~~~F~~v~~~KP~ 275 (433)
.+|+|+||++ ..++.+..|+..+.. ++..+.++|+||| .|++|+|. ++.. .++..++..|..+.+. |.
T Consensus 148 ~fD~Vvsd~~-~~~~~~~~d~~~~l~----~L~~~~r~LkpGG~~~~v~~~~~-~~~~~~~~~l~~l~~~f~~v~v~-P~ 220 (276)
T 2wa2_A 148 QADTVLCDIG-ESNPTAAVEASRTLT----VLNVISRWLEYNQGCGFCVKVLN-PYSCDVLEALMKMQARFGGGLIR-VP 220 (276)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHH----HHHHHHHHHHHSTTCEEEEEESC-CCSHHHHHHHHHHHHHHCCEEEC-CT
T ss_pred CcCEEEECCC-cCCCchhhhHHHHHH----HHHHHHHHhccCCCcEEEEEeCC-CCchhHHHHHHHHHHHcCCEEEE-cC
Confidence 4566666666 555555555554433 6777888999999 99999999 5555 7788899999999999 99
Q ss_pred CCcccccceeEEEeeccCCCCCCCC
Q psy11646 276 SSRNSSIESFIVCQNYRPPKDYVPT 300 (433)
Q Consensus 276 ~sr~~s~E~~~v~~~~~~~~~~~~~ 300 (433)
+||++|.|+|+||.++....+..++
T Consensus 221 ~sR~~s~E~y~v~~~~~~~~~~~~~ 245 (276)
T 2wa2_A 221 LSRNSTHEMYFVSGIKNNIMGNVTA 245 (276)
T ss_dssp TSCTTCCCEEEESSCCCCHHHHHHH
T ss_pred CCCCcchheEEecccCCCcchhHHH
Confidence 9999999999999887655544433
No 23
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.66 E-value=4.2e-16 Score=148.31 Aligned_cols=122 Identities=25% Similarity=0.452 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEe
Q psy11646 15 QLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVA 90 (433)
Q Consensus 15 ~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~ 90 (433)
......+++.+++.+...++.+|||||||+|..+..++. .. + .+++|+|+|+.+++.|+++. + ..++++.++
T Consensus 43 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~--~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 118 (273)
T 3bus_A 43 DDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLAT-AR--D-VRVTGISISRPQVNQANARATAAGLANRVTFSYA 118 (273)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHH-HS--C-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHH-hc--C-CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC
Confidence 345667778888888888899999999999999954443 32 2 59999999999999999886 1 347999999
Q ss_pred cccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 91 NIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 91 Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
|+.+.++++ ++||+|++..+++|+++...+++++.++|||||.+++..+.
T Consensus 119 d~~~~~~~~---~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 119 DAMDLPFED---ASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp CTTSCCSCT---TCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ccccCCCCC---CCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 998866554 89999999999999999999999999999999999998754
No 24
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.66 E-value=5e-16 Score=142.15 Aligned_cols=122 Identities=22% Similarity=0.318 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEec
Q psy11646 16 LDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVAN 91 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~D 91 (433)
+....+...+++.+..+++ +|||+|||+|.++..+ +.. +. .+++|+|+|+.+++.|++++ ...++++.++|
T Consensus 27 ~~~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l-~~~-~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d 101 (219)
T 3dlc_A 27 PIYPIIAENIINRFGITAG-TCIDIGSGPGALSIAL-AKQ-SD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGD 101 (219)
T ss_dssp THHHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHH-HHH-SE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECB
T ss_pred cccHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHH-HHc-CC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcC
Confidence 3445566677777766666 9999999999999444 433 22 59999999999999999986 23579999999
Q ss_pred ccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 92 IADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 92 i~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
+.+.+++. ++||+|+++.+++|++++..+++++.++|+|||.+++......
T Consensus 102 ~~~~~~~~---~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 152 (219)
T 3dlc_A 102 VHNIPIED---NYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGN 152 (219)
T ss_dssp TTBCSSCT---TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSS
T ss_pred HHHCCCCc---ccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCc
Confidence 98866554 8999999999999999999999999999999999999864443
No 25
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.66 E-value=9.5e-16 Score=144.31 Aligned_cols=115 Identities=23% Similarity=0.381 Sum_probs=96.6
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIF 101 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~ 101 (433)
...+.+.+...++.+|||||||+|.++..++. . +..+++|+|+|+.+++.|+++....++++.++|+...+++.
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~-~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~-- 106 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAE-H---GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEP-- 106 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHH-T---TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCT--
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHH-c---CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCC--
Confidence 34556666656889999999999999944443 2 21389999999999999999986678999999998766544
Q ss_pred cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 102 LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
++||+|++..+++|++++..++++++++|||||.+++....
T Consensus 107 -~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 107 -DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp -TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 89999999999999999999999999999999999987543
No 26
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.66 E-value=1.5e-15 Score=141.58 Aligned_cols=115 Identities=27% Similarity=0.498 Sum_probs=96.1
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccccc
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESI 100 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~ 100 (433)
++..+...+ +++.+|||||||+|.++..++. . + .+++|+|+|+.+++.|+++....++++.++|+.+.+++.
T Consensus 43 ~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~-~---~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~- 114 (242)
T 3l8d_A 43 IIPFFEQYV--KKEAEVLDVGCGDGYGTYKLSR-T---G-YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFEN- 114 (242)
T ss_dssp HHHHHHHHS--CTTCEEEEETCTTSHHHHHHHH-T---T-CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCT-
T ss_pred HHHHHHHHc--CCCCeEEEEcCCCCHHHHHHHH-c---C-CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCC-
Confidence 444444444 4788999999999999954443 2 2 599999999999999999875678999999998876544
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
++||+|++..+++|++++..+++++.++|+|||.+++......
T Consensus 115 --~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 115 --EQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp --TCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred --CCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 8999999999999999999999999999999999999875443
No 27
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.66 E-value=1.4e-15 Score=141.94 Aligned_cols=106 Identities=18% Similarity=0.311 Sum_probs=90.6
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSF 111 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~ 111 (433)
.++.+|||||||+|.++ ..++.. + .+++|+|+|+.+++.|+++... ++++.++|+++. .+ +++||+|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~-~~l~~~---~-~~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d~~~~-~~---~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFT-SRLQEH---F-NDITCVEASEEAISHAQGRLKD-GITYIHSRFEDA-QL---PRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHH-HHHTTT---C-SCEEEEESCHHHHHHHHHHSCS-CEEEEESCGGGC-CC---SSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHH-HHHHHh---C-CcEEEEeCCHHHHHHHHHhhhC-CeEEEEccHHHc-Cc---CCcccEEEEh
Confidence 46789999999999999 455432 2 4899999999999999999743 899999999876 23 3889999999
Q ss_pred ccccchhhHHHHHHHHH-HhccCCCEEEEEeccCCch
Q psy11646 112 YCLHWVQDQRQAISNIY-NLLMPGGEVLLLLNAFNPI 147 (433)
Q Consensus 112 ~~l~~~~d~~~~l~~i~-~~LkpGG~lll~~~~~~p~ 147 (433)
.++||++++..++++++ ++|||||.+++..+.....
T Consensus 111 ~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~ 147 (250)
T 2p7i_A 111 HVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAV 147 (250)
T ss_dssp SCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCH
T ss_pred hHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHH
Confidence 99999999999999999 9999999999988765543
No 28
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.66 E-value=5.9e-16 Score=140.61 Aligned_cols=83 Identities=22% Similarity=0.216 Sum_probs=78.0
Q ss_pred CCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC--HHHHHHHHhcccceeEEecCCC
Q psy11646 199 DEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN--VVCLETKFQIFFENVSIAKPKS 276 (433)
Q Consensus 199 ~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~--~~~~~~~l~~~F~~v~~~KP~~ 276 (433)
..++|+++||++| .+|....|+.++.. +|+++..+|++ |+|++|+|.+.. +..+...++..|..+.+.||.
T Consensus 142 ~~~~DtllcDIge-Ss~~~~vE~~Rtlr----vLela~~wL~~-~~fc~KVl~py~p~v~e~l~~lq~~fgg~lVR~P~- 214 (267)
T 3p8z_A 142 PEKCDTLLCDIGE-SSPSPTVEESRTIR----VLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERLQRKHGGMLVRNPL- 214 (267)
T ss_dssp CCCCSEEEECCCC-CCSCHHHHHHHHHH----HHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCTT-
T ss_pred CccccEEEEecCC-CCCChhhhhhHHHH----HHHHHHHhccc-CCEEEEEccCCChhHHHHHHHHHHHhCCEeEeCCC-
Confidence 3579999999999 99999999999877 99999999998 899999999999 779999999999999999999
Q ss_pred CcccccceeEEE
Q psy11646 277 SRNSSIESFIVC 288 (433)
Q Consensus 277 sr~~s~E~~~v~ 288 (433)
||++|.|.|+|.
T Consensus 215 SRnsThEMY~Vs 226 (267)
T 3p8z_A 215 SRNSTHEMYWIS 226 (267)
T ss_dssp SCTTCCCEEEES
T ss_pred CCCCcceEEEEe
Confidence 999999999994
No 29
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.66 E-value=4e-16 Score=145.88 Aligned_cols=136 Identities=15% Similarity=0.245 Sum_probs=100.6
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHHHhcCC-CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC
Q psy11646 3 KATLYETNNSMQQLDAAKLLSQYIDQFKW-TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT 81 (433)
Q Consensus 3 ~a~~Y~~~~~~~~~~~~~ll~~l~~~l~~-~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~ 81 (433)
....|.......+.....+...+...+.. +++.+|||||||+|.++. .++.. + .+++|+|+|+.+++.|+++
T Consensus 10 ~~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~-~l~~~---~-~~v~gvD~s~~~~~~a~~~-- 82 (240)
T 3dli_A 10 TSDYYFLFEEKFRGSRELVKARLRRYIPYFKGCRRVLDIGCGRGEFLE-LCKEE---G-IESIGVDINEDMIKFCEGK-- 82 (240)
T ss_dssp --CHHHHHHHHHTCCHHHHHHHHGGGGGGTTTCSCEEEETCTTTHHHH-HHHHH---T-CCEEEECSCHHHHHHHHTT--
T ss_pred hHHHHHHHHHHhCCCHHHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHH-HHHhC---C-CcEEEEECCHHHHHHHHhh--
Confidence 44556555444444445555555555442 467899999999999994 44433 2 4899999999999999975
Q ss_pred CCCeEEEEecccCCcccccccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEEeccCCchhh
Q psy11646 82 NPKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLLNAFNPIYD 149 (433)
Q Consensus 82 ~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~ 149 (433)
+++..+|+.+. ..+..+++||+|++..+++|++ +...+++++.++|||||.+++..+.......
T Consensus 83 ---~~~~~~d~~~~-~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 148 (240)
T 3dli_A 83 ---FNVVKSDAIEY-LKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYS 148 (240)
T ss_dssp ---SEEECSCHHHH-HHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHH
T ss_pred ---cceeeccHHHH-hhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHH
Confidence 78888888764 1112348999999999999998 4589999999999999999998876554433
No 30
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.65 E-value=5.2e-16 Score=141.83 Aligned_cols=114 Identities=15% Similarity=0.194 Sum_probs=90.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC---------------CCCe
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT---------------NPKL 85 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~---------------~~~i 85 (433)
.+..++..+...++.+|||+|||+|..+. .+++. + .+|+|+|+|+.|++.|+++.. ..++
T Consensus 10 ~l~~~~~~l~~~~~~~vLD~GCG~G~~~~-~la~~---g-~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v 84 (203)
T 1pjz_A 10 DLQQYWSSLNVVPGARVLVPLCGKSQDMS-WLSGQ---G-YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGI 84 (203)
T ss_dssp HHHHHHHHHCCCTTCEEEETTTCCSHHHH-HHHHH---C-CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSS
T ss_pred HHHHHHHhcccCCCCEEEEeCCCCcHhHH-HHHHC---C-CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCcc
Confidence 34455566666788999999999999994 44432 3 599999999999999998852 3579
Q ss_pred EEEEecccCCcccccccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEEe
Q psy11646 86 EFVVANIADQNLESIFLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 86 ~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
++.++|+.+.+..+ .++||+|++..++++++ +...++++++++|||||++++..
T Consensus 85 ~~~~~d~~~l~~~~--~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 85 EIWCGDFFALTARD--IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp EEEEECCSSSTHHH--HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred EEEECccccCCccc--CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 99999998865431 15899999999999885 45678999999999999855544
No 31
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.65 E-value=2e-14 Score=131.33 Aligned_cols=130 Identities=21% Similarity=0.267 Sum_probs=100.3
Q ss_pred hhhhhhhhhhcHH-HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC
Q psy11646 4 ATLYETNNSMQQL-DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN 82 (433)
Q Consensus 4 a~~Y~~~~~~~~~-~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~ 82 (433)
++.|+........ ...+...+++..+.. ++.+|||||||+|.++ ..+ +..+++|+|+|+.|++.|+++.
T Consensus 7 a~~y~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~vLdiG~G~G~~~-~~l------~~~~v~~vD~s~~~~~~a~~~~-- 76 (211)
T 2gs9_A 7 AEAYEAWYGTPLGAYVIAEEERALKGLLP-PGESLLEVGAGTGYWL-RRL------PYPQKVGVEPSEAMLAVGRRRA-- 76 (211)
T ss_dssp TTTTTGGGGSHHHHHHHHHHHHHHHTTCC-CCSEEEEETCTTCHHH-HHC------CCSEEEEECCCHHHHHHHHHHC--
T ss_pred HHHHHHHhcccchhhhHHHHHHHHHHhcC-CCCeEEEECCCCCHhH-HhC------CCCeEEEEeCCHHHHHHHHHhC--
Confidence 5556654332221 112333344544433 7889999999999998 343 2128999999999999999987
Q ss_pred CCeEEEEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 83 PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 83 ~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
.++++.++|+...++++ ++||+|++..+++|++++..+++++.++|||||.+++..+....
T Consensus 77 ~~~~~~~~d~~~~~~~~---~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 77 PEATWVRAWGEALPFPG---ESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp TTSEEECCCTTSCCSCS---SCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred CCcEEEEcccccCCCCC---CcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 68899999998866544 78999999999999999999999999999999999998876554
No 32
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.65 E-value=3.4e-16 Score=147.39 Aligned_cols=118 Identities=16% Similarity=0.173 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANI 92 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di 92 (433)
.....+..++..+..+++.+|||||||+|..+.. +++.. + .+++|+|+|+.|++.|+++. + ..++++.++|+
T Consensus 20 ~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~-la~~~--~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~ 95 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCT-WARDH--G-ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA 95 (256)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHH-HHHHT--C-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHH-HHHhc--C-CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh
Confidence 3445666777777778899999999999999944 44433 2 48999999999999999886 2 24799999999
Q ss_pred cCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 93 ADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 93 ~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
.+.+. +++||+|++..+++|++++..++++++++|||||.+++..+
T Consensus 96 ~~~~~----~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 96 AGYVA----NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp TTCCC----SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred HhCCc----CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 88654 38899999999999999999999999999999999999764
No 33
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.65 E-value=9.8e-16 Score=144.71 Aligned_cols=119 Identities=18% Similarity=0.339 Sum_probs=101.2
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC-CCeEEEEecccCCcc
Q psy11646 19 AKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN-PKLEFVVANIADQNL 97 (433)
Q Consensus 19 ~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~-~~i~~~~~Di~~~~l 97 (433)
...+..+++.+...++.+|||||||+|.++..++... + .+|+|+|+|+.+++.|+++... .++++.++|+...++
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~ 116 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY---G-AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEF 116 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH---C-CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc---C-CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCC
Confidence 3456777888877889999999999999995554432 2 5999999999999999999833 789999999988765
Q ss_pred cccccCcEeEEEEcccccch--hhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 98 ESIFLAKFNKIFSFYCLHWV--QDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~--~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+. ++||+|++..++||+ +++..+++++.++|||||.+++..+..
T Consensus 117 ~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 117 PE---NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp CT---TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CC---CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 54 899999999999999 899999999999999999999987543
No 34
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.64 E-value=6.8e-15 Score=139.31 Aligned_cols=112 Identities=21% Similarity=0.355 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN 96 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~ 96 (433)
....++..+...+ +++.+|||||||+|.++. .++.. + .+++|+|+|+.+++.|+++. .++++.++|+...+
T Consensus 36 ~~~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~-~l~~~---~-~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~ 106 (263)
T 3pfg_A 36 EAADLAALVRRHS--PKAASLLDVACGTGMHLR-HLADS---F-GTVEGLELSADMLAIARRRN--PDAVLHHGDMRDFS 106 (263)
T ss_dssp HHHHHHHHHHHHC--TTCCEEEEETCTTSHHHH-HHTTT---S-SEEEEEESCHHHHHHHHHHC--TTSEEEECCTTTCC
T ss_pred HHHHHHHHHHhhC--CCCCcEEEeCCcCCHHHH-HHHHc---C-CeEEEEECCHHHHHHHHhhC--CCCEEEECChHHCC
Confidence 3444444444443 457899999999999994 44432 2 58999999999999999986 48999999998865
Q ss_pred ccccccCcEeEEEEcc-cccchh---hHHHHHHHHHHhccCCCEEEEEe
Q psy11646 97 LESIFLAKFNKIFSFY-CLHWVQ---DQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~-~l~~~~---d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
. .++||+|++.. +++|+. +...+++++.++|||||.+++..
T Consensus 107 ~----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 107 L----GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp C----SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred c----cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 5 38999999998 999984 66788999999999999999864
No 35
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.64 E-value=1.8e-15 Score=141.51 Aligned_cols=112 Identities=21% Similarity=0.369 Sum_probs=94.6
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCccccc
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESI 100 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~ 100 (433)
.+++.+..+++.+|||||||+|.++. .++... .+++|+|+|+.|++.|+++. ...++++.++|++..++++
T Consensus 12 ~~~~~~~~~~~~~vLDiGcG~G~~~~-~l~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~- 85 (239)
T 1xxl_A 12 LMIKTAECRAEHRVLDIGAGAGHTAL-AFSPYV----QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD- 85 (239)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHH-HHGGGS----SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT-
T ss_pred hHHHHhCcCCCCEEEEEccCcCHHHH-HHHHhC----CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC-
Confidence 44555666889999999999999994 444332 48999999999999999886 3367999999998866544
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
++||+|++..++||++++..+++++.++|||||.+++....
T Consensus 86 --~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 86 --DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp --TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 89999999999999999999999999999999999987643
No 36
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.64 E-value=1.7e-15 Score=146.07 Aligned_cols=121 Identities=14% Similarity=0.183 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHhc----CCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEE
Q psy11646 16 LDAAKLLSQYIDQF----KWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEF 87 (433)
Q Consensus 16 ~~~~~ll~~l~~~l----~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~ 87 (433)
....+.+..++..+ ...++.+|||||||+|..+..++. .. + .+++|+|+|+.+++.|+++. ...++++
T Consensus 61 ~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~--~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~ 136 (297)
T 2o57_A 61 EASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVR-KF--G-VSIDCLNIAPVQNKRNEEYNNQAGLADNITV 136 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHH-HH--C-CEEEEEESCHHHHHHHHHHHHHHTCTTTEEE
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHH-Hh--C-CEEEEEeCCHHHHHHHHHHHHhcCCCcceEE
Confidence 44556667777777 667899999999999999955544 32 2 49999999999999999876 2357999
Q ss_pred EEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 88 VVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 88 ~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.++|+...++++ ++||+|++..+++|++++..+++++.++|||||.+++.++.
T Consensus 137 ~~~d~~~~~~~~---~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 137 KYGSFLEIPCED---NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EECCTTSCSSCT---TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEcCcccCCCCC---CCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 999998876554 89999999999999999999999999999999999998754
No 37
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.63 E-value=5.1e-15 Score=135.51 Aligned_cols=112 Identities=21% Similarity=0.276 Sum_probs=91.9
Q ss_pred HHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccc
Q psy11646 23 SQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIF 101 (433)
Q Consensus 23 ~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~ 101 (433)
..++..+. ..++.+|||||||+|.++..+ +.. + .+++|+|+|+.+++.|++. ...++++.++|+.+. .+.
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l-~~~---~-~~v~~~D~s~~~~~~a~~~-~~~~~~~~~~d~~~~-~~~-- 105 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHL-SGL---A-DRVTALDGSAEMIAEAGRH-GLDNVEFRQQDLFDW-TPD-- 105 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHH-HHH---S-SEEEEEESCHHHHHHHGGG-CCTTEEEEECCTTSC-CCS--
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHH-Hhc---C-CeEEEEeCCHHHHHHHHhc-CCCCeEEEecccccC-CCC--
Confidence 34444444 457789999999999999444 433 2 5999999999999999984 346899999999876 333
Q ss_pred cCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEeccC
Q psy11646 102 LAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
++||+|++..++||+++. ..+++++.++|+|||.+++.....
T Consensus 106 -~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 106 -RQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp -SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -CceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 899999999999999875 889999999999999999987654
No 38
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.8e-15 Score=146.23 Aligned_cols=132 Identities=23% Similarity=0.381 Sum_probs=100.8
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--
Q psy11646 3 KATLYETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-- 80 (433)
Q Consensus 3 ~a~~Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-- 80 (433)
+++.|++.++.......+.+ .... ..++.+|||||||+|..+..++ ...+.+ .+|+|+|+|+.+++.|+++.
T Consensus 10 ~~~~y~~~rp~y~~~~~~~l---~~~~-~~~~~~vLDiGcG~G~~~~~la-~~~~~~-~~v~gvD~s~~~~~~a~~~~~~ 83 (299)
T 3g5t_A 10 NSERYSSSRPSYPSDFYKMI---DEYH-DGERKLLVDVGCGPGTATLQMA-QELKPF-EQIIGSDLSATMIKTAEVIKEG 83 (299)
T ss_dssp CHHHHHHHSCCCCHHHHHHH---HHHC-CSCCSEEEEETCTTTHHHHHHH-HHSSCC-SEEEEEESCHHHHHHHHHHHHH
T ss_pred ChHHHhhcCCCCCHHHHHHH---HHHh-cCCCCEEEEECCCCCHHHHHHH-HhCCCC-CEEEEEeCCHHHHHHHHHHHHh
Confidence 56677776665544433333 3322 2578999999999999995444 333122 59999999999999999986
Q ss_pred C---CCCeEEEEecccCCcccc---cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 81 T---NPKLEFVVANIADQNLES---IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 81 ~---~~~i~~~~~Di~~~~l~~---~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
. ..++++.++|+++.+++. ...++||+|++..++||+ ++..+++++.++|+|||.+++..
T Consensus 84 ~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 84 SPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp CC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEe
Confidence 2 478999999998865432 112689999999999999 99999999999999999998854
No 39
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.63 E-value=2.2e-15 Score=138.54 Aligned_cols=112 Identities=17% Similarity=0.280 Sum_probs=88.3
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-C-------CCeEEEEecccCC
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-N-------PKLEFVVANIADQ 95 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-~-------~~i~~~~~Di~~~ 95 (433)
.+.+.+...++.+|||||||+|.++ ..+++..+. .+++|+|+|+.+++.|++++. . .++++.++|+...
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~-~~l~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLL-KILLKDSFF--EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHH-HHHHHCTTC--SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHH-HHHHhhCCC--CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 3333333357889999999999999 455544333 499999999999999999862 1 1799999998665
Q ss_pred cccccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEe
Q psy11646 96 NLESIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~ 141 (433)
+.+. ++||+|++..+++|+++. ..+++++.++|||||.++++.
T Consensus 97 ~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 97 DKRF---HGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp CGGG---CSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cccC---CCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 4433 789999999999999855 889999999999999766654
No 40
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.63 E-value=3.4e-15 Score=143.19 Aligned_cols=172 Identities=17% Similarity=0.258 Sum_probs=117.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEecccCC
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVANIADQ 95 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~Di~~~ 95 (433)
+.+..++..+.. ++.+|||||||+|.++..++. . + .+++|+|+|+.+++.|++++ +. .++++.++|+.+.
T Consensus 56 ~~l~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~-~---~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 129 (285)
T 4htf_A 56 QDLDRVLAEMGP-QKLRVLDAGGGEGQTAIKMAE-R---G-HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDV 129 (285)
T ss_dssp HHHHHHHHHTCS-SCCEEEEETCTTCHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGT
T ss_pred HHHHHHHHhcCC-CCCEEEEeCCcchHHHHHHHH-C---C-CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHh
Confidence 345566666653 368999999999999944443 2 2 59999999999999999987 21 5799999999875
Q ss_pred cccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeecccc
Q psy11646 96 NLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLLFT 175 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~pl~ 175 (433)
+ ...+++||+|++..+++|++++..+++++.++|||||.+++..+........ ... .+.|...... .+
T Consensus 130 ~--~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~-~~~~~~~~~~-------~~ 197 (285)
T 4htf_A 130 A--SHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMH--NMV-AGNFDYVQAG-------MP 197 (285)
T ss_dssp G--GGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHH--HHH-TTCHHHHHTT-------CC
T ss_pred h--hhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHH--HHH-hcCHHHHhhh-------cc
Confidence 4 2234899999999999999999999999999999999999987654331111 110 1222111100 00
Q ss_pred CceEEEccccccchHHHHHHhcCCCCCeEEEecC
Q psy11646 176 GVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDG 209 (433)
Q Consensus 176 gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ 209 (433)
.............+..++..++...++.++-..+
T Consensus 198 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~ 231 (285)
T 4htf_A 198 KKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTG 231 (285)
T ss_dssp CC----CCCSCCBCHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccccCCCCCCCCHHHHHHHHHHCCCceeeeee
Confidence 0001111223345678888888888888875443
No 41
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=1.2e-15 Score=144.73 Aligned_cols=126 Identities=14% Similarity=0.291 Sum_probs=98.5
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC
Q psy11646 3 KATLYETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN 82 (433)
Q Consensus 3 ~a~~Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~ 82 (433)
.+..|++...... .+...+.+.+...++.+|||||||+|.++..++. .+ .+|+|+|+|+.|++.|+++.
T Consensus 8 ~a~~y~~~~~~~~----~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~----~~-~~v~gvD~s~~~~~~a~~~~-- 76 (261)
T 3ege_A 8 IGKQYSQTRVPDI----RIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN----QG-LFVYAVEPSIVMRQQAVVHP-- 76 (261)
T ss_dssp -----CCSBCCCH----HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT----TT-CEEEEECSCHHHHHSSCCCT--
T ss_pred HHHHHhhcccccH----HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh----CC-CEEEEEeCCHHHHHHHHhcc--
Confidence 3556666555444 3445556666667889999999999999954443 23 59999999999999888764
Q ss_pred CCeEEEEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 83 PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 83 ~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
++++.++|+++.++++ ++||+|++..++||++++..++++++++|| ||.+++.....
T Consensus 77 -~~~~~~~d~~~~~~~~---~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 77 -QVEWFTGYAENLALPD---KSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp -TEEEECCCTTSCCSCT---TCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred -CCEEEECchhhCCCCC---CCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 8999999998876554 899999999999999999999999999999 99888876543
No 42
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.62 E-value=1.3e-15 Score=141.12 Aligned_cols=107 Identities=24% Similarity=0.459 Sum_probs=89.9
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC--------CCeEEEEecccCCcccccccC
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN--------PKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~--------~~i~~~~~Di~~~~l~~~~~~ 103 (433)
+++.+|||+|||+|.++..++. . + .+++|+|+|+.+++.|+++... .++++.++|+...+++. +
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~-~---~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~ 100 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELAS-K---G-YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHD---S 100 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCT---T
T ss_pred CCCCeEEEECCCCCHHHHHHHh-C---C-CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCC---C
Confidence 5788999999999999954444 2 2 5999999999999999998722 25789999998766544 8
Q ss_pred cEeEEEEcccccchhhHH---HHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 104 KFNKIFSFYCLHWVQDQR---QAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~~---~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
+||+|++..+++|+.+.. .+++++.++|+|||.+++..+....
T Consensus 101 ~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 101 SFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp CEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred ceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 999999999999998776 8999999999999999998765543
No 43
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.62 E-value=3.2e-15 Score=143.57 Aligned_cols=116 Identities=20% Similarity=0.389 Sum_probs=96.0
Q ss_pred HHHHHHhc-CCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCccc
Q psy11646 22 LSQYIDQF-KWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 22 l~~l~~~l-~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~ 98 (433)
+..+++.+ ...++.+|||||||+|.++ ..++...+.+ .+|+|+|+|+.+++.|+++. ...++++.++|+.+.+++
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~-~~l~~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 87 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLG-LVLMPLLPEG-SKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN 87 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHH-HHHTTTSCTT-CEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHH-HHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC
Confidence 33344443 3457899999999999999 5556555543 59999999999999999987 234899999999886543
Q ss_pred ccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
++||+|++..+++|++++..++++++++|||||.+++..+.
T Consensus 88 ----~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 ----DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ----SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 78999999999999999999999999999999999988754
No 44
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.62 E-value=2.3e-15 Score=138.48 Aligned_cols=104 Identities=16% Similarity=0.354 Sum_probs=85.3
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC--------CCeEEEEecccCCcccccccC
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN--------PKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~--------~~i~~~~~Di~~~~l~~~~~~ 103 (433)
.++.+|||||||+|.++ ..++...+. .+++|+|+|+.+++.|++++.. .++++.++|+...+.+. +
T Consensus 28 ~~~~~vLDiGcG~G~~~-~~l~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~ 101 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLL-SLLLKDKSF--EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRF---S 101 (219)
T ss_dssp TTCCEEEEETCTTCHHH-HHHHTSTTC--CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGG---T
T ss_pred cCCCEEEEecCCCCHHH-HHHHhcCCC--CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccccc---C
Confidence 56889999999999999 555544433 4999999999999999998621 17999999997654443 8
Q ss_pred cEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~ 141 (433)
+||+|++..+++|+++. ..+++++.++|||||.++.+.
T Consensus 102 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 102 GYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp TCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred CCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 99999999999999855 789999999999999665543
No 45
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.62 E-value=3.4e-15 Score=141.83 Aligned_cols=116 Identities=16% Similarity=0.266 Sum_probs=95.4
Q ss_pred HHHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccC
Q psy11646 20 KLLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIAD 94 (433)
Q Consensus 20 ~ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~ 94 (433)
..+..++..+. .+++.+|||||||+|.++..+ +.. +. .+++|+|+|+.+++.|+++. + ..++++.++|+.+
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~l-a~~-~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 32 EVTLKALSFIDNLTEKSLIADIGCGTGGQTMVL-AGH-VT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDD 107 (267)
T ss_dssp HHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHH-HTT-CS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHH-Hhc-cC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhh
Confidence 34445556655 567899999999999999544 433 22 49999999999999999987 2 2569999999988
Q ss_pred CcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 95 QNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 95 ~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.+++. ++||+|++..+++|+ ++..+++++.++|||||.+++..+.
T Consensus 108 ~~~~~---~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 108 LPFRN---EELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp CCCCT---TCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred CCCCC---CCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 66544 899999999999999 8899999999999999999998653
No 46
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.62 E-value=4e-15 Score=136.47 Aligned_cols=107 Identities=24% Similarity=0.406 Sum_probs=89.8
Q ss_pred hcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcccccccCcEe
Q psy11646 28 QFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLESIFLAKFN 106 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~~~~~~fD 106 (433)
.+...++.+|||+|||+|.++. .++.. + .+++|+|+|+.+++.|+++. ...++++.++|+.+.+ + .++||
T Consensus 46 ~~~~~~~~~vLDiGcG~G~~~~-~l~~~---~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~---~~~fD 116 (216)
T 3ofk_A 46 SLSSGAVSNGLEIGCAAGAFTE-KLAPH---C-KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-T---AELFD 116 (216)
T ss_dssp HTTTSSEEEEEEECCTTSHHHH-HHGGG---E-EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-C---SCCEE
T ss_pred HcccCCCCcEEEEcCCCCHHHH-HHHHc---C-CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-C---CCCcc
Confidence 4455678899999999999994 44432 2 58999999999999999998 4458999999998865 2 38999
Q ss_pred EEEEcccccchhhH---HHHHHHHHHhccCCCEEEEEecc
Q psy11646 107 KIFSFYCLHWVQDQ---RQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 107 ~Vis~~~l~~~~d~---~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+|+++.++||++++ ..+++++.++|||||.+++..+.
T Consensus 117 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 117 LIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 99999999999876 56799999999999999987643
No 47
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.61 E-value=3.7e-15 Score=144.33 Aligned_cols=122 Identities=20% Similarity=0.288 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEe
Q psy11646 15 QLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVA 90 (433)
Q Consensus 15 ~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~ 90 (433)
.......+..+++.+..+++.+|||||||+|.++..++. ..+ .+|+|+|+|+.+++.|+++. + ..++++.++
T Consensus 54 ~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~-~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 129 (302)
T 3hem_A 54 EEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVA-EYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ 129 (302)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHH-HHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHH-hCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 345556778888888888999999999999999954443 322 48999999999999999987 2 237999999
Q ss_pred cccCCcccccccCcEeEEEEcccccchhhH---------HHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 91 NIADQNLESIFLAKFNKIFSFYCLHWVQDQ---------RQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 91 Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~---------~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
|+.+. +++||+|++..+++|++++ ..+++++.++|||||.+++.......
T Consensus 130 d~~~~------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 130 GWEEF------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp CGGGC------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred CHHHc------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 98764 2899999999999999554 79999999999999999998765443
No 48
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.61 E-value=4.2e-15 Score=136.64 Aligned_cols=111 Identities=25% Similarity=0.418 Sum_probs=91.9
Q ss_pred HHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCc
Q psy11646 25 YIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 25 l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
+++.+...++.+|||+|||+|.++..++. . + .+++|+|+|+.+++.|+++.. .++++.++|+...+.+ ++
T Consensus 37 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~-~---~-~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d~~~~~~~----~~ 106 (220)
T 3hnr_A 37 ILEDVVNKSFGNVLEFGVGTGNLTNKLLL-A---G-RTVYGIEPSREMRMIAKEKLP-KEFSITEGDFLSFEVP----TS 106 (220)
T ss_dssp HHHHHHHTCCSEEEEECCTTSHHHHHHHH-T---T-CEEEEECSCHHHHHHHHHHSC-TTCCEESCCSSSCCCC----SC
T ss_pred HHHHhhccCCCeEEEeCCCCCHHHHHHHh-C---C-CeEEEEeCCHHHHHHHHHhCC-CceEEEeCChhhcCCC----CC
Confidence 33333345788999999999999954443 2 2 599999999999999999874 5899999999886543 78
Q ss_pred EeEEEEcccccchhhHHH--HHHHHHHhccCCCEEEEEeccCC
Q psy11646 105 FNKIFSFYCLHWVQDQRQ--AISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~--~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
||+|++..+++|+++... +++++.++|||||.+++.++...
T Consensus 107 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 107 IDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred eEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 999999999999988776 99999999999999999875443
No 49
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.61 E-value=4.8e-15 Score=139.21 Aligned_cols=117 Identities=21% Similarity=0.298 Sum_probs=96.7
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcc
Q psy11646 19 AKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNL 97 (433)
Q Consensus 19 ~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l 97 (433)
...+..++..+...++.+|||||||+|.++..++.. . ..+++|+|+|+.+++.|+++. ...++++.++|+...++
T Consensus 79 ~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~ 154 (254)
T 1xtp_A 79 IEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTK-L---YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATL 154 (254)
T ss_dssp HHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHH-H---CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCC
T ss_pred HHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHh-h---cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCC
Confidence 344556677776678899999999999999544442 2 248999999999999999997 33679999999987655
Q ss_pred cccccCcEeEEEEcccccch--hhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 98 ESIFLAKFNKIFSFYCLHWV--QDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~--~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
+. ++||+|++..+++|+ ++...+++++.++|||||.+++...
T Consensus 155 ~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 155 PP---NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CS---SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC---CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 44 799999999999999 5688999999999999999999864
No 50
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.61 E-value=6.2e-15 Score=137.38 Aligned_cols=111 Identities=21% Similarity=0.374 Sum_probs=93.4
Q ss_pred HHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCc
Q psy11646 25 YIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 25 l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
+...+...++.+|||||||+|.++..++. . +..+++|+|+|+.+++.|+++....++++.++|+...+++. ++
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~---~~ 107 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHE-H---GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQ---DS 107 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHH-T---TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCT---TC
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHH-C---CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCC---CC
Confidence 44555556789999999999999954443 2 21389999999999999999885568999999998765443 78
Q ss_pred EeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 105 FNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
||+|++..+++|+++...+++++.++|+|||.+++..+
T Consensus 108 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 108 FDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 99999999999999999999999999999999998764
No 51
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.60 E-value=3e-15 Score=141.01 Aligned_cols=115 Identities=16% Similarity=0.321 Sum_probs=94.5
Q ss_pred HHHHHHHHhc-CCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccC
Q psy11646 20 KLLSQYIDQF-KWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIAD 94 (433)
Q Consensus 20 ~ll~~l~~~l-~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~ 94 (433)
.....++..+ ..+++.+|||||||+|..+. .+++..+ .+++|+|+|+.+++.|+++. + ..++++.++|+..
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~-~l~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 107 (257)
T 3f4k_A 32 EATRKAVSFINELTDDAKIADIGCGTGGQTL-FLADYVK---GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN 107 (257)
T ss_dssp HHHHHHHTTSCCCCTTCEEEEETCTTSHHHH-HHHHHCC---SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCCCCCHHHH-HHHHhCC---CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 4455556655 34678899999999999994 4444433 39999999999999999987 2 2459999999987
Q ss_pred CcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 95 QNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 95 ~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
.+++. ++||+|++..+++|+ ++..+++++.++|||||.+++..+
T Consensus 108 ~~~~~---~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 108 LPFQN---EELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp CSSCT---TCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCCC---CCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 66554 899999999999999 789999999999999999999864
No 52
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.60 E-value=6.2e-15 Score=141.43 Aligned_cols=121 Identities=20% Similarity=0.217 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEe
Q psy11646 15 QLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVA 90 (433)
Q Consensus 15 ~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~ 90 (433)
.......+..+++.+..+++.+|||||||+|.++..++... + .+|+|+|+|+.+++.|+++. ...++++.++
T Consensus 46 ~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~ 121 (287)
T 1kpg_A 46 QEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY---D-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA 121 (287)
T ss_dssp HHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH---C-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES
T ss_pred HHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc---C-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 34555677788888888889999999999999995554332 2 49999999999999999986 1257999999
Q ss_pred cccCCcccccccCcEeEEEEcccccch--hhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 91 NIADQNLESIFLAKFNKIFSFYCLHWV--QDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 91 Di~~~~l~~~~~~~fD~Vis~~~l~~~--~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
|+.+.+ ++||+|++..+++|+ ++...+++++.++|||||.+++..+...
T Consensus 122 d~~~~~------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 122 GWEQFD------EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp CGGGCC------CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred ChhhCC------CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 986532 689999999999999 6789999999999999999999876543
No 53
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.59 E-value=1.1e-14 Score=134.17 Aligned_cols=117 Identities=21% Similarity=0.410 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccC
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIAD 94 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~ 94 (433)
....++..+.+.+ +++.+|||+|||+|.++ ..++.. + .+++|+|+|+.+++.|+++. ...++++.++|+.+
T Consensus 24 ~~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~-~~l~~~---~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~ 96 (227)
T 1ve3_A 24 RIETLEPLLMKYM--KKRGKVLDLACGVGGFS-FLLEDY---G-FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK 96 (227)
T ss_dssp HHHHHHHHHHHSC--CSCCEEEEETCTTSHHH-HHHHHT---T-CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS
T ss_pred HHHHHHHHHHHhc--CCCCeEEEEeccCCHHH-HHHHHc---C-CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc
Confidence 3445555555544 35789999999999999 444433 2 38999999999999999987 33689999999987
Q ss_pred CcccccccCcEeEEEEccc--ccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 95 QNLESIFLAKFNKIFSFYC--LHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 95 ~~l~~~~~~~fD~Vis~~~--l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.+++. ++||+|+++.+ +++..+...+++++.++|+|||.+++..+.
T Consensus 97 ~~~~~---~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 97 LSFED---KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCSCT---TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCC---CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 65443 78999999999 677778899999999999999999988654
No 54
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.59 E-value=5.3e-15 Score=138.30 Aligned_cols=120 Identities=20% Similarity=0.320 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC---CCCeEEEEecc
Q psy11646 17 DAAKLLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT---NPKLEFVVANI 92 (433)
Q Consensus 17 ~~~~ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~---~~~i~~~~~Di 92 (433)
....++..++..+. .+++.+|||||||+|.++. .++... ..+++|+|+|+.+++.|+++.. ..++++.++|+
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~-~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~ 137 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAGIGRITK-RLLLPL---FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL 137 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCTTTHHHH-HTTTTT---CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHH-HHHHhc---CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh
Confidence 34455555555443 2368899999999999994 444322 2489999999999999999872 24688999998
Q ss_pred cCCcccccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEecc
Q psy11646 93 ADQNLESIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 93 ~~~~l~~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
...+.+. ++||+|++..+++|+++. ..+++++.++|+|||.+++.++.
T Consensus 138 ~~~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 138 QDFTPEP---DSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp GGCCCCS---SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhcCCCC---CCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 8765443 689999999999999874 48999999999999999997654
No 55
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.59 E-value=4.5e-15 Score=135.75 Aligned_cols=110 Identities=17% Similarity=0.391 Sum_probs=91.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES 99 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~ 99 (433)
..+..++..+ +++.+|||||||+|.++..++. . + .+++|+|+|+.+++.|+++. ++.+..+|+...+ .
T Consensus 32 ~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~-~---~-~~v~~vD~s~~~~~~a~~~~---~~~~~~~d~~~~~-~- 99 (211)
T 3e23_A 32 ATLTKFLGEL--PAGAKILELGCGAGYQAEAMLA-A---G-FDVDATDGSPELAAEASRRL---GRPVRTMLFHQLD-A- 99 (211)
T ss_dssp HHHHHHHTTS--CTTCEEEESSCTTSHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHH---TSCCEECCGGGCC-C-
T ss_pred HHHHHHHHhc--CCCCcEEEECCCCCHHHHHHHH-c---C-CeEEEECCCHHHHHHHHHhc---CCceEEeeeccCC-C-
Confidence 4455555554 4688999999999999954443 2 2 59999999999999999986 6788889988765 3
Q ss_pred cccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 100 IFLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.++||+|++..+++|+. +...+++++.++|||||.+++....
T Consensus 100 --~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 100 --IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp --CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 38999999999999997 7889999999999999999998643
No 56
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=1.3e-14 Score=135.14 Aligned_cols=113 Identities=22% Similarity=0.382 Sum_probs=91.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC----CCeEEEEecccCCc
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN----PKLEFVVANIADQN 96 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~----~~i~~~~~Di~~~~ 96 (433)
.+..++.....+ +.+|||||||+|.++. .++. .+ .+|+|+|+|+.+++.|+++... .++++.++|+.+.+
T Consensus 55 ~l~~~~~~~~~~-~~~vLDiGcG~G~~~~-~l~~---~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 128 (235)
T 3lcc_A 55 LIVHLVDTSSLP-LGRALVPGCGGGHDVV-AMAS---PE-RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR 128 (235)
T ss_dssp HHHHHHHTTCSC-CEEEEEETCTTCHHHH-HHCB---TT-EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC
T ss_pred HHHHHHHhcCCC-CCCEEEeCCCCCHHHH-HHHh---CC-CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC
Confidence 344555555444 4599999999999994 4443 23 6899999999999999998732 46999999998864
Q ss_pred ccccccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+. ++||+|+++.++++++ +...+++++.++|+|||.+++....
T Consensus 129 -~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 129 -PT---ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp -CS---SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -CC---CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 22 6899999999999997 8899999999999999999987644
No 57
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.59 E-value=5.5e-15 Score=134.22 Aligned_cols=112 Identities=21% Similarity=0.377 Sum_probs=92.7
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccc
Q psy11646 19 AKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLE 98 (433)
Q Consensus 19 ~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~ 98 (433)
..++..+... .+.+|||+|||+|.++..++. . + .+++|+|+|+.|++.|+++. .++++.++|+.+.+++
T Consensus 31 ~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~-~---~-~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~ 99 (203)
T 3h2b_A 31 RVLIEPWATG----VDGVILDVGSGTGRWTGHLAS-L---G-HQIEGLEPATRLVELARQTH--PSVTFHHGTITDLSDS 99 (203)
T ss_dssp HHHHHHHHHH----CCSCEEEETCTTCHHHHHHHH-T---T-CCEEEECCCHHHHHHHHHHC--TTSEEECCCGGGGGGS
T ss_pred HHHHHHHhcc----CCCeEEEecCCCCHHHHHHHh-c---C-CeEEEEeCCHHHHHHHHHhC--CCCeEEeCcccccccC
Confidence 3455555543 278999999999999954443 2 2 48999999999999999986 6899999999886544
Q ss_pred ccccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
. ++||+|++..+++|++ +...+++++.++|+|||.+++.....
T Consensus 100 ~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 100 P---KRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp C---CCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred C---CCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 3 8999999999999996 88999999999999999999987544
No 58
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.59 E-value=2.5e-15 Score=144.38 Aligned_cols=149 Identities=19% Similarity=0.171 Sum_probs=110.0
Q ss_pred hcCCCCCCEEEEECCCC------ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEE-EEecccCCccccc
Q psy11646 28 QFKWTDNESVLDVGCGP------GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEF-VVANIADQNLESI 100 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG~------G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~-~~~Di~~~~l~~~ 100 (433)
.+..+++.+|||+|||+ |. .++++..+.+ .+|+|+|+|+. . .++++ +++|+.+.+++
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs---~~~a~~~~~~-~~V~gvDis~~--------v--~~v~~~i~gD~~~~~~~-- 121 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT---AVLRQWLPTG-TLLVDSDLNDF--------V--SDADSTLIGDCATVHTA-- 121 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH---HHHHHHSCTT-CEEEEEESSCC--------B--CSSSEEEESCGGGCCCS--
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH---HHHHHHcCCC-CEEEEEECCCC--------C--CCCEEEEECccccCCcc--
Confidence 34567899999999955 65 2344444433 49999999997 1 46888 99999875433
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeeccccCceEE
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLLFTGVIQV 180 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~pl~gv~~i 180 (433)
++||+|+++...++.
T Consensus 122 --~~fD~Vvsn~~~~~~--------------------------------------------------------------- 136 (290)
T 2xyq_A 122 --NKWDLIISDMYDPRT--------------------------------------------------------------- 136 (290)
T ss_dssp --SCEEEEEECCCCCC----------------------------------------------------------------
T ss_pred --CcccEEEEcCCcccc---------------------------------------------------------------
Confidence 679999986321110
Q ss_pred EccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCHHHHHH
Q psy11646 181 QGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNVVCLET 260 (433)
Q Consensus 181 qgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~~~~~~ 260 (433)
|.+..|+..+.++...++..+.++|+|||.|++++|++.....+..
T Consensus 137 ----------------------------------g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~ 182 (290)
T 2xyq_A 137 ----------------------------------KHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYK 182 (290)
T ss_dssp ------------------------------------CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHH
T ss_pred ----------------------------------ccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHH
Confidence 0000011111234456788999999999999999999999889999
Q ss_pred HHhcc-cceeEEecCCCCcccccceeEEEeeccCC
Q psy11646 261 KFQIF-FENVSIAKPKSSRNSSIESFIVCQNYRPP 294 (433)
Q Consensus 261 ~l~~~-F~~v~~~KP~~sr~~s~E~~~v~~~~~~~ 294 (433)
.++.+ |..|.+. +||.+|.|.|++|++|+++
T Consensus 183 ~l~~~GF~~v~~~---asr~~s~e~~lv~~~~~~~ 214 (290)
T 2xyq_A 183 LMGHFSWWTAFVT---NVNASSSEAFLIGANYLGK 214 (290)
T ss_dssp HHTTEEEEEEEEE---GGGTTSSCEEEEEEEECSS
T ss_pred HHHHcCCcEEEEE---EcCCCchheEEecCCccCC
Confidence 99988 9988888 8999999999999999976
No 59
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.58 E-value=4e-14 Score=130.41 Aligned_cols=124 Identities=17% Similarity=0.260 Sum_probs=96.4
Q ss_pred hhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCC
Q psy11646 4 ATLYETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNP 83 (433)
Q Consensus 4 a~~Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~ 83 (433)
++.|+.............+..+.... ++.+|||||||+|.++. .++. . +|+|+|+.+++.|+++
T Consensus 21 ~~~y~~~~~~~~~~~~~~~~~l~~~~---~~~~vLDiG~G~G~~~~-~l~~-------~-~~vD~s~~~~~~a~~~---- 84 (219)
T 1vlm_A 21 VNEYERWFLVHRFAYLSELQAVKCLL---PEGRGVEIGVGTGRFAV-PLKI-------K-IGVEPSERMAEIARKR---- 84 (219)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHC---CSSCEEEETCTTSTTHH-HHTC-------C-EEEESCHHHHHHHHHT----
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHhC---CCCcEEEeCCCCCHHHH-HHHH-------H-hccCCCHHHHHHHHhc----
Confidence 45566554433333444444444433 37899999999999984 4431 2 9999999999999986
Q ss_pred CeEEEEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 84 KLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 84 ~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
++++.++|+...+++. ++||+|++..+++|++++..+++++.++|+|||.+++..+....
T Consensus 85 ~~~~~~~d~~~~~~~~---~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 144 (219)
T 1vlm_A 85 GVFVLKGTAENLPLKD---ESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRES 144 (219)
T ss_dssp TCEEEECBTTBCCSCT---TCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSS
T ss_pred CCEEEEcccccCCCCC---CCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCcc
Confidence 6899999998765443 78999999999999999999999999999999999998765543
No 60
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.58 E-value=4.2e-15 Score=143.33 Aligned_cols=113 Identities=18% Similarity=0.251 Sum_probs=81.6
Q ss_pred CCCCEEEEECCCCChhHHHHhc---ccCCCCCcEEEEEeCCHHHHHHHHhhc-C---CCCeEEE--EecccCCcc---cc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLL---PNLPKSVVKLVGLDVSPNMIKHAKNHH-T---NPKLEFV--VANIADQNL---ES 99 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~---~~~~~~~~~v~gvDiS~~~l~~A~~~~-~---~~~i~~~--~~Di~~~~l---~~ 99 (433)
.++.+|||||||+|..+..++. ...+.....++|+|+|+.|++.|+++. . ..++.+. .+++++.+. ..
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 4678999999999987643332 222322013499999999999999886 2 2355544 444432210 00
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+.+++||+|+++.++||++|+..++++++++|||||.+++.....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 124789999999999999999999999999999999999986543
No 61
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.58 E-value=2.9e-15 Score=142.40 Aligned_cols=109 Identities=16% Similarity=0.265 Sum_probs=83.0
Q ss_pred CCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CC--------------------------
Q psy11646 30 KWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TN-------------------------- 82 (433)
Q Consensus 30 ~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~-------------------------- 82 (433)
...++.+|||||||+|.++ .+++. .+..+|+|+|+|+.|++.|++++ ..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~-~~~~~---~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~ 127 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQ-VLAAC---DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEK 127 (263)
T ss_dssp TSCCEEEEEESSCTTCCGG-GTTGG---GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHH
T ss_pred CCCCCceEEEeCCCccHHH-HHHHH---hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhH
Confidence 3457889999999999887 33332 23247999999999999998865 11
Q ss_pred -----CCeE-EEEecccCC-cccccccCcEeEEEEcccccch----hhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 83 -----PKLE-FVVANIADQ-NLESIFLAKFNKIFSFYCLHWV----QDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 83 -----~~i~-~~~~Di~~~-~l~~~~~~~fD~Vis~~~l~~~----~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
.++. +.++|+.+. ++++...++||+|+++.++||+ ++...++++++++|||||.+++...
T Consensus 128 ~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 128 EEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 0133 889999873 3322234789999999999986 5678899999999999999999753
No 62
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.58 E-value=6.5e-15 Score=134.18 Aligned_cols=106 Identities=23% Similarity=0.369 Sum_probs=89.0
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccccccCcEeEEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLESIFLAKFNKIF 109 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~~~~~~fD~Vi 109 (433)
.++.+|||+|||+|..+..+++. .+ .+++|+|+|+.|++.|+++. ...++++.++|+...++++ ++||+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~---~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~---~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE---DG-YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKD---ESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH---TT-CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCT---TCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHh---CC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCC---CceeEEE
Confidence 56889999999999985355543 22 59999999999999999886 2357899999998866544 7899999
Q ss_pred Ecccccch--hhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 110 SFYCLHWV--QDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 110 s~~~l~~~--~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+..+++|+ ++...+++++.++|+|||.+++.....
T Consensus 95 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 99999999 788999999999999999999987654
No 63
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.58 E-value=8e-15 Score=129.32 Aligned_cols=106 Identities=19% Similarity=0.271 Sum_probs=87.8
Q ss_pred HHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcE
Q psy11646 26 IDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 26 ~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
++.+...++.+|||+|||+|.++..++. . . .+++|+|+|+.+++.|+++. .++++..+| .+++. ++|
T Consensus 10 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~-~---~-~~v~~vD~s~~~~~~a~~~~--~~v~~~~~d---~~~~~---~~~ 76 (170)
T 3i9f_A 10 LPNIFEGKKGVIVDYGCGNGFYCKYLLE-F---A-TKLYCIDINVIALKEVKEKF--DSVITLSDP---KEIPD---NSV 76 (170)
T ss_dssp HHHHHSSCCEEEEEETCTTCTTHHHHHT-T---E-EEEEEECSCHHHHHHHHHHC--TTSEEESSG---GGSCT---TCE
T ss_pred HHhcCcCCCCeEEEECCCCCHHHHHHHh-h---c-CeEEEEeCCHHHHHHHHHhC--CCcEEEeCC---CCCCC---Cce
Confidence 3334456788999999999999944443 2 2 38999999999999999984 689999888 33333 789
Q ss_pred eEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 106 NKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 106 D~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
|+|++..+++|++++..+++++.++|||||.+++.....
T Consensus 77 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 77 DFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp EEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred EEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 999999999999999999999999999999999986543
No 64
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.58 E-value=1.9e-14 Score=129.79 Aligned_cols=109 Identities=20% Similarity=0.301 Sum_probs=89.7
Q ss_pred HHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccc
Q psy11646 25 YIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIF 101 (433)
Q Consensus 25 l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~ 101 (433)
+++.+...++.+|||+|||+|..+..++. . + .+++|+|+|+.+++.|+++. ...++++.++|+.+.++
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~---~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---- 94 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAA-N---G-YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF---- 94 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC----
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHH-C---C-CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC----
Confidence 33444556788999999999999954443 2 2 59999999999999999876 33479999999987654
Q ss_pred cCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEEec
Q psy11646 102 LAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
.++||+|++..+++|++ +...+++++.++|+|||.+++...
T Consensus 95 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 38899999999999987 788999999999999999887653
No 65
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.57 E-value=2.3e-14 Score=139.58 Aligned_cols=122 Identities=15% Similarity=0.280 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-C---CCCeEEEEe
Q psy11646 15 QLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-T---NPKLEFVVA 90 (433)
Q Consensus 15 ~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~---~~~i~~~~~ 90 (433)
.......+..+++.+...++.+|||||||+|.++..++. .. + .+|+|+|+|+.+++.|+++. . ..++++.++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~-~~--~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 147 (318)
T 2fk8_A 72 EEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVE-RF--D-VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ 147 (318)
T ss_dssp HHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHH-HH--C-CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES
T ss_pred HHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHH-HC--C-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 344566777888888888899999999999999955444 32 2 49999999999999999987 1 246999999
Q ss_pred cccCCcccccccCcEeEEEEcccccch--hhHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 91 NIADQNLESIFLAKFNKIFSFYCLHWV--QDQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 91 Di~~~~l~~~~~~~fD~Vis~~~l~~~--~d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
|+.+.+ ++||+|++..+++|+ ++...+++++.++|||||.+++..+....
T Consensus 148 d~~~~~------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 148 GWEDFA------EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp CGGGCC------CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred ChHHCC------CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 987642 689999999999999 68899999999999999999998766543
No 66
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.57 E-value=1.6e-15 Score=145.92 Aligned_cols=115 Identities=22% Similarity=0.331 Sum_probs=89.6
Q ss_pred HHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-------CCCCeEEEEecccCCccc
Q psy11646 26 IDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-------TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 26 ~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-------~~~~i~~~~~Di~~~~l~ 98 (433)
...+...++.+|||||||+|.++..++. . + .+|+|+|+|+.|++.|+++. ...++.+..+|+...+..
T Consensus 50 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~---~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (293)
T 3thr_A 50 LGLLRQHGCHRVLDVACGTGVDSIMLVE-E---G-FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD 124 (293)
T ss_dssp HHHHHHTTCCEEEETTCTTSHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred HHHhcccCCCEEEEecCCCCHHHHHHHH-C---C-CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccc
Confidence 3333335788999999999999955544 2 3 49999999999999998764 124678888888765400
Q ss_pred ccccCcEeEEEEc-ccccchhh-------HHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 99 SIFLAKFNKIFSF-YCLHWVQD-------QRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 99 ~~~~~~fD~Vis~-~~l~~~~d-------~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
-...++||+|++. .+++|+.+ ...++++++++|||||.+++..+...
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYD 179 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred cccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHH
Confidence 0123899999998 89999988 89999999999999999999876543
No 67
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.57 E-value=3.3e-14 Score=136.57 Aligned_cols=110 Identities=24% Similarity=0.358 Sum_probs=89.7
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CC---CCeEEEEecccCCcccccccCcEe
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TN---PKLEFVVANIADQNLESIFLAKFN 106 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~---~~i~~~~~Di~~~~l~~~~~~~fD 106 (433)
..++.+|||||||+|.++.. ++.. +..+++|+|+|+.+++.|+++. .. .++++.++|+...++. ..++||
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~-l~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD 135 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLK-YERA---GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD--LGKEFD 135 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHH-HHHH---TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC--CSSCEE
T ss_pred CCCCCeEEEECCCCCHHHHH-HHHC---CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC--CCCCcC
Confidence 36788999999999999855 4433 2248999999999999999987 21 4689999999886552 237899
Q ss_pred EEEEcccccc----hhhHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 107 KIFSFYCLHW----VQDQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 107 ~Vis~~~l~~----~~d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
+|++..++|| .++...+++++.++|+|||.+++..+....
T Consensus 136 ~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 179 (298)
T 1ri5_A 136 VISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDV 179 (298)
T ss_dssp EEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH
T ss_pred EEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHH
Confidence 9999999987 567889999999999999999998766543
No 68
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.57 E-value=2e-14 Score=139.83 Aligned_cols=117 Identities=15% Similarity=0.287 Sum_probs=96.5
Q ss_pred HHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCC
Q psy11646 21 LLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQ 95 (433)
Q Consensus 21 ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~ 95 (433)
....+++.+. ..++.+|||||||+|.++..++. .. + .+|+|+|+|+.+++.|+++. + ..++++.++|+.+.
T Consensus 104 ~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~-~~--~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 179 (312)
T 3vc1_A 104 QAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHR-RF--G-SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT 179 (312)
T ss_dssp HHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHH-HH--C-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHH-Hc--C-CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC
Confidence 3345667776 67899999999999999954444 32 2 58999999999999999986 2 24799999999886
Q ss_pred cccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 96 NLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
+++. ++||+|++..+++|+ ++..+++++.++|||||.+++......
T Consensus 180 ~~~~---~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 180 PFDK---GAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp CCCT---TCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CCCC---CCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 6544 899999999999999 599999999999999999999875443
No 69
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.57 E-value=1.1e-14 Score=146.03 Aligned_cols=109 Identities=19% Similarity=0.282 Sum_probs=90.6
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-----------CCCCeEEEEecccCC----
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-----------TNPKLEFVVANIADQ---- 95 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-----------~~~~i~~~~~Di~~~---- 95 (433)
..++.+|||||||+|.++. .++.....+ .+|+|+|+|+.|++.|+++. ...++++.++|+.+.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~-~la~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVY-LASKLVGEH-GKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHH-HHHHHHTTT-CEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHH-HHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence 3578899999999999994 444443222 49999999999999999874 126899999999875
Q ss_pred --cccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 96 --NLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 96 --~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+++ +++||+|+++.+++|++++..++++++++|||||++++.+...
T Consensus 159 ~~~~~---~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 159 PEGVP---DSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp SCCCC---TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cCCCC---CCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 343 3899999999999999999999999999999999999976543
No 70
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.57 E-value=2.2e-14 Score=134.57 Aligned_cols=85 Identities=22% Similarity=0.255 Sum_probs=79.3
Q ss_pred CCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCC-CeEEEEEeec--CCHHHHHHHHhcccceeEEecCCC
Q psy11646 200 EKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPG-GTFVGKIFRS--RNVVCLETKFQIFFENVSIAKPKS 276 (433)
Q Consensus 200 ~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~g-G~fv~Kif~g--~~~~~~~~~l~~~F~~v~~~KP~~ 276 (433)
.++|+++||++ ..+|....|+.++.. +|+++..+|++| |.|++|+|.+ .++..+...++..|..+.+.||.
T Consensus 159 ~~~D~ivcDig-eSs~~~~ve~~Rtl~----vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~lq~~fgg~lvr~P~- 232 (321)
T 3lkz_A 159 ECCDTLLCDIG-ESSSSAEVEEHRTIR----VLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELLQRRYGGGLVRNPL- 232 (321)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHH----HHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCTT-
T ss_pred CCCCEEEEECc-cCCCChhhhhhHHHH----HHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHHHHHhCCEeEeCCC-
Confidence 46899999999 999999999999877 999999999999 9999999999 88889999999999999999999
Q ss_pred CcccccceeEEEee
Q psy11646 277 SRNSSIESFIVCQN 290 (433)
Q Consensus 277 sr~~s~E~~~v~~~ 290 (433)
||++|.|.|+|.-.
T Consensus 233 SRnst~EmY~vsGa 246 (321)
T 3lkz_A 233 SRNSTHEMYWVSRA 246 (321)
T ss_dssp SCTTCCCEEEETTC
T ss_pred CCCCcceEEEEecC
Confidence 99999999999543
No 71
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.57 E-value=1.5e-14 Score=136.66 Aligned_cols=103 Identities=18% Similarity=0.215 Sum_probs=84.1
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC--------------------CCCeEEEEec
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT--------------------NPKLEFVVAN 91 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~--------------------~~~i~~~~~D 91 (433)
.++.+|||+|||+|..+ ..|++ .+ .+|+|+|+|+.|++.|+++.. ..++++.++|
T Consensus 67 ~~~~~vLD~GCG~G~~~-~~La~---~G-~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEM-KWFAD---RG-HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp CCSCEEEETTCTTCTHH-HHHHH---TT-CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred CCCCeEEEeCCCCcHHH-HHHHH---CC-CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 47889999999999999 45553 23 599999999999999987652 2579999999
Q ss_pred ccCCcccccccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEEe
Q psy11646 92 IADQNLESIFLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 92 i~~~~l~~~~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+.+.+.. ..++||+|++..++++++ +...+++++.++|||||++++..
T Consensus 142 ~~~l~~~--~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 142 IFDLPRA--NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp TTTGGGG--CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCcc--cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9875432 126899999999998885 45678999999999999997654
No 72
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.56 E-value=2.7e-14 Score=133.04 Aligned_cols=130 Identities=22% Similarity=0.353 Sum_probs=97.1
Q ss_pred hhhhhhhhh--hcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-
Q psy11646 4 ATLYETNNS--MQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH- 80 (433)
Q Consensus 4 a~~Y~~~~~--~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~- 80 (433)
+..|+.... .......+.+..++... ..++.+|||+|||+|.++..+ ++. + .+++|+|+|+.|++.|+++.
T Consensus 7 a~~yd~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l-~~~---~-~~~~~~D~s~~~~~~a~~~~~ 80 (246)
T 1y8c_A 7 AHIYDKLIRADVDYKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENL-CPK---F-KNTWAVDLSQEMLSEAENKFR 80 (246)
T ss_dssp HHHHHHHTTCSCCHHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHH-GGG---S-SEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHccccccHHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHH-HHC---C-CcEEEEECCHHHHHHHHHHHh
Confidence 455655433 12223333344444332 136789999999999999444 432 2 58999999999999999987
Q ss_pred -CCCCeEEEEecccCCcccccccCcEeEEEEcc-cccch---hhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 81 -TNPKLEFVVANIADQNLESIFLAKFNKIFSFY-CLHWV---QDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 81 -~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~-~l~~~---~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
...++++.++|+...+++ ++||+|++.. +++|+ ++...++++++++|+|||.+++....
T Consensus 81 ~~~~~~~~~~~d~~~~~~~----~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 81 SQGLKPRLACQDISNLNIN----RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp HTTCCCEEECCCGGGCCCS----CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hcCCCeEEEecccccCCcc----CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 223799999999876543 7899999998 99999 67889999999999999999986654
No 73
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.56 E-value=1.7e-14 Score=129.86 Aligned_cols=108 Identities=8% Similarity=0.004 Sum_probs=87.6
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNKI 108 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~V 108 (433)
.++.+|||+|||+|.++..+++ .+..+|+|+|+|+.|++.|++++ ...++++.++|+.+.. .....++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALS----RGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV-AAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH----TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH-HHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHH----CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH-hhccCCCccEE
Confidence 4688999999999999954554 22248999999999999999987 3368999999987642 11224789999
Q ss_pred EEcccccch-hhHHHHHHHHHH--hccCCCEEEEEeccC
Q psy11646 109 FSFYCLHWV-QDQRQAISNIYN--LLMPGGEVLLLLNAF 144 (433)
Q Consensus 109 is~~~l~~~-~d~~~~l~~i~~--~LkpGG~lll~~~~~ 144 (433)
+++.++++. ++...++..+.+ +|+|||.+++.....
T Consensus 118 ~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 118 LADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred EECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 999998885 678899999999 999999999976543
No 74
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.55 E-value=8.5e-15 Score=141.34 Aligned_cols=106 Identities=25% Similarity=0.474 Sum_probs=85.7
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC------------------------------
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN------------------------------ 82 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~------------------------------ 82 (433)
++.+|||||||+|.++ ..++..++. .+|+|+|+|+.|++.|+++...
T Consensus 46 ~~~~VLDiGCG~G~~~-~~la~~~~~--~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLT-LSIACKWGP--SRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp TTSEEEEESCTTCHHH-HHHHHHTCC--SEEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred CCCcEEEeCCCCCHHH-HHHHHHcCC--CEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccc
Confidence 6889999999999999 455555443 4999999999999999998611
Q ss_pred -------------------------------CCeEEEEecccCCc--ccccccCcEeEEEEcccccchh------hHHHH
Q psy11646 83 -------------------------------PKLEFVVANIADQN--LESIFLAKFNKIFSFYCLHWVQ------DQRQA 123 (433)
Q Consensus 83 -------------------------------~~i~~~~~Di~~~~--l~~~~~~~fD~Vis~~~l~~~~------d~~~~ 123 (433)
.+++|.++|+.... +.....++||+|++..+++|+. +...+
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 47999999987653 1112348999999999998774 67889
Q ss_pred HHHHHHhccCCCEEEEEe
Q psy11646 124 ISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 124 l~~i~~~LkpGG~lll~~ 141 (433)
+++++++|+|||.+++..
T Consensus 203 l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHhCCCcEEEEec
Confidence 999999999999998853
No 75
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.55 E-value=6.8e-14 Score=127.35 Aligned_cols=124 Identities=14% Similarity=0.192 Sum_probs=96.2
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccc
Q psy11646 23 SQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLES 99 (433)
Q Consensus 23 ~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~ 99 (433)
..++..+...++.+|||+|||+|.++ ..++...+. .+++|+|+|+.+++.|+++. +..++++.++|+.+.....
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~-~~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 106 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVS-IEASNLMPN--GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL 106 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHH-HHHHHHCTT--SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHH-HHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC
Confidence 44566667788999999999999999 455555544 49999999999999999987 3468999999986542221
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhh
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLS 155 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~ 155 (433)
++||+|++..+++ +...+++++.++|+|||.+++..............+.
T Consensus 107 ---~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~ 156 (204)
T 3e05_A 107 ---PDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLE 156 (204)
T ss_dssp ---CCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHH
T ss_pred ---CCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHH
Confidence 6799999998876 6788999999999999999998765544444444443
No 76
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.55 E-value=1.8e-14 Score=139.82 Aligned_cols=110 Identities=18% Similarity=0.226 Sum_probs=89.5
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC----CCCeEEEEecccCCcccccccCcEe
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT----NPKLEFVVANIADQNLESIFLAKFN 106 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~----~~~i~~~~~Di~~~~l~~~~~~~fD 106 (433)
.+++.+|||||||+|..+..++....+. .+++|+|+|+.+++.|+++.. ..++++.++|+.+.+++ ++||
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD 189 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPG--VQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR----EGYD 189 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTT--CEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC----SCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCC--CeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc----CCeE
Confidence 4678999999999999984332233333 499999999999999999872 23499999999886543 7999
Q ss_pred EEEEcccccchhhHHH---HHHHHHHhccCCCEEEEEeccCCc
Q psy11646 107 KIFSFYCLHWVQDQRQ---AISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 107 ~Vis~~~l~~~~d~~~---~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
+|+++.+++|+++... +++++.++|||||.+++......+
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 232 (305)
T 3ocj_A 190 LLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPP 232 (305)
T ss_dssp EEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCT
T ss_pred EEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCC
Confidence 9999999999977665 799999999999999998765443
No 77
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.55 E-value=2.6e-14 Score=132.83 Aligned_cols=112 Identities=11% Similarity=0.205 Sum_probs=89.3
Q ss_pred HHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcccccccCc
Q psy11646 26 IDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 26 ~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
++.+.++||.+|||+|||+|.++..+.....+.+ +|+|+|+|+.|++.++++. ...++..+.+|...........+.
T Consensus 70 l~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G--~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 70 LIELPVKEGDRILYLGIASGTTASHMSDIIGPRG--RIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp CSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTC--EEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCC
T ss_pred hhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCc--eEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccce
Confidence 3456688999999999999999944444334555 9999999999999999988 557899999998764333345588
Q ss_pred EeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+|+|++.. .+..+...++.++++.|||||+++++.
T Consensus 148 vDvVf~d~--~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 148 VDGLYADV--AQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEEECC--CCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEEec--cCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 99998754 344577889999999999999999875
No 78
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.54 E-value=7.8e-15 Score=148.54 Aligned_cols=119 Identities=15% Similarity=0.220 Sum_probs=93.4
Q ss_pred hcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEE----
Q psy11646 13 MQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFV---- 88 (433)
Q Consensus 13 ~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~---- 88 (433)
........+...+++.+...++.+|||||||+|.++..+ ++ .+ .+++|+|+|+.|++.|+++. +...
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l-~~---~g-~~v~gvD~s~~~~~~a~~~~----~~~~~~~~ 157 (416)
T 4e2x_A 87 VMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTI-QE---AG-VRHLGFEPSSGVAAKAREKG----IRVRTDFF 157 (416)
T ss_dssp HHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHH-HH---TT-CEEEEECCCHHHHHHHHTTT----CCEECSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHH-HH---cC-CcEEEECCCHHHHHHHHHcC----CCcceeee
Confidence 344556777788888888788999999999999999444 43 23 59999999999999999872 2222
Q ss_pred -EecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 89 -VANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 89 -~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
..+.+..++ .+++||+|++++++||++++..++++++++|||||.+++..+.
T Consensus 158 ~~~~~~~l~~---~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 158 EKATADDVRR---TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp SHHHHHHHHH---HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chhhHhhccc---CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 222222222 2389999999999999999999999999999999999997654
No 79
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.54 E-value=4.4e-14 Score=130.09 Aligned_cols=163 Identities=18% Similarity=0.261 Sum_probs=112.2
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIF 101 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~ 101 (433)
...+++.+. .++.+|||+|||+|.++.. ++.. + .+++|+|+|+.+++.|+++. .++.++|+.....+ ..
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G~~~~~-l~~~---~-~~~~~~D~~~~~~~~~~~~~----~~~~~~d~~~~~~~-~~ 90 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSGALGAA-IKEN---G-TRVSGIEAFPEAAEQAKEKL----DHVVLGDIETMDMP-YE 90 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTSHHHHH-HHTT---T-CEEEEEESSHHHHHHHHTTS----SEEEESCTTTCCCC-SC
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCCHHHHH-HHhc---C-CeEEEEeCCHHHHHHHHHhC----CcEEEcchhhcCCC-CC
Confidence 344555554 6788999999999999944 4433 2 59999999999999999874 37888998763211 22
Q ss_pred cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeeccccCceEEE
Q psy11646 102 LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLLFTGVIQVQ 181 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~pl~gv~~iq 181 (433)
+++||+|++..+++|++++..+++++.++|+|||.+++..+............ .+.|....... . .
T Consensus 91 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~------~ 156 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLL--AGNWTYTEYGL------L------D 156 (230)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHH--TTCCCCBSSST------T------B
T ss_pred CCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHh--cCCceeccCCC------C------C
Confidence 37899999999999999999999999999999999999876654432222211 13343211000 0 0
Q ss_pred ccccccchHHHHHHhcCCCCCeEEEecC
Q psy11646 182 GDITKESTIKEIFSHFDDEKVDLVVFDG 209 (433)
Q Consensus 182 gDi~~~~t~~~il~~~~~~~~dlVvsD~ 209 (433)
.......+..++...+...++.++-...
T Consensus 157 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 157 KTHIRFFTFNEMLRMFLKAGYSISKVDR 184 (230)
T ss_dssp TTCCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cceEEEecHHHHHHHHHHcCCeEEEEEe
Confidence 0111234667777777777887765544
No 80
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.54 E-value=3.1e-14 Score=134.88 Aligned_cols=113 Identities=14% Similarity=0.145 Sum_probs=86.1
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc--c
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL--E 98 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l--~ 98 (433)
.+..++..+...++.+|||||||+|.++..++. .+ .+|+|+|+|+.|++.|+++.... +...++.+... .
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~----~g-~~V~gvD~S~~ml~~Ar~~~~~~---~v~~~~~~~~~~~~ 104 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALE----RG-ASVTVFDFSQRMCDDLAEALADR---CVTIDLLDITAEIP 104 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHH----TT-CEEEEEESCHHHHHHHHHHTSSS---CCEEEECCTTSCCC
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHh----cC-CEEEEEECCHHHHHHHHHHHHhc---cceeeeeecccccc
Confidence 445666777778899999999999999954443 23 59999999999999999997322 23344443322 1
Q ss_pred ccccCcEeEEEEcccccch--hhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 99 SIFLAKFNKIFSFYCLHWV--QDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~--~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
....++||+|+++.++||+ ++...+++++.++| |||.++++..
T Consensus 105 ~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 105 KELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp GGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 1224789999999999986 35678999999999 9999998764
No 81
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.54 E-value=4.9e-14 Score=130.93 Aligned_cols=127 Identities=23% Similarity=0.374 Sum_probs=94.9
Q ss_pred hhhhhhhhh----hcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhh
Q psy11646 4 ATLYETNNS----MQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNH 79 (433)
Q Consensus 4 a~~Y~~~~~----~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~ 79 (433)
++.|+.... ..+.....+...+...+ .++.+|||+|||+|.++..++. .. .+++|+|+|+.|++.|+++
T Consensus 9 a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~-~~----~~v~~~D~s~~~~~~a~~~ 81 (239)
T 3bxo_A 9 ADVYDLFYLGRGKDYAAEASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTK-EF----GDTAGLELSEDMLTHARKR 81 (239)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHH-HH----SEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhccHhhHHHHHHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHH-hC----CcEEEEeCCHHHHHHHHHh
Confidence 566666432 22223333444333333 5678999999999999954443 32 3899999999999999998
Q ss_pred cCCCCeEEEEecccCCcccccccCcEeEEEE-cccccch---hhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 80 HTNPKLEFVVANIADQNLESIFLAKFNKIFS-FYCLHWV---QDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 80 ~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis-~~~l~~~---~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
. .++++.++|+.+.+. .++||+|++ ..+++|+ ++...++++++++|+|||.+++....
T Consensus 82 ~--~~~~~~~~d~~~~~~----~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 82 L--PDATLHQGDMRDFRL----GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp C--TTCEEEECCTTTCCC----SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred C--CCCEEEECCHHHccc----CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 6 579999999987654 378999995 5589988 56788999999999999999987543
No 82
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=1.2e-14 Score=135.95 Aligned_cols=115 Identities=12% Similarity=0.095 Sum_probs=87.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNL 97 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l 97 (433)
.+...+.+.+ ..+|.+|||||||+|..+ ..+++..+ .+++|+|+|+.+++.|+++. ...++.+..+|+... .
T Consensus 48 ~~m~~~a~~~-~~~G~rVLdiG~G~G~~~-~~~~~~~~---~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~-~ 121 (236)
T 3orh_A 48 PYMHALAAAA-SSKGGRVLEVGFGMAIAA-SKVQEAPI---DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV-A 121 (236)
T ss_dssp HHHHHHHHHH-TTTCEEEEEECCTTSHHH-HHHTTSCE---EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH-G
T ss_pred HHHHHHHHhh-ccCCCeEEEECCCccHHH-HHHHHhCC---cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh-c
Confidence 3333444333 257899999999999998 55554332 48999999999999999988 345678888887653 2
Q ss_pred cccccCcEeEEEE-----cccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 98 ESIFLAKFNKIFS-----FYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 98 ~~~~~~~fD~Vis-----~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
....+++||.|+. ...++|..+...++++++|+|||||++++.
T Consensus 122 ~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 122 PTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 2234488999974 556678889999999999999999998763
No 83
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.54 E-value=7.5e-14 Score=132.11 Aligned_cols=129 Identities=22% Similarity=0.366 Sum_probs=94.1
Q ss_pred hhhhhhhhhhcHH-HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC
Q psy11646 4 ATLYETNNSMQQL-DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN 82 (433)
Q Consensus 4 a~~Y~~~~~~~~~-~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~ 82 (433)
+..|++.....+. .....+..++..+. .++.+|||||||+|.++.. +++. + .+++|+|+|+.|++.|+++..
T Consensus 25 a~~Yd~~~~~~~~~~~~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~-l~~~---~-~~v~gvD~s~~~l~~a~~~~~- 97 (260)
T 2avn_A 25 ARAYDSMYETPKWKLYHRLIGSFLEEYL-KNPCRVLDLGGGTGKWSLF-LQER---G-FEVVLVDPSKEMLEVAREKGV- 97 (260)
T ss_dssp HHHHGGGGCSHHHHHHHHHHHHHHHHHC-CSCCEEEEETCTTCHHHHH-HHTT---T-CEEEEEESCHHHHHHHHHHTC-
T ss_pred HHHHHHhccccchhHHHHHHHHHHHHhc-CCCCeEEEeCCCcCHHHHH-HHHc---C-CeEEEEeCCHHHHHHHHhhcC-
Confidence 4556655432221 12223333443332 2788999999999999944 4432 2 599999999999999999863
Q ss_pred CCeEEEEecccCCcccccccCcEeEEEEcccccch-hhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 83 PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWV-QDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 83 ~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~-~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
. .+.++|+...++++ ++||+|++..+++|. +++..+++++.++|||||.+++..++.
T Consensus 98 -~-~~~~~d~~~~~~~~---~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 98 -K-NVVEAKAEDLPFPS---GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp -S-CEEECCTTSCCSCT---TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred -C-CEEECcHHHCCCCC---CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 2 28889998766543 889999998866555 789999999999999999999987543
No 84
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.54 E-value=2.9e-14 Score=138.30 Aligned_cols=109 Identities=21% Similarity=0.398 Sum_probs=83.8
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC--CC-------CeEEEEecccCCcc----cc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT--NP-------KLEFVVANIADQNL----ES 99 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~--~~-------~i~~~~~Di~~~~l----~~ 99 (433)
++.+|||||||+|..+..+++ .++.+|+|+|+|+.|++.|++++. .. +++|.+.|+..... +.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~----~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~ 123 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFY----GEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE 123 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHH----TTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred CCCeEEEEecCCcHhHHHHHh----cCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc
Confidence 478999999999986645554 223589999999999999999871 11 26788888844321 11
Q ss_pred -cccCcEeEEEEcccccch---hhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 100 -IFLAKFNKIFSFYCLHWV---QDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 100 -~~~~~fD~Vis~~~l~~~---~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
...++||+|+|..++|++ ++...++++++++|||||.+++.++...
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~ 173 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGD 173 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 234799999999999875 4568899999999999999998876543
No 85
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=2.5e-14 Score=133.84 Aligned_cols=109 Identities=17% Similarity=0.243 Sum_probs=89.8
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccc--cCcEeEEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIF--LAKFNKIF 109 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~--~~~fD~Vi 109 (433)
.++.+|||||||+|.++. .+++.. .+|+|+|+|+.|++.|+++....++++.++|+.+.+..... ...||+|+
T Consensus 55 ~~~~~vLD~GcG~G~~~~-~la~~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTK-FLSQFF----PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp CTTSCEEEETCTTSHHHH-HHHHHS----SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred CCCCeEEEEcCCCCHHHH-HHHHhC----CCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEE
Confidence 578899999999999994 444432 38999999999999999998556899999999875443211 13499999
Q ss_pred Ecccccchh--hHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 110 SFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 110 s~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
+..++||++ +...+++++.++|||||.+++......
T Consensus 130 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 130 MRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp EESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred EcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 999999998 789999999999999999888876543
No 86
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.53 E-value=1.3e-14 Score=135.36 Aligned_cols=114 Identities=16% Similarity=0.182 Sum_probs=85.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCC--
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQ-- 95 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~-- 95 (433)
.++..+...+ ..++.+|||||||+|..+. .++.. +..+++|+|+|+.|++.|+++. ...++++.++|+.+.
T Consensus 48 ~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~-~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~ 122 (236)
T 1zx0_A 48 PYMHALAAAA-SSKGGRVLEVGFGMAIAAS-KVQEA---PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAP 122 (236)
T ss_dssp HHHHHHHHHH-TTTCEEEEEECCTTSHHHH-HHHTS---CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGG
T ss_pred HHHHHHHhhc-CCCCCeEEEEeccCCHHHH-HHHhc---CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhc
Confidence 4444444433 3578899999999999994 44432 2248999999999999999987 336789999998875
Q ss_pred cccccccCcEeEEEE-ccccc----chhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 96 NLESIFLAKFNKIFS-FYCLH----WVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis-~~~l~----~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+++ +++||+|++ .+.++ +..+...++++++++|||||++++..
T Consensus 123 ~~~---~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 123 TLP---DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GSC---TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccC---CCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 343 389999999 55431 22345678999999999999988764
No 87
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=1.3e-13 Score=129.32 Aligned_cols=116 Identities=23% Similarity=0.463 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCC
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQ 95 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~ 95 (433)
....+..++..+..+++.+|||+|||+|..+..++. . + .+++|+|+|+.|++.|+++. ...++++.++|+.+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~-~---~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~ 100 (252)
T 1wzn_A 26 EIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAE-R---G-YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI 100 (252)
T ss_dssp HHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC
T ss_pred HHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHH-C---C-CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhc
Confidence 345566677766656788999999999999955443 2 3 59999999999999999987 334799999999876
Q ss_pred cccccccCcEeEEEEccc-ccch--hhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 96 NLESIFLAKFNKIFSFYC-LHWV--QDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~-l~~~--~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
+.+ ++||+|++... +++. ++...+++++.++|+|||.+++..+
T Consensus 101 ~~~----~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 101 AFK----NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp CCC----SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccC----CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 543 68999998643 3433 4678899999999999999988654
No 88
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.53 E-value=6.4e-14 Score=127.75 Aligned_cols=107 Identities=20% Similarity=0.384 Sum_probs=88.3
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcccccccCcEeEEEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLESIFLAKFNKIFS 110 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis 110 (433)
.++.+|||+|||+|.++..++. . +..+++|+|+|+.+++.|+++. ...++++.++|+...++++ ++||+|++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~-~---~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~---~~fD~v~~ 113 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFL-G---GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPS---ASFDVVLE 113 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHH-T---TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCS---SCEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHH-c---CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCC---CcccEEEE
Confidence 6788999999999999955444 2 2128999999999999999987 3368999999998765443 78999999
Q ss_pred cccccchh---------------hHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 111 FYCLHWVQ---------------DQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 111 ~~~l~~~~---------------d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
..+++++. +...+++++.++|+|||.+++..+...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 114 KGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp ESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred CcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 99886653 668899999999999999999876653
No 89
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.53 E-value=7e-14 Score=133.76 Aligned_cols=122 Identities=18% Similarity=0.287 Sum_probs=94.3
Q ss_pred HHHHHHHHhcC-CCCCCEEEEECCCC---ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccC
Q psy11646 20 KLLSQYIDQFK-WTDNESVLDVGCGP---GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIAD 94 (433)
Q Consensus 20 ~ll~~l~~~l~-~~~~~~VLDIGcG~---G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~ 94 (433)
..+..+++.+. ..+..+|||||||+ |..+ ..+++..+. .+|+++|+|+.|++.|++++ ...+++++++|+.+
T Consensus 63 ~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~-~~~~~~~p~--~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~ 139 (274)
T 2qe6_A 63 KVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTH-EVAQSVNPD--ARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRD 139 (274)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHH-HHHHHHCTT--CEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTC
T ss_pred HHHHHHHHHHhhccCCCEEEEECCCCCCCChHH-HHHHHhCCC--CEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCC
Confidence 34444444443 23457999999999 9887 555555554 49999999999999999987 44689999999976
Q ss_pred Cccc-------c-cccCcEeEEEEcccccchhh--HHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 95 QNLE-------S-IFLAKFNKIFSFYCLHWVQD--QRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 95 ~~l~-------~-~~~~~fD~Vis~~~l~~~~d--~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
.... . ...++||+|+++.++||+++ ...++++++++|+|||.+++.....
T Consensus 140 ~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 140 PEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred chhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 3210 1 11258999999999999986 8899999999999999999987654
No 90
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.53 E-value=2.7e-14 Score=137.26 Aligned_cols=105 Identities=19% Similarity=0.254 Sum_probs=81.1
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCC-----------------------------
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNP----------------------------- 83 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~----------------------------- 83 (433)
++.+|||||||+|..+ .+++. .+ +.+|+|+|+|+.|++.|++++...
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~-~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 146 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSAC-SH--FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQ 146 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGG-GG--CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhc-cC--CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHH
Confidence 6789999999999954 33332 11 249999999999999998854110
Q ss_pred ----CeEEEEecccC-Ccccc--cccCcEeEEEEcccccc----hhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 84 ----KLEFVVANIAD-QNLES--IFLAKFNKIFSFYCLHW----VQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 84 ----~i~~~~~Di~~-~~l~~--~~~~~fD~Vis~~~l~~----~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+++.++|+.. .++++ ...++||+|+++.+++| ++++..++++++++|||||.+++..
T Consensus 147 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 147 LRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 14567778877 44332 23467999999999999 7789999999999999999999864
No 91
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.53 E-value=7.3e-14 Score=130.10 Aligned_cols=127 Identities=24% Similarity=0.433 Sum_probs=96.3
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--
Q psy11646 3 KATLYETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-- 80 (433)
Q Consensus 3 ~a~~Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-- 80 (433)
.|..|+...... .....+..+...+ +++.+|||+|||+|.++. .+++. .+++|+|+|+.+++.|+++.
T Consensus 7 ~a~~yd~~~~~~--~~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~-~l~~~-----~~v~~vD~s~~~~~~a~~~~~~ 76 (243)
T 3d2l_A 7 FAYVYDELMQDV--PYPEWVAWVLEQV--EPGKRIADIGCGTGTATL-LLADH-----YEVTGVDLSEEMLEIAQEKAME 76 (243)
T ss_dssp TTHHHHHHTTTC--CHHHHHHHHHHHS--CTTCEEEEESCTTCHHHH-HHTTT-----SEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcc--cHHHHHHHHHHHc--CCCCeEEEecCCCCHHHH-HHhhC-----CeEEEEECCHHHHHHHHHhhhh
Confidence 456676633221 1233444555554 457899999999999984 44432 49999999999999999987
Q ss_pred CCCCeEEEEecccCCcccccccCcEeEEEEcc-cccch---hhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 81 TNPKLEFVVANIADQNLESIFLAKFNKIFSFY-CLHWV---QDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 81 ~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~-~l~~~---~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
...++++.++|+.+.+++ ++||+|++.. +++|+ .+...+++++.++|+|||.+++..+.
T Consensus 77 ~~~~~~~~~~d~~~~~~~----~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 77 TNRHVDFWVQDMRELELP----EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp TTCCCEEEECCGGGCCCS----SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCceEEEEcChhhcCCC----CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 335799999999876443 7899999986 89988 56788999999999999999986543
No 92
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.52 E-value=2.6e-14 Score=131.33 Aligned_cols=112 Identities=23% Similarity=0.312 Sum_probs=88.4
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-ccc
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-IFL 102 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-~~~ 102 (433)
.++..+...++.+|||||||+|.++. .++.. + .+++|+|+|+.+++.|+++ .++.+...|+.+..... ...
T Consensus 43 ~~~~~~~~~~~~~vLdiG~G~G~~~~-~l~~~---~-~~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~ 114 (227)
T 3e8s_A 43 AILLAILGRQPERVLDLGCGEGWLLR-ALADR---G-IEAVGVDGDRTLVDAARAA---GAGEVHLASYAQLAEAKVPVG 114 (227)
T ss_dssp HHHHHHHHTCCSEEEEETCTTCHHHH-HHHTT---T-CEEEEEESCHHHHHHHHHT---CSSCEEECCHHHHHTTCSCCC
T ss_pred HHHHHhhcCCCCEEEEeCCCCCHHHH-HHHHC---C-CEEEEEcCCHHHHHHHHHh---cccccchhhHHhhcccccccC
Confidence 34444444567899999999999994 44432 2 5999999999999999998 57788888887641111 223
Q ss_pred CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 103 AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
++||+|++..+++ ..++..++++++++|+|||.+++..+..
T Consensus 115 ~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 115 KDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 5699999999999 7889999999999999999999987654
No 93
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.52 E-value=5.3e-14 Score=136.88 Aligned_cols=122 Identities=20% Similarity=0.297 Sum_probs=91.8
Q ss_pred HHHHHHHHhcCC--CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC----------CCCeEE
Q psy11646 20 KLLSQYIDQFKW--TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT----------NPKLEF 87 (433)
Q Consensus 20 ~ll~~l~~~l~~--~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~----------~~~i~~ 87 (433)
.++..+++.+.. +++.+|||+|||+|.++..++. . + ..+++|+|+|+.|++.|+++.. ..++++
T Consensus 19 ~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~-~-~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 94 (313)
T 3bgv_A 19 VLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKK-G-R--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEF 94 (313)
T ss_dssp HHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHH-T-T--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEE
T ss_pred HHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHh-c-C--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEE
Confidence 344444444332 3678999999999999855543 2 2 2599999999999999998761 136899
Q ss_pred EEecccCCcccc-c--ccCcEeEEEEcccccch----hhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 88 VVANIADQNLES-I--FLAKFNKIFSFYCLHWV----QDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 88 ~~~Di~~~~l~~-~--~~~~fD~Vis~~~l~~~----~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
.++|+...++.+ . ..++||+|++..++||+ ++...+++++.++|||||.+++..++..
T Consensus 95 ~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 95 ITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp EECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred EEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 999998865211 1 12589999999999998 4467899999999999999999877654
No 94
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.52 E-value=8.9e-14 Score=124.38 Aligned_cols=106 Identities=18% Similarity=0.219 Sum_probs=80.3
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeE
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
.+++.+|||+|||+|.++. .+++. +.+|+|+|+|+.|++.|+++. +..++++.+.+.... ....+++||+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~-~la~~----~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l--~~~~~~~fD~ 92 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTA-FLAGL----SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL--DHYVREPIRA 92 (185)
T ss_dssp CCTTCEEEESCCTTSHHHH-HHHTT----SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG--GGTCCSCEEE
T ss_pred CCCCCEEEEEcCCCCHHHH-HHHHh----CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH--HhhccCCcCE
Confidence 3678999999999999994 44433 259999999999999999987 336899998777653 2222478999
Q ss_pred EEEcc-cccc--------hhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 108 IFSFY-CLHW--------VQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 108 Vis~~-~l~~--------~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
|+++. .+++ ..+...+++++.++|||||.+++....
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 93 AIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 99873 3332 245667899999999999999987654
No 95
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.52 E-value=2e-13 Score=122.14 Aligned_cols=116 Identities=20% Similarity=0.281 Sum_probs=93.4
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCC--eEEEEecccCCc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPK--LEFVVANIADQN 96 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~--i~~~~~Di~~~~ 96 (433)
...+++.+...++.+|||+|||+|.++..++. . +.+++|+|+++.+++.|+++. ...+ +++..+|+.+.
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~-~----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~- 114 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALAD-E----VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN- 114 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGG-G----SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHH-c----CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-
Confidence 34455566667889999999999999954443 3 259999999999999999987 2344 99999998764
Q ss_pred ccccccCcEeEEEEcccccc-hhhHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 97 LESIFLAKFNKIFSFYCLHW-VQDQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~-~~d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
.+ .++||+|+++.++++ ..+...+++++.++|+|||.+++.......
T Consensus 115 ~~---~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 115 VK---DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp CT---TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred cc---cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 33 378999999999887 467789999999999999999998766543
No 96
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.52 E-value=6.8e-14 Score=133.08 Aligned_cols=125 Identities=15% Similarity=0.211 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHH------HHHHHHhhc-C---CCCeE
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPN------MIKHAKNHH-T---NPKLE 86 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~------~l~~A~~~~-~---~~~i~ 86 (433)
........+++.+..+++.+|||||||+|.++..++....+. .+++|+|+|+. +++.|++++ . ..+++
T Consensus 27 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~--~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~ 104 (275)
T 3bkx_A 27 RQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSS--GHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLT 104 (275)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTT--CEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEE
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCC--CEEEEEECCccccccHHHHHHHHHHHHhcCCCCceE
Confidence 344555667777777889999999999999995444332233 39999999997 999999887 2 15799
Q ss_pred EEEec-ccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 87 FVVAN-IADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 87 ~~~~D-i~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+.++| +....++ ..+++||+|++..+++|+++...+++.+.++++|||.+++.....
T Consensus 105 ~~~~d~~~~~~~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 105 VHFNTNLSDDLGP-IADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp EECSCCTTTCCGG-GTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred EEECChhhhccCC-CCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 99998 3222221 234889999999999999998887788888888899999987543
No 97
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.52 E-value=1.5e-13 Score=131.70 Aligned_cols=104 Identities=12% Similarity=0.185 Sum_probs=85.9
Q ss_pred HhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccC
Q psy11646 27 DQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
..+..+++.+|||||||+|.++...+++. +. .+|+|+|+|+.|++.|++++ +..++++.++|+.+. +. +
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~-~g--a~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l--~d---~ 187 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHV-YG--MRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI--DG---L 187 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHT-TC--CEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG--GG---C
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHc-cC--CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC--CC---C
Confidence 45567899999999999998874455432 32 59999999999999999986 337899999999874 33 8
Q ss_pred cEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+||+|++... .++...+++++.++|||||++++..
T Consensus 188 ~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 188 EFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 8999998655 4688899999999999999999865
No 98
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.51 E-value=8.4e-14 Score=123.31 Aligned_cols=122 Identities=15% Similarity=0.161 Sum_probs=90.5
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCC-CeEEEEecccCCcc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNP-KLEFVVANIADQNL 97 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~-~i~~~~~Di~~~~l 97 (433)
...++..+...++.+|||+|||+|.++. .++...+. .+++|+|+|+.+++.|+++. +.. ++ ++..|... .+
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~-~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-~~ 88 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAI-EWLRSTPQ--TTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-AF 88 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHH-HHHTTSSS--EEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG-GG
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHH-HHHHHCCC--CeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh-hh
Confidence 3445566666788999999999999994 44444433 59999999999999999986 223 67 77888754 23
Q ss_pred cccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHh
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEK 153 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~ 153 (433)
+. ..++||+|++..++++ ..+++++.++|+|||.+++..............
T Consensus 89 ~~-~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~ 139 (178)
T 3hm2_A 89 DD-VPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVESEQMLWAL 139 (178)
T ss_dssp GG-CCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHH
T ss_pred hc-cCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHH
Confidence 32 2278999999999987 678999999999999999887655444333333
No 99
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.51 E-value=5.9e-14 Score=132.45 Aligned_cols=108 Identities=19% Similarity=0.293 Sum_probs=86.3
Q ss_pred CCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCC-------------------------
Q psy11646 30 KWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPK------------------------- 84 (433)
Q Consensus 30 ~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~------------------------- 84 (433)
...++.+|||||||+|.++ ..++.. +..+|+|+|+|+.|++.|+++.....
T Consensus 53 ~~~~~~~vLDlGcG~G~~~-~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQ-LLSACE---SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEK 128 (265)
T ss_dssp SSCCEEEEEEESCTTCCGG-GTTGGG---TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHH
T ss_pred cccCCCEEEEECCCccHHH-HHHhhc---ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHH
Confidence 3356789999999999998 444432 21389999999999999998873222
Q ss_pred -------e-EEEEecccCCcc-cccccCcEeEEEEccccc----chhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 85 -------L-EFVVANIADQNL-ESIFLAKFNKIFSFYCLH----WVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 85 -------i-~~~~~Di~~~~l-~~~~~~~fD~Vis~~~l~----~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+ ++.++|+.+... +....++||+|++..++| +.++...+++++.++|||||.+++..
T Consensus 129 ~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 129 EEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 7 899999987532 222237899999999999 77788999999999999999999876
No 100
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.51 E-value=4.1e-14 Score=129.99 Aligned_cols=108 Identities=15% Similarity=0.145 Sum_probs=77.5
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcccccccCcEeE
Q psy11646 29 FKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
+..+++.+|||+|||+|..+ ..++...+. .+|+|+|+|+.|++.+.+.. ...++.++++|+..........++||+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~-~~la~~~~~--~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTV-SHLADIVDE--GIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHH-HHHHHHTTT--SEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEECCcCCHHH-HHHHHHcCC--CEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeE
Confidence 45568899999999999998 555555553 49999999998765544433 225788888888763110111278999
Q ss_pred EEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 108 IFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
|++... ++ .+...++++++++|||||.+++..
T Consensus 130 V~~~~~-~~-~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 130 IYQDIA-QK-NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEECCC-ST-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecc-Ch-hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999732 22 334456899999999999999874
No 101
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.50 E-value=5.6e-13 Score=132.85 Aligned_cols=116 Identities=16% Similarity=0.259 Sum_probs=95.3
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccC
Q psy11646 19 AKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIAD 94 (433)
Q Consensus 19 ~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~ 94 (433)
......+++.+.+.++.+|||||||+|.++. .+++..+.. +++++|+ +.+++.|++++ ...++++..+|+.
T Consensus 188 ~~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~-~l~~~~p~~--~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~- 262 (369)
T 3gwz_A 188 LTEAGQVAAAYDFSGAATAVDIGGGRGSLMA-AVLDAFPGL--RGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF- 262 (369)
T ss_dssp HHHHHHHHHHSCCTTCSEEEEETCTTSHHHH-HHHHHCTTC--EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-
T ss_pred hhhHHHHHHhCCCccCcEEEEeCCCccHHHH-HHHHHCCCC--eEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-
Confidence 3445677777777788999999999999994 445555544 8999999 99999999876 2368999999997
Q ss_pred CcccccccCcEeEEEEcccccchhhHH--HHHHHHHHhccCCCEEEEEecc
Q psy11646 95 QNLESIFLAKFNKIFSFYCLHWVQDQR--QAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 95 ~~l~~~~~~~fD~Vis~~~l~~~~d~~--~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.+.+ ..||+|++.+++|++++.. .+++++++.|+|||++++.+..
T Consensus 263 ~~~p----~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 263 ETIP----DGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp TCCC----SSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred CCCC----CCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 3344 3799999999999998765 7999999999999999998654
No 102
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.49 E-value=1.3e-13 Score=132.09 Aligned_cols=102 Identities=22% Similarity=0.303 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccccccCcEeEEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLESIFLAKFNKIF 109 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~~~~~~fD~Vi 109 (433)
.++.+|||+|||+|.++..++. . + .+|+|+|+|+.+++.|+++. ...++++.++|+...+. .++||+|+
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~-~---g-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~----~~~fD~i~ 189 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSL-L---G-YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI----QENYDFIV 189 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC----CSCEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHH-C---C-CeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc----cCCccEEE
Confidence 4788999999999999954443 2 3 59999999999999999987 22389999999987654 38999999
Q ss_pred Ecccccchh--hHHHHHHHHHHhccCCCEEEEEec
Q psy11646 110 SFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 110 s~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
++.++||++ +...+++++.++|+|||.+++...
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 190 STVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp ECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 999999984 466899999999999999877653
No 103
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.49 E-value=1.6e-13 Score=124.42 Aligned_cols=113 Identities=23% Similarity=0.298 Sum_probs=88.3
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLES 99 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~ 99 (433)
+..++..+ +++ +|||||||+|..+. .++.. + .+++|+|+|+.+++.|+++. ...++.+.++|+...+++.
T Consensus 21 l~~~~~~~--~~~-~vLdiGcG~G~~~~-~l~~~---~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 92 (202)
T 2kw5_A 21 LVSVANQI--PQG-KILCLAEGEGRNAC-FLASL---G-YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVA 92 (202)
T ss_dssp HHHHHHHS--CSS-EEEECCCSCTHHHH-HHHTT---T-CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCT
T ss_pred HHHHHHhC--CCC-CEEEECCCCCHhHH-HHHhC---C-CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCc
Confidence 44445444 456 99999999999994 44432 3 59999999999999999987 2237899999998765443
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
++||+|++.....+..+...+++++.++|+|||.+++......
T Consensus 93 ---~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 93 ---DAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp ---TTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred ---CCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 7899999975444446788999999999999999999876544
No 104
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.49 E-value=7.4e-14 Score=129.06 Aligned_cols=108 Identities=14% Similarity=0.206 Sum_probs=84.1
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccc-cccCcEeEE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLES-IFLAKFNKI 108 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~-~~~~~fD~V 108 (433)
++.+|||||||+|.++ ..++...+.. .|+|+|+|+.+++.|+++. +..++.++++|+.+. ++. ..+++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~-~~lA~~~p~~--~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~-l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASL-VAMAKDRPEQ--DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV-LHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHH-HHHHHHCTTS--EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH-HHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHH-HHHHHHCCCC--eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH-HHHHcCCCChheE
Confidence 5679999999999999 5555555544 8999999999999999886 446899999998763 221 234899999
Q ss_pred EEcccccchhhH--------HHHHHHHHHhccCCCEEEEEeccC
Q psy11646 109 FSFYCLHWVQDQ--------RQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 109 is~~~l~~~~d~--------~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+++++..|.... ..+++++.++|||||.+++.....
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 998665544321 258999999999999999876433
No 105
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.49 E-value=1.1e-13 Score=128.88 Aligned_cols=129 Identities=19% Similarity=0.215 Sum_probs=89.5
Q ss_pred hhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCe
Q psy11646 7 YETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKL 85 (433)
Q Consensus 7 Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i 85 (433)
|+..++.+...+..++..+ +.+.++++.+|||+|||+|..+..+.....+.+ +|+|+|+|+.|++...+.. ...++
T Consensus 51 yr~w~~~~skla~~ll~~l-~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G--~V~avD~s~~~l~~l~~~a~~r~nv 127 (232)
T 3id6_C 51 YREWNAFRSKLAGAILKGL-KTNPIRKGTKVLYLGAASGTTISHVSDIIELNG--KAYGVEFSPRVVRELLLVAQRRPNI 127 (232)
T ss_dssp EEECCTTTCHHHHHHHTTC-SCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTS--EEEEEECCHHHHHHHHHHHHHCTTE
T ss_pred hhhhchHHHHHHHHHHhhh-hhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCC--EEEEEECcHHHHHHHHHHhhhcCCe
Confidence 6666777776666655443 445578999999999999999944433333444 9999999998864332222 12689
Q ss_pred EEEEecccCCcccccccCcEeEEEEcccccchhhHHH-HHHHHHHhccCCCEEEEEe
Q psy11646 86 EFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQ-AISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 86 ~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~-~l~~i~~~LkpGG~lll~~ 141 (433)
.++++|+..........++||+|++..+. ++... +..++.+.|||||++++..
T Consensus 128 ~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 128 FPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 99999987642212224789999998664 34444 4556677999999999874
No 106
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.48 E-value=3.2e-13 Score=123.34 Aligned_cols=119 Identities=13% Similarity=0.143 Sum_probs=91.5
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCC-CeEEEEecccCCcccc
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNP-KLEFVVANIADQNLES 99 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~-~i~~~~~Di~~~~l~~ 99 (433)
.++..+...++.+|||+|||+|.++..++. . +.+|+|+|+|+.+++.|+++. +.. ++++.++|+.+....
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~~~~~la~-~----~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~- 119 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGSVSVEWCL-A----GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD- 119 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCHHHHHHHH-T----TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-
T ss_pred HHHHhcCCCCCCEEEEecCCCCHHHHHHHH-c----CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-
Confidence 345566667899999999999999954443 3 259999999999999999986 334 799999998763111
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhh
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLS 155 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~ 155 (433)
...||+|++...+ +.. +++++.++|||||++++..............+.
T Consensus 120 --~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~ 168 (204)
T 3njr_A 120 --LPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHA 168 (204)
T ss_dssp --SCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHH
T ss_pred --CCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHH
Confidence 1579999998755 455 999999999999999998776555545444443
No 107
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.48 E-value=2.6e-13 Score=121.15 Aligned_cols=145 Identities=17% Similarity=0.220 Sum_probs=102.4
Q ss_pred CCchhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc
Q psy11646 1 MHKATLYETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH 80 (433)
Q Consensus 1 m~~a~~Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~ 80 (433)
|-..+.|.+.....+.....+...++..+...++.+|||+|||+|..+..++. .. .+++|+|+|+.+++.|++++
T Consensus 1 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~-~~----~~v~~~D~~~~~~~~a~~~~ 75 (192)
T 1l3i_A 1 MIPDDEFIKNPSVPGPTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAG-RV----RRVYAIDRNPEAISTTEMNL 75 (192)
T ss_dssp CCCGGGSCCCTTSCCCCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHT-TS----SEEEEEESCHHHHHHHHHHH
T ss_pred CCChHHhhcCCCCCCCChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHH-hc----CEEEEEECCHHHHHHHHHHH
Confidence 44555565544222122233444455556667899999999999999954443 22 49999999999999999976
Q ss_pred ---CC-CCeEEEEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhc
Q psy11646 81 ---TN-PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSR 156 (433)
Q Consensus 81 ---~~-~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~ 156 (433)
.. .++++.++|+.. .++. .++||+|++..++++ ...+++++.++|+|||.+++..............+..
T Consensus 76 ~~~~~~~~~~~~~~d~~~-~~~~--~~~~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~ 149 (192)
T 1l3i_A 76 QRHGLGDNVTLMEGDAPE-ALCK--IPDIDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRD 149 (192)
T ss_dssp HHTTCCTTEEEEESCHHH-HHTT--SCCEEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHH
T ss_pred HHcCCCcceEEEecCHHH-hccc--CCCCCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHH
Confidence 22 588999998765 2221 147999999988765 4788999999999999999987665544444444443
No 108
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.48 E-value=1.3e-13 Score=133.26 Aligned_cols=116 Identities=17% Similarity=0.268 Sum_probs=90.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC------CCeEEEEeccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN------PKLEFVVANIA 93 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~------~~i~~~~~Di~ 93 (433)
..+..+++.+... +.+|||||||+|.++..++. . + .+|+|+|+|+.|++.|+++... .++++.++|+.
T Consensus 70 ~~~~~~~~~~~~~-~~~vLDlGcG~G~~~~~l~~-~---~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 70 SEAREFATRTGPV-SGPVLELAAGMGRLTFPFLD-L---G-WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHHCCC-CSCEEEETCTTTTTHHHHHT-T---T-CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred HHHHHHHHhhCCC-CCcEEEEeccCCHHHHHHHH-c---C-CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 3344555555433 44999999999999944443 2 2 5899999999999999998722 57999999999
Q ss_pred CCcccccccCcEeEEEEc-ccccchh--hHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 94 DQNLESIFLAKFNKIFSF-YCLHWVQ--DQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 94 ~~~l~~~~~~~fD~Vis~-~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
+.++ .++||+|++. .++++++ +...++++++++|||||.+++..+...
T Consensus 144 ~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 144 AFAL----DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp BCCC----SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred cCCc----CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 8654 2899998864 6677775 468899999999999999999876544
No 109
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.48 E-value=2.3e-13 Score=133.57 Aligned_cols=114 Identities=21% Similarity=0.221 Sum_probs=92.3
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCcc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNL 97 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l 97 (433)
...+++.+.+.++.+|||||||+|.++. .+++..|.. +++++|+ +.+++.|+++. ...++++..+|+. .+.
T Consensus 158 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~-~l~~~~p~~--~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~ 232 (332)
T 3i53_A 158 YTGIAAKYDWAALGHVVDVGGGSGGLLS-ALLTAHEDL--SGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPL 232 (332)
T ss_dssp HTTGGGSSCCGGGSEEEEETCTTSHHHH-HHHHHCTTC--EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCC
T ss_pred HHHHHHhCCCCCCCEEEEeCCChhHHHH-HHHHHCCCC--eEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCC
Confidence 4445566666667899999999999994 445555544 8999999 99999999876 2368999999997 334
Q ss_pred cccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEeccC
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+ .+||+|++.+++|++++. ..++++++++|+|||++++.+...
T Consensus 233 p----~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 233 P----AGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp C----CSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred C----CCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 4 379999999999999774 789999999999999999987543
No 110
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.48 E-value=2.2e-13 Score=133.53 Aligned_cols=117 Identities=14% Similarity=0.189 Sum_probs=93.8
Q ss_pred HHHHHHHHhcCC--CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEeccc
Q psy11646 20 KLLSQYIDQFKW--TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIA 93 (433)
Q Consensus 20 ~ll~~l~~~l~~--~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~ 93 (433)
.....+++.+.+ .++.+|||||||+|..+. .+++..+. .+++++|++ .+++.|+++. + ..++++..+|+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~-~l~~~~p~--~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 150 NPAQLIAQLVNENKIEPLKVLDISASHGLFGI-AVAQHNPN--AEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAF 225 (335)
T ss_dssp HHHHHHHHHHTC--CCCSEEEEETCTTCHHHH-HHHHHCTT--CEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTT
T ss_pred hhHHHHHHhcccccCCCCEEEEECCCcCHHHH-HHHHHCCC--CeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccc
Confidence 344556666666 778899999999999994 44445554 499999999 9999999886 2 246999999998
Q ss_pred CCcccccccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 94 DQNLESIFLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 94 ~~~l~~~~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+.+++ +.||+|++.+++|+++ +...++++++++|+|||++++.+...
T Consensus 226 ~~~~~----~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 226 EVDYG----NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp TSCCC----SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cCCCC----CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 75444 4599999999999984 45789999999999999999887543
No 111
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.48 E-value=4.2e-13 Score=120.06 Aligned_cols=102 Identities=25% Similarity=0.481 Sum_probs=85.5
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSF 111 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~ 111 (433)
+++.+|||+|||+|.++..++. . + .+++|+|+|+.+++.|+++. .++++.++|+...+++. ++||+|++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~-~---~-~~v~~~D~~~~~~~~a~~~~--~~~~~~~~d~~~~~~~~---~~~D~i~~~ 114 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSK-Q---G-HDVLGTDLDPILIDYAKQDF--PEARWVVGDLSVDQISE---TDFDLIVSA 114 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHC--TTSEEEECCTTTSCCCC---CCEEEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHH-C---C-CcEEEEcCCHHHHHHHHHhC--CCCcEEEcccccCCCCC---CceeEEEEC
Confidence 5788999999999999954443 2 2 59999999999999999987 56899999998765543 789999998
Q ss_pred -ccccch--hhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 112 -YCLHWV--QDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 112 -~~l~~~--~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.+++++ ++...+++++.++|+|||.+++....
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 678877 45688999999999999999987643
No 112
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.47 E-value=3e-13 Score=123.39 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=89.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQN 96 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~ 96 (433)
.....+++.+...++.+|||+|||+|..+. .+++. + .+++++|+|+.+++.|++++ +..++++..+|+....
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~-~la~~---~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTA-ILAHL---V-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHH-HHHHH---S-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHH-HHHHh---C-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC
Confidence 344556666677889999999999999994 44443 2 59999999999999999987 3457999999987754
Q ss_pred ccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.. .++||+|++..+++++.+ ++.++|+|||++++....
T Consensus 139 ~~---~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 QA---RAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GG---GCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred cc---CCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 33 378999999999998875 578999999999998754
No 113
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=9.2e-13 Score=116.74 Aligned_cols=124 Identities=15% Similarity=0.241 Sum_probs=96.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQN 96 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~ 96 (433)
.+...++..+...++.+|||+|||+|.++..+ +. + ..+++|+|+|+.+++.|+++. +..++++.++|+.+ +
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l-~~--~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEI-AK--R--CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V 95 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHH-HT--T--SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHH-Hh--c--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c
Confidence 34445555566678899999999999999444 43 2 259999999999999999987 33579999999876 4
Q ss_pred ccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCC
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKP 158 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~ 158 (433)
+++ ++||+|++..+ .+...+++++.++ |||.+++..............+...+
T Consensus 96 ~~~---~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 96 LDK---LEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRG 148 (183)
T ss_dssp GGG---CCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred ccC---CCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcC
Confidence 444 78999999988 5678889999988 99999998876666666666665544
No 114
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.47 E-value=3.1e-13 Score=124.78 Aligned_cols=137 Identities=12% Similarity=0.143 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANI 92 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di 92 (433)
....++..++.. .++.+|||||||+|..+. .++...+.+ .+|+++|+++.+++.|++++ + ..+++++++|+
T Consensus 45 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~-~la~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 45 AKGQIMDAVIRE---YSPSLVLELGAYCGYSAV-RMARLLQPG-ARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp HHHHHHHHHHHH---HCCSEEEEECCTTSHHHH-HHHTTSCTT-CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred HHHHHHHHHHHh---cCCCEEEEECCCCCHHHH-HHHHhCCCC-CEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 344555555544 357899999999999994 455444433 59999999999999999987 2 24699999998
Q ss_pred cCCcccccc----cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCc
Q psy11646 93 ADQNLESIF----LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKW 160 (433)
Q Consensus 93 ~~~~l~~~~----~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W 160 (433)
.+. ++... .++||+|++....++..+....+..+ ++|||||.+++..............+...+.|
T Consensus 120 ~~~-l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~ 189 (221)
T 3u81_A 120 QDL-IPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSSF 189 (221)
T ss_dssp HHH-GGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTTE
T ss_pred HHH-HHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCCc
Confidence 552 22211 26899999998888777666778777 99999999988765544444444444444433
No 115
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.46 E-value=2.1e-13 Score=121.83 Aligned_cols=112 Identities=14% Similarity=0.247 Sum_probs=83.6
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNL 97 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l 97 (433)
.+-..+...+ .+..+|||+|||+|.++ ..+....|. .+|+++|+|+.|++.+++++ .....++...|.... .
T Consensus 38 ~fY~~~~~~l--~~~~~VLDlGCG~GplA-l~l~~~~p~--a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~ 111 (200)
T 3fzg_A 38 DFYTYVFGNI--KHVSSILDFGCGFNPLA-LYQWNENEK--IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-V 111 (200)
T ss_dssp HHHHHHHHHS--CCCSEEEEETCTTHHHH-HHHHCSSCC--CEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-H
T ss_pred HHHHHHHhhc--CCCCeEEEecCCCCHHH-HHHHhcCCC--CEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-C
Confidence 3334444444 56789999999999999 444444444 39999999999999999998 222223444665443 2
Q ss_pred cccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
..++||+|+++.++|++++.+.++.++.+.|+|||.++-.
T Consensus 112 ---~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 112 ---YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp ---TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred ---CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 2388999999999999988888888999999999976654
No 116
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.46 E-value=3.1e-13 Score=122.05 Aligned_cols=109 Identities=17% Similarity=0.269 Sum_probs=84.7
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcccccccCcEe
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNLESIFLAKFN 106 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l~~~~~~~fD 106 (433)
.+++.+|||+|||+|..+..++....+.+ +++|+|+|+.+++.|++++ + ..++++.++|+...+ ....++||
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~fD 95 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD--KYIDCPVK 95 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG--GTCCSCEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh--hhccCCce
Confidence 36789999999999999955444332333 9999999999999999987 2 258999999987643 22337899
Q ss_pred EEEEcccc---------cchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 107 KIFSFYCL---------HWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 107 ~Vis~~~l---------~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+|+++.++ +...+...+++++.++|||||.+++....
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 99998765 12234567999999999999999987643
No 117
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.45 E-value=3e-13 Score=134.48 Aligned_cols=122 Identities=16% Similarity=0.227 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----------C--CCC
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----------T--NPK 84 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----------~--~~~ 84 (433)
.....+..++..+...++.+|||||||+|..+..++ ...+. .+++|+|+|+.+++.|+++. + ..+
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA-~~~g~--~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~r 233 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVA-AATNC--KHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAE 233 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHH-HHCCC--SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHH-HHCCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 344666777888888899999999999999995444 33332 37999999999999998642 1 268
Q ss_pred eEEEEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 85 LEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 85 i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
++|+++|+.+.++... -..||+|+++..++ .++....+.++++.|||||++++....
T Consensus 234 Vefi~GD~~~lp~~d~-~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVssE~f 290 (438)
T 3uwp_A 234 YTLERGDFLSEEWRER-IANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSSKPF 290 (438)
T ss_dssp EEEEECCTTSHHHHHH-HHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEESSCS
T ss_pred eEEEECcccCCccccc-cCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEeecc
Confidence 9999999988655321 14699999988775 468888999999999999999987543
No 118
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=8.6e-13 Score=125.16 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=64.5
Q ss_pred HhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC-------CCeEEEEecccCCccc-
Q psy11646 27 DQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN-------PKLEFVVANIADQNLE- 98 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~-------~~i~~~~~Di~~~~l~- 98 (433)
..+...++.+|||+|||+|.++ ..++...+. .+++|+|+++.+++.|++++.. .+++++++|+.+....
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~-l~la~~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~ 106 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAG-MAVAARLEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKAR 106 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHH-HHHHHHCTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHH
T ss_pred HHhcccCCCEEEEeCChHhHHH-HHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhh
Confidence 3344567889999999999999 455555543 4999999999999999998732 2589999999875110
Q ss_pred ---ccccCcEeEEEEcccccc
Q psy11646 99 ---SIFLAKFNKIFSFYCLHW 116 (433)
Q Consensus 99 ---~~~~~~fD~Vis~~~l~~ 116 (433)
....++||+|+++..+..
T Consensus 107 ~~~~~~~~~fD~Vv~nPPy~~ 127 (260)
T 2ozv_A 107 VEAGLPDEHFHHVIMNPPYND 127 (260)
T ss_dssp HHTTCCTTCEEEEEECCCC--
T ss_pred hhhccCCCCcCEEEECCCCcC
Confidence 122478999999977654
No 119
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.45 E-value=3.6e-13 Score=125.17 Aligned_cols=107 Identities=12% Similarity=0.193 Sum_probs=82.3
Q ss_pred HHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcccccccCc
Q psy11646 26 IDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 26 ~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
++.+...++.+|||+|||+|..+ ..++...+. .+|+|+|+|+.|++.|+++. ...++.++.+|+..........++
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~-~~la~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 143 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTP-SHVADIADK--GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEK 143 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHH-HHHHHHTTT--SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCC
T ss_pred ccccCCCCCCEEEEEcccCCHHH-HHHHHHcCC--cEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCcc
Confidence 55555678899999999999999 555555443 49999999999999999987 347899999998762110011168
Q ss_pred EeEEEEcccccchhhH---HHHHHHHHHhccCCCEEEEE
Q psy11646 105 FNKIFSFYCLHWVQDQ---RQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~---~~~l~~i~~~LkpGG~lll~ 140 (433)
||+|+ |++.++ ..+++++.++|+|||.+++.
T Consensus 144 ~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99999 333444 77799999999999999986
No 120
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=5.1e-14 Score=128.27 Aligned_cols=127 Identities=18% Similarity=0.177 Sum_probs=79.0
Q ss_pred cHHHHHHHHHHHHHhcCC-CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC--CCeEEEEe
Q psy11646 14 QQLDAAKLLSQYIDQFKW-TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN--PKLEFVVA 90 (433)
Q Consensus 14 ~~~~~~~ll~~l~~~l~~-~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~--~~i~~~~~ 90 (433)
-++....+++.+++.+.. .++.+|||+|||+|.++. .++...+. .+++|+|+|+.+++.|++++.. .++++.++
T Consensus 10 p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~-~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 10 PRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAV-SIALACPG--VSVTAVDLSMDALAVARRNAERFGAVVDWAAA 86 (215)
T ss_dssp CCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHH-HHHHHCTT--EEEEEEECC-------------------CCHH
T ss_pred CCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHH-HHHHhCCC--CeEEEEECCHHHHHHHHHHHHHhCCceEEEEc
Confidence 345667777788887766 678899999999999994 44444443 4999999999999999998721 16788888
Q ss_pred cccCCcccc--cccCcEeEEEEcccccchhhH--------------------------HHHHHHHHHhccCCCEEEEEec
Q psy11646 91 NIADQNLES--IFLAKFNKIFSFYCLHWVQDQ--------------------------RQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 91 Di~~~~l~~--~~~~~fD~Vis~~~l~~~~d~--------------------------~~~l~~i~~~LkpGG~lll~~~ 142 (433)
|+.+ +++. ...++||+|+++.++++..+. ..+++++.++|||||.+++...
T Consensus 87 d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 87 DGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred chHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 8866 2321 123789999998776544321 6788999999999999544444
Q ss_pred cC
Q psy11646 143 AF 144 (433)
Q Consensus 143 ~~ 144 (433)
..
T Consensus 166 ~~ 167 (215)
T 4dzr_A 166 GH 167 (215)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 121
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.45 E-value=1e-13 Score=126.34 Aligned_cols=106 Identities=19% Similarity=0.151 Sum_probs=82.8
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC--CCeEEEEecccCCcccccccCc-Ee
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN--PKLEFVVANIADQNLESIFLAK-FN 106 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~--~~i~~~~~Di~~~~l~~~~~~~-fD 106 (433)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|++++ +. .++++.++|+.+.. +....++ ||
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~fD 127 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR----QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL-KQPQNQPHFD 127 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT----TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT-TSCCSSCCEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc----cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH-HhhccCCCCC
Confidence 6789999999999998555542 2248999999999999999987 22 58999999987642 1112368 99
Q ss_pred EEEEcccccchhhHHHHHHHH--HHhccCCCEEEEEeccC
Q psy11646 107 KIFSFYCLHWVQDQRQAISNI--YNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 107 ~Vis~~~l~~~~d~~~~l~~i--~~~LkpGG~lll~~~~~ 144 (433)
+|++..+++ ..+...+++.+ .++|+|||.+++.....
T Consensus 128 ~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 128 VVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 999998865 55677888888 67899999999876543
No 122
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.45 E-value=5.2e-14 Score=129.39 Aligned_cols=107 Identities=19% Similarity=0.249 Sum_probs=79.4
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHH----Hhhc---CCCCeEEEEecccCCcccccccC
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHA----KNHH---TNPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A----~~~~---~~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
..++.+|||||||+|.++ ..++...+. .+|+|+|+|+.|++.+ +++. ...++++.++|+.+.+++... +
T Consensus 25 ~~~~~~vLDiGcG~G~~~-~~la~~~p~--~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d 100 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHP-YKVARQNPS--RLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-G 100 (218)
T ss_dssp TTSSEEEEEESCTTCHHH-HHHHHHCTT--EEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-E
T ss_pred ccCCCEEEEecCCCCHHH-HHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-C
Confidence 467889999999999999 455555544 4999999999988853 3322 335899999999987655422 3
Q ss_pred cEeEEEEccccc--chhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLH--WVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~--~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+++++++..++ |++++..++++++++|||||.+++..
T Consensus 101 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 101 ELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 344344444443 77778999999999999999999854
No 123
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.45 E-value=1.3e-12 Score=123.68 Aligned_cols=107 Identities=16% Similarity=0.205 Sum_probs=76.2
Q ss_pred cCCC-CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCcccccccC
Q psy11646 29 FKWT-DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 29 l~~~-~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
+..+ ++.+|||+|||+|.++. .++...+ .+++|+|+++.+++.|++++ ...++++.++|+.+.. .....+
T Consensus 44 ~~~~~~~~~vLDlG~G~G~~~~-~la~~~~---~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~-~~~~~~ 118 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNGIIPL-LLSTRTK---AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT-DLIPKE 118 (259)
T ss_dssp CCCCSSCCEEEETTCTTTHHHH-HHHTTCC---CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG-GTSCTT
T ss_pred hcCCCCCCEEEEcCCchhHHHH-HHHHhcC---CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh-hhhccC
Confidence 3456 78999999999999994 4444322 38999999999999999987 2246999999998753 112248
Q ss_pred cEeEEEEcccccch--------------------hhHHHHHHHHHHhccCCCEEEEE
Q psy11646 104 KFNKIFSFYCLHWV--------------------QDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 104 ~fD~Vis~~~l~~~--------------------~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
+||+|+++.+++.. .+...+++.+.++|+|||.+++.
T Consensus 119 ~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 119 RADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp CEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 99999998776543 12345566666666666666653
No 124
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.44 E-value=1.1e-12 Score=131.11 Aligned_cols=128 Identities=20% Similarity=0.240 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHhcC--CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEec
Q psy11646 16 LDAAKLLSQYIDQFK--WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVAN 91 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~--~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~D 91 (433)
...+.+++.+...+. ..++.+|||+|||+|.++..++. . + .+|+|+|+|+.+++.|++++ ...++++.++|
T Consensus 214 ~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~-~---g-~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D 288 (381)
T 3dmg_A 214 PASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLAR-M---G-AEVVGVEDDLASVLSLQKGLEANALKAQALHSD 288 (381)
T ss_dssp HHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHH-T---T-CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred HHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHH-c---C-CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 344556666655542 23678999999999999955544 2 2 59999999999999999987 33358999999
Q ss_pred ccCCcccccccCcEeEEEEcccccc-----hhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHH
Q psy11646 92 IADQNLESIFLAKFNKIFSFYCLHW-----VQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLY 151 (433)
Q Consensus 92 i~~~~l~~~~~~~fD~Vis~~~l~~-----~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~ 151 (433)
+.+...+ .++||+|+++.++|+ ..+...+++++.++|+|||.++++.....+....+
T Consensus 289 ~~~~~~~---~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l 350 (381)
T 3dmg_A 289 VDEALTE---EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLL 350 (381)
T ss_dssp TTTTSCT---TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHH
T ss_pred hhhcccc---CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHH
Confidence 9876443 378999999999998 56778899999999999999999876554443333
No 125
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.44 E-value=7.1e-13 Score=121.63 Aligned_cols=106 Identities=15% Similarity=0.345 Sum_probs=84.1
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNKI 108 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~V 108 (433)
.++.+|||||||+|.++ ..++...+. .+++|+|+|+.+++.|+++. +..+++++++|+...+ .....++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~-~~la~~~p~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFV-SGMAKQNPD--INYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT-DYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHH-HHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG-GTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHH-HHHHHHCCC--CCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH-hhcCCCCCCEE
Confidence 45789999999999999 455555554 49999999999999999987 3468999999998743 01223789999
Q ss_pred EEcccccchh--------hHHHHHHHHHHhccCCCEEEEEe
Q psy11646 109 FSFYCLHWVQ--------DQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 109 is~~~l~~~~--------d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+++....|.. ....+++++.++|+|||.+++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 9998765543 13679999999999999998865
No 126
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.44 E-value=2.4e-13 Score=120.61 Aligned_cols=126 Identities=11% Similarity=0.127 Sum_probs=88.5
Q ss_pred hcHHHHHHHHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CC---CCeEE
Q psy11646 13 MQQLDAAKLLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TN---PKLEF 87 (433)
Q Consensus 13 ~~~~~~~~ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~---~~i~~ 87 (433)
..++....+.+.+.+.+. ..++.+|||+|||+|.++..++. . + ..+++|+|+|+.+++.|++++ .. .++++
T Consensus 10 ~~rp~~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~-~-~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 85 (177)
T 2esr_A 10 ITRPTSDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVS-R-G--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTL 85 (177)
T ss_dssp --------CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHH-T-T--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEE
T ss_pred CCCcCHHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHH-c-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEE
Confidence 344555556666666665 45788999999999999855544 2 2 249999999999999999987 21 46899
Q ss_pred EEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHH--HhccCCCEEEEEeccCC
Q psy11646 88 VVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIY--NLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 88 ~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~--~~LkpGG~lll~~~~~~ 145 (433)
..+|+.+. ++ ...++||+|++..+++. ......++.+. ++|+|||.+++......
T Consensus 86 ~~~d~~~~-~~-~~~~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 86 LKMEAERA-ID-CLTGRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ECSCHHHH-HH-HBCSCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EECcHHHh-HH-hhcCCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 99998762 11 22367999999887643 44566677776 99999999999765543
No 127
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.44 E-value=6.8e-13 Score=141.11 Aligned_cols=119 Identities=13% Similarity=0.261 Sum_probs=92.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---------CCCCeEEEEe
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---------TNPKLEFVVA 90 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---------~~~~i~~~~~ 90 (433)
..++.+++.+...++.+|||||||+|.++ ..+++..+.. .+|+|+|+|+.|++.|++++ ...++++.++
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~la-i~LAr~g~p~-a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqG 785 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLL-DSLLDYPTSL-QTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDG 785 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHH-HHHTSSCCCC-CEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEES
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHH-HHHHHhCCCC-CeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEEC
Confidence 33444444444457889999999999999 5555544222 49999999999999998843 2357999999
Q ss_pred cccCCcccccccCcEeEEEEcccccchhhHH--HHHHHHHHhccCCCEEEEEeccC
Q psy11646 91 NIADQNLESIFLAKFNKIFSFYCLHWVQDQR--QAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 91 Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~--~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
|+...+... ++||+|++..+++|+++.. .+++++.++|||| .+++..+..
T Consensus 786 Da~dLp~~d---~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 786 SILEFDSRL---HDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp CTTSCCTTS---CSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred chHhCCccc---CCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 999876554 8899999999999998755 5899999999999 777776543
No 128
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.43 E-value=7.8e-13 Score=131.18 Aligned_cols=115 Identities=15% Similarity=0.304 Sum_probs=93.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCC
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQ 95 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~ 95 (433)
.....+++.+.+.++.+|||||||+|.++ ..+++..+. .+++++|+ +.+++.|++++ . ..++++..+|+.+.
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~-~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDIS-AAMLKHFPE--LDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE 252 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHH-HHHHHHCTT--CEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHH-HHHHHHCCC--CeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC
Confidence 44556677777778899999999999999 455555554 49999999 99999999876 2 24699999999876
Q ss_pred cccccccCcEeEEEEcccccchhh--HHHHHHHHHHhccCCCEEEEEecc
Q psy11646 96 NLESIFLAKFNKIFSFYCLHWVQD--QRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~l~~~~d--~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+++ .+|+|++..++|++++ ...++++++++|+|||++++.+..
T Consensus 253 ~~~-----~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 253 SYP-----EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp CCC-----CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred CCC-----CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 544 2399999999999876 788999999999999999887644
No 129
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=1.2e-12 Score=119.80 Aligned_cols=112 Identities=15% Similarity=0.237 Sum_probs=87.0
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcc
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNL 97 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l 97 (433)
+...+++.+...++.+|||||||+|..+..+ ++..+.. .+++++|+|+.+++.|++++ ...++++..+|+... +
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l-~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~ 141 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVT-AEIVGED-GLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLG-Y 141 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHH-HHHHCTT-SEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC-C
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHH-HHHhCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC-C
Confidence 3445566666678999999999999999544 4443221 49999999999999999886 345799999998543 2
Q ss_pred cccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+ ..++||+|++..+++++. .++.++|||||.+++....
T Consensus 142 ~--~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 142 E--PLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp G--GGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred C--CCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 2 137899999999999886 3789999999999988643
No 130
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.43 E-value=8.9e-13 Score=119.89 Aligned_cols=120 Identities=13% Similarity=0.129 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEeccc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIA 93 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~ 93 (433)
....++..+...+ +++.+|||+|||+|.++.. +++. +. .+++|+|+|+.+++.|+++. ...++++.++|+.
T Consensus 46 ~~~~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~-l~~~-~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 119 (205)
T 3grz_A 46 TTQLAMLGIERAM--VKPLTVADVGTGSGILAIA-AHKL-GA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSLL 119 (205)
T ss_dssp HHHHHHHHHHHHC--SSCCEEEEETCTTSHHHHH-HHHT-TC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT
T ss_pred cHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHH-HHHC-CC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc
Confidence 3344444444333 5788999999999999854 4432 22 49999999999999999987 3334999999987
Q ss_pred CCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhH
Q psy11646 94 DQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDL 150 (433)
Q Consensus 94 ~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~ 150 (433)
.. . .++||+|+++.+++++ ..+++++.++|+|||.+++...........
T Consensus 120 ~~--~---~~~fD~i~~~~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~ 168 (205)
T 3grz_A 120 AD--V---DGKFDLIVANILAEIL---LDLIPQLDSHLNEDGQVIFSGIDYLQLPKI 168 (205)
T ss_dssp TT--C---CSCEEEEEEESCHHHH---HHHGGGSGGGEEEEEEEEEEEEEGGGHHHH
T ss_pred cc--C---CCCceEEEECCcHHHH---HHHHHHHHHhcCCCCEEEEEecCcccHHHH
Confidence 63 2 2789999999888764 678999999999999999976554443333
No 131
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.43 E-value=7.3e-13 Score=123.80 Aligned_cols=108 Identities=17% Similarity=0.337 Sum_probs=80.4
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---------CCCCeEEEEecccCCcccc-cc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---------TNPKLEFVVANIADQNLES-IF 101 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---------~~~~i~~~~~Di~~~~l~~-~~ 101 (433)
.++.+|||||||+|.++ ..++...+.. .++|+|+|+.|++.|++++ ...++.++++|+... ++. +.
T Consensus 45 ~~~~~vLDiGcG~G~~~-~~la~~~p~~--~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~-l~~~~~ 120 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLL-VELSPLFPDT--LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH-LPNFFY 120 (235)
T ss_dssp -CCEEEEEETCTTCHHH-HHHGGGSTTS--EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC-HHHHCC
T ss_pred CCCCeEEEEccCCcHHH-HHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh-hhhhCC
Confidence 45678999999999999 5556555544 8999999999999988653 236899999999762 221 23
Q ss_pred cCcEeEEEEcccccchhh--------HHHHHHHHHHhccCCCEEEEEecc
Q psy11646 102 LAKFNKIFSFYCLHWVQD--------QRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d--------~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.++||.|+++..-.|... ...+++++.++|||||.+++....
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 489999998776544321 146899999999999999987643
No 132
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.42 E-value=5.3e-13 Score=122.72 Aligned_cols=106 Identities=12% Similarity=0.291 Sum_probs=82.8
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNKI 108 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~V 108 (433)
.++.+|||||||+|.++ ..+++..+. .+++|+|+|+.+++.|+++. +..+++++++|+...+ .....++||.|
T Consensus 37 ~~~~~vLDiGcG~G~~~-~~la~~~p~--~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~-~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFI-SGMAKQNPD--INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT-DVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTTSHHH-HHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH-HHCCTTSCCEE
T ss_pred CCCceEEEEecCCCHHH-HHHHHHCCC--CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHH-hhcCcCCcCEE
Confidence 35789999999999999 455555554 49999999999999999886 3468999999998732 11234789999
Q ss_pred EEcccccchhh--------HHHHHHHHHHhccCCCEEEEEe
Q psy11646 109 FSFYCLHWVQD--------QRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 109 is~~~l~~~~d--------~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+++....|... ...+++++.++|+|||.+++..
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 98776544321 3678999999999999999875
No 133
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.42 E-value=1.2e-12 Score=121.16 Aligned_cols=111 Identities=17% Similarity=0.264 Sum_probs=87.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-CCCeEEEEecccCCccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-NPKLEFVVANIADQNLE 98 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-~~~i~~~~~Di~~~~l~ 98 (433)
.++..+++.+...++.+|||||||+|..+. .++... .+++|+|+|+.+++.|+++.. ..++++..+|+......
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~-~l~~~~----~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~ 131 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTA-LIAEIV----DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEE 131 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHH-HHHHHS----SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHH-HHHHHc----CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccccc
Confidence 445556666667789999999999999994 444332 499999999999999999872 22899999998763222
Q ss_pred ccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
.++||+|++..+++++.+ ++.++|+|||.+++.....
T Consensus 132 ---~~~fD~v~~~~~~~~~~~------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 132 ---EKPYDRVVVWATAPTLLC------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp ---GCCEEEEEESSBBSSCCH------HHHHTEEEEEEEEEEECSS
T ss_pred ---CCCccEEEECCcHHHHHH------HHHHHcCCCcEEEEEEcCC
Confidence 378999999999998753 6889999999999986543
No 134
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.42 E-value=8.8e-13 Score=129.35 Aligned_cols=113 Identities=15% Similarity=0.250 Sum_probs=91.6
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCc
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQN 96 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~ 96 (433)
....+++.+.+.+ .+|||||||+|..+. .+++..+. .+++++|+ +.+++.|+++. ...++++..+|+.+ +
T Consensus 156 ~~~~~~~~~~~~~-~~vlDvG~G~G~~~~-~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 229 (334)
T 2ip2_A 156 AFHEIPRLLDFRG-RSFVDVGGGSGELTK-AILQAEPS--ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E 229 (334)
T ss_dssp HHHHHHHHSCCTT-CEEEEETCTTCHHHH-HHHHHCTT--CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C
T ss_pred HHHHHHHhCCCCC-CEEEEeCCCchHHHH-HHHHHCCC--CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C
Confidence 3455666666666 899999999999994 44445554 49999999 99999999886 13679999999876 3
Q ss_pred ccccccCcEeEEEEcccccchhhHH--HHHHHHHHhccCCCEEEEEecc
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQR--QAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~~--~~l~~i~~~LkpGG~lll~~~~ 143 (433)
++ ++||+|++..++|++++.. .++++++++|+|||++++.+..
T Consensus 230 ~~----~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 230 VP----SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp CC----SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CC----CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 33 5799999999999886654 8999999999999999998654
No 135
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.41 E-value=1.2e-12 Score=121.15 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=82.3
Q ss_pred CCCCCEEEEECCC-CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccccccCcEeE
Q psy11646 31 WTDNESVLDVGCG-PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 31 ~~~~~~VLDIGcG-~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
.+++.+|||+||| +|.++..++. .. ..+|+|+|+|+.+++.|+++. ...++++.++|+... .....++||+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~-~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~--~~~~~~~fD~ 126 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEK-FF---NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGII--KGVVEGTFDV 126 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHH-HH---CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSS--TTTCCSCEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHH-hc---CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhh--hhcccCceeE
Confidence 4678999999999 9999954443 32 259999999999999999987 223799999997532 1122388999
Q ss_pred EEEcccccchhh-------------------HHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 108 IFSFYCLHWVQD-------------------QRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 108 Vis~~~l~~~~d-------------------~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
|+++.++++..+ ...+++++.++|||||.+++..+..
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK 182 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 999988765433 4778999999999999999876443
No 136
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.41 E-value=8.5e-13 Score=131.63 Aligned_cols=111 Identities=21% Similarity=0.367 Sum_probs=90.5
Q ss_pred HHHHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc
Q psy11646 19 AKLLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL 97 (433)
Q Consensus 19 ~~ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l 97 (433)
......+++.+. +.++.+|||||||+|.++ ..+++..+.. +++++|+ +.+++.|++. +++++..+|+.+ ++
T Consensus 194 ~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~-~~l~~~~~~~--~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~ 265 (372)
T 1fp1_D 194 ATEMKRMLEIYTGFEGISTLVDVGGGSGRNL-ELIISKYPLI--KGINFDL-PQVIENAPPL---SGIEHVGGDMFA-SV 265 (372)
T ss_dssp HHHHHHHHHHCCTTTTCSEEEEETCTTSHHH-HHHHHHCTTC--EEEEEEC-HHHHTTCCCC---TTEEEEECCTTT-CC
T ss_pred HHHHHHHHHHhhccCCCCEEEEeCCCCcHHH-HHHHHHCCCC--eEEEeCh-HHHHHhhhhc---CCCEEEeCCccc-CC
Confidence 334556666665 567889999999999999 4555555543 8999999 9999888763 579999999976 44
Q ss_pred cccccCcEeEEEEcccccchhhHH--HHHHHHHHhccCCCEEEEEec
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQR--QAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~~--~~l~~i~~~LkpGG~lll~~~ 142 (433)
+ . ||+|++..++|++++.. .++++++++|+|||++++.+.
T Consensus 266 ~----~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 266 P----Q-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp C----C-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C----C-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 3 3 99999999999998876 899999999999999999864
No 137
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.41 E-value=6.9e-13 Score=132.09 Aligned_cols=111 Identities=18% Similarity=0.319 Sum_probs=90.4
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCccc
Q psy11646 23 SQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNLE 98 (433)
Q Consensus 23 ~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l~ 98 (433)
..+++.+.+.++.+|||||||+|.++. .++...+. .+++++|+ +.+++.|+++. + ..++++..+|+.+ +++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~-~l~~~~~~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 246 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLA-AIALRAPH--LRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLP 246 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHH-HHHHHCTT--CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHH-HHHHHCCC--CEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCC
Confidence 445666666788999999999999994 44445554 49999999 99999999886 2 2479999999875 344
Q ss_pred ccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEec
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~ 142 (433)
..||+|++.+++|++++. ..++++++++|+|||++++.+.
T Consensus 247 ----~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 247 ----VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ----CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ----CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 349999999999998775 4899999999999999998775
No 138
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.41 E-value=5.7e-13 Score=124.59 Aligned_cols=102 Identities=12% Similarity=0.095 Sum_probs=81.0
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNKI 108 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~V 108 (433)
.++.+|||||||+|..+. .++...+. .+|+|+|+|+.|++.|+++. +..+++++++|+.+.+......++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~-~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSL-PIKICFPH--LHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHH-HHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHH-HHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE
Confidence 467899999999999984 44433343 49999999999999999876 3457999999987754321123789999
Q ss_pred EEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 109 FSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 109 is~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
++..+ .+...+++++.++|+|||.+++.
T Consensus 146 ~~~~~----~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 146 TARAV----ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEECC----SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEecc----CCHHHHHHHHHHhcCCCCEEEEE
Confidence 99773 56788999999999999999875
No 139
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.41 E-value=9.3e-13 Score=125.84 Aligned_cols=120 Identities=21% Similarity=0.280 Sum_probs=93.9
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEe
Q psy11646 14 QQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVA 90 (433)
Q Consensus 14 ~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~ 90 (433)
.++..+.+++.+++.+. .++.+|||+|||+|..+. .++...+. .+++|+|+|+.+++.|+++. +..++++.++
T Consensus 91 pr~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~-~la~~~~~--~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~ 166 (276)
T 2b3t_A 91 PRPDTECLVEQALARLP-EQPCRILDLGTGTGAIAL-ALASERPD--CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS 166 (276)
T ss_dssp CCTTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHH-HHHHHCTT--SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC
T ss_pred cCchHHHHHHHHHHhcc-cCCCEEEEecCCccHHHH-HHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 34567778888888776 567899999999999994 44444444 49999999999999999987 3357999999
Q ss_pred cccCCcccccccCcEeEEEEcccccch-------------------------hhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 91 NIADQNLESIFLAKFNKIFSFYCLHWV-------------------------QDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 91 Di~~~~l~~~~~~~fD~Vis~~~l~~~-------------------------~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
|+... ++ .++||+|+++.+++.. ......++++.++|+|||.+++..
T Consensus 167 d~~~~-~~---~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 167 DWFSA-LA---GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp STTGG-GT---TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred chhhh-cc---cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 98763 32 3789999998655432 345778999999999999998864
No 140
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.41 E-value=1.6e-12 Score=126.91 Aligned_cols=112 Identities=19% Similarity=0.268 Sum_probs=89.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQN 96 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~ 96 (433)
..+..+++.+..+++.+|||||||+|.++. .+++..+.. .+|+|+|+|+.+++.|++++ +..++++.++|+.+..
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~-~la~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAA-VMSRVVGEK-GLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV 139 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHH-HHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHH-HHHHhcCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc
Confidence 445566677777889999999999999994 444444422 38999999999999999986 3356999999987743
Q ss_pred ccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
... ++||+|++..+++++. +++.++|||||.+++...
T Consensus 140 ~~~---~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 140 PEF---SPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GGG---CCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred ccC---CCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 332 7899999999999886 467899999999998753
No 141
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.41 E-value=8.6e-13 Score=122.14 Aligned_cols=121 Identities=16% Similarity=0.251 Sum_probs=92.0
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC--CCeEEE
Q psy11646 14 QQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN--PKLEFV 88 (433)
Q Consensus 14 ~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~--~~i~~~ 88 (433)
..+....++..++...+.+++.+|||||||+|..+. .++..++.+ .+++++|+++.+++.|++++ +. .+++++
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~-~la~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGL-YILNGLADN-TTLTCIDPESEHQRQAKALFREAGYSPSRVRFL 114 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHH-HHHHHSCTT-SEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHH-HHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEE
Confidence 345666777777777655556699999999999994 445444433 59999999999999999987 22 479999
Q ss_pred EecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 89 VANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 89 ~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
++|+.+. ++....++||+|++.... .+....++++.++|||||.+++.
T Consensus 115 ~gda~~~-l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 115 LSRPLDV-MSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CSCHHHH-GGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEEEEEEEEET
T ss_pred EcCHHHH-HHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcCCCcEEEEe
Confidence 9998653 222224789999987543 34567899999999999998874
No 142
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.41 E-value=1.2e-12 Score=129.29 Aligned_cols=115 Identities=21% Similarity=0.339 Sum_probs=92.3
Q ss_pred HHHHHhcCCCC-CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCcc
Q psy11646 23 SQYIDQFKWTD-NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNL 97 (433)
Q Consensus 23 ~~l~~~l~~~~-~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l 97 (433)
..+++.+.+.+ +.+|||||||+|.++ ..+++..|. .+++++|+ +.+++.|+++. ...++++..+|+.+.+.
T Consensus 168 ~~~l~~~~~~~~~~~vlDvG~G~G~~~-~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 168 VDVVSELGVFARARTVIDLAGGHGTYL-AQVLRRHPQ--LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN 243 (352)
T ss_dssp HHHHHTCGGGTTCCEEEEETCTTCHHH-HHHHHHCTT--CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG
T ss_pred HHHHHhCCCcCCCCEEEEeCCCcCHHH-HHHHHhCCC--CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc
Confidence 35666776666 889999999999999 455555555 49999999 88999999876 12479999999987541
Q ss_pred cccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEecc
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
...+.||+|++..++|++++. ..++++++++|+|||++++.+..
T Consensus 244 --~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 244 --FEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp --GTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred --cCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 122679999999999998764 78999999999999999998643
No 143
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.40 E-value=3e-12 Score=121.39 Aligned_cols=102 Identities=27% Similarity=0.463 Sum_probs=82.9
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSF 111 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~ 111 (433)
.++.+|||||||+|.++. .+++..+. .+++|+|+|+.+++.|+++. .++.+.++|+...++++ ++||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~-~l~~~~~~--~~v~~vD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~---~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTH-AFADALPE--ITTFGLDVSKVAIKAAAKRY--PQVTFCVASSHRLPFSD---TSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHH-HHHHTCTT--SEEEEEESCHHHHHHHHHHC--TTSEEEECCTTSCSBCT---TCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHH-HHHHhCCC--CeEEEEeCCHHHHHHHHHhC--CCcEEEEcchhhCCCCC---CceeEEEEe
Confidence 568899999999999994 44444332 49999999999999999986 67899999998766544 789999997
Q ss_pred ccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchh
Q psy11646 112 YCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIY 148 (433)
Q Consensus 112 ~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~ 148 (433)
.+.. .++++.++|||||.+++..+......
T Consensus 156 ~~~~-------~l~~~~~~L~pgG~l~~~~~~~~~~~ 185 (269)
T 1p91_A 156 YAPC-------KAEELARVVKPGGWVITATPGPRHLM 185 (269)
T ss_dssp SCCC-------CHHHHHHHEEEEEEEEEEEECTTTTH
T ss_pred CChh-------hHHHHHHhcCCCcEEEEEEcCHHHHH
Confidence 7643 47899999999999999887665443
No 144
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.40 E-value=1.9e-12 Score=127.58 Aligned_cols=109 Identities=21% Similarity=0.314 Sum_probs=86.4
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNL 97 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l 97 (433)
...+.+.+...++.+|||||||+|.++. .+++. +..+|+|+|+|+ |++.|+++. + ..+++++++|+.+.++
T Consensus 53 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~-~la~~---g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 127 (340)
T 2fyt_A 53 RDFIYQNPHIFKDKVVLDVGCGTGILSM-FAAKA---GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL 127 (340)
T ss_dssp HHHHHHCGGGTTTCEEEEETCTTSHHHH-HHHHT---TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC
T ss_pred HHHHHhhhhhcCCCEEEEeeccCcHHHH-HHHHc---CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC
Confidence 3445555555678999999999999984 44433 224999999997 999999876 2 2689999999988665
Q ss_pred cccccCcEeEEEEcc---cccchhhHHHHHHHHHHhccCCCEEE
Q psy11646 98 ESIFLAKFNKIFSFY---CLHWVQDQRQAISNIYNLLMPGGEVL 138 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~---~l~~~~d~~~~l~~i~~~LkpGG~ll 138 (433)
+. ++||+|++.. .+++..+...++.++.++|||||.++
T Consensus 128 ~~---~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 PV---EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SC---SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CC---CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 53 7899999876 45666678889999999999999987
No 145
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.39 E-value=2.2e-12 Score=119.34 Aligned_cols=111 Identities=17% Similarity=0.228 Sum_probs=82.0
Q ss_pred HHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcccccccCc
Q psy11646 26 IDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 26 ~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
++.+...++.+|||+|||+|.++. .+++..+.. .+++|+|+|+.|++.++++. ...++++.++|+..........++
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~-~la~~~~~~-~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTAS-HVSDIVGWE-GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHH-HHHHHHCTT-SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCC
T ss_pred HHhcCCCCCCEEEEEeccCCHHHH-HHHHHhCCC-eEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCC
Confidence 344446788999999999999994 444443222 39999999999999998887 336899999999863211112368
Q ss_pred EeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 105 FNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
||+|++..+ .......++.++.++|||||.+++.
T Consensus 144 ~D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 144 VDVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 999998765 2222344599999999999999987
No 146
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.39 E-value=2e-12 Score=121.55 Aligned_cols=123 Identities=15% Similarity=0.233 Sum_probs=94.4
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCccc
Q psy11646 23 SQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 23 ~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l~ 98 (433)
..++..+...++.+|||+|||+|.++..++....+. .+++++|+++.+++.|++++ +..++++..+|+.+.+++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEK--GLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 455666667889999999999999995444432333 49999999999999999986 236899999999876444
Q ss_pred ccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhh
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLS 155 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~ 155 (433)
+ ++||+|++. .+++..+++++.++|+|||.+++..+...........+.
T Consensus 164 ~---~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~ 212 (258)
T 2pwy_A 164 E---AAYDGVALD-----LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAE 212 (258)
T ss_dssp T---TCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHT
T ss_pred C---CCcCEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 3 789999983 346668899999999999999998766544444444444
No 147
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.39 E-value=5.6e-13 Score=121.50 Aligned_cols=104 Identities=12% Similarity=0.033 Sum_probs=80.9
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeEEE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNKIF 109 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~Vi 109 (433)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|++++ ...++++.++|+.+. ++ ...++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~----~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~-~~-~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR----YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF-LA-QKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT----TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH-HS-SCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhc----CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH-Hh-hcCCCCCEEE
Confidence 6789999999999999555542 2248999999999999999987 225899999998762 11 1236899999
Q ss_pred EcccccchhhHHHHHHHHHH--hccCCCEEEEEecc
Q psy11646 110 SFYCLHWVQDQRQAISNIYN--LLMPGGEVLLLLNA 143 (433)
Q Consensus 110 s~~~l~~~~d~~~~l~~i~~--~LkpGG~lll~~~~ 143 (433)
+...++ ..+...+++.+.+ +|+|||.+++....
T Consensus 128 ~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 128 VDPPFR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ECCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 988855 4566778888866 59999999987644
No 148
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.39 E-value=1.6e-12 Score=123.31 Aligned_cols=124 Identities=13% Similarity=0.234 Sum_probs=90.3
Q ss_pred HHHHHHHHHhcCC-CCCCEEEEECCCC--ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC---CCCeEEEEecc
Q psy11646 19 AKLLSQYIDQFKW-TDNESVLDVGCGP--GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT---NPKLEFVVANI 92 (433)
Q Consensus 19 ~~ll~~l~~~l~~-~~~~~VLDIGcG~--G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~---~~~i~~~~~Di 92 (433)
+..+.+.+..+.. ....+|||||||+ +..+..+++...|. .+|+++|.|+.|++.|++++. ..+++|+++|+
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~--arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~ 140 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPE--SRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTT--CEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCT
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCC--CEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecc
Confidence 3444444444432 2346899999997 43443666655665 499999999999999999883 24699999999
Q ss_pred cCCcc--c-ccccCcEe-----EEEEcccccchhh---HHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 93 ADQNL--E-SIFLAKFN-----KIFSFYCLHWVQD---QRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 93 ~~~~l--~-~~~~~~fD-----~Vis~~~l~~~~d---~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
.+... . ....+.|| .|+++.+|||+++ +..+++++.+.|+|||+|+++..+.
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 87421 0 00124455 6889999999987 5689999999999999999987654
No 149
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.39 E-value=7.7e-13 Score=120.30 Aligned_cols=98 Identities=19% Similarity=0.213 Sum_probs=79.5
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeEEE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNKIF 109 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~Vi 109 (433)
++.+|||+|||+|..+. .++...+. .+++|+|+|+.+++.|+++. ...++++.++|+.+.+ +. ++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~-~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~---~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGI-PLSIVRPE--AHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SE---PPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHH-HHHHHCTT--SEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CC---SCEEEEE
T ss_pred CCCeEEEECCCCCHHHH-HHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-cc---CCcCEEE
Confidence 47899999999999994 44444443 49999999999999999876 3346999999998753 22 7899999
Q ss_pred EcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 110 SFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 110 s~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+... .+...+++++.++|+|||.+++..
T Consensus 138 ~~~~----~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 138 SRAF----ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp CSCS----SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred Eecc----CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 8643 456789999999999999998864
No 150
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.39 E-value=1.3e-12 Score=124.63 Aligned_cols=125 Identities=18% Similarity=0.323 Sum_probs=96.0
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----C--CCCeEEEEecccCC
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----T--NPKLEFVVANIADQ 95 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~--~~~i~~~~~Di~~~ 95 (433)
+..++..+...++.+|||+|||+|.++..++....+. .+++++|+++.+++.|++++ + ..++++.++|+.+.
T Consensus 88 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 88 AAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPA--GQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred HHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 3455666667889999999999999995544433333 49999999999999999886 1 36899999999876
Q ss_pred cccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhc
Q psy11646 96 NLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSR 156 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~ 156 (433)
+++. ++||+|++. .+++..++.++.++|+|||.+++..+...........+..
T Consensus 166 ~~~~---~~~D~v~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~ 218 (280)
T 1i9g_A 166 ELPD---GSVDRAVLD-----MLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRA 218 (280)
T ss_dssp CCCT---TCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCC---CceeEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 5443 789999983 3356688999999999999999988766555555554443
No 151
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.39 E-value=2.1e-12 Score=127.58 Aligned_cols=111 Identities=17% Similarity=0.188 Sum_probs=86.8
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCc
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQN 96 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~ 96 (433)
....+++.+.+.++.+|||||||+|..+. .+++..+. .+++++|++ .++. +++. ...++++..+|+.+ +
T Consensus 172 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~-~l~~~~p~--~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~-~ 244 (348)
T 3lst_A 172 EHLILARAGDFPATGTVADVGGGRGGFLL-TVLREHPG--LQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR-E 244 (348)
T ss_dssp THHHHHHHSCCCSSEEEEEETCTTSHHHH-HHHHHCTT--EEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT-C
T ss_pred hHHHHHHhCCccCCceEEEECCccCHHHH-HHHHHCCC--CEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC-C
Confidence 34567777777888999999999999994 44555554 489999994 4554 3332 23579999999862 2
Q ss_pred ccccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEecc
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
++ +||+|++..++|++++. ..++++++++|||||++++.+..
T Consensus 245 ~p-----~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 245 VP-----HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp CC-----CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred CC-----CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 32 79999999999999876 68999999999999999998653
No 152
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.38 E-value=9.6e-13 Score=125.60 Aligned_cols=105 Identities=16% Similarity=0.276 Sum_probs=81.0
Q ss_pred CCCEEEEECCCCCh----hHHHHhcccCCC-C-CcEEEEEeCCHHHHHHHHhhcC------------------------C
Q psy11646 33 DNESVLDVGCGPGN----VTSKLLLPNLPK-S-VVKLVGLDVSPNMIKHAKNHHT------------------------N 82 (433)
Q Consensus 33 ~~~~VLDIGcG~G~----~~~~~l~~~~~~-~-~~~v~gvDiS~~~l~~A~~~~~------------------------~ 82 (433)
++.+|||+|||+|. ++ ..++...+. . ..+|+|+|+|+.|++.|++... .
T Consensus 105 ~~~rIld~GCgTGee~ysiA-i~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~ 183 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIA-ITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE 183 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHH-HHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred CCcEEEEeeccCChhHHHHH-HHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCC
Confidence 45799999999998 33 233333221 1 2599999999999999998640 0
Q ss_pred ----------CCeEEEEecccCCcccccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEE
Q psy11646 83 ----------PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 83 ----------~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~ 140 (433)
.++.|.++|+.+.+++ ..++||+|+|.++++|+++. .++++++++.|+|||.+++.
T Consensus 184 ~~~~v~~~lr~~V~F~~~dl~~~~~~--~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 184 GLVRVRQELANYVEFSSVNLLEKQYN--VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp SEEEECHHHHTTEEEEECCTTCSSCC--CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CceeechhhcccCeEEecccCCCCCC--cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 2589999999875443 12689999999999998654 78999999999999999873
No 153
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.38 E-value=2.7e-12 Score=127.93 Aligned_cols=112 Identities=20% Similarity=0.411 Sum_probs=89.6
Q ss_pred HHHHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc
Q psy11646 19 AKLLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL 97 (433)
Q Consensus 19 ~~ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l 97 (433)
......+++.+. +.++.+|||||||+|.++ ..+++..|.. +++++|+ +.+++.|++. .++++..+|+.+ ++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~-~~l~~~~p~~--~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~ 259 (368)
T 3reo_A 188 TITMKKILEMYNGFEGLTTIVDVGGGTGAVA-SMIVAKYPSI--NAINFDL-PHVIQDAPAF---SGVEHLGGDMFD-GV 259 (368)
T ss_dssp HHHHHHHHTTCCTTTTCSEEEEETCTTSHHH-HHHHHHCTTC--EEEEEEC-HHHHTTCCCC---TTEEEEECCTTT-CC
T ss_pred hhHHHHHHHhcccccCCCEEEEeCCCcCHHH-HHHHHhCCCC--EEEEEeh-HHHHHhhhhc---CCCEEEecCCCC-CC
Confidence 344556666665 567889999999999999 4555555654 8999999 9998887754 689999999976 45
Q ss_pred cccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEecc
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
++ + |+|++..++|++++. ..++++++++|+|||++++.+..
T Consensus 260 p~---~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 260 PK---G--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp CC---C--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CC---C--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 53 3 999999999988654 57899999999999999998654
No 154
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.38 E-value=2.4e-12 Score=128.70 Aligned_cols=114 Identities=19% Similarity=0.237 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEeccc
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIA 93 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~ 93 (433)
...+...+.......++.+|||||||+|.++..+ ++. +..+|+|+|+| .|++.|+++. ...+++++++|++
T Consensus 48 ~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~l-a~~---g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 122 (376)
T 3r0q_C 48 MDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWS-AQA---GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHH-HHT---TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGG
T ss_pred HHHHHHHHHhccccCCCCEEEEeccCcCHHHHHH-Hhc---CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchh
Confidence 3444555555555678899999999999999444 432 32499999999 9999999887 2256999999998
Q ss_pred CCcccccccCcEeEEEEcccccch---hhHHHHHHHHHHhccCCCEEEEE
Q psy11646 94 DQNLESIFLAKFNKIFSFYCLHWV---QDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 94 ~~~l~~~~~~~fD~Vis~~~l~~~---~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
+.+++ ++||+|++..+.+++ .+...++..+.++|||||.+++.
T Consensus 123 ~~~~~----~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 123 DISLP----EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp GCCCS----SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hcCcC----CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 86554 789999997655554 45788999999999999998764
No 155
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=1.4e-12 Score=128.97 Aligned_cols=100 Identities=19% Similarity=0.276 Sum_probs=80.9
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCcccccccCcEeE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
.++.+|||||||+|.++.. +++. +..+|+|+|+|+ |++.|+++. ...+++++++|+++.+++. ++||+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~-la~~---g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~fD~ 136 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMF-AAKA---GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPV---EKVDI 136 (349)
T ss_dssp HTTCEEEEESCTTSHHHHH-HHHT---TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS---SCEEE
T ss_pred CCCCEEEEEeccchHHHHH-HHHC---CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCC---CceEE
Confidence 5788999999999999844 4433 224999999995 999999887 2245999999999876554 89999
Q ss_pred EEEccc---ccchhhHHHHHHHHHHhccCCCEEEE
Q psy11646 108 IFSFYC---LHWVQDQRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 108 Vis~~~---l~~~~d~~~~l~~i~~~LkpGG~lll 139 (433)
|++..+ +++..+...++.++.++|||||.++.
T Consensus 137 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 137 IISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 999765 44446788999999999999999874
No 156
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.38 E-value=1.9e-12 Score=114.63 Aligned_cols=121 Identities=17% Similarity=0.210 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCC
Q psy11646 16 LDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQ 95 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~ 95 (433)
+.+..+++. +.... .++.+|||+|||+|.++ ..+++ .+ +++|+|+|+.|++. ..++++.++|+.+
T Consensus 8 ~~~~~l~~~-l~~~~-~~~~~vLD~GcG~G~~~-~~l~~----~~-~v~gvD~s~~~~~~------~~~~~~~~~d~~~- 72 (170)
T 3q87_B 8 EDTYTLMDA-LEREG-LEMKIVLDLGTSTGVIT-EQLRK----RN-TVVSTDLNIRALES------HRGGNLVRADLLC- 72 (170)
T ss_dssp HHHHHHHHH-HHHHT-CCSCEEEEETCTTCHHH-HHHTT----TS-EEEEEESCHHHHHT------CSSSCEEECSTTT-
T ss_pred ccHHHHHHH-HHhhc-CCCCeEEEeccCccHHH-HHHHh----cC-cEEEEECCHHHHhc------ccCCeEEECChhh-
Confidence 344555554 33322 35679999999999999 44442 22 99999999999987 2578999999977
Q ss_pred cccccccCcEeEEEEcccccchhhH---------HHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhh
Q psy11646 96 NLESIFLAKFNKIFSFYCLHWVQDQ---------RQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLS 155 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~l~~~~d~---------~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~ 155 (433)
+++. ++||+|+++.++++..+. ...++++.+.+ |||.+++..............+.
T Consensus 73 ~~~~---~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~ 137 (170)
T 3q87_B 73 SINQ---ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLE 137 (170)
T ss_dssp TBCG---GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHH
T ss_pred hccc---CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHH
Confidence 3443 789999999999875443 56788888888 99999998755544434433333
No 157
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.38 E-value=1.1e-12 Score=121.50 Aligned_cols=104 Identities=22% Similarity=0.351 Sum_probs=81.4
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEeccc-CCcc
Q psy11646 19 AKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIA-DQNL 97 (433)
Q Consensus 19 ~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~-~~~l 97 (433)
..++..++..+. +++.+|||||||+|.++. .++.. + .+|+|+|+|+.|++.|+++. .++++.++|+. ..++
T Consensus 35 ~~l~~~~~~~~~-~~~~~vLDiGcG~G~~~~-~l~~~---~-~~v~~vD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~ 106 (226)
T 3m33_A 35 ELTFDLWLSRLL-TPQTRVLEAGCGHGPDAA-RFGPQ---A-ARWAAYDFSPELLKLARANA--PHADVYEWNGKGELPA 106 (226)
T ss_dssp THHHHHHHHHHC-CTTCEEEEESCTTSHHHH-HHGGG---S-SEEEEEESCHHHHHHHHHHC--TTSEEEECCSCSSCCT
T ss_pred HHHHHHHHHhcC-CCCCeEEEeCCCCCHHHH-HHHHc---C-CEEEEEECCHHHHHHHHHhC--CCceEEEcchhhccCC
Confidence 445555554432 578899999999999994 44433 2 59999999999999999984 68999999994 4333
Q ss_pred cccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEE
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVL 138 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~ll 138 (433)
+ .+++||+|+++ .++..+++++.++|||||.++
T Consensus 107 ~--~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 107 G--LGAPFGLIVSR------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp T--CCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEE
T ss_pred c--CCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEE
Confidence 3 13799999997 356778999999999999988
No 158
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.37 E-value=1.6e-12 Score=128.31 Aligned_cols=120 Identities=25% Similarity=0.355 Sum_probs=91.8
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccccc
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLESIF 101 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~~~ 101 (433)
.+++.+...++.+|||+|||+|.++ ..+++..+.. +++|+|+|+.|++.|+++. ....+++...|+....
T Consensus 187 ~ll~~l~~~~~~~VLDlGcG~G~~~-~~la~~~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~----- 258 (343)
T 2pjd_A 187 LLLSTLTPHTKGKVLDVGCGAGVLS-VAFARHSPKI--RLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV----- 258 (343)
T ss_dssp HHHHHSCTTCCSBCCBTTCTTSHHH-HHHHHHCTTC--BCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-----
T ss_pred HHHHhcCcCCCCeEEEecCccCHHH-HHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-----
Confidence 3444554456779999999999999 4455454443 8999999999999999987 3334677888876532
Q ss_pred cCcEeEEEEcccccc-----hhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHH
Q psy11646 102 LAKFNKIFSFYCLHW-----VQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLY 151 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~-----~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~ 151 (433)
.++||+|+++.++|+ ..+...+++++.++|||||.+++......+....+
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l 313 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVL 313 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHH
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHH
Confidence 378999999999985 34678899999999999999999876555543333
No 159
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.37 E-value=1.5e-12 Score=116.05 Aligned_cols=122 Identities=12% Similarity=0.097 Sum_probs=88.3
Q ss_pred HHHHHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecc
Q psy11646 18 AAKLLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANI 92 (433)
Q Consensus 18 ~~~ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di 92 (433)
...+.+.+.+.+. ..++.+|||+|||+|.++..++. . +..+++|+|+|+.+++.|++++ . ..++++.++|+
T Consensus 28 ~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~-~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 103 (187)
T 2fhp_A 28 TDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVS-R---GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA 103 (187)
T ss_dssp CHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHH-T---TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHH-c---CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcH
Confidence 3444455555553 34788999999999999855544 2 2249999999999999999987 2 24799999998
Q ss_pred cCCccc-ccccCcEeEEEEcccccchhhHHHHHHHH--HHhccCCCEEEEEeccC
Q psy11646 93 ADQNLE-SIFLAKFNKIFSFYCLHWVQDQRQAISNI--YNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 93 ~~~~l~-~~~~~~fD~Vis~~~l~~~~d~~~~l~~i--~~~LkpGG~lll~~~~~ 144 (433)
.+.... ....++||+|+++.+++ ..+....+..+ .++|+|||.+++.....
T Consensus 104 ~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 104 NRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 763110 01147899999998855 34556667777 88999999999876544
No 160
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.37 E-value=1.5e-12 Score=122.80 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=82.2
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNKI 108 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~V 108 (433)
.++.+|||||||+|..+ ..++...+. .+|+++|+|+.+++.|+++. +..+++++++|+++.+......++||+|
T Consensus 79 ~~~~~vLDiG~G~G~~~-i~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPG-LPLKIVRPE--LELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTH-HHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHH-HHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEE
Confidence 46889999999999998 445555554 49999999999999999987 4457999999998754321223789999
Q ss_pred EEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 109 FSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 109 is~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
++..+ .+...++..+.++|||||++++..
T Consensus 156 ~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 156 VARAV----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EEESS----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EECCc----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 99754 356788999999999999988754
No 161
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.37 E-value=2.3e-12 Score=121.25 Aligned_cols=123 Identities=16% Similarity=0.242 Sum_probs=93.5
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEecccCCccc
Q psy11646 23 SQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVANIADQNLE 98 (433)
Q Consensus 23 ~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~Di~~~~l~ 98 (433)
..++..+...++.+|||+|||+|.++..++....+. .+++++|+|+.+++.|++++ +. .++++.++|+.+. ++
T Consensus 83 ~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~ 159 (255)
T 3mb5_A 83 ALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPE--GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IE 159 (255)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CC
T ss_pred HHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCC--eEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cC
Confidence 355666667889999999999999995554432444 49999999999999999987 32 3499999999754 44
Q ss_pred ccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhc
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSR 156 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~ 156 (433)
. ++||+|++. .+++..+++++.++|+|||.+++..+...........+..
T Consensus 160 ~---~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~ 209 (255)
T 3mb5_A 160 E---ENVDHVILD-----LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLRE 209 (255)
T ss_dssp C---CSEEEEEEC-----SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred C---CCcCEEEEC-----CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 3 789999984 3466778999999999999999887665554444444443
No 162
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.37 E-value=3.4e-12 Score=127.41 Aligned_cols=120 Identities=20% Similarity=0.331 Sum_probs=90.0
Q ss_pred HHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC---CCeEEEEecccCCccc
Q psy11646 25 YIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN---PKLEFVVANIADQNLE 98 (433)
Q Consensus 25 l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~---~~i~~~~~Di~~~~l~ 98 (433)
+++.+...++.+|||+|||+|.++. .++...+. .+|+|+|+|+.|++.|++++ +. .++++...|+.+. ++
T Consensus 214 ll~~l~~~~~~~VLDlGcG~G~~s~-~la~~~p~--~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~-~~ 289 (375)
T 4dcm_A 214 FMQHLPENLEGEIVDLGCGNGVIGL-TLLDKNPQ--AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG-VE 289 (375)
T ss_dssp HHHTCCCSCCSEEEEETCTTCHHHH-HHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT-CC
T ss_pred HHHhCcccCCCeEEEEeCcchHHHH-HHHHHCCC--CEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc-CC
Confidence 4556665677899999999999994 45555444 49999999999999999987 21 2588899998763 33
Q ss_pred ccccCcEeEEEEcccccchh-----hHHHHHHHHHHhccCCCEEEEEeccCCchhhHH
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQ-----DQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLY 151 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~-----d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~ 151 (433)
. ++||+|+++.++|+.. ....+++++.++|+|||.++++.....+.....
T Consensus 290 ~---~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l 344 (375)
T 4dcm_A 290 P---FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL 344 (375)
T ss_dssp T---TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHH
T ss_pred C---CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHH
Confidence 3 7899999999998642 234689999999999999999876555443333
No 163
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.37 E-value=1.3e-12 Score=122.92 Aligned_cols=121 Identities=14% Similarity=0.120 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHhcCCC--CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEE
Q psy11646 16 LDAAKLLSQYIDQFKWT--DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVV 89 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~--~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~ 89 (433)
+....++..++..+... ++.+|||+|||+|.++..++. ..+. .+++|+|+|+.|++.|+++. . ..++++.+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~-~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 122 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGA-TLNG--WYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVK 122 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHH-HHHC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHH-hCCC--CeEEEEECCHHHHHHHHHHHHHcCCCccEEEEE
Confidence 45566777776655432 577999999999998844443 3332 49999999999999999987 2 23599999
Q ss_pred ecccCC---cccccccCcEeEEEEcccccchh-h--------------HHHHHHHHHHhccCCCEEEE
Q psy11646 90 ANIADQ---NLESIFLAKFNKIFSFYCLHWVQ-D--------------QRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 90 ~Di~~~---~l~~~~~~~fD~Vis~~~l~~~~-d--------------~~~~l~~i~~~LkpGG~lll 139 (433)
+|+.+. +++...+++||+|+++.++++.. + ....+.+++++|||||.+.+
T Consensus 123 ~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 123 VPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp CCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred cchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 997652 12210025899999998776543 1 12346778888888887543
No 164
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.37 E-value=4.5e-12 Score=126.07 Aligned_cols=112 Identities=22% Similarity=0.392 Sum_probs=90.0
Q ss_pred HHHHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc
Q psy11646 19 AKLLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL 97 (433)
Q Consensus 19 ~~ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l 97 (433)
......+++.+. +.+..+|||||||+|.++. .+++..|.. +++++|+ +.+++.|++. .++++..+|+.+ ++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~-~l~~~~p~~--~~~~~D~-~~~~~~a~~~---~~v~~~~~D~~~-~~ 257 (364)
T 3p9c_A 186 IIITKKLLELYHGFEGLGTLVDVGGGVGATVA-AIAAHYPTI--KGVNFDL-PHVISEAPQF---PGVTHVGGDMFK-EV 257 (364)
T ss_dssp HHHHHHHHHHCCTTTTCSEEEEETCTTSHHHH-HHHHHCTTC--EEEEEEC-HHHHTTCCCC---TTEEEEECCTTT-CC
T ss_pred HHHHHHHHHhcccccCCCEEEEeCCCCCHHHH-HHHHHCCCC--eEEEecC-HHHHHhhhhc---CCeEEEeCCcCC-CC
Confidence 344556677666 6678899999999999994 455555654 8999999 8898887754 689999999987 55
Q ss_pred cccccCcEeEEEEcccccchhh--HHHHHHHHHHhccCCCEEEEEecc
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQD--QRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d--~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+. + |+|++..++|++++ ...+++++++.|||||++++.+..
T Consensus 258 p~---~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 258 PS---G--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp CC---C--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CC---C--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 53 3 99999999998854 568899999999999999998654
No 165
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.37 E-value=1.6e-12 Score=124.10 Aligned_cols=116 Identities=19% Similarity=0.283 Sum_probs=87.3
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-C---CCCeEEEEecccCCcccc
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-T---NPKLEFVVANIADQNLES 99 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~---~~~i~~~~~Di~~~~l~~ 99 (433)
.++..+...++.+|||+|||+|..+..++....+. .+++|+|+++.+++.|++++ . ..++++.++|+.+ +++.
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~ 177 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGK--GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISD 177 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTS--SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCS
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcC
Confidence 55566667789999999999999995444332333 49999999999999999987 2 2579999999876 3443
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhH
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDL 150 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~ 150 (433)
++||+|++ +.+++..+++++.++|+|||.+++..+........
T Consensus 178 ---~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 220 (275)
T 1yb2_A 178 ---QMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFDQSEKT 220 (275)
T ss_dssp ---CCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHH
T ss_pred ---CCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHH
Confidence 78999998 34567789999999999999999987654333333
No 166
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.36 E-value=2.2e-12 Score=119.90 Aligned_cols=112 Identities=17% Similarity=0.193 Sum_probs=80.8
Q ss_pred HHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcccccccCc
Q psy11646 26 IDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 26 ~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
++.+..+++.+|||+|||+|.++..++....+. .+++|+|+|+.|++.+.++. ...++++.++|+.+........++
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~--~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPD--GLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTT--CEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCC
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCc
Confidence 344556788999999999999994444332233 39999999988766665554 226899999999874211123478
Q ss_pred EeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
||+|++..+ .......++.++.++|||||.+++..
T Consensus 148 ~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 148 VDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 999999665 22233556889999999999999864
No 167
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.36 E-value=3.6e-12 Score=128.81 Aligned_cols=117 Identities=16% Similarity=0.229 Sum_probs=88.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHH-------Hhhc---C--CCCeEE
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHA-------KNHH---T--NPKLEF 87 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A-------~~~~---~--~~~i~~ 87 (433)
..+..+++.+...++.+|||||||+|..+ ..++...+. .+|+|+|+++.+++.| ++++ + ..++++
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la-~~LA~~~g~--~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~ 305 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCV-VQAALECGC--ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEF 305 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHH-HHHHHHHCC--SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHH-HHHHHHCCC--CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEE
Confidence 44556677777788999999999999999 444544333 3899999999999988 7765 2 368999
Q ss_pred EEecccCCc--ccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 88 VVANIADQN--LESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 88 ~~~Di~~~~--l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.++|....+ +. ...++||+|+++.++ +.++...+++++.+.|||||.+++..
T Consensus 306 i~gD~~~~~~~~~-~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 306 SLKKSFVDNNRVA-ELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EESSCSTTCHHHH-HHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred EEcCccccccccc-cccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEee
Confidence 887643221 11 113689999998777 34678889999999999999998864
No 168
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.36 E-value=4.8e-12 Score=119.05 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=85.8
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEeccc
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIA 93 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~ 93 (433)
...++..++.. .++.+|||||||+|..+ ..++...+.+ .+|+++|+|+.+++.|++++ + ..++++.++|+.
T Consensus 51 ~~~~l~~l~~~---~~~~~VLdiG~G~G~~~-~~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 125 (248)
T 3tfw_A 51 QGQFLALLVRL---TQAKRILEIGTLGGYST-IWMARELPAD-GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPAL 125 (248)
T ss_dssp HHHHHHHHHHH---HTCSEEEEECCTTSHHH-HHHHTTSCTT-CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHhh---cCCCEEEEecCCchHHH-HHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 34444444433 46789999999999999 4555555533 59999999999999999987 2 247999999986
Q ss_pred CCccccc-ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 94 DQNLESI-FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 94 ~~~l~~~-~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+. ++.. ..++||+|++... ..+....++++.++|||||.+++..
T Consensus 126 ~~-l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 126 QS-LESLGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp HH-HHTCCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred HH-HHhcCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 53 2211 1258999998654 4456778999999999999988754
No 169
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.36 E-value=8.7e-13 Score=130.85 Aligned_cols=114 Identities=14% Similarity=0.253 Sum_probs=86.6
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCC------CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEeccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCG------PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIA 93 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG------~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~ 93 (433)
.+.+.++..+. .++.+||||||| +|..+..+++..++.. +|+|+|+|+.|. ....+++|+++|+.
T Consensus 204 ~~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a--~V~GVDiSp~m~------~~~~rI~fv~GDa~ 274 (419)
T 3sso_A 204 PHYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRG--QIYGLDIMDKSH------VDELRIRTIQGDQN 274 (419)
T ss_dssp HHHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTC--EEEEEESSCCGG------GCBTTEEEEECCTT
T ss_pred HHHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHh------hcCCCcEEEEeccc
Confidence 34445555554 356899999999 6666657776666654 999999999983 13368999999998
Q ss_pred CCcccc---cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 94 DQNLES---IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 94 ~~~l~~---~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+.++.. ...++||+|++.. .|+..+...++++++++|||||++++.+..
T Consensus 275 dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 865541 0138999999975 477788999999999999999999987643
No 170
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.36 E-value=3.4e-12 Score=126.91 Aligned_cols=104 Identities=12% Similarity=0.240 Sum_probs=85.5
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC----CCCeEEEEecccCC--cccccccCcE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT----NPKLEFVVANIADQ--NLESIFLAKF 105 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~----~~~i~~~~~Di~~~--~l~~~~~~~f 105 (433)
..+.+|||||||+|.++. .+++..|.. +++++|+ +.+++.|+++.. ..++++..+|+.+. +++ ++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~-~l~~~~p~~--~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p----~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWAT-QCVQYNKEV--EVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP----TGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHH-HHHHHSTTC--EEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC----CCC
T ss_pred cCCCEEEEeCCCcCHHHH-HHHHhCCCC--EEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC----CCc
Confidence 356799999999999994 445455544 9999999 999999999872 24799999999875 233 689
Q ss_pred eEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEecc
Q psy11646 106 NKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 106 D~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
|+|++..++|++++. ..+++++++.|+|||++++.+..
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 999999999988654 57899999999999999997643
No 171
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.36 E-value=7.3e-12 Score=121.49 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=79.7
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-------CCCCeEEEEecccCCcccccccC
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-------TNPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-------~~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
.+++.+|||||||+|..+..+++ ..+. .+++++|+++.+++.|++++ ..+++++..+|+...... ...+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~-~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~ 168 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLR-HGTV--EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ-TPDN 168 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHT-CTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS-SCTT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHh-CCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh-ccCC
Confidence 35678999999999999955543 3332 49999999999999999876 246899999998764221 1237
Q ss_pred cEeEEEEcccccchhhH----HHHHHHHHHhccCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLHWVQDQ----RQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~----~~~l~~i~~~LkpGG~lll~~ 141 (433)
+||+|++....++.+.. ..++++++++|+|||.+++..
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 89999998766554322 578999999999999998863
No 172
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.36 E-value=2.3e-12 Score=127.74 Aligned_cols=112 Identities=21% Similarity=0.371 Sum_probs=90.4
Q ss_pred HHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCccc
Q psy11646 23 SQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNLE 98 (433)
Q Consensus 23 ~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l~ 98 (433)
..+++.+...++.+|||||||+|..+. .+++..+. .+++++|+ +.+++.|++++ + ..++++..+|+.+ +++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~-~l~~~~~~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 247 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAA-AIARRAPH--VSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLP 247 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHH-HHHHHCTT--CEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHH-HHHHhCCC--CEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCC
Confidence 345566666788999999999999994 44445554 48999999 99999999876 1 2479999999875 344
Q ss_pred ccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEecc
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
..||+|++..++|++++. ..++++++++|+|||++++.+..
T Consensus 248 ----~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 248 ----RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ----SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 359999999999998765 58999999999999999988654
No 173
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.36 E-value=1e-12 Score=115.37 Aligned_cols=104 Identities=16% Similarity=0.104 Sum_probs=79.3
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCccccc--ccCcEeE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESI--FLAKFNK 107 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~--~~~~fD~ 107 (433)
++.+|||+|||+|..+..++. . + .+++|+|+|+.+++.|+++. .. ++++.++|+.+. ++.. ..++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~-~---~-~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~-~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAAS-E---G-WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVF-LPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHH-T---T-CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHH-HHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHH-C---C-CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHH-HHhhhccCCceEE
Confidence 678999999999999954443 2 2 36999999999999999987 22 789999998763 1211 1248999
Q ss_pred EEEcccccchhhHHHHHHHHH--HhccCCCEEEEEeccCC
Q psy11646 108 IFSFYCLHWVQDQRQAISNIY--NLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~--~~LkpGG~lll~~~~~~ 145 (433)
|+++.+++ .+...+++.+. ++|+|||.+++......
T Consensus 114 i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 114 AFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp EEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred EEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 99998876 45556666666 99999999998765443
No 174
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.35 E-value=2.3e-12 Score=127.52 Aligned_cols=100 Identities=21% Similarity=0.396 Sum_probs=83.5
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEE
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFS 110 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis 110 (433)
+.++.+|||||||+|..+ ..+++..|.. +++++|+ +.+++.|++. .++++..+|+.+ +++ .||+|++
T Consensus 186 ~~~~~~vlDvG~G~G~~~-~~l~~~~p~~--~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~p-----~~D~v~~ 252 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTA-KIICETFPKL--KCIVFDR-PQVVENLSGS---NNLTYVGGDMFT-SIP-----NADAVLL 252 (352)
T ss_dssp HTTCSEEEEETCTTSHHH-HHHHHHCTTC--EEEEEEC-HHHHTTCCCB---TTEEEEECCTTT-CCC-----CCSEEEE
T ss_pred cccCceEEEeCCCccHHH-HHHHHHCCCC--eEEEeeC-HHHHhhcccC---CCcEEEeccccC-CCC-----CccEEEe
Confidence 456789999999999999 4555555544 8999999 9999988764 569999999865 333 3999999
Q ss_pred cccccchhhHH--HHHHHHHHhccC---CCEEEEEecc
Q psy11646 111 FYCLHWVQDQR--QAISNIYNLLMP---GGEVLLLLNA 143 (433)
Q Consensus 111 ~~~l~~~~d~~--~~l~~i~~~Lkp---GG~lll~~~~ 143 (433)
..++|++++.. .++++++++||| ||++++.+..
T Consensus 253 ~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 253 KYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred ehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 99999998776 899999999999 9999998654
No 175
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.35 E-value=5.2e-12 Score=117.49 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEec
Q psy11646 16 LDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVAN 91 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~D 91 (433)
+....++..++.. .++.+|||||||+|..+. .++...+. .+|+++|+++.+++.|++++ + ..+++++++|
T Consensus 57 ~~~~~~l~~~~~~---~~~~~vLDiG~G~G~~~~-~la~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 130 (232)
T 3ntv_A 57 RLTLDLIKQLIRM---NNVKNILEIGTAIGYSSM-QFASISDD--IHVTTIERNETMIQYAKQNLATYHFENQVRIIEGN 130 (232)
T ss_dssp HHHHHHHHHHHHH---HTCCEEEEECCSSSHHHH-HHHTTCTT--CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred HHHHHHHHHHHhh---cCCCEEEEEeCchhHHHH-HHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 3444455555443 467899999999999994 45544443 49999999999999999987 2 2489999999
Q ss_pred ccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 92 IADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 92 i~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
+.+. ++....++||+|++... ..+...+++++.++|+|||.+++.
T Consensus 131 ~~~~-~~~~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 131 ALEQ-FENVNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp GGGC-HHHHTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHH-HHhhccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 8764 22012478999998754 345677899999999999999874
No 176
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.34 E-value=5.2e-12 Score=116.40 Aligned_cols=116 Identities=20% Similarity=0.229 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANI 92 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di 92 (433)
....++..++.. .++.+|||||||+|..+ ..++...+.+ .+|+++|+++.+++.|++++ + ..++++.++|+
T Consensus 51 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~-~~la~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 51 EQAQLLALLVKL---MQAKKVIDIGTFTGYSA-IAMGLALPKD-GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEECCTTSHHH-HHHHTTCCTT-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred HHHHHHHHHHHh---hCCCEEEEeCCcchHHH-HHHHHhCCCC-CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 344555555543 36779999999999999 4555555433 59999999999999999987 2 24699999998
Q ss_pred cCCccccccc----CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 93 ADQNLESIFL----AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 93 ~~~~l~~~~~----~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+. ++.... ++||+|++... ..+...+++++.++|+|||.+++..
T Consensus 126 ~~~-~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 126 KDT-LAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp HHH-HHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHH-HHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 653 222111 68999997554 3456788999999999999998864
No 177
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.34 E-value=1.7e-12 Score=121.99 Aligned_cols=121 Identities=13% Similarity=0.126 Sum_probs=88.1
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhccc-CCCCCcEEEEEeCCHHHHHHHHhhcCCC-------C-----
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPN-LPKSVVKLVGLDVSPNMIKHAKNHHTNP-------K----- 84 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~-~~~~~~~v~gvDiS~~~l~~A~~~~~~~-------~----- 84 (433)
+..++..+++.+...++.+|||+|||+|.++..++... .+. .+++|+|+|+.+++.|+++.... +
T Consensus 36 a~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~--~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~ 113 (250)
T 1o9g_A 36 ATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSL--RQVIASDVDPAPLELAAKNLALLSPAGLTARELERR 113 (250)
T ss_dssp HHHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGE--EEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCC--CeEEEEECCHHHHHHHHHHHHHhhhccccccchhhh
Confidence 34677777766654467899999999999985444321 222 58999999999999999876211 1
Q ss_pred --------------------eE-------------EEEecccCCcccc--c-ccCcEeEEEEcccccch---------hh
Q psy11646 85 --------------------LE-------------FVVANIADQNLES--I-FLAKFNKIFSFYCLHWV---------QD 119 (433)
Q Consensus 85 --------------------i~-------------~~~~Di~~~~l~~--~-~~~~fD~Vis~~~l~~~---------~d 119 (433)
++ +.++|+.+. .+. . ...+||+|+++.++++. ..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~ 192 (250)
T 1o9g_A 114 EQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDP-RALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQP 192 (250)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCG-GGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHH
T ss_pred hhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccc-cccccccCCCCceEEEeCCCeeccccccccccccH
Confidence 66 999998763 210 0 12489999998876544 33
Q ss_pred HHHHHHHHHHhccCCCEEEEEe
Q psy11646 120 QRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 120 ~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+++++.++|+|||+++++.
T Consensus 193 ~~~~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 193 VAGLLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEeC
Confidence 5688999999999999999854
No 178
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.34 E-value=1.9e-12 Score=120.17 Aligned_cols=105 Identities=16% Similarity=0.171 Sum_probs=77.4
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCC-HHHHHHH---Hhhc---CCCCeEEEEecccCCcccccccCc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVS-PNMIKHA---KNHH---TNPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS-~~~l~~A---~~~~---~~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
.++.+|||||||+|.++. .++...+. .+|+|+|+| +.|++.| +++. +..++.+.++|++..+ ....+.
T Consensus 23 ~~~~~vLDiGCG~G~~~~-~la~~~~~--~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~--~~~~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIY-KLAINDQN--TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLP--FELKNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHH-HHHHTCTT--EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCC--GGGTTC
T ss_pred CCCCEEEEEeccCcHHHH-HHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhh--hhccCe
Confidence 578899999999999994 44433332 589999999 7777776 6655 3467999999998763 222266
Q ss_pred EeEEEEcccccch-----hhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWV-----QDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~-----~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+|.|.++..+.+. .+...++++++++|||||.+++..
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 7888777654332 234578999999999999999843
No 179
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.34 E-value=9.6e-12 Score=119.24 Aligned_cols=120 Identities=18% Similarity=0.236 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeC-CHHHHHHHHhhc-----CC--------C
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDV-SPNMIKHAKNHH-----TN--------P 83 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDi-S~~~l~~A~~~~-----~~--------~ 83 (433)
...+.+.+.......++.+|||||||+|..+. .++.. +..+|+|+|+ |+.+++.|+++. .. .
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~-~~a~~---~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~ 139 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSI-VAFLA---GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRA 139 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHH-HHHHT---TCSEEEEEECSCHHHHHHHHHHHHTTCC----------C
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHH-HHHHc---CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCC
Confidence 44555555554444578899999999999984 44432 2248999999 899999999886 11 2
Q ss_pred CeEEEEecccCCccccc----ccCcEeEEEEcccccchhhHHHHHHHHHHhcc---C--CCEEEEEec
Q psy11646 84 KLEFVVANIADQNLESI----FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLM---P--GGEVLLLLN 142 (433)
Q Consensus 84 ~i~~~~~Di~~~~l~~~----~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~Lk---p--GG~lll~~~ 142 (433)
++++...|..+.. ... ..++||+|++..++++.++...+++.+.++|+ | ||.+++...
T Consensus 140 ~v~~~~~~~~~~~-~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 140 SPKVVPYRWGDSP-DSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp CCEEEECCTTSCT-HHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred CeEEEEecCCCcc-HHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 5777777765421 111 24789999999999999999999999999999 9 998877643
No 180
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.34 E-value=5.1e-12 Score=117.62 Aligned_cols=110 Identities=13% Similarity=0.274 Sum_probs=85.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcc
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNL 97 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l 97 (433)
+...+++.+...++.+|||||||+|.++. .+++..+ .+++++|+++.+++.|+++. +..++++..+|+.. ++
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~-~la~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~ 153 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAA-LISEIVK---TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK-GF 153 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHH-HHHHHHC---SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHH-HHHHHhC---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc-CC
Confidence 44455555666788999999999999994 4454433 38999999999999999986 33569999999732 23
Q ss_pred cccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+. ...||+|++..+++++.+ ++.++|+|||.+++....
T Consensus 154 ~~--~~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 154 PP--KAPYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp GG--GCCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEECS
T ss_pred CC--CCCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEec
Confidence 32 245999999999988753 678999999999998654
No 181
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.34 E-value=8.3e-12 Score=115.20 Aligned_cols=102 Identities=22% Similarity=0.325 Sum_probs=80.3
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-C-------CCCeEEEEecccCCccccccc
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-T-------NPKLEFVVANIADQNLESIFL 102 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~-------~~~i~~~~~Di~~~~l~~~~~ 102 (433)
.+++.+|||+|||+|..+. .+++..... .+|+++|+|+.+++.|+++. . ..++++.++|+...... .
T Consensus 75 ~~~~~~vLDiG~G~G~~~~-~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~ 149 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTA-CFARMVGCT-GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE---E 149 (226)
T ss_dssp SCTTCEEEEETCTTSHHHH-HHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG---G
T ss_pred CCCCCEEEEEcCCcCHHHH-HHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc---C
Confidence 4678999999999999994 444433221 39999999999999999876 1 35899999998754332 3
Q ss_pred CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 103 AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
++||+|++..+++++ ++++.++|||||.+++....
T Consensus 150 ~~fD~i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 150 APYDAIHVGAAAPVV------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CCEEEEEECSBBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred CCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEec
Confidence 789999999988765 35788999999999997654
No 182
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.33 E-value=6.6e-12 Score=115.64 Aligned_cols=116 Identities=21% Similarity=0.214 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANI 92 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di 92 (433)
....++..++.. .++.+|||||||+|..+ ..++...+.+ .+++++|+++.+++.|++++ + ..+++++++|+
T Consensus 45 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~-~~la~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (223)
T 3duw_A 45 TQGKFLQLLVQI---QGARNILEIGTLGGYST-IWLARGLSSG-GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLA 119 (223)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEECCTTSHHH-HHHHTTCCSS-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred HHHHHHHHHHHh---hCCCEEEEecCCccHHH-HHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 334455544443 46789999999999999 5555555533 49999999999999999887 2 24699999998
Q ss_pred cCCcccccc---cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 93 ADQNLESIF---LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 93 ~~~~l~~~~---~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+. ++... .++||+|++.... ......++++.++|+|||.+++..
T Consensus 120 ~~~-~~~~~~~~~~~fD~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 120 LDS-LQQIENEKYEPFDFIFIDADK---QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHH-HHHHHHTTCCCCSEEEECSCG---GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred HHH-HHHHHhcCCCCcCEEEEcCCc---HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 653 22211 1579999987663 345688999999999999888754
No 183
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.33 E-value=2.7e-12 Score=117.52 Aligned_cols=87 Identities=18% Similarity=0.247 Sum_probs=73.9
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSF 111 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~ 111 (433)
.++.+|||||||+|.++ ..++ .+++|+|+|+. ++++.++|+...+++. ++||+|++.
T Consensus 66 ~~~~~vLDiG~G~G~~~-~~l~-------~~v~~~D~s~~------------~~~~~~~d~~~~~~~~---~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLA-SSIR-------NPVHCFDLASL------------DPRVTVCDMAQVPLED---ESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHH-HHCC-------SCEEEEESSCS------------STTEEESCTTSCSCCT---TCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHH-HHhh-------ccEEEEeCCCC------------CceEEEeccccCCCCC---CCEeEEEEe
Confidence 56789999999999998 4442 38999999987 4678889988765544 789999999
Q ss_pred ccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 112 YCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 112 ~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
.++|+ .+...+++++.++|+|||.+++.+.
T Consensus 123 ~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 123 LSLMG-TNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp SCCCS-SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhccc-cCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 99986 7899999999999999999998754
No 184
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.32 E-value=9.5e-12 Score=114.89 Aligned_cols=104 Identities=18% Similarity=0.281 Sum_probs=81.1
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCC----CCCcEEEEEeCCHHHHHHHHhhc---C-----CCCeEEEEecccCCccc
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLP----KSVVKLVGLDVSPNMIKHAKNHH---T-----NPKLEFVVANIADQNLE 98 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~----~~~~~v~gvDiS~~~l~~A~~~~---~-----~~~i~~~~~Di~~~~l~ 98 (433)
.+++.+|||||||+|..+. .++.... .. .+|+++|+++.+++.|+++. . ..++++..+|+......
T Consensus 78 ~~~~~~VLdiG~G~G~~~~-~la~~~~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTV-CMAIKMNVLENKN-SYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE 155 (227)
T ss_dssp SCTTCEEEEESCTTSHHHH-HHHHHTTTTTCTT-CEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred CCCCCEEEEECCCCCHHHH-HHHHHhcccCCCC-CEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence 4678999999999999994 4444432 11 39999999999999999986 2 46899999998774300
Q ss_pred c-cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 99 S-IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 99 ~-~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
. ...++||+|++..+++++ ++++.++|+|||++++...
T Consensus 156 ~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 156 EKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEE
T ss_pred cCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEc
Confidence 0 113789999999998875 4778999999999998764
No 185
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.32 E-value=7.6e-12 Score=122.66 Aligned_cols=101 Identities=24% Similarity=0.387 Sum_probs=79.9
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCcccccccCcEe
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNLESIFLAKFN 106 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l~~~~~~~fD 106 (433)
..++.+|||||||+|.++. .+++. +..+|+|+|+| .|++.|+++. ...+++++.+|+.+.+++. ++||
T Consensus 36 ~~~~~~VLDiGcGtG~ls~-~la~~---g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~~D 107 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSM-FAAKH---GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPF---PKVD 107 (328)
T ss_dssp HHTTCEEEEETCTTSHHHH-HHHHT---CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSS---SCEE
T ss_pred hcCCCEEEEecCccHHHHH-HHHHC---CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCC---Cccc
Confidence 3578899999999999984 44432 22489999999 5999999886 2257999999998866553 7899
Q ss_pred EEEEccc---ccchhhHHHHHHHHHHhccCCCEEEE
Q psy11646 107 KIFSFYC---LHWVQDQRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 107 ~Vis~~~---l~~~~d~~~~l~~i~~~LkpGG~lll 139 (433)
+|++..+ +++......++.++.++|+|||.++.
T Consensus 108 ~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 108 IIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999854 34445678899999999999999873
No 186
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.32 E-value=9.7e-12 Score=122.92 Aligned_cols=113 Identities=17% Similarity=0.228 Sum_probs=88.2
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccC
Q psy11646 19 AKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIAD 94 (433)
Q Consensus 19 ~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~ 94 (433)
......+.+.+...++.+|||||||+|.++.. +++. +..+|+|+|+|+ +++.|+++. + ..+++++.+|+++
T Consensus 36 ~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~-la~~---g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~ 110 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFF-AAQA---GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE 110 (348)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEETCTTSHHHHH-HHHT---TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHHhccccCCcCEEEEcCCCccHHHHH-HHhC---CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhh
Confidence 34445666666667889999999999999944 4432 224999999996 889998876 2 2679999999988
Q ss_pred CcccccccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEE
Q psy11646 95 QNLESIFLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 95 ~~l~~~~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~ 140 (433)
.+++ ++||+|++..+++|+. +....+.++.++|||||.+++.
T Consensus 111 ~~~~----~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 111 VSLP----EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCCS----SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCCC----CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 6544 6899999998877663 4567888999999999998854
No 187
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.31 E-value=4.6e-13 Score=124.94 Aligned_cols=98 Identities=20% Similarity=0.313 Sum_probs=82.2
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEecccCCcccccccCcEeEE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVANIADQNLESIFLAKFNKI 108 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~Di~~~~l~~~~~~~fD~V 108 (433)
++.+|||+|||+|..+..++. . + .+|+|+|+|+.|++.|++++ +. .+++++++|+.+.+ + .++||+|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~-~---~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~---~~~~D~v 148 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFAL-T---G-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-S---FLKADVV 148 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-G---GCCCSEE
T ss_pred CCCEEEECccccCHHHHHHHH-c---C-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-c---cCCCCEE
Confidence 688999999999999955443 2 2 59999999999999999987 22 47999999998754 2 2799999
Q ss_pred EEcccccchhhHHHHHHHHHHhccCCCEEEE
Q psy11646 109 FSFYCLHWVQDQRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 109 is~~~l~~~~d~~~~l~~i~~~LkpGG~lll 139 (433)
+++.++++..+....+.+++++|+|||.+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 149 FLSPPWGGPDYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp EECCCCSSGGGGGSSSBCTTTSCSSCHHHHH
T ss_pred EECCCcCCcchhhhHHHHHHhhcCCcceeHH
Confidence 9999999988877788899999999998554
No 188
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.29 E-value=1.2e-11 Score=114.77 Aligned_cols=115 Identities=16% Similarity=0.244 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEecc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVANI 92 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~Di 92 (433)
....++..++.. .++.+|||+|||+|..+ ..++...+. .+++++|+++.+++.|++++ +. .++++.++|+
T Consensus 41 ~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~-~~la~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 114 (233)
T 2gpy_A 41 LGMESLLHLLKM---AAPARILEIGTAIGYSA-IRMAQALPE--ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA 114 (233)
T ss_dssp HHHHHHHHHHHH---HCCSEEEEECCTTSHHH-HHHHHHCTT--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG
T ss_pred HHHHHHHHHHhc---cCCCEEEEecCCCcHHH-HHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH
Confidence 344455454443 46789999999999999 455555553 49999999999999999987 22 4699999998
Q ss_pred cCCccccc-ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 93 ADQNLESI-FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 93 ~~~~l~~~-~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
... ++.. ..++||+|++....+ +...+++++.++|+|||.+++..
T Consensus 115 ~~~-~~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 115 LQL-GEKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GGS-HHHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEET
T ss_pred HHH-HHhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEc
Confidence 763 2211 137899999987754 56789999999999999998863
No 189
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.29 E-value=8.9e-12 Score=115.32 Aligned_cols=103 Identities=18% Similarity=0.316 Sum_probs=80.5
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCC----CCcEEEEEeCCHHHHHHHHhhc---C-----CCCeEEEEecccCCccc
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPK----SVVKLVGLDVSPNMIKHAKNHH---T-----NPKLEFVVANIADQNLE 98 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~----~~~~v~gvDiS~~~l~~A~~~~---~-----~~~i~~~~~Di~~~~l~ 98 (433)
.+++.+|||||||+|..+. .+++..+. ...+|+++|+++.+++.|+++. . ..++++..+|+... ++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~-~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~ 159 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTA-CFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG-YP 159 (227)
T ss_dssp CCTTCEEEEESCTTSHHHH-HHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC-CG
T ss_pred CCCCCEEEEECCCccHHHH-HHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC-CC
Confidence 4678899999999999994 44443221 0138999999999999999876 1 36899999998763 32
Q ss_pred ccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
. .++||+|++..+++++. +++.++|||||++++....
T Consensus 160 ~--~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 160 P--NAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp G--GCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred c--CCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 1 26899999999998764 6789999999999987643
No 190
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.28 E-value=1.1e-11 Score=127.43 Aligned_cols=115 Identities=17% Similarity=0.247 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANI 92 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di 92 (433)
....+.+.+++.+...++.+|||||||+|.++. .+++. + ..+|+|+|+|+ +++.|+++. + ..+++++.+|+
T Consensus 142 ~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~-~la~~-~--~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~ 216 (480)
T 3b3j_A 142 RTGTYQRAILQNHTDFKDKIVLDVGCGSGILSF-FAAQA-G--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKV 216 (480)
T ss_dssp HHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHH-HHHHT-T--CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCT
T ss_pred hHHHHHHHHHHhhhhcCCCEEEEecCcccHHHH-HHHHc-C--CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECch
Confidence 345556667776665678899999999999984 44432 2 24999999998 999998876 2 26799999999
Q ss_pred cCCcccccccCcEeEEEEcccccch--hhHHHHHHHHHHhccCCCEEEEE
Q psy11646 93 ADQNLESIFLAKFNKIFSFYCLHWV--QDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 93 ~~~~l~~~~~~~fD~Vis~~~l~~~--~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
.+.+++ ++||+|++..++++. ++....+.++.++|||||.+++.
T Consensus 217 ~~~~~~----~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 217 EEVSLP----EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TTCCCS----SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hhCccC----CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 875443 689999998887766 34566788999999999998853
No 191
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.28 E-value=1.4e-11 Score=117.53 Aligned_cols=121 Identities=16% Similarity=0.241 Sum_probs=91.1
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEecccCCcccc
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVANIADQNLES 99 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~Di~~~~l~~ 99 (433)
.++..+...++.+|||+|||+|.++..++....+. .+++++|+|+.+++.|++++ .. .++++..+|+.+. ++.
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 179 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSS--GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDE 179 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTT--CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSC
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccC
Confidence 45556667789999999999999995444332333 49999999999999999987 22 5789999998765 333
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhh
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLS 155 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~ 155 (433)
++||+|++.. +++..+++++.++|+|||.+++..+...........+.
T Consensus 180 ---~~~D~V~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~ 227 (277)
T 1o54_A 180 ---KDVDALFLDV-----PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQ 227 (277)
T ss_dssp ---CSEEEEEECC-----SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred ---CccCEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 6899999843 45668899999999999999998765444434443333
No 192
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.28 E-value=2.1e-11 Score=115.09 Aligned_cols=104 Identities=19% Similarity=0.318 Sum_probs=80.8
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccccccCcEeEE
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLESIFLAKFNKI 108 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~~~~~~fD~V 108 (433)
.+++.+|||+|||+|.++.. +++. + .+++|+|+++.+++.|+++. ....+++.++|+... ++ .++||+|
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~-la~~---g-~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~---~~~fD~V 188 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIA-AEKL---G-GKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LP---FGPFDLL 188 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHH-HHHT---T-CEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GG---GCCEEEE
T ss_pred cCCCCEEEEecCCCcHHHHH-HHHh---C-CeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-Cc---CCCCCEE
Confidence 36788999999999999844 4432 3 39999999999999999987 211288888887653 33 3789999
Q ss_pred EEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 109 FSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 109 is~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
+++...++ ...++.++.++|+|||.+++.......
T Consensus 189 v~n~~~~~---~~~~l~~~~~~LkpgG~lils~~~~~~ 223 (254)
T 2nxc_A 189 VANLYAEL---HAALAPRYREALVPGGRALLTGILKDR 223 (254)
T ss_dssp EEECCHHH---HHHHHHHHHHHEEEEEEEEEEEEEGGG
T ss_pred EECCcHHH---HHHHHHHHHHHcCCCCEEEEEeeccCC
Confidence 99876554 467899999999999999997654443
No 193
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.28 E-value=2.7e-11 Score=119.89 Aligned_cols=118 Identities=17% Similarity=0.109 Sum_probs=90.6
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcc
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNL 97 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l 97 (433)
+...++....+.++.+|||+|||+|.++..++....+. .+++|+|+++.|++.|++++ +..++++.++|+.+.+.
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~--~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPT--SPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR 268 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTT--SCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCC--ceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc
Confidence 44455666677889999999999999995554422233 48999999999999999987 22379999999988654
Q ss_pred cccccCcEeEEEEcccccch--------hhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 98 ESIFLAKFNKIFSFYCLHWV--------QDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~--------~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+. +.||+|+++.++... .....+++++.++|+|||.+++....
T Consensus 269 ~~---~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 269 FF---PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp TC---CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred cc---CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 43 568999998776432 12367899999999999999987643
No 194
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.28 E-value=2.5e-11 Score=117.10 Aligned_cols=105 Identities=13% Similarity=0.179 Sum_probs=76.9
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--------CCCCeEEEEecccCCcccccccC
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--------TNPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--------~~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
.++.+|||||||+|..+..+++ ..+. .+++++|+++.+++.|++++ ..++++++.+|+... +. ...+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~-~~~~--~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~-l~-~~~~ 156 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTR-HKNV--ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF-VN-QTSQ 156 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHT-CTTC--CEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC-----CCCC
T ss_pred CCCCEEEEEeCChhHHHHHHHh-CCCC--CEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH-Hh-hcCC
Confidence 4578999999999999955544 3332 48999999999999999986 146899999998764 22 1237
Q ss_pred cEeEEEEcccccchhh----HHHHHHHHHHhccCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLHWVQD----QRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d----~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+||+|++.......+. ...++++++++|+|||.+++..
T Consensus 157 ~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 157 TFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 8999999655433222 1678999999999999988754
No 195
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.27 E-value=4.2e-11 Score=118.57 Aligned_cols=113 Identities=21% Similarity=0.355 Sum_probs=91.8
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCccc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~ 98 (433)
...++..+.+.+..+|||||||+|.++ ..+++..|.. +++..|. |.+++.|+++. ...++++..+|+.+.+.
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~~~-~~l~~~~p~~--~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~- 242 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGALA-KECMSLYPGC--KITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL- 242 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSHHH-HHHHHHCSSC--EEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC-
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCHHH-HHHHHhCCCc--eeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC-
Confidence 345666667777889999999999999 4555566654 8899997 88999999887 34789999999876543
Q ss_pred ccccCcEeEEEEcccccchhhH--HHHHHHHHHhccCCCEEEEEecc
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQ--RQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~--~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
..+|+|++..+||+++|. ..+++++++.|+|||++++.+..
T Consensus 243 ----~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 243 ----PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp ----CCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ----CCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 347999999999988765 56799999999999999998743
No 196
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.27 E-value=1.8e-11 Score=119.36 Aligned_cols=113 Identities=19% Similarity=0.213 Sum_probs=84.6
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcE
Q psy11646 29 FKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
+...++.+|||+|||+|..+.. ++...+.. .+|+|+|+|+.+++.++++. +..++++.++|+...+. ..++|
T Consensus 114 l~~~~g~~VLDlg~G~G~~t~~-la~~~~~~-~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~---~~~~f 188 (315)
T 1ixk_A 114 LDPKPGEIVADMAAAPGGKTSY-LAQLMRND-GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE---LNVEF 188 (315)
T ss_dssp HCCCTTCEEEECCSSCSHHHHH-HHHHTTTC-SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG---GCCCE
T ss_pred hCCCCCCEEEEeCCCCCHHHHH-HHHHhCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc---ccccC
Confidence 4557899999999999999944 44444332 49999999999999999987 44579999999877532 23689
Q ss_pred eEEEEccc------ccchh----------------hHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 106 NKIFSFYC------LHWVQ----------------DQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 106 D~Vis~~~------l~~~~----------------d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
|+|++... +++.+ ....+++++.++|||||.+++++.+..+
T Consensus 189 D~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~ 251 (315)
T 1ixk_A 189 DKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP 251 (315)
T ss_dssp EEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG
T ss_pred CEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh
Confidence 99998532 32211 1257899999999999999997755433
No 197
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.27 E-value=1.7e-11 Score=120.49 Aligned_cols=123 Identities=15% Similarity=0.289 Sum_probs=87.6
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC--------------CCCeEEEE
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT--------------NPKLEFVV 89 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~--------------~~~i~~~~ 89 (433)
.++..+...++.+|||+|||+|.++..++....+.+ +++++|+++.+++.|++++. ..++++..
T Consensus 96 ~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 96 MILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQG--RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTC--EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCc--eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 344455567899999999999999944443223334 99999999999999999762 25799999
Q ss_pred ecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhh
Q psy11646 90 ANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKL 154 (433)
Q Consensus 90 ~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~ 154 (433)
+|+.+.. .....++||+|++... ++..++.++.++|+|||.+++..............+
T Consensus 174 ~d~~~~~-~~~~~~~fD~V~~~~~-----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l 232 (336)
T 2b25_A 174 KDISGAT-EDIKSLTFDAVALDML-----NPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGI 232 (336)
T ss_dssp SCTTCCC--------EEEEEECSS-----STTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHH
T ss_pred CChHHcc-cccCCCCeeEEEECCC-----CHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHH
Confidence 9998752 1122368999998644 334478999999999999998876655554444433
No 198
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.27 E-value=3.8e-12 Score=119.45 Aligned_cols=117 Identities=20% Similarity=0.223 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEec
Q psy11646 16 LDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVAN 91 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~D 91 (433)
+....++..++.. .++.+|||||||+|..+ ..++...+.+ .+|+++|+++.+++.|++++ + ..+++++++|
T Consensus 46 ~~~~~~l~~l~~~---~~~~~VLDiG~G~G~~t-~~la~~~~~~-~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 120 (242)
T 3r3h_A 46 PEQAQFMQMLIRL---TRAKKVLELGTFTGYSA-LAMSLALPDD-GQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGP 120 (242)
T ss_dssp HHHHHHHHHHHHH---HTCSEEEEEESCCSHHH-HHHHHTSCTT-CEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESC
T ss_pred HHHHHHHHHHHhh---cCcCEEEEeeCCcCHHH-HHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 3455566665544 35679999999999999 4555555433 59999999999999999887 2 2589999999
Q ss_pred ccCCccccc----ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 92 IADQNLESI----FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 92 i~~~~l~~~----~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+.+. ++.. ..++||+|++... ..+....++++.++|+|||.+++..
T Consensus 121 a~~~-l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 121 ALDT-LHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp HHHH-HHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHH-HHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 8653 2211 1378999998765 3456778999999999999998854
No 199
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.27 E-value=6.9e-12 Score=120.25 Aligned_cols=111 Identities=15% Similarity=0.197 Sum_probs=78.8
Q ss_pred HHHHHHhcCCC-CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEE-EEecccCCcccc
Q psy11646 22 LSQYIDQFKWT-DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEF-VVANIADQNLES 99 (433)
Q Consensus 22 l~~l~~~l~~~-~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~-~~~Di~~~~l~~ 99 (433)
+..++..+... ++.+|||||||||.++..+++ . +..+|+|+|+|+.|++.+.++. +++.. ...++.......
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~-~---ga~~V~aVDvs~~mL~~a~r~~--~rv~~~~~~ni~~l~~~~ 146 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQ-N---GAKLVYAVDVGTNQLVWKLRQD--DRVRSMEQYNFRYAEPVD 146 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHH-T---TCSEEEEECSSSSCSCHHHHTC--TTEEEECSCCGGGCCGGG
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHh-C---CCCEEEEEECCHHHHHHHHHhC--cccceecccCceecchhh
Confidence 45566666655 577999999999999944444 2 2249999999999999865432 34432 233444432222
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+||+|++..+++++ ..++.+++++|+|||.+++..
T Consensus 147 l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 147 FTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp CTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEE
Confidence 222459999998888765 678999999999999998863
No 200
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.27 E-value=1.2e-11 Score=113.06 Aligned_cols=114 Identities=14% Similarity=0.146 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANI 92 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di 92 (433)
....++..+... .++.+|||||||+|..+. .++...+.+ .+++++|+|+.+++.|++++ + ..++++.++|+
T Consensus 43 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~-~la~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 117 (210)
T 3c3p_A 43 QTGRLLYLLARI---KQPQLVVVPGDGLGCASW-WFARAISIS-SRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDP 117 (210)
T ss_dssp HHHHHHHHHHHH---HCCSEEEEESCGGGHHHH-HHHTTSCTT-CEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCH
T ss_pred HHHHHHHHHHHh---hCCCEEEEEcCCccHHHH-HHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecH
Confidence 344555554443 356799999999999994 455454433 59999999999999999886 2 24699999998
Q ss_pred cCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 93 ADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 93 ~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+. ++. ..+ ||+|++... ..+...+++++.++|+|||.+++..
T Consensus 118 ~~~-~~~-~~~-fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 118 LGI-AAG-QRD-IDILFMDCD---VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp HHH-HTT-CCS-EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred HHH-hcc-CCC-CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 653 121 226 999998743 3456789999999999999988753
No 201
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.27 E-value=1.4e-11 Score=115.92 Aligned_cols=117 Identities=14% Similarity=0.180 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEec
Q psy11646 16 LDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVAN 91 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~D 91 (433)
+....++..++.. .++.+|||||||+|..+. .++..++.+ .+++++|+++.+++.|++++ + ..+++++++|
T Consensus 65 ~~~~~ll~~l~~~---~~~~~VLeiG~G~G~~~~-~la~~~~~~-~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd 139 (247)
T 1sui_A 65 ADEGQFLSMLLKL---INAKNTMEIGVYTGYSLL-ATALAIPED-GKILAMDINKENYELGLPVIKKAGVDHKIDFREGP 139 (247)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEEECCGGGHHHH-HHHHHSCTT-CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred HHHHHHHHHHHHh---hCcCEEEEeCCCcCHHHH-HHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 3455566655554 356799999999999994 455555533 59999999999999999987 2 2479999999
Q ss_pred ccCCccccc-----ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 92 IADQNLESI-----FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 92 i~~~~l~~~-----~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+.+. ++.. ..++||+|++... ..+....++++.++|+|||.+++..
T Consensus 140 a~~~-l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 140 ALPV-LDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHHH-HHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred HHHH-HHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 8653 2211 1378999998754 3456788999999999999988753
No 202
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.26 E-value=3.3e-11 Score=112.46 Aligned_cols=119 Identities=18% Similarity=0.285 Sum_probs=90.7
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcccc
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNLES 99 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l~~ 99 (433)
.++..+...++.+|||+|||+|.++..++. . ..+++++|+++.+++.|+++. . ..++++...|+.+...+.
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~-~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 156 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSE-V----AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPE 156 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHH-H----SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCT
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHH-h----CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCC
Confidence 455556667899999999999999955544 3 259999999999999999986 2 267899999987642132
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhh
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLS 155 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~ 155 (433)
++||+|++.. +++..+++++.++|+|||.+++..+......+....+.
T Consensus 157 ---~~~D~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~ 204 (248)
T 2yvl_A 157 ---GIFHAAFVDV-----REPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIE 204 (248)
T ss_dssp ---TCBSEEEECS-----SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHST
T ss_pred ---CcccEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 6899999843 35667899999999999999998765544444444443
No 203
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.26 E-value=1.3e-11 Score=115.23 Aligned_cols=116 Identities=11% Similarity=0.128 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhccc----CCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEec
Q psy11646 16 LDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPN----LPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVAN 91 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~----~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~D 91 (433)
+....++..++... ++.+|||||||+|..+ ..+++. .+. .+|+|+|+|+.|++.|+.. ..+++++++|
T Consensus 67 p~~~~~l~~~l~~~---~~~~VLDiG~GtG~~t-~~la~~~~~~~~~--~~V~gvD~s~~~l~~a~~~--~~~v~~~~gD 138 (236)
T 2bm8_A 67 PDTQAVYHDMLWEL---RPRTIVELGVYNGGSL-AWFRDLTKIMGID--CQVIGIDRDLSRCQIPASD--MENITLHQGD 138 (236)
T ss_dssp HHHHHHHHHHHHHH---CCSEEEEECCTTSHHH-HHHHHHHHHTTCC--CEEEEEESCCTTCCCCGGG--CTTEEEEECC
T ss_pred HHHHHHHHHHHHhc---CCCEEEEEeCCCCHHH-HHHHHhhhhcCCC--CEEEEEeCChHHHHHHhcc--CCceEEEECc
Confidence 55556666666553 4679999999999999 455544 333 4999999999999988743 2689999999
Q ss_pred ccCCc-ccccccCcEeEEEEcccccchhhHHHHHHHHHH-hccCCCEEEEEec
Q psy11646 92 IADQN-LESIFLAKFNKIFSFYCLHWVQDQRQAISNIYN-LLMPGGEVLLLLN 142 (433)
Q Consensus 92 i~~~~-l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~-~LkpGG~lll~~~ 142 (433)
+.+.. ++.....+||+|++... | .+...++.++.+ +|||||++++...
T Consensus 139 ~~~~~~l~~~~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 139 CSDLTTFEHLREMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SSCSGGGGGGSSSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred chhHHHHHhhccCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 98631 11111247999998765 3 267789999997 9999999998643
No 204
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.25 E-value=5.6e-11 Score=116.12 Aligned_cols=105 Identities=17% Similarity=0.226 Sum_probs=79.4
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-------CCCeEEEEecccCCcccccccCc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-------NPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-------~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
.++.+|||||||+|..+..++ +..+. .+++++|+|+.+++.|++++. .+++++.++|+.+. ++ ...++
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~-~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~-l~-~~~~~ 189 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELC-KYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF-LE-NVTNT 189 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHT-TCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH-HH-HCCSC
T ss_pred CCCCEEEEEcCCccHHHHHHH-HcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH-Hh-hcCCC
Confidence 456899999999999995444 43332 599999999999999999872 36899999998653 11 12378
Q ss_pred EeEEEEcccccc--hhhH--HHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHW--VQDQ--RQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~--~~d~--~~~l~~i~~~LkpGG~lll~~ 141 (433)
||+|++...-++ .... ..+++++.++|+|||.+++..
T Consensus 190 fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 190 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999998763222 1222 688999999999999998853
No 205
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.25 E-value=1.1e-11 Score=119.19 Aligned_cols=118 Identities=15% Similarity=0.206 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEe
Q psy11646 15 QLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVA 90 (433)
Q Consensus 15 ~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~ 90 (433)
++.++.+++.+++.+...++.+|||+|||+|..+..+ +.. +. .+++|+|+|+.+++.|+++. +. .++++.++
T Consensus 105 r~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~l-a~~-~~--~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~ 180 (284)
T 1nv8_A 105 RPETEELVELALELIRKYGIKTVADIGTGSGAIGVSV-AKF-SD--AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKG 180 (284)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH-HHH-SS--CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEES
T ss_pred ChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHH-HHC-CC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 4455666666666554346779999999999999544 444 43 49999999999999999987 22 35999999
Q ss_pred cccCCcccccccCcE---eEEEEcccccchh-------------------hHHHHHHHHH-HhccCCCEEEEEe
Q psy11646 91 NIADQNLESIFLAKF---NKIFSFYCLHWVQ-------------------DQRQAISNIY-NLLMPGGEVLLLL 141 (433)
Q Consensus 91 Di~~~~l~~~~~~~f---D~Vis~~~l~~~~-------------------d~~~~l~~i~-~~LkpGG~lll~~ 141 (433)
|+.+. ++ ++| |+|+++....... +...+++++. +.|+|||.+++..
T Consensus 181 D~~~~-~~----~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 181 EFLEP-FK----EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp STTGG-GG----GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred cchhh-cc----cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 98763 32 578 9999985443211 1226789999 9999999998753
No 206
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.25 E-value=9e-11 Score=112.63 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=81.3
Q ss_pred CCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-------CCCeEEEEecccCCccccccc
Q psy11646 30 KWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-------NPKLEFVVANIADQNLESIFL 102 (433)
Q Consensus 30 ~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-------~~~i~~~~~Di~~~~l~~~~~ 102 (433)
.++++.+|||||||+|..+..+ ++..+. .+++++|+++.+++.|++++. .+++++.++|+... ++ ...
T Consensus 75 ~~~~~~~VLdiG~G~G~~~~~l-~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-l~-~~~ 149 (283)
T 2i7c_A 75 VSKEPKNVLVVGGGDGGIIREL-CKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF-LE-NVT 149 (283)
T ss_dssp TSSSCCEEEEEECTTSHHHHHH-TTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH-HH-HCC
T ss_pred cCCCCCeEEEEeCCcCHHHHHH-HHcCCC--CEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH-HH-hCC
Confidence 3456789999999999999544 444332 499999999999999999872 46899999998653 11 114
Q ss_pred CcEeEEEEcccccchh--hH--HHHHHHHHHhccCCCEEEEEe
Q psy11646 103 AKFNKIFSFYCLHWVQ--DQ--RQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~~--d~--~~~l~~i~~~LkpGG~lll~~ 141 (433)
++||+|++....++.+ .. ..++++++++|+|||.+++..
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 150 NTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp SCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 7899999965443322 22 688999999999999998763
No 207
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.25 E-value=3.4e-11 Score=112.97 Aligned_cols=106 Identities=18% Similarity=0.326 Sum_probs=79.0
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-----------CCCCeEEEEecccCCcccc-
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-----------TNPKLEFVVANIADQNLES- 99 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-----------~~~~i~~~~~Di~~~~l~~- 99 (433)
+++.+|||||||+|.++ ..++...+. .+++|+|+|+.+++.|++++ ...++.++++|+.+. ++.
T Consensus 48 ~~~~~vLDiGcG~G~~~-~~la~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~-l~~~ 123 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLM-IDLSPAFPE--DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF-LPNF 123 (246)
T ss_dssp SCCEEEEEETCTTSHHH-HHHHHHSTT--SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC-GGGT
T ss_pred CCCCEEEEEcCCCCHHH-HHHHHhCCC--CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH-HHHh
Confidence 36779999999999999 445555444 38999999999999998764 225899999998763 222
Q ss_pred cccCcEeEEEEcccccchhh--------HHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQD--------QRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d--------~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+++|.|+....-.|... ...++.++.++|+|||.+++..
T Consensus 124 ~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 33478999987654333211 1478999999999999999864
No 208
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.25 E-value=1.4e-11 Score=122.08 Aligned_cols=99 Identities=24% Similarity=0.403 Sum_probs=81.9
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSF 111 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~ 111 (433)
.++.+|||||||+|.++ ..+++..+.. +++++|+ +.+++.|++. .++++..+|+.+ +++ .||+|++.
T Consensus 192 ~~~~~vlDvG~G~G~~~-~~l~~~~p~~--~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~~-----~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVT-KLIHEIFPHL--KCTVFDQ-PQVVGNLTGN---ENLNFVGGDMFK-SIP-----SADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHH-HHHHHHCTTS--EEEEEEC-HHHHSSCCCC---SSEEEEECCTTT-CCC-----CCSEEEEE
T ss_pred cCCCEEEEECCCcCHHH-HHHHHHCCCC--eEEEecc-HHHHhhcccC---CCcEEEeCccCC-CCC-----CceEEEEc
Confidence 46789999999999999 4555555543 8999999 7898877753 569999999876 443 49999999
Q ss_pred ccccchhhHH--HHHHHHHHhccC---CCEEEEEecc
Q psy11646 112 YCLHWVQDQR--QAISNIYNLLMP---GGEVLLLLNA 143 (433)
Q Consensus 112 ~~l~~~~d~~--~~l~~i~~~Lkp---GG~lll~~~~ 143 (433)
.++|++++.. .++++++++|+| ||++++.+..
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 9999998866 999999999999 9999997643
No 209
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=3.6e-11 Score=114.74 Aligned_cols=102 Identities=15% Similarity=0.147 Sum_probs=82.1
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeE
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
..++.+|||+|||+|.++. .+++..+. .+|+|+|+|+.+++.|++++ +..++.++++|+.+.+. .++||+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~-~la~~~~~--~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~----~~~~D~ 189 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTI-PLAKYSKP--KLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL----KDVADR 189 (272)
T ss_dssp CCTTCEEEETTCTTTTTHH-HHHHHTCC--SEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC----TTCEEE
T ss_pred cCCCCEEEEecCcCCHHHH-HHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc----cCCceE
Confidence 4678899999999999994 44444333 49999999999999999987 33578999999987522 378999
Q ss_pred EEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 108 IFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
|++..+. +....+.++.+.|+|||.+++....
T Consensus 190 Vi~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 190 VIMGYVH----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp EEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCcc----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 9998775 4566888999999999999987543
No 210
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.24 E-value=2e-11 Score=116.63 Aligned_cols=115 Identities=17% Similarity=0.145 Sum_probs=85.5
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccc-cccCc
Q psy11646 29 FKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLES-IFLAK 104 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~-~~~~~ 104 (433)
+...++.+|||+|||+|..+.. ++...+.. .+|+++|+|+.+++.++++. +..++++.++|+...+... ...++
T Consensus 79 l~~~~g~~VLDlgaG~G~~t~~-la~~~~~~-~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~ 156 (274)
T 3ajd_A 79 LNPREDDFILDMCAAPGGKTTH-LAQLMKNK-GTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIF 156 (274)
T ss_dssp HCCCTTCEEEETTCTTCHHHHH-HHHHTTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCC
T ss_pred hCCCCcCEEEEeCCCccHHHHH-HHHHcCCC-CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhcccc
Confidence 3457889999999999999944 44444332 49999999999999999987 3458999999987643210 01378
Q ss_pred EeEEEEcccccc------------------hhhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 105 FNKIFSFYCLHW------------------VQDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 105 fD~Vis~~~l~~------------------~~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
||+|++...... ......+++++.++|||||.+++++.+..
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 999999743321 13457889999999999999999875543
No 211
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.24 E-value=4.5e-12 Score=112.39 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=78.6
Q ss_pred hcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeE
Q psy11646 28 QFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
.+..++|.+|||||||. +++|+|+.|++.|+++.. .++++.++|+++.++....+++||+
T Consensus 7 ~~g~~~g~~vL~~~~g~-------------------v~vD~s~~ml~~a~~~~~-~~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS-------------------SPVEALKGLVDKLQALTG-NEGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTTCCTTSEEEEEECTT-------------------SCHHHHHHHHHHHHHHTT-TTSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred ccCCCCCCEEEEecCCc-------------------eeeeCCHHHHHHHHHhcc-cCcEEEEechhcCccccCCCCCEeE
Confidence 34567899999999985 128999999999999863 2599999999886541123489999
Q ss_pred EEEcccccch-hhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 108 IFSFYCLHWV-QDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 108 Vis~~~l~~~-~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
|+++.++||+ ++...++++++++|||||++++..
T Consensus 67 V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 67 ILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 9999999999 899999999999999999999853
No 212
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.24 E-value=7.6e-11 Score=114.85 Aligned_cols=104 Identities=20% Similarity=0.238 Sum_probs=81.0
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC--------CCCeEEEEecccCCcccccccC
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT--------NPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~--------~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
+++.+|||||||+|..+..+ ++..+. .+++++|+++.+++.|++++. .++++++.+|+... ++ ...+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l-~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~-l~-~~~~ 150 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREV-LKHPTV--EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY-LE-RTEE 150 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHH-TTSTTC--CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH-HH-HCCC
T ss_pred CCCCeEEEEcCCcCHHHHHH-HhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH-HH-hcCC
Confidence 45689999999999999544 444332 499999999999999998861 46899999998763 21 1237
Q ss_pred cEeEEEEcccccc---hh--h--HHHHHHHHHHhccCCCEEEEE
Q psy11646 104 KFNKIFSFYCLHW---VQ--D--QRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 104 ~fD~Vis~~~l~~---~~--d--~~~~l~~i~~~LkpGG~lll~ 140 (433)
+||+|++....++ .+ . ...++++++++|+|||.+++.
T Consensus 151 ~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 151 RYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp CEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred CccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 8999999877665 21 1 368899999999999999875
No 213
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.24 E-value=3.4e-11 Score=112.48 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEec
Q psy11646 16 LDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVAN 91 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~D 91 (433)
+....++..++.. .++.+|||||||+|..+. .++...+.+ .+++++|+++.+++.|++++ +. .+++++++|
T Consensus 56 ~~~~~~l~~l~~~---~~~~~VLeiG~G~G~~~~-~la~~~~~~-~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 130 (237)
T 3c3y_A 56 PLAGQLMSFVLKL---VNAKKTIEVGVFTGYSLL-LTALSIPDD-GKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD 130 (237)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEEECCTTSHHHH-HHHHHSCTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred HHHHHHHHHHHHh---hCCCEEEEeCCCCCHHHH-HHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 3445566665554 456799999999999994 445555533 59999999999999999887 22 469999999
Q ss_pred ccCCccccc-----ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 92 IADQNLESI-----FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 92 i~~~~l~~~-----~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+.+. ++.. ..++||+|++... ..+....++++.++|+|||.+++..
T Consensus 131 a~~~-l~~l~~~~~~~~~fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 131 AMLA-LDNLLQGQESEGSYDFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HHHH-HHHHHHSTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHH-HHHHHhccCCCCCcCEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 8653 2211 1378999998643 3456788999999999999988753
No 214
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.23 E-value=4.1e-11 Score=110.65 Aligned_cols=115 Identities=18% Similarity=0.241 Sum_probs=85.0
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEeccc
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIA 93 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~ 93 (433)
...++..+... .++.+|||||||+|..+. .++...+.+ .+++++|+++.+++.|++++ + ..++++.++|+.
T Consensus 57 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~-~la~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 131 (229)
T 2avd_A 57 QAQLLANLARL---IQAKKALDLGTFTGYSAL-ALALALPAD-GRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL 131 (229)
T ss_dssp HHHHHHHHHHH---TTCCEEEEECCTTSHHHH-HHHTTSCTT-CEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHHh---cCCCEEEEEcCCccHHHH-HHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHH
Confidence 33455444443 467899999999999994 455444433 59999999999999999987 2 258999999986
Q ss_pred CCccccccc----CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 94 DQNLESIFL----AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 94 ~~~l~~~~~----~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+. ++.... ++||+|++... ..+....++++.++|+|||.+++..
T Consensus 132 ~~-~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 132 ET-LDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp HH-HHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH-HHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 53 222111 68999999765 2345778999999999999988854
No 215
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.23 E-value=3.7e-11 Score=111.76 Aligned_cols=117 Identities=22% Similarity=0.250 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEec
Q psy11646 16 LDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVAN 91 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~D 91 (433)
+....++..++.. .++.+|||||||+|..+ ..++...+.+ .+++++|+++.+++.|++++ + ..++++.++|
T Consensus 58 ~~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~-~~la~~~~~~-~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d 132 (232)
T 3cbg_A 58 PEQAQFLGLLISL---TGAKQVLEIGVFRGYSA-LAMALQLPPD-GQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGP 132 (232)
T ss_dssp HHHHHHHHHHHHH---HTCCEEEEECCTTSHHH-HHHHTTSCTT-CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC
T ss_pred HHHHHHHHHHHHh---cCCCEEEEecCCCCHHH-HHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 3444555555543 35679999999999999 4555555433 59999999999999999886 2 2469999999
Q ss_pred ccCCcccccc--c--CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 92 IADQNLESIF--L--AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 92 i~~~~l~~~~--~--~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+.+. ++... . ++||+|++... ..+....++++.++|+|||.+++..
T Consensus 133 ~~~~-l~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 133 ALAT-LEQLTQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp HHHH-HHHHHTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred HHHH-HHHHHhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 7542 22211 2 68999998765 3456788999999999999998864
No 216
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.22 E-value=7.9e-11 Score=112.66 Aligned_cols=100 Identities=13% Similarity=0.157 Sum_probs=79.9
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcccccccCcEeE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
+++.+|||+|||+|.++..++. ... .+|+|+|+|+.+++.|++++ + ..++++.++|+.+... .++||+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~-~~~---~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~----~~~fD~ 195 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAV-YGK---AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----ENIADR 195 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHH-HTC---CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC----CSCEEE
T ss_pred CCCCEEEEecccCCHHHHHHHH-hCC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc----cCCccE
Confidence 5789999999999999954443 321 27999999999999999987 2 2358999999987643 378999
Q ss_pred EEEcccccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 108 IFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
|++.... +...++.++.++|+|||.+++....
T Consensus 196 Vi~~~p~----~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 196 ILMGYVV----RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCch----hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 9997653 3356788999999999999997655
No 217
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.22 E-value=3.5e-11 Score=112.22 Aligned_cols=115 Identities=17% Similarity=0.201 Sum_probs=84.8
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEeccc
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVANIA 93 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~Di~ 93 (433)
...++..++.. .++.+|||||||+|..+ ..+++..+.+ .+++++|+++.+++.|++++ +. .++++.++|+.
T Consensus 48 ~~~~l~~l~~~---~~~~~VLdiG~G~G~~~-~~la~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 122 (239)
T 2hnk_A 48 EGQFLNILTKI---SGAKRIIEIGTFTGYSS-LCFASALPED-GKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSAL 122 (239)
T ss_dssp HHHHHHHHHHH---HTCSEEEEECCTTCHHH-HHHHHHSCTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHh---hCcCEEEEEeCCCCHHH-HHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 33444444433 46789999999999999 4555555433 59999999999999999986 22 35899999976
Q ss_pred CCccccc-------------c-c-CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 94 DQNLESI-------------F-L-AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 94 ~~~l~~~-------------~-~-~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+. ++.. . . ++||+|++.... ++....++++.++|+|||.+++..
T Consensus 123 ~~-~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 123 ET-LQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HH-HHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH-HHHHHhhcccccccccccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 52 1211 1 1 689999998653 455688999999999999999864
No 218
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.22 E-value=6e-11 Score=116.42 Aligned_cols=106 Identities=14% Similarity=0.259 Sum_probs=80.5
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-------CCCeEEEEecccCCcccccccC
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-------NPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-------~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
..++.+|||||||+|..+.. +++..+. .+|+++|+|+.+++.|++++. .++++++++|+... ++....+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~-la~~~~~--~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~-l~~~~~~ 193 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLRE-VARHASI--EQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF-LKNAAEG 193 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHH-HTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH-HHTSCTT
T ss_pred CCCCCEEEEECCCccHHHHH-HHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH-HHhccCC
Confidence 45678999999999999944 4444333 499999999999999999871 36899999998653 2211237
Q ss_pred cEeEEEEccc--ccchhh--HHHHHHHHHHhccCCCEEEEE
Q psy11646 104 KFNKIFSFYC--LHWVQD--QRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 104 ~fD~Vis~~~--l~~~~d--~~~~l~~i~~~LkpGG~lll~ 140 (433)
+||+|++... .+...+ ...+++++.++|+|||.+++.
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 8999999654 222222 368999999999999999885
No 219
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.21 E-value=1.4e-10 Score=111.97 Aligned_cols=105 Identities=21% Similarity=0.206 Sum_probs=77.2
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-------CCCeEEEEecccCCcccccccCc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-------NPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-------~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
..+.+|||||||+|..+..+ ++..+. .+++++|+++.+++.|++++. .++++++++|+... ++ ...++
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l-~~~~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-l~-~~~~~ 163 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREV-LKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY-VR-KFKNE 163 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHH-TTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-GG-GCSSC
T ss_pred CCCCEEEEEcCCcCHHHHHH-HhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-Hh-hCCCC
Confidence 45689999999999999544 443332 499999999999999999861 46899999997653 11 12378
Q ss_pred EeEEEEcccccchh-----hHHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQ-----DQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~-----d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
||+|++....++.. ....++++++++|+|||.+++..
T Consensus 164 fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 164 FDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999865433221 12678999999999999998853
No 220
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.21 E-value=1.5e-10 Score=110.58 Aligned_cols=105 Identities=18% Similarity=0.192 Sum_probs=79.5
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-------CCCCeEEEEecccCCcccccccCc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-------TNPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-------~~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
..+.+|||||||+|..+..++ +..+. .+++++|+++.+++.|++++ ..++++++.+|+... ++. ..++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~-~~~~~--~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~-l~~-~~~~ 148 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREIL-KHPSV--KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH-IAK-SENQ 148 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHT-TCTTC--SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH-HHT-CCSC
T ss_pred CCCCEEEEECCchHHHHHHHH-hCCCC--ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-Hhh-CCCC
Confidence 457899999999999995444 33222 49999999999999999976 246899999998653 221 2378
Q ss_pred EeEEEEcccccchhh----HHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQD----QRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~d----~~~~l~~i~~~LkpGG~lll~~ 141 (433)
||+|++....++.+. ...++++++++|+|||.+++..
T Consensus 149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999999665433211 2578999999999999988753
No 221
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.20 E-value=4.5e-11 Score=118.81 Aligned_cols=99 Identities=18% Similarity=0.270 Sum_probs=78.0
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCcccccccCcEeE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
.++.+|||||||+|.++ .++++. +..+|+|+|.|+ |++.|++.. ...+|+++.+|+++..++ ++||+
T Consensus 82 ~~~k~VLDvG~GtGiLs-~~Aa~a---GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp----e~~Dv 152 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILS-IFCAQA---GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP----EQVDA 152 (376)
T ss_dssp HTTCEEEEETCTTSHHH-HHHHHT---TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SCEEE
T ss_pred cCCCEEEEeCCCccHHH-HHHHHh---CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC----ccccE
Confidence 36889999999999988 454432 325899999996 888888876 346799999999987665 78999
Q ss_pred EEEc---ccccchhhHHHHHHHHHHhccCCCEEEE
Q psy11646 108 IFSF---YCLHWVQDQRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 108 Vis~---~~l~~~~d~~~~l~~i~~~LkpGG~lll 139 (433)
|++- ..+.+-.....++....++|+|||.++-
T Consensus 153 ivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 153 IVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp EECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred EEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 9984 3444445677888888999999998764
No 222
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.19 E-value=2.2e-10 Score=103.54 Aligned_cols=101 Identities=21% Similarity=0.281 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL 97 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l 97 (433)
+..++..+. .....++.+|||+|||+|.++..+ +.. +..+++|+|+|+.+++.|+++.. ++++.++|+.+.
T Consensus 37 ~~~l~~~~~-~~~~~~~~~vlD~gcG~G~~~~~l-~~~---~~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~d~~~~-- 107 (200)
T 1ne2_A 37 AAYFLIEIY-NDGNIGGRSVIDAGTGNGILACGS-YLL---GAESVTAFDIDPDAIETAKRNCG--GVNFMVADVSEI-- 107 (200)
T ss_dssp HHHHHHHHH-HHTSSBTSEEEEETCTTCHHHHHH-HHT---TBSEEEEEESCHHHHHHHHHHCT--TSEEEECCGGGC--
T ss_pred HHHHHHHHH-hcCCCCCCEEEEEeCCccHHHHHH-HHc---CCCEEEEEECCHHHHHHHHHhcC--CCEEEECcHHHC--
Confidence 444443333 234457889999999999998444 432 22489999999999999999874 899999998874
Q ss_pred cccccCcEeEEEEcccccchhh--HHHHHHHHHHhc
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQD--QRQAISNIYNLL 131 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d--~~~~l~~i~~~L 131 (433)
+ ++||+|+++.++|+..+ ....++++.+.+
T Consensus 108 ~----~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 108 S----GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp C----CCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred C----CCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 2 68999999999998864 346788888888
No 223
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.19 E-value=4.8e-11 Score=111.15 Aligned_cols=161 Identities=16% Similarity=0.253 Sum_probs=91.8
Q ss_pred HHHHHHhcCCC-CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEE-EecccCCcccc
Q psy11646 22 LSQYIDQFKWT-DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFV-VANIADQNLES 99 (433)
Q Consensus 22 l~~l~~~l~~~-~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~-~~Di~~~~l~~ 99 (433)
++.++..+... ++.+|||||||+|.++..++. . +..+|+|+|+|+.|++.|+++. .++... ..++.......
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~-~---g~~~V~gvDis~~ml~~a~~~~--~~~~~~~~~~~~~~~~~~ 98 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQ-N---GAKLVYALDVGTNQLAWKIRSD--ERVVVMEQFNFRNAVLAD 98 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHH-T---TCSEEEEECSSCCCCCHHHHTC--TTEEEECSCCGGGCCGGG
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHh-c---CCCEEEEEcCCHHHHHHHHHhC--ccccccccceEEEeCHhH
Confidence 44556666554 477999999999999954443 2 2249999999999999988764 222211 11221111011
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeeccccCceE
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLLFTGVIQ 179 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~pl~gv~~ 179 (433)
.....||.+.+..++..+ ..++++++++|||||.+++.. .|.++ ..|..+... |+
T Consensus 99 ~~~~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~---~p~~e--------~~~~~~~~~---------G~-- 153 (232)
T 3opn_A 99 FEQGRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI---KPQFE--------AGREQVGKN---------GI-- 153 (232)
T ss_dssp CCSCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE---CHHHH--------SCHHHHC-C---------CC--
T ss_pred cCcCCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE---Ccccc--------cCHHHhCcC---------Ce--
Confidence 111124444444444333 678999999999999998864 23222 112111100 00
Q ss_pred EEccccccchHHHHHHhcCCCCCeEEEecCCCCC
Q psy11646 180 VQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDV 213 (433)
Q Consensus 180 iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~ 213 (433)
+........+.+++...+...++.++-.+..|-.
T Consensus 154 ~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~ 187 (232)
T 3opn_A 154 IRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIK 187 (232)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSC
T ss_pred ecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCC
Confidence 0000111236677778888888888777766643
No 224
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.18 E-value=3.8e-11 Score=126.34 Aligned_cols=104 Identities=19% Similarity=0.305 Sum_probs=80.7
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-C--CCCeEEEEecccCCcccccccCcEeEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-T--NPKLEFVVANIADQNLESIFLAKFNKI 108 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~--~~~i~~~~~Di~~~~l~~~~~~~fD~V 108 (433)
..+.+|||||||.|.++ ..+++ .| .+|+|+|.|+.+++.|+.++ . ..+++|.++++++.. ....+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~-~~la~---~g-a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFS-LSLAS---KG-ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVI-AALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHH-HHHHH---TT-CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHH-HHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHH-HHHHh---CC-CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHh-hhccCCCccEE
Confidence 35789999999999999 55553 23 69999999999999999887 2 247899999998741 11234789999
Q ss_pred EEcccccchhhHHH--HHHHHHHhccCCCEEEEEe
Q psy11646 109 FSFYCLHWVQDQRQ--AISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 109 is~~~l~~~~d~~~--~l~~i~~~LkpGG~lll~~ 141 (433)
+|..++||++++.. .+..+.+.|+++|..++..
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 99999999988653 3556777788887666543
No 225
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.17 E-value=9.4e-11 Score=113.64 Aligned_cols=105 Identities=13% Similarity=0.178 Sum_probs=80.2
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC---CCCeEEEEecccCCcccccccCcEeEEEE
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT---NPKLEFVVANIADQNLESIFLAKFNKIFS 110 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~---~~~i~~~~~Di~~~~l~~~~~~~fD~Vis 110 (433)
..+|||||||+|..+ ..+++..+.. +++++|+++.+++.|++++. .++++++++|.... +.....++||+|++
T Consensus 90 ~~rVLdIG~G~G~la-~~la~~~p~~--~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~-l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGGACTMA-RYFADVYPQS--RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMV-AESFTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCGGGHHH-HHHHHHSTTC--EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHH-HHTCCTTCEEEEEE
T ss_pred CCEEEEEECCcCHHH-HHHHHHCCCc--EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHH-HhhccCCCCCEEEE
Confidence 359999999999999 4555444543 89999999999999999982 46899999998764 22222378999999
Q ss_pred cccccch-h-h--HHHHHHHHHHhccCCCEEEEEec
Q psy11646 111 FYCLHWV-Q-D--QRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 111 ~~~l~~~-~-d--~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
....++. . . ...++++++++|+|||.+++...
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 6543321 1 1 26789999999999999987653
No 226
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.16 E-value=1.7e-10 Score=113.22 Aligned_cols=105 Identities=12% Similarity=0.067 Sum_probs=80.5
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCC--CeEEEEecccCCccccc--ccCc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNP--KLEFVVANIADQNLESI--FLAK 104 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~--~i~~~~~Di~~~~l~~~--~~~~ 104 (433)
.++.+|||+|||+|.++..++. .+ .+|+++|+|+.+++.|++++ ... +++++++|+.+.. ... ..++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~----~g-a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l-~~~~~~~~~ 225 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAA----AG-AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI-QREERRGST 225 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHH----TT-CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH-HHHHHHTCC
T ss_pred CCCCcEEEcccccCHHHHHHHH----cC-CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHH-HHHHhcCCC
Confidence 4678999999999999955544 23 49999999999999999987 222 4899999987642 111 1368
Q ss_pred EeEEEEccc----------ccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 105 FNKIFSFYC----------LHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 105 fD~Vis~~~----------l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
||+|++... +++..+...+++++.++|+|||.+++...
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred ceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 999999554 23455678899999999999999777653
No 227
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.14 E-value=1.4e-10 Score=111.12 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=78.9
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-------------CCCCeEEEEecccCCccc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-------------TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-------------~~~~i~~~~~Di~~~~l~ 98 (433)
.++.+|||||||+|..+..+++ . +. .+++++|+++.+++.|++++ ..++++++.+|+.+. +.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~-~-~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~-l~ 148 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQ-H-DV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF-IK 148 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTT-S-CC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH-HH
T ss_pred CCCCeEEEEcCCcCHHHHHHHh-C-CC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH-hc
Confidence 4578999999999999954443 3 43 49999999999999999987 246799999997653 22
Q ss_pred ccccCcEeEEEEcccccchh--h--HHHHHHHHHHhccCCCEEEEEe
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQ--D--QRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~--d--~~~~l~~i~~~LkpGG~lll~~ 141 (433)
. .++||+|++....++.. . ...++++++++|+|||.+++..
T Consensus 149 ~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 149 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 1 37899999976643321 1 2678999999999999998763
No 228
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.13 E-value=2.3e-10 Score=116.95 Aligned_cols=115 Identities=20% Similarity=0.221 Sum_probs=85.4
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcE
Q psy11646 29 FKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
+...++.+|||+|||+|..+.. ++...+.. .+++++|+|+.+++.++++. +..++++.++|+...+ +....++|
T Consensus 255 l~~~~g~~VLDlgaG~G~~t~~-la~~~~~~-~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~-~~~~~~~f 331 (450)
T 2yxl_A 255 LDPKPGETVVDLAAAPGGKTTH-LAELMKNK-GKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP-EIIGEEVA 331 (450)
T ss_dssp HCCCTTCEEEESSCTTCHHHHH-HHHHTTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS-SSSCSSCE
T ss_pred cCCCCcCEEEEeCCCccHHHHH-HHHHcCCC-CEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc-hhhccCCC
Confidence 3457889999999999999944 44444432 49999999999999999887 4457999999987653 11222689
Q ss_pred eEEEEc------ccccchhh----------------HHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 106 NKIFSF------YCLHWVQD----------------QRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 106 D~Vis~------~~l~~~~d----------------~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
|+|++. .++++.++ +..++.++.++|||||.+++++.+..+
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 999973 23332222 157899999999999999988765543
No 229
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.13 E-value=2.6e-10 Score=105.51 Aligned_cols=111 Identities=16% Similarity=0.060 Sum_probs=82.8
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNL 97 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l 97 (433)
|..+...+ +++.+|||||||+|.++ ..++...+. .+|+++|+++.+++.|+++. + ..++++.++|..+...
T Consensus 12 L~~i~~~v--~~g~~VlDIGtGsG~l~-i~la~~~~~--~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~ 86 (230)
T 3lec_A 12 LQKVANYV--PKGARLLDVGSDHAYLP-IFLLQMGYC--DFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE 86 (230)
T ss_dssp HHHHHTTS--CTTEEEEEETCSTTHHH-HHHHHTTCE--EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC
T ss_pred HHHHHHhC--CCCCEEEEECCchHHHH-HHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc
Confidence 44444444 57889999999999999 444544333 48999999999999999998 2 3579999999876532
Q ss_pred cccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
+. +.||+|+..+..- .-....+.+..+.|+++|++++.-.
T Consensus 87 ~~---~~~D~IviaGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 87 EA---DNIDTITICGMGG--RLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp GG---GCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred cc---cccCEEEEeCCch--HHHHHHHHHHHHHhCcCCEEEEECC
Confidence 21 3799988766543 2256678888899999999988753
No 230
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.12 E-value=4.2e-10 Score=103.94 Aligned_cols=111 Identities=14% Similarity=0.044 Sum_probs=82.2
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNL 97 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l 97 (433)
|..+.+.+ +++.+|||||||+|.++ ..++...+. .+|+++|+++.+++.|+++. + ..++++..+|..+. +
T Consensus 6 L~~l~~~v--~~g~~VlDIGtGsG~l~-i~la~~~~~--~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~-l 79 (225)
T 3kr9_A 6 LELVASFV--SQGAILLDVGSDHAYLP-IELVERGQI--KSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA-F 79 (225)
T ss_dssp HHHHHTTS--CTTEEEEEETCSTTHHH-HHHHHTTSE--EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-C
T ss_pred HHHHHHhC--CCCCEEEEeCCCcHHHH-HHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh-c
Confidence 44444444 57889999999999999 445544443 48999999999999999988 2 24699999998543 3
Q ss_pred cccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
+. .+.||+|+..+.-. .-....+.+..+.|+|+|++++.-.
T Consensus 80 ~~--~~~~D~IviaG~Gg--~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 80 EE--TDQVSVITIAGMGG--RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp CG--GGCCCEEEEEEECH--HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred cc--CcCCCEEEEcCCCh--HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 32 13699998766532 2256788899999999999988654
No 231
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.12 E-value=6.6e-10 Score=110.74 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=80.4
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNKI 108 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~V 108 (433)
.++.+|||+| |+|.++. .++...+. .+++|+|+|+.|++.|+++. +..+++++++|+... ++....++||+|
T Consensus 171 ~~~~~VLDlG-G~G~~~~-~la~~~~~--~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~-l~~~~~~~fD~V 245 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSI-ALMLSGLP--KRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKP-LPDYALHKFDTF 245 (373)
T ss_dssp STTCEEEEES-CTTCHHH-HHHHHTCC--SEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSC-CCTTTSSCBSEE
T ss_pred CCCCEEEEEC-CCCHHHH-HHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhh-chhhccCCccEE
Confidence 3688999999 9999994 44544333 39999999999999999987 333899999999872 221123689999
Q ss_pred EEcccccchhhHHHHHHHHHHhccCCCEE-EEEe
Q psy11646 109 FSFYCLHWVQDQRQAISNIYNLLMPGGEV-LLLL 141 (433)
Q Consensus 109 is~~~l~~~~d~~~~l~~i~~~LkpGG~l-ll~~ 141 (433)
+++.+++... ...+++++.++|+|||.+ ++..
T Consensus 246 i~~~p~~~~~-~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 246 ITDPPETLEA-IRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp EECCCSSHHH-HHHHHHHHHHTBCSTTCEEEEEE
T ss_pred EECCCCchHH-HHHHHHHHHHHcccCCeEEEEEE
Confidence 9998876554 578899999999999954 4444
No 232
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.12 E-value=1.4e-10 Score=112.87 Aligned_cols=105 Identities=18% Similarity=0.181 Sum_probs=76.6
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-------CCCeEEEEecccCCcccccccCc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-------NPKLEFVVANIADQNLESIFLAK 104 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-------~~~i~~~~~Di~~~~l~~~~~~~ 104 (433)
..+.+|||||||+|..+..+ ++..+. .+++++|+++.+++.|++++. .++++++.+|+... ++. ..++
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l-~~~~~~--~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~-l~~-~~~~ 181 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREV-LKHESV--EKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF-LKN-HKNE 181 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHH-TTCTTC--CEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH-HHH-CTTC
T ss_pred CCCCEEEEEcCCcCHHHHHH-HHcCCC--CEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH-HHh-cCCC
Confidence 45689999999999999544 444333 499999999999999999872 46799999998653 221 2378
Q ss_pred EeEEEEcccccchhh--H--HHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQD--Q--RQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~d--~--~~~l~~i~~~LkpGG~lll~~ 141 (433)
||+|++....+..+. . ..++++++++|+|||.+++..
T Consensus 182 fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 182 FDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 999998664332221 1 678999999999999998753
No 233
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.12 E-value=1.6e-10 Score=111.94 Aligned_cols=107 Identities=15% Similarity=0.124 Sum_probs=78.6
Q ss_pred CCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-C------CCCeEEEEecccCCccccccc
Q psy11646 30 KWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-T------NPKLEFVVANIADQNLESIFL 102 (433)
Q Consensus 30 ~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~------~~~i~~~~~Di~~~~l~~~~~ 102 (433)
.+..+.+|||||||+|..+..+ ++..+. .+++++|+++.+++.|++++ . .++++++.+|+... ++ ...
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l-~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~-l~-~~~ 166 (304)
T 2o07_A 92 SHPNPRKVLIIGGGDGGVLREV-VKHPSV--ESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF-MK-QNQ 166 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHH-TTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-HH-TCS
T ss_pred hCCCCCEEEEECCCchHHHHHH-HHcCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH-Hh-hCC
Confidence 3456789999999999999544 443332 49999999999999999986 1 47899999998652 11 123
Q ss_pred CcEeEEEEcccccchh----hHHHHHHHHHHhccCCCEEEEEe
Q psy11646 103 AKFNKIFSFYCLHWVQ----DQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~~----d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
++||+|++....++.+ ....+++++.++|+|||.+++..
T Consensus 167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 7899999976543321 12468999999999999998754
No 234
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.11 E-value=4.9e-10 Score=107.55 Aligned_cols=109 Identities=21% Similarity=0.363 Sum_probs=81.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC----CCCeEEEEecccCC
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT----NPKLEFVVANIADQ 95 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~----~~~i~~~~~Di~~~ 95 (433)
.++..+++.+...++.+|||||||+|.++..++. . + .+|+|+|+++.|++.|+++.. ..+++++++|+...
T Consensus 15 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~-~---~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 15 LIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLE-K---A-KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHH-H---S-SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHh-h---C-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 4555666777777889999999999999955443 2 2 499999999999999999872 15799999999875
Q ss_pred cccccccCcEeEEEEcccccchhhHH-HHH--------------HHH--HHhccCCCEEE
Q psy11646 96 NLESIFLAKFNKIFSFYCLHWVQDQR-QAI--------------SNI--YNLLMPGGEVL 138 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~l~~~~d~~-~~l--------------~~i--~~~LkpGG~ll 138 (433)
++ .+||+|+++.++++..... .++ +++ +++++|||.++
T Consensus 90 ~~-----~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DL-----PFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CC-----CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cc-----hhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 43 3699999998887765432 222 222 36889999763
No 235
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.11 E-value=3.4e-10 Score=113.34 Aligned_cols=108 Identities=13% Similarity=0.109 Sum_probs=81.1
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCC--CeEEEEecccCCccccc--ccCc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNP--KLEFVVANIADQNLESI--FLAK 104 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~--~i~~~~~Di~~~~l~~~--~~~~ 104 (433)
.++.+|||+|||+|.++..++. .+..+|+|+|+|+.+++.|++++ +.. +++++++|+.+. ++.. ...+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~----~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~-l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAM----GGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDY-FKYARRHHLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHH----TTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHH-HHHHHHTTCC
T ss_pred cCCCeEEEEeeccCHHHHHHHH----CCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH-HHHHHHhCCC
Confidence 4678999999999999955543 23248999999999999999987 223 899999998763 2211 1358
Q ss_pred EeEEEEccccc---------chhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 105 FNKIFSFYCLH---------WVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 105 fD~Vis~~~l~---------~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
||+|++..... ...+...++..+.++|+|||.+++.....
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99999965442 22345667888899999999998876543
No 236
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.10 E-value=3.7e-10 Score=105.37 Aligned_cols=111 Identities=14% Similarity=0.063 Sum_probs=82.2
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcc
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNL 97 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l 97 (433)
|..+.+.+ +++.+|||||||+|.++ ..++...+. .+++++|+++.+++.|++++ + ..++++.++|..+...
T Consensus 12 L~~i~~~v--~~g~~VlDIGtGsG~l~-i~la~~~~~--~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 12 LEKVASYI--TKNERIADIGSDHAYLP-CFAVKNQTA--SFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHHHHTTC--CSSEEEEEETCSTTHHH-HHHHHTTSE--EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC
T ss_pred HHHHHHhC--CCCCEEEEECCccHHHH-HHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC
Confidence 44444444 57889999999999999 445544333 48999999999999999997 2 2469999999876432
Q ss_pred cccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 98 ESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
+. ++||+|++.+.-- .-....+.+..+.|+++|++++.-.
T Consensus 87 ~~---~~~D~IviagmGg--~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 87 KK---DAIDTIVIAGMGG--TLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp GG---GCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred cc---ccccEEEEeCCch--HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 21 3599998765533 2245678888999999999998753
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.10 E-value=3.8e-10 Score=104.36 Aligned_cols=98 Identities=11% Similarity=0.111 Sum_probs=79.6
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccccccCcEeEEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLESIFLAKFNKIF 109 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~~~~~~fD~Vi 109 (433)
.++.+|||||||.|-++..++ +. .+|+|+|+++.|++.++++. ...+..+.+.|....+++ ++||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~--~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~----~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GI--ASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA----EAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TC--SEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC----CBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cC--CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC----CCcchHH
Confidence 567899999999999984443 33 49999999999999999997 446788999998876555 7899999
Q ss_pred EcccccchhhH-HHHHHHHHHhccCCCEEEE
Q psy11646 110 SFYCLHWVQDQ-RQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 110 s~~~l~~~~d~-~~~l~~i~~~LkpGG~lll 139 (433)
++-++|++++. ....-++.+.|+++|.++-
T Consensus 174 llk~lh~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 174 IFKLLPLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp EESCHHHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred HHHHHHHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 99999999754 3344488999999976554
No 238
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.09 E-value=2.2e-10 Score=116.85 Aligned_cols=113 Identities=20% Similarity=0.242 Sum_probs=83.4
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcE
Q psy11646 29 FKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
+...++.+|||+|||+|..+. .++...+.. .+|+++|+|+.+++.+++++ +.. +.+.++|+.... ....++|
T Consensus 97 L~~~~g~~VLDlgaGpG~kt~-~LA~~~~~~-g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~--~~~~~~F 171 (464)
T 3m6w_A 97 LDPKPGERVLDLAAAPGGKTT-HLAARMGGK-GLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALA--EAFGTYF 171 (464)
T ss_dssp HCCCTTCEEEESSCTTCHHHH-HHHHHTTTC-SEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHH--HHHCSCE
T ss_pred cCcCCCCEEEEEcCCcCHHHH-HHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhh--hhccccC
Confidence 345789999999999999994 444444433 49999999999999999987 344 888888876632 2224789
Q ss_pred eEEEEcccc------cchh----------------hHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 106 NKIFSFYCL------HWVQ----------------DQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 106 D~Vis~~~l------~~~~----------------d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
|+|++.... ...+ .+..++.++.++|||||+++.++.+..+
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 999974322 1111 1367899999999999999988765443
No 239
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.08 E-value=3.9e-10 Score=115.80 Aligned_cols=110 Identities=16% Similarity=0.219 Sum_probs=82.2
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcEeEEE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKFNKIF 109 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~fD~Vi 109 (433)
++.+|||+|||+|..+.. ++...+.. .+|+++|+|+.+++.+++++ +..++.+.++|+...+. ...++||.|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~-lA~~~~~~-g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~--~~~~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQ-ISARMNNE-GAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA--AVPEMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHH-HHHHTTTC-SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH--HSTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHH-HHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh--hccccCCEEE
Confidence 889999999999999944 44444332 49999999999999999987 44679999999876421 1237899999
Q ss_pred Eccc------ccchh----------------hHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 110 SFYC------LHWVQ----------------DQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 110 s~~~------l~~~~----------------d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
+... +...+ .+..++.++.++|||||+++.++.+..+
T Consensus 193 ~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~ 251 (479)
T 2frx_A 193 LDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQ 251 (479)
T ss_dssp EECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSS
T ss_pred ECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCc
Confidence 8422 21111 1356799999999999999998765443
No 240
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.08 E-value=2.1e-09 Score=97.40 Aligned_cols=108 Identities=12% Similarity=0.178 Sum_probs=78.9
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC--CCCeEEEEecccCC
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT--NPKLEFVVANIADQ 95 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~--~~~i~~~~~Di~~~ 95 (433)
+..++. .+......++.+|||+|||+|.++..++. . +..+++|+|+|+.+++.|+++.. ..++++.++|+.+.
T Consensus 35 ~~~l~~-~~~~~~~~~~~~vlD~g~G~G~~~~~l~~-~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 109 (207)
T 1wy7_A 35 ASELLW-LAYSLGDIEGKVVADLGAGTGVLSYGALL-L---GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF 109 (207)
T ss_dssp HHHHHH-HHHHTTSSTTCEEEEETCTTCHHHHHHHH-T---TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC
T ss_pred HHHHHH-HHHHcCCCCcCEEEEeeCCCCHHHHHHHH-c---CCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc
Confidence 334443 33333445788999999999999954443 2 22389999999999999999872 12799999998774
Q ss_pred cccccccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEE
Q psy11646 96 NLESIFLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVL 138 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~ll 138 (433)
+ ++||+|+++.++++.. .....++++.+++ ||.++
T Consensus 110 --~----~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 110 --N----SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp --C----CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred --C----CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEE
Confidence 2 5899999999988764 3456788888888 55443
No 241
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.08 E-value=3.1e-10 Score=105.89 Aligned_cols=101 Identities=11% Similarity=0.204 Sum_probs=81.0
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccccccCcEeEEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLESIFLAKFNKIF 109 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~~~~~~fD~Vi 109 (433)
.+..+|||||||+|-++ ..+....+. .+|+++|+++.|++.+++++ ...+..+.+.|....+.+ +.||+++
T Consensus 131 ~~p~~VLDLGCG~GpLA-l~~~~~~p~--a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~----~~~DvaL 203 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLA-APWMGLPAE--TVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLD----EPADVTL 203 (281)
T ss_dssp CCCSEEEETTCTTGGGC-CTTTTCCTT--CEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCC----SCCSEEE
T ss_pred CCCceeeeeccCccHHH-HHHHhhCCC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCC----CCcchHH
Confidence 45779999999999998 444444344 49999999999999999998 345678888898765444 8899999
Q ss_pred EcccccchhhHH--HHHHHHHHhccCCCEEEEE
Q psy11646 110 SFYCLHWVQDQR--QAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 110 s~~~l~~~~d~~--~~l~~i~~~LkpGG~lll~ 140 (433)
++-++|++++.. ..+ ++.+.|+|+|.++-.
T Consensus 204 ~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 204 LLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp ETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEE
T ss_pred HHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEec
Confidence 999999997653 345 999999999976643
No 242
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.08 E-value=2.7e-10 Score=115.98 Aligned_cols=114 Identities=18% Similarity=0.190 Sum_probs=84.3
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcE
Q psy11646 29 FKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
+...++.+|||+|||+|..+..++ ...+.. .+|+++|+|+.+++.+++++ +..++.+.+.|..... ....++|
T Consensus 101 L~~~~g~~VLDlcaGpGgkt~~lA-~~~~~~-g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~--~~~~~~F 176 (456)
T 3m4x_A 101 AAAKPGEKVLDLCAAPGGKSTQLA-AQMKGK-GLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV--PHFSGFF 176 (456)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHH-HHHTTC-SEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH--HHHTTCE
T ss_pred cCCCCCCEEEEECCCcCHHHHHHH-HHcCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh--hhccccC
Confidence 345789999999999999995444 333332 49999999999999999987 4567889888886632 2224789
Q ss_pred eEEEEcccc------cch----------------hhHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 106 NKIFSFYCL------HWV----------------QDQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 106 D~Vis~~~l------~~~----------------~d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
|+|++.... ..- ..+...+.++.++|||||.++.++.+..+
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 999985542 111 11237799999999999999988765544
No 243
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.07 E-value=5.2e-10 Score=113.61 Aligned_cols=114 Identities=18% Similarity=0.260 Sum_probs=84.0
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccccccCcEe
Q psy11646 29 FKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLESIFLAKFN 106 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~~~~~~fD 106 (433)
+...++.+|||+|||+|..+. .++...+. .+++++|+++.+++.+++++ ...++++.++|+...+ .....++||
T Consensus 242 l~~~~g~~VLDlgaG~G~~t~-~la~~~~~--~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~-~~~~~~~fD 317 (429)
T 1sqg_A 242 LAPQNGEHILDLCAAPGGKTT-HILEVAPE--AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS-QWCGEQQFD 317 (429)
T ss_dssp HCCCTTCEEEEESCTTCHHHH-HHHHHCTT--CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTH-HHHTTCCEE
T ss_pred cCCCCcCeEEEECCCchHHHH-HHHHHcCC--CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhch-hhcccCCCC
Confidence 345789999999999999994 44545444 49999999999999999987 2335789999987643 112236899
Q ss_pred EEEEcc------cccchhh----------------HHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 107 KIFSFY------CLHWVQD----------------QRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 107 ~Vis~~------~l~~~~d----------------~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
+|++.. ++++.++ +...+.++.++|||||.+++++.+..+
T Consensus 318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 999743 2222222 247799999999999999998755443
No 244
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.06 E-value=7.1e-10 Score=110.54 Aligned_cols=104 Identities=15% Similarity=0.190 Sum_probs=78.1
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEecccCCcccccccCcEe
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVANIADQNLESIFLAKFN 106 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~Di~~~~l~~~~~~~fD 106 (433)
+.++.+|||+|||+|.++..++ ...+. .+++|+|+|+.|++.|++++ +. .++++.++|+.+.+.+. ++||
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a-~~~~~--~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~---~~fD 288 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELA-LRRYS--GEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYV---DSVD 288 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHH-HTTCC--SCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTC---SCEE
T ss_pred cCCCCEEEEccCcCcHHHHHHH-HhCCC--CeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCccc---CCcC
Confidence 5788999999999999995444 33332 28999999999999999987 22 47999999998865443 7899
Q ss_pred EEEEcccccc-------hhh-HHHHHHHHHHhccCCCEEEEEec
Q psy11646 107 KIFSFYCLHW-------VQD-QRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 107 ~Vis~~~l~~-------~~d-~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
+|+++.++.. +.+ ...+++.+.++| ||.+++...
T Consensus 289 ~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 289 FAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp EEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred EEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 9999877543 222 256788888988 555555443
No 245
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.05 E-value=6.9e-10 Score=111.22 Aligned_cols=107 Identities=13% Similarity=0.098 Sum_probs=78.7
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcccccccCcEeEEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNLESIFLAKFNKIF 109 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~~~~~~fD~Vi 109 (433)
+++.+|||+|||+|.++..++. .+ ..|+++|+|+.+++.|++++ ..-...+.++|+.+. ++.. .+.||+|+
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~----~g-a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~-l~~~-~~~fD~Ii 285 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAAR----KG-AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPT-LRGL-EGPFHHVL 285 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHH----TT-CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHH-HHTC-CCCEEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHH----cC-CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHH-HHHh-cCCCCEEE
Confidence 4689999999999999955544 23 46999999999999999987 112235678887653 2211 24599999
Q ss_pred Ecccccc---------hhhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 110 SFYCLHW---------VQDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 110 s~~~l~~---------~~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
+...... ..+...++..+.++|+|||.+++......
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 9766422 24556789999999999999987765444
No 246
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.04 E-value=3.9e-10 Score=106.89 Aligned_cols=94 Identities=12% Similarity=0.132 Sum_probs=76.1
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-------CCCeEEEEecccCCcccccccC
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-------NPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-------~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
+..+.+|||||||+|..+..+++ . + . +++++|+++.+++.|++++. .+++++..+|..... +
T Consensus 70 ~~~~~~VL~iG~G~G~~~~~ll~-~-~-~--~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------~ 138 (262)
T 2cmg_A 70 KKELKEVLIVDGFDLELAHQLFK-Y-D-T--HIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------K 138 (262)
T ss_dssp SSCCCEEEEESSCCHHHHHHHTT-S-S-C--EEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC------C
T ss_pred CCCCCEEEEEeCCcCHHHHHHHh-C-C-C--EEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH------h
Confidence 34568999999999999955554 3 3 4 99999999999999998762 367999988987642 6
Q ss_pred cEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 104 KFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
+||+|++.. .++..+++++.++|+|||.+++.
T Consensus 139 ~fD~Ii~d~-----~dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 139 KYDLIFCLQ-----EPDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp CEEEEEESS-----CCCHHHHHHHHTTEEEEEEEEEE
T ss_pred hCCEEEECC-----CChHHHHHHHHHhcCCCcEEEEE
Confidence 799999863 34556899999999999999875
No 247
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.03 E-value=7.5e-10 Score=109.10 Aligned_cols=121 Identities=18% Similarity=0.225 Sum_probs=86.2
Q ss_pred HHHHHHHHHHhc-CCCCCCEEEEECCCCChhHHHHhcccCCC--CCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecc
Q psy11646 18 AAKLLSQYIDQF-KWTDNESVLDVGCGPGNVTSKLLLPNLPK--SVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANI 92 (433)
Q Consensus 18 ~~~ll~~l~~~l-~~~~~~~VLDIGcG~G~~~~~~l~~~~~~--~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di 92 (433)
...++..++..+ ...++.+|||+|||+|.++..++...... ...+++|+|+++.+++.|+.+. ...++.+.++|.
T Consensus 114 i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~ 193 (344)
T 2f8l_A 114 IGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDG 193 (344)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCT
T ss_pred HHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCC
Confidence 334444454443 33467899999999999985554432111 0148999999999999999986 122688999997
Q ss_pred cCCcccccccCcEeEEEEcccccchhhH------------------HHHHHHHHHhccCCCEEEEEec
Q psy11646 93 ADQNLESIFLAKFNKIFSFYCLHWVQDQ------------------RQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 93 ~~~~l~~~~~~~fD~Vis~~~l~~~~d~------------------~~~l~~i~~~LkpGG~lll~~~ 142 (433)
.... . .++||+|+++.++++.+.. ...+..+.+.|+|||++++..+
T Consensus 194 l~~~-~---~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 194 LANL-L---VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp TSCC-C---CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCcc-c---cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 6532 2 3789999999987665321 2578999999999999988764
No 248
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.01 E-value=1.8e-09 Score=108.45 Aligned_cols=108 Identities=20% Similarity=0.175 Sum_probs=82.8
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC-C-CeEEEEecccCCccccc--ccCc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN-P-KLEFVVANIADQNLESI--FLAK 104 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~-~-~i~~~~~Di~~~~l~~~--~~~~ 104 (433)
.++.+|||+|||+|.++..++. . +..+|+|+|+|+.+++.|++++ +. . +++++++|+.+. ++.. ..++
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~-~---g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~-~~~~~~~~~~ 293 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALM-G---GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKL-LRTYRDRGEK 293 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHH-T---TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHH-HHHHHHTTCC
T ss_pred hCCCeEEEeeccCCHHHHHHHH-C---CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH-HHHHHhcCCC
Confidence 4688999999999999955443 2 2248999999999999999987 22 3 789999998764 2211 1368
Q ss_pred EeEEEEccccc---------chhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 105 FNKIFSFYCLH---------WVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 105 fD~Vis~~~l~---------~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
||+|++..... ........+.++.++|+|||.+++.....
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99999976542 22567788999999999999999876543
No 249
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.01 E-value=2e-09 Score=103.95 Aligned_cols=89 Identities=26% Similarity=0.396 Sum_probs=66.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQN 96 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~ 96 (433)
.+++.+++.+...++.+|||||||+|.++. .++.. + .+|+|+|+++.+++.|+++. ...+++++++|+...+
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~-~La~~---~-~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTV-KLLPL---A-KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHH-HHTTT---S-SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHH-HHHhc---C-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC
Confidence 345555666666788999999999999994 44432 2 59999999999999999886 3368999999998754
Q ss_pred ccccccCcEeEEEEcccccchh
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQ 118 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~ 118 (433)
+ ++||+|+++..+++..
T Consensus 104 ~-----~~~D~Vv~n~py~~~~ 120 (299)
T 2h1r_A 104 F-----PKFDVCTANIPYKISS 120 (299)
T ss_dssp C-----CCCSEEEEECCGGGHH
T ss_pred c-----ccCCEEEEcCCccccc
Confidence 3 4799999998887654
No 250
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.00 E-value=1.6e-09 Score=116.46 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=82.6
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC--CCeEEEEecccCCcccccccCcEeE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN--PKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~--~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
++.+|||+|||+|.++..++. .+..+|+++|+|+.+++.|++++ +. .+++++++|+.+. ++ ...++||+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~----~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~-l~-~~~~~fD~ 612 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGL----GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW-LR-EANEQFDL 612 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHH----TTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHH-HH-HCCCCEEE
T ss_pred CCCcEEEeeechhHHHHHHHH----CCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHH-HH-hcCCCccE
Confidence 688999999999999955544 23247999999999999999987 22 4799999998763 22 12378999
Q ss_pred EEEccc-----------ccchhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 108 IFSFYC-----------LHWVQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 108 Vis~~~-----------l~~~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
|++... ++...+....+..+.++|+|||.+++....
T Consensus 613 Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 613 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 999664 344466788899999999999999987644
No 251
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.00 E-value=1.8e-09 Score=101.27 Aligned_cols=102 Identities=12% Similarity=0.267 Sum_probs=71.6
Q ss_pred hhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CC
Q psy11646 4 ATLYETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TN 82 (433)
Q Consensus 4 a~~Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~ 82 (433)
...|.+....+. .+++.+++.+...++.+|||||||+|.++..++. . + .+++|+|+|+.|++.|+++. ..
T Consensus 5 ~k~~gQ~fl~d~----~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~-~---~-~~v~~vD~~~~~~~~a~~~~~~~ 75 (244)
T 1qam_A 5 NIKHSQNFITSK----HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQ-R---C-NFVTAIEIDHKLCKTTENKLVDH 75 (244)
T ss_dssp -----CCBCCCH----HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHH-H---S-SEEEEECSCHHHHHHHHHHTTTC
T ss_pred CccCCccccCCH----HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHH-c---C-CeEEEEECCHHHHHHHHHhhccC
Confidence 345555444444 4455667777777889999999999999955543 2 2 49999999999999999987 34
Q ss_pred CCeEEEEecccCCcccccccCcEeEEEEcccccch
Q psy11646 83 PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWV 117 (433)
Q Consensus 83 ~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~ 117 (433)
.+++++++|+.+.+++. ...| .|+++..++..
T Consensus 76 ~~v~~~~~D~~~~~~~~--~~~~-~vv~nlPy~~~ 107 (244)
T 1qam_A 76 DNFQVLNKDILQFKFPK--NQSY-KIFGNIPYNIS 107 (244)
T ss_dssp CSEEEECCCGGGCCCCS--SCCC-EEEEECCGGGH
T ss_pred CCeEEEEChHHhCCccc--CCCe-EEEEeCCcccC
Confidence 68999999998865542 1345 57777766543
No 252
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.98 E-value=1.3e-09 Score=109.37 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=82.5
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCC-CeEEEEecccCCccccc--ccCcE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNP-KLEFVVANIADQNLESI--FLAKF 105 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~-~i~~~~~Di~~~~l~~~--~~~~f 105 (433)
+++.+|||+|||+|.++..++. . +..+|+|+|+|+.+++.|++++ +.. ++++.++|+.+.. +.. ..++|
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~-~---g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~-~~~~~~~~~f 290 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAI-A---GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEM-EKLQKKGEKF 290 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHH-T---TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH-HHHHHTTCCE
T ss_pred hCCCeEEEecCCCCHHHHHHHH-C---CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHH-HHHHhhCCCC
Confidence 4788999999999999955543 2 2248999999999999999987 222 7999999987642 211 13689
Q ss_pred eEEEEccccc---------chhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 106 NKIFSFYCLH---------WVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 106 D~Vis~~~l~---------~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
|+|++..... +..+....+.++.++|+|||.+++.....
T Consensus 291 D~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 9999975442 22456788999999999999988876544
No 253
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.97 E-value=5.1e-09 Score=106.37 Aligned_cols=117 Identities=18% Similarity=0.254 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEec
Q psy11646 15 QLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVAN 91 (433)
Q Consensus 15 ~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~D 91 (433)
+..++.+++.+++.+...++.+|||+|||+|.++.. ++.. ..+|+|+|+|+.+++.|++++ +..+++|.++|
T Consensus 268 ~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~-la~~----~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d 342 (433)
T 1uwv_A 268 AGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLP-LATQ----AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHEN 342 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHH-HHTT----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred HHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHH-HHhh----CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECC
Confidence 556777888888887777888999999999999944 4432 259999999999999999987 33589999999
Q ss_pred ccCCcccc--cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 92 IADQNLES--IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 92 i~~~~l~~--~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+.+. ++. ...++||+|++........ .+++.+. .++|++.++++.
T Consensus 343 ~~~~-l~~~~~~~~~fD~Vv~dPPr~g~~---~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 343 LEED-VTKQPWAKNGFDKVLLDPARAGAA---GVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp TTSC-CSSSGGGTTCCSEEEECCCTTCCH---HHHHHHH-HHCCSEEEEEES
T ss_pred HHHH-hhhhhhhcCCCCEEEECCCCccHH---HHHHHHH-hcCCCeEEEEEC
Confidence 9773 221 2336899999987765543 3444444 378888777653
No 254
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.94 E-value=2.2e-09 Score=107.33 Aligned_cols=107 Identities=19% Similarity=0.166 Sum_probs=82.2
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCccccc--ccCcEeE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESI--FLAKFNK 107 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~--~~~~fD~ 107 (433)
++.+|||+|||+|.++..++. . ..+|+|+|+|+.+++.|++++ +..++++.++|+.+. ++.. ..++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~-~----~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~-~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLAL-G----FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL-LRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHH-H----EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH-HHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHH-h----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHH-HHHHHhcCCCeeE
Confidence 678999999999999955543 2 258999999999999999987 334599999998764 2211 1368999
Q ss_pred EEEccccc---------chhhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 108 IFSFYCLH---------WVQDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 108 Vis~~~l~---------~~~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
|++..... ...+....+.++.++|+|||.+++......
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 99965432 224567789999999999999998865443
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.94 E-value=2.5e-09 Score=102.95 Aligned_cols=91 Identities=18% Similarity=0.314 Sum_probs=74.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~ 98 (433)
.++..+++.+...++.+|||||||+|.++..++. . + .+|+++|+++.|++.+++++ ...+++++++|+.+.+++
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~-~---~-~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAK-N---A-KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHH-H---S-SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGG
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHh-c---C-CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcc
Confidence 4566677777778899999999999999954443 3 2 49999999999999999987 456899999999887665
Q ss_pred ccccCcEeEEEEcccccchh
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQ 118 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~ 118 (433)
. ..||.|+++..++...
T Consensus 112 ~---~~fD~Iv~NlPy~is~ 128 (295)
T 3gru_A 112 K---LDFNKVVANLPYQISS 128 (295)
T ss_dssp G---SCCSEEEEECCGGGHH
T ss_pred c---CCccEEEEeCcccccH
Confidence 4 6799999998877653
No 256
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.93 E-value=4.7e-09 Score=98.99 Aligned_cols=91 Identities=10% Similarity=0.222 Sum_probs=70.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~ 98 (433)
.++..+++.+...++.+|||||||+|.++. .++.. + .+|+++|+++.|++.+++++ ...+++++++|+.+.+++
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-~La~~---~-~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTD-YLLTE---C-DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHH-HHTTT---S-SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHH-HHHHh---C-CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH
Confidence 344556666677789999999999999994 44432 2 59999999999999999987 346899999999987766
Q ss_pred ccc-cCcEeEEEEcccccc
Q psy11646 99 SIF-LAKFNKIFSFYCLHW 116 (433)
Q Consensus 99 ~~~-~~~fD~Vis~~~l~~ 116 (433)
+.. .++|| |+++..++.
T Consensus 91 ~~~~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLPYNI 108 (255)
T ss_dssp GSCCSSCEE-EEEECCHHH
T ss_pred HhccCCCeE-EEecCCccc
Confidence 422 35788 778777653
No 257
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.92 E-value=1.1e-10 Score=109.39 Aligned_cols=128 Identities=20% Similarity=0.305 Sum_probs=87.0
Q ss_pred CCchhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc
Q psy11646 1 MHKATLYETNNSMQQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH 80 (433)
Q Consensus 1 m~~a~~Y~~~~~~~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~ 80 (433)
|.....|.+....+. .+++.+++.+...++.+|||||||+|.++..++. . + .+++|+|+|+.+++.|+++.
T Consensus 1 ~~~~k~~gq~fl~~~----~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~-~---~-~~v~~id~~~~~~~~a~~~~ 71 (245)
T 1yub_A 1 MNKNIKYSQNFLTSE----KVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAK-I---S-KQVTSIELDSHLFNLSSEKL 71 (245)
T ss_dssp CCCCCCSCCCBCCCT----TTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHH-H---S-SEEEESSSSCSSSSSSSCTT
T ss_pred CCCCcccCCCCCCCH----HHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHH-h---C-CeEEEEECCHHHHHHHHHHh
Confidence 334445555433333 3344556666667889999999999999944443 3 2 49999999999999998876
Q ss_pred -CCCCeEEEEecccCCcccccccCcEeEEEEcccccchhh-----------HHHHH----HHHHHhccCCCEEEEE
Q psy11646 81 -TNPKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQD-----------QRQAI----SNIYNLLMPGGEVLLL 140 (433)
Q Consensus 81 -~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d-----------~~~~l----~~i~~~LkpGG~lll~ 140 (433)
...+++++++|+.+.+++. .++| .|+++...+.... ....+ +.+.++|+|||.+.+.
T Consensus 72 ~~~~~v~~~~~D~~~~~~~~--~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 72 KLNTRVTLIHQDILQFQFPN--KQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp TTCSEEEECCSCCTTTTCCC--SSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred ccCCceEEEECChhhcCccc--CCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 3467999999998765431 2578 7788765543211 11223 5588899999876654
No 258
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.92 E-value=2.2e-09 Score=108.23 Aligned_cols=112 Identities=17% Similarity=0.252 Sum_probs=81.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES 99 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~ 99 (433)
.+.+.+++.+...++.+|||+|||+|.++..++....+. .+++|+|+++.+++.| .++++.++|+.....
T Consensus 26 ~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~--~~i~gvDi~~~~~~~a------~~~~~~~~D~~~~~~-- 95 (421)
T 2ih2_A 26 EVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTA--YRFVGVEIDPKALDLP------PWAEGILADFLLWEP-- 95 (421)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSC--SEEEEEESCTTTCCCC------TTEEEEESCGGGCCC--
T ss_pred HHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCC--CeEEEEECCHHHHHhC------CCCcEEeCChhhcCc--
Confidence 445555666654567799999999999995444332122 4999999999998766 478999999876532
Q ss_pred cccCcEeEEEEcccccch-----------hhH------------------HHHHHHHHHhccCCCEEEEEecc
Q psy11646 100 IFLAKFNKIFSFYCLHWV-----------QDQ------------------RQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~-----------~d~------------------~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.++||+|+++..+... ++. ..++..+.++|+|||.+++..+.
T Consensus 96 --~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 96 --GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp --SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred --cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 2689999998655322 111 14588999999999999988754
No 259
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.92 E-value=2.4e-09 Score=102.02 Aligned_cols=98 Identities=13% Similarity=0.172 Sum_probs=76.7
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCcccccccCcEeE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
++|.+|||+|||+|.++..++. . +..+|+++|++|.+++.+++++ ...++++..+|..+... . +.||.
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~-~---g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~---~~~D~ 195 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAV-Y---GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-E---NIADR 195 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHH-H---TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-C---SCEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHH-h---cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-c---cCCCE
Confidence 6899999999999999955543 2 2248999999999999999988 23579999999877532 2 78999
Q ss_pred EEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 108 IFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
|+++..... ...+..+.++|+|||.+.+..
T Consensus 196 Vi~~~p~~~----~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 196 ILMGYVVRT----HEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp EEECCCSSG----GGGHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCcH----HHHHHHHHHHcCCCCEEEEEe
Confidence 998865432 345666778999999887654
No 260
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.90 E-value=4.8e-09 Score=103.04 Aligned_cols=98 Identities=16% Similarity=0.241 Sum_probs=78.3
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcccccccCcEeE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
.++.+|||+|||+|.++.. +. . ..+|+|+|+|+.+++.|++++ + ..++++.++|+.+.. ++||+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~--a~--~--~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------~~fD~ 261 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA--CK--N--AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------VKGNR 261 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH--TT--T--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC------CCEEE
T ss_pred CCCCEEEEccCccCHHHHh--cc--C--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc------CCCcE
Confidence 4788999999999999954 32 2 359999999999999999987 2 257999999987653 68999
Q ss_pred EEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 108 IFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
|++...... ..++..+.++|+|||.+++......
T Consensus 262 Vi~dpP~~~----~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 262 VIMNLPKFA----HKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp EEECCTTTG----GGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred EEECCcHhH----HHHHHHHHHHcCCCCEEEEEEeecC
Confidence 999754332 3678889999999999988765443
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.84 E-value=3.9e-09 Score=107.62 Aligned_cols=119 Identities=17% Similarity=0.174 Sum_probs=86.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCC----------CCcEEEEEeCCHHHHHHHHhhc---CCC--C
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPK----------SVVKLVGLDVSPNMIKHAKNHH---TNP--K 84 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~----------~~~~v~gvDiS~~~l~~A~~~~---~~~--~ 84 (433)
.+...+++.+...++.+|||.|||+|.++..+....... ...+++|+|+++.+++.|+.+. +.. +
T Consensus 158 ~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 158 PLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 344455555566678899999999999985554322100 0137999999999999999876 222 6
Q ss_pred eEEEEecccCCcccccccCcEeEEEEcccccchhh-----------------HHHHHHHHHHhccCCCEEEEEec
Q psy11646 85 LEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQD-----------------QRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 85 i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d-----------------~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
+.+.++|....+.. ++||+|+++.++..... ....+..+.++|+|||++.++.+
T Consensus 238 ~~i~~gD~l~~~~~----~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 238 SPIVCEDSLEKEPS----TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CSEEECCTTTSCCS----SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEeeCCCCCCccc----CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 78889997654322 58999999988765321 13678999999999999988764
No 262
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.84 E-value=9.2e-09 Score=97.78 Aligned_cols=91 Identities=13% Similarity=0.158 Sum_probs=72.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES 99 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~ 99 (433)
.+++.+++.+...++ +|||||||+|.++..++. . + .+|+|+|+++.|++.+++++...+++++++|+...++++
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~-~---~-~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLE-A---G-AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEE 107 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHH-T---T-CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGG
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHH-c---C-CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhh
Confidence 455566677777788 999999999999955544 2 2 489999999999999999985568999999998876553
Q ss_pred cccCcEeEEEEcccccchh
Q psy11646 100 IFLAKFNKIFSFYCLHWVQ 118 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~ 118 (433)
. ..+|.|+++..++...
T Consensus 108 ~--~~~~~iv~NlPy~iss 124 (271)
T 3fut_A 108 V--PQGSLLVANLPYHIAT 124 (271)
T ss_dssp S--CTTEEEEEEECSSCCH
T ss_pred c--cCccEEEecCcccccH
Confidence 1 2589999998877543
No 263
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.84 E-value=1.7e-08 Score=100.92 Aligned_cols=119 Identities=18% Similarity=0.248 Sum_probs=88.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCC-----------------------------------CCCcEEE
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLP-----------------------------------KSVVKLV 64 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~-----------------------------------~~~~~v~ 64 (433)
.+...++....+.++.+|||+|||+|.++..++..... ....+++
T Consensus 182 ~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 182 TLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 45556677778888999999999999998665432211 0013799
Q ss_pred EEeCCHHHHHHHHhhc---CC-CCeEEEEecccCCcccccccCcEeEEEEccccc-ch---hhHHHHHHHHHHhccC--C
Q psy11646 65 GLDVSPNMIKHAKNHH---TN-PKLEFVVANIADQNLESIFLAKFNKIFSFYCLH-WV---QDQRQAISNIYNLLMP--G 134 (433)
Q Consensus 65 gvDiS~~~l~~A~~~~---~~-~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~-~~---~d~~~~l~~i~~~Lkp--G 134 (433)
|+|+++.|++.|++++ +. ..+++.+.|+.+.+.+ ++||+|+++..+. .+ .+...+.+.+.+.|++ |
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~----~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g 337 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE----DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKN 337 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS----CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBS
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC----CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCC
Confidence 9999999999999987 22 3799999999876433 6899999998864 22 2455677778888876 8
Q ss_pred CEEEEEec
Q psy11646 135 GEVLLLLN 142 (433)
Q Consensus 135 G~lll~~~ 142 (433)
|.+++...
T Consensus 338 ~~~~iit~ 345 (385)
T 3ldu_A 338 WSYYLITS 345 (385)
T ss_dssp CEEEEEES
T ss_pred CEEEEEEC
Confidence 88777653
No 264
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.84 E-value=1.1e-08 Score=101.65 Aligned_cols=120 Identities=13% Similarity=0.110 Sum_probs=84.0
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEe
Q psy11646 14 QQLDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVA 90 (433)
Q Consensus 14 ~~~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~ 90 (433)
....+..++..+++.+... +.+|||+|||+|.++. .+++. ..+|+|+|+|+.+++.|++++ +..+++|..+
T Consensus 195 n~~~~~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l-~la~~----~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~ 268 (369)
T 3bt7_A 195 NAAMNIQMLEWALDVTKGS-KGDLLELYCGNGNFSL-ALARN----FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRM 268 (369)
T ss_dssp BHHHHHHHHHHHHHHTTTC-CSEEEEESCTTSHHHH-HHGGG----SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred CHHHHHHHHHHHHHHhhcC-CCEEEEccCCCCHHHH-HHHhc----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 3344566666777666543 5789999999999995 45432 248999999999999999987 3358999999
Q ss_pred cccCCccccccc--------------CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 91 NIADQNLESIFL--------------AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 91 Di~~~~l~~~~~--------------~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
|+.+. ++.... .+||+|++...-.. +..++.+.|+++|.++........
T Consensus 269 d~~~~-~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g------~~~~~~~~l~~~g~ivyvsc~p~t 331 (369)
T 3bt7_A 269 AAEEF-TQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG------LDSETEKMVQAYPRILYISCNPET 331 (369)
T ss_dssp CSHHH-HHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC------CCHHHHHHHTTSSEEEEEESCHHH
T ss_pred CHHHH-HHHHhhccccccccccccccCCCCEEEECcCccc------cHHHHHHHHhCCCEEEEEECCHHH
Confidence 98763 111111 37999998765332 234566777899988877554433
No 265
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.83 E-value=2.7e-08 Score=99.68 Aligned_cols=119 Identities=16% Similarity=0.241 Sum_probs=86.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCC--C---------------------------------CCcEEE
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLP--K---------------------------------SVVKLV 64 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~--~---------------------------------~~~~v~ 64 (433)
.+...++....+.++.+|||.+||+|.+++.++..... + ...+++
T Consensus 188 ~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 267 (393)
T 3k0b_A 188 TMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNII 267 (393)
T ss_dssp HHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEE
Confidence 44555667778888999999999999998555432211 1 013699
Q ss_pred EEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcccccccCcEeEEEEccccc-ch---hhHHHHHHHHHHhccC--C
Q psy11646 65 GLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNLESIFLAKFNKIFSFYCLH-WV---QDQRQAISNIYNLLMP--G 134 (433)
Q Consensus 65 gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~-~~---~d~~~~l~~i~~~Lkp--G 134 (433)
|+|+++.|++.|++++ + ..++++.++|+.+.+.+ .+||+|+++..+. .+ .+...+.+.+.+.||+ |
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~----~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE----DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC----CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC----CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCC
Confidence 9999999999999987 2 24699999999886433 6899999998764 22 2345566777777775 8
Q ss_pred CEEEEEec
Q psy11646 135 GEVLLLLN 142 (433)
Q Consensus 135 G~lll~~~ 142 (433)
|.+++...
T Consensus 344 ~~~~iit~ 351 (393)
T 3k0b_A 344 WSVYVLTS 351 (393)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 88887653
No 266
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.82 E-value=3.9e-08 Score=98.14 Aligned_cols=119 Identities=13% Similarity=0.190 Sum_probs=88.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCC--C---------------------------------CCcEEE
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLP--K---------------------------------SVVKLV 64 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~--~---------------------------------~~~~v~ 64 (433)
.+...++....+.++..|||.+||+|.+++.++..... . ...+++
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 44555677777888999999999999998655432211 0 013699
Q ss_pred EEeCCHHHHHHHHhhc---C-CCCeEEEEecccCCcccccccCcEeEEEEcccccc-h---hhHHHHHHHHHHhccC--C
Q psy11646 65 GLDVSPNMIKHAKNHH---T-NPKLEFVVANIADQNLESIFLAKFNKIFSFYCLHW-V---QDQRQAISNIYNLLMP--G 134 (433)
Q Consensus 65 gvDiS~~~l~~A~~~~---~-~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~-~---~d~~~~l~~i~~~Lkp--G 134 (433)
|+|+++.|++.|++++ + ...+++.++|+.+.+.+ .+||+|+++..+.. + .+...+++.+.+.||+ |
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~----~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g 336 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN----KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKT 336 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC----CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTT
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc----CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCC
Confidence 9999999999999987 2 24699999999886433 58999999987642 2 3456677777788876 8
Q ss_pred CEEEEEec
Q psy11646 135 GEVLLLLN 142 (433)
Q Consensus 135 G~lll~~~ 142 (433)
|.+++...
T Consensus 337 ~~~~iit~ 344 (384)
T 3ldg_A 337 WSQFILTN 344 (384)
T ss_dssp SEEEEEES
T ss_pred cEEEEEEC
Confidence 98887754
No 267
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.82 E-value=2.9e-08 Score=100.47 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEeccc
Q psy11646 17 DAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIA 93 (433)
Q Consensus 17 ~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~ 93 (433)
.+..++..+.+ ..++.+|||+|||+|.++..+ ++. + .+|+|+|+|+.|++.|++++ +.. ++|.++|+.
T Consensus 277 ~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~l-a~~---~-~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~ 347 (425)
T 2jjq_A 277 QAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYL-AKR---G-FNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDR 347 (425)
T ss_dssp HHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHH-HHT---T-CEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTT
T ss_pred HHHHHHHHhhc---cCCCCEEEEeeccchHHHHHH-HHc---C-CEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChH
Confidence 34455555554 357889999999999999544 432 2 59999999999999999987 334 899999998
Q ss_pred CCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 94 DQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 94 ~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+. ++ .+||+|++........ ..+++.+. .|+|||.++++.
T Consensus 348 ~~-~~----~~fD~Vv~dPPr~g~~--~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 348 EV-SV----KGFDTVIVDPPRAGLH--PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TC-CC----TTCSEEEECCCTTCSC--HHHHHHHH-HHCCSEEEEEES
T ss_pred Hc-Cc----cCCCEEEEcCCccchH--HHHHHHHH-hcCCCcEEEEEC
Confidence 75 22 3799999977643221 23455444 589999988864
No 268
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.81 E-value=3.8e-08 Score=95.42 Aligned_cols=115 Identities=12% Similarity=0.051 Sum_probs=79.0
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccccccCcE
Q psy11646 29 FKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
+...++.+|||+|||+|..+..++....+. .+|+++|+++.+++.+++++ +..+++++.+|+..........++|
T Consensus 98 l~~~~g~~VLDlcaG~G~kt~~la~~~~~~--g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~f 175 (309)
T 2b9e_A 98 LDPPPGSHVIDACAAPGNKTSHLAALLKNQ--GKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEV 175 (309)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTE
T ss_pred hCCCCCCEEEEeCCChhHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCC
Confidence 345789999999999999995544433233 49999999999999999987 4468999999987653211112579
Q ss_pred eEEEEccc------ccch-----------hh-------HHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 106 NKIFSFYC------LHWV-----------QD-------QRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 106 D~Vis~~~------l~~~-----------~d-------~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
|.|++... +..- .+ +...+..+.++++ ||+++.++.+..+
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ 239 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh
Confidence 99997322 2110 01 2345777777786 9998887655433
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.79 E-value=4.9e-08 Score=91.70 Aligned_cols=90 Identities=21% Similarity=0.376 Sum_probs=69.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES 99 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~ 99 (433)
.+++.+++.+...++.+|||||||+|.++.. ++.. + ..+++|+|+++.|++.++++ ...+++++++|+...++++
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~-L~~~-~--~~~v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKV-LLQH-P--LKKLYVIELDREMVENLKSI-GDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHH-HTTS-C--CSEEEEECCCHHHHHHHTTS-CCTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHH-HHHc-C--CCeEEEEECCHHHHHHHHhc-cCCCeEEEEcchhhCChhH
Confidence 4556667777777899999999999999944 4432 1 25999999999999999988 6678999999999877664
Q ss_pred cccCcEeEEEEcccccc
Q psy11646 100 IFLAKFNKIFSFYCLHW 116 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~ 116 (433)
.. +.+ .|+++...+.
T Consensus 93 ~~-~~~-~vv~NlPy~i 107 (249)
T 3ftd_A 93 LG-KEL-KVVGNLPYNV 107 (249)
T ss_dssp SC-SSE-EEEEECCTTT
T ss_pred cc-CCc-EEEEECchhc
Confidence 22 234 7777777654
No 270
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.79 E-value=1.4e-08 Score=100.70 Aligned_cols=141 Identities=17% Similarity=0.238 Sum_probs=83.9
Q ss_pred hhhhhhhhhhcHHHH---HHHHHHHHHhcCCCC-----CCEEEEECCCCChhHHHHhc-------ccC------CCCCcE
Q psy11646 4 ATLYETNNSMQQLDA---AKLLSQYIDQFKWTD-----NESVLDVGCGPGNVTSKLLL-------PNL------PKSVVK 62 (433)
Q Consensus 4 a~~Y~~~~~~~~~~~---~~ll~~l~~~l~~~~-----~~~VLDIGcG~G~~~~~~l~-------~~~------~~~~~~ 62 (433)
+..|++.+..|+... ..++++.++.+...+ +.+|+|+|||+|..+..++. ... +.. .+
T Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe-~~ 93 (374)
T 3b5i_A 15 QDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPE-FT 93 (374)
T ss_dssp -----------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCC-EE
T ss_pred cchHHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCc-ee
Confidence 357888888887644 566776777666543 57899999999999854421 111 122 58
Q ss_pred EEEEeCCHHHHHHHHhhcCC---------------CCeEEEEecccCCcccccccCcEeEEEEcccccchh---------
Q psy11646 63 LVGLDVSPNMIKHAKNHHTN---------------PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQ--------- 118 (433)
Q Consensus 63 v~gvDiS~~~l~~A~~~~~~---------------~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~--------- 118 (433)
+...|+........=+.+.. .+-.|..+.....-...++.++||+|+|+.+|||+.
T Consensus 94 v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~ 173 (374)
T 3b5i_A 94 AFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDR 173 (374)
T ss_dssp EEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCT
T ss_pred EEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhcc
Confidence 88888877665433332210 011233333332111113459999999999999986
Q ss_pred -----------------------------hHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 119 -----------------------------DQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 119 -----------------------------d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
|...+++..++.|+|||+++++..+..
T Consensus 174 ~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 174 RSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRT 229 (374)
T ss_dssp TSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECC
T ss_pred ccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 445568899999999999999987653
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.71 E-value=3.8e-08 Score=93.93 Aligned_cols=95 Identities=14% Similarity=0.216 Sum_probs=69.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES 99 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~ 99 (433)
.+++.+++.+...++.+|||||||+|.++..++. .......+|+|+|+++.|++.++++. ..+++++++|+.+.++++
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~-~~~~~~~~V~avDid~~~l~~a~~~~-~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIA-RLATPGSPLHAVELDRDLIGRLEQRF-GELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHH-HHCBTTBCEEEEECCHHHHHHHHHHH-GGGEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHH-hCCCcCCeEEEEECCHHHHHHHHHhc-CCCcEEEECChhcCChhH
Confidence 3455666667777899999999999999955544 32210024999999999999999884 468999999999887765
Q ss_pred ccc-C--cEeEEEEcccccc
Q psy11646 100 IFL-A--KFNKIFSFYCLHW 116 (433)
Q Consensus 100 ~~~-~--~fD~Vis~~~l~~ 116 (433)
... . ..+.|+++..++-
T Consensus 107 ~~~~~~~~~~~vv~NlPY~i 126 (279)
T 3uzu_A 107 IARPGDEPSLRIIGNLPYNI 126 (279)
T ss_dssp GSCSSSSCCEEEEEECCHHH
T ss_pred hcccccCCceEEEEccCccc
Confidence 322 1 3457888776553
No 272
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.70 E-value=3.6e-08 Score=95.12 Aligned_cols=91 Identities=18% Similarity=0.392 Sum_probs=67.9
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC--CCCeEEEEecccCCc--
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT--NPKLEFVVANIADQN-- 96 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~--~~~i~~~~~Di~~~~-- 96 (433)
+++++++.+..+++.+|||+|||+|..+..+ +...+. .+|+|+|+|+.|++.|+++.. ..+++++++|+...+
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~l-a~~~~~--~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~ 90 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAI-LEHCPG--CRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL 90 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHH-HHHCTT--CEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHH-HHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHH
Confidence 3445666666778999999999999999544 444443 499999999999999999872 268999999987643
Q ss_pred ccccccCcEeEEEEcccc
Q psy11646 97 LESIFLAKFNKIFSFYCL 114 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l 114 (433)
+......+||.|++...+
T Consensus 91 l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 91 LKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp HHHTTCSCEEEEEEECSC
T ss_pred HHhcCCCCCCEEEEcCcc
Confidence 111111579999986654
No 273
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.67 E-value=2.6e-08 Score=93.77 Aligned_cols=92 Identities=11% Similarity=0.203 Sum_probs=68.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCccc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~ 98 (433)
.++..+++.+...++.+|||||||+|.++. ++. ... .+|+++|+++.|++.++++. ...+++++++|+...+++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~--l~~-~~~--~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE--PVG-ERL--DQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFG 82 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH--HHH-TTC--SCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH--hhh-CCC--CeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHH
Confidence 345566666667788999999999999995 543 211 13999999999999999987 335899999999887665
Q ss_pred ccc--cCcEeEEEEcccccc
Q psy11646 99 SIF--LAKFNKIFSFYCLHW 116 (433)
Q Consensus 99 ~~~--~~~fD~Vis~~~l~~ 116 (433)
+.. .+..|.|+++..++-
T Consensus 83 ~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 83 ELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp HHHHHHTSCEEEEEECCTTT
T ss_pred HhhcccCCceEEEECCCCCc
Confidence 421 134578888887653
No 274
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.66 E-value=7.4e-08 Score=94.51 Aligned_cols=105 Identities=12% Similarity=0.151 Sum_probs=75.8
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC-----------CCeEEEEecccCCccccc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN-----------PKLEFVVANIADQNLESI 100 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~-----------~~i~~~~~Di~~~~l~~~ 100 (433)
..+.+||+||||+|..+..+++. .+ .+++++|+++.+++.|++++.. ++++++.+|+... +...
T Consensus 187 p~pkrVL~IGgG~G~~arellk~-~~---~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~-L~~~ 261 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKL-KP---KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV-LKRY 261 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CC---SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH-HHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHC-CC---CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHH-HHhh
Confidence 35789999999999999656553 22 4899999999999999998721 2689999998764 3221
Q ss_pred --ccCcEeEEEEcccc-cc--hh---hHHHHHHHH----HHhccCCCEEEEEe
Q psy11646 101 --FLAKFNKIFSFYCL-HW--VQ---DQRQAISNI----YNLLMPGGEVLLLL 141 (433)
Q Consensus 101 --~~~~fD~Vis~~~l-~~--~~---d~~~~l~~i----~~~LkpGG~lll~~ 141 (433)
..++||+|++-..- .. .+ -...+++.+ .++|+|||.++...
T Consensus 262 ~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 262 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 24789999996532 10 11 113445555 89999999988764
No 275
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.62 E-value=6e-08 Score=96.22 Aligned_cols=142 Identities=19% Similarity=0.224 Sum_probs=89.2
Q ss_pred hhhhhhhhhhcHHHH---HHHHHHHHHhcCC--CC----CCEEEEECCCCChhHHHHhcc-------cCC-------CCC
Q psy11646 4 ATLYETNNSMQQLDA---AKLLSQYIDQFKW--TD----NESVLDVGCGPGNVTSKLLLP-------NLP-------KSV 60 (433)
Q Consensus 4 a~~Y~~~~~~~~~~~---~~ll~~l~~~l~~--~~----~~~VLDIGcG~G~~~~~~l~~-------~~~-------~~~ 60 (433)
+..|++.+. |+... ..++++.+..+.. .+ ..+|+|+||++|..+..++.. ... ..-
T Consensus 15 ~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe 93 (384)
T 2efj_A 15 DTSYAKNSS-YNLFLIRVKPVLEQCIQELLRANLPNINKCFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPT 93 (384)
T ss_dssp -CCHHHHCC-TTTTHHHHHHHHHHHHHHHHHTTCTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CE
T ss_pred hhhHHHhHH-HHHHHHHHHHHHHHHHHHhhhcccCCcCCceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCc
Confidence 456888777 76533 3333333333321 22 578999999999998655443 110 112
Q ss_pred cEEEEEeCC-----------HHHHHHHHhhcC-CCCeEEEEecccCCcccccccCcEeEEEEcccccchhhHHH------
Q psy11646 61 VKLVGLDVS-----------PNMIKHAKNHHT-NPKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQ------ 122 (433)
Q Consensus 61 ~~v~gvDiS-----------~~~l~~A~~~~~-~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~------ 122 (433)
.+++..|+. +.+.+.+++..+ ..+-.|..+.....--.-++.+++|+|+|+.+|||+.+.+.
T Consensus 94 ~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~ 173 (384)
T 2efj_A 94 IQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTEL 173 (384)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC-----
T ss_pred eEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccc
Confidence 588999988 666665544432 12346666655442111134599999999999999854321
Q ss_pred ------------------H---------------HHHHHHhccCCCEEEEEeccCCc
Q psy11646 123 ------------------A---------------ISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 123 ------------------~---------------l~~i~~~LkpGG~lll~~~~~~p 146 (433)
+ |+..++.|+|||++++...+...
T Consensus 174 s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 174 GISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKED 230 (384)
T ss_dssp -CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCT
T ss_pred cccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCC
Confidence 1 56668999999999999876543
No 276
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.61 E-value=6.1e-08 Score=96.75 Aligned_cols=102 Identities=19% Similarity=0.110 Sum_probs=76.6
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCC--eEEEEecccCCccc-ccccCcE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPK--LEFVVANIADQNLE-SIFLAKF 105 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~--i~~~~~Di~~~~l~-~~~~~~f 105 (433)
.++.+|||++||+|.++..++... . +..+|+++|+++.+++.+++++ +..+ +++..+|+... +. . ..++|
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~-~-ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~-l~~~-~~~~f 126 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLET-S-CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFF-LRKE-WGFGF 126 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHC-S-CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH-HHSC-CSSCE
T ss_pred CCCCEEEECCCcccHHHHHHHHhC-C-CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHH-HHHh-hCCCC
Confidence 467899999999999996665532 1 2248999999999999999998 2233 89999998653 21 1 13689
Q ss_pred eEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 106 NKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 106 D~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
|+|++.. . ......+..+.+.|+|||.++++.
T Consensus 127 D~V~lDP-~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDP-F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECC-C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 9999876 2 123457888899999999887764
No 277
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.60 E-value=6.9e-08 Score=100.63 Aligned_cols=120 Identities=17% Similarity=0.117 Sum_probs=84.5
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCC---------------CcEEEEEeCCHHHHHHHHhhc---CC
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKS---------------VVKLVGLDVSPNMIKHAKNHH---TN 82 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~---------------~~~v~gvDiS~~~l~~A~~~~---~~ 82 (433)
+...+++.+...++.+|||.|||+|.++..++....... ...++|+|+++.+++.|+.++ +.
T Consensus 157 iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi 236 (541)
T 2ar0_A 157 LIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI 236 (541)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC
Confidence 334445555556788999999999999855543221110 137999999999999999876 22
Q ss_pred CC-----eEEEEecccCCcccccccCcEeEEEEcccccchhh--------------HHHHHHHHHHhccCCCEEEEEec
Q psy11646 83 PK-----LEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQD--------------QRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 83 ~~-----i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d--------------~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
.. ..+.++|....+. ...++||+|+++.++..... ....+..+.+.|+|||++.++.+
T Consensus 237 ~~~~~~~~~I~~gDtL~~~~--~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 237 EGNLDHGGAIRLGNTLGSDG--ENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CCBGGGTBSEEESCTTSHHH--HTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccccCCeEeCCCccccc--ccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 33 6788888654321 12368999999987754321 23678999999999999988764
No 278
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.60 E-value=1.1e-08 Score=100.45 Aligned_cols=88 Identities=13% Similarity=0.184 Sum_probs=61.8
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEE
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFS 110 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis 110 (433)
+++|.+|||+||++|.++..++. .+ .+|+++|+.+ |-.... ..+++++.+.|+.....+. +.||+|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~----rg-~~V~aVD~~~-l~~~l~---~~~~V~~~~~d~~~~~~~~---~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVK----RN-MWVYSVDNGP-MAQSLM---DTGQVTWLREDGFKFRPTR---SNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHH----TT-CEEEEECSSC-CCHHHH---TTTCEEEECSCTTTCCCCS---SCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHH----CC-CEEEEEEhhh-cChhhc---cCCCeEEEeCccccccCCC---CCcCEEEE
Confidence 46899999999999999954443 23 5999999874 323222 3378999999987765443 68999999
Q ss_pred cccccchhhHHHHHHHHHHhccCC
Q psy11646 111 FYCLHWVQDQRQAISNIYNLLMPG 134 (433)
Q Consensus 111 ~~~l~~~~d~~~~l~~i~~~LkpG 134 (433)
-.+.+ +..+..-+.++|..|
T Consensus 277 Dm~~~----p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 277 DMVEK----PAKVAALMAQWLVNG 296 (375)
T ss_dssp CCSSC----HHHHHHHHHHHHHTT
T ss_pred cCCCC----hHHhHHHHHHHHhcc
Confidence 77654 344555555555544
No 279
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.57 E-value=4.8e-08 Score=96.14 Aligned_cols=144 Identities=15% Similarity=0.120 Sum_probs=96.6
Q ss_pred chhhhhhhhhhcHHHHHH---HHHHHHHhcCC----CCCCEEEEECCCCChhHHHHhccc-----------C--CCCCcE
Q psy11646 3 KATLYETNNSMQQLDAAK---LLSQYIDQFKW----TDNESVLDVGCGPGNVTSKLLLPN-----------L--PKSVVK 62 (433)
Q Consensus 3 ~a~~Y~~~~~~~~~~~~~---ll~~l~~~l~~----~~~~~VLDIGcG~G~~~~~~l~~~-----------~--~~~~~~ 62 (433)
-+..|++.+..|+..... ++++.+..+.. ....+|+|+||++|..+..++... . +..-.+
T Consensus 14 G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~ 93 (359)
T 1m6e_X 14 GENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQ 93 (359)
T ss_dssp TSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEE
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceE
Confidence 356689988888875543 44444443322 234679999999999885444330 0 111268
Q ss_pred EEEEeCCHHHHHHHHhhcCC----CCeEEEEecccCCcccccccCcEeEEEEcccccchhhH------------------
Q psy11646 63 LVGLDVSPNMIKHAKNHHTN----PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQ------------------ 120 (433)
Q Consensus 63 v~gvDiS~~~l~~A~~~~~~----~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~------------------ 120 (433)
|+..|+.......+-+.+.. .+-.|..+.....--.-++.+++|+|+|+.+|||+.+.
T Consensus 94 v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p 173 (359)
T 1m6e_X 94 IFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCP 173 (359)
T ss_dssp EEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSC
T ss_pred EEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCC
Confidence 99999999998888777621 13456666544421111344999999999999998542
Q ss_pred ---------------HHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 121 ---------------RQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 121 ---------------~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
...|+..++.|+|||++++...+...
T Consensus 174 ~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~ 214 (359)
T 1m6e_X 174 QSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRS 214 (359)
T ss_dssp CTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCC
Confidence 23388889999999999999876543
No 280
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.55 E-value=1.8e-07 Score=93.18 Aligned_cols=100 Identities=12% Similarity=0.010 Sum_probs=74.6
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--C---------------C-CCeEEEEecccC
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--T---------------N-PKLEFVVANIAD 94 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--~---------------~-~~i~~~~~Di~~ 94 (433)
++.+|||+|||+|..+..++. ..+. .+|+++|+++.+++.|+++. . . .++++.++|+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~-~~~~--~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~ 123 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFAL-ETPA--EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANR 123 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHH-HSSC--SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHH
T ss_pred CCCEEEECCCchhHHHHHHHH-hCCC--CeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHH
Confidence 578999999999999965554 3333 48999999999999999987 2 2 238889999865
Q ss_pred CcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 95 QNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 95 ~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
. +. ...++||+|+.... . .....+..+.+.|+|||.++++.
T Consensus 124 ~-~~-~~~~~fD~I~lDP~-~---~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 124 L-MA-ERHRYFHFIDLDPF-G---SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp H-HH-HSTTCEEEEEECCS-S---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred H-HH-hccCCCCEEEeCCC-C---CHHHHHHHHHHhcCCCCEEEEEe
Confidence 3 11 11357999996542 1 23567888899999999877754
No 281
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.47 E-value=7.2e-07 Score=95.77 Aligned_cols=121 Identities=15% Similarity=0.207 Sum_probs=83.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccC--CCC-------------------------------------C
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNL--PKS-------------------------------------V 60 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~--~~~-------------------------------------~ 60 (433)
.+...++....+.++.+|||.+||+|.++..++.... +++ .
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 4455566677788889999999999999865543211 010 0
Q ss_pred cEEEEEeCCHHHHHHHHhhc---CC-CCeEEEEecccCCcccccccCcEeEEEEcccccc-h---hhHHHH---HHHHHH
Q psy11646 61 VKLVGLDVSPNMIKHAKNHH---TN-PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHW-V---QDQRQA---ISNIYN 129 (433)
Q Consensus 61 ~~v~gvDiS~~~l~~A~~~~---~~-~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~-~---~d~~~~---l~~i~~ 129 (433)
.+++|+|+++.|++.|++++ +. ..+++.++|+.+...+ ...++||+|+++..+.. + .+.... +.++.+
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~-~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP-LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS-CTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc-cccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 37999999999999999998 22 3489999999875322 11248999999987642 1 233334 444455
Q ss_pred hccCCCEEEEEe
Q psy11646 130 LLMPGGEVLLLL 141 (433)
Q Consensus 130 ~LkpGG~lll~~ 141 (433)
.+.|||.+++..
T Consensus 336 ~~~~g~~~~ilt 347 (703)
T 3v97_A 336 NQFGGWNLSLFS 347 (703)
T ss_dssp HHCTTCEEEEEE
T ss_pred hhCCCCeEEEEe
Confidence 556899988874
No 282
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.41 E-value=8.5e-07 Score=92.22 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=79.6
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CC--CCeEEEEecccCCcccccccCcEe
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TN--PKLEFVVANIADQNLESIFLAKFN 106 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~--~~i~~~~~Di~~~~l~~~~~~~fD 106 (433)
.++.+|+|.+||+|.++..++..........++|+|+++.++..|+.++ +. .++.+.++|......+.....+||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 4688999999999999855544322112258999999999999999876 22 467889998765422222347899
Q ss_pred EEEEccccc--ch------hh---------------HHHHHHHHHHhcc-CCCEEEEEec
Q psy11646 107 KIFSFYCLH--WV------QD---------------QRQAISNIYNLLM-PGGEVLLLLN 142 (433)
Q Consensus 107 ~Vis~~~l~--~~------~d---------------~~~~l~~i~~~Lk-pGG~lll~~~ 142 (433)
+|+++.++. |- .+ .-..+..+.+.|+ |||++.++.+
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 999987663 10 01 0136899999999 9999988764
No 283
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.40 E-value=8.3e-07 Score=93.34 Aligned_cols=101 Identities=13% Similarity=0.154 Sum_probs=68.9
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCC-CCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCcccccccCcEeE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPK-SVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~-~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
.+..|||||||+|-+....+...... ...+|+++|-|+ +...|++.. ...+|+++.+|+++..++ +++|+
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP----EKVDI 431 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP----EKADI 431 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS----SCEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC----cccCE
Confidence 34579999999998853332211111 113789999998 555666554 457899999999998766 79999
Q ss_pred EEEccc--ccchhhHHHHHHHHHHhccCCCEEE
Q psy11646 108 IFSFYC--LHWVQDQRQAISNIYNLLMPGGEVL 138 (433)
Q Consensus 108 Vis~~~--l~~~~d~~~~l~~i~~~LkpGG~ll 138 (433)
|+|=.. +-.-+....++....+.|||||.++
T Consensus 432 IVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 998321 1111223457778889999999864
No 284
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.39 E-value=1.4e-07 Score=88.94 Aligned_cols=80 Identities=16% Similarity=0.220 Sum_probs=59.2
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCH-------HHHHHHHhhc---C-CCCeEEEEecccCCcccc
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSP-------NMIKHAKNHH---T-NPKLEFVVANIADQNLES 99 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~-------~~l~~A~~~~---~-~~~i~~~~~Di~~~~l~~ 99 (433)
..++.+|||+|||+|..+. .++.. + .+|+|+|+|+ .+++.|+++. + ..+++++++|+.+. ++.
T Consensus 81 ~~~~~~VLDlgcG~G~~a~-~lA~~---g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~-l~~ 154 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSF-VLASL---G-LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQ-MPA 154 (258)
T ss_dssp GGGCCCEEETTCTTCHHHH-HHHHT---T-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHH-HHH
T ss_pred cCCcCeEEEeeCccCHHHH-HHHHh---C-CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHH-HHh
Confidence 3567899999999999994 44432 2 4899999999 9999998775 1 13599999998763 222
Q ss_pred ccc--CcEeEEEEcccccc
Q psy11646 100 IFL--AKFNKIFSFYCLHW 116 (433)
Q Consensus 100 ~~~--~~fD~Vis~~~l~~ 116 (433)
..+ ++||+|++..++++
T Consensus 155 ~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 155 LVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHCCCSEEEECCCC--
T ss_pred hhccCCCccEEEECCCCCC
Confidence 222 68999999887765
No 285
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.32 E-value=9e-06 Score=77.60 Aligned_cols=105 Identities=13% Similarity=0.178 Sum_probs=78.6
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--------CCCCeEEEEecccCCccccccc
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--------TNPKLEFVVANIADQNLESIFL 102 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--------~~~~i~~~~~Di~~~~l~~~~~ 102 (433)
++...+||=||.|.|..+..+++ ..+- .+++.+||++..++.|++.+ ..++++++.+|.... +. ...
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk-~~~v--~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~-l~-~~~ 155 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTR-HKNV--ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF-VN-QTS 155 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHT-CTTC--CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT-TS-CSS
T ss_pred CCCCCeEEEECCCchHHHHHHHH-cCCc--ceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH-Hh-hcc
Confidence 35578999999999999966654 3222 48999999999999999876 257999999998765 32 234
Q ss_pred CcEeEEEEcccccch--h--hHHHHHHHHHHhccCCCEEEEE
Q psy11646 103 AKFNKIFSFYCLHWV--Q--DQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~--~--d~~~~l~~i~~~LkpGG~lll~ 140 (433)
++||+|+.-..=..- . -....++.+++.|+|||.++..
T Consensus 156 ~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp CCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 789999974321110 0 1246789999999999998865
No 286
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.30 E-value=6.8e-07 Score=89.46 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=58.5
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-----CCCeEEEEecccCCcccccccCcEeE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-----NPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-----~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
++.+|||+|||+|..+. .+++. +.+|+++|+|+.|++.|++++. ..+++++++|+.+. ++....++||+
T Consensus 93 ~g~~VLDLgcG~G~~al-~LA~~----g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~-L~~~~~~~fDv 166 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFI-ALMSK----ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEY-LPLIKTFHPDY 166 (410)
T ss_dssp TTCEEEESSCSSSHHHH-HHHTT----CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGS-HHHHHHHCCSE
T ss_pred CCCEEEEeCCCchHHHH-HHHhc----CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHh-hhhccCCCceE
Confidence 58899999999999984 44432 2599999999999999999871 25799999998764 22212258999
Q ss_pred EEEcccc
Q psy11646 108 IFSFYCL 114 (433)
Q Consensus 108 Vis~~~l 114 (433)
|++....
T Consensus 167 V~lDPPr 173 (410)
T 3ll7_A 167 IYVDPAR 173 (410)
T ss_dssp EEECCEE
T ss_pred EEECCCC
Confidence 9996543
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.21 E-value=4.5e-06 Score=78.80 Aligned_cols=89 Identities=19% Similarity=0.272 Sum_probs=68.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc--cc
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN--LE 98 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~--l~ 98 (433)
+++++++.+..+++..+||.+||.|..+..++.. . .+|+|+|.++.+++.|++ +...++++++++..... +.
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~--g~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER---G--GRVIGLDQDPEAVARAKG-LHLPGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT---T--CEEEEEESCHHHHHHHHH-TCCTTEEEEESCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---C--CEEEEEeCCHHHHHHHHh-hccCCEEEEECCcchHHHHHH
Confidence 3556677777788999999999999999666653 2 499999999999999999 74368999999988642 12
Q ss_pred ccccCcEeEEEEccccc
Q psy11646 99 SIFLAKFNKIFSFYCLH 115 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~ 115 (433)
....+++|.|++...+.
T Consensus 84 ~~g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 84 ALGVERVDGILADLGVS 100 (285)
T ss_dssp HTTCSCEEEEEEECSCC
T ss_pred HcCCCCcCEEEeCCccc
Confidence 11225799999865543
No 288
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.19 E-value=3.1e-06 Score=89.03 Aligned_cols=105 Identities=15% Similarity=0.145 Sum_probs=70.5
Q ss_pred CCEEEEECCCCChhHHHHhcccC--C--------CCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCcccc-
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNL--P--------KSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLES- 99 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~--~--------~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~~- 99 (433)
+..|||||||+|-++...+.... . ....+|+++|.|+.+...++.+. ...+|+++.+|+++..++.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 45799999999999633222110 0 01148999999997776655543 3467999999999876630
Q ss_pred -cccCcEeEEEEcccccch--hhHHHHHHHHHHhccCCCEEE
Q psy11646 100 -IFLAKFNKIFSFYCLHWV--QDQRQAISNIYNLLMPGGEVL 138 (433)
Q Consensus 100 -~~~~~fD~Vis~~~l~~~--~d~~~~l~~i~~~LkpGG~ll 138 (433)
...++.|+|+|=..=... +-....+..+.+.|||||.++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 113789999995432111 223457777789999999765
No 289
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.17 E-value=1.3e-06 Score=90.94 Aligned_cols=119 Identities=13% Similarity=0.073 Sum_probs=77.9
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccC---C--C-------CCcEEEEEeCCHHHHHHHHhhc---C-CCC
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNL---P--K-------SVVKLVGLDVSPNMIKHAKNHH---T-NPK 84 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~---~--~-------~~~~v~gvDiS~~~l~~A~~~~---~-~~~ 84 (433)
+...+++.+...++ +|||.+||+|.++..++.... + . ....++|+|+++.++..|+.++ + ..+
T Consensus 233 Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~ 311 (544)
T 3khk_A 233 IVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFN 311 (544)
T ss_dssp HHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCB
T ss_pred HHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcc
Confidence 34444444444444 999999999999855432110 0 0 0148999999999999999876 2 123
Q ss_pred eEEEEecccCCcccccccCcEeEEEEcccccch---h-------------------------h-HHHHHHHHHHhccCCC
Q psy11646 85 LEFVVANIADQNLESIFLAKFNKIFSFYCLHWV---Q-------------------------D-QRQAISNIYNLLMPGG 135 (433)
Q Consensus 85 i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~---~-------------------------d-~~~~l~~i~~~LkpGG 135 (433)
+.+.++|....+ .....+||+|+++.++..- . + .-..+..+.+.|+|||
T Consensus 312 i~i~~gDtL~~~--~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 389 (544)
T 3khk_A 312 FGKKNADSFLDD--QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTG 389 (544)
T ss_dssp CCSSSCCTTTSC--SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEE
T ss_pred cceeccchhcCc--ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCc
Confidence 333566644322 1223789999998877531 0 0 1157889999999999
Q ss_pred EEEEEec
Q psy11646 136 EVLLLLN 142 (433)
Q Consensus 136 ~lll~~~ 142 (433)
++.++.+
T Consensus 390 r~aiVlP 396 (544)
T 3khk_A 390 SMALLLA 396 (544)
T ss_dssp EEEEEEE
T ss_pred eEEEEec
Confidence 9888764
No 290
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.17 E-value=3e-05 Score=69.98 Aligned_cols=109 Identities=11% Similarity=0.069 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C---CCCeEEEE
Q psy11646 16 LDAAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T---NPKLEFVV 89 (433)
Q Consensus 16 ~~~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~---~~~i~~~~ 89 (433)
+...++|...+ .+..+|||+||| ..+ .++++. +. .+|+.+|.+++..+.|++++ + ..+++++.
T Consensus 18 ~~~~~~L~~~l-----~~a~~VLEiGtG--yST-l~lA~~-~~--g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~ 86 (202)
T 3cvo_A 18 PAEAEALRMAY-----EEAEVILEYGSG--GST-VVAAEL-PG--KHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVW 86 (202)
T ss_dssp HHHHHHHHHHH-----HHCSEEEEESCS--HHH-HHHHTS-TT--CEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEE
T ss_pred HHHHHHHHHHh-----hCCCEEEEECch--HHH-HHHHHc-CC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEE
Confidence 34445555433 246799999985 455 455543 33 49999999999999999887 2 45799999
Q ss_pred ecccCCc-------------ccc-------c-ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 90 ANIADQN-------------LES-------I-FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 90 ~Di~~~~-------------l~~-------~-~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
+|+.... ++. . ..++||+|+.-.-. ....+..+.++|+|||.+++-
T Consensus 87 gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 87 TDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp CCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEET
T ss_pred eCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEEe
Confidence 9965420 111 0 12689999987642 124455677999999998653
No 291
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.15 E-value=1.8e-05 Score=84.47 Aligned_cols=109 Identities=10% Similarity=0.081 Sum_probs=72.2
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCC-CCCcEEEEEeCCHHHHHHH--HhhcC-------CCCeEEEEecccCCcccccc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLP-KSVVKLVGLDVSPNMIKHA--KNHHT-------NPKLEFVVANIADQNLESIF 101 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~-~~~~~v~gvDiS~~~l~~A--~~~~~-------~~~i~~~~~Di~~~~l~~~~ 101 (433)
.++.+|||.|||+|.++..++. ..+ ....+++|+|+++.+++.| +.+.. .....+...|+... ....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~-~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~--~~~~ 396 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSA-GFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSL--NPED 396 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHH-TSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGC--CGGG
T ss_pred CCCCEEEECCCCccHHHHHHHH-HhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcc--cccc
Confidence 4688999999999999855443 332 1124799999999999999 44331 11224444444331 1122
Q ss_pred cCcEeEEEEcccccc---hh----h----------------------HHHHHHHHHHhccCCCEEEEEecc
Q psy11646 102 LAKFNKIFSFYCLHW---VQ----D----------------------QRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~---~~----d----------------------~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
.++||+|+++..+.. .. + ....+..+.++|+|||++.+..+.
T Consensus 397 ~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 397 FANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp GTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred cCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 378999999988732 10 0 123577889999999999988654
No 292
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.15 E-value=7.4e-06 Score=80.65 Aligned_cols=113 Identities=17% Similarity=0.129 Sum_probs=80.2
Q ss_pred cCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C------CCCeEEEEecccCCcccc
Q psy11646 29 FKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T------NPKLEFVVANIADQNLES 99 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~------~~~i~~~~~Di~~~~l~~ 99 (433)
+..+||.+|||+++|+|.-+..++ ..... ..++++|+++.-++..++++ . ..++.+...|.... ..
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la-~~~~~--~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~--~~ 218 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALL-QTGCC--RNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKW--GE 218 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHH-HTTCE--EEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGH--HH
T ss_pred hCCCCCCEEEEecCCccHHHHHHH-HhcCC--CcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhc--ch
Confidence 456789999999999999985544 44333 38999999999988887765 1 14677777776653 22
Q ss_pred cccCcEeEEEEccccc--------------ch--h--------hHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 100 IFLAKFNKIFSFYCLH--------------WV--Q--------DQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~--------------~~--~--------d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
...+.||.|++-.... +. . -+...+.+..++|||||+|+-++.+..+
T Consensus 219 ~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 3347899999732211 10 0 1346788899999999999998876554
No 293
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.10 E-value=1.1e-06 Score=82.61 Aligned_cols=103 Identities=11% Similarity=0.089 Sum_probs=66.0
Q ss_pred HHHhcCCCCC--CEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhh-------cC----C-CCeEEEEe
Q psy11646 25 YIDQFKWTDN--ESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNH-------HT----N-PKLEFVVA 90 (433)
Q Consensus 25 l~~~l~~~~~--~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~-------~~----~-~~i~~~~~ 90 (433)
+.+.+..+++ .+|||+|||+|..+..+ +.. + .+|+++|+++.+.+.+++. .. . .+++++++
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~l-A~~---g-~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~ 152 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVL-ASV---G-CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHA 152 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHH-HHH---T-CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEES
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHH-HHc---C-CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEEC
Confidence 3444445566 89999999999999444 433 3 4899999999764444433 21 1 46899999
Q ss_pred cccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCC
Q psy11646 91 NIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGG 135 (433)
Q Consensus 91 Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG 135 (433)
|..+. ++. ..++||+|++..++.+-. ...++++..+.|++.+
T Consensus 153 D~~~~-L~~-~~~~fDvV~lDP~y~~~~-~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 153 SSLTA-LTD-ITPRPQVVYLDPMFPHKQ-KSALVKKEMRVFQSLV 194 (258)
T ss_dssp CHHHH-STT-CSSCCSEEEECCCCCCCC-C-----HHHHHHHHHS
T ss_pred CHHHH-HHh-CcccCCEEEEcCCCCCcc-cchHHHHHHHHHHHhh
Confidence 98763 221 124799999998886632 2345566666776544
No 294
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.92 E-value=1.9e-05 Score=73.13 Aligned_cols=116 Identities=9% Similarity=0.056 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCC-CCe---EEEEe-cc
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTN-PKL---EFVVA-NI 92 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~-~~i---~~~~~-Di 92 (433)
+.-.|.++-++.-++|+.+|||+||++|.|+ ..++...+- ..|.|.++.... . ....... .++ .|.++ |+
T Consensus 58 AayKL~EIdeK~likpg~~VVDLGaAPGGWS-QvAa~~~~v--g~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df 132 (269)
T 2px2_A 58 GTAKLRWLVERRFVQPIGKVVDLGCGRGGWS-YYAATMKNV--QEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDV 132 (269)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEETCTTSHHH-HHHTTSTTE--EEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCG
T ss_pred HHHHHHHHHHcCCCCCCCEEEEcCCCCCHHH-HHHhhhcCC--CCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCc
Confidence 3444556776665689999999999999999 666554111 133444443321 0 0000011 344 44446 88
Q ss_pred cCCcccccccCcEeEEEEccccc---chhhHH---HHHHHHHHhccCCC-EEEEEecc
Q psy11646 93 ADQNLESIFLAKFNKIFSFYCLH---WVQDQR---QAISNIYNLLMPGG-EVLLLLNA 143 (433)
Q Consensus 93 ~~~~l~~~~~~~fD~Vis~~~l~---~~~d~~---~~l~~i~~~LkpGG-~lll~~~~ 143 (433)
... . ...+|+|+|-.+=. ..-|.. .++.-+.++|+||| .+++=.+.
T Consensus 133 ~~~--~---~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 133 FYK--P---SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp GGS--C---CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cCC--C---CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 763 2 25799999944221 111221 25777779999999 88776554
No 295
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.91 E-value=1.2e-05 Score=75.57 Aligned_cols=107 Identities=16% Similarity=0.180 Sum_probs=68.5
Q ss_pred CCCCEEEEECCCCChhHHHHhccc------CCCC---CcEEEEEeCCH---HHHH-----------HHHhhc--------
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPN------LPKS---VVKLVGLDVSP---NMIK-----------HAKNHH-------- 80 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~------~~~~---~~~v~gvDiS~---~~l~-----------~A~~~~-------- 80 (433)
+++.+|||||+|+|..+..+++.. .|.+ ..+++++|..| +++. .|++..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 356799999999999885544322 3432 25899999876 4444 344432
Q ss_pred -------C--CCCeEEEEecccCCccccccc---CcEeEEEEcc-cccchhh--HHHHHHHHHHhccCCCEEEE
Q psy11646 81 -------T--NPKLEFVVANIADQNLESIFL---AKFNKIFSFY-CLHWVQD--QRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 81 -------~--~~~i~~~~~Di~~~~l~~~~~---~~fD~Vis~~-~l~~~~d--~~~~l~~i~~~LkpGG~lll 139 (433)
. ..++++..+|+.+. ++.... ..||+|+.-. .-...++ ...++..+.++|+|||+++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~-l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINEL-ISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHH-GGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHH-HhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 1 13567888887663 332211 3799999843 1111122 35789999999999998773
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.87 E-value=7.9e-05 Score=77.32 Aligned_cols=123 Identities=13% Similarity=0.051 Sum_probs=82.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCC----------CcEEEEEeCCHHHHHHHHhhc---CCCCeE
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKS----------VVKLVGLDVSPNMIKHAKNHH---TNPKLE 86 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~----------~~~v~gvDiS~~~l~~A~~~~---~~~~i~ 86 (433)
.+...+++.+...++.+|+|-+||+|.+...+........ ...++|+|+++.+...|+-+. +.....
T Consensus 204 ~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~ 283 (530)
T 3ufb_A 204 PVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPR 283 (530)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCE
T ss_pred HHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccc
Confidence 4555556666667888999999999999855543221111 136999999999999998766 444455
Q ss_pred EEEecccCCcccc-cccCcEeEEEEcccccch--h-------------h-HHHHHHHHHHhcc-------CCCEEEEEec
Q psy11646 87 FVVANIADQNLES-IFLAKFNKIFSFYCLHWV--Q-------------D-QRQAISNIYNLLM-------PGGEVLLLLN 142 (433)
Q Consensus 87 ~~~~Di~~~~l~~-~~~~~fD~Vis~~~l~~~--~-------------d-~~~~l~~i~~~Lk-------pGG~lll~~~ 142 (433)
+..+|....+... ....+||+|+++.++..- . + ....+..+.+.|| |||++.++.+
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 6677765443332 233679999999887421 0 1 1234667777776 7999988765
No 297
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.80 E-value=5.6e-05 Score=72.98 Aligned_cols=93 Identities=16% Similarity=0.253 Sum_probs=70.8
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc--cc
Q psy11646 21 LLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN--LE 98 (433)
Q Consensus 21 ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~--l~ 98 (433)
++.+.++.+..+|+..++|..||.|..+..++....+.+ +|+|+|.++.+++.|+ ++...++++++++..... +.
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~G--rVig~D~Dp~Al~~A~-rL~~~Rv~lv~~nF~~l~~~L~ 121 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEG--RLLAIDRDPQAIAVAK-TIDDPRFSIIHGPFSALGEYVA 121 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTC--EEEEEESCHHHHHHHT-TCCCTTEEEEESCGGGHHHHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCC--EEEEEECCHHHHHHHH-hhcCCcEEEEeCCHHHHHHHHH
Confidence 667888888889999999999999999966665444555 9999999999999995 554578999999887642 11
Q ss_pred c-cccCcEeEEEEcccccc
Q psy11646 99 S-IFLAKFNKIFSFYCLHW 116 (433)
Q Consensus 99 ~-~~~~~fD~Vis~~~l~~ 116 (433)
. ...+++|.|+....+..
T Consensus 122 ~~g~~~~vDgILfDLGVSS 140 (347)
T 3tka_A 122 ERDLIGKIDGILLDLGVSS 140 (347)
T ss_dssp HTTCTTCEEEEEEECSCCH
T ss_pred hcCCCCcccEEEECCccCH
Confidence 1 11136999998766543
No 298
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.78 E-value=8e-05 Score=70.80 Aligned_cols=118 Identities=13% Similarity=0.115 Sum_probs=78.2
Q ss_pred HHHHHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCC---CCcEEEEEeCCHH-------------------------
Q psy11646 21 LLSQYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPK---SVVKLVGLDVSPN------------------------- 71 (433)
Q Consensus 21 ll~~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~---~~~~v~gvDiS~~------------------------- 71 (433)
.|..+++.+. ...+++|||+|+..|..+. .++..++. ...+++++|..+.
T Consensus 93 ~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai-~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~ 171 (282)
T 2wk1_A 93 NIRQCVEDVIGNNVPGDLVETGVWRGGACI-LMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLA 171 (282)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECCTTSHHHH-HHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHC
T ss_pred HHHHHHHHHHhcCCCCcEEEeecCchHHHH-HHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccch
Confidence 3344444332 2346699999999999884 44433321 0148999996421
Q ss_pred -HHHHHHhhc---C--CCCeEEEEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 72 -MIKHAKNHH---T--NPKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 72 -~l~~A~~~~---~--~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
.++.+++++ + ..+++++.+|+.+. ++....++||+|+.-.-. -+.....+..+...|+|||.+++-..
T Consensus 172 ~~~~~ar~n~~~~gl~~~~I~li~Gda~et-L~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 172 VSEEEVRRNFRNYDLLDEQVRFLPGWFKDT-LPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCHHHHHHHHHHTTCCSTTEEEEESCHHHH-STTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred hHHHHHHHHHHHcCCCcCceEEEEeCHHHH-HhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 355667666 2 37899999998653 444334789999987643 23345788999999999998887543
No 299
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.66 E-value=1.2e-05 Score=97.22 Aligned_cols=108 Identities=19% Similarity=0.143 Sum_probs=56.4
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCC--CCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCC-cccccccCcEeEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLP--KSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQ-NLESIFLAKFNKI 108 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~--~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~-~l~~~~~~~fD~V 108 (433)
++..+|||||.|+|..+..++..+.. ..+.+|+.+|+|+...+.|++++..-.++....|..+. ++ ..++||+|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~---~~~~ydlv 1315 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPG---SLGKADLL 1315 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC--------CCEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccC---CCCceeEE
Confidence 36789999999999887554443321 12358999999999888888776211222222233221 11 22679999
Q ss_pred EEcccccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 109 FSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 109 is~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
++.+++|..++....+.+++++|||||.+++...
T Consensus 1316 ia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1316 VCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp EEECC--------------------CCEEEEEEC
T ss_pred EEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999999988999999999999999999988653
No 300
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.65 E-value=0.00018 Score=70.78 Aligned_cols=103 Identities=12% Similarity=0.108 Sum_probs=74.3
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-----------CCCeEEEEecccCCcccc--
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-----------NPKLEFVVANIADQNLES-- 99 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-----------~~~i~~~~~Di~~~~l~~-- 99 (433)
++.+||=||.|.|..+..+++. +. .+++.+||++..++.|++.+. .++++++..|.... +..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh--~~--~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~f-l~~~~ 279 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL--KP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV-LKRYA 279 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT--CC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH-HHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc--CC--ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHH-HHhhh
Confidence 5689999999999999666653 22 489999999999999998751 14578888887653 221
Q ss_pred cccCcEeEEEEccccc-------chh---hHHHHHHHHHHhccCCCEEEEE
Q psy11646 100 IFLAKFNKIFSFYCLH-------WVQ---DQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~-------~~~---d~~~~l~~i~~~LkpGG~lll~ 140 (433)
...++||+|+.-..-. ... -....++.+++.|+|||.++..
T Consensus 280 ~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 280 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 1236899999753211 110 1246788999999999998765
No 301
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.62 E-value=0.00011 Score=62.31 Aligned_cols=102 Identities=19% Similarity=0.192 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCC-hhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPG-NVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN 96 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G-~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~ 96 (433)
.+.+.+.+.+.. .++.+|||||||+| ..+ ..|+.. .+..|+++|+++.+++ +++.|+.+..
T Consensus 22 ~e~LaeYI~~~~--~~~~rVlEVG~G~g~~vA-~~La~~---~g~~V~atDInp~Av~------------~v~dDiF~P~ 83 (153)
T 2k4m_A 22 WNDLAVYIIRCS--GPGTRVVEVGAGRFLYVS-DYIRKH---SKVDLVLTDIKPSHGG------------IVRDDITSPR 83 (153)
T ss_dssp HHHHHHHHHHHS--CSSSEEEEETCTTCCHHH-HHHHHH---SCCEEEEECSSCSSTT------------EECCCSSSCC
T ss_pred HHHHHHHHHhcC--CCCCcEEEEccCCChHHH-HHHHHh---CCCeEEEEECCccccc------------eEEccCCCCc
Confidence 334444444444 45679999999999 477 556532 2258999999997544 7778887632
Q ss_pred ccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+. .-+.||+|.++..=. +....+.++.+.. |.-+++..++.
T Consensus 84 ~~--~Y~~~DLIYsirPP~---El~~~i~~lA~~v--~adliI~pL~~ 124 (153)
T 2k4m_A 84 ME--IYRGAALIYSIRPPA---EIHSSLMRVADAV--GARLIIKPLTG 124 (153)
T ss_dssp HH--HHTTEEEEEEESCCT---TTHHHHHHHHHHH--TCEEEEECBTT
T ss_pred cc--ccCCcCEEEEcCCCH---HHHHHHHHHHHHc--CCCEEEEcCCC
Confidence 21 114899998876632 3444555555544 45677765443
No 302
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.39 E-value=0.00031 Score=67.30 Aligned_cols=55 Identities=20% Similarity=0.283 Sum_probs=44.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH 80 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~ 80 (433)
.+++.++.... .++..|||++||+|..+..++. .+ .+++|+|+++.+++.|++++
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~----~g-~~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAAR----WG-RRALGVELVPRYAQLAKERF 277 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHH----TT-CEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHH----cC-CeEEEEeCCHHHHHHHHHHH
Confidence 56667776665 6789999999999999844433 22 48999999999999999987
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.98 E-value=0.0016 Score=61.24 Aligned_cols=97 Identities=20% Similarity=0.207 Sum_probs=64.5
Q ss_pred CCCCCCEEEEECC------CCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccC
Q psy11646 30 KWTDNESVLDVGC------GPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLA 103 (433)
Q Consensus 30 ~~~~~~~VLDIGc------G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~ 103 (433)
..+.+++|||+|+ .+|.+ .+++..+.+ ..++++|+.+-. .... .++++|...... .+
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~---VLr~~~p~g-~~VVavDL~~~~--------sda~-~~IqGD~~~~~~----~~ 168 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTA---VLRQWLPTG-TLLVDSDLNDFV--------SDAD-STLIGDCATVHT----AN 168 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHH---HHHHHSCTT-CEEEEEESSCCB--------CSSS-EEEESCGGGEEE----SS
T ss_pred eecCCCEEEeCCCCCCCCCCCcHH---HHHHhCCCC-cEEEEeeCcccc--------cCCC-eEEEcccccccc----CC
Confidence 3456999999996 77774 344445553 499999998732 1123 458899765322 27
Q ss_pred cEeEEEEccccc---c--------hhhHHHHHHHHHHhccCCCEEEEEecc
Q psy11646 104 KFNKIFSFYCLH---W--------VQDQRQAISNIYNLLMPGGEVLLLLNA 143 (433)
Q Consensus 104 ~fD~Vis~~~l~---~--------~~d~~~~l~~i~~~LkpGG~lll~~~~ 143 (433)
+||+|+|-.+=. + ..=.+.++.-+.+.|+|||.+++=.+-
T Consensus 169 k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQ 219 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 219 (344)
T ss_dssp CEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred CCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEec
Confidence 899999933211 0 011466788889999999999986543
No 304
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.78 E-value=0.0023 Score=62.68 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=54.1
Q ss_pred HHHHHHHHhcCCC------CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEeccc
Q psy11646 20 KLLSQYIDQFKWT------DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIA 93 (433)
Q Consensus 20 ~ll~~l~~~l~~~------~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~ 93 (433)
.+++.+++.+... ++..|||||.|.|.+|..++....+ .+++++|+++.++...++.....+++++.+|+.
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~---~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l 115 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP---RQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPY 115 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC---SEEEEECCCHHHHHHHHHHTTTSSCEEECSCTT
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC---CEEEEEecCHHHHHHHHHhccCCCEEEEECCcc
Confidence 3444455444443 3589999999999999666642211 389999999999999988764468999999985
Q ss_pred CC
Q psy11646 94 DQ 95 (433)
Q Consensus 94 ~~ 95 (433)
..
T Consensus 116 ~~ 117 (353)
T 1i4w_A 116 DW 117 (353)
T ss_dssp CH
T ss_pred ch
Confidence 53
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.47 E-value=0.0046 Score=57.78 Aligned_cols=55 Identities=20% Similarity=0.250 Sum_probs=43.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH 80 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~ 80 (433)
.+++.++.... .++..|||..||+|..+..++. + + .+++|+|+++.+++.|++++
T Consensus 200 ~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~-~---g-r~~ig~e~~~~~~~~~~~r~ 254 (260)
T 1g60_A 200 DLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKK-L---G-RNFIGCDMNAEYVNQANFVL 254 (260)
T ss_dssp HHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHH-T---T-CEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHH-c---C-CeEEEEeCCHHHHHHHHHHH
Confidence 56666666654 6789999999999999844433 2 2 48999999999999999986
No 306
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=96.42 E-value=0.015 Score=53.61 Aligned_cols=90 Identities=20% Similarity=0.229 Sum_probs=68.6
Q ss_pred CCCeEEEecCCCCCCCCCchhHHHHHHHHHHHH----HHHHHhccCCCeEEEEEeecCC--HHHHHHHHhcccceeEEec
Q psy11646 200 EKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGAL----NITTFLLKPGGTFVGKIFRSRN--VVCLETKFQIFFENVSIAK 273 (433)
Q Consensus 200 ~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al----~ia~~~L~~gG~fv~Kif~g~~--~~~~~~~l~~~F~~v~~~K 273 (433)
.++|+|..++.-.-- .-||.|.+---.-+ .-|...|+|||++|+|-+--.| .+.....+-+.|+.+.+.|
T Consensus 210 grYDlVfvNv~TpyR----~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~ 285 (324)
T 3trk_A 210 GRYDLVVINIHTPFR----IHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALK 285 (324)
T ss_dssp CCEEEEEEECCCCCC----SSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEEC
T ss_pred CceeEEEEecCCccc----cchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeec
Confidence 478999888765433 23444432222222 3366799999999999998888 6789999999999999999
Q ss_pred CCCCcccccceeEEEeeccCC
Q psy11646 274 PKSSRNSSIESFIVCQNYRPP 294 (433)
Q Consensus 274 P~~sr~~s~E~~~v~~~~~~~ 294 (433)
|+..-+ +.|+|+|-.+|...
T Consensus 286 P~cv~s-nTEv~~vF~~~Dng 305 (324)
T 3trk_A 286 PPCVTS-NTEMFFLFSNFDNG 305 (324)
T ss_dssp CTTCCB-TTCEEEEEEEECCC
T ss_pred Cccccc-cceEEEEEEeccCC
Confidence 987765 99999999999763
No 307
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=96.03 E-value=0.051 Score=46.13 Aligned_cols=75 Identities=33% Similarity=0.461 Sum_probs=62.6
Q ss_pred ccccCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEE
Q psy11646 172 LLFTGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFV 246 (433)
Q Consensus 172 ~pl~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv 246 (433)
...+.+...++|+.+....+.+...+....+|+|++++.....+....|+....++....+.-+..+|++||.++
T Consensus 59 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 133 (180)
T 1ej0_A 59 DPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFV 133 (180)
T ss_dssp CCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 344677888888887666666666677789999999999888888888888888888999999999999999886
No 308
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.03 E-value=0.005 Score=58.06 Aligned_cols=104 Identities=14% Similarity=0.008 Sum_probs=78.3
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcccc--cccCcEeEEEE
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLES--IFLAKFNKIFS 110 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~--~~~~~fD~Vis 110 (433)
+..+||+=+|||.++..++. .+ .+++.+|.++..++..++++ ...++++...|.... +.. ....+||+|++
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS----~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~-L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR----SQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSK-LNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC----TT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHH-HHHHCSCTTSCEEEEE
T ss_pred CCCceeEeCCcHHHHHHHcC----CC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHH-HHHhcCCCCCccEEEE
Confidence 56799999999999977765 22 59999999999999999998 446789999886442 111 11257999999
Q ss_pred cccccchhhHHHHHHHHHH--hccCCCEEEEEecc
Q psy11646 111 FYCLHWVQDQRQAISNIYN--LLMPGGEVLLLLNA 143 (433)
Q Consensus 111 ~~~l~~~~d~~~~l~~i~~--~LkpGG~lll~~~~ 143 (433)
-..+..-.+...++..+.+ .+.|+|.+++..+.
T Consensus 166 DPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 166 DPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 9888754566666666655 55699999987643
No 309
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=95.49 E-value=0.051 Score=55.20 Aligned_cols=89 Identities=20% Similarity=0.218 Sum_probs=68.5
Q ss_pred CCCeEEEecCCCCCCCCCchhHHHHHHHHHH----HHHHHHHhccCCCeEEEEEeecCC--HHHHHHHHhcccceeEEec
Q psy11646 200 EKVDLVVFDGAPDVTGLHDLDEHLQGLLLIG----ALNITTFLLKPGGTFVGKIFRSRN--VVCLETKFQIFFENVSIAK 273 (433)
Q Consensus 200 ~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~----al~ia~~~L~~gG~fv~Kif~g~~--~~~~~~~l~~~F~~v~~~K 273 (433)
.++|+|..+..-.--. .||.|.+---. .-.=|...|+|||++|+|-+--.| .+.....+.+.|..+.+.|
T Consensus 220 ~ryDlvfvn~~t~yr~----HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~ 295 (670)
T 4gua_A 220 ARYDLVFINIGTKYRN----HHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAAR 295 (670)
T ss_dssp CCEEEEEECCCCCCCS----CHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEEC
T ss_pred CcccEEEEecCCCccc----chHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeC
Confidence 3799999888654333 34444322111 223467899999999999998888 6789999999999999999
Q ss_pred CCCCcccccceeEEEeeccC
Q psy11646 274 PKSSRNSSIESFIVCQNYRP 293 (433)
Q Consensus 274 P~~sr~~s~E~~~v~~~~~~ 293 (433)
|+.+-++ .|+|+|-.+|..
T Consensus 296 p~~~~sn-TEv~~~f~~~Dn 314 (670)
T 4gua_A 296 PDCVSSN-TEMYLIFRQLDN 314 (670)
T ss_dssp CTTCSBT-TCEEEEEEEECC
T ss_pred CCccccC-ceEEEEEEecCC
Confidence 9887665 999999999975
No 310
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.44 E-value=0.018 Score=50.53 Aligned_cols=114 Identities=19% Similarity=0.225 Sum_probs=77.8
Q ss_pred HHHHhcC-CCCCCEEEEECCCCChhHHHHhcccCCCC-------CcEEEEEeCCHHHHHHHHhhcCCCCeEEE-EecccC
Q psy11646 24 QYIDQFK-WTDNESVLDVGCGPGNVTSKLLLPNLPKS-------VVKLVGLDVSPNMIKHAKNHHTNPKLEFV-VANIAD 94 (433)
Q Consensus 24 ~l~~~l~-~~~~~~VLDIGcG~G~~~~~~l~~~~~~~-------~~~v~gvDiS~~~l~~A~~~~~~~~i~~~-~~Di~~ 94 (433)
++...+. .+++.+|||+|||+|.++. .+++..+.. ..+++|+|+|+.+ ...++++. ++|+..
T Consensus 12 ~l~~~~~~~~~~~~vLDlGcG~G~~~~-~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~~~~~~~~~~~d~~~ 82 (196)
T 2nyu_A 12 EVNERHQILRPGLRVLDCGAAPGAWSQ-VAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------PLEGATFLCPADVTD 82 (196)
T ss_dssp HHHHHHCCCCTTCEEEEETCCSCHHHH-HHHHHTTTTCCCTTSCCCEEEEECSSCCC--------CCTTCEEECSCCTTS
T ss_pred HHHHhcCCCCCCCEEEEeCCCCCHHHH-HHHHHhccccccccCCCceEEEEechhcc--------cCCCCeEEEeccCCC
Confidence 3444443 4678999999999999994 455444320 0389999999842 12568888 888765
Q ss_pred Ccccc-----cccCcEeEEEEccccc----chhhH-------HHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 95 QNLES-----IFLAKFNKIFSFYCLH----WVQDQ-------RQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 95 ~~l~~-----~~~~~fD~Vis~~~l~----~~~d~-------~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
..... ...++||+|++..+++ |..+. ..+++++.++|||||.+++.......
T Consensus 83 ~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 83 PRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 43210 1235899999966444 33333 47899999999999999998655433
No 311
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.99 E-value=0.021 Score=56.02 Aligned_cols=101 Identities=15% Similarity=0.090 Sum_probs=64.6
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccc----ccc
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLE----SIF 101 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~----~~~ 101 (433)
+....+++.+||-+|+|. |..+..+++ .. +..+|+++|.+++.++.+++.- .. .++ |..+..+. ...
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~--Ga~~Vi~~~~~~~~~~~a~~lG-a~--~vi--~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAK-VC--GASIIIAVDIVESRLELAKQLG-AT--HVI--NSKTQDPVAAIKEIT 255 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHH-HH--TCSEEEEEESCHHHHHHHHHHT-CS--EEE--ETTTSCHHHHHHHHT
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHH-Hc--CCCeEEEECCCHHHHHHHHHcC-CC--EEe--cCCccCHHHHHHHhc
Confidence 455667899999999875 555534333 32 2137999999999999998652 11 122 22221111 111
Q ss_pred cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 102 LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+.+|+|+-.-.- ...+....+.|++||++++..
T Consensus 256 ~gg~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 256 DGGVNFALESTGS------PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp TSCEEEEEECSCC------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEeC
Confidence 2379999875542 346778899999999988753
No 312
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.90 E-value=0.12 Score=51.01 Aligned_cols=75 Identities=15% Similarity=0.101 Sum_probs=56.1
Q ss_pred CEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccccc-----ccCcEeEEE
Q psy11646 35 ESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESI-----FLAKFNKIF 109 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~-----~~~~fD~Vi 109 (433)
.+++|+-||.|.++..+.. .++..+.++|+++.+++..+.++ ++..++..|+.+...... ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~----aG~~~v~avE~d~~a~~t~~~N~--~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAAR----AGFDVKMAVEIDQHAINTHAINF--PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHH----HTCEEEEEECSCHHHHHHHHHHC--TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHH----CCCcEEEEEeCCHHHHHHHHHhC--CCCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 5899999999999855543 24346789999999999999887 466788899987532221 136799999
Q ss_pred Eccccc
Q psy11646 110 SFYCLH 115 (433)
Q Consensus 110 s~~~l~ 115 (433)
......
T Consensus 77 ggpPCQ 82 (376)
T 3g7u_A 77 GGPPCQ 82 (376)
T ss_dssp ECCCCC
T ss_pred ecCCCC
Confidence 876643
No 313
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.81 E-value=0.06 Score=51.33 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=61.3
Q ss_pred CCCCEEEEECCCCChhHHHHhc---ccCCCCCcEEEEEeCC------------HHHHHHHHhhc---CCCC--eEEEEec
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLL---PNLPKSVVKLVGLDVS------------PNMIKHAKNHH---TNPK--LEFVVAN 91 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~---~~~~~~~~~v~gvDiS------------~~~l~~A~~~~---~~~~--i~~~~~D 91 (433)
++..+|||+|-|+|-.....+. +..+....+++.+|.. ....+....+. ...+ +++..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 3456899999999986532221 2233332456777642 12222222222 1233 4567788
Q ss_pred ccCCcccccccCcEeEEEEcccccchhhH----HHHHHHHHHhccCCCEEE
Q psy11646 92 IADQNLESIFLAKFNKIFSFYCLHWVQDQ----RQAISNIYNLLMPGGEVL 138 (433)
Q Consensus 92 i~~~~l~~~~~~~fD~Vis~~~l~~~~d~----~~~l~~i~~~LkpGG~ll 138 (433)
+.+. +++....+||+|+.-. +..-.++ ..+++.++++++|||.+.
T Consensus 175 a~~~-l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 175 ARKR-IKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp HHHH-GGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred HHHH-HhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 7654 4443345799998743 2211222 578999999999999865
No 314
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.40 E-value=0.094 Score=51.86 Aligned_cols=105 Identities=13% Similarity=0.170 Sum_probs=66.3
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc-cc----c
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL-ES----I 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l-~~----~ 100 (433)
.....+++.+||-+|+|. |..+..+++ .. +..+|+++|.+++.++.+++. +.+. .|..+... .+ .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~--Ga~~Vi~~~~~~~~~~~a~~l----Ga~~--i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGAR-LL--GAACVIVGDQNPERLKLLSDA----GFET--IDLRNSAPLRDQIDQI 249 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHH-HH--TCSEEEEEESCHHHHHHHHTT----TCEE--EETTSSSCHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHH-Hc--CCCEEEEEcCCHHHHHHHHHc----CCcE--EcCCCcchHHHHHHHH
Confidence 445667899999999876 656544443 32 213899999999999998864 2232 23322221 11 1
Q ss_pred cc-CcEeEEEEcccccch--------hhHHHHHHHHHHhccCCCEEEEE
Q psy11646 101 FL-AKFNKIFSFYCLHWV--------QDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 101 ~~-~~fD~Vis~~~l~~~--------~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
.. ..+|+|+-.-.-... ......+....+.|++||++++.
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 11 269999876553210 01234678889999999998765
No 315
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=94.36 E-value=0.042 Score=48.61 Aligned_cols=44 Identities=20% Similarity=0.104 Sum_probs=30.5
Q ss_pred CcEeEEEEcccccc----h-------hhHHHHHHHHHHhccCCCEEEEEeccCCc
Q psy11646 103 AKFNKIFSFYCLHW----V-------QDQRQAISNIYNLLMPGGEVLLLLNAFNP 146 (433)
Q Consensus 103 ~~fD~Vis~~~l~~----~-------~d~~~~l~~i~~~LkpGG~lll~~~~~~p 146 (433)
++||+|++...... . .....+++.+.++|||||.+++.......
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 47899998653221 1 12357789999999999999987654433
No 316
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.32 E-value=0.039 Score=53.71 Aligned_cols=78 Identities=18% Similarity=0.163 Sum_probs=54.1
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEccc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFYC 113 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~ 113 (433)
..+|+|+-||.|.++..+.. ..- ....+.++|+++.+++..+.++ ++..+..+|+.+..........+|+|+....
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~-~G~-~~~~v~~~E~d~~a~~~~~~N~--~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRE-SCI-PAQVVAAIDVNTVANEVYKYNF--PHTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHH-HTC-SEEEEEEECCCHHHHHHHHHHC--TTSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CCeEEEeCcCccHHHHHHHH-CCC-CceEEEEEeCCHHHHHHHHHhc--cccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 35899999999999855443 210 0237999999999999999998 3445778898875322111126899999776
Q ss_pred cc
Q psy11646 114 LH 115 (433)
Q Consensus 114 l~ 115 (433)
..
T Consensus 78 Cq 79 (343)
T 1g55_A 78 CQ 79 (343)
T ss_dssp --
T ss_pred Cc
Confidence 44
No 317
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=94.15 E-value=0.057 Score=47.47 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=35.6
Q ss_pred CcEeEEEEcccccch----hhH-------HHHHHHHHHhccCCCEEEEEeccCCchhhHH
Q psy11646 103 AKFNKIFSFYCLHWV----QDQ-------RQAISNIYNLLMPGGEVLLLLNAFNPIYDLY 151 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~----~d~-------~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~ 151 (433)
++||+|++..++++. .+. ..+++++.++|||||.+++............
T Consensus 105 ~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~ 164 (201)
T 2plw_A 105 KKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLK 164 (201)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHH
T ss_pred CcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHH
Confidence 689999999887763 222 2478999999999999998665444333333
No 318
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.11 E-value=0.3 Score=46.64 Aligned_cols=104 Identities=11% Similarity=0.134 Sum_probs=73.7
Q ss_pred CEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC------CCCeEEEEecccCCcccc-cc-----c
Q psy11646 35 ESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT------NPKLEFVVANIADQNLES-IF-----L 102 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~------~~~i~~~~~Di~~~~l~~-~~-----~ 102 (433)
..|++||||-=....++ . .+.+ .+++-+| -|..++..++.+. ..+..++.+|+.+ ...+ .. .
T Consensus 104 ~QvV~LGaGlDTra~Rl-~--~~~~-~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~ 177 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRL-D--WPTG-TTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDP 177 (310)
T ss_dssp CEEEEETCTTCCHHHHS-C--CCTT-CEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCT
T ss_pred CeEEEeCCCCCchhhhc-c--CCCC-cEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCC
Confidence 46999999987765332 2 1333 5899999 5888888877762 4567889999987 3322 11 1
Q ss_pred CcEeEEEEcccccchhh--HHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 103 AKFNKIFSFYCLHWVQD--QRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~~d--~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
+.-=++++-.+++++++ ...+++.+.+.+.||+.+++.....
T Consensus 178 ~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 178 SARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp TSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 33457788888898854 5678889989889999988875443
No 319
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.94 E-value=0.03 Score=49.49 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=61.2
Q ss_pred hcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-----c
Q psy11646 28 QFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-----I 100 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-----~ 100 (433)
....+++.+||..|++ .|..+..+++. .+ .+|+++|.+++.++.+++. + ... ..|..+....+ .
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~---~G-~~V~~~~~~~~~~~~~~~~-g---~~~-~~d~~~~~~~~~~~~~~ 103 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKM---IG-ARIYTTAGSDAKREMLSRL-G---VEY-VGDSRSVDFADEILELT 103 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHH---HT-CEEEEEESSHHHHHHHHTT-C---CSE-EEETTCSTHHHHHHHHT
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHH---cC-CEEEEEeCCHHHHHHHHHc-C---CCE-EeeCCcHHHHHHHHHHh
Confidence 3456789999999953 34444333332 23 5899999999988877653 2 111 22443321111 0
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+|+|+.+.. ...+....+.|+|||+++...
T Consensus 104 ~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 104 DGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp TTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECS
T ss_pred CCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEc
Confidence 1236999997653 135778889999999988753
No 320
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.91 E-value=0.083 Score=51.76 Aligned_cols=101 Identities=13% Similarity=0.124 Sum_probs=64.3
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc------
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES------ 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~------ 99 (433)
.....+++.+||=+|+|. |..+.. +++.. +..+|+++|.+++.++.+++.- .. .. .|..+..+.+
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~--Ga~~Vi~~~~~~~~~~~a~~lG-a~--~v--i~~~~~~~~~~i~~~~ 247 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQ-LARLA--GATTVILSTRQATKRRLAEEVG-AT--AT--VDPSAGDVVEAIAGPV 247 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHH-HHHHT--TCSEEEEECSCHHHHHHHHHHT-CS--EE--ECTTSSCHHHHHHSTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHH-HHHHc--CCCEEEEECCCHHHHHHHHHcC-CC--EE--ECCCCcCHHHHHHhhh
Confidence 555678899999999864 444433 33332 3238999999999999988752 11 11 2222211111
Q ss_pred -cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 -IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 -~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+.+|+|+-.-.- ...+....++|++||++++..
T Consensus 248 ~~~~gg~Dvvid~~G~------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 248 GLVPGGVDVVIECAGV------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp SSSTTCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred hccCCCCCEEEECCCC------HHHHHHHHHHhccCCEEEEEe
Confidence 112479999875431 346778889999999988753
No 321
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.91 E-value=0.22 Score=49.13 Aligned_cols=105 Identities=14% Similarity=0.176 Sum_probs=66.3
Q ss_pred hcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc-cc----cc-
Q psy11646 28 QFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN-LE----SI- 100 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~-l~----~~- 100 (433)
....+++.+||-+|+|. |..+.. +++.. +..+|+++|.+++.++.+++. +.+. .|..... +. ..
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiq-lAk~~--Ga~~Vi~~~~~~~~~~~a~~l----Ga~~--i~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAA-SARLL--GAAVVIVGDLNPARLAHAKAQ----GFEI--ADLSLDTPLHEQIAALL 250 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHH-HHHHT--TCSEEEEEESCHHHHHHHHHT----TCEE--EETTSSSCHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHH-HHHHC--CCCeEEEEcCCHHHHHHHHHc----CCcE--EccCCcchHHHHHHHHh
Confidence 45667899999999865 555533 33332 223799999999999999764 2232 2322211 11 11
Q ss_pred ccCcEeEEEEccccc---------chhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLH---------WVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~---------~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+|+|+-.-.-. +.+++...+....++|++||++++..
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 113699999765422 12234457888899999999987753
No 322
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=93.89 E-value=0.59 Score=45.08 Aligned_cols=115 Identities=13% Similarity=0.210 Sum_probs=76.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-C----------------
Q psy11646 19 AKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-T---------------- 81 (433)
Q Consensus 19 ~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~---------------- 81 (433)
...+.++++. .+...|+.+|||......++... .+ ..+++-+|. |+.++.-++.+ .
T Consensus 86 D~~v~~fl~~---~~~~qVV~LGaGlDTr~~RL~~~-~~--~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~ 158 (334)
T 1rjd_A 86 DAAILEFLVA---NEKVQVVNLGCGSDLRMLPLLQM-FP--HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTA 158 (334)
T ss_dssp HHHHHHHHHH---CSSEEEEEETCTTCCTHHHHHHH-CT--TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCC
T ss_pred HHHHHHHHHH---CCCcEEEEeCCCCccHHHHhcCc-CC--CCEEEECCC-HHHHHHHHHHhhhccchhhhccccccccc
Confidence 3444444443 35678999999999988666542 12 258888888 77776655554 1
Q ss_pred -------CCCeEEEEecccCCcc-----ccc-ccCcEeEEEEcccccchh--hHHHHHHHHHHhccCCCEEEEEe
Q psy11646 82 -------NPKLEFVVANIADQNL-----ESI-FLAKFNKIFSFYCLHWVQ--DQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 82 -------~~~i~~~~~Di~~~~l-----~~~-~~~~fD~Vis~~~l~~~~--d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
..+..++..|+.+... ... ..+...++++-.++.+++ ....+++.+.+.. |+|.+++.+
T Consensus 159 ~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 159 KSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp CTTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred ccccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEe
Confidence 2578899999987422 111 225578999999999985 3566788888877 677765543
No 323
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.89 E-value=0.056 Score=52.17 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=64.6
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccccc---cc
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESI---FL 102 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~---~~ 102 (433)
.....+++.+||-+|+|. |..+..+++ .. + .+|+++|.+++.++.+++.- .. .. .|..+....+. ..
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~--G-a~Vi~~~~~~~~~~~~~~lG-a~--~~--i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYAR-AM--G-LRVAAVDIDDAKLNLARRLG-AE--VA--VNARDTDPAAWLQKEI 230 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHH-HT--T-CEEEEEESCHHHHHHHHHTT-CS--EE--EETTTSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHH-HC--C-CeEEEEeCCHHHHHHHHHcC-CC--EE--EeCCCcCHHHHHHHhC
Confidence 445667899999999875 555533333 32 3 59999999999999998752 11 11 23222212110 12
Q ss_pred CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 103 AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+.+|+|+-... ....+....+.|+++|++++..
T Consensus 231 g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 231 GGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeC
Confidence 47899886543 1346778889999999988753
No 324
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.85 E-value=0.11 Score=48.34 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=70.4
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhccc-------CCCCCcEEEEEeC-----CH---------------------
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPN-------LPKSVVKLVGLDV-----SP--------------------- 70 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~-------~~~~~~~v~gvDi-----S~--------------------- 70 (433)
++.+.+. .-++.|+|+|+-.|..+.. ++.. .+. .++++.|. .+
T Consensus 61 ~l~~~i~-~vpG~ivE~GV~rG~S~~~-~a~~~~~l~~~~~~--r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~ 136 (257)
T 3tos_A 61 ALYRQVL-DVPGVIMEFGVRFGRHLGT-FAALRGVYEPYNPL--RRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGY 136 (257)
T ss_dssp HHHHHTT-TSCSEEEEECCTTCHHHHH-HHHHHHHHCTTCTT--CCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTH
T ss_pred HHHHHhh-CCCCeEEEEecccCHHHHH-HHHHHHHhcccCCC--CEEEEEECCCCCCCCccccccccccccCcccccchh
Confidence 3344433 3345899999999998743 3221 122 38999982 21
Q ss_pred -HHHHHH---Hh---hcC--CCCeEEEEecccCCccccc----ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEE
Q psy11646 71 -NMIKHA---KN---HHT--NPKLEFVVANIADQNLESI----FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEV 137 (433)
Q Consensus 71 -~~l~~A---~~---~~~--~~~i~~~~~Di~~~~l~~~----~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~l 137 (433)
+.++.. .+ +++ ..+++++.+++.+. ++.. ...+||+|+.-.-. -......+..+...|+|||.+
T Consensus 137 ~~~l~~~l~~~~~~~~~g~~~~~i~li~G~~~dT-L~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvI 213 (257)
T 3tos_A 137 PAYLKEVLDAHECSDFFGHVTQRSVLVEGDVRET-VPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIV 213 (257)
T ss_dssp HHHHHHHHHHHHTTSTTTTSCCSEEEEESCHHHH-HHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEE
T ss_pred HHHHHHHHHHHhhhhhcCCCCCcEEEEEecHHHH-HHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEE
Confidence 112211 11 222 37899999998764 3331 23579999986643 234566788999999999999
Q ss_pred EEEec
Q psy11646 138 LLLLN 142 (433)
Q Consensus 138 ll~~~ 142 (433)
++-..
T Consensus 214 v~DD~ 218 (257)
T 3tos_A 214 AFDEL 218 (257)
T ss_dssp EESST
T ss_pred EEcCC
Confidence 88664
No 325
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.71 E-value=0.084 Score=51.33 Aligned_cols=101 Identities=22% Similarity=0.201 Sum_probs=63.2
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC---Ccc----c
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD---QNL----E 98 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~---~~l----~ 98 (433)
.....+++.+||-+|+|. |..+..+ ++.. +..+|+++|.++..++.+++.- .. .++ |... ... .
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiql-ak~~--Ga~~Vi~~~~~~~~~~~a~~lG-a~--~vi--~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLV-AKAM--GAAQVVVTDLSATRLSKAKEIG-AD--LVL--QISKESPQEIARKVE 236 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHH-HHHT--TCSEEEEEESCHHHHHHHHHTT-CS--EEE--ECSSCCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHH-HHHc--CCCEEEEECCCHHHHHHHHHhC-CC--EEE--cCcccccchHHHHHH
Confidence 445668899999999865 5555333 3332 3138999999999999988642 11 222 2220 001 1
Q ss_pred ccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
......+|+|+-.-.- ...+....++|+|||+++...
T Consensus 237 ~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 237 GQLGCKPEVTIECTGA------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHTSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHhCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEe
Confidence 1011469999875542 235677889999999988753
No 326
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.61 E-value=0.16 Score=49.36 Aligned_cols=105 Identities=17% Similarity=0.146 Sum_probs=64.8
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccc----c-c
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLE----S-I 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~----~-~ 100 (433)
.....++|.+||=+|+|. |..+.. +++.. +...|+++|.+++.++.+++. ...-+.+...+.....+. . .
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~--Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITML-CAKAA--GACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHH-HHHHT--TCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHT
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHH-HHHHc--CCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHh
Confidence 556678899999999864 444433 33332 212499999999999999987 323233221111000011 1 0
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+|+|+-.-.- ...+....++|++||++++..
T Consensus 249 ~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 249 GGIEPAVALECTGV------ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SSCCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEc
Confidence 12469999875541 335778889999999998764
No 327
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.54 E-value=0.13 Score=49.49 Aligned_cols=107 Identities=14% Similarity=0.091 Sum_probs=63.6
Q ss_pred HHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-cccCc
Q psy11646 26 IDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-IFLAK 104 (433)
Q Consensus 26 ~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-~~~~~ 104 (433)
++....+++.+||=+|+|++......+++.. ++.+|+++|.+++-++.+++.-...-+.....|..+. ... .....
T Consensus 156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~--~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~-v~~~t~g~g 232 (348)
T 4eez_A 156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNV--FGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDE-IKKITGGLG 232 (348)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHT--SCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHH-HHHHTTSSC
T ss_pred ecccCCCCCCEEEEEcCCCccHHHHHHHHHh--CCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHH-hhhhcCCCC
Confidence 3445567899999999987654433333332 2359999999999988888763111111111111110 111 11234
Q ss_pred EeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+|.++.... -...+....+.|+++|++++..
T Consensus 233 ~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 233 VQSAIVCAV------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEEEECCS------CHHHHHHHHHTEEEEEEEEECC
T ss_pred ceEEEEecc------CcchhheeheeecCCceEEEEe
Confidence 676665433 2456778889999999988754
No 328
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.04 E-value=0.051 Score=52.75 Aligned_cols=101 Identities=11% Similarity=0.113 Sum_probs=63.9
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----c-
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----I- 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~- 100 (433)
+....+++.+||=+|+|. |..+.. +++.. +..+|+++|.+++.++.+++.- .. .+ .|..+..+.+ .
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~q-la~~~--Ga~~Vi~~~~~~~~~~~~~~lG-a~--~v--i~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVA-GANHL--GAGRIFAVGSRKHCCDIALEYG-AT--DI--INYKNGDIVEQILKAT 231 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHH-HHHTT--TCSSEEEECCCHHHHHHHHHHT-CC--EE--ECGGGSCHHHHHHHHT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHH-HHHHc--CCcEEEEECCCHHHHHHHHHhC-Cc--eE--EcCCCcCHHHHHHHHc
Confidence 556678899999999865 444433 33332 3237999999999999998762 11 11 2222211111 1
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+|+|+-.-.- ...+....+.|+|||+++...
T Consensus 232 ~g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 232 DGKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEec
Confidence 11369999875442 235777889999999988764
No 329
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=92.88 E-value=0.28 Score=47.30 Aligned_cols=72 Identities=8% Similarity=0.023 Sum_probs=52.0
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEccc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFYC 113 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~ 113 (433)
+.+++|+.||.|.++..+.. .+...+.++|+++.+++..+.++.... ..|+.+..... ...+|+|+....
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~----aG~~~v~~~e~d~~a~~t~~~N~~~~~----~~Di~~~~~~~--~~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALES----CGAECVYSNEWDKYAQEVYEMNFGEKP----EGDITQVNEKT--IPDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHH----TTCEEEEEECCCHHHHHHHHHHHSCCC----BSCGGGSCGGG--SCCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHH----CCCeEEEEEeCCHHHHHHHHHHcCCCC----cCCHHHcCHhh--CCCCCEEEECCC
Confidence 57999999999999855543 344568999999999999999873221 57887643221 135899998655
Q ss_pred cc
Q psy11646 114 LH 115 (433)
Q Consensus 114 l~ 115 (433)
..
T Consensus 81 CQ 82 (327)
T 2c7p_A 81 CQ 82 (327)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 330
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.69 E-value=0.18 Score=48.89 Aligned_cols=100 Identities=21% Similarity=0.133 Sum_probs=62.7
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC-Ccccc----c
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD-QNLES----I 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~-~~l~~----~ 100 (433)
...+.+++.+||-+|+|. |..+..+++ . .+ .+|+++|.+++.++.+++.- .. .. .|..+ ....+ .
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~-~--~G-a~Vi~~~~~~~~~~~~~~lG-a~--~~--~~~~~~~~~~~~i~~~ 232 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAK-A--YG-AFVVCTARSPRRLEVAKNCG-AD--VT--LVVDPAKEEESSIIER 232 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHH-H--TT-CEEEEEESCHHHHHHHHHTT-CS--EE--EECCTTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHH-H--cC-CEEEEEcCCHHHHHHHHHhC-CC--EE--EcCcccccHHHHHHHH
Confidence 445667899999999864 444433333 2 23 47999999999999988642 11 11 22221 11111 1
Q ss_pred c----cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 F----LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~----~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
. ...+|+|+-.-.- ...+....+.|+++|+++...
T Consensus 233 ~~~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 233 IRSAIGDLPNVTIDCSGN------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHHSSSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECS
T ss_pred hccccCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 1 2469999875542 235677889999999988753
No 331
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.61 E-value=0.24 Score=47.52 Aligned_cols=55 Identities=16% Similarity=0.237 Sum_probs=42.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH 80 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~ 80 (433)
.+++.++.... ++|..|||.-||+|..+..... + + .+++|+|+++..++.|++++
T Consensus 240 ~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~-~---g-r~~ig~e~~~~~~~~~~~r~ 294 (323)
T 1boo_A 240 KLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAER-E---S-RKWISFEMKPEYVAASAFRF 294 (323)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHH-T---T-CEEEEEESCHHHHHHHHGGG
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHH-c---C-CCEEEEeCCHHHHHHHHHHH
Confidence 45666665543 6799999999999998843332 2 2 48999999999999999987
No 332
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.29 E-value=0.12 Score=49.48 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=63.0
Q ss_pred HhcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC-Ccccc----
Q psy11646 27 DQFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD-QNLES---- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~-~~l~~---- 99 (433)
+....+++.+||-.|++ .|..+..+++. .+ .+|+++|.+++.++.+++. +. . ...|..+ .....
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~---~G-~~V~~~~~~~~~~~~~~~~-g~---~-~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKL---KG-CKVVGAAGSDEKIAYLKQI-GF---D-AAFNYKTVNSLEEALKK 209 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHH---TT-CEEEEEESSHHHHHHHHHT-TC---S-EEEETTSCSCHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHH---CC-CEEEEEeCCHHHHHHHHhc-CC---c-EEEecCCHHHHHHHHHH
Confidence 44556789999999983 44444333332 23 5899999999999888543 21 1 1234433 21211
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+.+|+++.+..- ..+....+.|++||++++..
T Consensus 210 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 210 ASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred HhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEEe
Confidence 112479999877652 24677889999999988753
No 333
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.16 E-value=0.26 Score=47.36 Aligned_cols=104 Identities=14% Similarity=0.113 Sum_probs=65.6
Q ss_pred HHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-----
Q psy11646 25 YIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----- 99 (433)
Q Consensus 25 l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----- 99 (433)
........++.+||=.|+|........+++... ...++++|.+++-++.|++.- ....+ |..+....+
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G--~~~vi~~~~~~~k~~~a~~lG---a~~~i--~~~~~~~~~~~~~~ 224 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALG--AKSVTAIDISSEKLALAKSFG---AMQTF--NSSEMSAPQMQSVL 224 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTT---CSEEE--ETTTSCHHHHHHHH
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcC--CcEEEEEechHHHHHHHHHcC---CeEEE--eCCCCCHHHHHHhh
Confidence 345556678999999999765544344444433 247899999999999998752 11222 222221111
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.....+|+|+-.-. ....+....++|++||.+++..
T Consensus 225 ~~~~g~d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 225 RELRFNQLILETAG------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp GGGCSSEEEEECSC------SHHHHHHHHHHCCTTCEEEECC
T ss_pred cccCCccccccccc------ccchhhhhhheecCCeEEEEEe
Confidence 11245788776543 2346777889999999988764
No 334
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.13 E-value=0.4 Score=46.26 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=62.1
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcE
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
...+.+++.+||-+|+|. |..+..++ +.. + .+|+++|.+++.++.+++. +.. .++ .+... +. ..+
T Consensus 170 ~~~~~~~g~~VlV~GaG~vG~~a~qla-~~~--G-a~Vi~~~~~~~~~~~~~~l-Ga~--~v~-~~~~~--~~----~~~ 235 (348)
T 3two_A 170 KFSKVTKGTKVGVAGFGGLGSMAVKYA-VAM--G-AEVSVFARNEHKKQDALSM-GVK--HFY-TDPKQ--CK----EEL 235 (348)
T ss_dssp HHTTCCTTCEEEEESCSHHHHHHHHHH-HHT--T-CEEEEECSSSTTHHHHHHT-TCS--EEE-SSGGG--CC----SCE
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHH-HHC--C-CeEEEEeCCHHHHHHHHhc-CCC--eec-CCHHH--Hh----cCC
Confidence 344667899999999865 44443333 332 3 5899999999999998874 222 222 22111 11 379
Q ss_pred eEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 106 NKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 106 D~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
|+|+-.-.-. ..+....+.|+|+|++++..
T Consensus 236 D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 236 DFIISTIPTH------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEEEECCCSC------CCHHHHHTTEEEEEEEEECC
T ss_pred CEEEECCCcH------HHHHHHHHHHhcCCEEEEEC
Confidence 9998755422 14567789999999988764
No 335
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=91.94 E-value=0.51 Score=51.44 Aligned_cols=105 Identities=23% Similarity=0.207 Sum_probs=87.9
Q ss_pred HHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC--HHHHHHHHhcccceeEE
Q psy11646 194 FSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN--VVCLETKFQIFFENVSI 271 (433)
Q Consensus 194 l~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~--~~~~~~~l~~~F~~v~~ 271 (433)
...+...-+.+|.||.---+.|-.+++ ...+.+.+.+..+.+....||.+|+|+=--.. +..+.++...+|....+
T Consensus 563 ~~p~pTGtf~fVYSDvDQV~dgg~Dl~--Aasr~~~~~l~~~l~~tt~GG~~VvKiNFPT~~~W~~lf~~~~~~~~s~~l 640 (1289)
T 1ej6_A 563 ARPFPSGDYQFVYSDVDQVVDGHDDLS--ISSGLVESLLSSCMHATAPGGSFVVKINFPTRPVWHYIEQKILPNITSYML 640 (1289)
T ss_dssp TSCCSCCCEEEEEECCCCCCSSSTTHH--HHHHHHHHHHHHHHHHEEEEEEEEEEESSCCHHHHHHHHHHTGGGEEEEEE
T ss_pred eccCCCcceEEEEechhhhhcCCCcch--hhHHHHHHHHHHHHHhhccCceEEEEEcCCChHHHHHHHHhhccccceeee
Confidence 344566778999999999988887776 45678889999999999999999999954443 67899999999999999
Q ss_pred ecCCCCcccccceeEEEeeccCCCCCCCCcc
Q psy11646 272 AKPKSSRNSSIESFIVCQNYRPPKDYVPTIM 302 (433)
Q Consensus 272 ~KP~~sr~~s~E~~~v~~~~~~~~~~~~~~~ 302 (433)
.||-= ..|.|+|+||.++.....+.|+..
T Consensus 641 vKP~I--vNnvEvflv~~~r~~~g~l~~t~~ 669 (1289)
T 1ej6_A 641 IKPFV--TNNVELFFVAFGVHQHSSLTWTSG 669 (1289)
T ss_dssp EEEES--SSSCCEEEEEEEESCCCCCCBCHH
T ss_pred eccee--ecceEEEEEEEeeecCCCCCCchh
Confidence 99964 478999999999997777777654
No 336
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.91 E-value=0.13 Score=49.52 Aligned_cols=100 Identities=12% Similarity=0.132 Sum_probs=64.1
Q ss_pred HhcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----c
Q psy11646 27 DQFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----I 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~ 100 (433)
+....+++.+||-.|++ .|..+..+++ . .+ .+|++++.+++.++.+.+.++.. . ..|..+..+.. .
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~-~--~G-a~Vi~~~~~~~~~~~~~~~~g~~--~--~~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIAR-L--KG-CRVVGIAGGAEKCRFLVEELGFD--G--AIDYKNEDLAAGLKRE 214 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHH-H--TT-CEEEEEESSHHHHHHHHHTTCCS--E--EEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHH-H--CC-CEEEEEeCCHHHHHHHHHHcCCC--E--EEECCCHHHHHHHHHh
Confidence 55567889999999983 3445433333 2 23 59999999999999884444221 1 12333222211 1
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
..+.+|+|+.+-.- ..+....+.|+++|++++..
T Consensus 215 ~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 215 CPKGIDVFFDNVGG-------EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp CTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred cCCCceEEEECCCc-------chHHHHHHHHhhCCEEEEEe
Confidence 12569999876551 36778889999999988753
No 337
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=91.76 E-value=0.42 Score=45.99 Aligned_cols=79 Identities=14% Similarity=0.107 Sum_probs=54.2
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEE-EEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKL-VGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSF 111 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v-~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~ 111 (433)
...+++|+-||.|.++..+...-++ ...+ .++|+++.+.+..+.++... +...|+.+..........+|+++..
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~--~~~v~~a~e~d~~a~~ty~~N~~~~---~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSIN--INATFIPFDINEIANKIYSKNFKEE---VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCC--CCEEEEEECCCHHHHHHHHHHHCCC---CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCC--ceEEEEEEECCHHHHHHHHHHCCCC---cccCChhhcCHHHhccCCCCEEEec
Confidence 3568999999999998444331111 1356 79999999999999987322 5678888764332222468999987
Q ss_pred ccccc
Q psy11646 112 YCLHW 116 (433)
Q Consensus 112 ~~l~~ 116 (433)
.....
T Consensus 84 pPCQ~ 88 (327)
T 3qv2_A 84 PPCQP 88 (327)
T ss_dssp CCCTT
T ss_pred CCccC
Confidence 66443
No 338
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.72 E-value=0.091 Score=50.70 Aligned_cols=101 Identities=12% Similarity=0.110 Sum_probs=62.9
Q ss_pred HHHhcCCCCCCEEEEECCCC--ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc---
Q psy11646 25 YIDQFKWTDNESVLDVGCGP--GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES--- 99 (433)
Q Consensus 25 l~~~l~~~~~~~VLDIGcG~--G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~--- 99 (433)
+.+....+++.+||-+|+|. |..+..+++. .+ .+|+++|.+++.++.+++.- .. .. .|..+..+.+
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~---~G-a~Vi~~~~~~~~~~~~~~lg-a~--~~--~~~~~~~~~~~~~ 206 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQI---LN-FRLIAVTRNNKHTEELLRLG-AA--YV--IDTSTAPLYETVM 206 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHH---HT-CEEEEEESSSTTHHHHHHHT-CS--EE--EETTTSCHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHH---cC-CEEEEEeCCHHHHHHHHhCC-Cc--EE--EeCCcccHHHHHH
Confidence 34556678899999999874 5555344332 23 58999999999999888752 11 11 2332222211
Q ss_pred -c-ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 -I-FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 -~-~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
. ....+|+|+-+-.-. ......+.|++||+++...
T Consensus 207 ~~~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 207 ELTNGIGADAAIDSIGGP-------DGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp HHTTTSCEEEEEESSCHH-------HHHHHHHTEEEEEEEEECC
T ss_pred HHhCCCCCcEEEECCCCh-------hHHHHHHHhcCCCEEEEEe
Confidence 1 124799998765522 1233458999999988764
No 339
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.57 E-value=0.57 Score=44.93 Aligned_cols=99 Identities=13% Similarity=0.130 Sum_probs=63.4
Q ss_pred HhcCCCCCCEEEEECC--CCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCC-cccc----
Q psy11646 27 DQFKWTDNESVLDVGC--GPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQ-NLES---- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGc--G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~-~l~~---- 99 (433)
+....+++.+||-.|+ |.|..+..+++. .+ .+|++++.+++.++.+++.++.. . ..|..+. .+..
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~---~G-~~V~~~~~~~~~~~~~~~~~g~~--~--~~d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKM---MG-CYVVGSAGSKEKVDLLKTKFGFD--D--AFNYKEESDLTAALKR 220 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHH---TT-CEEEEEESSHHHHHHHHHTSCCS--E--EEETTSCSCSHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHH---CC-CEEEEEeCCHHHHHHHHHHcCCc--e--EEecCCHHHHHHHHHH
Confidence 4456678999999997 344444333332 23 58999999999999887544221 1 1243321 1111
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
...+.+|+|+.+-.- ..+....+.|++||++++.
T Consensus 221 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 221 CFPNGIDIYFENVGG-------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred HhCCCCcEEEECCCH-------HHHHHHHHHHhcCCEEEEE
Confidence 112469999876552 3677888999999998875
No 340
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=91.54 E-value=1 Score=44.36 Aligned_cols=84 Identities=10% Similarity=0.134 Sum_probs=53.0
Q ss_pred hcCCCCCCEEEEECCCCChhHHHHhcccC--CC--CCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCccccccc
Q psy11646 28 QFKWTDNESVLDVGCGPGNVTSKLLLPNL--PK--SVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLESIFL 102 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG~G~~~~~~l~~~~--~~--~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~~~~ 102 (433)
.+..+...+|+|+|+|.|.++..+|.... +. ...+|+.+|+|+...+.-++++ ...++.|.. ++.+. +.
T Consensus 75 ~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~W~~-~l~~l--p~--- 148 (387)
T 1zkd_A 75 AADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHD-SFEDV--PE--- 148 (387)
T ss_dssp HTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEES-SGGGS--CC---
T ss_pred HcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeEEeC-Chhhc--CC---
Confidence 44444456899999999999877765432 10 1148999999999888766666 222466542 23332 21
Q ss_pred CcEeEEEEcccccchh
Q psy11646 103 AKFNKIFSFYCLHWVQ 118 (433)
Q Consensus 103 ~~fD~Vis~~~l~~~~ 118 (433)
+ .=+|+++..+..++
T Consensus 149 ~-~~~viANE~fDAlP 163 (387)
T 1zkd_A 149 G-PAVILANEYFDVLP 163 (387)
T ss_dssp S-SEEEEEESSGGGSC
T ss_pred C-CeEEEeccccccCc
Confidence 2 34778887776553
No 341
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.50 E-value=0.13 Score=48.70 Aligned_cols=58 Identities=16% Similarity=0.278 Sum_probs=41.1
Q ss_pred CCeEEEEecccCCcccccccCcEeEEEEcccccch--------------------hhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 83 PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHWV--------------------QDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 83 ~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~--------------------~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.++.++++|..+. +....+++||+|+++...... ......++++.++|+|||.+++..
T Consensus 20 ~~~~i~~gD~~~~-l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREV-LASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHH-HTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHH-HhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4578899998652 222234799999998876421 123457889999999999998864
No 342
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.46 E-value=0.4 Score=46.77 Aligned_cols=99 Identities=20% Similarity=0.226 Sum_probs=61.2
Q ss_pred hcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEe
Q psy11646 28 QFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFN 106 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD 106 (433)
....+++.+||-+|+|. |..+..++ +. .+ .+|+++|.+++.++.+++. +.. .+ .|..+........+.+|
T Consensus 189 ~~~~~~g~~VlV~GaG~vG~~aiqla-k~--~G-a~Vi~~~~~~~~~~~a~~l-Ga~--~v--i~~~~~~~~~~~~~g~D 259 (369)
T 1uuf_A 189 HWQAGPGKKVGVVGIGGLGHMGIKLA-HA--MG-AHVVAFTTSEAKREAAKAL-GAD--EV--VNSRNADEMAAHLKSFD 259 (369)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHH-HH--TT-CEEEEEESSGGGHHHHHHH-TCS--EE--EETTCHHHHHTTTTCEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHH-HH--CC-CEEEEEeCCHHHHHHHHHc-CCc--EE--eccccHHHHHHhhcCCC
Confidence 34567899999999874 44443333 32 23 5899999999999998874 211 11 12221111111115799
Q ss_pred EEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 107 KIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 107 ~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+|+-.-.-. ..+....+.|+++|+++...
T Consensus 260 vvid~~g~~------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 260 FILNTVAAP------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEEECCSSC------CCHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCCH------HHHHHHHHHhccCCEEEEec
Confidence 998765422 13556778999999988753
No 343
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=91.43 E-value=0.31 Score=48.48 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=45.9
Q ss_pred CCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-C-----C-CCeEEEEeccc
Q psy11646 31 WTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-T-----N-PKLEFVVANIA 93 (433)
Q Consensus 31 ~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~-----~-~~i~~~~~Di~ 93 (433)
.+++..|+||||+.|.++..++++..+.. .+|+++|++|...+..+++. . . .+++++..-+.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~-~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKF-ERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCC-SEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCC-CEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 46889999999999999955443444432 49999999999999998876 2 2 56666555443
No 344
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.07 E-value=0.24 Score=48.33 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=62.5
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC--Ccccc----
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD--QNLES---- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~--~~l~~---- 99 (433)
+....+++.+||-+|+|. |..+.. +++.. +..+|+++|.+++.++.+++. +.. .+ .|..+ ..+.+
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~q-la~~~--Ga~~Vi~~~~~~~~~~~~~~l-Ga~--~v--i~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIM-GCKAA--GAARIIGVDINKDKFAKAKEV-GAT--EC--VNPQDYKKPIQEVLTE 256 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHH-HHHHT--TCSEEEEECSCGGGHHHHHHT-TCS--EE--ECGGGCSSCHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHH-HHHHc--CCCeEEEEcCCHHHHHHHHHh-CCc--eE--ecccccchhHHHHHHH
Confidence 445667899999999764 444433 33332 313899999999999998764 211 11 23221 11111
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCC-CEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPG-GEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpG-G~lll~~ 141 (433)
...+.+|+|+-.-.- ...+....++|+++ |++++..
T Consensus 257 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 257 MSNGGVDFSFEVIGR------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HTTSCBSEEEECSCC------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HhCCCCcEEEECCCC------HHHHHHHHHHhhcCCcEEEEec
Confidence 112469999875542 34577888999999 9988753
No 345
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.86 E-value=0.12 Score=50.36 Aligned_cols=99 Identities=9% Similarity=0.070 Sum_probs=62.4
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----c-
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----I- 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~- 100 (433)
+....+++.+||=+|+|. |..+..+ ++. .+ .+++++|.+++.++.+++.- . -..+ |-....+.+ .
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~ql-a~~--~G-a~Vi~~~~~~~~~~~~~~lG-a--~~vi--~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQI-AKA--TG-AEVIVTSSSREKLDRAFALG-A--DHGI--NRLEEDWVERVYALT 253 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHH-HHH--TT-CEEEEEESCHHHHHHHHHHT-C--SEEE--ETTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHH-HHH--cC-CEEEEEecCchhHHHHHHcC-C--CEEE--cCCcccHHHHHHHHh
Confidence 455667899999999765 4444333 333 23 59999999999999988752 1 1222 211111111 1
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+|+|+-.-.- ..+....+.|+|||++++..
T Consensus 254 ~g~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 254 GDRGADHILEIAGG-------AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp TTCCEEEEEEETTS-------SCHHHHHHHEEEEEEEEEEC
T ss_pred CCCCceEEEECCCh-------HHHHHHHHHhhcCCEEEEEe
Confidence 12379999876551 24567788999999988764
No 346
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=90.84 E-value=1.1 Score=49.39 Aligned_cols=101 Identities=17% Similarity=0.109 Sum_probs=79.5
Q ss_pred HhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEee-cCC-HHHHHHHHhcccceeEEe
Q psy11646 195 SHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFR-SRN-VVCLETKFQIFFENVSIA 272 (433)
Q Consensus 195 ~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~-g~~-~~~~~~~l~~~F~~v~~~ 272 (433)
.-+...-+.+|.||.---..|-.+++ .+.+++.+.+..+.+....||.+|+|+=- ... +..+..++..+|..+.++
T Consensus 568 ~p~pTGtf~fVYSDVDQV~d~~~Dl~--As~r~~~~~l~~~l~~ts~GG~~v~KiNFPT~~vw~~if~~~~~~~~~~~i~ 645 (1299)
T 3iyl_W 568 RAVPTGTFGLVYADLDQVEDAGTDMP--AANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHATTLHLV 645 (1299)
T ss_dssp SCCCCCCEEEEEECCCCC-----CCH--HHHHHHHHHHHHHHHHEEEEEEEEEEESCCCTTHHHHHHHHTTTTCSCEEEE
T ss_pred ccCCCCceEEEEecchhhccCCcchh--hhhHHHHHHHHHHHHhhcCCceEEEEEcCCchHHHHHHHHHhcchhheeeee
Confidence 34556678999999988888877776 45678888899999999999999999944 444 679999999999999999
Q ss_pred cCCCCcccccceeEEEeeccCCCCCCC
Q psy11646 273 KPKSSRNSSIESFIVCQNYRPPKDYVP 299 (433)
Q Consensus 273 KP~~sr~~s~E~~~v~~~~~~~~~~~~ 299 (433)
||-= ..|.|+|+|..+......+.|
T Consensus 646 KPli--~NnvEvf~v~~~r~~~~~l~~ 670 (1299)
T 3iyl_W 646 KPTI--VNSSEVFLVFGGRQSNGALRS 670 (1299)
T ss_dssp ECCS--SSCCCEEEEESCCCTTCCCCC
T ss_pred ccee--ecceEEEEEEeeecccCCCCC
Confidence 9975 478999999988886666665
No 347
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.79 E-value=0.47 Score=45.62 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=61.0
Q ss_pred CCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC-Cc-ccccc-cCcE
Q psy11646 30 KWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD-QN-LESIF-LAKF 105 (433)
Q Consensus 30 ~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~-~~-l~~~~-~~~f 105 (433)
.. ++.+||-+|+|. |..+..+++...+ + .+|+++|.+++.++.+++.- .. .++ |..+ .. ..... ...+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~-G-a~Vi~~~~~~~~~~~~~~lG-a~--~vi--~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMK-N-ITIVGISRSKKHRDFALELG-AD--YVS--EMKDAESLINKLTDGLGA 239 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCT-T-CEEEEECSCHHHHHHHHHHT-CS--EEE--CHHHHHHHHHHHHTTCCE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcC-C-CEEEEEeCCHHHHHHHHHhC-CC--EEe--ccccchHHHHHhhcCCCc
Confidence 55 899999999864 4444333332211 3 58999999999999988752 11 111 2111 00 11111 1379
Q ss_pred eEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 106 NKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 106 D~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
|+|+-.-.- ...+....++|+++|+++...
T Consensus 240 D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 240 SIAIDLVGT------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEESSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred cEEEECCCC------hHHHHHHHHHhhcCCEEEEeC
Confidence 999876542 236778889999999988753
No 348
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.49 E-value=0.4 Score=46.01 Aligned_cols=55 Identities=13% Similarity=0.237 Sum_probs=42.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCH---HHHHHHHhhc
Q psy11646 20 KLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSP---NMIKHAKNHH 80 (433)
Q Consensus 20 ~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~---~~l~~A~~~~ 80 (433)
.+++.++.... .++..|||.-||+|..+...+. + + .+++|+|+++ ..++.|++++
T Consensus 230 ~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~-~---~-r~~ig~e~~~~~~~~~~~~~~Rl 287 (319)
T 1eg2_A 230 AVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQ-E---G-RNSICTDAAPVFKEYYQKQLTFL 287 (319)
T ss_dssp HHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHH-H---T-CEEEEEESSTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHH-c---C-CcEEEEECCccHHHHHHHHHHHH
Confidence 45566665543 6799999999999998844432 2 2 4899999999 9999999997
No 349
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.46 E-value=0.16 Score=49.13 Aligned_cols=100 Identities=11% Similarity=0.102 Sum_probs=63.3
Q ss_pred HhcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC-Ccccc----
Q psy11646 27 DQFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD-QNLES---- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~-~~l~~---- 99 (433)
.....+++.+||-+|++ .|..+..+++. .+ .+|+++|.+++.++.+++. + .. ...|..+ ..+..
T Consensus 163 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~---~G-a~V~~~~~~~~~~~~~~~~-g---~~-~~~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 163 KSANLMAGHWVAISGAAGGLGSLAVQYAKA---MG-YRVLGIDGGEGKEELFRSI-G---GE-VFIDFTKEKDIVGAVLK 233 (347)
T ss_dssp HTTTCCTTCEEEEETTTSHHHHHHHHHHHH---TT-CEEEEEECSTTHHHHHHHT-T---CC-EEEETTTCSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHH---CC-CcEEEEcCCHHHHHHHHHc-C---Cc-eEEecCccHhHHHHHHH
Confidence 33456789999999983 45554333332 23 5899999999888888764 2 11 1225431 11211
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+.+|+|+.+... ...++...+.|+++|+++...
T Consensus 234 ~~~~~~D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 234 ATDGGAHGVINVSVS------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHTSCEEEEEECSSC------HHHHHHHTTSEEEEEEEEECC
T ss_pred HhCCCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEEe
Confidence 111369999876552 246788889999999988753
No 350
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.39 E-value=0.23 Score=47.85 Aligned_cols=97 Identities=13% Similarity=0.221 Sum_probs=62.3
Q ss_pred CCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----c-ccC
Q psy11646 30 KWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----I-FLA 103 (433)
Q Consensus 30 ~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~-~~~ 103 (433)
..+++.+||=+|+|. |..+..+++ .. ++.+|+++|.+++-++.+++.- .. .++ |..+. ..+ . ...
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~-~~--g~~~Vi~~~~~~~~~~~~~~lG-a~--~~i--~~~~~-~~~~v~~~t~g~ 238 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILR-AV--SAARVIAVDLDDDRLALAREVG-AD--AAV--KSGAG-AADAIRELTGGQ 238 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHH-HH--CCCEEEEEESCHHHHHHHHHTT-CS--EEE--ECSTT-HHHHHHHHHGGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-Hc--CCCEEEEEcCCHHHHHHHHHcC-CC--EEE--cCCCc-HHHHHHHHhCCC
Confidence 457899999999865 445533333 32 2359999999999999998752 11 122 11111 111 1 113
Q ss_pred cEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+|+|+-.-.- ...+....+.|+++|++++..
T Consensus 239 g~d~v~d~~G~------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 239 GATAVFDFVGA------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp CEEEEEESSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred CCeEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 79999875542 346788899999999988763
No 351
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=90.35 E-value=0.38 Score=46.46 Aligned_cols=78 Identities=13% Similarity=0.065 Sum_probs=53.8
Q ss_pred CEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEcccc
Q psy11646 35 ESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFYCL 114 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l 114 (433)
.+++|+-||.|.++..+.. .. -....+.++|+++.+.+..+.++ +...+...|+.+....+.....+|+++.....
T Consensus 4 ~~~idLFaG~GG~~~G~~~-aG-~~~~~v~a~e~d~~a~~ty~~N~--~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPC 79 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKE-SG-LDGEIVAAVDINTVANSVYKHNF--PETNLLNRNIQQLTPQVIKKWNVDTILMSPPC 79 (333)
T ss_dssp EEEEEETCTTTHHHHHHHH-HT-CSEEEEEEECCCHHHHHHHHHHC--TTSCEECCCGGGCCHHHHHHTTCCEEEECCCC
T ss_pred CEEEEECcCccHHHHHHHH-cC-CCceEEEEEeCCHHHHHHHHHhC--CCCceeccccccCCHHHhccCCCCEEEecCCC
Confidence 4799999999999844432 21 11135889999999999999987 34456778888754332222468999886655
Q ss_pred cc
Q psy11646 115 HW 116 (433)
Q Consensus 115 ~~ 116 (433)
..
T Consensus 80 Q~ 81 (333)
T 4h0n_A 80 QP 81 (333)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 352
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=89.92 E-value=0.71 Score=44.28 Aligned_cols=98 Identities=18% Similarity=0.245 Sum_probs=62.3
Q ss_pred cCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccc---cCc
Q psy11646 29 FKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIF---LAK 104 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~---~~~ 104 (433)
...+++.+||-+|+|. |..+..+++ . .+ .+|+++|.+++.++.+++. +. .. ..|..+..+.+.. .+.
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~-~--~G-a~Vi~~~~~~~~~~~~~~l-Ga---~~-~~d~~~~~~~~~~~~~~~~ 230 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAK-A--MG-LNVVAVDIGDEKLELAKEL-GA---DL-VVNPLKEDAAKFMKEKVGG 230 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHH-H--TT-CEEEEECSCHHHHHHHHHT-TC---SE-EECTTTSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHH-H--cC-CEEEEEeCCHHHHHHHHHC-CC---CE-EecCCCccHHHHHHHHhCC
Confidence 3567899999999853 444433332 2 23 5999999999999988763 21 11 2344322221100 146
Q ss_pred EeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+|+|+..-.. ...+....++|+++|+++...
T Consensus 231 ~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 231 VHAAVVTAVS------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEEEEESSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCC------HHHHHHHHHHhhcCCEEEEec
Confidence 9999876542 245778889999999988753
No 353
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=89.85 E-value=1.2 Score=42.07 Aligned_cols=77 Identities=13% Similarity=0.037 Sum_probs=53.9
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcE--EEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccc-cCcEeEEE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVK--LVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIF-LAKFNKIF 109 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~--v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~-~~~fD~Vi 109 (433)
.+.+++|+-||.|.++..+.. .+... +.++|+++.+.+..+.++ +...+...|+.+....... .+.+|+++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~----aG~~~~~v~a~E~d~~a~~ty~~N~--~~~~~~~~DI~~i~~~~i~~~~~~Dll~ 88 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKD----LGIQVDRYIASEVCEDSITVGMVRH--QGKIMYVGDVRSVTQKHIQEWGPFDLVI 88 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHH----TTBCEEEEEEECCCHHHHHHHHHHT--TTCEEEECCGGGCCHHHHHHTCCCSEEE
T ss_pred CCCEEEEeCcCccHHHHHHHH----CCCccceEEEEECCHHHHHHHHHhC--CCCceeCCChHHccHHHhcccCCcCEEE
Confidence 467899999999999844433 23223 699999999999888876 3456788999875322211 14689999
Q ss_pred Eccccc
Q psy11646 110 SFYCLH 115 (433)
Q Consensus 110 s~~~l~ 115 (433)
......
T Consensus 89 ggpPCQ 94 (295)
T 2qrv_A 89 GGSPCN 94 (295)
T ss_dssp ECCCCG
T ss_pred ecCCCc
Confidence 865443
No 354
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=89.66 E-value=0.63 Score=44.78 Aligned_cols=100 Identities=16% Similarity=0.232 Sum_probs=62.8
Q ss_pred hcCCCCCCEEEEECCCCC--hhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc----cccc
Q psy11646 28 QFKWTDNESVLDVGCGPG--NVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL----ESIF 101 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG~G--~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l----~~~~ 101 (433)
..+.+++.+||-.|+|+| ..+..+++.. . + .+|+++|.+++.++.+++. +.. .+ .|..+... ....
T Consensus 165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~-~-G-a~Vi~~~~~~~~~~~~~~~-g~~--~~--~~~~~~~~~~~~~~~~ 236 (347)
T 1jvb_A 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAV-S-G-ATIIGVDVREEAVEAAKRA-GAD--YV--INASMQDPLAEIRRIT 236 (347)
T ss_dssp HTTCCTTCEEEEETTTSHHHHHHHHHHHHH-T-C-CEEEEEESSHHHHHHHHHH-TCS--EE--EETTTSCHHHHHHHHT
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHc-C-C-CeEEEEcCCHHHHHHHHHh-CCC--EE--ecCCCccHHHHHHHHh
Confidence 355678999999999744 3443333321 0 3 5899999999999888764 211 11 23322211 1111
Q ss_pred c-CcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 102 L-AKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 102 ~-~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
. +.+|+|+.+..- ...+....++|+++|++++..
T Consensus 237 ~~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 ESKGVDAVIDLNNS------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTSCEEEEEESCCC------HHHHTTGGGGEEEEEEEEECC
T ss_pred cCCCceEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 1 479999876542 335677889999999988753
No 355
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.58 E-value=0.29 Score=47.44 Aligned_cols=99 Identities=19% Similarity=0.154 Sum_probs=61.9
Q ss_pred HhcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-----
Q psy11646 27 DQFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----- 99 (433)
...+.+++.+||-.|++ .|..+..+++. .+ .+|++++.+++.++.+++.- .. ...|..+....+
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~---~G-a~Vi~~~~~~~~~~~~~~~g----a~-~~~d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARA---YG-LKILGTAGTEEGQKIVLQNG----AH-EVFNHREVNYIDKIKKY 234 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHH---TT-CEEEEEESSHHHHHHHHHTT----CS-EEEETTSTTHHHHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHH---CC-CEEEEEeCChhHHHHHHHcC----CC-EEEeCCCchHHHHHHHH
Confidence 34556789999999973 34444333332 23 58999999999888877642 11 122433221111
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.....+|+|+.+..- ..+....+.|+++|++++..
T Consensus 235 ~~~~~~D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 235 VGEKGIDIIIEMLAN-------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HCTTCEEEEEESCHH-------HHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCcEEEEECCCh-------HHHHHHHHhccCCCEEEEEe
Confidence 012369999876542 24667789999999988753
No 356
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=89.53 E-value=1.3 Score=42.25 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=66.5
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN 254 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~ 254 (433)
+.+..+.+|.. +.+..+....+|+|++|..... +.. .+.. ....+..+.++|++||.|++-.....+
T Consensus 139 ~rv~v~~~Da~------~~l~~~~~~~fDvIi~D~~~~~-~~~--~~L~----t~efl~~~~r~LkpgGvlv~~~~~~~~ 205 (317)
T 3gjy_A 139 PRVKIRVDDAR------MVAESFTPASRDVIIRDVFAGA-ITP--QNFT----TVEFFEHCHRGLAPGGLYVANCGDHSD 205 (317)
T ss_dssp TTEEEEESCHH------HHHHTCCTTCEEEEEECCSTTS-CCC--GGGS----BHHHHHHHHHHEEEEEEEEEEEEECTT
T ss_pred CceEEEECcHH------HHHhhccCCCCCEEEECCCCcc-ccc--hhhh----HHHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 34556666643 3344455678999999974332 111 1111 134566778999999999999887665
Q ss_pred ---HHHHHHHHhcccceeEEec-CCCCcc-cccceeEEEeec
Q psy11646 255 ---VVCLETKFQIFFENVSIAK-PKSSRN-SSIESFIVCQNY 291 (433)
Q Consensus 255 ---~~~~~~~l~~~F~~v~~~K-P~~sr~-~s~E~~~v~~~~ 291 (433)
...+...++..|..|.++. |..++. ...-..++|.+-
T Consensus 206 ~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~As~~ 247 (317)
T 3gjy_A 206 LRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIILMGSDT 247 (317)
T ss_dssp CHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEEEEESS
T ss_pred hHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEEEEECC
Confidence 3577889999999999886 444443 233455666543
No 357
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.63 E-value=0.48 Score=46.03 Aligned_cols=98 Identities=11% Similarity=0.107 Sum_probs=62.2
Q ss_pred hcCCCCCCEEEEECC--CCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----cc
Q psy11646 28 QFKWTDNESVLDVGC--GPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----IF 101 (433)
Q Consensus 28 ~l~~~~~~~VLDIGc--G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~~ 101 (433)
....+++.+||-.|+ |.|..+..+++ . .+ .+|++++.+++.++.+++. +.. .. .|..+..+.+ ..
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~-~--~G-a~Vi~~~~~~~~~~~~~~~-Ga~--~~--~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSK-K--AK-CHVIGTCSSDEKSAFLKSL-GCD--RP--INYKTEPVGTVLKQEY 228 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHH-H--TT-CEEEEEESSHHHHHHHHHT-TCS--EE--EETTTSCHHHHHHHHC
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHH-h--CC-CEEEEEECCHHHHHHHHHc-CCc--EE--EecCChhHHHHHHHhc
Confidence 345678999999993 44555534433 2 23 5899999999988888863 211 11 2322211111 11
Q ss_pred cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 102 LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+|+|+-+-.- ..+....+.|+++|++++..
T Consensus 229 ~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 229 PEGVDVVYESVGG-------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TTCEEEEEECSCT-------HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCH-------HHHHHHHHHHhcCCEEEEEe
Confidence 2469999876552 36778889999999988753
No 358
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=88.63 E-value=0.95 Score=47.87 Aligned_cols=106 Identities=15% Similarity=0.135 Sum_probs=64.2
Q ss_pred CCCEEEEECCCCChhHHHHhccc------C---CCCCcEEEEEeC---CHHHHHHHHhh--------------cC-----
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPN------L---PKSVVKLVGLDV---SPNMIKHAKNH--------------HT----- 81 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~------~---~~~~~~v~gvDi---S~~~l~~A~~~--------------~~----- 81 (433)
+..+|||+|.|+|......+... . +..-.++++++. +++.+..+-.. +.
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 45689999999998764444421 1 111257999998 87777744332 10
Q ss_pred ---------CCCeEEEEecccCCcccccc---cCcEeEEEEcccccch-hh--HHHHHHHHHHhccCCCEEEE
Q psy11646 82 ---------NPKLEFVVANIADQNLESIF---LAKFNKIFSFYCLHWV-QD--QRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 82 ---------~~~i~~~~~Di~~~~l~~~~---~~~fD~Vis~~~l~~~-~d--~~~~l~~i~~~LkpGG~lll 139 (433)
.-.+++..+|+.+. +++.. ...||.++.-..-... ++ ...++..+.++++|||.+.-
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~-l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINEL-TSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHH-GGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHH-HHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 01233555666543 33221 3679999874321111 12 25689999999999998653
No 359
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.43 E-value=2.7 Score=39.92 Aligned_cols=72 Identities=10% Similarity=0.161 Sum_probs=52.4
Q ss_pred CEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEcccc
Q psy11646 35 ESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFYCL 114 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l 114 (433)
++|||+=||.|.++.. +.. .++..+.++|+++.+.+.-+.++. -.+..+|+.+....+ -...|+++.....
T Consensus 1 mkvidLFsG~GG~~~G-~~~---aG~~~v~a~e~d~~a~~ty~~N~~---~~~~~~DI~~i~~~~--~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLG-FQK---AGFRIICANEYDKSIWKTYESNHS---AKLIKGDISKISSDE--FPKCDGIIGGPPS 71 (331)
T ss_dssp CEEEEESCTTCHHHHH-HHH---TTCEEEEEEECCTTTHHHHHHHCC---SEEEESCGGGCCGGG--SCCCSEEECCCCG
T ss_pred CeEEEeCcCccHHHHH-HHH---CCCEEEEEEeCCHHHHHHHHHHCC---CCcccCChhhCCHhh--CCcccEEEecCCC
Confidence 4799999999999844 332 344567899999999999998872 367789998753322 2468999976544
Q ss_pred c
Q psy11646 115 H 115 (433)
Q Consensus 115 ~ 115 (433)
.
T Consensus 72 Q 72 (331)
T 3ubt_Y 72 Q 72 (331)
T ss_dssp G
T ss_pred C
Confidence 3
No 360
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.38 E-value=0.6 Score=45.43 Aligned_cols=101 Identities=15% Similarity=0.196 Sum_probs=62.9
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC--Ccccc----
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD--QNLES---- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~--~~l~~---- 99 (433)
+....+++.+||-+|+|. |..+.. +++.. +..+|+++|.+++.++.+++. +.. .+ .|..+ ..+.+
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~q-la~~~--Ga~~Vi~~~~~~~~~~~~~~l-Ga~--~v--i~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVM-GCHSA--GAKRIIAVDLNPDKFEKAKVF-GAT--DF--VNPNDHSEPISQVLSK 257 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHH-HHHHT--TCSEEEEECSCGGGHHHHHHT-TCC--EE--ECGGGCSSCHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHH-HHHHc--CCCEEEEEcCCHHHHHHHHHh-CCc--eE--EeccccchhHHHHHHH
Confidence 445667899999999764 444433 33332 323899999999999998864 211 11 23321 11111
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCC-CEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPG-GEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpG-G~lll~~ 141 (433)
...+.+|+|+-.-.- ...+....++|+++ |++++..
T Consensus 258 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 258 MTNGGVDFSLECVGN------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCC------HHHHHHHHHHhhcCCcEEEEEc
Confidence 112479999875542 34577888999999 9988753
No 361
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=88.37 E-value=1.4 Score=42.45 Aligned_cols=100 Identities=11% Similarity=0.085 Sum_probs=63.4
Q ss_pred HhcCCCCC--CEEEEECCCC--ChhHHHHhcccCCCCCc-EEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc--
Q psy11646 27 DQFKWTDN--ESVLDVGCGP--GNVTSKLLLPNLPKSVV-KLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-- 99 (433)
Q Consensus 27 ~~l~~~~~--~~VLDIGcG~--G~~~~~~l~~~~~~~~~-~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-- 99 (433)
+....+++ .+||-.|++. |..+..+++ . .+ . +|++++.+++.++.+++.++.. ...|..+.....
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~-~--~G-a~~Vi~~~~~~~~~~~~~~~~g~~----~~~d~~~~~~~~~~ 223 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGH-F--LG-CSRVVGICGTHEKCILLTSELGFD----AAINYKKDNVAEQL 223 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHH-H--TT-CSEEEEEESCHHHHHHHHHTSCCS----EEEETTTSCHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHH-H--CC-CCeEEEEeCCHHHHHHHHHHcCCc----eEEecCchHHHHHH
Confidence 45566788 9999999843 334423333 2 23 5 8999999998888887644221 123443322211
Q ss_pred --cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 --IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 --~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+.+|+|+.+-. ...+....++|++||++++..
T Consensus 224 ~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 224 RESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred HHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEEC
Confidence 11136999987665 146778889999999988753
No 362
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.30 E-value=0.24 Score=47.45 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=61.1
Q ss_pred cCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-----cc
Q psy11646 29 FKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-----IF 101 (433)
Q Consensus 29 l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-----~~ 101 (433)
...+++.+||-+|++ .|..+..+++ . .+ .+|++++.+++.++.+++.- . -.. .|..+..+.+ ..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~-~--~G-a~Vi~~~~~~~~~~~~~~~g-a--~~~--~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLK-M--KG-AHTIAVASTDEKLKIAKEYG-A--EYL--INASKEDILRQVLKFTN 214 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHH-H--TT-CEEEEEESSHHHHHHHHHTT-C--SEE--EETTTSCHHHHHHHHTT
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHH-H--CC-CEEEEEeCCHHHHHHHHHcC-C--cEE--EeCCCchHHHHHHHHhC
Confidence 456789999999953 3444433333 2 23 59999999999999887742 1 111 2322221211 01
Q ss_pred cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 102 LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+|+|+.+-.- ..+....+.|++||+++...
T Consensus 215 ~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 215 GKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp TSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred CCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 2469999876552 24667788999999988754
No 363
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.16 E-value=0.22 Score=47.66 Aligned_cols=99 Identities=17% Similarity=0.163 Sum_probs=62.1
Q ss_pred HhcCCCCCCEEEEECC-C-CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-----
Q psy11646 27 DQFKWTDNESVLDVGC-G-PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGc-G-~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----- 99 (433)
.....+++.+||-.|+ | .|..+..+++ . .+ .+|++++.+++.++.+++.- .. .. .|..+..+.+
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~-~--~G-a~Vi~~~~~~~~~~~~~~~G-a~--~~--~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAK-A--LG-AKLIGTVSSPEKAAHAKALG-AW--ET--IDYSHEDVAKRVLEL 204 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHH-H--HT-CEEEEEESSHHHHHHHHHHT-CS--EE--EETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHH-H--CC-CEEEEEeCCHHHHHHHHHcC-CC--EE--EeCCCccHHHHHHHH
Confidence 3445678999999984 3 3444433333 2 23 58999999999999988652 11 11 2332221211
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.....+|+|+.+-.- ..+....+.|++||++++..
T Consensus 205 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 205 TDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECC
T ss_pred hCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEe
Confidence 112469999976552 24667789999999988764
No 364
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=87.93 E-value=0.32 Score=46.89 Aligned_cols=98 Identities=12% Similarity=0.112 Sum_probs=61.5
Q ss_pred HhcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----c
Q psy11646 27 DQFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----I 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~ 100 (433)
+....+++.+||=.|++ .|..+..+++ . .+ .+|++++.+++.++.+++.- .. .+. |... .+.+ .
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~-~--~G-a~Vi~~~~~~~~~~~~~~~g-a~--~v~--~~~~-~~~~~v~~~ 222 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAK-G--MG-AKVIAVVNRTAATEFVKSVG-AD--IVL--PLEE-GWAKAVREA 222 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHH-H--TT-CEEEEEESSGGGHHHHHHHT-CS--EEE--ESST-THHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHH-H--cC-CEEEEEeCCHHHHHHHHhcC-Cc--EEe--cCch-hHHHHHHHH
Confidence 45566789999999973 3455533333 2 23 59999999999888888752 11 222 2221 1111 1
Q ss_pred c-cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 F-LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~-~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
. ...+|+|+-+-.-. .+....+.|++||++++..
T Consensus 223 ~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 223 TGGAGVDMVVDPIGGP-------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred hCCCCceEEEECCchh-------HHHHHHHhhcCCCEEEEEE
Confidence 1 13699999765532 4667889999999988753
No 365
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=87.82 E-value=0.42 Score=45.98 Aligned_cols=97 Identities=11% Similarity=0.119 Sum_probs=62.2
Q ss_pred cCCCCCCEEEEECC--CCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----cc-
Q psy11646 29 FKWTDNESVLDVGC--GPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----IF- 101 (433)
Q Consensus 29 l~~~~~~~VLDIGc--G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~~- 101 (433)
.+.+++.+||-+|+ |.|..+..+++. .+ .++++++.+++.++.+++. +.. . ..|..+....+ ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~---~G-~~Vi~~~~~~~~~~~~~~~-ga~--~--~~d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKL---FG-ARVIATAGSEDKLRRAKAL-GAD--E--TVNYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHH---TT-CEEEEEESSHHHHHHHHHH-TCS--E--EEETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHH---CC-CEEEEEeCCHHHHHHHHhc-CCC--E--EEcCCcccHHHHHHHHhC
Confidence 35678999999998 445555344432 23 5899999999999988764 211 1 13443322111 11
Q ss_pred cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 102 LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+|+|+.+-. . ..+....+.|+++|+++...
T Consensus 233 ~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 233 GKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESS
T ss_pred CCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEe
Confidence 247999998765 2 24667788999999987753
No 366
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=87.78 E-value=1 Score=43.47 Aligned_cols=97 Identities=19% Similarity=0.217 Sum_probs=59.0
Q ss_pred CCCCC------CEEEEECCCC-ChhH-HHHhcccCCCCCcEEEEEeCCHH---HHHHHHhhcCCCCeEEEEecccCCccc
Q psy11646 30 KWTDN------ESVLDVGCGP-GNVT-SKLLLPNLPKSVVKLVGLDVSPN---MIKHAKNHHTNPKLEFVVANIADQNLE 98 (433)
Q Consensus 30 ~~~~~------~~VLDIGcG~-G~~~-~~~l~~~~~~~~~~v~gvDiS~~---~l~~A~~~~~~~~i~~~~~Di~~~~l~ 98 (433)
..+++ .+||=+|+|. |..+ ..++.+. .+..+|+++|.+++ .++.+++. +.... |..+..+.
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~--~Ga~~Vi~~~~~~~~~~~~~~~~~l----Ga~~v--~~~~~~~~ 234 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDD--KGYENLYCLGRRDRPDPTIDIIEEL----DATYV--DSRQTPVE 234 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCT--TCCCEEEEEECCCSSCHHHHHHHHT----TCEEE--ETTTSCGG
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHH--cCCcEEEEEeCCcccHHHHHHHHHc----CCccc--CCCccCHH
Confidence 34678 9999999843 2222 2333022 23224999999988 88888764 22322 33322221
Q ss_pred c---cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 99 S---IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 99 ~---~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+ . .+.+|+|+-.-.- ...+....+.|+++|+++...
T Consensus 235 ~i~~~-~gg~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 235 DVPDV-YEQMDFIYEATGF------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp GHHHH-SCCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHh-CCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEEe
Confidence 1 1 2479999865442 235778889999999988753
No 367
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=87.74 E-value=0.41 Score=46.78 Aligned_cols=102 Identities=14% Similarity=0.179 Sum_probs=64.0
Q ss_pred HHhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEeccc--CCccc----
Q psy11646 26 IDQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIA--DQNLE---- 98 (433)
Q Consensus 26 ~~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~--~~~l~---- 98 (433)
.+....+++.+||=+|+|. |..+..++ +.. +..+|+++|.+++.++.|++.- ... ..|.. ...+.
T Consensus 186 ~~~~~~~~g~~VlV~GaG~vG~~a~q~a-~~~--Ga~~Vi~~~~~~~~~~~a~~lG----a~~-vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 186 WNTAKVEPGSNVAIFGLGTVGLAVAEGA-KTA--GASRIIGIDIDSKKYETAKKFG----VNE-FVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HTTTCCCTTCCEEEECCSHHHHHHHHHH-HHH--TCSCEEEECSCTTHHHHHHTTT----CCE-EECGGGCSSCHHHHHH
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHH-HHc--CCCeEEEEcCCHHHHHHHHHcC----CcE-EEccccCchhHHHHHH
Confidence 3555667899999999864 44443333 332 2238999999999999888652 111 12322 11111
Q ss_pred ccccCcEeEEEEcccccchhhHHHHHHHHHHhccCC-CEEEEEe
Q psy11646 99 SIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPG-GEVLLLL 141 (433)
Q Consensus 99 ~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpG-G~lll~~ 141 (433)
....+.+|+|+-.-.- ...+....+.|++| |++++..
T Consensus 258 ~~~~gg~D~vid~~g~------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEECCCC------HHHHHHHHHHhhccCCEEEEEc
Confidence 1112479999875442 34678888999997 9988754
No 368
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=87.68 E-value=0.61 Score=45.45 Aligned_cols=101 Identities=12% Similarity=0.115 Sum_probs=62.7
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC--Ccccc----
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD--QNLES---- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~--~~l~~---- 99 (433)
+....+++.+||-+|+|. |..+.. +++.. +..+|+++|.+++.++.+++. +.. .. .|..+ ..+.+
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~--Ga~~Vi~~~~~~~~~~~a~~l-Ga~--~v--i~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAII-GCKIA--GASRIIAIDINGEKFPKAKAL-GAT--DC--LNPRELDKPVQDVITE 260 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHH-HHHHT--TCSEEEEECSCGGGHHHHHHT-TCS--EE--ECGGGCSSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHH-HHHHc--CCCeEEEEcCCHHHHHHHHHh-CCc--EE--EccccccchHHHHHHH
Confidence 445667899999999764 344423 33332 323899999999999998764 211 11 23221 11111
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCC-CEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPG-GEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpG-G~lll~~ 141 (433)
...+.+|+|+-.-.- ...+....++|++| |++++..
T Consensus 261 ~~~~g~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 261 LTAGGVDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHTSCBSEEEESSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCccEEEECCCC------HHHHHHHHHHhhcCCCEEEEEC
Confidence 112479999875442 34577888999999 9988753
No 369
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=87.58 E-value=0.53 Score=45.83 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=62.8
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC--Cccc----c
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD--QNLE----S 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~--~~l~----~ 99 (433)
+....+++.+||-+|+|. |..+..+ ++.. +..+|+++|.+++.++.+++. +.. .+ .|..+ ..+. .
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiql-ak~~--Ga~~Vi~~~~~~~~~~~a~~l-Ga~--~v--i~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVG-CKAA--GASRIIGVGTHKDKFPKAIEL-GAT--EC--LNPKDYDKPIYEVICE 256 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHH-HHHH--TCSEEEEECSCGGGHHHHHHT-TCS--EE--ECGGGCSSCHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHH-HHHc--CCCeEEEECCCHHHHHHHHHc-CCc--EE--EecccccchHHHHHHH
Confidence 445667899999999764 4444333 3332 213899999999999998864 211 11 22221 1111 1
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCC-CEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPG-GEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpG-G~lll~~ 141 (433)
...+.+|+|+-.-.- ...+....++|+++ |++++..
T Consensus 257 ~t~gg~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 257 KTNGGVDYAVECAGR------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCCCEEEECCCC------HHHHHHHHHHHhcCCCEEEEEc
Confidence 112479999875442 34577888999999 9988753
No 370
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=86.98 E-value=0.7 Score=44.93 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=62.6
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC--Cccc----c
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD--QNLE----S 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~--~~l~----~ 99 (433)
+....+++.+||-+|+|. |..+..++ +.. +..+|+++|.+++.++.+++.- .. .+ .|..+ ..+. .
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla-~~~--Ga~~Vi~~~~~~~~~~~~~~lG-a~--~v--i~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGC-KVA--GASRIIGVDINKDKFARAKEFG-AT--EC--INPQDFSKPIQEVLIE 255 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHH-HHH--TCSEEEEECSCGGGHHHHHHHT-CS--EE--ECGGGCSSCHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHH-HHc--CCCeEEEEcCCHHHHHHHHHcC-Cc--eE--eccccccccHHHHHHH
Confidence 445667899999999764 34443333 322 2138999999999999988652 11 11 23221 1111 1
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCC-CEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPG-GEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpG-G~lll~~ 141 (433)
...+.+|+|+-.-.- ...+....++|+++ |++++..
T Consensus 256 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 256 MTDGGVDYSFECIGN------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCc------HHHHHHHHHhhccCCcEEEEEe
Confidence 112479999875542 34577888999999 9988753
No 371
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.96 E-value=1.5 Score=36.06 Aligned_cols=98 Identities=18% Similarity=0.137 Sum_probs=59.0
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccc-ccccCcEeEEEEcc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLE-SIFLAKFNKIFSFY 112 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~-~~~~~~fD~Vis~~ 112 (433)
..+|+=+|+|. ++..++..+...+ ..|+++|.+++.++.+++. ++.+..+|..+...- ......+|.|++..
T Consensus 7 ~~~viIiG~G~--~G~~la~~L~~~g-~~v~vid~~~~~~~~~~~~----g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 7 CNHALLVGYGR--VGSLLGEKLLASD-IPLVVIETSRTRVDELRER----GVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHT----TCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCCEEEECcCH--HHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHc----CCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 45799998864 4422322222233 6899999999999888763 677888888654221 11125689888754
Q ss_pred cccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 113 CLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 113 ~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.-.. ....+-...+.+.|+..++...
T Consensus 80 ~~~~---~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 80 PNGY---EAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp SCHH---HHHHHHHHHHHHCSSSEEEEEE
T ss_pred CChH---HHHHHHHHHHHHCCCCeEEEEE
Confidence 4221 1112333456677887766543
No 372
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=86.86 E-value=0.46 Score=45.47 Aligned_cols=98 Identities=12% Similarity=0.099 Sum_probs=62.2
Q ss_pred hcCCCCCCEEEEECC--CCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-----c
Q psy11646 28 QFKWTDNESVLDVGC--GPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-----I 100 (433)
Q Consensus 28 ~l~~~~~~~VLDIGc--G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-----~ 100 (433)
..+.+++.+||-.|+ |.|..+..+++. .+ .+++++|.+++.++.+++. +.. . ..|..+....+ .
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~---~G-~~Vi~~~~~~~~~~~~~~~-g~~--~--~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARH---LG-ATVIGTVSTEEKAETARKL-GCH--H--TINYSTQDFAEVVREIT 210 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHH---TT-CEEEEEESSHHHHHHHHHH-TCS--E--EEETTTSCHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHH---CC-CEEEEEeCCHHHHHHHHHc-CCC--E--EEECCCHHHHHHHHHHh
Confidence 445678999999995 445555344432 23 5999999999888888764 211 1 12433322111 0
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+|+|+.+-.- ..+....+.|++||+++...
T Consensus 211 ~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 211 GGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp TTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECC
T ss_pred CCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 12469999976552 34677789999999987753
No 373
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=86.72 E-value=0.77 Score=44.19 Aligned_cols=93 Identities=11% Similarity=0.251 Sum_probs=57.4
Q ss_pred CCCEEEEEC-CCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc---ccccccCcEeE
Q psy11646 33 DNESVLDVG-CGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN---LESIFLAKFNK 107 (433)
Q Consensus 33 ~~~~VLDIG-cG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~---l~~~~~~~fD~ 107 (433)
++.+||=+| +|. |..+..++ +. .+ .+|++++.+++-++.+++.- .. .+ .|..+.. +.......+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla-~~--~G-a~Vi~~~~~~~~~~~~~~lG-a~--~v--i~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIA-KA--YG-LRVITTASRNETIEWTKKMG-AD--IV--LNHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHH-HH--TT-CEEEEECCSHHHHHHHHHHT-CS--EE--ECTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HH--cC-CEEEEEeCCHHHHHHHHhcC-Cc--EE--EECCccHHHHHHHhCCCCccE
Confidence 789999995 443 44443333 22 23 59999999999999998752 11 11 1222210 11111246999
Q ss_pred EEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 108 IFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
|+-+.. ....+....++|+++|+++..
T Consensus 221 v~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 VFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 987543 234567888999999998754
No 374
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=86.60 E-value=0.49 Score=45.74 Aligned_cols=99 Identities=13% Similarity=0.047 Sum_probs=62.2
Q ss_pred HhcCCCCCCEEEEECC-C-CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----c
Q psy11646 27 DQFKWTDNESVLDVGC-G-PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----I 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGc-G-~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~ 100 (433)
+....+++.+||-.|+ | .|..+..+++ . .+ .+|+++|.+++.++.+++.- .. .. .|..+..+.+ .
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~-~--~G-a~Vi~~~~~~~~~~~~~~lG-a~--~~--~~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLAR-A--FG-AEVYATAGSTGKCEACERLG-AK--RG--INYRSEDFAAVIKAE 231 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHH-H--TT-CEEEEEESSHHHHHHHHHHT-CS--EE--EETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHH-H--cC-CEEEEEeCCHHHHHHHHhcC-CC--EE--EeCCchHHHHHHHHH
Confidence 4456678999999954 2 3444433333 2 23 58999999999999988752 11 11 2332221111 1
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+|+|+.+-.-. .+....+.|+++|++++..
T Consensus 232 ~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 232 TGQGVDIILDMIGAA-------YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp HSSCEEEEEESCCGG-------GHHHHHHTEEEEEEEEECC
T ss_pred hCCCceEEEECCCHH-------HHHHHHHHhccCCEEEEEE
Confidence 135799999866532 4667788999999988753
No 375
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.55 E-value=0.26 Score=47.00 Aligned_cols=98 Identities=14% Similarity=0.115 Sum_probs=61.4
Q ss_pred hcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-----c
Q psy11646 28 QFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-----I 100 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-----~ 100 (433)
..+.+++.+||-.|++ .|..+..+++. .+ .+|+++|.+++.++.+++. +.. . ..|..+....+ .
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~---~G-~~V~~~~~~~~~~~~~~~~-g~~--~--~~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKA---LG-AKLIGTVGTAQKAQSALKA-GAW--Q--VINYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHH---HT-CEEEEEESSHHHHHHHHHH-TCS--E--EEETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHH---cC-CEEEEEeCCHHHHHHHHHc-CCC--E--EEECCCccHHHHHHHHh
Confidence 4456789999999953 34444333332 23 5899999999988888764 211 1 12433221111 0
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+|+|+.+-. ...+....+.|+++|+++...
T Consensus 206 ~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 206 GGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEe
Confidence 1246999998765 124677789999999988753
No 376
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=86.52 E-value=0.34 Score=46.72 Aligned_cols=100 Identities=19% Similarity=0.123 Sum_probs=62.0
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----c-
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----I- 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~- 100 (433)
...+. ++.+||-+|+|. |..+..++ +.. +..+|+++|.+++.++.+++.- .. .. .|..+..+.+ .
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a-~~~--Ga~~Vi~~~~~~~~~~~~~~~G-a~--~~--~~~~~~~~~~~v~~~~ 232 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVA-KAS--GAYPVIVSEPSDFRRELAKKVG-AD--YV--INPFEEDVVKEVMDIT 232 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHH-HHT--TCCSEEEECSCHHHHHHHHHHT-CS--EE--ECTTTSCHHHHHHHHT
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHH-HHc--CCCEEEEECCCHHHHHHHHHhC-CC--EE--ECCCCcCHHHHHHHHc
Confidence 45566 899999999853 34443333 222 3128999999999999888642 11 11 2332221211 0
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....+|+|+..-.. ...+....+.|+++|+++...
T Consensus 233 ~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 233 DGNGVDVFLEFSGA------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TTSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEc
Confidence 11369999876542 345778889999999988753
No 377
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=86.28 E-value=0.65 Score=43.99 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=57.8
Q ss_pred HhcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcE
Q psy11646 27 DQFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
...+.+++.+||=+|+|. |..+..+++ . .+ .+|++++ +++.++.+++. +.....-| .... ...+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak-~--~G-a~Vi~~~-~~~~~~~~~~l----Ga~~v~~d-----~~~v-~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLN-N--AG-YVVDLVS-ASLSQALAAKR----GVRHLYRE-----PSQV-TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHH-H--HT-CEEEEEC-SSCCHHHHHHH----TEEEEESS-----GGGC-CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHH-H--cC-CEEEEEE-ChhhHHHHHHc----CCCEEEcC-----HHHh-CCCc
Confidence 556677899999999953 444433333 2 23 5999999 99989998875 22222213 1111 4679
Q ss_pred eEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 106 NKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 106 D~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
|+|+-.-.-. .+....+.|+++|+++..
T Consensus 201 Dvv~d~~g~~-------~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 201 FAIFDAVNSQ-------NAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEECC--------------TTGGGEEEEEEEEEE
T ss_pred cEEEECCCch-------hHHHHHHHhcCCCEEEEE
Confidence 9998644321 225567999999998876
No 378
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.11 E-value=4.7 Score=32.76 Aligned_cols=73 Identities=15% Similarity=0.170 Sum_probs=47.6
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccc-ccccCcEeEEEEcc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLE-SIFLAKFNKIFSFY 112 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~-~~~~~~fD~Vis~~ 112 (433)
..+|+=+|+| .++..++..+...+ .+|+++|.+++.++.+++. ++.++.+|..+...- ......+|.|+...
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g-~~V~~id~~~~~~~~~~~~----~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~ 78 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAG-KKVLAVDKSKEKIELLEDE----GFDAVIADPTDESFYRSLDLEGVSAVLITG 78 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHT----TCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHC----CCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence 4579999985 45533333332233 6899999999998887763 567888888763211 11125689888755
Q ss_pred c
Q psy11646 113 C 113 (433)
Q Consensus 113 ~ 113 (433)
.
T Consensus 79 ~ 79 (141)
T 3llv_A 79 S 79 (141)
T ss_dssp S
T ss_pred C
Confidence 5
No 379
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=85.93 E-value=0.37 Score=46.67 Aligned_cols=99 Identities=14% Similarity=-0.057 Sum_probs=61.3
Q ss_pred HhcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-----
Q psy11646 27 DQFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----- 99 (433)
...+.+++.+||-.|++ .|..+..+++. .+ .+++++|.+++.++.+++. +. . ...|..+....+
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~---~G-a~Vi~~~~~~~~~~~~~~~-g~---~-~~~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRM---AG-AIPLVTAGSQKKLQMAEKL-GA---A-AGFNYKKEDFSEATLKF 226 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHH---TT-CEEEEEESCHHHHHHHHHH-TC---S-EEEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHH---cC-CEEEEEeCCHHHHHHHHHc-CC---c-EEEecCChHHHHHHHHH
Confidence 34556789999999853 34444333332 23 5899999999999888654 21 1 122333221111
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.....+|+|+.+-.-. .+....++|++||++++..
T Consensus 227 ~~~~~~d~vi~~~G~~-------~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 227 TKGAGVNLILDCIGGS-------YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TTTSCEEEEEESSCGG-------GHHHHHHHEEEEEEEEECC
T ss_pred hcCCCceEEEECCCch-------HHHHHHHhccCCCEEEEEe
Confidence 0124699998766531 3566788999999988753
No 380
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=85.86 E-value=0.38 Score=46.99 Aligned_cols=70 Identities=16% Similarity=-0.013 Sum_probs=46.6
Q ss_pred HHhccCCCEEEEEeccCCchhhHHHhhhcCCCcccccccee--------eeecc----ccCceEEEccccccchHHHHHH
Q psy11646 128 YNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRT--------YRCLL----FTGVIQVQGDITKESTIKEIFS 195 (433)
Q Consensus 128 ~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~--------~~m~p----l~gv~~iqgDi~~~~t~~~il~ 195 (433)
.+.|+||..++ +++..| ++|+++...+. .+|.| .+++.++++|.....
T Consensus 206 ~~~l~~G~~vl--DLGAaP-----------GGWT~~l~~rg~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~------- 265 (375)
T 4auk_A 206 DERLANGMWAV--DLGACP-----------GGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFR------- 265 (375)
T ss_dssp HHHSCTTCEEE--EETCTT-----------CHHHHHHHHTTCEEEEECSSCCCHHHHTTTCEEEECSCTTTCC-------
T ss_pred hccCCCCCEEE--EeCcCC-----------CHHHHHHHHCCCEEEEEEhhhcChhhccCCCeEEEeCcccccc-------
Confidence 57789997755 557777 66666654332 22332 468889998866543
Q ss_pred hcCCCCCeEEEecCCCCCCCCCc
Q psy11646 196 HFDDEKVDLVVFDGAPDVTGLHD 218 (433)
Q Consensus 196 ~~~~~~~dlVvsD~ap~~tG~~~ 218 (433)
....++|+|+|||+++.+++..
T Consensus 266 -~~~~~~D~vvsDm~~~p~~~~~ 287 (375)
T 4auk_A 266 -PTRSNISWMVCDMVEKPAKVAA 287 (375)
T ss_dssp -CCSSCEEEEEECCSSCHHHHHH
T ss_pred -CCCCCcCEEEEcCCCChHHhHH
Confidence 2346899999999998665433
No 381
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=85.83 E-value=0.67 Score=44.40 Aligned_cols=58 Identities=12% Similarity=0.070 Sum_probs=42.3
Q ss_pred CCeEEEEecccCCcccccccCcEeEEEEcccccc--------------hhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 83 PKLEFVVANIADQNLESIFLAKFNKIFSFYCLHW--------------VQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 83 ~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~--------------~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
....++++|..+. +....+++||+|++...... .......+.++.++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~-l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLEL-LESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHH-GGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHH-HhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 4567888887542 22233478999999876632 2346778999999999999998864
No 382
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=85.38 E-value=2.2 Score=41.25 Aligned_cols=94 Identities=16% Similarity=0.257 Sum_probs=58.8
Q ss_pred CCCEEEEEC-CCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc---ccccccCcEeE
Q psy11646 33 DNESVLDVG-CGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN---LESIFLAKFNK 107 (433)
Q Consensus 33 ~~~~VLDIG-cG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~---l~~~~~~~fD~ 107 (433)
++.+||=+| +|. |..+..++ +.. ++.+|+++|.+++.++.+++. +.. .+ .|..+.. +.....+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qla-k~~--~g~~Vi~~~~~~~~~~~~~~l-Gad--~v--i~~~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIA-RQR--TDLTVIATASRPETQEWVKSL-GAH--HV--IDHSKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHH-HHH--CCSEEEEECSSHHHHHHHHHT-TCS--EE--ECTTSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHh--cCCEEEEEeCCHHHHHHHHHc-CCC--EE--EeCCCCHHHHHHHhcCCCceE
Confidence 788999998 443 45553333 321 225999999999999998874 211 11 1222210 11111257999
Q ss_pred EEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 108 IFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
|+-+-. -...+....++|+++|++++.
T Consensus 243 vid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 987543 234677888999999998875
No 383
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=85.19 E-value=0.54 Score=45.99 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=61.6
Q ss_pred HhcC-CCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEeccc---CCc----c
Q psy11646 27 DQFK-WTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIA---DQN----L 97 (433)
Q Consensus 27 ~~l~-~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~---~~~----l 97 (433)
.... .+++.+||-+|+|. |..+.. +++.. +..+|++++.+++.++.+++. +.. .++ |.. +.. +
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~--Ga~~Vi~~~~~~~~~~~~~~l-Ga~--~vi--~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVV-IARSL--GAENVIVIAGSPNRLKLAEEI-GAD--LTL--NRRETSVEERRKAI 259 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHH-HHHHT--TBSEEEEEESCHHHHHHHHHT-TCS--EEE--ETTTSCHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHH-HHHHc--CCceEEEEcCCHHHHHHHHHc-CCc--EEE--eccccCcchHHHHH
Confidence 4456 67899999999653 333423 33332 214899999999999999864 211 122 221 111 1
Q ss_pred cccc-cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 98 ESIF-LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 98 ~~~~-~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.... ...+|+|+-.-.- ...+....+.|+++|+++...
T Consensus 260 ~~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 260 MDITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred HHHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 1111 1369999876542 135677889999999988753
No 384
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=85.01 E-value=2.1 Score=38.92 Aligned_cols=59 Identities=25% Similarity=0.235 Sum_probs=36.9
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEee
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFR 251 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~ 251 (433)
.++..+++|.+...... .+ ...+|+|++|++.. + + .......+.+.|+|||.|++-+..
T Consensus 125 ~nv~~i~~Da~~~~~~~----~~-~~~~D~I~~d~a~~-------~---~---~~il~~~~~~~LkpGG~lvisik~ 183 (232)
T 3id6_C 125 PNIFPLLADARFPQSYK----SV-VENVDVLYVDIAQP-------D---Q---TDIAIYNAKFFLKVNGDMLLVIKA 183 (232)
T ss_dssp TTEEEEECCTTCGGGTT----TT-CCCEEEEEECCCCT-------T---H---HHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCeEEEEcccccchhhh----cc-ccceEEEEecCCCh-------h---H---HHHHHHHHHHhCCCCeEEEEEEcc
Confidence 46677788876543221 11 34799999998751 1 1 122245566789999999987533
No 385
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=84.62 E-value=1.7 Score=37.04 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=56.4
Q ss_pred ceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCHH
Q psy11646 177 VIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNVV 256 (433)
Q Consensus 177 v~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~~ 256 (433)
+...++|+.+.. ....+|+|+++..-. . ........+.-+.++|++||.+++-........
T Consensus 104 ~~~~~~d~~~~~---------~~~~~D~v~~~~~~~-----~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 164 (194)
T 1dus_A 104 IRVVHSDLYENV---------KDRKYNKIITNPPIR-----A-----GKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAK 164 (194)
T ss_dssp EEEEECSTTTTC---------TTSCEEEEEECCCST-----T-----CHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHH
T ss_pred eEEEECchhccc---------ccCCceEEEECCCcc-----c-----chhHHHHHHHHHHHHcCCCCEEEEEECCCCChH
Confidence 667777765532 245799999865321 1 122344567778899999999999998887777
Q ss_pred HHHHHHhcccceeEEec
Q psy11646 257 CLETKFQIFFENVSIAK 273 (433)
Q Consensus 257 ~~~~~l~~~F~~v~~~K 273 (433)
.+...++..|..+.+.+
T Consensus 165 ~~~~~l~~~~~~~~~~~ 181 (194)
T 1dus_A 165 SLAKYMKDVFGNVETVT 181 (194)
T ss_dssp HHHHHHHHHHSCCEEEE
T ss_pred HHHHHHHHHhcceEEEe
Confidence 78888888898888764
No 386
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=84.38 E-value=0.66 Score=44.95 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=60.0
Q ss_pred cCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCC-cccccccCcEe
Q psy11646 29 FKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQ-NLESIFLAKFN 106 (433)
Q Consensus 29 l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~-~l~~~~~~~fD 106 (433)
.+.+++.+||-+|+|. |..+..+++ . .+ .+|+++|.+++.++.+++. +.. .+ .|..+. .......+.+|
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak-~--~G-a~Vi~~~~~~~~~~~~~~l-Ga~--~v--~~~~~~~~~~~~~~~~~D 245 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISK-A--MG-AETYVISRSSRKREDAMKM-GAD--HY--IATLEEGDWGEKYFDTFD 245 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHH-H--HT-CEEEEEESSSTTHHHHHHH-TCS--EE--EEGGGTSCHHHHSCSCEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHH-H--CC-CEEEEEcCCHHHHHHHHHc-CCC--EE--EcCcCchHHHHHhhcCCC
Confidence 5667899999999853 444433333 2 23 4899999999989988874 211 12 232221 11111115799
Q ss_pred EEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 107 KIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 107 ~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
+|+-.-.-.. ...+....++|++||+++..
T Consensus 246 ~vid~~g~~~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 246 LIVVCASSLT----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEECCSCST----TCCTTTGGGGEEEEEEEEEC
T ss_pred EEEECCCCCc----HHHHHHHHHHhcCCCEEEEe
Confidence 9997654300 11244567899999998765
No 387
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=84.34 E-value=8.7 Score=33.05 Aligned_cols=60 Identities=12% Similarity=-0.053 Sum_probs=40.3
Q ss_pred HHHHHHHHHhccCCCeEEEEEeecCCHHHHHHHHh---cccceeEEecCCCCcccccceeEEEeecc
Q psy11646 229 IGALNITTFLLKPGGTFVGKIFRSRNVVCLETKFQ---IFFENVSIAKPKSSRNSSIESFIVCQNYR 292 (433)
Q Consensus 229 ~~al~ia~~~L~~gG~fv~Kif~g~~~~~~~~~l~---~~F~~v~~~KP~~sr~~s~E~~~v~~~~~ 292 (433)
...+.-+.++|++||.+++=.+.-.....+...++ ..|..+.+.+..+.+ +.+++++...
T Consensus 144 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~----~r~~~~~~~~ 206 (215)
T 4dzr_A 144 RRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGI----DRVIAVTREP 206 (215)
T ss_dssp HHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSC----EEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCC----EEEEEEEEcC
Confidence 55667778999999994444444444555555554 668888888776654 6677777644
No 388
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=84.16 E-value=3.4 Score=32.02 Aligned_cols=76 Identities=12% Similarity=0.018 Sum_probs=47.7
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEcc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFY 112 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~ 112 (433)
.+.+|+=+|+ |..+..++..+...+..+++++|.++..++.++. .++.+...|+.+...-...-..+|+|+..-
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR----MGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT----TTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh----CCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 3568999998 5555344333322332689999999988777662 467778888765321111124689998876
Q ss_pred cc
Q psy11646 113 CL 114 (433)
Q Consensus 113 ~l 114 (433)
..
T Consensus 78 ~~ 79 (118)
T 3ic5_A 78 PF 79 (118)
T ss_dssp CG
T ss_pred Cc
Confidence 53
No 389
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=84.02 E-value=1.7 Score=42.10 Aligned_cols=99 Identities=19% Similarity=0.264 Sum_probs=59.1
Q ss_pred hcCCC-CCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCC-cccccccCc
Q psy11646 28 QFKWT-DNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQ-NLESIFLAK 104 (433)
Q Consensus 28 ~l~~~-~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~-~l~~~~~~~ 104 (433)
..... ++.+||=+|+|. |..+..++ +. .+ .+|++++.+++.++.+++.++.. .+ .|..+. .+.. ..+.
T Consensus 181 ~~~~~~~g~~VlV~GaG~vG~~~~q~a-~~--~G-a~Vi~~~~~~~~~~~~~~~lGa~--~v--~~~~~~~~~~~-~~~~ 251 (366)
T 1yqd_A 181 YFGLDEPGKHIGIVGLGGLGHVAVKFA-KA--FG-SKVTVISTSPSKKEEALKNFGAD--SF--LVSRDQEQMQA-AAGT 251 (366)
T ss_dssp HTTCCCTTCEEEEECCSHHHHHHHHHH-HH--TT-CEEEEEESCGGGHHHHHHTSCCS--EE--EETTCHHHHHH-TTTC
T ss_pred hcCcCCCCCEEEEECCCHHHHHHHHHH-HH--CC-CEEEEEeCCHHHHHHHHHhcCCc--eE--EeccCHHHHHH-hhCC
Confidence 34556 899999999753 33332222 22 23 58999999999888887555322 11 232221 0111 1246
Q ss_pred EeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+|+|+..-.... .++...+.|+++|+++...
T Consensus 252 ~D~vid~~g~~~------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 252 LDGIIDTVSAVH------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEEEECCSSCC------CSHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCcHH------HHHHHHHHHhcCCEEEEEc
Confidence 999997654321 2345678899999988753
No 390
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=83.89 E-value=2.2 Score=40.37 Aligned_cols=98 Identities=10% Similarity=0.073 Sum_probs=59.2
Q ss_pred hcCCCCCC-EEEEECC--CCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc-ccccccC
Q psy11646 28 QFKWTDNE-SVLDVGC--GPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN-LESIFLA 103 (433)
Q Consensus 28 ~l~~~~~~-~VLDIGc--G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~-l~~~~~~ 103 (433)
....+++. +||=.|+ |.|..+..+++ . .+ .+|++++.+++-++.+++.- .. ..+ |..+.. ......+
T Consensus 140 ~~~~~~~~g~VlV~Ga~G~vG~~aiqla~-~--~G-a~Vi~~~~~~~~~~~~~~lG-a~--~vi--~~~~~~~~~~~~~~ 210 (324)
T 3nx4_A 140 DAGIRPQDGEVVVTGASGGVGSTAVALLH-K--LG-YQVAAVSGRESTHGYLKSLG-AN--RIL--SRDEFAESRPLEKQ 210 (324)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHH-H--TT-CCEEEEESCGGGHHHHHHHT-CS--EEE--EGGGSSCCCSSCCC
T ss_pred hcccCCCCCeEEEECCCcHHHHHHHHHHH-H--cC-CEEEEEeCCHHHHHHHHhcC-CC--EEE--ecCCHHHHHhhcCC
Confidence 34444422 4998887 34555533333 3 23 58999999999999998752 11 111 222111 1112235
Q ss_pred cEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+|+|+-.-. ...+....+.|+++|+++...
T Consensus 211 ~~d~v~d~~g-------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 211 LWAGAIDTVG-------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp CEEEEEESSC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred CccEEEECCC-------cHHHHHHHHHHhcCCEEEEEe
Confidence 7999876543 127888899999999988753
No 391
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=83.88 E-value=0.72 Score=44.35 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=60.8
Q ss_pred HhcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-----
Q psy11646 27 DQFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----- 99 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----- 99 (433)
+....+++.+||=+|++ .|..+..+++ . .+ .+|+++ .+++.++.+++.- ... .| ....+.+
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~-~--~G-a~Vi~~-~~~~~~~~~~~lG----a~~--i~-~~~~~~~~~~~~ 211 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIAL-A--RG-ARVFAT-ARGSDLEYVRDLG----ATP--ID-ASREPEDYAAEH 211 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHH-H--TT-CEEEEE-ECHHHHHHHHHHT----SEE--EE-TTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHH-H--CC-CEEEEE-eCHHHHHHHHHcC----CCE--ec-cCCCHHHHHHHH
Confidence 55666789999999953 3445533333 2 23 589999 8999888887752 222 22 2211211
Q ss_pred cccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 100 IFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 100 ~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.....+|+|+-+-.- ..+....+.|+++|+++...
T Consensus 212 ~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 212 TAGQGFDLVYDTLGG-------PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HTTSCEEEEEESSCT-------HHHHHHHHHEEEEEEEEESC
T ss_pred hcCCCceEEEECCCc-------HHHHHHHHHHhcCCeEEEEc
Confidence 112469999875541 35777888999999988753
No 392
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=83.82 E-value=2.4 Score=44.86 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=63.7
Q ss_pred CCCEEEEECCCCChhHHHHhccc------CCC---CCcEEEEEeC---CHHHHHHHHhhc--------------------
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPN------LPK---SVVKLVGLDV---SPNMIKHAKNHH-------------------- 80 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~------~~~---~~~~v~gvDi---S~~~l~~A~~~~-------------------- 80 (433)
+..+|+|+|.|+|......++.. .|. .-.+++.++. +...+..|-..+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45689999999998775554421 111 1257999998 556555433211
Q ss_pred ------CC--CCeEEEEecccCCcccccc---cCcEeEEEEcccccc-hhh--HHHHHHHHHHhccCCCEEE
Q psy11646 81 ------TN--PKLEFVVANIADQNLESIF---LAKFNKIFSFYCLHW-VQD--QRQAISNIYNLLMPGGEVL 138 (433)
Q Consensus 81 ------~~--~~i~~~~~Di~~~~l~~~~---~~~fD~Vis~~~l~~-~~d--~~~~l~~i~~~LkpGG~ll 138 (433)
.. -.+++..+|+.+. +++.. ...+|.++.-..--. -++ ...++..+.++++|||.+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~-l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTL-LPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHH-GGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHH-HhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 01 1355667777553 33321 368999988432111 011 2568899999999999865
No 393
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=83.26 E-value=0.33 Score=46.72 Aligned_cols=97 Identities=22% Similarity=0.279 Sum_probs=59.9
Q ss_pred hcCCCCCCEEEEECCCC-ChhHHHHhcccCCCCCc-EEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----cc
Q psy11646 28 QFKWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVV-KLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----IF 101 (433)
Q Consensus 28 ~l~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~-~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~~ 101 (433)
..+. ++.+||-+|+|. |..+..+ ++.. + . +|+++|.+++.++.+++. . . . ..|..+..+.+ ..
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~-a~~~--G-a~~Vi~~~~~~~~~~~~~~l-a-~--~--v~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMV-VRAS--G-AGPILVSDPNPYRLAFARPY-A-D--R--LVNPLEEDLLEVVRRVT 228 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHH-HHHT--T-CCSEEEECSCHHHHGGGTTT-C-S--E--EECTTTSCHHHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHH-HHHc--C-CCEEEEECCCHHHHHHHHHh-H-H--h--ccCcCccCHHHHHHHhc
Confidence 5566 899999999853 3444233 3322 3 4 899999999887777653 1 1 1 12332211111 01
Q ss_pred cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 102 LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...+|+|+-.-.- ...++...+.|+++|+++...
T Consensus 229 ~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 229 GSGVEVLLEFSGN------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 2469999876542 245778889999999988753
No 394
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.87 E-value=1.4 Score=43.36 Aligned_cols=99 Identities=14% Similarity=0.108 Sum_probs=57.8
Q ss_pred CCCCCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----c-ccC
Q psy11646 30 KWTDNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----I-FLA 103 (433)
Q Consensus 30 ~~~~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~-~~~ 103 (433)
..+++.+||=+|+|. |..+. .+++.. +..+|+++|.+++-++.+++.- ... ..|..+..+.+ . ...
T Consensus 210 ~~~~g~~VlV~GaG~vG~~ai-qlak~~--Ga~~Vi~~~~~~~~~~~~~~lG----a~~-vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAV-AILKHA--GASKVILSEPSEVRRNLAKELG----ADH-VIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHH-HHHHHT--TCSEEEEECSCHHHHHHHHHHT----CSE-EECTTTSCHHHHHHHHTTTC
T ss_pred CCCCCCEEEEECCCHHHHHHH-HHHHHc--CCCEEEEECCCHHHHHHHHHcC----CCE-EEcCCCCCHHHHHHHHhCCC
Confidence 467899999999854 33332 233332 3238999999999999998762 111 12222211111 1 113
Q ss_pred cEeEEEEcccccchhhHHHHHHHHHHhc----cCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLHWVQDQRQAISNIYNLL----MPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~~~~l~~i~~~L----kpGG~lll~~ 141 (433)
.+|+|+-.-.- ....+..+.+.| ++||++++..
T Consensus 282 g~D~vid~~g~-----~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 282 GAKLFLEATGV-----PQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CCSEEEECSSC-----HHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCCEEEECCCC-----cHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 69999865442 222334444455 9999988754
No 395
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.86 E-value=5.2 Score=34.15 Aligned_cols=99 Identities=11% Similarity=0.132 Sum_probs=56.2
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc-ccc-ccCcEeEEEEc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL-ESI-FLAKFNKIFSF 111 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l-~~~-~~~~fD~Vis~ 111 (433)
+.+|+=+|+| ..+..++..+...++.+|+++|.+++.++.+++. ++....+|..+... ... ....+|+|+..
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~----g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRSE----GRNVISGDATDPDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT----TCCEEECCTTCHHHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC----CCCEEEcCCCCHHHHHhccCCCCCCEEEEe
Confidence 5689999875 4442333222222025899999999988877753 45667777654321 111 12568988875
Q ss_pred ccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 112 YCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 112 ~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
-.-. .....+-...+.+.|++.++...
T Consensus 113 ~~~~---~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 113 MPHH---QGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CSSH---HHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCh---HHHHHHHHHHHHHCCCCEEEEEE
Confidence 4311 11122233455566777776643
No 396
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=82.82 E-value=1.8 Score=41.88 Aligned_cols=90 Identities=22% Similarity=0.204 Sum_probs=55.9
Q ss_pred CCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCH---HHHHHHHhhcCCCCeEEEEecccCCccccc---ccCcEe
Q psy11646 34 NESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSP---NMIKHAKNHHTNPKLEFVVANIADQNLESI---FLAKFN 106 (433)
Q Consensus 34 ~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~---~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~---~~~~fD 106 (433)
+.+||-+|+|. |..+..+++ . .+ .+|+++|.++ +.++.+++. +.... | .+ .+.+. ..+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~-~--~G-a~Vi~~~~~~~~~~~~~~~~~~----ga~~v--~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFR-T--YG-LEVWMANRREPTEVEQTVIEET----KTNYY--N-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHH-H--HT-CEEEEEESSCCCHHHHHHHHHH----TCEEE--E-CT-TCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-h--CC-CEEEEEeCCccchHHHHHHHHh----CCcee--c-hH-HHHHHHHHhCCCCC
Confidence 99999999832 223322222 2 23 4999999998 777877754 22322 3 32 22110 115699
Q ss_pred EEEEcccccchhhHHHHH-HHHHHhccCCCEEEEEe
Q psy11646 107 KIFSFYCLHWVQDQRQAI-SNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 107 ~Vis~~~l~~~~d~~~~l-~~i~~~LkpGG~lll~~ 141 (433)
+|+.+-... ..+ +...+.|+++|+++...
T Consensus 249 ~vid~~g~~------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 249 VIIDATGAD------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEEECCCCC------THHHHHHGGGEEEEEEEEECS
T ss_pred EEEECCCCh------HHHHHHHHHHHhcCCEEEEEe
Confidence 998766532 145 77889999999988753
No 397
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=82.81 E-value=8.9 Score=35.37 Aligned_cols=71 Identities=7% Similarity=-0.071 Sum_probs=45.7
Q ss_pred ceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeec----
Q psy11646 177 VIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRS---- 252 (433)
Q Consensus 177 v~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g---- 252 (433)
+.++++|..+... ...+|+|++|..+.. ...+.-+..+|+|||.+++-.+..
T Consensus 177 v~~~~~D~~~~~~---------~~~fD~Vi~~~p~~~---------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 232 (278)
T 2frn_A 177 MSAYNMDNRDFPG---------ENIADRILMGYVVRT---------------HEFIPKALSIAKDGAIIHYHNTVPEKLM 232 (278)
T ss_dssp EEEECSCTTTCCC---------CSCEEEEEECCCSSG---------------GGGHHHHHHHEEEEEEEEEEEEEEGGGT
T ss_pred EEEEECCHHHhcc---------cCCccEEEECCchhH---------------HHHHHHHHHHCCCCeEEEEEEeeccccc
Confidence 5677777665432 567999999755322 334566778999999999988874
Q ss_pred --CCHHHHHHHHhcccceeEE
Q psy11646 253 --RNVVCLETKFQIFFENVSI 271 (433)
Q Consensus 253 --~~~~~~~~~l~~~F~~v~~ 271 (433)
.....+...++..--.+..
T Consensus 233 ~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 233 PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp TTTTHHHHHHHHHHTTCEEEE
T ss_pred cccHHHHHHHHHHHcCCeeEE
Confidence 2245555555444334444
No 398
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=82.70 E-value=4.2 Score=35.41 Aligned_cols=89 Identities=16% Similarity=0.186 Sum_probs=56.1
Q ss_pred CCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecC--------------CHHHHHHHHh
Q psy11646 198 DDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSR--------------NVVCLETKFQ 263 (433)
Q Consensus 198 ~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~--------------~~~~~~~~l~ 263 (433)
....+|+|++...- +.+. ..-....+.-+.++|+|||.+++-...+. ....+...++
T Consensus 99 ~~~~fD~v~~~~~l-----~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (211)
T 3e23_A 99 AIDAYDAVWAHACL-----LHVP----RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYA 169 (211)
T ss_dssp CCSCEEEEEECSCG-----GGSC----HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHH
T ss_pred CCCcEEEEEecCch-----hhcC----HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHH
Confidence 35679999986532 1111 12234567777889999999999876654 4566777776
Q ss_pred c-c-cceeEEecC-CCCcccccceeEEEeeccCCC
Q psy11646 264 I-F-FENVSIAKP-KSSRNSSIESFIVCQNYRPPK 295 (433)
Q Consensus 264 ~-~-F~~v~~~KP-~~sr~~s~E~~~v~~~~~~~~ 295 (433)
. - |+.+.+..- ...-....+.++.+...+++.
T Consensus 170 ~aG~f~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~ 204 (211)
T 3e23_A 170 EAGTWASVAVESSEGKGFDQELAQFLHVSVRKPEL 204 (211)
T ss_dssp HHCCCSEEEEEEEEEECTTSCEEEEEEEEEECCCC
T ss_pred hCCCcEEEEEEeccCCCCCCCCceEEEEEEecCcc
Confidence 4 4 888887753 222334455666666665544
No 399
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=81.69 E-value=1.8 Score=41.69 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=59.0
Q ss_pred hcCCC-CCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCC-cccccccCc
Q psy11646 28 QFKWT-DNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQ-NLESIFLAK 104 (433)
Q Consensus 28 ~l~~~-~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~-~l~~~~~~~ 104 (433)
..... ++.+||=+|+|. |..+..+ ++. .+ .++++++.+++.++.+++.++...+ + |..+. .... ..+.
T Consensus 174 ~~~~~~~g~~VlV~GaG~vG~~a~ql-ak~--~G-a~Vi~~~~~~~~~~~~~~~lGa~~v--i--~~~~~~~~~~-~~~g 244 (357)
T 2cf5_A 174 HFGLKQPGLRGGILGLGGVGHMGVKI-AKA--MG-HHVTVISSSNKKREEALQDLGADDY--V--IGSDQAKMSE-LADS 244 (357)
T ss_dssp HTSTTSTTCEEEEECCSHHHHHHHHH-HHH--HT-CEEEEEESSTTHHHHHHTTSCCSCE--E--ETTCHHHHHH-STTT
T ss_pred hcCCCCCCCEEEEECCCHHHHHHHHH-HHH--CC-CeEEEEeCChHHHHHHHHHcCCcee--e--ccccHHHHHH-hcCC
Confidence 34566 899999999753 2333222 222 23 5899999999988888855532221 1 22111 0111 1246
Q ss_pred EeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+|+|+-.-.-. ..+....++|++||+++...
T Consensus 245 ~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 245 LDYVIDTVPVH------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEEEEECCCSC------CCSHHHHTTEEEEEEEEECS
T ss_pred CCEEEECCCCh------HHHHHHHHHhccCCEEEEeC
Confidence 99998765422 12445678999999988753
No 400
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=81.19 E-value=9.2 Score=30.45 Aligned_cols=96 Identities=11% Similarity=0.058 Sum_probs=54.5
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc-cccccCcEeEEEEcc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL-ESIFLAKFNKIFSFY 112 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l-~~~~~~~fD~Vis~~ 112 (433)
+.+|+=+|+ |..+..++..+...+ .+++++|.+++.++.+++.. ++.+..+|..+... .......+|+|+..-
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g-~~v~~~d~~~~~~~~~~~~~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKG-HDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHhc---CcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 467888887 555533333222233 68999999998887776543 45566677653211 111124689988875
Q ss_pred cccchhhHHHHHHHHHHhccCCCEEEE
Q psy11646 113 CLHWVQDQRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 113 ~l~~~~d~~~~l~~i~~~LkpGG~lll 139 (433)
.-. .....+..+.+.+.++ .++.
T Consensus 78 ~~~---~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 78 GKE---EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp SCH---HHHHHHHHHHHHTTCC-CEEE
T ss_pred CCc---hHHHHHHHHHHHcCCC-EEEE
Confidence 432 1223444555667775 4444
No 401
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=80.82 E-value=0.75 Score=43.78 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=57.9
Q ss_pred hcCCCCCC-EEEEECC--CCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCC---cccccc
Q psy11646 28 QFKWTDNE-SVLDVGC--GPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQ---NLESIF 101 (433)
Q Consensus 28 ~l~~~~~~-~VLDIGc--G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~---~l~~~~ 101 (433)
....+++. +||-+|+ |.|..+..+++ . .+ .++++++.+++.++.+++. +.. ..+ |..+. ......
T Consensus 143 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~-~--~G-a~vi~~~~~~~~~~~~~~l-Ga~--~~i--~~~~~~~~~~~~~~ 213 (328)
T 1xa0_A 143 EHGLTPERGPVLVTGATGGVGSLAVSMLA-K--RG-YTVEASTGKAAEHDYLRVL-GAK--EVL--AREDVMAERIRPLD 213 (328)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHH-H--TT-CCEEEEESCTTCHHHHHHT-TCS--EEE--ECC---------CC
T ss_pred hcCCCCCCceEEEecCCCHHHHHHHHHHH-H--CC-CEEEEEECCHHHHHHHHHc-CCc--EEE--ecCCcHHHHHHHhc
Confidence 34556775 8999997 34445533333 2 23 4799999998888888764 211 111 21111 011111
Q ss_pred cCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 102 LAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 102 ~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+.+|+|+-+-.- ..+....+.|+++|++++..
T Consensus 214 ~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 214 KQRWAAAVDPVGG-------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp SCCEEEEEECSTT-------TTHHHHHHTEEEEEEEEECS
T ss_pred CCcccEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 2469999876542 14667788999999988753
No 402
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=80.77 E-value=1.2 Score=41.75 Aligned_cols=92 Identities=13% Similarity=0.199 Sum_probs=58.5
Q ss_pred CCCCCEEEEECC--CCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC-CcccccccCcEeE
Q psy11646 31 WTDNESVLDVGC--GPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD-QNLESIFLAKFNK 107 (433)
Q Consensus 31 ~~~~~~VLDIGc--G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~-~~l~~~~~~~fD~ 107 (433)
.+++.+||-+|+ |.|..+..+++ . .+ .+|++++.+++.++.+++. +.. .. .|..+ ..+.+.. ..+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~-~--~G-a~Vi~~~~~~~~~~~~~~~-ga~--~~--~~~~~~~~~~~~~-~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVAR-A--MG-LRVLAAASRPEKLALPLAL-GAE--EA--ATYAEVPERAKAW-GGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHH-H--TT-CEEEEEESSGGGSHHHHHT-TCS--EE--EEGGGHHHHHHHT-TSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-H--CC-CEEEEEeCCHHHHHHHHhc-CCC--EE--EECCcchhHHHHh-cCceE
Confidence 578999999997 33455533333 2 23 5899999999988888763 211 11 23322 1111111 56999
Q ss_pred EEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 108 IFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
|+. -.- ..+....+.|+++|+++..
T Consensus 193 vid-~g~-------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 193 VLE-VRG-------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEE-CSC-------TTHHHHHTTEEEEEEEEEC
T ss_pred EEE-CCH-------HHHHHHHHhhccCCEEEEE
Confidence 987 432 2467788999999998765
No 403
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=79.71 E-value=1.3 Score=41.71 Aligned_cols=27 Identities=15% Similarity=0.084 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 119 DQRQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 119 d~~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
....+++++.++|||||.+++......
T Consensus 149 l~~~~l~~a~r~LkpGG~~v~~~~~~~ 175 (290)
T 2xyq_A 149 FFTYLCGFIKQKLALGGSIAVKITEHS 175 (290)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 346889999999999999998665443
No 404
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=79.39 E-value=3.3 Score=41.89 Aligned_cols=58 Identities=14% Similarity=0.162 Sum_probs=43.8
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCC
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQ 95 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~ 95 (433)
..+++|+-||.|.++..+-. .++..+.++|+++.+.+.-+.++ ..+...++..|+.+.
T Consensus 88 ~~~viDLFaG~GGlslG~~~----aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHT----TTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHH----CCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhh
Confidence 46899999999999844432 34345899999999999988887 334556777888764
No 405
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=79.34 E-value=2.4 Score=40.20 Aligned_cols=110 Identities=9% Similarity=0.064 Sum_probs=75.4
Q ss_pred HHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeC----CHHHHHHHH-hhcCCCCeEEEEe-cccCCcc
Q psy11646 24 QYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDV----SPNMIKHAK-NHHTNPKLEFVVA-NIADQNL 97 (433)
Q Consensus 24 ~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDi----S~~~l~~A~-~~~~~~~i~~~~~-Di~~~~l 97 (433)
++.+....+++.+|||||||+|.++ ..+++. + +|+|+|+ ++.+++.++ +....+++.+.++ |+...+
T Consensus 73 ~i~~~~~~~~g~~VLDlGcG~G~~s-~~la~~---~--~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~- 145 (305)
T 2p41_A 73 WFVERNLVTPEGKVVDLGCGRGGWS-YYCGGL---K--NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP- 145 (305)
T ss_dssp HHHHTTSSCCCEEEEEETCTTSHHH-HHHHTS---T--TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC-
T ss_pred HHHHcCCCCCCCEEEEEcCCCCHHH-HHHHhc---C--CEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC-
Confidence 4444433467899999999999999 555533 3 7999999 565442211 1112257889888 877642
Q ss_pred cccccCcEeEEEEcccc---cchhhHH---HHHHHHHHhccCCCEEEEEeccC
Q psy11646 98 ESIFLAKFNKIFSFYCL---HWVQDQR---QAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 98 ~~~~~~~fD~Vis~~~l---~~~~d~~---~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
. ++||+|+|..+. ++..+.. .++..+.++|||||.+++..+..
T Consensus 146 -~---~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 -P---ERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp -C---CCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred -c---CCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 2 689999997664 3333332 57899999999999988866543
No 406
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=78.85 E-value=1.6 Score=42.46 Aligned_cols=100 Identities=13% Similarity=0.169 Sum_probs=54.8
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCC-cccccccCcEeEEEEc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQ-NLESIFLAKFNKIFSF 111 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~-~l~~~~~~~fD~Vis~ 111 (433)
++.+|+=+|+| ..+..++..+...+ .+|+++|.++..++.+++..+. .+. .|..+. .+.+. -..+|+|+.+
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~g~-~~~---~~~~~~~~l~~~-~~~~DvVi~~ 236 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVFGG-RVI---TLTATEANIKKS-VQHADLLIGA 236 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTT-SEE---EEECCHHHHHHH-HHHCSEEEEC
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhcCc-eEE---EecCCHHHHHHH-HhCCCEEEEC
Confidence 46799999984 45433332222233 5999999999988887765421 222 222211 11111 1358999876
Q ss_pred ccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 112 YCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 112 ~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
-.......+....++..+.+++||.++..
T Consensus 237 ~g~~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 237 VLVPGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp CC-------CCSCHHHHTTSCTTCEEEEC
T ss_pred CCCCccccchhHHHHHHHhhcCCCEEEEE
Confidence 55432111111245667888999987764
No 407
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=78.59 E-value=7.2 Score=35.87 Aligned_cols=74 Identities=18% Similarity=0.132 Sum_probs=49.1
Q ss_pred CCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecC----CHHHHHHHHhcccceeEEec-C
Q psy11646 200 EKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSR----NVVCLETKFQIFFENVSIAK-P 274 (433)
Q Consensus 200 ~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~----~~~~~~~~l~~~F~~v~~~K-P 274 (433)
..+|+|++|.... .. .+..+.+.|+|||.|++..-... ....+...++..|..+.... +
T Consensus 138 ~~fD~Ii~d~~dp-------~~---------~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~ 201 (262)
T 2cmg_A 138 KKYDLIFCLQEPD-------IH---------RIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAP 201 (262)
T ss_dssp CCEEEEEESSCCC-------HH---------HHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred hhCCEEEECCCCh-------HH---------HHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEc
Confidence 5799999995311 11 56778899999999998643221 14556777888899887765 3
Q ss_pred CCCcccccceeEEEeec
Q psy11646 275 KSSRNSSIESFIVCQNY 291 (433)
Q Consensus 275 ~~sr~~s~E~~~v~~~~ 291 (433)
-++ +..-.|++|...
T Consensus 202 vP~--~g~~~~~~as~~ 216 (262)
T 2cmg_A 202 LRI--LSNKGYIYASFK 216 (262)
T ss_dssp TCT--TCCEEEEEEESS
T ss_pred cCC--CcccEEEEeeCC
Confidence 444 333446677653
No 408
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=76.75 E-value=28 Score=29.54 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=42.2
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN 254 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~ 254 (433)
..+.++++|+.+... +....+|+|+++..--..+.+.... ........+.-+.++|++||.+++-.+.+..
T Consensus 74 ~~v~~~~~d~~~~~~-------~~~~~fD~v~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~ 144 (197)
T 3eey_A 74 DRVTLIKDGHQNMDK-------YIDCPVKAVMFNLGYLPSGDHSIST--RPETTIQALSKAMELLVTGGIITVVIYYGGD 144 (197)
T ss_dssp GGEEEECSCGGGGGG-------TCCSCEEEEEEEESBCTTSCTTCBC--CHHHHHHHHHHHHHHEEEEEEEEEEECCBTT
T ss_pred CCeEEEECCHHHHhh-------hccCCceEEEEcCCcccCccccccc--CcccHHHHHHHHHHhCcCCCEEEEEEccCCC
Confidence 345667777644221 2236899999986431111111100 0112234778888999999999999988753
No 409
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=76.63 E-value=1.7 Score=39.29 Aligned_cols=84 Identities=18% Similarity=0.196 Sum_probs=48.6
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHH-hccCCCeEEEEEe---
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTF-LLKPGGTFVGKIF--- 250 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~-~L~~gG~fv~Kif--- 250 (433)
.++.++++|...... +.......+|+|++|++. . + ....+.-+.+ +|++||.+++-.+
T Consensus 130 ~~v~~~~gD~~~~~~----l~~~~~~~fD~I~~d~~~------~-~-------~~~~l~~~~r~~LkpGG~lv~~d~~~~ 191 (236)
T 2bm8_A 130 ENITLHQGDCSDLTT----FEHLREMAHPLIFIDNAH------A-N-------TFNIMKWAVDHLLEEGDYFIIEDMIPY 191 (236)
T ss_dssp TTEEEEECCSSCSGG----GGGGSSSCSSEEEEESSC------S-S-------HHHHHHHHHHHTCCTTCEEEECSCHHH
T ss_pred CceEEEECcchhHHH----HHhhccCCCCEEEECCch------H-h-------HHHHHHHHHHhhCCCCCEEEEEeCccc
Confidence 467888898876422 122344479999998862 1 1 1234555564 9999999998422
Q ss_pred -ecCC---HHHHHHHHhcccceeEEecCCC
Q psy11646 251 -RSRN---VVCLETKFQIFFENVSIAKPKS 276 (433)
Q Consensus 251 -~g~~---~~~~~~~l~~~F~~v~~~KP~~ 276 (433)
.+.+ ...+.+.....|..+...+|..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~f~~~~~~~~~~ 221 (236)
T 2bm8_A 192 WYRYAPQLFSEYLGAFRDVLSMDMLYANAS 221 (236)
T ss_dssp HHHHCHHHHHHHHHTTTTTEEEETTTTTSC
T ss_pred ccccCHHHHHHHHHhCcccEEEcchhhccc
Confidence 2222 2333333333466655555554
No 410
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=76.59 E-value=2.1 Score=40.63 Aligned_cols=99 Identities=15% Similarity=0.198 Sum_probs=58.7
Q ss_pred cCCCCCC-EEEEECC--CCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEe-cccCCcccccccCc
Q psy11646 29 FKWTDNE-SVLDVGC--GPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVA-NIADQNLESIFLAK 104 (433)
Q Consensus 29 l~~~~~~-~VLDIGc--G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~-Di~~~~l~~~~~~~ 104 (433)
...+++. +||=.|+ |.|..+..+++ . .+ .++++++.+++.++.+++. +.. ..+.. +...........+.
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~-~--~G-a~vi~~~~~~~~~~~~~~l-Ga~--~v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLN-K--RG-YDVVASTGNREAADYLKQL-GAS--EVISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHH-H--HT-CCEEEEESSSSTHHHHHHH-TCS--EEEEHHHHCSSCCCSSCCCC
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHH-H--CC-CEEEEEeCCHHHHHHHHHc-CCc--EEEECCCchHHHHHHhhcCC
Confidence 4456775 8999997 33444433333 2 22 4799999998888888764 211 11111 11000011111246
Q ss_pred EeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 105 FNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 105 fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+|+|+-+-.- ..+....+.+++||++++..
T Consensus 218 ~d~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 218 WQGAVDPVGG-------KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEEEESCCT-------HHHHHHHTTEEEEEEEEECC
T ss_pred ccEEEECCcH-------HHHHHHHHhhcCCCEEEEEe
Confidence 9999876541 25778889999999988753
No 411
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=76.58 E-value=55 Score=32.57 Aligned_cols=154 Identities=15% Similarity=0.100 Sum_probs=78.2
Q ss_pred CEEEEECCCCChhHH-HHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-------------C-----CCCeEEEEecccCC
Q psy11646 35 ESVLDVGCGPGNVTS-KLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-------------T-----NPKLEFVVANIADQ 95 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~-~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-------------~-----~~~i~~~~~Di~~~ 95 (433)
.+|.=||+|.-..+. ..++ ..+ .+|++.|.+++.++.+++.. . .....+ ..|.+.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la---~~G-~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~- 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFA---RVG-ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE- 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHH---TTT-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG-
T ss_pred CEEEEECcCHHHHHHHHHHH---hCC-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH-
Confidence 479999998733321 2232 133 68999999999888775521 0 011122 223211
Q ss_pred cccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeecccc
Q psy11646 96 NLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLLFT 175 (433)
Q Consensus 96 ~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~pl~ 175 (433)
-...|+|+..-. ....-...+++++...++|+..++. .+.......+.... ..-..+...+. +.|..
T Consensus 112 ------~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~s--nTs~~~~~~la~~~--~~~~~~ig~hf--~~P~~ 178 (463)
T 1zcj_A 112 ------LSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCT--NTSALNVDDIASST--DRPQLVIGTHF--FSPAH 178 (463)
T ss_dssp ------GTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEE--CCSSSCHHHHHTTS--SCGGGEEEEEE--CSSTT
T ss_pred ------HCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEe--CCCCcCHHHHHHHh--cCCcceEEeec--CCCcc
Confidence 145799888654 2222235678888888988875543 33332222221111 00011111111 22322
Q ss_pred ---CceEEEccccccchHHHHHHhcCCCCCeEEEe
Q psy11646 176 ---GVIQVQGDITKESTIKEIFSHFDDEKVDLVVF 207 (433)
Q Consensus 176 ---gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvs 207 (433)
-+..+.+.-+++++.+.+...+..-+-..++.
T Consensus 179 ~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v 213 (463)
T 1zcj_A 179 VMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVV 213 (463)
T ss_dssp TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEB
T ss_pred cceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 34566666677777666665554443344444
No 412
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=76.57 E-value=9 Score=33.40 Aligned_cols=97 Identities=9% Similarity=0.126 Sum_probs=60.5
Q ss_pred EEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEccccc
Q psy11646 36 SVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFYCLH 115 (433)
Q Consensus 36 ~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~ 115 (433)
+||=.|+ +|..+..++..+...+ .+|++++.++..+.... ..+++++.+|+.+... ..-+.+|.|+.+....
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~----~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRG-HEVLAVVRDPQKAADRL----GATVATLVKEPLVLTE--ADLDSVDAVVDALSVP 73 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHT----CTTSEEEECCGGGCCH--HHHTTCSEEEECCCCC
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCC-CEEEEEEeccccccccc----CCCceEEecccccccH--hhcccCCEEEECCccC
Confidence 5776765 5666545555444444 79999999987655332 2578999999987543 2225689999877664
Q ss_pred ch----hhHHHHHHHHHHhccC-CCEEEEE
Q psy11646 116 WV----QDQRQAISNIYNLLMP-GGEVLLL 140 (433)
Q Consensus 116 ~~----~d~~~~l~~i~~~Lkp-GG~lll~ 140 (433)
|. ........++.+.++. |+++++.
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 32 1123345666666664 4555554
No 413
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=76.16 E-value=21 Score=33.71 Aligned_cols=194 Identities=13% Similarity=0.045 Sum_probs=100.5
Q ss_pred CEEEEECCCCChhHH-HHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----------C--CC---------CeEEEEecc
Q psy11646 35 ESVLDVGCGPGNVTS-KLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----------T--NP---------KLEFVVANI 92 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~-~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----------~--~~---------~i~~~~~Di 92 (433)
.+|-=||+|.=..+. ..++ ..+ .+|++.|.+++.++.++++. + .. ++++. .|.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la---~~G-~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~ 81 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFA---SGG-FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNL 81 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH---HTT-CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCH
T ss_pred ceEEEEeeCHHHHHHHHHHH---HCC-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCH
Confidence 478888887533221 2222 133 68999999999998886531 0 00 12221 222
Q ss_pred cCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeec
Q psy11646 93 ADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCL 172 (433)
Q Consensus 93 ~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~ 172 (433)
.+ .-...|+|+..-.- ...-...+++++...++|+..++ +....-+...+...+. .-.++. ...++.
T Consensus 82 ~e------av~~aDlVieavpe-~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~i~~~~la~~~~---~~~r~i--g~Hp~~ 148 (319)
T 2dpo_A 82 AE------AVEGVVHIQECVPE-NLDLKRKIFAQLDSIVDDRVVLS-SSSSCLLPSKLFTGLA---HVKQCI--VAHPVN 148 (319)
T ss_dssp HH------HTTTEEEEEECCCS-CHHHHHHHHHHHHTTCCSSSEEE-ECCSSCCHHHHHTTCT---TGGGEE--EEEECS
T ss_pred HH------HHhcCCEEEEeccC-CHHHHHHHHHHHHhhCCCCeEEE-EeCCChHHHHHHHhcC---CCCCeE--EeecCC
Confidence 11 11457998876541 11123567888888898887544 2222223222221111 111111 112222
Q ss_pred cc---cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEE
Q psy11646 173 LF---TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKI 249 (433)
Q Consensus 173 pl---~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Ki 249 (433)
|. +.+..+.+..+++++.+.+...+..-+-..+... ++..|. ...++..+.++=|.+++..||
T Consensus 149 P~~~~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~--~~~~Gf------i~Nrll~a~~~EA~~l~~~g~------ 214 (319)
T 2dpo_A 149 PPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVL--KEIDGF------VLNRLQYAIISEAWRLVEEGI------ 214 (319)
T ss_dssp STTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECS--SCCTTT------THHHHHHHHHHHHHHHHHTTS------
T ss_pred chhhcceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEEC--CCcCCc------hHHHHHHHHHHHHHHHHHhCC------
Confidence 22 2344566667777777777666665555544432 223343 345555666777777777776
Q ss_pred eecCCHHHHHHHHh
Q psy11646 250 FRSRNVVCLETKFQ 263 (433)
Q Consensus 250 f~g~~~~~~~~~l~ 263 (433)
-+.+.+...++
T Consensus 215 ---~~~~~id~a~~ 225 (319)
T 2dpo_A 215 ---VSPSDLDLVMS 225 (319)
T ss_dssp ---SCHHHHHHHHH
T ss_pred ---CCHHHHHHHHH
Confidence 24555555553
No 414
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=75.56 E-value=6.9 Score=35.31 Aligned_cols=80 Identities=11% Similarity=0.008 Sum_probs=49.6
Q ss_pred CCCEEEEECCCCChhHHHHhcccCC-CCCcEEEEEeCCHHHHHHHHhhc--CCCCeEEEEecccCCcc-cccc------c
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLP-KSVVKLVGLDVSPNMIKHAKNHH--TNPKLEFVVANIADQNL-ESIF------L 102 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~-~~~~~v~gvDiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l-~~~~------~ 102 (433)
.+.+||=.| |+|..+..++..+.. .+ .+|++++.++..++.+.+.+ ...++.++.+|+.+..- .... .
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSS-SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcC-CeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 356777666 556666455544444 34 69999999987666554443 23568899999876321 1111 1
Q ss_pred CcEeEEEEcccc
Q psy11646 103 AKFNKIFSFYCL 114 (433)
Q Consensus 103 ~~fD~Vis~~~l 114 (433)
+.+|+|+.+...
T Consensus 81 g~id~li~~Ag~ 92 (276)
T 1wma_A 81 GGLDVLVNNAGI 92 (276)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 379999976543
No 415
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=75.51 E-value=6.6 Score=32.57 Aligned_cols=101 Identities=16% Similarity=0.140 Sum_probs=54.2
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc-ccccccCcEeEEEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN-LESIFLAKFNKIFS 110 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~-l~~~~~~~fD~Vis 110 (433)
.++.+|+=+|+| .++..++..+...+ .+|+++|.++..++.+++ ..+..+..+|..+.. +.......+|+|+.
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASSSG-HSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence 357899999875 44422322222233 589999999876554431 134556666654321 11111246899888
Q ss_pred cccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 111 FYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 111 ~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.-.-. .....+..+.+.+.+...++...
T Consensus 91 ~~~~~---~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 91 FTNDD---STNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp CSSCH---HHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EeCCc---HHHHHHHHHHHHHCCCCeEEEEE
Confidence 65422 12233444455555555655543
No 416
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=74.62 E-value=21 Score=32.41 Aligned_cols=70 Identities=13% Similarity=0.187 Sum_probs=51.4
Q ss_pred CEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEcccc
Q psy11646 35 ESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFYCL 114 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l 114 (433)
.+||=.| + |..+..++..+...+ .+|++++.++........ .+++++.+|+.+.. ...+|.|+.....
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~-----~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQG-WRIIGTSRNPDQMEAIRA----SGAEPLLWPGEEPS-----LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGT-CEEEEEESCGGGHHHHHH----TTEEEEESSSSCCC-----CTTCCEEEECCCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCC-CEEEEEEcChhhhhhHhh----CCCeEEEecccccc-----cCCCCEEEECCCc
Confidence 5899999 4 888866666555554 799999999876655443 47899999998743 2578999987765
Q ss_pred cc
Q psy11646 115 HW 116 (433)
Q Consensus 115 ~~ 116 (433)
..
T Consensus 74 ~~ 75 (286)
T 3ius_A 74 DS 75 (286)
T ss_dssp BT
T ss_pred cc
Confidence 43
No 417
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=74.59 E-value=9.1 Score=33.02 Aligned_cols=73 Identities=14% Similarity=0.079 Sum_probs=51.1
Q ss_pred CceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCH
Q psy11646 176 GVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNV 255 (433)
Q Consensus 176 gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~ 255 (433)
++.+.++|+.+. ....+|+|+++... +.....+.-+.++|++||.+++-.+.....
T Consensus 110 ~v~~~~~d~~~~----------~~~~fD~i~~~~~~--------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 165 (205)
T 3grz_A 110 DIALQKTSLLAD----------VDGKFDLIVANILA--------------EILLDLIPQLDSHLNEDGQVIFSGIDYLQL 165 (205)
T ss_dssp CCEEEESSTTTT----------CCSCEEEEEEESCH--------------HHHHHHGGGSGGGEEEEEEEEEEEEEGGGH
T ss_pred ceEEEecccccc----------CCCCceEEEECCcH--------------HHHHHHHHHHHHhcCCCCEEEEEecCcccH
Confidence 367777776542 23579999987532 123556777788999999999987777777
Q ss_pred HHHHHHHhcc-cceeEEe
Q psy11646 256 VCLETKFQIF-FENVSIA 272 (433)
Q Consensus 256 ~~~~~~l~~~-F~~v~~~ 272 (433)
..+...++.. |+.+.+.
T Consensus 166 ~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 166 PKIEQALAENSFQIDLKM 183 (205)
T ss_dssp HHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHcCCceEEee
Confidence 7777777543 7776654
No 418
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=74.47 E-value=2.1 Score=42.81 Aligned_cols=97 Identities=10% Similarity=0.132 Sum_probs=60.1
Q ss_pred cCCCCCCEEEEECC-C-CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc----------
Q psy11646 29 FKWTDNESVLDVGC-G-PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN---------- 96 (433)
Q Consensus 29 l~~~~~~~VLDIGc-G-~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~---------- 96 (433)
...++|.+||=+|+ | .|..+..++ +. .+ .++++++.+++-++.+++.- .. .++ |..+..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqla-k~--~G-a~vi~~~~~~~~~~~~~~lG-a~--~vi--~~~~~d~~~~~~~~~~ 294 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFA-LA--GG-ANPICVVSSPQKAEICRAMG-AE--AII--DRNAEGYRFWKDENTQ 294 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHH-HH--TT-CEEEEEESSHHHHHHHHHHT-CC--EEE--ETTTTTCCSEEETTEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHH-HH--cC-CeEEEEECCHHHHHHHHhhC-Cc--EEE--ecCcCccccccccccc
Confidence 45678999999997 3 344443333 32 23 58899999999999997752 11 111 211110
Q ss_pred -----------cccc-ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 97 -----------LESI-FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 97 -----------l~~~-~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+... ....+|+|+-+-.- ..+....++|++||++++..
T Consensus 295 ~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 295 DPKEWKRFGKRIRELTGGEDIDIVFEHPGR-------ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp CHHHHHHHHHHHHHHHTSCCEEEEEECSCH-------HHHHHHHHHEEEEEEEEESC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEcCCc-------hhHHHHHHHhhCCcEEEEEe
Confidence 0110 11479999875441 46777889999999988753
No 419
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=74.12 E-value=3.1 Score=41.43 Aligned_cols=101 Identities=13% Similarity=0.010 Sum_probs=59.6
Q ss_pred cCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCe-EEEEecccCC----------
Q psy11646 29 FKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKL-EFVVANIADQ---------- 95 (433)
Q Consensus 29 l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i-~~~~~Di~~~---------- 95 (433)
...+++.+||=.|++ .|..+..+++ . .+ .++++++.+++.++.+++. +...+ .....|....
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~-~--~G-a~vi~~~~~~~~~~~~~~l-Ga~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVK-N--GG-GIPVAVVSSAQKEAAVRAL-GCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHH-H--TT-CEEEEEESSHHHHHHHHHT-TCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHH-H--cC-CEEEEEeCCHHHHHHHHhc-CCCEEEecccccccccccccccccch
Confidence 556789999999973 3444433333 2 23 5899999999999998764 22111 1000111000
Q ss_pred -------cccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 96 -------NLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 96 -------~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.+.......+|+|+-+-.- ..+....++|++||+++...
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEe
Confidence 0001112469999876552 25677788999999988753
No 420
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=73.80 E-value=12 Score=34.32 Aligned_cols=81 Identities=10% Similarity=0.089 Sum_probs=52.0
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCC-cc-ccc------c
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQ-NL-ESI------F 101 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~-~l-~~~------~ 101 (433)
.+.+||=.|++.| ++..++..+...+ .+|++++.++..++.+.+.+ ...++.++.+|+.+. .. ... .
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNG-IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3567887776654 4434444443344 69999999988776665554 235789999999874 21 111 1
Q ss_pred cCcEeEEEEccccc
Q psy11646 102 LAKFNKIFSFYCLH 115 (433)
Q Consensus 102 ~~~fD~Vis~~~l~ 115 (433)
.+..|+++.+....
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 25789999887653
No 421
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=73.45 E-value=46 Score=31.19 Aligned_cols=91 Identities=20% Similarity=0.131 Sum_probs=54.8
Q ss_pred CCEEEEECCCCChhH-HHHhcccCCCCCc--EEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEE
Q psy11646 34 NESVLDVGCGPGNVT-SKLLLPNLPKSVV--KLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFS 110 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~-~~~l~~~~~~~~~--~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis 110 (433)
..+|.=||+|.=..+ ...+.. .+ . +|++.|.+++.++.+++.- -+.-...|..+. .....|+|+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~---~G-~~~~V~~~dr~~~~~~~a~~~G---~~~~~~~~~~~~-----~~~~aDvVil 100 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR---SG-FKGKIYGYDINPESISKAVDLG---IIDEGTTSIAKV-----EDFSPDFVML 100 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH---TT-CCSEEEEECSCHHHHHHHHHTT---SCSEEESCTTGG-----GGGCCSEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHh---CC-CCCEEEEEECCHHHHHHHHHCC---CcchhcCCHHHH-----hhccCCEEEE
Confidence 468999997743221 122221 23 4 8999999999888887642 111112222210 1145799998
Q ss_pred cccccchhhHHHHHHHHHHhccCCCEEEE
Q psy11646 111 FYCLHWVQDQRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 111 ~~~l~~~~d~~~~l~~i~~~LkpGG~lll 139 (433)
.-.... ...+++++...++||..++-
T Consensus 101 avp~~~---~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 101 SSPVRT---FREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp CSCGGG---HHHHHHHHHHHSCTTCEEEE
T ss_pred eCCHHH---HHHHHHHHhhccCCCcEEEE
Confidence 766443 45678888889998876543
No 422
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=72.42 E-value=13 Score=36.01 Aligned_cols=84 Identities=17% Similarity=0.114 Sum_probs=49.1
Q ss_pred CCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC--H-HHHHHHHhcccceeEEecCC
Q psy11646 199 DEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN--V-VCLETKFQIFFENVSIAKPK 275 (433)
Q Consensus 199 ~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~--~-~~~~~~l~~~F~~v~~~KP~ 275 (433)
...+|+|+.|......|... .+....+.....+..+...|+|||.+++-.-...- . ..+..+++.+|..|...|=.
T Consensus 265 ~~~fDvII~D~~d~P~~~~p-~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~~~~~ 343 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSP-EEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEI 343 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC-----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCc-hhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEEeeEe
Confidence 46799999997531111111 11223344445556678999999999886543322 2 33444599999999985533
Q ss_pred CCcccccc
Q psy11646 276 SSRNSSIE 283 (433)
Q Consensus 276 ~sr~~s~E 283 (433)
+.-++..|
T Consensus 344 ~~vPsy~~ 351 (364)
T 2qfm_A 344 VCVPSYLE 351 (364)
T ss_dssp ECCGGGSS
T ss_pred eecCCchh
Confidence 33334334
No 423
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.06 E-value=14 Score=33.79 Aligned_cols=106 Identities=13% Similarity=0.137 Sum_probs=63.3
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCC------------HHHHHHHHhhc--CCCCeEEEEecccCCccc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVS------------PNMIKHAKNHH--TNPKLEFVVANIADQNLE 98 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS------------~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~ 98 (433)
.+.+||=.|++.|- +..++..+...+ .+|+.+|.+ ...++.+.... ...++.++.+|+.+..--
T Consensus 9 ~gk~vlVTGas~gI-G~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQ-GRSHAVKLAEEG-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTT-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChH-HHHHHHHHHHCC-CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 46788888877653 324444333344 799999987 55555554433 346788999999764211
Q ss_pred -cc------ccCcEeEEEEcccccc------hhhHH-----------HHHHHHHHhccCCCEEEEE
Q psy11646 99 -SI------FLAKFNKIFSFYCLHW------VQDQR-----------QAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 99 -~~------~~~~fD~Vis~~~l~~------~~d~~-----------~~l~~i~~~LkpGG~lll~ 140 (433)
.. ..+..|+++.+..... .++++ .+.+.+...++.+|.++..
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 10 1147899998765422 11222 2345566667778887765
No 424
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=71.65 E-value=8.5 Score=32.63 Aligned_cols=113 Identities=18% Similarity=0.179 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc
Q psy11646 18 AAKLLSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL 97 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l 97 (433)
.+..|++.+......+ +-|||+|-|.|..- ..++..+|.. +++.+|-.-..-. -...+.-.++++|+.+. +
T Consensus 26 QR~~L~~a~~~v~~~~-GpVlElGLGNGRTy-dHLRe~~P~R--~I~vfDR~~~~hp----~~~P~~e~~ilGdi~~t-L 96 (174)
T 3iht_A 26 QRACLEHAIAQTAGLS-GPVYELGLGNGRTY-HHLRQHVQGR--EIYVFERAVASHP----DSTPPEAQLILGDIRET-L 96 (174)
T ss_dssp HHHHHHHHHHHTTTCC-SCEEEECCTTCHHH-HHHHHHCCSS--CEEEEESSCCCCG----GGCCCGGGEEESCHHHH-H
T ss_pred HHHHHHHHHHHhcCCC-CceEEecCCCChhH-HHHHHhCCCC--cEEEEEeeeccCC----CCCCchHheecccHHHH-H
Confidence 4567777777775444 46999999999876 7778888876 8888885321100 00112334667776553 2
Q ss_pred cc---cccCcEeEEEEcccccchhhH----HHHHHHHHHhccCCCEEEE
Q psy11646 98 ES---IFLAKFNKIFSFYCLHWVQDQ----RQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 98 ~~---~~~~~fD~Vis~~~l~~~~d~----~~~l~~i~~~LkpGG~lll 139 (433)
+. ......-++..-...+.-+.- ..+-.-+..+|.|||.++-
T Consensus 97 ~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 97 PATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 21 122344444443333332211 1123456788999998764
No 425
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=71.34 E-value=35 Score=31.28 Aligned_cols=184 Identities=11% Similarity=0.089 Sum_probs=94.0
Q ss_pred CEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--------------CC-------CCeEEEEeccc
Q psy11646 35 ESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--------------TN-------PKLEFVVANIA 93 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--------------~~-------~~i~~~~~Di~ 93 (433)
.+|.=||+|.-... ++......+ .+|++.|.+++.++.+++.. .. .++.. ..|..
T Consensus 5 ~kV~VIGaG~mG~~--iA~~la~~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 5 TNVTVLGTGVLGSQ--IAFQTAFHG-FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTT-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CEEEEECCCHHHHH--HHHHHHhCC-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 46888888753322 222111233 69999999999988887652 00 01221 12221
Q ss_pred CCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeecc
Q psy11646 94 DQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLL 173 (433)
Q Consensus 94 ~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~p 173 (433)
+ .-...|+|+..-.-. ..-...+++++...++|+..++ +..+.-+.......+... ..+...+ .+.|
T Consensus 81 ~------~~~~aDlVi~av~~~-~~~~~~v~~~l~~~~~~~~il~-s~tS~~~~~~la~~~~~~---~~~ig~h--~~~p 147 (283)
T 4e12_A 81 Q------AVKDADLVIEAVPES-LDLKRDIYTKLGELAPAKTIFA-TNSSTLLPSDLVGYTGRG---DKFLALH--FANH 147 (283)
T ss_dssp H------HTTTCSEEEECCCSC-HHHHHHHHHHHHHHSCTTCEEE-ECCSSSCHHHHHHHHSCG---GGEEEEE--ECSS
T ss_pred H------HhccCCEEEEeccCc-HHHHHHHHHHHHhhCCCCcEEE-ECCCCCCHHHHHhhcCCC---cceEEEc--cCCC
Confidence 1 114579988765422 2234567888888998877543 322233333333322211 1111111 1222
Q ss_pred ---ccCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC
Q psy11646 174 ---FTGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG 243 (433)
Q Consensus 174 ---l~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG 243 (433)
.+.+..+.+..++.++.+.+...+..-+-..+... ++..|. ...++..+.++-|.+++..||
T Consensus 148 ~~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~--~~~~g~------i~nr~~~~~~~ea~~l~~~g~ 212 (283)
T 4e12_A 148 VWVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELK--KEKAGY------VLNSLLVPLLDAAAELLVDGI 212 (283)
T ss_dssp TTTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECS--SCCTTT------THHHHHHHHHHHHHHHHHTTS
T ss_pred cccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEe--cCCCCE------EehHHHHHHHHHHHHHHHhCC
Confidence 23344556666677777777666665555555442 223332 334444555666666666664
No 426
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=70.98 E-value=9.2 Score=36.37 Aligned_cols=83 Identities=14% Similarity=0.209 Sum_probs=53.8
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCC-CCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPK-SVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSF 111 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~-~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~ 111 (433)
.+.+||=.|+ +|.++..++..+... +..+|++++.++......++.+...++.++.+|+.+...-...-..+|+|+.+
T Consensus 20 ~~k~vlVTGa-tG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~ 98 (344)
T 2gn4_A 20 DNQTILITGG-TGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA 98 (344)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence 4678887764 566665555544444 42389999999877665555443468999999998642111112468999987
Q ss_pred ccccc
Q psy11646 112 YCLHW 116 (433)
Q Consensus 112 ~~l~~ 116 (433)
..+.+
T Consensus 99 Aa~~~ 103 (344)
T 2gn4_A 99 AALKH 103 (344)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 76544
No 427
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=70.98 E-value=7.7 Score=38.33 Aligned_cols=99 Identities=15% Similarity=0.132 Sum_probs=61.6
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-cccCcEeEEEEcc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-IFLAKFNKIFSFY 112 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-~~~~~fD~Vis~~ 112 (433)
..+|+=+|+|. ++..+...+...+ ..|+++|.+++.++.+++. ++.++.+|..+...-. ..-...|+|++..
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~g-~~vvvId~d~~~v~~~~~~----g~~vi~GDat~~~~L~~agi~~A~~viv~~ 76 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSSG-VKMVVLDHDPDHIETLRKF----GMKVFYGDATRMDLLESAGAAKAEVLINAI 76 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTT-CCEEEEECCHHHHHHHHHT----TCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCC-CCEEEEECCHHHHHHHHhC----CCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence 45788888754 5433332222233 6899999999999988863 5677889987643221 1235688888754
Q ss_pred cccchhhHHHHHHHHHHhccCCCEEEEEec
Q psy11646 113 CLHWVQDQRQAISNIYNLLMPGGEVLLLLN 142 (433)
Q Consensus 113 ~l~~~~d~~~~l~~i~~~LkpGG~lll~~~ 142 (433)
.- ......+....+.+.|...++.-..
T Consensus 77 ~~---~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 77 DD---PQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp SS---HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CC---hHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 31 1122334556667778877766543
No 428
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=70.95 E-value=4.8 Score=40.04 Aligned_cols=75 Identities=15% Similarity=0.263 Sum_probs=48.0
Q ss_pred CCEEEEECCCCChhHHHHhcccC--CCCCcEEEEEeCCHHHHHHHHhhcC------CCCeEEEEecccCCcccccccCcE
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNL--PKSVVKLVGLDVSPNMIKHAKNHHT------NPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~--~~~~~~v~gvDiS~~~l~~A~~~~~------~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
..+|+|+|+|+|.+...+|.... .....+|+.+|+|+.+.+.-++++. ..++.|.. + ++ +.+
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~v~W~~----~--lP----~~~ 207 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQAPGLAARVRWLD----A--LP----ERF 207 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHSTTTGGGEEEES----S--CC----SCE
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccccccCCCceecc----c--CC----ccC
Confidence 46999999999998877765321 1111389999999988777666651 12455531 1 22 334
Q ss_pred e-EEEEcccccchh
Q psy11646 106 N-KIFSFYCLHWVQ 118 (433)
Q Consensus 106 D-~Vis~~~l~~~~ 118 (433)
. +|+++..+..++
T Consensus 208 ~g~iiANE~fDAlP 221 (432)
T 4f3n_A 208 EGVVVGNEVLDAMP 221 (432)
T ss_dssp EEEEEEESCGGGSC
T ss_pred ceEEEeehhhccCc
Confidence 4 677777666553
No 429
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=70.84 E-value=2.4 Score=38.99 Aligned_cols=55 Identities=11% Similarity=-0.003 Sum_probs=35.5
Q ss_pred EEEEecccCCcccccccCcEeEEEEcccccch--------------hhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 86 EFVVANIADQNLESIFLAKFNKIFSFYCLHWV--------------QDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 86 ~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~--------------~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
.++++|.... +.....++||+|+.-.....- .-....+.++.++|+|||.+++..
T Consensus 6 ~l~~gD~~~~-l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 6 KIHQMNCFDF-LDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SEEECCHHHH-HHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEechHHHH-HHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 4566665432 222233678888886665321 134567888999999999988753
No 430
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=70.60 E-value=1 Score=43.31 Aligned_cols=69 Identities=10% Similarity=0.000 Sum_probs=43.7
Q ss_pred cEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccccc-----ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCC
Q psy11646 61 VKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESI-----FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGG 135 (433)
Q Consensus 61 ~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~-----~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG 135 (433)
.+|++++.+++-++.+++.- .. .. .|..+..+.+. ....+|+|+-+-.- ..+....+.|+++|
T Consensus 190 a~Vi~~~~~~~~~~~~~~~G-a~--~~--~~~~~~~~~~~v~~~~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G 257 (349)
T 3pi7_A 190 FRPIVTVRRDEQIALLKDIG-AA--HV--LNEKAPDFEATLREVMKAEQPRIFLDAVTG-------PLASAIFNAMPKRA 257 (349)
T ss_dssp CEEEEEESCGGGHHHHHHHT-CS--EE--EETTSTTHHHHHHHHHHHHCCCEEEESSCH-------HHHHHHHHHSCTTC
T ss_pred CEEEEEeCCHHHHHHHHHcC-CC--EE--EECCcHHHHHHHHHHhcCCCCcEEEECCCC-------hhHHHHHhhhcCCC
Confidence 59999999999999888652 11 12 23222222210 01369999876542 12466788999999
Q ss_pred EEEEEe
Q psy11646 136 EVLLLL 141 (433)
Q Consensus 136 ~lll~~ 141 (433)
+++...
T Consensus 258 ~iv~~G 263 (349)
T 3pi7_A 258 RWIIYG 263 (349)
T ss_dssp EEEECC
T ss_pred EEEEEe
Confidence 988764
No 431
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=69.43 E-value=4.8 Score=38.94 Aligned_cols=93 Identities=17% Similarity=0.155 Sum_probs=56.6
Q ss_pred CCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----cccCcE
Q psy11646 32 TDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----IFLAKF 105 (433)
Q Consensus 32 ~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~~~~~f 105 (433)
+++.+||=+|++ .|..+..+++ . .+ .+++++. +++-++.+++.- . -.++ |..+..+.+ ...+.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~-~--~G-a~Vi~~~-~~~~~~~~~~lG-a--~~vi--~~~~~~~~~~v~~~t~g~~ 232 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLR-L--SG-YIPIATC-SPHNFDLAKSRG-A--EEVF--DYRAPNLAQTIRTYTKNNL 232 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHH-H--TT-CEEEEEE-CGGGHHHHHHTT-C--SEEE--ETTSTTHHHHHHHHTTTCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHH-H--CC-CEEEEEe-CHHHHHHHHHcC-C--cEEE--ECCCchHHHHHHHHccCCc
Confidence 678999999984 5666644433 3 23 4788885 888888887652 1 1122 222221111 112459
Q ss_pred eEEEEcccccchhhHHHHHHHHHHhc-cCCCEEEEE
Q psy11646 106 NKIFSFYCLHWVQDQRQAISNIYNLL-MPGGEVLLL 140 (433)
Q Consensus 106 D~Vis~~~l~~~~d~~~~l~~i~~~L-kpGG~lll~ 140 (433)
|+|+-.-.- ...+....+.| ++||+++..
T Consensus 233 d~v~d~~g~------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 233 RYALDCITN------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp CEEEESSCS------HHHHHHHHHHSCTTCEEEEES
T ss_pred cEEEECCCc------hHHHHHHHHHhhcCCCEEEEE
Confidence 999875442 24566777888 699998765
No 432
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=68.93 E-value=3.3 Score=40.46 Aligned_cols=101 Identities=9% Similarity=0.155 Sum_probs=55.1
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEcc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFY 112 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~ 112 (433)
++.+|+=+|+| ..+..+++.....+ .+|+++|.++..++.+++.++. .+.....+.. .+.+. -...|+|+..-
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~G-a~V~~~d~~~~~l~~~~~~~g~-~~~~~~~~~~--~l~~~-l~~aDvVi~~~ 239 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGMG-ATVTVLDINIDKLRQLDAEFCG-RIHTRYSSAY--ELEGA-VKRADLVIGAV 239 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTT-SSEEEECCHH--HHHHH-HHHCSEEEECC
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhcCC-eeEeccCCHH--HHHHH-HcCCCEEEECC
Confidence 57899999984 44423322222233 5899999999988888775421 1211111111 11111 13579998844
Q ss_pred cccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 113 CLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 113 ~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
.....+.+.-..++..+.+||||.++..
T Consensus 240 ~~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 240 LVPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp CCTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CcCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 3221111111234566789999987754
No 433
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=68.75 E-value=22 Score=33.20 Aligned_cols=96 Identities=13% Similarity=0.120 Sum_probs=57.7
Q ss_pred HhcCCCCCCEEEEEC-CCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc-ccccccC
Q psy11646 27 DQFKWTDNESVLDVG-CGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN-LESIFLA 103 (433)
Q Consensus 27 ~~l~~~~~~~VLDIG-cG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~-l~~~~~~ 103 (433)
+....+++.+||=+| +|. |..+..+ ++.. + .++++++ ++...+.+++.- .. .. .|..+.. +.+ ...
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~-a~~~--G-a~vi~~~-~~~~~~~~~~lG-a~--~~--i~~~~~~~~~~-~~~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQL-AKQK--G-TTVITTA-SKRNHAFLKALG-AE--QC--INYHEEDFLLA-IST 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHH-HHHT--T-CEEEEEE-CHHHHHHHHHHT-CS--EE--EETTTSCHHHH-CCS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHH-HHHc--C-CEEEEEe-ccchHHHHHHcC-CC--EE--EeCCCcchhhh-hcc
Confidence 556678999999986 443 4444333 3332 3 5888887 555577777652 11 11 2333322 221 115
Q ss_pred cEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 104 KFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 104 ~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
.+|+|+-.-.- ..+....++|+++|+++..
T Consensus 215 g~D~v~d~~g~-------~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 215 PVDAVIDLVGG-------DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp CEEEEEESSCH-------HHHHHHGGGEEEEEEEEEC
T ss_pred CCCEEEECCCc-------HHHHHHHHhccCCCEEEEe
Confidence 69999875441 2237788999999998875
No 434
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=67.98 E-value=35 Score=30.96 Aligned_cols=102 Identities=10% Similarity=0.054 Sum_probs=57.9
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCch--------------hHHHHHHHHHHHHHHHHHhcc
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDL--------------DEHLQGLLLIGALNITTFLLK 240 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~--------------D~~~~~~L~~~al~ia~~~L~ 240 (433)
+.+.+.++|+.+. +....+|+|+++..-...+...+ ...-........+.-+..+|+
T Consensus 159 ~~v~~~~~d~~~~---------~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lk 229 (276)
T 2b3t_A 159 KNIHILQSDWFSA---------LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV 229 (276)
T ss_dssp CSEEEECCSTTGG---------GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE
T ss_pred CceEEEEcchhhh---------cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcC
Confidence 3577778877553 22457999999743211111000 001112334567778889999
Q ss_pred CCCeEEEEEeecCCHHHHHHHHhc-ccceeEEecCCCCcccccceeEEEee
Q psy11646 241 PGGTFVGKIFRSRNVVCLETKFQI-FFENVSIAKPKSSRNSSIESFIVCQN 290 (433)
Q Consensus 241 ~gG~fv~Kif~g~~~~~~~~~l~~-~F~~v~~~KP~~sr~~s~E~~~v~~~ 290 (433)
+||.+++.+-. .....+...++. -|..+.+.+..+. .+.+++++.
T Consensus 230 pgG~l~~~~~~-~~~~~~~~~l~~~Gf~~v~~~~d~~g----~~r~~~~~~ 275 (276)
T 2b3t_A 230 SGGFLLLEHGW-QQGEAVRQAFILAGYHDVETCRDYGD----NERVTLGRY 275 (276)
T ss_dssp EEEEEEEECCS-SCHHHHHHHHHHTTCTTCCEEECTTS----SEEEEEEEC
T ss_pred CCCEEEEEECc-hHHHHHHHHHHHCCCcEEEEEecCCC----CCcEEEEEE
Confidence 99999886422 223444444433 4888888776554 345666654
No 435
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=67.84 E-value=4 Score=38.91 Aligned_cols=57 Identities=12% Similarity=0.131 Sum_probs=39.0
Q ss_pred CeEEE-EecccCCcccccccCcEeEEEEccccc-----------chhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 84 KLEFV-VANIADQNLESIFLAKFNKIFSFYCLH-----------WVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 84 ~i~~~-~~Di~~~~l~~~~~~~fD~Vis~~~l~-----------~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
...++ ++|.... +.....++||+|+.-.... ++......+.++.++|+|||.+++..
T Consensus 38 ~~~l~i~gD~l~~-L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 38 TRHVYDVCDCLDT-LAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEEECCHHHH-HHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEECCcHHHH-HHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 34566 7887542 2222347899999977653 22335677888999999999998864
No 436
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=67.74 E-value=16 Score=31.75 Aligned_cols=96 Identities=9% Similarity=0.067 Sum_probs=55.3
Q ss_pred EEEEECCCCChhHHHHhcccC-CCCCcEEEEEeCCHH-HHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEccc
Q psy11646 36 SVLDVGCGPGNVTSKLLLPNL-PKSVVKLVGLDVSPN-MIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFYC 113 (433)
Q Consensus 36 ~VLDIGcG~G~~~~~~l~~~~-~~~~~~v~gvDiS~~-~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~ 113 (433)
+||=.|+ +|..+..++..+. ..+ .+|++++.++. .++.... ...++.++.+|+.+...-...-...|+|+.+..
T Consensus 7 ~vlVtGa-sg~iG~~~~~~l~~~~g-~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 7 YITILGA-AGQIAQXLTATLLTYTD-MHITLYGRQLKTRIPPEII--DHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp EEEEEST-TSHHHHHHHHHHHHHCC-CEEEEEESSHHHHSCHHHH--TSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred EEEEEeC-CcHHHHHHHHHHHhcCC-ceEEEEecCccccchhhcc--CCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence 4887774 4555544544443 344 69999999987 5544321 235789999999763211111246799998776
Q ss_pred ccchhhHHHHHHHHHHhccC-C-CEEEEE
Q psy11646 114 LHWVQDQRQAISNIYNLLMP-G-GEVLLL 140 (433)
Q Consensus 114 l~~~~d~~~~l~~i~~~Lkp-G-G~lll~ 140 (433)
...+. .+++.+.++. | |+++..
T Consensus 83 ~~n~~-----~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 83 ESGSD-----MASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp CCHHH-----HHHHHHHHHHTTCCEEEEE
T ss_pred CCChh-----HHHHHHHHHhcCCCeEEEE
Confidence 54322 3444444432 2 455544
No 437
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=67.73 E-value=19 Score=32.42 Aligned_cols=107 Identities=7% Similarity=0.070 Sum_probs=62.8
Q ss_pred CCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---CCCCeEEEEecccCCccc-cc------
Q psy11646 33 DNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---TNPKLEFVVANIADQNLE-SI------ 100 (433)
Q Consensus 33 ~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~~~~i~~~~~Di~~~~l~-~~------ 100 (433)
.+.++|=.|++ .|--. .++..+...+ .+|+.++.++...+.+++.. ...++.++.+|+.+..-- ..
T Consensus 6 ~~k~vlVTGasg~~GIG~-~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAW-GIARSLHEAG-ARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHH-HHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHH-HHHHHHHHCC-CEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 46788989876 33322 3333333344 68999998875554444433 334789999999874311 11
Q ss_pred ccCcEeEEEEcccccc----------h--hhHH-----------HHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHW----------V--QDQR-----------QAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~----------~--~d~~-----------~~l~~i~~~LkpGG~lll~~ 141 (433)
..+..|+++.+..... . ++.. .+.+.+...++++|.++...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 1147899988765432 1 1111 23456667777788877754
No 438
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=67.57 E-value=13 Score=33.38 Aligned_cols=72 Identities=29% Similarity=0.349 Sum_probs=48.6
Q ss_pred ceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCHH
Q psy11646 177 VIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNVV 256 (433)
Q Consensus 177 v~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~~ 256 (433)
+...++|+.+. +....+|+|+++.... ...+.-+..+|++||.+++-........
T Consensus 147 v~~~~~d~~~~---------~~~~~~D~v~~~~~~~----------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 201 (255)
T 3mb5_A 147 VTIKLKDIYEG---------IEEENVDHVILDLPQP----------------ERVVEHAAKALKPGGFFVAYTPCSNQVM 201 (255)
T ss_dssp EEEECSCGGGC---------CCCCSEEEEEECSSCG----------------GGGHHHHHHHEEEEEEEEEEESSHHHHH
T ss_pred eEEEECchhhc---------cCCCCcCEEEECCCCH----------------HHHHHHHHHHcCCCCEEEEEECCHHHHH
Confidence 66667776532 4456799999975421 2456777889999999988655444556
Q ss_pred HHHHHHhcc---cceeEEec
Q psy11646 257 CLETKFQIF---FENVSIAK 273 (433)
Q Consensus 257 ~~~~~l~~~---F~~v~~~K 273 (433)
.+...++.. |..+.+..
T Consensus 202 ~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 202 RLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp HHHHHHHHTGGGBSCCEEEC
T ss_pred HHHHHHHHcCCCccccEEEE
Confidence 666666554 87776653
No 439
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=66.92 E-value=15 Score=34.12 Aligned_cols=108 Identities=11% Similarity=0.071 Sum_probs=62.6
Q ss_pred CCCEEEEECCCCC-hhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcc-ccc------ccC
Q psy11646 33 DNESVLDVGCGPG-NVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNL-ESI------FLA 103 (433)
Q Consensus 33 ~~~~VLDIGcG~G-~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l-~~~------~~~ 103 (433)
.+.++|=.|++.| ..+..++..+...+ .+|+.++.++...+.+++.. ...++.++.+|+.+..- ... ..+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAG-AELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTT-CEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4678999997743 22323333222244 68999999876554444332 12468889999976421 111 125
Q ss_pred cEeEEEEcccccc----------h--hhH-----------HHHHHHHHHhccCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLHW----------V--QDQ-----------RQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~~----------~--~d~-----------~~~l~~i~~~LkpGG~lll~~ 141 (433)
..|+++.+..+.. . +++ -.+.+.+.+.++.+|.++...
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 7899998765432 0 111 123455666777788877754
No 440
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=66.74 E-value=68 Score=32.16 Aligned_cols=181 Identities=12% Similarity=0.045 Sum_probs=91.1
Q ss_pred CEEEEECCCCChhHH-HHhcccCCCCCcEEEEEeCCHHHHHHHHhhc--------CCC------------CeEEEEeccc
Q psy11646 35 ESVLDVGCGPGNVTS-KLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH--------TNP------------KLEFVVANIA 93 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~-~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~--------~~~------------~i~~~~~Di~ 93 (433)
.+|-=||+|.-..++ ..++ ..+ ..|++.|.+++.++.+++.. ... ++++ ..|.+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la---~aG-~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~ 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAA---SHG-HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIH 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHH---HTT-CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGG
T ss_pred CEEEEECcCHHHHHHHHHHH---HCC-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHH
Confidence 367778887633221 2222 133 68999999999998877631 111 2222 12222
Q ss_pred CCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeecc
Q psy11646 94 DQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLL 173 (433)
Q Consensus 94 ~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~p 173 (433)
. + ...|+|+..-. ....-...+++++...++|+..++... +.-+...+...+ ....++... ..+.|
T Consensus 81 ~--~-----~~aDlVIeAVp-e~~~vk~~v~~~l~~~~~~~~Ilasnt-Sti~i~~ia~~~---~~p~~~ig~--hf~~P 146 (483)
T 3mog_A 81 A--L-----AAADLVIEAAS-ERLEVKKALFAQLAEVCPPQTLLTTNT-SSISITAIAAEI---KNPERVAGL--HFFNP 146 (483)
T ss_dssp G--G-----GGCSEEEECCC-CCHHHHHHHHHHHHHHSCTTCEEEECC-SSSCHHHHTTTS---SSGGGEEEE--EECSS
T ss_pred H--h-----cCCCEEEEcCC-CcHHHHHHHHHHHHHhhccCcEEEecC-CCCCHHHHHHHc---cCccceEEe--eecCh
Confidence 1 1 45688887543 222223567889999998887554322 222322221111 111112211 11222
Q ss_pred cc---CceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC
Q psy11646 174 FT---GVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG 243 (433)
Q Consensus 174 l~---gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG 243 (433)
.+ -+..+.+.-++.++.+.+...+..-+-..+.....| | +...+++.+.++=|..++..||
T Consensus 147 a~v~~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~---G------fi~Nr~l~~~~~Ea~~l~~~g~ 210 (483)
T 3mog_A 147 APVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTP---G------FIVNRVARPYYSEAWRALEEQV 210 (483)
T ss_dssp TTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCT---T------TTHHHHTHHHHHHHHHHHHTTC
T ss_pred hhhCCeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccC---c------chHHHHHHHHHHHHHHHHHhCC
Confidence 22 334566666777777666666655554455443223 4 4444444445555555555544
No 441
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=66.72 E-value=44 Score=32.22 Aligned_cols=97 Identities=11% Similarity=0.042 Sum_probs=58.4
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc---C--CCCeEEEEecccCCcccccccCcEeE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH---T--NPKLEFVVANIADQNLESIFLAKFNK 107 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~---~--~~~i~~~~~Di~~~~l~~~~~~~fD~ 107 (433)
.+.+||.|+.+-|.++.. ++.. .++.+.-|--.....+.++ + ..++++... .+. ++ +.||+
T Consensus 38 ~~~~~~~~~d~~gal~~~-~~~~------~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--~~----~~~~~ 103 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCA-LAEH------KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD--YP----QQPGV 103 (375)
T ss_dssp CCSCEEEECCSSSHHHHH-TGGG------CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC--CC----SSCSE
T ss_pred CCCCEEEECCCCCHHHHh-hccC------CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc--cc----cCCCE
Confidence 456899999999999844 3321 2344433444434444443 1 123444321 111 22 67999
Q ss_pred EEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC
Q psy11646 108 IFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF 144 (433)
Q Consensus 108 Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~ 144 (433)
|+.... -........+..+...|+||+.+++..-..
T Consensus 104 v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 104 VLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp EEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred EEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 988655 233455677889999999999998765433
No 442
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=66.64 E-value=4.2 Score=38.91 Aligned_cols=97 Identities=18% Similarity=0.224 Sum_probs=53.2
Q ss_pred HhcCCCCCCEEEEECCC--CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc----c
Q psy11646 27 DQFKWTDNESVLDVGCG--PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES----I 100 (433)
Q Consensus 27 ~~l~~~~~~~VLDIGcG--~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~----~ 100 (433)
+....+++.+||=.|++ .|..+.. +++.. ++.+|++++ ++...+.++ .+.. .++ | ....+.+ .
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~q-la~~~--g~~~V~~~~-~~~~~~~~~--~ga~--~~~--~-~~~~~~~~~~~~ 204 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQ-LCSTV--PNVTVFGTA-STFKHEAIK--DSVT--HLF--D-RNADYVQEVKRI 204 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHH-HHTTS--TTCEEEEEE-CGGGHHHHG--GGSS--EEE--E-TTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHH-HHHHc--CCcEEEEeC-CHHHHHHHH--cCCc--EEE--c-CCccHHHHHHHh
Confidence 44566789999999984 2344422 33332 235899988 656666665 2211 122 2 1111111 1
Q ss_pred ccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 101 FLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 101 ~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
..+.+|+|+-.-.-. .+....++|+++|++++..
T Consensus 205 ~~~g~Dvv~d~~g~~-------~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 205 SAEGVDIVLDCLCGD-------NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp CTTCEEEEEEECC--------------CTTEEEEEEEEEEC
T ss_pred cCCCceEEEECCCch-------hHHHHHHHhhcCCEEEEEC
Confidence 125799998754321 2356789999999998764
No 443
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=66.55 E-value=11 Score=31.91 Aligned_cols=54 Identities=13% Similarity=0.108 Sum_probs=29.7
Q ss_pred CCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC
Q psy11646 199 DEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN 254 (433)
Q Consensus 199 ~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~ 254 (433)
...+|+|+++...-..+.+.. .........++.-+.++|+|||.+++-+|.|..
T Consensus 87 ~~~fD~v~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 140 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSADKSV--ITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHD 140 (185)
T ss_dssp CSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred cCCcCEEEEeCCCCCCcchhc--ccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 457999998742211111111 011133345678888999999999999998754
No 444
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=65.90 E-value=4.4 Score=34.21 Aligned_cols=66 Identities=23% Similarity=0.314 Sum_probs=46.3
Q ss_pred CCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCHHHHHHHHhcc-cceeEEecCCCCc
Q psy11646 200 EKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNVVCLETKFQIF-FENVSIAKPKSSR 278 (433)
Q Consensus 200 ~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~~~~~~~l~~~-F~~v~~~KP~~sr 278 (433)
..+|+|++++.. +. ....+.-+.++|++||.+++-.+.......+...++.. | .+.+.+...++
T Consensus 99 ~~~D~v~~~~~~-----~~---------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~ 163 (192)
T 1l3i_A 99 PDIDIAVVGGSG-----GE---------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF-DVNITELNIAR 163 (192)
T ss_dssp CCEEEEEESCCT-----TC---------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC-CCEEEEEEEEE
T ss_pred CCCCEEEECCch-----HH---------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC-ceEEEEEEccc
Confidence 479999988642 11 24567778899999999999888777777777777654 7 66666544444
Q ss_pred cc
Q psy11646 279 NS 280 (433)
Q Consensus 279 ~~ 280 (433)
..
T Consensus 164 ~~ 165 (192)
T 1l3i_A 164 GR 165 (192)
T ss_dssp EE
T ss_pred Ce
Confidence 33
No 445
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=65.82 E-value=14 Score=36.78 Aligned_cols=85 Identities=20% Similarity=0.205 Sum_probs=49.7
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCc-----------hhHHHHHHHHHHHHHHHHHhccCCC
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHD-----------LDEHLQGLLLIGALNITTFLLKPGG 243 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~-----------~D~~~~~~L~~~al~ia~~~L~~gG 243 (433)
..+...++|..... ..+....+|+|++|.....+|... -+......+-...+.-+..+|+|||
T Consensus 310 ~~v~~~~~D~~~~~------~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG 383 (450)
T 2yxl_A 310 KIVKPLVKDARKAP------EIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGG 383 (450)
T ss_dssp CSEEEECSCTTCCS------SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred CcEEEEEcChhhcc------hhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45667777765432 113445799999996555554311 1111222333566778889999999
Q ss_pred eEEEEE---eecCCHHHHHHHHhcc
Q psy11646 244 TFVGKI---FRSRNVVCLETKFQIF 265 (433)
Q Consensus 244 ~fv~Ki---f~g~~~~~~~~~l~~~ 265 (433)
.++.-. ....+...+...++.+
T Consensus 384 ~lvy~tcs~~~~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 384 RLLYTTCSIFKEENEKNIRWFLNVH 408 (450)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred EEEEEeCCCChhhHHHHHHHHHHhC
Confidence 999544 3334444555555543
No 446
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=65.68 E-value=22 Score=29.08 Aligned_cols=100 Identities=7% Similarity=0.057 Sum_probs=57.5
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCC-HHHHHHHHhhcCCCCeEEEEecccCCccc-ccccCcEeEEEEc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVS-PNMIKHAKNHHTNPKLEFVVANIADQNLE-SIFLAKFNKIFSF 111 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS-~~~l~~A~~~~~~~~i~~~~~Di~~~~l~-~~~~~~fD~Vis~ 111 (433)
..+|+=+|+ |..+..++..+...+ .+|+++|.+ ++.++..++.. ..++.++.+|..+...- ...-...|.|++.
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g-~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRG-QNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCC-CCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 456887876 666644444333333 689999997 45444443322 13578889998653221 1113568888876
Q ss_pred ccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 112 YCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 112 ~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
-.-. .....+....+.+.|...++..
T Consensus 79 ~~~d---~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 79 SDND---ADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp SSCH---HHHHHHHHHHHHHTSSSCEEEE
T ss_pred cCCh---HHHHHHHHHHHHHCCCCEEEEE
Confidence 5422 2233445556666677776654
No 447
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=65.63 E-value=9.6 Score=34.38 Aligned_cols=57 Identities=11% Similarity=0.222 Sum_probs=34.0
Q ss_pred CceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEE
Q psy11646 176 GVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGK 248 (433)
Q Consensus 176 gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~K 248 (433)
.+.++++|..+. ...+........+|+|++|+.. ..+ ...+..+..+|+|||.+++-
T Consensus 113 ~i~~~~gda~~~--l~~~~~~~~~~~fD~V~~d~~~--------~~~------~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 113 KIKLRLGPALDT--LHSLLNEGGEHQFDFIFIDADK--------TNY------LNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp TEEEEESCHHHH--HHHHHHHHCSSCEEEEEEESCG--------GGH------HHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEcCHHHH--HHHHhhccCCCCEeEEEEcCCh--------HHh------HHHHHHHHHhcCCCeEEEEE
Confidence 456667764321 1122111124689999999751 111 12466677999999999873
No 448
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=65.58 E-value=12 Score=32.87 Aligned_cols=95 Identities=9% Similarity=0.047 Sum_probs=56.6
Q ss_pred EEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccc-ccccCcEeEEEEcccc
Q psy11646 36 SVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLE-SIFLAKFNKIFSFYCL 114 (433)
Q Consensus 36 ~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~-~~~~~~fD~Vis~~~l 114 (433)
+|+=+|+ |.++..++..+...+ ..|+++|.+++.++...+.. ++.++.+|..+...- ...-...|.|++...-
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g-~~v~vid~~~~~~~~l~~~~---~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRK-YGVVIINKDRELCEEFAKKL---KATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHHS---SSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred EEEEECC--CHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHc---CCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 4666775 666644444333333 68999999999888765542 567888998763221 1112567888875442
Q ss_pred cchhhHHHHHHHHHHhccCCCEEEE
Q psy11646 115 HWVQDQRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 115 ~~~~d~~~~l~~i~~~LkpGG~lll 139 (433)
. .....+..+.+.+.|...++.
T Consensus 76 d---~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 76 D---EVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp H---HHHHHHHHHHHHTSCCCEEEE
T ss_pred c---HHHHHHHHHHHHHcCCCeEEE
Confidence 2 122334455555556666554
No 449
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=65.22 E-value=7.6 Score=38.97 Aligned_cols=72 Identities=13% Similarity=0.164 Sum_probs=48.7
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCccc-ccccCcEeEEEEc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLE-SIFLAKFNKIFSF 111 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~-~~~~~~fD~Vis~ 111 (433)
.++|+=+||| ..+..++. .+...+..|+.+|.+++.++.+.+++ .+..+++|..+...- +..-+..|++++.
T Consensus 3 ~M~iiI~G~G--~vG~~la~-~L~~~~~~v~vId~d~~~~~~~~~~~---~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAE-NLVGENNDITIVDKDGDRLRELQDKY---DLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCS--HHHHHHHH-HTCSTTEEEEEEESCHHHHHHHHHHS---SCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECCC--HHHHHHHH-HHHHCCCCEEEEECCHHHHHHHHHhc---CcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 4577777775 45533333 33333478999999999999988775 577889998764322 2223668988874
No 450
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=65.02 E-value=12 Score=33.92 Aligned_cols=106 Identities=11% Similarity=0.145 Sum_probs=65.1
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-------cccCcE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-------IFLAKF 105 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-------~~~~~f 105 (433)
.+.++|=.|++.|- +..+...+...+ .+|+.++.+++.++...+.. ..++.++.+|+.+..--. ...+..
T Consensus 7 ~gk~~lVTGas~gI-G~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 7 QGKKAIVIGGTHGM-GLATVRRLVEGG-AEVLLTGRNESNIARIREEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTCEEEEETCSSHH-HHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCEEEEECCCCHH-HHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46788888876653 324444333344 79999999998887766554 246888999987642110 012578
Q ss_pred eEEEEcccccch--------hhHH-----------HHHHHHHHhccCCCEEEEEe
Q psy11646 106 NKIFSFYCLHWV--------QDQR-----------QAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 106 D~Vis~~~l~~~--------~d~~-----------~~l~~i~~~LkpGG~lll~~ 141 (433)
|+++.+...... ++++ ...+.+...++.+|.++...
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999987654321 1111 23445556667788877653
No 451
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=64.91 E-value=18 Score=31.89 Aligned_cols=76 Identities=21% Similarity=0.182 Sum_probs=50.6
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCe-EEEEecccCCcccccccCcEeEEEEc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKL-EFVVANIADQNLESIFLAKFNKIFSF 111 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i-~~~~~Di~~~~l~~~~~~~fD~Vis~ 111 (433)
.+++||=.|+ +|..+..++..+...+ .+|++++.++..++.... .++ +++.+|+. ..+.... +..|.|+.+
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G-~~V~~~~R~~~~~~~~~~----~~~~~~~~~Dl~-~~~~~~~-~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKG-HEPVAMVRNEEQGPELRE----RGASDIVVANLE-EDFSHAF-ASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHH----TTCSEEEECCTT-SCCGGGG-TTCSEEEEC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCC-CeEEEEECChHHHHHHHh----CCCceEEEcccH-HHHHHHH-cCCCEEEEC
Confidence 4778998875 4555545555444444 799999999887665543 367 89999997 3333322 468999987
Q ss_pred ccccc
Q psy11646 112 YCLHW 116 (433)
Q Consensus 112 ~~l~~ 116 (433)
.....
T Consensus 92 ag~~~ 96 (236)
T 3e8x_A 92 AGSGP 96 (236)
T ss_dssp CCCCT
T ss_pred CCCCC
Confidence 76543
No 452
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=64.45 E-value=37 Score=28.26 Aligned_cols=88 Identities=19% Similarity=0.044 Sum_probs=54.5
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecC-
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSR- 253 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~- 253 (433)
+++...++|+.... +....+|+|++.+. +.. .. ...-....+.-+..+|++||.+++......
T Consensus 89 ~~~~~~~~d~~~~~--------~~~~~~D~i~~~~~--~~~--~~----~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~ 152 (195)
T 3cgg_A 89 PEARWVVGDLSVDQ--------ISETDFDLIVSAGN--VMG--FL----AEDGREPALANIHRALGADGRAVIGFGAGRG 152 (195)
T ss_dssp TTSEEEECCTTTSC--------CCCCCEEEEEECCC--CGG--GS----CHHHHHHHHHHHHHHEEEEEEEEEEEETTSS
T ss_pred CCCcEEEcccccCC--------CCCCceeEEEECCc--HHh--hc----ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCC
Confidence 35667777765432 33567999998631 111 11 112235567777899999999999877664
Q ss_pred -CHHHHHHHHhc-ccceeEEecCCCCc
Q psy11646 254 -NVVCLETKFQI-FFENVSIAKPKSSR 278 (433)
Q Consensus 254 -~~~~~~~~l~~-~F~~v~~~KP~~sr 278 (433)
....+...++. -|+.+.+......+
T Consensus 153 ~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 179 (195)
T 3cgg_A 153 WVFGDFLEVAERVGLELENAFESWDLK 179 (195)
T ss_dssp CCHHHHHHHHHHHTEEEEEEESSTTCC
T ss_pred cCHHHHHHHHHHcCCEEeeeecccccC
Confidence 45666666644 48877776654333
No 453
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=64.21 E-value=15 Score=35.21 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=44.7
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEcc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFY 112 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~ 112 (433)
..++||=+|| |..+..+ +..+... ..++..|.+...++.+++. +..+..|+.+..--...-...|+|++..
T Consensus 15 ~~mkilvlGa--G~vG~~~-~~~L~~~-~~v~~~~~~~~~~~~~~~~-----~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAI-AWDLKDE-FDVYIGDVNNENLEKVKEF-----ATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp -CCEEEEECC--SHHHHHH-HHHHTTT-SEEEEEESCHHHHHHHTTT-----SEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CccEEEEECC--CHHHHHH-HHHHhcC-CCeEEEEcCHHHHHHHhcc-----CCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 3568999998 5555222 2222233 5899999999988877653 4556678765321111225689999865
Q ss_pred c
Q psy11646 113 C 113 (433)
Q Consensus 113 ~ 113 (433)
.
T Consensus 86 p 86 (365)
T 3abi_A 86 P 86 (365)
T ss_dssp C
T ss_pred C
Confidence 4
No 454
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=64.08 E-value=13 Score=35.86 Aligned_cols=96 Identities=13% Similarity=0.153 Sum_probs=55.8
Q ss_pred CCCCCEEEEECC-C-CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccc-c-ccCcEe
Q psy11646 31 WTDNESVLDVGC-G-PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLES-I-FLAKFN 106 (433)
Q Consensus 31 ~~~~~~VLDIGc-G-~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~-~-~~~~fD 106 (433)
.+++.+||=.|+ | .|..+..+++ . .+ .+|++++ +++.++.+++. +.. .. .|..+..+.+ . ....+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~-~--~G-a~Vi~~~-~~~~~~~~~~l-Ga~--~v--~~~~~~~~~~~~~~~~g~D 250 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMK-A--WD-AHVTAVC-SQDASELVRKL-GAD--DV--IDYKSGSVEEQLKSLKPFD 250 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHH-H--TT-CEEEEEE-CGGGHHHHHHT-TCS--EE--EETTSSCHHHHHHTSCCBS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHH-h--CC-CEEEEEe-ChHHHHHHHHc-CCC--EE--EECCchHHHHHHhhcCCCC
Confidence 578999999994 3 3444433333 2 23 5899998 77777777653 211 11 2332221111 0 114689
Q ss_pred EEEEcccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 107 KIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 107 ~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
+|+-+-.-. ...+....+.|++||+++...
T Consensus 251 ~vid~~g~~-----~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 251 FILDNVGGS-----TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEEESSCTT-----HHHHGGGGBCSSSCCEEEESC
T ss_pred EEEECCCCh-----hhhhHHHHHhhcCCcEEEEeC
Confidence 998755422 134566678899999987753
No 455
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=63.83 E-value=4.7 Score=37.25 Aligned_cols=109 Identities=8% Similarity=0.060 Sum_probs=77.4
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-C----CCCeEEE--EecccC
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-T----NPKLEFV--VANIAD 94 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~----~~~i~~~--~~Di~~ 94 (433)
+.++.+....+++.+|||||||+|.++ ..+++. + +|+|+|+++ |+..+++.. . ..++.++ ++|+..
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s-~~la~~---~--~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~ 135 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWS-YYAASR---P--HVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHT 135 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHH-HHHHTS---T--TEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTT
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHH-HHHHHc---C--cEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhH
Confidence 445555544568899999999999999 555543 3 899999998 643333221 0 0168888 889887
Q ss_pred CcccccccCcEeEEEEcccccchh----hHH---HHHHHHHHhccCCC--EEEEEecc
Q psy11646 95 QNLESIFLAKFNKIFSFYCLHWVQ----DQR---QAISNIYNLLMPGG--EVLLLLNA 143 (433)
Q Consensus 95 ~~l~~~~~~~fD~Vis~~~l~~~~----d~~---~~l~~i~~~LkpGG--~lll~~~~ 143 (433)
.+ + ++||+|+|..+ ++.. +.. .++..+.++|+||| .+++....
T Consensus 136 l~--~---~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 136 LP--V---ERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp SC--C---CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CC--C---CCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 43 3 78999999876 4322 111 37899999999999 88887655
No 456
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=63.16 E-value=15 Score=33.29 Aligned_cols=80 Identities=11% Similarity=0.164 Sum_probs=48.8
Q ss_pred CCCEEEEECC-CCChhHHHHhcccCCCCCcEEEEEeCCHHH-HHHHHhhcCCCCeEEEEecccCCcc-cccc------cC
Q psy11646 33 DNESVLDVGC-GPGNVTSKLLLPNLPKSVVKLVGLDVSPNM-IKHAKNHHTNPKLEFVVANIADQNL-ESIF------LA 103 (433)
Q Consensus 33 ~~~~VLDIGc-G~G~~~~~~l~~~~~~~~~~v~gvDiS~~~-l~~A~~~~~~~~i~~~~~Di~~~~l-~~~~------~~ 103 (433)
.+.++|=.|+ |+|..+..+...+...+ .+|+.++.++.. ++...+.. ..++.++.+|+.+..- .... .+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQG-AQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG 83 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTT-CEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCC-CEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678898898 36656644444333344 689999988754 34444433 2357788899876421 1111 13
Q ss_pred ---cEeEEEEcccc
Q psy11646 104 ---KFNKIFSFYCL 114 (433)
Q Consensus 104 ---~fD~Vis~~~l 114 (433)
..|+++.+...
T Consensus 84 ~~~~iD~lv~nAg~ 97 (269)
T 2h7i_A 84 AGNKLDGVVHSIGF 97 (269)
T ss_dssp TTCCEEEEEECCCC
T ss_pred CCCCceEEEECCcc
Confidence 79999987654
No 457
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=62.63 E-value=5 Score=37.34 Aligned_cols=109 Identities=9% Similarity=0.069 Sum_probs=77.9
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC-----CCCeEEE--EecccC
Q psy11646 22 LSQYIDQFKWTDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT-----NPKLEFV--VANIAD 94 (433)
Q Consensus 22 l~~l~~~l~~~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~-----~~~i~~~--~~Di~~ 94 (433)
+.++.+....+++.+|||+|||+|.++ ..+++. + +|+|+|+|+ |+..++++.. ..++.+. ++|+..
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcGtG~~s-~~la~~---~--~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~ 143 (276)
T 2wa2_A 71 LAWIDERGGVELKGTVVDLGCGRGSWS-YYAASQ---P--NVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTK 143 (276)
T ss_dssp HHHHHHTTSCCCCEEEEEESCTTCHHH-HHHHTS---T--TEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG
T ss_pred HHHHHHcCCCCCCCEEEEeccCCCHHH-HHHHHc---C--CEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhh
Confidence 455666544568899999999999999 455543 3 899999998 6544433210 0168888 889887
Q ss_pred CcccccccCcEeEEEEcccccchh----hHH---HHHHHHHHhccCCC--EEEEEecc
Q psy11646 95 QNLESIFLAKFNKIFSFYCLHWVQ----DQR---QAISNIYNLLMPGG--EVLLLLNA 143 (433)
Q Consensus 95 ~~l~~~~~~~fD~Vis~~~l~~~~----d~~---~~l~~i~~~LkpGG--~lll~~~~ 143 (433)
.+ + ++||+|+|..+ ++.. +.. .++..+.++||||| .+++....
T Consensus 144 l~--~---~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 144 ME--P---FQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CC--C---CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CC--C---CCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 43 2 78999999876 4321 111 37899999999999 88886655
No 458
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=62.35 E-value=7.7 Score=35.13 Aligned_cols=82 Identities=9% Similarity=0.052 Sum_probs=49.1
Q ss_pred CCCCEEEEECCC-CChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcc-ccc------cc
Q psy11646 32 TDNESVLDVGCG-PGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNL-ESI------FL 102 (433)
Q Consensus 32 ~~~~~VLDIGcG-~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l-~~~------~~ 102 (433)
.++.+||=.|++ +|..+..++..+...+ .+|+.++.+....+.+++.. ...++.++.+|+.+..- ... ..
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREG-AELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcC-CCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 357889999975 2444434444333344 68999988865444443332 12457889999976421 111 12
Q ss_pred CcEeEEEEcccc
Q psy11646 103 AKFNKIFSFYCL 114 (433)
Q Consensus 103 ~~fD~Vis~~~l 114 (433)
+..|+++.+...
T Consensus 91 g~id~lv~nAg~ 102 (271)
T 3ek2_A 91 DSLDGLVHSIGF 102 (271)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 578999987654
No 459
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=62.30 E-value=3.6 Score=39.81 Aligned_cols=100 Identities=11% Similarity=0.132 Sum_probs=54.0
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEccc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFYC 113 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~ 113 (433)
+.+|+=+|+| ..+..++..+...+ .+|+++|.+++.++.+++... ..+.....+.. .+.+. -..+|+|+..-.
T Consensus 167 ~~~VlViGaG--gvG~~aa~~a~~~G-a~V~v~dr~~~r~~~~~~~~~-~~~~~~~~~~~--~~~~~-~~~~DvVI~~~~ 239 (361)
T 1pjc_A 167 PGKVVILGGG--VVGTEAAKMAVGLG-AQVQIFDINVERLSYLETLFG-SRVELLYSNSA--EIETA-VAEADLLIGAVL 239 (361)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHG-GGSEEEECCHH--HHHHH-HHTCSEEEECCC
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhhC-ceeEeeeCCHH--HHHHH-HcCCCEEEECCC
Confidence 4799999985 34322222222233 489999999998888876541 12222211111 11111 135899987654
Q ss_pred ccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 114 LHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 114 l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
......+.-..+...+.++|||.++..
T Consensus 240 ~~~~~~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 240 VPGRRAPILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEET
T ss_pred cCCCCCCeecCHHHHhhCCCCCEEEEE
Confidence 422111111133456788999987764
No 460
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=61.79 E-value=16 Score=37.04 Aligned_cols=90 Identities=8% Similarity=0.004 Sum_probs=54.3
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEc
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSF 111 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~ 111 (433)
.+|.+|+=+|+|. .+..++..+...+ .+|+++|.++..++.|++. +.++ .++.+. -...|+|+..
T Consensus 272 l~GktV~IiG~G~--IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~----Ga~~--~~l~e~------l~~aDvVi~a 336 (494)
T 3ce6_A 272 IGGKKVLICGYGD--VGKGCAEAMKGQG-ARVSVTEIDPINALQAMME----GFDV--VTVEEA------IGDADIVVTA 336 (494)
T ss_dssp CTTCEEEEECCSH--HHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT----TCEE--CCHHHH------GGGCSEEEEC
T ss_pred CCcCEEEEEccCH--HHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc----CCEE--ecHHHH------HhCCCEEEEC
Confidence 5789999999864 4322222221223 5999999999888777653 2332 232211 1457999986
Q ss_pred ccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 112 YCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 112 ~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
-.-.++-+ .+..+.+|+||+++...
T Consensus 337 tgt~~~i~-----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 337 TGNKDIIM-----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp SSSSCSBC-----HHHHHHSCTTCEEEECS
T ss_pred CCCHHHHH-----HHHHHhcCCCcEEEEeC
Confidence 43322211 24567799999887654
No 461
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=61.25 E-value=35 Score=30.11 Aligned_cols=97 Identities=10% Similarity=-0.062 Sum_probs=58.7
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc-cccccCcEeEEEEc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL-ESIFLAKFNKIFSF 111 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l-~~~~~~~fD~Vis~ 111 (433)
...+|+=+|+ |..+..++..+...+ . |+++|.+++.++.++ .++.++.+|..+... ....-...|.|++.
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g-~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSE-V-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSE-E-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCC-e-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 3568998887 566644444443344 6 999999999887766 257888999875321 11112568888875
Q ss_pred ccccchhhHHHHHHHHHHhccCCCEEEEEe
Q psy11646 112 YCLHWVQDQRQAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 112 ~~l~~~~d~~~~l~~i~~~LkpGG~lll~~ 141 (433)
..-. ..........+.+.|+..++...
T Consensus 79 ~~~d---~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 79 LESD---SETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp CSCH---HHHHHHHHHHHHHCSSSEEEEEC
T ss_pred CCCc---HHHHHHHHHHHHHCCCCeEEEEE
Confidence 4321 12233445566677776766543
No 462
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=61.16 E-value=7.7 Score=36.21 Aligned_cols=43 Identities=21% Similarity=0.310 Sum_probs=30.7
Q ss_pred CcEeEEEEccc----ccc-h--hhH----HHHHHHHHHhccCCCEEEEEeccCC
Q psy11646 103 AKFNKIFSFYC----LHW-V--QDQ----RQAISNIYNLLMPGGEVLLLLNAFN 145 (433)
Q Consensus 103 ~~fD~Vis~~~----l~~-~--~d~----~~~l~~i~~~LkpGG~lll~~~~~~ 145 (433)
+++|+|++... -|| - .|. .-+++...++|+|||.+++-..+..
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 67999999543 344 2 232 2357788899999999999776655
No 463
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=61.06 E-value=1.1e+02 Score=28.81 Aligned_cols=187 Identities=13% Similarity=0.084 Sum_probs=104.6
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC--------CC-------------CeEEEEec
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT--------NP-------------KLEFVVAN 91 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~--------~~-------------~i~~~~~D 91 (433)
...+|-=||+|+-..++..... ..+..|+..|++++.++.+.++.. .. ++++ ..|
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a---~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFA---SGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHH---HTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCeEEEECCcHHHHHHHHHHH---hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 3568999999875444222221 223799999999999887765430 00 1111 111
Q ss_pred ccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCcccccccee-ee
Q psy11646 92 IADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRT-YR 170 (433)
Q Consensus 92 i~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~-~~ 170 (433)
+.+ .-...|+|+-. +.+.++-...+++++-++++|+..+.-.+. .-++..+...... =.++..-+. .+
T Consensus 81 l~~------a~~~ad~ViEa-v~E~l~iK~~lf~~l~~~~~~~aIlaSNTS-sl~is~ia~~~~~---p~r~ig~HffNP 149 (319)
T 3ado_A 81 LAE------AVEGVVHIQEC-VPENLDLKRKIFAQLDSIVDDRVVLSSSSS-CLLPSKLFTGLAH---VKQCIVAHPVNP 149 (319)
T ss_dssp HHH------HTTTEEEEEEC-CCSCHHHHHHHHHHHHTTCCSSSEEEECCS-SCCHHHHHTTCTT---GGGEEEEEECSS
T ss_pred hHh------HhccCcEEeec-cccHHHHHHHHHHHHHHHhhhcceeehhhh-hccchhhhhhccC---CCcEEEecCCCC
Confidence 111 11456777643 334444467889999999999875443222 2233333222211 111111111 01
Q ss_pred eccccCceEEEccccccchHHHHHHhcCCCCCe-EEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC
Q psy11646 171 CLLFTGVIQVQGDITKESTIKEIFSHFDDEKVD-LVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG 243 (433)
Q Consensus 171 m~pl~gv~~iqgDi~~~~t~~~il~~~~~~~~d-lVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG 243 (433)
..-++-++.+.+..|++++..........-+-. +++. ++...+...+|..+-++=|.+++..|+
T Consensus 150 ~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~---------kd~pGFi~NRl~~~~~~EA~~lv~eGv 214 (319)
T 3ado_A 150 PYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVL---------KEIDGFVLNRLQYAIISEAWRLVEEGI 214 (319)
T ss_dssp TTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECS---------SCCTTTTHHHHHHHHHHHHHHHHHTTS
T ss_pred ccccchHHhcCCCCCcHHHHHHHHHHHHHhCCccCCcC---------CCCCCEeHHHHHHHHHHHHHHHHHhCC
Confidence 122346788889999998888877776554322 2232 333456777888888888888888776
No 464
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=60.82 E-value=17 Score=31.92 Aligned_cols=92 Identities=12% Similarity=-0.054 Sum_probs=50.6
Q ss_pred CceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHH--------HHHHHHHHHHHHHHhccCCCeEEE
Q psy11646 176 GVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHL--------QGLLLIGALNITTFLLKPGGTFVG 247 (433)
Q Consensus 176 gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~--------~~~L~~~al~ia~~~L~~gG~fv~ 247 (433)
.+.++++|..... .+....+|+|+++......+.....+.. ...+....+..+.++|+|||.+++
T Consensus 105 ~v~~~~~d~~~~~-------~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 105 NVRLVKSNGGIIK-------GVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp CCEEEECSSCSST-------TTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CcEEEeCCchhhh-------hcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 4667777754221 1224689999988543222221111110 112236678888999999999998
Q ss_pred EEeecC-CHHHHHHHHhcccceeEEecC
Q psy11646 248 KIFRSR-NVVCLETKFQIFFENVSIAKP 274 (433)
Q Consensus 248 Kif~g~-~~~~~~~~l~~~F~~v~~~KP 274 (433)
-+-.+. ....+...++...-.+...+.
T Consensus 178 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 178 YLPDKEKLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp EEESCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EecccHhHHHHHHHHHHHcCCceEEEEe
Confidence 765543 345666666554335555544
No 465
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=60.44 E-value=12 Score=37.06 Aligned_cols=84 Identities=15% Similarity=0.207 Sum_probs=55.5
Q ss_pred ccCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEE----
Q psy11646 174 FTGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKI---- 249 (433)
Q Consensus 174 l~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Ki---- 249 (433)
.+++.++++|..+......+.... ..||+|++|++- .... ...++.-...+|+|||.|++.-
T Consensus 263 ~~rI~fv~GDa~dlpf~~~l~~~d--~sFDlVisdgsH------~~~d------~~~aL~el~rvLKPGGvlVi~Dl~ts 328 (419)
T 3sso_A 263 ELRIRTIQGDQNDAEFLDRIARRY--GPFDIVIDDGSH------INAH------VRTSFAALFPHVRPGGLYVIEDMWTA 328 (419)
T ss_dssp BTTEEEEECCTTCHHHHHHHHHHH--CCEEEEEECSCC------CHHH------HHHHHHHHGGGEEEEEEEEEECGGGG
T ss_pred CCCcEEEEecccccchhhhhhccc--CCccEEEECCcc------cchh------HHHHHHHHHHhcCCCeEEEEEecccc
Confidence 357888999988765554444332 479999998742 2221 2457888889999999999963
Q ss_pred ----eecCC-----HHHHHHHHhcccceeEE
Q psy11646 250 ----FRSRN-----VVCLETKFQIFFENVSI 271 (433)
Q Consensus 250 ----f~g~~-----~~~~~~~l~~~F~~v~~ 271 (433)
|.|.. ...++..++.++..+..
T Consensus 329 y~p~f~G~~~~~~~~~tii~~lk~l~D~l~~ 359 (419)
T 3sso_A 329 YWPGFGGQADPQECSGTSLGLLKSLIDAIQH 359 (419)
T ss_dssp GCTBTTCCSSTTCCTTSHHHHHHHHHHHHTG
T ss_pred cCcccCCCccCCcchhHHHHHHHHHHHHhcc
Confidence 44432 24566666666666543
No 466
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=59.95 E-value=21 Score=28.28 Aligned_cols=97 Identities=12% Similarity=0.153 Sum_probs=52.2
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc-ccccccCcEeEEEEcc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN-LESIFLAKFNKIFSFY 112 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~-l~~~~~~~fD~Vis~~ 112 (433)
+.+|+=+|+ |..+..++..+...+ .+++++|.++..++.+++. ...+..+|..+.. +.......+|+|+..-
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g-~~v~~~d~~~~~~~~~~~~----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 78 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMG-HEVLAVDINEEKVNAYASY----ATHAVIANATEENELLSLGIRNFEYVIVAI 78 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTT-CCCEEEESCHHHHHTTTTT----CSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHh----CCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence 457999997 555534433332233 5899999998766544332 3456667765421 1111125689998765
Q ss_pred cccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 113 CLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 113 ~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
.-.. +....+....+.+.+. .++..
T Consensus 79 ~~~~--~~~~~~~~~~~~~~~~-~ii~~ 103 (144)
T 2hmt_A 79 GANI--QASTLTTLLLKELDIP-NIWVK 103 (144)
T ss_dssp CSCH--HHHHHHHHHHHHTTCS-EEEEE
T ss_pred CCch--HHHHHHHHHHHHcCCC-eEEEE
Confidence 5321 1122333444455664 55543
No 467
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=59.80 E-value=28 Score=31.71 Aligned_cols=61 Identities=15% Similarity=0.119 Sum_probs=39.9
Q ss_pred ccCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecC
Q psy11646 174 FTGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSR 253 (433)
Q Consensus 174 l~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~ 253 (433)
.+++.+.+++..+. .+....+|+|++..+- |-.|. ..++.-+.++|+|||.|++-.+.-.
T Consensus 80 ~~~v~~~~~~~e~~--------~~~~~sfD~v~~~~~~-----h~~~~-------~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 80 HPRVTYAVAPAEDT--------GLPPASVDVAIAAQAM-----HWFDL-------DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CTTEEEEECCTTCC--------CCCSSCEEEEEECSCC-----TTCCH-------HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cCCceeehhhhhhh--------cccCCcccEEEEeeeh-----hHhhH-------HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 45677777775442 2456789999986543 33332 1355667789999999988666543
Q ss_pred C
Q psy11646 254 N 254 (433)
Q Consensus 254 ~ 254 (433)
.
T Consensus 140 ~ 140 (257)
T 4hg2_A 140 R 140 (257)
T ss_dssp B
T ss_pred C
Confidence 3
No 468
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=59.74 E-value=26 Score=32.78 Aligned_cols=80 Identities=14% Similarity=0.114 Sum_probs=52.6
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----CCCCeEEEEecccCCcc-ccc------c
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----TNPKLEFVVANIADQNL-ESI------F 101 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----~~~~i~~~~~Di~~~~l-~~~------~ 101 (433)
.+.+||=.|++.|--. .++..+...+ .+|++++.++..++.+.+.+ ...++.++.+|+.+..- ... .
T Consensus 7 ~~k~vlVTGas~gIG~-~la~~l~~~G-~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGI-GLVRQLLNQG-CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHH-HHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHH-HHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4678998888766433 4444444444 68999999998877766544 12378899999976421 111 1
Q ss_pred cCcEeEEEEcccc
Q psy11646 102 LAKFNKIFSFYCL 114 (433)
Q Consensus 102 ~~~fD~Vis~~~l 114 (433)
.+..|+++.+...
T Consensus 85 ~g~id~lv~nAg~ 97 (319)
T 3ioy_A 85 FGPVSILCNNAGV 97 (319)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 2578999987654
No 469
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=59.60 E-value=58 Score=30.02 Aligned_cols=105 Identities=14% Similarity=0.067 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhcCCC-CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCc
Q psy11646 18 AAKLLSQYIDQFKWT-DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQN 96 (433)
Q Consensus 18 ~~~ll~~l~~~l~~~-~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~ 96 (433)
++..+..++...... .+.+|+=||+|. .+..++..+...+ .+|++.|.++...+.+++. ++... +..+
T Consensus 138 ae~a~~~~l~~~~~~l~g~~v~IiG~G~--iG~~~a~~l~~~G-~~V~~~dr~~~~~~~~~~~----g~~~~--~~~~-- 206 (293)
T 3d4o_A 138 AEGTIMMAIQHTDFTIHGANVAVLGLGR--VGMSVARKFAALG-AKVKVGARESDLLARIAEM----GMEPF--HISK-- 206 (293)
T ss_dssp HHHHHHHHHHHCSSCSTTCEEEEECCSH--HHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT----TSEEE--EGGG--
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEeeCH--HHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHC----CCeec--Chhh--
Confidence 334444444443322 688999999764 4423332222233 5999999998776655432 23322 1111
Q ss_pred ccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
+.+ .-...|+|+..-..+.+.. +..+.++||+.++-+
T Consensus 207 l~~-~l~~aDvVi~~~p~~~i~~------~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 207 AAQ-ELRDVDVCINTIPALVVTA------NVLAEMPSHTFVIDL 243 (293)
T ss_dssp HHH-HTTTCSEEEECCSSCCBCH------HHHHHSCTTCEEEEC
T ss_pred HHH-HhcCCCEEEECCChHHhCH------HHHHhcCCCCEEEEe
Confidence 111 1256899998877654432 234578999877654
No 470
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=59.52 E-value=13 Score=35.38 Aligned_cols=89 Identities=9% Similarity=0.130 Sum_probs=56.5
Q ss_pred CceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCH
Q psy11646 176 GVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNV 255 (433)
Q Consensus 176 gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~ 255 (433)
.+.++++|..+.. ..+|+|++|..+. +. ..+..+..+|++||.+++-.+... .
T Consensus 244 ~v~~~~~D~~~~~-----------~~fD~Vi~dpP~~--~~-------------~~l~~~~~~L~~gG~l~~~~~~~~-~ 296 (336)
T 2yx1_A 244 KIIPILSDVREVD-----------VKGNRVIMNLPKF--AH-------------KFIDKALDIVEEGGVIHYYTIGKD-F 296 (336)
T ss_dssp TEEEEESCGGGCC-----------CCEEEEEECCTTT--GG-------------GGHHHHHHHEEEEEEEEEEEEESS-S
T ss_pred cEEEEECChHHhc-----------CCCcEEEECCcHh--HH-------------HHHHHHHHHcCCCCEEEEEEeecC-c
Confidence 5678888876542 5799999985332 11 445667788999999999888777 6
Q ss_pred HHHHHHHhcccceeEEecCCCCcccccceeEEEeecc
Q psy11646 256 VCLETKFQIFFENVSIAKPKSSRNSSIESFIVCQNYR 292 (433)
Q Consensus 256 ~~~~~~l~~~F~~v~~~KP~~sr~~s~E~~~v~~~~~ 292 (433)
..+...++..+ .+.+.+-...|.-+...+.+|..++
T Consensus 297 ~~~~~~l~~~~-~~~i~~~~~v~~~~p~~~~~~~~~~ 332 (336)
T 2yx1_A 297 DKAIKLFEKKC-DCEVLEKRIVKSYAPREYILALDFK 332 (336)
T ss_dssp HHHHHHHHHHS-EEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred hHHHHHHHHhc-CCcEEEEEEEeccCCCCCEEEEEEE
Confidence 66666666554 3333333333444444566665554
No 471
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=59.36 E-value=21 Score=34.90 Aligned_cols=73 Identities=10% Similarity=-0.079 Sum_probs=44.7
Q ss_pred HHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEee-cCCHHHHHHHHhccc
Q psy11646 191 KEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFR-SRNVVCLETKFQIFF 266 (433)
Q Consensus 191 ~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~-g~~~~~~~~~l~~~F 266 (433)
.+....+.+. +|+|++|. ........+...........+..+..+|+|||.++.-... ..+.+.+...+...+
T Consensus 271 ~~~l~~~~~~-fD~Ii~dp--P~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~ 344 (393)
T 4dmg_A 271 LPTLRGLEGP-FHHVLLDP--PTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAA 344 (393)
T ss_dssp HHHHHTCCCC-EEEEEECC--CCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-CCEEEECC--CcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 3344444555 99999994 3322233344444455566778888999999999844443 444566666665444
No 472
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=58.92 E-value=30 Score=29.48 Aligned_cols=127 Identities=17% Similarity=0.086 Sum_probs=64.0
Q ss_pred chhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeee---------eccccCceEEEccccc
Q psy11646 116 WVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYR---------CLLFTGVIQVQGDITK 186 (433)
Q Consensus 116 ~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~---------m~pl~gv~~iqgDi~~ 186 (433)
|..+...+...+.+.++++..++-...+........... + ...+......+ ....+.+...++|...
T Consensus 25 ~~~~~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~---~-~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~ 100 (215)
T 2pxx_A 25 WFGDFSSFRALLEPELRPEDRILVLGCGNSALSYELFLG---G-FPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK 100 (215)
T ss_dssp TTCCHHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHT---T-CCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS
T ss_pred cccCHHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHc---C-CCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc
Confidence 444555566677777888887766544433322221111 1 11111100000 0112456777777655
Q ss_pred cchHHHHHHhcCCCCCeEEEecCCCCC----CCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC
Q psy11646 187 ESTIKEIFSHFDDEKVDLVVFDGAPDV----TGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN 254 (433)
Q Consensus 187 ~~t~~~il~~~~~~~~dlVvsD~ap~~----tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~ 254 (433)
. .+....+|+|++.+.-.. .+.+-........-....+.-+.++|+|||.+++-.+....
T Consensus 101 ~--------~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~ 164 (215)
T 2pxx_A 101 L--------DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH 164 (215)
T ss_dssp C--------CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH
T ss_pred C--------CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH
Confidence 3 134567899987653210 00000000112233456777788999999999987776543
No 473
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=58.77 E-value=12 Score=36.50 Aligned_cols=75 Identities=16% Similarity=0.165 Sum_probs=46.7
Q ss_pred CCCCeEEEecCCCC-CCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEE---eecCCHHHHHHHHhcccceeEEecC
Q psy11646 199 DEKVDLVVFDGAPD-VTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKI---FRSRNVVCLETKFQIFFENVSIAKP 274 (433)
Q Consensus 199 ~~~~dlVvsD~ap~-~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Ki---f~g~~~~~~~~~l~~~F~~v~~~KP 274 (433)
...+|+|+.|.... .++... ......-....++.+.+.|++||.|+... +.-.....+.+.++..|..|...+.
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~--g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v~~~~~ 359 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPE--EDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKE 359 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEE
T ss_pred cCceeEEEECCCCCcccCccc--CcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcceEeeE
Confidence 45799999997532 121111 11112223456788899999999998742 1112246778889999999877654
Q ss_pred C
Q psy11646 275 K 275 (433)
Q Consensus 275 ~ 275 (433)
.
T Consensus 360 ~ 360 (381)
T 3c6k_A 360 I 360 (381)
T ss_dssp E
T ss_pred E
Confidence 3
No 474
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=58.52 E-value=18 Score=32.51 Aligned_cols=80 Identities=10% Similarity=0.096 Sum_probs=48.5
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeC-CHHHHHHHHhhc--CCCCeEEEEecccCCc-ccccc------c
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDV-SPNMIKHAKNHH--TNPKLEFVVANIADQN-LESIF------L 102 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDi-S~~~l~~A~~~~--~~~~i~~~~~Di~~~~-l~~~~------~ 102 (433)
.+.+||=.|+ +|..+..++..+...+ .+|++++. ++..++...+.. ...++.++.+|+.+.. +.... .
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRG-ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCC-CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567887765 4555545544444444 68999998 776665544333 2356888999987632 11111 1
Q ss_pred CcEeEEEEcccc
Q psy11646 103 AKFNKIFSFYCL 114 (433)
Q Consensus 103 ~~fD~Vis~~~l 114 (433)
+..|+|+.+...
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 478999876643
No 475
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=58.37 E-value=34 Score=32.08 Aligned_cols=68 Identities=21% Similarity=0.181 Sum_probs=41.8
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCch-----------hHHHHHHHHHHHHHHHHHhccCCC
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDL-----------DEHLQGLLLIGALNITTFLLKPGG 243 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~-----------D~~~~~~L~~~al~ia~~~L~~gG 243 (433)
.++..+++|...... ....+|+|++|......|.... +......+-...+.-+..+|+|||
T Consensus 169 ~~v~~~~~D~~~~~~--------~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG 240 (315)
T 1ixk_A 169 LNVILFHSSSLHIGE--------LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGG 240 (315)
T ss_dssp CSEEEESSCGGGGGG--------GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred CeEEEEECChhhccc--------ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 356677777654321 1347999999965544443211 111123444567778889999999
Q ss_pred eEEEEEe
Q psy11646 244 TFVGKIF 250 (433)
Q Consensus 244 ~fv~Kif 250 (433)
.++.-..
T Consensus 241 ~lv~stc 247 (315)
T 1ixk_A 241 ILVYSTC 247 (315)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9987543
No 476
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=58.23 E-value=70 Score=26.99 Aligned_cols=99 Identities=15% Similarity=0.078 Sum_probs=60.3
Q ss_pred ccCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecC
Q psy11646 174 FTGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSR 253 (433)
Q Consensus 174 l~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~ 253 (433)
.+++.+.++|+.+.. +....+|+|++...-.-....+ ....+.-...+|+|||.+++-.+.+.
T Consensus 83 ~~~~~~~~~d~~~~~--------~~~~~fD~v~~~~~l~~~~~~~---------~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 83 HPSVTFHHGTITDLS--------DSPKRWAGLLAWYSLIHMGPGE---------LPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp CTTSEEECCCGGGGG--------GSCCCEEEEEEESSSTTCCTTT---------HHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred CCCCeEEeCcccccc--------cCCCCeEEEEehhhHhcCCHHH---------HHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 346677777765421 4457899999976432221111 34566777899999999999887664
Q ss_pred C---------------HHHHHHHHhc-ccceeEEecCCCCcccccceeEEEeeccC
Q psy11646 254 N---------------VVCLETKFQI-FFENVSIAKPKSSRNSSIESFIVCQNYRP 293 (433)
Q Consensus 254 ~---------------~~~~~~~l~~-~F~~v~~~KP~~sr~~s~E~~~v~~~~~~ 293 (433)
. ...+...++. -|+.+.+..-.. ....+++.....+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~----~p~~~l~~~~~~~ 197 (203)
T 3h2b_A 146 SLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR----FPHAYLTAEASLE 197 (203)
T ss_dssp SCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT----SSEEEEEEEECC-
T ss_pred chhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC----Ccchhhhhhhhhh
Confidence 3 4566666644 477777664222 3445555555443
No 477
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=58.12 E-value=17 Score=33.58 Aligned_cols=108 Identities=10% Similarity=0.063 Sum_probs=61.3
Q ss_pred CCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcc-ccc------ccC
Q psy11646 33 DNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNL-ESI------FLA 103 (433)
Q Consensus 33 ~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l-~~~------~~~ 103 (433)
.+.++|=.|++. +..+..++..+...+ .+|+.++.++...+.+++.. ...++.++.+|+.+..- ... ..+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQG-AEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 367889888764 233323333332344 68999999875544443332 11356788999976421 111 115
Q ss_pred cEeEEEEcccccch------------hhHH-----------HHHHHHHHhccCCCEEEEEe
Q psy11646 104 KFNKIFSFYCLHWV------------QDQR-----------QAISNIYNLLMPGGEVLLLL 141 (433)
Q Consensus 104 ~fD~Vis~~~l~~~------------~d~~-----------~~l~~i~~~LkpGG~lll~~ 141 (433)
..|+++.+..+... +++. .+.+.+...++.+|.++...
T Consensus 108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 78999987654321 1111 23445556677788877754
No 478
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=57.91 E-value=12 Score=32.16 Aligned_cols=76 Identities=17% Similarity=0.118 Sum_probs=49.5
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN 254 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~ 254 (433)
+.+..+++|..+... ....+|+|++++... .....+.-+.++|++||.+++-......
T Consensus 90 ~~v~~~~~d~~~~~~--------~~~~~D~i~~~~~~~--------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 147 (204)
T 3e05_A 90 RNVTLVEAFAPEGLD--------DLPDPDRVFIGGSGG--------------MLEEIIDAVDRRLKSEGVIVLNAVTLDT 147 (204)
T ss_dssp TTEEEEECCTTTTCT--------TSCCCSEEEESCCTT--------------CHHHHHHHHHHHCCTTCEEEEEECBHHH
T ss_pred CcEEEEeCChhhhhh--------cCCCCCEEEECCCCc--------------CHHHHHHHHHHhcCCCeEEEEEeccccc
Confidence 456667777643211 124689999887542 1235677888899999999998777666
Q ss_pred HHHHHHHHhcc-cceeEEec
Q psy11646 255 VVCLETKFQIF-FENVSIAK 273 (433)
Q Consensus 255 ~~~~~~~l~~~-F~~v~~~K 273 (433)
...+...++.. | .+.+..
T Consensus 148 ~~~~~~~l~~~g~-~~~~~~ 166 (204)
T 3e05_A 148 LTKAVEFLEDHGY-MVEVAC 166 (204)
T ss_dssp HHHHHHHHHHTTC-EEEEEE
T ss_pred HHHHHHHHHHCCC-ceeEEE
Confidence 66666666443 5 544443
No 479
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=57.55 E-value=8.7 Score=33.57 Aligned_cols=72 Identities=13% Similarity=0.069 Sum_probs=47.3
Q ss_pred EEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccC-CcccccccCcEeEEEEcccc
Q psy11646 36 SVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIAD-QNLESIFLAKFNKIFSFYCL 114 (433)
Q Consensus 36 ~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~-~~l~~~~~~~fD~Vis~~~l 114 (433)
+||=.| |+|..+..++..+...+ .+|++++.++..++ ...+++++.+|+.+ ...-...-..+|.|+.+...
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTD-YQIYAGARKVEQVP------QYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSS-CEEEEEESSGGGSC------CCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCC-CEEEEEECCccchh------hcCCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 577666 45777756666666555 79999999875321 12679999999987 32111122468999987665
Q ss_pred c
Q psy11646 115 H 115 (433)
Q Consensus 115 ~ 115 (433)
.
T Consensus 74 ~ 74 (219)
T 3dqp_A 74 G 74 (219)
T ss_dssp T
T ss_pred C
Confidence 4
No 480
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=57.51 E-value=1.1e+02 Score=30.41 Aligned_cols=181 Identities=13% Similarity=0.031 Sum_probs=93.1
Q ss_pred CEEEEECCCCChhHH-HHhcccCCCCCcEEEEEeCCHHHH--------HHHHhhcC---------CCCeEEEEecccCCc
Q psy11646 35 ESVLDVGCGPGNVTS-KLLLPNLPKSVVKLVGLDVSPNMI--------KHAKNHHT---------NPKLEFVVANIADQN 96 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~-~~l~~~~~~~~~~v~gvDiS~~~l--------~~A~~~~~---------~~~i~~~~~Di~~~~ 96 (433)
.+|-=||+|.-..++ ..++. .+ ..|++.|++++.. +.+.++-. ..++++ ..|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~---aG-~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~a-- 127 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGL---AG-IETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFHK-- 127 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TT-CEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGGG--
T ss_pred CEEEEECCCHHHHHHHHHHHH---CC-CeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHHH--
Confidence 578889998633321 22221 33 6999999999821 11111100 012332 223221
Q ss_pred ccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccceeeeecccc-
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVRTYRCLLFT- 175 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r~~~m~pl~- 175 (433)
-...|+|+..-.- ...-...+++++...++|+..+.... +.-++..+...+.. -.++.. ...+.|..
T Consensus 128 -----l~~aDlVIeAVpe-~~~vk~~v~~~l~~~~~~~aIlasnT-Ssl~i~~ia~~~~~---p~r~iG--~HffnPv~~ 195 (460)
T 3k6j_A 128 -----LSNCDLIVESVIE-DMKLKKELFANLENICKSTCIFGTNT-SSLDLNEISSVLRD---PSNLVG--IHFFNPANV 195 (460)
T ss_dssp -----CTTCSEEEECCCS-CHHHHHHHHHHHHTTSCTTCEEEECC-SSSCHHHHHTTSSS---GGGEEE--EECCSSTTT
T ss_pred -----HccCCEEEEcCCC-CHHHHHHHHHHHHhhCCCCCEEEecC-CChhHHHHHHhccC---CcceEE--EEecchhhh
Confidence 1457998876541 12223567888999999887654322 22333332221111 011111 11122332
Q ss_pred --CceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC
Q psy11646 176 --GVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG 243 (433)
Q Consensus 176 --gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG 243 (433)
.++.+.+.-+++++.+.+...+..-+-..|+.. ++.| +...+++.+.++-|..++...|
T Consensus 196 m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~---d~pG------fi~Nril~~~~~EA~~l~~~~G 256 (460)
T 3k6j_A 196 IRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVG---NCKS------FVFNRLLHVYFDQSQKLMYEYG 256 (460)
T ss_dssp CCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEES---SCCH------HHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEe---cccH------HHHHHHHHHHHHHHHHHHHHcC
Confidence 345566666777777777666655554555443 2333 5667777777777777774444
No 481
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=57.29 E-value=57 Score=30.57 Aligned_cols=95 Identities=11% Similarity=-0.065 Sum_probs=59.2
Q ss_pred CCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc-cccccCcEeEEEEcc
Q psy11646 34 NESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL-ESIFLAKFNKIFSFY 112 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l-~~~~~~~fD~Vis~~ 112 (433)
..+|+=+|+ |..+..++..+...+ . ++.+|.+++.++ +++ .++.+..+|..+... ....-+..|.|++..
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g-~-v~vid~~~~~~~-~~~----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSE-V-FVLAEDENVRKK-VLR----SGANFVHGDPTRVSDLEKANVRGARAVIVDL 185 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSC-E-EEEESCGGGHHH-HHH----TTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCC-c-EEEEeCChhhhh-HHh----CCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence 457888886 667655555444444 5 999999999988 665 368899999876432 112236789888754
Q ss_pred cccchhhHHHHHHHHHHhccCCCEEEEE
Q psy11646 113 CLHWVQDQRQAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 113 ~l~~~~d~~~~l~~i~~~LkpGG~lll~ 140 (433)
.-. ..........+.+.|...++..
T Consensus 186 ~~d---~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 186 ESD---SETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp SSH---HHHHHHHHHHHTTCTTSEEEEE
T ss_pred Ccc---HHHHHHHHHHHHHCCCCeEEEE
Confidence 311 1122233455666777666654
No 482
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=57.28 E-value=14 Score=34.02 Aligned_cols=84 Identities=15% Similarity=0.165 Sum_probs=53.4
Q ss_pred CCCCeEEEecCCCCCCCCCchhHHHHHHH-HHHHHHHHHHhccCCCeEEEEEee----cCCHHHHHHHHhcccceeEEec
Q psy11646 199 DEKVDLVVFDGAPDVTGLHDLDEHLQGLL-LIGALNITTFLLKPGGTFVGKIFR----SRNVVCLETKFQIFFENVSIAK 273 (433)
Q Consensus 199 ~~~~dlVvsD~ap~~tG~~~~D~~~~~~L-~~~al~ia~~~L~~gG~fv~Kif~----g~~~~~~~~~l~~~F~~v~~~K 273 (433)
...+|+|++|.... .+. ...+ ....+..+.++|+|||.+++-.-. ......+...++..|..|....
T Consensus 150 ~~~fD~Ii~d~~~~-~~~-------~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~ 221 (281)
T 1mjf_A 150 NRGFDVIIADSTDP-VGP-------AKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYS 221 (281)
T ss_dssp CCCEEEEEEECCCC-C------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEE
T ss_pred cCCeeEEEECCCCC-CCc-------chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEE
Confidence 46799999987531 111 1111 234566777999999999987422 1125677788888899988765
Q ss_pred -CCCCcccccceeEEEeec
Q psy11646 274 -PKSSRNSSIESFIVCQNY 291 (433)
Q Consensus 274 -P~~sr~~s~E~~~v~~~~ 291 (433)
+-++. +..-.|++|..-
T Consensus 222 ~~vP~~-~g~~~~~~as~~ 239 (281)
T 1mjf_A 222 FPVIGY-ASPWAFLVGVKG 239 (281)
T ss_dssp ECCTTS-SSSEEEEEEEES
T ss_pred EecCCC-CceEEEEEeeCC
Confidence 44554 444567777653
No 483
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=57.07 E-value=26 Score=32.85 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=49.1
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCH----HHHHHHHhhcC---CCCeEEEEecccCCcccccccCcE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSP----NMIKHAKNHHT---NPKLEFVVANIADQNLESIFLAKF 105 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~----~~l~~A~~~~~---~~~i~~~~~Di~~~~l~~~~~~~f 105 (433)
.+.+||=.| |+|..+..++..+...+ .+|++++.++ ..+...+.... ..+++++.+|+.+...-...-..+
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLKLN-QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCC-CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 367899777 45666655555554444 7999999843 33333333211 057899999997642111122468
Q ss_pred eEEEEcccc
Q psy11646 106 NKIFSFYCL 114 (433)
Q Consensus 106 D~Vis~~~l 114 (433)
|+|+.....
T Consensus 102 d~Vih~A~~ 110 (351)
T 3ruf_A 102 DHVLHQAAL 110 (351)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999987664
No 484
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=56.69 E-value=2e+02 Score=30.44 Aligned_cols=183 Identities=17% Similarity=0.194 Sum_probs=103.2
Q ss_pred CEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc------------CC------CCeEEEEecccCCc
Q psy11646 35 ESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH------------TN------PKLEFVVANIADQN 96 (433)
Q Consensus 35 ~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~------------~~------~~i~~~~~Di~~~~ 96 (433)
.+|-=||+|+-...+..... ..+..|+..|++++.++.+++.. .. .++. ...|...
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a---~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 390 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFA---RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLR-FSSSTKE-- 390 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHH---TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEE-EESCGGG--
T ss_pred cEEEEEcccHHHHHHHHHHH---hCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhc-ccCcHHH--
Confidence 58999999986655333222 23379999999999988776543 00 1111 1111111
Q ss_pred ccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccC-CchhhHHHhhhcCCCccccccceee-eeccc
Q psy11646 97 LESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAF-NPIYDLYEKLSRKPKWTEYTQVRTY-RCLLF 174 (433)
Q Consensus 97 l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~-~p~~~~~~~~~~~~~W~~~~~~r~~-~m~pl 174 (433)
+ ...|+|+-. +.+.++-..++++++-.+++|+..+. .+++ -++..+...... =.+++.-+.. +..-.
T Consensus 391 l-----~~aDlVIEA-V~E~l~iK~~vf~~le~~~~~~aIlA--SNTSsl~i~~ia~~~~~---p~r~ig~HFfnP~~~m 459 (742)
T 3zwc_A 391 L-----STVDLVVEA-VFEDMNLKKKVFAELSALCKPGAFLC--TNTSALNVDDIASSTDR---PQLVIGTHFFSPAHVM 459 (742)
T ss_dssp G-----GSCSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEEE--ECCSSSCHHHHHTTSSC---GGGEEEEECCSSTTTC
T ss_pred H-----hhCCEEEEe-ccccHHHHHHHHHHHhhcCCCCceEE--ecCCcCChHHHHhhcCC---ccccccccccCCCCCC
Confidence 1 346888764 44555556789999999999987544 3333 233333221111 1111111111 11234
Q ss_pred cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC
Q psy11646 175 TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG 243 (433)
Q Consensus 175 ~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG 243 (433)
+-++.+.+..|++++...........+-..|++- ++.| +....+..+.++-|.+++..|.
T Consensus 460 ~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~vk---d~pG------Fi~NRi~~~~~~ea~~l~~eG~ 519 (742)
T 3zwc_A 460 RLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVG---NCYG------FVGNRMLAPYYNQGFFLLEEGS 519 (742)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEECC---CSTT------TTHHHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEecCCCCCHHHHHHHHHHHHHhCCCCcccC---CCCC------ccHHHHhhHHHHHHHHHHHcCC
Confidence 5677888999999888777766654443444442 2333 4455666666666666666553
No 485
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=56.61 E-value=42 Score=30.97 Aligned_cols=183 Identities=11% Similarity=0.069 Sum_probs=86.7
Q ss_pred CCEEEEECCCCChhHH-HHhcccCCCCCcEEEEEeCCHHHHHHHHhhc----------CC---------------CCeEE
Q psy11646 34 NESVLDVGCGPGNVTS-KLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH----------TN---------------PKLEF 87 (433)
Q Consensus 34 ~~~VLDIGcG~G~~~~-~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~----------~~---------------~~i~~ 87 (433)
-.+|.=||+|.-..+. ..++. .+ .+|+++|.+++.++.+++.. +. .++.+
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~---~G-~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 90 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA---TG-HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT 90 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TT-CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh---CC-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE
Confidence 3579999997633321 22221 33 68999999999888764321 00 01222
Q ss_pred EEecccCCcccccccCcEeEEEEcccccchhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHhhhcCCCccccccce
Q psy11646 88 VVANIADQNLESIFLAKFNKIFSFYCLHWVQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEKLSRKPKWTEYTQVR 167 (433)
Q Consensus 88 ~~~Di~~~~l~~~~~~~fD~Vis~~~l~~~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~~~~~~~W~~~~~~r 167 (433)
..|..+ .-...|+|+..-.-. ..-...+++++...++|+..+ ++....-+.......+.. -.++. .
T Consensus 91 -~~~~~~------~~~~aD~Vi~avp~~-~~~~~~v~~~l~~~~~~~~iv-~s~ts~i~~~~l~~~~~~---~~~~~--g 156 (302)
T 1f0y_A 91 -STDAAS------VVHSTDLVVEAIVEN-LKVKNELFKRLDKFAAEHTIF-ASNTSSLQITSIANATTR---QDRFA--G 156 (302)
T ss_dssp -ESCHHH------HTTSCSEEEECCCSC-HHHHHHHHHHHTTTSCTTCEE-EECCSSSCHHHHHTTSSC---GGGEE--E
T ss_pred -ecCHHH------hhcCCCEEEEcCcCc-HHHHHHHHHHHHhhCCCCeEE-EECCCCCCHHHHHHhcCC---cccEE--E
Confidence 112110 114578888764311 112356778888888887644 332222232222211110 01111 1
Q ss_pred eeeeccc---cCceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCC
Q psy11646 168 TYRCLLF---TGVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGG 243 (433)
Q Consensus 168 ~~~m~pl---~gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG 243 (433)
...+.|. +.+..+.+.-++++..+.+...+..-+-..+... +..| ....++..+.++-+..++..||
T Consensus 157 ~h~~~P~~~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~---~~~g------~i~nr~l~~~~~Ea~~l~~~g~ 226 (302)
T 1f0y_A 157 LHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCK---DTPG------FIVNRLLVPYLMEAIRLYERGD 226 (302)
T ss_dssp EEECSSTTTCCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEEC---SCTT------TTHHHHHHHHHHHHHHHHHTTS
T ss_pred EecCCCcccCceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEec---Cccc------ccHHHHHHHHHHHHHHHHHcCC
Confidence 1112222 2334445555566665555555544333333332 1233 2333444455666666666665
No 486
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=56.52 E-value=55 Score=29.68 Aligned_cols=60 Identities=27% Similarity=0.191 Sum_probs=35.1
Q ss_pred CceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCC
Q psy11646 176 GVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRN 254 (433)
Q Consensus 176 gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~ 254 (433)
.+.++++|+.+. ....+|+|++-.. ++-+.. .-....+.-..++|+|||.|++--....+
T Consensus 124 ~v~~~~~D~~~~----------~~~~~d~v~~~~~-----l~~~~~----~~~~~~l~~i~~~LkpGG~lii~e~~~~~ 183 (261)
T 4gek_A 124 PVDVIEGDIRDI----------AIENASMVVLNFT-----LQFLEP----SERQALLDKIYQGLNPGGALVLSEKFSFE 183 (261)
T ss_dssp CEEEEESCTTTC----------CCCSEEEEEEESC-----GGGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEBCCS
T ss_pred eEEEeecccccc----------cccccccceeeee-----eeecCc----hhHhHHHHHHHHHcCCCcEEEEEeccCCC
Confidence 466777776542 2345788877532 222211 11234567778899999999875444433
No 487
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=55.81 E-value=32 Score=30.30 Aligned_cols=41 Identities=27% Similarity=0.380 Sum_probs=27.4
Q ss_pred HHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEE
Q psy11646 193 IFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVG 247 (433)
Q Consensus 193 il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~ 247 (433)
+...+....||+|.+|.... .. ...+.-+..+|+|||.+++
T Consensus 121 ~l~~~~~~~fD~V~~d~~~~-----~~---------~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 121 VMSRLANDSYQLVFGQVSPM-----DL---------KALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp HGGGSCTTCEEEEEECCCTT-----TH---------HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHhcCCCcCeEEEcCcHH-----HH---------HHHHHHHHHHcCCCcEEEE
Confidence 33344456899999997431 11 1245667789999999876
No 488
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=55.50 E-value=23 Score=31.99 Aligned_cols=79 Identities=9% Similarity=0.053 Sum_probs=47.6
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEE-eCCHHHHHHHHhhc--CCCCeEEEEecccCCcc-ccc------cc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGL-DVSPNMIKHAKNHH--TNPKLEFVVANIADQNL-ESI------FL 102 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gv-DiS~~~l~~A~~~~--~~~~i~~~~~Di~~~~l-~~~------~~ 102 (433)
.+.++|=.|++.|- +..++..+...+ .+|+.+ +.++...+.+.+.. ...++.++.+|+.+..- ... ..
T Consensus 7 ~~k~vlVTGas~GI-G~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDI-GRACAIRFAQEG-ANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTT-CEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchH-HHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46788888877663 324443333344 688877 66666555554433 23568889999976421 111 11
Q ss_pred CcEeEEEEccc
Q psy11646 103 AKFNKIFSFYC 113 (433)
Q Consensus 103 ~~fD~Vis~~~ 113 (433)
+..|+++.+..
T Consensus 85 g~id~lv~nAg 95 (259)
T 3edm_A 85 GEIHGLVHVAG 95 (259)
T ss_dssp CSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998764
No 489
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=55.07 E-value=44 Score=28.56 Aligned_cols=96 Identities=15% Similarity=0.234 Sum_probs=58.2
Q ss_pred EEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEccccc
Q psy11646 36 SVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFYCLH 115 (433)
Q Consensus 36 ~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~ 115 (433)
+||=.|+ +|..+..++..+...+ .+|++++.++..++... .+++++.+|+.+... . .-..+|+|+.+....
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~-----~~~~~~~~D~~d~~~-~-~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRG-HEVTAIVRNAGKITQTH-----KDINILQKDIFDLTL-S-DLSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTT-CEEEEEESCSHHHHHHC-----SSSEEEECCGGGCCH-H-HHTTCSEEEECCCSS
T ss_pred eEEEEcC-CchhHHHHHHHHHhCC-CEEEEEEcCchhhhhcc-----CCCeEEeccccChhh-h-hhcCCCEEEECCcCC
Confidence 5776664 4555544544444444 79999999987655432 578999999987543 2 225689999877653
Q ss_pred ch--hhHHHHHHHHHHhccC--CCEEEEE
Q psy11646 116 WV--QDQRQAISNIYNLLMP--GGEVLLL 140 (433)
Q Consensus 116 ~~--~d~~~~l~~i~~~Lkp--GG~lll~ 140 (433)
.. ........++.+.++. .+++++.
T Consensus 73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 73 PDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp TTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred ccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 21 1123345556666654 3566554
No 490
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=55.03 E-value=25 Score=31.55 Aligned_cols=79 Identities=13% Similarity=0.179 Sum_probs=51.1
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcc-ccc------ccCcE
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNL-ESI------FLAKF 105 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l-~~~------~~~~f 105 (433)
.+.++|=.|++.| .+..+...+...+ .+|+.+|.+++.++.+.+.. ..++.++.+|+.+..- ... ..+..
T Consensus 7 ~~k~vlVTGas~g-IG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 7 EGKSALITGSARG-IGRAFAEAYVREG-ATVAIADIDIERARQAAAEI-GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh-CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 4678888886655 3434444333344 79999999998877666554 2467889999976421 110 12478
Q ss_pred eEEEEcccc
Q psy11646 106 NKIFSFYCL 114 (433)
Q Consensus 106 D~Vis~~~l 114 (433)
|+++.+...
T Consensus 84 d~lv~~Ag~ 92 (259)
T 4e6p_A 84 DILVNNAAL 92 (259)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCc
Confidence 999987654
No 491
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=54.84 E-value=27 Score=38.50 Aligned_cols=102 Identities=20% Similarity=0.262 Sum_probs=70.0
Q ss_pred CCCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhc-CCCCeEEEEecccCCcccccccCcEeEEEE
Q psy11646 32 TDNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHH-TNPKLEFVVANIADQNLESIFLAKFNKIFS 110 (433)
Q Consensus 32 ~~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~-~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis 110 (433)
..+.++||+|.|+-+=. | .+.|.. ..|+.+|+-|.+ +... ......|+++|...... .....+|.|.|
T Consensus 820 ~~~~~~lDlGTGPE~Ri---L-sLiP~~-~pvtm~D~RP~a----e~~~~w~~~T~f~~~DyL~~~~--~~~~~~D~vt~ 888 (1289)
T 1ej6_A 820 YDGDVVLDLGTGPEAKI---L-ELIPAT-SPVTCVDIRPTA----QPSGCWNVRTTFLELDYLSDGW--ITGVRGDIVTC 888 (1289)
T ss_dssp CTTCCEEEESCCSSCGG---G-GTSCTT-SCEEEEESSCCC----SCSTTBSSCEEEEESCTTSSSC--GGGCCCSEEEE
T ss_pred cccceEEEccCCCccee---e-eecCCC-CceEEecccCch----hhhccccccceeeEccccccce--eecCCCcEEEE
Confidence 46889999999997643 2 344555 689999998753 1111 34568999999765322 22367999999
Q ss_pred cccccch-----hhHHHHHHHHHHhccCCC--EEEEEeccC
Q psy11646 111 FYCLHWV-----QDQRQAISNIYNLLMPGG--EVLLLLNAF 144 (433)
Q Consensus 111 ~~~l~~~-----~d~~~~l~~i~~~LkpGG--~lll~~~~~ 144 (433)
...|-.. -+....++++.+..++.| ++++...+.
T Consensus 889 i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~~~~l~lQlNcp 929 (1289)
T 1ej6_A 889 MLSLGAAAAGKSMTFDAAFQQLIKVLSKSTANVVLVQVNCP 929 (1289)
T ss_dssp CSCHHHHHHHHTCCHHHHHHHHHHHHHTSCCSEEEEECCCC
T ss_pred EeechhhhhccCCcHHHHHHHHHHHHHhcCccEEEEEecCC
Confidence 8887643 246778888888888766 566665443
No 492
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=54.69 E-value=32 Score=31.62 Aligned_cols=106 Identities=11% Similarity=0.150 Sum_probs=60.7
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHH-HHHHHHhhc--CCCCeEEEEecccCCcc-ccc------cc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPN-MIKHAKNHH--TNPKLEFVVANIADQNL-ESI------FL 102 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~-~l~~A~~~~--~~~~i~~~~~Di~~~~l-~~~------~~ 102 (433)
.+.+||=.|++.|- +..++..+...+ .+|+.++.++. ..+.+.+.. ...++.++.+|+.+..- ... ..
T Consensus 46 ~gk~vlVTGas~GI-G~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGI-GRAVSIAFAKEG-ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHH-HHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35688888876653 324444333344 68999998765 333333322 23578899999976421 110 11
Q ss_pred CcEeEEEEcccccc----h-----hhHH-----------HHHHHHHHhccCCCEEEEE
Q psy11646 103 AKFNKIFSFYCLHW----V-----QDQR-----------QAISNIYNLLMPGGEVLLL 140 (433)
Q Consensus 103 ~~fD~Vis~~~l~~----~-----~d~~-----------~~l~~i~~~LkpGG~lll~ 140 (433)
+..|+++.+..... + ++++ .+.+.+.+.++.+|.++..
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 47899998744321 1 1111 2345566677788887765
No 493
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=54.58 E-value=22 Score=32.13 Aligned_cols=81 Identities=17% Similarity=0.219 Sum_probs=49.4
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcC----CCCeEEEEecccCCc-cccc------c
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHT----NPKLEFVVANIADQN-LESI------F 101 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~----~~~i~~~~~Di~~~~-l~~~------~ 101 (433)
.+.+||=.|++.| .+..++..+...+ .+|++++.++...+.+.+... ..++.++.+|+.+.. .... .
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQG-IGRAFAEALLLKG-AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCc-HHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 3567888886554 4434444333344 799999999877665443331 246788899987632 1110 1
Q ss_pred cCcEeEEEEccccc
Q psy11646 102 LAKFNKIFSFYCLH 115 (433)
Q Consensus 102 ~~~fD~Vis~~~l~ 115 (433)
.+..|+++.+....
T Consensus 84 ~g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 84 FGRLDILVNNAGVN 97 (267)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 14689999877654
No 494
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=54.37 E-value=45 Score=29.74 Aligned_cols=36 Identities=19% Similarity=0.285 Sum_probs=25.3
Q ss_pred CCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEE
Q psy11646 199 DEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGK 248 (433)
Q Consensus 199 ~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~K 248 (433)
...+|+|++|+.. ..+ ...+.-+..+|+|||.+++-
T Consensus 134 ~~~fD~V~~d~~~--------~~~------~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 134 CPAFDLIFIDADK--------PNN------PHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CCCCSEEEECSCG--------GGH------HHHHHHHHHTCCTTCEEEEE
T ss_pred CCCeEEEEECCch--------HHH------HHHHHHHHHhcCCCeEEEEe
Confidence 3589999998741 111 23566677999999998764
No 495
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=54.25 E-value=36 Score=30.82 Aligned_cols=79 Identities=9% Similarity=0.075 Sum_probs=47.1
Q ss_pred CCCEEEEECCC-CChhHHHHhcccCCCCCcEEEEEeCCHH---HHHHHHhhcCCCCeEEEEecccCCcc-ccc------c
Q psy11646 33 DNESVLDVGCG-PGNVTSKLLLPNLPKSVVKLVGLDVSPN---MIKHAKNHHTNPKLEFVVANIADQNL-ESI------F 101 (433)
Q Consensus 33 ~~~~VLDIGcG-~G~~~~~~l~~~~~~~~~~v~gvDiS~~---~l~~A~~~~~~~~i~~~~~Di~~~~l-~~~------~ 101 (433)
.+.+||=.|++ +|..+..++..+...+ .+|+.++.++. .++..++.. .++.++.+|+.+..- ... .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQG-ATLAFTYLNESLEKRVRPIAQEL--NSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTT-CEEEEEESSTTTHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36788989976 2445534444443444 78999998875 333333322 247788899876321 110 1
Q ss_pred cCcEeEEEEcccc
Q psy11646 102 LAKFNKIFSFYCL 114 (433)
Q Consensus 102 ~~~fD~Vis~~~l 114 (433)
.+..|+++.+...
T Consensus 82 ~g~id~lv~nAg~ 94 (275)
T 2pd4_A 82 LGSLDFIVHSVAF 94 (275)
T ss_dssp TSCEEEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 2478999987654
No 496
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=53.99 E-value=4.8 Score=33.27 Aligned_cols=71 Identities=14% Similarity=0.224 Sum_probs=42.1
Q ss_pred CHHHHHHHHhhcCC---CCeEEEEecccCCcccccccCcEeEEEEccccc-c-hhhHHHHHHHHHHhccCCCEEEE
Q psy11646 69 SPNMIKHAKNHHTN---PKLEFVVANIADQNLESIFLAKFNKIFSFYCLH-W-VQDQRQAISNIYNLLMPGGEVLL 139 (433)
Q Consensus 69 S~~~l~~A~~~~~~---~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~~l~-~-~~d~~~~l~~i~~~LkpGG~lll 139 (433)
.|+.++.++..+.. ..+...-.|=-....-+.+..+||.|+....-. . ..-+..++..+.+.|||||.+..
T Consensus 21 ~pe~le~~k~~~~~~~~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 21 TPELVENTKAQAASKKVKFVDQFLINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SHHHHHHHHHHHHHTTEEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CHHHHHHHHHhhhccccchhhHHHHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 46677777665511 123333333111111123348999998865443 2 22248899999999999999874
No 497
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=53.25 E-value=29 Score=31.28 Aligned_cols=79 Identities=8% Similarity=0.082 Sum_probs=45.7
Q ss_pred CCCEEEEECCCC-ChhHHHHhcccCCCCCcEEEEEeCCH---HHHHHHHhhcCCCCeEEEEecccCCcc-ccc------c
Q psy11646 33 DNESVLDVGCGP-GNVTSKLLLPNLPKSVVKLVGLDVSP---NMIKHAKNHHTNPKLEFVVANIADQNL-ESI------F 101 (433)
Q Consensus 33 ~~~~VLDIGcG~-G~~~~~~l~~~~~~~~~~v~gvDiS~---~~l~~A~~~~~~~~i~~~~~Di~~~~l-~~~------~ 101 (433)
.+.+||=.|+++ |..+..+...+...+ .+|+.++.++ ..++...+.. .+..++.+|+.+..- ... .
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREG-AELAFTYQNDKLKGRVEEFAAQL--GSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESSTTTHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEEcCcHHHHHHHHHHHHhc--CCcEEEEccCCCHHHHHHHHHHHHHH
Confidence 356788888762 445534443333344 6899999886 3333333322 234778889876421 110 1
Q ss_pred cCcEeEEEEcccc
Q psy11646 102 LAKFNKIFSFYCL 114 (433)
Q Consensus 102 ~~~fD~Vis~~~l 114 (433)
.+..|+++.+...
T Consensus 85 ~g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 85 WPKFDGFVHSIGF 97 (265)
T ss_dssp CSSEEEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1478999987654
No 498
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=53.19 E-value=34 Score=31.04 Aligned_cols=73 Identities=25% Similarity=0.270 Sum_probs=46.0
Q ss_pred CceEEEccccccchHHHHHHhcCCCCCeEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCCH
Q psy11646 176 GVIQVQGDITKESTIKEIFSHFDDEKVDLVVFDGAPDVTGLHDLDEHLQGLLLIGALNITTFLLKPGGTFVGKIFRSRNV 255 (433)
Q Consensus 176 gv~~iqgDi~~~~t~~~il~~~~~~~~dlVvsD~ap~~tG~~~~D~~~~~~L~~~al~ia~~~L~~gG~fv~Kif~g~~~ 255 (433)
.+....+|+.+. +....+|+|+++.. +. ...+.-+..+|++||.+++-.......
T Consensus 165 ~v~~~~~d~~~~---------~~~~~~D~V~~~~~-~~---------------~~~l~~~~~~L~pgG~l~~~~~~~~~~ 219 (277)
T 1o54_A 165 RVTIKVRDISEG---------FDEKDVDALFLDVP-DP---------------WNYIDKCWEALKGGGRFATVCPTTNQV 219 (277)
T ss_dssp GEEEECCCGGGC---------CSCCSEEEEEECCS-CG---------------GGTHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred CEEEEECCHHHc---------ccCCccCEEEECCc-CH---------------HHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 455566665442 33457999999752 11 245666778999999999877554445
Q ss_pred HHHHHHHh-cccceeEEec
Q psy11646 256 VCLETKFQ-IFFENVSIAK 273 (433)
Q Consensus 256 ~~~~~~l~-~~F~~v~~~K 273 (433)
..+...++ .-|..+.+.+
T Consensus 220 ~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 220 QETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp HHHHHHHHHSSEEEEEEEC
T ss_pred HHHHHHHHHCCCceeEEEE
Confidence 55555554 3466666554
No 499
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=53.04 E-value=40 Score=30.73 Aligned_cols=80 Identities=8% Similarity=0.063 Sum_probs=49.1
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeC-CHHHHHHHHhhc--CCCCeEEEEecccCCcccc-c------cc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDV-SPNMIKHAKNHH--TNPKLEFVVANIADQNLES-I------FL 102 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDi-S~~~l~~A~~~~--~~~~i~~~~~Di~~~~l~~-~------~~ 102 (433)
.+.++|=.|++.|- +..++..+...+ .+|+.++. +++.++...+.. ...++.++.+|+.+...-. . ..
T Consensus 28 ~~k~~lVTGas~GI-G~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRRGI-GLGIARALAASG-FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETTTSHH-HHHHHHHHHHTT-CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHH-HHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46778888876653 324443333344 68999985 666665554443 3457889999998743111 1 11
Q ss_pred CcEeEEEEcccc
Q psy11646 103 AKFNKIFSFYCL 114 (433)
Q Consensus 103 ~~fD~Vis~~~l 114 (433)
+..|+++.+...
T Consensus 106 g~iD~lvnnAg~ 117 (280)
T 4da9_A 106 GRIDCLVNNAGI 117 (280)
T ss_dssp SCCCEEEEECC-
T ss_pred CCCCEEEECCCc
Confidence 478999987765
No 500
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=52.90 E-value=1.1e+02 Score=29.42 Aligned_cols=106 Identities=11% Similarity=0.059 Sum_probs=62.4
Q ss_pred CCCEEEEECCCCChhHHHHhcccCCCCCcEEEEEeCCHHHHHHHHhhcCCCCeEEEEecccCCcccccccCcEeEEEEcc
Q psy11646 33 DNESVLDVGCGPGNVTSKLLLPNLPKSVVKLVGLDVSPNMIKHAKNHHTNPKLEFVVANIADQNLESIFLAKFNKIFSFY 112 (433)
Q Consensus 33 ~~~~VLDIGcG~G~~~~~~l~~~~~~~~~~v~gvDiS~~~l~~A~~~~~~~~i~~~~~Di~~~~l~~~~~~~fD~Vis~~ 112 (433)
.+.+||.++-+-|..+..+ . .. .+++.+.-|-......+.+- . .... ....+ .....||+|+...
T Consensus 45 ~~~~~l~~n~~~g~~~~~~-~----~~-~~~~~~~~~~~~~~~l~~~~-~-~~~~-~~~~~------~~~~~~d~v~~~~ 109 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPL-E----GR-MAVERLETSRAAFRCLTASG-L-QARL-ALPWE------AAAGAYDLVVLAL 109 (381)
T ss_dssp CSSEEEESSCTTSTTTGGG-B----TT-BEEEEEECBHHHHHHHHHTT-C-CCEE-CCGGG------SCTTCEEEEEEEC
T ss_pred hCCcEEEecCCCCcccccc-C----CC-CceEEEeCcHHHHHHHHHcC-C-Cccc-cCCcc------CCcCCCCEEEEEC
Confidence 3579999999999866222 2 12 36777765655544444331 1 1111 11111 1227899999866
Q ss_pred cccc-hhhHHHHHHHHHHhccCCCEEEEEeccCCchhhHHHh
Q psy11646 113 CLHW-VQDQRQAISNIYNLLMPGGEVLLLLNAFNPIYDLYEK 153 (433)
Q Consensus 113 ~l~~-~~d~~~~l~~i~~~LkpGG~lll~~~~~~p~~~~~~~ 153 (433)
.=+- ....+..+.++.+.|+|||.+++.......+......
T Consensus 110 Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g~~~~~~~ 151 (381)
T 3dmg_A 110 PAGRGTAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKE 151 (381)
T ss_dssp CGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGGGTHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHHhCCCCCEEEEEEccHHHHHHHHHH
Confidence 6321 1234677889999999999998876444444333333
Done!