Query psy11648
Match_columns 584
No_of_seqs 267 out of 3793
Neff 10.7
Searched_HMMs 46136
Date Fri Aug 16 15:23:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11648.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11648hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.4E-50 3E-55 453.8 31.2 503 2-549 73-584 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.7E-48 3.8E-53 436.8 33.0 504 1-547 96-605 (968)
3 KOG4194|consensus 100.0 1.1E-38 2.4E-43 304.0 7.7 296 187-519 148-446 (873)
4 KOG4194|consensus 100.0 9.3E-38 2E-42 297.7 9.5 401 140-576 53-462 (873)
5 KOG0472|consensus 100.0 1E-39 2.2E-44 297.8 -8.2 494 30-576 13-545 (565)
6 KOG0472|consensus 100.0 1.6E-37 3.6E-42 283.3 -14.2 482 30-550 49-542 (565)
7 KOG0618|consensus 100.0 2.5E-33 5.4E-38 281.6 -2.4 487 2-579 2-496 (1081)
8 KOG0618|consensus 100.0 1E-32 2.3E-37 277.2 -5.9 459 30-573 2-466 (1081)
9 KOG0444|consensus 100.0 6.1E-31 1.3E-35 253.3 -2.2 373 138-577 6-380 (1255)
10 KOG0444|consensus 99.9 1.1E-28 2.4E-33 237.8 -2.0 356 1-398 10-373 (1255)
11 KOG4237|consensus 99.9 7.9E-25 1.7E-29 200.4 3.5 411 48-522 50-498 (498)
12 PLN03210 Resistant to P. syrin 99.9 4.1E-20 8.9E-25 208.0 27.4 341 203-570 549-904 (1153)
13 KOG4237|consensus 99.9 1.6E-23 3.5E-28 191.9 -1.3 297 74-400 50-359 (498)
14 PLN03210 Resistant to P. syrin 99.8 1.6E-19 3.4E-24 203.3 26.3 326 230-577 550-888 (1153)
15 PRK15387 E3 ubiquitin-protein 99.8 5E-20 1.1E-24 192.2 18.0 258 265-572 201-458 (788)
16 PRK15387 E3 ubiquitin-protein 99.8 1.1E-19 2.5E-24 189.6 13.6 141 189-357 323-463 (788)
17 PRK15370 E3 ubiquitin-protein 99.7 1.9E-17 4.1E-22 174.2 13.1 246 266-572 179-428 (754)
18 PRK15370 E3 ubiquitin-protein 99.7 2.4E-17 5.2E-22 173.5 9.2 243 28-352 180-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 3.2E-17 7E-22 160.7 4.0 256 2-302 2-291 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 3.7E-17 8E-22 160.3 2.9 282 243-571 3-319 (319)
21 KOG0617|consensus 99.5 2.8E-16 6.1E-21 128.0 -4.6 161 412-578 31-192 (264)
22 KOG0617|consensus 99.4 2.2E-15 4.7E-20 122.9 -4.0 163 135-333 29-191 (264)
23 KOG1909|consensus 99.3 1.4E-13 3.1E-18 125.4 -2.1 203 69-302 92-311 (382)
24 KOG1909|consensus 99.3 5.6E-13 1.2E-17 121.6 1.2 187 384-571 89-310 (382)
25 KOG3207|consensus 99.2 3.7E-12 8E-17 119.6 1.8 209 362-572 120-339 (505)
26 PF14580 LRR_9: Leucine-rich r 99.2 2.8E-11 6E-16 103.9 4.7 109 22-154 15-128 (175)
27 PF14580 LRR_9: Leucine-rich r 99.1 5.8E-11 1.3E-15 102.0 4.5 124 438-566 18-147 (175)
28 KOG1259|consensus 99.1 2.4E-11 5.3E-16 108.5 2.1 132 438-576 283-416 (490)
29 KOG3207|consensus 99.1 1.6E-11 3.5E-16 115.4 0.3 189 385-575 119-317 (505)
30 PF13855 LRR_8: Leucine rich r 98.9 7.4E-10 1.6E-14 78.1 3.7 59 489-547 2-60 (61)
31 KOG1259|consensus 98.9 2.8E-10 6E-15 101.9 1.8 132 414-553 284-416 (490)
32 KOG0532|consensus 98.9 8.4E-11 1.8E-15 114.2 -2.8 152 417-577 101-252 (722)
33 KOG0532|consensus 98.9 1.3E-10 2.8E-15 113.0 -2.1 192 74-325 79-270 (722)
34 PF13855 LRR_8: Leucine rich r 98.9 2.7E-09 5.8E-14 75.2 4.3 61 464-524 1-61 (61)
35 PLN03150 hypothetical protein; 98.8 6.9E-09 1.5E-13 109.6 7.9 107 466-572 420-528 (623)
36 KOG4658|consensus 98.8 6.1E-09 1.3E-13 112.4 6.7 91 464-554 770-866 (889)
37 COG4886 Leucine-rich repeat (L 98.8 9.6E-09 2.1E-13 103.7 7.4 196 343-552 97-293 (394)
38 COG4886 Leucine-rich repeat (L 98.8 7.3E-09 1.6E-13 104.6 5.6 187 3-251 98-290 (394)
39 KOG4658|consensus 98.8 2.1E-08 4.5E-13 108.3 8.9 128 44-222 523-652 (889)
40 KOG2120|consensus 98.8 1.2E-09 2.5E-14 98.0 -0.6 139 159-299 180-323 (419)
41 KOG2120|consensus 98.7 6.2E-10 1.4E-14 99.6 -3.4 227 44-299 136-373 (419)
42 KOG0531|consensus 98.6 6.8E-09 1.5E-13 104.8 -0.2 80 490-572 234-318 (414)
43 PLN03150 hypothetical protein; 98.6 9.3E-08 2E-12 101.1 8.2 112 440-552 419-532 (623)
44 KOG0531|consensus 98.6 4.6E-09 9.9E-14 106.1 -1.8 220 336-572 69-290 (414)
45 KOG4341|consensus 98.5 3.6E-09 7.8E-14 99.4 -3.8 84 26-112 138-233 (483)
46 KOG4341|consensus 98.5 1.6E-08 3.4E-13 95.2 -1.3 261 136-398 161-437 (483)
47 COG5238 RNA1 Ran GTPase-activa 98.4 2.1E-08 4.5E-13 88.9 -2.4 199 21-251 25-255 (388)
48 PF12799 LRR_4: Leucine Rich r 98.4 3.1E-07 6.7E-12 58.9 2.8 39 537-575 2-40 (44)
49 KOG1859|consensus 98.3 2.8E-08 6E-13 99.8 -5.5 183 132-328 102-292 (1096)
50 KOG1859|consensus 98.2 5.9E-08 1.3E-12 97.5 -3.6 129 139-279 164-293 (1096)
51 KOG2982|consensus 98.2 6.2E-07 1.3E-11 80.8 2.4 92 182-278 65-159 (418)
52 KOG4579|consensus 98.2 6.8E-08 1.5E-12 76.5 -3.5 130 440-572 28-159 (177)
53 COG5238 RNA1 Ran GTPase-activa 98.2 3.2E-07 7E-12 81.5 -0.5 116 238-353 185-317 (388)
54 KOG4579|consensus 98.2 2.5E-07 5.4E-12 73.4 -1.2 122 24-170 25-154 (177)
55 KOG2982|consensus 98.1 4.4E-07 9.6E-12 81.7 -0.7 62 289-352 71-134 (418)
56 PF12799 LRR_4: Leucine Rich r 98.1 4E-06 8.7E-11 53.7 3.3 40 512-552 1-40 (44)
57 PF13306 LRR_5: Leucine rich r 98.1 7.2E-06 1.6E-10 68.1 5.8 102 438-545 11-112 (129)
58 KOG1644|consensus 98.0 7.3E-06 1.6E-10 69.9 5.0 103 464-568 42-149 (233)
59 KOG1644|consensus 98.0 8.5E-06 1.8E-10 69.5 4.5 127 29-201 22-153 (233)
60 PF13306 LRR_5: Leucine rich r 97.9 3.6E-05 7.8E-10 63.9 6.5 34 263-297 10-43 (129)
61 PRK15386 type III secretion pr 97.7 0.00012 2.7E-09 71.2 8.9 137 409-570 47-188 (426)
62 KOG3665|consensus 97.7 4.9E-05 1.1E-09 80.5 5.5 114 183-302 143-263 (699)
63 KOG3665|consensus 97.6 3.8E-05 8.2E-10 81.3 3.3 151 413-566 121-282 (699)
64 PRK15386 type III secretion pr 97.6 0.00053 1.1E-08 67.0 10.0 92 359-472 48-140 (426)
65 KOG2123|consensus 97.2 2.3E-05 5.1E-10 70.2 -3.5 100 438-542 18-123 (388)
66 KOG1947|consensus 96.9 0.00028 6.1E-09 73.5 0.2 85 314-398 187-280 (482)
67 KOG2123|consensus 96.8 8.5E-05 1.8E-09 66.7 -3.1 102 24-145 17-123 (388)
68 KOG2739|consensus 96.6 0.0013 2.9E-08 59.0 2.5 103 464-568 43-152 (260)
69 KOG4308|consensus 96.6 2.5E-05 5.4E-10 79.0 -9.5 17 137-153 202-218 (478)
70 KOG2739|consensus 96.5 0.00097 2.1E-08 59.9 1.3 115 438-555 42-162 (260)
71 KOG1947|consensus 96.3 0.00059 1.3E-08 71.1 -1.5 220 337-571 186-439 (482)
72 PF00560 LRR_1: Leucine Rich R 95.9 0.0029 6.4E-08 33.5 0.7 17 561-577 2-18 (22)
73 PF13504 LRR_7: Leucine rich r 95.9 0.005 1.1E-07 30.2 1.4 15 537-551 2-16 (17)
74 PF13504 LRR_7: Leucine rich r 95.8 0.0053 1.2E-07 30.1 1.2 17 559-575 1-17 (17)
75 PF00560 LRR_1: Leucine Rich R 95.6 0.0062 1.3E-07 32.3 1.1 18 537-554 1-18 (22)
76 smart00370 LRR Leucine-rich re 95.4 0.012 2.5E-07 32.7 1.7 22 559-580 2-23 (26)
77 smart00369 LRR_TYP Leucine-ric 95.4 0.012 2.5E-07 32.7 1.7 22 559-580 2-23 (26)
78 KOG4308|consensus 95.2 0.00017 3.6E-09 73.2 -10.8 89 46-152 89-185 (478)
79 smart00369 LRR_TYP Leucine-ric 94.7 0.025 5.4E-07 31.4 1.8 22 536-557 2-23 (26)
80 smart00370 LRR Leucine-rich re 94.7 0.025 5.4E-07 31.4 1.8 22 536-557 2-23 (26)
81 smart00364 LRR_BAC Leucine-ric 91.0 0.15 3.4E-06 27.9 1.4 18 559-576 2-19 (26)
82 KOG3864|consensus 90.8 0.03 6.5E-07 48.5 -2.2 12 508-519 172-183 (221)
83 smart00364 LRR_BAC Leucine-ric 88.8 0.28 6.1E-06 26.9 1.3 18 536-553 2-19 (26)
84 PF13516 LRR_6: Leucine Rich r 84.9 0.34 7.3E-06 26.1 0.3 20 95-116 3-22 (24)
85 KOG0473|consensus 82.9 0.15 3.2E-06 45.3 -2.5 80 69-153 42-125 (326)
86 KOG3864|consensus 82.7 0.27 5.8E-06 42.8 -1.0 35 264-298 150-185 (221)
87 KOG0473|consensus 82.1 0.035 7.6E-07 49.1 -6.6 85 486-572 40-124 (326)
88 KOG4242|consensus 79.2 3.2 7E-05 41.2 4.8 98 1-107 168-279 (553)
89 smart00365 LRR_SD22 Leucine-ri 78.8 1.8 3.9E-05 23.9 1.8 16 536-551 2-17 (26)
90 KOG3763|consensus 70.4 2.2 4.9E-05 43.2 1.4 64 486-549 216-283 (585)
91 KOG4242|consensus 68.3 43 0.00093 33.7 9.4 34 388-422 355-388 (553)
92 smart00367 LRR_CC Leucine-rich 67.6 4 8.8E-05 22.3 1.5 15 535-549 1-16 (26)
93 smart00368 LRR_RI Leucine rich 65.5 2.9 6.2E-05 23.5 0.6 20 96-117 4-23 (28)
94 KOG3763|consensus 56.3 3.9 8.4E-05 41.6 0.1 67 209-278 215-283 (585)
95 TIGR00864 PCC polycystin catio 22.3 57 0.0012 40.8 2.3 32 494-525 1-32 (2740)
96 TIGR00864 PCC polycystin catio 20.6 45 0.00099 41.6 1.1 30 51-82 2-31 (2740)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-50 Score=453.82 Aligned_cols=503 Identities=25% Similarity=0.235 Sum_probs=261.1
Q ss_pred ccccCCCccceeccccccccchhhhccccccccccccc-cccc------ccceeeeecCCceeecCCccccccccceeeE
Q psy11648 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ-GIFN------SKLRELEITGKDLKFIDPSAFDNIDACYDLT 74 (584)
Q Consensus 2 ~l~ls~~~~~~~~~~~~~~~l~~l~~Lr~L~l~~~~l~-~l~~------~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~ 74 (584)
.|||++|.+++..+.+ +..+++||+|++++|+++ .+|. ++|++|++++|.+.+..+. ..+ ++|+ +
T Consensus 73 ~L~L~~~~i~~~~~~~----~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l-~~L~-~ 144 (968)
T PLN00113 73 SIDLSGKNISGKISSA----IFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSI-PNLE-T 144 (968)
T ss_pred EEEecCCCccccCChH----HhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--ccc-CCCC-E
Confidence 4666666666655543 456666666677777665 3543 6677777777766554332 223 5666 7
Q ss_pred EEecCcccc-cccccccccccccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeecccccccc
Q psy11648 75 LKITNTQIE-ELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITD 153 (584)
Q Consensus 75 L~ls~n~i~-~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~ 153 (584)
|++++|.+. .+|..+.. ..+|+ +|++++|.+.+. +|..+.++++|++|++++|.+.+
T Consensus 145 L~Ls~n~~~~~~p~~~~~-l~~L~--~L~L~~n~l~~~-------------------~p~~~~~l~~L~~L~L~~n~l~~ 202 (968)
T PLN00113 145 LDLSNNMLSGEIPNDIGS-FSSLK--VLDLGGNVLVGK-------------------IPNSLTNLTSLEFLTLASNQLVG 202 (968)
T ss_pred EECcCCcccccCChHHhc-CCCCC--EEECccCccccc-------------------CChhhhhCcCCCeeeccCCCCcC
Confidence 777777665 44444333 33377 777777666543 33445555667777777766655
Q ss_pred ccccccchhhHHHHHhhcC-CCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCc
Q psy11648 154 LNGNLFRHLQKSIVKAKKN-NNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232 (584)
Q Consensus 154 ~~~~~~~~~~~~L~~L~l~-~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~ 232 (584)
..+..+.. .++|+.|+++ +......+..+. .+++|++|++++|.+.+..+..++++++|++|++++|.+.+. .+.
T Consensus 203 ~~p~~l~~-l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~p~ 278 (968)
T PLN00113 203 QIPRELGQ-MKSLKWIYLGYNNLSGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGP--IPP 278 (968)
T ss_pred cCChHHcC-cCCccEEECcCCccCCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeecc--Cch
Confidence 43332221 2334444444 222223333443 455555555555555554455555555555555555555443 444
Q ss_pred cccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcccCCCccccccccccc
Q psy11648 233 VFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312 (584)
Q Consensus 233 ~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~ 312 (584)
.+..+++|++|++++|.+. +.+|..+ ..+++|++|++++|.+++..+..+..+++|+.|++++|.+....+..+..
T Consensus 279 ~l~~l~~L~~L~Ls~n~l~-~~~p~~~--~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~- 354 (968)
T PLN00113 279 SIFSLQKLISLDLSDNSLS-GEIPELV--IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGK- 354 (968)
T ss_pred hHhhccCcCEEECcCCeec-cCCChhH--cCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhC-
Confidence 5555555555555555554 4444443 45555555555555555444445555555555555555554222222222
Q ss_pred ccCCccEEEcCCCcccccccccccCCCCCcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEE
Q psy11648 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392 (584)
Q Consensus 313 ~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 392 (584)
+++|+.|++++|.+.+..+..+..++.++.+++++|.+.+..+..+..+++|+.+++++|.+++..|..+..++.|+.+
T Consensus 355 -~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 433 (968)
T PLN00113 355 -HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFL 433 (968)
T ss_pred -CCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEE
Confidence 4555555555555555444445555555555555555555555555555555555555555555445555555555555
Q ss_pred ecCCCCCCCCChhhhcccccCCCCceEECCCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEcc
Q psy11648 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472 (584)
Q Consensus 393 ~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~ 472 (584)
++++|.+.+..+..+. ..+.|+.+++++|.+....+... ..++|+.|++++|++....+..+..+ ++|+.|+++
T Consensus 434 ~Ls~N~l~~~~~~~~~---~l~~L~~L~L~~n~~~~~~p~~~--~~~~L~~L~ls~n~l~~~~~~~~~~l-~~L~~L~Ls 507 (968)
T PLN00113 434 DISNNNLQGRINSRKW---DMPSLQMLSLARNKFFGGLPDSF--GSKRLENLDLSRNQFSGAVPRKLGSL-SELMQLKLS 507 (968)
T ss_pred ECcCCcccCccChhhc---cCCCCcEEECcCceeeeecCccc--ccccceEEECcCCccCCccChhhhhh-hccCEEECc
Confidence 5555555543332221 22344555555554443222211 12445555555555443333344444 455555555
Q ss_pred CCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCC
Q psy11648 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549 (584)
Q Consensus 473 ~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~ 549 (584)
+|++.+..+..+..+++|++|++++|.+++.+|..|..+++|+.|++++|++.+..|..+..+++|++|++++|++.
T Consensus 508 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~ 584 (968)
T PLN00113 508 ENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLH 584 (968)
T ss_pred CCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcce
Confidence 55554444444445555555555555555555555555555555555555555444444444555555555555444
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.7e-48 Score=436.83 Aligned_cols=504 Identities=20% Similarity=0.182 Sum_probs=410.0
Q ss_pred CccccCCCccceeccccccccchhhhcccccccccccccc-ccc---ccceeeeecCCceeecCCccccccccceeeEEE
Q psy11648 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQG-IFN---SKLRELEITGKDLKFIDPSAFDNIDACYDLTLK 76 (584)
Q Consensus 1 ~~l~ls~~~~~~~~~~~~~~~l~~l~~Lr~L~l~~~~l~~-l~~---~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ 76 (584)
+.|+|++|++++..+.++ +..+++||+|++++|.+++ +|. ++|++|++++|.+.+..+..+.++ ++|+ +|+
T Consensus 96 ~~L~Ls~n~~~~~ip~~~---~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l-~~L~-~L~ 170 (968)
T PLN00113 96 QTINLSNNQLSGPIPDDI---FTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSF-SSLK-VLD 170 (968)
T ss_pred CEEECCCCccCCcCChHH---hccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcC-CCCC-EEE
Confidence 578999999986555442 4478899999999999986 665 999999999999998888889888 8999 999
Q ss_pred ecCcccc-cccccccccccccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeecccccccccc
Q psy11648 77 ITNTQIE-ELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLN 155 (584)
Q Consensus 77 ls~n~i~-~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~ 155 (584)
+++|.+. .+|..+....+ |+ +|++++|.+.+..+..++.+ ++|++|++++|.+.+..
T Consensus 171 L~~n~l~~~~p~~~~~l~~-L~--~L~L~~n~l~~~~p~~l~~l-------------------~~L~~L~L~~n~l~~~~ 228 (968)
T PLN00113 171 LGGNVLVGKIPNSLTNLTS-LE--FLTLASNQLVGQIPRELGQM-------------------KSLKWIYLGYNNLSGEI 228 (968)
T ss_pred CccCcccccCChhhhhCcC-CC--eeeccCCCCcCcCChHHcCc-------------------CCccEEECcCCccCCcC
Confidence 9999987 56665555554 99 99999999887655555444 44555555544444433
Q ss_pred ccccchhhHHHHHhhcC-CCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCccc
Q psy11648 156 GNLFRHLQKSIVKAKKN-NNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVF 234 (584)
Q Consensus 156 ~~~~~~~~~~L~~L~l~-~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~ 234 (584)
+..+.. .++|++|+++ +......+..+. .+++|+.|++++|.+.+..+..+.++++|++|++++|.+.+. .+..+
T Consensus 229 p~~l~~-l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~--~p~~~ 304 (968)
T PLN00113 229 PYEIGG-LTSLNHLDLVYNNLTGPIPSSLG-NLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGE--IPELV 304 (968)
T ss_pred ChhHhc-CCCCCEEECcCceeccccChhHh-CCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccC--CChhH
Confidence 332221 2344444444 222333455665 789999999999999988888899999999999999998776 78889
Q ss_pred cccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcccCCCccccccccccccc
Q psy11648 235 DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314 (584)
Q Consensus 235 ~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~ 314 (584)
..+++|+.|++++|.+. +.+|..+ ..+++|++|++++|.+.+..+..+..+++|+.|++++|.+....+..+.. +
T Consensus 305 ~~l~~L~~L~l~~n~~~-~~~~~~~--~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~--~ 379 (968)
T PLN00113 305 IQLQNLEILHLFSNNFT-GKIPVAL--TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCS--S 379 (968)
T ss_pred cCCCCCcEEECCCCccC-CcCChhH--hcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhC--c
Confidence 99999999999999987 6777776 79999999999999999877778999999999999999988443333333 7
Q ss_pred CCccEEEcCCCcccccccccccCCCCCcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEEec
Q psy11648 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394 (584)
Q Consensus 315 ~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l 394 (584)
++|+.+++++|.+.+..+..+..+++|+.+++++|.+++..+..+..++.|+.+++++|.+.+..+..+..+++|+.|++
T Consensus 380 ~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 459 (968)
T PLN00113 380 GNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL 459 (968)
T ss_pred CCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEEC
Confidence 89999999999999888888999999999999999999888888999999999999999999988888889999999999
Q ss_pred CCCCCCCCChhhhcccccCCCCceEECCCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCC
Q psy11648 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474 (584)
Q Consensus 395 ~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n 474 (584)
++|.+.+..+..+ ....++.|++++|.+....+.. +..+++|+.|++++|.+....+..+..+ ++|++|++++|
T Consensus 460 ~~n~~~~~~p~~~----~~~~L~~L~ls~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N 533 (968)
T PLN00113 460 ARNKFFGGLPDSF----GSKRLENLDLSRNQFSGAVPRK-LGSLSELMQLKLSENKLSGEIPDELSSC-KKLVSLDLSHN 533 (968)
T ss_pred cCceeeeecCccc----ccccceEEECcCCccCCccChh-hhhhhccCEEECcCCcceeeCChHHcCc-cCCCEEECCCC
Confidence 9999877655443 3468899999999998655433 3357899999999999885555777787 99999999999
Q ss_pred cccccCccccCCCcccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCc
Q psy11648 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR 547 (584)
Q Consensus 475 ~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~ 547 (584)
.+.+..+..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+..|.. ..+..+....+.+|.
T Consensus 534 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~ 605 (968)
T PLN00113 534 QLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST-GAFLAINASAVAGNI 605 (968)
T ss_pred cccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc-chhcccChhhhcCCc
Confidence 999998999999999999999999999999999999999999999999999766643 223344445555663
No 3
>KOG4194|consensus
Probab=100.00 E-value=1.1e-38 Score=303.99 Aligned_cols=296 Identities=27% Similarity=0.413 Sum_probs=146.2
Q ss_pred ccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCccccccccceEEeecccccCCCCchhhHhhhcCCC
Q psy11648 187 LSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNT 266 (584)
Q Consensus 187 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~ 266 (584)
++.|+.||++.|.+..+....|..-.++++|++++|+++.. ....|..+.+|..|.++.|.++ .+|...| +++++
T Consensus 148 l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l--~~~~F~~lnsL~tlkLsrNrit--tLp~r~F-k~L~~ 222 (873)
T KOG4194|consen 148 LPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTL--ETGHFDSLNSLLTLKLSRNRIT--TLPQRSF-KRLPK 222 (873)
T ss_pred HhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccc--ccccccccchheeeecccCccc--ccCHHHh-hhcch
Confidence 34455555555555444444444444555555555555544 3344444445555555555443 4555544 45555
Q ss_pred CCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCcccccccccccCCCCCcEEEc
Q psy11648 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL 346 (584)
Q Consensus 267 L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l 346 (584)
|+.|++..|.+.......|..+++|+.|.+..|.+..+....|.. +.++++|++..|++..+..+++.++..|+.|++
T Consensus 223 L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~--l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~l 300 (873)
T KOG4194|consen 223 LESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYG--LEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDL 300 (873)
T ss_pred hhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceee--ecccceeecccchhhhhhcccccccchhhhhcc
Confidence 555555555555443335555556666666555555555544443 444444444444444444444444444444444
Q ss_pred cCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCCcc
Q psy11648 347 SYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426 (584)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l 426 (584)
++|.|..+..+.+..+++|+.|++++|.++...++.+..+..|++|.++.|.+.......|..
T Consensus 301 S~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~----------------- 363 (873)
T KOG4194|consen 301 SYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVG----------------- 363 (873)
T ss_pred chhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHH-----------------
Confidence 444444444444444444444444444444444444444444444444444444333333322
Q ss_pred ccccccccccccCcccEEEccCCCCC---CCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccccc
Q psy11648 427 TNLYENDKKQAPIYIKSLDLSNNRIQ---EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503 (584)
Q Consensus 427 ~~~~~~~~~~~~~~L~~L~l~~~~l~---~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~ 503 (584)
.++|++|+++.|.+. +-....|.++ ++|++|++.+|++..++..+|.++++|++||+.+|.|..+
T Consensus 364 -----------lssL~~LdLr~N~ls~~IEDaa~~f~gl-~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSI 431 (873)
T KOG4194|consen 364 -----------LSSLHKLDLRSNELSWCIEDAAVAFNGL-PSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASI 431 (873)
T ss_pred -----------hhhhhhhcCcCCeEEEEEecchhhhccc-hhhhheeecCceeeecchhhhccCcccceecCCCCcceee
Confidence 244444444444432 1112334454 5555555555555555555555555555555555555555
Q ss_pred cccccCCCCCccEEEC
Q psy11648 504 VKRTFIGMPNLQIIDL 519 (584)
Q Consensus 504 ~~~~~~~~~~L~~L~l 519 (584)
.+.+|+.+ .|++|.+
T Consensus 432 q~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 432 QPNAFEPM-ELKELVM 446 (873)
T ss_pred cccccccc-hhhhhhh
Confidence 55555555 5555544
No 4
>KOG4194|consensus
Probab=100.00 E-value=9.3e-38 Score=297.69 Aligned_cols=401 Identities=25% Similarity=0.330 Sum_probs=326.8
Q ss_pred ccceeeccccccccccccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEc
Q psy11648 140 NLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSL 219 (584)
Q Consensus 140 ~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l 219 (584)
+-+.|+.+++.+..+..+.+.++. .+.-+.|++++|.+..+....|.++++|+++++
T Consensus 53 ~~~lldcs~~~lea~~~~~l~g~l-----------------------p~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l 109 (873)
T KOG4194|consen 53 NTRLLDCSDRELEAIDKSRLKGFL-----------------------PSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNL 109 (873)
T ss_pred CceeeecCccccccccccccCCcC-----------------------ccceeeeeccccccccCcHHHHhcCCcceeeee
Confidence 356778888877776544333221 245677999999998888888899999999999
Q ss_pred CCCccceeecCCccccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcccC
Q psy11648 220 SFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299 (584)
Q Consensus 220 ~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~ 299 (584)
..|.++.+ |.......+|++|++.+|.+. ++...-+ +.++.|+.||++.|.++.++...+..-.++++|++++|
T Consensus 110 ~~N~Lt~I---P~f~~~sghl~~L~L~~N~I~--sv~se~L-~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N 183 (873)
T KOG4194|consen 110 NKNELTRI---PRFGHESGHLEKLDLRHNLIS--SVTSEEL-SALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASN 183 (873)
T ss_pred ccchhhhc---ccccccccceeEEeeeccccc--cccHHHH-HhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccc
Confidence 99888764 655555667999999999886 5554444 78889999999999999888878877788999999999
Q ss_pred CCcccccccccccccCCccEEEcCCCcccccccccccCCCCCcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccC
Q psy11648 300 KISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379 (584)
Q Consensus 300 ~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 379 (584)
+|+.+....|.. +.+|.+|.++.|+++..+...|.++++|+.|++..|.|.-+....|.++++|+.+.+..|.+...-
T Consensus 184 ~It~l~~~~F~~--lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~ 261 (873)
T KOG4194|consen 184 RITTLETGHFDS--LNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLD 261 (873)
T ss_pred cccccccccccc--cchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCccccc
Confidence 999888888876 789999999999999988888888999999999999887665567888899999999999988887
Q ss_pred CccCCCCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCCccccccccccccccCcccEEEccCCCCCCCChhhH
Q psy11648 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFL 459 (584)
Q Consensus 380 ~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~ 459 (584)
..+|..+.++++|++..|.+..+..+++.++ ..|+.|+++.|.|..+....+.. +++|++|+++.|+++.+++..|
T Consensus 262 DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgL---t~L~~L~lS~NaI~rih~d~Wsf-tqkL~~LdLs~N~i~~l~~~sf 337 (873)
T KOG4194|consen 262 DGAFYGLEKMEHLNLETNRLQAVNEGWLFGL---TSLEQLDLSYNAIQRIHIDSWSF-TQKLKELDLSSNRITRLDEGSF 337 (873)
T ss_pred Ccceeeecccceeecccchhhhhhccccccc---chhhhhccchhhhheeecchhhh-cccceeEeccccccccCChhHH
Confidence 7888899999999999999888777766554 57888899999888877665543 7899999999999999999999
Q ss_pred HHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCccccccc---ccccCCCCCccEEECCCCCCCCcCcccccCCC
Q psy11648 460 QTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV---KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536 (584)
Q Consensus 460 ~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~---~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~ 536 (584)
..+ .+|++|.|+.|.+..+...+|.++++|++||+++|.+...+ ...|.++++|+.|++-+|++..++..+|.+++
T Consensus 338 ~~L-~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~ 416 (873)
T KOG4194|consen 338 RVL-SQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLE 416 (873)
T ss_pred HHH-HHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCc
Confidence 988 99999999999998888888999999999999999876643 34588899999999999999999999999999
Q ss_pred CccEEEcCCCcCCccCccccCCCCcceEECC------CCCCCCCCC
Q psy11648 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDIS------YNQDKIRPG 576 (584)
Q Consensus 537 ~L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~------~n~l~~~p~ 576 (584)
.|++|+|.+|.|.+|-...|.-..|++|.+. +|++..+++
T Consensus 417 ~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql~Wl~q 462 (873)
T KOG4194|consen 417 ALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQLKWLAQ 462 (873)
T ss_pred ccceecCCCCcceeecccccccchhhhhhhcccceEEeccHHHHHH
Confidence 9999999999888776655555588877653 455554443
No 5
>KOG0472|consensus
Probab=100.00 E-value=1e-39 Score=297.76 Aligned_cols=494 Identities=24% Similarity=0.284 Sum_probs=364.2
Q ss_pred cccccccccccccc------------------ccceeeeecCCceeecCCccccccccceeeEEEecCcccccccccccc
Q psy11648 30 TTILKGDQLQGIFN------------------SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFD 91 (584)
Q Consensus 30 ~L~l~~~~l~~l~~------------------~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~~l~~~~~~ 91 (584)
.+++|++.+.++|. ..+..++++.|.+..... .+.++ ..+. ++++++|++..+|.++..
T Consensus 13 ~lnlsnr~l~~vp~~vyq~~~t~~e~e~wW~qv~l~~lils~N~l~~l~~-dl~nL-~~l~-vl~~~~n~l~~lp~aig~ 89 (565)
T KOG0472|consen 13 SLNLSNRSLKDVPTEVYQINLTTGEGENWWEQVDLQKLILSHNDLEVLRE-DLKNL-ACLT-VLNVHDNKLSQLPAAIGE 89 (565)
T ss_pred ccccccchhhhccHHHHHHHhhccchhhhhhhcchhhhhhccCchhhccH-hhhcc-ccee-EEEeccchhhhCCHHHHH
Confidence 44777777776664 567777788777666433 34555 5677 888888888888888877
Q ss_pred cccccceeeeecCCCceeeechhhhccchhccc----ccCceeccchhhcCCccceeeccccccccccccccchhhHHHH
Q psy11648 92 KIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQ----HLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIV 167 (584)
Q Consensus 92 ~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~----~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~ 167 (584)
... ++ .++.++|++.....+ ++....+.. .|.+..+|+.++.+..+..++..+|+++..
T Consensus 90 l~~-l~--~l~vs~n~ls~lp~~-i~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~~~N~i~sl------------- 152 (565)
T KOG0472|consen 90 LEA-LK--SLNVSHNKLSELPEQ-IGSLISLVKLDCSSNELKELPDSIGRLLDLEDLDATNNQISSL------------- 152 (565)
T ss_pred HHH-HH--HhhcccchHhhccHH-HhhhhhhhhhhccccceeecCchHHHHhhhhhhhccccccccC-------------
Confidence 777 77 788888877654332 333322221 455555555555555666666666655555
Q ss_pred HhhcCCCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCccccccccceEEeecc
Q psy11648 168 KAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISF 247 (584)
Q Consensus 168 ~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~ 247 (584)
|.++. ++.++..+++.++.+...++..+. |+.|+++|...|-+.. .|..++.+.+|+.|++..
T Consensus 153 ------------p~~~~-~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~t---lP~~lg~l~~L~~LyL~~ 215 (565)
T KOG0472|consen 153 ------------PEDMV-NLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLET---LPPELGGLESLELLYLRR 215 (565)
T ss_pred ------------chHHH-HHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhc---CChhhcchhhhHHHHhhh
Confidence 44444 678888889999998888887666 8899999998887765 488889999999999999
Q ss_pred cccCCCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCcc
Q psy11648 248 SLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327 (584)
Q Consensus 248 ~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~ 327 (584)
|.+. .+|+. .+|..|.++.++.|.+..++.+...+++++.+||+++|+++++|..+.. +.+|+.|++++|.+
T Consensus 216 Nki~--~lPef---~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~cl---LrsL~rLDlSNN~i 287 (565)
T KOG0472|consen 216 NKIR--FLPEF---PGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEICL---LRSLERLDLSNNDI 287 (565)
T ss_pred cccc--cCCCC---CccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchHHHH---hhhhhhhcccCCcc
Confidence 9885 77733 7899999999999999888887777999999999999999999988776 78899999999999
Q ss_pred cccccccccCCCCCcEEEccCCcCCCcChhhhcc-----CcCCCE----EeccCC---C-CCcc-CC---ccCCCCCCCc
Q psy11648 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKN-----LNNMLN----IVLSFN---Q-IKYI-YP---NAFVNLPNLV 390 (584)
Q Consensus 328 ~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~-----~~~L~~----L~l~~~---~-~~~~-~~---~~~~~~~~L~ 390 (584)
+.. +..++++ .|+.|.+.||++..+....+.. ++.|+. =.++.. . -+.. .+ .......+.+
T Consensus 288 s~L-p~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tk 365 (565)
T KOG0472|consen 288 SSL-PYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTK 365 (565)
T ss_pred ccC-Ccccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhh
Confidence 987 4568888 8999999999875432111110 001111 011111 0 0000 11 1223456788
Q ss_pred EEecCCCCCCCCChhhhcccccCCCCceEECCCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEE
Q psy11648 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470 (584)
Q Consensus 391 ~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~ 470 (584)
.|++++-+++.++.++|... ...-+...++++|++..+|...... -.-++.+.++.|.+..+| ..++.+ ++|..|+
T Consensus 366 iL~~s~~qlt~VPdEVfea~-~~~~Vt~VnfskNqL~elPk~L~~l-kelvT~l~lsnn~isfv~-~~l~~l-~kLt~L~ 441 (565)
T KOG0472|consen 366 ILDVSDKQLTLVPDEVFEAA-KSEIVTSVNFSKNQLCELPKRLVEL-KELVTDLVLSNNKISFVP-LELSQL-QKLTFLD 441 (565)
T ss_pred hhcccccccccCCHHHHHHh-hhcceEEEecccchHhhhhhhhHHH-HHHHHHHHhhcCccccch-HHHHhh-hcceeee
Confidence 99999999999998888765 3344678899999998887654321 112334566777666555 667777 9999999
Q ss_pred ccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCc
Q psy11648 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550 (584)
Q Consensus 471 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~ 550 (584)
+++|.+.+++. .++.+..|+.+++++|.|. .+|.+......++.+-.++|++..++++.+.++..|..|++.+|.+++
T Consensus 442 L~NN~Ln~LP~-e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~ 519 (565)
T KOG0472|consen 442 LSNNLLNDLPE-EMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQ 519 (565)
T ss_pred cccchhhhcch-hhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhh
Confidence 99998887765 4567888999999999886 567777888888888889999999999989999999999999999999
Q ss_pred cCccccCCCCcceEECCCCCCCCCCC
Q psy11648 551 LPRDVFSNTIIEKLDISYNQDKIRPG 576 (584)
Q Consensus 551 lp~~l~~~~~L~~l~l~~n~l~~~p~ 576 (584)
+|..++.|++|++|++.||++...++
T Consensus 520 IPp~LgnmtnL~hLeL~gNpfr~Pr~ 545 (565)
T KOG0472|consen 520 IPPILGNMTNLRHLELDGNPFRQPRH 545 (565)
T ss_pred CChhhccccceeEEEecCCccCCCHH
Confidence 99999999999999999999995444
No 6
>KOG0472|consensus
Probab=100.00 E-value=1.6e-37 Score=283.33 Aligned_cols=482 Identities=24% Similarity=0.270 Sum_probs=303.0
Q ss_pred cccccccccccccc-----ccceeeeecCCceeecCCccccccccceeeEEEecCcccccccccccccccccceeeeecC
Q psy11648 30 TTILKGDQLQGIFN-----SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104 (584)
Q Consensus 30 ~L~l~~~~l~~l~~-----~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~~l~~~~~~~~~~L~~~~L~ls 104 (584)
.+++++|.++.+.. .-+.+++++.|++...++ ++..+ ..++ .++.++|++..+|+.+..... +. +++.+
T Consensus 49 ~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l~~lp~-aig~l-~~l~-~l~vs~n~ls~lp~~i~s~~~-l~--~l~~s 122 (565)
T KOG0472|consen 49 KLILSHNDLEVLREDLKNLACLTVLNVHDNKLSQLPA-AIGEL-EALK-SLNVSHNKLSELPEQIGSLIS-LV--KLDCS 122 (565)
T ss_pred hhhhccCchhhccHhhhcccceeEEEeccchhhhCCH-HHHHH-HHHH-HhhcccchHhhccHHHhhhhh-hh--hhhcc
Confidence 33555555555433 455555666665555332 33333 4455 566666666666666666666 66 66666
Q ss_pred CCceeeechhhhccchhccc----ccCceeccchhhcCCccceeeccccccccccccccchhhHHHHHhhcCCCCCCccc
Q psy11648 105 HNKLSVLNMATLYSNVTKLQ----HLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQV 180 (584)
Q Consensus 105 ~~~l~~~~~~~~~~~~~l~~----~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 180 (584)
+|.+....+ .++.+..+.. +|++.++|+++..+.++..+++.+|.+...++...+ .+.|+++|.....-...|
T Consensus 123 ~n~~~el~~-~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~--m~~L~~ld~~~N~L~tlP 199 (565)
T KOG0472|consen 123 SNELKELPD-SIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIA--MKRLKHLDCNSNLLETLP 199 (565)
T ss_pred ccceeecCc-hHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHH--HHHHHhcccchhhhhcCC
Confidence 666554433 2443333322 566667788888888888888888888888776555 566777777744444445
Q ss_pred chhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCccccccccceEEeecccccCCCCchhhHh
Q psy11648 181 SDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYIL 260 (584)
Q Consensus 181 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~ 260 (584)
..++ .+..|+.|+++.|.+...+ .|.+|..|+++.++.|.+... .....++++++..|++.+|++. ++|..+
T Consensus 200 ~~lg-~l~~L~~LyL~~Nki~~lP--ef~gcs~L~Elh~g~N~i~~l--pae~~~~L~~l~vLDLRdNklk--e~Pde~- 271 (565)
T KOG0472|consen 200 PELG-GLESLELLYLRRNKIRFLP--EFPGCSLLKELHVGENQIEML--PAEHLKHLNSLLVLDLRDNKLK--EVPDEI- 271 (565)
T ss_pred hhhc-chhhhHHHHhhhcccccCC--CCCccHHHHHHHhcccHHHhh--HHHHhcccccceeeeccccccc--cCchHH-
Confidence 5665 6788888888888887665 488888888888888887665 3345557888888888888884 788877
Q ss_pred hhcCCCCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCcccccccccccCCCC
Q psy11648 261 NKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE 340 (584)
Q Consensus 261 ~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~ 340 (584)
..+.+|++||+++|.+++.+. .++++ .|+.|.+.||.+..+-..+...+.-.-|++|.= .++ .+.++.-..
T Consensus 272 -clLrsL~rLDlSNN~is~Lp~-sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs---~~~---~dglS~se~ 342 (565)
T KOG0472|consen 272 -CLLRSLERLDLSNNDISSLPY-SLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRS---KIK---DDGLSQSEG 342 (565)
T ss_pred -HHhhhhhhhcccCCccccCCc-ccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHH---hhc---cCCCCCCcc
Confidence 477888888998888888876 78888 888888888887765554443221112222210 000 000000000
Q ss_pred CcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCC--CCCcEEecCCCCCCCCChhhhcccccCCCC-c
Q psy11648 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL--PNLVKLDLQDNKLKDFNLNVFSNITSKQTP-M 417 (584)
Q Consensus 341 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~--~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l-~ 417 (584)
=+.-. .....+..+. .......+.|++++-.++.++.+.|..- .-...+++++|++...+.+... ...+ .
T Consensus 343 ~~e~~--~t~~~~~~~~-~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~----lkelvT 415 (565)
T KOG0472|consen 343 GTETA--MTLPSESFPD-IYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVE----LKELVT 415 (565)
T ss_pred ccccc--CCCCCCcccc-hhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHH----HHHHHH
Confidence 00000 0000111111 1223456667777767776644444322 2356777777777665543211 1111 2
Q ss_pred eEECCCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccC
Q psy11648 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497 (584)
Q Consensus 418 ~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 497 (584)
.+.++.|.+...+... +.++++..|++++|-+.++|.+.+.- ..|+.|++++|.+...+ ..+.....++.+-.++
T Consensus 416 ~l~lsnn~isfv~~~l--~~l~kLt~L~L~NN~Ln~LP~e~~~l--v~Lq~LnlS~NrFr~lP-~~~y~lq~lEtllas~ 490 (565)
T KOG0472|consen 416 DLVLSNNKISFVPLEL--SQLQKLTFLDLSNNLLNDLPEEMGSL--VRLQTLNLSFNRFRMLP-ECLYELQTLETLLASN 490 (565)
T ss_pred HHHhhcCccccchHHH--Hhhhcceeeecccchhhhcchhhhhh--hhhheecccccccccch-HHHhhHHHHHHHHhcc
Confidence 3444555554443322 23678888888888888888665543 56889999988776553 3334455566677777
Q ss_pred cccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCc
Q psy11648 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550 (584)
Q Consensus 498 n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~ 550 (584)
|++....+..+.++.+|..||+.+|.+..++|. +++|++|++|.++||.++.
T Consensus 491 nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~-LgnmtnL~hLeL~gNpfr~ 542 (565)
T KOG0472|consen 491 NQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI-LGNMTNLRHLELDGNPFRQ 542 (565)
T ss_pred ccccccChHHhhhhhhcceeccCCCchhhCChh-hccccceeEEEecCCccCC
Confidence 888777776788889999999999988888765 7889999999999998883
No 7
>KOG0618|consensus
Probab=99.97 E-value=2.5e-33 Score=281.56 Aligned_cols=487 Identities=21% Similarity=0.290 Sum_probs=303.6
Q ss_pred ccccCCCccceeccccccccchhhhccccccccccccccccc------ccceeeeecCCceeecCCccccccccceeeEE
Q psy11648 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFN------SKLRELEITGKDLKFIDPSAFDNIDACYDLTL 75 (584)
Q Consensus 2 ~l~ls~~~~~~~~~~~~~~~l~~l~~Lr~L~l~~~~l~~l~~------~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L 75 (584)
.+|+|..++.-++..-+ .-..+.+|+++.|-+-+.|- .+|+.||++.|.+.. ++..+..+ ++|+ .+
T Consensus 2 ~vd~s~~~l~~ip~~i~-----~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~~-fp~~it~l-~~L~-~l 73 (1081)
T KOG0618|consen 2 HVDASDEQLELIPEQIL-----NNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQISS-FPIQITLL-SHLR-QL 73 (1081)
T ss_pred CcccccccCcccchhhc-----cHHHHHhhhccccccccCchHHhhheeeeEEeecccccccc-CCchhhhH-HHHh-hc
Confidence 46777777777777632 22226666888776666433 457777888777766 45556666 6777 78
Q ss_pred EecCcccccccccccccccccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeecccccccccc
Q psy11648 76 KITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLN 155 (584)
Q Consensus 76 ~ls~n~i~~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~ 155 (584)
.++.|.|..+|.++..... |+ +++|.+|.+. .+|..+..+++|++|++++|.+...+
T Consensus 74 n~s~n~i~~vp~s~~~~~~-l~--~lnL~~n~l~--------------------~lP~~~~~lknl~~LdlS~N~f~~~P 130 (1081)
T KOG0618|consen 74 NLSRNYIRSVPSSCSNMRN-LQ--YLNLKNNRLQ--------------------SLPASISELKNLQYLDLSFNHFGPIP 130 (1081)
T ss_pred ccchhhHhhCchhhhhhhc-ch--hheeccchhh--------------------cCchhHHhhhcccccccchhccCCCc
Confidence 8888877777765555555 77 7777777553 55677888899999999999877764
Q ss_pred ccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCcccc
Q psy11648 156 GNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFD 235 (584)
Q Consensus 156 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~ 235 (584)
. .+. .+..++.+..++|..... ++... ++.+++..+.+.+. +.....
T Consensus 131 l-------------------------~i~-~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~--~~~~i~ 177 (1081)
T KOG0618|consen 131 L-------------------------VIE-VLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGS--FLIDIY 177 (1081)
T ss_pred h-------------------------hHH-hhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccc--hhcchh
Confidence 3 222 344555555555511111 11111 55555555544332 222333
Q ss_pred ccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccC
Q psy11648 236 VFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315 (584)
Q Consensus 236 ~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~ 315 (584)
.+.+ .|++.+|.+. .+ .. ..+.+|+.+....|.+..+.. .-++++.|+.+.|.+....... ...
T Consensus 178 ~l~~--~ldLr~N~~~--~~---dl-s~~~~l~~l~c~rn~ls~l~~----~g~~l~~L~a~~n~l~~~~~~p----~p~ 241 (1081)
T KOG0618|consen 178 NLTH--QLDLRYNEME--VL---DL-SNLANLEVLHCERNQLSELEI----SGPSLTALYADHNPLTTLDVHP----VPL 241 (1081)
T ss_pred hhhe--eeecccchhh--hh---hh-hhccchhhhhhhhcccceEEe----cCcchheeeeccCcceeecccc----ccc
Confidence 3322 3666665442 11 11 355566666666665554321 1345666666666665332221 145
Q ss_pred CccEEEcCCCcccccccccccCCCCCcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEEecC
Q psy11648 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395 (584)
Q Consensus 316 ~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 395 (584)
+|+.++++.+.++..+ .++..|.+|+.+....|.++.. +..+...++|+.+....|.+..+ |......++|++|++.
T Consensus 242 nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~~l-p~ri~~~~~L~~l~~~~nel~yi-p~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 242 NLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLVAL-PLRISRITSLVSLSAAYNELEYI-PPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred cceeeecchhhhhcch-HHHHhcccceEecccchhHHhh-HHHHhhhhhHHHHHhhhhhhhhC-CCcccccceeeeeeeh
Confidence 6667777777766664 6666777777777777776443 44445566777777777777666 4455567777777777
Q ss_pred CCCCCCCChhhhcccccCCCCceEECCCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCc
Q psy11648 396 DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475 (584)
Q Consensus 396 ~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~ 475 (584)
.|.+...+...+... ...++.+..+.+++...+... ....+.|+.|++.+|.+++-....+.++ .+|+.|+|++|+
T Consensus 319 ~N~L~~lp~~~l~v~--~~~l~~ln~s~n~l~~lp~~~-e~~~~~Lq~LylanN~Ltd~c~p~l~~~-~hLKVLhLsyNr 394 (1081)
T KOG0618|consen 319 SNNLPSLPDNFLAVL--NASLNTLNVSSNKLSTLPSYE-ENNHAALQELYLANNHLTDSCFPVLVNF-KHLKVLHLSYNR 394 (1081)
T ss_pred hccccccchHHHhhh--hHHHHHHhhhhcccccccccc-chhhHHHHHHHHhcCcccccchhhhccc-cceeeeeecccc
Confidence 777776665444332 223455666666665554222 2235677778888887775444456666 778888888888
Q ss_pred ccccCccccCCCcccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCC--ccCc
Q psy11648 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR--SLPR 553 (584)
Q Consensus 476 l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~--~lp~ 553 (584)
+...+...+.++..|++|++++|.++.+ |+....++.|++|...+|++...| .+..++.|+.+|++.|.|+ .+|+
T Consensus 395 L~~fpas~~~kle~LeeL~LSGNkL~~L-p~tva~~~~L~tL~ahsN~l~~fP--e~~~l~qL~~lDlS~N~L~~~~l~~ 471 (1081)
T KOG0618|consen 395 LNSFPASKLRKLEELEELNLSGNKLTTL-PDTVANLGRLHTLRAHSNQLLSFP--ELAQLPQLKVLDLSCNNLSEVTLPE 471 (1081)
T ss_pred cccCCHHHHhchHHhHHHhcccchhhhh-hHHHHhhhhhHHHhhcCCceeech--hhhhcCcceEEecccchhhhhhhhh
Confidence 8777777777888888888888887744 467777888888888888877765 3667788888888888777 3443
Q ss_pred cccCCCCcceEECCCCCCCCCCCCCC
Q psy11648 554 DVFSNTIIEKLDISYNQDKIRPGRES 579 (584)
Q Consensus 554 ~l~~~~~L~~l~l~~n~l~~~p~~~~ 579 (584)
..-+ +.|+.||++||.-..+.++.|
T Consensus 472 ~~p~-p~LkyLdlSGN~~l~~d~~~l 496 (1081)
T KOG0618|consen 472 ALPS-PNLKYLDLSGNTRLVFDHKTL 496 (1081)
T ss_pred hCCC-cccceeeccCCcccccchhhh
Confidence 3332 788888888887555544444
No 8
>KOG0618|consensus
Probab=99.96 E-value=1e-32 Score=277.15 Aligned_cols=459 Identities=21% Similarity=0.251 Sum_probs=366.9
Q ss_pred cccccccccccccc-----ccceeeeecCCceeecCCccccccccceeeEEEecCcccccccccccccccccceeeeecC
Q psy11648 30 TTILKGDQLQGIFN-----SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104 (584)
Q Consensus 30 ~L~l~~~~l~~l~~-----~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~~l~~~~~~~~~~L~~~~L~ls 104 (584)
++|.+..+++-||. ..+..|+++.|-+-.-+-+.+.+. -+|+ .||+++|.+...|..+....+ |+ .|+++
T Consensus 2 ~vd~s~~~l~~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~-v~L~-~l~lsnn~~~~fp~~it~l~~-L~--~ln~s 76 (1081)
T KOG0618|consen 2 HVDASDEQLELIPEQILNNEALQILNLRRNSLLSRPLEFVEKR-VKLK-SLDLSNNQISSFPIQITLLSH-LR--QLNLS 76 (1081)
T ss_pred CcccccccCcccchhhccHHHHHhhhccccccccCchHHhhhe-eeeE-EeeccccccccCCchhhhHHH-Hh--hcccc
Confidence 35888888998887 558888999887665444444444 5699 999999999999999999888 99 99999
Q ss_pred CCceeeechhhhccchhcccccCceeccchhhcCCccceeeccccccccccccccchhhHHHHHhhcCCCCCCcccchhH
Q psy11648 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDRE 184 (584)
Q Consensus 105 ~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 184 (584)
.|.|..+ |....++++|+++.+.+|.++.. |..+.
T Consensus 77 ~n~i~~v--------------------p~s~~~~~~l~~lnL~~n~l~~l-------------------------P~~~~ 111 (1081)
T KOG0618|consen 77 RNYIRSV--------------------PSSCSNMRNLQYLNLKNNRLQSL-------------------------PASIS 111 (1081)
T ss_pred hhhHhhC--------------------chhhhhhhcchhheeccchhhcC-------------------------chhHH
Confidence 9987643 44466778999999999987776 44555
Q ss_pred hhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCc-cceeecCCccccccccceEEeecccccCCCCchhhHhhhc
Q psy11648 185 KLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNK-LQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKN 263 (584)
Q Consensus 185 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~ 263 (584)
.+.+|+.|+++.|.+...+. .+..+..+..+..++|. +.. ++.. ..+.+++..+.+. +.++..+ ..
T Consensus 112 -~lknl~~LdlS~N~f~~~Pl-~i~~lt~~~~~~~s~N~~~~~-------lg~~-~ik~~~l~~n~l~-~~~~~~i--~~ 178 (1081)
T KOG0618|consen 112 -ELKNLQYLDLSFNHFGPIPL-VIEVLTAEEELAASNNEKIQR-------LGQT-SIKKLDLRLNVLG-GSFLIDI--YN 178 (1081)
T ss_pred -hhhcccccccchhccCCCch-hHHhhhHHHHHhhhcchhhhh-------hccc-cchhhhhhhhhcc-cchhcch--hh
Confidence 78999999999999987755 67888899999999982 222 2222 2777788877776 6666554 34
Q ss_pred CCCCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCcccccccccccCCCCCcE
Q psy11648 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343 (584)
Q Consensus 264 ~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~ 343 (584)
++. .+++.+|.++.. .+..+++|+++....|++..+... -++++.|+.+.|.++..... ....++++
T Consensus 179 l~~--~ldLr~N~~~~~---dls~~~~l~~l~c~rn~ls~l~~~------g~~l~~L~a~~n~l~~~~~~--p~p~nl~~ 245 (1081)
T KOG0618|consen 179 LTH--QLDLRYNEMEVL---DLSNLANLEVLHCERNQLSELEIS------GPSLTALYADHNPLTTLDVH--PVPLNLQY 245 (1081)
T ss_pred hhe--eeecccchhhhh---hhhhccchhhhhhhhcccceEEec------CcchheeeeccCcceeeccc--ccccccee
Confidence 443 599999998822 577889999999999988766543 68899999999999854332 23468999
Q ss_pred EEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCC
Q psy11648 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423 (584)
Q Consensus 344 L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~ 423 (584)
++++.+.+.+.. .+...+.+|+.+....|.++.. |..+....+|+.+....|.+.++++.. .+...+++|++..
T Consensus 246 ~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~~l-p~ri~~~~~L~~l~~~~nel~yip~~l----e~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 246 LDISHNNLSNLP-EWIGACANLEALNANHNRLVAL-PLRISRITSLVSLSAAYNELEYIPPFL----EGLKSLRTLDLQS 319 (1081)
T ss_pred eecchhhhhcch-HHHHhcccceEecccchhHHhh-HHHHhhhhhHHHHHhhhhhhhhCCCcc----cccceeeeeeehh
Confidence 999999999885 8999999999999999999766 666777899999999999988876532 2356789999999
Q ss_pred CccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccccc
Q psy11648 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503 (584)
Q Consensus 424 ~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~ 503 (584)
|++...++.+...-..+++.+..+.+.+...|.-.-..+ +.|+.|++.+|.+++.....+.+++.|+.|+|++|.+...
T Consensus 320 N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~-~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 320 NNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNH-AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred ccccccchHHHhhhhHHHHHHhhhhccccccccccchhh-HHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 999998885554434457788888888776663222333 7789999999999987777888999999999999999877
Q ss_pred cccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCccCccccCCCCcceEECCCCCCCC
Q psy11648 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKI 573 (584)
Q Consensus 504 ~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~~n~l~~ 573 (584)
....+.++..|++|++|+|+++.++ .....+..|+.|...+|++..+| ++..+++|+.+|++.|+++.
T Consensus 399 pas~~~kle~LeeL~LSGNkL~~Lp-~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLTTLP-DTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhhhhh-HHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchhhh
Confidence 7777889999999999999999886 66788999999999999999999 88889999999999999983
No 9
>KOG0444|consensus
Probab=99.96 E-value=6.1e-31 Score=253.28 Aligned_cols=373 Identities=24% Similarity=0.316 Sum_probs=268.7
Q ss_pred CCccceeeccccccccccccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEE
Q psy11648 138 LSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQEL 217 (584)
Q Consensus 138 ~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 217 (584)
++-.+-.|+++|.+++.- .|..+. .++.++.|.+....+...+ +.++.+.+|++|
T Consensus 6 LpFVrGvDfsgNDFsg~~-----------------------FP~~v~-qMt~~~WLkLnrt~L~~vP-eEL~~lqkLEHL 60 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDR-----------------------FPHDVE-QMTQMTWLKLNRTKLEQVP-EELSRLQKLEHL 60 (1255)
T ss_pred cceeecccccCCcCCCCc-----------------------CchhHH-HhhheeEEEechhhhhhCh-HHHHHHhhhhhh
Confidence 455777888888777541 355665 7899999999999887764 578899999999
Q ss_pred EcCCCccceeecCCccccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcc
Q psy11648 218 SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLE 297 (584)
Q Consensus 218 ~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~ 297 (584)
.+++|++..+ -..+..++.|+.+.+.+|.+....+|..+| .+..|+.||+++|++...|. .+..-.++-+|+++
T Consensus 61 s~~HN~L~~v---hGELs~Lp~LRsv~~R~N~LKnsGiP~diF--~l~dLt~lDLShNqL~EvP~-~LE~AKn~iVLNLS 134 (1255)
T KOG0444|consen 61 SMAHNQLISV---HGELSDLPRLRSVIVRDNNLKNSGIPTDIF--RLKDLTILDLSHNQLREVPT-NLEYAKNSIVLNLS 134 (1255)
T ss_pred hhhhhhhHhh---hhhhccchhhHHHhhhccccccCCCCchhc--ccccceeeecchhhhhhcch-hhhhhcCcEEEEcc
Confidence 9999998765 467888999999999999887678999997 99999999999999998876 68888899999999
Q ss_pred cCCCcccccccccccccCCccEEEcCCCcccccccccccCCCCCcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCC-
Q psy11648 298 YNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK- 376 (584)
Q Consensus 298 ~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~- 376 (584)
+|.|..||...|.. +.-|-.|++++|.+...+| .+..+..|+.|.+++|++.......+..+++|+.|.+++..-+
T Consensus 135 ~N~IetIPn~lfin--LtDLLfLDLS~NrLe~LPP-Q~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl 211 (1255)
T KOG0444|consen 135 YNNIETIPNSLFIN--LTDLLFLDLSNNRLEMLPP-QIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTL 211 (1255)
T ss_pred cCccccCCchHHHh--hHhHhhhccccchhhhcCH-HHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchh
Confidence 99999999998877 8889999999999988755 4788899999999999988776666777888888888876532
Q ss_pred ccCCccCCCCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCCccccccccccccccCcccEEEccCCCCCCCCh
Q psy11648 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456 (584)
Q Consensus 377 ~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~ 456 (584)
.-+|..+..+.+|..+|++.|.+...+.- +.. ..+|+.|++++|.++.+...... ..++++|+++.|+++.+|
T Consensus 212 ~N~Ptsld~l~NL~dvDlS~N~Lp~vPec-ly~---l~~LrrLNLS~N~iteL~~~~~~--W~~lEtLNlSrNQLt~LP- 284 (1255)
T KOG0444|consen 212 DNIPTSLDDLHNLRDVDLSENNLPIVPEC-LYK---LRNLRRLNLSGNKITELNMTEGE--WENLETLNLSRNQLTVLP- 284 (1255)
T ss_pred hcCCCchhhhhhhhhccccccCCCcchHH-Hhh---hhhhheeccCcCceeeeeccHHH--Hhhhhhhccccchhccch-
Confidence 34577888889999999999987765432 222 23445555555555443332222 234445555555554444
Q ss_pred hhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCccccc-ccccccCCCCCccEEECCCCCCCCcCcccccCC
Q psy11648 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV-VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535 (584)
Q Consensus 457 ~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~ 535 (584)
+ ++..++.|+.|.+.+|+++- -+|..++.+.+|+.+..++|.+. ..|+.++.|
T Consensus 285 ~-------------------------avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC 338 (1255)
T KOG0444|consen 285 D-------------------------AVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRC 338 (1255)
T ss_pred H-------------------------HHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhh
Confidence 2 33444445555444444332 13445555666666666655543 334566667
Q ss_pred CCccEEEcCCCcCCccCccccCCCCcceEECCCCCCCCCCCC
Q psy11648 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGR 577 (584)
Q Consensus 536 ~~L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~~n~l~~~p~~ 577 (584)
++|+.|.|+.|++..+|+.+.-++.|+.||++.|+--.+|+.
T Consensus 339 ~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 339 VKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred HHHHHhcccccceeechhhhhhcCCcceeeccCCcCccCCCC
Confidence 777777777777777777777777777777777765555543
No 10
>KOG0444|consensus
Probab=99.94 E-value=1.1e-28 Score=237.84 Aligned_cols=356 Identities=21% Similarity=0.285 Sum_probs=263.0
Q ss_pred CccccCCCccceeccccccccchhhhccccccccccccccccc-----ccceeeeecCCceeecCCccccccccceeeEE
Q psy11648 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFN-----SKLRELEITGKDLKFIDPSAFDNIDACYDLTL 75 (584)
Q Consensus 1 ~~l~ls~~~~~~~~~~~~~~~l~~l~~Lr~L~l~~~~l~~l~~-----~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L 75 (584)
+-.|+|+|.+.|...+ ..+..+++++-|.+...++..+|. .+|++|.++.|++..+. ..+..+ +.|+ .+
T Consensus 10 rGvDfsgNDFsg~~FP---~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vh-GELs~L-p~LR-sv 83 (1255)
T KOG0444|consen 10 RGVDFSGNDFSGDRFP---HDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISVH-GELSDL-PRLR-SV 83 (1255)
T ss_pred ecccccCCcCCCCcCc---hhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhhh-hhhccc-hhhH-HH
Confidence 3579999999986655 457888888888999999999998 89999999999988753 456666 8899 99
Q ss_pred EecCcccc--cccccccccccccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeecccccccc
Q psy11648 76 KITNTQIE--ELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITD 153 (584)
Q Consensus 76 ~ls~n~i~--~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~ 153 (584)
++.+|++. .||..+|+.-. |+ .||||+|++++ +|..+...+++-.|++|+|.|..
T Consensus 84 ~~R~N~LKnsGiP~diF~l~d-Lt--~lDLShNqL~E--------------------vP~~LE~AKn~iVLNLS~N~Iet 140 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKD-LT--ILDLSHNQLRE--------------------VPTNLEYAKNSIVLNLSYNNIET 140 (1255)
T ss_pred hhhccccccCCCCchhccccc-ce--eeecchhhhhh--------------------cchhhhhhcCcEEEEcccCcccc
Confidence 99999987 89999999988 99 99999998874 45556666778888888888887
Q ss_pred ccccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCcc
Q psy11648 154 LNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNV 233 (584)
Q Consensus 154 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~ 233 (584)
++...|.++ +-|-.||||+......|..+. .+.+|++|++++|.+.......+..++.|+.|.+++.+-+- ..+|..
T Consensus 141 IPn~lfinL-tDLLfLDLS~NrLe~LPPQ~R-RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl-~N~Pts 217 (1255)
T KOG0444|consen 141 IPNSLFINL-TDLLFLDLSNNRLEMLPPQIR-RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTL-DNIPTS 217 (1255)
T ss_pred CCchHHHhh-HhHhhhccccchhhhcCHHHH-HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchh-hcCCCc
Confidence 776666544 346677777444444444454 67788888888887766555556667777777777764321 125667
Q ss_pred ccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccc
Q psy11648 234 FDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNI 313 (584)
Q Consensus 234 ~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~ 313 (584)
+..+.+|..++++.|.+. .+|+.. ..+++|+.|++++|.++.+.. ......+|++|+++.|+++.+|..+.+
T Consensus 218 ld~l~NL~dvDlS~N~Lp--~vPecl--y~l~~LrrLNLS~N~iteL~~-~~~~W~~lEtLNlSrNQLt~LP~avcK--- 289 (1255)
T KOG0444|consen 218 LDDLHNLRDVDLSENNLP--IVPECL--YKLRNLRRLNLSGNKITELNM-TEGEWENLETLNLSRNQLTVLPDAVCK--- 289 (1255)
T ss_pred hhhhhhhhhccccccCCC--cchHHH--hhhhhhheeccCcCceeeeec-cHHHHhhhhhhccccchhccchHHHhh---
Confidence 777777888888877773 677776 477788888888887776543 445566777888888887777776665
Q ss_pred cCCccEEEcCCCcccc-cccccccCCCCCcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEE
Q psy11648 314 HKRLKEIRLSNNYLEL-IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392 (584)
Q Consensus 314 ~~~L~~L~l~~~~~~~-~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 392 (584)
+++|+.|++.+|.++. -.|..++.+..|+.+..++|.+.- .|..+..|.+|+.|.++.|.+... |+++.-++.|+.|
T Consensus 290 L~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LEl-VPEglcRC~kL~kL~L~~NrLiTL-PeaIHlL~~l~vL 367 (1255)
T KOG0444|consen 290 LTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLEL-VPEGLCRCVKLQKLKLDHNRLITL-PEAIHLLPDLKVL 367 (1255)
T ss_pred hHHHHHHHhccCcccccCCccchhhhhhhHHHHhhcccccc-CchhhhhhHHHHHhcccccceeec-hhhhhhcCCccee
Confidence 6777777777776653 234556777777777777776643 366677777888888887777666 6777777788888
Q ss_pred ecCCCC
Q psy11648 393 DLQDNK 398 (584)
Q Consensus 393 ~l~~~~ 398 (584)
|+..|+
T Consensus 368 DlreNp 373 (1255)
T KOG0444|consen 368 DLRENP 373 (1255)
T ss_pred eccCCc
Confidence 887776
No 11
>KOG4237|consensus
Probab=99.90 E-value=7.9e-25 Score=200.41 Aligned_cols=411 Identities=23% Similarity=0.271 Sum_probs=214.9
Q ss_pred eeeecCCceeecCCccccccccceeeEEEecCcccccccccccccccccceeeeecCCCceeeechhhhccchhcccccC
Q psy11648 48 ELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLG 127 (584)
Q Consensus 48 ~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~ 127 (584)
..++++.++++++.+.- +.-. +++|..|+|+.||++.|+..++|+ .||||+|.|+.+.+++|..+..
T Consensus 50 ~VdCr~~GL~eVP~~LP----~~tv-eirLdqN~I~~iP~~aF~~l~~LR--rLdLS~N~Is~I~p~AF~GL~~------ 116 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLP----PETV-EIRLDQNQISSIPPGAFKTLHRLR--RLDLSKNNISFIAPDAFKGLAS------ 116 (498)
T ss_pred eEEccCCCcccCcccCC----Ccce-EEEeccCCcccCChhhccchhhhc--eecccccchhhcChHhhhhhHh------
Confidence 45677777777765443 3445 788999999999999999999999 9999999999888887776654
Q ss_pred ceeccchhhcCCccceeec-cccccccccccccchhhHHHHHhhcC-CCCCCcccchhHhhccCCcEEEcCCCcccccch
Q psy11648 128 TTILKDREKLLSNLETLLL-RCNKITDLNGNLFRHLQKSIVKAKKN-NNNNEDQVSDREKLLSNLETLLLRCNKITDLNG 205 (584)
Q Consensus 128 l~~l~~~l~~~~~L~~L~l-~~n~i~~~~~~~~~~~~~~L~~L~l~-~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 205 (584)
+..|-+ ++|+|+++..++|.++ .+++-|.+. +.+..+..+.|. .++++..|.+.++.+..+..
T Consensus 117 -------------l~~Lvlyg~NkI~~l~k~~F~gL-~slqrLllNan~i~Cir~~al~-dL~~l~lLslyDn~~q~i~~ 181 (498)
T KOG4237|consen 117 -------------LLSLVLYGNNKITDLPKGAFGGL-SSLQRLLLNANHINCIRQDALR-DLPSLSLLSLYDNKIQSICK 181 (498)
T ss_pred -------------hhHHHhhcCCchhhhhhhHhhhH-HHHHHHhcChhhhcchhHHHHH-Hhhhcchhcccchhhhhhcc
Confidence 333222 2355555555444433 234445554 444444455554 78888888888888887777
Q ss_pred hhhcCCCCCCEEEcCCCcccee----------ecCCccccccccceEEeecccccC------------------------
Q psy11648 206 NLFRHLYNLQELSLSFNKLQII----------ELNSNVFDVFEKLQLLEISFSLFN------------------------ 251 (584)
Q Consensus 206 ~~~~~~~~L~~L~l~~~~l~~~----------~~~~~~~~~l~~L~~L~l~~~~~~------------------------ 251 (584)
.+|..+..++.+.+..|.+... .+.+..++++....-..+.+..+.
T Consensus 182 ~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~ 261 (498)
T KOG4237|consen 182 GTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFP 261 (498)
T ss_pred ccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCc
Confidence 7888888888888876652110 001222333222222222222111
Q ss_pred CCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCcccccc
Q psy11648 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331 (584)
Q Consensus 252 ~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~ 331 (584)
+...|...| +++++|+.|++++|.++.+...+|.....++.|.+.+|++..+....|.+ +..|++|++.+|+++.+.
T Consensus 262 d~~cP~~cf-~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~--ls~L~tL~L~~N~it~~~ 338 (498)
T KOG4237|consen 262 DSICPAKCF-KKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQG--LSGLKTLSLYDNQITTVA 338 (498)
T ss_pred CCcChHHHH-hhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhc--cccceeeeecCCeeEEEe
Confidence 122333334 55555555555555555555555555555555555555555555544444 555555555555555555
Q ss_pred cccccCCCCCcEEEccCCcCCCc-ChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEEecCCCCCCCCChhhhccc
Q psy11648 332 SDTFYNLKELNTITLSYNLLKSI-KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNI 410 (584)
Q Consensus 332 ~~~l~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~ 410 (584)
+..|.....|.++.+-.|++.-. .-.|++. . +.+....+. ..-+....++.+.+++..+.+...+.-...
T Consensus 339 ~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~--W-----lr~~~~~~~--~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~ 409 (498)
T KOG4237|consen 339 PGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE--W-----LRKKSVVGN--PRCQSPGFVRQIPISDVAFGDFRCGGPEEL 409 (498)
T ss_pred cccccccceeeeeehccCcccCccchHHHHH--H-----HhhCCCCCC--CCCCCCchhccccchhccccccccCCcccc
Confidence 55555555555555554443311 0001100 0 001111111 011222345556665555443322200000
Q ss_pred ccCCCCceEECCCCccccccccccccccCcccE-EEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcc
Q psy11648 411 TSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS-LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489 (584)
Q Consensus 411 ~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~-L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~ 489 (584)
-...-+.| -..++.+.+ ...++..+..+|. +.|..-.++++.+|.++.++.+ .+++
T Consensus 410 ------~~~~s~~c----------P~~c~c~~tVvRcSnk~lk~lp~----~iP~d~telyl~gn~~~~vp~~---~~~~ 466 (498)
T KOG4237|consen 410 ------GCLTSSPC----------PPPCTCLDTVVRCSNKLLKLLPR----GIPVDVTELYLDGNAITSVPDE---LLRS 466 (498)
T ss_pred ------CCCCCCCC----------CCCcchhhhhHhhcccchhhcCC----CCCchhHHHhcccchhcccCHH---HHhh
Confidence 00000000 011222322 2333333333332 2224455666777766666554 3445
Q ss_pred cCeeeccCcccccccccccCCCCCccEEECCCC
Q psy11648 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522 (584)
Q Consensus 490 L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n 522 (584)
| .+|+++|.+.......|.++++|.+|.+++|
T Consensus 467 l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 467 L-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred h-hcccccCceehhhcccccchhhhheeEEecC
Confidence 5 6677777776666666777777777777764
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.87 E-value=4.1e-20 Score=207.99 Aligned_cols=341 Identities=21% Similarity=0.228 Sum_probs=252.7
Q ss_pred cchhhhcCCCCCCEEEcCCCccce---e-ecCCcccccc-ccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccc
Q psy11648 203 LNGNLFRHLYNLQELSLSFNKLQI---I-ELNSNVFDVF-EKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNI 277 (584)
Q Consensus 203 ~~~~~~~~~~~L~~L~l~~~~l~~---~-~~~~~~~~~l-~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l 277 (584)
+...+|.+|++|+.|.+..+.... . ...|..+..+ ++|+.|.+.++.+ ..+|..+ ...+|++|++.++.+
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l--~~lP~~f---~~~~L~~L~L~~s~l 623 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPL--RCMPSNF---RPENLVKLQMQGSKL 623 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCC--CCCCCcC---CccCCcEEECcCccc
Confidence 455678999999999996553211 0 0135556665 4699999999887 4788775 578999999999998
Q ss_pred cccccccccCCCCCcEEEcccCC-CcccccccccccccCCccEEEcCCCcccccccccccCCCCCcEEEccCCcCCCcCh
Q psy11648 278 KNIRNYSLYNLTSLNYINLEYNK-ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKT 356 (584)
Q Consensus 278 ~~~~~~~l~~l~~L~~L~l~~~~-l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~ 356 (584)
..++. .+..+++|+.++++++. +..+|. +.. +++|+.|++.+|......|..+..+++|+.|++++|......|
T Consensus 624 ~~L~~-~~~~l~~Lk~L~Ls~~~~l~~ip~--ls~--l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 624 EKLWD-GVHSLTGLRNIDLRGSKNLKEIPD--LSM--ATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILP 698 (1153)
T ss_pred ccccc-ccccCCCCCEEECCCCCCcCcCCc--ccc--CCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccC
Confidence 87654 67889999999999874 556654 222 7999999999987666667778899999999999985444444
Q ss_pred hhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCCccccccc-----
Q psy11648 357 TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE----- 431 (584)
Q Consensus 357 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~----- 431 (584)
..+ ++++|+.|++++|......|.. ..+|++|++++|.+...+... ..++|+.|.+.++....+..
T Consensus 699 ~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP~~~-----~l~~L~~L~l~~~~~~~l~~~~~~l 769 (1153)
T PLN03210 699 TGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEFPSNL-----RLENLDELILCEMKSEKLWERVQPL 769 (1153)
T ss_pred CcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccccccc-----cccccccccccccchhhcccccccc
Confidence 433 6889999999998755444432 467899999999877654321 34567777776643222111
Q ss_pred -cccccccCcccEEEccCCC-CCCCChhhHHHhhCCCcEEEccCCc-ccccCccccCCCcccCeeeccCccccccccccc
Q psy11648 432 -NDKKQAPIYIKSLDLSNNR-IQEVPVNFLQTFADSLRKLYLDFNE-IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508 (584)
Q Consensus 432 -~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~ 508 (584)
......+++|+.|++++|. +..+| ..+..+ ++|+.|++++|. +..++. .. .+++|+.|++++|......|.
T Consensus 770 ~~~~~~~~~sL~~L~Ls~n~~l~~lP-~si~~L-~~L~~L~Ls~C~~L~~LP~-~~-~L~sL~~L~Ls~c~~L~~~p~-- 843 (1153)
T PLN03210 770 TPLMTMLSPSLTRLFLSDIPSLVELP-SSIQNL-HKLEHLEIENCINLETLPT-GI-NLESLESLDLSGCSRLRTFPD-- 843 (1153)
T ss_pred chhhhhccccchheeCCCCCCccccC-hhhhCC-CCCCEEECCCCCCcCeeCC-CC-CccccCEEECCCCCccccccc--
Confidence 0112235789999999986 55677 457777 999999999984 555443 33 689999999999875544443
Q ss_pred CCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCC-cCCccCccccCCCCcceEECCCCC
Q psy11648 509 IGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN-RLRSLPRDVFSNTIIEKLDISYNQ 570 (584)
Q Consensus 509 ~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n-~l~~lp~~l~~~~~L~~l~l~~n~ 570 (584)
..++|+.|++++|.+..++ ..+..+++|+.|++++| +++.+|.....+++|+.+++++|.
T Consensus 844 -~~~nL~~L~Ls~n~i~~iP-~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 844 -ISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred -cccccCEeECCCCCCccCh-HHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 3468999999999998765 56788999999999997 899999988889999999999985
No 13
>KOG4237|consensus
Probab=99.86 E-value=1.6e-23 Score=191.88 Aligned_cols=297 Identities=24% Similarity=0.259 Sum_probs=212.1
Q ss_pred EEEecCcccccccccccccccccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeecccccccc
Q psy11648 74 TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITD 153 (584)
Q Consensus 74 ~L~ls~n~i~~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~ 153 (584)
.+|-++-.++++|..+=.... .|+|..|.|+.+.+.+ |+.+++|+.|||++|.|+.
T Consensus 50 ~VdCr~~GL~eVP~~LP~~tv-----eirLdqN~I~~iP~~a-------------------F~~l~~LRrLdLS~N~Is~ 105 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLPPETV-----EIRLDQNQISSIPPGA-------------------FKTLHRLRRLDLSKNNISF 105 (498)
T ss_pred eEEccCCCcccCcccCCCcce-----EEEeccCCcccCChhh-------------------ccchhhhceecccccchhh
Confidence 477777778888887655544 7889999888766554 4556899999999999999
Q ss_pred ccccccchhhHHHHHhhcC-CCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCc
Q psy11648 154 LNGNLFRHLQKSIVKAKKN-NNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232 (584)
Q Consensus 154 ~~~~~~~~~~~~L~~L~l~-~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~ 232 (584)
+.+++|.++..-++.++.+ |.+.++....|. .+..++.|.+.-+.+.-+...+|..+++++.|.+.+|.+..+ -..
T Consensus 106 I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~-gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i--~~~ 182 (498)
T KOG4237|consen 106 IAPDAFKGLASLLSLVLYGNNKITDLPKGAFG-GLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSI--CKG 182 (498)
T ss_pred cChHhhhhhHhhhHHHhhcCCchhhhhhhHhh-hHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhh--ccc
Confidence 9999999998888888888 889999888887 899999999999999988889999999999999999988766 445
Q ss_pred cccccccceEEeecccccCCCC-ch---hh------HhhhcCCCCCEEEccCccccccccccccCC-CCCc-EEEcccCC
Q psy11648 233 VFDVFEKLQLLEISFSLFNSNE-FP---YY------ILNKNLNTLEWLAMDNNNIKNIRNYSLYNL-TSLN-YINLEYNK 300 (584)
Q Consensus 233 ~~~~l~~L~~L~l~~~~~~~~~-l~---~~------~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l-~~L~-~L~l~~~~ 300 (584)
.|..+..++++.+..+.+.... +| .. .+ ++........+.+..+..+....+... ..+. .+.-.++.
T Consensus 183 tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~iet-sgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~ 261 (498)
T KOG4237|consen 183 TFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIET-SGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFP 261 (498)
T ss_pred cccchhccchHhhhcCccccccccchhhhHHhhchhhc-ccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCc
Confidence 7888888899888887643110 11 00 00 112222222222223332322222211 0111 11111112
Q ss_pred CcccccccccccccCCccEEEcCCCcccccccccccCCCCCcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCC
Q psy11648 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380 (584)
Q Consensus 301 l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 380 (584)
...-|...|.. +++|+.+++++|.++.+...+|.+...+++|.+..|++..+....|.++..|+.|++.+|.++.+.|
T Consensus 262 d~~cP~~cf~~--L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~ 339 (498)
T KOG4237|consen 262 DSICPAKCFKK--LPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP 339 (498)
T ss_pred CCcChHHHHhh--cccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec
Confidence 22333344544 7888888888888888877888888888888888888877777778888888888888888888888
Q ss_pred ccCCCCCCCcEEecCCCCCC
Q psy11648 381 NAFVNLPNLVKLDLQDNKLK 400 (584)
Q Consensus 381 ~~~~~~~~L~~L~l~~~~l~ 400 (584)
.+|....+|.+|.+-.|++.
T Consensus 340 ~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 340 GAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred ccccccceeeeeehccCccc
Confidence 88888888888888877753
No 14
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.85 E-value=1.6e-19 Score=203.26 Aligned_cols=326 Identities=17% Similarity=0.129 Sum_probs=245.2
Q ss_pred CCccccccccceEEeecccccCC-----CCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcccCCCccc
Q psy11648 230 NSNVFDVFEKLQLLEISFSLFNS-----NEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI 304 (584)
Q Consensus 230 ~~~~~~~l~~L~~L~l~~~~~~~-----~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i 304 (584)
...+|.++++|+.|.+..+.... ..+|..+. .-..+|+.|.+.++.+..++. .+ ...+|+.|++.++.+..+
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~-~lp~~Lr~L~~~~~~l~~lP~-~f-~~~~L~~L~L~~s~l~~L 626 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFD-YLPPKLRLLRWDKYPLRCMPS-NF-RPENLVKLQMQGSKLEKL 626 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchh-hcCcccEEEEecCCCCCCCCC-cC-CccCCcEEECcCcccccc
Confidence 45678999999999997653210 24555553 234579999999999888875 34 568999999999999888
Q ss_pred ccccccccccCCccEEEcCCCcccccccccccCCCCCcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCC
Q psy11648 305 HNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384 (584)
Q Consensus 305 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 384 (584)
+..... +++|+.++++++......+ .+..+++|+.|++++|......+..+..+++|+.|++++|......|..+
T Consensus 627 ~~~~~~---l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i- 701 (1153)
T PLN03210 627 WDGVHS---LTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI- 701 (1153)
T ss_pred cccccc---CCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-
Confidence 766543 8999999999876444334 37788999999999987666667788899999999999986444445444
Q ss_pred CCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCCccccccccccccccCcccEEEccCCCCC-------CCChh
Q psy11648 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ-------EVPVN 457 (584)
Q Consensus 385 ~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~-------~~~~~ 457 (584)
.+++|+.|++++|......+ . ...+++.|+++++.+..++... .+++|+.|.+..+... .++..
T Consensus 702 ~l~sL~~L~Lsgc~~L~~~p----~--~~~nL~~L~L~~n~i~~lP~~~---~l~~L~~L~l~~~~~~~l~~~~~~l~~~ 772 (1153)
T PLN03210 702 NLKSLYRLNLSGCSRLKSFP----D--ISTNISWLDLDETAIEEFPSNL---RLENLDELILCEMKSEKLWERVQPLTPL 772 (1153)
T ss_pred CCCCCCEEeCCCCCCccccc----c--ccCCcCeeecCCCccccccccc---cccccccccccccchhhccccccccchh
Confidence 78999999999986433221 1 1347789999999988776544 3578888888764322 22212
Q ss_pred hHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCC
Q psy11648 458 FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537 (584)
Q Consensus 458 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~ 537 (584)
.+. .+++|+.|++++|......|..++++++|+.|++++|.....+|... .+++|+.|++++|......|.. .++
T Consensus 773 ~~~-~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~n 847 (1153)
T PLN03210 773 MTM-LSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STN 847 (1153)
T ss_pred hhh-ccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccc
Confidence 222 23899999999997665566778999999999999986555566554 7899999999998654333332 468
Q ss_pred ccEEEcCCCcCCccCccccCCCCcceEECCC-CCCCCCCCC
Q psy11648 538 LRILNISHNRLRSLPRDVFSNTIIEKLDISY-NQDKIRPGR 577 (584)
Q Consensus 538 L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~~-n~l~~~p~~ 577 (584)
|++|++++|.++.+|..+..+++|+.|++++ +.++.+|..
T Consensus 848 L~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~C~~L~~l~~~ 888 (1153)
T PLN03210 848 ISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLN 888 (1153)
T ss_pred cCEeECCCCCCccChHHHhcCCCCCEEECCCCCCcCccCcc
Confidence 9999999999999999999999999999998 456677764
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.84 E-value=5e-20 Score=192.22 Aligned_cols=258 Identities=19% Similarity=0.227 Sum_probs=185.1
Q ss_pred CCCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCcccccccccccCCCCCcEE
Q psy11648 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTI 344 (584)
Q Consensus 265 ~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L 344 (584)
..-..|+++++.++.+|+ .+. ++|+.|++.+|+++.+|.. +++|++|++++|.++.++. ..++|+.|
T Consensus 201 ~~~~~LdLs~~~LtsLP~-~l~--~~L~~L~L~~N~Lt~LP~l------p~~Lk~LdLs~N~LtsLP~----lp~sL~~L 267 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPD-CLP--AHITTLVIPDNNLTSLPAL------PPELRTLEVSGNQLTSLPV----LPPGLLEL 267 (788)
T ss_pred CCCcEEEcCCCCCCcCCc-chh--cCCCEEEccCCcCCCCCCC------CCCCcEEEecCCccCcccC----ccccccee
Confidence 345677777777776654 332 3677788888777777653 5777888888887776532 23577778
Q ss_pred EccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCC
Q psy11648 345 TLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424 (584)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~ 424 (584)
++++|.+..+.. ....|+.|++++|.++.+ |. ..++|+.|++++|.+++++. . ...++.|++++|
T Consensus 268 ~Ls~N~L~~Lp~----lp~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~~Lp~-l------p~~L~~L~Ls~N 332 (788)
T PRK15387 268 SIFSNPLTHLPA----LPSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLASLPA-L------PSELCKLWAYNN 332 (788)
T ss_pred eccCCchhhhhh----chhhcCEEECcCCccccc-cc---cccccceeECCCCccccCCC-C------cccccccccccC
Confidence 888877765421 225677788888877765 32 24678888888888776542 1 124677788888
Q ss_pred ccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCccccccc
Q psy11648 425 YITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504 (584)
Q Consensus 425 ~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 504 (584)
.++.++. ...+|+.|++++|+++.+|. .+.+|+.|++++|++..++. ...+|+.|++++|.++..
T Consensus 333 ~L~~LP~-----lp~~Lq~LdLS~N~Ls~LP~-----lp~~L~~L~Ls~N~L~~LP~----l~~~L~~LdLs~N~Lt~L- 397 (788)
T PRK15387 333 QLTSLPT-----LPSGLQELSVSDNQLASLPT-----LPSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTSL- 397 (788)
T ss_pred ccccccc-----cccccceEecCCCccCCCCC-----CCcccceehhhccccccCcc----cccccceEEecCCcccCC-
Confidence 8876653 13578899999988888773 13778888898888876543 135788999999988753
Q ss_pred ccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCccCccccCCCCcceEECCCCCCC
Q psy11648 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572 (584)
Q Consensus 505 ~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~~n~l~ 572 (584)
|. ..++|+.|++++|+++.++. . ..+|+.|++++|+|+.+|..+..+++|+.|++++|+++
T Consensus 398 P~---l~s~L~~LdLS~N~LssIP~-l---~~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls 458 (788)
T PRK15387 398 PV---LPSELKELMVSGNRLTSLPM-L---PSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS 458 (788)
T ss_pred CC---cccCCCEEEccCCcCCCCCc-c---hhhhhhhhhccCcccccChHHhhccCCCeEECCCCCCC
Confidence 32 23678899999999887653 2 35788899999999999988888899999999999998
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=1.1e-19 Score=189.55 Aligned_cols=141 Identities=21% Similarity=0.204 Sum_probs=76.8
Q ss_pred CCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCccccccccceEEeecccccCCCCchhhHhhhcCCCCC
Q psy11648 189 NLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268 (584)
Q Consensus 189 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~ 268 (584)
.|+.|++++|.++.++. + ..+|++|++++|++..+ |.. ..+|+.|++++|.+. .+|.. ..+|+
T Consensus 323 ~L~~L~Ls~N~L~~LP~--l--p~~Lq~LdLS~N~Ls~L---P~l---p~~L~~L~Ls~N~L~--~LP~l-----~~~L~ 385 (788)
T PRK15387 323 ELCKLWAYNNQLTSLPT--L--PSGLQELSVSDNQLASL---PTL---PSELYKLWAYNNRLT--SLPAL-----PSGLK 385 (788)
T ss_pred cccccccccCccccccc--c--ccccceEecCCCccCCC---CCC---Ccccceehhhccccc--cCccc-----ccccc
Confidence 45556666666654332 1 13566666666666543 221 234556666666553 34422 23566
Q ss_pred EEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCcccccccccccCCCCCcEEEccC
Q psy11648 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348 (584)
Q Consensus 269 ~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~ 348 (584)
.|++++|.++.++. . .++|+.|++++|.++.+|.. ..+|+.|++++|+++.+ |..+..++.++.+++++
T Consensus 386 ~LdLs~N~Lt~LP~-l---~s~L~~LdLS~N~LssIP~l------~~~L~~L~Ls~NqLt~L-P~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 386 ELIVSGNRLTSLPV-L---PSELKELMVSGNRLTSLPML------PSGLLSLSVYRNQLTRL-PESLIHLSSETTVNLEG 454 (788)
T ss_pred eEEecCCcccCCCC-c---ccCCCEEEccCCcCCCCCcc------hhhhhhhhhccCccccc-ChHHhhccCCCeEECCC
Confidence 66666666665443 1 24566666666666655542 34455666666666644 34455566666666666
Q ss_pred CcCCCcChh
Q psy11648 349 NLLKSIKTT 357 (584)
Q Consensus 349 ~~~~~~~~~ 357 (584)
|++++..+.
T Consensus 455 N~Ls~~~~~ 463 (788)
T PRK15387 455 NPLSERTLQ 463 (788)
T ss_pred CCCCchHHH
Confidence 666654433
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.73 E-value=1.9e-17 Score=174.22 Aligned_cols=246 Identities=22% Similarity=0.330 Sum_probs=127.4
Q ss_pred CCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCcccccccccccCCCCCcEEE
Q psy11648 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345 (584)
Q Consensus 266 ~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~ 345 (584)
+...|+++++.++.++. .+ .+.++.|++++|+++.+|... ..+|+.|++++|.++.+.. .+ ...|+.|+
T Consensus 179 ~~~~L~L~~~~LtsLP~-~I--p~~L~~L~Ls~N~LtsLP~~l-----~~nL~~L~Ls~N~LtsLP~-~l--~~~L~~L~ 247 (754)
T PRK15370 179 NKTELRLKILGLTTIPA-CI--PEQITTLILDNNELKSLPENL-----QGNIKTLYANSNQLTSIPA-TL--PDTIQEME 247 (754)
T ss_pred CceEEEeCCCCcCcCCc-cc--ccCCcEEEecCCCCCcCChhh-----ccCCCEEECCCCccccCCh-hh--hccccEEE
Confidence 45566666666665543 22 245666666666666665543 3456666666666654422 11 13455666
Q ss_pred ccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCCc
Q psy11648 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425 (584)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~ 425 (584)
+++|.+..+ |..+. .+|+.|++++|.+..+ |..+. ++|+.|++++|.++.
T Consensus 248 Ls~N~L~~L-P~~l~--s~L~~L~Ls~N~L~~L-P~~l~--~sL~~L~Ls~N~Lt~------------------------ 297 (754)
T PRK15370 248 LSINRITEL-PERLP--SALQSLDLFHNKISCL-PENLP--EELRYLSVYDNSIRT------------------------ 297 (754)
T ss_pred CcCCccCcC-ChhHh--CCCCEEECcCCccCcc-ccccC--CCCcEEECCCCcccc------------------------
Confidence 666655533 22221 3455555555555543 22221 345555555555443
Q ss_pred cccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccccccc
Q psy11648 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505 (584)
Q Consensus 426 l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 505 (584)
++... .++|+.|++++|.++.+|... +++|+.|++++|.++.++.. + .++|+.|++++|.+.. +|
T Consensus 298 ---LP~~l----p~sL~~L~Ls~N~Lt~LP~~l----~~sL~~L~Ls~N~Lt~LP~~-l--~~sL~~L~Ls~N~L~~-LP 362 (754)
T PRK15370 298 ---LPAHL----PSGITHLNVQSNSLTALPETL----PPGLKTLEAGENALTSLPAS-L--PPELQVLDVSKNQITV-LP 362 (754)
T ss_pred ---Ccccc----hhhHHHHHhcCCccccCCccc----cccceeccccCCccccCChh-h--cCcccEEECCCCCCCc-CC
Confidence 32211 134555566665555554221 14566666666665554322 2 1456666666666553 23
Q ss_pred cccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCccCccccC----CCCcceEECCCCCCC
Q psy11648 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS----NTIIEKLDISYNQDK 572 (584)
Q Consensus 506 ~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp~~l~~----~~~L~~l~l~~n~l~ 572 (584)
..+ .++|+.|++++|++..+++... ..|+.|++++|+++.+|..+.. ++.+..+++.+|+++
T Consensus 363 ~~l--p~~L~~LdLs~N~Lt~LP~~l~---~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 363 ETL--PPTITTLDVSRNALTNLPENLP---AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hhh--cCCcCEEECCCCcCCCCCHhHH---HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 222 2466666666666665544321 3566666666666665543322 256666666666664
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.70 E-value=2.4e-17 Score=173.50 Aligned_cols=243 Identities=22% Similarity=0.264 Sum_probs=132.2
Q ss_pred cccccccccccccccc---ccceeeeecCCceeecCCccccccccceeeEEEecCcccccccccccccccccceeeeecC
Q psy11648 28 LGTTILKGDQLQGIFN---SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104 (584)
Q Consensus 28 Lr~L~l~~~~l~~l~~---~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~~l~~~~~~~~~~L~~~~L~ls 104 (584)
...|+++++.++.+|. ++++.|++++|+++.++...+ .+|+ +|++++|+++.+|..+.. .|+ .|+++
T Consensus 180 ~~~L~L~~~~LtsLP~~Ip~~L~~L~Ls~N~LtsLP~~l~----~nL~-~L~Ls~N~LtsLP~~l~~---~L~--~L~Ls 249 (754)
T PRK15370 180 KTELRLKILGLTTIPACIPEQITTLILDNNELKSLPENLQ----GNIK-TLYANSNQLTSIPATLPD---TIQ--EMELS 249 (754)
T ss_pred ceEEEeCCCCcCcCCcccccCCcEEEecCCCCCcCChhhc----cCCC-EEECCCCccccCChhhhc---ccc--EEECc
Confidence 3455666666666665 566666666666665443322 3566 666666666666654432 355 66666
Q ss_pred CCceeeechhhhccchhcccccCceeccchhhcCCccceeeccccccccccccccchhhHHHHHhhcCCCCCCcccchhH
Q psy11648 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDRE 184 (584)
Q Consensus 105 ~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 184 (584)
+|.+..+ |..+. ++|+.|++++|.++.++. .+
T Consensus 250 ~N~L~~L--------------------P~~l~--s~L~~L~Ls~N~L~~LP~-------------------------~l- 281 (754)
T PRK15370 250 INRITEL--------------------PERLP--SALQSLDLFHNKISCLPE-------------------------NL- 281 (754)
T ss_pred CCccCcC--------------------ChhHh--CCCCEEECcCCccCcccc-------------------------cc-
Confidence 6655422 22221 356666666666654421 11
Q ss_pred hhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCccccccccceEEeecccccCCCCchhhHhhhcC
Q psy11648 185 KLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNL 264 (584)
Q Consensus 185 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~ 264 (584)
.++|+.|++++|.++.++.. +. ++|+.|++++|.+..+ |..+ .++|+.|++++|.+. .+|..+ .
T Consensus 282 --~~sL~~L~Ls~N~Lt~LP~~-lp--~sL~~L~Ls~N~Lt~L---P~~l--~~sL~~L~Ls~N~Lt--~LP~~l----~ 345 (754)
T PRK15370 282 --PEELRYLSVYDNSIRTLPAH-LP--SGITHLNVQSNSLTAL---PETL--PPGLKTLEAGENALT--SLPASL----P 345 (754)
T ss_pred --CCCCcEEECCCCccccCccc-ch--hhHHHHHhcCCccccC---Cccc--cccceeccccCCccc--cCChhh----c
Confidence 14566666666666654321 11 3566666666665543 2222 245666666666664 455433 2
Q ss_pred CCCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCcccccc---cccccCCCCC
Q psy11648 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE---SDTFYNLKEL 341 (584)
Q Consensus 265 ~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~---~~~l~~~~~L 341 (584)
++|+.|++++|.++.++. .+ .+.|++|++++|.++.+|... ...|+.|++++|++..++ +.....++.+
T Consensus 346 ~sL~~L~Ls~N~L~~LP~-~l--p~~L~~LdLs~N~Lt~LP~~l-----~~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l 417 (754)
T PRK15370 346 PELQVLDVSKNQITVLPE-TL--PPTITTLDVSRNALTNLPENL-----PAALQIMQASRNNLVRLPESLPHFRGEGPQP 417 (754)
T ss_pred CcccEEECCCCCCCcCCh-hh--cCCcCEEECCCCcCCCCCHhH-----HHHHHHHhhccCCcccCchhHHHHhhcCCCc
Confidence 466677777666665443 22 246666777776666665542 234666666666665432 1122334556
Q ss_pred cEEEccCCcCC
Q psy11648 342 NTITLSYNLLK 352 (584)
Q Consensus 342 ~~L~l~~~~~~ 352 (584)
..+++.+|++.
T Consensus 418 ~~L~L~~Npls 428 (754)
T PRK15370 418 TRIIVEYNPFS 428 (754)
T ss_pred cEEEeeCCCcc
Confidence 66666666655
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.66 E-value=3.2e-17 Score=160.73 Aligned_cols=256 Identities=20% Similarity=0.196 Sum_probs=148.8
Q ss_pred ccccCCCccceeccccccccchhhhcccccccccccccc-----ccc-----ccceeeeecCCceee------cCCcccc
Q psy11648 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQG-----IFN-----SKLRELEITGKDLKF------IDPSAFD 65 (584)
Q Consensus 2 ~l~ls~~~~~~~~~~~~~~~l~~l~~Lr~L~l~~~~l~~-----l~~-----~~L~~L~ls~n~~~~------~~~~~~~ 65 (584)
.|+|.++++++.....+ ++.+..|+.|+++++.+++ ++. +++++++++++.+.. .....+.
T Consensus 2 ~l~L~~~~l~~~~~~~~---~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~ 78 (319)
T cd00116 2 QLSLKGELLKTERATEL---LPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLT 78 (319)
T ss_pred ccccccCcccccchHHH---HHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHH
Confidence 58899999987666543 6677778888999998854 332 668889988887652 1123344
Q ss_pred ccccceeeEEEecCcccccccccccccc---cccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcC-Ccc
Q psy11648 66 NIDACYDLTLKITNTQIEELPSGLFDKI---ENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLL-SNL 141 (584)
Q Consensus 66 ~~~~~L~~~L~ls~n~i~~l~~~~~~~~---~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~-~~L 141 (584)
.. ++|+ .|++++|.+.......+... ++|+ +|++++|++.+.....+ ...+..+ ++|
T Consensus 79 ~~-~~L~-~L~l~~~~~~~~~~~~~~~l~~~~~L~--~L~ls~~~~~~~~~~~l---------------~~~l~~~~~~L 139 (319)
T cd00116 79 KG-CGLQ-ELDLSDNALGPDGCGVLESLLRSSSLQ--ELKLNNNGLGDRGLRLL---------------AKGLKDLPPAL 139 (319)
T ss_pred hc-Ccee-EEEccCCCCChhHHHHHHHHhccCccc--EEEeeCCccchHHHHHH---------------HHHHHhCCCCc
Confidence 44 6788 88888887763222222222 3388 88888887764322211 1224445 778
Q ss_pred ceeeccccccccccccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCccccc----chhhhcCCCCCCEE
Q psy11648 142 ETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDL----NGNLFRHLYNLQEL 217 (584)
Q Consensus 142 ~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L 217 (584)
+.|++++|.+++.....+ ...+. .+++|++|++++|.+.+. .+..+..+++|++|
T Consensus 140 ~~L~L~~n~l~~~~~~~~--------------------~~~~~-~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L 198 (319)
T cd00116 140 EKLVLGRNRLEGASCEAL--------------------AKALR-ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVL 198 (319)
T ss_pred eEEEcCCCcCCchHHHHH--------------------HHHHH-hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEE
Confidence 888888887765322111 11222 456788888888877631 22344556678888
Q ss_pred EcCCCccceee--cCCccccccccceEEeecccccCCCCchhhHhhhc----CCCCCEEEccCcccccc----ccccccC
Q psy11648 218 SLSFNKLQIIE--LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKN----LNTLEWLAMDNNNIKNI----RNYSLYN 287 (584)
Q Consensus 218 ~l~~~~l~~~~--~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~----~~~L~~L~l~~~~l~~~----~~~~l~~ 287 (584)
++++|.+.+.. .....+..+++|++|++++|.+. +.-...+. .. .+.|++|++++|.++.. ....+..
T Consensus 199 ~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~-~~~~~~l~-~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~ 276 (319)
T cd00116 199 DLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT-DAGAAALA-SALLSPNISLLTLSLSCNDITDDGAKDLAEVLAE 276 (319)
T ss_pred eccCCccChHHHHHHHHHhcccCCCCEEecCCCcCc-hHHHHHHH-HHHhccCCCceEEEccCCCCCcHHHHHHHHHHhc
Confidence 88877664321 01233445566777777776654 21111111 11 35666666666665411 1112334
Q ss_pred CCCCcEEEcccCCCc
Q psy11648 288 LTSLNYINLEYNKIS 302 (584)
Q Consensus 288 l~~L~~L~l~~~~l~ 302 (584)
+++|+++++++|.++
T Consensus 277 ~~~L~~l~l~~N~l~ 291 (319)
T cd00116 277 KESLLELDLRGNKFG 291 (319)
T ss_pred CCCccEEECCCCCCc
Confidence 456666666666655
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.65 E-value=3.7e-17 Score=160.34 Aligned_cols=282 Identities=22% Similarity=0.218 Sum_probs=151.8
Q ss_pred EeecccccCCCCchhhHhhhcCCCCCEEEccCcccccc----ccccccCCCCCcEEEcccCCCcccccccccccccCCcc
Q psy11648 243 LEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI----RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318 (584)
Q Consensus 243 L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~----~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~ 318 (584)
|++..+.+........+ ..+.+|++++++++.++.. ....+...+.+++++++++.+...+..+
T Consensus 3 l~L~~~~l~~~~~~~~~--~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~---------- 70 (319)
T cd00116 3 LSLKGELLKTERATELL--PKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGL---------- 70 (319)
T ss_pred cccccCcccccchHHHH--HHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHH----------
Confidence 45555555423333322 5666677777777776421 1223445566777777666543211110
Q ss_pred EEEcCCCcccccccccccCCCCCcEEEccCCcCCCcChhhhccCcC---CCEEeccCCCCCcc----CCccCCCC-CCCc
Q psy11648 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNN---MLNIVLSFNQIKYI----YPNAFVNL-PNLV 390 (584)
Q Consensus 319 ~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~---L~~L~l~~~~~~~~----~~~~~~~~-~~L~ 390 (584)
...+..+..+++|++|++++|.+....+..+..+.. |+.|++++|.+.+. ....+..+ ++|+
T Consensus 71 ----------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~ 140 (319)
T cd00116 71 ----------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALE 140 (319)
T ss_pred ----------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCce
Confidence 011122344556666666666555433333333333 66666666655421 11223344 6666
Q ss_pred EEecCCCCCCCCChhhhcccccCCCCceEECCCCccccccccccccccCcccEEEccCCCCCCCCh----hhHHHhhCCC
Q psy11648 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV----NFLQTFADSL 466 (584)
Q Consensus 391 ~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~----~~~~~~~~~L 466 (584)
++++++|.+++.....+.. .+..++.|++|++++|.++.... ..+... ++|
T Consensus 141 ~L~L~~n~l~~~~~~~~~~------------------------~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~-~~L 195 (319)
T cd00116 141 KLVLGRNRLEGASCEALAK------------------------ALRANRDLKELNLANNGIGDAGIRALAEGLKAN-CNL 195 (319)
T ss_pred EEEcCCCcCCchHHHHHHH------------------------HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhC-CCC
Confidence 7777766665432221111 01123556666776666552111 112222 477
Q ss_pred cEEEccCCcccccC----ccccCCCcccCeeeccCccccccccccc-----CCCCCccEEECCCCCCCCc----Cccccc
Q psy11648 467 RKLYLDFNEIKHLD----ATAFGNLDVLELLSLEHNNIAVVVKRTF-----IGMPNLQIIDLSFNEISML----TGEQFY 533 (584)
Q Consensus 467 ~~L~l~~n~l~~~~----~~~l~~l~~L~~L~l~~n~~~~~~~~~~-----~~~~~L~~L~ls~n~i~~~----~~~~~~ 533 (584)
++|++++|.+.+.. ...+..+++|++|++++|.+.+.....+ ...+.|++|++++|.+++. ....+.
T Consensus 196 ~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~ 275 (319)
T cd00116 196 EVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLA 275 (319)
T ss_pred CEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHh
Confidence 77777777665332 2345567778888888887765222111 1247888888888887621 123345
Q ss_pred CCCCccEEEcCCCcCCc-----cCccccCC-CCcceEECCCCCC
Q psy11648 534 FSFKLRILNISHNRLRS-----LPRDVFSN-TIIEKLDISYNQD 571 (584)
Q Consensus 534 ~~~~L~~L~L~~n~l~~-----lp~~l~~~-~~L~~l~l~~n~l 571 (584)
.+++|+++++++|.++. +...+... +.|+.+++.+|++
T Consensus 276 ~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 276 EKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred cCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 56788888888888882 33334444 6888999888875
No 21
>KOG0617|consensus
Probab=99.51 E-value=2.8e-16 Score=127.98 Aligned_cols=161 Identities=29% Similarity=0.388 Sum_probs=133.2
Q ss_pred cCCCCceEECCCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccC
Q psy11648 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491 (584)
Q Consensus 412 ~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 491 (584)
....++.+.+++|+++.+++.... +.+|+.|++++|+++++| ..++.+ +.|+.|.+..|.+... |..|+.++.|+
T Consensus 31 ~~s~ITrLtLSHNKl~~vppnia~--l~nlevln~~nnqie~lp-~~issl-~klr~lnvgmnrl~~l-prgfgs~p~le 105 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNIAE--LKNLEVLNLSNNQIEELP-TSISSL-PKLRILNVGMNRLNIL-PRGFGSFPALE 105 (264)
T ss_pred chhhhhhhhcccCceeecCCcHHH--hhhhhhhhcccchhhhcC-hhhhhc-hhhhheecchhhhhcC-ccccCCCchhh
Confidence 344556667777777766665543 578999999999999998 455666 8999999998887654 56789999999
Q ss_pred eeeccCccccc-ccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCccCccccCCCCcceEECCCCC
Q psy11648 492 LLSLEHNNIAV-VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570 (584)
Q Consensus 492 ~L~l~~n~~~~-~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~~n~ 570 (584)
.||+.+|++.. ..|..|-.+..|+-|.++.|.+.-++++ .+.+++|+.|.+.+|.+-++|.+++.+++|++|.|.+|.
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~d-vg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPD-VGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChh-hhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccce
Confidence 99999988765 5677788889999999999998777665 678999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q psy11648 571 DKIRPGRE 578 (584)
Q Consensus 571 l~~~p~~~ 578 (584)
++.+|+++
T Consensus 185 l~vlppel 192 (264)
T KOG0617|consen 185 LTVLPPEL 192 (264)
T ss_pred eeecChhh
Confidence 99888764
No 22
>KOG0617|consensus
Probab=99.45 E-value=2.2e-15 Score=122.88 Aligned_cols=163 Identities=26% Similarity=0.393 Sum_probs=141.4
Q ss_pred hhcCCccceeeccccccccccccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCC
Q psy11648 135 EKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNL 214 (584)
Q Consensus 135 l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L 214 (584)
+..+.+++.|.++.|+++..++ .++ .+.+|+.|++.+|+++..+. .+..++.|
T Consensus 29 Lf~~s~ITrLtLSHNKl~~vpp-------------------------nia-~l~nlevln~~nnqie~lp~-~issl~kl 81 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTVVPP-------------------------NIA-ELKNLEVLNLSNNQIEELPT-SISSLPKL 81 (264)
T ss_pred ccchhhhhhhhcccCceeecCC-------------------------cHH-HhhhhhhhhcccchhhhcCh-hhhhchhh
Confidence 4567888999999999888754 444 78999999999999988765 78899999
Q ss_pred CEEEcCCCccceeecCCccccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEE
Q psy11648 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYI 294 (584)
Q Consensus 215 ~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L 294 (584)
+.|++.-|++.. .|..|+.++.|+.|++.+|.+....+|..+| .++.|+.|++++|.+..+++ .++++++|+.|
T Consensus 82 r~lnvgmnrl~~---lprgfgs~p~levldltynnl~e~~lpgnff--~m~tlralyl~dndfe~lp~-dvg~lt~lqil 155 (264)
T KOG0617|consen 82 RILNVGMNRLNI---LPRGFGSFPALEVLDLTYNNLNENSLPGNFF--YMTTLRALYLGDNDFEILPP-DVGKLTNLQIL 155 (264)
T ss_pred hheecchhhhhc---CccccCCCchhhhhhccccccccccCCcchh--HHHHHHHHHhcCCCcccCCh-hhhhhcceeEE
Confidence 999999888765 4899999999999999999998778898887 88899999999999998887 78999999999
Q ss_pred EcccCCCcccccccccccccCCccEEEcCCCcccccccc
Q psy11648 295 NLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333 (584)
Q Consensus 295 ~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 333 (584)
.+++|.+-++|..+.. +..|++|++.+|.++-.+|.
T Consensus 156 ~lrdndll~lpkeig~---lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 156 SLRDNDLLSLPKEIGD---LTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred eeccCchhhCcHHHHH---HHHHHHHhcccceeeecChh
Confidence 9999999888887655 78999999999988876543
No 23
>KOG1909|consensus
Probab=99.30 E-value=1.4e-13 Score=125.44 Aligned_cols=203 Identities=16% Similarity=0.182 Sum_probs=137.6
Q ss_pred cceeeEEEecCcccc-ccc---ccccccccccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCcccee
Q psy11648 69 ACYDLTLKITNTQIE-ELP---SGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETL 144 (584)
Q Consensus 69 ~~L~~~L~ls~n~i~-~l~---~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L 144 (584)
++|+ .||||.|.++ .-+ ..+...+..|+ +|.|.+|-+.......++.....+.. ......-++|+.+
T Consensus 92 ~~L~-~ldLSDNA~G~~g~~~l~~ll~s~~~L~--eL~L~N~Glg~~ag~~l~~al~~l~~------~kk~~~~~~Lrv~ 162 (382)
T KOG1909|consen 92 PKLQ-KLDLSDNAFGPKGIRGLEELLSSCTDLE--ELYLNNCGLGPEAGGRLGRALFELAV------NKKAASKPKLRVF 162 (382)
T ss_pred Ccee-EeeccccccCccchHHHHHHHHhccCHH--HHhhhcCCCChhHHHHHHHHHHHHHH------HhccCCCcceEEE
Confidence 6888 8899988877 111 22344466699 99999997765555554432111100 1122344689999
Q ss_pred eccccccccccccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCcccc----cchhhhcCCCCCCEEEcC
Q psy11648 145 LLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITD----LNGNLFRHLYNLQELSLS 220 (584)
Q Consensus 145 ~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~----~~~~~~~~~~~L~~L~l~ 220 (584)
..+.|++...+..+++. .|. ..+.|+.+.++.|.+.. .....+..+++|+.||+.
T Consensus 163 i~~rNrlen~ga~~~A~--------------------~~~-~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~ 221 (382)
T KOG1909|consen 163 ICGRNRLENGGATALAE--------------------AFQ-SHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLR 221 (382)
T ss_pred EeeccccccccHHHHHH--------------------HHH-hccccceEEEecccccCchhHHHHHHHHhCCcceeeecc
Confidence 99999888876655443 232 56889999999888763 344567889999999999
Q ss_pred CCcccee--ecCCccccccccceEEeecccccCCC---CchhhHhhhcCCCCCEEEccCcccccc----ccccccCCCCC
Q psy11648 221 FNKLQII--ELNSNVFDVFEKLQLLEISFSLFNSN---EFPYYILNKNLNTLEWLAMDNNNIKNI----RNYSLYNLTSL 291 (584)
Q Consensus 221 ~~~l~~~--~~~~~~~~~l~~L~~L~l~~~~~~~~---~l~~~~~~~~~~~L~~L~l~~~~l~~~----~~~~l~~l~~L 291 (584)
+|-++.. ......+..+++|+.|++++|.+.+. .+...+- ...|+|+++.+.+|.++.- ....+...+.|
T Consensus 222 DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~-~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL 300 (382)
T KOG1909|consen 222 DNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALK-ESAPSLEVLELAGNEITRDAALALAACMAEKPDL 300 (382)
T ss_pred cchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHh-ccCCCCceeccCcchhHHHHHHHHHHHHhcchhh
Confidence 9877532 11345677778999999999987631 2334443 5678999999999988732 22244557889
Q ss_pred cEEEcccCCCc
Q psy11648 292 NYINLEYNKIS 302 (584)
Q Consensus 292 ~~L~l~~~~l~ 302 (584)
..|++++|++.
T Consensus 301 ~kLnLngN~l~ 311 (382)
T KOG1909|consen 301 EKLNLNGNRLG 311 (382)
T ss_pred HHhcCCccccc
Confidence 99999999883
No 24
>KOG1909|consensus
Probab=99.30 E-value=5.6e-13 Score=121.64 Aligned_cols=187 Identities=21% Similarity=0.241 Sum_probs=121.9
Q ss_pred CCCCCCcEEecCCCCCCCCChhhhccc-ccCCCCceEECCCCccccccccc------------cccccCcccEEEccCCC
Q psy11648 384 VNLPNLVKLDLQDNKLKDFNLNVFSNI-TSKQTPMNLNLSNNYITNLYEND------------KKQAPIYIKSLDLSNNR 450 (584)
Q Consensus 384 ~~~~~L~~L~l~~~~l~~~~~~~~~~~-~~~~~l~~L~l~~~~l~~~~~~~------------~~~~~~~L~~L~l~~~~ 450 (584)
..+|.|+++++|+|.+....+..|..+ ..+..|+.|.+.+|.+....+.. .....+.|++++...|+
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNr 168 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNR 168 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccc
Confidence 344555555555555444333333221 12334455555555444322221 12345788899999888
Q ss_pred CCCCChh----hHHHhhCCCcEEEccCCccccc----CccccCCCcccCeeeccCcccccc----cccccCCCCCccEEE
Q psy11648 451 IQEVPVN----FLQTFADSLRKLYLDFNEIKHL----DATAFGNLDVLELLSLEHNNIAVV----VKRTFIGMPNLQIID 518 (584)
Q Consensus 451 l~~~~~~----~~~~~~~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~ 518 (584)
+.+-+.. .|... +.|+.+.+..|.+... ...+|..|+.|+.||+.+|-++.. ....+..++.|++|+
T Consensus 169 len~ga~~~A~~~~~~-~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~ 247 (382)
T KOG1909|consen 169 LENGGATALAEAFQSH-PTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELN 247 (382)
T ss_pred cccccHHHHHHHHHhc-cccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeec
Confidence 8765543 34444 7888899988877532 335678899999999999987653 345677788899999
Q ss_pred CCCCCCCCcCcccc-----cCCCCccEEEcCCCcCC-----ccCccccCCCCcceEECCCCCC
Q psy11648 519 LSFNEISMLTGEQF-----YFSFKLRILNISHNRLR-----SLPRDVFSNTIIEKLDISYNQD 571 (584)
Q Consensus 519 ls~n~i~~~~~~~~-----~~~~~L~~L~L~~n~l~-----~lp~~l~~~~~L~~l~l~~n~l 571 (584)
+++|.+..-....| ...|+|+.|.+.+|.++ .+..++...+.|+.|+|++|.+
T Consensus 248 l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 248 LGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 99998874333322 24688999999999888 3555667788999999999988
No 25
>KOG3207|consensus
Probab=99.21 E-value=3.7e-12 Score=119.62 Aligned_cols=209 Identities=27% Similarity=0.282 Sum_probs=107.5
Q ss_pred CcCCCEEeccCCCCCccCC-ccCCCCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCCccccccccccccccCc
Q psy11648 362 LNNMLNIVLSFNQIKYIYP-NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440 (584)
Q Consensus 362 ~~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~ 440 (584)
+.+|+.+.++++.+...+. +....|+.++.|+++.|-+....+ ...-+..++.|+.|+++.|.+............+.
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~-v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFP-VLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHH-HHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 3344444444444433211 123344444445544444333211 11111233444444444444443333333333566
Q ss_pred ccEEEccCCCCCCCChh-hHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCccccccc-ccccCCCCCccEEE
Q psy11648 441 IKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV-KRTFIGMPNLQIID 518 (584)
Q Consensus 441 L~~L~l~~~~l~~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~-~~~~~~~~~L~~L~ 518 (584)
++.|.+++|.++.-... ....+ |+|+.|++.+|..-........-+..|++|||++|.+.+.. ......++.|..|+
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~f-Psl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTF-PSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhC-CcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 77777777776622222 23334 77777777777422222222334556777777777665432 12345667777777
Q ss_pred CCCCCCCCcCcccc------cCCCCccEEEcCCCcCCccCc--cccCCCCcceEECCCCCCC
Q psy11648 519 LSFNEISMLTGEQF------YFSFKLRILNISHNRLRSLPR--DVFSNTIIEKLDISYNQDK 572 (584)
Q Consensus 519 ls~n~i~~~~~~~~------~~~~~L~~L~L~~n~l~~lp~--~l~~~~~L~~l~l~~n~l~ 572 (584)
++.+.+..+..... ..+++|++|++..|+++.++. .++.+++|+.+.+-.|.++
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 77777664332222 346777888888877765543 3445567777777777665
No 26
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.16 E-value=2.8e-11 Score=103.92 Aligned_cols=109 Identities=27% Similarity=0.387 Sum_probs=44.1
Q ss_pred chhhhccccccccccccccccc-----ccceeeeecCCceeecCCccccccccceeeEEEecCccccccccccccccccc
Q psy11648 22 VTKLQHLGTTILKGDQLQGIFN-----SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENI 96 (584)
Q Consensus 22 l~~l~~Lr~L~l~~~~l~~l~~-----~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~~l~~~~~~~~~~L 96 (584)
+.....+|.|++.+|.|+.|.. .+|++|++++|+|+.+.. +..+ ++|+ +|++++|+|+.+++.+...+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~l~~--l~~L-~~L~-~L~L~~N~I~~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITKLEG--LPGL-PRLK-TLDLSNNRISSISEGLDKNLPNL 90 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S--TT-------TT---EEE--SS---S-CHHHHHH-TT-
T ss_pred cccccccccccccccccccccchhhhhcCCCEEECCCCCCccccC--ccCh-hhhh-hcccCCCCCCccccchHHhCCcC
Confidence 4566678889999999998755 689999999999999854 7777 8899 99999999999987666666669
Q ss_pred ceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeeccccccccc
Q psy11648 97 EQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDL 154 (584)
Q Consensus 97 ~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~ 154 (584)
+ +|++++|+|..... + ..+..+++|++|++.+|.+...
T Consensus 91 ~--~L~L~~N~I~~l~~-----l-------------~~L~~l~~L~~L~L~~NPv~~~ 128 (175)
T PF14580_consen 91 Q--ELYLSNNKISDLNE-----L-------------EPLSSLPKLRVLSLEGNPVCEK 128 (175)
T ss_dssp ---EEE-TTS---SCCC-----C-------------GGGGG-TT--EEE-TT-GGGGS
T ss_pred C--EEECcCCcCCChHH-----h-------------HHHHcCCCcceeeccCCcccch
Confidence 9 99999999876332 1 1256689999999999988765
No 27
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.11 E-value=5.8e-11 Score=101.96 Aligned_cols=124 Identities=31% Similarity=0.390 Sum_probs=39.6
Q ss_pred cCcccEEEccCCCCCCCChhhHH-HhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccE
Q psy11648 438 PIYIKSLDLSNNRIQEVPVNFLQ-TFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516 (584)
Q Consensus 438 ~~~L~~L~l~~~~l~~~~~~~~~-~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 516 (584)
+..++.|++.+|.++.+. .+. .+ .+|+.|++++|++..+. .+..++.|++|++++|.++.........+|+|++
T Consensus 18 ~~~~~~L~L~~n~I~~Ie--~L~~~l-~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 18 PVKLRELNLRGNQISTIE--NLGATL-DKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT--TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred cccccccccccccccccc--chhhhh-cCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 445677777777766553 232 33 66777777777776553 3556677777777777776543222234677777
Q ss_pred EECCCCCCCCcCc-ccccCCCCccEEEcCCCcCCccCc----cccCCCCcceEEC
Q psy11648 517 IDLSFNEISMLTG-EQFYFSFKLRILNISHNRLRSLPR----DVFSNTIIEKLDI 566 (584)
Q Consensus 517 L~ls~n~i~~~~~-~~~~~~~~L~~L~L~~n~l~~lp~----~l~~~~~L~~l~l 566 (584)
|++++|+|..+.. ..+..+++|+.|++.+|.++.-+. .+..+|+|+.||-
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 7777777664322 334566777777777776664322 3444567776664
No 28
>KOG1259|consensus
Probab=99.11 E-value=2.4e-11 Score=108.52 Aligned_cols=132 Identities=25% Similarity=0.306 Sum_probs=97.0
Q ss_pred cCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEE
Q psy11648 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517 (584)
Q Consensus 438 ~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 517 (584)
+..|+++|+++|.++.+. +...-. +.++.|++++|.+..... +..+++|++||+++|.++... .+-..+.+.+.|
T Consensus 283 Wq~LtelDLS~N~I~~iD-ESvKL~-Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls~~~-Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQID-ESVKLA-PKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLAECV-GWHLKLGNIKTL 357 (490)
T ss_pred Hhhhhhccccccchhhhh-hhhhhc-cceeEEeccccceeeehh--hhhcccceEeecccchhHhhh-hhHhhhcCEeee
Confidence 356788888888887776 344444 888888888888776543 667788888888888776543 234567788888
Q ss_pred ECCCCCCCCcCcccccCCCCccEEEcCCCcCCccC--ccccCCCCcceEECCCCCCCCCCC
Q psy11648 518 DLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP--RDVFSNTIIEKLDISYNQDKIRPG 576 (584)
Q Consensus 518 ~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp--~~l~~~~~L~~l~l~~n~l~~~p~ 576 (584)
.+++|.+..+. .+..+-+|..|++++|+|..+. ..++++|-|+.+.+.+||+..+|+
T Consensus 358 ~La~N~iE~LS--GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 358 KLAQNKIETLS--GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred ehhhhhHhhhh--hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 88888876553 2556778888888888888543 367778888999999998887664
No 29
>KOG3207|consensus
Probab=99.09 E-value=1.6e-11 Score=115.39 Aligned_cols=189 Identities=23% Similarity=0.237 Sum_probs=139.5
Q ss_pred CCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCCccccccccc-cccccCcccEEEccCCCCCCCChhhHHHhh
Q psy11648 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND-KKQAPIYIKSLDLSNNRIQEVPVNFLQTFA 463 (584)
Q Consensus 385 ~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~~l~~~~~~~-~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~ 463 (584)
++.+|+++.++++.+...+.. .....++.++.|++++|-+....... ....+|+|+.|+++.|.+.....+......
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~--~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIE--EYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hHHhhhheeecCccccccchh--hhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 578899999999987665433 22335678999999999877544322 234589999999999987633222222233
Q ss_pred CCCcEEEccCCcccccC-ccccCCCcccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcC-cccccCCCCccEE
Q psy11648 464 DSLRKLYLDFNEIKHLD-ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT-GEQFYFSFKLRIL 541 (584)
Q Consensus 464 ~~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~-~~~~~~~~~L~~L 541 (584)
++|+.|.+++|.++.-. ......+|+|+.|++..|.....-.....-+..|++|||++|++-... ......+|.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 89999999999987332 234567899999999999643333345566889999999999877554 2335678999999
Q ss_pred EcCCCcCCc--cCcc-----ccCCCCcceEECCCCCCCCCC
Q psy11648 542 NISHNRLRS--LPRD-----VFSNTIIEKLDISYNQDKIRP 575 (584)
Q Consensus 542 ~L~~n~l~~--lp~~-----l~~~~~L~~l~l~~n~l~~~p 575 (584)
+++.|.+.+ +|++ ...+++|+.|++..|++...+
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~ 317 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWR 317 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCcccccc
Confidence 999999994 5655 556699999999999996433
No 30
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.94 E-value=7.4e-10 Score=78.08 Aligned_cols=59 Identities=32% Similarity=0.506 Sum_probs=29.0
Q ss_pred ccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCc
Q psy11648 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR 547 (584)
Q Consensus 489 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~ 547 (584)
+|++|++++|.+....+..|..+++|++|++++|+++.++++.|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444444444445555555555555554444445555555555555544
No 31
>KOG1259|consensus
Probab=98.94 E-value=2.8e-10 Score=101.89 Aligned_cols=132 Identities=28% Similarity=0.242 Sum_probs=80.6
Q ss_pred CCCceEECCCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCee
Q psy11648 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELL 493 (584)
Q Consensus 414 ~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 493 (584)
..++.+++++|.++.+...+.. .|.++.|+++.|++..+. .++.+ ++|+.|++++|.+..... +-..+-+.+.|
T Consensus 284 q~LtelDLS~N~I~~iDESvKL--~Pkir~L~lS~N~i~~v~--nLa~L-~~L~~LDLS~N~Ls~~~G-wh~KLGNIKtL 357 (490)
T KOG1259|consen 284 QELTELDLSGNLITQIDESVKL--APKLRRLILSQNRIRTVQ--NLAEL-PQLQLLDLSGNLLAECVG-WHLKLGNIKTL 357 (490)
T ss_pred hhhhhccccccchhhhhhhhhh--ccceeEEeccccceeeeh--hhhhc-ccceEeecccchhHhhhh-hHhhhcCEeee
Confidence 3444555555554444333333 467777777777776554 25555 777777777776654432 22345667777
Q ss_pred eccCcccccccccccCCCCCccEEECCCCCCCCcCc-ccccCCCCccEEEcCCCcCCccCc
Q psy11648 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG-EQFYFSFKLRILNISHNRLRSLPR 553 (584)
Q Consensus 494 ~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~-~~~~~~~~L~~L~L~~n~l~~lp~ 553 (584)
.++.|.+... ..+..+-+|..||+++|+|..... ..++++|.|+++.|-+|.+..+|+
T Consensus 358 ~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 358 KLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred ehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 7777777655 345666777777777777663321 345667777777777777776553
No 32
>KOG0532|consensus
Probab=98.91 E-value=8.4e-11 Score=114.24 Aligned_cols=152 Identities=24% Similarity=0.277 Sum_probs=114.8
Q ss_pred ceEECCCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeecc
Q psy11648 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496 (584)
Q Consensus 417 ~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 496 (584)
..+.+..|.+..++.... .+..|..++++.|++..+|...+ . --|+.|.+++|+++.++.+ ++..+.|..||.+
T Consensus 101 e~liLy~n~~r~ip~~i~--~L~~lt~l~ls~NqlS~lp~~lC-~--lpLkvli~sNNkl~~lp~~-ig~~~tl~~ld~s 174 (722)
T KOG0532|consen 101 ESLILYHNCIRTIPEAIC--NLEALTFLDLSSNQLSHLPDGLC-D--LPLKVLIVSNNKLTSLPEE-IGLLPTLAHLDVS 174 (722)
T ss_pred HHHHHHhccceecchhhh--hhhHHHHhhhccchhhcCChhhh-c--CcceeEEEecCccccCCcc-cccchhHHHhhhh
Confidence 444444444444433322 24677888888888888875433 3 4588888888888876554 4578889999999
Q ss_pred CcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCccCccccCCCCcceEECCCCCCCCCCC
Q psy11648 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPG 576 (584)
Q Consensus 497 ~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~~n~l~~~p~ 576 (584)
.|.+... |..++.+.+|+.|++..|++..++++. . .-.|..||++.|++..||-++..+..|++|.|.+|++.+.|.
T Consensus 175 ~nei~sl-psql~~l~slr~l~vrRn~l~~lp~El-~-~LpLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 175 KNEIQSL-PSQLGYLTSLRDLNVRRNHLEDLPEEL-C-SLPLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred hhhhhhc-hHHhhhHHHHHHHHHhhhhhhhCCHHH-h-CCceeeeecccCceeecchhhhhhhhheeeeeccCCCCCChH
Confidence 9988644 456788889999999999988887764 3 457899999999999999999999999999999999998886
Q ss_pred C
Q psy11648 577 R 577 (584)
Q Consensus 577 ~ 577 (584)
.
T Consensus 252 q 252 (722)
T KOG0532|consen 252 Q 252 (722)
T ss_pred H
Confidence 5
No 33
>KOG0532|consensus
Probab=98.89 E-value=1.3e-10 Score=112.97 Aligned_cols=192 Identities=20% Similarity=0.224 Sum_probs=132.6
Q ss_pred EEEecCcccccccccccccccccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeecccccccc
Q psy11648 74 TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITD 153 (584)
Q Consensus 74 ~L~ls~n~i~~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~ 153 (584)
..|++.|++.++|..+..... |. .+.+.+|.+. .+|..+.++..|++++++.|+++.
T Consensus 79 ~aDlsrNR~~elp~~~~~f~~-Le--~liLy~n~~r--------------------~ip~~i~~L~~lt~l~ls~NqlS~ 135 (722)
T KOG0532|consen 79 FADLSRNRFSELPEEACAFVS-LE--SLILYHNCIR--------------------TIPEAICNLEALTFLDLSSNQLSH 135 (722)
T ss_pred hhhccccccccCchHHHHHHH-HH--HHHHHhccce--------------------ecchhhhhhhHHHHhhhccchhhc
Confidence 466777777777766666555 66 6666666554 456667777888999999988887
Q ss_pred ccccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCcc
Q psy11648 154 LNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNV 233 (584)
Q Consensus 154 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~ 233 (584)
.+.. + +..-|+.|-+++|+++..+. .++....|..||.+.|.+... +.-
T Consensus 136 lp~~-------------------------l--C~lpLkvli~sNNkl~~lp~-~ig~~~tl~~ld~s~nei~sl---psq 184 (722)
T KOG0532|consen 136 LPDG-------------------------L--CDLPLKVLIVSNNKLTSLPE-EIGLLPTLAHLDVSKNEIQSL---PSQ 184 (722)
T ss_pred CChh-------------------------h--hcCcceeEEEecCccccCCc-ccccchhHHHhhhhhhhhhhc---hHH
Confidence 7442 1 34567777888887766544 466677788888888877664 666
Q ss_pred ccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccccccccccCCCCCcEEEcccCCCcccccccccccc
Q psy11648 234 FDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNI 313 (584)
Q Consensus 234 ~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~ 313 (584)
+..+.+|+.|++..|.+. .+|... . .-.|..||++.|++..++. .|.++..|++|.+.+|.+..-|..+...+.
T Consensus 185 l~~l~slr~l~vrRn~l~--~lp~El--~-~LpLi~lDfScNkis~iPv-~fr~m~~Lq~l~LenNPLqSPPAqIC~kGk 258 (722)
T KOG0532|consen 185 LGYLTSLRDLNVRRNHLE--DLPEEL--C-SLPLIRLDFSCNKISYLPV-DFRKMRHLQVLQLENNPLQSPPAQICEKGK 258 (722)
T ss_pred hhhHHHHHHHHHhhhhhh--hCCHHH--h-CCceeeeecccCceeecch-hhhhhhhheeeeeccCCCCCChHHHHhccc
Confidence 777778888888887774 677765 3 4457888888888887765 788888888888888887765555443322
Q ss_pred cCCccEEEcCCC
Q psy11648 314 HKRLKEIRLSNN 325 (584)
Q Consensus 314 ~~~L~~L~l~~~ 325 (584)
..-.++|+...|
T Consensus 259 VHIFKyL~~qA~ 270 (722)
T KOG0532|consen 259 VHIFKYLSTQAC 270 (722)
T ss_pred eeeeeeecchhc
Confidence 334455555555
No 34
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.86 E-value=2.7e-09 Score=75.20 Aligned_cols=61 Identities=34% Similarity=0.554 Sum_probs=48.3
Q ss_pred CCCcEEEccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEEECCCCCC
Q psy11648 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524 (584)
Q Consensus 464 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i 524 (584)
++|++|++++|++..+++..|.++++|++|++++|.+....+..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677788888888777777788888888888888888777777788888888888888764
No 35
>PLN03150 hypothetical protein; Provisional
Probab=98.83 E-value=6.9e-09 Score=109.61 Aligned_cols=107 Identities=21% Similarity=0.273 Sum_probs=74.9
Q ss_pred CcEEEccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCC
Q psy11648 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545 (584)
Q Consensus 466 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~ 545 (584)
++.|+|++|.+.+..+..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+..|+.+..+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 56677777777666666677777777777777777777776777777777777777777776677777777777777777
Q ss_pred CcCC-ccCccccCC-CCcceEECCCCCCC
Q psy11648 546 NRLR-SLPRDVFSN-TIIEKLDISYNQDK 572 (584)
Q Consensus 546 n~l~-~lp~~l~~~-~~L~~l~l~~n~l~ 572 (584)
|+++ .+|..+... .++..+++.+|+..
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccc
Confidence 7776 566665543 45666777777654
No 36
>KOG4658|consensus
Probab=98.80 E-value=6.1e-09 Score=112.35 Aligned_cols=91 Identities=23% Similarity=0.194 Sum_probs=44.0
Q ss_pred CCCcEEEccCCcccccCccccCCCcccCeeeccCcccccc-cccccCCCCCccEEECCCCCCCCcCccc---ccCCCCcc
Q psy11648 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV-VKRTFIGMPNLQIIDLSFNEISMLTGEQ---FYFSFKLR 539 (584)
Q Consensus 464 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~-~~~~~~~~~~L~~L~ls~n~i~~~~~~~---~~~~~~L~ 539 (584)
++|+.|.+..|.....+......+..++++.+..+.+.+. .......++++..+.+++-.+..+..+. +..+|.+.
T Consensus 770 ~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~~~l~~~~ve~~p~l~~~P~~~ 849 (889)
T KOG4658|consen 770 PHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSFLKLEELIVEECPKLGKLPLLS 849 (889)
T ss_pred CcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCccchhheehhcCcccccCcccc
Confidence 5666666665554444333344444444444555544444 2334445555555555443332221111 23456666
Q ss_pred EEEcCCC--cCCccCcc
Q psy11648 540 ILNISHN--RLRSLPRD 554 (584)
Q Consensus 540 ~L~L~~n--~l~~lp~~ 554 (584)
++.+.+| .+..+|+.
T Consensus 850 ~~~i~~~~~~~~~~~~~ 866 (889)
T KOG4658|consen 850 TLTIVGCEEKLKEYPDG 866 (889)
T ss_pred ccceeccccceeecCCc
Confidence 7777775 44455543
No 37
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.79 E-value=9.6e-09 Score=103.69 Aligned_cols=196 Identities=31% Similarity=0.390 Sum_probs=109.9
Q ss_pred EEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCC-CCcEEecCCCCCCCCChhhhcccccCCCCceEEC
Q psy11648 343 TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNL 421 (584)
Q Consensus 343 ~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~-~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l 421 (584)
.+....+.+.... ......+.++.+++.++.++++ +....... +|+.|++++|.+...+ .....++.++.|++
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~~i-~~~~~~~~~nL~~L~l~~N~i~~l~----~~~~~l~~L~~L~l 170 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNITDI-PPLIGLLKSNLKELDLSDNKIESLP----SPLRNLPNLKNLDL 170 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccccC-ccccccchhhcccccccccchhhhh----hhhhcccccccccc
Confidence 4666666653221 2234456778888888888777 33344443 7888888888776652 12224456666666
Q ss_pred CCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccc
Q psy11648 422 SNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501 (584)
Q Consensus 422 ~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 501 (584)
+.|++.+++.... ..+.++.|++++|.+..+|... ... ..|+++.+++|.+... +..+..+.++..+.+.+|.+.
T Consensus 171 ~~N~l~~l~~~~~--~~~~L~~L~ls~N~i~~l~~~~-~~~-~~L~~l~~~~N~~~~~-~~~~~~~~~l~~l~l~~n~~~ 245 (394)
T COG4886 171 SFNDLSDLPKLLS--NLSNLNNLDLSGNKISDLPPEI-ELL-SALEELDLSNNSIIEL-LSSLSNLKNLSGLELSNNKLE 245 (394)
T ss_pred CCchhhhhhhhhh--hhhhhhheeccCCccccCchhh-hhh-hhhhhhhhcCCcceec-chhhhhcccccccccCCceee
Confidence 6666666555431 2456666666666666666322 121 4466666666642222 123445555555666666554
Q ss_pred cccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCccC
Q psy11648 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552 (584)
Q Consensus 502 ~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp 552 (584)
.. +..++.+++++.|++++|.++.+.. +.....++.|+++++.+..++
T Consensus 246 ~~-~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 246 DL-PESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred ec-cchhccccccceecccccccccccc--ccccCccCEEeccCccccccc
Confidence 42 2344555556666666666665544 455566666666666555433
No 38
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.77 E-value=7.3e-09 Score=104.57 Aligned_cols=187 Identities=31% Similarity=0.403 Sum_probs=118.0
Q ss_pred cccCCCccceeccccccccchhhhccccccccccccccccc-----c-cceeeeecCCceeecCCccccccccceeeEEE
Q psy11648 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFN-----S-KLRELEITGKDLKFIDPSAFDNIDACYDLTLK 76 (584)
Q Consensus 3 l~ls~~~~~~~~~~~~~~~l~~l~~Lr~L~l~~~~l~~l~~-----~-~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ 76 (584)
++++.|.+...... +..++.++.|++.++++++++. . +|+.|++++|.+..+. ..+..+ ++|+ .|+
T Consensus 98 l~~~~~~~~~~~~~-----~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~-~~~~~l-~~L~-~L~ 169 (394)
T COG4886 98 LDLNLNRLRSNISE-----LLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLP-SPLRNL-PNLK-NLD 169 (394)
T ss_pred eeccccccccCchh-----hhcccceeEEecCCcccccCccccccchhhcccccccccchhhhh-hhhhcc-cccc-ccc
Confidence 45555555322222 4455667777888887777766 2 7888888888777753 234444 7778 888
Q ss_pred ecCcccccccccccccccccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeeccccccccccc
Q psy11648 77 ITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNG 156 (584)
Q Consensus 77 ls~n~i~~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~~ 156 (584)
+++|++..+|........ |+ .|++++|++..+.. ......+|+++.+++|.+...
T Consensus 170 l~~N~l~~l~~~~~~~~~-L~--~L~ls~N~i~~l~~--------------------~~~~~~~L~~l~~~~N~~~~~-- 224 (394)
T COG4886 170 LSFNDLSDLPKLLSNLSN-LN--NLDLSGNKISDLPP--------------------EIELLSALEELDLSNNSIIEL-- 224 (394)
T ss_pred cCCchhhhhhhhhhhhhh-hh--heeccCCccccCch--------------------hhhhhhhhhhhhhcCCcceec--
Confidence 888888877776655555 77 78888887765433 333445688888888853332
Q ss_pred cccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCccceeecCCccccc
Q psy11648 157 NLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDV 236 (584)
Q Consensus 157 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~ 236 (584)
+..+. .+.++..+.+.++.+... +..++.++.++.|++++|.+..+ +. +..
T Consensus 225 -----------------------~~~~~-~~~~l~~l~l~~n~~~~~-~~~~~~l~~l~~L~~s~n~i~~i---~~-~~~ 275 (394)
T COG4886 225 -----------------------LSSLS-NLKNLSGLELSNNKLEDL-PESIGNLSNLETLDLSNNQISSI---SS-LGS 275 (394)
T ss_pred -----------------------chhhh-hcccccccccCCceeeec-cchhccccccceecccccccccc---cc-ccc
Confidence 11122 556666666666665543 23466667777777777776655 22 666
Q ss_pred cccceEEeecccccC
Q psy11648 237 FEKLQLLEISFSLFN 251 (584)
Q Consensus 237 l~~L~~L~l~~~~~~ 251 (584)
..+++.|+++++.+.
T Consensus 276 ~~~l~~L~~s~n~~~ 290 (394)
T COG4886 276 LTNLRELDLSGNSLS 290 (394)
T ss_pred cCccCEEeccCcccc
Confidence 677777777777665
No 39
>KOG4658|consensus
Probab=98.76 E-value=2.1e-08 Score=108.33 Aligned_cols=128 Identities=22% Similarity=0.225 Sum_probs=68.6
Q ss_pred ccceeeeecCCceeecCCccccccccceeeEEEecCcc--cccccccccccccccceeeeecCCCceeeechhhhccchh
Q psy11648 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQ--IEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVT 121 (584)
Q Consensus 44 ~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~--i~~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~ 121 (584)
..+|...+-+|.+..+....- ++.|+ +|-+.+|. +..++.+.|...+.|+ +|||++|.=
T Consensus 523 ~~~rr~s~~~~~~~~~~~~~~---~~~L~-tLll~~n~~~l~~is~~ff~~m~~Lr--VLDLs~~~~------------- 583 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAGSSE---NPKLR-TLLLQRNSDWLLEISGEFFRSLPLLR--VLDLSGNSS------------- 583 (889)
T ss_pred hheeEEEEeccchhhccCCCC---CCccc-eEEEeecchhhhhcCHHHHhhCcceE--EEECCCCCc-------------
Confidence 455555555555544332221 13466 66666664 5566666666666666 666666421
Q ss_pred cccccCceeccchhhcCCccceeeccccccccccccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCccc
Q psy11648 122 KLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKIT 201 (584)
Q Consensus 122 l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 201 (584)
+..+|..++.+-+|++|+++++.+..++ ..+. ++..|.+|++..+.-.
T Consensus 584 ------l~~LP~~I~~Li~LryL~L~~t~I~~LP-------------------------~~l~-~Lk~L~~Lnl~~~~~l 631 (889)
T KOG4658|consen 584 ------LSKLPSSIGELVHLRYLDLSDTGISHLP-------------------------SGLG-NLKKLIYLNLEVTGRL 631 (889)
T ss_pred ------cCcCChHHhhhhhhhcccccCCCccccc-------------------------hHHH-HHHhhheecccccccc
Confidence 1144555566666666666666666552 2332 4555555665555433
Q ss_pred ccchhhhcCCCCCCEEEcCCC
Q psy11648 202 DLNGNLFRHLYNLQELSLSFN 222 (584)
Q Consensus 202 ~~~~~~~~~~~~L~~L~l~~~ 222 (584)
...+.....+++||+|.+...
T Consensus 632 ~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 632 ESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred ccccchhhhcccccEEEeecc
Confidence 333444444556666655543
No 40
>KOG2120|consensus
Probab=98.75 E-value=1.2e-09 Score=97.96 Aligned_cols=139 Identities=15% Similarity=0.124 Sum_probs=73.2
Q ss_pred cchhhHHHHHhhcCCC-CCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEEEcCCCc-cceeecCCccccc
Q psy11648 159 FRHLQKSIVKAKKNNN-NNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNK-LQIIELNSNVFDV 236 (584)
Q Consensus 159 ~~~~~~~L~~L~l~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~~ 236 (584)
+..+.+.++++||++. ++.-....+-+.|.+|+.|.+.+.++++.+...+++..+|+.++++++. ++.. ...-.+..
T Consensus 180 ~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n-~~~ll~~s 258 (419)
T KOG2120|consen 180 FSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTEN-ALQLLLSS 258 (419)
T ss_pred hhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchh-HHHHHHHh
Confidence 3344456777777733 2222223333457777777777777777666677777777777777653 2211 12234555
Q ss_pred cccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCcccc---ccccccccCCCCCcEEEcccC
Q psy11648 237 FEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIK---NIRNYSLYNLTSLNYINLEYN 299 (584)
Q Consensus 237 l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~---~~~~~~l~~l~~L~~L~l~~~ 299 (584)
++.|..|+++.|....+.+...+. .--++|..|+++|+.-. .-...-...+|+|.+||+++|
T Consensus 259 cs~L~~LNlsWc~l~~~~Vtv~V~-hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~ 323 (419)
T KOG2120|consen 259 CSRLDELNLSWCFLFTEKVTVAVA-HISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDS 323 (419)
T ss_pred hhhHhhcCchHhhccchhhhHHHh-hhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccc
Confidence 666777777766554222222221 23345666666654211 001111234556666666655
No 41
>KOG2120|consensus
Probab=98.72 E-value=6.2e-10 Score=99.62 Aligned_cols=227 Identities=19% Similarity=0.127 Sum_probs=109.0
Q ss_pred ccceeeeecCCceeecCCccccccccceeeEEEecCcccc--cccccccccccccceeeeecCCCceeeechhhhccchh
Q psy11648 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIE--ELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVT 121 (584)
Q Consensus 44 ~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~--~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~ 121 (584)
..-+.+|+.+..|....-..+.. ..+. ++.+...-+. .+.+........++ ++|||...|+... +..
T Consensus 136 ~lW~~lDl~~r~i~p~~l~~l~~--rgV~-v~Rlar~~~~~prlae~~~~frsRlq--~lDLS~s~it~st---l~~--- 204 (419)
T KOG2120|consen 136 SLWQTLDLTGRNIHPDVLGRLLS--RGVI-VFRLARSFMDQPRLAEHFSPFRSRLQ--HLDLSNSVITVST---LHG--- 204 (419)
T ss_pred cceeeeccCCCccChhHHHHHHh--CCeE-EEEcchhhhcCchhhhhhhhhhhhhH--HhhcchhheeHHH---HHH---
Confidence 44555666655555433222222 3344 4444433222 23333333333466 6666665544211 111
Q ss_pred cccccCceeccchhhcCCccceeeccccccccccccccchhhHHHHHhhcC--CCCCCcccchhHhhccCCcEEEcCCCc
Q psy11648 122 KLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKN--NNNNEDQVSDREKLLSNLETLLLRCNK 199 (584)
Q Consensus 122 l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~--~~~~~~~~~~~~~~~~~L~~L~l~~~~ 199 (584)
-++.|++|+.|.+.++++.+.....++. ..+|+.++++ +.++......+...|+.|..|++++|.
T Consensus 205 ------------iLs~C~kLk~lSlEg~~LdD~I~~~iAk-N~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~ 271 (419)
T KOG2120|consen 205 ------------ILSQCSKLKNLSLEGLRLDDPIVNTIAK-NSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCF 271 (419)
T ss_pred ------------HHHHHHhhhhccccccccCcHHHHHHhc-cccceeeccccccccchhHHHHHHHhhhhHhhcCchHhh
Confidence 1344455555555555444322211111 1244555555 333333334444467777777777776
Q ss_pred ccccc-hhhhcC-CCCCCEEEcCCCcc--ceeecCCccccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCc
Q psy11648 200 ITDLN-GNLFRH-LYNLQELSLSFNKL--QIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275 (584)
Q Consensus 200 ~~~~~-~~~~~~-~~~L~~L~l~~~~l--~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~ 275 (584)
+.... ...+.+ -++|+.|+++|++- ... .+......+++|.+|++++|..........+ .+++.|++|.+++|
T Consensus 272 l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~s-h~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~--~kf~~L~~lSlsRC 348 (419)
T KOG2120|consen 272 LFTEKVTVAVAHISETLTQLNLSGYRRNLQKS-HLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF--FKFNYLQHLSLSRC 348 (419)
T ss_pred ccchhhhHHHhhhchhhhhhhhhhhHhhhhhh-HHHHHHHhCCceeeeccccccccCchHHHHH--Hhcchheeeehhhh
Confidence 55321 111111 24677777776531 110 0122345567777777777754323333333 36777777777776
Q ss_pred ccccccc---ccccCCCCCcEEEcccC
Q psy11648 276 NIKNIRN---YSLYNLTSLNYINLEYN 299 (584)
Q Consensus 276 ~l~~~~~---~~l~~l~~L~~L~l~~~ 299 (584)
-.. +| ..+...|.|.+|++.++
T Consensus 349 Y~i--~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 349 YDI--IPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred cCC--ChHHeeeeccCcceEEEEeccc
Confidence 422 11 13566778888887776
No 42
>KOG0531|consensus
Probab=98.61 E-value=6.8e-09 Score=104.83 Aligned_cols=80 Identities=28% Similarity=0.326 Sum_probs=38.1
Q ss_pred cCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCC---ccCcc--ccCCCCcceE
Q psy11648 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR---SLPRD--VFSNTIIEKL 564 (584)
Q Consensus 490 L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~---~lp~~--l~~~~~L~~l 564 (584)
|+.+++++|.+.... ..+..+.++..|++..|++..... +...+.+..+....+++. ...+. ....+.++.+
T Consensus 234 L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (414)
T KOG0531|consen 234 LRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTL 310 (414)
T ss_pred HHHHhcccCcccccc-ccccccccccccchhhcccccccc--ccccchHHHhccCcchhcchhhhhcccccccccccccc
Confidence 555555555554321 234455555555555555544322 233445555555555444 11111 3333555566
Q ss_pred ECCCCCCC
Q psy11648 565 DISYNQDK 572 (584)
Q Consensus 565 ~l~~n~l~ 572 (584)
.+.+|++.
T Consensus 311 ~~~~~~~~ 318 (414)
T KOG0531|consen 311 TLELNPIR 318 (414)
T ss_pred ccccCccc
Confidence 66655554
No 43
>PLN03150 hypothetical protein; Provisional
Probab=98.60 E-value=9.3e-08 Score=101.13 Aligned_cols=112 Identities=21% Similarity=0.291 Sum_probs=95.6
Q ss_pred cccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEEEC
Q psy11648 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519 (584)
Q Consensus 440 ~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l 519 (584)
.++.|++++|.+....+..+..+ ++|+.|+|++|.+.+..+..+..+++|+.|++++|.+.+.+|+.+..+++|+.|++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L-~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKL-RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCC-CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 37789999999874444667777 99999999999999888888999999999999999999999999999999999999
Q ss_pred CCCCCCCcCcccccC-CCCccEEEcCCCc-CCccC
Q psy11648 520 SFNEISMLTGEQFYF-SFKLRILNISHNR-LRSLP 552 (584)
Q Consensus 520 s~n~i~~~~~~~~~~-~~~L~~L~L~~n~-l~~lp 552 (584)
++|++.+..|..+.. ..++..+++.+|. +...|
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999888887765 3467889999985 44444
No 44
>KOG0531|consensus
Probab=98.60 E-value=4.6e-09 Score=106.07 Aligned_cols=220 Identities=29% Similarity=0.306 Sum_probs=148.9
Q ss_pred cCCCCCcEEEccCCcCCCcChhhhccCcCCCEEeccCCCCCccCCccCCCCCCCcEEecCCCCCCCCChhhhcccccCCC
Q psy11648 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT 415 (584)
Q Consensus 336 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~ 415 (584)
..+..++.+++..|.+... ...+..+.++..+++.+|.+..+. ..+..+++|+.|++++|.|+.+.. +..+..
T Consensus 69 ~~l~~l~~l~l~~n~i~~~-~~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i~~-----l~~l~~ 141 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKI-LNHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKLEG-----LSTLTL 141 (414)
T ss_pred HHhHhHHhhccchhhhhhh-hcccccccceeeeeccccchhhcc-cchhhhhcchheeccccccccccc-----hhhccc
Confidence 3455666666777766652 223566788888899988888772 226778889999999998877542 223445
Q ss_pred CceEECCCCccccccccccccccCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeec
Q psy11648 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495 (584)
Q Consensus 416 l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 495 (584)
|+.|++.+|.++.+..... +..|+.+++++|.+..+.......+ .+++.+.+.+|.+..+. .+..+..+..+++
T Consensus 142 L~~L~l~~N~i~~~~~~~~---l~~L~~l~l~~n~i~~ie~~~~~~~-~~l~~l~l~~n~i~~i~--~~~~~~~l~~~~l 215 (414)
T KOG0531|consen 142 LKELNLSGNLISDISGLES---LKSLKLLDLSYNRIVDIENDELSEL-ISLEELDLGGNSIREIE--GLDLLKKLVLLSL 215 (414)
T ss_pred hhhheeccCcchhccCCcc---chhhhcccCCcchhhhhhhhhhhhc-cchHHHhccCCchhccc--chHHHHHHHHhhc
Confidence 7888888888887665443 5788888888888877653113555 78888888888776443 2333445555577
Q ss_pred cCcccccccccccCCCCC--ccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCccCccccCCCCcceEECCCCCCC
Q psy11648 496 EHNNIAVVVKRTFIGMPN--LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572 (584)
Q Consensus 496 ~~n~~~~~~~~~~~~~~~--L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~~n~l~ 572 (584)
..|.+....+ +...+. |+.+++++|++.... +.+..+..+..|++.+|++..+. .+...+.+..+....|++.
T Consensus 216 ~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 216 LDNKISKLEG--LNELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRISNLE-GLERLPKLSELWLNDNKLA 290 (414)
T ss_pred ccccceeccC--cccchhHHHHHHhcccCcccccc-ccccccccccccchhhccccccc-cccccchHHHhccCcchhc
Confidence 7777765422 233333 788888888887653 34566778888888888888664 4555567777777777665
No 45
>KOG4341|consensus
Probab=98.54 E-value=3.6e-09 Score=99.35 Aligned_cols=84 Identities=15% Similarity=0.104 Sum_probs=60.2
Q ss_pred hccccccccccccccccc--------ccceeeeecCCc-eeecCCccccccccceeeEEEecCc-ccc-ccccccccccc
Q psy11648 26 QHLGTTILKGDQLQGIFN--------SKLRELEITGKD-LKFIDPSAFDNIDACYDLTLKITNT-QIE-ELPSGLFDKIE 94 (584)
Q Consensus 26 ~~Lr~L~l~~~~l~~l~~--------~~L~~L~ls~n~-~~~~~~~~~~~~~~~L~~~L~ls~n-~i~-~l~~~~~~~~~ 94 (584)
-.||.|.++|+.-....+ +++++|.+.++. +++.....+...|+.|+ +|++..| .|+ ..-+.+...+.
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~-~l~L~~c~~iT~~~Lk~la~gC~ 216 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLR-HLNLHSCSSITDVSLKYLAEGCR 216 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhh-hhhhcccchhHHHHHHHHHHhhh
Confidence 356777888874333222 999999999884 55555556666689999 9999995 455 33445778888
Q ss_pred ccceeeeecCCCc-eeeec
Q psy11648 95 NIEQMTLDLSHNK-LSVLN 112 (584)
Q Consensus 95 ~L~~~~L~ls~~~-l~~~~ 112 (584)
+|. ++++|.|. |++..
T Consensus 217 kL~--~lNlSwc~qi~~~g 233 (483)
T KOG4341|consen 217 KLK--YLNLSWCPQISGNG 233 (483)
T ss_pred hHH--HhhhccCchhhcCc
Confidence 899 99999995 55533
No 46
>KOG4341|consensus
Probab=98.49 E-value=1.6e-08 Score=95.19 Aligned_cols=261 Identities=16% Similarity=0.059 Sum_probs=131.8
Q ss_pred hcCCccceeecccc-ccccccccccchhhHHHHHhhcCC--CCCCcccchhHhhccCCcEEEcCCCc-ccc-cchhhhcC
Q psy11648 136 KLLSNLETLLLRCN-KITDLNGNLFRHLQKSIVKAKKNN--NNNEDQVSDREKLLSNLETLLLRCNK-ITD-LNGNLFRH 210 (584)
Q Consensus 136 ~~~~~L~~L~l~~n-~i~~~~~~~~~~~~~~L~~L~l~~--~~~~~~~~~~~~~~~~L~~L~l~~~~-~~~-~~~~~~~~ 210 (584)
.+++++++|++.++ .+++..-..++..|+.++.+++.. .+++.....++..|++|+++++++|. +.+ ......++
T Consensus 161 ~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~lNlSwc~qi~~~gv~~~~rG 240 (483)
T KOG4341|consen 161 SNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYLNLSWCPQISGNGVQALQRG 240 (483)
T ss_pred hhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHHHhhhccCchhhcCcchHHhcc
Confidence 34555555555555 333333334444555555555553 22333333444466777777777764 222 12233455
Q ss_pred CCCCCEEEcCCCccceeecCCccccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccc-cccccccc-cCC
Q psy11648 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNI-KNIRNYSL-YNL 288 (584)
Q Consensus 211 ~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l-~~~~~~~l-~~l 288 (584)
+..++.+...||.-.+.+.+...-..+.-+.++++.+|... .....+.....+..|+.++.+++.- +.....++ .++
T Consensus 241 ~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~l-TD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~ 319 (483)
T KOG4341|consen 241 CKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQL-TDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHC 319 (483)
T ss_pred chhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccc-cchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCC
Confidence 66666666665532111101111122233455555555322 1111222224566777777776543 22222222 345
Q ss_pred CCCcEEEcccCC-CcccccccccccccCCccEEEcCCCcccc--cccccccCCCCCcEEEccCCcC-CCcC----hhhhc
Q psy11648 289 TSLNYINLEYNK-ISKIHNNLFHFNIHKRLKEIRLSNNYLEL--IESDTFYNLKELNTITLSYNLL-KSIK----TTSFK 360 (584)
Q Consensus 289 ~~L~~L~l~~~~-l~~i~~~~~~~~~~~~L~~L~l~~~~~~~--~~~~~l~~~~~L~~L~l~~~~~-~~~~----~~~~~ 360 (584)
++|+.+-+++|+ ++...-.... ..++.|+.+++.++.... .....-.+|+.|+.+.++.|.. +... ...-.
T Consensus 320 ~~L~~l~l~~c~~fsd~~ft~l~-rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c 398 (483)
T KOG4341|consen 320 HNLQVLELSGCQQFSDRGFTMLG-RNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSC 398 (483)
T ss_pred CceEEEeccccchhhhhhhhhhh-cCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccc
Confidence 677777777764 2222111111 126677777777664332 1222235678888888887743 3221 11113
Q ss_pred cCcCCCEEeccCCCCC-ccCCccCCCCCCCcEEecCCCC
Q psy11648 361 NLNNMLNIVLSFNQIK-YIYPNAFVNLPNLVKLDLQDNK 398 (584)
Q Consensus 361 ~~~~L~~L~l~~~~~~-~~~~~~~~~~~~L~~L~l~~~~ 398 (584)
....+..+.++++... +...+.+..++.|+.+++.+++
T Consensus 399 ~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 399 SLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred cccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 4567888888887744 3334556678889888888876
No 47
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.41 E-value=2.1e-08 Score=88.86 Aligned_cols=199 Identities=16% Similarity=0.150 Sum_probs=110.6
Q ss_pred cchhhhcccccccccccccc-----ccc-----ccceeeeecCCceeecC---C-------ccccccccceeeEEEecCc
Q psy11648 21 NVTKLQHLGTTILKGDQLQG-----IFN-----SKLRELEITGKDLKFID---P-------SAFDNIDACYDLTLKITNT 80 (584)
Q Consensus 21 ~l~~l~~Lr~L~l~~~~l~~-----l~~-----~~L~~L~ls~n~~~~~~---~-------~~~~~~~~~L~~~L~ls~n 80 (584)
.+..+..+..+++|||.|.. +.. .+|+..++|+-...... . .++.+ |++|+ .++||.|
T Consensus 25 el~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlk-cp~l~-~v~LSDN 102 (388)
T COG5238 25 ELEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLK-CPRLQ-KVDLSDN 102 (388)
T ss_pred HHHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhc-CCcce-eeecccc
Confidence 34556677777888887764 111 67777777654222211 1 22333 48888 8999988
Q ss_pred ccc-ccc----ccccccccccceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeecccccccccc
Q psy11648 81 QIE-ELP----SGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLN 155 (584)
Q Consensus 81 ~i~-~l~----~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~ 155 (584)
.++ ..| ..+.+... |. ||.+++|-+.......++.....+.. -......+.|++.....|++..-+
T Consensus 103 Afg~~~~e~L~d~is~~t~-l~--HL~l~NnGlGp~aG~rigkal~~la~------nKKaa~kp~Le~vicgrNRlengs 173 (388)
T COG5238 103 AFGSEFPEELGDLISSSTD-LV--HLKLNNNGLGPIAGGRIGKALFHLAY------NKKAADKPKLEVVICGRNRLENGS 173 (388)
T ss_pred ccCcccchHHHHHHhcCCC-ce--eEEeecCCCCccchhHHHHHHHHHHH------HhhhccCCCceEEEeccchhccCc
Confidence 877 222 23344444 88 88888886654444433321111100 012334567888888888776653
Q ss_pred ccccchhhHHHHHhhcCCCCCCcccchhHhhccCCcEEEcCCCccccc-----chhhhcCCCCCCEEEcCCCcccee--e
Q psy11648 156 GNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDL-----NGNLFRHLYNLQELSLSFNKLQII--E 228 (584)
Q Consensus 156 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~-----~~~~~~~~~~L~~L~l~~~~l~~~--~ 228 (584)
...++.. +. .-.+|+.+.+..|.|... ....+..+++|+.||+.+|.++.. .
T Consensus 174 ~~~~a~~--------------------l~-sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~ 232 (388)
T COG5238 174 KELSAAL--------------------LE-SHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSR 232 (388)
T ss_pred HHHHHHH--------------------HH-hhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHH
Confidence 3322221 11 225777777777776532 112234567788888887766532 1
Q ss_pred cCCccccccccceEEeecccccC
Q psy11648 229 LNSNVFDVFEKLQLLEISFSLFN 251 (584)
Q Consensus 229 ~~~~~~~~l~~L~~L~l~~~~~~ 251 (584)
....++..++.|+.|.+.+|.+.
T Consensus 233 ~La~al~~W~~lrEL~lnDClls 255 (388)
T COG5238 233 YLADALCEWNLLRELRLNDCLLS 255 (388)
T ss_pred HHHHHhcccchhhhccccchhhc
Confidence 12233444556666666666554
No 48
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.36 E-value=3.1e-07 Score=58.92 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=22.7
Q ss_pred CccEEEcCCCcCCccCccccCCCCcceEECCCCCCCCCC
Q psy11648 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575 (584)
Q Consensus 537 ~L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~~n~l~~~p 575 (584)
+|++|++++|+|+.+|..+..+++|+.|++++|++++++
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBEG
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCCc
Confidence 456666666666666655666666666666666666544
No 49
>KOG1859|consensus
Probab=98.26 E-value=2.8e-08 Score=99.81 Aligned_cols=183 Identities=22% Similarity=0.271 Sum_probs=120.7
Q ss_pred cchhhcCCccceeeccccccccccccccchhhHHHHHhhcCCCCCCcc---c---chhHh--hccCCcEEEcCCCccccc
Q psy11648 132 KDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQ---V---SDREK--LLSNLETLLLRCNKITDL 203 (584)
Q Consensus 132 ~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~---~---~~~~~--~~~~L~~L~l~~~~~~~~ 203 (584)
|-.+..+++|++|.+.++.+... ..+..+...|+.|...+...... . ..+.. ..-.|...++++|.+...
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~m 179 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLVLM 179 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHHhH
Confidence 44566789999999999987663 22334444666666653322110 0 00000 113566777777776543
Q ss_pred chhhhcCCCCCCEEEcCCCccceeecCCccccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccccccc
Q psy11648 204 NGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNY 283 (584)
Q Consensus 204 ~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~ 283 (584)
.++++-++.++.|+|++|+++.. +.+..+++|++|++++|.+. .+|..-. .+|. |+.|.+++|.++.+.
T Consensus 180 -D~SLqll~ale~LnLshNk~~~v----~~Lr~l~~LkhLDlsyN~L~--~vp~l~~-~gc~-L~~L~lrnN~l~tL~-- 248 (1096)
T KOG1859|consen 180 -DESLQLLPALESLNLSHNKFTKV----DNLRRLPKLKHLDLSYNCLR--HVPQLSM-VGCK-LQLLNLRNNALTTLR-- 248 (1096)
T ss_pred -HHHHHHHHHhhhhccchhhhhhh----HHHHhcccccccccccchhc--cccccch-hhhh-heeeeecccHHHhhh--
Confidence 34677778899999999988765 47888899999999999875 5554432 3454 899999999888765
Q ss_pred cccCCCCCcEEEcccCCCcccccccccccccCCccEEEcCCCccc
Q psy11648 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328 (584)
Q Consensus 284 ~l~~l~~L~~L~l~~~~l~~i~~~~~~~~~~~~L~~L~l~~~~~~ 328 (584)
.+.++.+|+.||+++|-+.+.....+-. .+..|+.|++.+|.+.
T Consensus 249 gie~LksL~~LDlsyNll~~hseL~pLw-sLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 249 GIENLKSLYGLDLSYNLLSEHSELEPLW-SLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hHHhhhhhhccchhHhhhhcchhhhHHH-HHHHHHHHhhcCCccc
Confidence 4778888999999998766432211110 1667888888888654
No 50
>KOG1859|consensus
Probab=98.25 E-value=5.9e-08 Score=97.49 Aligned_cols=129 Identities=19% Similarity=0.175 Sum_probs=86.4
Q ss_pred CccceeeccccccccccccccchhhHHHHHhhcC-CCCCCcccchhHhhccCCcEEEcCCCcccccchhhhcCCCCCCEE
Q psy11648 139 SNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKN-NNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQEL 217 (584)
Q Consensus 139 ~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~-~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 217 (584)
..|.+.+.+.|++..++. --.+.+.++.|+|+ |...... .+. .+++|++||+++|.+...+.-...+|+ |+.|
T Consensus 164 n~L~~a~fsyN~L~~mD~--SLqll~ale~LnLshNk~~~v~--~Lr-~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L 237 (1096)
T KOG1859|consen 164 NKLATASFSYNRLVLMDE--SLQLLPALESLNLSHNKFTKVD--NLR-RLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLL 237 (1096)
T ss_pred hhHhhhhcchhhHHhHHH--HHHHHHHhhhhccchhhhhhhH--HHH-hcccccccccccchhccccccchhhhh-heee
Confidence 357777777776665532 22455677777777 5555543 443 788899999998888766554444555 8888
Q ss_pred EcCCCccceeecCCccccccccceEEeecccccCCCCchhhHhhhcCCCCCEEEccCccccc
Q psy11648 218 SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKN 279 (584)
Q Consensus 218 ~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~~ 279 (584)
.+++|.++.. ..+.++++|+.|++++|-+. ......+...+..|+.|.+.+|.+..
T Consensus 238 ~lrnN~l~tL----~gie~LksL~~LDlsyNll~--~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 238 NLRNNALTTL----RGIENLKSLYGLDLSYNLLS--EHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred eecccHHHhh----hhHHhhhhhhccchhHhhhh--cchhhhHHHHHHHHHHHhhcCCcccc
Confidence 8888887755 45677888888888888765 22211111456778888888887653
No 51
>KOG2982|consensus
Probab=98.21 E-value=6.2e-07 Score=80.81 Aligned_cols=92 Identities=21% Similarity=0.221 Sum_probs=60.1
Q ss_pred hhHhhccCCcEEEcCCCcccc--cchhhhcCCCCCCEEEcCCCccceeecCCccc-cccccceEEeecccccCCCCchhh
Q psy11648 182 DREKLLSNLETLLLRCNKITD--LNGNLFRHLYNLQELSLSFNKLQIIELNSNVF-DVFEKLQLLEISFSLFNSNEFPYY 258 (584)
Q Consensus 182 ~~~~~~~~L~~L~l~~~~~~~--~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~-~~l~~L~~L~l~~~~~~~~~l~~~ 258 (584)
.|+..++.++.+++.+|.+.. .+...+.++|.|+.|+++.|.+... + ..+ ....+|+.|.+.+..+.+......
T Consensus 65 ~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~--I-~~lp~p~~nl~~lVLNgT~L~w~~~~s~ 141 (418)
T KOG2982|consen 65 LFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSD--I-KSLPLPLKNLRVLVLNGTGLSWTQSTSS 141 (418)
T ss_pred HHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCc--c-ccCcccccceEEEEEcCCCCChhhhhhh
Confidence 444467788888888887764 2344567888888888888877543 1 112 345678888888877764333333
Q ss_pred HhhhcCCCCCEEEccCcccc
Q psy11648 259 ILNKNLNTLEWLAMDNNNIK 278 (584)
Q Consensus 259 ~~~~~~~~L~~L~l~~~~l~ 278 (584)
. ..+|.+++|.++.|++.
T Consensus 142 l--~~lP~vtelHmS~N~~r 159 (418)
T KOG2982|consen 142 L--DDLPKVTELHMSDNSLR 159 (418)
T ss_pred h--hcchhhhhhhhccchhh
Confidence 3 67777777777776433
No 52
>KOG4579|consensus
Probab=98.20 E-value=6.8e-08 Score=76.55 Aligned_cols=130 Identities=21% Similarity=0.242 Sum_probs=84.3
Q ss_pred cccEEEccCCCCCCCChhh--HHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEE
Q psy11648 440 YIKSLDLSNNRIQEVPVNF--LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517 (584)
Q Consensus 440 ~L~~L~l~~~~l~~~~~~~--~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 517 (584)
.+..++++.|++..++... +... ..|+..++++|.+...++..-..++..+.+++++|.+.+. |+.+..++.|+.|
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~-~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdv-PeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKG-YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDV-PEELAAMPALRSL 105 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCC-ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhc-hHHHhhhHHhhhc
Confidence 3456777788776555322 2222 5566678888877776665555566777777777777644 4447777777777
Q ss_pred ECCCCCCCCcCcccccCCCCccEEEcCCCcCCccCccccCCCCcceEECCCCCCC
Q psy11648 518 DLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572 (584)
Q Consensus 518 ~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp~~l~~~~~L~~l~l~~n~l~ 572 (584)
+++.|.+...+ +.+..+.+|-.|+..+|.+-.||..++.-+..-.+++.++++.
T Consensus 106 Nl~~N~l~~~p-~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~ 159 (177)
T KOG4579|consen 106 NLRFNPLNAEP-RVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLG 159 (177)
T ss_pred ccccCccccch-HHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCccc
Confidence 77777776553 3344466777777777777777776555455555566666665
No 53
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.16 E-value=3.2e-07 Score=81.48 Aligned_cols=116 Identities=15% Similarity=0.033 Sum_probs=60.7
Q ss_pred ccceEEeecccccCCCCchhhHh--hhcCCCCCEEEccCcccccc----ccccccCCCCCcEEEcccCCCcccccc----
Q psy11648 238 EKLQLLEISFSLFNSNEFPYYIL--NKNLNTLEWLAMDNNNIKNI----RNYSLYNLTSLNYINLEYNKISKIHNN---- 307 (584)
Q Consensus 238 ~~L~~L~l~~~~~~~~~l~~~~~--~~~~~~L~~L~l~~~~l~~~----~~~~l~~l~~L~~L~l~~~~l~~i~~~---- 307 (584)
..|+.+.+.+|.+....+...++ ...+.+|+.||+..|.++.. ...++...+.|+.|.+.+|-++.-+..
T Consensus 185 ~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~ 264 (388)
T COG5238 185 ENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLR 264 (388)
T ss_pred cCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHH
Confidence 35555555555554222211111 03566777777777766622 223455556677777777765522211
Q ss_pred cccccccCCccEEEcCCCcccccc------cc-cccCCCCCcEEEccCCcCCC
Q psy11648 308 LFHFNIHKRLKEIRLSNNYLELIE------SD-TFYNLKELNTITLSYNLLKS 353 (584)
Q Consensus 308 ~~~~~~~~~L~~L~l~~~~~~~~~------~~-~l~~~~~L~~L~l~~~~~~~ 353 (584)
.|...-.|+|..|...+|.+..-. +. .=..++-|..+.+.+|.+..
T Consensus 265 ~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 265 RFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred HhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchh
Confidence 111122567777777766544311 11 11345667777888888764
No 54
>KOG4579|consensus
Probab=98.16 E-value=2.5e-07 Score=73.40 Aligned_cols=122 Identities=20% Similarity=0.202 Sum_probs=78.9
Q ss_pred hhhccccccccccccccccc--------ccceeeeecCCceeecCCccccccccceeeEEEecCcccccccccccccccc
Q psy11648 24 KLQHLGTTILKGDQLQGIFN--------SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIEN 95 (584)
Q Consensus 24 ~l~~Lr~L~l~~~~l~~l~~--------~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~~l~~~~~~~~~~ 95 (584)
.-+.+..++++.+++-.++. .+|+..++++|.+++....--... +.++ ++++++|.|..+|.++.....
T Consensus 25 dakE~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf-~t~t-~lNl~~neisdvPeE~Aam~a- 101 (177)
T KOG4579|consen 25 DAKELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKF-PTAT-TLNLANNEISDVPEELAAMPA- 101 (177)
T ss_pred HHHHhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhcc-chhh-hhhcchhhhhhchHHHhhhHH-
Confidence 33455566777776665443 667777777777776544333332 5677 777777777777777555555
Q ss_pred cceeeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceeeccccccccccccccchhhHHHHHhh
Q psy11648 96 IEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAK 170 (584)
Q Consensus 96 L~~~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~ 170 (584)
|+ .|+++.|.+. ..|..+..+.++-.|+..+|.+.+++.+.|.+..+.+..+.
T Consensus 102 Lr--~lNl~~N~l~--------------------~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lg 154 (177)
T KOG4579|consen 102 LR--SLNLRFNPLN--------------------AEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLG 154 (177)
T ss_pred hh--hcccccCccc--------------------cchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhc
Confidence 77 7777777665 23344444677888888888888877766655555555443
No 55
>KOG2982|consensus
Probab=98.11 E-value=4.4e-07 Score=81.72 Aligned_cols=62 Identities=24% Similarity=0.186 Sum_probs=26.1
Q ss_pred CCCcEEEcccCCCccccc--ccccccccCCccEEEcCCCcccccccccccCCCCCcEEEccCCcCC
Q psy11648 289 TSLNYINLEYNKISKIHN--NLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352 (584)
Q Consensus 289 ~~L~~L~l~~~~l~~i~~--~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~ 352 (584)
+.++.+|+.+|.++.-.. .+... +|.|++|+++.|++.......-....+|+.+.+.|..+.
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~--lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~ 134 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQ--LPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLS 134 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhc--CccceEeeccCCcCCCccccCcccccceEEEEEcCCCCC
Confidence 345555555555542111 11122 555555555555544322211122344455555544443
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.06 E-value=4e-06 Score=53.75 Aligned_cols=40 Identities=33% Similarity=0.400 Sum_probs=24.6
Q ss_pred CCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCccC
Q psy11648 512 PNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552 (584)
Q Consensus 512 ~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp 552 (584)
++|++|++++|+|+++++ .+..+++|+.|++++|+++.++
T Consensus 1 ~~L~~L~l~~N~i~~l~~-~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPP-ELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp TT-SEEEETSSS-SSHGG-HGTTCTTSSEEEETSSCCSBEG
T ss_pred CcceEEEccCCCCcccCc-hHhCCCCCCEEEecCCCCCCCc
Confidence 356667777777666654 3566777777777777766554
No 57
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.06 E-value=7.2e-06 Score=68.14 Aligned_cols=102 Identities=24% Similarity=0.377 Sum_probs=37.6
Q ss_pred cCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEE
Q psy11648 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517 (584)
Q Consensus 438 ~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 517 (584)
+++|+.+.+.. .+..++...|.++ ++++.+.+..+ +..+...+|.++++++.+.+.+ .+.......|..+++|+.+
T Consensus 11 ~~~l~~i~~~~-~~~~I~~~~F~~~-~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i 86 (129)
T PF13306_consen 11 CSNLESITFPN-TIKKIGENAFSNC-TSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNI 86 (129)
T ss_dssp -TT--EEEETS-T--EE-TTTTTT--TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEE
T ss_pred CCCCCEEEECC-CeeEeChhhcccc-ccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccccccc
Confidence 44555555543 3444444445444 45555555442 4444444455554455555543 2222223344445555555
Q ss_pred ECCCCCCCCcCcccccCCCCccEEEcCC
Q psy11648 518 DLSFNEISMLTGEQFYFSFKLRILNISH 545 (584)
Q Consensus 518 ~ls~n~i~~~~~~~~~~~~~L~~L~L~~ 545 (584)
++..+ +..+....|.++ .|+.+.+.+
T Consensus 87 ~~~~~-~~~i~~~~f~~~-~l~~i~~~~ 112 (129)
T PF13306_consen 87 DIPSN-ITEIGSSSFSNC-NLKEINIPS 112 (129)
T ss_dssp EETTT--BEEHTTTTTT--T--EEE-TT
T ss_pred ccCcc-ccEEchhhhcCC-CceEEEECC
Confidence 54432 334444444444 444444443
No 58
>KOG1644|consensus
Probab=98.03 E-value=7.3e-06 Score=69.93 Aligned_cols=103 Identities=23% Similarity=0.268 Sum_probs=73.9
Q ss_pred CCCcEEEccCCcccccCccccCCCcccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCc-ccccCCCCccEEE
Q psy11648 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG-EQFYFSFKLRILN 542 (584)
Q Consensus 464 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~-~~~~~~~~L~~L~ 542 (584)
.+...++++.|++..+. .|..++.|.+|.+.+|.|+.+.|..-.-+++|+.|.+.+|.|..+.. +.+..||+|++|.
T Consensus 42 d~~d~iDLtdNdl~~l~--~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKLD--NLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchhhcc--cCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 56677888888776543 46778888888888888888777666667888888888887763221 2256788888888
Q ss_pred cCCCcCCccC----ccccCCCCcceEECCC
Q psy11648 543 ISHNRLRSLP----RDVFSNTIIEKLDISY 568 (584)
Q Consensus 543 L~~n~l~~lp----~~l~~~~~L~~l~l~~ 568 (584)
+-+|.++.-. ..+..+|+|+.||.++
T Consensus 120 ll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 120 LLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred ecCCchhcccCceeEEEEecCcceEeehhh
Confidence 8888777432 2455668888888764
No 59
>KOG1644|consensus
Probab=97.97 E-value=8.5e-06 Score=69.53 Aligned_cols=127 Identities=23% Similarity=0.245 Sum_probs=92.3
Q ss_pred ccccccccccccccc-----ccceeeeecCCceeecCCccccccccceeeEEEecCcccccccccccccccccceeeeec
Q psy11648 29 GTTILKGDQLQGIFN-----SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL 103 (584)
Q Consensus 29 r~L~l~~~~l~~l~~-----~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~~l~~~~~~~~~~L~~~~L~l 103 (584)
|.+++.+.++..+.. .+...+|+++|.+-.... |..+ +.|. +|.+.+|+|+.|.+.+.....+|. .|.+
T Consensus 22 ~e~~LR~lkip~ienlg~~~d~~d~iDLtdNdl~~l~~--lp~l-~rL~-tLll~nNrIt~I~p~L~~~~p~l~--~L~L 95 (233)
T KOG1644|consen 22 RELDLRGLKIPVIENLGATLDQFDAIDLTDNDLRKLDN--LPHL-PRLH-TLLLNNNRITRIDPDLDTFLPNLK--TLIL 95 (233)
T ss_pred cccccccccccchhhccccccccceecccccchhhccc--CCCc-cccc-eEEecCCcceeeccchhhhccccc--eEEe
Confidence 445777776665443 677888999998877644 7676 7899 999999999999998888888899 9999
Q ss_pred CCCceeeechhhhccchhcccccCceeccchhhcCCccceeeccccccccccccccchhhHHHHHhhcCCCCCCcccchh
Q psy11648 104 SHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDR 183 (584)
Q Consensus 104 s~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 183 (584)
.+|.|.... .+ ..+..|++|++|.+-+|.+.+....... -+
T Consensus 96 tnNsi~~l~-----dl-------------~pLa~~p~L~~Ltll~Npv~~k~~YR~y---------------------vl 136 (233)
T KOG1644|consen 96 TNNSIQELG-----DL-------------DPLASCPKLEYLTLLGNPVEHKKNYRLY---------------------VL 136 (233)
T ss_pred cCcchhhhh-----hc-------------chhccCCccceeeecCCchhcccCceeE---------------------EE
Confidence 999876422 22 1256678999999999987776432111 11
Q ss_pred HhhccCCcEEEcCCCccc
Q psy11648 184 EKLLSNLETLLLRCNKIT 201 (584)
Q Consensus 184 ~~~~~~L~~L~l~~~~~~ 201 (584)
..+|+|+.||++.....
T Consensus 137 -~klp~l~~LDF~kVt~~ 153 (233)
T KOG1644|consen 137 -YKLPSLRTLDFQKVTRK 153 (233)
T ss_pred -EecCcceEeehhhhhHH
Confidence 15789999998876544
No 60
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.86 E-value=3.6e-05 Score=63.91 Aligned_cols=34 Identities=38% Similarity=0.467 Sum_probs=10.2
Q ss_pred cCCCCCEEEccCccccccccccccCCCCCcEEEcc
Q psy11648 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLE 297 (584)
Q Consensus 263 ~~~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~ 297 (584)
.+++|+.+.+.. .+..+...+|..+++|+.+.+.
T Consensus 10 ~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~ 43 (129)
T PF13306_consen 10 NCSNLESITFPN-TIKKIGENAFSNCTSLKSINFP 43 (129)
T ss_dssp T-TT--EEEETS-T--EE-TTTTTT-TT-SEEEES
T ss_pred CCCCCCEEEECC-CeeEeChhhccccccccccccc
Confidence 333444444432 2333333334444444444443
No 61
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.75 E-value=0.00012 Score=71.21 Aligned_cols=137 Identities=15% Similarity=0.209 Sum_probs=87.9
Q ss_pred ccccCCCCceEECCCCccccccccccccccCcccEEEccCCC-CCCCChhhHHHhhCCCcEEEccCC-cccccCccccCC
Q psy11648 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR-IQEVPVNFLQTFADSLRKLYLDFN-EIKHLDATAFGN 486 (584)
Q Consensus 409 ~~~~~~~l~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~l~~ 486 (584)
.+..+.++..|++++|.++.++. .+++|+.|.+++|. ++.+|. . +|++|++|++++| .+..++
T Consensus 47 r~~~~~~l~~L~Is~c~L~sLP~-----LP~sLtsL~Lsnc~nLtsLP~-~---LP~nLe~L~Ls~Cs~L~sLP------ 111 (426)
T PRK15386 47 QIEEARASGRLYIKDCDIESLPV-----LPNELTEITIENCNNLTTLPG-S---IPEGLEKLTVCHCPEISGLP------ 111 (426)
T ss_pred HHHHhcCCCEEEeCCCCCcccCC-----CCCCCcEEEccCCCCcccCCc-h---hhhhhhheEccCcccccccc------
Confidence 33345788999999999888872 25689999998854 666663 2 3478999999998 554332
Q ss_pred CcccCeeeccCcccccccccccCCC-CCccEEECCCCC-CCCc-CcccccCCCCccEEEcCCCcCCccCccccCCCCcce
Q psy11648 487 LDVLELLSLEHNNIAVVVKRTFIGM-PNLQIIDLSFNE-ISML-TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563 (584)
Q Consensus 487 l~~L~~L~l~~n~~~~~~~~~~~~~-~~L~~L~ls~n~-i~~~-~~~~~~~~~~L~~L~L~~n~l~~lp~~l~~~~~L~~ 563 (584)
.+|+.|++.++..... ..+ ++|+.|.+.+++ .... .+..+ .++|++|++++|....+|..+- .+|+.
T Consensus 112 -~sLe~L~L~~n~~~~L-----~~LPssLk~L~I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i~LP~~LP--~SLk~ 181 (426)
T PRK15386 112 -ESVRSLEIKGSATDSI-----KNVPNGLTSLSINSYNPENQARIDNLI--SPSLKTLSLTGCSNIILPEKLP--ESLQS 181 (426)
T ss_pred -cccceEEeCCCCCccc-----ccCcchHhheecccccccccccccccc--CCcccEEEecCCCcccCccccc--ccCcE
Confidence 4578888876554321 222 356777775432 1111 11111 2578888888887666664433 58888
Q ss_pred EECCCCC
Q psy11648 564 LDISYNQ 570 (584)
Q Consensus 564 l~l~~n~ 570 (584)
|+++.|.
T Consensus 182 L~ls~n~ 188 (426)
T PRK15386 182 ITLHIEQ 188 (426)
T ss_pred EEecccc
Confidence 8887763
No 62
>KOG3665|consensus
Probab=97.68 E-value=4.9e-05 Score=80.50 Aligned_cols=114 Identities=18% Similarity=0.213 Sum_probs=66.9
Q ss_pred hHhhccCCcEEEcCCCccccc-chhhhcCCCCCCEEEcCCCccceeecCCccccccccceEEeecccccCCCCchhhHhh
Q psy11648 183 REKLLSNLETLLLRCNKITDL-NGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILN 261 (584)
Q Consensus 183 ~~~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~l~~~~~~ 261 (584)
++..+|.|+.|.+.+..+... ......++++|..||+|++.+... ..++.+++|+.|.+.+-.+....--..+|
T Consensus 143 ig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl----~GIS~LknLq~L~mrnLe~e~~~~l~~LF- 217 (699)
T KOG3665|consen 143 IGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL----SGISRLKNLQVLSMRNLEFESYQDLIDLF- 217 (699)
T ss_pred HhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc----HHHhccccHHHHhccCCCCCchhhHHHHh-
Confidence 333577777777777665432 223455777777777777776644 45666777777777766554212223333
Q ss_pred hcCCCCCEEEccCccccccc------cccccCCCCCcEEEcccCCCc
Q psy11648 262 KNLNTLEWLAMDNNNIKNIR------NYSLYNLTSLNYINLEYNKIS 302 (584)
Q Consensus 262 ~~~~~L~~L~l~~~~l~~~~------~~~l~~l~~L~~L~l~~~~l~ 302 (584)
.+++|+.||+|........ -+.-..+|.|+.||.|++.+.
T Consensus 218 -~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 218 -NLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred -cccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 6777777777765433211 112233667777777766554
No 63
>KOG3665|consensus
Probab=97.60 E-value=3.8e-05 Score=81.32 Aligned_cols=151 Identities=19% Similarity=0.226 Sum_probs=86.8
Q ss_pred CCCCceEECCCCccc-cccccccccccCcccEEEccCCCCCCCC-hhhHHHhhCCCcEEEccCCcccccCccccCCCccc
Q psy11648 413 KQTPMNLNLSNNYIT-NLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490 (584)
Q Consensus 413 ~~~l~~L~l~~~~l~-~~~~~~~~~~~~~L~~L~l~~~~l~~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L 490 (584)
..+|+.|++++...- ..........+|+|+.|.+++-.+..-. ...+..+ ++|..||+++.+++.+ .+++.+++|
T Consensus 121 r~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sF-pNL~sLDIS~TnI~nl--~GIS~LknL 197 (699)
T KOG3665|consen 121 RQNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASF-PNLRSLDISGTNISNL--SGISRLKNL 197 (699)
T ss_pred HHhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhcc-CccceeecCCCCccCc--HHHhccccH
Confidence 346777888765322 2222223345778888888776554211 1334445 7788888888777665 456677778
Q ss_pred CeeeccCccccc-ccccccCCCCCccEEECCCCCCCCcC---c---ccccCCCCccEEEcCCCcCCc--cCccccCCCCc
Q psy11648 491 ELLSLEHNNIAV-VVKRTFIGMPNLQIIDLSFNEISMLT---G---EQFYFSFKLRILNISHNRLRS--LPRDVFSNTII 561 (584)
Q Consensus 491 ~~L~l~~n~~~~-~~~~~~~~~~~L~~L~ls~n~i~~~~---~---~~~~~~~~L~~L~L~~n~l~~--lp~~l~~~~~L 561 (584)
+.|.+.+-.+.. ..-..+-++.+|+.||+|..+..... . +....+|.|+.||.+++.+.. +..-+..-|+|
T Consensus 198 q~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L 277 (699)
T KOG3665|consen 198 QVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNL 277 (699)
T ss_pred HHHhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccH
Confidence 877777755543 22223456778888888765433221 1 122346777777777776662 33233333566
Q ss_pred ceEEC
Q psy11648 562 EKLDI 566 (584)
Q Consensus 562 ~~l~l 566 (584)
+.+.+
T Consensus 278 ~~i~~ 282 (699)
T KOG3665|consen 278 QQIAA 282 (699)
T ss_pred hhhhh
Confidence 65553
No 64
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.55 E-value=0.00053 Score=66.96 Aligned_cols=92 Identities=12% Similarity=0.196 Sum_probs=49.3
Q ss_pred hccCcCCCEEeccCCCCCccCCccCCCCCCCcEEecCCCCCCCCChhhhcccccCCCCceEECCCC-ccccccccccccc
Q psy11648 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN-YITNLYENDKKQA 437 (584)
Q Consensus 359 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~~~-~l~~~~~~~~~~~ 437 (584)
+..+..++.|++++|.++.+ |. -.++|++|.+++|.--...+..+ ...|+.|++++| .+..+
T Consensus 48 ~~~~~~l~~L~Is~c~L~sL-P~---LP~sLtsL~Lsnc~nLtsLP~~L-----P~nLe~L~Ls~Cs~L~sL-------- 110 (426)
T PRK15386 48 IEEARASGRLYIKDCDIESL-PV---LPNELTEITIENCNNLTTLPGSI-----PEGLEKLTVCHCPEISGL-------- 110 (426)
T ss_pred HHHhcCCCEEEeCCCCCccc-CC---CCCCCcEEEccCCCCcccCCchh-----hhhhhheEccCccccccc--------
Confidence 44567888888888877766 31 23468888887754211111111 135566666665 33322
Q ss_pred cCcccEEEccCCCCCCCChhhHHHhhCCCcEEEcc
Q psy11648 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472 (584)
Q Consensus 438 ~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~ 472 (584)
+++|+.|++..+....+ ..+|++|++|.+.
T Consensus 111 P~sLe~L~L~~n~~~~L-----~~LPssLk~L~I~ 140 (426)
T PRK15386 111 PESVRSLEIKGSATDSI-----KNVPNGLTSLSIN 140 (426)
T ss_pred ccccceEEeCCCCCccc-----ccCcchHhheecc
Confidence 24566666655433222 1233556666654
No 65
>KOG2123|consensus
Probab=97.19 E-value=2.3e-05 Score=70.22 Aligned_cols=100 Identities=20% Similarity=0.213 Sum_probs=73.1
Q ss_pred cCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCCcccccCccccCCCcccCeeeccCccccccc-ccccCCCCCccE
Q psy11648 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV-KRTFIGMPNLQI 516 (584)
Q Consensus 438 ~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~-~~~~~~~~~L~~ 516 (584)
+.+.++|++.+|.+++| .+...+ +.|+.|.|+-|+|+.+.+ +..|.+|++|.|..|.|..+. ...+.++|+|+.
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kM-p~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKM-PLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhc-ccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 45677888888888876 456677 888888888888887754 668888889998888877642 245678888888
Q ss_pred EECCCCCCCCcCcc-----cccCCCCccEEE
Q psy11648 517 IDLSFNEISMLTGE-----QFYFSFKLRILN 542 (584)
Q Consensus 517 L~ls~n~i~~~~~~-----~~~~~~~L~~L~ 542 (584)
|.|..|.-.+..+. .+..+|+|++|+
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 88888875543332 234567777775
No 66
>KOG1947|consensus
Probab=96.85 E-value=0.00028 Score=73.54 Aligned_cols=85 Identities=21% Similarity=0.087 Sum_probs=37.7
Q ss_pred cCCccEEEcCCCcc-ccc-ccccccCCCCCcEEEccCC-cC-CCc---ChhhhccCcCCCEEeccCCC-CCccCCccCC-
Q psy11648 314 HKRLKEIRLSNNYL-ELI-ESDTFYNLKELNTITLSYN-LL-KSI---KTTSFKNLNNMLNIVLSFNQ-IKYIYPNAFV- 384 (584)
Q Consensus 314 ~~~L~~L~l~~~~~-~~~-~~~~l~~~~~L~~L~l~~~-~~-~~~---~~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~- 384 (584)
++.|+.+.+.++.. ... .......++.|+.++++++ .. ... .......+.+|+.++++.+. +++..-..+.
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~ 266 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALAS 266 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHh
Confidence 45566666555532 211 1223445566666666652 11 110 01122334555555555555 4433222222
Q ss_pred CCCCCcEEecCCCC
Q psy11648 385 NLPNLVKLDLQDNK 398 (584)
Q Consensus 385 ~~~~L~~L~l~~~~ 398 (584)
.|++|+.|.+.+|.
T Consensus 267 ~c~~L~~L~l~~c~ 280 (482)
T KOG1947|consen 267 RCPNLETLSLSNCS 280 (482)
T ss_pred hCCCcceEccCCCC
Confidence 25555555555554
No 67
>KOG2123|consensus
Probab=96.84 E-value=8.5e-05 Score=66.75 Aligned_cols=102 Identities=19% Similarity=0.177 Sum_probs=78.8
Q ss_pred hhhccccccccccccccccc----ccceeeeecCCceeecCCccccccccceeeEEEecCccccccccc-ccccccccce
Q psy11648 24 KLQHLGTTILKGDQLQGIFN----SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSG-LFDKIENIEQ 98 (584)
Q Consensus 24 ~l~~Lr~L~l~~~~l~~l~~----~~L~~L~ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i~~l~~~-~~~~~~~L~~ 98 (584)
.+...+.|++.|+.|++|.. +-|++|.||-|+|+...+ +..+ .+|+ +|.|..|.|..+.+- -.++...|+
T Consensus 17 dl~~vkKLNcwg~~L~DIsic~kMp~lEVLsLSvNkIssL~p--l~rC-trLk-ElYLRkN~I~sldEL~YLknlpsLr- 91 (388)
T KOG2123|consen 17 DLENVKKLNCWGCGLDDISICEKMPLLEVLSLSVNKISSLAP--LQRC-TRLK-ELYLRKNCIESLDELEYLKNLPSLR- 91 (388)
T ss_pred HHHHhhhhcccCCCccHHHHHHhcccceeEEeeccccccchh--HHHH-HHHH-HHHHHhcccccHHHHHHHhcCchhh-
Confidence 45667888999999999887 999999999999999865 7776 8999 999999999866543 255666799
Q ss_pred eeeecCCCceeeechhhhccchhcccccCceeccchhhcCCccceee
Q psy11648 99 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLL 145 (584)
Q Consensus 99 ~~L~ls~~~l~~~~~~~~~~~~~l~~~n~l~~l~~~l~~~~~L~~L~ 145 (584)
+|.|..|.-.+......... .+.-+++|+.||
T Consensus 92 -~LWL~ENPCc~~ag~nYR~~--------------VLR~LPnLkKLD 123 (388)
T KOG2123|consen 92 -TLWLDENPCCGEAGQNYRRK--------------VLRVLPNLKKLD 123 (388)
T ss_pred -hHhhccCCcccccchhHHHH--------------HHHHcccchhcc
Confidence 99999998776655433221 345566777766
No 68
>KOG2739|consensus
Probab=96.59 E-value=0.0013 Score=59.01 Aligned_cols=103 Identities=24% Similarity=0.220 Sum_probs=71.3
Q ss_pred CCCcEEEccCCcccccCccccCCCcccCeeeccCc--ccccccccccCCCCCccEEECCCCCCCCcCc-ccccCCCCccE
Q psy11648 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN--NIAVVVKRTFIGMPNLQIIDLSFNEISMLTG-EQFYFSFKLRI 540 (584)
Q Consensus 464 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n--~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~-~~~~~~~~L~~ 540 (584)
..|+.|.+.++.++.. ..|..+++|+.|.++.| .+.+........+|+|+++++++|++..+.. ..+..+++|..
T Consensus 43 ~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~ 120 (260)
T KOG2739|consen 43 VELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKS 120 (260)
T ss_pred cchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhh
Confidence 6677777777776644 35778899999999999 5555555556778999999999999874211 12445677889
Q ss_pred EEcCCCcCCccCc---cccC-CCCcceEECCC
Q psy11648 541 LNISHNRLRSLPR---DVFS-NTIIEKLDISY 568 (584)
Q Consensus 541 L~L~~n~l~~lp~---~l~~-~~~L~~l~l~~ 568 (584)
|++.+|..+.+.. .++. +++|+.++-.+
T Consensus 121 Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~d 152 (260)
T KOG2739|consen 121 LDLFNCSVTNLDDYREKVFLLLPSLKYLDGCD 152 (260)
T ss_pred hhcccCCccccccHHHHHHHHhhhhccccccc
Confidence 9999997665322 1222 37777776543
No 69
>KOG4308|consensus
Probab=96.59 E-value=2.5e-05 Score=79.05 Aligned_cols=17 Identities=47% Similarity=0.425 Sum_probs=10.0
Q ss_pred cCCccceeecccccccc
Q psy11648 137 LLSNLETLLLRCNKITD 153 (584)
Q Consensus 137 ~~~~L~~L~l~~n~i~~ 153 (584)
...++++|.+++|.++.
T Consensus 202 ~~~~le~L~L~~~~~t~ 218 (478)
T KOG4308|consen 202 PLSSLETLKLSRCGVTS 218 (478)
T ss_pred ccccHHHHhhhhcCcCh
Confidence 34566666666665553
No 70
>KOG2739|consensus
Probab=96.54 E-value=0.00097 Score=59.88 Aligned_cols=115 Identities=19% Similarity=0.181 Sum_probs=75.5
Q ss_pred cCcccEEEccCCCCCCCChhhHHHhhCCCcEEEccCC--cccccCccccCCCcccCeeeccCcccccc-cccccCCCCCc
Q psy11648 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN--EIKHLDATAFGNLDVLELLSLEHNNIAVV-VKRTFIGMPNL 514 (584)
Q Consensus 438 ~~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~l~~n--~l~~~~~~~l~~l~~L~~L~l~~n~~~~~-~~~~~~~~~~L 514 (584)
...++.+.+.+..++.+. .+..+ ++|++|.++.| .+.+-.......+++|+++++++|.+..+ ....+..+.+|
T Consensus 42 ~~~le~ls~~n~gltt~~--~~P~L-p~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL 118 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTLT--NFPKL-PKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENL 118 (260)
T ss_pred ccchhhhhhhccceeecc--cCCCc-chhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcch
Confidence 356677777777665432 23355 89999999999 44433333445679999999999988752 11235667888
Q ss_pred cEEECCCCCCCCcCc---ccccCCCCccEEEcCCCcCCccCccc
Q psy11648 515 QIIDLSFNEISMLTG---EQFYFSFKLRILNISHNRLRSLPRDV 555 (584)
Q Consensus 515 ~~L~ls~n~i~~~~~---~~~~~~~~L~~L~L~~n~l~~lp~~l 555 (584)
..|++..|..+.... ..|.-+++|++|+=.+..=...|.+.
T Consensus 119 ~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv~~~Ea~~~~ 162 (260)
T KOG2739|consen 119 KSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCDVDGEEAPEAD 162 (260)
T ss_pred hhhhcccCCccccccHHHHHHHHhhhhccccccccCCccccccc
Confidence 899999887664322 34555788888876665433444433
No 71
>KOG1947|consensus
Probab=96.34 E-value=0.00059 Score=71.11 Aligned_cols=220 Identities=21% Similarity=0.128 Sum_probs=116.3
Q ss_pred CCCCCcEEEccCCc-CCCc-ChhhhccCcCCCEEeccCC-CCCccC----CccCCCCCCCcEEecCCCC-CCCCChhhhc
Q psy11648 337 NLKELNTITLSYNL-LKSI-KTTSFKNLNNMLNIVLSFN-QIKYIY----PNAFVNLPNLVKLDLQDNK-LKDFNLNVFS 408 (584)
Q Consensus 337 ~~~~L~~L~l~~~~-~~~~-~~~~~~~~~~L~~L~l~~~-~~~~~~----~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~ 408 (584)
.++.++.+.+.++. +... .......++.|+.++++++ ...... ......+++|+.++++.+. +++.....+.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 46788888887773 3332 2334456788888888763 211111 1233456788888888877 6655554444
Q ss_pred ccccCCCCceEECCCCc-cccccccccccccCcccEEEccCCCCC-C--CChhhHHHhhCCCcEEEccCCcccccCcccc
Q psy11648 409 NITSKQTPMNLNLSNNY-ITNLYENDKKQAPIYIKSLDLSNNRIQ-E--VPVNFLQTFADSLRKLYLDFNEIKHLDATAF 484 (584)
Q Consensus 409 ~~~~~~~l~~L~l~~~~-l~~~~~~~~~~~~~~L~~L~l~~~~l~-~--~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l 484 (584)
. .++.++.+.+..|. +++.........++.|++|+++.|... + +. ..... +++++.|.+....
T Consensus 266 ~--~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~-~~~~~-c~~l~~l~~~~~~--------- 332 (482)
T KOG1947|consen 266 S--RCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLE-ALLKN-CPNLRELKLLSLN--------- 332 (482)
T ss_pred h--hCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHH-HHHHh-CcchhhhhhhhcC---------
Confidence 3 24566666666555 455554444555666777777665432 1 11 11222 2555554433221
Q ss_pred CCCcccCeeeccCcccc---cccccccCCCCCccEEECCCCCCCCcC-cccccCCCCc--------------cEEEcCCC
Q psy11648 485 GNLDVLELLSLEHNNIA---VVVKRTFIGMPNLQIIDLSFNEISMLT-GEQFYFSFKL--------------RILNISHN 546 (584)
Q Consensus 485 ~~l~~L~~L~l~~n~~~---~~~~~~~~~~~~L~~L~ls~n~i~~~~-~~~~~~~~~L--------------~~L~L~~n 546 (584)
.++.++.+.+.++... .........|+.++.+.+.++...... ...+.+|+.| +.|+++.|
T Consensus 333 -~c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~~~l~~~~~~~~~l~~L~l~~~ 411 (482)
T KOG1947|consen 333 -GCPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLTESLELRLCRSDSLRVLNLSDC 411 (482)
T ss_pred -CCccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccchHHHHHhccCCccceEecccC
Confidence 1444555554443221 122234567888888888877644333 2344555555 55666665
Q ss_pred cCCccCccccC----CCCcceEECCCCCC
Q psy11648 547 RLRSLPRDVFS----NTIIEKLDISYNQD 571 (584)
Q Consensus 547 ~l~~lp~~l~~----~~~L~~l~l~~n~l 571 (584)
...... .+.. +..++.+++.+++.
T Consensus 412 ~~~t~~-~l~~~~~~~~~~~~l~~~~~~~ 439 (482)
T KOG1947|consen 412 RLVTDK-GLRCLADSCSNLKDLDLSGCRV 439 (482)
T ss_pred cccccc-chHHHhhhhhccccCCccCccc
Confidence 444332 2222 34455566655543
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.94 E-value=0.0029 Score=33.50 Aligned_cols=17 Identities=35% Similarity=0.358 Sum_probs=8.3
Q ss_pred cceEECCCCCCCCCCCC
Q psy11648 561 IEKLDISYNQDKIRPGR 577 (584)
Q Consensus 561 L~~l~l~~n~l~~~p~~ 577 (584)
|++|++++|+++.+|+.
T Consensus 2 L~~Ldls~n~l~~ip~~ 18 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSS 18 (22)
T ss_dssp ESEEEETSSEESEEGTT
T ss_pred ccEEECCCCcCEeCChh
Confidence 44455555544444444
No 73
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.92 E-value=0.005 Score=30.15 Aligned_cols=15 Identities=60% Similarity=0.884 Sum_probs=5.5
Q ss_pred CccEEEcCCCcCCcc
Q psy11648 537 KLRILNISHNRLRSL 551 (584)
Q Consensus 537 ~L~~L~L~~n~l~~l 551 (584)
+|+.|++++|+|+++
T Consensus 2 ~L~~L~l~~n~L~~l 16 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSL 16 (17)
T ss_dssp T-SEEEETSS--SSE
T ss_pred ccCEEECCCCCCCCC
Confidence 344444444444444
No 74
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.77 E-value=0.0053 Score=30.07 Aligned_cols=17 Identities=29% Similarity=0.352 Sum_probs=11.9
Q ss_pred CCcceEECCCCCCCCCC
Q psy11648 559 TIIEKLDISYNQDKIRP 575 (584)
Q Consensus 559 ~~L~~l~l~~n~l~~~p 575 (584)
++|++|++++|+++++|
T Consensus 1 ~~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 1 PNLRTLDLSNNRLTSLP 17 (17)
T ss_dssp TT-SEEEETSS--SSE-
T ss_pred CccCEEECCCCCCCCCc
Confidence 57999999999999887
No 75
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.61 E-value=0.0062 Score=32.25 Aligned_cols=18 Identities=39% Similarity=0.650 Sum_probs=11.7
Q ss_pred CccEEEcCCCcCCccCcc
Q psy11648 537 KLRILNISHNRLRSLPRD 554 (584)
Q Consensus 537 ~L~~L~L~~n~l~~lp~~ 554 (584)
+|++|++++|+++.+|..
T Consensus 1 ~L~~Ldls~n~l~~ip~~ 18 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSS 18 (22)
T ss_dssp TESEEEETSSEESEEGTT
T ss_pred CccEEECCCCcCEeCChh
Confidence 356667777766666655
No 76
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.36 E-value=0.012 Score=32.74 Aligned_cols=22 Identities=27% Similarity=0.237 Sum_probs=14.4
Q ss_pred CCcceEECCCCCCCCCCCCCCC
Q psy11648 559 TIIEKLDISYNQDKIRPGRESN 580 (584)
Q Consensus 559 ~~L~~l~l~~n~l~~~p~~~~~ 580 (584)
++|+.|++++|+++.+|...|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4566666666666666666664
No 77
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.36 E-value=0.012 Score=32.74 Aligned_cols=22 Identities=27% Similarity=0.237 Sum_probs=14.4
Q ss_pred CCcceEECCCCCCCCCCCCCCC
Q psy11648 559 TIIEKLDISYNQDKIRPGRESN 580 (584)
Q Consensus 559 ~~L~~l~l~~n~l~~~p~~~~~ 580 (584)
++|+.|++++|+++.+|...|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4566666666666666666664
No 78
>KOG4308|consensus
Probab=95.18 E-value=0.00017 Score=73.17 Aligned_cols=89 Identities=19% Similarity=0.136 Sum_probs=42.2
Q ss_pred ceeeeecCCceeecCCcccccc---ccceeeEEEecCcccc-----cccccccccccccceeeeecCCCceeeechhhhc
Q psy11648 46 LRELEITGKDLKFIDPSAFDNI---DACYDLTLKITNTQIE-----ELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY 117 (584)
Q Consensus 46 L~~L~ls~n~~~~~~~~~~~~~---~~~L~~~L~ls~n~i~-----~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~ 117 (584)
+.++++..|.+.+.....+... .++|+ .|++++|.+. .+-+.+-.....++ +|++..|.++......+.
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~-~L~l~~n~l~~~g~~~l~~~l~~~~~~l~--~L~l~~c~l~~~g~~~l~ 165 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLG-QLDLSGNNLGDEGARLLCEGLRLPQCLLQ--TLELVSCSLTSEGAAPLA 165 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHh-HhhcccCCCccHhHHHHHhhcccchHHHH--HHHhhcccccccchHHHH
Confidence 5555555555555433322221 24555 5666666555 11222222212255 555555555544443322
Q ss_pred cchhcccccCceeccchhhcCCccceeeccccccc
Q psy11648 118 SNVTKLQHLGTTILKDREKLLSNLETLLLRCNKIT 152 (584)
Q Consensus 118 ~~~~l~~~n~l~~l~~~l~~~~~L~~L~l~~n~i~ 152 (584)
. .+....+++.++++.|.+.
T Consensus 166 ~---------------~L~~~~~l~~l~l~~n~l~ 185 (478)
T KOG4308|consen 166 A---------------VLEKNEHLTELDLSLNGLI 185 (478)
T ss_pred H---------------HHhcccchhHHHHHhcccc
Confidence 2 2434566666666666554
No 79
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.66 E-value=0.025 Score=31.37 Aligned_cols=22 Identities=45% Similarity=0.679 Sum_probs=15.6
Q ss_pred CCccEEEcCCCcCCccCccccC
Q psy11648 536 FKLRILNISHNRLRSLPRDVFS 557 (584)
Q Consensus 536 ~~L~~L~L~~n~l~~lp~~l~~ 557 (584)
++|++|+|++|+|+.+|.+.+.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 5677777777777777766553
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.66 E-value=0.025 Score=31.37 Aligned_cols=22 Identities=45% Similarity=0.679 Sum_probs=15.6
Q ss_pred CCccEEEcCCCcCCccCccccC
Q psy11648 536 FKLRILNISHNRLRSLPRDVFS 557 (584)
Q Consensus 536 ~~L~~L~L~~n~l~~lp~~l~~ 557 (584)
++|++|+|++|+|+.+|.+.+.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 5677777777777777766553
No 81
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=91.04 E-value=0.15 Score=27.89 Aligned_cols=18 Identities=28% Similarity=0.353 Sum_probs=13.1
Q ss_pred CCcceEECCCCCCCCCCC
Q psy11648 559 TIIEKLDISYNQDKIRPG 576 (584)
Q Consensus 559 ~~L~~l~l~~n~l~~~p~ 576 (584)
++|+.|++++|+++++|+
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 367777777777777776
No 82
>KOG3864|consensus
Probab=90.77 E-value=0.03 Score=48.49 Aligned_cols=12 Identities=25% Similarity=0.556 Sum_probs=4.8
Q ss_pred cCCCCCccEEEC
Q psy11648 508 FIGMPNLQIIDL 519 (584)
Q Consensus 508 ~~~~~~L~~L~l 519 (584)
+..+++|+.|.+
T Consensus 172 L~~lknLr~L~l 183 (221)
T KOG3864|consen 172 LLKLKNLRRLHL 183 (221)
T ss_pred HHHhhhhHHHHh
Confidence 333444444433
No 83
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=88.83 E-value=0.28 Score=26.90 Aligned_cols=18 Identities=50% Similarity=0.702 Sum_probs=15.5
Q ss_pred CCccEEEcCCCcCCccCc
Q psy11648 536 FKLRILNISHNRLRSLPR 553 (584)
Q Consensus 536 ~~L~~L~L~~n~l~~lp~ 553 (584)
++|++|++++|+|+.+|+
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 578899999999999885
No 84
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=84.90 E-value=0.34 Score=26.10 Aligned_cols=20 Identities=45% Similarity=0.635 Sum_probs=11.1
Q ss_pred ccceeeeecCCCceeeechhhh
Q psy11648 95 NIEQMTLDLSHNKLSVLNMATL 116 (584)
Q Consensus 95 ~L~~~~L~ls~~~l~~~~~~~~ 116 (584)
+|+ +|+|++|.|++.....+
T Consensus 3 ~L~--~L~l~~n~i~~~g~~~l 22 (24)
T PF13516_consen 3 NLE--TLDLSNNQITDEGASAL 22 (24)
T ss_dssp T-S--EEE-TSSBEHHHHHHHH
T ss_pred CCC--EEEccCCcCCHHHHHHh
Confidence 366 77777777766554443
No 85
>KOG0473|consensus
Probab=82.94 E-value=0.15 Score=45.31 Aligned_cols=80 Identities=11% Similarity=0.079 Sum_probs=46.2
Q ss_pred cceeeEEEecCcccccccccccccccccceeeeecCCCceeeechhhhccchhccc----ccCceeccchhhcCCcccee
Q psy11648 69 ACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQ----HLGTTILKDREKLLSNLETL 144 (584)
Q Consensus 69 ~~L~~~L~ls~n~i~~l~~~~~~~~~~L~~~~L~ls~~~l~~~~~~~~~~~~~l~~----~n~l~~l~~~l~~~~~L~~L 144 (584)
...+ .||++.|++..+...+..... +. .+|++.|.+... +..+.+...+.. .|+.+..|.+++..++++++
T Consensus 42 kr~t-vld~~s~r~vn~~~n~s~~t~-~~--rl~~sknq~~~~-~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~ 116 (326)
T KOG0473|consen 42 KRVT-VLDLSSNRLVNLGKNFSILTR-LV--RLDLSKNQIKFL-PKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKN 116 (326)
T ss_pred ceee-eehhhhhHHHhhccchHHHHH-HH--HHhccHhhHhhC-hhhHHHHHHHHHHHhhccchhhCCccccccCCcchh
Confidence 4455 566666655555544444444 55 556665554322 223333333222 45556778888888999999
Q ss_pred ecccccccc
Q psy11648 145 LLRCNKITD 153 (584)
Q Consensus 145 ~l~~n~i~~ 153 (584)
++.++.+..
T Consensus 117 e~k~~~~~~ 125 (326)
T KOG0473|consen 117 EQKKTEFFR 125 (326)
T ss_pred hhccCcchH
Confidence 998886433
No 86
>KOG3864|consensus
Probab=82.74 E-value=0.27 Score=42.83 Aligned_cols=35 Identities=20% Similarity=0.146 Sum_probs=17.8
Q ss_pred CCCCCEEEccCcc-ccccccccccCCCCCcEEEccc
Q psy11648 264 LNTLEWLAMDNNN-IKNIRNYSLYNLTSLNYINLEY 298 (584)
Q Consensus 264 ~~~L~~L~l~~~~-l~~~~~~~l~~l~~L~~L~l~~ 298 (584)
.++|+.|++++|. |++-....+..+++|+.|.+.+
T Consensus 150 ~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 150 APSLQDLDLSGCPRITDGGLACLLKLKNLRRLHLYD 185 (221)
T ss_pred ccchheeeccCCCeechhHHHHHHHhhhhHHHHhcC
Confidence 3455666666552 4433333455555555555543
No 87
>KOG0473|consensus
Probab=82.06 E-value=0.035 Score=49.08 Aligned_cols=85 Identities=16% Similarity=0.125 Sum_probs=46.1
Q ss_pred CCcccCeeeccCcccccccccccCCCCCccEEECCCCCCCCcCcccccCCCCccEEEcCCCcCCccCccccCCCCcceEE
Q psy11648 486 NLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLD 565 (584)
Q Consensus 486 ~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~~~~~~~~~~~~~L~~L~L~~n~l~~lp~~l~~~~~L~~l~ 565 (584)
.....+.||++.|.+.... .-|+-++.|..|+++.|.+.-.+ +.+.....++++++++|..+..|......++++.++
T Consensus 40 ~~kr~tvld~~s~r~vn~~-~n~s~~t~~~rl~~sknq~~~~~-~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~e 117 (326)
T KOG0473|consen 40 SFKRVTVLDLSSNRLVNLG-KNFSILTRLVRLDLSKNQIKFLP-KDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKNE 117 (326)
T ss_pred ccceeeeehhhhhHHHhhc-cchHHHHHHHHHhccHhhHhhCh-hhHHHHHHHHHHHhhccchhhCCccccccCCcchhh
Confidence 3344555555555443322 23444455556666666554433 334444555666666666666666666666666666
Q ss_pred CCCCCCC
Q psy11648 566 ISYNQDK 572 (584)
Q Consensus 566 l~~n~l~ 572 (584)
.-+|+++
T Consensus 118 ~k~~~~~ 124 (326)
T KOG0473|consen 118 QKKTEFF 124 (326)
T ss_pred hccCcch
Confidence 6666543
No 88
>KOG4242|consensus
Probab=79.24 E-value=3.2 Score=41.22 Aligned_cols=98 Identities=18% Similarity=0.058 Sum_probs=51.0
Q ss_pred CccccCCCccceeccccccccchhhhcccccccccccccc-----ccc----ccceeeeecCCceeecCCcccccc--cc
Q psy11648 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQG-----IFN----SKLRELEITGKDLKFIDPSAFDNI--DA 69 (584)
Q Consensus 1 ~~l~ls~~~~~~~~~~~~~~~l~~l~~Lr~L~l~~~~l~~-----l~~----~~L~~L~ls~n~~~~~~~~~~~~~--~~ 69 (584)
+++|++.|.|.+--+-++.+-... ++++.+.+++ ++. ..+.+++++.|..++..+.....+ ..
T Consensus 168 r~~dls~npi~dkvpihl~~p~~p------l~lr~c~lsskfis~l~~qsg~~~lteldls~n~~Kddip~~~n~~a~~~ 241 (553)
T KOG4242|consen 168 RQHDLSPNPIGDKVPIHLPQPGNP------LSLRVCELSSKFISKLLIQSGRLWLTELDLSTNGGKDDIPRTLNKKAGTL 241 (553)
T ss_pred hhhccCCCcccccCCccccCCCCc------cchhhhhhhhhHHHHhhhhhccccccccccccCCCCccchhHHHHhhhhh
Confidence 356677777776555443322211 2444444432 222 667777777777666544333221 22
Q ss_pred ceeeEEEecCcccc---cccccccccccccceeeeecCCCc
Q psy11648 70 CYDLTLKITNTQIE---ELPSGLFDKIENIEQMTLDLSHNK 107 (584)
Q Consensus 70 ~L~~~L~ls~n~i~---~l~~~~~~~~~~L~~~~L~ls~~~ 107 (584)
-++ .++.+...+. ......+.....++ +.+++.|.
T Consensus 242 vl~-~ld~s~tgirlD~l~~~l~~g~~tkl~--~~kls~ng 279 (553)
T KOG4242|consen 242 VLF-KLDRSTTGIRLDLLTSPLAAGRTTKLT--FGKLSRNG 279 (553)
T ss_pred hhh-cccccccccchhhcccccccccccccc--hhhhccCC
Confidence 355 6666666544 23344455555566 66666663
No 89
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=78.83 E-value=1.8 Score=23.89 Aligned_cols=16 Identities=25% Similarity=0.576 Sum_probs=9.1
Q ss_pred CCccEEEcCCCcCCcc
Q psy11648 536 FKLRILNISHNRLRSL 551 (584)
Q Consensus 536 ~~L~~L~L~~n~l~~l 551 (584)
++|+.|++++|+|+.+
T Consensus 2 ~~L~~L~L~~NkI~~I 17 (26)
T smart00365 2 TNLEELDLSQNKIKKI 17 (26)
T ss_pred CccCEEECCCCcccee
Confidence 3556666666665544
No 90
>KOG3763|consensus
Probab=70.37 E-value=2.2 Score=43.20 Aligned_cols=64 Identities=27% Similarity=0.214 Sum_probs=35.0
Q ss_pred CCcccCeeeccCccccccc--ccccCCCCCccEEECCCC--CCCCcCcccccCCCCccEEEcCCCcCC
Q psy11648 486 NLDVLELLSLEHNNIAVVV--KRTFIGMPNLQIIDLSFN--EISMLTGEQFYFSFKLRILNISHNRLR 549 (584)
Q Consensus 486 ~l~~L~~L~l~~n~~~~~~--~~~~~~~~~L~~L~ls~n--~i~~~~~~~~~~~~~L~~L~L~~n~l~ 549 (584)
+.+.+..+.+++|.+..+. ...-...|.|+.|+|++| .+.....-.--....|++|.+.||.+.
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccc
Confidence 4566777777777655431 112234577777777777 333211111112346777777777666
No 91
>KOG4242|consensus
Probab=68.34 E-value=43 Score=33.75 Aligned_cols=34 Identities=18% Similarity=0.026 Sum_probs=16.4
Q ss_pred CCcEEecCCCCCCCCChhhhcccccCCCCceEECC
Q psy11648 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422 (584)
Q Consensus 388 ~L~~L~l~~~~l~~~~~~~~~~~~~~~~l~~L~l~ 422 (584)
.++++.+.+|...+...... ........+.+.+.
T Consensus 355 R~q~l~~rdnnldgeg~~vg-k~~~s~s~r~l~ag 388 (553)
T KOG4242|consen 355 RVQVLLQRDNNLDGEGGAVG-KRKQSKSGRILKAG 388 (553)
T ss_pred eeeEeecccccccccccccc-ceeecccccccccc
Confidence 36666666666555443332 23233344444443
No 92
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=67.58 E-value=4 Score=22.34 Aligned_cols=15 Identities=27% Similarity=0.313 Sum_probs=9.3
Q ss_pred CCCccEEEcCCC-cCC
Q psy11648 535 SFKLRILNISHN-RLR 549 (584)
Q Consensus 535 ~~~L~~L~L~~n-~l~ 549 (584)
|++|++|++++| .++
T Consensus 1 c~~L~~L~l~~C~~it 16 (26)
T smart00367 1 CPNLRELDLSGCTNIT 16 (26)
T ss_pred CCCCCEeCCCCCCCcC
Confidence 456677777776 454
No 93
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=65.51 E-value=2.9 Score=23.53 Aligned_cols=20 Identities=40% Similarity=0.441 Sum_probs=13.9
Q ss_pred cceeeeecCCCceeeechhhhc
Q psy11648 96 IEQMTLDLSHNKLSVLNMATLY 117 (584)
Q Consensus 96 L~~~~L~ls~~~l~~~~~~~~~ 117 (584)
|+ +|||++|.+.......++
T Consensus 4 L~--~LdL~~N~i~~~G~~~L~ 23 (28)
T smart00368 4 LR--ELDLSNNKLGDEGARALA 23 (28)
T ss_pred cC--EEECCCCCCCHHHHHHHH
Confidence 77 888888887765555444
No 94
>KOG3763|consensus
Probab=56.26 E-value=3.9 Score=41.59 Aligned_cols=67 Identities=22% Similarity=0.194 Sum_probs=38.2
Q ss_pred cCCCCCCEEEcCCCccceeecCCccccccccceEEeeccc--ccCCCCchhhHhhhcCCCCCEEEccCcccc
Q psy11648 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS--LFNSNEFPYYILNKNLNTLEWLAMDNNNIK 278 (584)
Q Consensus 209 ~~~~~L~~L~l~~~~l~~~~~~~~~~~~l~~L~~L~l~~~--~~~~~~l~~~~~~~~~~~L~~L~l~~~~l~ 278 (584)
.+.+.+..+++++|++..++.....-...|+|..|+|++| .+. ..++..- -+...|++|-+.+|.+.
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~--~~~el~K-~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKIS--SESELDK-LKGLPLEELVLEGNPLC 283 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhc--chhhhhh-hcCCCHHHeeecCCccc
Confidence 3566777777887777655333333444577777777777 322 1111110 13345777777777665
No 95
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=22.33 E-value=57 Score=40.80 Aligned_cols=32 Identities=28% Similarity=0.347 Sum_probs=24.4
Q ss_pred eccCcccccccccccCCCCCccEEECCCCCCC
Q psy11648 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525 (584)
Q Consensus 494 ~l~~n~~~~~~~~~~~~~~~L~~L~ls~n~i~ 525 (584)
||++|+|..+.+..|..+++|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 56778887777777778888888888887654
No 96
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=20.56 E-value=45 Score=41.57 Aligned_cols=30 Identities=10% Similarity=0.308 Sum_probs=14.9
Q ss_pred ecCCceeecCCccccccccceeeEEEecCccc
Q psy11648 51 ITGKDLKFIDPSAFDNIDACYDLTLKITNTQI 82 (584)
Q Consensus 51 ls~n~~~~~~~~~~~~~~~~L~~~L~ls~n~i 82 (584)
|++|+|..+....|..+ ++|+ +|+|++|.+
T Consensus 2 LSnN~LstLp~g~F~~L-~sL~-~LdLsgNPw 31 (2740)
T TIGR00864 2 ISNNKISTIEEGICANL-CNLS-EIDLSGNPF 31 (2740)
T ss_pred CCCCcCCccChHHhccC-CCce-EEEeeCCcc
Confidence 44555555555455444 4455 555555543
Done!