Your job contains 1 sequence.
>psy11648
MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID
PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNV
TKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQV
SDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKL
QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK
ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK
NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN
LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD
ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI
LNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGRESNPRPI
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11648
(584 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028888 - symbol:CG4168 species:7227 "Drosophila m... 655 6.9e-65 2
FB|FBgn0000313 - symbol:chp "chaoptic" species:7227 "Dros... 426 2.7e-41 2
FB|FBgn0261269 - symbol:conv "convoluted" species:7227 "D... 379 4.4e-32 1
WB|WBGene00002282 - symbol:let-4 species:6239 "Caenorhabd... 334 3.2e-27 1
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 324 2.1e-26 1
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 319 6.6e-26 1
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 319 7.7e-26 1
FB|FBgn0259677 - symbol:CG42346 species:7227 "Drosophila ... 322 2.6e-25 1
MGI|MGI:107973 - symbol:Igfals "insulin-like growth facto... 311 6.3e-25 1
UNIPROTKB|Q8TF66 - symbol:LRRC15 "Leucine-rich repeat-con... 310 7.1e-25 1
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 310 8.2e-25 1
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 306 2.4e-24 1
UNIPROTKB|E2RIV9 - symbol:TLR3 "Uncharacterized protein" ... 308 3.6e-24 1
UNIPROTKB|Q3BBY1 - symbol:Q3BBY1 "Toll-like receptor 3" s... 239 6.8e-24 2
RGD|1562655 - symbol:Tlr13 "toll-like receptor 13" specie... 305 9.1e-24 1
MGI|MGI:3045213 - symbol:Tlr13 "toll-like receptor 13" sp... 304 1.2e-23 1
ZFIN|ZDB-GENE-040219-15 - symbol:tlr5b "toll-like recepto... 264 1.8e-23 2
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 296 2.7e-23 1
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 295 4.1e-23 1
UNIPROTKB|O15455 - symbol:TLR3 "Toll-like receptor 3" spe... 231 8.4e-23 2
FB|FBgn0085397 - symbol:Fili "Fish-lips" species:7227 "Dr... 286 6.7e-22 1
MGI|MGI:1919006 - symbol:Cpn2 "carboxypeptidase N, polype... 265 6.9e-22 2
FB|FBgn0034083 - symbol:lbk "lambik" species:7227 "Drosop... 291 7.0e-22 2
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 283 9.2e-22 1
WB|WBGene00006366 - symbol:sym-1 species:6239 "Caenorhabd... 284 9.4e-22 1
UNIPROTKB|Q7L0X0 - symbol:TRIL "TLR4 interactor with leuc... 284 1.4e-21 1
UNIPROTKB|F1NEL3 - symbol:LGR4 "Uncharacterized protein" ... 285 1.6e-21 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 285 1.7e-21 1
FB|FBgn0036494 - symbol:Toll-6 "Toll-6" species:7227 "Dro... 278 2.0e-21 2
UNIPROTKB|Q5TJ59 - symbol:TLR3 "Toll-like receptor 3" spe... 281 3.5e-21 1
UNIPROTKB|A5H649 - symbol:TLR3 "Toll-like receptor 3" spe... 281 3.5e-21 1
FB|FBgn0034476 - symbol:Toll-7 "Toll-7" species:7227 "Dro... 282 5.6e-21 1
FB|FBgn0052055 - symbol:CG32055 species:7227 "Drosophila ... 277 6.1e-21 2
ZFIN|ZDB-GENE-040220-5 - symbol:tlr22 "toll-like receptor... 279 6.3e-21 1
ZFIN|ZDB-GENE-030131-4683 - symbol:tsku "tsukushi small l... 262 7.9e-21 1
FB|FBgn0262473 - symbol:Tl "Toll" species:7227 "Drosophil... 279 8.0e-21 1
UNIPROTKB|F1NKM7 - symbol:LGR6 "Uncharacterized protein" ... 275 1.3e-20 1
UNIPROTKB|A0ENH4 - symbol:TLR3 "Toll-like receptor 3" spe... 231 1.7e-20 2
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 165 2.1e-20 4
ZFIN|ZDB-GENE-031113-8 - symbol:lrrc15 "leucine rich repe... 270 2.1e-20 1
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 165 2.6e-20 4
MGI|MGI:1914123 - symbol:Tril "TLR4 interactor with leuci... 272 2.9e-20 1
UNIPROTKB|Q65Z91 - symbol:TSKU "Tsukushin" species:9031 "... 258 4.1e-20 1
UNIPROTKB|Q7Z2Q7 - symbol:LRRC70 "Leucine-rich repeat-con... 268 4.6e-20 1
ZFIN|ZDB-GENE-050506-80 - symbol:lrrtm1 "leucine rich rep... 266 4.8e-20 1
FB|FBgn0029114 - symbol:Tollo "Tollo" species:7227 "Droso... 273 4.9e-20 1
RGD|1310827 - symbol:Tril "TLR4 interactor with leucine-r... 268 7.9e-20 1
MGI|MGI:1315203 - symbol:Slit1 "slit homolog 1 (Drosophil... 165 9.4e-20 3
UNIPROTKB|F1P9F0 - symbol:LGR4 "Uncharacterized protein" ... 267 1.2e-19 1
UNIPROTKB|E2RGP5 - symbol:SLITRK3 "Uncharacterized protei... 166 1.3e-19 2
UNIPROTKB|E2RGS8 - symbol:LGR6 "Uncharacterized protein" ... 266 1.6e-19 2
UNIPROTKB|F1N513 - symbol:LOC527364 "Uncharacterized prot... 165 1.6e-19 2
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 267 1.7e-19 1
MGI|MGI:2441805 - symbol:Lgr6 "leucine-rich repeat-contai... 264 1.7e-19 2
UNIPROTKB|B3KTY4 - symbol:SLITRK2 "cDNA FLJ38959 fis, clo... 173 1.7e-19 2
FB|FBgn0033250 - symbol:CG14762 species:7227 "Drosophila ... 259 2.0e-19 1
UNIPROTKB|O94933 - symbol:SLITRK3 "SLIT and NTRK-like pro... 164 2.1e-19 2
RGD|1310506 - symbol:Slitrk3 "SLIT and NTRK-like family, ... 164 2.1e-19 2
MGI|MGI:2679447 - symbol:Slitrk3 "SLIT and NTRK-like fami... 164 2.1e-19 2
UNIPROTKB|F1NZH1 - symbol:SLITRK6 "Uncharacterized protei... 163 2.2e-19 2
UNIPROTKB|F1MT22 - symbol:LGR5 "Uncharacterized protein" ... 264 2.6e-19 1
UNIPROTKB|Q9H156 - symbol:SLITRK2 "SLIT and NTRK-like pro... 173 2.7e-19 2
UNIPROTKB|F1MLX5 - symbol:LGR4 "Uncharacterized protein" ... 264 3.3e-19 1
UNIPROTKB|F1RQ61 - symbol:SLITRK2 "Uncharacterized protei... 174 3.4e-19 2
UNIPROTKB|G5E9B3 - symbol:LGR4 "Leucine-rich repeat-conta... 263 3.5e-19 1
UNIPROTKB|Q9BXB1 - symbol:LGR4 "Leucine-rich repeat-conta... 263 3.7e-19 1
UNIPROTKB|F1SGM5 - symbol:LGR4 "Uncharacterized protein" ... 262 4.2e-19 1
TAIR|locus:2117617 - symbol:PIRL4 "plant intracellular ra... 258 4.3e-19 1
UNIPROTKB|G3N2N1 - symbol:SLITRK2 "Uncharacterized protei... 173 4.4e-19 2
MGI|MGI:2679449 - symbol:Slitrk2 "SLIT and NTRK-like fami... 173 5.5e-19 2
UNIPROTKB|F1SH46 - symbol:SLITRK3 "Uncharacterized protei... 160 5.8e-19 2
RGD|1561361 - symbol:Slitrk2 "SLIT and NTRK-like family, ... 173 7.1e-19 2
UNIPROTKB|F1NZH0 - symbol:SLITRK1 "Uncharacterized protei... 170 9.0e-19 2
UNIPROTKB|F1NEZ4 - symbol:SLITRK2 "Uncharacterized protei... 171 9.6e-19 2
UNIPROTKB|Q9H5Y7 - symbol:SLITRK6 "SLIT and NTRK-like pro... 164 9.6e-19 2
RGD|628615 - symbol:Lgr4 "leucine-rich repeat-containing ... 259 1.0e-18 1
UNIPROTKB|Q9Z2H4 - symbol:Lgr4 "Leucine-rich repeat-conta... 259 1.0e-18 1
MGI|MGI:1891468 - symbol:Lgr4 "leucine-rich repeat-contai... 259 1.0e-18 1
RGD|1560339 - symbol:Lgr6 "leucine-rich repeat-containing... 257 1.0e-18 2
UNIPROTKB|Q9HBX8 - symbol:LGR6 "Leucine-rich repeat-conta... 257 1.0e-18 2
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 164 1.3e-18 3
FB|FBgn0003255 - symbol:rk "rickets" species:7227 "Drosop... 260 1.3e-18 1
UNIPROTKB|Q8IW52 - symbol:SLITRK4 "SLIT and NTRK-like pro... 165 1.3e-18 2
UNIPROTKB|F1NG27 - symbol:TLR3 "Uncharacterized protein" ... 257 1.5e-18 1
UNIPROTKB|F1RZN4 - symbol:TLR3 "Uncharacterized protein" ... 257 1.5e-18 1
RGD|2724 - symbol:Gp5 "glycoprotein V (platelet)" species... 253 1.7e-18 1
ZFIN|ZDB-GENE-040219-12 - symbol:tlr8b "toll-like recepto... 206 1.8e-18 2
MGI|MGI:2443718 - symbol:Lrig2 "leucine-rich repeats and ... 257 2.0e-18 1
UNIPROTKB|E1C125 - symbol:SLITRK4 "Uncharacterized protei... 163 2.1e-18 2
MGI|MGI:2442509 - symbol:Slitrk4 "SLIT and NTRK-like fami... 168 2.1e-18 2
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 199 2.4e-18 3
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 199 2.4e-18 3
WB|WBGene00020649 - symbol:sma-10 species:6239 "Caenorhab... 255 2.5e-18 1
UNIPROTKB|E2RFX7 - symbol:SLITRK6 "Uncharacterized protei... 164 2.5e-18 2
RGD|1588563 - symbol:Slitrk4 "SLIT and NTRK-like family, ... 172 2.7e-18 2
RGD|69310 - symbol:Slit2 "slit homolog 2 (Drosophila)" sp... 171 2.8e-18 3
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 229 3.3e-18 2
UNIPROTKB|O94898 - symbol:LRIG2 "Leucine-rich repeats and... 254 4.2e-18 1
UNIPROTKB|F1S8Z0 - symbol:SLIT1 "Uncharacterized protein"... 163 5.0e-18 3
ZFIN|ZDB-GENE-040220-4 - symbol:tlr21 "toll-like receptor... 252 6.3e-18 1
WARNING: Descriptions of 1118 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 655 (235.6 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 176/505 (34%), Positives = 274/505 (54%)
Query: 86 PSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXX 145
PS E +E LDL N+L+ + +A ++ L HL L +
Sbjct: 517 PSAFEGLTETLEY--LDLERNRLTTVPVA-----LSSLHHLKYLYLTSNQISQLNNLPSF 569
Query: 146 XRCNKITDLNGNLF---------RHLQKSIVKAKKNNNNN-EDQVSDREKXXXXXXXXXX 195
++ L+GN F + Q S + N+ + + + +
Sbjct: 570 TENLRVLSLSGNNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILL 629
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFD-VFEKLQLLEISFSLFNSNE 254
R NKIT L+ F L +QE+SLSFN + I + VF+ V L++LE+SF++F +
Sbjct: 630 RNNKITHLHLGSFAGLEQIQEISLSFNDITIH--HPLVFENVSRTLKILELSFAVFPARS 687
Query: 255 F----PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH 310
P L L+ L WL +DNNN+K + N S + L+YINL +N++ + LF
Sbjct: 688 LESLDPLDALLP-LSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQ 746
Query: 311 FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
+ H L EI LS N LE +E+ TF++L +L T+ L N L++I +F NL + + L
Sbjct: 747 SDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDL 806
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
S+N++ I AF LPNL LDL N+L +L F +++ TP+ LN+S+N+I + Y
Sbjct: 807 SYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFY 866
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
D+ + +YI LD+S+N + + +F A++LR L L N++ L + AFG+L+ L
Sbjct: 867 --DELSSYMYIYQLDISHNHVTKSD-SFTN-LANTLRFLNLAHNQLGSLQSHAFGDLEFL 922
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
E+L++ HNN+ + +R+F G+ +LQ +DLS N++ L EQF KLRIL I+ NRLR+
Sbjct: 923 EILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRA 982
Query: 551 LPRDVFSNTIIEKLDISYNQDKIRP 575
LPR+VF NT +E LDI+ NQ + P
Sbjct: 983 LPREVFMNTRLEFLDIAENQLSVWP 1007
Score = 278 (102.9 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 100/378 (26%), Positives = 191/378 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFP 256
N + L F L +LQ L+L N+L+ I ++ F E L+ L++S++ L N +
Sbjct: 761 NGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHA--FHNLEFLRYLDLSYNRLVNISHGA 818
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYS-LY--NLTSLNYINLEYNKISKIHNNLFHFNI 313
+ +L NL L+ + +N + ++ S LY N T+ +N+ +N I+ ++ L +
Sbjct: 819 FTVL-PNLAALDLM---HNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDEL---SS 871
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKE-LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ + ++ +S+N++ +SD+F NL L + L++N L S+++ +F +L + + ++
Sbjct: 872 YMYIYQLDISHNHVT--KSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAH 929
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N + + +F L +L +LDL N+L + FSN+ + L +++N + L
Sbjct: 930 NNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRI---LRINSNRLRALPRE 986
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
+ + LD++ N++ PV +LR + + N +++LDA+ F N L
Sbjct: 987 VFMNTRL--EFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYD 1044
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE-ISMLTGEQFYFSFKLRILNISHNRLRSL 551
+SL N I ++ TF + NL +DLS N ++ E F + +LR L++ H L L
Sbjct: 1045 ISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVL 1104
Query: 552 PRDVFSNTIIEKLDISYN 569
P ++ LD+S N
Sbjct: 1105 PP--LKLPLLSYLDVSGN 1120
Score = 268 (99.4 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 147/604 (24%), Positives = 273/604 (45%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVTKLQ--HLGTTILKGDQLQGIFNSKLR-ELEITGKDLK 57
+T+DLS N L+V L+ + +L+ L +++ Q + + LR LE
Sbjct: 402 VTMDLSSNLLTVFPQQ-LFEQLPELRIVSLRDNLIRSVQWKELQVRPLRMHLERLDLGQN 460
Query: 58 FIDPSAFDNIDACY-DLTLKITNTQ---IEELPSGLFDKIENIEQMTLDLSHNKLSVLNM 113
I+ D Y D+ L+ N + + +LP +F K I + L + N +S ++
Sbjct: 461 CIENLESDYFQQNYSDVHLRALNLEQNFVTQLPEAVF-KATGIAHLVL--AFNAISRVHP 517
Query: 114 ATLYSNVTKLQHLGT-----TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
+ L++L T + N+I+ LN NL + V
Sbjct: 518 SAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQLN-NLPSFTENLRVL 576
Query: 169 AKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFR-HLY--NLQELSLSFNKLQ 225
+ NN + V K N ITD+ +F + NLQ + L NK+
Sbjct: 577 SLSGNNFSMIPVLGL-KNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKIT 635
Query: 226 IIELNSNVFDVFEKLQLLEISFS-LFNSNEFPYYILNKNLNTLE--WLAMDNNNIKNIRN 282
+ L S F E++Q + +SF+ + + + +++ L LE + +++++
Sbjct: 636 HLHLGS--FAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARSLESLDP 693
Query: 283 Y-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE-----LIESDTFY 336
+L L+ L ++ L+ N + ++ N F + L I LS N L+ L +SD
Sbjct: 694 LDALLPLSQLIWLGLDNNNLKQVSNE--SFAQMRELSYINLSFNQLKTLPRGLFQSDAHS 751
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
+L E++ LSYN L+ ++ +F +L ++ + L N+++ I +AF NL L LDL
Sbjct: 752 HLVEID---LSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSY 808
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
N+L + + F+ + + L+L +N + +L ++ +Y+ + + R+ V
Sbjct: 809 NRLVNISHGAFTVLPNLAA---LDLMHNQLCSL----SLKSFLYVSNTT-TPLRLN-VSH 859
Query: 457 NFLQTFADSLRK-LYLDFNEIKHLDAT---AFGNL-DVLELLSLEHNNIAVVVKRTFIGM 511
N + +F D L +Y+ +I H T +F NL + L L+L HN + + F +
Sbjct: 860 NHIASFYDELSSYMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDL 919
Query: 512 PNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDI-SYNQ 570
L+I++++ N ++ L F L+ L++SHN+L L + FSN + KL I N
Sbjct: 920 EFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSN--LRKLRILRINS 977
Query: 571 DKIR 574
+++R
Sbjct: 978 NRLR 981
Score = 264 (98.0 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 142/595 (23%), Positives = 268/595 (45%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGI--FNSKLRELEITGKDLKFID 60
LDL N+L+ + +A S++ L++L T + QL + F LR L ++G + I
Sbjct: 530 LDLERNRLTTVPVAL--SSLHHLKYLYLTSNQISQLNNLPSFTENLRVLSLSGNNFSMIP 587
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLF--DKI-ENIEQMTLDLSHNKLSVLNMATLY 117
N L + + I ++P G+F D N++ T+ L +NK++ L++ + +
Sbjct: 588 VLGLKNYTQLSYLNMGYNS--ITDIPEGIFAVDSWGSNLQ--TILLRNNKITHLHLGS-F 642
Query: 118 SNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLF--RHLQK-----SIVKAK 170
+ + ++Q + + D R KI +L+ +F R L+ +++
Sbjct: 643 AGLEQIQEISLSF-NDITIHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLS 701
Query: 171 KN-----NNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFR---HLYNLQELSLSF 221
+ +NNN QVS+ N++ L LF+ H + L E+ LS+
Sbjct: 702 QLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSH-LVEIDLSY 760
Query: 222 NKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIR 281
N L+ +E + F LQ L + + + + + NL L +L + N + NI
Sbjct: 761 NGLERLE--AQTFHSLGDLQTLNLQSNRLRT--IARHAFH-NLEFLRYLDLSYNRLVNIS 815
Query: 282 NYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL--SNNYLELIESDTFYNLK 339
+ + L +L ++L +N++ + F + + +RL S+N++ D +
Sbjct: 816 HGAFTVLPNLAALDLMHNQLCSLSLKSFLY-VSNTTTPLRLNVSHNHIASFY-DELSSYM 873
Query: 340 ELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+ + +S+N + K+ SF NL N L + L+ NQ+ + +AF +L L L++ N
Sbjct: 874 YIYQLDISHNHVT--KSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNN 931
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNF 458
L F + S Q L+LS+N + L ++ L +++NR++ +P
Sbjct: 932 LTSLRRRSFQGLNSLQ---ELDLSHNQLDQLQVEQFSNLR-KLRILRINSNRLRALP--- 984
Query: 459 LQTFADSLRKLYLDF--NEIKHLDATAFGNLD-VLELLSLEHNNIAVVVKRTFIGMPNLQ 515
+ F ++ R +LD N++ AF ++ L + + HNN+ + FI L
Sbjct: 985 REVFMNT-RLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLY 1043
Query: 516 IIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP-RDVFSNTI-IEKLDISY 568
I L+ N I++L F F L L++S N L + R+VF +T + KL + +
Sbjct: 1044 DISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHH 1098
Score = 212 (79.7 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 111/499 (22%), Positives = 214/499 (42%)
Query: 44 SKLRELEITGKDLKFIDPSAFDNI-DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLD 102
S+L L + +LK + +F + + Y + ++ Q++ LP GLF + + +D
Sbjct: 701 SQLIWLGLDNNNLKQVSNESFAQMRELSY---INLSFNQLKTLPRGLFQSDAHSHLVEID 757
Query: 103 LSHNKLSVLNMATLYSNVTKLQHLGT------TILKDREKXXXXXXXXXXRCNKITDLNG 156
LS+N L L T +S + LQ L TI + N++ +++
Sbjct: 758 LSYNGLERLEAQTFHS-LGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISH 816
Query: 157 NLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCN----KITDLNGNLFRHLY 212
F L + A +N +S + R N I L ++Y
Sbjct: 817 GAFTVLPN--LAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMY 874
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
+ +L +S N + + +N+ + L L S+ F +L LE L +
Sbjct: 875 -IYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFG------DLEFLEILNV 927
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+NN+ ++R S L SL ++L +N++ ++ F N+ K L+ +R+++N L +
Sbjct: 928 AHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFS-NLRK-LRILRINSNRLRALPR 985
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNML-NIVLSFNQIKYIYPNAFVNLPNLVK 391
+ F N + L + ++ N L +F ++ L +I +S N ++Y+ + F+N L
Sbjct: 986 EVFMNTR-LEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYD 1044
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI--TNLYENDKKQAPIYIKSLDLSNN 449
+ L N++ N FS + + NL+LS N + TNL E P ++ L L +
Sbjct: 1045 ISLARNRITILPDNTFSFLNNLT---NLDLSQNPLVTTNLREVFV-HTP-RLRKLSLHHM 1099
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+ +P L + YLD + + + G+L L +++ HN +
Sbjct: 1100 GLYVLPPLKLPLLS------YLDVSGNYLQELSPLGSLRHLRHVNVSHNKLTNASCAAEH 1153
Query: 510 GMPNLQIIDLSFNEISMLT 528
P+++++DL+ N + +T
Sbjct: 1154 LPPSVRVLDLAHNPLRRIT 1172
Score = 202 (76.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 127/587 (21%), Positives = 259/587 (44%)
Query: 18 LYSNVTKLQHLGTTILKGDQ--LQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTL 75
++S+V ++ T + D QG+ +L+ L++ +L+ I +F + +TL
Sbjct: 208 MHSSVRYIEMSNTHLQSVDDETFQGL---RLKTLKLIDNELQDISERSFSTMTHSL-MTL 263
Query: 76 KITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQH--LGTTILKD 133
I+ +++ LP ++ ++ ++ +H + TL N QH L + L D
Sbjct: 264 DISGNKMQHLPLDALQRLHSLSRLVAQRNH-------ITTLDGN-WDAQHDTLRSLHLSD 315
Query: 134 REKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXX 193
+ ++ N N + + V+ + +N+ S
Sbjct: 316 NDITEVAPGGGSI---EVVSQNDNSSQPSSLAAVQTRLETSNSIYPPSPSSGDRTTGGRP 372
Query: 194 XXRCNKIT--DLNGNLFRHL---Y---NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
+ K+ DL+ N H+ Y +L + LS N L + +F+ +L+++ +
Sbjct: 373 FEQLQKLLWLDLSNNRIYHVAGNYLPRSLVTMDLSSNLLTVFP--QQLFEQLPELRIVSL 430
Query: 246 SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRN-YSLYNLTS--LNYINLEYNKIS 302
+L S ++ + LE L + N I+N+ + Y N + L +NLE N ++
Sbjct: 431 RDNLIRSVQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVT 490
Query: 303 KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE-LNTITLSYNLLKSIKTTSFKN 361
++ +F + + L+ N + + F L E L + L N L ++ + +
Sbjct: 491 QLPEAVFKAT---GIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPV-ALSS 546
Query: 362 LNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ-TPMN-L 419
L+++ + L+ NQI + N NLP+ + +L+ L N ++ + K T ++ L
Sbjct: 547 LHHLKYLYLTSNQISQL--N---NLPSFTE-NLRVLSLSGNNFSMIPVLGLKNYTQLSYL 600
Query: 420 NLSNNYITNLYEN--DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFA--DSLRKLYLDFNE 475
N+ N IT++ E ++++ L NN+I + L +FA + ++++ L FN+
Sbjct: 601 NMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHL---HLGSFAGLEQIQEISLSFND 657
Query: 476 IKHLDATAFGNLD-VLELLSLEHNNIAVVVKRTFIGM-------PNLQIIDLSF--NEIS 525
I F N+ L++L L + AV R+ + P Q+I L N +
Sbjct: 658 ITIHHPLVFENVSRTLKILEL---SFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLK 714
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVF---SNTIIEKLDISYN 569
++ E F +L +N+S N+L++LPR +F +++ + ++D+SYN
Sbjct: 715 QVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYN 761
Score = 194 (73.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 76/312 (24%), Positives = 162/312 (51%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL NTL +L + +N + ++++++ +L L +N+ +N ++ + F ++ L+E+
Sbjct: 893 NLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQ-GLNS-LQELD 950
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQIKYIYP 380
LS+N L+ ++ + F NL++L + ++ N L+++ F +N L + ++ NQ+ ++P
Sbjct: 951 LSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVF--MNTRLEFLDIAENQLS-VWP 1007
Query: 381 -NAFVNLP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
AF ++ L + + N L+ + ++F N Q +++L+ N IT L +N
Sbjct: 1008 VPAFTDIGFTLRSIQMSHNNLEYLDASMFIN---SQFLYDISLARNRITILPDNTFSFLN 1064
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADS--LRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
+ +LDLS N + V N + F + LRKL L + L L +L L +
Sbjct: 1065 -NLTNLDLSQNPL--VTTNLREVFVHTPRLRKLSLHHMGLYVLPPL---KLPLLSYLDVS 1118
Query: 497 HNNIAVVVKRTFIG-MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP-RD 554
N + + +G + +L+ +++S N+++ + + +R+L+++HN LR + D
Sbjct: 1119 GNYLQELSP---LGSLRHLRHVNVSHNKLTNASCAAEHLPPSVRVLDLAHNPLRRITLHD 1175
Query: 555 VFSNTIIEKLDI 566
+ S + +L+I
Sbjct: 1176 LASLRHLAELNI 1187
Score = 155 (59.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 34/120 (28%), Positives = 66/120 (55%)
Query: 14 NMATLYSNVTKLQHLGTTILKGDQLQGIF-----NSKLRELEITGKDLKFIDPSAFDNID 68
N+ + + + LQ L L+ + Q +F N+K+R LE+ G +++ I P F +
Sbjct: 1214 NLGEIVARIPGLQQLRVHCLEPNIGQQLFAKLANNTKIRLLELYGSNVQTIAPDVFTGLS 1273
Query: 69 ACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT 128
L +KI++T+I +LP G+F + + +++D+SHN+++ L + Y N + +GT
Sbjct: 1274 RSQRLQVKISHTRISDLPPGIFYALREVPHLSIDISHNRINALAADSFYPNKSYWDAVGT 1333
Score = 150 (57.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 76/320 (23%), Positives = 135/320 (42%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
+++ ++ M N +++++ + + L L + L N++ I F H L + +S
Sbjct: 210 SSVRYIEMSNTHLQSVDDETFQGLR-LKTLKLIDNELQDISERSFSTMTHS-LMTLDISG 267
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N ++ + D L L+ + N + ++ + + ++ LS N I + P
Sbjct: 268 NKMQHLPLDALQRLHSLSRLVAQRNHITTLDGNWDAQHDTLRSLHLSDNDITEVAPGG-- 325
Query: 385 NLPNLVKLDLQDNKLKDFNLN-VFSNI-TSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
++ + DN + +L V + + TS S + T ++ Q ++
Sbjct: 326 --GSIEVVSQNDNSSQPSSLAAVQTRLETSNSIYPPSPSSGDRTTGGRPFEQLQKLLW-- 381
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
LDLSNNRI V N+L SL + L N + F L L ++SL N I
Sbjct: 382 -LDLSNNRIYHVAGNYLPR---SLVTMDLSSNLLTVFPQQLFEQLPELRIVSLRDNLIRS 437
Query: 503 VVKRTFIGMP---NLQIIDLSFNEISMLTGEQF---YFSFKLRILNISHNRLRSLPRDVF 556
V + P +L+ +DL N I L + F Y LR LN+ N + LP VF
Sbjct: 438 VQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVTQLPEAVF 497
Query: 557 SNTIIEKLDISYNQ-DKIRP 575
T I L +++N ++ P
Sbjct: 498 KATGIAHLVLAFNAISRVHP 517
Score = 149 (57.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 67/276 (24%), Positives = 134/276 (48%)
Query: 302 SKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKN 361
S +H F F +H ++ I +SN +L+ ++ +TF L+ L T+ L N L+ I SF
Sbjct: 200 SLVHR--FEF-MHSSVRYIEMSNTHLQSVDDETFQGLR-LKTLKLIDNELQDISERSFST 255
Query: 362 L-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
+ ++++ + +S N+++++ +A L +L +L Q N + + N + T +L+
Sbjct: 256 MTHSLMTLDISGNKMQHLPLDALQRLHSLSRLVAQRNHITTLDGNWDAQ---HDTLRSLH 312
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY--LDFNEIKH 478
LS+N IT + I+ + ++N Q + +QT ++ +Y + +
Sbjct: 313 LSDNDITEVAPGGGS-----IEVVSQNDNSSQPSSLAAVQTRLETSNSIYPPSPSSGDRT 367
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP-NLQIIDLSFNEISMLTGEQFYFSFK 537
F L L L L +N I V +P +L +DLS N +++ + F +
Sbjct: 368 TGGRPFEQLQKLLWLDLSNNRIYHVAGNY---LPRSLVTMDLSSNLLTVFPQQLFEQLPE 424
Query: 538 LRILNISHNRLRSLP-RDVFSNTI---IEKLDISYN 569
LRI+++ N +RS+ +++ + +E+LD+ N
Sbjct: 425 LRIVSLRDNLIRSVQWKELQVRPLRMHLERLDLGQN 460
Score = 144 (55.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 121/577 (20%), Positives = 243/577 (42%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ-GIFN--SKLRELEITGKDLKF 58
TL+L N+L + + N+ L++L + + + G F L L++ L
Sbjct: 779 TLNLQSNRLRTIARHAFH-NLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCS 837
Query: 59 IDPSAFDNI-DACYDLTLKITNTQIEELPSGLFDKIENIEQM-TLDLSHNKLSVLNMATL 116
+ +F + + L L +++ I + +D++ + + LD+SHN ++ + T
Sbjct: 838 LSLKSFLYVSNTTTPLRLNVSHNHI----ASFYDELSSYMYIYQLDISHNHVTKSDSFTN 893
Query: 117 YSNVTKLQHLGTTILKDREKXXXXXXXXXXRCN----KITDLNGNLFRHLQKSIVKAKKN 172
+N + +L L + N +T L F+ L ++
Sbjct: 894 LANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNS--LQELDL 951
Query: 173 NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232
++N DQ+ + R +I +N N R L +E+ ++ +L+ +++ N
Sbjct: 952 SHNQLDQLQVEQ-------FSNLRKLRILRINSNRLRALP--REVFMN-TRLEFLDIAEN 1001
Query: 233 VFDVFEKLQLLEISFSL----FNSNEFPYYILNKNLNT--LEWLAMDNNNIKNIRNYSLY 286
V+ +I F+L + N Y + +N+ L +++ N I + + +
Sbjct: 1002 QLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFS 1061
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHK-RLKEIRLSNNYLELIESDTFYNLKELNTIT 345
L +L ++L N + + NL +H RL+++ L + L ++ L L+ +
Sbjct: 1062 FLNNLTNLDLSQNPL--VTTNLREVFVHTPRLRKLSLHHMGLYVLPP---LKLPLLSYLD 1116
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK-LDLQDNKLKDFNL 404
+S N L+ + +L ++ ++ +S N++ A +LP V+ LDL N L+ L
Sbjct: 1117 VSGNYLQELSPLG--SLRHLRHVNVSHNKLTNA-SCAAEHLPPSVRVLDLAHNPLRRITL 1173
Query: 405 NVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN-RIQEVPVNFLQTFA 463
+ ++ S + LN+ + +TN K ++ ++ L S++ + E+
Sbjct: 1174 H---DLASLRHLAELNILDVKVTNPQAFSKLRS---LRKLHASSHANLGEIVARI--PGL 1225
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID--LSF 521
LR L+ N + L A N + LL L +N+ + F G+ Q + +S
Sbjct: 1226 QQLRVHCLEPNIGQQLFAKLANNTKI-RLLELYGSNVQTIAPDVFTGLSRSQRLQVKISH 1284
Query: 522 NEISMLTGEQFYFSFKLRILNI--SHNRLRSLPRDVF 556
IS L FY ++ L+I SHNR+ +L D F
Sbjct: 1285 TRISDLPPGIFYALREVPHLSIDISHNRINALAADSF 1321
Score = 47 (21.6 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 1 MTLDLSHNKLSVLNMATLYS--NVTKL--QHLGTTILKGDQLQGIFNSKLRELEITGKDL 56
MTLD+S NK+ L + L ++++L Q T L G+ + LR L ++ D+
Sbjct: 261 MTLDISGNKMQHLPLDALQRLHSLSRLVAQRNHITTLDGNW--DAQHDTLRSLHLSDNDI 318
Query: 57 KFIDP 61
+ P
Sbjct: 319 TEVAP 323
>FB|FBgn0000313 [details] [associations]
symbol:chp "chaoptic" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS;IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA] [GO:0042051 "compound
eye photoreceptor development" evidence=NAS] [GO:0042052
"rhabdomere development" evidence=IGI] [GO:0016028 "rhabdomere"
evidence=IDA] Pfam:PF00560 InterPro:IPR000225 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005886 GO:GO:0007601
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050896
GO:GO:0007156 GO:GO:0016028 HOGENOM:HOG000265621 GO:GO:0042052
GeneTree:ENSGT00700000104056 EMBL:M19017 EMBL:M19008 EMBL:M19009
EMBL:M19010 EMBL:M19011 EMBL:M19012 EMBL:M19013 EMBL:M19014
EMBL:M19016 EMBL:K03274 PIR:A29944 RefSeq:NP_524605.1
UniGene:Dm.21698 ProteinModelPortal:P12024 SMR:P12024 STRING:P12024
PaxDb:P12024 PRIDE:P12024 EnsemblMetazoa:FBtr0085778
EnsemblMetazoa:FBtr0330099 GeneID:43690 KEGG:dme:Dmel_CG1744
CTD:64152 FlyBase:FBgn0000313 InParanoid:P12024 OMA:LSHNDEL
OrthoDB:EOG4VQ844 PhylomeDB:P12024 ChiTaRS:CHP GenomeRNAi:43690
NextBio:835267 Bgee:P12024 GermOnline:CG1744 Uniprot:P12024
Length = 1315
Score = 426 (155.0 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 114/378 (30%), Positives = 196/378 (51%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYI 259
++ + + F+H+ L+ L S N + IE N ++ L L++S ++ + P
Sbjct: 464 LSGIQSHAFKHVRGLKRLDFSENGISSIE-NDAFHEIGHSLISLKMSHG-YSGSALPAEP 521
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
L ++L +L+ L NN+I ++ + S + L +L + L N+I ++ F +IH +L+E
Sbjct: 522 L-RHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEE 580
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
I L N+L I TF++L+ L + L N + I+ +F NL+ + + L N+I +
Sbjct: 581 ISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLA 640
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK----- 434
+F NLP L LD+ N+L +FN + F + + +N+N+S+N I L N
Sbjct: 641 DESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSN-LNVNVSHNQIRQLMYNSSWSGRN 699
Query: 435 KQAPIY---IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+ +Y IK LDLS+N I + + + SL L+L +N + + FGN+ L+
Sbjct: 700 EHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQ 759
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L +N I + F LQ++ N +S + + F LRI++ SHN LR L
Sbjct: 760 WLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGL 819
Query: 552 PRDVFSNTIIEKLDISYN 569
P ++F N +EKLD+S+N
Sbjct: 820 PDNLFYNGGMEKLDVSHN 837
Score = 275 (101.9 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 126/530 (23%), Positives = 241/530 (45%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQI-EELPSGLFDKIENIEQMTLDLS 104
L+ L+ + + I+ AF I ++LK+++ LP+ + ++++ LD S
Sbjct: 478 LKRLDFSENGISSIENDAFHEIGHSL-ISLKMSHGYSGSALPAEPLRHLTSLQE--LDFS 534
Query: 105 HNKLSVLNMATLY--SNVTKLQ-HLGTT--ILKD--REKXXXXXXXXXXRCNKITDLNGN 157
+N +S ++ + + N+ L+ H +LK + R N +T ++ +
Sbjct: 535 NNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQH 594
Query: 158 LFRHLQKSIVKAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQE 216
F L+ ++ ++N D++ R R NKI +L F++L L+
Sbjct: 595 TFFDLEA--LRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEI 652
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-------LFNS-----NEFPYYILNKNL 264
L ++FN+L N + FD L L ++ S ++NS NE + + N+
Sbjct: 653 LDMAFNQLP--NFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGG-MYHSNI 709
Query: 265 NTLEWLAMDNNNIKNIR-NYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L+ + +NNI I Y SL +++L YN + ++F H L+ + LS
Sbjct: 710 KILD---LSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPH--LQWLDLS 764
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N++ ++ D F N K+L + +N L I FK + + + S N ++ + N F
Sbjct: 765 YNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNLF 824
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
N + KLD+ N + + S++ + T L+LSNN+I+ ++ D ++
Sbjct: 825 YN-GGMEKLDVSHNMMLKIPSSSLSSLAAL-TLCELHLSNNFISTIHSMDLSNKFRSLRY 882
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFN-EIKHLDATAFGNLDVLELLSLEHNNIAV 502
LD+S N + + T L L L N ++K +D + G + L L LE+ +++
Sbjct: 883 LDISYNYLLRIDDAVFATMP-KLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENISLST 941
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
V + I + L+ L +NE+ + E + LR+L++S+N L ++P
Sbjct: 942 VPE---IRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLTNVP 988
Score = 245 (91.3 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 104/441 (23%), Positives = 200/441 (45%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQV-SDREKXXXXXXXXXXRCNKITDLNGNL 207
N I+ + + F + S++ K ++ + + ++ + N I+ ++
Sbjct: 486 NGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTS 545
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS-NEFPYYILNKNLNT 266
F L NL+ L L N+++ + + D+ KL+ + + F+ S ++ ++ +L
Sbjct: 546 FHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFF----DLEA 601
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L L +D+N I I + NL L Y++L NKI+ + + F N+ K L+ + ++ N
Sbjct: 602 LRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQ-NLPK-LEILDMAFNQ 659
Query: 327 LELIESDTFYNLKELNT--ITLSYNLLKSIK-TTSFKNLN--------NMLNIVLSFNQI 375
L D F + L+ + +S+N ++ + +S+ N N+ + LS N I
Sbjct: 660 LPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNI 719
Query: 376 KYIYPNAFVNLP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
I+P F +L L L N L + +VF N+ Q L+LS N+I L + D
Sbjct: 720 SIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQW---LDLSYNWIHEL-DFDA 775
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
+ ++ + +N + ++P + + LR + N ++ L F N +E L
Sbjct: 776 FKNTKQLQLVFFGHNYLSDIPQDIFKP-VQGLRIVDFSHNHLRGLPDNLFYN-GGMEKLD 833
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDL--SFNEISMLTGEQFYFSFK-LRILNISHNRLRSL 551
+ HN + + + + L + +L S N IS + F+ LR L+IS+N L +
Sbjct: 834 VSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSLRYLDISYNYLLRI 893
Query: 552 PRDVFSNTI-IEKLDISYNQD 571
VF+ + LD+S+N+D
Sbjct: 894 DDAVFATMPKLAVLDLSHNRD 914
Score = 215 (80.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 141/602 (23%), Positives = 252/602 (41%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHL---GTTILKGDQ---LQGIFNSKLRELEITGKD 55
TL L N +S L M+ +S + L+ L G + + D + G+ +L L +T
Sbjct: 180 TLILRENCISQL-MSHSFSGLLILETLDLSGNNLFEIDPNVFVDGM--PRLTRLLLTDNI 236
Query: 56 LKFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLD---LSHNKLSVL 111
L I P +D + L TL I++ I L +I+ ++ LD L +N + VL
Sbjct: 237 LSEI-P--YDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVL 293
Query: 112 --NMATLYSNVTKLQHLGT---TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSI 166
N + V + G T+ +D K C +T+++ F L S+
Sbjct: 294 PPNSFKYFDTVNRTFFDGNPIHTLREDAFKPARIREIYMRYCG-LTNISPVAFDSLVNSL 352
Query: 167 VKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKIT-DLNGNLFRHL-YNLQELSLSFNKL 224
+ NN R NKI F + Y L +L LS ++
Sbjct: 353 QILDLSGNNLTKLHHKLFNNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRN 412
Query: 225 QIIELNSNVFDVFEKLQLLEISFSLFNSNEF-PYYILNKNLNTLEWLAMDNNNIKNIRNY 283
L + + ++ + +S S S+ P + + LE L + ++ I+++
Sbjct: 413 DPTNLQT-LRNMTRMRNMRSLSISRLGSSSVGPEDFKDFGVE-LEDLQITRASLSGIQSH 470
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL-ELIESDTFYNLKELN 342
+ ++ L ++ N IS I N+ FH I L +++S+ Y + ++ +L L
Sbjct: 471 AFKHVRGLKRLDFSENGISSIENDAFH-EIGHSLISLKMSHGYSGSALPAEPLRHLTSLQ 529
Query: 343 TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN--LPNLVKLDLQDNKLK 400
+ S N + S+ TSF L N+ + L N+I+ + F L ++ L+ N L
Sbjct: 530 ELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLT 589
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQ 460
+ + F ++ + + L+L +N I + E ++ L L N+I + Q
Sbjct: 590 SISQHTFFDLEALR---KLHLDDNKIDKI-ERRAFMNLDELEYLSLRGNKINNLADESFQ 645
Query: 461 TFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE--HNNIAVVV-------KRTFIGM 511
L L + FN++ + + F + L L++ HN I ++ + GM
Sbjct: 646 NLP-KLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGM 704
Query: 512 --PNLQIIDLSFNEISMLTGEQFY-FSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDIS 567
N++I+DLS N IS++ F L L++ +N L + RDVF N ++ LD+S
Sbjct: 705 YHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLS 764
Query: 568 YN 569
YN
Sbjct: 765 YN 766
Score = 203 (76.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 84/329 (25%), Positives = 159/329 (48%)
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
FP N + + L M+N ++ I Y L + T + + + N +++I ++ F +
Sbjct: 69 FPALPRMVNQSKVFMLHMENTGLREIEPYFLQS-TGMYRLKISGNHLTEIPDDAFT-GLE 126
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLN-IVLSFN 373
+ L E+ L N L I S + +L++L + L YN + I+ SF+ L + L ++L N
Sbjct: 127 RSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILREN 186
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL-YEN 432
I + ++F L L LDL N L + + NVF + + T L L++N ++ + Y+
Sbjct: 187 CISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPRLT--RLLLTDNILSEIPYD- 243
Query: 433 DKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADS----LRKLYLDFNEIKHLDATAFGNL 487
P+ +++LD+S+N I + N S L L+L++N I+ L +F
Sbjct: 244 --ALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYF 301
Query: 488 DVLELLSLEHNNIAVVVKRTFIGMP-NLQIIDLSFNEISMLTGEQF-YFSFKLRILNISH 545
D + + N I + + F P ++ I + + ++ ++ F L+IL++S
Sbjct: 302 DTVNRTFFDGNPIHTLREDAF--KPARIREIYMRYCGLTNISPVAFDSLVNSLQILDLSG 359
Query: 546 NRLRSLPRDVFSNTIIEKLDISYNQDKIR 574
N L L +F+N + ++ IS +KI+
Sbjct: 360 NNLTKLHHKLFNNFDVLRV-ISMRDNKIK 387
Score = 197 (74.4 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 133/575 (23%), Positives = 243/575 (42%)
Query: 3 LDLSHNKLSVLNMATLY----SNVT-KLQH-LGTTILKGDQLQGIFNSKLRELEITGKDL 56
LD S N +S + + S ++ K+ H + L + L+ + + L+EL+ + +
Sbjct: 481 LDFSENGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHL--TSLQELDFSNNHI 538
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLF--DKIENIEQMTLDLSHNKLSVLNMA 114
+ ++F + L++ + +IE++ G F D +E+++L +H L+ ++
Sbjct: 539 SSMSDTSFHFLKNLR--LLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNH--LTSISQH 594
Query: 115 TLYS-NVTKLQHLGTTILKDREKXXXXXXXX----XXRCNKITDLNGNLFRHLQK-SIVK 168
T + + HL + E+ R NKI +L F++L K I+
Sbjct: 595 TFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILD 654
Query: 169 AKKN---NNNNE--DQVSDREKXXXXXXXXXXRCNKITDLNGNLFRH--LY--NLQELSL 219
N N N + DQV R H +Y N++ L L
Sbjct: 655 MAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDL 714
Query: 220 SFNKLQIIELNSNVFDVFE-KLQLLEISF-SLFNSNEFPYYILNKNLNTLEWLAMDNNNI 277
S N + II + F E L L + + SL N+ + N+ L+WL + N I
Sbjct: 715 SHNNISII--HPGYFRPAEISLTHLHLGYNSLMNTTRDVF----GNMPHLQWLDLSYNWI 768
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
+ + N L + +N +S I ++F + L+ + S+N+L + + FYN
Sbjct: 769 HELDFDAFKNTKQLQLVFFGHNYLSDIPQDIF--KPVQGLRIVDFSHNHLRGLPDNLFYN 826
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLN--NMLNIVLSFNQIKYIYPNAFVN-LPNLVKLDL 394
+ + +S+N++ I ++S +L + + LS N I I+ N +L LD+
Sbjct: 827 -GGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSLRYLDI 885
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
N L + VF+ + L+LS+N + + + L L N + V
Sbjct: 886 SYNYLLRIDDAVFATMPKLAV---LDLSHNRDLKVMDKSFMGLENSLIKLGLENISLSTV 942
Query: 455 PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNL 514
P L+ LR+ L +NE+ + N+ L +L L +N++ V T +P+L
Sbjct: 943 PEIRLKY----LREFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLTNVPLMTQ-ALPHL 997
Query: 515 QIIDLSFNEISMLTGEQFY-FSFKLRILNISHNRL 548
+ + LS N I+ L F + L +L+IS+ RL
Sbjct: 998 RRLMLSGNPITSLNNNSFDGVNEDLEMLDISNFRL 1032
Score = 195 (73.7 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 104/415 (25%), Positives = 171/415 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N + ++ RHLQK N+ Q R N I+ L + F
Sbjct: 137 NDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSF 196
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVF-DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
L L+ L LS N L E++ NVF D +L L ++ ++ + E PY L L +L
Sbjct: 197 SGLLILETLDLSGNNL--FEIDPNVFVDGMPRLTRLLLTDNILS--EIPYDALGP-LKSL 251
Query: 268 EWLAMDNNNIKNIRNYSLYNL---TSLNYINL--EYNKISKIHNNLFHFNIHKRLKEIRL 322
L + +N I ++ Y + T LN NL EYN I + N F + +
Sbjct: 252 RTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKY--FDTVNRTFF 309
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQIKYIYPN 381
N + + D F + + I + Y L +I +F +L N L I+ LS N + ++
Sbjct: 310 DGNPIHTLREDAFKPAR-IREIYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHHK 368
Query: 382 AFVNLPNLVKLDLQDNKLK-DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
F N L + ++DNK+K F+ + ++L+ N TNL
Sbjct: 369 LFNNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRNDPTNLQTLRNMTRMRN 428
Query: 441 IKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++SL +S V P +F + F L L + + + + AF ++ L+ L N
Sbjct: 429 MRSLSISRLGSSSVGPEDF-KDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDFSENG 487
Query: 500 IAVVVKRTF--IGMPNLQIIDLSFNEI-SMLTGEQFYFSFKLRILNISHNRLRSL 551
I+ + F IG +L + +S S L E L+ L+ S+N + S+
Sbjct: 488 ISSIENDAFHEIGH-SLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSM 541
Score = 174 (66.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 126/520 (24%), Positives = 213/520 (40%)
Query: 3 LDLSHNKLSVLNMATLYSNV-TKLQHLGTTI--LKGDQLQGIFNSK-LRELEITGKDLKF 58
L+L N++ + T ++ +KL+ + L F+ + LR+L + +
Sbjct: 555 LELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDK 614
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
I+ AF N+D L+L+ +I L F + +E LD++ N+L N +
Sbjct: 615 IERRAFMNLDELEYLSLR--GNKINNLADESFQNLPKLE--ILDMAFNQLPNFNF-DYFD 669
Query: 119 NVTKLQHLGTTILKDREKXXXXXXXXXXR--------CN-KITDLNGN--------LFRH 161
V L +L + ++ + R N KI DL+ N FR
Sbjct: 670 QVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRP 729
Query: 162 LQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSF 221
+ S+ N+ + D N I +L+ + F++ LQ +
Sbjct: 730 AEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGH 789
Query: 222 NKLQIIELNSNVFDVFEKLQLLEI-SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
N L I D+F+ +Q L I FS + P + +E L + +N + I
Sbjct: 790 NYLSDIPQ-----DIFKPVQGLRIVDFSHNHLRGLPDNLFYNG--GMEKLDVSHNMMLKI 842
Query: 281 RNYSLYNLTSLNY--INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
+ SL +L +L ++L N IS IH+ + N + L+ + +S NYL I+ F +
Sbjct: 843 PSSSLSSLAALTLCELHLSNNFISTIHS-MDLSNKFRSLRYLDISYNYLLRIDDAVFATM 901
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY-IYPNAFVNLPNLVKLDLQDN 397
+L + LS+N + SF L N L I L I P + L L + L N
Sbjct: 902 PKLAVLDLSHNRDLKVMDKSFMGLENSL-IKLGLENISLSTVPE--IRLKYLREFRLGYN 958
Query: 398 KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN 457
+L + N+++ + L+LSNN +TN+ QA +++ L LS N I + N
Sbjct: 959 ELPSIPQELAHNMSNLRM---LDLSNNDLTNVPL--MTQALPHLRRLMLSGNPITSLNNN 1013
Query: 458 FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL-ELLSLE 496
+ L L D + + L +G LD L L SL+
Sbjct: 1014 SFDGVNEDLEML--DISNFR-LHYFEYGCLDSLPHLRSLK 1050
Score = 141 (54.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 83/375 (22%), Positives = 159/375 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS--NVFDVFEKLQLLEISFSLFNSNEF 255
N + ++ RHL L+ L L +N + I+ +S + D + L L E S S+ F
Sbjct: 137 NDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSF 196
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIR-NYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
L LE L + NN+ I N + + L + L N +S+I +
Sbjct: 197 ------SGLLILETLDLSGNNLFEIDPNVFVDGMPRLTRLLLTDNILSEIPYDAL--GPL 248
Query: 315 KRLKEIRLSNNYLELIESDTFYNLK-----ELNTITLSYNLLKSIKTTSFKNLNNMLNIV 369
K L+ + +S+N + + + Y +K L+ + L YN ++ + SFK + +
Sbjct: 249 KSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTF 308
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
N I + +AF + ++ ++ L + + F ++ + L+LS N +T L
Sbjct: 309 FDGNPIHTLREDAF-KPARIREIYMRYCGLTNISPVAFDSLVNSL--QILDLSGNNLTKL 365
Query: 430 YENDKKQAPIYIKSLDLSNNRIQ-EVPVNFLQTFADSLRKLYL--DFNEIKHLDA----T 482
+ + ++ + + +N+I+ + P +L KL L D N+ +L T
Sbjct: 366 HHKLFNNFDV-LRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRNDPTNLQTLRNMT 424
Query: 483 AFGNLDVLELLSLEHNNIAVVVKRTF-IGMPNLQIIDLSFNEISMLTGEQFYFSFKLRIL 541
N+ L + L +++ + F + + +LQI S +S + F L+ L
Sbjct: 425 RMRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRAS---LSGIQSHAFKHVRGLKRL 481
Query: 542 NISHNRLRSLPRDVF 556
+ S N + S+ D F
Sbjct: 482 DFSENGISSIENDAF 496
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 51/200 (25%), Positives = 93/200 (46%)
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F+ + +L + N L + + F+ + +++ L L N + + + ++
Sbjct: 98 FLQSTGMYRLKISGNHLTEIPDDAFTGL--ERSLWELILPQNDLVEIPSKSLRHLQ-KLR 154
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
LDL N I + + + DSL+ L L N I L + +F L +LE L L NN+
Sbjct: 155 HLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFE 214
Query: 503 VVKRTFI-GMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR----DVFS 557
+ F+ GMP L + L+ N +S + + LR L+ISHN + SL ++ +
Sbjct: 215 IDPNVFVDGMPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKA 274
Query: 558 NTII--EKLDISYNQDKIRP 575
+T + + L + YN ++ P
Sbjct: 275 STKLNLDNLHLEYNHIEVLP 294
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 66/278 (23%), Positives = 121/278 (43%)
Query: 210 HLYNLQELSLSFNKLQ--IIELN-SNV-FDVFEKLQLLEISFSLFNSNEFPYYI--LNKN 263
H +L+ + SF L+ +I+L N+ +++L + NE P L N
Sbjct: 911 HNRDLKVMDKSFMGLENSLIKLGLENISLSTVPEIRLKYLREFRLGYNELPSIPQELAHN 970
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
++ L L + NN++ N+ + L L + L N I+ ++NN F +++ L+ + +S
Sbjct: 971 MSNLRMLDLSNNDLTNVPLMT-QALPHLRRLMLSGNPITSLNNNSFD-GVNEDLEMLDIS 1028
Query: 324 NNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
N L E +L L ++ L+ Y+ L+ N+ ++L + Q+ P
Sbjct: 1029 NFRLHYFEYGCLDSLPHLRSLKLTAYSHLEHF------NIPHLLRHHYNIRQLWIEAPQP 1082
Query: 383 FVNL------PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK- 435
F + P LQ D + ++ SK T N+ S TNL E +
Sbjct: 1083 FTRIVKKGSGPTQEMQTLQLGNPTDLQREMEGHLPSKLT--NITFSGPQFTNLNERILRG 1140
Query: 436 -QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
++P Y+ + L N +Q +P NF + + +R + LD
Sbjct: 1141 MRSP-YLY-MQLFNTSLQALPPNFFK-YMGRVRNISLD 1175
Score = 54 (24.1 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 27 HLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNID-ACYDLTLKITNTQIEEL 85
H+ T L+ + + ++ + L+I+G L I AF ++ + ++L L + E+
Sbjct: 85 HMENTGLREIEPYFLQSTGMYRLKISGNHLTEIPDDAFTGLERSLWELILP--QNDLVEI 142
Query: 86 PSGLFDKIENIEQMTLDLSHNKLS 109
PS ++ + LDL +N ++
Sbjct: 143 PSKSLRHLQKLRH--LDLGYNHIT 164
Score = 54 (24.1 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL 103
SK+ L + L+ I+P F Y LKI+ + E+P F +E L L
Sbjct: 79 SKVFMLHMENTGLREIEPY-FLQSTGMY--RLKISGNHLTEIPDDAFTGLER-SLWELIL 134
Query: 104 SHNKLSVLNMATLYSNVTKLQHL 126
N L + +L ++ KL+HL
Sbjct: 135 PQNDLVEIPSKSL-RHLQKLRHL 156
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 379 (138.5 bits), Expect = 4.4e-32, P = 4.4e-32
Identities = 146/556 (26%), Positives = 262/556 (47%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDL 103
KL+ L++ G L+ + + F N+ L I++ QI++L + I ++ ++ ++
Sbjct: 199 KLKTLDLHGNQLENLKRNQFKNLRELE--VLDISHNQIKKLEA---QHIADLTKLGWCNV 253
Query: 104 SHNKLSVLNMATLYSN-VTKLQHLGTTILKDREKXXXXXXXXXXRC----NKITDLNGNL 158
SHN LS L+ T N V K+ HL + + R N +TD+
Sbjct: 254 SHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGT 313
Query: 159 FRHLQK--SIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQE 216
F + + +I A+ E Q+ + N IT + N F+ +Y
Sbjct: 314 FGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAE---NNITKIEKNSFKDIYQAI- 369
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFPYYILNKNLNTLEWLAMDNN 275
+++S N L++IE + F+ + +L++S + L N + + + + N
Sbjct: 370 INVSHNALELIE--TAAFENCVNITVLDLSHNRLANFSRRSF----DETTFATYFQLSYN 423
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
N+ N+ + N+T L +N YN I++I N F +++ L I +S+N + I + F
Sbjct: 424 NLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFP-KLYE-LHTIDVSHNNISSIFNGVF 481
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
L L +I LS+N ++ IK+++F L +L + LS N++ + + L +L +L L
Sbjct: 482 QTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLN 541
Query: 396 DNKLKD------------FNLNVFSNITSKQTP-MN----LNLSNNYITNLYENDKKQAP 438
+N+L+ F+ N +NI S P MN L+LS+N + + +
Sbjct: 542 NNQLEKLFQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGL 601
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+ ++ L L NN I + P + + + +L+ L+L+ N I L+ +AFG L VL L+L N
Sbjct: 602 LVVQRLKLQNNGISQPPKDAVAVMS-TLQYLHLENNNITTLERSAFGKLPVLFELNLYGN 660
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD---V 555
+ + KR F G+ L ++LS N I L + F LR L++S N L L V
Sbjct: 661 QVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGV 720
Query: 556 FSNTI-IEKLDISYNQ 570
+ + +E LD+S+N+
Sbjct: 721 LDDLLSLETLDLSHNR 736
Score = 363 (132.8 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 151/585 (25%), Positives = 265/585 (45%)
Query: 4 DLSHNKLSVLNMATLYSN-VTKLQHLG-TTI--LKGDQLQGIFNSKLRELEITGKDLKFI 59
++SHN LS L+ T N V K+ HL I L + +G+ LR L ++ L I
Sbjct: 252 NVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGM--RFLRRLFLSDNVLTDI 309
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL---NMATL 116
F +I T+ + +++++ +F ++ +E LDL+ N ++ + + +
Sbjct: 310 GRGTFGSIARIG--TIDLARNRLKKIEFQMFTQMNYVE--LLDLAENNITKIEKNSFKDI 365
Query: 117 YSNVTKLQHLGTTILKDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLQ-KSIVKAKKNNN 174
Y + + H +++ + N++ + + F + + NN
Sbjct: 366 YQAIINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNL 425
Query: 175 NNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVF 234
N Q+ + N IT++ N F LY L + +S N + I N VF
Sbjct: 426 TNLAQIPIQNMTGLKVLNASY--NSITEIPKNCFPKLYELHTIDVSHNNISSI-FNG-VF 481
Query: 235 DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYI 294
L+ +++S + + + L TL + + +N + ++ SL LTSL +
Sbjct: 482 QTLFSLRSIDLSHNSMREIKSSTF---GTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQL 538
Query: 295 NLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL-KS 353
L N++ K+ F + L E+ S+N L I S T+ + L + LS+N L +
Sbjct: 539 YLNNNQLEKL------FQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDT 592
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ SF L + + L N I +A + L L L++N + + F +
Sbjct: 593 LNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLP-- 650
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
LNL N + ++ + + + + +L+LS+N IQ + N + SLR L L F
Sbjct: 651 -VLFELNLYGNQVKDISKR-AFEGLLQLLTLNLSSNGIQTLQ-NDIFVGLPSLRNLDLSF 707
Query: 474 NEIKHLDATAFGNLD---VLELLSLEHNNIAVVVKRTFIG---MP-NLQIIDLSFNEISM 526
N + LD G LD LE L L HN I+ V K+TF +P NL+ ++LS+N + +
Sbjct: 708 NSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPI 767
Query: 527 LTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQ 570
LT + + + KL L++SHN++ L R V SN T ++ LD+SYN+
Sbjct: 768 LTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNE 812
Score = 309 (113.8 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 144/598 (24%), Positives = 278/598 (46%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL-QGIF--NSKLRELEITGKDLKFI 59
LD+SHN++ L A +++TKL + +L +G F NS L+ L ++ + +
Sbjct: 227 LDISHNQIKKLE-AQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARL 285
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS- 118
D ++F + L L ++ + ++ G F I I T+DL+ N+L +
Sbjct: 286 DANSFRGMRFLRRLFL--SDNVLTDIGRGTFGSIARIG--TIDLARNRLKKIEFQMFTQM 341
Query: 119 NVTKLQHLG----TTILKDREKXXXXXXXXXXRCNKITDLNGNLFRH-LQKSIVKAKKNN 173
N +L L T I K+ K N + + F + + +++ N
Sbjct: 342 NYVELLDLAENNITKIEKNSFKDIYQAIINVSH-NALELIETAAFENCVNITVLDLSHNR 400
Query: 174 NNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNV 233
N + S E N +T+L +++ L+ L+ S+N I E+ N
Sbjct: 401 LANFSRRSFDETTFATYFQLSY--NNLTNLAQIPIQNMTGLKVLNASYNS--ITEIPKNC 456
Query: 234 FDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNY 293
F +L +++S + +S + + + L +L + + +N+++ I++ + L +L
Sbjct: 457 FPKLYELHTIDVSHNNISSI---FNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLE 513
Query: 294 INLEYNK-ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++L +N+ +S + +L L+++ L+NN LE + F LN + S+N L
Sbjct: 514 MDLSHNELVSVVRGSLAKLT---SLRQLYLNNNQLEKL----FQLPISLNELYFSHNRLT 566
Query: 353 SIKTTSFKNLNNMLNIVLSFNQI-KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
+I + ++ +N+++ + LS NQ+ + +F L + +L LQ+N + + + ++
Sbjct: 567 NIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMS 626
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
+ Q L+L NN IT L + + P+ + L+L N+++++ + L L L
Sbjct: 627 TLQY---LHLENNNITTLERSAFGKLPVLFE-LNLYGNQVKDISKRAFEGLLQLLT-LNL 681
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT---FIGMPNLQIIDLSFNEISMLT 528
N I+ L F L L L L N++ + +T + +L+ +DLS N IS +T
Sbjct: 682 SSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVT 741
Query: 529 GEQF----YFSFKLRILNISHNRLRSLPRDV-FSNTIIEKLDISYNQ-DKIRPGRESN 580
+ F Y + LR LN+S+N + L D+ F + +LD+S+NQ + +R G SN
Sbjct: 742 KKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISN 799
Score = 303 (111.7 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 134/541 (24%), Positives = 235/541 (43%)
Query: 39 QGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQ 98
Q I NS L + +T +L + F + TL + Q+E L F + +E
Sbjct: 170 QEIANS-LGIIRVTNGNLSDLPIETFQPLRKLK--TLDLHGNQLENLKRNQFKNLRELE- 225
Query: 99 MTLDLSHNKLSVLNMATLYSNVTKLQ--HLGTTILKDREKXXXXXXXXXXRC----NKIT 152
LD+SHN++ L A +++TKL ++ L + + N+I
Sbjct: 226 -VLDISHNQIKKLE-AQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIA 283
Query: 153 DLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLY 212
L+ N FR + + + + ++N D N++ + +F +
Sbjct: 284 RLDANSFRGM-RFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMN 342
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
++ L L+ N + IE NS D+++ + + +S + E + N+ L+ +
Sbjct: 343 YVELLDLAENNITKIEKNS-FKDIYQAI--INVSHNALELIETAAFENCVNITVLD---L 396
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR--LKEIRLSNNYLELI 330
+N + N S T Y L YN ++ NL I LK + S N + I
Sbjct: 397 SHNRLANFSRRSFDETTFATYFQLSYNNLT----NLAQIPIQNMTGLKVLNASYNSITEI 452
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
+ F L EL+TI +S+N + SI F+ L ++ +I LS N ++ I + F LP L+
Sbjct: 453 PKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLL 512
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
++DL N+L + +TS + L L+NN + L+ Q PI + L S+NR
Sbjct: 513 EMDLSHNELVSVVRGSLAKLTSLR---QLYLNNNQLEKLF-----QLPISLNELYFSHNR 564
Query: 451 IQEVPVNFLQTFADSLRKLYLDFNEIKH-LDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+ +P +SL L L N++ L+ +F L V++ L L++N I+ K
Sbjct: 565 LTNIPSGTWPVM-NSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVA 623
Query: 510 GMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISY 568
M LQ + L N I+ L F L LN+ N+++ + + F + + L++S
Sbjct: 624 VMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSS 683
Query: 569 N 569
N
Sbjct: 684 N 684
Score = 261 (96.9 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 85/358 (23%), Positives = 167/358 (46%)
Query: 214 LQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMD 273
L++L L L + L F + K + L I F + + N+L + +
Sbjct: 125 LEQLHLLRTNLSHVGLLG--FGILGKAKELVIDGHAFQQLPKDLFAGQEIANSLGIIRVT 182
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
N N+ ++ + L L ++L N++ + N F N+ + L+ + +S+N ++ +E+
Sbjct: 183 NGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFK-NL-RELEVLDISHNQIKKLEAQ 240
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQIKYIYPNAFVNLPNLVKL 392
+L +L +S+N L + +F N++L ++ LS NQI + N+F + L +L
Sbjct: 241 HIADLTKLGWCNVSHNALSELSRGTFAR-NSVLKVLHLSHNQIARLDANSFRGMRFLRRL 299
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ 452
L DN L D F +I T ++L+ N + + E Y++ LDL+ N I
Sbjct: 300 FLSDNVLTDIGRGTFGSIARIGT---IDLARNRLKKI-EFQMFTQMNYVELLDLAENNIT 355
Query: 453 EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP 512
++ N + ++ + + N ++ ++ AF N + +L L HN +A +R+F
Sbjct: 356 KIEKNSFKDIYQAI--INVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETT 413
Query: 513 NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
LS+N ++ L L++LN S+N + +P++ F + +D+S+N
Sbjct: 414 FATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHN 471
Score = 251 (93.4 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 137/577 (23%), Positives = 255/577 (44%)
Query: 2 TLDLSHNKLSVLN--MATL--YSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLK 57
T+DL+ N+L + M T Y + L T ++ + + I+ + + ++ L+
Sbjct: 322 TIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAIIN---VSHNALE 378
Query: 58 FIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL 116
I+ +AF+N C ++T L +++ ++ FD E LS+N L+ N+A +
Sbjct: 379 LIETAAFEN---CVNITVLDLSHNRLANFSRRSFD--ETTFATYFQLSYNNLT--NLAQI 431
Query: 117 -YSNVTKLQHLG------TTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
N+T L+ L T I K+ N I+ + +F+ L S+
Sbjct: 432 PIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLF-SLRSI 490
Query: 170 KKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDL-NGNLFRHLYNLQELSLSFNKLQIIE 228
++N+ + S N++ + G+L + L +L++L L+ N+L+
Sbjct: 491 DLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAK-LTSLRQLYLNNNQLE--- 546
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRN-YSLYN 287
+F + + L E+ FS P +N+L +L + +N + + N S
Sbjct: 547 ---KLFQL--PISLNELYFSHNRLTNIPSGTWPV-MNSLIYLDLSHNQLGDTLNGESFTG 600
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
L + + L+ N IS+ + + L+ + L NN + +E F L L + L
Sbjct: 601 LLVVQRLKLQNNGISQPPKDAVA--VMSTLQYLHLENNNITTLERSAFGKLPVLFELNLY 658
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK--DFNLN 405
N +K I +F+ L +L + LS N I+ + + FV LP+L LDL N L D N
Sbjct: 659 GNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTN 718
Query: 406 -VFSNITSKQTPMNLNLSNN---YITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQT 461
V ++ S +T L+LS+N ++T + P +++L+LS N + + + T
Sbjct: 719 GVLDDLLSLET---LDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDI--T 773
Query: 462 FADS-LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI-GMP-NLQIID 518
F L +L + N+I L N L+ L + +N ++ + I +P NL +D
Sbjct: 774 FGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLD 833
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
LS N+I L L+ +++++N L +P +
Sbjct: 834 LSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASI 870
Score = 196 (74.1 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 124/549 (22%), Positives = 233/549 (42%)
Query: 5 LSHNKLSVLNMATL-YSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSA 63
LS+N L+ N+A + N+T L+ L + ++ KL EL I S
Sbjct: 420 LSYNNLT--NLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNIS-SI 476
Query: 64 FDNI-DACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVT 121
F+ + + L ++ +++ + E+ S F + + +M DLSHN+L + +L + +T
Sbjct: 477 FNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEM--DLSHNELVSVVRGSL-AKLT 533
Query: 122 KLQ--HLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQ 179
L+ +L L+ + N++T++ + + S++ ++N D
Sbjct: 534 SLRQLYLNNNQLEKLFQLPISLNELYFSHNRLTNIPSGTWP-VMNSLIYLDLSHNQLGDT 592
Query: 180 VSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFE 238
++ + N I+ + + LQ L L N + +E ++ F
Sbjct: 593 LNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSA-----FG 647
Query: 239 KLQLLEISFSLFNSN--EFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL 296
KL +L +L+ + + L L L + +N I+ ++N L SL ++L
Sbjct: 648 KLPVL-FELNLYGNQVKDISKRAFEGLLQLLT-LNLSSNGIQTLQNDIFVGLPSLRNLDL 705
Query: 297 EYNKISKIHNNLFH-FNIHKRLKEIRLSNNYLELIESDTF-------YNLKELNTITLSY 348
+N ++K+ N + L+ + LS+N + + TF YNL+ LN LSY
Sbjct: 706 SFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLN---LSY 762
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
NL+ + ++ + +S NQI + N +L LD+ N+L NL
Sbjct: 763 NLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELS--NLKSEE 820
Query: 409 NITSKQTPMN-LNLSNNYITNL-YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSL 466
+I ++ L+LS+N I +L + N K + K +DL+NN +++VP + + + +
Sbjct: 821 HIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSL--KYVDLTNNSLEDVPASIVGSMRNGS 878
Query: 467 RKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNL----QIIDLSFN 522
+ L L N + H N L+ L+ +K + G P L Q+I L
Sbjct: 879 QVL-LAGNPL-HCGC----NARPLKYFMLQQTIAGEDLKSIYCGTPALIKDKQLISLDDE 932
Query: 523 EISMLTGEQ 531
+ EQ
Sbjct: 933 YLHCAEDEQ 941
Score = 154 (59.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 92/471 (19%), Positives = 201/471 (42%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS--KLRELEITGKDLKF 58
+ +DLSHN+L ++ + ++ KL L L +QL+ +F L EL + L
Sbjct: 512 LEMDLSHNEL----VSVVRGSLAKLTSLRQLYLNNNQLEKLFQLPISLNELYFSHNRLTN 567
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSG-LFDKIENIEQMTLDLSHNKLSVLNM-ATL 116
I + +++ + L +++ Q+ + +G F + +++ L L +N +S A
Sbjct: 568 IPSGTWPVMNSL--IYLDLSHNQLGDTLNGESFTGLLVVQR--LKLQNNGISQPPKDAVA 623
Query: 117 YSNVTKLQHLGTTILKDREKXXXXXXXXXXRCN----KITDLNGNLFRHLQKSIVKAKKN 172
+ + HL + E+ N ++ D++ F L + ++ +
Sbjct: 624 VMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQ-LLTLNLS 682
Query: 173 NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGN---LFRHLYNLQELSLSFNKLQIIEL 229
+N + +D N +T L+ + L +L+ L LS N++ +
Sbjct: 683 SNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTK 742
Query: 230 NSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLT 289
+ + L ++ S +N Y + L L + +N I ++R + N T
Sbjct: 743 KTFPSHQYIPYNLRNLNLS-YNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFT 801
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
SL +++ YN++S + + F++ + L + LS+N + + +K L + L+ N
Sbjct: 802 SLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNN 861
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L+ + + ++ N ++L+ N + + NA +++ + LK +
Sbjct: 862 SLEDVPASIVGSMRNGSQVLLAGNPL-HCGCNARPLKYFMLQQTIAGEDLKSIYCGTPAL 920
Query: 410 ITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLD---LSNNRIQEVPVN 457
I KQ ++L + Y+ + E++++ +Y K +D L++ R +EV N
Sbjct: 921 IKDKQL---ISLDDEYL-HCAEDEQE---MY-KGIDYEQLTDVRFREVKTN 963
Score = 39 (18.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 448 NNRIQEVPVNFLQTFAD 464
NNR ++PV L T +
Sbjct: 1003 NNRTAQIPVEELSTLGE 1019
>WB|WBGene00002282 [details] [associations]
symbol:let-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0002064
"epithelial cell development" evidence=IMP] [GO:0035150 "regulation
of tube size" evidence=IMP] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0045177 GO:GO:0040011
GO:GO:0040018 GO:GO:0002064 GeneTree:ENSGT00700000104286
GO:GO:0035150 EMBL:Z79598 EMBL:JQ292907 RefSeq:NP_510425.2
ProteinModelPortal:Q93373 SMR:Q93373 STRING:Q93373
EnsemblMetazoa:C44H4.2 GeneID:181554 KEGG:cel:CELE_C44H4.2
CTD:181554 WormBase:C44H4.2 HOGENOM:HOG000018354 OMA:PLVCTEN
Uniprot:Q93373
Length = 773
Score = 334 (122.6 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 103/369 (27%), Positives = 189/369 (51%)
Query: 218 SLSFNKLQIIELNSNVFD-VFEKLQLLEISFSLFNS-NEFPYYILNKNLNTLEWLAMDNN 275
SL+ N+ +++EL N F +F ++ L++S + ++ + +N LE + +++N
Sbjct: 66 SLTMNQAELVELPPNFFSGLF--IRRLDLSQNKIKKIDDAAFAGINP---VLEEVVLNHN 120
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
I+ + +L L +L ++L N I +I N++K L +I L +N + I + TF
Sbjct: 121 LIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNK-LYDINLGSNKIFSIHTSTF 179
Query: 336 YNLKE-LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
N+K + TI L +N + ++ +++ + L + ++ L N+I+ + F+NLP L L+L
Sbjct: 180 QNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNL 239
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
N++ + N F N+ S + L LS N IT L + Q ++ LDL+NN I +
Sbjct: 240 AGNQIHELNRQAFLNVPSLRY---LYLSGNKITKLTAY-QFQTFEQLEMLDLTNNEIGAI 295
Query: 455 PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNL 514
P N L LR+LYL N+I ++ + AF N ++ L+ L N + + G+PNL
Sbjct: 296 PANSLSGLKQ-LRQLYLAHNKISNISSNAFTNSSIVVLV-LSSNELKTLTAGIISGLPNL 353
Query: 515 QIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PRDVFSNTIIEKLDISYNQDKI 573
Q + N+I + FY + L +L+++ N+L + P + + +D+S N+
Sbjct: 354 QQVSFRDNQIKTINRNAFYDAASLVMLDLAKNQLTEIAPTTFLAQLNLLLVDLSENKLPK 413
Query: 574 RPGRESNPR 582
P N R
Sbjct: 414 TPYSAFNSR 422
Score = 314 (115.6 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 101/364 (27%), Positives = 180/364 (49%)
Query: 199 KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYY 258
++ +L N F L+ ++ L LS NK++ I+ ++ + L+ + ++ +L + P
Sbjct: 73 ELVELPPNFFSGLF-IRRLDLSQNKIKKID-DAAFAGINPVLEEVVLNHNLIE--KVPAA 128
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLY-NLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L N L L + NN+I I+ ++ NL L INL NKI IH + F N+ +
Sbjct: 129 ALAGLPNLLR-LDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQ-NVKNSI 186
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQIK 376
+ I L +N + + S LK+L ++ L N ++ + +F NL +LN++ L+ NQI
Sbjct: 187 QTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLP-VLNLLNLAGNQIH 245
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ AF+N+P+L L L NK+ L + T +Q M L+L+NN I + N
Sbjct: 246 ELNRQAFLNVPSLRYLYLSGNKIT--KLTAYQFQTFEQLEM-LDLTNNEIGAIPANSLSG 302
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
++ L L++N+I + N S+ L L NE+K L A L L+ +S
Sbjct: 303 LK-QLRQLYLAHNKISNISSNAFTN--SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFR 359
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N I + + F +L ++DL+ N+++ + F L ++++S N+L P F
Sbjct: 360 DNQIKTINRNAFYDAASLVMLDLAKNQLTEIAPTTFLAQLNLLLVDLSENKLPKTPYSAF 419
Query: 557 SNTI 560
++ +
Sbjct: 420 NSRV 423
Score = 214 (80.4 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 100/417 (23%), Positives = 184/417 (44%)
Query: 32 ILKGDQLQ-GIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLF 90
I++ +Q Q G+ S L + +L + P+ F + + L ++ +I+++ F
Sbjct: 53 IIRTNQAQVGLIQS----LTMNQAELVELPPNFFSGL---FIRRLDLSQNKIKKIDDAAF 105
Query: 91 DKIENIEQMTLDLSHNKLSVLNMATLYS--NVTKLQHLGTTILKDREKXXX----XXXXX 144
I + + + L+HN + + A L N+ +L +I++ +E+
Sbjct: 106 AGINPVLEEVV-LNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDI 164
Query: 145 XXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLN 204
NKI ++ + F++++ SI +NN S + N+I L+
Sbjct: 165 NLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLD 224
Query: 205 GNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNL 264
F +L L L+L+ N QI ELN F L+ L +S + + Y +
Sbjct: 225 ALNFLNLPVLNLLNLAGN--QIHELNRQAFLNVPSLRYLYLSGNKIT--KLTAYQF-QTF 279
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
LE L + NN I I SL L L + L +NKIS I +N F + + + LS+
Sbjct: 280 EQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAF---TNSSIVVLVLSS 336
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N L+ + + L L ++ N +K+I +F + +++ + L+ NQ+ I P F+
Sbjct: 337 NELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAASLVMLDLAKNQLTEIAPTTFL 396
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSN----ITSKQTPM----NLNLSNNYITNLYEND 433
NL+ +DL +NKL + F++ + K+ P+ NL++ T +Y D
Sbjct: 397 AQLNLLLVDLSENKLPKTPYSAFNSRVGTVLLKENPLVCTENLHMLQQG-TGVYVRD 452
Score = 159 (61.0 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 46/154 (29%), Positives = 80/154 (51%)
Query: 420 NLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
N S + I + ++ Q + I+SL ++ + E+P NF +R+L L N+IK +
Sbjct: 44 NSSASGILQIIRTNQAQVGL-IQSLTMNQAELVELPPNFFSGLF--IRRLDLSQNKIKKI 100
Query: 480 DATAFGNLD-VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF-K 537
D AF ++ VLE + L HN I V G+PNL +DLS N I + ++ + + K
Sbjct: 101 DDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNK 160
Query: 538 LRILNISHNRLRSLPRDVFSNT--IIEKLDISYN 569
L +N+ N++ S+ F N I+ +++ +N
Sbjct: 161 LYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHN 194
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 324 (119.1 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 94/303 (31%), Positives = 153/303 (50%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+NL++L++L + + ++++ +L L +L Y++LE N++ + LF L +
Sbjct: 95 QNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHT--PSLASLS 152
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS+N L +E F L L + L +N L + T F+ L N+ +VL+ N++ Y+ P
Sbjct: 153 LSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPA 212
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F L L +LDL N L+ NVF ++ Q L L N IT + +
Sbjct: 213 LFCGLGELRELDLSRNALRSVKANVFVHLPRLQ---KLYLDRNLITAVAPGAFLGMKA-L 268
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+ LDLS+NR+ + + L L L N I L F +L LE L L HN I
Sbjct: 269 RWLDLSHNRVAGLMEDTFPGLL-GLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIR 327
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTII 561
+ +RTF G+ L+++ L+ N+I+ + F F + ++N+S N LRSLP VF +
Sbjct: 328 QLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQG--L 385
Query: 562 EKL 564
+KL
Sbjct: 386 DKL 388
Score = 279 (103.3 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 99/365 (27%), Positives = 177/365 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L LF+ L +L +L+L +N L + L VF L L ++ N+ Y
Sbjct: 156 NLLGRLEEGLFQGLSHLWDLNLGWNSLVV--LPDTVFQGLGNLHELVLA-----GNKLTY 208
Query: 258 Y--ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
L L L L + N +++++ +L L + L+ N I+ + F + K
Sbjct: 209 LQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAF-LGM-K 266
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+ + LS+N + + DTF L L+ + L++N + S++ +FK+L+ + + L N+I
Sbjct: 267 ALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRI 326
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + F L L L L DN++ + + FS + + +NLS N + +L E
Sbjct: 327 RQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAV---MNLSGNCLRSLPER-VF 382
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFA--DSLRKLYLDFNEIKHLDATAFGNLDVLELL 493
Q + SL L ++ + V L TFA LR+L+L N I ++ + L L L
Sbjct: 383 QGLDKLHSLHLEHSCLGHVR---LHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLEL 439
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + ++ F G+ +L+ + LS+N+++ L+ E + L+ISHN L +L
Sbjct: 440 DLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE 499
Query: 554 DVFSN 558
+FS+
Sbjct: 500 GLFSS 504
Score = 259 (96.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 92/376 (24%), Positives = 171/376 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N++ +L LF H +L LSLS N L +E +F L L + ++ + P
Sbjct: 132 NRLRNLAVGLFTHTPSLASLSLSSNLLGRLE--EGLFQGLSHLWDLNLGWN--SLVVLPD 187
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH-KR 316
+ + L L L + N + ++ L L ++L N + + N+F +H R
Sbjct: 188 TVF-QGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVF---VHLPR 243
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+++ L N + + F +K L + LS+N + + +F L + + L+ N I
Sbjct: 244 LQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIA 303
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ P F +L L +L L N+++ F + + L L++N IT +
Sbjct: 304 SLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEV---LTLNDNQITEVRVG-AFS 359
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
+ ++LS N ++ +P Q D L L+L+ + + H+ F L L L L
Sbjct: 360 GLFNVAVMNLSGNCLRSLPERVFQGL-DKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLR 418
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N+I+ + +++ G+ L +DL+ N ++ L + F L L +S+N+L +L +V
Sbjct: 419 DNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVL 478
Query: 557 SNTIIEK---LDISYN 569
+++ LDIS+N
Sbjct: 479 GP--LQRAFWLDISHN 492
Score = 223 (83.6 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 86/312 (27%), Positives = 147/312 (47%)
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
WL D NN+ +I + + NL+SL+++NL+ + + + + + L + L N L
Sbjct: 80 WL--DGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQAL-LGL-QNLYYLHLERNRLR 135
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F + L +++LS NLL ++ F+ L+++ ++ L +N + + F L N
Sbjct: 136 NLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGN 195
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L +L L NKL +F + + L+LS N + ++ N P ++ L L
Sbjct: 196 LHELVLAGNKLTYLQPALFCGLGELR---ELDLSRNALRSVKANVFVHLP-RLQKLYLDR 251
Query: 449 NRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
N I V P FL A LR L L N + L F L L +L L HN IA + RT
Sbjct: 252 NLITAVAPGAFLGMKA--LRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRT 309
Query: 508 FIGMPNLQIIDLSFNEISMLTGEQFYFSF-KLRILNISHNRLRSLPRDVFSNTI-IEKLD 565
F + L+ + L N I L GE+ + +L +L ++ N++ + FS + ++
Sbjct: 310 FKDLHFLEELQLGHNRIRQL-GERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMN 368
Query: 566 ISYNQDKIRPGR 577
+S N + P R
Sbjct: 369 LSGNCLRSLPER 380
Score = 221 (82.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 81/353 (22%), Positives = 165/353 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L +F+ L NL EL L+ NKL ++ +F +L+ L++S + S +
Sbjct: 180 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQ--PALFCGLGELRELDLSRNALRSVKANV 237
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++ +L L+ L +D N I + + + +L +++L +N+++ + + F + L
Sbjct: 238 FV---HLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLG--L 292
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+RL++N + + TF +L L + L +N ++ + +F+ L + + L+ NQI
Sbjct: 293 HVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITE 352
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ AF L N+ ++L N L+ VF + + L+L ++ + ++ +
Sbjct: 353 VRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHS---LHLEHSCLGHVRLHTFAGL 409
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ L L +N I + L ++ L +L L N + HL F L LE L L +
Sbjct: 410 S-GLRRLFLRDNSISSIEEQSLAGLSELL-ELDLTTNRLTHLPRQLFQGLGHLEYLLLSY 467
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
N + + + +D+S N + L F ++R L++ +N L++
Sbjct: 468 NQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSLQT 520
Score = 221 (82.9 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 74/268 (27%), Positives = 125/268 (46%)
Query: 307 NLFHF--NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNN 364
NL H +I + + L N L I S F NL L+ + L + L+S++ + L N
Sbjct: 64 NLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQN 123
Query: 365 MLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+ + L N+++ + F + P+L L L N L +F ++ +LNL N
Sbjct: 124 LYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHL---WDLNLGWN 180
Query: 425 YITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATA 483
+ L + Q + L L+ N++ + P F LR+L L N ++ + A
Sbjct: 181 SLVVLPDT-VFQGLGNLHELVLAGNKLTYLQPALFCGL--GELRELDLSRNALRSVKANV 237
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNI 543
F +L L+ L L+ N I V F+GM L+ +DLS N ++ L + F L +L +
Sbjct: 238 FVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRL 297
Query: 544 SHNRLRSL-PRDVFSNTIIEKLDISYNQ 570
+HN + SL PR +E+L + +N+
Sbjct: 298 AHNAIASLRPRTFKDLHFLEELQLGHNR 325
Score = 167 (63.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 92/407 (22%), Positives = 170/407 (41%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ--HLG---TTILKGDQLQGIFNSKLRELEITGKDL 56
+L LS N L L L+ ++ L +LG +L QG+ N L EL + G L
Sbjct: 150 SLSLSSNLLGRLEEG-LFQGLSHLWDLNLGWNSLVVLPDTVFQGLGN--LHELVLAGNKL 206
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS-VLNMAT 115
++ P+ F + +L L + + + + +F + ++++ LD N ++ V A
Sbjct: 207 TYLQPALFCGLGELRELDL--SRNALRSVKANVFVHLPRLQKLYLD--RNLITAVAPGAF 262
Query: 116 LYSNVTK---LQHLGTT-ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKK 171
L + L H +++D N I L F+ L ++ +
Sbjct: 263 LGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLH--FLEELQ 320
Query: 172 NNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELN 230
+N Q+ +R + N+IT++ F L+N+ ++LS N L+ L
Sbjct: 321 LGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLR--SLP 378
Query: 231 SNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS 290
VF +KL L + S + L+ L L + +N+I +I SL L+
Sbjct: 379 ERVFQGLDKLHSLHLEHSCLGHVRLHTFA---GLSGLRRLFLRDNSISSIEEQSLAGLSE 435
Query: 291 LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNL 350
L ++L N+++ + LF H L+ + LS N L + ++ L+ + +S+N
Sbjct: 436 LLELDLTTNRLTHLPRQLFQGLGH--LEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNH 493
Query: 351 LKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L+++ F +L + + L N ++ P P L +L L N
Sbjct: 494 LETLAEGLFSSLGRVRYLSLRNNSLQTFSPQ-----PGLERLWLDAN 535
Score = 135 (52.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 50/206 (24%), Positives = 93/206 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I L F L L+ L+L+ N QI E+ F + ++ +S + S P
Sbjct: 324 NRIRQLGERTFEGLGQLEVLTLNDN--QITEVRVGAFSGLFNVAVMNLSGNCLRS--LPE 379
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L+ L L ++++ + ++R ++ L+ L + L N IS I + + L
Sbjct: 380 RVF-QGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLA-GLSELL 437
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
E+ L+ N L + F L L + LSYN L ++ L + +S N ++
Sbjct: 438 -ELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLET 496
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ F +L + L L++N L+ F+
Sbjct: 497 LAEGLFSSLGRVRYLSLRNNSLQTFS 522
Score = 54 (24.1 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL 103
S L L + G L+ ++P A + Y L L+ ++ L GLF ++ +L L
Sbjct: 98 SSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLE--RNRLRNLAVGLFTHTPSLA--SLSL 153
Query: 104 SHNKLSVLNMATLYSNVTKLQHL 126
S N L L L+ ++ L L
Sbjct: 154 SSNLLGRLEEG-LFQGLSHLWDL 175
Score = 48 (22.0 bits), Expect = 8.4e-22, Sum P(2) = 8.4e-22
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEEL-PSGLFDKIENIEQMTLDLSH 105
R L + G +L I +AF N+ + D L + + + L P L ++N+ L L
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSL-DF-LNLQGSWLRSLEPQALLG-LQNLYY--LHLER 131
Query: 106 NKLSVLNMAT-LYSNVTKLQHL 126
N+L N+A L+++ L L
Sbjct: 132 NRLR--NLAVGLFTHTPSLASL 151
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 319 (117.4 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 100/345 (28%), Positives = 171/345 (49%)
Query: 219 LSFNKLQIIELNSNVFDVFEKLQLLEISFSL---FNSNEFPYYILN--KNLNTLEWLAMD 273
L +N + + LN+++ ++ E + L IS + NE + +NL +L L++
Sbjct: 51 LPWNAMSLQILNTHITELPED-KFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLA 109
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
NN +KN+ ++ +L + L N++ +I F+ LKE++L N LE I
Sbjct: 110 NNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPA--QFSQFSNLKELQLYGNNLEYIPEG 167
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
F +L L + L N + F++L N+ + L N++ I F L NL +L
Sbjct: 168 VFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELA 227
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE 453
LQ+N++ + +F N + Q L LSNN+I++L Q P ++ L L N ++E
Sbjct: 228 LQENQIGTLSPGLFHNNRNLQ---RLYLSNNHISHLPPGIFMQLP-HLNKLTLFGNSLKE 283
Query: 454 VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
+ + LR+L+L N I L AF +L+ L++L L HN ++ + F G+ N
Sbjct: 284 LSPGVFGPMPN-LRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTN 342
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
L+ + L N + L G F LR +++ +NRLR LP +F+N
Sbjct: 343 LRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFAN 387
Score = 256 (95.2 bits), Expect = 8.2e-19, P = 8.2e-19
Identities = 96/365 (26%), Positives = 164/365 (44%)
Query: 73 LTLKITNTQIEELPSGLFDKIENIEQM-TLDLSHNKLSVLNMATLYSNVTKLQHLG--TT 129
++L+I NT I ELP DK NI + L + N+L+ + M + N+ L+HL
Sbjct: 56 MSLQILNTHITELPE---DKFLNISALIALKMEKNELANI-MPGAFRNLGSLRHLSLANN 111
Query: 130 ILKDRE----KXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREK 185
LK+ + N++ + F Q S +K + NN + + +
Sbjct: 112 KLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFS--QFSNLKELQLYGNNLEYIPEGVF 169
Query: 186 XXXXXXXXXXRCNK-ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLE 244
N T L+ +F+HL NLQ L L N+L I + + FD LQ L
Sbjct: 170 DHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGT--FDALGNLQELA 227
Query: 245 ISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI 304
+ + + + N+NL L + NN+I ++ L LN + L N + ++
Sbjct: 228 LQENQIGTLSPGLFHNNRNLQRLY---LSNNHISHLPPGIFMQLPHLNKLTLFGNSLKEL 284
Query: 305 HNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNN 364
+F L+E+ L NN++ + + F +L +L + LS+N L I +F L N
Sbjct: 285 SPGVF--GPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTN 342
Query: 365 MLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+ + L N ++ + N F +L NL + LQ+N+L+ ++F+N+ T + L NN
Sbjct: 343 LRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMT---IQLQNN 399
Query: 425 YITNL 429
+ NL
Sbjct: 400 NLENL 404
Score = 253 (94.1 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 112/396 (28%), Positives = 179/396 (45%)
Query: 21 NVTKLQHLGTTI--LKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKIT 78
N LQ L T I L D+ I S L L++ +L I P AF N+ + L+L
Sbjct: 54 NAMSLQILNTHITELPEDKFLNI--SALIALKMEKNELANIMPGAFRNLGSLRHLSL--A 109
Query: 79 NTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL--YSNVTKLQHLGTTILKDRE- 135
N +++ LP LF + N+E TL LS+N+L + A +SN+ +LQ G + E
Sbjct: 110 NNKLKNLPVRLFQDVNNLE--TLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEG 167
Query: 136 --KXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXX 193
N T L+ +F+HL V N ++ + +
Sbjct: 168 VFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELA 227
Query: 194 XXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS-FSLF-N 251
N+I L+ LF + NLQ L LS N I L +F +QL ++ +LF N
Sbjct: 228 LQE-NQIGTLSPGLFHNNRNLQRLYLSNN--HISHLPPGIF-----MQLPHLNKLTLFGN 279
Query: 252 S-NEFPYYILNKNLNTLE-WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
S E + N E WL NN+I ++ + + +L L + L +N++S I F
Sbjct: 280 SLKELSPGVFGPMPNLRELWLY--NNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAF 337
Query: 310 HFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV 369
N L+E+ L N L+ ++ + F +L L ++L N L+ + + F N+N ++ I
Sbjct: 338 --NGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQ 395
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNL 404
L N ++ + F +L NL +L L DN + D N+
Sbjct: 396 LQNNNLENLPLGIFDHLGNLCELRLYDNPWRCDSNI 431
Score = 245 (91.3 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 88/359 (24%), Positives = 152/359 (42%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYI 259
IT+L + F ++ L ++L K ++ + F L+ L ++ + + P +
Sbjct: 65 ITELPEDKFLNISAL--IALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKN--LPVRL 120
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
+++N LE L + NN + I+ ++L + L N + I +F + L +
Sbjct: 121 F-QDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVG--LTK 177
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L NN + F +L L + L N L I +F L N+ + L NQI +
Sbjct: 178 LNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLS 237
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
P F N NL +L L +N + +F + L L N + L P
Sbjct: 238 PGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLN---KLTLFGNSLKELSPGVFGPMP- 293
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ L L NN I +P N + + L+ L L N++ ++ AF L L LSL N
Sbjct: 294 NLRELWLYNNHITSLPDNAF-SHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNA 352
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
+ + F + NL+ + L N + L G F L + + +N L +LP +F +
Sbjct: 353 LQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIFDH 411
Score = 244 (91.0 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 87/364 (23%), Positives = 166/364 (45%)
Query: 151 ITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRH 210
IT+L + F ++ +++ K N + + + NK+ +L LF+
Sbjct: 65 ITELPEDKFLNIS-ALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQD 123
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
+ NL+ L LS N Q++++ F F L+ L++ + N P + + +L L L
Sbjct: 124 VNNLETLLLSNN--QLVQIQPAQFSQFSNLKELQLYGN--NLEYIPEGVFD-HLVGLTKL 178
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+ NN ++ +L +L + L N++S I F + L+E+ L N + +
Sbjct: 179 NLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTF--DALGNLQELALQENQIGTL 236
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
F+N + L + LS N + + F L ++ + L N +K + P F +PNL
Sbjct: 237 SPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLR 296
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
+L L +N + N FS++ Q L LS+N ++ + ++ L L N
Sbjct: 297 ELWLYNNHITSLPDNAFSHLNQLQV---LILSHNQLSYISPG-AFNGLTNLRELSLHTNA 352
Query: 451 IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIG 510
+Q++ N ++ A+ LR + L N ++ L + F N++ L + L++NN+ + F
Sbjct: 353 LQDLDGNVFRSLAN-LRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIFDH 411
Query: 511 MPNL 514
+ NL
Sbjct: 412 LGNL 415
Score = 222 (83.2 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 94/371 (25%), Positives = 168/371 (45%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L+I + + F NI A + LK+ ++ + G F + ++ L L++NKL
Sbjct: 58 LQILNTHITELPEDKFLNISAL--IALKMEKNELANIMPGAFRNLGSLRH--LSLANNKL 113
Query: 109 SVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCN-KITDLNGNLFRHLQKSI- 166
L + L+ +V L+ T +L + + N K L GN ++ + +
Sbjct: 114 KNLPVR-LFQDVNNLE---TLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVF 169
Query: 167 ---VKAKKNN--NNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLS 220
V K N NN +S R + N+++D+ F L NLQEL+L
Sbjct: 170 DHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQ 229
Query: 221 FNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
N QI L+ +F LQ L +S + + + P I + L L L + N++K +
Sbjct: 230 EN--QIGTLSPGLFHNNRNLQRLYLSNN--HISHLPPGIFMQ-LPHLNKLTLFGNSLKEL 284
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLF-HFNIHKRLKEIRLSNNYLELIESDTFYNLK 339
+ +L + L N I+ + +N F H N +L+ + LS+N L I F L
Sbjct: 285 SPGVFGPMPNLRELWLYNNHITSLPDNAFSHLN---QLQVLILSHNQLSYISPGAFNGLT 341
Query: 340 ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
L ++L N L+ + F++L N+ N+ L N+++ + + F N+ L+ + LQ+N L
Sbjct: 342 NLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNL 401
Query: 400 KDFNLNVFSNI 410
++ L +F ++
Sbjct: 402 ENLPLGIFDHL 412
Score = 130 (50.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 443 SLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
SL + N I E+P + FL A L L ++ NE+ ++ AF NL L LSL +N +
Sbjct: 57 SLQILNTHITELPEDKFLNISA--LIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLK 114
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI- 560
+ R F + NL+ + LS N++ + QF L+ L + N L +P VF + +
Sbjct: 115 NLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVG 174
Query: 561 IEKLDISYN 569
+ KL++ N
Sbjct: 175 LTKLNLGNN 183
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 319 (117.4 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 93/303 (30%), Positives = 153/303 (50%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+NL++L++L + + ++++ +L L +L +++LE N++ + LF L +
Sbjct: 94 QNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVGLFTHT--PSLASLS 151
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS+N L +E F L L + L +N L + T F+ L N+ +VL+ N++ Y+ P
Sbjct: 152 LSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPA 211
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F L L +LDL N L+ NVF ++ Q L L N IT + +
Sbjct: 212 LFCGLGELRELDLSRNALRSVKANVFVHLPRLQ---KLYLDRNLITAVAPRAFLGMKA-L 267
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+ LDLS+NR+ + + L L L N I L F +L LE L L HN I
Sbjct: 268 RWLDLSHNRVAGLMEDTFPGLL-GLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIR 326
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTII 561
+ +RTF G+ L+++ L+ N+I+ + F F + ++N+S N LRSLP VF +
Sbjct: 327 QLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQG--L 384
Query: 562 EKL 564
+KL
Sbjct: 385 DKL 387
Score = 279 (103.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 99/365 (27%), Positives = 177/365 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L LF+ L +L +L+L +N L + L VF L L ++ N+ Y
Sbjct: 155 NLLGRLEEGLFQGLSHLWDLNLGWNSLVV--LPDTVFQGLGNLHELVLA-----GNKLTY 207
Query: 258 Y--ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
L L L L + N +++++ +L L + L+ N I+ + F + K
Sbjct: 208 LQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAF-LGM-K 265
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+ + LS+N + + DTF L L+ + L++N + S++ +FK+L+ + + L N+I
Sbjct: 266 ALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRI 325
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + F L L L L DN++ + + FS + + +NLS N + +L E
Sbjct: 326 RQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAV---MNLSGNCLRSLPER-VF 381
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFA--DSLRKLYLDFNEIKHLDATAFGNLDVLELL 493
Q + SL L ++ + V L TFA LR+L+L N I ++ + L L L
Sbjct: 382 QGLDKLHSLHLEHSCLGHVR---LHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLEL 438
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + ++ F G+ +L+ + LS+N+++ L+ E + L+ISHN L +L
Sbjct: 439 DLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE 498
Query: 554 DVFSN 558
+FS+
Sbjct: 499 GLFSS 503
Score = 258 (95.9 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 92/376 (24%), Positives = 171/376 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N++ +L LF H +L LSLS N L +E +F L L + ++ + P
Sbjct: 131 NRLRNLAVGLFTHTPSLASLSLSSNLLGRLE--EGLFQGLSHLWDLNLGWN--SLVVLPD 186
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH-KR 316
+ + L L L + N + ++ L L ++L N + + N+F +H R
Sbjct: 187 TVF-QGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVF---VHLPR 242
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+++ L N + + F +K L + LS+N + + +F L + + L+ N I
Sbjct: 243 LQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIA 302
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ P F +L L +L L N+++ F + + L L++N IT +
Sbjct: 303 SLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEV---LTLNDNQITEVRVG-AFS 358
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
+ ++LS N ++ +P Q D L L+L+ + + H+ F L L L L
Sbjct: 359 GLFNVAVMNLSGNCLRSLPERVFQGL-DKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLR 417
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N+I+ + +++ G+ L +DL+ N ++ L + F L L +S+N+L +L +V
Sbjct: 418 DNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVL 477
Query: 557 SNTIIEK---LDISYN 569
+++ LDIS+N
Sbjct: 478 GP--LQRAFWLDISHN 491
Score = 231 (86.4 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 75/268 (27%), Positives = 127/268 (47%)
Query: 307 NLFHF--NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNN 364
NL H +I + + L N L I S F NL L+ + L + L+S++ + L N
Sbjct: 63 NLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQN 122
Query: 365 MLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+ ++ L N+++ + F + P+L L L N L +F ++ +LNL N
Sbjct: 123 LYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHL---WDLNLGWN 179
Query: 425 YITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATA 483
+ L + Q + L L+ N++ + P F LR+L L N ++ + A
Sbjct: 180 SLVVLPDT-VFQGLGNLHELVLAGNKLTYLQPALFCGL--GELRELDLSRNALRSVKANV 236
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNI 543
F +L L+ L L+ N I V R F+GM L+ +DLS N ++ L + F L +L +
Sbjct: 237 FVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRL 296
Query: 544 SHNRLRSL-PRDVFSNTIIEKLDISYNQ 570
+HN + SL PR +E+L + +N+
Sbjct: 297 AHNAIASLRPRTFKDLHFLEELQLGHNR 324
Score = 225 (84.3 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 82/353 (23%), Positives = 165/353 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L +F+ L NL EL L+ NKL ++ +F +L+ L++S + S +
Sbjct: 179 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQ--PALFCGLGELRELDLSRNALRSVKANV 236
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++ +L L+ L +D N I + + + +L +++L +N+++ + + F + L
Sbjct: 237 FV---HLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLG--L 291
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+RL++N + + TF +L L + L +N ++ + +F+ L + + L+ NQI
Sbjct: 292 HVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITE 351
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ AF L N+ ++L N L+ VF + + L+L ++ + ++ +
Sbjct: 352 VRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHS---LHLEHSCLGHVRLHTFAGL 408
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ L L +N I + L ++ L +L L N + HL F L LE L L +
Sbjct: 409 S-GLRRLFLRDNSISSIEEQSLAGLSELL-ELDLTTNRLTHLPRQLFQGLGHLEYLLLSY 466
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
N + + + +D+S N + L F +LR L++ +N L++
Sbjct: 467 NQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQT 519
Score = 225 (84.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 86/312 (27%), Positives = 147/312 (47%)
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
WL D NN+ +I + + NL+SL+++NL+ + + + + + L + L N L
Sbjct: 79 WL--DGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQAL-LGL-QNLYHLHLERNRLR 134
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F + L +++LS NLL ++ F+ L+++ ++ L +N + + F L N
Sbjct: 135 NLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGN 194
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L +L L NKL +F + + L+LS N + ++ N P ++ L L
Sbjct: 195 LHELVLAGNKLTYLQPALFCGLGELR---ELDLSRNALRSVKANVFVHLP-RLQKLYLDR 250
Query: 449 NRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
N I V P FL A LR L L N + L F L L +L L HN IA + RT
Sbjct: 251 NLITAVAPRAFLGMKA--LRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRT 308
Query: 508 FIGMPNLQIIDLSFNEISMLTGEQFYFSF-KLRILNISHNRLRSLPRDVFSNTI-IEKLD 565
F + L+ + L N I L GE+ + +L +L ++ N++ + FS + ++
Sbjct: 309 FKDLHFLEELQLGHNRIRQL-GERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMN 367
Query: 566 ISYNQDKIRPGR 577
+S N + P R
Sbjct: 368 LSGNCLRSLPER 379
Score = 170 (64.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 92/407 (22%), Positives = 170/407 (41%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ--HLG---TTILKGDQLQGIFNSKLRELEITGKDL 56
+L LS N L L L+ ++ L +LG +L QG+ N L EL + G L
Sbjct: 149 SLSLSSNLLGRLEEG-LFQGLSHLWDLNLGWNSLVVLPDTVFQGLGN--LHELVLAGNKL 205
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS-VLNMAT 115
++ P+ F + +L L + + + + +F + ++++ LD N ++ V A
Sbjct: 206 TYLQPALFCGLGELRELDL--SRNALRSVKANVFVHLPRLQKLYLD--RNLITAVAPRAF 261
Query: 116 LYSNVTK---LQHLGTT-ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKK 171
L + L H +++D N I L F+ L ++ +
Sbjct: 262 LGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLH--FLEELQ 319
Query: 172 NNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELN 230
+N Q+ +R + N+IT++ F L+N+ ++LS N L+ L
Sbjct: 320 LGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLR--SLP 377
Query: 231 SNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS 290
VF +KL L + S + L+ L L + +N+I +I SL L+
Sbjct: 378 ERVFQGLDKLHSLHLEHSCLGHVRLHTFA---GLSGLRRLFLRDNSISSIEEQSLAGLSE 434
Query: 291 LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNL 350
L ++L N+++ + LF H L+ + LS N L + ++ L+ + +S+N
Sbjct: 435 LLELDLTTNRLTHLPRQLFQGLGH--LEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNH 492
Query: 351 LKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L+++ F +L + + L N ++ P P L +L L N
Sbjct: 493 LETLAEGLFSSLGRLRYLSLRNNSLQTFSPQ-----PGLERLWLDAN 534
Score = 138 (53.6 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 51/206 (24%), Positives = 93/206 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I L F L L+ L+L+ N QI E+ F + ++ +S + S P
Sbjct: 323 NRIRQLGERTFEGLGQLEVLTLNDN--QITEVRVGAFSGLFNVAVMNLSGNCLRS--LPE 378
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L+ L L ++++ + ++R ++ L+ L + L N IS I + + L
Sbjct: 379 RVF-QGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLA-GLSELL 436
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
E+ L+ N L + F L L + LSYN L ++ L + +S N ++
Sbjct: 437 -ELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLET 495
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ F +L L L L++N L+ F+
Sbjct: 496 LAEGLFSSLGRLRYLSLRNNSLQTFS 521
Score = 56 (24.8 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL 103
S L L + G L+ ++P A + Y L L+ ++ L GLF ++ +L L
Sbjct: 97 SSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLE--RNRLRNLAVGLFTHTPSLA--SLSL 152
Query: 104 SHNKLSVLNMATLYSNVTKLQHL 126
S N L L L+ ++ L L
Sbjct: 153 SSNLLGRLEEG-LFQGLSHLWDL 174
Score = 49 (22.3 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEEL-PSGLFDKIENIEQMTLDLSH 105
R L + G +L I +AF N+ + D L + + + L P L ++N+ L L
Sbjct: 76 RALWLDGNNLSSIPSAAFQNLSSL-DF-LNLQGSWLRSLEPQALLG-LQNLYH--LHLER 130
Query: 106 NKLSVLNMAT-LYSNVTKLQHL 126
N+L N+A L+++ L L
Sbjct: 131 NRLR--NLAVGLFTHTPSLASL 150
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 322 (118.4 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 146/574 (25%), Positives = 245/574 (42%)
Query: 19 YSNVTKLQHLGTTILKGDQLQGIF---NSKLRELEITGKDLKFIDPSAFDNIDACYDLTL 75
+ + +QH+ + L+ IF NS L +++ L + P F + L
Sbjct: 517 FHTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWL 576
Query: 76 KITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTT------ 129
K + Q+ + F + + L LS NK+ + T + N+ LQ L +
Sbjct: 577 K--DNQLTRVERSFFADTPQLGR--LYLSDNKIRDIEKDT-FVNLLLLQFLDLSGNQLRQ 631
Query: 130 ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDR-EKXXX 188
+ +D N I + G F L K++ ++N D
Sbjct: 632 LRRDYFAPLQDLEELSLARNHIEAIEGYAFAKL-KNLKSLDLSHNPLVQLTRDIFSNEFP 690
Query: 189 XXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS 248
C+ + L + F+ L NL EL+L N+L ++ + +L L +FS
Sbjct: 691 LNSLNLGNCS-LRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDIPNLRRLLLSHNNFS 749
Query: 249 LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNL 308
S +L++ L +L+ L+M N ++ I + T+L ++L N++++I+ N+
Sbjct: 750 YAGSVGIMAGMLDR-LRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLTQINRNI 808
Query: 309 FH-FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLN 367
F N+ KE+RL N L YNL L ++ L+ N L SI N+
Sbjct: 809 FSGLNV---FKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQ 865
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT 427
++L N+I + VNL L +DL N L N + + Q ++LSNN
Sbjct: 866 LILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQ---KVHLSNNRFL 922
Query: 428 NLYENDKKQAPI-YIKSLDLSNNRIQEVPVNFLQTFADS----LRKLYLDFNEIKHLDAT 482
+ + I + L+L+ N P+N + T + L++LY+ + L +
Sbjct: 923 QIPSSALSDVSIPRLSWLNLTGN-----PINRIYTVKEERYPYLKELYICQTNLSILTSK 977
Query: 483 AFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILN 542
F L+ L L +N I + F + NL +DLS NE+ ML E+ LR LN
Sbjct: 978 DFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLN 1037
Query: 543 ISHNRLRSLPRDVFSNTIIEK--LDISYNQ-DKI 573
ISHN L+ L + FS ++E LD+S+NQ D+I
Sbjct: 1038 ISHNTLKDL--EEFSVDLLEMQTLDLSFNQLDRI 1069
Score = 314 (115.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 140/581 (24%), Positives = 254/581 (43%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L SH+ L L +L + + L+ L K Q+ S +++L T D + +
Sbjct: 127 LQFSHSHLEALKDNSLRNVRSSLESLSIVNGKLTQMPSRALSSMQKL--TALDFDYNEIV 184
Query: 63 AFDNIDACYDLTLKITN---TQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
D+ + Y L + N +++ +P F +E Q +D+S N L + L
Sbjct: 185 RVDDY-SFYGLRISKLNMKGNRLQGMPEHAFAGLEECMQ-EIDVSENGLRTFPLMAL--- 239
Query: 120 VTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQ 179
KL HL L + + N + + S++ ++N +
Sbjct: 240 -RKLDHLRILRLSNN-RIPTFYGDIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEI 297
Query: 180 VSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK--------------LQ 225
D + N+I + F+ L L L +S N+ LQ
Sbjct: 298 GPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQ 357
Query: 226 IIELNSN----VFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
++L+ N + VF L QL E+ S N E P + N ++ + +++N I +I
Sbjct: 358 TVDLSHNHIHTIGGVFSNLPQLREVFLSENNILELPADAFTNSTN-VDVIYLESNAIAHI 416
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE 340
L +L+++ L N I + LF + +L + L NN ++ +E F L+
Sbjct: 417 DPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKST--KLTSLSLDNNEIQDLEIGMFRKLEH 474
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
L + L N ++ ++ F+ L ++ + + N I+ I P AF L N+ ++LQDN+L
Sbjct: 475 LREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLT 534
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITNLYEND-KKQAPIYIKSLDLSNNRIQEVPVNFL 459
++F + S +++ L NY+ ++ +Q + I + L +N++ V +F
Sbjct: 535 VLE-DIFPDENSSL--LSVQLEANYLHKVHPRTFSRQQKVQI--MWLKDNQLTRVERSF- 588
Query: 460 QTFADS--LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
FAD+ L +LYL N+I+ ++ F NL +L+ L L N + + + F + +L+ +
Sbjct: 589 --FADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEEL 646
Query: 518 DLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
L+ N I + G F L+ L++SHN L L RD+FSN
Sbjct: 647 SLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSN 687
Score = 269 (99.8 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 135/526 (25%), Positives = 232/526 (44%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L+ L+++G L+ + F + +L+L IE + F K++N++ +LDLSH
Sbjct: 619 LQFLDLSGNQLRQLRRDYFAPLQDLEELSL--ARNHIEAIEGYAFAKLKNLK--SLDLSH 674
Query: 106 NKLSVLNMATLYSNVTKLQ--HLGTTILKDREKXXXXXXXXXXRCN-KITDLNGNLFRHL 162
N L L ++SN L +LG L+ E+ N + LN + L
Sbjct: 675 NPLVQLTR-DIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTL 733
Query: 163 QKSIVKAKKNNNNNEDQVS---------DREKXXXXXXXXXXRCNKITDLNGNLFRHLYN 213
++ ++NN DR + +I DL LF N
Sbjct: 734 DIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDL---LFAKNTN 790
Query: 214 LQELSLSFNKLQIIELNSNVF---DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L L L N+L ++N N+F +VF++L+L S +FP+ L NL+TLE L
Sbjct: 791 LVRLDLCDNRLT--QINRNIFSGLNVFKELRLCRNELS-----DFPHIALY-NLSTLESL 842
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+ N + +I + L +L + L NKI+ + + N+ +L + LS N L +
Sbjct: 843 DLARNQLASIDFFKLSGTLNLRQLILRDNKITAL-SGFNAVNL-TQLDSVDLSGNLLLSL 900
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN--NMLNIVLSFNQIKYIYPNAFVNLPN 388
++ + L + LS N I +++ +++ + + L+ N I IY P
Sbjct: 901 PANFLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPY 960
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L +L + L F + Q +L+L NN IT + K + +LDLS
Sbjct: 961 LKELYICQTNLSILTSKDFEAFQALQ---HLHLVNNRITRISPGAFKSLTNLL-TLDLSV 1016
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL--LSLEHNNIAVVVKR 506
N ++ +P LQ LR L + N +K L+ F ++D+LE+ L L N + + K+
Sbjct: 1017 NELEMLPKERLQGLR-LLRFLNISHNTLKDLEE--F-SVDLLEMQTLDLSFNQLDRISKK 1072
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
TF + L + L N +++L+ + F F KL +L++ N +P
Sbjct: 1073 TFRNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKNYFELVP 1118
Score = 261 (96.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 124/582 (21%), Positives = 262/582 (45%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS--KLRELEITGKDLKF 58
M+LD+SHN++ L+ N +LQ + + + G+F++ +LRE+ ++ ++
Sbjct: 333 MSLDMSHNRIIGLDPKVFEKN-KRLQTVDLSHNHIHTIGGVFSNLPQLREVFLSENNILE 391
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
+ AF N D+ + + + I + +F + N++ L L N + +L + TL+
Sbjct: 392 LPADAFTN-STNVDV-IYLESNAIAHIDPNVFSTLVNLDH--LYLRSNFIPLLPV-TLFD 446
Query: 119 NVTKLQHLG--TTILKDRE----KXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKN 172
TKL L ++D E + N+I + +F L S+ +
Sbjct: 447 KSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLP-SLQELHIQ 505
Query: 173 NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232
N+ ED + N++T L ++F N LS+ + +++
Sbjct: 506 KNSIEDIEPQAFHTLENMQHINLQDNQLTVLE-DIFPD-ENSSLLSVQLEANYLHKVHPR 563
Query: 233 VFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN 292
F +K+Q++ + + E ++ L L + +N I++I + NL L
Sbjct: 564 TFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLY---LSDNKIRDIEKDTFVNLLLLQ 620
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
+++L N++ ++ + +F + L+E+ L+ N++E IE F LK L ++ LS+N L
Sbjct: 621 FLDLSGNQLRQLRRD--YFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLV 678
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS--NI 410
+ F N + ++ L ++ + +AF +L NL +L+L+ N+L ++ N+
Sbjct: 679 QLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDIPNL 738
Query: 411 TSKQTPMNLNLSNNYITNLYEN--DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
N N S + D+ ++ ++ L +SN + ++P + L +L +
Sbjct: 739 RRLLLSHN-NFSYAGSVGIMAGMLDRLRS---LQQLSMSNCSLGQIP-DLLFAKNTNLVR 793
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT 528
L L N + ++ F L+V + L L N ++ + L+ +DL+ N+++ +
Sbjct: 794 LDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASID 853
Query: 529 GEQFYFSFKLRILNISHNRLRSLPR-DVFSNTIIEKLDISYN 569
+ + LR L + N++ +L + + T ++ +D+S N
Sbjct: 854 FFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGN 895
Score = 251 (93.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 105/380 (27%), Positives = 184/380 (48%)
Query: 209 RHLYNLQELSLSFNKLQI----IELNSN----VFDVFEKLQLLEISFSLFNSNEF----P 256
R L +L+ L LS N++ I+L +N QL + F +SN+F P
Sbjct: 240 RKLDHLRILRLSNNRIPTFYGDIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGP 299
Query: 257 -YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L TL + A N I+ ++ + +L L +++ +N+I + +F N K
Sbjct: 300 DCFRAFPQLKTLSFYA---NQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKN--K 354
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
RL+ + LS+N++ I F NL +L + LS N + + +F N N+ I L N I
Sbjct: 355 RLQTVDLSHNHIHTI-GGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAI 413
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+I PN F L NL L L+ N + + +F T K T +L+L NN I +L E
Sbjct: 414 AHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKST-KLT--SLSLDNNEIQDL-EIGMF 469
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+ +++ + L NNRI+ V + SL++L++ N I+ ++ AF L+ ++ ++L
Sbjct: 470 RKLEHLREVRLHNNRIRRVRRGVFEPLP-SLQELHIQKNSIEDIEPQAFHTLENMQHINL 528
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
+ N + V+ +L + L N + + F K++I+ + N+L + R
Sbjct: 529 QDNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSF 588
Query: 556 FSNTI-IEKLDISYNQDKIR 574
F++T + +L +S N KIR
Sbjct: 589 FADTPQLGRLYLSDN--KIR 606
Score = 244 (91.0 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 138/594 (23%), Positives = 260/594 (43%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS------KLRELEITGK 54
+++ L N L ++ T +S K+Q + LK +QL + S +L L ++
Sbjct: 548 LSVQLEANYLHKVHPRT-FSRQQKVQIMW---LKDNQLTRVERSFFADTPQLGRLYLSDN 603
Query: 55 DLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL------ 108
++ I+ F N+ L L + Q+ +L F ++++E+++L +H +
Sbjct: 604 KIRDIEKDTFVNLLLLQFLDL--SGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAF 661
Query: 109 -SVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQK-SI 166
+ N+ +L + L L I + C+ + L + F+ L +
Sbjct: 662 AKLKNLKSLDLSHNPLVQLTRDIFSNE---FPLNSLNLGNCS-LRKLEQHAFKSLTNLNE 717
Query: 167 VKAKKNNNNNED-QVSD--REKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
+ ++N N D Q D + + + G L R L +LQ+LS+S
Sbjct: 718 LNLERNQLNPADIQTLDIPNLRRLLLSHNNFSYAGSVGIMAGMLDR-LRSLQQLSMSNCS 776
Query: 224 L-QIIEL----NSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIK 278
L QI +L N+N+ +L L + + N N F LN + L + N +
Sbjct: 777 LGQIPDLLFAKNTNLV----RLDLCDNRLTQINRNIF------SGLNVFKELRLCRNELS 826
Query: 279 NIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
+ + +LYNL++L ++L N+++ I + F + L+++ L +N + + NL
Sbjct: 827 DFPHIALYNLSTLESLDLARNQLASI--DFFKLSGTLNLRQLILRDNKITALSGFNAVNL 884
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF--VNLPNLVKLDLQD 396
+L+++ LS NLL S+ ++ N+ + LS N+ I +A V++P L L+L
Sbjct: 885 TQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTG 944
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYI--TNLYENDKKQAPIY--IKSLDLSNNRIQ 452
N + N + ++ P L YI TNL K + ++ L L NNRI
Sbjct: 945 NPI-----NRIYTVKEERYPY---LKELYICQTNLSILTSKDFEAFQALQHLHLVNNRIT 996
Query: 453 EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP 512
+ ++ + L L L NE++ L L +L L++ HN + + + + + +
Sbjct: 997 RISPGAFKSLTNLLT-LDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFS-VDLL 1054
Query: 513 NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDI 566
+Q +DLSFN++ ++ + F L L + NR+ L D F + KL +
Sbjct: 1055 EMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSNDAFR--FLRKLHV 1106
Score = 164 (62.8 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 62/284 (21%), Positives = 136/284 (47%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE-LNTITLSY 348
SL+ + + ++ + ++F +H ++ ++ S+++LE ++ ++ N++ L ++++
Sbjct: 100 SLSIYDFD-RSVTSLSQDVFQPGVH--IRHLQFSHSHLEALKDNSLRNVRSSLESLSIVN 156
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
L + + + ++ + + +N+I + +F L + KL+++ N+L+ + F+
Sbjct: 157 GKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYGL-RISKLNMKGNRLQGMPEHAFA 215
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
+ ++ +++S N + ++ +++ L LSNNRI P TF ++
Sbjct: 216 GL--EECMQEIDVSENGLRTFPLMALRKLD-HLRILRLSNNRI---P-----TFYGDIQ- 263
Query: 469 LYLDFNEIKHLDATAFG--NLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISM 526
L N A A G L L L L N A + F P L+ + N+I +
Sbjct: 264 --LATNNASAA-AAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIEL 320
Query: 527 LTGEQFYFSFKLRILNISHNRLRSLPRDVFS-NTIIEKLDISYN 569
+ E F +L L++SHNR+ L VF N ++ +D+S+N
Sbjct: 321 VQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHN 364
Score = 164 (62.8 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 77/289 (26%), Positives = 125/289 (43%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
R NKIT L+G +L L + LS N L + L +N LQ + +S + F +
Sbjct: 869 RDNKITALSGFNAVNLTQLDSVDLSGNLL--LSLPANFLRHSINLQKVHLSNNRFL--QI 924
Query: 256 PYYILNK-NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
P L+ ++ L WL + N I I L + + +S + + F
Sbjct: 925 PSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSK--DFEAF 982
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
+ L+ + L NN + I F +L L T+ LS N L+ + + L + + +S N
Sbjct: 983 QALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNT 1042
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
+K + + V+L + LDL N+L + F N+ + L L N +T L ND
Sbjct: 1043 LKDLEEFS-VDLLEMQTLDLSFNQLDRISKKTFRNLHGL---LELFLMGNRMTVL-SNDA 1097
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
+ + LDL N + VP+ L+ +LR L L+ N + H A
Sbjct: 1098 FRFLRKLHVLDLRKNYFELVPLEPLRPLETNLRTLRLEENPL-HCSCDA 1145
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 311 (114.5 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 91/297 (30%), Positives = 147/297 (49%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+NL++L++L + + ++++ +L L +L +++LE N + + LF L +
Sbjct: 95 QNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHT--PSLASLS 152
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L NN L +E F L L + L +N L + T F+ L N+ +VL+ N++ Y+ P
Sbjct: 153 LGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPA 212
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
L L +LDL N L+ NVF ++ Q L L N IT + +
Sbjct: 213 LLCGLGELRELDLSRNALRSVKANVFIHLPRLQ---KLYLDRNLITAVAPRAFLGMKA-L 268
Query: 442 KSLDLSNNRIQEVPVNFLQTFAD--SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ LDLS+NR+ + TF L L L N I L F +L LE L L HN
Sbjct: 269 RWLDLSHNRVAGL---LEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNR 325
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
I + ++TF G+ L+++ L+ N+I + F+ F + ++N+S N LRSLP VF
Sbjct: 326 IRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVF 382
Score = 265 (98.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 97/365 (26%), Positives = 176/365 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L LFR L +L +L+L +N L + L VF L L ++ N+ Y
Sbjct: 156 NLLGRLEEGLFRGLSHLWDLNLGWNSLVV--LPDTVFQGLGNLHELVLA-----GNKLTY 208
Query: 258 Y--ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
L L L L + N +++++ +L L + L+ N I+ + F + K
Sbjct: 209 LQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAF-LGM-K 266
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+ + LS+N + + DTF L L+ + L++N + S++ +FK+L+ + + L N+I
Sbjct: 267 ALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRI 326
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + F L L L L DN++ + + F + + +NLS N + +L E+
Sbjct: 327 RQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAV---MNLSGNCLRSLPEH-VF 382
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFA--DSLRKLYLDFNEIKHLDATAFGNLDVLELL 493
Q + SL L ++ + + L TFA LR+L+L N I ++ + L L L
Sbjct: 383 QGLGRLHSLHLEHSCLGRIR---LHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLEL 439
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + ++ F G+ L+ + LS N+++ML+ + + L++SHNRL +
Sbjct: 440 DLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAE 499
Query: 554 DVFSN 558
+FS+
Sbjct: 500 GLFSS 504
Score = 229 (85.7 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 108/486 (22%), Positives = 210/486 (43%)
Query: 72 DLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT--T 129
+L++ ++ + +LP G+ + L L N LS + A + N++ L L +
Sbjct: 55 ELSVFCSSRNLTQLPDGI-----PVSTRALWLDGNNLSSIPSAA-FQNLSSLDFLNLQGS 108
Query: 130 ILKDREKXXXXXXXXXXRC----NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREK 185
L+ E N + L LFRH S+ NN +
Sbjct: 109 WLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTP-SLASLSLGNNLLGRLEEGLFR 167
Query: 186 XXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
N + L +F+ L NL EL L+ NKL ++ + +L+ L++
Sbjct: 168 GLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQ--PALLCGLGELRELDL 225
Query: 246 SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
S + S + +I +L L+ L +D N I + + + +L +++L +N+++ +
Sbjct: 226 SRNALRSVKANVFI---HLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLL 282
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM 365
+ F + L +RL++N + + TF +L L + L +N ++ + +F+ L +
Sbjct: 283 EDTFPGLLG--LHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQL 340
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
+ L+ NQI + AF L N+ ++L N L+ +VF + + L+L ++
Sbjct: 341 EVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHS---LHLEHSC 397
Query: 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG 485
+ + + ++ L L +N I + L ++ L +L L N++ HL F
Sbjct: 398 LGRIRLHTFAGLS-GLRRLFLRDNSISSIEEQSLAGLSELL-ELDLTANQLTHLPRQLFQ 455
Query: 486 NLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF-KLRILNIS 544
L LE L L +N + ++ + + +DLS N + E + S +LR LN+
Sbjct: 456 GLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLET-PAEGLFSSLGRLRYLNLR 514
Query: 545 HNRLRS 550
+N L++
Sbjct: 515 NNSLQT 520
Score = 221 (82.9 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 70/250 (28%), Positives = 120/250 (48%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N L I S F NL L+ + L + L+S++ + L N+ ++ L N ++ +
Sbjct: 81 LDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAG 140
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F + P+L L L +N L +F ++ +LNL N + L + Q +
Sbjct: 141 LFRHTPSLASLSLGNNLLGRLEEGLFRGLSHL---WDLNLGWNSLVVLPDT-VFQGLGNL 196
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
L L+ N++ + L + LR+L L N ++ + A F +L L+ L L+ N I
Sbjct: 197 HELVLAGNKLTYLQPALLCGLGE-LRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLIT 255
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PRDVFSNTI 560
V R F+GM L+ +DLS N ++ L + F L +L ++HN + SL PR
Sbjct: 256 AVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHF 315
Query: 561 IEKLDISYNQ 570
+E+L + +N+
Sbjct: 316 LEELQLGHNR 325
Score = 159 (61.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 92/407 (22%), Positives = 171/407 (42%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ--HLG---TTILKGDQLQGIFNSKLRELEITGKDL 56
+L L +N L L L+ ++ L +LG +L QG+ N L EL + G L
Sbjct: 150 SLSLGNNLLGRLEEG-LFRGLSHLWDLNLGWNSLVVLPDTVFQGLGN--LHELVLAGNKL 206
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS-VLNMAT 115
++ P+ + +L L + + + + +F + ++++ LD N ++ V A
Sbjct: 207 TYLQPALLCGLGELRELDL--SRNALRSVKANVFIHLPRLQKLYLD--RNLITAVAPRAF 262
Query: 116 LYSNVTK---LQHLGTT-ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKK 171
L + L H +L+D N IT L F+ L ++ +
Sbjct: 263 LGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLH--FLEELQ 320
Query: 172 NNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELN 230
+N Q+ ++ + N+I ++ F L+N+ ++LS N L+ L
Sbjct: 321 LGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLR--SLP 378
Query: 231 SNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS 290
+VF +L L + S + L+ L L + +N+I +I SL L+
Sbjct: 379 EHVFQGLGRLHSLHLEHSCLGRIRLHTFA---GLSGLRRLFLRDNSISSIEEQSLAGLSE 435
Query: 291 LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNL 350
L ++L N+++ + LF + + L+ + LSNN L ++ D L+ + LS+N
Sbjct: 436 LLELDLTANQLTHLPRQLFQ-GLGQ-LEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNR 493
Query: 351 LKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L++ F +L + + L N ++ FV P L +L L N
Sbjct: 494 LETPAEGLFSSLGRLRYLNLRNNSLQ-----TFVPQPGLERLWLDAN 535
Score = 52 (23.4 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 22/83 (26%), Positives = 37/83 (44%)
Query: 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL 103
S L L + G L+ ++P A + Y L L+ + L +GLF ++ +L L
Sbjct: 98 SSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLE--RNLLRSLAAGLFRHTPSLA--SLSL 153
Query: 104 SHNKLSVLNMATLYSNVTKLQHL 126
+N L L L+ ++ L L
Sbjct: 154 GNNLLGRLEEG-LFRGLSHLWDL 175
Score = 46 (21.3 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 25/88 (28%), Positives = 39/88 (44%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEEL-PSGLFDKIENIEQMTLDLSH 105
R L + G +L I +AF N+ + D L + + + L P L ++N+ L L
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSL-DF-LNLQGSWLRSLEPQALLG-LQNLYH--LHLER 131
Query: 106 NKLSVLNMATLYSNVTKLQHL--GTTIL 131
N L L A L+ + L L G +L
Sbjct: 132 NLLRSL-AAGLFRHTPSLASLSLGNNLL 158
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 310 (114.2 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 103/342 (30%), Positives = 162/342 (47%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
+SL I ELN + F L L I + S P +NL +L +L++ NN
Sbjct: 56 MSLQILNTHITELNESPFLNISALIALRIEKNEL-SRITPGAF--RNLGSLRYLSLANNK 112
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
++ + L SL + L N++ +I HF+ LKE++L N+LE I F
Sbjct: 113 LQVLPIGLFQGLDSLESLLLSSNQLLQIQPA--HFSQCSNLKELQLHGNHLEYIPDGAFD 170
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
+L L + L N L I F++L N+ + L N++ I F L NL +L LQ
Sbjct: 171 HLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQ 230
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
N++ + +F N + Q L LSNN+I+ L + Q P + L L N ++E+
Sbjct: 231 NQIGLLSPGLFHNNHNLQ---RLYLSNNHISQLPPSVFMQLP-QLNRLTLFGNSLKELSP 286
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
+ LR+L+L N I L F NL L++L L N I+ + F G+ L+
Sbjct: 287 GIFGPMPN-LRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRE 345
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
+ L N + L G F L+ +++ +NRLR LP ++F+N
Sbjct: 346 LSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFAN 387
Score = 248 (92.4 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 93/371 (25%), Positives = 175/371 (47%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L+I + ++ S F NI A + L+I ++ + G F + ++ L L++NKL
Sbjct: 58 LQILNTHITELNESPFLNISAL--IALRIEKNELSRITPGAFRNLGSLRY--LSLANNKL 113
Query: 109 SVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDL--NGNLFRHLQKS- 165
VL + L+ + L+ L L + +C+ + +L +GN ++
Sbjct: 114 QVLPIG-LFQGLDSLESL----LLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGA 168
Query: 166 ---IVKAKKNN--NNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSL 219
+V K N N+ +S R + N++TD+ F L NLQEL+L
Sbjct: 169 FDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELAL 228
Query: 220 SFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKN 279
N++ + L+ +F LQ L +S + + ++ P + + L L L + N++K
Sbjct: 229 QQNQIGL--LSPGLFHNNHNLQRLYLSNN--HISQLPPSVFMQ-LPQLNRLTLFGNSLKE 283
Query: 280 IRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLK 339
+ + +L + L N IS + +N+F N+ ++L+ + LS N + I F L
Sbjct: 284 LSPGIFGPMPNLRELWLYDNHISSLPDNVFS-NL-RQLQVLILSRNQISFISPGAFNGLT 341
Query: 340 ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
EL ++L N L+ + F+ L N+ NI L N+++ + N F N+ L+ + LQ+N+L
Sbjct: 342 ELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQL 401
Query: 400 KDFNLNVFSNI 410
++ L +F ++
Sbjct: 402 ENLPLGIFDHL 412
Score = 241 (89.9 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 92/359 (25%), Positives = 151/359 (42%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYI 259
IT+LN + F ++ L ++L K ++ + F L+ L ++ + P +
Sbjct: 65 ITELNESPFLNISAL--IALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQV--LPIGL 120
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
+ L++LE L + +N + I+ ++L + L N + I + F + L +
Sbjct: 121 F-QGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVG--LTK 177
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N L I F +L L + L N L I +F L N+ + L NQI +
Sbjct: 178 LNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLS 237
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
P F N NL +L L +N + +VF + L L N + L P
Sbjct: 238 PGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLN---RLTLFGNSLKELSPGIFGPMP- 293
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ L L +N I +P N L+ L L N+I + AF L L LSL N
Sbjct: 294 NLRELWLYDNHISSLPDNVFSNLRQ-LQVLILSRNQISFISPGAFNGLTELRELSLHTNA 352
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
+ + F + NLQ I L N + L G F L + + +N+L +LP +F +
Sbjct: 353 LQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDH 411
Score = 241 (89.9 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 109/386 (28%), Positives = 176/386 (45%)
Query: 21 NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNT 80
N LQ L T I + ++ + S L L I +L I P AF N+ + L+L N
Sbjct: 54 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSL--ANN 111
Query: 81 QIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMA--TLYSNVTKLQHLGTTI--LKDRE- 135
+++ LP GLF ++++E + L S N+L + A + SN+ +LQ G + + D
Sbjct: 112 KLQVLPIGLFQGLDSLESLLL--SSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAF 169
Query: 136 KXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXX 195
N +T ++ +F+HL V N + + +
Sbjct: 170 DHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQ 229
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS-FSLF-NS- 252
+ N+I L+ LF + +NLQ L LS N I +L +VF +QL +++ +LF NS
Sbjct: 230 Q-NQIGLLSPGLFHNNHNLQRLYLSNN--HISQLPPSVF-----MQLPQLNRLTLFGNSL 281
Query: 253 NEFPYYILNKNLNTLE-WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
E I N E WL +N+I ++ + NL L + L N+IS I F
Sbjct: 282 KELSPGIFGPMPNLRELWLY--DNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAF-- 337
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N L+E+ L N L+ ++ + F L L I+L N L+ + F N+N ++ I L
Sbjct: 338 NGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQ 397
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDN 397
NQ++ + F +L L +L L DN
Sbjct: 398 NNQLENLPLGIFDHLGKLCELRLYDN 423
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 45/194 (23%), Positives = 90/194 (46%)
Query: 386 LP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
LP N + L + + + + N + F NI++ + L + N ++ + + ++ L
Sbjct: 51 LPWNAMSLQILNTHITELNESPFLNISAL---IALRIEKNELSRITPGAFRNLGS-LRYL 106
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
L+NN++Q +P+ Q DSL L L N++ + F L+ L L N++ +
Sbjct: 107 SLANNKLQVLPIGLFQGL-DSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIP 165
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEK 563
F + L ++L N ++ ++ F L++L + NRL +P F + +++
Sbjct: 166 DGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQE 225
Query: 564 LDISYNQ-DKIRPG 576
L + NQ + PG
Sbjct: 226 LALQQNQIGLLSPG 239
Score = 147 (56.8 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 53/208 (25%), Positives = 105/208 (50%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N +++ + I + + F+N+ L+ L ++ N+L F N+ S + L+L+N
Sbjct: 54 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRY---LSLAN 110
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDAT 482
N + L Q ++SL LS+N++ ++ P +F Q +L++L L N ++++
Sbjct: 111 NKLQVL-PIGLFQGLDSLESLLLSSNQLLQIQPAHFSQ--CSNLKELQLHGNHLEYIPDG 167
Query: 483 AFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILN 542
AF +L L L+L N++ + R F + NLQ++ L N ++ + F L+ L
Sbjct: 168 AFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELA 227
Query: 543 ISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ N++ L +F N +++L +S N
Sbjct: 228 LQQNQIGLLSPGLFHNNHNLQRLYLSNN 255
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 310 (114.2 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 104/362 (28%), Positives = 176/362 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + + LF L NL L+L +N L + L VF L+ L ++ N+ PY
Sbjct: 151 NLFSKVEEGLFAGLSNLWYLNLGWNSLVV--LPDKVFHDLPNLRELILA-----GNKLPY 203
Query: 258 --YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L +L L+ L + N +K I+ L L + L N+I+ I F + K
Sbjct: 204 LQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAF-MGM-K 261
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+ + LS+N L + DTF L L+ + LS N + S++ +FK+L + + L N+I
Sbjct: 262 SLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRI 321
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ F L L L L +N+L+D F + + ++LS N I L E
Sbjct: 322 WSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAV---MHLSANCIKTLPEY-VF 377
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+ + SL L ++ + ++ N + SLR+L+L N I ++ +F L L L L
Sbjct: 378 EGVTKLHSLHLEHSCLSKIRANTFSSLT-SLRRLFLQHNAISTIEDQSFRELHELLELDL 436
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
+HN ++ + + F+G+ NL+ + LSFN+I ++ F +L L++SHN+L +L V
Sbjct: 437 KHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAV 496
Query: 556 FS 557
+
Sbjct: 497 IT 498
Score = 302 (111.4 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 104/377 (27%), Positives = 173/377 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N T L FR+L L L L ++L +E + F L L + N Y
Sbjct: 79 NNFTQLPAAAFRNLSGLDFLDLQSSQLAAVE--QHAFHGLRSLYHLHLE-----RNRLKY 131
Query: 258 YILNKNLNT--LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L+T L L+++NN + L++L Y+NL +N + + + +FH ++
Sbjct: 132 LAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFH-DL-P 189
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+E+ L+ N L ++ F +L EL + LS N LK IK F L + + L+ NQI
Sbjct: 190 NLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQI 249
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
I P AF+ + +L LDL N+L + F + S L LS N IT+L K
Sbjct: 250 NAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHV---LRLSTNSITSLRPRTFK 306
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+++ L L +NRI + L L L+ N+++ + A AF L + ++ L
Sbjct: 307 DLQ-FLEELQLGHNRIWSLAERTFDGLGQ-LEVLSLNNNQLQDIKAGAFLGLYNVAVMHL 364
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
N I + + F G+ L + L + +S + F LR L + HN + ++
Sbjct: 365 SANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQS 424
Query: 556 FS--NTIIEKLDISYNQ 570
F + ++E LD+ +N+
Sbjct: 425 FRELHELLE-LDLKHNR 440
Score = 295 (108.9 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 98/350 (28%), Positives = 170/350 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ L LF L L+EL LS N L+ I++N +F +KLQ L ++ + N+ P
Sbjct: 199 NKLPYLQHQLFCSLTELKELDLSGNALKGIKIN--IFVKLQKLQKLYLNNNQINAIA-PR 255
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + +L WL + +N + ++ + L SL+ + L N I+ + F ++ + L
Sbjct: 256 AFMG--MKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFK-DL-QFL 311
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+E++L +N + + TF L +L ++L+ N L+ IK +F L N+ + LS N IK
Sbjct: 312 EELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKT 371
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ F + L L L+ + L N FS++TS + L L +N I+ + + ++
Sbjct: 372 LPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLR---RLFLQHNAISTIEDQSFREL 428
Query: 438 PIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
++ LDL +NR+ + P F+ +L L+L FN+I + F L L L L
Sbjct: 429 HELLE-LDLKHNRLSHLSPQLFVGL--SNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLS 485
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
HN +A + + NL+ + L N + + SF L L + N
Sbjct: 486 HNQLATLDNAVITQLANLRYLSLRNNSLETFSVGFLCPSFTLEQLWLGGN 535
Score = 279 (103.3 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 99/402 (24%), Positives = 181/402 (45%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N++ L + F H Q ++V NNN N + L +F
Sbjct: 127 NRLKYLAPHTFLHTQ-NLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVF 185
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
L NL+EL L+ NKL ++ +F +L+ L++S + + ++ L L+
Sbjct: 186 HDLPNLRELILAGNKLPYLQ--HQLFCSLTELKELDLSGNALKGIKINIFV---KLQKLQ 240
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L ++NN I I + + SL +++L +N+++ ++ + F + L +RLS N +
Sbjct: 241 KLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLS--LHVLRLSTNSIT 298
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ TF +L+ L + L +N + S+ +F L + + L+ NQ++ I AF+ L N
Sbjct: 299 SLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYN 358
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
+ + L N +K VF +T + L+L ++ ++ + N ++ L L +
Sbjct: 359 VAVMHLSANCIKTLPEYVFEGVTKLHS---LHLEHSCLSKIRANTFSSLTS-LRRLFLQH 414
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
N I + + + L +L L N + HL F L LE L L N I + + TF
Sbjct: 415 NAISTIEDQSFRELHELL-ELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTF 473
Query: 509 IGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
+ L +DLS N+++ L LR L++ +N L +
Sbjct: 474 SPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNSLET 515
Score = 265 (98.3 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 121/475 (25%), Positives = 216/475 (45%)
Query: 16 ATLYSNVTKLQHLGTTILKGDQLQGI----FNS--KLRELEITGKDLKFIDPSAFDNIDA 69
A + N++ L L L+ QL + F+ L L + LK++ P F +
Sbjct: 86 AAAFRNLSGLDFLD---LQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQN 142
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTT 129
L+L N ++ GLF + N+ L+L N L VL ++ ++ L+ L
Sbjct: 143 LVSLSLN--NNLFSKVEEGLFAGLSNL--WYLNLGWNSLVVLP-DKVFHDLPNLREL--- 194
Query: 130 ILKDREKXXXXXXXXXXRCN-KITDLNGNLFRHLQKSI-VKAKKN-----NNNNEDQVSD 182
IL + K DL+GN + ++ +I VK +K NNN + ++
Sbjct: 195 ILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAP 254
Query: 183 RE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQ 241
R N++T L + F L +L L LS N I L F + L+
Sbjct: 255 RAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNS--ITSLRPRTFKDLQFLE 312
Query: 242 LLEISFS-LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
L++ + +++ E + L LE L+++NN +++I+ + L ++ ++L N
Sbjct: 313 ELQLGHNRIWSLAERTF----DGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANC 368
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
I + +F + K L + L ++ L I ++TF +L L + L +N + +I+ SF+
Sbjct: 369 IKTLPEYVFE-GVTK-LHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFR 426
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
L+ +L + L N++ ++ P FV L NL L L N++ D + N FS + + L+
Sbjct: 427 ELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPL---RRLFWLD 483
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFL-QTFADSLRKLYLDFN 474
LS+N + L +N ++ L L NN ++ V FL +F +L +L+L N
Sbjct: 484 LSHNQLATL-DNAVITQLANLRYLSLRNNSLETFSVGFLCPSF--TLEQLWLGGN 535
Score = 252 (93.8 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 81/310 (26%), Positives = 149/310 (48%)
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
WL D NN + + NL+ L++++L+ ++++ + + FH + + L + L N L+
Sbjct: 75 WL--DGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQHAFH-GL-RSLYHLHLERNRLK 130
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ TF + + L +++L+ NL ++ F L+N+ + L +N + + F +LPN
Sbjct: 131 YLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPN 190
Query: 389 LVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
L +L L NKL +F ++T K+ ++ N N++ +K +Y L+
Sbjct: 191 LRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLY-----LN 245
Query: 448 NNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
NN+I + P F+ SLR L L N + L F L L +L L N+I + R
Sbjct: 246 NNQINAIAPRAFMGM--KSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPR 303
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLD 565
TF + L+ + L N I L F +L +L++++N+L+ + F + +
Sbjct: 304 TFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMH 363
Query: 566 ISYNQDKIRP 575
+S N K P
Sbjct: 364 LSANCIKTLP 373
Score = 244 (91.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 68/254 (26%), Positives = 125/254 (49%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
K I L N + + F NL L+ + L + L +++ +F L ++ ++ L N++KY
Sbjct: 72 KAIWLDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKY 131
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ P+ F++ NLV L L +N +F+ +++ LNL N + L +
Sbjct: 132 LAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNL---WYLNLGWNSLVVLPDKVFHDL 188
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P ++ L L+ N++ + + + L++L L N +K + F L L+ L L +
Sbjct: 189 P-NLRELILAGNKLPYLQHQLFCSLTE-LKELDLSGNALKGIKINIFVKLQKLQKLYLNN 246
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PRDVF 556
N I + R F+GM +L+ +DLS N ++ L + F L +L +S N + SL PR
Sbjct: 247 NQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFK 306
Query: 557 SNTIIEKLDISYNQ 570
+E+L + +N+
Sbjct: 307 DLQFLEELQLGHNR 320
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 54/208 (25%), Positives = 91/208 (43%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N I L N + AF NL L LDLQ ++L + F + S +L+L
Sbjct: 70 NAKAIWLDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQHAFHGLRSLY---HLHLER 126
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N + L + + SL L+NN +V ++ L L L +N + L
Sbjct: 127 NRLKYLAPHTFLHTQNLV-SLSLNNNLFSKVEEGLFAGLSN-LWYLNLGWNSLVVLPDKV 184
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNI 543
F +L L L L N + + + F + L+ +DLS N + + F KL+ L +
Sbjct: 185 FHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYL 244
Query: 544 SHNRLRSL-PRDVFSNTIIEKLDISYNQ 570
++N++ ++ PR + LD+S+N+
Sbjct: 245 NNNQINAIAPRAFMGMKSLRWLDLSHNR 272
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 306 (112.8 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 96/344 (27%), Positives = 163/344 (47%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
ELS+ + + +L + D L L +FS + F +NL++L +L + +
Sbjct: 55 ELSVFCSSRNLTQLPDGIPDAARALWLDSNNFSSVPAGAF------RNLSSLGFLNLQGS 108
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR-LKEIRLSNNYLELIESDT 334
+ ++ +L L +L +++LE N++ + + F +H L + L NN L +E
Sbjct: 109 GLASLEPQALLGLQNLYHLHLERNQLRSLAAHTF---LHTPGLASLGLHNNLLSRVEEGL 165
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F L L + L +N L + T+F L N+ +VL+ N++ Y+ P F L L +LDL
Sbjct: 166 FQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDL 225
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
N L+ NVF + Q L L +N + + ++ LDLS+NR+ +
Sbjct: 226 SRNALRSVKANVFVKLPKLQ---KLYLDHNLLAAVAPGAFLGMKA-LRWLDLSHNRVGGL 281
Query: 455 PVNFLQTFAD--SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP 512
TF L L L N + L F +L LE L L HN + + ++ F G+
Sbjct: 282 ---LEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLG 338
Query: 513 NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
L+++ L+ N+I + F F + ++N+S N LR+LP VF
Sbjct: 339 QLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVF 382
Score = 275 (101.9 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 99/365 (27%), Positives = 179/365 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ + LF+ L NL +L+L +N L + L F L+ L ++ N+ Y
Sbjct: 156 NLLSRVEEGLFQGLTNLWDLNLGWNSLAV--LPDTAFHGLANLRELVLA-----GNKLTY 208
Query: 258 Y--ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
L L L L + N +++++ L L + L++N ++ + F + K
Sbjct: 209 LQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAF-LGM-K 266
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+ + LS+N + + DTF L L+ + L++N L S++ +FK+L+ + + L N++
Sbjct: 267 ALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRL 326
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + AF L L L L DN++++ F + + +NLS N + NL E +
Sbjct: 327 RQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAV---MNLSGNCLRNLPEQVFR 383
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFA--DSLRKLYLDFNEIKHLDATA-FGNLDVLEL 492
+ SL L ++ + V L TFA LR+L+L N ++ +D + +G ++LEL
Sbjct: 384 GLG-KLHSLHLEHSCLGRVG---LHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLEL 439
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L N + + R F G+ L+ + LS N +S L + + L++SHNRL++LP
Sbjct: 440 -DLTANRLTHLPGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALP 498
Query: 553 RDVFS 557
V +
Sbjct: 499 EAVLA 503
Score = 235 (87.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 71/250 (28%), Positives = 121/250 (48%)
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
SNN+ + + F NL L + L + L S++ + L N+ ++ L NQ++ + +
Sbjct: 83 SNNFSS-VPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHT 141
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F++ P L L L +N L +F +T+ +LNL N + L + ++
Sbjct: 142 FLHTPGLASLGLHNNLLSRVEEGLFQGLTNL---WDLNLGWNSLAVLPDT-AFHGLANLR 197
Query: 443 SLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
L L+ N++ + P F LR+L L N ++ + A F L L+ L L+HN +A
Sbjct: 198 ELVLAGNKLTYLQPALFCGL--GELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLA 255
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PRDVFSNTI 560
V F+GM L+ +DLS N + L + F L +L ++HN L SL PR
Sbjct: 256 AVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHF 315
Query: 561 IEKLDISYNQ 570
+E+L + +N+
Sbjct: 316 LEELQLGHNR 325
Score = 229 (85.7 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 89/382 (23%), Positives = 167/382 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISF-SLFNSNEFP 256
N++ L + F H L L L N L +E +F L L + + SL +
Sbjct: 132 NQLRSLAAHTFLHTPGLASLGLHNNLLSRVE--EGLFQGLTNLWDLNLGWNSLAVLPDTA 189
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
++ L L L + N + ++ L L ++L N + + N+F + K
Sbjct: 190 FH----GLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVF-VKLPK- 243
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+++ L +N L + F +K L + LS+N + + +F L + + L+ N +
Sbjct: 244 LQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALA 303
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ P F +L L +L L N+L+ F + + L L++N I + +
Sbjct: 304 SLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEV---LALNDNQIQEI-KAGAFL 359
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
+ ++LS N ++ +P + L L+L+ + + + F L L L L+
Sbjct: 360 GLFNVAVMNLSGNCLRNLPEQVFRGLG-KLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLK 418
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + + +++ G+ L +DL+ N ++ L G F KL L +S NRL +LP D
Sbjct: 419 DNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYLLLSRNRLSALPADAL 478
Query: 557 SNTIIEK---LDISYNQDKIRP 575
+++ LD+S+N+ + P
Sbjct: 479 GP--LQRTFWLDVSHNRLQALP 498
Score = 224 (83.9 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 86/353 (24%), Positives = 163/353 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L F L NL+EL L+ NKL ++ +F +L+ L++S + S +
Sbjct: 180 NSLAVLPDTAFHGLANLRELVLAGNKLTYLQ--PALFCGLGELRELDLSRNALRSVKANV 237
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++ L L+ L +D+N + + + + +L +++L +N++ + + F + L
Sbjct: 238 FV---KLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLG--L 292
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+RL++N L + TF +L L + L +N L+ + +F+ L + + L+ NQI+
Sbjct: 293 HVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQE 352
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF+ L N+ ++L N L++ VF + K ++L S L+
Sbjct: 353 IKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGL-GKLHSLHLEHSCLGRVGLHTFAGLSG 411
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ L L +N ++ + L A+ L +L L N + HL F L LE L L
Sbjct: 412 ---LRRLFLKDNGLEAIDEQSLWGLAELL-ELDLTANRLTHLPGRLFQGLGKLEYLLLSR 467
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
N ++ + + +D+S N + L +LR L++ +N LR+
Sbjct: 468 NRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRYLSLRNNSLRT 520
Score = 166 (63.5 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 88/391 (22%), Positives = 165/391 (42%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ--HLG---TTILKGDQLQGIFNSKLRELEITGKDL 56
+L L +N LS + L+ +T L +LG +L G+ N LREL + G L
Sbjct: 150 SLGLHNNLLSRVEEG-LFQGLTNLWDLNLGWNSLAVLPDTAFHGLAN--LRELVLAGNKL 206
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS-VLNMAT 115
++ P+ F + +L L + + + + +F K+ ++++ LD HN L+ V A
Sbjct: 207 TYLQPALFCGLGELRELDL--SRNALRSVKANVFVKLPKLQKLYLD--HNLLAAVAPGAF 262
Query: 116 LYSNVTK---LQH--LGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAK 170
L + L H +G +L+D N + L F+ L ++
Sbjct: 263 LGMKALRWLDLSHNRVGG-LLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLH--FLEEL 319
Query: 171 KNNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIEL 229
+ +N Q+ ++ + N+I ++ F L+N+ ++LS N L+ L
Sbjct: 320 QLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLR--NL 377
Query: 230 NSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLT 289
VF KL L + S + L+ L L + +N ++ I SL+ L
Sbjct: 378 PEQVFRGLGKLHSLHLEHSCLGRVGLHTFA---GLSGLRRLFLKDNGLEAIDEQSLWGLA 434
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
L ++L N+++ + LF + K L+ + LS N L + +D L+ + +S+N
Sbjct: 435 ELLELDLTANRLTHLPGRLFQ-GLGK-LEYLLLSRNRLSALPADALGPLQRTFWLDVSHN 492
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L+++ L + + L N ++ P
Sbjct: 493 RLQALPEAVLAPLGQLRYLSLRNNSLRTFVP 523
Score = 163 (62.4 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 75/320 (23%), Positives = 144/320 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS---NE 254
N + + N+F L LQ+L L N L + F + L+ L++S + +
Sbjct: 228 NALRSVKANVFVKLPKLQKLYLDHNLLAAVA--PGAFLGMKALRWLDLSHNRVGGLLEDT 285
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
FP L L L + +N + ++R + +L L + L +N++ ++ F +
Sbjct: 286 FP------GLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFE-GLG 338
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
+ L+ + L++N ++ I++ F L + + LS N L+++ F+ L + ++ L +
Sbjct: 339 Q-LEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSC 397
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
+ + + F L L +L L+DN L+ + + + L+L+ N +T+L
Sbjct: 398 LGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAEL---LELDLTANRLTHL-PGRL 453
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--NEIKHLDATAFGNLDVLEL 492
Q ++ L LS NR+ +P + L R +LD N ++ L L L
Sbjct: 454 FQGLGKLEYLLLSRNRLSALPADALGPLQ---RTFWLDVSHNRLQALPEAVLAPLGQLRY 510
Query: 493 LSLEHNNIAVVVKRTFIGMP 512
LSL +N++ RTF+ P
Sbjct: 511 LSLRNNSL-----RTFVPQP 525
Score = 48 (22.0 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 22/83 (26%), Positives = 35/83 (42%)
Query: 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL 103
S L L + G L ++P A + Y L L+ Q+ L + F + +L L
Sbjct: 98 SSLGFLNLQGSGLASLEPQALLGLQNLYHLHLE--RNQLRSLAAHTFLHTPGLA--SLGL 153
Query: 104 SHNKLSVLNMATLYSNVTKLQHL 126
+N LS + L+ +T L L
Sbjct: 154 HNNLLSRVEEG-LFQGLTNLWDL 175
>UNIPROTKB|E2RIV9 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0050729 "positive regulation of inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0032735 "positive regulation
of interleukin-12 production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0034346 "positive regulation of
type III interferon production" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027173
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0005737 GO:GO:0006952 GO:GO:0043123
GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032722 GO:GO:0032755
GO:GO:0009615 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098 KO:K05401
PANTHER:PTHR24365:SF5 OMA:IANINDD GO:GO:0045356 GO:GO:0034346
EMBL:AAEX03010493 RefSeq:XP_540020.2 ProteinModelPortal:E2RIV9
Ensembl:ENSCAFT00000011868 GeneID:482905 KEGG:cfa:482905
Uniprot:E2RIV9
Length = 905
Score = 308 (113.5 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 152/584 (26%), Positives = 259/584 (44%)
Query: 9 KLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNID 68
KL +L + L N +L HL DQ +F L EL + +K I + F ++
Sbjct: 98 KLPLLEILNLQHN--ELSHLS------DQTF-VFCVNLTELHLMSNSIKIIQNNPFRSLK 148
Query: 69 ACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT 128
L L +L S L ++EN++++ L S+NK++VL +L LG
Sbjct: 149 NLVKLDLSHNGLSSTKLGSQL--QLENLQELLL--SNNKINVLRRE-------ELDFLGN 197
Query: 129 TILKDREKXXXXXXXXXXRC-NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXX 187
+ L+ E C + I L G ++Q + N + + +
Sbjct: 198 SSLEKLELSSNPIKEFSPGCFHAIGKLFGLSLNNVQ---LNPSLTENLCLELSNTSIQNL 254
Query: 188 XXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISF 247
R + +T L +H NL L LS N L +IE NS V+ + LLE +
Sbjct: 255 SLSNTQLHRTSNMTFLG---LKHT-NLTMLDLSHNNLNVIENNSFVWLPHLEYFLLEYNN 310
Query: 248 --SLFNSNEFPYYILN-KNLNTLEWLAMDNNNIKN---IRNYSLYNLTSLNYINLEYNKI 301
LF S+ F Y +LN + L+ A + ++ + I ++S L L Y+N+E N
Sbjct: 311 IEHLF-SHSF-YGLLNVRYLDLKRSFAKQSTSLASHPRIDDFSFQWLKCLQYLNMEDNYF 368
Query: 302 SKIHNNLFHFNIHKRLKEIRLSNNY--LELIESDTFYNLKE--LNTITLSYNLLKSIKTT 357
+ I +N+F I +LK + LSN++ L+ + ++TF +L + L T+ L+ N + I++
Sbjct: 369 AGIKSNMFTGLI--KLKHLSLSNSFTSLQTLTNETFLSLAQSPLITLNLTKNKISKIESG 426
Query: 358 SFKNLNNMLNIVLSFNQI-KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTP 416
+F L ++ + L N+I + + + L N+V++ L NK + F+ I S +
Sbjct: 427 AFSWLGHLQVLDLGLNEIGQELTGQEWRGLENIVEIYLSYNKYLQLTSSSFALIPSLR-- 484
Query: 417 MNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
L L + N+ + P+ + LDLSNN I + L+ + L L + N
Sbjct: 485 -RLMLRRTALRNVDSSPSPFHPLRNLNILDLSNNNIANINDELLEGL-EKLEILDMQHNN 542
Query: 476 IKHL--DATAFG------NLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+ L A G L L +L+LE N + F G+ L+ IDL N +++
Sbjct: 543 LARLWKHANPGGPVHFLKGLSHLHILNLESNGFDEIPAEVFKGLSELKSIDLGLNNLNIF 602
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI--IEKLDISYN 569
F L+ LN+ N + S+ ++VF + LD+S+N
Sbjct: 603 PSSLFNDQVSLKSLNLQKNLITSVEKNVFGPAFRNLSNLDMSFN 646
Score = 240 (89.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 125/502 (24%), Positives = 208/502 (41%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATLYS----NVTKLQHLGTT 129
L +T+ Q+ LP F + Q+T LD N +S L + LQH +
Sbjct: 57 LNLTHNQLRRLPPANFTRYS---QLTILDGGFNSISKLEPELCQKLPLLEILNLQHNELS 113
Query: 130 ILKDREKXX-XXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXX 188
L D+ N I + N FR L K++VK ++N +
Sbjct: 114 HLSDQTFVFCVNLTELHLMSNSIKIIQNNPFRSL-KNLVKLDLSHNGLSSTKLGSQLQLE 172
Query: 189 XXXXXXXRCNKITDLNGNLFRHLYN--LQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS 246
NKI L L N L++L LS N ++ E + F KL L ++
Sbjct: 173 NLQELLLSNNKINVLRREELDFLGNSSLEKLELSSNPIK--EFSPGCFHAIGKLFGLSLN 230
Query: 247 FSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL--TSLNYINLEYNKISKI 304
N + L + +++ L++ N + N + L T+L ++L +N ++ I
Sbjct: 231 NVQLNPSLTENLCLELSNTSIQNLSLSNTQLHRTSNMTFLGLKHTNLTMLDLSHNNLNVI 290
Query: 305 HNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS---------IK 355
NN F + H L+ L N +E + S +FY L + + L + K I
Sbjct: 291 ENNSFVWLPH--LEYFLLEYNNIEHLFSHSFYGLLNVRYLDLKRSFAKQSTSLASHPRID 348
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN--KLKDFNLNVFSNITSK 413
SF+ L + + + N I N F L L L L ++ L+ F ++
Sbjct: 349 DFSFQWLKCLQYLNMEDNYFAGIKSNMFTGLIKLKHLSLSNSFTSLQTLTNETFLSLA-- 406
Query: 414 QTPM-NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI-QEVPVNFLQTFADSLRKLYL 471
Q+P+ LNL+ N I+ + E+ +++ LDL N I QE+ + +++ ++YL
Sbjct: 407 QSPLITLNLTKNKISKI-ESGAFSWLGHLQVLDLGLNEIGQELTGQEWRGL-ENIVEIYL 464
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT--FIGMPNLQIIDLSFNEISMLTG 529
+N+ L +++F + L L L + V F + NL I+DLS N I+ +
Sbjct: 465 SYNKYLQLTSSSFALIPSLRRLMLRRTALRNVDSSPSPFHPLRNLNILDLSNNNIANIND 524
Query: 530 EQFYFSFKLRILNISHNRLRSL 551
E KL IL++ HN L L
Sbjct: 525 ELLEGLEKLEILDMQHNNLARL 546
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 149/592 (25%), Positives = 246/592 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHL-----GTTILKGDQLQGIFNSKLRELEITGKDLK 57
LDLSHN LS + + + LQ L +L+ ++L + NS L +LE++ +K
Sbjct: 153 LDLSHNGLSSTKLGSQLQ-LENLQELLLSNNKINVLRREELDFLGNSSLEKLELSSNPIK 211
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIE-ELPSGLFDKIENIEQMTLDLSHNKLS-VLNMAT 115
P F I + L+L N Q+ L L ++ N L LS+ +L NM
Sbjct: 212 EFSPGCFHAIGKLFGLSLN--NVQLNPSLTENLCLELSNTSIQNLSLSNTQLHRTSNMTF 269
Query: 116 L---YSNVTKLQ--HLGTTILKDREKXXX-XXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
L ++N+T L H ++++ N I +LF H ++
Sbjct: 270 LGLKHTNLTMLDLSHNNLNVIENNSFVWLPHLEYFLLEYNNIE----HLFSHSFYGLLNV 325
Query: 170 KKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIEL 229
+ D ++ +I D + F+ L LQ L++ N I+
Sbjct: 326 R---------YLDLKRSFAKQSTSLASHPRIDDFS---FQWLKCLQYLNMEDNYFAGIK- 372
Query: 230 NSNVFDVFEKLQLLEISFSLFN----SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSL 285
SN+F KL+ L +S S + +NE + L TL + N I I + +
Sbjct: 373 -SNMFTGLIKLKHLSLSNSFTSLQTLTNETFLSLAQSPLITLN---LTKNKISKIESGAF 428
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS-NNYLELIESDTFYNLKELNTI 344
L L ++L N+I + + + + EI LS N YL+L S +F + L +
Sbjct: 429 SWLGHLQVLDLGLNEIGQELTGQEWRGL-ENIVEIYLSYNKYLQLTSS-SFALIPSLRRL 486
Query: 345 TLSYNLLKSIKTTS--FKNLNNMLNIV-LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD 401
L L+++ ++ F L N LNI+ LS N I I L L LD+Q N L
Sbjct: 487 MLRRTALRNVDSSPSPFHPLRN-LNILDLSNNNIANINDELLEGLEKLEILDMQHNNLA- 544
Query: 402 FNLNVFSNITSKQTPMNL--NLSNNYITNLYEN--DKKQAPIY-----IKSLDLSNNRIQ 452
++ + + P++ LS+ +I NL N D+ A ++ +KS+DL N +
Sbjct: 545 ---RLWKH-ANPGGPVHFLKGLSHLHILNLESNGFDEIPAEVFKGLSELKSIDLGLNNLN 600
Query: 453 EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG----NLDVLEL----LSLEHNNIAVVV 504
P + SL+ L L N I ++ FG NL L++ +IA V
Sbjct: 601 IFPSSLFNDQV-SLKSLNLQKNLITSVEKNVFGPAFRNLSNLDMSFNPFDCTCESIAWFV 659
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+I + I +LS + + T Q Y F + + +IS + S P ++F
Sbjct: 660 N--WINSTHTNISELSSHYLCN-TPPQ-YHGFPVMLFDISPCK-DSAPFEIF 706
Score = 187 (70.9 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 77/301 (25%), Positives = 134/301 (44%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ +NL +N++ ++ +F + +L + N + +E + L L + L +N
Sbjct: 53 NITVLNLTHNQLRRLPPA--NFTRYSQLTILDGGFNSISKLEPELCQKLPLLEILNLQHN 110
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L + +F N+ + L N IK I N F +L NLVKLDL N L L
Sbjct: 111 ELSHLSDQTFVFCVNLTELHLMSNSIKIIQNNPFRSLKNLVKLDLSHNGLSSTKLGSQLQ 170
Query: 410 ITSKQTPMNLNLSNNYITNLYENDKK-QAPIYIKSLDLSNNRIQEV-PVNFL---QTFAD 464
+ + Q L LSNN I L + ++ L+LS+N I+E P F + F
Sbjct: 171 LENLQ---ELLLSNNKINVLRREELDFLGNSSLEKLELSSNPIKEFSPGCFHAIGKLFGL 227
Query: 465 SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP--NLQIIDLSFN 522
SL + L+ + ++L N + + LSL + + TF+G+ NL ++DLS N
Sbjct: 228 SLNNVQLNPSLTENL-CLELSNTSI-QNLSLSNTQLHRTSNMTFLGLKHTNLTMLDLSHN 285
Query: 523 EISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQDKIRPGRESNP 581
++++ F + L + +N + L F + + LD+ + K S+P
Sbjct: 286 NLNVIENNSFVWLPHLEYFLLEYNNIEHLFSHSFYGLLNVRYLDLKRSFAKQSTSLASHP 345
Query: 582 R 582
R
Sbjct: 346 R 346
Score = 180 (68.4 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 95/385 (24%), Positives = 183/385 (47%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N+ L+L+ N+L+ + +N F + +L +L+ F+ + E P L + L LE L +
Sbjct: 53 NITVLNLTHNQLRRLP-PAN-FTRYSQLTILDGGFNSISKLE-PE--LCQKLPLLEILNL 107
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N + ++ + + +L ++L N I I NN F ++ K L ++ LS+N L +
Sbjct: 108 QHNELSHLSDQTFVFCVNLTELHLMSNSIKIIQNNPFR-SL-KNLVKLDLSHNGLSSTKL 165
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNN--MLNIVLSFNQIKYIYPNAFVNLPNLV 390
+ L+ L + LS N + ++ L N + + LS N IK P F + L
Sbjct: 166 GSQLQLENLQELLLSNNKINVLRREELDFLGNSSLEKLELSSNPIKEFSPGCFHAIGKLF 225
Query: 391 KLDLQDNKLK-DFNLNVFSNITSKQTPMNLNLSNNYI---TNLYENDKKQAPIYIKSLDL 446
L L + +L N+ + S + NL+LSN + +N+ K + + LDL
Sbjct: 226 GLSLNNVQLNPSLTENLCLEL-SNTSIQNLSLSNTQLHRTSNMTFLGLKHTNLTM--LDL 282
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDV--LEL---LSLEHNNI 500
S+N + + N + L L++N I+HL + +F G L+V L+L + + ++
Sbjct: 283 SHNNLNVIENNSF-VWLPHLEYFLLEYNNIEHLFSHSFYGLLNVRYLDLKRSFAKQSTSL 341
Query: 501 AV---VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN--RLRSLPRDV 555
A + +F + LQ +++ N + + F KL+ L++S++ L++L +
Sbjct: 342 ASHPRIDDFSFQWLKCLQYLNMEDNYFAGIKSNMFTGLIKLKHLSLSNSFTSLQTLTNET 401
Query: 556 F---SNTIIEKLDISYNQ-DKIRPG 576
F + + + L+++ N+ KI G
Sbjct: 402 FLSLAQSPLITLNLTKNKISKIESG 426
Score = 164 (62.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 94/397 (23%), Positives = 177/397 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDV-FEKLQLLEISFSLFNSNEFP 256
N I+ L L + L L+ L+L N+L + + VF V +L L+ S + +N F
Sbjct: 86 NSISKLEPELCQKLPLLEILNLQHNELSHLSDQTFVFCVNLTELHLMSNSIKIIQNNPF- 144
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
++L L L + +N + + + S L +L + L NKI+ + F +
Sbjct: 145 -----RSLKNLVKLDLSHNGLSSTKLGSQLQLENLQELLLSNNKINVLRREELDFLGNSS 199
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNN--MLNIVLSFN 373
L+++ LS+N ++ F+ + +L ++L+ L S+ L+N + N+ LS
Sbjct: 200 LEKLELSSNPIKEFSPGCFHAIGKLFGLSLNNVQLNPSLTENLCLELSNTSIQNLSLSNT 259
Query: 374 QIKYIYPNAFVNLP--NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN---LSNNYITN 428
Q+ F+ L NL LDL N NLNV N + P +L L N I +
Sbjct: 260 QLHRTSNMTFLGLKHTNLTMLDLSHN-----NLNVIENNSFVWLP-HLEYFLLEYNNIEH 313
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPV--------NFLQTFADSLRKLYLDFNEIKHLD 480
L+ + + ++ LDL + ++ +F + L+ L ++ N +
Sbjct: 314 LFSHSF-YGLLNVRYLDLKRSFAKQSTSLASHPRIDDFSFQWLKCLQYLNMEDNYFAGIK 372
Query: 481 ATAFGNLDVLELLSLEHN--NIAVVVKRTFIGMPNLQIIDLSF--NEISMLTGEQFYFSF 536
+ F L L+ LSL ++ ++ + TF+ + +I L+ N+IS + F +
Sbjct: 373 SNMFTGLIKLKHLSLSNSFTSLQTLTNETFLSLAQSPLITLNLTKNKISKIESGAFSWLG 432
Query: 537 KLRILNISHNRL-RSLPRDVFSN--TIIEKLDISYNQ 570
L++L++ N + + L + I+E + +SYN+
Sbjct: 433 HLQVLDLGLNEIGQELTGQEWRGLENIVE-IYLSYNK 468
Score = 127 (49.8 bits), Expect = 0.00022, P = 0.00022
Identities = 37/114 (32%), Positives = 59/114 (51%)
Query: 438 PIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
P I L+L++N+++ +P NF T L L FN I L+ L +LE+L+L+
Sbjct: 51 PANITVLNLTHNQLRRLPPANF--TRYSQLTILDGGFNSISKLEPELCQKLPLLEILNLQ 108
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
HN ++ + +TF+ NL + L N I ++ F L L++SHN L S
Sbjct: 109 HNELSHLSDQTFVFCVNLTELHLMSNSIKIIQNNPFRSLKNLVKLDLSHNGLSS 162
>UNIPROTKB|Q3BBY1 [details] [associations]
symbol:Q3BBY1 "Toll-like receptor 3" species:9544 "Macaca
mulatta" [GO:0003725 "double-stranded RNA binding" evidence=ISS]
[GO:0045078 "positive regulation of interferon-gamma biosynthetic
process" evidence=ISS] [GO:0045356 "positive regulation of
interferon-alpha biosynthetic process" evidence=ISS] [GO:0045359
"positive regulation of interferon-beta biosynthetic process"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
GO:GO:0003725 InterPro:IPR000372 SMART:SM00013 GO:GO:0045078
SUPFAM:SSF52200 GO:GO:0045359 CTD:7098 HOVERGEN:HBG023181 KO:K05401
PANTHER:PTHR24365:SF5 GO:GO:0045356 EMBL:AY864735
RefSeq:NP_001031762.1 UniGene:Mmu.3813 ProteinModelPortal:Q3BBY1
SMR:Q3BBY1 STRING:Q3BBY1 GeneID:574378 KEGG:mcc:574378
InParanoid:Q3BBY1 NextBio:19964208 Uniprot:Q3BBY1
Length = 904
Score = 239 (89.2 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 102/381 (26%), Positives = 176/381 (46%)
Query: 213 NLQELSLSFNKLQIIELNSNV--------FDVFEKLQLLEISFSLFNSNEFPYYILNKNL 264
NL L LS N L ++ +S F + +Q L +S SL Y L ++
Sbjct: 275 NLTMLDLSHNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL-LSHSLHGLFNVRYLNLKRSF 333
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
T + +++ + + I ++S LT L ++N+E N IS I +N+F I+ LK + LSN
Sbjct: 334 -TKQSISLAS--LPKIDDFSFRWLTCLEHLNMEDNDISGIKSNMFTGLIN--LKYLSLSN 388
Query: 325 NY--LELIESDTFYNLKE--LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI-KYIY 379
++ L+ + ++TF +L L+ + L+ N + I++ +F L ++ + L N+I + +
Sbjct: 389 SFTSLQTLTNETFVSLAHSPLHILNLTKNKISKIESGAFSWLGHLEVLDLGLNEIGQELT 448
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
+ L N+ ++ L NK N F+ + S Q L L + N+ + P+
Sbjct: 449 GQEWSGLENIFEIYLSYNKYLQLTKNSFALVRSLQ---RLMLRRVALKNVDCSPSPFQPL 505
Query: 440 -YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL--DATAFG------NLDVL 490
+ LDLSNN I + + L+ + L L L N + L A G L L
Sbjct: 506 GNLTILDLSNNNIANINDDMLEGL-EKLEILDLQHNNLARLWKHANPGGPVYFLKGLSHL 564
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
+L+LE N + F + L+IIDL N ++ L F L+ LN+ N + S
Sbjct: 565 HILNLESNGFDEIPVEVFKDLSELKIIDLGLNNLNTLPASVFDNQVSLKSLNLQKNLITS 624
Query: 551 LPRDVFSNTI--IEKLDISYN 569
+ + VF + LD+ +N
Sbjct: 625 VEKKVFGPAFRNLSNLDMRFN 645
Score = 217 (81.4 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 82/318 (25%), Positives = 145/318 (45%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + +N ++ + + + L +++ +N ISK L + LK + L +N L
Sbjct: 56 LNLTHNQLRRLPAANFTRYSQLTILDVGFNSISKPEPELCQ-KL-PMLKVLNLQHNELSQ 113
Query: 330 IESDTF---YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
+ TF NL EL++ LS+++ K IK F N++ + LS N + I V +
Sbjct: 114 LSDKTFAFCMNLTELHS--LSHSIQK-IKNNPFVKQKNLITLDLSHNGLSSIKLGTQVQM 170
Query: 387 PNLVKLDLQDNK---LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
NL +L L +NK LK L + +N + K+ ++ N + + + +++ +
Sbjct: 171 ENLQELLLSNNKIQALKSEELGILANSSLKKLELSSNQIKEFSPGCFHAIGRSLGLFLNN 230
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV--LELLSLEHNNIA 501
+ L +++ + T S+R L L +++ T F L L +L L HNN+
Sbjct: 231 VQLGPRLTEKLCLELANT---SVRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSHNNLN 287
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN------RLRSLPR-D 554
VV +F +P L+ L +N I L + F +R LN+ + L SLP+ D
Sbjct: 288 VVGNDSFAWLPQLEYFFLEYNNIQHLLSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 347
Query: 555 VFSN---TIIEKLDISYN 569
FS T +E L++ N
Sbjct: 348 DFSFRWLTCLEHLNMEDN 365
Score = 198 (74.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 139/560 (24%), Positives = 234/560 (41%)
Query: 11 SVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDAC 70
S N T+ V HL T + D + + L +T L+ + P+A N
Sbjct: 23 SSTNKCTVSQEVADCSHLKLTQVPDD-----LPTNITVLNLTHNQLRRL-PAA--NFTRY 74
Query: 71 YDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY--SNVTKLQHLG 127
LT L + I + L K+ ++ L+L HN+LS L+ T N+T+L L
Sbjct: 75 SQLTILDVGFNSISKPEPELCQKLPMLK--VLNLQHNELSQLSDKTFAFCMNLTELHSLS 132
Query: 128 TTILKDREKXXXXXXXXXXRCNKIT-DLNGNLFRHLQKSIVKAKKNN-----NNNEDQVS 181
+I K + N IT DL+ N ++ +N +NN+ Q
Sbjct: 133 HSIQKIKNNPFVKQK------NLITLDLSHNGLSSIKLGTQVQMENLQELLLSNNKIQAL 186
Query: 182 DREKXXXXXXXXXXRC----NKITDLNGNLFRHLYNLQELSLSFNKLQI-IELNSNV-FD 235
E+ + N+I + + F H + L L N +Q+ L + +
Sbjct: 187 KSEELGILANSSLKKLELSSNQIKEFSPGCF-HAIG-RSLGLFLNNVQLGPRLTEKLCLE 244
Query: 236 VFE-KLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYI 294
+ ++ L +S S ++ ++ K N L L + +NN+ + N S L L Y
Sbjct: 245 LANTSVRNLSLSNSQLSTTSNTTFLGLKWTN-LTMLDLSHNNLNVVGNDSFAWLPQLEYF 303
Query: 295 NLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
LEYN I + L H ++H L +R YL L S T K+ ++S L I
Sbjct: 304 FLEYNNIQHL---LSH-SLHG-LFNVR----YLNLKRSFT----KQ----SISLASLPKI 346
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
SF+ L + ++ + N I I N F L NL L L ++ L + ++
Sbjct: 347 DDFSFRWLTCLEHLNMEDNDISGIKSNMFTGLINLKYLSLSNSFTSLQTLTNETFVSLAH 406
Query: 415 TPMN-LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
+P++ LNL+ N I+ + E+ +++ LDL N I + + +++ ++YL +
Sbjct: 407 SPLHILNLTKNKISKI-ESGAFSWLGHLEVLDLGLNEIGQELTGQEWSGLENIFEIYLSY 465
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVV--VKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N+ L +F + L+ L L + V F + NL I+DLS N I+ + +
Sbjct: 466 NKYLQLTKNSFALVRSLQRLMLRRVALKNVDCSPSPFQPLGNLTILDLSNNNIANINDDM 525
Query: 532 FYFSFKLRILNISHNRLRSL 551
KL IL++ HN L L
Sbjct: 526 LEGLEKLEILDLQHNNLARL 545
Score = 185 (70.2 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 95/390 (24%), Positives = 177/390 (45%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF-P--YYILNKNLNTLEW 269
NLQEL LS NK+Q L S + L ++ S EF P ++ + ++L
Sbjct: 172 NLQELLLSNNKIQA--LKSEELGILANSSLKKLELSSNQIKEFSPGCFHAIGRSLGLFLN 229
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
+ L N TS+ ++L +++S N F L + LS+N L +
Sbjct: 230 NVQLGPRLTEKLCLELAN-TSVRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSHNNLNV 288
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM--LNIVLSFNQ-------IKYIYP 380
+ +D+F L +L L YN ++ + + S L N+ LN+ SF + + I
Sbjct: 289 VGNDSFAWLPQLEYFFLEYNNIQHLLSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 348
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY-----ITNLYENDKK 435
+F L L L+++DN + N+F+ + + + L+LSN++ +TN
Sbjct: 349 FSFRWLTCLEHLNMEDNDISGIKSNMFTGLINLKY---LSLSNSFTSLQTLTNETFVSLA 405
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI-KHLDATAFGNLDVLELLS 494
+P++I L+L+ N+I ++ ++ L L L NEI + L + L+ + +
Sbjct: 406 HSPLHI--LNLTKNKISKIESGAF-SWLGHLEVLDLGLNEIGQELTGQEWSGLENIFEIY 462
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML--TGEQFYFSFKLRILNISHNRLRSLP 552
L +N + K +F + +LQ + L + + + F L IL++S+N + ++
Sbjct: 463 LSYNKYLQLTKNSFALVRSLQRLMLRRVALKNVDCSPSPFQPLGNLTILDLSNNNIANIN 522
Query: 553 RDVFSNTI-IEKLDISYNQDKIRPGRESNP 581
D+ +E LD+ +N + R + +NP
Sbjct: 523 DDMLEGLEKLEILDLQHN-NLARLWKHANP 551
Score = 143 (55.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 78/320 (24%), Positives = 133/320 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLS--FNKLQIIELNSNVFDVFEKLQLLEIS---FSLFNS 252
N I+ + N+F L NL+ LSLS F LQ + + V L +L ++ S S
Sbjct: 365 NDISGIKSNMFTGLINLKYLSLSNSFTSLQTLTNETFVSLAHSPLHILNLTKNKISKIES 424
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNI-KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
F + L LE L + N I + + L ++ I L YNK ++ N F
Sbjct: 425 GAFSW------LGHLEVLDLGLNEIGQELTGQEWSGLENIFEIYLSYNKYLQLTKN--SF 476
Query: 312 NIHKRLKEIRLSNNYLELIESDT--FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ + L+ + L L+ ++ F L L + LS N + +I + L + +
Sbjct: 477 ALVRSLQRLMLRRVALKNVDCSPSPFQPLGNLTILDLSNNNIANINDDMLEGLEKLEILD 536
Query: 370 LSFNQIKYIYPNA-------FVN-LPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLN 420
L N + ++ +A F+ L +L L+L+ N + + VF +++ K + LN
Sbjct: 537 LQHNNLARLWKHANPGGPVYFLKGLSHLHILNLESNGFDEIPVEVFKDLSELKIIDLGLN 596
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
N ++++N + +KSL+L N I V +L L + FN D
Sbjct: 597 NLNTLPASVFDNQ-----VSLKSLNLQKNLITSVEKKVFGPAFRNLSNLDMRFNPF---D 648
Query: 481 ATAFGNLDVLELLSLEHNNI 500
T + +S H NI
Sbjct: 649 CTCESIAWFVNWISKTHANI 668
Score = 118 (46.6 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 1 MTLDLSHNKLSVLNMATLYS--NVTKLQHLGTTI--LKGDQLQGIFNSKLRELEITGKDL 56
+TLDLSHN LS + + T N+ +L I LK ++L + NS L++LE++ +
Sbjct: 150 ITLDLSHNGLSSIKLGTQVQMENLQELLLSNNKIQALKSEELGILANSSLKKLELSSNQI 209
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQI-EELPSGLFDKIENIEQMTLDLSHNKLSVLNMAT 115
K P F I L L + N Q+ L L ++ N L LS+++LS + T
Sbjct: 210 KEFSPGCFHAIGR--SLGLFLNNVQLGPRLTEKLCLELANTSVRNLSLSNSQLSTTSNTT 267
Query: 116 L----YSNVTKL 123
++N+T L
Sbjct: 268 FLGLKWTNLTML 279
Score = 69 (29.3 bits), Expect = 8.8e-19, Sum P(2) = 8.8e-19
Identities = 29/108 (26%), Positives = 49/108 (45%)
Query: 3 LDLSHNKLSVLNMATLY--SNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
L+L HN+LS L+ T N+T+L L +I K + L L+++ L I
Sbjct: 104 LNLQHNELSQLSDKTFAFCMNLTELHSLSHSIQKIKNNPFVKQKNLITLDLSHNGLSSIK 163
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
++ +L L +N +I+ L S + N L+LS N++
Sbjct: 164 LGTQVQMENLQELLL--SNNKIQALKSEELGILANSSLKKLELSSNQI 209
Score = 69 (29.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 3 LDLSHNKLSVL---NMATLYS-NVTKLQHLGTTILKGDQLQGIFNSKLRELE--ITGKDL 56
LDLSHN L+V+ + A L L++ L L G+FN + L+ T + +
Sbjct: 279 LDLSHNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLLSHSLHGLFNVRYLNLKRSFTKQSI 338
Query: 57 KFIDPSAFDNID----ACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLN 112
D+ C + L + + I + S +F + N++ ++L S L L
Sbjct: 339 SLASLPKIDDFSFRWLTCLE-HLNMEDNDISGIKSNMFTGLINLKYLSLSNSFTSLQTLT 397
Query: 113 MATLYS 118
T S
Sbjct: 398 NETFVS 403
Score = 60 (26.2 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 30/117 (25%), Positives = 57/117 (48%)
Query: 5 LSHNKLSVLNMATL----YSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
LS+NK+ L L S++ KL+ L + +K + G F++ R L + +++ +
Sbjct: 178 LSNNKIQALKSEELGILANSSLKKLE-LSSNQIK-EFSPGCFHAIGRSLGLFLNNVQ-LG 234
Query: 61 PSAFDNIDACYDLT------LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
P + + C +L L ++N+Q+ + F ++ LDLSHN L+V+
Sbjct: 235 PRLTEKL--CLELANTSVRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSHNNLNVV 289
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 305 (112.4 bits), Expect = 9.1e-24, P = 9.1e-24
Identities = 137/574 (23%), Positives = 249/574 (43%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSK-----LRELEITGKDL 56
TL LSHN+++ ++ ++ + KL++L + + GI + L L++ +
Sbjct: 174 TLLLSHNQITHIHKDA-FTPLVKLKYLSLSRNRISNFSGILEAVQHLPCLEHLDLINNSI 232
Query: 57 KFIDPSAFDNIDACYDLTLKITN-TQIE----ELPSGL-FDKIENIEQMTLDLSHNKLSV 110
++D S + + L+ + N T++ LP+ +N + D+ L
Sbjct: 233 MYLDHSPRSLVSLTH-LSFEGNNLTELNFSTLSLPNLTNLSASQNGHGVIQDVYLKTLPQ 291
Query: 111 LNMATLYSNVTKLQHLGTTILKD-REKXXXXXXXXXXRCN-KITDLNGNLFRHLQKSIVK 168
L L V KL+ L L++ R N KI L R+L +
Sbjct: 292 LQSLNLSGTVVKLEMLSAKHLQNVRVMDLSNRELKHGHLNMKIVCY---LLRNLPMLEIL 348
Query: 169 AKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIE 228
N N + + K + + + LN + F L +LQ L+L NK Q+
Sbjct: 349 FFHKNATNAEGIKQLAKCTRLLFLDLGQNSDLVHLNDSEFNALPSLQRLNL--NKCQLSF 406
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
+++ + + L +L++S + F S FP + + L LE+L++ N I + N + L
Sbjct: 407 ISNKTWSSLQNLTILDLSHNKFKS--FPDFAFSP-LKRLEFLSLSRNPITELNNLAFSGL 463
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
SL +NL I I + F L+ + L +N + + TF LK+L+T+ LS+
Sbjct: 464 FSLKELNLAACWIVTIDR--YSFTQFPNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSH 521
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L+ +++ +F L + + L +N + Y + + F+ L L+ L L NK+ +
Sbjct: 522 NRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLKLGFNKI------TYE 575
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-----PVNFLQTFA 463
+ Q P + L + NL E K + ++ + +QE+ P FL
Sbjct: 576 TTRTLQYPPFMKLKSLKQLNL-EGQKHGIQVVPRNFFQGLSSLQELLLGKNPSVFLDHHQ 634
Query: 464 -DSLRKLY-LDFNEIK------HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
D L L LD + K +L+++ F NL L++L LE+NN+ +V F + NLQ
Sbjct: 635 FDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRLKVLRLENNNLESLVPGMFSSLQNLQ 694
Query: 516 IIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
+ L FN + ++ L ++ N+L+
Sbjct: 695 VFSLRFNNLKVINQSHLENLKSLMFFDVYGNKLQ 728
Score = 251 (93.4 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 138/545 (25%), Positives = 237/545 (43%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L +T ++ + P +F N+ A DL L+ N I ++ G F +EN+ L+L NK+
Sbjct: 104 LNLTNNYIQVLPPWSFTNLSALVDLRLE-WNL-IWKIDEGAFRGLENLT--LLNLVENKI 159
Query: 109 -SVLNMATLYSNVTKL--QHLGTT-ILKDREKXXXXXXXXXXRCNKITDLNGNL--FRHL 162
SV N SN+ L H T I KD N+I++ +G L +HL
Sbjct: 160 QSVNNSFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRISNFSGILEAVQHL 219
Query: 163 QKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFN 222
++ NN+ + + N +T+LN + L NL LS S N
Sbjct: 220 P--CLEHLDLINNSIMYLDHSPRSLVSLTHLSFEGNNLTELNFSTLS-LPNLTNLSASQN 276
Query: 223 KLQIIELNSNVF-DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIR 281
+I+ +V+ +LQ L +S ++ + K+L + + + N +K
Sbjct: 277 GHGVIQ---DVYLKTLPQLQSLNLSGTVVKLE----MLSAKHLQNVRVMDLSNRELK--- 326
Query: 282 NYSLYNLTSLNYI--NLEYNKISKIHNNLFHFNIHKRL-KEIRL------SNNYLELIES 332
+ N+ + Y+ NL +I H N + K+L K RL N+ L +
Sbjct: 327 -HGHLNMKIVCYLLRNLPMLEILFFHKNATNAEGIKQLAKCTRLLFLDLGQNSDLVHLND 385
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
F L L + L+ L I ++ +L N+ + LS N+ K AF L L L
Sbjct: 386 SEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFL 445
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ 452
L N + + N FS + S + LNL+ +I + Q P ++ LDL +N I+
Sbjct: 446 SLSRNPITELNNLAFSGLFSLK---ELNLAACWIVTIDRYSFTQFP-NLEVLDLGDNNIR 501
Query: 453 EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP 512
+ Q L L L N ++ +++ AF L L L L +N+++ K F+G+
Sbjct: 502 TLNHGTFQPLK-KLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLE 560
Query: 513 NLQIIDLSFNEISMLTGE--QF--YFSFK-LRILNISHNR--LRSLPRDVFSN-TIIEKL 564
L ++ L FN+I+ T Q+ + K L+ LN+ + ++ +PR+ F + +++L
Sbjct: 561 KLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVVPRNFFQGLSSLQEL 620
Query: 565 DISYN 569
+ N
Sbjct: 621 LLGKN 625
Score = 210 (79.0 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 90/369 (24%), Positives = 165/369 (44%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNE 254
+C +++ ++ + L NL L LS NK + F ++L+ L +S + + N
Sbjct: 401 KC-QLSFISNKTWSSLQNLTILDLSHNKFK--SFPDFAFSPLKRLEFLSLSRNPITELNN 457
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
+ L +L+ L + I I YS +L ++L N I +++ F
Sbjct: 458 LAF----SGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQ--PL 511
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K+L + LS+N LE++ES+ F L L + L YN L F L +L + L FN+
Sbjct: 512 KKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLKLGFNK 571
Query: 375 IKYI------YPNAFVNLPNLVKLDLQDNK--LKDFNLNVFSNITSKQTPMNLNLSNNYI 426
I Y YP F+ L +L +L+L+ K ++ N F ++S Q L L N
Sbjct: 572 ITYETTRTLQYP-PFMKLKSLKQLNLEGQKHGIQVVPRNFFQGLSSLQ---ELLLGKNPS 627
Query: 427 TNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY---LDFNEIKHLDATA 483
L ++ + I + LD+S + + + + +L++L L+ N ++ L
Sbjct: 628 VFL-DHHQFDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRLKVLRLENNNLESLVPGM 686
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNI 543
F +L L++ SL NN+ V+ + + +L D+ N++ ++ ++ + +
Sbjct: 687 FSSLQNLQVFSLRFNNLKVINQSHLENLKSLMFFDVYGNKLQCTCDNLWFKNWSMNTEEV 746
Query: 544 SHNRLRSLP 552
LRS P
Sbjct: 747 HIPFLRSYP 755
Score = 186 (70.5 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 113/489 (23%), Positives = 200/489 (40%)
Query: 71 YDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL--YSNVTKLQHLGT 128
Y L +TN I+ LP F + + + L L N + ++ N+T L +
Sbjct: 100 YTTHLNLTNNYIQVLPPWSFTNLSAL--VDLRLEWNLIWKIDEGAFRGLENLTLLNLVEN 157
Query: 129 TI--LKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQK-SIVKAKKNNNNNEDQVSDREK 185
I + + + N+IT ++ + F L K + +N +N + + +
Sbjct: 158 KIQSVNNSFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRISNFSGILEAVQ 217
Query: 186 XXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
N I L+ + R L +L LS N L ELN F L +
Sbjct: 218 HLPCLEHLDLINNSIMYLDHSP-RSLVSLTHLSFEGNNLT--ELN---FSTLSLPNLTNL 271
Query: 246 SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
S S N + + K L L+ L + +K + S +L ++ ++L ++ H
Sbjct: 272 SASQ-NGHGVIQDVYLKTLPQLQSLNLSGTVVK-LEMLSAKHLQNVRVMDLSNRELKHGH 329
Query: 306 NNL-FHFNIHKRLKEIRLSNNYLELIESDTFYNLKE---LNTITLSYNL-LKSIKTTSFK 360
N+ + + L + + + ++ L + L + L N L + + F
Sbjct: 330 LNMKIVCYLLRNLPMLEILFFHKNATNAEGIKQLAKCTRLLFLDLGQNSDLVHLNDSEFN 389
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
L ++ + L+ Q+ +I + +L NL LDL NK K F FS + K+ L+
Sbjct: 390 ALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFSPL--KRLEF-LS 446
Query: 421 LSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
LS N IT L N+ + ++ +K L+L+ I + + T +L L L N I+ L
Sbjct: 447 LSRNPITEL--NNLAFSGLFSLKELNLAACWIVTID-RYSFTQFPNLEVLDLGDNNIRTL 503
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
+ F L L L L HN + ++ F G+ L+ +DL +N +S F KL
Sbjct: 504 NHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLL 563
Query: 540 ILNISHNRL 548
+L + N++
Sbjct: 564 VLKLGFNKI 572
Score = 162 (62.1 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 62/241 (25%), Positives = 118/241 (48%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
+I + + L+NNY++++ +F NL L + L +NL+ I +F+ L N+ + L
Sbjct: 96 DIPRYTTHLNLTNNYIQVLPPWSFTNLSALVDLRLEWNLIWKIDEGAFRGLENLTLLNLV 155
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I+ + N+F L NL L L N++ + + F+ + + L+LS N I+N
Sbjct: 156 ENKIQSVN-NSFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKY---LSLSRNRISNFSG 211
Query: 432 N-DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
+ Q ++ LDL NN I + + ++ SL L + N + L+ + +L L
Sbjct: 212 ILEAVQHLPCLEHLDLINNSIMYLD-HSPRSLV-SLTHLSFEGNNLTELNFSTL-SLPNL 268
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN--EISMLTGEQFYFSFKLRILNISHNRL 548
LS N V+ +P LQ ++LS ++ ML+ + +R++++S+ L
Sbjct: 269 TNLSASQNGHGVIQDVYLKTLPQLQSLNLSGTVVKLEMLSAKHLQ---NVRVMDLSNREL 325
Query: 549 R 549
+
Sbjct: 326 K 326
Score = 160 (61.4 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 92/396 (23%), Positives = 170/396 (42%)
Query: 199 KITDLNGNLFRHLY-NLQELSLSFNKLQIIEL---NSNVFDVFEKLQLLEISFSLF---N 251
++ DL+ +H + N++ + L ++E+ + N + QL + + LF
Sbjct: 316 RVMDLSNRELKHGHLNMKIVCYLLRNLPMLEILFFHKNATNAEGIKQLAKCTRLLFLDLG 375
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNN---IKNIRNYSLYNLTSLNYINLEYNKISKIHNNL 308
N ++ + N L L N N + I N + +L +L ++L +NK +
Sbjct: 376 QNSDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPD-- 433
Query: 309 FHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNI 368
F F+ KRL+ + LS N + + + F L L + L+ + +I SF N+ +
Sbjct: 434 FAFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVL 493
Query: 369 VLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITN 428
L N I+ + F L L L L N+L+ N FS +T + L+L N ++
Sbjct: 494 DLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRY---LDLMYNSLSY 550
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQ--TFAD--SLRKLYLDFNE--IKHLDAT 482
+++ + L L N+I LQ F SL++L L+ + I+ +
Sbjct: 551 FHKHHFMGLEKLLV-LKLGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVVPRN 609
Query: 483 AFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN---EISMLTGEQFYFSFK-L 538
F L L+ L L N + F + NL +D+S + S+ + + K L
Sbjct: 610 FFQGLSSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRL 669
Query: 539 RILNISHNRLRSLPRDVFSNTI-IEKLDISYNQDKI 573
++L + +N L SL +FS+ ++ + +N K+
Sbjct: 670 KVLRLENNNLESLVPGMFSSLQNLQVFSLRFNNLKV 705
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 304 (112.1 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 136/576 (23%), Positives = 245/576 (42%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSK-----LRELEITGKDL 56
TL LSHN+++ ++ ++ + KL++L + GI + L L++T +
Sbjct: 178 TLLLSHNQITHIHKDA-FTPLIKLKYLSLSRNNISDFSGILEAVQHLPCLERLDLTNNSI 236
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNK--------- 107
++D S + + L ++ EL + N+ ++ + NK
Sbjct: 237 MYLDHSPRSLVSLTH---LSFEGNKLRELNFSALS-LPNLTNLSASRNGNKVIQNVYLKT 292
Query: 108 LSVLNMATLYSNVTKLQHLGTTILKD-REKXXXXXXXXXXRCNKITDLNGNLFRHLQKSI 166
L L L V KL++L L++ R + T + L +L K
Sbjct: 293 LPQLKSLNLSGTVIKLENLSAKHLQNLRAMDLSNWELRHGHLDMKTVCH--LLGNLPKLE 350
Query: 167 VKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQI 226
+ N N + + K + + + LN + F L +LQ+L+L NK Q+
Sbjct: 351 TLVFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALPSLQKLNL--NKCQL 408
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
+N+ + + L L++S + F S FP + + L LE+L++ N I + N +
Sbjct: 409 SFINNRTWSSLQNLTSLDLSHNKFKS--FPDFAFSP-LKHLEFLSLSRNPITELNNLAFS 465
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL 346
L +L +NL I I + F L+ + L +N + + TF LK+L ++ L
Sbjct: 466 GLFALKELNLAACWIVTIDR--YSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLIL 523
Query: 347 SYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
S+N LK ++ SF L N+ ++ L +N + Y + + F L L+ L L NK+
Sbjct: 524 SHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKI------T 577
Query: 407 FSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-----PVNFLQT 461
+ + Q P + L + NL E + + + +QE+ P FL
Sbjct: 578 YETTRTLQYPPFIKLKSLKQLNL-EGQRHGIQVVPSNFFQGLGSLQELLLGKNPSVFLDH 636
Query: 462 FA-DSLRKLY-LDFNEIK------HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
D L L LD + K +L+A+ F NL L++L LE+NN+ +V F + +
Sbjct: 637 HQFDPLINLTKLDISGTKDGDRSLYLNASLFQNLKRLKILRLENNNLESLVPDMFSSLQS 696
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
LQ+ L FN + ++ L ++ N+L+
Sbjct: 697 LQVFSLRFNNLKVINQSHLKNLKSLMFFDVYGNKLQ 732
Score = 266 (98.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 98/355 (27%), Positives = 171/355 (48%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEIS-FSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
L L N +I LN + F+ LQ L ++ L N + L +NL +L+ + +N
Sbjct: 376 LDLGQNS-DLIYLNDSEFNALPSLQKLNLNKCQLSFINNRTWSSL-QNLTSLD---LSHN 430
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
K+ +++ L L +++L N I+++ NNL + LKE+ L+ ++ I+ +F
Sbjct: 431 KFKSFPDFAFSPLKHLEFLSLSRNPITEL-NNLAFSGLFA-LKELNLAACWIVTIDRYSF 488
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
L + L N ++++ +F+ L + +++LS N +K + PN+F L NL LDL
Sbjct: 489 TQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLM 548
Query: 396 DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK-QAPIYIK-----SLDLSNN 449
N L F+ ++FS + + + L L N IT YE + Q P +IK L+L
Sbjct: 549 YNSLSYFHEHLFSGL---EKLLILKLGFNKIT--YETTRTLQYPPFIKLKSLKQLNLEGQ 603
Query: 450 R--IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG---NLDVLELLSLEHNNIAVVV 504
R IQ VP NF Q SL++L L N LD F NL L++ + + ++ +
Sbjct: 604 RHGIQVVPSNFFQGLG-SLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYL 662
Query: 505 KRT-FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
+ F + L+I+ L N + L + F L++ ++ N L+ + + N
Sbjct: 663 NASLFQNLKRLKILRLENNNLESLVPDMFSSLQSLQVFSLRFNNLKVINQSHLKN 717
Score = 244 (91.0 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 131/526 (24%), Positives = 232/526 (44%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L +T +++ + P +F N+ A DL L+ + I ++ G F +EN+ L+L NK+
Sbjct: 108 LNLTHNEIQVLPPWSFTNLSALVDLRLEWNS--IWKIDEGAFRGLENLT--LLNLVENKI 163
Query: 109 SVLNMAT--LYSNVTKL-QHLGTT-ILKDREKXXXXXXXXXXRCNKITDLNGNL--FRHL 162
+N + L S T L H T I KD N I+D +G L +HL
Sbjct: 164 QSVNNSFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSGILEAVQHL 223
Query: 163 QKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFN 222
++ NN+ + + NK+ +LN + L NL LS S N
Sbjct: 224 P--CLERLDLTNNSIMYLDHSPRSLVSLTHLSFEGNKLRELNFSALS-LPNLTNLSASRN 280
Query: 223 KLQIIELNSNVF-DVFEKLQLLEISFSLFN-SNEFPYYILN-KNLNTLEW-LAMDNNNIK 278
++I+ NV+ +L+ L +S ++ N ++ N + ++ W L + ++K
Sbjct: 281 GNKVIQ---NVYLKTLPQLKSLNLSGTVIKLENLSAKHLQNLRAMDLSNWELRHGHLDMK 337
Query: 279 NIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN- 337
+ + L NL L + + N + + RL + L N + +D+ +N
Sbjct: 338 TVCHL-LGNLPKLETLVFQKNVTNA--EGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNA 394
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L L + L+ L I ++ +L N+ ++ LS N+ K AF L +L L L N
Sbjct: 395 LPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRN 454
Query: 398 KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN 457
+ + N FS + + + LNL+ +I + Q P ++ LDL +N I+ +
Sbjct: 455 PITELNNLAFSGLFALK---ELNLAACWIVTIDRYSFTQFP-NLEVLDLGDNNIRTLNHG 510
Query: 458 FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
+ L+ L L N +K L+ +F L L L L +N+++ + F G+ L I+
Sbjct: 511 TFRPLK-KLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLIL 569
Query: 518 DLSFNEISMLTGE--QF--YFSFK-LRILNISHNR--LRSLPRDVF 556
L FN+I+ T Q+ + K L+ LN+ R ++ +P + F
Sbjct: 570 KLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFF 615
Score = 219 (82.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 140/563 (24%), Positives = 238/563 (42%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLG---TTILKGDQ--LQGIFNSKLRELEITGKDLK 57
L+L+HN++ VL + ++N++ L L +I K D+ +G+ N L L + ++
Sbjct: 108 LNLTHNEIQVLPPWS-FTNLSALVDLRLEWNSIWKIDEGAFRGLENLTL--LNLVENKIQ 164
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLN-MATL 116
++ S F+ + + TL +++ QI + F + I+ L LS N +S + +
Sbjct: 165 SVNNS-FEGLSSLK--TLLLSHNQITHIHKDAFTPL--IKLKYLSLSRNNISDFSGILEA 219
Query: 117 YSNVTKLQHLGTT-----ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKK 171
++ L+ L T L + NK+ +LN + + + A +
Sbjct: 220 VQHLPCLERLDLTNNSIMYLDHSPRSLVSLTHLSFEGNKLRELNFSALSLPNLTNLSASR 279
Query: 172 NNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELN- 230
N N V + K+ +L+ +HL NL+ + LS +L+ L+
Sbjct: 280 NGNKVIQNVYLKTLPQLKSLNLSGTVIKLENLSA---KHLQNLRAMDLSNWELRHGHLDM 336
Query: 231 SNVFDVFEKLQLLE-ISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN-L 288
V + L LE + F +N L K L +L + N+ N S +N L
Sbjct: 337 KTVCHLLGNLPKLETLVFQKNVTNAEGIKQLAKCTRLL-FLDLGQNSDLIYLNDSEFNAL 395
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
SL +NL ++S I+N + + + L + LS+N + F LK L ++LS
Sbjct: 396 PSLQKLNLNKCQLSFINNRTW--SSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSR 453
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N + + +F L + + L+ I I +F PNL LDL DN ++ N F
Sbjct: 454 NPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFR 513
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
+ Q+ L LS+N + + E + ++SLDL N + + + L
Sbjct: 514 PLKKLQS---LILSHNCL-KILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGL-EKLLI 568
Query: 469 LYLDFNEIKH-----LDATAFGNLDVLELLSLE--HNNIAVVVKRTFIGMPNLQIIDLSF 521
L L FN+I + L F L L+ L+LE + I VV F G+ +LQ + L
Sbjct: 569 LKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFFQGLGSLQELLLGK 628
Query: 522 NEISMLTGEQFYFSFKLRILNIS 544
N L QF L L+IS
Sbjct: 629 NPSVFLDHHQFDPLINLTKLDIS 651
Score = 214 (80.4 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 89/372 (23%), Positives = 163/372 (43%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS---FSLFNS 252
+C +++ +N + L NL L LS NK + F + L+ L +S + N+
Sbjct: 405 KC-QLSFINNRTWSSLQNLTSLDLSHNKFK--SFPDFAFSPLKHLEFLSLSRNPITELNN 461
Query: 253 NEFPYYILNKNLNTLE-WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
F K LN W+ I YS +L ++L N I +++ F
Sbjct: 462 LAFSGLFALKELNLAACWIV-------TIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFR- 513
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
K+L+ + LS+N L+++E ++F L L ++ L YN L F L +L + L
Sbjct: 514 -PLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLG 572
Query: 372 FNQIKYI------YPNAFVNLPNLVKLDLQDNK--LKDFNLNVFSNITSKQTPMNLNLSN 423
FN+I Y YP F+ L +L +L+L+ + ++ N F + S Q L L
Sbjct: 573 FNKITYETTRTLQYP-PFIKLKSLKQLNLEGQRHGIQVVPSNFFQGLGSLQ---ELLLGK 628
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY---LDFNEIKHLD 480
N L ++ + I + LD+S + + + + +L++L L+ N ++ L
Sbjct: 629 NPSVFL-DHHQFDPLINLTKLDISGTKDGDRSLYLNASLFQNLKRLKILRLENNNLESLV 687
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
F +L L++ SL NN+ V+ + + +L D+ N++ ++ ++ +
Sbjct: 688 PDMFSSLQSLQVFSLRFNNLKVINQSHLKNLKSLMFFDVYGNKLQCTCDNLWFKNWSMNT 747
Query: 541 LNISHNRLRSLP 552
+ LRS P
Sbjct: 748 EEVHIPFLRSYP 759
Score = 181 (68.8 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 95/381 (24%), Positives = 170/381 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS--NEF 255
N+I L F +L L +L L +N I +++ F E L LL + + S N F
Sbjct: 113 NEIQVLPPWSFTNLSALVDLRLEWNS--IWKIDEGAFRGLENLTLLNLVENKIQSVNNSF 170
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L++L+ L + +N I +I + L L Y++L N IS L
Sbjct: 171 ------EGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSGILEAVQHLP 224
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+ + L+NN + ++ +L L ++ N L+ + ++ +L N+ N+ S N
Sbjct: 225 CLERLDLTNNSIMYLDHSP-RSLVSLTHLSFEGNKLRELNFSAL-SLPNLTNLSASRNGN 282
Query: 376 KYIYPNAFVN-LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
K I N ++ LP L L+L +K NL+ Q ++LSN + + + + K
Sbjct: 283 KVIQ-NVYLKTLPQLKSLNLSGTVIKLENLSA----KHLQNLRAMDLSNWELRHGHLDMK 337
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNF--LQTFADSLRKLYLDF---NEIKHLDATAFGNLDV 489
+ L Q+ N ++ A R L+LD +++ +L+ + F L
Sbjct: 338 TVCHLLGNLPKLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALPS 397
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS-FK-LRILNISHNR 547
L+ L+L ++ + RT+ + NL +DLS N+ F FS K L L++S N
Sbjct: 398 LQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFP--DFAFSPLKHLEFLSLSRNP 455
Query: 548 LRSLPRDVFSNTI-IEKLDIS 567
+ L FS +++L+++
Sbjct: 456 ITELNNLAFSGLFALKELNLA 476
Score = 175 (66.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 76/263 (28%), Positives = 125/263 (47%)
Query: 309 FHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNI 368
+ F+IH L + N E I Y LN L++N ++ + SF NL+ ++++
Sbjct: 77 YEFDIHHVLCIRKKITNLTEAISDIPRYTT-HLN---LTHNEIQVLPPWSFTNLSALVDL 132
Query: 369 VLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITN 428
L +N I I AF L NL L+L +NK++ N N F ++S +T L LS+N IT+
Sbjct: 133 RLEWNSIWKIDEGAFRGLENLTLLNLVENKIQSVN-NSFEGLSSLKT---LLLSHNQITH 188
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD--SLRKLYLDFNEIKHLDATAFGN 486
+++ D I +K L LS N I + L+ L +L L N I +LD + +
Sbjct: 189 IHK-DAFTPLIKLKYLSLSRNNISDFS-GILEAVQHLPCLERLDLTNNSIMYLDHSP-RS 245
Query: 487 LDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
L L LS E N + + + + +PNL + S N ++ +L+ LN+S
Sbjct: 246 LVSLTHLSFEGNKLREL-NFSALSLPNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSGT 304
Query: 547 --RLRSLPRDVFSNTIIEKLDIS 567
+L +L N + +D+S
Sbjct: 305 VIKLENLSAKHLQN--LRAMDLS 325
>ZFIN|ZDB-GENE-040219-15 [details] [associations]
symbol:tlr5b "toll-like receptor 5b" species:7955
"Danio rerio" [GO:0034146 "toll-like receptor 5 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0050707 "regulation of cytokine secretion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001819 "positive regulation of cytokine production"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027176
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040219-15 GO:GO:0016021 GO:GO:0007165
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 PANTHER:PTHR24365:SF7
EMBL:FP017156 IPI:IPI00883072 Ensembl:ENSDART00000148798
Uniprot:F8W4F1
Length = 885
Score = 264 (98.0 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 104/371 (28%), Positives = 188/371 (50%)
Query: 205 GNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFE--KLQLLEISF------SLFNSNEFP 256
GN F++ ++ L LS N + ++ FD K+Q L IS S ++++ P
Sbjct: 227 GNPFKNT-SITTLDLSGNGFNV-DMAKRFFDAISSTKIQSLIISNTYRIGKSSGDNSKDP 284
Query: 257 YYILNKNLNT--LEWLAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNI 313
L + ++ + N++I ++ YS+++ L+ L I L ++I+KI NN F +
Sbjct: 285 DKSTFSGLKSSGIKSFDLSNSSIFSL-TYSVFSYLSDLEQITLAESQINKIENNAF-LGM 342
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
LK + LS N+L I+ TF NLK L + LSYN + + + SF+ L N+L++ L+ N
Sbjct: 343 TNLLK-LNLSKNFLGYIDFRTFQNLKGLEVLDLSYNHIWRLGSQSFQGLPNLLSLNLTGN 401
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE-- 431
+ ++Y F LP L KL L DN ++ + + NI +K L+L N I ++ E
Sbjct: 402 SLGHVY--TFATLPKLEKLYLGDNNIQ-YVYEI-PNI-AKHLK-TLDLQFNQIASMSELY 455
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA-----TAFGN 486
+ P I+ + N++ P + + + +++ L L F ++ + + F +
Sbjct: 456 TILDEFP-QIEEVVFRGNQLLYCPQDNHEVLSQNIQVLDLSFAGLQVIWSEGKCLNVFDD 514
Query: 487 LDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
L LE+L L N + + K F + +L I+DLSFN + L + F L++L++ +N
Sbjct: 515 LHQLEVLHLSSNLLQSLPKDIFKDLTSLLILDLSFNSLKYLPTD--VFPKTLQVLHLDYN 572
Query: 547 RLRSLPRDVFS 557
+ S+ ++FS
Sbjct: 573 SIYSVDPNLFS 583
Score = 206 (77.6 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 87/354 (24%), Positives = 164/354 (46%)
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
++L+ N F+V + + F +S + I++ N + + DN+ + +S
Sbjct: 238 LDLSGNGFNV----DMAKRFFDAISSTKIQSLIIS-NTYRIGKSSGDNSKDPDKSTFSGL 292
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL 346
+ + +L + I + ++F + L++I L+ + + IE++ F + L + L
Sbjct: 293 KSSGIKSFDLSNSSIFSLTYSVFSYL--SDLEQITLAESQINKIENNAFLGMTNLLKLNL 350
Query: 347 SYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
S N L I +F+NL + + LS+N I + +F LPNL+ L+L N L ++
Sbjct: 351 SKNFLGYIDFRTFQNLKGLEVLDLSYNHIWRLGSQSFQGLPNLLSLNLTGNSLG--HVYT 408
Query: 407 FSNITSKQTPMNLNLSNNYITNLYE--NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD 464
F+ + + L L +N I +YE N K ++K+LDL N+I + + L T D
Sbjct: 409 FATLPKLE---KLYLGDNNIQYVYEIPNIAK----HLKTLDLQFNQIASM--SELYTILD 459
Query: 465 S---LRKLYLDFNEIKHLDATAFGNLDV-LELLSLEHNNIAVVVKR-----TFIGMPNLQ 515
+ ++ N++ + L +++L L + V+ F + L+
Sbjct: 460 EFPQIEEVVFRGNQLLYCPQDNHEVLSQNIQVLDLSFAGLQVIWSEGKCLNVFDDLHQLE 519
Query: 516 IIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
++ LS N + L + F L IL++S N L+ LP DVF T+ + L + YN
Sbjct: 520 VLHLSSNLLQSLPKDIFKDLTSLLILDLSFNSLKYLPTDVFPKTL-QVLHLDYN 572
Score = 188 (71.2 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 83/346 (23%), Positives = 162/346 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
+ I L ++F +L +L++++L+ + QI ++ +N F L L +S + +F
Sbjct: 305 SSIFSLTYSVFSYLSDLEQITLA--ESQINKIENNAFLGMTNLLKLNLSKNFLGYIDFRT 362
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ +NL LE L + N+I + + S L +L +NL N + ++ F +L
Sbjct: 363 F---QNLKGLEVLDLSYNHIWRLGSQSFQGLPNLLSLNLTGNSLGHVYT----FATLPKL 415
Query: 318 KEIRLSNNYLELIESDTFYNL-KELNTITLSYNLLKSIKT--TSFKNLNNMLNIVLSFNQ 374
+++ L +N ++ + N+ K L T+ L +N + S+ T + +V NQ
Sbjct: 416 EKLYLGDNNIQYVYE--IPNIAKHLKTLDLQFNQIASMSELYTILDEFPQIEEVVFRGNQ 473
Query: 375 IKYI-YPNAFVNLPNLVKLDLQDNKLKDF-----NLNVFSNITSKQTPMNLNLSNNYITN 428
+ Y N V N+ LDL L+ LNVF ++ + L+LS+N + +
Sbjct: 474 LLYCPQDNHEVLSQNIQVLDLSFAGLQVIWSEGKCLNVFDDLHQLEV---LHLSSNLLQS 530
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLD 488
L ++ K + LDLS N ++ +P + F +L+ L+LD+N I +D F L
Sbjct: 531 LPKDIFKDLTSLL-ILDLSFNSLKYLPTD---VFPKTLQVLHLDYNSIYSVDPNLFSTLS 586
Query: 489 VLELLSLEHN-NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
L L++ + + + +T++ N+ + S +++ + E Y
Sbjct: 587 YLSLMNNDFRCDCDLKDFQTWLNQTNITFVH-SIEDVTCASPEDQY 631
Score = 186 (70.5 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 79/306 (25%), Positives = 137/306 (44%)
Query: 246 SFSLFNSNEFPY-YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI 304
SF L NS+ F Y + L+ LE + + + I I N + +T+L +NL N + I
Sbjct: 299 SFDLSNSSIFSLTYSVFSYLSDLEQITLAESQINKIENNAFLGMTNLLKLNLSKNFLGYI 358
Query: 305 HNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNN 364
F N+ K L+ + LS N++ + S +F L L ++ L+ N L + T F L
Sbjct: 359 DFRTFQ-NL-KGLEVLDLSYNHIWRLGSQSFQGLPNLLSLNLTGNSLGHVYT--FATLPK 414
Query: 365 MLNIVLSFNQIKYIYPNAFVNLPNLVK----LDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
+ + L N I+Y+Y +PN+ K LDLQ N++ + +++ + +
Sbjct: 415 LEKLYLGDNNIQYVY-----EIPNIAKHLKTLDLQFNQIASMS-ELYTILDEFPQIEEVV 468
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV--PVNFLQTFAD--SLRKLYLDFNEI 476
N + +++ + I+ LDLS +Q + L F D L L+L N +
Sbjct: 469 FRGNQLLYCPQDNHEVLSQNIQVLDLSFAGLQVIWSEGKCLNVFDDLHQLEVLHLSSNLL 528
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
+ L F +L L +L L N++ + F LQ++ L +N I + F
Sbjct: 529 QSLPKDIFKDLTSLLILDLSFNSLKYLPTDVF--PKTLQVLHLDYNSIYSVDPNLFSTLS 586
Query: 537 KLRILN 542
L ++N
Sbjct: 587 YLSLMN 592
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 91/382 (23%), Positives = 160/382 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS---LFNSNE 254
N+I +LN F HL L+ L L ++ + N F L L++ ++ ++
Sbjct: 61 NRIAELNETSFSHLEALEVLILMHQTPGLV-IRRNSFMRLSNLTSLQLDYNHHLRIDAGA 119
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
F KNL TL +D++ + N+ L L SL ++L N I ++ F N+
Sbjct: 120 FNGLSDLKNL-TLTQCGLDDSLLSG--NF-LKPLMSLEMLDLSRNNIRRVQPASFFLNM- 174
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
+R + L+ N ++ I + N + + + LL+ T L +M L + +
Sbjct: 175 RRFHVLDLTFNKVKSICEEDLLNFQGKH-----FTLLRLSSIT----LQDMNEYWLGWEK 225
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN-ITSKQTPMNLNLSNNYITNLYEND 433
+ N + +L + K F + S I S + + N + D
Sbjct: 226 CGNPFKNTSITTLDLSGNGFNVDMAKRFFDAISSTKIQSLIISNTYRIGKSSGDNSKDPD 285
Query: 434 KKQ----APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
K IKS DLSN+ I + + +D L ++ L ++I ++ AF +
Sbjct: 286 KSTFSGLKSSGIKSFDLSNSSIFSLTYSVFSYLSD-LEQITLAESQINKIENNAFLGMTN 344
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L L+L N + + RTF + L+++DLS+N I L + F L LN++ N L
Sbjct: 345 LLKLNLSKNFLGYIDFRTFQNLKGLEVLDLSYNHIWRLGSQSFQGLPNLLSLNLTGNSLG 404
Query: 550 SLPRDVFSNTIIEKLDISYNQD 571
V++ + KL+ Y D
Sbjct: 405 H----VYTFATLPKLEKLYLGD 422
Score = 152 (58.6 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 89/375 (23%), Positives = 169/375 (45%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNK 262
L+GN + L +L+ L LS N ++ ++ ++ F + +L+++F+ S +LN
Sbjct: 141 LSGNFLKPLMSLEMLDLSRNNIRRVQ-PASFFLNMRRFHVLDLTFNKVKSI-CEEDLLNF 198
Query: 263 NLNTLEWLAMDNNNIKNIRNYSL-YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
L + + ++++ Y L + + N + + N F+ ++ KR +
Sbjct: 199 QGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLD-LSGNGFNVDMAKRFFDAI 257
Query: 322 LSNNYLELIESDTFYNLKEL--NTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
S LI S+T+ K N+ + +K++ K+ + LS + I +
Sbjct: 258 SSTKIQSLIISNTYRIGKSSGDNSKDPDKSTFSGLKSSGIKSFD------LSNSSIFSLT 311
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
+ F L +L ++ L ++++ N F +T+ + LNLS N++ + + Q
Sbjct: 312 YSVFSYLSDLEQITLAESQINKIENNAFLGMTNL---LKLNLSKNFLGYI-DFRTFQNLK 367
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ LDLS N I + Q + L L L N + H+ F L LE L L NN
Sbjct: 368 GLEVLDLSYNHIWRLGSQSFQGLPNLL-SLNLTGNSLGHV--YTFATLPKLEKLYLGDNN 424
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF--SF-KLRILNISHNRLRSLPRD-- 554
I V + I +L+ +DL FN+I+ ++ E + F ++ + N+L P+D
Sbjct: 425 IQYVYEIPNIAK-HLKTLDLQFNQIASMS-ELYTILDEFPQIEEVVFRGNQLLYCPQDNH 482
Query: 555 -VFSNTIIEKLDISY 568
V S I + LD+S+
Sbjct: 483 EVLSQNI-QVLDLSF 496
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 83/359 (23%), Positives = 146/359 (40%)
Query: 218 SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKN----LNTLEWLAMD 273
++ +K +I ELN F E L++L + ++ P ++ +N L+ L L +D
Sbjct: 55 NVDLSKNRIAELNETSFSHLEALEVLILM------HQTPGLVIRRNSFMRLSNLTSLQLD 108
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR---LSNNYLELI 330
N+ I + L+ L NL + + ++L N K L + LS N + +
Sbjct: 109 YNHHLRIDAGAFNGLSDLK--NLTLTQCG-LDDSLLSGNFLKPLMSLEMLDLSRNNIRRV 165
Query: 331 ESDTFY-NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI------KYIYP--- 380
+ +F+ N++ + + L++N +KSI N +L + I +Y
Sbjct: 166 QPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEK 225
Query: 381 --NAFVNLPNLVKLDLQDNKLK-DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
N F N ++ LDL N D F I+S + +L +SN Y D +
Sbjct: 226 CGNPFKNT-SITTLDLSGNGFNVDMAKRFFDAISSTKI-QSLIISNTYRIGKSSGDNSKD 283
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P D S F + ++ L + I L + F L LE ++L
Sbjct: 284 P------DKST---------FSGLKSSGIKSFDLSNSSIFSLTYSVFSYLSDLEQITLAE 328
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ I + F+GM NL ++LS N + + F L +L++S+N + L F
Sbjct: 329 SQINKIENNAFLGMTNLLKLNLSKNFLGYIDFRTFQNLKGLEVLDLSYNHIWRLGSQSF 387
Score = 87 (35.7 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIF---NSKLRELEITGKDLKF- 58
+DLS N+++ LN T +S++ L+ L IL Q G+ NS +R +T L +
Sbjct: 56 VDLSKNRIAELN-ETSFSHLEALEVL---ILM-HQTPGLVIRRNSFMRLSNLTSLQLDYN 110
Query: 59 ----IDPSAFDNIDACYDLTLKITNTQIEE-LPSGLFDK-IENIEQMTLDLSHNKLSVLN 112
ID AF+ + +LTL T +++ L SG F K + ++E LDLS N + +
Sbjct: 111 HHLRIDAGAFNGLSDLKNLTL--TQCGLDDSLLSGNFLKPLMSLEM--LDLSRNNIRRVQ 166
Query: 113 MATLYSNVTKLQHLGTTILK 132
A+ + N+ + L T K
Sbjct: 167 PASFFLNMRRFHVLDLTFNK 186
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 296 (109.3 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 94/345 (27%), Positives = 166/345 (48%)
Query: 219 LSFNKLQIIELNSNVFDVFEKLQLLEISFSL---FNSNEFPYYILN--KNLNTLEWLAMD 273
L +N + + +N+++ ++ E L L IS + NE + +NL +L +L++
Sbjct: 51 LPWNAMSLQVVNTHITELPENL-FLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLA 109
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
NN ++ + ++ +L + L N++ +I F+ L+E++L N LE I +
Sbjct: 110 NNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPA--QFSQFSNLRELQLHGNNLESIPEE 167
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
F +L L + L N + F++L N+ + L N++ I F L NL +L
Sbjct: 168 AFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELA 227
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE 453
LQ+N++ + +F N + Q L LSNN+I+ L Q P + L L N ++E
Sbjct: 228 LQENQIGTLSPGLFHNNRNLQ---RLYLSNNHISQLPPGIFMQLP-QLNKLTLFGNSLRE 283
Query: 454 VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
+ + LR+L+L N I L F +L+ L++L L HN + + F G+ N
Sbjct: 284 LSPGVFGPMPN-LRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTN 342
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
L+ + L N + L F L+ +++ NRLR LP +F+N
Sbjct: 343 LRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFAN 387
Score = 275 (101.9 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 94/363 (25%), Positives = 161/363 (44%)
Query: 73 LTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILK 132
++L++ NT I ELP LF I + + L + N+LS + M + N+ L++L K
Sbjct: 56 MSLQVVNTHITELPENLFLNISAL--IALKMEKNELSTI-MPGAFRNLGSLRYLSLANNK 112
Query: 133 DRE------KXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKX 186
R + N++ + F ++ + + + NN E +
Sbjct: 113 LRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFS-NLRELQLHGNNLESIPEEAFDH 171
Query: 187 XXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS 246
N T L+ LF+HL NLQ L L N+L I + + FD LQ L +
Sbjct: 172 LVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGT--FDALGNLQELALQ 229
Query: 247 FSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN 306
+ + + N+NL L + NN+I + L LN + L N + ++
Sbjct: 230 ENQIGTLSPGLFHNNRNLQRLY---LSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSP 286
Query: 307 NLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNML 366
+F L+E+ L NN++ + +TF +L +L + LS+N L I +F L N+
Sbjct: 287 GVF--GPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLR 344
Query: 367 NIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
+ L N ++ + N F +L NL + LQ N+L+ ++F+N+ T + L NN +
Sbjct: 345 ELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTT---IQLQNNNL 401
Query: 427 TNL 429
NL
Sbjct: 402 ENL 404
Score = 255 (94.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 92/361 (25%), Positives = 149/361 (41%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYI 259
IT+L NLF ++ L L + N+L I F L+ L ++ + P +
Sbjct: 65 ITELPENLFLNISALIALKMEKNELSTIM--PGAFRNLGSLRYLSLANNKLRM--LPIRV 120
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
+++N LE L + NN + I+ ++L + L N + I F + L +
Sbjct: 121 F-QDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVG--LTK 177
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N + F +L L + L N L I +F L N+ + L NQI +
Sbjct: 178 LNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLS 237
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
P F N NL +L L +N + +F + L L N + L P
Sbjct: 238 PGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLN---KLTLFGNSLRELSPGVFGPMP- 293
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ L L NN I + N + + L+ L L N++ ++ AF L L LSL N
Sbjct: 294 NLRELWLYNNHITSLADNTF-SHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNA 352
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
+ + F + NLQ I L N + L G F L + + +N L +LP +F +
Sbjct: 353 LQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHL 412
Query: 560 I 560
+
Sbjct: 413 V 413
Score = 249 (92.7 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 106/386 (27%), Positives = 175/386 (45%)
Query: 21 NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNT 80
N LQ + T I + + + S L L++ +L I P AF N+ + L+L N
Sbjct: 54 NAMSLQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSL--ANN 111
Query: 81 QIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL--YSNVTKLQHLGTTILKDREKXX 138
++ LP +F + N+E + L S+N+L + A +SN+ +LQ G + E+
Sbjct: 112 KLRMLPIRVFQDVNNLESLLL--SNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAF 169
Query: 139 XXXXXXXXRC---NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXX 195
N T L+ LF+HL V + + N D
Sbjct: 170 DHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQV-LRLHENRLSDIPMGTFDALGNLQELAL 228
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS-FSLF-NS- 252
+ N+I L+ LF + NLQ L LS N I +L +F +QL +++ +LF NS
Sbjct: 229 QENQIGTLSPGLFHNNRNLQRLYLSNN--HISQLPPGIF-----MQLPQLNKLTLFGNSL 281
Query: 253 NEFPYYILNKNLNTLE-WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
E + N E WL NN+I ++ + + +L L + L +N+++ I F
Sbjct: 282 RELSPGVFGPMPNLRELWLY--NNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAF-- 337
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N L+E+ L N L+ ++S+ F +L L I+L N L+ + + F N+N + I L
Sbjct: 338 NGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQ 397
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDN 397
N ++ + F +L NL +L L DN
Sbjct: 398 NNNLENLPLGIFDHLVNLCELRLYDN 423
Score = 245 (91.3 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 86/364 (23%), Positives = 163/364 (44%)
Query: 151 ITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRH 210
IT+L NLF ++ +++ K N + + NK+ L +F+
Sbjct: 65 ITELPENLFLNIS-ALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQD 123
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
+ NL+ L LS N Q++++ F F L+ L++ + N P + +L L L
Sbjct: 124 VNNLESLLLSNN--QLVQIQPAQFSQFSNLRELQLHGN--NLESIPEEAFD-HLVGLTKL 178
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+ N+ ++ +L +L + L N++S I F + L+E+ L N + +
Sbjct: 179 NLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTF--DALGNLQELALQENQIGTL 236
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
F+N + L + LS N + + F L + + L N ++ + P F +PNL
Sbjct: 237 SPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLR 296
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
+L L +N + N FS++ Q L LS+N +T + ++ L L N
Sbjct: 297 ELWLYNNHITSLADNTFSHLNQLQV---LILSHNQLTYISPG-AFNGLTNLRELSLHTNA 352
Query: 451 IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIG 510
+Q++ N ++ A+ L+ + L N ++ L + F N++ L + L++NN+ + F
Sbjct: 353 LQDLDSNVFRSLAN-LQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDH 411
Query: 511 MPNL 514
+ NL
Sbjct: 412 LVNL 415
Score = 217 (81.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 90/373 (24%), Positives = 172/373 (46%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L++ + + + F NI A + LK+ ++ + G F + ++ L L++NKL
Sbjct: 58 LQVVNTHITELPENLFLNISAL--IALKMEKNELSTIMPGAFRNLGSLRY--LSLANNKL 113
Query: 109 SVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCN-KITDLNGNLFRHLQKS-- 165
+L + ++ +V L+ L +L + + N + L+GN + +
Sbjct: 114 RMLPIR-VFQDVNNLESL---LLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAF 169
Query: 166 --IVKAKKNN--NNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLS 220
+V K N N+ +S R + N+++D+ F L NLQEL+L
Sbjct: 170 DHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQ 229
Query: 221 FNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
N QI L+ +F LQ L +S + + ++ P I + L L L + N+++ +
Sbjct: 230 EN--QIGTLSPGLFHNNRNLQRLYLSNN--HISQLPPGIFMQ-LPQLNKLTLFGNSLREL 284
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLF-HFNIHKRLKEIRLSNNYLELIESDTFYNLK 339
+ +L + L N I+ + +N F H N +L+ + LS+N L I F L
Sbjct: 285 SPGVFGPMPNLRELWLYNNHITSLADNTFSHLN---QLQVLILSHNQLTYISPGAFNGLT 341
Query: 340 ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
L ++L N L+ + + F++L N+ NI L N+++ + + F N+ L + LQ+N L
Sbjct: 342 NLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNL 401
Query: 400 KDFNLNVFSNITS 412
++ L +F ++ +
Sbjct: 402 ENLPLGIFDHLVN 414
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
SL + N I E+P N + +L L ++ NE+ + AF NL L LSL +N + +
Sbjct: 57 SLQVVNTHITELPENLFLNIS-ALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRM 115
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-I 561
+ R F + NL+ + LS N++ + QF LR L + N L S+P + F + + +
Sbjct: 116 LPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGL 175
Query: 562 EKLDISYN 569
KL++ N
Sbjct: 176 TKLNLGRN 183
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 295 (108.9 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 87/297 (29%), Positives = 142/297 (47%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+NL++L +L + + ++ +L L +L +++LE N++ + F L +
Sbjct: 95 QNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHT--PALASLG 152
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LSNN L +E F L L + L +N L + +F+ L ++ +VL+ N++ Y+ P
Sbjct: 153 LSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPA 212
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F L L +LDL N L+ NVF + Q L L N I + +
Sbjct: 213 LFSGLAELRELDLSRNALRAIKANVFVQLPRLQ---KLYLDRNLIAAVAPGAFLGLKA-L 268
Query: 442 KSLDLSNNRIQEVPVNFLQTFAD--SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ LDLS+NR+ + TF LR L L N I L F +L LE L L HN
Sbjct: 269 RWLDLSHNRVAGL---LEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNR 325
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
I + +R+F G+ L+++ L N++ + F + ++N+S N LR+LP VF
Sbjct: 326 IRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVF 382
Score = 256 (95.2 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 97/364 (26%), Positives = 171/364 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+++ L LF L +L +L+L +N L + L F L+ L ++ N Y
Sbjct: 156 NRLSRLEDGLFEGLGSLWDLNLGWNSLAV--LPDAAFRGLGSLRELVLA-----GNRLAY 208
Query: 258 Y--ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
L L L L + N ++ I+ L L + L+ N I+ + F + K
Sbjct: 209 LQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAF-LGL-K 266
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+ + LS+N + + DTF L L + LS+N + S++ +FK+L+ + + L N+I
Sbjct: 267 ALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRI 326
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + +F L L L L N+L++ F +T+ +NLS N + NL E +
Sbjct: 327 RQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAV---MNLSGNCLRNLPEQVFR 383
Query: 436 QAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELL 493
+ SL L + + + P F T LR+L+L N + ++ + +G ++LEL
Sbjct: 384 GLG-KLHSLHLEGSCLGRIRPHTF--TGLSGLRRLFLKDNGLVGIEEQSLWGLAELLEL- 439
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + R F G+ L+ + LS N ++ L + + L++SHNRL +LP
Sbjct: 440 DLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPN 499
Query: 554 DVFS 557
+ +
Sbjct: 500 SLLA 503
Score = 251 (93.4 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 85/331 (25%), Positives = 148/331 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N++ L LF L L+EL LS N L+ I+ +NVF +LQ L + +L + P
Sbjct: 204 NRLAYLQPALFSGLAELRELDLSRNALRAIK--ANVFVQLPRLQKLYLDRNLIAAVA-PG 260
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L L L WL + +N + + + L L + L +N I+ + F ++H L
Sbjct: 261 AFLG--LKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFK-DLHF-L 316
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+E++L +N + + +F L +L +TL +N L+ +K +F L N+ + LS N ++
Sbjct: 317 EELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRN 376
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ F L L L L+ + L + F+ ++ + L L +N + + E
Sbjct: 377 LPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLR---RLFLKDNGLVGI-EEQSLWG 432
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+ LDL++N++ +P Q L L L N + L A A G L L + H
Sbjct: 433 LAELLELDLTSNQLTHLPHRLFQGLG-KLEYLLLSRNRLAELPADALGPLQRAFWLDVSH 491
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLT 528
N + + + L+ + L N + T
Sbjct: 492 NRLEALPNSLLAPLGRLRYLSLRNNSLRTFT 522
Score = 239 (89.2 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 85/303 (28%), Positives = 140/303 (46%)
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
WL D NN+ ++ + NL+SL ++NL+ ++ + + + L + L N L
Sbjct: 80 WL--DGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQAL-LGL-ENLCHLHLERNQLR 135
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ TF + L ++ LS N L ++ F+ L ++ ++ L +N + + AF L +
Sbjct: 136 SLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGS 195
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L +L L N+L +FS + + L+LS N + + N Q P ++ L L
Sbjct: 196 LRELVLAGNRLAYLQPALFSGLAELR---ELDLSRNALRAIKANVFVQLP-RLQKLYLDR 251
Query: 449 NRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
N I V P FL A LR L L N + L F L L +L L HN IA + RT
Sbjct: 252 NLIAAVAPGAFLGLKA--LRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRT 309
Query: 508 FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDI 566
F + L+ + L N I L F +L +L + HN+L+ + F T + +++
Sbjct: 310 FKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNL 369
Query: 567 SYN 569
S N
Sbjct: 370 SGN 372
Score = 230 (86.0 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 83/353 (23%), Positives = 165/353 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L FR L +L+EL L+ N+L ++ +F +L+ L++S + + +
Sbjct: 180 NSLAVLPDAAFRGLGSLRELVLAGNRLAYLQ--PALFSGLAELRELDLSRNALRAIKANV 237
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++ L L+ L +D N I + + L +L +++L +N+++ + + F + R+
Sbjct: 238 FV---QLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRV 294
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+RLS+N + + TF +L L + L +N ++ + SF+ L + + L NQ++
Sbjct: 295 --LRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQE 352
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ AF+ L N+ ++L N L++ VF + + L+L + + + +
Sbjct: 353 VKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHS---LHLEGSCLGRIRPHTFTGL 409
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ L L +N + + L A+ L +L L N++ HL F L LE L L
Sbjct: 410 S-GLRRLFLKDNGLVGIEEQSLWGLAELL-ELDLTSNQLTHLPHRLFQGLGKLEYLLLSR 467
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
N +A + + +D+S N + L +LR L++ +N LR+
Sbjct: 468 NRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRT 520
Score = 226 (84.6 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 90/381 (23%), Positives = 165/381 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N++ L F H L L LS N+L +E +F+ L L + + NS
Sbjct: 132 NQLRSLALGTFAHTPALASLGLSNNRLSRLE--DGLFEGLGSLWDLNLGW---NSLAVLP 186
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L +L L + N + ++ L L ++L N + I N+F + RL
Sbjct: 187 DAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVF-VQL-PRL 244
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+++ L N + + F LK L + LS+N + + +F L + + LS N I
Sbjct: 245 QKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIAS 304
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ P F +L L +L L N+++ F + + L L +N + + +
Sbjct: 305 LRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEV---LTLDHNQLQEV-KAGAFLG 360
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+ ++LS N ++ +P + L L+L+ + + + F L L L L+
Sbjct: 361 LTNVAVMNLSGNCLRNLPEQVFRGLG-KLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKD 419
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N + + +++ G+ L +DL+ N+++ L F KL L +S NRL LP D
Sbjct: 420 NGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALG 479
Query: 558 NTIIEK---LDISYNQDKIRP 575
+++ LD+S+N+ + P
Sbjct: 480 P--LQRAFWLDVSHNRLEALP 498
Score = 215 (80.7 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 80/284 (28%), Positives = 130/284 (45%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L+ N +S + F N+ L + L L +E L+ L + L N L+S+
Sbjct: 81 LDGNNLSSVPPAAFQ-NLSS-LGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLA 138
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT 415
+F + + ++ LS N++ + F L +L L+L N L F + S +
Sbjct: 139 LGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLR- 197
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFN 474
L L+ N + L + ++ LDLS N ++ + N F+Q L+KLYLD N
Sbjct: 198 --ELVLAGNRLAYL-QPALFSGLAELRELDLSRNALRAIKANVFVQL--PRLQKLYLDRN 252
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
I + AF L L L L HN +A +++ TF G+ L+++ LS N I+ L F
Sbjct: 253 LIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKD 312
Query: 535 SFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYNQ-DKIRPG 576
L L + HNR+R L F +E L + +NQ +++ G
Sbjct: 313 LHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAG 356
Score = 157 (60.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 91/407 (22%), Positives = 172/407 (42%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ--HLG---TTILKGDQLQGIFNSKLRELEITGKDL 56
+L LS+N+LS L L+ + L +LG +L +G+ LREL + G L
Sbjct: 150 SLGLSNNRLSRLEDG-LFEGLGSLWDLNLGWNSLAVLPDAAFRGL--GSLRELVLAGNRL 206
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS-VLNMAT 115
++ P+ F + +L L + + + + +F ++ ++++ LD N ++ V A
Sbjct: 207 AYLQPALFSGLAELRELDL--SRNALRAIKANVFVQLPRLQKLYLD--RNLIAAVAPGAF 262
Query: 116 LYSNVTK---LQHLGTT-ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKK 171
L + L H +L+D N I L F+ L ++ +
Sbjct: 263 LGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLH--FLEELQ 320
Query: 172 NNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELN 230
+N Q+++R + N++ ++ F L N+ ++LS N L+ L
Sbjct: 321 LGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLR--NLP 378
Query: 231 SNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS 290
VF KL L + S P+ L+ L L + +N + I SL+ L
Sbjct: 379 EQVFRGLGKLHSLHLEGSCLGRIR-PHTFTG--LSGLRRLFLKDNGLVGIEEQSLWGLAE 435
Query: 291 LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNL 350
L ++L N+++ + + LF + K L+ + LS N L + +D L+ + +S+N
Sbjct: 436 LLELDLTSNQLTHLPHRLFQ-GLGK-LEYLLLSRNRLAELPADALGPLQRAFWLDVSHNR 493
Query: 351 LKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L+++ + L + + L N ++ P P L +L L+ N
Sbjct: 494 LEALPNSLLAPLGRLRYLSLRNNSLRTFTPQP----PGLERLWLEGN 536
Score = 65 (27.9 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 3 LDLSHNKLSVLNMATLYS--NVTKLQHLGTTILKGDQLQGIF--NSKLRELEITGKDLKF 58
L+L +L L L N+ L HL L+ L G F L L ++ L
Sbjct: 103 LNLQGGQLGSLEPQALLGLENLCHL-HLERNQLRSLAL-GTFAHTPALASLGLSNNRLSR 160
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
++ F+ + + +DL L + + LP F + ++ ++ L + N+L+ L A L+S
Sbjct: 161 LEDGLFEGLGSLWDLNLGWNSLAV--LPDAAFRGLGSLRELVL--AGNRLAYLQPA-LFS 215
Query: 119 NVTKLQHL 126
+ +L+ L
Sbjct: 216 GLAELREL 223
Score = 61 (26.5 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEEL-PSGLFDKIENIEQMTLDLSHNK 107
L + G +L + P+AF N+ + L L+ Q+ L P L +EN+ L L N+
Sbjct: 79 LWLDGNNLSSVPPAAFQNLSSLGFLNLQ--GGQLGSLEPQALLG-LENL--CHLHLERNQ 133
Query: 108 LSVLNMATLYSNVTKLQHLG 127
L L + T +++ L LG
Sbjct: 134 LRSLALGT-FAHTPALASLG 152
>UNIPROTKB|O15455 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9606 "Homo
sapiens" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=NAS] [GO:0016020 "membrane" evidence=NAS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=NAS] [GO:0006972 "hyperosmotic response" evidence=NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IDA;NAS]
[GO:0045671 "negative regulation of osteoclast differentiation"
evidence=NAS] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IDA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IDA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IMP;IDA] [GO:0009597 "detection of virus"
evidence=NAS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEP] [GO:0042742 "defense response to bacterium"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0008063 "Toll signaling pathway"
evidence=TAS] [GO:0010008 "endosome membrane" evidence=TAS]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS]
[GO:0035666 "TRIF-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0036020 "endolysosome membrane" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0032728
"positive regulation of interferon-beta production" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IDA] [GO:0032722
"positive regulation of chemokine production" evidence=IDA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IDA] [GO:0034123
"positive regulation of toll-like receptor signaling pathway"
evidence=IDA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IDA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IC] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 Reactome:REACT_6900 GO:GO:0000139
GO:GO:0005887 GO:GO:0005789 GO:GO:0043123 GO:GO:0042742
GO:GO:0006954 GO:GO:0046330 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0050729
GO:GO:0051607 GO:GO:0006972 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 EMBL:CH471056 GO:GO:0003725 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0007250 GO:GO:0004888
GO:GO:0032760 GO:GO:0008063 GO:GO:0034138 GO:GO:0034142
GO:GO:0035666 GO:GO:0052033 GO:GO:0045671 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0002282 GO:GO:0032728
GO:GO:0009597 GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200
GO:GO:0071360 GO:GO:0045359 Orphanet:1930 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 EMBL:U88879 EMBL:DQ445682 EMBL:AB445631
EMBL:BC096333 EMBL:BC096334 EMBL:BC096335 IPI:IPI00019007
RefSeq:NP_003256.1 UniGene:Hs.657724 PDB:1ZIW PDB:2A0Z PDB:3ULU
PDB:3ULV PDBsum:1ZIW PDBsum:2A0Z PDBsum:3ULU PDBsum:3ULV
ProteinModelPortal:O15455 SMR:O15455 DIP:DIP-29660N IntAct:O15455
MINT:MINT-2840066 STRING:O15455 PhosphoSite:O15455 PaxDb:O15455
PRIDE:O15455 Ensembl:ENST00000296795 GeneID:7098 KEGG:hsa:7098
UCSC:uc003iyq.3 GeneCards:GC04P186990 HGNC:HGNC:11849 HPA:CAB025658
MIM:603029 MIM:613002 neXtProt:NX_O15455 PharmGKB:PA36551
HOGENOM:HOG000251618 InParanoid:O15455 OMA:IANINDD PhylomeDB:O15455
ChEMBL:CHEMBL1075113 EvolutionaryTrace:O15455 GenomeRNAi:7098
NextBio:27769 ArrayExpress:O15455 Bgee:O15455 CleanEx:HS_TLR3
Genevestigator:O15455 GermOnline:ENSG00000164342 GO:GO:0036020
GO:GO:0045356 GO:GO:0034346 Uniprot:O15455
Length = 904
Score = 231 (86.4 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 100/381 (26%), Positives = 174/381 (45%)
Query: 213 NLQELSLSFNKLQIIELNSNV--------FDVFEKLQLLEISFSLFNSNEFPYYILNKNL 264
NL L LS+N L ++ +S F + +Q L S SL Y L ++
Sbjct: 275 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL-FSHSLHGLFNVRYLNLKRSF 333
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
T + +++ + + I ++S L L ++N+E N I I +N+F I+ LK + LSN
Sbjct: 334 -TKQSISLAS--LPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLIN--LKYLSLSN 388
Query: 325 NYLEL--IESDTFYNLKE--LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI-KYIY 379
++ L + ++TF +L L+ + L+ N + I++ +F L ++ + L N+I + +
Sbjct: 389 SFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 448
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
+ L N+ ++ L NK N F+ + S Q L L + N+ + P+
Sbjct: 449 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQ---RLMLRRVALKNVDSSPSPFQPL 505
Query: 440 Y-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL--DATAFG------NLDVL 490
+ LDLSNN I + + L+ + L L L N + L A G L L
Sbjct: 506 RNLTILDLSNNNIANINDDMLEGL-EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHL 564
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
+L+LE N + F + L+IIDL N ++ L F L+ LN+ N + S
Sbjct: 565 HILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS 624
Query: 551 LPRDVFSNTI--IEKLDISYN 569
+ + VF + +LD+ +N
Sbjct: 625 VEKKVFGPAFRNLTELDMRFN 645
Score = 218 (81.8 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 125/508 (24%), Positives = 218/508 (42%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS----NVTKLQHLGTTI 130
L +T+ Q+ LP+ F + + +LD+ N +S L V LQH +
Sbjct: 56 LNLTHNQLRRLPAANFTRYSQLT--SLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQ 113
Query: 131 LKDREKXX-XXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXX 189
L D+ N I + N F QK+++ ++N +
Sbjct: 114 LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVK-QKNLITLDLSHNGLSSTKLGTQVQLEN 172
Query: 190 XXXXXXRCNKITDLNG---NLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS 246
NKI L ++F + +L++L LS N QI E + F +L
Sbjct: 173 LQELLLSNNKIQALKSEELDIFANS-SLKKLELSSN--QIKEFSPGCFHAIGRL------ 223
Query: 247 FSLFNSNEFPYYILNKNL-----NT-LEWLAMDNNNIKNIRNYSLYNL--TSLNYINLEY 298
F LF +N L + L NT + L++ N+ + N + L T+L ++L Y
Sbjct: 224 FGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSY 283
Query: 299 NKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF---YNLKELN---TIT---LSYN 349
N ++ + N+ F + +L+ L N ++ + S + +N++ LN + T +S
Sbjct: 284 NNLNVVGNDSFAWL--PQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 341
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN--KLKDFNLNVF 407
L I SF+ L + ++ + N I I N F L NL L L ++ L+ F
Sbjct: 342 SLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETF 401
Query: 408 SNITSKQTPMN-LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI-QEVPVNFLQTFADS 465
++ +P++ LNL+ N I+ + E+D +++ LDL N I QE+ + ++
Sbjct: 402 VSLA--HSPLHILNLTKNKISKI-ESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL-EN 457
Query: 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT--FIGMPNLQIIDLSFNE 523
+ ++YL +N+ L +F + L+ L L + V F + NL I+DLS N
Sbjct: 458 IFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNN 517
Query: 524 ISMLTGEQFYFSFKLRILNISHNRLRSL 551
I+ + + KL IL++ HN L L
Sbjct: 518 IANINDDMLEGLEKLEILDLQHNNLARL 545
Score = 205 (77.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 125/515 (24%), Positives = 225/515 (43%)
Query: 101 LDLSHNKLSVLNMA--TLYSNVTKLQHLGTTILK-DRE--KXXXXXXXXXXRCNKITDLN 155
L+L+HN+L L A T YS +T L TI K + E + + N+++ L+
Sbjct: 56 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 115
Query: 156 GNLFR--------HLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNL 207
F HL + ++ KNN V + K+ G
Sbjct: 116 DKTFAFCTNLTELHLMSNSIQKIKNN----PFVKQKNLITLDLSHNGLSSTKL----GTQ 167
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
+ L NLQEL LS NK+Q L S D+F L ++ S EF + + L
Sbjct: 168 VQ-LENLQELLLSNNKIQA--LKSEELDIFANSSLKKLELSSNQIKEFSPGCFHA-IGRL 223
Query: 268 EWLAMDNNNI-KNIRNYSLYNL--TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
L ++N + ++ L TS+ ++L +++S N F L + LS
Sbjct: 224 FGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSY 283
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM--LNIVLSFNQ-------I 375
N L ++ +D+F L +L L YN ++ + + S L N+ LN+ SF + +
Sbjct: 284 NNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASL 343
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY-----ITNLY 430
I +F L L L+++DN + N+F+ + + + L+LSN++ +TN
Sbjct: 344 PKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKY---LSLSNSFTSLRTLTNET 400
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI-KHLDATAFGNLDV 489
+P++I L+L+ N+I ++ + ++ L L L NEI + L + L+
Sbjct: 401 FVSLAHSPLHI--LNLTKNKISKIESDAF-SWLGHLEVLDLGLNEIGQELTGQEWRGLEN 457
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS--FKLRILNISHNR 547
+ + L +N + + +F +P+LQ + L + + F L IL++S+N
Sbjct: 458 IFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNN 517
Query: 548 LRSLPRDVFSNTI-IEKLDISYNQDKIRPGRESNP 581
+ ++ D+ +E LD+ +N + R + +NP
Sbjct: 518 IANINDDMLEGLEKLEILDLQHN-NLARLWKHANP 551
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 72/287 (25%), Positives = 134/287 (46%)
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
T++ +NL +N++ ++ +F + +L + + N + +E + L L + L +
Sbjct: 51 TNITVLNLTHNQLRRLP--AANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 108
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L + +F N+ + L N I+ I N FV NL+ LDL N L L
Sbjct: 109 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQV 168
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQ-APIYIKSLDLSNNRIQEV-PVNFL---QTFA 463
+ + Q L LSNN I L + A +K L+LS+N+I+E P F + F
Sbjct: 169 QLENLQ---ELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFG 225
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP--NLQIIDLSF 521
L + L + + L N + L SL ++ ++ TF+G+ NL ++DLS+
Sbjct: 226 LFLNNVQLGPSLTEKL-CLELANTSIRNL-SLSNSQLSTTSNTTFLGLKWTNLTMLDLSY 283
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISY 568
N ++++ + F + +L + +N ++ L FS+++ ++ Y
Sbjct: 284 NNLNVVGNDSFAWLPQLEYFFLEYNNIQHL----FSHSLHGLFNVRY 326
Score = 191 (72.3 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 93/377 (24%), Positives = 174/377 (46%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N+ L+L+ N+L+ L + F + +L L++ F+ + E P L + L L+ L +
Sbjct: 52 NITVLNLTHNQLR--RLPAANFTRYSQLTSLDVGFNTISKLE-PE--LCQKLPMLKVLNL 106
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N + + + + T+L ++L N I KI NN F K L + LS+N L +
Sbjct: 107 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNN--PFVKQKNLITLDLSHNGLSSTKL 164
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTS---FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
T L+ L + LS N ++++K+ F N +++ + LS NQIK P F + L
Sbjct: 165 GTQVQLENLQELLLSNNKIQALKSEELDIFAN-SSLKKLELSSNQIKEFSPGCFHAIGRL 223
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP-IYIKSLDLSN 448
L L + +L + + NL+LSN+ ++ + LDLS
Sbjct: 224 FGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSY 283
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN------NIAV 502
N + V N + L +L++N I+HL + + L + L+L+ + ++A
Sbjct: 284 NNLNVVG-NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLAS 342
Query: 503 VVKR---TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN--RLRSLPRDVFS 557
+ K +F + L+ +++ N+I + F L+ L++S++ LR+L + F
Sbjct: 343 LPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFV 402
Query: 558 NTIIEKLDI-SYNQDKI 573
+ L I + ++KI
Sbjct: 403 SLAHSPLHILNLTKNKI 419
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 54/181 (29%), Positives = 86/181 (47%)
Query: 408 SNITSKQTPMNLNLSNNYITNLYENDKKQAPI-----Y--IKSLDLSNNRIQEVPVNFLQ 460
S++ Q P +L +N + NL N ++ P Y + SLD+ N I ++ Q
Sbjct: 38 SHLKLTQVPDDLP-TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQ 96
Query: 461 TFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLS 520
L+ L L NE+ L F L L L N+I + F+ NL +DLS
Sbjct: 97 KLP-MLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 155
Query: 521 FNEISMLT-GEQFYFSFKLRILNISHNRLRSLPR---DVFSNTIIEKLDISYNQDK-IRP 575
N +S G Q L+ L +S+N++++L D+F+N+ ++KL++S NQ K P
Sbjct: 156 HNGLSSTKLGTQVQLE-NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 214
Query: 576 G 576
G
Sbjct: 215 G 215
Score = 116 (45.9 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 41/132 (31%), Positives = 63/132 (47%)
Query: 1 MTLDLSHNKLSVLNMATLYS--NVTKLQHLGTTI--LKGDQLQGIFNSKLRELEITGKDL 56
+TLDLSHN LS + T N+ +L I LK ++L NS L++LE++ +
Sbjct: 150 ITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 209
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQI-EELPSGLFDKIENIEQMTLDLSHNKLSVLNMAT 115
K P F I + L L N Q+ L L ++ N L LS+++LS + T
Sbjct: 210 KEFSPGCFHAIGRLFGLFLN--NVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 267
Query: 116 L----YSNVTKL 123
++N+T L
Sbjct: 268 FLGLKWTNLTML 279
Score = 70 (29.7 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 28/108 (25%), Positives = 49/108 (45%)
Query: 3 LDLSHNKLSVLNMATLY--SNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
L+L HN+LS L+ T +N+T+L + +I K + L L+++ L
Sbjct: 104 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTK 163
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
++ +L L +N +I+ L S D N L+LS N++
Sbjct: 164 LGTQVQLENLQELLL--SNNKIQALKSEELDIFANSSLKKLELSSNQI 209
Score = 52 (23.4 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 29/117 (24%), Positives = 57/117 (48%)
Query: 5 LSHNKLSVLNMATL----YSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
LS+NK+ L L S++ KL+ L + +K + G F++ R + +++ +
Sbjct: 178 LSNNKIQALKSEELDIFANSSLKKLE-LSSNQIK-EFSPGCFHAIGRLFGLFLNNVQ-LG 234
Query: 61 PSAFDNIDACYDLT------LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
PS + + C +L L ++N+Q+ + F ++ LDLS+N L+V+
Sbjct: 235 PSLTEKL--CLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 289
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 286 (105.7 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 85/279 (30%), Positives = 142/279 (50%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
YINL N+I + F + +L+ + LS N +E + S F EL T+ LS NL+
Sbjct: 77 YINLTVNRIRTLE---FSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVS 133
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
S+ +FK L N+L + LSFN+I+ ++P A +L +LV+LDL +N + N F + +
Sbjct: 134 SLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNT 193
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
+ L NN + ++ ++ +KSLD+S N ++ V + + + L L +
Sbjct: 194 LEV---LVFRNNRLLDVPASNLWHLHA-LKSLDMSLNLVEFVRNDSFEGLKELLA-LSVQ 248
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N + LD +AF L L+ L L NN+ +V + + NL ++L N S L F
Sbjct: 249 GNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAF 308
Query: 533 YFSFKLRILNISH-NRLRSLPRDVF-SNTIIEKLDISYN 569
F LR L++S + L+ + F NT ++ L ++ N
Sbjct: 309 LNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNN 347
Score = 260 (96.6 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 78/336 (23%), Positives = 170/336 (50%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
++L+ N+++ +E + + KL++L++S ++ + + L TL + N
Sbjct: 78 INLTVNRIRTLEFS---LPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLN---LSRNL 131
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
+ ++ ++ LT+L ++L +N+I +H ++ L E+ L+NN + +E + F
Sbjct: 132 VSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALS-DLAS-LVELDLTNNNIVSLEDNCFK 189
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
+ L + N L + ++ +L+ + ++ +S N ++++ ++F L L+ L +Q
Sbjct: 190 GMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQG 249
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP- 455
N + + +L+ F + S + +L+LS+N +T + + + L+L NR ++P
Sbjct: 250 NVMSELDLSAFEGLISLK---HLDLSDNNLT-MVPTQQLSKLSNLTYLNLGGNRFSQLPA 305
Query: 456 VNFLQTFADSLRKLYLD-FNEIKHLDATAFGNLDVLELLSLEHN-NIAVVVKRTFIGMPN 513
V FL F LR+L+L + ++ +D+ AF + L+ L L +N ++ + R F G PN
Sbjct: 306 VAFLNLF--HLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPN 363
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
+ + + N + L QF +L+ L + N L+
Sbjct: 364 ILEVYMQSNSLQTLYSAQFPVD-QLQKLYLGDNPLQ 398
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/287 (25%), Positives = 137/287 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELN--SNVFDVFEKLQLLEISFSLFNSNEF 255
N ++ L+ + F+ L NL L LSFN+++ + S++ + E L L + N F
Sbjct: 130 NLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVE-LDLTNNNIVSLEDNCF 188
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
K +NTLE L NN + ++ +L++L +L +++ N + + N+ F + K
Sbjct: 189 ------KGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFE-GL-K 240
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L + + N + ++ F L L + LS N L + T L+N+ + L N+
Sbjct: 241 ELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRF 300
Query: 376 KYIYPNAFVNLPNLVKLDLQD-NKLKDFNLNVFSNITSKQTPMNLNLSNNYITN----LY 430
+ AF+NL +L +L L + L+ + F + T QT ++LN +N +++ L+
Sbjct: 301 SQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQT-LHLN-NNPQLSDIPMRLF 358
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
+ + +Y++S L + PV D L+KLYL N ++
Sbjct: 359 QGNPNILEVYMQSNSLQTLYSAQFPV-------DQLQKLYLGDNPLQ 398
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 74/307 (24%), Positives = 138/307 (44%)
Query: 101 LDLSHNKLSVLNMATL-YSNVTKLQHLGTTIL----KDREKXXXXXXXXXXRCNKITDLN 155
LDLS N + L Y + + +L ++ K K N+I ++
Sbjct: 101 LDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVH 160
Query: 156 GNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQ 215
L S+V+ NNN + K R N++ D+ + HL+ L+
Sbjct: 161 PTALSDLA-SLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALK 219
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
L +S N ++ + +S F+ ++L L + ++ + + + + L +L+ L + +N
Sbjct: 220 SLDMSLNLVEFVRNDS--FEGLKELLALSVQGNVMSELDLSAF---EGLISLKHLDLSDN 274
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN-NYLELIESDT 334
N+ + L L++L Y+NL N+ S++ F N+ L+E+ LS ++L+ I+S
Sbjct: 275 NLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAF-LNLF-HLRELHLSRLDFLQRIDSRA 332
Query: 335 FYNLKELNTITLSYN-LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
F + L T+ L+ N L I F+ N+L + + N ++ +Y F + L KL
Sbjct: 333 FVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFP-VDQLQKLY 391
Query: 394 LQDNKLK 400
L DN L+
Sbjct: 392 LGDNPLQ 398
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 265 (98.3 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 78/294 (26%), Positives = 150/294 (51%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF-HFNIHKRLKEIRL 322
L L+ L + + + N+ + NL+SL + L++++++ + +LF H +I L+ ++L
Sbjct: 96 LPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDI---LESLQL 152
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
N L + F +L++L T+ L+ NLL + +F++L + + LS N + + A
Sbjct: 153 QGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGA 212
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
+L +L +L L N + + + ++FS + S + L L +N I +L + +
Sbjct: 213 LGSLSSLQELFLDGNAITELSPHLFSQLFSLEM---LWLQHNAICHLPVSLFSSLH-NLT 268
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L L +N ++ +P L L L L +N+++ + AF NL L L+L HN I
Sbjct: 269 FLSLKDNALRTLPEG-LFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITD 327
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ + F + L + L N ++ L F+ +L++LN+S N+L +LP +F
Sbjct: 328 LPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLPGGIF 381
Score = 247 (92.0 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 71/260 (27%), Positives = 131/260 (50%)
Query: 311 FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
F+ L ++ N + +E D F L L + ++ + + ++ F NL+++ + L
Sbjct: 69 FSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTL 128
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
F+++ + + F ++ L L LQ N+L+ +F ++ +T LNL+ N +T L
Sbjct: 129 DFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRT---LNLAQNLLTQLP 185
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
+ Q+ ++ L LSNN + +P L + + SL++L+LD N I L F L L
Sbjct: 186 KG-AFQSLTGLQMLKLSNNMLARLPEGALGSLS-SLQELFLDGNAITELSPHLFSQLFSL 243
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
E+L L+HN I + F + NL + L N + L F + L L++S+N+L +
Sbjct: 244 EMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLET 303
Query: 551 LPRDVFSN-TIIEKLDISYN 569
+P F+N + + L +S+N
Sbjct: 304 IPEGAFTNLSRLVSLTLSHN 323
Score = 238 (88.8 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 73/232 (31%), Positives = 122/232 (52%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N++ L G LF+ L +L+ L+L+ N L +L F LQ+L++S ++ P
Sbjct: 155 NQLRTLPGRLFQSLRDLRTLNLAQNLLT--QLPKGAFQSLTGLQMLKLSNNMLA--RLPE 210
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L +L++L+ L +D N I + + L SL + L++N I + +LF ++H L
Sbjct: 211 GALG-SLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFS-SLHN-L 267
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L +N L + F + + L ++LSYN L++I +F NL+ ++++ LS N I
Sbjct: 268 TFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITD 327
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+ + F NL LVKL L N L + +F N++ Q LNLS N +T L
Sbjct: 328 LPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQL---LNLSRNQLTTL 376
Score = 237 (88.5 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 89/326 (27%), Positives = 156/326 (47%)
Query: 221 FNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
F Q+ L + F +LQ LEI+ S SN +I + NL++LE L +D + + +
Sbjct: 80 FLNTQVRHLEPDAFGGLPRLQDLEITGSPV-SN-LSAHIFS-NLSSLEKLTLDFDRLAGL 136
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE 340
++ L + L+ N++ + LF ++ + L+ + L+ N L + F +L
Sbjct: 137 PEDLFCHMDILESLQLQGNQLRTLPGRLFQ-SL-RDLRTLNLAQNLLTQLPKGAFQSLTG 194
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
L + LS N+L + + +L+++ + L N I + P+ F L +L L LQ N +
Sbjct: 195 LQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAIC 254
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITNLYEN--DKKQAPIYIKSLDLSNNRIQEVPVNF 458
+++FS++ + L+L +N + L E Q ++ L LS N+++ +P
Sbjct: 255 HLPVSLFSSLHNLTF---LSLKDNALRTLPEGLFAHNQGLLH---LSLSYNQLETIPEGA 308
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
T L L L N I L F NL+ L LSL+ NN+ + F + LQ+++
Sbjct: 309 F-TNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLN 367
Query: 519 LSFNEISMLTGEQF---YFSFKLRIL 541
LS N+++ L G F Y F L +L
Sbjct: 368 LSRNQLTTLPGGIFDTNYDLFNLALL 393
Score = 234 (87.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 79/285 (27%), Positives = 131/285 (45%)
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL 346
NLT + ++N + H F RL+++ ++ + + + + F NL L +TL
Sbjct: 74 NLTKVVFLNTQVR-----HLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTL 128
Query: 347 SYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
++ L + F +++ + ++ L NQ++ + F +L +L L+L N L
Sbjct: 129 DFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGA 188
Query: 407 FSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADS 465
F ++T Q L LSNN + L E ++ L L N I E+ P F Q F S
Sbjct: 189 FQSLTGLQM---LKLSNNMLARLPEGALGSLSS-LQELFLDGNAITELSPHLFSQLF--S 242
Query: 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
L L+L N I HL + F +L L LSL+ N + + + F L + LS+N++
Sbjct: 243 LEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLE 302
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ F +L L +SHN + LP VF N + KL + N
Sbjct: 303 TIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSN 347
Score = 212 (79.7 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 63/241 (26%), Positives = 123/241 (51%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+E+ S+ L I D ++ ++ + ++ +++T +F N+ +V Q+++
Sbjct: 31 REVFCSDEQLADIPPDIPPHITDIVFVETAFT---TVRTRAFSGSPNLTKVVFLNTQVRH 87
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ P+AF LP L L++ + + + + ++FSN++S + L L + + L E+
Sbjct: 88 LEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLE---KLTLDFDRLAGLPEDLFCHM 144
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
I ++SL L N+++ +P Q+ D LR L L N + L AF +L L++L L +
Sbjct: 145 DI-LESLQLQGNQLRTLPGRLFQSLRD-LRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSN 202
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N +A + + + +LQ + L N I+ L+ F F L +L + HN + LP +FS
Sbjct: 203 NMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFS 262
Query: 558 N 558
+
Sbjct: 263 S 263
Score = 194 (73.4 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 85/295 (28%), Positives = 130/295 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T L F+ L LQ L LS N L L LQ L + + P+
Sbjct: 179 NLLTQLPKGAFQSLTGLQMLKLSNNMLA--RLPEGALGSLSSLQELFLDGNAITELS-PH 235
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L L +LE L + +N I ++ SL++ L +L +++L+ N + + LF N +
Sbjct: 236 --LFSQLFSLEMLWLQHNAICHLP-VSLFSSLHNLTFLSLKDNALRTLPEGLFAHN--QG 290
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L + LS N LE I F NL L ++TLS+N + + F+NL ++ + L N +
Sbjct: 291 LLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLT 350
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLK-------DFNLNVFSNITSKQTPMNLNLSNNYITN- 428
++P F NL L L+L N+L D N ++F N+ P + +Y+T+
Sbjct: 351 ALHPALFHNLSRLQLLNLSRNQLTTLPGGIFDTNYDLF-NLALLGNPWQCDCHLSYLTSW 409
Query: 429 --LYENDKKQA------PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
LY N P Y+K L N QE + + S R L LD E
Sbjct: 410 LRLYNNQISNTHTFCAGPAYLKG-QLVPNLKQEQLICPVNPGHLSFRALGLDEGE 463
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 76/334 (22%), Positives = 143/334 (42%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L ++ ++ ++P AF + DL +IT + + L + +F + ++E++TLD
Sbjct: 75 LTKVVFLNTQVRHLEPDAFGGLPRLQDL--EITGSPVSNLSAHIFSNLSSLEKLTLDF-- 130
Query: 106 NKLSVLNMATLYSNVTKLQHL---GTTI--LKDRE-KXXXXXXXXXXRCNKITDLNGNLF 159
++L+ L L+ ++ L+ L G + L R + N +T L F
Sbjct: 131 DRLAGLP-EDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAF 189
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSL 219
+ L + K +NN N IT+L+ +LF L++L+ L L
Sbjct: 190 QSLT-GLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWL 248
Query: 220 SFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKN 279
N I L ++F L L + + + P + N L L++ N ++
Sbjct: 249 QHNA--ICHLPVSLFSSLHNLTFLSLKDNALRT--LPEGLFAHNQGLLH-LSLSYNQLET 303
Query: 280 IRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLK 339
I + NL+ L + L +N I+ + ++F N+ + +K + L +N L + F+NL
Sbjct: 304 IPEGAFTNLSRLVSLTLSHNAITDLPEHVFR-NLEQLVK-LSLDSNNLTALHPALFHNLS 361
Query: 340 ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L + LS N L ++ F ++ N+ L N
Sbjct: 362 RLQLLNLSRNQLTTLPGGIFDTNYDLFNLALLGN 395
Score = 92 (37.4 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 21 NVTKLQHLGTTI--LKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKIT 78
N+TK+ L T + L+ D G+ +L++LEITG + + F N+ + LTL
Sbjct: 74 NLTKVVFLNTQVRHLEPDAFGGL--PRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFD 131
Query: 79 NTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
++ LP LF ++ +E +L L N+L L L+ ++ L+ L
Sbjct: 132 --RLAGLPEDLFCHMDILE--SLQLQGNQLRTLP-GRLFQSLRDLRTL 174
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 291 (107.5 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 86/307 (28%), Positives = 155/307 (50%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
++ L + NN + + + NL +L ++L+ N + I F LK + L+NN+
Sbjct: 293 VQTLHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPK----FIGLSGLKHLVLANNH 348
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
+ I S++ L L T+ LS N L +I+ SF NN+++++LSFN+I + ++F L
Sbjct: 349 ITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATL 408
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLN-LSNNYITNLYENDKKQAPIYIKSL 444
NL L+L +N+L + VF N+ K+ +N N L N+ T + + +K+L
Sbjct: 409 NNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWST--FRGLES-----MKNL 461
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
L +N+I+ + + + L N+I L NL L L+L N I+ +
Sbjct: 462 QLKSNKIRALQDGVFYVM-HKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIE 520
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEK 563
T+ +L+++DLS N I+ + +L+ LN++HNRL+ L + F +E+
Sbjct: 521 VDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEE 580
Query: 564 LDISYNQ 570
L++ N+
Sbjct: 581 LNLRRNR 587
Score = 280 (103.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 98/373 (26%), Positives = 175/373 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ D R+L NL ++SL N L++I + + + L L + +S
Sbjct: 301 NKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFIGLSGL-KHLVLANNHITSISSESLAA 359
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L L TL+ + N + I S +L ++ L +N+I+ ++ + F L
Sbjct: 360 LPL---LRTLD---LSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEH--SFATLNNL 411
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
++ LSNN L + F NL +L + L++N L+ I ++F+ L +M N+ L N+I+
Sbjct: 412 TDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLE-INWSTFRGLESMKNLQLKSNKIRA 470
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ F + + +DL N++ + N+T + +LNLS N I+ + E D +
Sbjct: 471 LQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLR---HLNLSFNAISRI-EVDTWEF 526
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ LDLSNN I E L L+ L L N +++L F + LE L+L
Sbjct: 527 TQSLEVLDLSNNAINEFKPQHLDCL-HRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRR 585
Query: 498 NNIAVVVK-----RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
N ++ +++ F G+ L+ +DL N + ++ + L ILN+ N L S+
Sbjct: 586 NRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQ 645
Query: 553 RDVFSNTI-IEKL 564
+ F + + + KL
Sbjct: 646 VNAFEHMLRLNKL 658
Score = 270 (100.1 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 114/425 (26%), Positives = 192/425 (45%)
Query: 155 NGNLFRHLQKSI----VKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRH 210
+G + H QK++ AK +N N D D + C+K+ L
Sbjct: 237 DGGQYEHAQKALEAAAAAAKASNKYNIDCPKDCKCLNVLFD-----CDKL-HLERVPVLP 290
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
Y +Q L L+ NKL ++ V ++ L L ++S P +I L+ L+ L
Sbjct: 291 SY-VQTLHLANNKLN----DTTVLEIRNLLNLTKVSLKRNLLEVIPKFI---GLSGLKHL 342
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+ NN+I +I + SL L L ++L NK+ I N F + L + LS N + +
Sbjct: 343 VLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKS--NNLVHLILSFNEITNV 400
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
+F L L + LS N L ++ FKNLN + + L+FNQ++ + + F L ++
Sbjct: 401 NEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINW-STFRGLESMK 459
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
L L+ NK++ VF + +T ++L+ N I++L ++ L+LS N
Sbjct: 460 NLQLKSNKIRALQDGVFYVMHKIET---IDLAMNQISSLSRQGLFNLT-KLRHLNLSFNA 515
Query: 451 IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIG 510
I + V+ + F SL L L N I L L+ L+L HN + + + TF
Sbjct: 516 ISRIEVDTWE-FTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDC 574
Query: 511 MPNLQIIDLSFNEISMLTGEQ-----FYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKL 564
+ NL+ ++L N +S + +Q F KLR L++ N L+ + S +E L
Sbjct: 575 VKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEIL 634
Query: 565 DISYN 569
++ N
Sbjct: 635 NLGSN 639
Score = 209 (78.6 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 71/285 (24%), Positives = 139/285 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT++N + F L NL +L LS N+L + + VF +L+ L ++F+ N +
Sbjct: 395 NEITNVNEHSFATLNNLTDLELSNNRLSTLPIR--VFKNLNQLKKLALNFNQLEINWSTF 452
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L +++ L + +N I+ +++ Y + + I+L N+IS + FN+ K L
Sbjct: 453 ----RGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGL-FNLTK-L 506
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + LS N + IE DT+ + L + LS N + K L+ + + L+ N+++Y
Sbjct: 507 RHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQY 566
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDF--NLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ N F + NL +L+L+ N+L + + + + L+L N + + + K
Sbjct: 567 LQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQI--STKA 624
Query: 436 QAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
+ + ++ L+L +N + + VN F LR L F + +
Sbjct: 625 MSGLNNLEILNLGSNALASIQVN---AFEHMLRLNKLVFKSLNFI 666
Score = 47 (21.6 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 148 CNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKIT--DLN 204
C+ T NG ++L + ++NNNNN + S+ CN T D N
Sbjct: 29 CDIKTSGNG---KYLMSWSRRRRRNNNNNNNSSSNNNNAASESRSND-NCNYSTTNDFN 83
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 283 (104.7 bits), Expect = 9.2e-22, P = 9.2e-22
Identities = 84/296 (28%), Positives = 140/296 (47%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR-LKEI 320
+NL+ L +L + + + ++ +L L L +++LE+N++ H H +H L +
Sbjct: 99 RNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNRL---HALAAHTFLHTPGLASL 155
Query: 321 RLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
LSNN L ++ F L L + L +N L + T+F+ L + +VL+ N++ Y+ P
Sbjct: 156 GLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQP 215
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
F L L +LDL N L+ NVF + Q L L +N + +
Sbjct: 216 PLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQ---KLYLDHNLVAAVAPGAFLGMKA- 271
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
++ LDLS+NR+ + + L L L N + L F +L LE L L HN +
Sbjct: 272 LRWLDLSHNRVGSLLEDSFPGLL-GLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRL 330
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ + F G+ L+++ L+ N++ L F L +LN+S N LR LP F
Sbjct: 331 RQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAF 386
Score = 252 (93.8 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 99/387 (25%), Positives = 175/387 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N++ L + F H L L LS N L L+ +F L L + ++ + P
Sbjct: 136 NRLHALAAHTFLHTPGLASLGLSNNLLS--RLDEGLFRGLAHLWDLNLGWN--SLTVLPD 191
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L L L + N + ++ L L ++L N + + N+F + K L
Sbjct: 192 TAF-QGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVF-VKLPK-L 248
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+++ L +N + + F +K L + LS+N + S+ SF L + + LS N +
Sbjct: 249 QKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAG 308
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ P F +L L +L L N+L+ F+ + + L L++N + L
Sbjct: 309 LRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEV---LALNDNQLQELRPGGFLGL 365
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+ L+LS+N ++++P Q A L L+L+ + L AF L L L L+
Sbjct: 366 R-NLAVLNLSSNCLRDLPERAFQGLA-KLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKG 423
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N+IA V +R+ G+ L +DL+ N+++ L G F +L L ++ NRL +LP D
Sbjct: 424 NSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLSALPADALG 483
Query: 558 NTIIEK---LDISYNQDKIRPGRESNP 581
+++ LD+S+N+ + P P
Sbjct: 484 P--LQRTFWLDVSHNRLEALPAAALAP 508
Score = 250 (93.1 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 89/354 (25%), Positives = 164/354 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T L F+ L L+EL L+ NKL ++ +F +L+ L++S + S +
Sbjct: 184 NSLTVLPDTAFQGLAGLRELVLAGNKLAYLQ--PPLFCGLGELRELDLSRNTLRSVKANV 241
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++ L L+ L +D+N + + + + +L +++L +N++ + + F + L
Sbjct: 242 FV---KLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLG--L 296
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+RLS+N L + TF +L L + L +N L+ + +F L + + L+ NQ++
Sbjct: 297 HVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQE 356
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ P F+ L NL L+L N L+D F + + L+L + L A
Sbjct: 357 LRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHS---LHLEGGCLARL--GPLAFA 411
Query: 438 PIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
+ ++ L L N I +V L A+ L +L L N++ HL F +L LE L L
Sbjct: 412 GLSGLRRLFLKGNSIADVDERSLGGLAELL-ELDLTANQLTHLPGRLFQDLGRLEYLLLA 470
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
N ++ + + +D+S N + L +LR L++ +N LR+
Sbjct: 471 RNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSLRT 524
Score = 221 (82.9 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 83/303 (27%), Positives = 142/303 (46%)
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
WL D NN +I + NL+ L ++NL+ + ++ + + + L + L +N L
Sbjct: 84 WL--DGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQAL-LGL-RGLCHLHLEHNRLH 139
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ + TF + L ++ LS NLL + F+ L ++ ++ L +N + + AF L
Sbjct: 140 ALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAG 199
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L +L L NKL +F + + L+LS N + ++ N + P ++ L L +
Sbjct: 200 LRELVLAGNKLAYLQPPLFCGLGELR---ELDLSRNTLRSVKANVFVKLP-KLQKLYLDH 255
Query: 449 NRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
N + V P FL A LR L L N + L +F L L +L L HN +A + RT
Sbjct: 256 NLVAAVAPGAFLGMKA--LRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRT 313
Query: 508 FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PRDVFSNTIIEKLDI 566
F + L+ + L N + L E F +L +L ++ N+L+ L P + L++
Sbjct: 314 FKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNL 373
Query: 567 SYN 569
S N
Sbjct: 374 SSN 376
Score = 218 (81.8 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 79/288 (27%), Positives = 130/288 (45%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L+ N S I F N+ L + L + L +E L+ L + L +N L ++
Sbjct: 85 LDGNNFSSIPAAAFR-NL-SGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALA 142
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT 415
+F + + ++ LS N + + F L +L L+L N L F + +
Sbjct: 143 AHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLR- 201
Query: 416 PMNLNLSNNYITNLYENDKKQAPIY-----IKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
L L+ N + L Q P++ ++ LDLS N ++ V N L+KLY
Sbjct: 202 --ELVLAGNKLAYL------QPPLFCGLGELRELDLSRNTLRSVKANVFVKLP-KLQKLY 252
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
LD N + + AF + L L L HN + +++ +F G+ L ++ LS N ++ L
Sbjct: 253 LDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPR 312
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYNQ-DKIRPG 576
F L L + HNRLR LP + F+ +E L ++ NQ ++RPG
Sbjct: 313 TFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPG 360
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 95/407 (23%), Positives = 174/407 (42%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ--HLG---TTILKGDQLQGIFNSKLRELEITGKDL 56
+L LS+N LS L+ L+ + L +LG T+L QG+ + LREL + G L
Sbjct: 154 SLGLSNNLLSRLDEG-LFRGLAHLWDLNLGWNSLTVLPDTAFQGL--AGLRELVLAGNKL 210
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS-VLNMAT 115
++ P F + +L L NT + + + +F K+ ++++ LD HN ++ V A
Sbjct: 211 AYLQPPLFCGLGELRELDLS-RNT-LRSVKANVFVKLPKLQKLYLD--HNLVAAVAPGAF 266
Query: 116 LYSNVTK---LQH--LGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAK 170
L + L H +G+ +L+D N + L F+ L + + +
Sbjct: 267 LGMKALRWLDLSHNRVGS-LLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLH-FLEELQ 324
Query: 171 KNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELN 230
+N + N++ +L F L NL L+LS N L+ +L
Sbjct: 325 LGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLR--DLP 382
Query: 231 SNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS 290
F KL L + + P + L+ L L + N+I ++ SL L
Sbjct: 383 ERAFQGLAKLHSLHLEGGCL-ARLGP--LAFAGLSGLRRLFLKGNSIADVDERSLGGLAE 439
Query: 291 LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNL 350
L ++L N+++ + LF ++ RL+ + L+ N L + +D L+ + +S+N
Sbjct: 440 LLELDLTANQLTHLPGRLFQ-DLG-RLEYLLLARNRLSALPADALGPLQRTFWLDVSHNR 497
Query: 351 LKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L+++ + L+ + + L N ++ P P L +L L+ N
Sbjct: 498 LEALPAAALAPLSRLRFLSLRNNSLRTFAPQP----PGLERLWLEGN 540
Score = 45 (20.9 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 25/91 (27%), Positives = 36/91 (39%)
Query: 37 QLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENI 96
QL G R L + G + I +AF N+ L L+ + E P L + +
Sbjct: 71 QLPGGLPPGTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLE-PQALLG-LRGL 128
Query: 97 EQMTLDLSHNKLSVLNMATLYSNVTKLQHLG 127
L L HN+L L T + + L LG
Sbjct: 129 --CHLHLEHNRLHALAAHT-FLHTPGLASLG 156
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 284 (105.0 bits), Expect = 9.4e-22, P = 9.4e-22
Identities = 96/329 (29%), Positives = 159/329 (48%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYI 259
I ++ F+ L +++L LS N+++ +++ + F E + + E+S S N E P
Sbjct: 72 IIEVGPKAFKTL-RIKKLILSNNRIE--KIHDHAFTGLENV-MQELSLSENNLKEVPTSA 127
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
L L L L++ N I+NI + N+TSL +NL N+I + + F N+ L+
Sbjct: 128 L-AGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFA-NVKMSLQN 185
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L NN + S N+ L + + YN + +I+ F NL ++ + L+ N I I
Sbjct: 186 LILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIK 245
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
A N PNL L L +N L+ + V Q L+LS N T++ + + +
Sbjct: 246 GGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQV---LDLSFNNFTDITK-EMFEGLE 301
Query: 440 YIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
I+ L+L +NRI V P F T L L+L N + + L ++SL +N
Sbjct: 302 SIQHLNLDSNRISAVAPGAFAGT---PLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNN 358
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISML 527
NI V + +F +PNL +DL+ N+I L
Sbjct: 359 NIREVHELSFDHLPNLHTLDLANNKIMSL 387
Score = 276 (102.2 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 93/356 (26%), Positives = 165/356 (46%)
Query: 219 LSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIK 278
L+ IIE+ F +L+ + + ++ + L N ++ L++ NN+K
Sbjct: 65 LALENADIIEVGPKAFKTLRIKKLILSNNRIEKIHDHAFTGLE---NVMQELSLSENNLK 121
Query: 279 NIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
+ +L L LN ++L+ NKI I F N+ L ++ L N + + +DTF N+
Sbjct: 122 EVPTSALAGLRVLNILSLKCNKIENITTKAF-VNMTS-LIDVNLGCNQICSMAADTFANV 179
Query: 339 K-ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
K L + L N + + + +N+NN++ + + +N+I I N FVNL +L L L N
Sbjct: 180 KMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGN 239
Query: 398 KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN 457
+ + N T + LN NN T +N + ++ LDLS N ++
Sbjct: 240 NISEIKGGALQN-TPNLHYLYLN-ENNLQT--LDNGVLEQFKQLQVLDLSFNNFTDITKE 295
Query: 458 FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
+ +S++ L LD N I + AF +L LL L +N + V ++T G P L+++
Sbjct: 296 MFEGL-ESIQHLNLDSNRISAVAPGAFAGTPLL-LLWLPNNCLTEVSQQTLKGAPFLRMV 353
Query: 518 DLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKI 573
LS N I + F L L++++N++ SL S E L + ++ +
Sbjct: 354 SLSNNNIREVHELSFDHLPNLHTLDLANNKIMSLQNKSLSGP--ENLAVRLQENPV 407
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 87/373 (23%), Positives = 158/373 (42%)
Query: 36 DQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIEN 95
++L ++REL + D+ + P AF + L ++N +IE++ F +EN
Sbjct: 52 EKLSTTTTMEVRELALENADIIEVGPKAFKTLRI---KKLILSNNRIEKIHDHAFTGLEN 108
Query: 96 IEQMTLDLSHNKLS-----------VLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXX 144
+ Q L LS N L VLN+ +L N K++++ T +
Sbjct: 109 VMQ-ELSLSENNLKEVPTSALAGLRVLNILSLKCN--KIENITTKAFVNMTSLIDVNLG- 164
Query: 145 XXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLN 204
CN+I + + F +++ S+ +NN + S + + NKI +
Sbjct: 165 ---CNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIR 221
Query: 205 GNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNL 264
N F +L +L LSL+ N + E+ L L ++ + N +L +
Sbjct: 222 QNDFVNLTSLSMLSLNGNNIS--EIKGGALQNTPNLHYLYLNEN--NLQTLDNGVLEQ-F 276
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
L+ L + NN +I L S+ ++NL+ N+IS + F L + L N
Sbjct: 277 KQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAF---AGTPLLLLWLPN 333
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N L + T L ++LS N ++ + SF +L N+ + L+ N+I + N +
Sbjct: 334 NCLTEVSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPNLHTLDLANNKIMSLQ-NKSL 392
Query: 385 NLPNLVKLDLQDN 397
+ P + + LQ+N
Sbjct: 393 SGPENLAVRLQEN 405
Score = 143 (55.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
IK L LSNNRI+++ + + +++L L N +K + +A L VL +LSL+ N I
Sbjct: 85 IKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCNKI 144
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY-FSFKLRILNISHNRLRSLPRDVFSN- 558
+ + F+ M +L ++L N+I + + F L+ L + +N + P N
Sbjct: 145 ENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKAVRNM 204
Query: 559 TIIEKLDISYNQDKIRPGRESN 580
+ L I YN KI R+++
Sbjct: 205 NNLIALHIKYN--KINAIRQND 224
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 284 (105.0 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 85/301 (28%), Positives = 148/301 (49%)
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
++ N I NI + + L L ++L+YN+I +H F + RL+E+ L NN L+ +
Sbjct: 65 SLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFE-KL-SRLEELYLGNNLLQAL 122
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
T L++L + + N + + SF+ L +++ + L N + + F L NL+
Sbjct: 123 APGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLL 182
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNN 449
L L+ N+++ N F+ + + LNLS N + + AP+ + SL LS N
Sbjct: 183 YLHLESNRIRFLGKNAFAQLGKLRF---LNLSANELQPSLRHAATFAPLRSLSSLILSAN 239
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+Q + Q L L L N++ HL AF L+ L L LE N ++ +
Sbjct: 240 NLQHLGPRIFQHLP-RLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLE 298
Query: 510 GMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS-NTIIEKLDISY 568
+ +L+ +DLS NE+S L F +LR L++ +N L +L D+F+ + + +LD+
Sbjct: 299 PLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAASPALYRLDLDG 358
Query: 569 N 569
N
Sbjct: 359 N 359
Score = 171 (65.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 76/281 (27%), Positives = 131/281 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I L+ F L L+EL L N LQ + + L+ L I ++ N NE
Sbjct: 93 NQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGT-----LAPLRKLRILYA--NGNEISR 145
Query: 258 YILN--KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L +L L +D N + + + L +L Y++LE N+I + N F + K
Sbjct: 146 LSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFA-QLGK 204
Query: 316 RLKEIRLSNNYLE--LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L+ + LS N L+ L + TF L+ L+++ LS N L+ + F++L + + L N
Sbjct: 205 -LRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGN 263
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
Q+ ++ P AF L L +L L+ N+L + + S + L+LS N ++ L+
Sbjct: 264 QLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEA---LDLSGNELSALHPAT 320
Query: 434 KKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
++ L L NN + + + + +L +L LD N
Sbjct: 321 FGHLG-RLRELSLRNNALSALSGDIFAA-SPALYRLDLDGN 359
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 54/216 (25%), Positives = 93/216 (43%)
Query: 343 TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF 402
T +L N + +I F L + + L +NQI+ ++P F L L +L L +N L+
Sbjct: 63 TYSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQAL 122
Query: 403 NLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTF 462
+ + + L + N I+ L + +K L L N + +P
Sbjct: 123 APGTLAPLRKLRI---LYANGNEISRLSRGSFEGLESLVK-LRLDGNALGALPDAVFAPL 178
Query: 463 ADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR--TFIGMPNLQIIDLS 520
+ L L+L+ N I+ L AF L L L+L N + ++ TF + +L + LS
Sbjct: 179 GNLLY-LHLESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILS 237
Query: 521 FNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + L F +L +L++ N+L L + F
Sbjct: 238 ANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAF 273
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 59/207 (28%), Positives = 92/207 (44%)
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
KT+S + +++L L N I I F L L +LDLQ N+++ + F ++ +
Sbjct: 51 KTSSLPSPHDVLTYSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLE 110
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
L L NN + L AP+ ++ L + N I + + +SL KL LD
Sbjct: 111 ---ELYLGNNLLQALAPGTL--APLRKLRILYANGNEISRLSRGSFEGL-ESLVKLRLDG 164
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI--SMLTGEQ 531
N + L F L L L LE N I + K F + L+ ++LS NE+ S+
Sbjct: 165 NALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHAAT 224
Query: 532 FYFSFKLRILNISHNRLRSLPRDVFSN 558
F L L +S N L+ L +F +
Sbjct: 225 FAPLRSLSSLILSANNLQHLGPRIFQH 251
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 285 (105.4 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 92/310 (29%), Positives = 146/310 (47%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+ L L L +D+N++ + + L NL SL + L NKI+ I + F N+ L +
Sbjct: 233 EGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALNKITHIPDYAFT-NLSS-LVVLH 290
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L NN ++ I F L L T+ L+YN + + K L N+ + N I I
Sbjct: 291 LHNNKIKTIGKHCFDGLDNLETLDLNYNNMVEFPE-AIKALPNLKELAFHSNYISIIPDG 349
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
AF P L + L DN L + F N++ + L + + + N + +
Sbjct: 350 AFAGNPLLRMIHLYDNPLSFVGNSAFQNLSDLHS---LVIRGASMVQRFPN--LTGTVNL 404
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+SL L+ +I +PVN Q LR L L +N IK D +F LE +SL+HN I
Sbjct: 405 ESLTLTGTKINSIPVNLCQE-QKMLRTLDLSYNNIK--DLPSFTGCRSLEEISLQHNQIH 461
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTII 561
+ TF G+ +L+I+DLS N I + E F + L++S N L S+P + S +
Sbjct: 462 EITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVNLDLSFNELTSVPTEGLSG--L 519
Query: 562 EKLDISYNQD 571
+L ++ N +
Sbjct: 520 NQLKLAGNSE 529
Score = 248 (92.4 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 89/334 (26%), Positives = 157/334 (47%)
Query: 241 QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
Q L++S + N P KN LE L + N++ I +L L L + L+ N+
Sbjct: 143 QALDVSMN--NITRLPEDAF-KNFPYLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQ 199
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
+ + N + L+ +RL N++ + D+F L +L + L N L +
Sbjct: 200 LKTVPNEAIR-GL-SGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLS 257
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
NL ++ + L+ N+I +I AF NL +LV L L +NK+K + F + + +T ++LN
Sbjct: 258 NLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLET-LDLN 316
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADS--LRKLYLDFNEIKH 478
NN + + K P +K L +N I +P FA + LR ++L N +
Sbjct: 317 Y-NNMVE--FPEAIKALP-NLKELAFHSNYISIIPDG---AFAGNPLLRMIHLYDNPLSF 369
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKR--TFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
+ +AF NL L L + A +V+R G NL+ + L+ +I+ +
Sbjct: 370 VGNSAFQNLSDLHSLVIRG---ASMVQRFPNLTGTVNLESLTLTGTKINSIPVNLCQEQK 426
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
LR L++S+N ++ LP ++ E++ + +NQ
Sbjct: 427 MLRTLDLSYNNIKDLPSFTGCRSL-EEISLQHNQ 459
Score = 189 (71.6 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 75/308 (24%), Positives = 137/308 (44%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + NNI + + N L + L N +S IH + K LK + L NN L+
Sbjct: 145 LDVSMNNITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALS-GL-KELKVLTLQNNQLKT 202
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ ++ L L ++ L N + ++ SF+ L + ++ L N + + + NLP+L
Sbjct: 203 VPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSL 262
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L L NK+ F+N++S L+L NN I + ++ +++LDL+ N
Sbjct: 263 QALTLALNKITHIPDYAFTNLSSLVV---LHLHNNKIKTIGKHCFDGLD-NLETLDLNYN 318
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+ E P ++ + L++L N I + AF +L ++ L N ++ V F
Sbjct: 319 NMVEFP-EAIKALPN-LKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNPLSFVGNSAFQ 376
Query: 510 GMPNLQIIDLSFNEISMLTG-EQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDIS 567
+ +L L SM+ + L L ++ ++ S+P ++ ++ LD+S
Sbjct: 377 NLSDLH--SLVIRGASMVQRFPNLTGTVNLESLTLTGTKINSIPVNLCQEQKMLRTLDLS 434
Query: 568 YNQDKIRP 575
YN K P
Sbjct: 435 YNNIKDLP 442
Score = 177 (67.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 85/361 (23%), Positives = 153/361 (42%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L EL + G DL FI P A + LTL+ N Q++ +P+ + ++ + LD +H
Sbjct: 166 LEELRLAGNDLSFIHPKALSGLKELKVLTLQ--NNQLKTVPNEAIRGLSGLQSLRLDANH 223
Query: 106 NKLSVLNMATLYSNVTKLQHLG------TTILKDREKXXXXXXXXXXRCNKITDLNGNLF 159
++ + + + + +L+HL T + NKIT + F
Sbjct: 224 --ITAVPKDS-FEGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALNKITHIPDYAF 280
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSL 219
+L S+V +NN + N + + + L NL+EL+
Sbjct: 281 TNLS-SLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNYNNMVEFP-EAIKALPNLKELAF 338
Query: 220 SFNKLQIIELNSNVFD-VFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIK 278
N + II + + + + L + S ++ F +NL+ L L + ++
Sbjct: 339 HSNYISIIPDGAFAGNPLLRMIHLYDNPLSFVGNSAF------QNLSDLHSLVIRGASMV 392
Query: 279 NIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
R +L +L + L KI+ I NL K L+ + LS N ++ + S F
Sbjct: 393 Q-RFPNLTGTVNLESLTLTGTKINSIPVNLCQEQ--KMLRTLDLSYNNIKDLPS--FTGC 447
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+ L I+L +N + I +F+ L+++ + LS N+I I+ AF + +V LDL N+
Sbjct: 448 RSLEEISLQHNQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVNLDLSFNE 507
Query: 399 L 399
L
Sbjct: 508 L 508
Score = 177 (67.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 99/422 (23%), Positives = 176/422 (41%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTL---DL 103
R ++ +G+ L + P + + L ++ I LP F +E++ L DL
Sbjct: 122 RGVDCSGRGLAAVPPGL-----SAFTQALDVSMNNITRLPEDAFKNFPYLEELRLAGNDL 176
Query: 104 S--HNK----LSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGN 157
S H K L L + TL +N K T+ + + N IT + +
Sbjct: 177 SFIHPKALSGLKELKVLTLQNNQLK------TVPNEAIRGLSGLQSLRLDANHITAVPKD 230
Query: 158 LFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQEL 217
F L + +N+ E + NKIT + F +L +L L
Sbjct: 231 SFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLA-LNKITHIPDYAFTNLSSLVVL 289
Query: 218 SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNI 277
L NK++ I + FD + L+ L+++++ N EFP I K L L+ LA +N I
Sbjct: 290 HLHNNKIKTI--GKHCFDGLDNLETLDLNYN--NMVEFPEAI--KALPNLKELAFHSNYI 343
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
I + + L I+L N +S + N+ F N+ + + ++ + T
Sbjct: 344 SIIPDGAFAGNPLLRMIHLYDNPLSFVGNSAFQ-NLSDLHSLVIRGASMVQRFPNLT--G 400
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L ++TL+ + SI + + + LS+N IK + P+ F +L ++ LQ N
Sbjct: 401 TVNLESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDL-PS-FTGCRSLEEISLQHN 458
Query: 398 KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN 457
++ + + F ++S + L+LS N I +++ + +LDLS N + VP
Sbjct: 459 QIHEITDDTFQGLSSLRI---LDLSRNRICKIHKEAFTTIGAIV-NLDLSFNELTSVPTE 514
Query: 458 FL 459
L
Sbjct: 515 GL 516
Score = 124 (48.7 bits), Expect = 0.00055, P = 0.00055
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ ++LD+S N I +P + + F L +L L N++ + A L L++L+L++N
Sbjct: 141 FTQALDVSMNNITRLPEDAFKNFP-YLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQ 199
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
+ V G+ LQ + L N I+ + + F +LR L + N L +P SN
Sbjct: 200 LKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNL 259
Query: 560 -IIEKLDISYNQ 570
++ L ++ N+
Sbjct: 260 PSLQALTLALNK 271
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 285 (105.4 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 100/366 (27%), Positives = 175/366 (47%)
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYY-ILNKNLNTLEWLAMD 273
+ L+LS+N+L E++S F+ LQ E+ NSNE L + L +
Sbjct: 73 RSLNLSYNRLS--EIDSAAFEDLTNLQ--EV---YLNSNELTAIPSLGAASIGVVSLFLQ 125
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
+N I ++ L + SL ++L N I++I ++ F + R++E+ L++N + ++ES
Sbjct: 126 HNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGL--RIRELNLASNRISILESG 183
Query: 334 TFYNL-KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
F L + L T+ LS N + + +FK L + + L+ N+I+ I F L +L L
Sbjct: 184 AFDGLSRSLLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVL 242
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ 452
LQ N + F ++ L+L N + + + + L LSNN I
Sbjct: 243 RLQRNNISRLTDGAFWGLSKMHV---LHLEYNSLVEV-NSGSLYGLTALHQLHLSNNSIS 298
Query: 453 EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP 512
+ + +F L +L L FN + LD + L L +L L HN I+ + + F G+
Sbjct: 299 RIQRDGW-SFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLK 357
Query: 513 NLQIIDLSFNEISML---TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLD-ISY 568
+L+++DL NEIS T F L L + N+++S+ + FS +E L+ ++
Sbjct: 358 SLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSG--LESLEHLNL 415
Query: 569 NQDKIR 574
++ IR
Sbjct: 416 GENAIR 421
Score = 280 (103.6 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 101/364 (27%), Positives = 168/364 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N++++++ F L NLQE+ L+ N+L I L + V L L + ++
Sbjct: 80 NRLSEIDSAAFEDLTNLQEVYLNSNELTAIPSLGAASIGVVS-LFLQHNKILSVDGSQLK 138
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
Y+ +LE L + +NNI IR+ N + +NL N+IS + + F + +
Sbjct: 139 SYL------SLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAFD-GLSRS 191
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L +RLS N + + F L L + L+ N ++ I+ +F+ L+++ + L N I
Sbjct: 192 LLTLRLSKNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNIS 250
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ AF L + L L+ N L + N +T+ L+LSNN I+ + + D
Sbjct: 251 RLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALH---QLHLSNNSISRI-QRDGWS 306
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
+ L LS N + + L + SL L L N I H+ AF L L +L L+
Sbjct: 307 FCQKLHELILSFNNLTRLDEESLAELS-SLSILRLSHNAISHIAEGAFKGLKSLRVLDLD 365
Query: 497 HNNIAVVVKRT---FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
HN I+ ++ T F G+ NL + L N+I + F L LN+ N +RS+
Sbjct: 366 HNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQF 425
Query: 554 DVFS 557
D F+
Sbjct: 426 DAFA 429
Score = 215 (80.7 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 90/328 (27%), Positives = 146/328 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDV---FEKLQLLEISFSLFNSNE 254
NKI ++G+ + +L+ L LS N I E+ S+ F +L L S+ S
Sbjct: 127 NKILSVDGSQLKSYLSLEVLDLSSNN--ITEIRSSCFPNGLRIRELNLASNRISILESGA 184
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
F L+++L TL + N I + + L L ++L N+I I F +
Sbjct: 185 FDG--LSRSLLTLR---LSKNRITQLP-VKAFKLPRLTQLDLNRNRIRLIEGLTFQ-GLD 237
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
L+ +RL N + + F+ L +++ + L YN L + + S L + + LS N
Sbjct: 238 S-LEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNS 296
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
I I + + L +L L N L + + ++S L LS+N I+++ E
Sbjct: 297 ISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSI---LRLSHNAISHIAEGAF 353
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFA--DSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
K ++ LDL +N I + F D+L KL L N+IK + AF L+ LE
Sbjct: 354 KGLKS-LRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEH 412
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLS 520
L+L N I V F M NL+ + +S
Sbjct: 413 LNLGENAIRSVQFDAFAKMKNLKELYIS 440
Score = 207 (77.9 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 87/377 (23%), Positives = 172/377 (45%)
Query: 100 TLDLSHNKLSVLNMATLYSNVTKLQ--HLGT---TILKDREKXXXXXXXXXXRCNKITDL 154
+L+LS+N+LS ++ A + ++T LQ +L + T + + NKI +
Sbjct: 74 SLNLSYNRLSEIDSAA-FEDLTNLQEVYLNSNELTAIPSLGAASIGVVSLFLQHNKILSV 132
Query: 155 NGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNL 214
+G+ + V +NN E + S N+I+ L F L +
Sbjct: 133 DGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLAS-NRISILESGAFDGL-SR 190
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
L+L +K +I +L F + +L L+++ + E + + L++LE L +
Sbjct: 191 SLLTLRLSKNRITQLPVKAFKL-PRLTQLDLNRNRIRLIEGLTF---QGLDSLEVLRLQR 246
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
NNI + + + + L+ ++ ++LEYN + ++++ + + L ++ LSNN + I+ D
Sbjct: 247 NNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSL-YGL-TALHQLHLSNNSISRIQRDG 304
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
+ ++L+ + LS+N L + S L+++ + LS N I +I AF L +L LDL
Sbjct: 305 WSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDL 364
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
N++ + T L L N I ++ + ++ L+L N I+ V
Sbjct: 365 DHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLES-LEHLNLGENAIRSV 423
Query: 455 PVNFLQTFADSLRKLYL 471
+ + L++LY+
Sbjct: 424 QFDAFAKMKN-LKELYI 439
Score = 164 (62.8 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 85/380 (22%), Positives = 165/380 (43%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ--HLGTTILKGDQLQGIFNSKLRELEITGKDLKFI 59
+L+LS+N+LS ++ A + ++T LQ +L + L G + + L + + +
Sbjct: 74 SLNLSYNRLSEIDSAA-FEDLTNLQEVYLNSNELTAIPSLGAASIGVVSLFLQHNKILSV 132
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
D S + + L L N I E+ S F I + L+L+ N++S+L +
Sbjct: 133 DGSQLKSYLSLEVLDLSSNN--ITEIRSSCFPNGLRIRE--LNLASNRISILESGA-FDG 187
Query: 120 VTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQK------SIVKAKKNN 173
+++ L + K+R R ++ DLN N R ++ ++ +
Sbjct: 188 LSR-SLLTLRLSKNRITQLPVKAFKLPRLTQL-DLNRNRIRLIEGLTFQGLDSLEVLRLQ 245
Query: 174 NNNEDQVSDREK-XXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232
NN +++D N + ++N L L +L LS N + I+ +
Sbjct: 246 RNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGW 305
Query: 233 VFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN 292
F +KL L +SF+ N L + L++L L + +N I +I + L SL
Sbjct: 306 SF--CQKLHELILSFN--NLTRLDEESLAE-LSSLSILRLSHNAISHIAEGAFKGLKSLR 360
Query: 293 YINLEYNKIS-KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
++L++N+IS I + F L ++ L N ++ + F L+ L + L N +
Sbjct: 361 VLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAI 420
Query: 352 KSIKTTSFKNLNNMLNIVLS 371
+S++ +F + N+ + +S
Sbjct: 421 RSVQFDAFAKMKNLKELYIS 440
Score = 142 (55.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 73/332 (21%), Positives = 140/332 (42%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVT-KLQHLGTTILKGDQLQGIFNS-KLRELEITGKDLKF 58
++L L HNK+ ++ + L S ++ ++ L + + + N ++REL + +
Sbjct: 120 VSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISI 179
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
++ AFD + LTL+++ +I +LP F K+ + Q LDL+ N++ ++ T
Sbjct: 180 LESGAFDGLSRSL-LTLRLSKNRITQLPVKAF-KLPRLTQ--LDLNRNRIRLIEGLTFQG 235
Query: 119 ----NVTKLQHLGTTILKDREK-XXXXXXXXXXRCNKITDLN-GNLFRHLQKSIVKAKKN 172
V +LQ + L D N + ++N G+L+ ++ + +
Sbjct: 236 LDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYG--LTALHQLHLS 293
Query: 173 NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232
NN+ D N +T L+ L +L L LS N + I
Sbjct: 294 NNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIA--EG 351
Query: 233 VFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN 292
F + L++L++ + + L+ L L + N IK++ + L SL
Sbjct: 352 AFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLE 411
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
++NL N I + + F K LKE+ +S+
Sbjct: 412 HLNLGENAIRSVQFDAFAKM--KNLKELYISS 441
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/139 (25%), Positives = 71/139 (51%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
+ P + +SL+LS NR+ E+ + + L+++YL+ NE+ + + ++ V+ L
Sbjct: 66 RDLPSWTRSLNLSYNRLSEIDSAAFEDLTN-LQEVYLNSNELTAIPSLGAASIGVVSLF- 123
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
L+HN I V +L+++DLS N I+ + F ++R LN++ NR+ L
Sbjct: 124 LQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESG 183
Query: 555 VFSNTIIEKLDISYNQDKI 573
F L + ++++I
Sbjct: 184 AFDGLSRSLLTLRLSKNRI 202
Score = 124 (48.7 bits), Expect = 0.00058, P = 0.00058
Identities = 41/160 (25%), Positives = 79/160 (49%)
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
+LNLS N ++ + ++ + ++ + L++N + +P L + + L+L N+I
Sbjct: 74 SLNLSYNRLSEI-DSAAFEDLTNLQEVYLNSNELTAIPS--LGAASIGVVSLFLQHNKIL 130
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY-FSF 536
+D + + LE+L L NNI + F ++ ++L+ N IS+L F S
Sbjct: 131 SVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSR 190
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPG 576
L L +S NR+ LP F + +LD++ N+ ++ G
Sbjct: 191 SLLTLRLSKNRITQLPVKAFKLPRLTQLDLNRNRIRLIEG 230
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 278 (102.9 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 121/456 (26%), Positives = 199/456 (43%)
Query: 101 LDLSHNKLSVL---NMATLYS-NVTKLQHLGTTILKDRE-KXXXXXXXXXXRCNKITDLN 155
LD+SHN VL TL V + + G +++ D+ NKI L
Sbjct: 282 LDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALP 341
Query: 156 GNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITD--LNGNLFRHLYN 213
LF K I + NN+ N+IT ++ N F L
Sbjct: 342 TELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIR 401
Query: 214 LQELSLSFNKLQIIELNSNVFDVFEKLQLLEI-----------SFSLFNS--------NE 254
L L+LS NKL +L +F LQ+L + +F+ N+ N+
Sbjct: 402 LVLLNLSHNKLT--KLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNK 459
Query: 255 FPY---YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
Y Y LN L L L++DNN + + + N ++L +NL N++ + L +
Sbjct: 460 LKYLDAYALN-GLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALRNM 518
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
+ L+ + L N + ++E F L L + L N L++I +F++L N+ + L+
Sbjct: 519 ---RHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLA 575
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I + P AF ++ + L N+L D N +FSN+ S + LN+S+N + +
Sbjct: 576 RNRIAVVEPGAFEMTSSIQAVRLDGNELNDIN-GLFSNMPSL---LWLNISDNRLESF-- 629
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
D P ++ LDL NR+ + F L+ L + FN+++ + ++ N +E
Sbjct: 630 -DYGHVPSTLQWLDLHKNRLSSLSNRFGLDSELKLQTLDVSFNQLQRIGPSSIPNS--IE 686
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
LL L N I V TF+ NL +DL N+I+ L
Sbjct: 687 LLFLNDNLITTVDPDTFMHKTNLTRVDLYANQITTL 722
Score = 274 (101.5 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 99/376 (26%), Positives = 181/376 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I+ LN LF +L LQ L LS N++ ++ N F +L LL +S + E
Sbjct: 360 NSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEI 419
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ +L TL+ L + +N ++NI + + +L+ + L +NK+ + + + N L
Sbjct: 420 F---SDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYL--DAYALNGLYVL 474
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN L + D F N L + L+ N LK++ + +N+ ++ + L N I
Sbjct: 475 SLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPL-ALRNMRHLRTVDLGENMITV 533
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ +AF L NL L L N L++ ++ F ++ + Q LNL+ N I + E +
Sbjct: 534 MEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQI---LNLARNRIA-VVEPGAFEM 589
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNL-DVLELLSLE 496
I+++ L N + ++ N L + SL L + N ++ D +G++ L+ L L
Sbjct: 590 TSSIQAVRLDGNELNDI--NGLFSNMPSLLWLNISDNRLESFD---YGHVPSTLQWLDLH 644
Query: 497 HNNIAVVVKRTFIGMP-NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
N ++ + R + LQ +D+SFN++ + S +L LN N + ++ D
Sbjct: 645 KNRLSSLSNRFGLDSELKLQTLDVSFNQLQRIGPSSIPNSIELLFLN--DNLITTVDPDT 702
Query: 556 FSN-TIIEKLDISYNQ 570
F + T + ++D+ NQ
Sbjct: 703 FMHKTNLTRVDLYANQ 718
Score = 272 (100.8 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 104/376 (27%), Positives = 183/376 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N L N F L L+ LS++ N + +I + LQ+L +S + + P
Sbjct: 287 NDFVVLPANGFGTLRRLRVLSVNNNGISMIA--DKALSGLKNLQILNLSSNKIVA--LPT 342
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLY-NLTSLNYINLEYNKISK--IHNNLFHFNIH 314
+ + ++ + + NN+I ++ N L+ NL L ++L N+I+ I N F I
Sbjct: 343 ELFAEQAKIIQEVYLQNNSI-SVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLI- 400
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
RL + LS+N L +E + F +L L + L +N L++I +F +NN+ ++LS N+
Sbjct: 401 -RLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNK 459
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
+KY+ A L L L L +N L + + F N ++ Q +LNL+ N + + +
Sbjct: 460 LKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQ---DLNLNGNQLKTVPLALR 516
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
+++++DL N I + + + + L L L N ++++ F +L L++L+
Sbjct: 517 NMR--HLRTVDLGENMITVMEDSAFKGLGN-LYGLRLIGNYLENITMHTFRDLPNLQILN 573
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
L N IAVV F ++Q + L NE++ + G F L LNIS NRL S
Sbjct: 574 LARNRIAVVEPGAFEMTSSIQAVRLDGNELNDING-LFSNMPSLLWLNISDNRLESFDYG 632
Query: 555 VFSNTIIEKLDISYNQ 570
+T+ + LD+ N+
Sbjct: 633 HVPSTL-QWLDLHKNR 647
Score = 240 (89.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 97/384 (25%), Positives = 176/384 (45%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS--LFNSNEFPYYIL 260
L F HL LQ+LS+ + KL L V D E+L+ L + L+ + F
Sbjct: 137 LEAQSFAHLVRLQQLSIQYCKLG--RLGRQVLDGLEQLRNLTLRTHNILWPALNFEIEAD 194
Query: 261 NKNLNT-LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
++ LE L + +NNI ++ + L+ L+ +N+ N++ ++ F +
Sbjct: 195 AFSVTRRLERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQDVNELGFRDRSQEPTNG 254
Query: 320 IRLSNNYLELIE----SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
S + E + S T +L +L + +S+N + F L + + ++ N I
Sbjct: 255 STESTSTTESAKKSSSSSTSCSL-DLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGI 313
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
I A L NL L+L NK+ +F+ + + L NN I+ L N +
Sbjct: 314 SMIADKALSGLKNLQILNLSSNKIVALPTELFAE--QAKIIQEVYLQNNSISVL--NPQL 369
Query: 436 QAPI-YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--NEIKHLDATAFGNLDVLEL 492
+ + +++LDLS N+I ++ TF +R + L+ N++ L+ F +L L++
Sbjct: 370 FSNLDQLQALDLSMNQITSTWID-KNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQI 428
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L+L HN + + TF M NL + LS N++ L + L +L++ +N L +
Sbjct: 429 LNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVH 488
Query: 553 RDVFSN-TIIEKLDISYNQDKIRP 575
D F N + ++ L+++ NQ K P
Sbjct: 489 PDAFRNCSALQDLNLNGNQLKTVP 512
Score = 209 (78.6 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 99/386 (25%), Positives = 176/386 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N I L N+F L L L++S N+LQ + EL E + + ++ +
Sbjct: 210 NNIWSLPDNIFCTLSELSALNMSENRLQDVNELGFRDRSQEPTNGSTESTSTTESAKKSS 269
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ +L+ LE+L + +N+ + L L +++ N IS I + + K
Sbjct: 270 SSSTSCSLD-LEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALS-GL-KN 326
Query: 317 LKEIRLSNNYLELIESDTFYN-LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+ + LS+N + + ++ F K + + L N + + F NL+ + + LS NQI
Sbjct: 327 LQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQI 386
Query: 376 K--YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
+I N FV L LV L+L NKL +FS++ + Q LNL +N + N+ +
Sbjct: 387 TSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQI---LNLRHNQLENIAADT 443
Query: 434 KKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
AP+ + +L LS+N+++ + L L L LD N + + AF N L+
Sbjct: 444 F--APMNNLHTLLLSHNKLKYLDAYALNGLY-VLSLLSLDNNALIGVHPDAFRNCSALQD 500
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L+L N + V M +L+ +DL N I+++ F L L + N L ++
Sbjct: 501 LNLNGNQLKTV-PLALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENIT 559
Query: 553 RDVFSNTI-IEKLDISYNQDKI-RPG 576
F + ++ L+++ N+ + PG
Sbjct: 560 MHTFRDLPNLQILNLARNRIAVVEPG 585
Score = 141 (54.7 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 100/468 (21%), Positives = 193/468 (41%)
Query: 5 LSHNKLSVLN------MATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
L +N +SVLN + L + + + +T + + G+ L L ++ L
Sbjct: 357 LQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVL--LNLSHNKLTK 414
Query: 59 IDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY 117
++P F ++ Y L L + + Q+E + + F + N+ TL LSHNKL L+ L
Sbjct: 415 LEPEIFSDL---YTLQILNLRHNQLENIAADTFAPMNNLH--TLLLSHNKLKYLDAYALN 469
Query: 118 S-NVTKLQHLGTTIL----KDREKXXXXXXXXXXRCNKITDLNGNL--FRHLQKSIVKAK 170
V L L L D + N++ + L RHL +++ +
Sbjct: 470 GLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALRNMRHL-RTVDLGE 528
Query: 171 KNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELN 230
ED K N + ++ + FR L NLQ L+L+ N++ ++E
Sbjct: 529 NMITVMEDSAF---KGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVE-- 583
Query: 231 SNVFDVFEKLQLLEISFSLFNS-----NEFPYYI-LNKNLN------------TLEWLAM 272
F++ +Q + + + N + P + LN + N TL+WL +
Sbjct: 584 PGAFEMTSSIQAVRLDGNELNDINGLFSNMPSLLWLNISDNRLESFDYGHVPSTLQWLDL 643
Query: 273 DNNNIKNIRN-YSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
N + ++ N + L + L +++ +N++ +I + +I ++ + L++N + ++
Sbjct: 644 HKNRLSSLSNRFGLDSELKLQTLDVSFNQLQRIGPS----SIPNSIELLFLNDNLITTVD 699
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
DTF + L + L N I T K+L +L + + + P ++ N
Sbjct: 700 PDTFMHKTNLTRVDLYAN---QITTLDIKSLR-----ILPVWEHRAL-PEFYIG-GNPFT 749
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
D + L+ N +ITS+Q P ++L Y L ++ P+
Sbjct: 750 CDCNIDWLQKIN-----HITSRQYPRIMDLETIYCKLLNNRERAYIPL 792
Score = 140 (54.3 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 92/421 (21%), Positives = 182/421 (43%)
Query: 3 LDLSHNKLSVLNMATLYSNVTK------LQHLGTTILKGDQLQGIFNSKLRELEITGKDL 56
L+LS NK+ L L++ K LQ+ ++L + + +L +
Sbjct: 330 LNLSSNKIVALP-TELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITS 388
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL 116
+ID + F + + L +++ ++ +L +F + ++ L+L HN+L N+A
Sbjct: 389 TWIDKNTFVGLIRL--VLLNLSHNKLTKLEPEIFSDLYTLQ--ILNLRHNQLE--NIAA- 441
Query: 117 YSNVTKLQHLGTTILKDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK---AKKN 172
+ +L T +L + K + L+ N + + A ++
Sbjct: 442 -DTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQD 500
Query: 173 NNNNEDQVSDRE---KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIEL 229
N N +Q+ + N IT + + F+ L NL L L N L+ I +
Sbjct: 501 LNLNGNQLKTVPLALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITM 560
Query: 230 NSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLT 289
++ F LQ+L ++ + E + + ++ + +D N + +I N N+
Sbjct: 561 HT--FRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVR---LDGNELNDI-NGLFSNMP 614
Query: 290 SLNYINLEYNKISKI---H--NNLFHFNIHK-RLKEIRLSNNYLELIESDTFYNLKELNT 343
SL ++N+ N++ H + L ++HK RL LSN + ++S+ LK L T
Sbjct: 615 SLLWLNISDNRLESFDYGHVPSTLQWLDLHKNRLSS--LSNRFG--LDSE----LK-LQT 665
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ +S+N L+ I +S N +L L+ N I + P+ F++ NL ++DL N++ +
Sbjct: 666 LDVSFNQLQRIGPSSIPNSIELL--FLNDNLITTVDPDTFMHKTNLTRVDLYANQITTLD 723
Query: 404 L 404
+
Sbjct: 724 I 724
Score = 124 (48.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
++T E L +D NN + +S +L + + ++ I+N F + KRL + L
Sbjct: 859 MDTSE-LYIDGNNFVELAGHSFLGRKNLAVLYANNSNVAHIYNTTFS-GL-KRLLILHLE 915
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
+N++ +E + F+NL+ L + L N + SI SF+ L + + L N++ +
Sbjct: 916 DNHIISLEGNEFHNLENLRELYLQSNKIASIANGSFQMLRKLEVLRLDGNRLMHFEVWQL 975
Query: 384 VNLPNLVKLDLQDNK 398
P LV++ L DN+
Sbjct: 976 SANPYLVEISLADNQ 990
Score = 111 (44.1 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLD 488
Y ++ P+ L + N E+ + FL +L LY + + + H+ T F L
Sbjct: 850 YSEMPRRVPMDTSELYIDGNNFVELAGHSFLGR--KNLAVLYANNSNVAHIYNTTFSGLK 907
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L +L LE N+I + F + NL+ + L N+I+ + F KL +L + NRL
Sbjct: 908 RLLILHLEDNHIISLEGNEFHNLENLRELYLQSNKIASIANGSFQMLRKLEVLRLDGNRL 967
Query: 549 RSLPR-DVFSNTIIEKLDISYNQ 570
+ +N + ++ ++ NQ
Sbjct: 968 MHFEVWQLSANPYLVEISLADNQ 990
Score = 102 (41.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
NN++EL +F K L + + + + I T+F L +L + L N I + N F
Sbjct: 869 NNFVELA-GHSFLGRKNLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEF 927
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
NL NL +L LQ NK+ F + + L L N + + +E + A Y+
Sbjct: 928 HNLENLRELYLQSNKIASIANGSFQMLRKLEV---LRLDGNRLMH-FEVWQLSANPYLVE 983
Query: 444 LDLSNNR 450
+ L++N+
Sbjct: 984 ISLADNQ 990
Score = 95 (38.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 82/358 (22%), Positives = 146/358 (40%)
Query: 2 TLDLSHNKLSVLNMATLYS-NVTKLQHLGTTILKGDQLQGIFN-SKLRELEITGKDLKFI 59
TL LSHNKL L+ L V L L L G N S L++L + G LK +
Sbjct: 452 TLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTV 511
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
P A N+ + T+ + I + F + N+ L L N L + M T + +
Sbjct: 512 -PLALRNMR--HLRTVDLGENMITVMEDSAFKGLGNL--YGLRLIGNYLENITMHT-FRD 565
Query: 120 VTKLQHLGTT----ILKDREKXXXXXXXXXXRC--NKITDLNGNLFRHLQKSIVKAKKNN 173
+ LQ L + + R N++ D+NG LF ++ S++ ++
Sbjct: 566 LPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDING-LFSNMP-SLLWLNISD 623
Query: 174 NNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNL-FRHLYNLQELSLSFNKLQIIELNSN 232
N E D N+++ L+ LQ L +SFN+LQ I +S
Sbjct: 624 NRLES--FDYGHVPSTLQWLDLHKNRLSSLSNRFGLDSELKLQTLDVSFNQLQRIGPSS- 680
Query: 233 VFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA--MDNNNIKNIRNYSLYNLTS 290
+ ++LL ++ +L + + ++ NL ++ A + +IK++R ++ +
Sbjct: 681 ---IPNSIELLFLNDNLITTVDPDTFMHKTNLTRVDLYANQITTLDIKSLRILPVWEHRA 737
Query: 291 LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
L + N + N + +++ I S Y +++ +T Y K LN +Y
Sbjct: 738 LPEFYIGGNPFTCDCN----IDWLQKINHIT-SRQYPRIMDLETIY-CKLLNNRERAY 789
Score = 95 (38.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K L + +N+ + I + TF LK L + L N + S++ F NL N+ + L N+
Sbjct: 883 KNLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSNK 942
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNL 404
I I +F L L L L N+L F +
Sbjct: 943 IASIANGSFQMLRKLEVLRLDGNRLMHFEV 972
Score = 73 (30.8 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 35/150 (23%), Positives = 63/150 (42%)
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFS--NITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
A+ +P V +D + + N + + ++ L +N+ + ++Y N
Sbjct: 849 AYSEMPRRVPMDTSELYIDGNNFVELAGHSFLGRKNLAVLYANNSNVAHIY-NTTFSGLK 907
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ L L +N I + N ++LR+LYL N+I + +F L LE+L L+ N
Sbjct: 908 RLLILHLEDNHIISLEGNEFHNL-ENLRELYLQSNKIASIANGSFQMLRKLEVLRLDGNR 966
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTG 529
+ P L I L+ N+ S G
Sbjct: 967 LMHFEVWQLSANPYLVEISLADNQWSCECG 996
Score = 63 (27.2 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 28/111 (25%), Positives = 49/111 (44%)
Query: 3 LDLSHNKLSVL---NMATLYS-NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
LD+SHN VL TL V + + G +++ L G+ N L+ L ++ +
Sbjct: 282 LDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKN--LQILNLSSNKIVA 339
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS 109
+ F A + + N I L LF ++ ++ LDLS N+++
Sbjct: 340 LPTELFAE-QAKIIQEVYLQNNSISVLNPQLFSNLDQLQ--ALDLSMNQIT 387
Score = 43 (20.2 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 14 NMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFI------DPSAFDNI 67
+++T + +L H + + G+ G+ NS+L + + L+ + DPS +D
Sbjct: 23 SLSTKHHQQQQLSH--SNAIMGEA--GVSNSQLMQPSTPARTLRPLTAGAGGDPSLYDAP 78
Query: 68 DACY 71
D C+
Sbjct: 79 DDCH 82
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 281 (104.0 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 94/315 (29%), Positives = 164/315 (52%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N+I + +L L +NL++N+IS++ + F F ++ L E+ L +N ++ I++D
Sbjct: 86 NSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMN--LTELHLMSNSIQKIKNDP 143
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN--LVKL 392
F NLK L + LS+N L S K + L N+ ++LS N+I + P F L N L +L
Sbjct: 144 FKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRL 203
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT-NLYEN-DKKQAPIYIKSLDLSNNR 450
+L N++K+F+ F + L+L+N ++ +L E + + I++L LS+N+
Sbjct: 204 ELSSNQIKEFSPGCFHTLGELS---GLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQ 260
Query: 451 IQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+ + F +L L L N ++ + +F L LE LSLE+NNI + R+F
Sbjct: 261 LDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFY 320
Query: 510 GMPNLQIIDL--SFNEISM-LTG----EQFYFSFK--LRILNISHNRLRSLPRDVFSNTI 560
G+ NL+ +DL SF S+ LT + F F + L LN+ N + R+ F+ +
Sbjct: 321 GLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLV 380
Query: 561 -IEKLDISYNQDKIR 574
++ L +S + +R
Sbjct: 381 RLKFLSLSNSFSSLR 395
Score = 245 (91.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 121/500 (24%), Positives = 210/500 (42%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS----NVTKLQHLGTTI 130
L +T+ Q+ LP F + + TLD N +S L S + LQH +
Sbjct: 57 LNLTHNQLRRLPPANFTRYSQLT--TLDGGFNSISKLEPELCQSLPWLEILNLQHNEISQ 114
Query: 131 LKDREKXX-XXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXX 189
L D+ N I + + F++L K+++K ++N +
Sbjct: 115 LSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNL-KNLIKLDLSHNGLSSTKLGTQLQLEN 173
Query: 190 XXXXXXRCNKITDLNGNLFRHLYN--LQELSLSFNKLQIIELNSNVFDVFEKLQLLEISF 247
NKI+ L F L N L+ L LS N QI E + F +L L ++
Sbjct: 174 LQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSN--QIKEFSPGCFHTLGELSGLSLNN 231
Query: 248 SLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL--TSLNYINLEYNKISKIH 305
+ + + L + ++E L++ +N + I + + L T+L ++L N + +
Sbjct: 232 AKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMG 291
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK-SIKTTSFKNLNN 364
N+ F + H L+ + L N +E + S +FY L L + L + + SI TS +++
Sbjct: 292 NDSFAWLPH--LEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDD 349
Query: 365 M----LNIVLSFNQIKYIYP----NAFVNLPNLVKLDLQDN--KLKDFNLNVFSNITSKQ 414
L + N +P N F L L L L ++ L+ F ++
Sbjct: 350 FSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCP 409
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI-QEVPVNFLQTFADSLRKLYLDF 473
+ L+L+ N I+ + +++ LDL N I QE+ + D++ ++YL +
Sbjct: 410 LLL-LDLTKNKISKIQSGAFSWLG-HLEVLDLGLNEIGQELTGQEWRGL-DNIVEIYLSY 466
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVV--VKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N+ L +F ++ L+ L L + V F +PNL I+DLS N I+ + E
Sbjct: 467 NKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDEL 526
Query: 532 FYFSFKLRILNISHNRLRSL 551
KL IL++ HN L L
Sbjct: 527 LKGLEKLEILDLQHNNLARL 546
Score = 240 (89.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 140/598 (23%), Positives = 251/598 (41%)
Query: 2 TLDLSHNKLSVLNMATLYS----NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLK 57
TLD N +S L S + LQH + L IF L EL + ++
Sbjct: 80 TLDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTF--IFCMNLTELHLMSNSIQ 137
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY 117
I F N+ L L +L + L ++EN++++ L S+NK+S L
Sbjct: 138 KIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQL--QLENLQELLL--SNNKISSLTPG--- 190
Query: 118 SNVTKLQHLGTTILKDREKXXXXXXXXXXRC-NKITDLNGNLFRHLQKSIVKAKKNNNNN 176
+ LG + LK E C + + +L+G S+ AK + +
Sbjct: 191 ----EFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSG-------LSLNNAKLSPSLT 239
Query: 177 EDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLY--NLQELSLSFNKLQIIELNSNVF 234
E + N++ ++ F L NL L LS N L++ + ++ F
Sbjct: 240 EKLCLELSNTSIENLSLSS--NQLDTISHTTFDGLKQTNLTTLDLSRNSLRV--MGNDSF 295
Query: 235 DVFEKLQLLEISFS-LFNSNEFPYYILNKNLNTLEWL------AMDNNNIKNIRNYSLYN 287
L+ L + ++ + + + +Y L+ NL L+ ++ ++ I ++S
Sbjct: 296 AWLPHLEYLSLEYNNIEHLSSRSFYGLS-NLRRLDLRRSFTRQSISLTSLPKIDDFSFQW 354
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY--LELIESDTFYNLK--ELNT 343
L L Y+N++ N I N F + RLK + LSN++ L + ++TF +L L
Sbjct: 355 LKCLEYLNMDDNNFPGIKRNTFTGLV--RLKFLSLSNSFSSLRTLTNETFLSLAGCPLLL 412
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI-KYIYPNAFVNLPNLVKLDLQDNKLKDF 402
+ L+ N + I++ +F L ++ + L N+I + + + L N+V++ L NK +
Sbjct: 413 LDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLEL 472
Query: 403 NLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI-YIKSLDLSNNRIQEVPVNFLQT 461
N F+++ S Q L L + N+ + P+ + LDLSNN I + L+
Sbjct: 473 TTNSFTSVPSLQ---RLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKG 529
Query: 462 FADSLRKLYLDFNEIKHL--DATAFGNLDVLE------LLSLEHNNIAVVVKRTFIGMPN 513
+ L L L N + L A G + L+ +L+L N + F +
Sbjct: 530 L-EKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRE 588
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI--IEKLDISYN 569
L+ IDL N +++L F L+ L++ N + S+ + VF + LD+ +N
Sbjct: 589 LKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFN 646
Score = 210 (79.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 98/384 (25%), Positives = 171/384 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDV-FEKLQLLEISFSLFNSNEFP 256
N I+ L L + L L+ L+L N++ + + +F + +L L+ S ++ F
Sbjct: 86 NSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPF- 144
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
KNL L L + +N + + + + L +L + L NKIS + F F +
Sbjct: 145 -----KNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGNSS 199
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSY-NLLKSIKTTSFKNLNN--MLNIVLSFN 373
LK + LS+N ++ F+ L EL+ ++L+ L S+ L+N + N+ LS N
Sbjct: 200 LKRLELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSN 259
Query: 374 QIKYIYPNAFVNLP--NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
Q+ I F L NL LDL N L+ + F+ + + L+L N I +L
Sbjct: 260 QLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEY---LSLEYNNIEHLSS 316
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
Y LSN R ++ +F + + + +D +F L LE
Sbjct: 317 RS-----FY----GLSNLRRLDLRRSFTRQS--------ISLTSLPKIDDFSFQWLKCLE 359
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLS--FNEISMLTGEQFYF--SFKLRILNISHNR 547
L+++ NN + + TF G+ L+ + LS F+ + LT E F L +L+++ N+
Sbjct: 360 YLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLDLTKNK 419
Query: 548 LRSLPRDVFSNT-IIEKLDISYNQ 570
+ + FS +E LD+ N+
Sbjct: 420 ISKIQSGAFSWLGHLEVLDLGLNE 443
Score = 205 (77.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 75/295 (25%), Positives = 135/295 (45%)
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
T++ +NL +N++ ++ +F + +L + N + +E + +L L + L +
Sbjct: 52 TNITVLNLTHNQLRRLPPA--NFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQH 109
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N + + +F N+ + L N I+ I + F NL NL+KLDL N L L
Sbjct: 110 NEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQL 169
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKK-QAPIYIKSLDLSNNRIQEVPVNFLQTFAD--- 464
+ + Q L LSNN I++L + +K L+LS+N+I+E T +
Sbjct: 170 QLENLQ---ELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSG 226
Query: 465 -SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP--NLQIIDLSF 521
SL L + + L N + E LSL N + + TF G+ NL +DLS
Sbjct: 227 LSLNNAKLSPSLTEKL-CLELSNTSI-ENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSR 284
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLP-RDVFSNTIIEKLDI--SYNQDKI 573
N + ++ + F + L L++ +N + L R + + + +LD+ S+ + I
Sbjct: 285 NSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSI 339
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 39/114 (34%), Positives = 59/114 (51%)
Query: 438 PIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
P I L+L++N+++ +P NF T L L FN I L+ +L LE+L+L+
Sbjct: 51 PTNITVLNLTHNQLRRLPPANF--TRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQ 108
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
HN I+ + +TFI NL + L N I + + F L L++SHN L S
Sbjct: 109 HNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSS 162
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 40/161 (24%), Positives = 78/161 (48%)
Query: 412 SKQTPMNLNLSNNYITN--LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
S+ P +++ + +T L + + + + D S+ ++ ++P + L T ++ L
Sbjct: 2 SRPLPYHIHFFSGLLTCWILCTSSAHKCTVRHEVADCSHLKLTQIPDD-LPT---NITVL 57
Query: 470 YLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG 529
L N+++ L F L L N+I+ + +P L+I++L NEIS L+
Sbjct: 58 NLTHNQLRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSD 117
Query: 530 EQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ F F L L++ N ++ + D F N + KLD+S+N
Sbjct: 118 KTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHN 158
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 281 (104.0 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 94/315 (29%), Positives = 164/315 (52%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N+I + +L L +NL++N+IS++ + F F ++ L E+ L +N ++ I++D
Sbjct: 86 NSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMN--LTELHLMSNSIQKIKNDP 143
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN--LVKL 392
F NLK L + LS+N L S K + L N+ ++LS N+I + P F L N L +L
Sbjct: 144 FKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRL 203
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT-NLYEN-DKKQAPIYIKSLDLSNNR 450
+L N++K+F+ F + L+L+N ++ +L E + + I++L LS+N+
Sbjct: 204 ELSSNQIKEFSPGCFHTLGELS---GLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQ 260
Query: 451 IQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+ + F +L L L N ++ + +F L LE LSLE+NNI + R+F
Sbjct: 261 LDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFY 320
Query: 510 GMPNLQIIDL--SFNEISM-LTG----EQFYFSFK--LRILNISHNRLRSLPRDVFSNTI 560
G+ NL+ +DL SF S+ LT + F F + L LN+ N + R+ F+ +
Sbjct: 321 GLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLV 380
Query: 561 -IEKLDISYNQDKIR 574
++ L +S + +R
Sbjct: 381 RLKFLSLSNSFSSLR 395
Score = 245 (91.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 123/501 (24%), Positives = 211/501 (42%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATLYS----NVTKLQHLGTT 129
L +T+ Q+ LP F + Q+T LD N +S L S + LQH +
Sbjct: 57 LNLTHNQLRRLPPANFTRYS---QLTILDGGFNSISKLEPELCQSLPWLEILNLQHNEIS 113
Query: 130 ILKDREKXX-XXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXX 188
L D+ N I + + F++L K+++K ++N +
Sbjct: 114 QLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNL-KNLIKLDLSHNGLSSTKLGTQLQLE 172
Query: 189 XXXXXXXRCNKITDLNGNLFRHLYN--LQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS 246
NKI+ L F L N L+ L LS N QI E + F +L L ++
Sbjct: 173 NLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSN--QIKEFSPGCFHTLGELSGLSLN 230
Query: 247 FSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL--TSLNYINLEYNKISKI 304
+ + + L + ++E L++ +N + I + + L T+L ++L N + +
Sbjct: 231 NAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVM 290
Query: 305 HNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK-SIKTTSFKNLN 363
N+ F + H L+ + L N +E + S +FY L L + L + + SI TS ++
Sbjct: 291 GNDSFAWLPH--LEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKID 348
Query: 364 NM----LNIVLSFNQIKYIYP----NAFVNLPNLVKLDLQDN--KLKDFNLNVFSNITSK 413
+ L + N +P N F L L L L ++ L+ F ++
Sbjct: 349 DFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGC 408
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI-QEVPVNFLQTFADSLRKLYLD 472
+ LNL+ N I+ + +++ LDL N I QE+ + D++ ++YL
Sbjct: 409 PLLL-LNLTKNKISKIQSGAFSWLG-HLEVLDLGLNEIGQELTGQEWRGL-DNIVEIYLS 465
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVV--VKRTFIGMPNLQIIDLSFNEISMLTGE 530
+N+ L +F ++ L+ L L + V F +PNL I+DLS N I+ + E
Sbjct: 466 YNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDE 525
Query: 531 QFYFSFKLRILNISHNRLRSL 551
KL IL++ HN L L
Sbjct: 526 LLKGLEKLEILDLQHNNLARL 546
Score = 235 (87.8 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 139/597 (23%), Positives = 250/597 (41%)
Query: 3 LDLSHNKLSVLNMATLYS----NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
LD N +S L S + LQH + L IF L EL + ++
Sbjct: 81 LDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTF--IFCMNLTELHLMSNSIQK 138
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
I F N+ L L +L + L ++EN++++ L S+NK+S L
Sbjct: 139 IKNDPFKNLKNLIKLDLSHNGLSSTKLGTQL--QLENLQELLL--SNNKISSLTPE---- 190
Query: 119 NVTKLQHLGTTILKDREKXXXXXXXXXXRC-NKITDLNGNLFRHLQKSIVKAKKNNNNNE 177
+ LG + LK E C + + +L+G S+ AK + + E
Sbjct: 191 ---EFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSG-------LSLNNAKLSPSLTE 240
Query: 178 DQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLY--NLQELSLSFNKLQIIELNSNVFD 235
+ N++ ++ F L NL L LS N L++ + ++ F
Sbjct: 241 KLCLELSNTSIENLSLSS--NQLDTISHTTFDGLKQTNLTTLDLSRNSLRV--MGNDSFA 296
Query: 236 VFEKLQLLEISFS-LFNSNEFPYYILNKNLNTLEWL------AMDNNNIKNIRNYSLYNL 288
L+ L + ++ + + + +Y L+ NL L+ ++ ++ I ++S L
Sbjct: 297 WLPHLEYLSLEYNNIEHLSSRSFYGLS-NLRRLDLRRSFTRQSISLTSLPKIDDFSFQWL 355
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY--LELIESDTFYNLK--ELNTI 344
L Y+N++ N I N F + RLK + LSN++ L + ++TF +L L +
Sbjct: 356 KCLEYLNMDDNNFPGIKRNTFTGLV--RLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLL 413
Query: 345 TLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI-KYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
L+ N + I++ +F L ++ + L N+I + + + L N+V++ L NK +
Sbjct: 414 NLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELT 473
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI-YIKSLDLSNNRIQEVPVNFLQTF 462
N F+++ S Q L L + N+ + P+ + LDLSNN I + L+
Sbjct: 474 TNSFTSVPSLQ---RLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKGL 530
Query: 463 ADSLRKLYLDFNEIKHL--DATAFGNLDVLE------LLSLEHNNIAVVVKRTFIGMPNL 514
+ L L L N + L A G + L+ +L+L N + F + L
Sbjct: 531 -EKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLREL 589
Query: 515 QIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI--IEKLDISYN 569
+ IDL N +++L F L+ L++ N + S+ + VF + LD+ +N
Sbjct: 590 KSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFN 646
Score = 215 (80.7 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 99/384 (25%), Positives = 171/384 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDV-FEKLQLLEISFSLFNSNEFP 256
N I+ L L + L L+ L+L N++ + + +F + +L L+ S ++ F
Sbjct: 86 NSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPF- 144
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
KNL L L + +N + + + + L +L + L NKIS + F F +
Sbjct: 145 -----KNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSS 199
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSY-NLLKSIKTTSFKNLNN--MLNIVLSFN 373
LK + LS+N ++ F+ L EL+ ++L+ L S+ L+N + N+ LS N
Sbjct: 200 LKRLELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSN 259
Query: 374 QIKYIYPNAFVNLP--NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
Q+ I F L NL LDL N L+ + F+ + + L+L N I +L
Sbjct: 260 QLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEY---LSLEYNNIEHLSS 316
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
Y LSN R ++ +F + + + +D +F L LE
Sbjct: 317 RS-----FY----GLSNLRRLDLRRSFTRQS--------ISLTSLPKIDDFSFQWLKCLE 359
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLS--FNEISMLTGEQFYF--SFKLRILNISHNR 547
L+++ NN + + TF G+ L+ + LS F+ + LT E F L +LN++ N+
Sbjct: 360 YLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLNLTKNK 419
Query: 548 LRSLPRDVFSNT-IIEKLDISYNQ 570
+ + FS +E LD+ N+
Sbjct: 420 ISKIQSGAFSWLGHLEVLDLGLNE 443
Score = 133 (51.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 68/265 (25%), Positives = 114/265 (43%)
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
L I D N+ LN L++N L+ + +F + + + FN I + P +L
Sbjct: 43 LTQIPDDLPTNITVLN---LTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSL 99
Query: 387 PNLVKLDLQDNKLKDFNLNVF---SNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
P L L+LQ N++ + F N+T L+L +N I + + K IK
Sbjct: 100 PWLEILNLQHNEISQLSDKTFIFCMNLTE------LHLMSNSIQKIKNDPFKNLKNLIK- 152
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF---GNLDVLELLSLEHNNI 500
LDLS+N + + Q ++L++L L N+I L F GN L+ L L N I
Sbjct: 153 LDLSHNGLSSTKLG-TQLQLENLQELLLSNNKISSLTPEEFDFLGNSS-LKRLELSSNQI 210
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK---LRILNISHNRLRSLPRDVFS 557
F + L + L+ ++S E+ + L++S N+L ++ F
Sbjct: 211 KEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFD 270
Query: 558 N---TIIEKLDISYNQDKIRPGRES 579
T + LD+S N ++ G +S
Sbjct: 271 GLKQTNLTTLDLSRNSLRVM-GNDS 294
Score = 127 (49.8 bits), Expect = 0.00022, P = 0.00022
Identities = 40/161 (24%), Positives = 79/161 (49%)
Query: 412 SKQTPMNLNLSNNYITN--LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
S+ P +++ + +T L + + + + D S+ ++ ++P + L T ++ L
Sbjct: 2 SRPLPYHIHFFSGLLTCWILCTSSAHKCTVRHEVADCSHLKLTQIPDD-LPT---NITVL 57
Query: 470 YLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG 529
L N+++ L F L +L N+I+ + +P L+I++L NEIS L+
Sbjct: 58 NLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSD 117
Query: 530 EQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ F F L L++ N ++ + D F N + KLD+S+N
Sbjct: 118 KTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHN 158
>FB|FBgn0034476 [details] [associations]
symbol:Toll-7 "Toll-7" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISS;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0002752 "cell surface pattern recognition
receptor signaling pathway" evidence=IC] [GO:0008329 "pattern
recognition receptor activity" evidence=IC] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0046790 "virion binding"
evidence=IDA] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0010508 "positive regulation of autophagy"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 EMBL:AE013599
GO:GO:0016021 GO:GO:0009897 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0010508 GO:GO:0051607
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0008329
GO:GO:0046790 GO:GO:0002752 GeneTree:ENSGT00700000104442
SUPFAM:SSF52200 FlyBase:FBgn0034476 EMBL:AF247765
RefSeq:NP_523797.1 UniGene:Dm.2660 SMR:Q7KIN0
EnsemblMetazoa:FBtr0086336 GeneID:37272 KEGG:dme:Dmel_CG8595
UCSC:CG8595-RA CTD:37272 InParanoid:Q7KIN0 OMA:NHAFIGR
GenomeRNAi:37272 NextBio:802851 Uniprot:Q7KIN0
Length = 1446
Score = 282 (104.3 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 144/550 (26%), Positives = 240/550 (43%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPS-GLF-DKIENIEQMT-LD 102
L L + L + +AF+ + L L N++ + LF D + ++Q+T LD
Sbjct: 136 LEALRLDSCKLLQLPNNAFEGLATLKSLRLSTHNSEWGPTRTLELFPDSLGGLKQLTDLD 195
Query: 103 LSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCN----------KIT 152
L N L L L V LQ L T ++R + C ++
Sbjct: 196 LGDNNLRQLPSGFLCP-VGNLQVLNLT--RNRIRTAEQMGFADMNCGAGSGSAGSELQVL 252
Query: 153 DLNGNLFRHLQKS--IVKAKKNNN-----NNEDQVSDREKXXXXXXXXXXRCNK-ITDLN 204
D + N R + +S I + ++ + NN ++S N + L
Sbjct: 253 DASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETLP 312
Query: 205 GNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNL 264
LF L+E+ L N+L EL +F E+L ++++S + SN L
Sbjct: 313 EGLFAGSKELREIHLQQNELY--ELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTF-AGL 369
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH--FNIHKRLKEIRL 322
L L + +N + I + L L +NL N I I +N F +N+H + L
Sbjct: 370 IRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHT----LNL 425
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
+ N L ++ F L L+ +TL+ NL+ ++ FKN +++ + LS NQ+ + P A
Sbjct: 426 AENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEV-PRA 484
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
+L L LDL +N+++ F+ F N+ + T L L +N I N+ + P +
Sbjct: 485 LQDLAMLRTLDLGENQIRTFDNQSFKNL-HQLT--GLRLIDNQIGNITVGMFQDLP-RLS 540
Query: 443 SLDLSNNRIQEVPV-NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
L+L+ NRIQ + +F + F L + LD N + ++ F L L L+L N++
Sbjct: 541 VLNLAKNRIQSIERGSFDKNF--ELEAIRLDRNFLADINGV-FATLVSLLWLNLSENHL- 596
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI--LNISHNRLRSLPRDVFSNT 559
V FI NL+ +D+ N I L G + ++R+ L+ SHNR+ + NT
Sbjct: 597 VWFDYAFIPS-NLKWLDIHGNYIEAL-GNYYKLQEEIRVKTLDASHNRITEIGPMSIPNT 654
Query: 560 IIEKLDISYN 569
I E L I+ N
Sbjct: 655 I-ELLFINNN 663
Score = 231 (86.4 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 126/506 (24%), Positives = 226/506 (44%)
Query: 10 LSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS-AFDNID 68
L VLN+ + + + +G + G S+L+ L+ + +L+ I S +
Sbjct: 215 LQVLNLTR--NRIRTAEQMGFADMNCGAGSGSAGSELQVLDASHNELRSISESWGISRLR 272
Query: 69 ACYDLTLKITNTQIEELPSGLFDKIENIEQMTL-DLSHNKLSVLNMATLYSNVTKLQ--H 125
L L N + EL SG + + + + + +LS+N L L L++ +L+ H
Sbjct: 273 RLQHLNLAYNN--LSEL-SG--EALAGLASLRIVNLSNNHLETLPEG-LFAGSKELREIH 326
Query: 126 LGTTILKDREKXXXXXXXXXXRCNKITDLNGNLF--RHLQKS----IVKAKKNN--NNNE 177
L L + K + DL+GN H+ + +++ N +N
Sbjct: 327 LQQNELYELPKGLFHRLEQLL----VVDLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNAL 382
Query: 178 DQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDV 236
++ R K R N I + N F LYNL L+L+ N+L L+ +F+
Sbjct: 383 TRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHT--LDDKLFNG 440
Query: 237 FEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL 296
L L ++ +L + E + KN + L+ L + +N + + +L +L L ++L
Sbjct: 441 LYVLSKLTLNNNLISVVEPAVF---KNCSDLKELDLSSNQLNEVPR-ALQDLAMLRTLDL 496
Query: 297 EYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKT 356
N+I N F N+H+ L +RL +N + I F +L L+ + L+ N ++SI+
Sbjct: 497 GENQIRTFDNQSFK-NLHQ-LTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSIER 554
Query: 357 TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTP 416
SF + I L N + I F L +L+ L+L +N L F+ ++ I S
Sbjct: 555 GSFDKNFELEAIRLDRNFLADIN-GVFATLVSLLWLNLSENHLVWFD---YAFIPSNLKW 610
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNE 475
++++ NYI L K Q I +K+LD S+NRI E+ P++ T + L+++ N
Sbjct: 611 LDIH--GNYIEALGNYYKLQEEIRVKTLDASHNRITEIGPMSIPNT----IELLFINNNL 664
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIA 501
I ++ AF + L + L N ++
Sbjct: 665 IGNVQPNAFVDKANLARVDLYANQLS 690
Score = 215 (80.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 121/468 (25%), Positives = 196/468 (41%)
Query: 97 EQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNG 156
E LD SHN+L ++ + S + +LQHL E +I +L+
Sbjct: 248 ELQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASL--RIVNLSN 305
Query: 157 NLFRHLQKSIVKAKKNNNN---NEDQVSDREKXXXXXXXXXXRC----NKITD--LNGNL 207
N L + + K ++++ + K N++T ++
Sbjct: 306 NHLETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTT 365
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI---SFSLFNSNEF-PYYILNKN 263
F L L L+L+ N L I+ + F LQ+L + S N F P Y N
Sbjct: 366 FAGLIRLIVLNLAHNALTRIDYRT--FKELYFLQILNLRNNSIGHIEDNAFLPLY----N 419
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
L+TL LA N + + + L+N L L+ + L N IS + +F N LKE+ L
Sbjct: 420 LHTLN-LA--ENRLHTLDD-KLFNGLYVLSKLTLNNNLISVVEPAVFK-NCSD-LKELDL 473
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S+N L + +L L T+ L N +++ SFKNL+ + + L NQI I
Sbjct: 474 SSNQLNEVPR-ALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGM 532
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFS-NITSKQTPMNLN----LSNNYIT-------NLY 430
F +LP L L+L N+++ F N + ++ N ++ + T NL
Sbjct: 533 FQDLPRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADINGVFATLVSLLWLNLS 592
Query: 431 EN-----DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD--FNEIKHLDATA 483
EN D P +K LD+ N I+ + N+ + + +R LD N I + +
Sbjct: 593 ENHLVWFDYAFIPSNLKWLDIHGNYIEALG-NYYK-LQEEIRVKTLDASHNRITEIGPMS 650
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N +ELL + +N I V F+ NL +DL N++S L +Q
Sbjct: 651 IPN--TIELLFINNNLIGNVQPNAFVDKANLARVDLYANQLSKLQLQQ 696
Score = 209 (78.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 113/471 (23%), Positives = 198/471 (42%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTI-----LKGDQLQGIFNSKLRELEITGKDLK 57
LD SHN+L ++ + S + +LQHL L G+ L G+ + LR + ++ L+
Sbjct: 252 LDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGL--ASLRIVNLSNNHLE 309
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMA-TL 116
+ F ++ L+ ++ ELP GLF ++E + + +DLS N+L+ ++ T
Sbjct: 310 TLPEGLFAGSKELREIHLQ--QNELYELPKGLFHRLEQL--LVVDLSGNQLTSNHVDNTT 365
Query: 117 YSN-----VTKLQHLGTTILKDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLQK--SIVK 168
++ V L H T + R K R N I + N F L ++
Sbjct: 366 FAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNL 425
Query: 169 AKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIE 228
A+ + +D++ + N I+ + +F++ +L+EL LS N+L +
Sbjct: 426 AENRLHTLDDKLFN---GLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVP 482
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
+ L L E F++ F KNL+ L L + +N I NI +L
Sbjct: 483 RALQDLAMLRTLDLGENQIRTFDNQSF------KNLHQLTGLRLIDNQIGNITVGMFQDL 536
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
L+ +NL N+I I F N L+ IRL N+L I F L L + LS
Sbjct: 537 PRLSVLNLAKNRIQSIERGSFDKNFE--LEAIRLDRNFLADING-VFATLVSLLWLNLSE 593
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK---LDLQDNKLKDFNLN 405
N L + N+ + + N I+ + + L ++ LD N++ +
Sbjct: 594 NHLVWFDYAFIPS--NLKWLDIHGNYIEAL--GNYYKLQEEIRVKTLDASHNRITEIGPM 649
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
N T + +N NL N N + + A + + + LS ++Q++ V
Sbjct: 650 SIPN-TIELLFINNNLIGNVQPNAFVDKANLARVDLYANQLSKLQLQQLRV 699
Score = 204 (76.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 84/340 (24%), Positives = 158/340 (46%)
Query: 249 LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLE-YN-KISKIHN 306
LF S P + + L TLE L +D+ + + N + L +L + L +N +
Sbjct: 120 LFEST-LPVAVFAR-LQTLEALRLDSCKLLQLPNNAFEGLATLKSLRLSTHNSEWGPTRT 177
Query: 307 -NLFHFNIH--KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
LF ++ K+L ++ L +N L + S + L + L+ N +++ + F ++N
Sbjct: 178 LELFPDSLGGLKQLTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNRIRTAEQMGFADMN 237
Query: 364 ---------NMLNIV-LSFNQIKYIYPNAFVN-LPNLVKLDLQDNKLKDFNLNVFSNITS 412
+ L ++ S N+++ I + ++ L L L+L N L + + + + S
Sbjct: 238 CGAGSGSAGSELQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLAS 297
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
+ +NLSNN++ L E + ++ + L N + E+P + L + L
Sbjct: 298 LRI---VNLSNNHLETLPEGLFAGSK-ELREIHLQQNELYELPKGLFHRL-EQLLVVDLS 352
Query: 473 FNEI--KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
N++ H+D T F L L +L+L HN + + RTF + LQI++L N I +
Sbjct: 353 GNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDN 412
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYN 569
F + L LN++ NRL +L +F+ ++ KL ++ N
Sbjct: 413 AFLPLYNLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNN 452
Score = 118 (46.6 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 92/426 (21%), Positives = 182/426 (42%)
Query: 24 KLQHLGTTILKGDQLQG--IFNS------KLRELEITGKDLKFIDPSAFDNIDACYDLT- 74
+L+ L L G+QL + N+ +L L + L ID F + Y L
Sbjct: 342 RLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKEL---YFLQI 398
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDR 134
L + N I + F + N+ TL+L+ N+L L+ L++ + L L T+ +
Sbjct: 399 LNLRNNSIGHIEDNAFLPLYNLH--TLNLAENRLHTLD-DKLFNGLYVLSKL--TL--NN 451
Query: 135 EKXXXXXXXXXXRCN--KITDLNGNLFRHLQKSI--VKAKKNNNNNEDQVS--DREKXXX 188
C+ K DL+ N + +++ + + + E+Q+ D +
Sbjct: 452 NLISVVEPAVFKNCSDLKELDLSSNQLNEVPRALQDLAMLRTLDLGENQIRTFDNQSFKN 511
Query: 189 XXXXXXXRC--NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS 246
R N+I ++ +F+ L L L+L+ N++Q IE S FD +L+ + +
Sbjct: 512 LHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGS--FDKNFELEAIRLD 569
Query: 247 FSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN 306
+ + L +L WL + N++ +Y+ ++L ++++ N I +
Sbjct: 570 RNFLADINGVF----ATLVSLLWLNLSENHLVWF-DYAFIP-SNLKWLDIHGNYIEAL-G 622
Query: 307 NLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNML 366
N + R+K + S+N + I + N EL + ++ NL+ +++ +F + N+
Sbjct: 623 NYYKLQEEIRVKTLDASHNRITEIGPMSIPNTIEL--LFINNNLIGNVQPNAFVDKANLA 680
Query: 367 NIVLSFNQIKYIYPN----AFVNLPN-LVKLDLQDNKLK-DFN---LNVFSNITSKQTPM 417
+ L NQ+ + A V P L + L N + D L +N+T++Q P
Sbjct: 681 RVDLYANQLSKLQLQQLRVAPVVAPKPLPEFYLGGNPFECDCTMDWLQRINNLTTRQHPR 740
Query: 418 NLNLSN 423
++++N
Sbjct: 741 VMDMAN 746
Score = 95 (38.5 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT 528
+YLD N L AF L L + + +A + RTF + +LQ++ L+ N++ L
Sbjct: 834 VYLDGNNFPVLKNHAFIGRKNLRALYVNGSQVAAIQNRTFASLASLQLLHLADNKLRTLH 893
Query: 529 GEQFYFSFKLRILNISHNRLRSL 551
G +F LR L + +N+L ++
Sbjct: 894 GYEFEQLSALRELYLQNNQLTTI 916
Score = 77 (32.2 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 465 SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
+LR LY++ +++ + F +L L+LL L N + + F + L+ + L N++
Sbjct: 854 NLRALYVNGSQVAAIQNRTFASLASLQLLHLADNKLRTLHGYEFEQLSALRELYLQNNQL 913
Query: 525 SMLTGEQFYFSFKLRILNISHNRLRSLP 552
+ + L ++ I NRL +LP
Sbjct: 914 TTIENATLAPLAALELIRIDGNRLVTLP 941
>FB|FBgn0052055 [details] [associations]
symbol:CG32055 species:7227 "Drosophila melanogaster"
[GO:0016942 "insulin-like growth factor binding protein complex"
evidence=ISS] [GO:0005520 "insulin-like growth factor binding"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014296
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 HSSP:Q9BZR6 InterPro:IPR026906
Pfam:PF13306 RefSeq:NP_729599.1 UniGene:Dm.27841
ProteinModelPortal:Q9VT89 SMR:Q9VT89 IntAct:Q9VT89 MINT:MINT-901114
EnsemblMetazoa:FBtr0076304 GeneID:39188 KEGG:dme:Dmel_CG32055
UCSC:CG32055-RA FlyBase:FBgn0052055 InParanoid:Q9VT89 OMA:LHSNWLE
OrthoDB:EOG4XD26B PhylomeDB:Q9VT89 GenomeRNAi:39188 NextBio:812398
ArrayExpress:Q9VT89 Bgee:Q9VT89 Uniprot:Q9VT89
Length = 534
Score = 277 (102.6 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 87/304 (28%), Positives = 147/304 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I + N FRH+ NL+ L L+ N + I L N L+ L IS + N +F +
Sbjct: 156 NLIAVIEPNAFRHMKNLRFLDLTTNYQENITLGENA-----NLRFLSISNN--NLRDFQW 208
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH-KR 316
L + L LE L + +N ++++ Y L +L +N+ N + +I LF
Sbjct: 209 CHL-RVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLNVSNNNLFEIKRTLFMAPGEIAP 267
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + S+N +++++ F LK+L T+ L N + I +F L+++ + L N+I
Sbjct: 268 LELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKIS 327
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ + F NL L KLDL N ++ L VF ++ + L+LSNNYI +L+
Sbjct: 328 ILPDDVFANLTALEKLDLSKNNIQKLGLRVFGERILRKL-IYLDLSNNYIADLHPLALSS 386
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
P +IK L L NR+ + + L+ L ++ N ++ +D LD L L L
Sbjct: 387 MP-FIKELRLRRNRLVSLDLRMFAPLRQ-LQLLTINENRLEEIDGEILDTLDRLNHLELN 444
Query: 497 HNNI 500
+N +
Sbjct: 445 NNRL 448
Score = 242 (90.2 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 96/376 (25%), Positives = 173/376 (46%)
Query: 199 KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYY 258
++ +L F + + +S+N I+ + + + F L S +L E P
Sbjct: 109 QLDELKSEQFPNPSEMINFDVSYN--DILAITTKLMSGFGNLVYANFSENLIAVIE-PNA 165
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+++ L +L + N +NI +L +L ++++ N + H + +L+
Sbjct: 166 F--RHMKNLRFLDLTTNYQENI---TLGENANLRFLSISNNNLRDFQ--WCHLRVLPKLE 218
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL---SFNQI 375
E+ L +N+LE ++ FY L L + +S N L IK T F + + L S N +
Sbjct: 219 ELHLHSNWLEHLDMGIFYALPNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIV 278
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
K + + F L L L+L N++ + F ++S QT L+L N I+ L +D
Sbjct: 279 KVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQT---LHLQGNKISIL-PDDVF 334
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADS-LRKL-YLDF--NEIKHLDATAFGNLDVLE 491
++ LDLS N IQ++ L+ F + LRKL YLD N I L A ++ ++
Sbjct: 335 ANLTALEKLDLSKNNIQKLG---LRVFGERILRKLIYLDLSNNYIADLHPLALSSMPFIK 391
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N + + R F + LQ++ ++ N + + GE +L L +++NRL L
Sbjct: 392 ELRLRRNRLVSLDLRMFAPLRQLQLLTINENRLEEIDGEILDTLDRLNHLELNNNRLTFL 451
Query: 552 PRDVFSNTIIEKLDIS 567
P S +++ +I+
Sbjct: 452 PDLKSSQNLLQLRNIT 467
Score = 188 (71.2 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 77/313 (24%), Positives = 144/313 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L+TL L + + + L + +L +NL + ++ ++ + F N + + +S
Sbjct: 73 LSTLLQLDLSESGGVTLGEKGLQDFKALQKLNLTHAQLDELKSEQFP-NPSEMIN-FDVS 130
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM--LNIVLSFNQIKYIYPN 381
N + I + L S NL+ I+ +F+++ N+ L++ ++ + + N
Sbjct: 131 YNDILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTTNYQENITLGEN 190
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
A NL L + +N L+DF + ++ L+L +N++ +L P +
Sbjct: 191 A-----NLRFLSISNNNLRDFQ---WCHLRVLPKLEELHLHSNWLEHLDMGIFYALP-NL 241
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--NEIKHLDATAFGNLDVLELLSLEHNN 499
+ L++SNN + E+ + LD+ N +K LD + F L L L+L N
Sbjct: 242 RVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQ 301
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
I + R F+G+ +LQ + L N+IS+L + F L L++S N ++ L VF
Sbjct: 302 INRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRVFGER 361
Query: 560 IIEKL---DISYN 569
I+ KL D+S N
Sbjct: 362 ILRKLIYLDLSNN 374
Score = 169 (64.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 90/432 (20%), Positives = 181/432 (41%)
Query: 26 QHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEEL 85
+H G + +L G+ S L +L+++ + + A L L T+ Q++EL
Sbjct: 58 EHTGIERAEDGELPGL--STLLQLDLSESGGVTLGEKGLQDFKALQKLNL--THAQLDEL 113
Query: 86 PSGLFDKIENIEQMTLDLSHNKLSVLNMATL--YSNVTKLQHLGTTILKDREKXXXXXXX 143
S F E + D+S+N + + + + N+ + ++ E
Sbjct: 114 KSEQFPNPS--EMINFDVSYNDILAITTKLMSGFGNLV-YANFSENLIAVIEPNAFRHMK 170
Query: 144 XXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDL 203
+ T+ N+ ++ +NNN D + N + L
Sbjct: 171 NLRFLDLTTNYQENITLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHL 230
Query: 204 NGNLFRHLYNLQELSLSFNKLQIIELNSNVFDV---FEKLQLLEISFSLFNSNEFPYYIL 260
+ +F L NL+ L++S N L E+ +F L+LL+ S ++ + +
Sbjct: 231 DMGIFYALPNLRVLNVSNNNL--FEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCR 288
Query: 261 NKNLNTLE-WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
K L TL WL N I I + L+SL ++L+ NKIS + +++F N+ L++
Sbjct: 289 LKKLRTLNLWL----NQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFA-NL-TALEK 342
Query: 320 IRLSNNYLELIESDTFYN--LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ LS N ++ + F L++L + LS N + + + ++ + + L N++
Sbjct: 343 LDLSKNNIQKLGLRVFGERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVS 402
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ F L L L + +N+L++ + + + +L L+NN +T L + Q
Sbjct: 403 LDLRMFAPLRQLQLLTINENRLEEIDGEILDTLDRLN---HLELNNNRLTFLPDLKSSQN 459
Query: 438 PIYIKSLDLSNN 449
+ ++++ L N
Sbjct: 460 LLQLRNITLEGN 471
Score = 39 (18.8 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 38 LQGIFNSKLRELEITGKDLKFI-DPSAFDNIDACYDL---TLKITN--TQIEELPSGLFD 91
L G+F L+E E G + +F+ ++ ++K+ N T IE G
Sbjct: 12 LSGVFGKDLQECEDLGNGSYLCREIESFEQLNRYVGKNWKSVKVVNEHTGIERAEDGELP 71
Query: 92 KIENIEQMTLDLSHN 106
+ + Q LDLS +
Sbjct: 72 GLSTLLQ--LDLSES 84
>ZFIN|ZDB-GENE-040220-5 [details] [associations]
symbol:tlr22 "toll-like receptor 22" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-5 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799 GO:GO:0052033
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 EMBL:BC163527
IPI:IPI00898178 RefSeq:NP_001122147.1 UniGene:Dr.30190
ProteinModelPortal:B3DJL6 STRING:B3DJL6 GeneID:403135
KEGG:dre:403135 CTD:403135 HOVERGEN:HBG055859 NextBio:20816896
Uniprot:B3DJL6
Length = 947
Score = 279 (103.3 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 149/587 (25%), Positives = 253/587 (43%)
Query: 3 LDLSHNKLSVLNMATL--YSN--VTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
L+L+ N+L+ ++ L +N V +L +++K + + L+ L ++ L+
Sbjct: 111 LNLASNRLNAVSNGMLRGLTNLLVLRLDRNYISVIKESAFSTLHS--LQVLNLSKNHLRH 168
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSG-LFDKIENIEQMTLDLSHNKLSVLNMAT-L 116
ID + + Y L I + S L K ++++ LDLS+N+ + + +
Sbjct: 169 ID-DVKPVLASLYLEELYIGSNYFNVFNSSELSTKPLSLKR--LDLSNNRFAAFQLTNNI 225
Query: 117 YSNVTKLQ-----HLGTTILKDREKXXXXXXXXXX--RCNKITDLNGNLFRHLQKSIVKA 169
+ + L H GT EK N N+ + ++ K
Sbjct: 226 FPTLNHLDLSYCGHNGTMAWNVTEKSYLASVKTLYFMDVNMSIQTADNVLQSFNNTLNKI 285
Query: 170 KKNNNNNEDQVSDREKXXXXXXXXXXR-CNKITDLNGNLFRHLYNLQELSLSFNKLQIIE 228
+ N N ++ S KI L ++F L EL L N +I
Sbjct: 286 RLNGNVRLNKTSLLLSVCSPMLRVLRLIATKIKHLTNHMFDPCSELSELDLGGN--EISN 343
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
L+ ++F F++L+ L++ + + IL +LE++ + N+I + NL
Sbjct: 344 LSQSMFRGFKQLKKLQLQINKLTRVTNSFQILT----SLEFIDLSRNHIHKLSCNDFANL 399
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL-SNNYLEL--IESDTFYNLKELNTIT 345
T + + L NKIS I + LF ++ K L+ +RL +NN L++ + S+ Y LKEL
Sbjct: 400 TQVKTLYLYSNKISSIRSCLFK-DL-KSLEVLRLGTNNLLKIDDVFSNGPYFLKELQ--- 454
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LSYN L IK+ +F NL + N+ L NQI I AF L NL L L NK+ L
Sbjct: 455 LSYNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLT 514
Query: 406 VFSNITSKQTPM-NLNLSNNYITNLYENDKKQAPIY-----IKSLDLSNNR--IQEVPVN 457
N+ S + NL+L N I+ Y DK + P++ ++ L L + R I ++P N
Sbjct: 515 THPNVFSGMPNLQNLDLFANSISFAY--DKLKYPLFKDLKNLRELSLYSQRRGIGQLPSN 572
Query: 458 FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA---VVVKRTFIGMPNL 514
L+ + SL+ Y+ + L+ F L L L N + + F +PNL
Sbjct: 573 LLEGLS-SLQMFYIGNTNLNQLNPNLFNFTPQLWFLDLSKNALREDDAIPPELFHPIPNL 631
Query: 515 QIIDLS---FNEISMLTGEQFYFSFKLR-----ILNISHNRLRSLPR 553
+ +S ++ L G LR I +++ ++SLPR
Sbjct: 632 TKLIISRTQLRSLNFLLGANLNKLSTLRASGNEIDSVNETLIKSLPR 678
Score = 257 (95.5 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 124/518 (23%), Positives = 217/518 (41%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL--YSN--VTKLQHLGTTI 130
L ++N +I ++ G F + N+ L+L+ N+L+ ++ L +N V +L ++
Sbjct: 87 LNVSNNKISKIQDGAFGSLFNLTD--LNLASNRLNAVSNGMLRGLTNLLVLRLDRNYISV 144
Query: 131 LKDREKXXXXXXX----XXXRCNKITDLNGNLFR-HLQKSIVKAKKNNNNNEDQVSDREK 185
+K+ I D+ L +L++ + + N N ++S +
Sbjct: 145 IKESAFSTLHSLQVLNLSKNHLRHIDDVKPVLASLYLEELYIGSNYFNVFNSSELSTKPL 204
Query: 186 XXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEK-LQLLE 244
R L N+F L +L N + + K L ++
Sbjct: 205 SLKRLDLSNNRFAAF-QLTNNIFPTLNHLDLSYCGHNGTMAWNVTEKSYLASVKTLYFMD 263
Query: 245 ISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS--LNYINLEYNKIS 302
++ S+ ++ +L NTL + + N N++ + L ++ S L + L KI
Sbjct: 264 VNMSIQTADN----VLQSFNNTLNKIRL-NGNVRLNKTSLLLSVCSPMLRVLRLIATKIK 318
Query: 303 KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNL 362
+ N++F + L E+ L N + + F K+L + L N L + T SF+ L
Sbjct: 319 HLTNHMF--DPCSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQINKLTRV-TNSFQIL 375
Query: 363 NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
++ I LS N I + N F NL + L L NK+ +F ++ S + L L
Sbjct: 376 TSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLKSLEV---LRLG 432
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD--SLRKLYLDFNEIKHLD 480
N + + ++ P ++K L LS N++ + + TF + L L L+ N+I ++
Sbjct: 433 TNNLLKI-DDVFSNGPYFLKELQLSYNKLSLIKSH---TFGNLPQLNNLSLEDNQISEIE 488
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRT----FIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
AFG L+ L L L N I T F GMPNLQ +DL N IS + Y F
Sbjct: 489 GYAFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNLDLFANSISFAYDKLKYPLF 548
Query: 537 K----LRILNISHNR--LRSLPRDVFSNTIIEKLDISY 568
K LR L++ R + LP ++ + L + Y
Sbjct: 549 KDLKNLRELSLYSQRRGIGQLPSNLLEG--LSSLQMFY 584
Score = 215 (80.7 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 115/428 (26%), Positives = 191/428 (44%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFN--SKLRELEITGKDLKFIDPSAFD 65
NK S+L ++ S + ++ L T +K +F+ S+L EL++ G ++ + S F
Sbjct: 294 NKTSLL--LSVCSPMLRVLRLIATKIK-HLTNHMFDPCSELSELDLGGNEISNLSQSMFR 350
Query: 66 NIDACYDLTLKITN-TQIEELPSGLFDKIENIEQMTLDLSH-NKLSVLNMA------TLY 117
L L+I T++ + F + ++E + L +H +KLS + A TLY
Sbjct: 351 GFKQLKKLQLQINKLTRV----TNSFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLY 406
Query: 118 SNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDL--NGNLF-RHLQKSIVKA---KK 171
K+ + + + KD K KI D+ NG F + LQ S K K
Sbjct: 407 LYSNKISSIRSCLFKDL-KSLEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKS 465
Query: 172 NNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKL--QIIEL 229
+ N Q+++ N+I+++ G F L NL L LS NK+ + +
Sbjct: 466 HTFGNLPQLNN----------LSLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLTT 515
Query: 230 NSNVFDVFEKLQLLEISFSLFNSNEFPY----YILNKNLNTLEWLAM--DNNNIKNIRNY 283
+ NVF LQ L++ F+ NS F Y Y L K+L L L++ I + +
Sbjct: 516 HPNVFSGMPNLQNLDL-FA--NSISFAYDKLKYPLFKDLKNLRELSLYSQRRGIGQLPSN 572
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL---ELIESDTFYNLKE 340
L L+SL + +++++ NLF+F +L + LS N L + I + F+ +
Sbjct: 573 LLEGLSSLQMFYIGNTNLNQLNPNLFNFT--PQLWFLDLSKNALREDDAIPPELFHPIPN 630
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
L + +S L+S+ NLN + + S N+I + +LP L LDLQ+N
Sbjct: 631 LTKLIISRTQLRSLNFLLGANLNKLSTLRASGNEIDSVNETLIKSLPRLAVLDLQNNTFT 690
Query: 401 -DFNLNVF 407
D N N F
Sbjct: 691 CDCN-NAF 697
Score = 210 (79.0 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 90/352 (25%), Positives = 156/352 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+T + N F+ L +L+ + LS N + +L+ N F +++ L + + +S
Sbjct: 363 NKLTRVT-NSFQILTSLEFIDLSRNHIH--KLSCNDFANLTQVKTLYLYSNKISSIRS-- 417
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L K+L +LE L + NN+ I + L + L YNK+S I ++ F N+ +L
Sbjct: 418 -CLFKDLKSLEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKSHTFG-NL-PQL 474
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLL--KSIKT--TSFKNLNNMLNIVLSFN 373
+ L +N + IE F L+ L ++ LS N + K++ T F + N+ N+ L N
Sbjct: 475 NNLSLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNLDLFAN 534
Query: 374 QIKYIYPNA----FVNLPNLVKLDLQDNK--LKDFNLNVFSNITSKQTPMNLNLSNNYIT 427
I + Y F +L NL +L L + + N+ ++S Q + N +
Sbjct: 535 SISFAYDKLKYPLFKDLKNLRELSLYSQRRGIGQLPSNLLEGLSSLQM---FYIGNTNLN 591
Query: 428 NLYENDKKQAPIYIKSLDLSNNRIQE---VPVNFLQTFADSLRKLYLDFNEIKHLDATAF 484
L N P + LDLS N ++E +P + L KL + +++ L+
Sbjct: 592 QLNPNLFNFTP-QLWFLDLSKNALREDDAIPPELFHPIPN-LTKLIISRTQLRSLNFLLG 649
Query: 485 GNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
NL+ L L N I V + +P L ++DL N + F+ +
Sbjct: 650 ANLNKLSTLRASGNEIDSVNETLIKSLPRLAVLDLQNNTFTCDCNNAFFIDW 701
Score = 204 (76.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 84/332 (25%), Positives = 148/332 (44%)
Query: 242 LLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
+L+ISF+ F + LN LN L++L + NN I I++ + +L +L +NL N++
Sbjct: 62 ILDISFNSFAQIQIED--LNILLN-LQYLNVSNNKISKIQDGAFGSLFNLTDLNLASNRL 118
Query: 302 SKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKN 361
+ + N + + L +RL NY+ +I+ F L L + LS N L+ I
Sbjct: 119 NAVSNGMLRGLTN--LLVLRLDRNYISVIKESAFSTLHSLQVLNLSKNHLRHIDDVKPVL 176
Query: 362 LNNMLN-IVLSFNQIKYIYPNAFVNLP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL 419
+ L + + N + P +L +LDL +N+ F L +NI ++L
Sbjct: 177 ASLYLEELYIGSNYFNVFNSSELSTKPLSLKRLDLSNNRFAAFQLT--NNIFPTLNHLDL 234
Query: 420 NLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
+ + T + +K +K+L + N + N LQ+F ++L K+ L+ N +
Sbjct: 235 SYCGHNGTMAWNVTEKSYLASVKTLYFMDVNMSIQTADNVLQSFNNTLNKIRLNGNVRLN 294
Query: 479 LDATAFGNLD-VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
+ +L +L L I + F L +DL NEIS L+ F +
Sbjct: 295 KTSLLLSVCSPMLRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQ 354
Query: 538 LRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
L+ L + N+L + T +E +D+S N
Sbjct: 355 LKKLQLQINKLTRVTNSFQILTSLEFIDLSRN 386
Score = 180 (68.4 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 101/396 (25%), Positives = 183/396 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQL-LEISF-SLFNSNEF 255
NKI+ + F L+NL +L+L+ N+L + N + + L L L+ ++ S+ + F
Sbjct: 92 NKISKIQDGAFGSLFNLTDLNLASNRLNAVS-NGMLRGLTNLLVLRLDRNYISVIKESAF 150
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN-IH 314
L++L+ L + N++++I + L SL Y+ Y I + N+F+ + +
Sbjct: 151 ------STLHSLQVLNLSKNHLRHIDDVKPV-LASL-YLEELY--IGSNYFNVFNSSELS 200
Query: 315 KR---LKEIRLSNNYLELIE--SDTFYNLKELNTI------TLSYNL-----LKSIKTTS 358
+ LK + LSNN + ++ F L L+ T+++N+ L S+KT
Sbjct: 201 TKPLSLKRLDLSNNRFAAFQLTNNIFPTLNHLDLSYCGHNGTMAWNVTEKSYLASVKTLY 260
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
F ++N ++I + N ++ +F N N ++L+ + LN S + S +PM
Sbjct: 261 FMDVN--MSIQTADNVLQ-----SFNNTLNKIRLN------GNVRLNKTSLLLSVCSPML 307
Query: 419 --LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
L L I +L N + LDL N I + + + F L+KL L N++
Sbjct: 308 RVLRLIATKIKHL-TNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQ-LKKLQLQINKL 365
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
+ +F L LE + L N+I + F + ++ + L N+IS + F
Sbjct: 366 TRV-TNSFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLK 424
Query: 537 KLRILNISHNRLRSLPRDVFSNT--IIEKLDISYNQ 570
L +L + N L + DVFSN +++L +SYN+
Sbjct: 425 SLEVLRLGTNNLLKID-DVFSNGPYFLKELQLSYNK 459
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 89/382 (23%), Positives = 166/382 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFP 256
N++ ++ + R L NL L L N + +I+ + F LQ+L +S + L + ++
Sbjct: 116 NRLNAVSNGMLRGLTNLLVLRLDRNYISVIK--ESAFSTLHSLQVLNLSKNHLRHIDDVK 173
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKIS--KIHNNLFHFNIH 314
+ + L L ++ + N+ N S L SL ++L N+ + ++ NN+F H
Sbjct: 174 PVLASLYLEEL-YIGSNYFNVFNSSELSTKPL-SLKRLDLSNNRFAAFQLTNNIFPTLNH 231
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTIT-LSYNLLKSIKTTS--FKNLNNMLNIVLS 371
L N + ++ Y L + T+ + N+ SI+T ++ NN LN +
Sbjct: 232 LDLSYCG-HNGTMAWNVTEKSY-LASVKTLYFMDVNM--SIQTADNVLQSFNNTLNKIRL 287
Query: 372 FNQIKYIYPNAFVNL--PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
++ + +++ P L L L K+K ++F + L+L N I+NL
Sbjct: 288 NGNVRLNKTSLLLSVCSPMLRVLRLIATKIKHLTNHMFDPCSELS---ELDLGGNEISNL 344
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
++ + +K L L N++ V N Q SL + L N I L F NL
Sbjct: 345 SQSMFRGFK-QLKKLQLQINKLTRV-TNSFQILT-SLEFIDLSRNHIHKLSCNDFANLTQ 401
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
++ L L N I+ + F + +L+++ L N + + + L+ L +S+N+L
Sbjct: 402 VKTLYLYSNKISSIRSCLFKDLKSLEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLS 461
Query: 550 SLPRDVFSNTI-IEKLDISYNQ 570
+ F N + L + NQ
Sbjct: 462 LIKSHTFGNLPQLNNLSLEDNQ 483
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 65/283 (22%), Positives = 121/283 (42%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
+++ +N ++I + NI L+ + +SNN + I+ F +L L + L+ N L +
Sbjct: 63 LDISFNSFAQIQ--IEDLNILLNLQYLNVSNNKISKIQDGAFGSLFNLTDLNLASNRLNA 120
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ + L N+L + L N I I +AF L +L L+L N L+ + +V + S
Sbjct: 121 VSNGMLRGLTNLLVLRLDRNYISVIKESAFSTLHSLQVLNLSKNHLRHID-DVKPVLASL 179
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ--EVPVNFLQTFADSLRKLYL 471
L + +NY ++ P+ +K LDLSNNR ++ N T + L Y
Sbjct: 180 YLE-ELYIGSNYFNVFNSSELSTKPLSLKRLDLSNNRFAAFQLTNNIFPTL-NHLDLSYC 237
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N + T L ++ L N+++ + N + + N L
Sbjct: 238 GHNGTMAWNVTEKSYLASVKTLYFMDVNMSIQTADNVLQSFNNTLNKIRLNGNVRLNKTS 297
Query: 532 FYFSF---KLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQ 570
S LR+L + +++ L +F + + +LD+ N+
Sbjct: 298 LLLSVCSPMLRVLRLIATKIKHLTNHMFDPCSELSELDLGGNE 340
Score = 159 (61.0 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 91/368 (24%), Positives = 165/368 (44%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L NLQ L++S NK+ I+ F L L ++ + N+ + + L L L
Sbjct: 81 LLNLQYLNVSNNKISKIQ--DGAFGSLFNLTDLNLASNRLNAVSNG---MLRGLTNLLVL 135
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+D N I I+ + L SL +NL N + I +++ L+E+ + +NY +
Sbjct: 136 RLDRNYISVIKESAFSTLHSLQVLNLSKNHLRHI-DDVKPVLASLYLEELYIGSNYFNVF 194
Query: 331 ESDTFYNLK-ELNTITLSYNLLKSIKTTS--FKNLNNM-L-----NIVLSFNQIKYIYPN 381
S L + LS N + + T+ F LN++ L N +++N + Y
Sbjct: 195 NSSELSTKPLSLKRLDLSNNRFAAFQLTNNIFPTLNHLDLSYCGHNGTMAWNVTEKSYLA 254
Query: 382 AFVNLPNL-VKLDLQ--DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
+ L + V + +Q DN L+ FN N + I +N N+ N + L +P
Sbjct: 255 SVKTLYFMDVNMSIQTADNVLQSFN-NTLNKIR-----LNGNVRLNKTSLLLS---VCSP 305
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+ ++ L L +I+ + N + L +L L NEI +L + F L+ L L+ N
Sbjct: 306 M-LRVLRLIATKIKHL-TNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQIN 363
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
+ V +F + +L+ IDLS N I L+ F +++ L + N++ S+ +F +
Sbjct: 364 KLTRVTN-SFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKD 422
Query: 559 TIIEKLDI 566
++ L++
Sbjct: 423 --LKSLEV 428
>ZFIN|ZDB-GENE-030131-4683 [details] [associations]
symbol:tsku "tsukushi small leucine rich
proteoglycan homolog (Xenopus laevis)" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-030131-4683
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
HOGENOM:HOG000001578 HOVERGEN:HBG054643 OMA:LTRVDCS
GeneTree:ENSGT00390000016740 EMBL:BX537138 EMBL:CU468770
IPI:IPI00486535 UniGene:Dr.94879 IntAct:A8BB59 STRING:A8BB59
Ensembl:ENSDART00000059826 Uniprot:A8BB59
Length = 366
Score = 262 (97.3 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 81/241 (33%), Positives = 130/241 (53%)
Query: 322 LSNNYLELIESDTFYN---LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
LS N + I SDT + L ++ LS NL+ I +F L + + LS N ++ +
Sbjct: 87 LSLNSITSI-SDTMLSGPGYTTLVSLDLSSNLIAQISPKAFSKLRYLETLDLSSNALEGL 145
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
F LP LV+LDL +N+ K+FNL++F+ T + P+ ++LS N +T+++ P
Sbjct: 146 SDGCFTGLP-LVELDLSENQFKEFNLDLFTTRT-QDLPIMVDLSRNLLTSIFRRTPGH-P 202
Query: 439 IYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+YIKSL L+ N+++ VP +N + L+ L LD N I +D AF +L L LSL
Sbjct: 203 LYIKSLMLAGNQLKTVPKLNGIP-----LQYLNLDGNLISSIDTGAFDSLTELVHLSLSG 257
Query: 498 -NNIAVVVKRTFIGMPNLQIIDLSFN-EISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
+ + ++ F + NLQ +DLS N ++ L + F L+ LN+S+ + L R V
Sbjct: 258 LSELTLIHPGAFRSLKNLQALDLSNNSQLKTLNPDVFSGLVSLQELNLSNTAVTPLSRTV 317
Query: 556 F 556
F
Sbjct: 318 F 318
Score = 153 (58.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 62/231 (26%), Positives = 112/231 (48%)
Query: 344 ITLSYNLLKSIKTT--SFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD 401
+ LS N + SI T S ++++ LS N I I P AF L L LDL N L+
Sbjct: 85 LDLSLNSITSISDTMLSGPGYTTLVSLDLSSNLIAQISPKAFSKLRYLETLDLSSNALEG 144
Query: 402 FNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQT 461
+ F+ + + ++ N + +L+ + PI + DLS N + + F +T
Sbjct: 145 LSDGCFTGLPLVELDLSENQFKEFNLDLFTTRTQDLPIMV---DLSRNLLTSI---FRRT 198
Query: 462 FADSL--RKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
L + L L N++K + N L+ L+L+ N I+ + F + L + L
Sbjct: 199 PGHPLYIKSLMLAGNQLKTVPKL---NGIPLQYLNLDGNLISSIDTGAFDSLTELVHLSL 255
Query: 520 S-FNEISMLTGEQFYFSFKLRILNISHN-RLRSLPRDVFSNTI-IEKLDIS 567
S +E++++ F L+ L++S+N +L++L DVFS + +++L++S
Sbjct: 256 SGLSELTLIHPGAFRSLKNLQALDLSNNSQLKTLNPDVFSGLVSLQELNLS 306
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 59/259 (22%), Positives = 117/259 (45%)
Query: 292 NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
++++L N I+ I + + + L + LS+N + I F L+ L T+ LS N L
Sbjct: 83 SHLDLSLNSITSISDTMLSGPGYTTLVSLDLSSNLIAQISPKAFSKLRYLETLDLSSNAL 142
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVFSNI 410
+ + F L ++ + LS NQ K NL +L QD + D + N+ ++I
Sbjct: 143 EGLSDGCFTGLP-LVELDLSENQFKEF------NL-DLFTTRTQDLPIMVDLSRNLLTSI 194
Query: 411 TSKQTPMN-LNLSNNYIT-NLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
++TP + L + + + N + K I ++ L+L N I + + + +
Sbjct: 195 F-RRTPGHPLYIKSLMLAGNQLKTVPKLNGIPLQYLNLDGNLISSIDTGAFDSLTELVHL 253
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNN-IAVVVKRTFIGMPNLQIIDLSFNEISML 527
+E+ + AF +L L+ L L +N+ + + F G+ +LQ ++LS ++ L
Sbjct: 254 SLSGLSELTLIHPGAFRSLKNLQALDLSNNSQLKTLNPDVFSGLVSLQELNLSNTAVTPL 313
Query: 528 TGEQFYFSFKLRILNISHN 546
+ F ++ + + N
Sbjct: 314 SRTVFMQMPNIKSITLGPN 332
>FB|FBgn0262473 [details] [associations]
symbol:Tl "Toll" species:7227 "Drosophila melanogaster"
[GO:0019730 "antimicrobial humoral response" evidence=IGI]
[GO:0019732 "antifungal humoral response" evidence=IMP] [GO:0006963
"positive regulation of antibacterial peptide biosynthetic process"
evidence=IMP] [GO:0006967 "positive regulation of antifungal
peptide biosynthetic process" evidence=IMP] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;NAS]
[GO:0008063 "Toll signaling pathway" evidence=IEA;NAS] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0006952 "defense
response" evidence=NAS;TAS] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP;NAS;TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0007416 "synapse assembly" evidence=IMP]
[GO:0006955 "immune response" evidence=TAS] [GO:0009620 "response
to fungus" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0009880 "embryonic pattern specification"
evidence=TAS] [GO:0070976 "TIR domain binding" evidence=IPI]
[GO:0009617 "response to bacterium" evidence=NAS] [GO:0050832
"defense response to fungus" evidence=TAS] [GO:0045087 "innate
immune response" evidence=IDA;NAS;TAS] [GO:0019955 "cytokine
binding" evidence=TAS] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IEA;TAS] [GO:0035007 "regulation
of melanization defense response" evidence=TAS] [GO:0035172
"hemocyte proliferation" evidence=IMP;TAS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0007352 "zygotic specification of
dorsal/ventral axis" evidence=IEA;NAS] [GO:0045610 "regulation of
hemocyte differentiation" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043234 "protein complex" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0033565 "ESCRT-0
complex" evidence=IDA] [GO:0016201 "synaptic target inhibition"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027202 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 EMBL:AE014297 GO:GO:0016021 GO:GO:0007507
GO:GO:0009897 GO:GO:0050830 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0045087 GO:GO:0000910 GO:GO:0007416 GO:GO:0019732
GO:GO:0030097 GO:GO:0019955 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0004888 GO:GO:0008063 GO:GO:0006963
GO:GO:0035172 GO:GO:0006967 GeneTree:ENSGT00700000104286
GO:GO:0007352 GO:GO:0045610 GO:GO:0033565 SUPFAM:SSF52200
GO:GO:0016201 EMBL:M19969 EMBL:BT031153 EMBL:AY349649 EMBL:AY349650
EMBL:AY349651 EMBL:AY349652 EMBL:AY349653 EMBL:AY349654
EMBL:AY349655 EMBL:AY121616 PIR:A29943 RefSeq:NP_524518.1
RefSeq:NP_733166.1 UniGene:Dm.2347 ProteinModelPortal:P08953
SMR:P08953 DIP:DIP-34358N IntAct:P08953 STRING:P08953 PaxDb:P08953
PRIDE:P08953 EnsemblMetazoa:FBtr0085059 EnsemblMetazoa:FBtr0330155
GeneID:43222 KEGG:dme:Dmel_CG5490 CTD:109651 FlyBase:FBgn0262473
InParanoid:P08953 OMA:STNDICP OrthoDB:EOG4SF7MS PhylomeDB:P08953
ChiTaRS:Tl GenomeRNAi:43222 NextBio:832799 Bgee:P08953
GermOnline:CG5490 PANTHER:PTHR24371:SF0 Uniprot:P08953
Length = 1097
Score = 279 (103.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 111/397 (27%), Positives = 194/397 (48%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI-SFSLFNSNE 254
R N I ++ +LF L NL+ + NKL+ ++ +F KL+ L + S L N +
Sbjct: 182 RAN-IEEMPSHLFDDLENLESIEFGSNKLR--QMPRGIFGKMPKLKQLNLWSNQLHNLTK 238
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
+ + ++ + + +N I+ + + +LT++ INL N + LF N H
Sbjct: 239 HDF----EGATSVLGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKH 294
Query: 315 KRLKEIRLSNNYLEL--IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
L E+RL NN + L + S F N EL + L L +S+ F++ + NI L
Sbjct: 295 --LNEVRLMNNRVPLATLPSRLFANQPELQILRLRAEL-QSLPGDLFEHSTQITNISLGD 351
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N +K + + NL+ LDL +N+L ++F++ T+ +L L +N +T +
Sbjct: 352 NLLKTLPATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTTNLT---DLRLEDNLLTGI-SG 407
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKH----LDA------ 481
D + +L +S NR++ + F+ T + LR L+LD N+I LD
Sbjct: 408 DIFSNLGNLVTLVMSRNRLRTIDSRAFVST--NGLRHLHLDHNDIDLQQPLLDIMLQTQI 465
Query: 482 -TAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
+ FG + L L+L +N+I V M L+ +DLS+N IS L E F + R+
Sbjct: 466 NSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGYEDLAFLSQNRL 525
Query: 541 -LNISHNRLR--SLPRDV-----FSNTIIEKLDISYN 569
+N++HN++R +LP DV ++N ++ +D++ N
Sbjct: 526 HVNMTHNKIRRIALPEDVHLGEGYNNNLVH-VDLNDN 561
Score = 224 (83.9 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 97/386 (25%), Positives = 173/386 (44%)
Query: 202 DLNGNLFR-HLYNLQELS-LSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYI 259
+L N+ R HL L L F ++ + +N+ L LE+ N E P ++
Sbjct: 136 NLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRA---NIEEMPSHL 192
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH-FNIHKRLK 318
+ +L LE + +N ++ + + L +NL N++ HN H F +
Sbjct: 193 FD-DLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQL---HNLTKHDFEGATSVL 248
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
I + +N +E + D F +L + I LS NL +S+ F + ++ + L N++
Sbjct: 249 GIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRVPLA 308
Query: 379 -YPNA-FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
P+ F N P L L L+ +L+ ++F + T N++L +N + L +
Sbjct: 309 TLPSRLFANQPELQILRLRA-ELQSLPGDLFEHSTQIT---NISLGDNLLKTLPAT-LLE 363
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
+ + SLDLSNNR+ +P + L +L L L+ N + + F NL L L +
Sbjct: 364 HQVNLLSLDLSNNRLTHLP-DSLFAHTTNLTDLRLEDNLLTGISGDIFSNLGNLVTLVMS 422
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEIS--------MLTGE---QFYFSFKLRILNISH 545
N + + R F+ L+ + L N+I ML + F + L LN+ +
Sbjct: 423 RNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTLNLRN 482
Query: 546 NRLRSLPRDVFSNTIIE--KLDISYN 569
N + + D + NT+++ +LD+SYN
Sbjct: 483 NSIIFVYND-WKNTMLQLRELDLSYN 507
Score = 214 (80.4 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 92/390 (23%), Positives = 178/390 (45%)
Query: 199 KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYY 258
++T + NL + NL L L N I E+ S++FD E L+ +E F + P
Sbjct: 161 RLTHIPANLLTDMRNLSHLELRAN---IEEMPSHLFDDLENLESIE--FGSNKLRQMPRG 215
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF-HFNIHKRL 317
I K + L+ L + +N + N+ + TS+ I++ N I ++ +++F H +
Sbjct: 216 IFGK-MPKLKQLNLWSNQLHNLTKHDFEGATSVLGIDIHDNGIEQLPHDVFAHLT---NV 271
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNL--LKSIKTTSFKNLNNMLNIVLSFNQI 375
+I LS N + F + K LN + L N L ++ + F N L I+ ++
Sbjct: 272 TDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRVPLATLPSRLFANQPE-LQILRLRAEL 330
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + + F + + + L DN LK + + + ++L+LSNN +T+L ++
Sbjct: 331 QSLPGDLFEHSTQITNISLGDNLLKTLPATLLEHQVNL---LSLDLSNNRLTHLPDSLFA 387
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+ L L +N + + + + L L + N ++ +D+ AF + + L L L
Sbjct: 388 HTT-NLTDLRLEDNLLTGISGDIFSNLGN-LVTLVMSRNRLRTIDSRAFVSTNGLRHLHL 445
Query: 496 EHNNIAV------VVKRTFIGMP-----NLQIIDLSFNEISMLTGEQFYFSFKLRILNIS 544
+HN+I + ++ +T I P L ++L N I + + +LR L++S
Sbjct: 446 DHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDLS 505
Query: 545 HNRLRSLPRDVFSNTIIEKLDISYNQDKIR 574
+N + SL + + +L ++ +KIR
Sbjct: 506 YNNISSLGYEDLAFLSQNRLHVNMTHNKIR 535
Score = 169 (64.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 71/295 (24%), Positives = 131/295 (44%)
Query: 270 LAMDNNNI-KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L +++N+ NI L L L +++ I NL + L + L N +E
Sbjct: 130 LIFESDNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLL--TDMRNLSHLELRAN-IE 186
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ S F +L+ L +I N L+ + F + + + L NQ+ + + F +
Sbjct: 187 EMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHDFEGATS 246
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNL--NLSNNYITNLYENDKKQAPIYIKSLDL 446
++ +D+ DN ++ +VF+++T+ T +NL NL + L++++K ++ + L
Sbjct: 247 VLGIDIHDNGIEQLPHDVFAHLTNV-TDINLSANLFRSLPQGLFDHNK-----HLNEVRL 300
Query: 447 SNNRIQEVPVNFLQT--FADSLRKLYLDFN-EIKHLDATAFGNLDVLELLSLEHNNIAVV 503
NNR VP+ L + FA+ L E++ L F + + +SL N + +
Sbjct: 301 MNNR---VPLATLPSRLFANQPELQILRLRAELQSLPGDLFEHSTQITNISLGDNLLKTL 357
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
NL +DLS N ++ L F + L L + N L + D+FSN
Sbjct: 358 PATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTTNLTDLRLEDNLLTGISGDIFSN 412
Score = 150 (57.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 74/358 (20%), Positives = 151/358 (42%)
Query: 80 TQIEELPSGL-FDKIENIEQMTLDL-SHNKL-SVLNMATLYSNVTKL---QHLGTTILKD 133
T ++LP L +++ ++ L H + S+L+ + S T + +LG I +
Sbjct: 85 TDYQQLPKKLRIGEVDRVQMRRCMLPGHTPIASILDYLGIVSPTTLIFESDNLGMNITRQ 144
Query: 134 REKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXX 193
++T + NL ++ + + N E+ S
Sbjct: 145 HLDRLHGLKRFRFTTRRLTHIPANLLTDMRN--LSHLELRANIEEMPSHLFDDLENLESI 202
Query: 194 XXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
NK+ + +F + L++L+L N+L N D +L I
Sbjct: 203 EFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLH----NLTKHDFEGATSVLGIDIHDNGIE 258
Query: 254 EFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI--SKIHNNLFHF 311
+ P+ + N + + + N +++ + LN + L N++ + + + LF
Sbjct: 259 QLPHDVFAHLTNVTD-INLSANLFRSLPQGLFDHNKHLNEVRLMNNRVPLATLPSRLFA- 316
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N L+ +RL L+ + D F + ++ I+L NLLK++ T ++ N+L++ LS
Sbjct: 317 N-QPELQILRLRAE-LQSLPGDLFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLS 374
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
N++ ++ + F + NL L L+DN L + ++FSN+ + T L +S N + +
Sbjct: 375 NNRLTHLPDSLFAHTTNLTDLRLEDNLLTGISGDIFSNLGNLVT---LVMSRNRLRTI 429
Score = 117 (46.2 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 84/412 (20%), Positives = 166/412 (40%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L LE+ +++ + FD+++ +++ + ++ ++P G+F K+ ++Q L+L
Sbjct: 176 LSHLELRA-NIEEMPSHLFDDLENLE--SIEFGSNKLRQMPRGIFGKMPKLKQ--LNLWS 230
Query: 106 NKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLN--GNLFRHLQ 163
N+L L + T + LG I D N +TD+N NLFR L
Sbjct: 231 NQLHNLTKHD-FEGATSV--LGIDI-HDNGIEQLPHDVFAHLTN-VTDINLSANLFRSLP 285
Query: 164 KSIVKAKKNNN-----NNEDQVSDREKXXXXXX--XXXXRCN-KITDLNGNLFRHLYNLQ 215
+ + K+ N NN ++ R ++ L G+LF H +
Sbjct: 286 QGLFDHNKHLNEVRLMNNRVPLATLPSRLFANQPELQILRLRAELQSLPGDLFEHSTQIT 345
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
+SL N L+ L + + + ++ LL + S P + N + L +++N
Sbjct: 346 NISLGDNLLKT--LPATLLE--HQVNLLSLDLSNNRLTHLPDSLFAHTTNLTD-LRLEDN 400
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
+ I NL +L + + N++ I + F L+ + L +N ++L
Sbjct: 401 LLTGISGDIFSNLGNLVTLVMSRNRLRTIDSRAFVST--NGLRHLHLDHNDIDL--QQPL 456
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKN------LNNMLNIVLSFNQIKYIYPN-AFVNLPN 388
++ I + + + T + +N N+ N +L ++ Y N + + +
Sbjct: 457 LDIMLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGYED 516
Query: 389 LVKLDLQDNKLKDFNLNVFSN-ITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
L L N+L ++N+ N I P +++L Y NL D P+
Sbjct: 517 LAFLS--QNRL---HVNMTHNKIRRIALPEDVHLGEGYNNNLVHVDLNDNPL 563
Score = 55 (24.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP-NLQIIDLSFNEI 524
L +L+L+ N + L + + + L L NN+ + +P NL +D+S+N +
Sbjct: 670 LMELHLENNTLLRLPSANTPGYESVTSLHLAGNNLTSI---DVDQLPTNLTHLDISWNHL 726
Query: 525 SMLTGEQFYF---SFKLRILNISHN 546
ML F + K R + +S N
Sbjct: 727 QMLNATVLGFLNRTMKWRSVKLSGN 751
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 454 VPVNFLQTFADSLRKLY-LDFNEIK 477
+P N +++ ADS R + L N IK
Sbjct: 903 IPENIMRSVADSRRTIIVLSQNFIK 927
>UNIPROTKB|F1NKM7 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:AYGKAPS EMBL:AADN02063998 EMBL:AADN02063999 IPI:IPI00591161
ProteinModelPortal:F1NKM7 Ensembl:ENSGALT00000000792 Uniprot:F1NKM7
Length = 811
Score = 275 (101.9 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 102/355 (28%), Positives = 168/355 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I+ + G F LY+L+ L L N+L I + + D+ LQ L + +L +
Sbjct: 5 NQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEA-LRDL-PNLQSLRLDANLISVVPEES 62
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L +L L +D+N + I +L L +L + L N+I +I + F N+ L
Sbjct: 63 F---EGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQ-NLSS-L 117
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + ++ F L L T+ L+YN L + + L + + N IK
Sbjct: 118 VVLHLHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPG-AIRTLGRLQELGFHNNNIKA 176
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I NAFV P L + DN ++ + F + T LS N T++ E +
Sbjct: 177 IPENAFVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHT-----LSLNGATDIREFPDLKG 231
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ L L+ I+ +P Q + LR L L N+I+ D +F LE L L+H
Sbjct: 232 TTSLEVLTLTRAGIRLLPRAVCQQLPN-LRVLELSHNKIE--DLPSFHRCQRLEELGLQH 288
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
N I + TF+ + L+ IDLS+N+I + + F L L++S NRL +LP
Sbjct: 289 NRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDNRLAALP 343
Score = 237 (88.5 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 87/311 (27%), Positives = 146/311 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L +L+ L + NN + I +L +L +L + L+ N IS + F + L+ + L
Sbjct: 18 LYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEESFE-GLQS-LRHLWLD 75
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
+N L I L L +TL+ N + I +F+NL++++ + L N+I+ + N F
Sbjct: 76 DNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLHLHNNRIQRLGANGF 135
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
L NL LDL N+L +F I + L NN I + EN P+ +++
Sbjct: 136 DGLHNLETLDLNYNELLEFP----GAIRTLGRLQELGFHNNNIKAIPENAFVGNPL-LQT 190
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYL----DFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ +N IQ V + Q + L L L D E L T LE+L+L
Sbjct: 191 IHFYDNPIQFVGQSAFQ-YLPKLHTLSLNGATDIREFPDLKGTTS-----LEVLTLTRAG 244
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN- 558
I ++ + +PNL++++LS N+I L F+ +L L + HNR+ + D F
Sbjct: 245 IRLLPRAVCQQLPNLRVLELSHNKIEDLPS--FHRCQRLEELGLQHNRIHEIRADTFVQL 302
Query: 559 TIIEKLDISYN 569
T + +D+S+N
Sbjct: 303 TALRSIDLSWN 313
Score = 205 (77.2 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 94/384 (24%), Positives = 166/384 (43%)
Query: 51 ITGKDLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS 109
++G + I AF + Y L L + N Q+ +P+ + N++ + LD N +S
Sbjct: 2 LSGNQISSIPGEAFSGL---YSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDA--NLIS 56
Query: 110 VLNMATLYSNVTKLQHL-----GTTILKDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
V+ + + + L+HL T + R N+I + F++L
Sbjct: 57 VVPEES-FEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLS 115
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
S+V +NN + ++ N++ + G + R L LQEL N
Sbjct: 116 -SLVVLHLHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPGAI-RTLGRLQELGFHNNN 173
Query: 224 LQIIELNSNVFD-VFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRN 282
++ I N+ V + + + + + + F Y L K L+TL N +IR
Sbjct: 174 IKAIPENAFVGNPLLQTIHFYDNPIQFVGQSAFQY--LPK-LHTLSL-----NGATDIRE 225
Query: 283 Y-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKEL 341
+ L TSL + L I + + + L+ + LS+N +E + S F+ + L
Sbjct: 226 FPDLKGTTSLEVLTLTRAGIRLLPRAVCQ-QL-PNLRVLELSHNKIEDLPS--FHRCQRL 281
Query: 342 NTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD 401
+ L +N + I+ +F L + +I LS+N I +I+P+AFV L +L KLDL DN+L
Sbjct: 282 EELGLQHNRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDNRLAA 341
Query: 402 FNLNVFSNITSKQTPMNLNLSNNY 425
L ++T + N LS +
Sbjct: 342 LPLGGLGSLTHLKLQGNPALSEPF 365
Score = 197 (74.4 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 68/248 (27%), Positives = 109/248 (43%)
Query: 321 RLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
RLS N + I + F L L + L N L I + ++L N+ ++ L N I +
Sbjct: 1 RLSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPE 60
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
+F L +L L L DN L + + + + + Q M L L+ + Y + +
Sbjct: 61 ESFEGLQSLRHLWLDDNALTEIPVRALNRLPALQA-MTLALNQIWRIPDYAFQNLSSLVV 119
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
L L NNRIQ + N +L L L++NE+ A L L+ L +NNI
Sbjct: 120 ---LHLHNNRIQRLGANGFDGL-HNLETLDLNYNELLEFPG-AIRTLGRLQELGFHNNNI 174
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH-NRLRSLPRDVFSNT 559
+ + F+G P LQ I N I + F + KL L+++ +R P D+ T
Sbjct: 175 KAIPENAFVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLNGATDIREFP-DLKGTT 233
Query: 560 IIEKLDIS 567
+E L ++
Sbjct: 234 SLEVLTLT 241
Score = 163 (62.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 78/297 (26%), Positives = 136/297 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I + F++L +L L L N++Q L +N FD L+ L+++++ EFP
Sbjct: 101 NQIWRIPDYAFQNLSSLVVLHLHNNRIQ--RLGANGFDGLHNLETLDLNYN--ELLEFPG 156
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
I + L L+ L NNNIK I + L I+ N I + + F + +L
Sbjct: 157 AI--RTLGRLQELGFHNNNIKAIPENAFVGNPLLQTIHFYDNPIQFVGQSAFQYL--PKL 212
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L N ++ E L +TL+ ++ + + L N+ + LS N+I+
Sbjct: 213 HTLSL-NGATDIREFPDLKGTTSLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIED 271
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ P+ F L +L LQ N++ + + F +T+ ++ ++LS N I ++ D
Sbjct: 272 L-PS-FHRCQRLEELGLQHNRIHEIRADTFVQLTALRS---IDLSWNDIHFIHP-DAFVT 325
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI--KHLDATAFGNLDVLEL 492
+ LDLS+NR+ +P+ L SL L L N + +F L VLE+
Sbjct: 326 LRSLTKLDLSDNRLAALPLGGL----GSLTHLKLQGNPALSEPFAEDSFPKLRVLEV 378
Score = 139 (54.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 45/158 (28%), Positives = 79/158 (50%)
Query: 421 LSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
LS N I+++ + + +Y +K L L NN++ +P L+ + L+ L LD N I +
Sbjct: 2 LSGNQISSI--PGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPN-LQSLRLDANLISVV 58
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
+F L L L L+ N + + R +P LQ + L+ N+I + F L
Sbjct: 59 PEESFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLV 118
Query: 540 ILNISHNRLRSLPRDVFSNTI-IEKLDISYNQDKIRPG 576
+L++ +NR++ L + F +E LD++YN+ PG
Sbjct: 119 VLHLHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPG 156
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 46/182 (25%), Positives = 77/182 (42%)
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE 453
L N++ FS + S + M L NN ++ + + P ++SL L N I
Sbjct: 2 LSGNQISSIPGEAFSGLYSLKILM---LQNNQLSRIPAEALRDLP-NLQSLRLDANLISV 57
Query: 454 VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
VP + SLR L+LD N + + A L L+ ++L N I + F + +
Sbjct: 58 VPEESFEGL-QSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSS 116
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKI 573
L ++ L N I L F L L++++N L P + + +++L N K
Sbjct: 117 LVVLHLHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPGAIRTLGRLQELGFHNNNIKA 176
Query: 574 RP 575
P
Sbjct: 177 IP 178
>UNIPROTKB|A0ENH4 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9823 "Sus
scrofa" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0032722 GO:GO:0032755 GO:GO:0009615
GO:GO:0051092 GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372
SMART:SM00013 GO:GO:0032760 GO:GO:0043330 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 PANTHER:PTHR24365:SF5 GO:GO:0045356
GO:GO:0034346 EMBL:CU466336 EMBL:DQ266435 EMBL:AB291812
RefSeq:NP_001090913.1 UniGene:Ssc.51668 STRING:A0ENH4
Ensembl:ENSSSCT00000017207 GeneID:100037937 KEGG:ssc:100037937
OMA:LNLGYNI Uniprot:A0ENH4
Length = 905
Score = 231 (86.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 99/380 (26%), Positives = 174/380 (45%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI-------SFSLFNSNEFPYYILNKNLN 265
NL L LS N L +I +S + K LE S SL+ + Y L ++
Sbjct: 276 NLSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSF- 334
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
T + +++ + + I ++S L SL Y+N+E N I N F I +LK + LSN+
Sbjct: 335 TKQSISLAS--LPKIEDFSFQWLKSLEYLNMEDNNFPGIKRNTFTGLI--KLKSLSLSNS 390
Query: 326 Y--LELIESDTFYNLKE--LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI-KYIYP 380
+ L + ++TF +L + L + L+ N + I++ +F L ++ + L N+I + +
Sbjct: 391 FSSLRTLTNETFISLADSPLLILNLTKNKISKIESGAFSWLGHLKVLDLGLNEIGQELTG 450
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
+ L N+V++ L N+ + + F+ + S Q L L + N+ + P++
Sbjct: 451 QEWRGLKNIVEVYLSYNRYLELTTDSFALVPSLQ---QLMLRRVALRNMDCSPSPFHPLF 507
Query: 441 -IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL--DATAFG------NLDVLE 491
+ LDLSNN I + L+ + L+ L L N + L A G L L
Sbjct: 508 NLTILDLSNNNIANINDELLKGL-EKLQILDLQHNNLARLWKHANPGGPVQFLKGLSHLH 566
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
+L+LE N + F + L+ IDL N +++L F L+ L++ N + S+
Sbjct: 567 ILNLESNGFDEIPADAFRDLSELKSIDLGLNNLNILPPSVFDNQVSLKSLSLQKNLITSV 626
Query: 552 PRDVFSNTI--IEKLDISYN 569
+ VF + LD+ +N
Sbjct: 627 KKTVFGPAFQKLSNLDMRFN 646
Score = 208 (78.3 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 77/294 (26%), Positives = 139/294 (47%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ +NL +N++ ++ +F I+ +L + N + +E + +L L + L +N
Sbjct: 53 NITVLNLTHNQLRRLPPA--NFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEILNLQHN 110
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L + +F N++ + L N I+ I N F NL NL+KLDL N L L
Sbjct: 111 ELSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQLQ 170
Query: 410 ITSKQTPMNLNLSNNYITNLYENDKK-QAPIYIKSLDLSNNRIQEV-PVNFL---QTFAD 464
+ + Q L L+NN I+ L + +K L+LS+N+IQE P F + F
Sbjct: 171 LENLQ---ELLLANNKISALKREELDFLGNSSLKRLELSSNQIQEFSPGCFHAIGKLFGL 227
Query: 465 SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP--NLQIIDLSFN 522
SL + L + + L N + E LSL + + TF G+ NL ++DLS N
Sbjct: 228 SLNNVKLSPSLTEKL-CLELSNTSI-ENLSLSNIQLYKTSNTTFFGLKQTNLSMLDLSHN 285
Query: 523 EISMLTGEQFYFSFKLRILNISHNRLRSLP-RDVFSNTIIEKLDI--SYNQDKI 573
+S++ + F + L+ + +N + L R ++ + ++ L++ S+ + I
Sbjct: 286 SLSVIGNDSFAWLPHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSFTKQSI 339
Score = 204 (76.9 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 118/508 (23%), Positives = 228/508 (44%)
Query: 101 LDLSHNKLSVLNMA--TLYSNVTKLQHLGTTILK-DRE--KXXXXXXXXXXRCNKITDLN 155
L+L+HN+L L A T+YS +T L TI K + E + + N+++ L+
Sbjct: 57 LNLTHNQLRRLPPANFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEILNLQHNELSQLS 116
Query: 156 GNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQ 215
F ++++ +N+ + ++ K N ++ L NLQ
Sbjct: 117 DKTFIFCM-NLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQ 175
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
EL L+ NK+ ++ F L+ LE+S + EF + + L L+++N
Sbjct: 176 ELLLANNKISALKREELDFLGNSSLKRLELSSNQIQ--EFSPGCFHA-IGKLFGLSLNNV 232
Query: 276 NIKNIRNYSL---YNLTSLNYINLEYNKISKIHNNLFHFNIHK-RLKEIRLSNNYLELIE 331
+ L + TS+ ++L ++ K N F F + + L + LS+N L +I
Sbjct: 233 KLSPSLTEKLCLELSNTSIENLSLSNIQLYKTSNTTF-FGLKQTNLSMLDLSHNSLSVIG 291
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM--LNIVLSFNQ-------IKYIYPNA 382
+D+F L L L YN ++ + + S L+N+ LN+ SF + + I +
Sbjct: 292 NDSFAWLPHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSFTKQSISLASLPKIEDFS 351
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY-----ITNLYENDKKQA 437
F L +L L+++DN N F+ + ++ L+LSN++ +TN +
Sbjct: 352 FQWLKSLEYLNMEDNNFPGIKRNTFTGLIKLKS---LSLSNSFSSLRTLTNETFISLADS 408
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI-KHLDATAFGNLDVLELLSLE 496
P+ I L+L+ N+I ++ ++ L+ L L NEI + L + L + + L
Sbjct: 409 PLLI--LNLTKNKISKIESGAF-SWLGHLKVLDLGLNEIGQELTGQEWRGLKNIVEVYLS 465
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISML--TGEQFYFSFKLRILNISHNRLRSLPRD 554
+N + +F +P+LQ + L + + + F+ F L IL++S+N + ++ +
Sbjct: 466 YNRYLELTTDSFALVPSLQQLMLRRVALRNMDCSPSPFHPLFNLTILDLSNNNIANINDE 525
Query: 555 VFSNTI-IEKLDISYNQDKIRPGRESNP 581
+ ++ LD+ +N + R + +NP
Sbjct: 526 LLKGLEKLQILDLQHN-NLARLWKHANP 552
Score = 94 (38.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 33/109 (30%), Positives = 53/109 (48%)
Query: 3 LDLSHNKLSVLNMATLYS--NVTKLQHLGTTI--LKGDQLQGIFNSKLRELEITGKDLKF 58
LDLSHN LS + T N+ +L I LK ++L + NS L+ LE++ ++
Sbjct: 153 LDLSHNGLSSTKLGTQLQLENLQELLLANNKISALKREELDFLGNSSLKRLELSSNQIQE 212
Query: 59 IDPSAFDNIDACYDLTL---KITNTQIEELPSGLFD-KIENIEQMTLDL 103
P F I + L+L K++ + E+L L + IEN+ + L
Sbjct: 213 FSPGCFHAIGKLFGLSLNNVKLSPSLTEKLCLELSNTSIENLSLSNIQL 261
Score = 72 (30.4 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 5 LSHNKLSVLNMATL-YSNVTKLQHLGTTILKGDQLQ----GIFNSKLRELEITGKDLKFI 59
L++NK+S L L + + L+ L L +Q+Q G F++ + ++ ++K +
Sbjct: 179 LANNKISALKREELDFLGNSSLKRLE---LSSNQIQEFSPGCFHAIGKLFGLSLNNVK-L 234
Query: 60 DPSAFDNIDACYDLT------LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
PS + + C +L+ L ++N Q+ + + F ++ LDLSHN LSV+
Sbjct: 235 SPSLTEKL--CLELSNTSIENLSLSNIQLYKTSNTTFFGLKQTNLSMLDLSHNSLSVI 290
Score = 57 (25.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 25 LQHLGTTILK-GDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIE 83
L H G + K G QLQ + N L+EL + + + D + L++++ QI+
Sbjct: 155 LSHNGLSSTKLGTQLQ-LEN--LQELLLANNKISALKREELDFLGNSSLKRLELSSNQIQ 211
Query: 84 ELPSGLFDKIENIEQMTLDLSHNKLS 109
E G F I + L L++ KLS
Sbjct: 212 EFSPGCFHAIGKL--FGLSLNNVKLS 235
Score = 57 (25.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 33/133 (24%), Positives = 58/133 (43%)
Query: 3 LDLSHNKLSVLNMATLY--SNVTKLQHLGTTILKGDQLQGIFNSK-LRELEITGKDLKFI 59
L+L HN+LS L+ T N+ +L HL + ++ Q N K L +L+++ L
Sbjct: 105 LNLQHNELSQLSDKTFIFCMNLIEL-HLMSNSIQKIQNNPFKNLKNLIKLDLSHNGLSST 163
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
++ +L L N +I L D + N L+LS N++ + ++
Sbjct: 164 KLGTQLQLENLQELLL--ANNKISALKREELDFLGNSSLKRLELSSNQIQEFSPGCFHA- 220
Query: 120 VTKLQHLGTTILK 132
+ KL L +K
Sbjct: 221 IGKLFGLSLNNVK 233
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 165 (63.1 bits), Expect = 2.1e-20, Sum P(4) = 2.1e-20
Identities = 44/135 (32%), Positives = 72/135 (53%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ I LE N I I F + +++L+ I LSNN + I D F L+ LN++ L N
Sbjct: 310 TMTEIRLELNGIKSIPPGAF--SPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
+ + F L + ++L+ N+I I P+AF +L NL L L DNK++ F++
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 427
Query: 410 ITSKQTPMNLNLSNN 424
+ + QT L+L+ N
Sbjct: 428 LRAIQT---LHLAQN 439
Score = 162 (62.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 52/167 (31%), Positives = 82/167 (49%)
Query: 360 KNL-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPM 417
KN+ N + L+ N I I+ N F L L L L +N++ F ++ ++ +
Sbjct: 57 KNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRL 116
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
N N + L++N+ QA + LDLS N IQ +P + D L+ L LD N+I
Sbjct: 117 NRNQLHMLPELLFQNN--QA---LSRLDLSENAIQAIPRKAFRGATD-LKNLQLDKNQIS 170
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ AF L LE+L+L +NNI + +F MP L+ L N +
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 158 (60.7 bits), Expect = 3.2e-17, Sum P(3) = 3.2e-17
Identities = 47/167 (28%), Positives = 81/167 (48%)
Query: 262 KNL--NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
KN+ NT E L ++ NNI I L L + L N+I + F + K L+
Sbjct: 57 KNIPRNT-ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAF--DDMKELER 113
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+RL+ N L ++ F N + L+ + LS N +++I +F+ ++ N+ L NQI I
Sbjct: 114 LRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIE 173
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
AF L L L L +N + ++ F+++ +T L +N++
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT---FRLHSNHL 217
Score = 148 (57.2 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 89/343 (25%), Positives = 146/343 (42%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N++ I+E +F+KL L +I+ S +E + E L +
Sbjct: 544 ELRLNNNEISILEATG----MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSE-LHLTA 598
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N +++IR+ L L + L N+IS IHN+ F + RL + L +N + +
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRL--LSLYDNQITTVSPGA 656
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLPNLVK-L 392
F L+ L+T+ NLL + F N N L + + + K + N P+ ++ +
Sbjct: 657 FDTLQSLSTL----NLLAN----PF-NCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQI 707
Query: 393 DLQDNKLKDFNLNVFSN----ITSKQTPMNLNLSNNYI--TNLYEND-KKQAPIYIKSLD 445
LQD DF + Q P + + +N + K P + L
Sbjct: 708 PLQDVAFPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIPKNVTELY 767
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L TF L+ + L N+I L ++F N+ L L L +N + +
Sbjct: 768 LDGNQFTLVPGQ-LSTFK-YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F G+ +L+++ L N+IS L F L L I N L
Sbjct: 826 LAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPL 868
Score = 143 (55.4 bits), Expect = 2.1e-20, Sum P(4) = 2.1e-20
Identities = 37/133 (27%), Positives = 71/133 (53%)
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
Q+ L L+NN I+ L + ++K ++LSNN++ E+ + A S+ +L+L
Sbjct: 540 QSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTA 598
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+++ + + F LD L L L +N I+ + +F G+ N++++ L N+I+ ++ F
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFD 658
Query: 534 FSFKLRILNISHN 546
L LN+ N
Sbjct: 659 TLQSLSTLNLLAN 671
Score = 130 (50.8 bits), Expect = 0.00018, P = 0.00018
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 413 KQTPMN---LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
K P N L L+ N IT +++ND ++ L L N+I V + L +L
Sbjct: 57 KNIPRNTERLELNGNNITRIHKNDFAGLK-QLRVLQLMENQIGAVERGAFDDMKE-LERL 114
Query: 470 YLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG 529
L+ N++ L F N L L L N I + ++ F G +L+ + L N+IS +
Sbjct: 115 RLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEE 174
Query: 530 EQFYFSFKLRILNISHNRLRSLPRDVFSN 558
F L +L +++N + ++P F++
Sbjct: 175 GAFRALRGLEVLTLNNNNITTIPVSSFNH 203
Score = 116 (45.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P + + L N I+ +P + LR++ L N+I + AF L L L L
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + + F G+ LQ++ L+ N+I+ + + F L +L++ N+++SL + F+
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Query: 558 NT-IIEKLDISYN 569
+ I+ L ++ N
Sbjct: 427 SLRAIQTLHLAQN 439
Score = 113 (44.8 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 41/154 (26%), Positives = 71/154 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT ++ N F L L+ L L N++ +E + FD ++L+ L ++ + + P
Sbjct: 71 NNITRIHKNDFAGLKQLRVLQLMENQIGAVERGA--FDDMKELERLRLNRNQLHM--LPE 126
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ N L L + N I+ I + T L + L+ N+IS I F + L
Sbjct: 127 LLFQNN-QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFR--ALRGL 183
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+ + L+NN + I +F ++ +L T L N L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 101 (40.6 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 34/136 (25%), Positives = 67/136 (49%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIAV 502
++ S+ ++ ++P Q+ A+ L L+ NEI L+AT F L L+ ++L +N ++
Sbjct: 524 VECSSLKLTKIPERIPQSTAE----LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSE 579
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-I 561
+ F G ++ + L+ N++ + F LR L + +NR+ + D F+ +
Sbjct: 580 IEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNV 639
Query: 562 EKLDISYNQ-DKIRPG 576
L + NQ + PG
Sbjct: 640 RLLSLYDNQITTVSPG 655
Score = 97 (39.2 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
SN ++ +P + ++ +LYLD N+ L L+L+ L +N I+ +
Sbjct: 748 SNKHLRALP----KGIPKNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNS 802
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLD 565
+F M L + LS+N + + F LR+L++ N + +L +F++ T + L
Sbjct: 803 SFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLA 862
Query: 566 ISYN 569
I N
Sbjct: 863 IGAN 866
Score = 97 (39.2 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N IK+I + L I+L N+I++I + F + + L +
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQ-GL-RSLNSLV 363
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + I+ +F++L N+ + L N+I+ +
Sbjct: 364 LYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKG 423
Query: 382 AFVNLPNLVKLDLQDNK-LKDFNL 404
F +L + L L N + D NL
Sbjct: 424 TFTSLRAIQTLHLAQNPFICDCNL 447
Score = 88 (36.0 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELL 493
++ P L L+NN I + + L+K+ L N++ ++ AF G V EL
Sbjct: 536 ERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSEL- 594
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + F G+ L+ + L N IS + + F +R+L++ N++ ++
Sbjct: 595 HLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSP 654
Query: 554 DVF 556
F
Sbjct: 655 GAF 657
Score = 79 (32.9 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 68/322 (21%), Positives = 126/322 (39%)
Query: 43 NSKLRELEITGKDLKFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTL 101
N L L+++ ++ I AF DL L++ QI + G F + +E +TL
Sbjct: 132 NQALSRLDLSENAIQAIPRKAFRGAT---DLKNLQLDKNQISCIEEGAFRALRGLEVLTL 188
Query: 102 D---------LSHNKLSVLNMATLYSNVTKLQ-HLGTTILKDREKXXXXXXXXXXRCNKI 151
+ S N + L L+SN HL R++ +C+
Sbjct: 189 NNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT---QCSGP 245
Query: 152 TDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHL 211
L G +QKS + +V N I D G +
Sbjct: 246 ASLRGLNVAEVQKSEFSC--SGQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAI 303
Query: 212 -YNLQELSLSFNKLQIIELNS---NVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
NL E +++ +L++ + S F + KL+ +++S + + P + L +L
Sbjct: 304 PANLPE-TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQI-AEIAPDAF--QGLRSL 359
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
L + N I ++ L +L + L NKI+ I + F ++ + L + L +N +
Sbjct: 360 NSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQ-DL-QNLSLLSLYDNKI 417
Query: 328 ELIESDTFYNLKELNTITLSYN 349
+ + TF +L+ + T+ L+ N
Sbjct: 418 QSLAKGTFTSLRAIQTLHLAQN 439
Score = 67 (28.6 bits), Expect = 2.1e-20, Sum P(4) = 2.1e-20
Identities = 25/97 (25%), Positives = 45/97 (46%)
Query: 30 TTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGL 89
T I K D G+ +LR L++ + ++ AFD++ L++ Q+ LP L
Sbjct: 74 TRIHKND-FAGL--KQLRVLQLMENQIGAVERGAFDDMKELE--RLRLNRNQLHMLPELL 128
Query: 90 FDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
F + + + LDLS N + + + T L++L
Sbjct: 129 FQNNQALSR--LDLSENAIQAIPRKA-FRGATDLKNL 162
Score = 65 (27.9 bits), Expect = 3.3e-20, Sum P(4) = 3.3e-20
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 29 GTTI-LKGDQLQGIFNSKLRE---LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEE 84
GTT+ G LQ I + R LE+ G ++ I + F + L++ QI
Sbjct: 42 GTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLR--VLQLMENQIGA 99
Query: 85 LPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ G FD ++ +E+ L L+ N+L +L L+ N L L
Sbjct: 100 VERGAFDDMKELER--LRLNRNQLHMLP-ELLFQNNQALSRL 138
Score = 60 (26.2 bits), Expect = 1.0e-09, Sum P(4) = 1.0e-09
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
NKI + + F+ L NL LSL NK+Q L F +Q L ++ + F
Sbjct: 391 NKINCIRPDAFQDLQNLSLLSLYDNKIQ--SLAKGTFTSLRAIQTLHLAQNPF 441
Score = 48 (22.0 bits), Expect = 2.1e-20, Sum P(4) = 2.1e-20
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 540 ILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGRES 579
++ S+ LR+LP+ + N + +L + NQ + PG+ S
Sbjct: 744 VVRCSNKHLRALPKGIPKN--VTELYLDGNQFTLVPGQLS 781
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 270 (100.1 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 89/346 (25%), Positives = 165/346 (47%)
Query: 226 IIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSL 285
I E+ + FD L +L S ++ S P + +NL L L + N ++ + + L
Sbjct: 85 ITEVEPHTFDQAFNLNVLGFSGTMLTS--LPDNLF-QNLTALTTLTLSGNKLEVLPSSLL 141
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
L ++N ++L N +S + + F + + L+ + L N ++ + S TF L L ++
Sbjct: 142 TPLVNVNKLDLSKNLLSSLSEDAFR-GLDQ-LEMLMLQRNSIKQLHSSTFQGLSHLRSLF 199
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
L N L I F +L N+ + L N+I+ + N F + L KL L N+L
Sbjct: 200 LQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSG 259
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADS 465
+F N+ + + +L +N ++ L + P+ ++ L L +N + + N +
Sbjct: 260 IFLNLPNLT---HFSLYDNRLSRLMP--ETFGPMALQELWLYDNLLTHLEENVFSNLTN- 313
Query: 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
+R L + N I+++ AF L L+ +SL N + + F G+PNL I + N+I
Sbjct: 314 IRLLVISRNRIQYISPGAFNGLIELKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQIK 373
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT--IIEKLDISYN 569
+ + +L +L + +N L++LP+D F NT I+E + + N
Sbjct: 374 QIPIQLLDGVSRLSLLEMQNNSLQNLPKD-FLNTLSIVENVILHEN 418
Score = 253 (94.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 85/337 (25%), Positives = 158/337 (46%)
Query: 218 SLSFNKLQIIELNSNVFDVF-EKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
+L + I L + F F E L L S N E + ++ N L L
Sbjct: 52 ALVISNTSIQSLKPSDFQTFAETLTLFVAKNS--NITEVEPHTFDQAFN-LNVLGFSGTM 108
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
+ ++ + NLT+L + L NK+ + ++L ++ + ++ LS N L + D F
Sbjct: 109 LTSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVN--VNKLDLSKNLLSSLSEDAFR 166
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
L +L + L N +K + +++F+ L+++ ++ L N++ I F +L NL L LQD
Sbjct: 167 GLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQD 226
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
NK++ N+F+ + Q L LS+N ++ L P + L +NR+ +
Sbjct: 227 NKIEQLPANLFAKV---QKLKKLYLSSNRLSLLPSGIFLNLP-NLTHFSLYDNRLSRL-- 280
Query: 457 NFLQTFAD-SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
+TF +L++L+L N + HL+ F NL + LL + N I + F G+ L+
Sbjct: 281 -MPETFGPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELK 339
Query: 516 IIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
+ L N ++ + F L ++I +N+++ +P
Sbjct: 340 EVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIP 376
Score = 204 (76.9 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 83/361 (22%), Positives = 157/361 (43%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNK-LSVLNMATLYS--NVTKLQHLGT--T 129
L I+NT I+ L F E +TL ++ N ++ + T N+ L GT T
Sbjct: 53 LVISNTSIQSLKPSDFQTFA--ETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTMLT 110
Query: 130 ILKDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXX 188
L D + NK+ L +L L ++ K + N D +
Sbjct: 111 SLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLV-NVNKLDLSKNLLSSLSEDAFRGLD 169
Query: 189 XXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS 248
+ N I L+ + F+ L +L+ L L N+L ++ + +FD L++L + +
Sbjct: 170 QLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELT--DIPAGLFDDLVNLEVLHLQDN 227
Query: 249 LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNL 308
+ P + K + L+ L + +N + + + NL +L + +L N++S++
Sbjct: 228 KIE--QLPANLFAK-VQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPET 284
Query: 309 FHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNI 368
F L+E+ L +N L +E + F NL + + +S N ++ I +F L + +
Sbjct: 285 FG---PMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELKEV 341
Query: 369 VLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITN 428
L N++ I P F LPNL + +++N++K + + ++ L + NN + N
Sbjct: 342 SLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSL---LEMQNNSLQN 398
Query: 429 L 429
L
Sbjct: 399 L 399
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 62/219 (28%), Positives = 99/219 (45%)
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ-IKYIYPNAFVNLPNLVKLDLQDNKL 399
+N + +S ++S+K + F+ L + ++ N I + P+ F NL L L
Sbjct: 50 INALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTML 109
Query: 400 KDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFL 459
N+F N+T+ T L LS N + L + + + LDLS N + + +
Sbjct: 110 TSLPDNLFQNLTALTT---LTLSGNKLEVL-PSSLLTPLVNVNKLDLSKNLLSSLSEDAF 165
Query: 460 QTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
+ D L L L N IK L ++ F L L L L+ N + + F + NL+++ L
Sbjct: 166 RGL-DQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHL 224
Query: 520 SFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
N+I L F KL+ L +S NRL LP +F N
Sbjct: 225 QDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLN 263
Score = 151 (58.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 78/340 (22%), Positives = 136/340 (40%)
Query: 42 FNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTL 101
FN L L +G L + + F N+ A LTL + ++E LPS L + N+ + L
Sbjct: 97 FN--LNVLGFSGTMLTSLPDNLFQNLTALTTLTL--SGNKLEVLPSSLLTPLVNVNK--L 150
Query: 102 DLSHNKLSVLNMATLYSNVTKLQHL--GTTILKDREKXX----XXXXXXXXRCNKITDLN 155
DLS N LS L+ + + +L+ L +K + N++TD+
Sbjct: 151 DLSKNLLSSLS-EDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIP 209
Query: 156 GNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQ 215
LF L V +N E ++ N+++ L +F +L NL
Sbjct: 210 AGLFDDLVNLEV-LHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLT 268
Query: 216 ELSLSFNKLQIIELNSNVFD--VFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMD 273
SL N+L L F ++L L + + N F NL + L +
Sbjct: 269 HFSLYDNRLS--RLMPETFGPMALQELWLYDNLLTHLEENVF------SNLTNIRLLVIS 320
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
N I+ I + L L ++L N+++ I +F + L I + NN ++ I
Sbjct: 321 RNRIQYISPGAFNGLIELKEVSLHTNRLTNIEPGIFR-GL-PNLANISIENNQIKQIPIQ 378
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
+ L+ + + N L+++ L+ + N++L N
Sbjct: 379 LLDGVSRLSLLEMQNNSLQNLPKDFLNTLSIVENVILHEN 418
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 43/130 (33%), Positives = 65/130 (50%)
Query: 2 TLDLSHNKLSVL--NMATLYSNVTKLQHLGTTILKG---DQLQGIFNSKLRELEITGKDL 56
TL LS NKL VL ++ T NV KL L +L D +G+ +L L + +
Sbjct: 125 TLTLSGNKLEVLPSSLLTPLVNVNKLD-LSKNLLSSLSEDAFRGL--DQLEMLMLQRNSI 181
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL 116
K + S F + L L+ ++ ++P+GLFD + N+E L L NK+ L A L
Sbjct: 182 KQLHSSTFQGLSHLRSLFLQ--QNELTDIPAGLFDDLVNLE--VLHLQDNKIEQLP-ANL 236
Query: 117 YSNVTKLQHL 126
++ V KL+ L
Sbjct: 237 FAKVQKLKKL 246
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 165 (63.1 bits), Expect = 2.6e-20, Sum P(4) = 2.6e-20
Identities = 44/135 (32%), Positives = 72/135 (53%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ I LE N I I F + +++L+ I LSNN + I D F L+ LN++ L N
Sbjct: 310 TMTEIRLELNGIKSIPPGAF--SPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
+ + F L + ++L+ N+I I P+AF +L NL L L DNK++ F++
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 427
Query: 410 ITSKQTPMNLNLSNN 424
+ + QT L+L+ N
Sbjct: 428 LRAIQT---LHLAQN 439
Score = 162 (62.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 52/167 (31%), Positives = 82/167 (49%)
Query: 360 KNL-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPM 417
KN+ N + L+ N I I+ N F L L L L +N++ F ++ ++ +
Sbjct: 57 KNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRL 116
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
N N + L++N+ QA + LDLS N IQ +P + D L+ L LD N+I
Sbjct: 117 NRNQLHMLPELLFQNN--QA---LSRLDLSENAIQAIPRKAFRGATD-LKNLQLDKNQIS 170
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ AF L LE+L+L +NNI + +F MP L+ L N +
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 158 (60.7 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 47/167 (28%), Positives = 81/167 (48%)
Query: 262 KNL--NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
KN+ NT E L ++ NNI I L L + L N+I + F + K L+
Sbjct: 57 KNIPRNT-ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAF--DDMKELER 113
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+RL+ N L ++ F N + L+ + LS N +++I +F+ ++ N+ L NQI I
Sbjct: 114 LRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIE 173
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
AF L L L L +N + ++ F+++ +T L +N++
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT---FRLHSNHL 217
Score = 148 (57.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 89/343 (25%), Positives = 146/343 (42%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N++ I+E +F+KL L +I+ S +E + E L +
Sbjct: 544 ELRLNNNEISILEATG----MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSE-LHLTA 598
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N +++IR+ L L + L N+IS IHN+ F + RL + L +N + +
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRL--LSLYDNQITTVSPGA 656
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLPNLVK-L 392
F L+ L+T+ NLL + F N N L + + + K + N P+ ++ +
Sbjct: 657 FDTLQSLSTL----NLLAN----PF-NCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQI 707
Query: 393 DLQDNKLKDFNLNVFSN----ITSKQTPMNLNLSNNYI--TNLYEND-KKQAPIYIKSLD 445
LQD DF + Q P + + +N + K P + L
Sbjct: 708 PLQDVAFPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIPKNVTELY 767
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L TF L+ + L N+I L ++F N+ L L L +N + +
Sbjct: 768 LDGNQFTLVPGQ-LSTFK-YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F G+ +L+++ L N+IS L F L L I N L
Sbjct: 826 LAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPL 868
Score = 143 (55.4 bits), Expect = 2.6e-20, Sum P(4) = 2.6e-20
Identities = 37/133 (27%), Positives = 71/133 (53%)
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
Q+ L L+NN I+ L + ++K ++LSNN++ E+ + A S+ +L+L
Sbjct: 540 QSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTA 598
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+++ + + F LD L L L +N I+ + +F G+ N++++ L N+I+ ++ F
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFD 658
Query: 534 FSFKLRILNISHN 546
L LN+ N
Sbjct: 659 TLQSLSTLNLLAN 671
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 413 KQTPMN---LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
K P N L L+ N IT +++ND ++ L L N+I V + L +L
Sbjct: 57 KNIPRNTERLELNGNNITRIHKNDFAGLK-QLRVLQLMENQIGAVERGAFDDMKE-LERL 114
Query: 470 YLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG 529
L+ N++ L F N L L L N I + ++ F G +L+ + L N+IS +
Sbjct: 115 RLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEE 174
Query: 530 EQFYFSFKLRILNISHNRLRSLPRDVFSN 558
F L +L +++N + ++P F++
Sbjct: 175 GAFRALRGLEVLTLNNNNITTIPVSSFNH 203
Score = 116 (45.9 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P + + L N I+ +P + LR++ L N+I + AF L L L L
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + + F G+ LQ++ L+ N+I+ + + F L +L++ N+++SL + F+
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Query: 558 NT-IIEKLDISYN 569
+ I+ L ++ N
Sbjct: 427 SLRAIQTLHLAQN 439
Score = 113 (44.8 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 41/154 (26%), Positives = 71/154 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT ++ N F L L+ L L N++ +E + FD ++L+ L ++ + + P
Sbjct: 71 NNITRIHKNDFAGLKQLRVLQLMENQIGAVERGA--FDDMKELERLRLNRNQLHM--LPE 126
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ N L L + N I+ I + T L + L+ N+IS I F + L
Sbjct: 127 LLFQNN-QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFR--ALRGL 183
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+ + L+NN + I +F ++ +L T L N L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 101 (40.6 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 34/136 (25%), Positives = 67/136 (49%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIAV 502
++ S+ ++ ++P Q+ A+ L L+ NEI L+AT F L L+ ++L +N ++
Sbjct: 524 VECSSLKLTKIPERIPQSTAE----LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSE 579
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-I 561
+ F G ++ + L+ N++ + F LR L + +NR+ + D F+ +
Sbjct: 580 IEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNV 639
Query: 562 EKLDISYNQ-DKIRPG 576
L + NQ + PG
Sbjct: 640 RLLSLYDNQITTVSPG 655
Score = 97 (39.2 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
SN ++ +P + ++ +LYLD N+ L L+L+ L +N I+ +
Sbjct: 748 SNKHLRALP----KGIPKNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNS 802
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLD 565
+F M L + LS+N + + F LR+L++ N + +L +F++ T + L
Sbjct: 803 SFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLA 862
Query: 566 ISYN 569
I N
Sbjct: 863 IGAN 866
Score = 97 (39.2 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N IK+I + L I+L N+I++I + F + + L +
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQ-GL-RSLNSLV 363
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + I+ +F++L N+ + L N+I+ +
Sbjct: 364 LYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKG 423
Query: 382 AFVNLPNLVKLDLQDNK-LKDFNL 404
F +L + L L N + D NL
Sbjct: 424 TFTSLRAIQTLHLAQNPFICDCNL 447
Score = 88 (36.0 bits), Expect = 3.2e-14, Sum P(3) = 3.2e-14
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELL 493
++ P L L+NN I + + L+K+ L N++ ++ AF G V EL
Sbjct: 536 ERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSEL- 594
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + F G+ L+ + L N IS + + F +R+L++ N++ ++
Sbjct: 595 HLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSP 654
Query: 554 DVF 556
F
Sbjct: 655 GAF 657
Score = 79 (32.9 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 68/322 (21%), Positives = 126/322 (39%)
Query: 43 NSKLRELEITGKDLKFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTL 101
N L L+++ ++ I AF DL L++ QI + G F + +E +TL
Sbjct: 132 NQALSRLDLSENAIQAIPRKAFRGAT---DLKNLQLDKNQISCIEEGAFRALRGLEVLTL 188
Query: 102 D---------LSHNKLSVLNMATLYSNVTKLQ-HLGTTILKDREKXXXXXXXXXXRCNKI 151
+ S N + L L+SN HL R++ +C+
Sbjct: 189 NNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT---QCSGP 245
Query: 152 TDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHL 211
L G +QKS + +V N I D G +
Sbjct: 246 ASLRGLNVAEVQKSEFSC--SGQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAI 303
Query: 212 -YNLQELSLSFNKLQIIELNS---NVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
NL E +++ +L++ + S F + KL+ +++S + + P + L +L
Sbjct: 304 PANLPE-TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQI-AEIAPDAF--QGLRSL 359
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
L + N I ++ L +L + L NKI+ I + F ++ + L + L +N +
Sbjct: 360 NSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQ-DL-QNLSLLSLYDNKI 417
Query: 328 ELIESDTFYNLKELNTITLSYN 349
+ + TF +L+ + T+ L+ N
Sbjct: 418 QSLAKGTFTSLRAIQTLHLAQN 439
Score = 67 (28.6 bits), Expect = 2.6e-20, Sum P(4) = 2.6e-20
Identities = 25/97 (25%), Positives = 45/97 (46%)
Query: 30 TTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGL 89
T I K D G+ +LR L++ + ++ AFD++ L++ Q+ LP L
Sbjct: 74 TRIHKND-FAGL--KQLRVLQLMENQIGAVERGAFDDMKELE--RLRLNRNQLHMLPELL 128
Query: 90 FDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
F + + + LDLS N + + + T L++L
Sbjct: 129 FQNNQALSR--LDLSENAIQAIPRKA-FRGATDLKNL 162
Score = 65 (27.9 bits), Expect = 4.2e-20, Sum P(4) = 4.2e-20
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 29 GTTI-LKGDQLQGIFNSKLRE---LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEE 84
GTT+ G LQ I + R LE+ G ++ I + F + L++ QI
Sbjct: 42 GTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLR--VLQLMENQIGA 99
Query: 85 LPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ G FD ++ +E+ L L+ N+L +L L+ N L L
Sbjct: 100 VERGAFDDMKELER--LRLNRNQLHMLP-ELLFQNNQALSRL 138
Score = 60 (26.2 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
NKI + + F+ L NL LSL NK+Q L F +Q L ++ + F
Sbjct: 391 NKINCIRPDAFQDLQNLSLLSLYDNKIQ--SLAKGTFTSLRAIQTLHLAQNPF 441
Score = 48 (22.0 bits), Expect = 2.6e-20, Sum P(4) = 2.6e-20
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 540 ILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGRES 579
++ S+ LR+LP+ + N + +L + NQ + PG+ S
Sbjct: 744 VVRCSNKHLRALPKGIPKN--VTELYLDGNQFTLVPGQLS 781
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 272 (100.8 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 84/301 (27%), Positives = 145/301 (48%)
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
++ N I NI + + L L ++L+YN+I +H F + RL+E+ L NN L+ +
Sbjct: 65 SLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFE-KL-SRLEELYLGNNLLQAL 122
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
T L++L + + N + + SF+ L +++ + L N + + F L NL+
Sbjct: 123 VPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLL 182
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNN 449
L L+ N+++ N FS + + LNLS N + + P+ + +L LS N
Sbjct: 183 YLHLESNRIRFLGKNAFSQLGKLRF---LNLSANELQPSLRHAATFVPLRSLSTLILSAN 239
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+Q + Q L L L N++ HL AF L+ L L LE N + +
Sbjct: 240 SLQHLGPRVFQHLP-RLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLE 298
Query: 510 GMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS-NTIIEKLDISY 568
+ +L+ +DLS NE+S L F +LR L++ N L +L D+F+ + + +LD+
Sbjct: 299 PLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDG 358
Query: 569 N 569
N
Sbjct: 359 N 359
Score = 185 (70.2 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 79/281 (28%), Positives = 133/281 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I L+ F L L+EL L N LQ + V L+ L I ++ N NE
Sbjct: 93 NQIRSLHPKTFEKLSRLEELYLGNNLLQAL-----VPGTLAPLRKLRILYA--NGNEIGR 145
Query: 258 YILN--KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L +L L +D N + + + L +L Y++LE N+I + N F + K
Sbjct: 146 LSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFS-QLGK 204
Query: 316 RLKEIRLSNNYLE--LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L+ + LS N L+ L + TF L+ L+T+ LS N L+ + F++L + + LS N
Sbjct: 205 -LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGN 263
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
Q+ ++ P AF L L +L L+ N+L L + + S + L+LS N ++ L+
Sbjct: 264 QLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEA---LDLSGNELSALHPAT 320
Query: 434 KKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
++ L L +N + + + + +L +L LD N
Sbjct: 321 FGHQG-RLRELSLRDNALSALSGDIFAA-SPALYRLDLDGN 359
Score = 153 (58.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/220 (25%), Positives = 97/220 (44%)
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+++ T +L N + +I F L + + L +NQI+ ++P F L L +L L +N
Sbjct: 59 QDVLTYSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNL 118
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNF 458
L+ + + + L + N I L + +K L L N + +P
Sbjct: 119 LQALVPGTLAPLRKLRI---LYANGNEIGRLSRGSFEGLESLVK-LRLDGNVLGALPDAV 174
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR--TFIGMPNLQI 516
+ L L+L+ N I+ L AF L L L+L N + ++ TF+ + +L
Sbjct: 175 FAPLGNLLY-LHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLST 233
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ LS N + L F +L +L++S N+L L + F
Sbjct: 234 LILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAF 273
Score = 140 (54.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 65/225 (28%), Positives = 101/225 (44%)
Query: 351 LKSI-KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L+++ KT+S + ++L L N I I F L L +LDLQ N+++ + F
Sbjct: 46 LRAVPKTSSLPSPQDVLTYSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEK 105
Query: 410 ITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRK 468
++ + L L NN + L AP+ ++ L + N I + + +SL K
Sbjct: 106 LSRLE---ELYLGNNLLQALVPGTL--APLRKLRILYANGNEIGRLSRGSFEGL-ESLVK 159
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI--SM 526
L LD N + L F L L L LE N I + K F + L+ ++LS NE+ S+
Sbjct: 160 LRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSL 219
Query: 527 LTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
F L L +S N L+ L VF + + L +S NQ
Sbjct: 220 RHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
>UNIPROTKB|Q65Z91 [details] [associations]
symbol:TSKU "Tsukushin" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0021540
"corpus callosum morphogenesis" evidence=IEA] [GO:0021670 "lateral
ventricle development" evidence=IEA] [GO:0021960 "anterior
commissure morphogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0007275 GO:GO:0005576
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:AB100033 EMBL:AB195969 IPI:IPI00682643
IPI:IPI00775744 RefSeq:NP_001005346.1 UniGene:Gga.43824
ProteinModelPortal:Q65Z91 STRING:Q65Z91 GeneID:419088
KEGG:gga:419088 CTD:25987 HOGENOM:HOG000001578 HOVERGEN:HBG054643
InParanoid:Q65Z91 KO:K08130 OrthoDB:EOG4V171F NextBio:20822199
Uniprot:Q65Z91
Length = 369
Score = 258 (95.9 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 81/238 (34%), Positives = 129/238 (54%)
Query: 322 LSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
LS+N LE I T L ++ LSYN + I +T+F L + ++ LS N ++ +
Sbjct: 67 LSSNKLETINESMLTGPGYTTLVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLP 126
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
+ F + P L +DL +NKL D L+VF++ + P+N++LSNN ++ + N +K P
Sbjct: 127 EDCFSSSP-LGDIDLSNNKLLDIALDVFAS-KGQGKPLNVDLSNNMLSKITRNHEKSIP- 183
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH-N 498
I++L+LS NR+ VP N LQ LR L LD N + ++ F L L LSL +
Sbjct: 184 NIQNLNLSGNRLTSVP-N-LQGIP--LRYLNLDGNPLAKIEKGDFKGLKGLIHLSLSGLH 239
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFN-EISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
+ + +F +P LQ++DLS N + LT E + ++ LN+S + SLP+ V
Sbjct: 240 DFRELSPYSFKELPALQVLDLSNNPNLRSLTAEVIFGLNSIQELNLSGTGVSSLPKTV 297
Score = 163 (62.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 61/258 (23%), Positives = 120/258 (46%)
Query: 292 NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+Y++L NK+ I+ ++ + L + LS N + I S TF L+ L ++ LS+N L
Sbjct: 63 SYLDLSSNKLETINESMLTGPGYTTLVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSL 122
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN--LVKLDLQDNKLKDFNLNVFSN 409
+ + F + + + +I LS N++ I + F + + +DL +N L N +
Sbjct: 123 EVLPEDCFSS-SPLGDIDLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLSKITRNHEKS 181
Query: 410 ITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
I + Q NLNLS N +T++ Q I ++ L+L N + ++ + +
Sbjct: 182 IPNIQ---NLNLSGNRLTSV---PNLQG-IPLRYLNLDGNPLAKIEKGDFKGLKGLIHLS 234
Query: 470 YLDFNEIKHLDATAFGNLDVLELLSLEHN-NIAVVVKRTFIGMPNLQIIDLSFNEISMLT 528
++ + L +F L L++L L +N N+ + G+ ++Q ++LS +S L
Sbjct: 235 LSGLHDFRELSPYSFKELPALQVLDLSNNPNLRSLTAEVIFGLNSIQELNLSGTGVSSLP 294
Query: 529 GEQFYFSFKLRILNISHN 546
+ L+ + + N
Sbjct: 295 KTVLKYLPSLKSITLRKN 312
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 268 (99.4 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 85/298 (28%), Positives = 145/298 (48%)
Query: 279 NIRNYSLYNLT-----SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
N RN L ++ S ++ L N IS I+ + +H L + L N+ + +
Sbjct: 45 NCRNLGLSSIPKNFPESTVFLYLTGNNISYINESELT-GLHS-LVALYLDNSNILYVYPK 102
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
F L+ L + L+ N +K + FK L N+ N+ L +NQ+ ++ F +L ++ L+
Sbjct: 103 AFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLN 162
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE 453
LQ N+L F + + + L+LSNN I + E+ + + L L +N + +
Sbjct: 163 LQRNRLTVLGSGTFVGMVALRI---LDLSNNNILRISESGFQHLE-NLACLYLGSNNLTK 218
Query: 454 VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
VP N + SLR+L L N I+ + AF L LE L L+++ I V + F G+ N
Sbjct: 219 VPSNAFEVLK-SLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINN 277
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN--TIIEKLDISYN 569
L+ + LS N++ L + F L L + NR+ S+ D F N ++ L++S+N
Sbjct: 278 LKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFN 335
Score = 223 (83.6 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 86/305 (28%), Positives = 150/305 (49%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIEL-NSNVFDVFEK--LQLLEISFSLFNSNEFPYYI 259
L GN ++ N EL+ + L + L NSN+ V+ K +QL + F LF +N F +
Sbjct: 67 LTGNNISYI-NESELT-GLHSLVALYLDNSNILYVYPKAFVQLRHLYF-LFLNNNFIKRL 123
Query: 260 ---LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ K L L L + N + + +L S+ Y+NL+ N+++ + + F + R
Sbjct: 124 DPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALR 183
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
+ ++ +NN L + ES F +L+ L + L N L + + +F+ L ++ + LS N I+
Sbjct: 184 ILDLS-NNNILRISESG-FQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIE 241
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
I P AF L NL L L+++++++ + FS I + + +L LS+N + NL +
Sbjct: 242 AIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLK---HLILSHNDLENLNSDTFSL 298
Query: 437 AP--IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
IY+K L NRI + + + SL+ L L FN + L L L+
Sbjct: 299 LKNLIYLK---LDRNRIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLS--SLIH 353
Query: 495 LEHNN 499
L+ N+
Sbjct: 354 LQANS 358
Score = 214 (80.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 59/229 (25%), Positives = 112/229 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS---FSLFNSNE 254
N I L+ +F+ L NL+ L L +N++ + VF+ +Q L + ++ S
Sbjct: 118 NFIKRLDPGIFKGLLNLRNLYLQYNQVSFVP--RGVFNDLVSVQYLNLQRNRLTVLGSGT 175
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
F + L L + NNNI I +L +L + L N ++K+ +N F +
Sbjct: 176 FVGMV------ALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFE--VL 227
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K L+ + LS+N +E I+ F L L + L + ++++ F +NN+ +++LS N
Sbjct: 228 KSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHND 287
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
++ + + F L NL+ L L N++ + + F N+ + +NL+ +N
Sbjct: 288 LENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNN 336
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 75/282 (26%), Positives = 131/282 (46%)
Query: 245 ISFSLFNSNEFPYYILNK---NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
++ L NSN Y+ K L L +L ++NN IK + L +L + L+YN++
Sbjct: 87 VALYLDNSNIL--YVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQV 144
Query: 302 SKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKN 361
S + +F+ + ++ + L N L ++ S TF + L + LS N + I + F++
Sbjct: 145 SFVPRGVFNDLVS--VQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQH 202
Query: 362 LNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNL 421
L N+ + L N + + NAF L +L +L L N ++ F + + + L L
Sbjct: 203 LENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEY---LLL 259
Query: 422 SNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA 481
N+ I N+ D +K L LS+N ++ + + + +L L LD N I +D
Sbjct: 260 KNSRIRNV-TRDGFSGINNLKHLILSHNDLENLNSDTF-SLLKNLIYLKLDRNRIISIDN 317
Query: 482 TAFGNLDV-LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
F N+ L++L+L NN+ + R P +I L N
Sbjct: 318 DTFENMGASLKILNLSFNNLTALHPRVL--KPLSSLIHLQAN 357
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 74/287 (25%), Positives = 134/287 (46%)
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+L + NNI I L L SL + L+ + I ++ F H L + L+NN+++
Sbjct: 64 FLYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAFVQLRH--LYFLFLNNNFIK 121
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
++ F L L + L YN + + F +L ++ + L N++ + FV +
Sbjct: 122 RLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVA 181
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L LDL +N + + + F ++ + L L +N +T + N + ++ L LS+
Sbjct: 182 LRILDLSNNNILRISESGFQHLENLAC---LYLGSNNLTKVPSNAFEVLKS-LRRLSLSH 237
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
N I+ + + A+ L L L + I+++ F ++ L+ L L HN++ + TF
Sbjct: 238 NPIEAIQPFAFKGLAN-LEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTF 296
Query: 509 IGMPNLQIIDLSFNEISMLTGEQFY-FSFKLRILNISHNRLRSL-PR 553
+ NL + L N I + + F L+ILN+S N L +L PR
Sbjct: 297 SLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLTALHPR 343
Score = 193 (73.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 72/265 (27%), Positives = 127/265 (47%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L++L L +DN+NI + + L L ++ L N I ++ +F ++ L+ + L
Sbjct: 83 LHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLN--LRNLYLQ 140
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N + + F +L + + L N L + + +F + + + LS N I I + F
Sbjct: 141 YNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGF 200
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
+L NL L L N L N F + S + L+LS+N I + K ++
Sbjct: 201 QHLENLACLYLGSNNLTKVPSNAFEVLKSLR---RLSLSHNPIEAIQPFAFKGLA-NLEY 256
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N+RI+ V + ++L+ L L N++++L++ F L L L L+ N I +
Sbjct: 257 LLLKNSRIRNVTRDGFSGI-NNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISI 315
Query: 504 VKRTFIGM-PNLQIIDLSFNEISML 527
TF M +L+I++LSFN ++ L
Sbjct: 316 DNDTFENMGASLKILNLSFNNLTAL 340
Score = 190 (71.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 90/340 (26%), Positives = 144/340 (42%)
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMT--LDLSHNKLSVLNMATLYSNVTKLQHLG 127
C + T QI GL +N + T L L+ N +S +N S +T L L
Sbjct: 32 CSSVCQLCTGRQINCRNLGLSSIPKNFPESTVFLYLTGNNISYINE----SELTGLHSLV 87
Query: 128 TTILKDREKXXXXXXXXXXRCNKI--TDLNGNLFRHLQKSIVKAKKNNNN---NEDQVSD 182
L D + + LN N + L I K N N +QVS
Sbjct: 88 ALYL-DNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSF 146
Query: 183 REKXXXXXXXXXX----RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFE 238
+ + N++T L F + L+ L LS N I+ ++ + F E
Sbjct: 147 VPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNN--ILRISESGFQHLE 204
Query: 239 KLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEY 298
L L + + N + P L +L L++ +N I+ I+ ++ L +L Y+ L+
Sbjct: 205 NLACLYLGSN--NLTKVPSNAFEV-LKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKN 261
Query: 299 NKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS 358
++I + + F I+ LK + LS+N LE + SDTF LK L + L N + SI +
Sbjct: 262 SRIRNVTRDGFS-GINN-LKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDT 319
Query: 359 FKNLNNMLNIV-LSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
F+N+ L I+ LSFN + ++P L +L+ L N
Sbjct: 320 FENMGASLKILNLSFNNLTALHPRVLKPLSSLIHLQANSN 359
Score = 169 (64.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 55/194 (28%), Positives = 94/194 (48%)
Query: 385 NLP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
N P + V L L N + N S +T + + L L N+ I +Y Q ++
Sbjct: 57 NFPESTVFLYLTGNNISYINE---SELTGLHSLVALYLDNSNILYVYPKAFVQLR-HLYF 112
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L+NN I+ + + + LR LYL +N++ + F +L ++ L+L+ N + V+
Sbjct: 113 LFLNNNFIKRLDPGIFKGLLN-LRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVL 171
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIE 562
TF+GM L+I+DLS N I ++ F L L + N L +P + F +
Sbjct: 172 GSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLR 231
Query: 563 KLDISYNQ-DKIRP 575
+L +S+N + I+P
Sbjct: 232 RLSLSHNPIEAIQP 245
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 63/301 (20%), Positives = 127/301 (42%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L +TG ++ +I+ S + + + L + N+ I + F ++ ++ + L+ + K
Sbjct: 65 LYLTGNNISYINESELTGLHSL--VALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKR 122
Query: 109 -------SVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRH 161
+LN+ LY ++ + + D + N++T L F
Sbjct: 123 LDPGIFKGLLNLRNLYLQYNQVSFVPRGVFND----LVSVQYLNLQRNRLTVLGSGTF-- 176
Query: 162 LQKSIVKAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLS 220
+ ++ +NNN ++S+ + N +T + N F L +L+ LSLS
Sbjct: 177 VGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLS 236
Query: 221 FNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
N ++ I+ F L+ L + S + + +N L+ L + +N+++N+
Sbjct: 237 HNPIEAIQ--PFAFKGLANLEYLLLKNSRIRNVTRDGF---SGINNLKHLILSHNDLENL 291
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE 340
+ + L +L Y+ L+ N+I I N+ F N+ LK + LS N L + L
Sbjct: 292 NSDTFSLLKNLIYLKLDRNRIISIDNDTFE-NMGASLKILNLSFNNLTALHPRVLKPLSS 350
Query: 341 L 341
L
Sbjct: 351 L 351
>ZFIN|ZDB-GENE-050506-80 [details] [associations]
symbol:lrrtm1 "leucine rich repeat transmembrane
neuronal 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050506-80 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CU076051 CTD:347730
HOGENOM:HOG000290681 HOVERGEN:HBG052362 KO:K16665 OMA:EPDLFHG
IPI:IPI00493041 RefSeq:XP_003197743.1 UniGene:Dr.12811
ProteinModelPortal:B8JKM0 IntAct:B8JKM0 Ensembl:ENSDART00000133917
GeneID:570385 KEGG:dre:570385 NextBio:20890105 ArrayExpress:B8JKM0
Bgee:B8JKM0 Uniprot:B8JKM0
Length = 524
Score = 266 (98.7 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 75/262 (28%), Positives = 135/262 (51%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+NL++ L++ NNI +R + L+ L ++ L++N I + + F + +R+KE+
Sbjct: 64 QNLSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFE-RL-RRIKELD 121
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N +E + + TF L L + LSYN L+S++ F L + N+ L +N +K+I
Sbjct: 122 LSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVR 181
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F + ++ LDL N+L+ N F+ + K T ++L + NL + I +
Sbjct: 182 IFQDCRSMQFLDLGYNQLQSLARNSFAGLF-KLTELHLEHNELVKVNLAHFPRL---ISL 237
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
++L + NN+ V VN L+ D L K+ NEI++++ F ++ L L L+ N +
Sbjct: 238 RTLYMRNNKATIV-VNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLT 296
Query: 502 VVVKRTFIGMPNLQIIDLSFNE 523
+ +R +L I LS N+
Sbjct: 297 YIDQRILDSWTSLSSITLSGND 318
Score = 260 (96.6 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 81/301 (26%), Positives = 139/301 (46%)
Query: 199 KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYY 258
KI L G L L L + ++ N+ L L E + S F
Sbjct: 32 KIVPLVGGSCPRLCRCDNKQLYCEGLNLTDIPQNLSSAIG-LSLRENNISELREGNFV-- 88
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
L+ L WL +D+NNI+ + + L + ++L N+I + N F + R+
Sbjct: 89 ----GLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLPNGTFRPLPNLRIL 144
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ LS N L+ +E D F+ L++L + L YN LK I F++ +M + L +NQ++ +
Sbjct: 145 D--LSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSL 202
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
N+F L L +L L+ N+L NL F + S +T L + NN T + N +
Sbjct: 203 ARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRT---LYMRNNKAT-IVVNTLEWTW 258
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
Y++ +D SNN I+ + + ++ L L LD N++ ++D + L ++L N
Sbjct: 259 DYLEKIDFSNNEIEYIEPHVFES-VPKLNTLMLDSNKLTYIDQRILDSWTSLSSITLSGN 317
Query: 499 N 499
+
Sbjct: 318 D 318
Score = 193 (73.0 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 67/250 (26%), Positives = 122/250 (48%)
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
NN EL E + F L +L + L +N ++ ++ ++F+ L + + LS N+I+ + F
Sbjct: 77 NNISELREGN-FVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLPNGTF 135
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN-NYI-TNLYENDKKQAPIYI 441
LPNL LDL N+L+ ++F + K T ++L + +I ++++ + +
Sbjct: 136 RPLPNLRILDLSYNRLQSLEPDLFHGLR-KLTNLHLRYNALKFIPVRIFQDCRS-----M 189
Query: 442 KSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
+ LDL N++Q + N F F L +L+L+ NE+ ++ F L L L + +N
Sbjct: 190 QFLDLGYNQLQSLARNSFAGLF--KLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKA 247
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-T 559
+VV L+ ID S NEI + F KL L + N+L + + + + T
Sbjct: 248 TIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLTYIDQRILDSWT 307
Query: 560 IIEKLDISYN 569
+ + +S N
Sbjct: 308 SLSSITLSGN 317
Score = 168 (64.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 45/129 (34%), Positives = 71/129 (55%)
Query: 444 LDLSNNRIQEVPV-NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L L N I E+ NF+ L LYLD N I+ ++ +AF L ++ L L N I
Sbjct: 72 LSLRENNISELREGNFVGL--SQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIES 129
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-II 561
+ TF +PNL+I+DLS+N + L + F+ KL L++ +N L+ +P +F + +
Sbjct: 130 LPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSM 189
Query: 562 EKLDISYNQ 570
+ LD+ YNQ
Sbjct: 190 QFLDLGYNQ 198
Score = 167 (63.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 48/164 (29%), Positives = 80/164 (48%)
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
NL + + L L++N + + F + S+ T + L+ +N + E + IK L
Sbjct: 65 NLSSAIGLSLRENNISELREGNFVGL-SQLTWLYLDHNN---IEIVEESAFERLRRIKEL 120
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
DLS NRI+ +P + + LR L L +N ++ L+ F L L L L +N + +
Sbjct: 121 DLSTNRIESLPNGTFRPLPN-LRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIP 179
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
R F ++Q +DL +N++ L F FKL L++ HN L
Sbjct: 180 VRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNEL 223
Score = 166 (63.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 52/201 (25%), Positives = 101/201 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF-P 256
N+I L FR L NL+ L LS+N+LQ +E ++F KL L + + N+ +F P
Sbjct: 125 NRIESLPNGTFRPLPNLRILDLSYNRLQSLE--PDLFHGLRKLTNLHLRY---NALKFIP 179
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
I ++ ++++L + N ++++ S L L ++LE+N++ K+ NL HF
Sbjct: 180 VRIF-QDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKV--NLAHFPRLIS 236
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + + NN ++ + + L I S N ++ I+ F+++ + ++L N++
Sbjct: 237 LRTLYMRNNKATIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLT 296
Query: 377 YIYPNAFVNLPNLVKLDLQDN 397
YI + +L + L N
Sbjct: 297 YIDQRILDSWTSLSSITLSGN 317
>FB|FBgn0029114 [details] [associations]
symbol:Tollo "Tollo" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0007352 "zygotic specification of dorsal/ventral
axis" evidence=IEA] [GO:0006963 "positive regulation of
antibacterial peptide biosynthetic process" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0009620 "response to fungus" evidence=IEA] [GO:0060049
"regulation of protein glycosylation" evidence=IMP] [GO:0048935
"peripheral nervous system neuron development" evidence=IMP]
[GO:0002227 "innate immune response in mucosa" evidence=IMP]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027202
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 EMBL:AE014296 InterPro:IPR003591 SMART:SM00369
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0004888
GO:GO:0002227 GO:GO:0048935 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00700000104286 GO:GO:0060049 SUPFAM:SSF52200
PANTHER:PTHR24371:SF0 HSSP:O60603 FlyBase:FBgn0029114 EMBL:AF204158
EMBL:AF247764 EMBL:AY118551 RefSeq:NP_524757.1 UniGene:Dm.3403
SMR:Q9V477 IntAct:Q9V477 MINT:MINT-316842 STRING:Q9V477
EnsemblMetazoa:FBtr0075607 GeneID:44497 KEGG:dme:Dmel_CG6890
UCSC:CG6890-RA CTD:44497 InParanoid:Q9V477 OMA:TIRTHNG
GenomeRNAi:44497 NextBio:837325 Uniprot:Q9V477
Length = 1346
Score = 273 (101.2 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 94/381 (24%), Positives = 179/381 (46%)
Query: 201 TDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYIL 260
+ L+ + FR L L++L++ + KL L F ++L+ L I + + +
Sbjct: 87 SSLSPDSFRSLVELRDLTIEYCKLG--NLTDGSFRGLQELRNLTIRTHNGDWSTMSLEMA 144
Query: 261 NKNL---NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR- 316
+ + LE L + NNI I + + L SL ++N YNKI I N F ++ R
Sbjct: 145 SNSFVEFRQLERLDLSLNNIWLIPDGMVCPLKSLQHLNASYNKIQDISNFYFSASLSSRK 204
Query: 317 -------LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV 369
L+ + LS N + + + L L + ++ N + + +F+ L ++ +
Sbjct: 205 ARVCGSTLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVD 264
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
LS N++ + P F L ++ L++N + +F + + L+L++N + +
Sbjct: 265 LSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAEL---LVLDLASNELNSQ 321
Query: 430 YENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLD 488
+ N + + LDLS N+I + + + A SL+ L L+ N I L F +L
Sbjct: 322 WINAATFVGLKRLMMLDLSANKISRLEAHIFRPLA-SLQILKLEDNYIDQLPGGIFADLT 380
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L L L N I+V+ +RT G+ NL ++ L FN IS + +L+ L+++ N+L
Sbjct: 381 NLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKL 440
Query: 549 RSLPRDVFSNTIIEKLDISYN 569
+++P + +++ LD+ N
Sbjct: 441 QAVPEALAHVQLLKTLDVGEN 461
Score = 253 (94.1 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 118/494 (23%), Positives = 214/494 (43%)
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTK 122
+ +++A Y+ I+N S ++ +LDLS NK+ L A L S + +
Sbjct: 177 SLQHLNASYNKIQDISNFYFSASLSSRKARVCGSTLQSLDLSANKMVSLPTAML-SALGR 235
Query: 123 LQHLGT-----TILKDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNN 176
L HL + L DR + N++T L LF K + + NN+
Sbjct: 236 LTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANRLTSLPPELFAET-KQLQEIYLRNNSI 294
Query: 177 EDQVSDREKXXXXXXXXXXRCNKITD--LNGNLFRHLYNLQELSLSFNKLQIIELNSNVF 234
N++ +N F L L L LS NK+ +E +++F
Sbjct: 295 NVLAPGIFGELAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANKISRLE--AHIF 352
Query: 235 DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYI 294
LQ+L++ + + + P I +L L L + N I I +L L +L +
Sbjct: 353 RPLASLQILKLEDNYID--QLPGGIF-ADLTNLHTLILSRNRISVIEQRTLQGLKNLLVL 409
Query: 295 NLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+L++N+IS++ N +L+++ L++N L+ + + +++ L T+ + N++ I
Sbjct: 410 SLDFNRISRMDQRSL-VNC-SQLQDLHLNDNKLQAVP-EALAHVQLLKTLDVGENMISQI 466
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNL---------- 404
+ TS L ++ + ++ N + +I F + +L L+L NKLK
Sbjct: 467 ENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILNLSQNKLKSIEAGSLQRNSQLQ 526
Query: 405 ------NVFSNITSKQTPM-NL---NLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
N +I T + NL N+S N L + D PI ++ LD+ NRI ++
Sbjct: 527 AIRLDGNQLKSIAGLFTELPNLVWLNISGN---RLEKFDYSHIPIGLQWLDVRANRITQL 583
Query: 455 PVNFLQTFAD-SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
N+ + ++ SL +N + + A++ N +E+L L N I+ + TF PN
Sbjct: 584 G-NYFEIESELSLSTFDASYNLLTEITASSIPNS--VEVLYLNDNQISKIQPYTFFKKPN 640
Query: 514 LQIIDLSFNEISML 527
L +DL N ++ L
Sbjct: 641 LTRVDLVRNRLTTL 654
Score = 180 (68.4 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 78/340 (22%), Positives = 150/340 (44%)
Query: 214 LQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMD 273
LQ L LS NK+ + L + + +L L ++ NS F + L +L + +
Sbjct: 212 LQSLDLSANKM--VSLPTAMLSALGRLTHLNMAK---NSMSFLADRAFEGLLSLRVVDLS 266
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL--ELIE 331
N + ++ L I L N I+ + +F L + L++N L + I
Sbjct: 267 ANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIF--GELAELLVLDLASNELNSQWIN 324
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
+ TF LK L + LS N + ++ F+ L ++ + L N I + F +L NL
Sbjct: 325 AATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHT 384
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI 451
L L N++ + + + L+L N I+ + + ++ L L++N++
Sbjct: 385 LILSRNRISVIEQRTLQGLKNL---LVLSLDFNRISRMDQRSLVNCS-QLQDLHLNDNKL 440
Query: 452 QEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGM 511
Q VP L+ L + N I ++ T+ L+ L L + N++ + + F M
Sbjct: 441 QAVPEALAHV--QLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRM 498
Query: 512 PNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
+LQI++LS N++ + + +L+ + + N+L+S+
Sbjct: 499 SSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSI 538
Score = 179 (68.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 111/479 (23%), Positives = 207/479 (43%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGT-----TILKGDQLQGIFNSKLRELEITGKDL 56
+LDLS NK+ L A L S + +L HL + L +G+ + LR ++++ L
Sbjct: 214 SLDLSANKMVSLPTAML-SALGRLTHLNMAKNSMSFLADRAFEGLLS--LRVVDLSANRL 270
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSV--LNMA 114
+ P F ++ L+ N I L G+F ++ E + LDL+ N+L+ +N A
Sbjct: 271 TSLPPELFAETKQLQEIYLR--NNSINVLAPGIFGELA--ELLVLDLASNELNSQWINAA 326
Query: 115 TLYSNVTKLQHLGTTILK-DREKXXXXXXXXXXRCNKITD-----LNGNLFRHLQK--SI 166
T + + +L L + K R + + K+ D L G +F L ++
Sbjct: 327 T-FVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTL 385
Query: 167 VKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQI 226
+ ++ + E + K N+I+ ++ + LQ+L L+ NKLQ
Sbjct: 386 ILSRNRISVIEQRTLQGLKNLLVLSLDF---NRISRMDQRSLVNCSQLQDLHLNDNKLQA 442
Query: 227 I-ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSL 285
+ E ++V + L+ L++ ++ + E L +L L M N++ +IR
Sbjct: 443 VPEALAHV----QLLKTLDVGENMISQIENTSIT---QLESLYGLRMTENSLTHIRRGVF 495
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
++SL +NL NK+ I N +L+ IRL N L+ I + F L L +
Sbjct: 496 DRMSSLQILNLSQNKLKSIEAGSLQRN--SQLQAIRLDGNQLKSI-AGLFTELPNLVWLN 552
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN-KLKDFNL 404
+S N L+ + + I L + ++ N L N +++ + + D +
Sbjct: 553 ISGNRLEKFDYSH-------IPIGLQWLDVR---ANRITQLGNYFEIESELSLSTFDASY 602
Query: 405 NVFSNITSKQTPMN---LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQ 460
N+ + IT+ P + L L++N I+ + + P + +DL NR+ + N L+
Sbjct: 603 NLLTEITASSIPNSVEVLYLNDNQISKIQPYTFFKKP-NLTRVDLVRNRLTTLEPNALR 660
Score = 134 (52.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+LYLD N + L + AF L++L L H+ I V+ RTF G+ L+++ L N++ L
Sbjct: 795 QLYLDGNNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKAL 854
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
G +F L+ L + HN + ++ F++ ++ L + +N
Sbjct: 855 NGNEFQGLDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHN 897
Score = 133 (51.9 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIH-----KRLKEIRLSNNYLELIESDTFYNLKE 340
Y T ++I ++ ++ NN H KRLK + L+++ +E++ + TFY L E
Sbjct: 781 YEQTLPSHIPMDSTQLYLDGNNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLE 840
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
L + L N LK++ F+ L+N+ + L N I I F +L +L L L N +
Sbjct: 841 LEVLQLQSNQLKALNGNEFQGLDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHNAIT 900
Query: 401 DF 402
F
Sbjct: 901 SF 902
Score = 110 (43.8 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
NN+ EL +S F K L + L+++ ++ + +F L + + L NQ+K + N F
Sbjct: 801 NNFREL-QSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEF 859
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
L NL +L LQ N + + F+++ + L L +N IT+ + P Y+
Sbjct: 860 QGLDNLQELYLQHNAIATIDTLTFTHLYHLKI---LRLDHNAITSFAVWNF--LPSYLNE 914
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
L L++N P F D LR Y++ +E
Sbjct: 915 LRLASN-----PWTCSCEFIDKLRD-YINRHE 940
Score = 103 (41.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 69/331 (20%), Positives = 132/331 (39%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQG-IFN--SKLRELEITGKDLK 57
M LDLS NK+S L A ++ + LQ L DQL G IF + L L ++ +
Sbjct: 335 MMLDLSANKISRLE-AHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRIS 393
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATL 116
I+ + L L + +I + + N Q+ L L+ NKL + A
Sbjct: 394 VIEQRTLQGLKNL--LVLSLDFNRISRMDQR---SLVNCSQLQDLHLNDNKLQAVPEALA 448
Query: 117 YSNVTKLQHLGTTILKDREKXXXXXXXXXXRC----NKITDLNGNLFRHLQKSIVKAKKN 172
+ + K +G ++ E N +T + +F + +
Sbjct: 449 HVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILNLSQ 508
Query: 173 NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKL-------- 224
N + ++ N++ + G LF L NL L++S N+L
Sbjct: 509 NKLKSIEAGSLQRNSQLQAIRLDG-NQLKSIAG-LFTELPNLVWLNISGNRLEKFDYSHI 566
Query: 225 ----QIIELNSN-VFDVFEKLQL-LEISFSLFNS--NEFPYYILNKNLNTLEWLAMDNNN 276
Q +++ +N + + ++ E+S S F++ N + N++E L +++N
Sbjct: 567 PIGLQWLDVRANRITQLGNYFEIESELSLSTFDASYNLLTEITASSIPNSVEVLYLNDNQ 626
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNN 307
I I+ Y+ + +L ++L N+++ + N
Sbjct: 627 ISKIQPYTFFKKPNLTRVDLVRNRLTTLEPN 657
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 268 (99.4 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 83/301 (27%), Positives = 145/301 (48%)
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
++ N I NI + + L L ++L+YN+I +H F + RL+E+ L NN L+ +
Sbjct: 65 SLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFE-KL-SRLEELYLGNNLLQAL 122
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
T L++L + + N + + SF+ L +++ + L N + + F L NL+
Sbjct: 123 APGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLL 182
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNN 449
L L+ N+++ N F+ + + LNLS N + + P+ + +L LS N
Sbjct: 183 YLHLEANRIRFLGKNAFTQLGKLRF---LNLSANELQPSLRHAATFVPLRSLSTLILSAN 239
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+Q + Q L L L N++ HL AF L+ L L LE N + +
Sbjct: 240 SLQHLGPRVFQHLP-RLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLE 298
Query: 510 GMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS-NTIIEKLDISY 568
+ +L+ +DLS NE+S L F +LR L++ N L +L D+F+ + + +LD+
Sbjct: 299 PLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDG 358
Query: 569 N 569
N
Sbjct: 359 N 359
Score = 182 (69.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 78/281 (27%), Positives = 133/281 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I L+ F L L+EL L N LQ + + L+ L I ++ N NE
Sbjct: 93 NQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGT-----LAPLRKLRILYA--NGNEIGR 145
Query: 258 YILN--KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L +L L +D N + + + L +L Y++LE N+I + N F + K
Sbjct: 146 LSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFT-QLGK 204
Query: 316 RLKEIRLSNNYLE--LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L+ + LS N L+ L + TF L+ L+T+ LS N L+ + F++L + + LS N
Sbjct: 205 -LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGN 263
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
Q+ ++ P AF L L +L L+ N+L L + + S + L+LS N ++ L+
Sbjct: 264 QLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEA---LDLSGNELSALHPAT 320
Query: 434 KKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
++ L L +N + + + + +L +L LD N
Sbjct: 321 FGHQG-RLRELSLRDNALSALSGDIFAA-SPALYRLDLDGN 359
Score = 152 (58.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 55/220 (25%), Positives = 97/220 (44%)
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+++ T +L N + +I F L + + L +NQI+ ++P F L L +L L +N
Sbjct: 59 QDVLTYSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNL 118
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNF 458
L+ + + + L + N I L + +K L L N + +P
Sbjct: 119 LQALAPGTLAPLRKLRI---LYANGNEIGRLSRGSFEGLESLVK-LRLDGNVLGALPDAV 174
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR--TFIGMPNLQI 516
+ L L+L+ N I+ L AF L L L+L N + ++ TF+ + +L
Sbjct: 175 FAPLGNLLY-LHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLST 233
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ LS N + L F +L +L++S N+L L + F
Sbjct: 234 LILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAF 273
Score = 139 (54.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 65/225 (28%), Positives = 101/225 (44%)
Query: 351 LKSI-KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L+++ KT+S + ++L L N I I F L L +LDLQ N+++ + F
Sbjct: 46 LRAVPKTSSLPSPQDVLTYSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEK 105
Query: 410 ITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRK 468
++ + L L NN + L AP+ ++ L + N I + + +SL K
Sbjct: 106 LSRLE---ELYLGNNLLQALAPGTL--APLRKLRILYANGNEIGRLSRGSFEGL-ESLVK 159
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI--SM 526
L LD N + L F L L L LE N I + K F + L+ ++LS NE+ S+
Sbjct: 160 LRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSL 219
Query: 527 LTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
F L L +S N L+ L VF + + L +S NQ
Sbjct: 220 RHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 165 (63.1 bits), Expect = 9.4e-20, Sum P(3) = 9.4e-20
Identities = 44/135 (32%), Positives = 72/135 (53%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ I LE N I I F + +++L+ I LSNN + I D F L+ LN++ L N
Sbjct: 310 TMTEIRLELNGIKSIPPGAF--SPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
+ + F L + ++L+ N+I I P+AF +L NL L L DNK++ F++
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 427
Query: 410 ITSKQTPMNLNLSNN 424
+ + QT L+L+ N
Sbjct: 428 LRAIQT---LHLAQN 439
Score = 157 (60.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 46/167 (27%), Positives = 82/167 (49%)
Query: 262 KNL--NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
KN+ NT E L ++ NNI I L L + L N+I + F + K L+
Sbjct: 57 KNIPRNT-ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAF--DDMKELER 113
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+RL+ N L+++ F N + L+ + LS N L+++ +F+ ++ N+ L N+I I
Sbjct: 114 LRLNRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIE 173
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
AF L L L L +N + ++ F+++ +T L +N++
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT---FRLHSNHL 217
Score = 155 (59.6 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 52/167 (31%), Positives = 80/167 (47%)
Query: 360 KNL-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPM 417
KN+ N + L+ N I I+ N F L L L L +N++ F ++ ++ +
Sbjct: 57 KNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRL 116
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
N N L++N+ QA + LDLS N +Q VP + D L+ L LD N I
Sbjct: 117 NRNQLQVLPELLFQNN--QA---LSRLDLSENFLQAVPRKAFRGATD-LKNLQLDKNRIS 170
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ AF L LE+L+L +NNI + +F MP L+ L N +
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 152 (58.6 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 89/343 (25%), Positives = 149/343 (43%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQ-LLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N++ I+E +F+KL L +I+ S +E + E L +
Sbjct: 544 ELRLNNNEISILEATG----LFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSE-LHLTA 598
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N +++IR+ L L + L N+IS IHN+ F + RL + L +N++ I
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRL--LSLYDNHITTISPGA 656
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLPNLVK-L 392
F L+ L+T+ NLL + F N N L+ + + + K + N P+ ++ +
Sbjct: 657 FDTLQALSTL----NLLAN----PF-NCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQI 707
Query: 393 DLQDNKLKDFNLNVFSN----ITSKQTPMNLNLSNNYI--TNLY-ENDKKQAPIYIKSLD 445
LQD DF + Q P + + +N + + K P + L
Sbjct: 708 PLQDVAFPDFRCEEGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELY 767
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L TF L+ + L N+I L ++F N+ L L L +N + +
Sbjct: 768 LDGNQFTLVPGQ-LSTFK-YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F G+ +L+++ L N++S L F L L I N L
Sbjct: 826 LAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 868
Score = 151 (58.2 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 44/142 (30%), Positives = 74/142 (52%)
Query: 290 SLNYINLEYNKISKIH-NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
S + L N+IS + LF H LK+I LSNN + IE TF ++ + L+
Sbjct: 541 STTELRLNNNEISILEATGLFKKLSH--LKKINLSNNKVSEIEDGTFEGAASVSELHLTA 598
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L+SI++ F+ L+ + ++L N+I I+ ++F L N+ L L DN + + F
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFD 658
Query: 409 NITSKQTPMNLNLSNNYITNLY 430
+ + T +NL L+N + N +
Sbjct: 659 TLQALST-LNL-LANPFNCNCH 678
Score = 139 (54.0 bits), Expect = 9.4e-20, Sum P(3) = 9.4e-20
Identities = 37/133 (27%), Positives = 70/133 (52%)
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
Q+ L L+NN I+ L + ++K ++LSNN++ E+ + A S+ +L+L
Sbjct: 540 QSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAA-SVSELHLTA 598
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+++ + + F LD L L L +N I+ + +F G+ N++++ L N I+ ++ F
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFD 658
Query: 534 FSFKLRILNISHN 546
L LN+ N
Sbjct: 659 TLQALSTLNLLAN 671
Score = 116 (45.9 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P + + L N I+ +P + LR++ L N+I + AF L L L L
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + + F G+ LQ++ L+ N+I+ + + F L +L++ N+++SL + F+
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Query: 558 NT-IIEKLDISYN 569
+ I+ L ++ N
Sbjct: 427 SLRAIQTLHLAQN 439
Score = 110 (43.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT ++ N F L L+ L L N++ +E + FD ++L+ L + N N+
Sbjct: 71 NNITRIHKNDFAGLKQLRVLQLMENQIGAVERGA--FDDMKELERLRL-----NRNQLQV 123
Query: 258 Y--ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+L +N L L + N ++ + + T L + L+ N+IS I F +
Sbjct: 124 LPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFR--ALR 181
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
L+ + L+NN + I +F ++ +L T L N L
Sbjct: 182 GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 102 (41.0 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 30/115 (26%), Positives = 59/115 (51%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIAV 502
++ S+ ++ ++P Q S +L L+ NEI L+AT F L L+ ++L +N ++
Sbjct: 524 VECSSLKLSKIPERIPQ----STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSE 579
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
+ TF G ++ + L+ N++ + F LR L + +NR+ + D F+
Sbjct: 580 IEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFT 634
Score = 100 (40.3 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
SN +Q +P + ++ +LYLD N+ L L+L+ L +N I+ +
Sbjct: 748 SNKHLQALP----KGIPKNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNS 802
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLD 565
+F M L + LS+N + + F LR+L++ N + +L +F++ T + L
Sbjct: 803 SFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLA 862
Query: 566 ISYN 569
I N
Sbjct: 863 IGAN 866
Score = 100 (40.3 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N+ + + EIRL N ++ I F ++L I LS N + I +F+ L ++ ++VL
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I + F L L L L NK+ + F ++ Q L+L +N I +L +
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDL---QNLSLLSLYDNKIQSLAK 422
Query: 432 NDKKQAPIYIKSLDLSNN 449
I++L L+ N
Sbjct: 423 GTFTSLRA-IQTLHLAQN 439
Score = 97 (39.2 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N IK+I + L I+L N+I++I + F + + L +
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQ-GL-RSLNSLV 363
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + I+ +F++L N+ + L N+I+ +
Sbjct: 364 LYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKG 423
Query: 382 AFVNLPNLVKLDLQDNK-LKDFNL 404
F +L + L L N + D NL
Sbjct: 424 TFTSLRAIQTLHLAQNPFICDCNL 447
Score = 89 (36.4 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 31/123 (25%), Positives = 54/123 (43%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLELL 493
++ P L L+NN I + L L+K+ L N++ + D T G V EL
Sbjct: 536 ERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSEL- 594
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + F G+ L+ + L N IS + + F +R+L++ N + ++
Sbjct: 595 HLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 654
Query: 554 DVF 556
F
Sbjct: 655 GAF 657
Score = 85 (35.0 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 25/106 (23%), Positives = 53/106 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ-GIFN--SKLRELEITGKDLKFI 59
L L++N++S+L L+ ++ L+ + + K +++ G F + + EL +T L+ I
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESI 604
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
F +D TL + N +I + + F + N+ ++L +H
Sbjct: 605 RSGMFRGLDGLR--TLMLRNNRISCIHNDSFTGLRNVRLLSLYDNH 648
Score = 83 (34.3 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+I+ L LF+ L +L++++LS NK+ E+ F+ + L ++ + S
Sbjct: 550 NEISILEATGLFKKLSHLKKINLSNNKVS--EIEDGTFEGAASVSELHLTANQLESIRSG 607
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + L+ L L + NN I I N S L ++ ++L N I+ I F
Sbjct: 608 MF---RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAF 657
Score = 76 (31.8 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS 252
NKITDL +F LY LQ L L+ NK+ I D F+ LQ L + SL+++
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRP-----DAFQDLQNLSL-LSLYDN 415
Score = 75 (31.5 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 31/136 (22%), Positives = 64/136 (47%)
Query: 214 LQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMD 273
+ E+ L N ++ I F + KL+ +++S + + P + L +L L +
Sbjct: 311 MTEIRLELNGIKSIP--PGAFSPYRKLRRIDLSNNQI-AEIAPDAF--QGLRSLNSLVLY 365
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
N I ++ L +L + L NKI+ I + F ++ + L + L +N ++ +
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQ-DL-QNLSLLSLYDNKIQSLAKG 423
Query: 334 TFYNLKELNTITLSYN 349
TF +L+ + T+ L+ N
Sbjct: 424 TFTSLRAIQTLHLAQN 439
Score = 70 (29.7 bits), Expect = 9.4e-20, Sum P(3) = 9.4e-20
Identities = 40/156 (25%), Positives = 67/156 (42%)
Query: 29 GTTI-LKGDQLQGIFNSKLRE---LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEE 84
GTT+ G LQ I + R LE+ G ++ I + F + L++ QI
Sbjct: 42 GTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLR--VLQLMENQIGA 99
Query: 85 LPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN--VTKLQHLGTTILK--DREKXXXX 140
+ G FD ++ +E+ L L+ N+L VL +N +++L L L+ R+
Sbjct: 100 VERGAFDDMKELER--LRLNRNQLQVLPELLFQNNQALSRLD-LSENFLQAVPRKAFRGA 156
Query: 141 XXXXXXRC--NKITDLNGNLFRHLQKSIVKAKKNNN 174
+ N+I+ + FR L+ V NNN
Sbjct: 157 TDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNN 192
Score = 69 (29.3 bits), Expect = 7.3e-16, Sum P(4) = 7.3e-16
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KLR ++++ + I P AF + + L L +I +LP G+F + + Q+ L L+
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY--GNKITDLPRGVFGGLYTL-QLLL-LN 389
Query: 105 HNKLSVL 111
NK++ +
Sbjct: 390 ANKINCI 396
Score = 67 (28.6 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 25/105 (23%), Positives = 44/105 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
NK++++ F S+ + N E S + R N+I+ ++ + F
Sbjct: 575 NKVSEIEDGTFEGAA-SVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSF 633
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
L N++ LSL N I ++ FD + L L + + FN N
Sbjct: 634 TGLRNVRLLSLYDN--HITTISPGAFDTLQALSTLNLLANPFNCN 676
Score = 66 (28.3 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 27/111 (24%), Positives = 55/111 (49%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+DLS+N+++ + L+ L + +L G+++ +G+F L+ L + +
Sbjct: 338 IDLSNNQIAEIAPDAFQG----LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKI 393
Query: 57 KFIDPSAFDNIDACYDLTL-KITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
I P AF ++ +L+L + + +I+ L G F + I+ TL L+ N
Sbjct: 394 NCIRPDAFQDLQ---NLSLLSLYDNKIQSLAKGTFTSLRAIQ--TLHLAQN 439
Score = 60 (26.2 bits), Expect = 5.8e-16, Sum P(4) = 5.8e-16
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
NKI + + F+ L NL LSL NK+Q L F +Q L ++ + F
Sbjct: 391 NKINCIRPDAFQDLQNLSLLSLYDNKIQ--SLAKGTFTSLRAIQTLHLAQNPF 441
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 267 (99.0 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 98/360 (27%), Positives = 162/360 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ ++ L L+ L+L N+L+ + S LQ L + + S
Sbjct: 45 NDLSFIHPKALSGLKELKVLTLQNNQLKTVP--SEAIRGLSALQSLRLDANHITSVPEDS 102
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L L +D+N++ + + L NL +L + L NKIS I + F N+ L
Sbjct: 103 F---EGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFT-NLSS-L 157
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + F L L T+ L+YN L + K L ++ ++ N I
Sbjct: 158 VVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISV 216
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF P L + L DN L + F N++ + L + + + N
Sbjct: 217 IPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS---LVIRGASMVQQFPN--LTG 271
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++++SL L+ +I + N Q LR L L +N IK D +F LE +SL+
Sbjct: 272 TVHLESLTLTGTKISSISSNLCQE-QKMLRTLDLSYNSIK--DLPSFDGCHALEEISLQR 328
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + + TF G+ +L+I+DLS N+I + F + L+IS N L S P + S
Sbjct: 329 NQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTSFPTEGLS 388
Score = 231 (86.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 85/332 (25%), Positives = 153/332 (46%)
Query: 248 SLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNN 307
S+ N + P KN LE L + N++ I +L L L + L+ N++ + +
Sbjct: 19 SMNNITQLPEDAF-KNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSE 77
Query: 308 LFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLN 367
+ L+ +RL N++ + D+F L +L + L N L + NL +
Sbjct: 78 AIR-GL-SALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQA 135
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT 427
+ L+ N+I I AF NL +LV L L +NK+K+ + F + + +T ++LN +N
Sbjct: 136 LTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLET-LDLNYNN---L 191
Query: 428 NLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNL 487
+ K P +K L +N I +P LR ++L N + + +AF NL
Sbjct: 192 GEFPQAIKALPS-LKELLFHSNSISVIPDGAFDG-NPLLRTIHLYDNPLSFVGNSAFHNL 249
Query: 488 DVLELLSLEHNNIAVVVK-RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
+L SL ++V + G +L+ + L+ +IS ++ LR L++S+N
Sbjct: 250 S--DLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYN 307
Query: 547 RLRSLPRDVFSNT-IIEKLDISYNQ-DKIRPG 576
++ LP F +E++ + NQ +I+ G
Sbjct: 308 SIKDLPS--FDGCHALEEISLQRNQIHQIKEG 337
Score = 212 (79.7 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 89/350 (25%), Positives = 154/350 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT + + F L L+ L L N L +E+ + LQ L ++ + +S P
Sbjct: 93 NHITSVPEDSFEGLAQLRHLWLDDNSL--MEVPVHPLSNLPTLQALTLALNKISS--IPD 148
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
Y NL++L L + NN IKN+ + L +L ++L YN + + + L
Sbjct: 149 YAFT-NLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLGEFPQAI---KALPSL 204
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
KE+ +N + +I F L TI L N L + ++F NL+++ ++V+ +
Sbjct: 205 KELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ 264
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQ 436
+PN +L L L K+ ++ SN+ +Q + L+LS N I +L D
Sbjct: 265 QFPN-LTGTVHLESLTLTGTKIS----SISSNLCQEQKMLRTLDLSYNSIKDLPSFDGCH 319
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
A ++ + L N+I ++ Q SLR L L N+I + AF L + L +
Sbjct: 320 A---LEEISLQRNQIHQIKEGTFQGLV-SLRILDLSRNQIHEIHNRAFAKLGSITNLDIS 375
Query: 497 HNNIAVVVKRTFIGMPNLQII-DLSFNEISMLTGEQFYFSFKLRILNISH 545
N + G+ L+++ +L E L + F LR L++ +
Sbjct: 376 FNELTSFPTEGLSGLNQLKLVGNLKLKEA--LAAKDFV---NLRSLSVPY 420
Score = 208 (78.3 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 84/317 (26%), Positives = 142/317 (44%)
Query: 264 LNTLEWLA-MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
LN+L L + NNI + + N L + L N +S IH + K LK + L
Sbjct: 9 LNSLPALRDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALS-GL-KELKVLTL 66
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
NN L+ + S+ L L ++ L N + S+ SF+ L + ++ L N + + +
Sbjct: 67 QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHP 126
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
NLP L L L NK+ F+N++S L+L NN I NL ++ ++
Sbjct: 127 LSNLPTLQALTLALNKISSIPDYAFTNLSSLVV---LHLHNNKIKNLGQHCFDGLD-NLE 182
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+LDL+ N + E P ++ SL++L N I + AF +L + L N ++
Sbjct: 183 TLDLNYNNLGEFP-QAIKALP-SLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSF 240
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQF---YFSFKLRILNISHNRLRSLPRDVFSNT 559
V F + +L L SM+ +QF + L L ++ ++ S+ ++
Sbjct: 241 VGNSAFHNLSDLH--SLVIRGASMV--QQFPNLTGTVHLESLTLTGTKISSISSNLCQEQ 296
Query: 560 -IIEKLDISYNQDKIRP 575
++ LD+SYN K P
Sbjct: 297 KMLRTLDLSYNSIKDLP 313
Score = 208 (78.3 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 85/354 (24%), Positives = 155/354 (43%)
Query: 235 DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYI 294
D F+ LE N F + L L+ L + NN +K + + ++ L++L +
Sbjct: 29 DAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSL 88
Query: 295 NLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
L+ N I+ + + F + +L+ + L +N L + NL L +TL+ N + SI
Sbjct: 89 RLDANHITSVPEDSFE-GL-AQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKISSI 146
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
+F NL++++ + L N+IK + + F L NL LDL N L +F + + + K+
Sbjct: 147 PDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKE 206
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS---NNRIQEVP---------VNFLQTF 462
+ N + ++ + I++ LS N+ + + +Q F
Sbjct: 207 LLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQF 266
Query: 463 AD-----SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
+ L L L +I + + +L L L +N+I + +F G L+ I
Sbjct: 267 PNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLP--SFDGCHALEEI 324
Query: 518 DLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYNQ 570
L N+I + F LRIL++S N++ + F+ I LDIS+N+
Sbjct: 325 SLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNE 378
Score = 161 (61.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 57/214 (26%), Positives = 98/214 (45%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+S N I + +AF N P L +L L N L + S + K+ + L L NN + +
Sbjct: 18 ISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGL--KELKV-LTLQNNQLKTV 74
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
++ + ++SL L N I VP + + A LR L+LD N + + NL
Sbjct: 75 -PSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQ-LRHLWLDDNSLMEVPVHPLSNLPT 132
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ L+L N I+ + F + +L ++ L N+I L F L L++++N L
Sbjct: 133 LQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLG 192
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIRP-GR-ESNP 581
P+ + + +++L N + P G + NP
Sbjct: 193 EFPQAIKALPSLKELLFHSNSISVIPDGAFDGNP 226
Score = 90 (36.7 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L EL + G DL FI P A + LTL+ N Q++ +PS + ++ + LD +H
Sbjct: 37 LEELRLAGNDLSFIHPKALSGLKELKVLTLQ--NNQLKTVPSEAIRGLSALQSLRLDANH 94
Query: 106 NKLSVLNMATLYSNVTKLQHL 126
SV + + + +L+HL
Sbjct: 95 IT-SVPEDS--FEGLAQLRHL 112
>UNIPROTKB|E2RGP5 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:22865 OMA:IAPYQTR
EMBL:AAEX03017345 RefSeq:XP_851171.1 Ensembl:ENSCAFT00000022943
GeneID:608925 KEGG:cfa:608925 NextBio:20894548 Uniprot:E2RGP5
Length = 979
Score = 166 (63.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 47/156 (30%), Positives = 82/156 (52%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N+++ + S +L + INL N + I + F N K LK + L N L++
Sbjct: 82 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQSGAF--NGLKILKRLYLHENKLDI 139
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+DTF L+ L + YN++K I++ +F+NL+ + ++L+ N I + N F + +L
Sbjct: 140 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAV-SL 198
Query: 390 VKLDLQDNKLKD-FNLNVFSNITSKQTPMNLNLSNN 424
LDL+ N+LK F + +I ++ M L L N
Sbjct: 199 THLDLRGNRLKVLFYRGMLDHIG--RSLMELQLEEN 232
Score = 155 (59.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ K L LS+N IQ++ + F+ SL L+L N I ++ AF NL L+ L L
Sbjct: 407 PLNAKKLYLSSNLIQKIYRSDFWNFS-SLDLLHLGNNRISYVQDGAFINLPNLKSLFLNG 465
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N+I + F G+ +L + FN I + F L++L +++N LR+LP D F+
Sbjct: 466 NDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFA 525
Query: 558 NTIIEKLDISYN 569
T + +L++ N
Sbjct: 526 GTSLARLNLRKN 537
Score = 142 (55.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
NNI + L N L Y L N I KI+ + F +N L + L NN + ++
Sbjct: 398 NNISELLPRPL-NAKKL-Y--LSSNLIQKIYRSDF-WNFSS-LDLLHLGNNRISYVQDGA 451
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F NL L ++ L+ N ++ + F+ L ++ + FN I+ I P AF +PNL L L
Sbjct: 452 FINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFL 511
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
+N L+ + F+ TS LNL NY L + I +DL+ N
Sbjct: 512 NNNLLRTLPTDAFAG-TSLA---RLNLRKNYFLYLPVAGVLEHLNAIVQIDLNEN 562
Score = 135 (52.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 36/139 (25%), Positives = 76/139 (54%)
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+L + LN + L + +N I+ I +N +SL+ ++L N+IS + + F N+ LK
Sbjct: 403 LLPRPLNAKK-LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAF-INL-PNLK 459
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ L+ N +E + F L+ L+ + +N+++ I+ +F + N+ + L+ N ++ +
Sbjct: 460 SLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTL 519
Query: 379 YPNAFVNLPNLVKLDLQDN 397
+AF +L +L+L+ N
Sbjct: 520 PTDAFAGT-SLARLNLRKN 537
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 34/131 (25%), Positives = 66/131 (50%)
Query: 444 LDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L L N ++++ N FL ++ + L N ++ + + AF L +L+ L L N + +
Sbjct: 82 LYLQRNSMRKLYTNSFLHL--NNAVSINLGNNALQDIQSGAFNGLKILKRLYLHENKLDI 139
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
TF+G+ +L+ + +N I + F KLR+L ++ N + LP ++F +
Sbjct: 140 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVSLT 199
Query: 563 KLDISYNQDKI 573
LD+ N+ K+
Sbjct: 200 HLDLRGNRLKV 210
Score = 116 (45.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 36/113 (31%), Positives = 54/113 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N + L N F HL N ++L N LQ I+ + N + ++L L E +F ++ F
Sbjct: 87 NSMRKLYTNSFLHLNNAVSINLGNNALQDIQSGAFNGLKILKRLYLHENKLDIFRNDTF- 145
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
L +LE+L D N IK I + + NL+ L + L N I + NLF
Sbjct: 146 -----LGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLF 193
Score = 54 (24.1 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 73 LTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT--TI 130
+++ + N ++++ SG F+ ++ +++ L L NKL + T + + L++L +
Sbjct: 104 VSINLGNNALQDIQSGAFNGLKILKR--LYLHENKLDIFRNDT-FLGLESLEYLQADYNV 160
Query: 131 LKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
+K E ++ LN NL L ++ KA
Sbjct: 161 IKRIESGAFRNLSKL----RVLILNDNLIPMLPTNLFKA 195
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 266 (98.7 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 96/355 (27%), Positives = 170/355 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ + G+ F LY+L+ L L N+L + ++ ++++ LQ L + +L + P
Sbjct: 98 NHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADA-LWEL-PSLQSLRLDANLISL--VPE 153
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L++L L +D+N + I +L NL +L + L N+IS I + F N+ L
Sbjct: 154 RSF-EGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQ-NLTS-L 210
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + + +F L L T+ L+YN L+ + + L + + N IK
Sbjct: 211 VVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPV-AIRTLGRLQELGFHNNNIKA 269
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF+ P L + DN ++ + F ++ T LS N T++ E +
Sbjct: 270 IPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPKLHT-----LSLNGATDIQEFPDLKG 324
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ L L+ I+ +P Q LR L L N+I+ L + LE + L+H
Sbjct: 325 TTSLEILTLTRAGIRLLPPGMCQQLP-RLRVLELSHNQIEELPS--LHRCQKLEEIGLQH 381
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
N I + TF + +L+ +DLS+N I + E F L L+++ N+L +LP
Sbjct: 382 NRIGAIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLSTLP 436
Score = 227 (85.0 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 103/375 (27%), Positives = 173/375 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T+L LF HL L+EL LS N L I + F L++L + + P
Sbjct: 74 NNLTELQPGLFHHLRFLEELRLSGNHLSHIP--GHAFSGLYSLKILMLQNNQLGG--VPA 129
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L + L +L+ L +D N I + S L+SL ++ L+ N +++I + N+ L
Sbjct: 130 DALWE-LPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALN-NL-PAL 186
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L+ N + I F NL L + L N ++ + T SF+ L+N+ + L++N+++
Sbjct: 187 QAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQE 246
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+P A L L +L +N +K F QT ++ +N I + + +
Sbjct: 247 -FPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQT---IHFYDNPIQCVGRSAFQDL 302
Query: 438 P-IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
P ++ SL+ + + IQE P + T SL L L I+ L L L +L L
Sbjct: 303 PKLHTLSLNGATD-IQEFP-DLKGT--TSLEILTLTRAGIRLLPPGMCQQLPRLRVLELS 358
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
HN I + + L+ I L N I + + F LR L++S N +RS+ + F
Sbjct: 359 HNQIEELP--SLHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALDLSWNAIRSIHPEAF 416
Query: 557 SNT-IIEKLDISYNQ 570
+ KLD++ NQ
Sbjct: 417 VTLRSLVKLDLTDNQ 431
Score = 225 (84.3 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 75/277 (27%), Positives = 131/277 (47%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKR-LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
Y++L N ++++ LFH H R L+E+RLS N+L I F L L + L N L
Sbjct: 68 YLDLSMNNLTELQPGLFH---HLRFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQL 124
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
+ + L ++ ++ L N I + +F L +L L L DN L + + +N+
Sbjct: 125 GGVPADALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLP 184
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
+ Q + L+ N I+++ + + + L L NNRIQ + + + +L L L
Sbjct: 185 ALQA---MTLALNRISHIPDYAFQNLTSLVV-LHLHNNRIQHLGTHSFEGL-HNLETLDL 239
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
++NE++ A L L+ L +NNI + ++ F+G P LQ I N I +
Sbjct: 240 NYNELQEFPV-AIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSA 298
Query: 532 FYFSFKLRILNISH-NRLRSLPRDVFSNTIIEKLDIS 567
F KL L+++ ++ P D+ T +E L ++
Sbjct: 299 FQDLPKLHTLSLNGATDIQEFP-DLKGTTSLEILTLT 334
Score = 217 (81.4 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 85/335 (25%), Positives = 162/335 (48%)
Query: 245 ISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI 304
+ S+ N E + + +L LE L + N++ +I ++ L SL + L+ N++ +
Sbjct: 69 LDLSMNNLTELQPGLFH-HLRFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGV 127
Query: 305 HNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNN 364
+ + + L+ +RL N + L+ +F L L + L N L I + NL
Sbjct: 128 PADAL-WELPS-LQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPA 185
Query: 365 MLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+ + L+ N+I +I AF NL +LV L L +N+++ + F + + +T L+L N
Sbjct: 186 LQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLET---LDL--N 240
Query: 425 YITNLYENDKKQAPIYIKSL----DLS--NNRIQEVPVN-FLQTFADSLRKLYLDFNEIK 477
Y N+ ++ P+ I++L +L NN I+ +P F+ L+ ++ N I+
Sbjct: 241 Y------NELQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGN--PLLQTIHFYDNPIQ 292
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKR--TFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
+ +AF +L L LSL N A ++ G +L+I+ L+ I +L
Sbjct: 293 CVGRSAFQDLPKLHTLSL---NGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGMCQQL 349
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+LR+L +SHN++ LP + +E++ + +N+
Sbjct: 350 PRLRVLELSHNQIEELP-SLHRCQKLEEIGLQHNR 383
Score = 188 (71.2 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 94/401 (23%), Positives = 178/401 (44%)
Query: 37 QLQ-GIFNSK--LRELEITGKDLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDK 92
+LQ G+F+ L EL ++G L I AF + Y L L + N Q+ +P+ +
Sbjct: 78 ELQPGLFHHLRFLEELRLSGNHLSHIPGHAFSGL---YSLKILMLQNNQLGGVPADALWE 134
Query: 93 IENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL-----GTTILKDRE-KXXXXXXXXXX 146
+ +++ + LD N +S++ + + ++ L+HL T + R
Sbjct: 135 LPSLQSLRLDA--NLISLVPERS-FEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTL 191
Query: 147 RCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGN 206
N+I+ + F++L S+V +NN + + + N++ +
Sbjct: 192 ALNRISHIPDYAFQNLT-SLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPVA 250
Query: 207 LFRHLYNLQELSLSFNKLQIIELNSNVFD-VFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
+ R L LQEL N ++ I + + + + + + + + F ++L
Sbjct: 251 I-RTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAF------QDLP 303
Query: 266 TLEWLAMDNNNIKNIRNY-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
L L++ N +I+ + L TSL + L I + + + RL+ + LS+
Sbjct: 304 KLHTLSL--NGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGMCQ-QL-PRLRVLELSH 359
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N +E E + + ++L I L +N + +I +F L+++ + LS+N I+ I+P AFV
Sbjct: 360 NQIE--ELPSLHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALDLSWNAIRSIHPEAFV 417
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
L +LVKLDL DN+L L + + NL LS +
Sbjct: 418 TLRSLVKLDLTDNQLSTLPLAGLGGLMHLKLRGNLALSQAF 458
Score = 173 (66.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 97/416 (23%), Positives = 174/416 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T+L LF HL + + + + + N+ + N++ + +
Sbjct: 74 NNLTELQPGLFHHL-RFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADAL 132
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
L +LQ L L N + ++ S F+ L+ L + + E P LN NL L+
Sbjct: 133 WELPSLQSLRLDANLISLVPERS--FEGLSSLRHLWLDDNALT--EIPVRALN-NLPALQ 187
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+ + N I +I +Y+ NLTSL ++L N+I + + F +H L+ + L+ N L+
Sbjct: 188 AMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFE-GLHN-LETLDLNYNELQ 245
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
L L + N +K+I +F + I N I+ + +AF +LP
Sbjct: 246 EFPV-AIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPK 304
Query: 389 LVKLDLQD-NKLKDF-------NLNVFSNITS--KQTPMNL--NLSNNYITNLYENDKKQ 436
L L L +++F +L + + + + P + L + L N ++
Sbjct: 305 LHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQIEE 364
Query: 437 APIY-----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
P ++ + L +NRI + + + SLR L L +N I+ + AF L L
Sbjct: 365 LPSLHRCQKLEEIGLQHNRIGAIGADTFSQLS-SLRALDLSWNAIRSIHPEAFVTLRSLV 423
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN-EISMLTGEQFYFSF-KLRILNISH 545
L L N ++ + G+ L + L N +S + SF KLRIL + +
Sbjct: 424 KLDLTDNQLSTL---PLAGLGGLMHLKLRGNLALSQAFSKD---SFPKLRILEVPY 473
Score = 165 (63.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
LS N + + P F +L L +L L N L + FS + S + M L NN + +
Sbjct: 71 LSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGHAFSGLYSLKILM---LQNNQLGGV 127
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
+ + P ++SL L N I VP + + SLR L+LD N + + A NL
Sbjct: 128 PADALWELPS-LQSLRLDANLISLVPERSFEGLS-SLRHLWLDDNALTEIPVRALNNLPA 185
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ ++L N I+ + F + +L ++ L N I L F L L++++N L+
Sbjct: 186 LQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQ 245
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIRPGRESNPRPI 584
P + + +++L N K P + P+
Sbjct: 246 EFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPL 280
Score = 48 (22.0 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
P D + A DL++ + EL GLF + +E++ L +H
Sbjct: 59 PRDLDPLTAYLDLSMN----NLTELQPGLFHHLRFLEELRLSGNH 99
>UNIPROTKB|F1N513 [details] [associations]
symbol:LOC527364 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:IAPYQTR EMBL:DAAA02002302
IPI:IPI00907843 RefSeq:XP_003585735.1 RefSeq:XP_003585736.1
Ensembl:ENSBTAT00000022827 GeneID:527364 KEGG:bta:527364
Uniprot:F1N513
Length = 980
Score = 165 (63.1 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 47/156 (30%), Positives = 81/156 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N+++ + S +L + INL N + I F N K LK + L N L++
Sbjct: 83 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAF--NGLKILKRLYLHENKLDI 140
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+DTF L+ L + YN++K I++ +F+NL+ + ++L+ N I + N F + +L
Sbjct: 141 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAV-SL 199
Query: 390 VKLDLQDNKLKD-FNLNVFSNITSKQTPMNLNLSNN 424
LDL+ N+LK F + +I ++ M L L N
Sbjct: 200 THLDLRGNRLKVLFYRGMLDHIG--RSLMELQLEEN 233
Score = 155 (59.6 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ K L LS+N IQ++ + F+ SL L+L N I ++ AF NL L+ L L
Sbjct: 408 PLNAKKLYLSSNLIQKIYRSDFWNFS-SLDLLHLGNNRISYVQDGAFINLPNLKSLFLNG 466
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N+I + F G+ +L + FN I + F L++L +++N LR+LP D F+
Sbjct: 467 NDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFA 526
Query: 558 NTIIEKLDISYN 569
T + +L++ N
Sbjct: 527 GTSLARLNLRKN 538
Score = 142 (55.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
NNI + L N L Y L N I KI+ + F +N L + L NN + ++
Sbjct: 399 NNISELLPRPL-NAKKL-Y--LSSNLIQKIYRSDF-WNFSS-LDLLHLGNNRISYVQDGA 452
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F NL L ++ L+ N ++ + F+ L ++ + FN I+ I P AF +PNL L L
Sbjct: 453 FINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFL 512
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
+N L+ + F+ TS LNL NY L + I +DL+ N
Sbjct: 513 NNNLLRTLPTDAFAG-TSLA---RLNLRKNYFLYLPVAGVLEHLNAIVQIDLNEN 563
Score = 135 (52.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 36/139 (25%), Positives = 76/139 (54%)
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+L + LN + L + +N I+ I +N +SL+ ++L N+IS + + F N+ LK
Sbjct: 404 LLPRPLNAKK-LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAF-INL-PNLK 460
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ L+ N +E + F L+ L+ + +N+++ I+ +F + N+ + L+ N ++ +
Sbjct: 461 SLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTL 520
Query: 379 YPNAFVNLPNLVKLDLQDN 397
+AF +L +L+L+ N
Sbjct: 521 PTDAFAGT-SLARLNLRKN 538
Score = 127 (49.8 bits), Expect = 0.00024, P = 0.00024
Identities = 34/131 (25%), Positives = 65/131 (49%)
Query: 444 LDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L L N ++++ N FL ++ + L N ++ + AF L +L+ L L N + +
Sbjct: 83 LYLQRNSMRKLYTNSFLHL--NNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDI 140
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
TF+G+ +L+ + +N I + F KLR+L ++ N + LP ++F +
Sbjct: 141 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVSLT 200
Query: 563 KLDISYNQDKI 573
LD+ N+ K+
Sbjct: 201 HLDLRGNRLKV 211
Score = 117 (46.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 36/113 (31%), Positives = 54/113 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N + L N F HL N ++L N LQ I+ + N + ++L L E +F ++ F
Sbjct: 88 NSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDIFRNDTF- 146
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
L +LE+L D N IK I + + NL+ L + L N I + NLF
Sbjct: 147 -----LGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLF 194
Score = 51 (23.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 20/99 (20%), Positives = 46/99 (46%)
Query: 73 LTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT--TI 130
+++ + N ++++ +G F+ ++ +++ L L NKL + T + + L++L +
Sbjct: 105 VSINLGNNALQDIQTGAFNGLKILKR--LYLHENKLDIFRNDT-FLGLESLEYLQADYNV 161
Query: 131 LKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
+K E ++ LN NL L ++ KA
Sbjct: 162 IKRIESGAFRNLSKL----RVLILNDNLIPMLPTNLFKA 196
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 267 (99.0 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 97/361 (26%), Positives = 165/361 (45%)
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYY-ILNKNLNTLEWLAMD 273
+ L+LS+NKL E++ F+ LQ E+ N+NE L + + L +
Sbjct: 71 RSLNLSYNKLS--EIDPAGFEDLPNLQ--EV---YLNNNELTAVPSLGAASSHVVSLFLQ 123
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
+N I+++ L SL ++L N I+++ N F +KE+ L+ N + +E
Sbjct: 124 HNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHG--PPIKELNLAGNRIGTLELG 181
Query: 334 TFYNL-KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
F L + L T+ LS N + + +FK L + + L+ N+I+ I F L +L L
Sbjct: 182 AFDGLSRSLLTLRLSKNRITQLPVRAFK-LPRLTQLDLNRNRIRLIEGLTFQGLNSLEVL 240
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ 452
LQ N + F ++ L+L N + + + + L LSNN I
Sbjct: 241 KLQRNNISKLTDGAFWGLSKMHV---LHLEYNSLVEV-NSGSLYGLTALHQLHLSNNSIA 296
Query: 453 EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP 512
+ +F L +L L FN + LD + L L +L L HN+I+ + + F G+
Sbjct: 297 RIHRKGW-SFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLR 355
Query: 513 NLQIIDLSFNEISML---TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISY 568
+L+++DL NEIS T F L L + N+++S+ + FS +E L++
Sbjct: 356 SLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGG 415
Query: 569 N 569
N
Sbjct: 416 N 416
Score = 257 (95.5 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 102/366 (27%), Positives = 168/366 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIE----LNSNVFDVFEKLQLLEISFSLFNSN 253
NK+++++ F L NLQE+ L+ N+L + +S+V +F LQ +I S+ S
Sbjct: 78 NKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSLGAASSHVVSLF--LQHNKIR-SVEGS- 133
Query: 254 EFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNI 313
+ Y+ +LE L + NNI +RN + + +NL N+I + F +
Sbjct: 134 QLKAYL------SLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFD-GL 186
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
+ L +RLS N + + F L L + L+ N ++ I+ +F+ LN++ + L N
Sbjct: 187 SRSLLTLRLSKNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRN 245
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
I + AF L + L L+ N L + N +T+ L+LSNN I ++
Sbjct: 246 NISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALH---QLHLSNNSIARIHRKG 302
Query: 434 KKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELL 493
+ L LS N + + L + SL L L N I H+ AF L L +L
Sbjct: 303 WSFCQ-KLHELVLSFNNLTRLDEESLAELS-SLSVLRLSHNSISHIAEGAFKGLRSLRVL 360
Query: 494 SLEHNNIAVVVKRT---FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
L+HN I+ ++ T F G+ +L + L N+I + F L LN+ N +RS
Sbjct: 361 DLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRS 420
Query: 551 LPRDVF 556
+ D F
Sbjct: 421 VQFDAF 426
Score = 219 (82.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 97/377 (25%), Positives = 167/377 (44%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
NK+++++ F L ++ NNN V + NKI + G+
Sbjct: 78 NKLSEIDPAGFEDLPN--LQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVEGSQL 135
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYI-LNKNLNTL 267
+ +L+ L LS N I E+ + F ++ L ++ + + E + L+++L TL
Sbjct: 136 KAYLSLEVLDLSLNN--ITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTL 193
Query: 268 EWLAMDNNNIKN--IRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
+ N I +R + L LT L+ L N+I I F ++ L+ ++L N
Sbjct: 194 R---LSKNRITQLPVRAFKLPRLTQLD---LNRNRIRLIEGLTFQ-GLNS-LEVLKLQRN 245
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
+ + F+ L +++ + L YN L + + S L + + LS N I I+ +
Sbjct: 246 NISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSF 305
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLD 445
L +L L N L + + ++S L LS+N I+++ E K ++ LD
Sbjct: 306 CQKLHELVLSFNNLTRLDEESLAELSSLSV---LRLSHNSISHIAEGAFKGLRS-LRVLD 361
Query: 446 LSNNRIQEVPVNFLQTFA--DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L +N I + F+ DSL KL L N+IK + AF L+ LE L+L N I V
Sbjct: 362 LDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRSV 421
Query: 504 VKRTFIGMPNLQIIDLS 520
F+ M NL+ + +S
Sbjct: 422 QFDAFVKMKNLKELHIS 438
Score = 187 (70.9 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 90/380 (23%), Positives = 159/380 (41%)
Query: 38 LQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
L G S R L ++ L IDP+ F+++ ++ L N ++ +PS L ++
Sbjct: 62 LPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLN--NNELTAVPS-LGAASSHV- 117
Query: 98 QMTLDLSHNKLSVLNMATL--YSNVTKLQHLGTTILKDREKXXXXX---XXXXXRCNKIT 152
++L L HNK+ + + L Y ++ L I + R N+I
Sbjct: 118 -VSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIG 176
Query: 153 DLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLY 212
L F L +S++ + + N Q+ R N+I + G F+ L
Sbjct: 177 TLELGAFDGLSRSLLTLRLSKNRIT-QLPVRAFKLPRLTQLDLNRNRIRLIEGLTFQGLN 235
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISF-SLFNSNEFPYYILNKNLNTLEWLA 271
+L+ L L N + +L F K+ +L + + SL N Y L L L
Sbjct: 236 SLEVLKLQRNNIS--KLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLY----GLTALHQLH 289
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI-HNNLFHFNIHKRLKEIRLSNNYLELI 330
+ NN+I I L+ + L +N ++++ +L + L +RLS+N + I
Sbjct: 290 LSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELS---SLSVLRLSHNSISHI 346
Query: 331 ESDTFYNLKELNTITLSYNLLK-SIKTTS--FKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
F L+ L + L +N + +I+ TS F L+++ + L N+IK + AF L
Sbjct: 347 AEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLE 406
Query: 388 NLVKLDLQDNKLKDFNLNVF 407
L L+L N ++ + F
Sbjct: 407 GLEHLNLGGNAIRSVQFDAF 426
Score = 156 (60.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 61/212 (28%), Positives = 98/212 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISF-SLFNSNEFP 256
N I+ L F L + L L +N L +E+NS L L +S S+ +
Sbjct: 245 NNISKLTDGAFWGLSKMHVLHLEYNSL--VEVNSGSLYGLTALHQLHLSNNSIARIHRKG 302
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ K L L + NN+ + SL L+SL+ + L +N IS I F + +
Sbjct: 303 WSFCQK----LHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFK-GL-RS 356
Query: 317 LKEIRLSNNYLE-LIE--SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L+ + L +N + IE S F L L+ +TL N +KS+ +F L + ++ L N
Sbjct: 357 LRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGN 416
Query: 374 QIKYIYPNAFVNLPNLVKLDLQ-DNKLKDFNL 404
I+ + +AFV + NL +L + D+ L D L
Sbjct: 417 AIRSVQFDAFVKMKNLKELHISSDSFLCDCQL 448
Score = 154 (59.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 83/380 (21%), Positives = 167/380 (43%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ--HLGTTILKGDQLQGIFNSKLRELEITGKDLKFI 59
+L+LS+NKLS ++ A + ++ LQ +L L G +S + L + ++ +
Sbjct: 72 SLNLSYNKLSEIDPAG-FEDLPNLQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSV 130
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
+ S + L L + N I E+ + F I++ L+L+ N++ L + +
Sbjct: 131 EGSQLKAYLSLEVLDLSLNN--ITEVRNTCFPHGPPIKE--LNLAGNRIGTLELGA-FDG 185
Query: 120 VTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQK------SIVKAKKNN 173
+++ L + K+R R ++ DLN N R ++ + ++ K
Sbjct: 186 LSR-SLLTLRLSKNRITQLPVRAFKLPRLTQL-DLNRNRIRLIEGLTFQGLNSLEVLKLQ 243
Query: 174 NNNEDQVSDREK-XXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232
NN +++D N + ++N L L +L LS N I ++
Sbjct: 244 RNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNS--IARIHRK 301
Query: 233 VFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN 292
+ +KL L +SF+ N L + L++L L + +N+I +I + L SL
Sbjct: 302 GWSFCQKLHELVLSFN--NLTRLDEESLAE-LSSLSVLRLSHNSISHIAEGAFKGLRSLR 358
Query: 293 YINLEYNKIS-KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
++L++N+IS I + F+ L ++ L N ++ + F L+ L + L N +
Sbjct: 359 VLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAI 418
Query: 352 KSIKTTSFKNLNNMLNIVLS 371
+S++ +F + N+ + +S
Sbjct: 419 RSVQFDAFVKMKNLKELHIS 438
Score = 126 (49.4 bits), Expect = 0.00036, P = 0.00036
Identities = 36/137 (26%), Positives = 70/137 (51%)
Query: 438 PIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
P + +SL+LS N++ E+ P F +L+++YL+ NE+ + + + V+ L L+
Sbjct: 67 PSWTRSLNLSYNKLSEIDPAGFEDL--PNLQEVYLNNNELTAVPSLGAASSHVVSLF-LQ 123
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
HN I V +L+++DLS N I+ + F ++ LN++ NR+ +L F
Sbjct: 124 HNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAF 183
Query: 557 SNTIIEKLDISYNQDKI 573
L + ++++I
Sbjct: 184 DGLSRSLLTLRLSKNRI 200
Score = 126 (49.4 bits), Expect = 0.00036, P = 0.00036
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
+LNLS N ++ + + P ++ + L+NN + VP L + + L+L N+I+
Sbjct: 72 SLNLSYNKLSEIDPAGFEDLP-NLQEVYLNNNELTAVPS--LGAASSHVVSLFLQHNKIR 128
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY-FSF 536
++ + LE+L L NNI V F P ++ ++L+ N I L F S
Sbjct: 129 SVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSR 188
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPG 576
L L +S NR+ LP F + +LD++ N+ ++ G
Sbjct: 189 SLLTLRLSKNRITQLPVRAFKLPRLTQLDLNRNRIRLIEG 228
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 264 (98.0 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 103/374 (27%), Positives = 178/374 (47%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
L LS N L EL +F L+ L +S + + + P + L++L+ L + +N
Sbjct: 71 LDLSMNNLT--ELQPGLFHHLRFLEELRLSGN--HLSHIPGQAFS-GLHSLKILMLQSNQ 125
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
++ I +L+ L SL + L+ N IS + F + L+ + L +N L I
Sbjct: 126 LRGIPAEALWELPSLQSLRLDANLISLVPERSFE-GLSS-LRHLWLDDNALTEIPVRALN 183
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
NL L +TL+ N ++ I +F+NL +++ + L N+I+++ ++F L NL LDL
Sbjct: 184 NLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNY 243
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
N+L++F L + + Q L NN I + E +P+ ++++ +N IQ V
Sbjct: 244 NELQEFPLAI-RTLGRLQ---ELGFHNNNIKAIPEKAFMGSPL-LQTIHFYDNPIQFVGR 298
Query: 457 NFLQTFADSLRKLYL----DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP 512
+ Q + L L L D E L T LE+L+L I ++ +P
Sbjct: 299 SAFQ-YLSKLHTLSLNGATDIQEFPDLKGTTS-----LEILTLTRAGIRLLPPGVCQQLP 352
Query: 513 NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYNQD 571
L+I++LS N+I L + KL + + HNR++ + D FS ++ LD+S+N
Sbjct: 353 RLRILELSHNQIEELPS--LHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNAI 410
Query: 572 K-IRPGRESNPRPI 584
+ I P S R +
Sbjct: 411 RAIHPEAFSTLRSL 424
Score = 251 (93.4 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 96/355 (27%), Positives = 166/355 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ + G F L++L+ L L N+L+ I + ++++ LQ L + +L + P
Sbjct: 100 NHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEA-LWEL-PSLQSLRLDANLISL--VPE 155
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L++L L +D+N + I +L NL +L + L N I I + F N+ L
Sbjct: 156 RSF-EGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQ-NLTS-L 212
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + + +F L L T+ L+YN L+ + + L + + N IK
Sbjct: 213 VVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPL-AIRTLGRLQELGFHNNNIKA 271
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF+ P L + DN ++ + F ++ T LS N T++ E +
Sbjct: 272 IPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSKLHT-----LSLNGATDIQEFPDLKG 326
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ L L+ I+ +P Q LR L L N+I+ L + LE + L H
Sbjct: 327 TTSLEILTLTRAGIRLLPPGVCQQLP-RLRILELSHNQIEELPS--LHRCQKLEEIGLRH 383
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
N I + TF + +LQ +DLS+N I + E F L L+++ N+L +LP
Sbjct: 384 NRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLP 438
Score = 246 (91.7 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 77/277 (27%), Positives = 133/277 (48%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKR-LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
Y++L N ++++ LFH H R L+E+RLS N+L I F L L + L N L
Sbjct: 70 YLDLSMNNLTELQPGLFH---HLRFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQL 126
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
+ I + L ++ ++ L N I + +F L +L L L DN L + + +N+
Sbjct: 127 RGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLP 186
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
+ Q + L+ N+I ++ + + + L L NNRIQ V + + +L L L
Sbjct: 187 ALQA---MTLALNHIRHIPDYAFQNLTSLVV-LHLHNNRIQHVGTHSFEGL-HNLETLDL 241
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
++NE++ A L L+ L +NNI + ++ F+G P LQ I N I +
Sbjct: 242 NYNELQEFPL-AIRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSA 300
Query: 532 FYFSFKLRILNISH-NRLRSLPRDVFSNTIIEKLDIS 567
F + KL L+++ ++ P D+ T +E L ++
Sbjct: 301 FQYLSKLHTLSLNGATDIQEFP-DLKGTTSLEILTLT 336
Score = 185 (70.2 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 101/417 (24%), Positives = 176/417 (42%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T+L LF HL + + + + + N+ + N++ +
Sbjct: 76 NNLTELQPGLFHHL-RFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEAL 134
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
L +LQ L L N + ++ S F+ L+ L + + E P LN NL L+
Sbjct: 135 WELPSLQSLRLDANLISLVPERS--FEGLSSLRHLWLDDNALT--EIPVRALN-NLPALQ 189
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+ + N+I++I +Y+ NLTSL ++L N+I + + F +H L+ + L NY E
Sbjct: 190 AMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFE-GLHN-LETLDL--NYNE 245
Query: 329 LIESD-TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
L E L L + N +K+I +F + I N I+++ +AF L
Sbjct: 246 LQEFPLAIRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLS 305
Query: 388 NLVKLDLQD-NKLKDF-NLNVFSNI---TSKQTPMNL-------NLSNNYITNLYENDKK 435
L L L +++F +L +++ T + + L L I L N +
Sbjct: 306 KLHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQIE 365
Query: 436 QAPIY-----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
+ P ++ + L +NRI+E+ + SL+ L L +N I+ + AF L L
Sbjct: 366 ELPSLHRCQKLEEIGLRHNRIKEIGADTFSQLG-SLQALDLSWNAIRAIHPEAFSTLRSL 424
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN-EISMLTGEQFYFSF-KLRILNISH 545
L L N + + G+ L + L N +S + SF KLRIL + +
Sbjct: 425 VKLDLTDNQLTTL---PLAGLGGLMHLKLKGNLALSQAFSKD---SFPKLRILEVPY 475
Score = 50 (22.7 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
P+ D + A DL++ + EL GLF + +E++ L +H
Sbjct: 61 PADLDPLTAYLDLSMN----NLTELQPGLFHHLRFLEELRLSGNH 101
>UNIPROTKB|B3KTY4 [details] [associations]
symbol:SLITRK2 "cDNA FLJ38959 fis, clone NT2RI2000167,
highly similar to SLIT and NTRK-like protein 2" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL109653 IPI:IPI00410358
RefSeq:NP_001137478.1 RefSeq:NP_001137480.1 RefSeq:NP_001137481.1
RefSeq:NP_001137482.1 RefSeq:NP_115928.1 UniGene:Hs.320368
GeneID:84631 KEGG:hsa:84631 CTD:84631 HGNC:HGNC:13449
PharmGKB:PA134968225 ChiTaRS:SLITRK2 GenomeRNAi:84631 NextBio:74551
OrthoDB:EOG4GTKC9 EMBL:AK096278 EMBL:CH471175 SMR:B3KTY4
STRING:B3KTY4 Ensembl:ENST00000335565 Uniprot:B3KTY4
Length = 724
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 45/163 (27%), Positives = 84/163 (51%)
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
K+ +N+N N T + Q IY L L+ N + + N +++++ L+L
Sbjct: 38 KENVLNINCENKGFTTVSLLQPPQYRIY--QLFLNGNLLTRLYPNEFVNYSNAVT-LHLG 94
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++ + AF L L+ L L +N + ++ + TF+G+ +L+ + +N IS + F
Sbjct: 95 NNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYISAIEAGAF 154
Query: 533 YFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
KL++L ++ N L SLP +VF ++ LD+ N+ K+ P
Sbjct: 155 SKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMP 197
Score = 172 (65.6 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 50/158 (31%), Positives = 79/158 (50%)
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
S +N+N TN+ +D + P K L L+ N +Q V N L ++ SL L+L
Sbjct: 350 SSDNGLNVNCQERKFTNI--SDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS-SLDLLHL 406
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N I + AF NL L L L N + V+ F G+ +LQ + L +N I +
Sbjct: 407 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLT 466
Query: 532 FYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N LRSLP ++F T + +L++ N
Sbjct: 467 FDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNN 504
Score = 147 (56.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 289 TSLNYINLEYNKISKIH-NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
TS + L N + ++ N+L ++ L + L NN + +I+ F NL L + L+
Sbjct: 375 TSPKKLYLTGNYLQTVYKNDLLEYS---SLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLN 431
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N L+ + + F L ++ + L +N IK I P F L NL L L +N L+ N+F
Sbjct: 432 GNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIF 491
Query: 408 SNITSKQTPMNLNLSNNYITNL-YENDKKQAPIYIKSLDLSNN 449
+ LNL NN+ ++L + Q P +I+ +DL N
Sbjct: 492 GGTALTR----LNLRNNHFSHLPVKGVLDQLPAFIQ-IDLQEN 529
Score = 144 (55.7 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L ++ N + + N ++ ++L N + +I F + K LK + L+NN LE+
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFS-GL-KTLKRLHLNNNKLEI 124
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + YN + +I+ +F LN + ++L+ N + + N F L
Sbjct: 125 LREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVF-RFVLL 183
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 184 THLDLRGNRLK 194
Score = 118 (46.6 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 36/146 (24%), Positives = 74/146 (50%)
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
NEF Y N TL + NN ++ IR + L +L ++L NK+ + + F
Sbjct: 80 NEFVNY---SNAVTLH---LGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTF-LG 132
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ L+ ++ NY+ IE+ F L +L + L+ NLL S+ + F+ + + ++ L
Sbjct: 133 LES-LEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRG 190
Query: 373 NQIKYI-YPNAFVNLPNLVKLDLQDN 397
N++K + + ++ ++++ L++N
Sbjct: 191 NRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 111 (44.1 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L N +++++ N F N + + L NN L+ I + F LK L + L+ N L+ ++
Sbjct: 69 LNGNLLTRLYPNEF-VN-YSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILR 126
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+F L ++ + +N I I AF L L L L DN L NVF
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVF 178
Score = 111 (44.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 46/159 (28%), Positives = 78/159 (49%)
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT 427
+ L+ N ++ +Y N + +L L L +N++ F+N+TS + L L+ NY+
Sbjct: 380 LYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLR---RLYLNGNYLE 436
Query: 428 NLYEN--DKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAF 484
LY + D Q+ Y L L N I+E+ P+ F +L+ L+L+ N ++ L F
Sbjct: 437 VLYPSMFDGLQSLQY---LYLEYNVIKEIKPLTFDALI--NLQLLFLNNNLLRSLPDNIF 491
Query: 485 GNLDVLELLSLEHNNIA-VVVKRTFIGMPNLQIIDLSFN 522
G L L+L +N+ + + VK +P IDL N
Sbjct: 492 GGT-ALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQEN 529
Score = 81 (33.6 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 203 LNGNLFRHLY--------NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
LNGNL LY N L L N LQ E+ + F + L+ L + N+N+
Sbjct: 69 LNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQ--EIRTGAFSGLKTLKRLHL-----NNNK 121
Query: 255 FPYYILNKN----LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH 310
IL ++ L +LE+L D N I I + L L + L N + + +N+F
Sbjct: 122 LE--ILREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
Query: 311 FNIHKRLKEIRLSNNYLELI 330
F + L + L N L+++
Sbjct: 180 FVL---LTHLDLRGNRLKVM 196
Score = 79 (32.9 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + ++ F L L+ L L+ NKL+I L + F E L+ L+ ++ ++ E
Sbjct: 96 NGLQEIRTGAFSGLKTLKRLHLNNNKLEI--LREDTFLGLESLEYLQADYNYISAIEAGA 153
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN--KISKIHNNLFHFNIHK 315
+ LN L+ L +++N + ++ + +++ L +++L N K+ L H
Sbjct: 154 F---SKLNKLKVLILNDNLLLSLPS-NVFRFVLLTHLDLRGNRLKVMPFAGVLEHIG--- 206
Query: 316 RLKEIRLSNN 325
+ EI+L N
Sbjct: 207 GIMEIQLEEN 216
Score = 78 (32.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
++ +L + G L + P+ F N +TL + N ++E+ +G F ++ +++ L L+
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNA--VTLHLGNNGLQEIRTGAFSGLKTLKR--LHLN 118
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNK--ITDLNGNLFRHL 162
+NKL +L T + + L++L D + NK + LN NL L
Sbjct: 119 NNKLEILREDT-FLGLESLEYLQA----DYNYISAIEAGAFSKLNKLKVLILNDNLLLSL 173
Query: 163 QKSIVK 168
++ +
Sbjct: 174 PSNVFR 179
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 259 (96.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 88/332 (26%), Positives = 162/332 (48%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
R N + L G +F L +++ L++ + L IE N+ + + L L++S + +
Sbjct: 89 RHNNLPKLQGFVFLAL-DIRHLTIHNSSLAAIEENA-LSSLGAGLTQLDVSLNQMKT--V 144
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
P L ++L L L +++N I I N + L +L + L NKI++I F +
Sbjct: 145 PSQAL-QHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFR-GLED 202
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+K + L N L I L L + + N +++I F+ L ++ +++L+ N I
Sbjct: 203 HIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMI 262
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ N F +L L L+L+ NK+ + + F + ++ L L +N I + +
Sbjct: 263 TTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGL--EENLQYLRLGDNQIHTIPSEALR 320
Query: 436 QAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
P++ ++ LDL NN I + + F DSL L L N+IK L + F NL+ LE L+
Sbjct: 321 --PLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLN 378
Query: 495 LEHNNIAVVVKRTFIGM-PNLQIIDLSFNEIS 525
L++N + + + + L+IID++ N ++
Sbjct: 379 LQNNKLQRIPQDIMEPVIDTLRIIDITDNPLN 410
Score = 249 (92.7 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 78/305 (25%), Positives = 149/305 (48%)
Query: 270 LAMDNNNIKNIRNYSLYNL-TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L + N+++ I +L +L L +++ N++ + + H L + L++N +
Sbjct: 109 LTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFH--LLILNLNHNKIT 166
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLN-IVLSFNQIKYIYPNAFVNLP 387
+I ++ F L+ L +TL N + I +F+ L + + + L N + I A L
Sbjct: 167 VIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILS 226
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
L KL++Q+NK++ + F + S + L L++N IT + N + + SL+L
Sbjct: 227 TLKKLEIQENKIRTISEGDFEGLQSLDS---LILAHNMITTVPANVFSHLTL-LNSLELE 282
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
N+I + + + ++L+ L L N+I + + A L L L L +NNI V+ +
Sbjct: 283 GNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDA 342
Query: 508 FIGM-PNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI--IEKL 564
F G +L ++L N+I +L F L LN+ +N+L+ +P+D+ I + +
Sbjct: 343 FTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPVIDTLRII 402
Query: 565 DISYN 569
DI+ N
Sbjct: 403 DITDN 407
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 102/439 (23%), Positives = 180/439 (41%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNI 67
N L +L T +++TK +GT LKG IF KLR +L + F +
Sbjct: 55 NGLDILCETTDLAHITK--SMGT--LKGKS-PIIFYLKLRH-----NNLPKLQGFVFLAL 104
Query: 68 DACYDLTLKITNTQIEELPSGLFDKI-ENIEQMTLDLSHNKLSVLNMATL----YSNVTK 122
D + L I N+ + + + + Q LD+S N++ + L + +
Sbjct: 105 DIRH---LTIHNSSLAAIEENALSSLGAGLTQ--LDVSLNQMKTVPSQALQHLFHLLILN 159
Query: 123 LQHLGTTILKDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVS 181
L H T++ + + NKIT ++ FR L+ I + N+ +
Sbjct: 160 LNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQ 219
Query: 182 DREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQ 241
+ NKI ++ F L +L L L+ N + + +NVF L
Sbjct: 220 KALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVP--ANVFSHLTLLN 277
Query: 242 LLEIS---FSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEY 298
LE+ S+ + + F L +NL ++L + +N I I + +L L L +++L
Sbjct: 278 SLELEGNKISVIDKDAFKG--LEENL---QYLRLGDNQIHTIPSEALRPLHRLRHLDLRN 332
Query: 299 NKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS 358
N I+ + + F L + L N ++++ S F NL L T+ L N L+ I
Sbjct: 333 NNINVLAEDAFT-GFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDI 391
Query: 359 FKNLNNMLNIV-LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPM 417
+ + + L I+ ++ N + N L KL L+D K KD ++ K+ P+
Sbjct: 392 MEPVIDTLRIIDITDNPL-----NCSCELTWFPKL-LEDLKNKD------DEMSQKKKPL 439
Query: 418 -NLNLSNN-YITNLYENDK 434
+++L N Y +K
Sbjct: 440 CHMSLDNREYFVQAMPTEK 458
Score = 146 (56.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 40/136 (29%), Positives = 72/136 (52%)
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
I+ L + N+ + + N L + L +L + N++K + + A +L L +L+L HN I
Sbjct: 106 IRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKI 165
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY-FSFKLRILNISHNRLRSLPRDVFSN- 558
V+ F G+ L+I+ L N+I+ + E F ++ LN+ N L ++P+ S
Sbjct: 166 TVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSIL 225
Query: 559 TIIEKLDISYNQDKIR 574
+ ++KL+I N KIR
Sbjct: 226 STLKKLEIQEN--KIR 239
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 49/224 (21%), Positives = 113/224 (50%)
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
++ KS+ T K+ + + L N + + F+ L ++ L + ++ L N S
Sbjct: 68 HITKSMGTLKGKS-PIIFYLKLRHNNLPKLQGFVFLAL-DIRHLTIHNSSLAAIEENALS 125
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
++ + T ++++L N + + + Q ++ L+L++N+I + N + ++L
Sbjct: 126 SLGAGLTQLDVSL--NQMKTV-PSQALQHLFHLLILNLNHNKITVIHNNAFEGL-ETLEI 181
Query: 469 LYLDFNEIKHLDATAFGNL-DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L L N+I +D AF L D ++ L+L N++ + ++ + L+ +++ N+I +
Sbjct: 182 LTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTI 241
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQ 570
+ F L L ++HN + ++P +VFS+ T++ L++ N+
Sbjct: 242 SEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNK 285
>UNIPROTKB|O94933 [details] [associations]
symbol:SLITRK3 "SLIT and NTRK-like protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 GO:GO:0016021 EMBL:CH471052 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AB020655 EMBL:AK290024 EMBL:BC114621
IPI:IPI00016467 RefSeq:NP_055741.2 UniGene:Hs.101745
ProteinModelPortal:O94933 SMR:O94933 STRING:O94933
PhosphoSite:O94933 PRIDE:O94933 Ensembl:ENST00000241274
Ensembl:ENST00000475390 GeneID:22865 KEGG:hsa:22865 UCSC:uc003fej.4
CTD:22865 GeneCards:GC03M164904 H-InvDB:HIX0003827 HGNC:HGNC:23501
HPA:HPA017636 MIM:609679 neXtProt:NX_O94933 PharmGKB:PA134958002
eggNOG:NOG292495 InParanoid:O94933 OMA:IAPYQTR OrthoDB:EOG473PQR
PhylomeDB:O94933 GenomeRNAi:22865 NextBio:43383 ArrayExpress:O94933
Bgee:O94933 CleanEx:HS_SLITRK3 Genevestigator:O94933
GermOnline:ENSG00000121871 Uniprot:O94933
Length = 977
Score = 164 (62.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 47/156 (30%), Positives = 81/156 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N+++ + S +L + INL N + I F N K LK + L N L++
Sbjct: 82 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAF--NGLKILKRLYLHENKLDV 139
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+DTF L+ L + YN++K I++ +F+NL+ + ++L+ N I + N F + +L
Sbjct: 140 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAV-SL 198
Query: 390 VKLDLQDNKLKD-FNLNVFSNITSKQTPMNLNLSNN 424
LDL+ N+LK F + +I ++ M L L N
Sbjct: 199 THLDLRGNRLKVLFYRGMLDHIG--RSLMELQLEEN 232
Score = 155 (59.6 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ K L LS+N IQ++ + F+ SL L+L N I ++ AF NL L+ L L
Sbjct: 407 PLNAKKLYLSSNLIQKIYRSDFWNFS-SLDLLHLGNNRISYVQDGAFINLPNLKSLFLNG 465
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N+I + F G+ +L + FN I + F L++L +++N LR+LP D F+
Sbjct: 466 NDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFA 525
Query: 558 NTIIEKLDISYN 569
T + +L++ N
Sbjct: 526 GTSLARLNLRKN 537
Score = 142 (55.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
NNI + L N L Y L N I KI+ + F +N L + L NN + ++
Sbjct: 398 NNISELLPRPL-NAKKL-Y--LSSNLIQKIYRSDF-WNFSS-LDLLHLGNNRISYVQDGA 451
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F NL L ++ L+ N ++ + F+ L ++ + FN I+ I P AF +PNL L L
Sbjct: 452 FINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFL 511
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
+N L+ + F+ TS LNL NY L + I +DL+ N
Sbjct: 512 NNNLLRTLPTDAFAG-TSLA---RLNLRKNYFLYLPVAGVLEHLNAIVQIDLNEN 562
Score = 135 (52.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 36/139 (25%), Positives = 76/139 (54%)
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+L + LN + L + +N I+ I +N +SL+ ++L N+IS + + F N+ LK
Sbjct: 403 LLPRPLNAKK-LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAF-INL-PNLK 459
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ L+ N +E + F L+ L+ + +N+++ I+ +F + N+ + L+ N ++ +
Sbjct: 460 SLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTL 519
Query: 379 YPNAFVNLPNLVKLDLQDN 397
+AF +L +L+L+ N
Sbjct: 520 PTDAFAGT-SLARLNLRKN 537
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 444 LDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L L N ++++ N FL ++ + L N ++ + AF L +L+ L L N + V
Sbjct: 82 LYLQRNSMRKLYTNSFLHL--NNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDV 139
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
TF+G+ +L+ + +N I + F KLR+L ++ N + LP ++F +
Sbjct: 140 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVSLT 199
Query: 563 KLDISYNQDKI 573
LD+ N+ K+
Sbjct: 200 HLDLRGNRLKV 210
Score = 116 (45.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 36/113 (31%), Positives = 54/113 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N + L N F HL N ++L N LQ I+ + N + ++L L E +F ++ F
Sbjct: 87 NSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTF- 145
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
L +LE+L D N IK I + + NL+ L + L N I + NLF
Sbjct: 146 -----LGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLF 193
Score = 52 (23.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 73 LTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT--TI 130
+++ + N ++++ +G F+ ++ +++ L L NKL V T + + L++L +
Sbjct: 104 VSINLGNNALQDIQTGAFNGLKILKR--LYLHENKLDVFRNDT-FLGLESLEYLQADYNV 160
Query: 131 LKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
+K E ++ LN NL L ++ KA
Sbjct: 161 IKRIESGAFRNLSKL----RVLILNDNLIPMLPTNLFKA 195
>RGD|1310506 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] RGD:1310506 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 EMBL:CH473976 GeneTree:ENSGT00680000099775 CTD:22865
OMA:IAPYQTR OrthoDB:EOG473PQR IPI:IPI00202395 RefSeq:NP_001101153.1
UniGene:Rn.68333 Ensembl:ENSRNOT00000013009 GeneID:310519
KEGG:rno:310519 UCSC:RGD:1310506 NextBio:662093 Uniprot:D4A062
Length = 979
Score = 164 (62.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 47/156 (30%), Positives = 81/156 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N+++ + S +L + INL N + I F N K LK + L N L++
Sbjct: 82 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAF--NGLKILKRLYLHENKLDV 139
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+DTF L+ L + YN++K I++ +F+NL+ + ++L+ N I + N F + +L
Sbjct: 140 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLFKAV-SL 198
Query: 390 VKLDLQDNKLKD-FNLNVFSNITSKQTPMNLNLSNN 424
LDL+ N+LK F + +I ++ M L L N
Sbjct: 199 THLDLRGNRLKVLFYRGMLDHIG--RSLMELQLEEN 232
Score = 155 (59.6 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ K L LS+N IQ++ + F+ SL L+L N I ++ AF NL L+ L L
Sbjct: 407 PLNAKKLYLSSNLIQKIYRSDFWNFS-SLDLLHLGNNRISYVQDGAFINLPNLKSLFLNG 465
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N+I + F G+ +L + FN I + F L++L +++N LR+LP D F+
Sbjct: 466 NDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFA 525
Query: 558 NTIIEKLDISYN 569
T + +L++ N
Sbjct: 526 GTSLARLNLRKN 537
Score = 142 (55.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
NNI + L N L Y L N I KI+ + F +N L + L NN + ++
Sbjct: 398 NNISELLPRPL-NAKKL-Y--LSSNLIQKIYRSDF-WNFSS-LDLLHLGNNRISYVQDGA 451
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F NL L ++ L+ N ++ + F+ L ++ + FN I+ I P AF +PNL L L
Sbjct: 452 FINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFL 511
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
+N L+ + F+ TS LNL NY L + I +DL+ N
Sbjct: 512 NNNLLRTLPTDAFAG-TSLA---RLNLRKNYFLYLPVAGVLEHLNAIVQIDLNEN 562
Score = 135 (52.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 36/139 (25%), Positives = 76/139 (54%)
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+L + LN + L + +N I+ I +N +SL+ ++L N+IS + + F N+ LK
Sbjct: 403 LLPRPLNAKK-LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAF-INL-PNLK 459
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ L+ N +E + F L+ L+ + +N+++ I+ +F + N+ + L+ N ++ +
Sbjct: 460 SLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTL 519
Query: 379 YPNAFVNLPNLVKLDLQDN 397
+AF +L +L+L+ N
Sbjct: 520 PTDAFAGT-SLARLNLRKN 537
Score = 127 (49.8 bits), Expect = 0.00024, P = 0.00024
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 444 LDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L L N ++++ N FL ++ + L N ++ + AF L +L+ L L N + V
Sbjct: 82 LYLQRNSMRKLYTNSFLHL--NNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDV 139
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
TF+G+ +L+ + +N I + F KLR+L ++ N + LP ++F +
Sbjct: 140 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLFKAVSLT 199
Query: 563 KLDISYNQDKI 573
LD+ N+ K+
Sbjct: 200 HLDLRGNRLKV 210
Score = 115 (45.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 36/113 (31%), Positives = 54/113 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N + L N F HL N ++L N LQ I+ + N + ++L L E +F ++ F
Sbjct: 87 NSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTF- 145
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
L +LE+L D N IK I + + NL+ L + L N I + NLF
Sbjct: 146 -----LGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLF 193
Score = 51 (23.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 73 LTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT--TI 130
+++ + N ++++ +G F+ ++ +++ L L NKL V T + + L++L +
Sbjct: 104 VSINLGNNALQDIQTGAFNGLKILKR--LYLHENKLDVFRNDT-FLGLESLEYLQADYNV 160
Query: 131 LKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
+K E ++ LN NL L ++ KA
Sbjct: 161 IKRIESGAFRNLSKL----RVLILNDNLIPVLPTNLFKA 195
>MGI|MGI:2679447 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] MGI:MGI:2679447 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 EMBL:CH466547 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 CTD:22865
eggNOG:NOG292495 OMA:IAPYQTR OrthoDB:EOG473PQR EMBL:AB097572
EMBL:AK158856 EMBL:BC066059 IPI:IPI00329845 RefSeq:NP_942564.2
UniGene:Mm.331076 ProteinModelPortal:Q810B9 SMR:Q810B9
PhosphoSite:Q810B9 PaxDb:Q810B9 PRIDE:Q810B9
Ensembl:ENSMUST00000059407 GeneID:386750 KEGG:mmu:386750
InParanoid:Q6NZM5 NextBio:405558 Bgee:Q810B9 CleanEx:MM_SLITRK3
Genevestigator:Q810B9 GermOnline:ENSMUSG00000048304 Uniprot:Q810B9
Length = 980
Score = 164 (62.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 47/156 (30%), Positives = 81/156 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N+++ + S +L + INL N + I F N K LK + L N L++
Sbjct: 83 LYLQRNSMRRLYTNSFLHLNNAVSINLGNNALQDIQTGAF--NGLKILKRLYLHENKLDV 140
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+DTF L+ L + YN++K I++ +F+NL+ + ++L+ N I + N F + +L
Sbjct: 141 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLFKAV-SL 199
Query: 390 VKLDLQDNKLKD-FNLNVFSNITSKQTPMNLNLSNN 424
LDL+ N+LK F + +I ++ M L L N
Sbjct: 200 THLDLRGNRLKVLFYRGMLDHIG--RSLMELQLEEN 233
Score = 155 (59.6 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ K L LS+N IQ++ + F+ SL L+L N I ++ AF NL L+ L L
Sbjct: 408 PLNAKKLYLSSNLIQKIYRSDFWNFS-SLDLLHLGNNRISYVQDGAFINLPNLKSLFLNG 466
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N+I + F G+ +L + FN I + F L++L +++N LR+LP D F+
Sbjct: 467 NDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFA 526
Query: 558 NTIIEKLDISYN 569
T + +L++ N
Sbjct: 527 GTSLARLNLRKN 538
Score = 142 (55.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
NNI + L N L Y L N I KI+ + F +N L + L NN + ++
Sbjct: 399 NNISELLPRPL-NAKKL-Y--LSSNLIQKIYRSDF-WNFSS-LDLLHLGNNRISYVQDGA 452
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F NL L ++ L+ N ++ + F+ L ++ + FN I+ I P AF +PNL L L
Sbjct: 453 FINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFL 512
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
+N L+ + F+ TS LNL NY L + I +DL+ N
Sbjct: 513 NNNLLRTLPTDAFAG-TSLA---RLNLRKNYFLYLPVAGVLEHLNAIVQIDLNEN 563
Score = 135 (52.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 36/139 (25%), Positives = 76/139 (54%)
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+L + LN + L + +N I+ I +N +SL+ ++L N+IS + + F N+ LK
Sbjct: 404 LLPRPLNAKK-LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAF-INL-PNLK 460
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ L+ N +E + F L+ L+ + +N+++ I+ +F + N+ + L+ N ++ +
Sbjct: 461 SLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTL 520
Query: 379 YPNAFVNLPNLVKLDLQDN 397
+AF +L +L+L+ N
Sbjct: 521 PTDAFAGT-SLARLNLRKN 538
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 35/131 (26%), Positives = 64/131 (48%)
Query: 444 LDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L L N ++ + N FL ++ + L N ++ + AF L +L+ L L N + V
Sbjct: 83 LYLQRNSMRRLYTNSFLHL--NNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDV 140
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
TF+G+ +L+ + +N I + F KLR+L ++ N + LP ++F +
Sbjct: 141 FRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLFKAVSLT 200
Query: 563 KLDISYNQDKI 573
LD+ N+ K+
Sbjct: 201 HLDLRGNRLKV 211
Score = 114 (45.2 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 36/113 (31%), Positives = 54/113 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N + L N F HL N ++L N LQ I+ + N + ++L L E +F ++ F
Sbjct: 88 NSMRRLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTF- 146
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
L +LE+L D N IK I + + NL+ L + L N I + NLF
Sbjct: 147 -----LGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLF 194
Score = 51 (23.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 73 LTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT--TI 130
+++ + N ++++ +G F+ ++ +++ L L NKL V T + + L++L +
Sbjct: 105 VSINLGNNALQDIQTGAFNGLKILKR--LYLHENKLDVFRNDT-FLGLESLEYLQADYNV 161
Query: 131 LKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
+K E ++ LN NL L ++ KA
Sbjct: 162 IKRIESGAFRNLSKL----RVLILNDNLIPVLPTNLFKA 196
>UNIPROTKB|F1NZH1 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099859 OMA:YFELKAN
EMBL:AADN02029493 EMBL:AADN02029494 EMBL:AADN02029495
IPI:IPI00573056 Ensembl:ENSGALT00000027325 Uniprot:F1NZH1
Length = 826
Score = 163 (62.4 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 44/139 (31%), Positives = 76/139 (54%)
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+D P K L L+ N IQ + + L +A SL L+L N I+ L+ AF NL L+
Sbjct: 354 SDLGPPPTNPKKLILAGNIIQTLLKSDLMDYA-SLEMLHLGNNRIEILEEGAFMNLTRLQ 412
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N++ + + F+G+ +L+ + L +N I + F KL++L +++N L++L
Sbjct: 413 KLYLNGNHLTKLSQNLFLGLQHLEYLYLEYNAIKEVLPGTFNTMPKLKVLYLNNNLLQTL 472
Query: 552 PRDVFSNTIIEKLDISYNQ 570
P +FS + +L++ NQ
Sbjct: 473 PPHIFSGVPLARLNLKTNQ 491
Score = 161 (61.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 37/132 (28%), Positives = 72/132 (54%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L+L NN + + VN +++ L+L FN I ++ AF L++L+ L + HN++ ++
Sbjct: 68 LNLLNNGLTMLHVNDFAGLVNAI-SLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEIL 126
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
+ TF G+ NL+ + N I+++ F +L++L ++ N + LP ++F +
Sbjct: 127 KEDTFDGLENLEFLQADNNFITVIEASAFSKLSRLKVLILNDNAIEYLPPNIFRFVPLTH 186
Query: 564 LDISYNQDKIRP 575
LD+ NQ + P
Sbjct: 187 LDLRGNQLQTLP 198
Score = 154 (59.3 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 37/128 (28%), Positives = 71/128 (55%)
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH-FNIHKRLKEIRLSNNYLELIES 332
NN + + L + ++L +N I+ I F+ N+ LK++ +++N LE+++
Sbjct: 72 NNGLTMLHVNDFAGLVNAISLHLGFNNIADIEPGAFNGLNL---LKQLHINHNSLEILKE 128
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
DTF L+ L + N + I+ ++F L+ + ++L+ N I+Y+ PN F +P L L
Sbjct: 129 DTFDGLENLEFLQADNNFITVIEASAFSKLSRLKVLILNDNAIEYLPPNIFRFVP-LTHL 187
Query: 393 DLQDNKLK 400
DL+ N+L+
Sbjct: 188 DLRGNQLQ 195
Score = 144 (55.7 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + L NN +E++E F NL L + L+ N L + F L ++ + L +N IK
Sbjct: 387 LEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLTKLSQNLFLGLQHLEYLYLEYNAIK 446
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPM-NLNLSNNYITNLYENDKK 435
+ P F +P L L L +N L+ ++FS + P+ LNL N ++L ++
Sbjct: 447 EVLPGTFNTMPKLKVLYLNNNLLQTLPPHIFSGV-----PLARLNLKTNQFSHLPVSNVL 501
Query: 436 QAPIYIKSLDLSNN 449
+ ++L NN
Sbjct: 502 DELDMLVQIELENN 515
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 47/157 (29%), Positives = 76/157 (48%)
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
P +LNL NN +T L+ ND I SL L N I ++ + L++L+++ N
Sbjct: 65 PFHLNLLNNGLTMLHVNDFAGLVNAI-SLHLGFNNIADIEPGAFNGL-NLLKQLHINHNS 122
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
++ L F L+ LE L ++N I V+ F + L+++ L+ N I L F F
Sbjct: 123 LEILKEDTFDGLENLEFLQADNNFITVIEASAFSKLSRLKVLILNDNAIEYLPPNIFRF- 181
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572
L L++ N+L++LP F I LD+ +K
Sbjct: 182 VPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 218
Score = 136 (52.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 38/155 (24%), Positives = 77/155 (49%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N I+ + L + SL ++L N+I + F N+ RL+++ L+ N+L
Sbjct: 366 LILAGNIIQTLLKSDLMDYASLEMLHLGNNRIEILEEGAF-MNL-TRLQKLYLNGNHLTK 423
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ + F L+ L + L YN +K + +F + + + L+ N ++ + P+ F +P L
Sbjct: 424 LSQNLFLGLQHLEYLYLEYNAIKEVLPGTFNTMPKLKVLYLNNNLLQTLPPHIFSGVP-L 482
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+L+L+ N+ +L V + + + + L NN
Sbjct: 483 ARLNLKTNQFS--HLPVSNVLDELDMLVQIELENN 515
Score = 126 (49.4 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 37/133 (27%), Positives = 68/133 (51%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
+LE L + NN I+ + + NLT L + L N ++K+ NLF H L+ + L N
Sbjct: 386 SLEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLTKLSQNLFLGLQH--LEYLYLEYN 443
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFV 384
++ + TF + +L + L+ NLL+++ F + + + L NQ ++ N
Sbjct: 444 AIKEVLPGTFNTMPKLKVLYLNNNLLQTLPPHIFSGVP-LARLNLKTNQFSHLPVSNVLD 502
Query: 385 NLPNLVKLDLQDN 397
L LV+++L++N
Sbjct: 503 ELDMLVQIELENN 515
Score = 113 (44.8 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 38/158 (24%), Positives = 77/158 (48%)
Query: 318 KEIRLSNNYLE-LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
K++ L+ N ++ L++SD + L + L N ++ ++ +F NL + + L+ N +
Sbjct: 364 KKLILAGNIIQTLLKSDLM-DYASLEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLT 422
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ N F+ L +L L L+ N +K+ F+ + + L L+NN + L +
Sbjct: 423 KLSQNLFLGLQHLEYLYLEYNAIKEVLPGTFNTMPKLKV---LYLNNNLLQTLPPHIFSG 479
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
P+ L+L N+ +PV+ + D L ++ L+ N
Sbjct: 480 VPL--ARLNLKTNQFSHLPVSNVLDELDMLVQIELENN 515
Score = 107 (42.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 40/162 (24%), Positives = 76/162 (46%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N ++L L+ N +Q + L S++ D + L++L + + E ++ NL L+ L +
Sbjct: 362 NPKKLILAGNIIQTL-LKSDLMD-YASLEMLHLGNNRIEILEEGAFM---NLTRLQKLYL 416
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+ N++ + L L Y+ LEYN I ++ F N +LK + L+NN L+ +
Sbjct: 417 NGNHLTKLSQNLFLGLQHLEYLYLEYNAIKEVLPGTF--NTMPKLKVLYLNNNLLQTLPP 474
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVLSFN 373
F + L + L N + ++ L+ ++ I L N
Sbjct: 475 HIFSGVP-LARLNLKTNQFSHLPVSNVLDELDMLVQIELENN 515
Score = 100 (40.3 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 37/138 (26%), Positives = 64/138 (46%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++NL N ++ +H N F ++ + L N + IE F L L + +++N L+
Sbjct: 67 HLNLLNNGLTMLHVNDFAGLVNAI--SLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLE 124
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
+K +F L N+ + N I I +AF L L L L DN ++ N+F +
Sbjct: 125 ILKEDTFDGLENLEFLQADNNFITVIEASAFSKLSRLKVLILNDNAIEYLPPNIFRFV-- 182
Query: 413 KQTPM-NLNLSNNYITNL 429
P+ +L+L N + L
Sbjct: 183 ---PLTHLDLRGNQLQTL 197
Score = 97 (39.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 38/134 (28%), Positives = 58/134 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N +T L+ N F L N L L FN + IE + N ++ ++L + S + + F
Sbjct: 73 NGLTMLHVNDFAGLVNAISLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEILKEDTFD 132
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L LE+L DNN I I + L+ L + L N I + N+F F
Sbjct: 133 ------GLENLEFLQADNNFITVIEASAFSKLSRLKVLILNDNAIEYLPPNIFRF---VP 183
Query: 317 LKEIRLSNNYLELI 330
L + L N L+ +
Sbjct: 184 LTHLDLRGNQLQTL 197
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 36/138 (26%), Positives = 66/138 (47%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N ++L+ N I+ + + ++ +L L L +N+++ F N+T Q L L+
Sbjct: 362 NPKKLILAGNIIQTLLKSDLMDYASLEMLHLGNNRIEILEEGAFMNLTRLQ---KLYLNG 418
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N++T L +N +++ L L N I+EV T L+ LYL+ N ++ L
Sbjct: 419 NHLTKLSQNLFLGLQ-HLEYLYLEYNAIKEVLPGTFNTMP-KLKVLYLNNNLLQTLPPHI 476
Query: 484 FGNLDVLELLSLEHNNIA 501
F + L L+L+ N +
Sbjct: 477 FSGVP-LARLNLKTNQFS 493
Score = 84 (34.6 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 29/105 (27%), Positives = 55/105 (52%)
Query: 29 GTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSG 88
G T+L + G+ N+ L + ++ I+P AF+ ++ L I + +E L
Sbjct: 74 GLTMLHVNDFAGLVNAI--SLHLGFNNIADIEPGAFNGLNLLKQL--HINHNSLEILKED 129
Query: 89 LFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKD 133
FD +EN+E + D +N ++V+ A+ +S +++L+ L IL D
Sbjct: 130 TFDGLENLEFLQAD--NNFITVIE-ASAFSKLSRLKVL---ILND 168
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 264 (98.0 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 98/358 (27%), Positives = 170/358 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T + F LY+L+ L L N L+ ++ + LQ L + + +S P
Sbjct: 100 NALTYIPKGAFAGLYSLKVLMLQNNHLR--QVPTEALQNLRSLQSLRLDANRISS--VPP 155
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L++L L +D+N + I + +L++L + L NKI I + F N+ L
Sbjct: 156 SCFS-GLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFG-NLSS-L 212
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN + + F L L T+ L+YN L T + + L+N+ + N IK
Sbjct: 213 VVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AVRTLSNLKELGFHSNNIKS 271
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AFV P+L+ + DN ++ + F ++ +T + LN ++ IT E
Sbjct: 272 IPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRT-LTLNGASQ-IT---EFPDLTG 326
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY---LDFNEIKHLDATAFGNLDVLELLS 494
++SL L+ +I +P QT D L L L +N ++ D +F L+ +
Sbjct: 327 TASLESLTLTGAQISSLP----QTVCDQLPNLQVLDLSYNLLE--DLPSFSVCQKLQKID 380
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L HN I + TF + +L+ ++L++N+I+++ F LR L++S NRL S+P
Sbjct: 381 LRHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNAFSTLPSLRKLDLSSNRLSSIP 438
Score = 240 (89.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 95/328 (28%), Positives = 156/328 (47%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L +L+ L + NN+++ + +L NL SL + L+ N+IS + + F +H L+ + L
Sbjct: 113 LYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPPSCFS-GLHS-LRHLWLD 170
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
+N L I F +L L +TL+ N + I +F NL++++ + L N+I + F
Sbjct: 171 DNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCF 230
Query: 384 VNLPNLVKLDLQDNKLKDFNLNV--FSNITS--------KQTPMNLNLSN-NYIT-NLYE 431
L +L LDL N L +F V SN+ K P + N + IT + Y+
Sbjct: 231 DGLHSLETLDLNYNNLDEFPTAVRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYD 290
Query: 432 NDKK-------QAPIYIKSLDLSN-NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N + Q +++L L+ ++I E P T SL L L +I L T
Sbjct: 291 NPIQLVGRSAFQHLPELRTLTLNGASQITEFPD---LTGTASLESLTLTGAQISSLPQTV 347
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNI 543
L L++L L +N + + +F LQ IDL NEI + + F F LR LN+
Sbjct: 348 CDQLPNLQVLDLSYNLLEDLP--SFSVCQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNL 405
Query: 544 SHNRLRSLPRDVFSNT-IIEKLDISYNQ 570
+ N++ + + FS + KLD+S N+
Sbjct: 406 AWNKIAIIDPNAFSTLPSLRKLDLSSNR 433
Score = 226 (84.6 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 89/333 (26%), Positives = 159/333 (47%)
Query: 242 LLEISFSLFNSNEFPYYILNKNLNTL-EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
LL + S +E P NL+ +L + NNI + L++L L + L N
Sbjct: 47 LLRVDCSDLGLSELP-----SNLSVFTSYLDLSMNNISQLPPSPLHSLRFLEELRLAGNA 101
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
++ I F ++ LK + L NN+L + ++ NL+ L ++ L N + S+ + F
Sbjct: 102 LTYIPKGAFA-GLYS-LKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPPSCFS 159
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
L+++ ++ L N + I AF +L L + L NK+ F N++S L+
Sbjct: 160 GLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVV---LH 216
Query: 421 LSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
L NN I +L K ++ +++LDL+ N + E P ++T ++ L++L N IK +
Sbjct: 217 LHNNRIHSL--GKKCFDGLHSLETLDLNYNNLDEFPTA-VRTLSN-LKELGFHSNNIKSI 272
Query: 480 DATAF-GNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG-EQFYFSFK 537
AF GN ++ + + N I +V + F +P L+ + L N S +T +
Sbjct: 273 PEKAFVGNPSLITIHFYD-NPIQLVGRSAFQHLPELRTLTL--NGASQITEFPDLTGTAS 329
Query: 538 LRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
L L ++ ++ SLP+ V ++ LD+SYN
Sbjct: 330 LESLTLTGAQISSLPQTVCDQLPNLQVLDLSYN 362
Score = 198 (74.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 87/327 (26%), Positives = 148/327 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T++ FR L LQ ++L+ NK+ I F L +L + + +S
Sbjct: 172 NALTEIPVQAFRSLSALQAMTLALNKIHHIP--DYAFGNLSSLVVLHLHNNRIHSLGKKC 229
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L++LE L ++ NN+ ++ L++L + N I I F N L
Sbjct: 230 F---DGLHSLETLDLNYNNLDEFPT-AVRTLSNLKELGFHSNNIKSIPEKAFVGN--PSL 283
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN---NMLNIVLSFNQ 374
I +N ++L+ F +L EL T+TL+ + + T F +L ++ ++ L+ Q
Sbjct: 284 ITIHFYDNPIQLVGRSAFQHLPELRTLTLN----GASQITEFPDLTGTASLESLTLTGAQ 339
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
I + LPNL LDL N L+D L FS Q ++L +N I + + D
Sbjct: 340 ISSLPQTVCDQLPNLQVLDLSYNLLED--LPSFSVCQKLQ---KIDLRHNEIYEI-QADT 393
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
Q ++SL+L+ N+I + N T SLRKL L N + + T L L+L
Sbjct: 394 FQQLFSLRSLNLAWNKIAIIDPNAFSTLP-SLRKLDLSSNRLSSIPVTGLHGLTHLKLTG 452
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSF 521
H +++ F P L++I++ +
Sbjct: 453 -NHALQSLISSENF---PELKVIEMPY 475
Score = 197 (74.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 89/355 (25%), Positives = 163/355 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + + ++L +LQ L L N++ + + F L+ L + + E P
Sbjct: 124 NHLRQVPTEALQNLRSLQSLRLDANRISSVP--PSCFSGLHSLRHLWLDDNALT--EIPV 179
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++L+ L+ + + N I +I +Y+ NL+SL ++L N+I + F +H L
Sbjct: 180 QAF-RSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFD-GLHS-L 236
Query: 318 KEIRLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ + L+ N L+ + T NLKEL N +KSI +F +++ I N I
Sbjct: 237 ETLDLNYNNLDEFPTAVRTLSNLKELG---FHSNNIKSIPEKAFVGNPSLITIHFYDNPI 293
Query: 376 KYIYPNAFVNLPNLVKLDLQD-NKLKDF-NLNVFSNITS--------KQTPMNL--NLSN 423
+ + +AF +LP L L L +++ +F +L +++ S P + L N
Sbjct: 294 QLVGRSAFQHLPELRTLTLNGASQITEFPDLTGTASLESLTLTGAQISSLPQTVCDQLPN 353
Query: 424 NYITNLYENDKKQAPIY-----IKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIK 477
+ +L N + P + ++ +DL +N I E+ + F Q F SLR L L +N+I
Sbjct: 354 LQVLDLSYNLLEDLPSFSVCQKLQKIDLRHNEIYEIQADTFQQLF--SLRSLNLAWNKIA 411
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
+D AF L L L L N ++ + G+ +L++ + S+++ E F
Sbjct: 412 IIDPNAFSTLPSLRKLDLSSNRLSSIPVTGLHGLTHLKLTGNHALQ-SLISSENF 465
Score = 174 (66.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 90/374 (24%), Positives = 154/374 (41%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
L EL + G L +I AF + Y L L + N + ++P+ + +++ + LD
Sbjct: 92 LEELRLAGNALTYIPKGAFAGL---YSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDA- 147
Query: 105 HNKLSVLNMATLYSNVTKLQHLG------TTILKDREKXXXXXXXXXXRCNKITDLNGNL 158
N++S + + +S + L+HL T I + NKI +
Sbjct: 148 -NRISSVP-PSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYA 205
Query: 159 FRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELS 218
F +L S+V +NN N + + R L NL+EL
Sbjct: 206 FGNLS-SLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFP-TAVRTLSNLKELG 263
Query: 219 LSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIK 278
N ++ I + V + L+ I F N + ++L L L + N
Sbjct: 264 FHSNNIKSIPEKAFVGNP----SLITIHF-YDNPIQLVGRSAFQHLPELRTLTL--NGAS 316
Query: 279 NIRNY-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
I + L SL + L +IS + + + L+ + LS N LE + S F
Sbjct: 317 QITEFPDLTGTASLESLTLTGAQISSLPQTVC--DQLPNLQVLDLSYNLLEDLPS--FSV 372
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
++L I L +N + I+ +F+ L ++ ++ L++N+I I PNAF LP+L KLDL N
Sbjct: 373 CQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNAFSTLPSLRKLDLSSN 432
Query: 398 KLKDFNLNVFSNIT 411
+L + +T
Sbjct: 433 RLSSIPVTGLHGLT 446
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 92/409 (22%), Positives = 167/409 (40%)
Query: 3 LDLSHNKLSVLNMATLYSN--VTKLQHLG---TTILKGDQLQGIFNSKLRELEITGKDLK 57
LDLS N +S L + L+S + +L+ G T I KG G+++ K+ L + L+
Sbjct: 71 LDLSMNNISQLPPSPLHSLRFLEELRLAGNALTYIPKG-AFAGLYSLKV--LMLQNNHLR 127
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLD---LSH------NKL 108
+ A N+ + +L++ +I +P F + ++ + LD L+ L
Sbjct: 128 QVPTEALQNLRSLQ--SLRLDANRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSL 185
Query: 109 SVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
S L TL N K+ H+ + N+I L F L ++
Sbjct: 186 SALQAMTLALN--KIHHIPDYAFGNLSSLVVLHLHN----NRIHSLGKKCFDGLHS--LE 237
Query: 169 AKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIE 228
N NN D+ + N I + F +L + N +Q++
Sbjct: 238 TLDLNYNNLDEFPTAVRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLV- 296
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
+ F +L+ L ++ EFP +LE L + I ++ L
Sbjct: 297 -GRSAFQHLPELRTLTLN-GASQITEFPDLT---GTASLESLTLTGAQISSLPQTVCDQL 351
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
+L ++L YN + + + F++ ++L++I L +N + I++DTF L L ++ L++
Sbjct: 352 PNLQVLDLSYNLLEDLPS----FSVCQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAW 407
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
N + I +F L ++ + LS N++ I P L L L L N
Sbjct: 408 NKIAIIDPNAFSTLPSLRKLDLSSNRLSSI-P--VTGLHGLTHLKLTGN 453
>UNIPROTKB|Q9H156 [details] [associations]
symbol:SLITRK2 "SLIT and NTRK-like protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:Y19205 EMBL:AY358828 EMBL:AK091015
EMBL:AK289732 EMBL:AL109653 EMBL:BC113011 EMBL:BC113012
EMBL:AB058757 IPI:IPI00176104 IPI:IPI00410358 RefSeq:NP_001137475.1
RefSeq:NP_001137476.1 RefSeq:NP_001137477.1 RefSeq:NP_001137478.1
RefSeq:NP_001137480.1 RefSeq:NP_001137481.1 RefSeq:NP_001137482.1
RefSeq:NP_115928.1 UniGene:Hs.320368 ProteinModelPortal:Q9H156
SMR:Q9H156 STRING:Q9H156 PhosphoSite:Q9H156 DMDM:46397026
PaxDb:Q9H156 PRIDE:Q9H156 Ensembl:ENST00000370490
Ensembl:ENST00000413937 Ensembl:ENST00000428560
Ensembl:ENST00000434188 Ensembl:ENST00000447897 GeneID:84631
KEGG:hsa:84631 UCSC:uc004fcd.3 CTD:84631 GeneCards:GC0XP144900
H-InvDB:HIX0017096 H-InvDB:HIX0176721 HGNC:HGNC:13449 HPA:HPA051847
MIM:300561 neXtProt:NX_Q9H156 PharmGKB:PA134968225 eggNOG:NOG147171
InParanoid:Q9H156 OMA:LQADYNY PhylomeDB:Q9H156 ChiTaRS:SLITRK2
GenomeRNAi:84631 NextBio:74551 ArrayExpress:Q9H156 Bgee:Q9H156
CleanEx:HS_SLITRK2 Genevestigator:Q9H156 GermOnline:ENSG00000185985
Uniprot:Q9H156
Length = 845
Score = 173 (66.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 45/163 (27%), Positives = 84/163 (51%)
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
K+ +N+N N T + Q IY L L+ N + + N +++++ L+L
Sbjct: 38 KENVLNINCENKGFTTVSLLQPPQYRIY--QLFLNGNLLTRLYPNEFVNYSNAVT-LHLG 94
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++ + AF L L+ L L +N + ++ + TF+G+ +L+ + +N IS + F
Sbjct: 95 NNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYISAIEAGAF 154
Query: 533 YFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
KL++L ++ N L SLP +VF ++ LD+ N+ K+ P
Sbjct: 155 SKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMP 197
Score = 172 (65.6 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 50/158 (31%), Positives = 79/158 (50%)
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
S +N+N TN+ +D + P K L L+ N +Q V N L ++ SL L+L
Sbjct: 350 SSDNGLNVNCQERKFTNI--SDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS-SLDLLHL 406
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N I + AF NL L L L N + V+ F G+ +LQ + L +N I +
Sbjct: 407 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLT 466
Query: 532 FYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N LRSLP ++F T + +L++ N
Sbjct: 467 FDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNN 504
Score = 147 (56.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 289 TSLNYINLEYNKISKIH-NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
TS + L N + ++ N+L ++ L + L NN + +I+ F NL L + L+
Sbjct: 375 TSPKKLYLTGNYLQTVYKNDLLEYS---SLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLN 431
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N L+ + + F L ++ + L +N IK I P F L NL L L +N L+ N+F
Sbjct: 432 GNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIF 491
Query: 408 SNITSKQTPMNLNLSNNYITNL-YENDKKQAPIYIKSLDLSNN 449
+ LNL NN+ ++L + Q P +I+ +DL N
Sbjct: 492 GGTALTR----LNLRNNHFSHLPVKGVLDQLPAFIQ-IDLQEN 529
Score = 144 (55.7 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L ++ N + + N ++ ++L N + +I F + K LK + L+NN LE+
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFS-GL-KTLKRLHLNNNKLEI 124
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + YN + +I+ +F LN + ++L+ N + + N F L
Sbjct: 125 LREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVF-RFVLL 183
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 184 THLDLRGNRLK 194
Score = 118 (46.6 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 36/146 (24%), Positives = 74/146 (50%)
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
NEF Y N TL + NN ++ IR + L +L ++L NK+ + + F
Sbjct: 80 NEFVNY---SNAVTLH---LGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTF-LG 132
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ L+ ++ NY+ IE+ F L +L + L+ NLL S+ + F+ + + ++ L
Sbjct: 133 LES-LEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRG 190
Query: 373 NQIKYI-YPNAFVNLPNLVKLDLQDN 397
N++K + + ++ ++++ L++N
Sbjct: 191 NRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 111 (44.1 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L N +++++ N F N + + L NN L+ I + F LK L + L+ N L+ ++
Sbjct: 69 LNGNLLTRLYPNEF-VN-YSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILR 126
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+F L ++ + +N I I AF L L L L DN L NVF
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVF 178
Score = 111 (44.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 46/159 (28%), Positives = 78/159 (49%)
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT 427
+ L+ N ++ +Y N + +L L L +N++ F+N+TS + L L+ NY+
Sbjct: 380 LYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLR---RLYLNGNYLE 436
Query: 428 NLYEN--DKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAF 484
LY + D Q+ Y L L N I+E+ P+ F +L+ L+L+ N ++ L F
Sbjct: 437 VLYPSMFDGLQSLQY---LYLEYNVIKEIKPLTFDALI--NLQLLFLNNNLLRSLPDNIF 491
Query: 485 GNLDVLELLSLEHNNIA-VVVKRTFIGMPNLQIIDLSFN 522
G L L+L +N+ + + VK +P IDL N
Sbjct: 492 GGT-ALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQEN 529
Score = 81 (33.6 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 203 LNGNLFRHLY--------NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
LNGNL LY N L L N LQ E+ + F + L+ L + N+N+
Sbjct: 69 LNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQ--EIRTGAFSGLKTLKRLHL-----NNNK 121
Query: 255 FPYYILNKN----LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH 310
IL ++ L +LE+L D N I I + L L + L N + + +N+F
Sbjct: 122 LE--ILREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
Query: 311 FNIHKRLKEIRLSNNYLELI 330
F + L + L N L+++
Sbjct: 180 FVL---LTHLDLRGNRLKVM 196
Score = 79 (32.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + ++ F L L+ L L+ NKL+I L + F E L+ L+ ++ ++ E
Sbjct: 96 NGLQEIRTGAFSGLKTLKRLHLNNNKLEI--LREDTFLGLESLEYLQADYNYISAIEAGA 153
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN--KISKIHNNLFHFNIHK 315
+ LN L+ L +++N + ++ + +++ L +++L N K+ L H
Sbjct: 154 F---SKLNKLKVLILNDNLLLSLPS-NVFRFVLLTHLDLRGNRLKVMPFAGVLEHIG--- 206
Query: 316 RLKEIRLSNN 325
+ EI+L N
Sbjct: 207 GIMEIQLEEN 216
Score = 78 (32.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
++ +L + G L + P+ F N +TL + N ++E+ +G F ++ +++ L L+
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNA--VTLHLGNNGLQEIRTGAFSGLKTLKR--LHLN 118
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNK--ITDLNGNLFRHL 162
+NKL +L T + + L++L D + NK + LN NL L
Sbjct: 119 NNKLEILREDT-FLGLESLEYLQA----DYNYISAIEAGAFSKLNKLKVLILNDNLLLSL 173
Query: 163 QKSIVK 168
++ +
Sbjct: 174 PSNVFR 179
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 264 (98.0 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 96/357 (26%), Positives = 158/357 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ ++ L L+ L+L N+L+ + S LQ L + + S
Sbjct: 174 NDLSFIHPKALSGLKELKVLTLQNNQLKTVP--SEAIRGLSSLQSLRLDANHITSVPEDS 231
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L L +D+N++ + + L NL +L + L NKIS I + F F L
Sbjct: 232 F---EGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPD--FAFTNLSSL 286
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + F L L T+ L+YN L + K L ++ ++ N I
Sbjct: 287 VVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISV 345
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF P L + L DN L + F N++ + L + + + N
Sbjct: 346 IPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSELHS---LVIRGASMVQRFPN--LTG 400
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+ ++SL L+ +I + N Q LR L L +N IK D +F LE +SL+
Sbjct: 401 TVRLESLTLTGTKISSISNNLCQE-QKRLRTLDLSYNSIK--DLPSFNGCHALEEISLQR 457
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
N I + + TF G+ +L+I+DLS N I + F + L++S N L S P +
Sbjct: 458 NQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFNELTSFPTE 514
Score = 215 (80.7 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 88/356 (24%), Positives = 162/356 (45%)
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
Q L +S N I +L + F F L+ L ++ N F + L L+ L + N
Sbjct: 143 QLLDISMNN--ITQLPEDAFKNFPFLEELRLAG---NDLSFIHPKALSGLKELKVLTLQN 197
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N +K + + ++ L+SL + L+ N I+ + + F + +L+ + L +N L +
Sbjct: 198 NQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFE-GL-TQLRHLWLDDNSLTEVPVHP 255
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
NL L +TL+ N + SI +F NL++++ + L N+IK + + F L NL LDL
Sbjct: 256 LSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDL 315
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
N L +F + + + K+ L +N I+ + + P+ +K++ L +N + V
Sbjct: 316 NYNNLGEFPQAIKALPSLKE----LLFHSNSISVIPDGAFDGNPL-LKTIHLYDNPLSFV 370
Query: 455 PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNL 514
+ ++ L L + + G + LE L+L I+ + L
Sbjct: 371 GNSAFHNLSE-LHSLVIRGASMVQRFPNLTGTVR-LESLTLTGTKISSISNNLCQEQKRL 428
Query: 515 QIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
+ +DLS+N I L F L +++ N++ + D F T ++ LD+S N
Sbjct: 429 RTLDLSYNSIKDLPS--FNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRN 482
Score = 200 (75.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 78/308 (25%), Positives = 135/308 (43%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + NNI + + N L + L N +S IH + K LK + L NN L+
Sbjct: 145 LDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALS-GL-KELKVLTLQNNQLKT 202
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ S+ L L ++ L N + S+ SF+ L + ++ L N + + + NLP L
Sbjct: 203 VPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTL 262
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L L NK+ F+N++S L+L NN I +L ++ +++LDL+ N
Sbjct: 263 QALTLALNKISSIPDFAFTNLSSLVV---LHLHNNKIKSLGQHCFDGLD-NLETLDLNYN 318
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+ E P ++ SL++L N I + AF +L+ + L N ++ V F
Sbjct: 319 NLGEFP-QAIKALP-SLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFH 376
Query: 510 GMPNLQIIDLSFNEISMLTG-EQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDIS 567
+ L L SM+ + +L L ++ ++ S+ ++ + LD+S
Sbjct: 377 NLSELH--SLVIRGASMVQRFPNLTGTVRLESLTLTGTKISSISNNLCQEQKRLRTLDLS 434
Query: 568 YNQDKIRP 575
YN K P
Sbjct: 435 YNSIKDLP 442
Score = 194 (73.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 115/456 (25%), Positives = 196/456 (42%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTL---DL 103
R ++ +GK L + P + + A L L I+ I +LP F +E++ L DL
Sbjct: 122 RRVDCSGKGLTAV-P---EGLSAFTQL-LDISMNNITQLPEDAFKNFPFLEELRLAGNDL 176
Query: 104 S--HNK----LSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGN 157
S H K L L + TL +N K T+ + + N IT + +
Sbjct: 177 SFIHPKALSGLKELKVLTLQNNQLK------TVPSEAIRGLSSLQSLRLDANHITSVPED 230
Query: 158 LFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQEL 217
F L + +N+ E V NKI+ + F +L +L L
Sbjct: 231 SFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLA-LNKISSIPDFAFTNLSSLVVL 289
Query: 218 SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNI 277
L NK++ L + FD + L+ L+++++ N EFP I K L +L+ L +N+I
Sbjct: 290 HLHNNKIK--SLGQHCFDGLDNLETLDLNYN--NLGEFPQAI--KALPSLKELLFHSNSI 343
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
I + + L I+L N +S + N+ FH N+ + + + ++ + T
Sbjct: 344 SVIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFH-NLSELHSLVIRGASMVQRFPNLT--G 400
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L ++TL+ + SI + + + LS+N IK + P+ F L ++ LQ N
Sbjct: 401 TVRLESLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDL-PS-FNGCHALEEISLQRN 458
Query: 398 KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI-YIKSLDLSNNRIQEVPV 456
++ + F +TS + L+LS N I + +D+ A + I +LD+S N + P
Sbjct: 459 QIHQIKEDTFQGLTSLKI---LDLSRNLIHEI--DDRAFAKLGSITNLDVSFNELTSFPT 513
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
L + L KL +F + L A F NL L +
Sbjct: 514 EGLNGL-NQL-KLVGNFKLKEALAAKDFVNLRSLSV 547
Score = 186 (70.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 97/399 (24%), Positives = 162/399 (40%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L EL + G DL FI P A + LTL+ N Q++ +PS + +++ + LD +H
Sbjct: 166 LEELRLAGNDLSFIHPKALSGLKELKVLTLQ--NNQLKTVPSEAIRGLSSLQSLRLDANH 223
Query: 106 -------NKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNL 158
+ + + L+ + L + L + NKI+ +
Sbjct: 224 ITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLAL----NKISSIPDFA 279
Query: 159 FRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELS 218
F +L S+V +NN + N + + + L +L+EL
Sbjct: 280 FTNLS-SLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFP-QAIKALPSLKELL 337
Query: 219 LSFNKLQIIELNSNVFD---VFEKLQLLE--ISF---SLF-NSNEFPYYILN-------- 261
N + +I FD + + + L + +SF S F N +E ++
Sbjct: 338 FHSNSISVIP--DGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSELHSLVIRGASMVQRF 395
Query: 262 KNLN---TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
NL LE L + I +I N L ++L YN I + + FN L+
Sbjct: 396 PNLTGTVRLESLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDLPS----FNGCHALE 451
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
EI L N + I+ DTF L L + LS NL+ I +F L ++ N+ +SFN++
Sbjct: 452 EISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFNELTS- 510
Query: 379 YPNAFVNLPNLVKLDLQDNKLKD-FNLNVFSNITSKQTP 416
+P +N N +KL + + KLK+ F N+ S P
Sbjct: 511 FPTEGLNGLNQLKL-VGNFKLKEALAAKDFVNLRSLSVP 548
Score = 172 (65.6 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 82/322 (25%), Positives = 137/322 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T++ + +L LQ L+L+ NK+ I F L +L + + S
Sbjct: 246 NSLTEVPVHPLSNLPTLQALTLALNKISSIP--DFAFTNLSSLVVLHLHNNKIKS--LGQ 301
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L+ LE L ++ NN+ ++ L SL + N IS I + F N L
Sbjct: 302 HCFD-GLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGN--PLL 357
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNML---NIVLSFNQ 374
K I L +N L + + F+NL EL+++ + + F NL + ++ L+ +
Sbjct: 358 KTIHLYDNPLSFVGNSAFHNLSELHSLVIR----GASMVQRFPNLTGTVRLESLTLTGTK 413
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
I I N L LDL N +KD L F+ + + ++L N I + E D
Sbjct: 414 ISSISNNLCQEQKRLRTLDLSYNSIKD--LPSFNGCHALE---EISLQRNQIHQIKE-DT 467
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
Q +K LDLS N I E+ S+ L + FNE+ L+ L+L+
Sbjct: 468 FQGLTSLKILDLSRNLIHEIDDRAFAKLG-SITNLDVSFNELTSFPTEGLNGLNQLKLVG 526
Query: 495 LEHNNIAVVVKRTFIGMPNLQI 516
A+ K F+ + +L +
Sbjct: 527 NFKLKEALAAK-DFVNLRSLSV 547
Score = 157 (60.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 56/214 (26%), Positives = 97/214 (45%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+S N I + +AF N P L +L L N L + S + K+ + L L NN + +
Sbjct: 147 ISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGL--KELKV-LTLQNNQLKTV 203
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
++ + ++SL L N I VP + + LR L+LD N + + NL
Sbjct: 204 -PSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQ-LRHLWLDDNSLTEVPVHPLSNLPT 261
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ L+L N I+ + F + +L ++ L N+I L F L L++++N L
Sbjct: 262 LQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLG 321
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIRP-GR-ESNP 581
P+ + + +++L N + P G + NP
Sbjct: 322 EFPQAIKALPSLKELLFHSNSISVIPDGAFDGNP 355
Score = 125 (49.1 bits), Expect = 0.00043, P = 0.00043
Identities = 35/132 (26%), Positives = 66/132 (50%)
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ + LD+S N I ++P + + F L +L L N++ + A L L++L+L++N
Sbjct: 141 FTQLLDISMNNITQLPEDAFKNFP-FLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQ 199
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
+ V G+ +LQ + L N I+ + + F +LR L + N L +P SN
Sbjct: 200 LKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNL 259
Query: 560 -IIEKLDISYNQ 570
++ L ++ N+
Sbjct: 260 PTLQALTLALNK 271
>UNIPROTKB|F1RQ61 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:FP236785 RefSeq:XP_003135487.1
Ensembl:ENSSSCT00000013911 Ensembl:ENSSSCT00000034054
Ensembl:ENSSSCT00000034972 Ensembl:ENSSSCT00000035609
GeneID:100511615 KEGG:ssc:100511615 Uniprot:F1RQ61
Length = 849
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 46/163 (28%), Positives = 84/163 (51%)
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
K+ +N+N N T + Q IY L L+ N + + N +++++ L+L
Sbjct: 38 KENVLNINCENKGFTTVSLLQPPQYRIY--QLFLNGNLLTRLYPNEFVNYSNAVT-LHLG 94
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++ + AF L L+ L L +N + V+ + TF+G+ +L+ + +N IS + F
Sbjct: 95 NNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAF 154
Query: 533 YFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
KL++L ++ N L SLP +VF ++ LD+ N+ K+ P
Sbjct: 155 SKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMP 197
Score = 172 (65.6 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 50/158 (31%), Positives = 79/158 (50%)
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
S +N+N TN+ +D + P K L L+ N +Q V N L ++ SL L+L
Sbjct: 354 SSDNGLNVNCQERKFTNI--SDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS-SLDLLHL 410
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N I + AF NL L L L N + V+ F G+ +LQ + L +N I +
Sbjct: 411 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMFDGLQSLQYLYLEYNVIKEIKPLT 470
Query: 532 FYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N LRSLP ++F T + +L++ N
Sbjct: 471 FDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNN 508
Score = 146 (56.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 289 TSLNYINLEYNKISKIH-NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
TS + L N + ++ N+L ++ L + L NN + +I+ F NL L + L+
Sbjct: 379 TSPKKLYLTGNYLQTVYKNDLLEYS---SLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLN 435
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N L+ + F L ++ + L +N IK I P F L NL L L +N L+ N+F
Sbjct: 436 GNYLEVLYPAMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIF 495
Query: 408 SNITSKQTPMNLNLSNNYITNL-YENDKKQAPIYIKSLDLSNN 449
+ LNL NN+ ++L + Q P +I+ +DL N
Sbjct: 496 GGTALTR----LNLRNNHFSHLPVKGVLDQLPAFIQ-IDLQEN 533
Score = 143 (55.4 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L ++ N + + N ++ ++L N + +I F + K LK + L+NN LE+
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFS-GL-KTLKRLHLNNNKLEV 124
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + YN + +I+ +F LN + ++L+ N + + N F L
Sbjct: 125 LREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVF-RFVLL 183
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 184 THLDLRGNRLK 194
Score = 119 (46.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 36/146 (24%), Positives = 74/146 (50%)
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
NEF Y N TL + NN ++ IR + L +L ++L NK+ + + F
Sbjct: 80 NEFVNY---SNAVTLH---LGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTF-LG 132
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ L+ ++ NY+ IE+ F L +L + L+ NLL S+ + F+ + + ++ L
Sbjct: 133 LES-LEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRG 190
Query: 373 NQIKYI-YPNAFVNLPNLVKLDLQDN 397
N++K + + ++ ++++ L++N
Sbjct: 191 NRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 111 (44.1 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L N +++++ N F N + + L NN L+ I + F LK L + L+ N L+ ++
Sbjct: 69 LNGNLLTRLYPNEF-VN-YSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+F L ++ + +N I I AF L L L L DN L NVF
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVF 178
Score = 108 (43.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT 427
+ L+ N ++ +Y N + +L L L +N++ F+N+TS + L L+ NY+
Sbjct: 384 LYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLR---RLYLNGNYLE 440
Query: 428 NLYEN--DKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAF 484
LY D Q+ Y L L N I+E+ P+ F +L+ L+L+ N ++ L F
Sbjct: 441 VLYPAMFDGLQSLQY---LYLEYNVIKEIKPLTFDALI--NLQLLFLNNNLLRSLPDNIF 495
Query: 485 GNLDVLELLSLEHNNIA-VVVKRTFIGMPNLQIIDLSFN 522
G L L+L +N+ + + VK +P IDL N
Sbjct: 496 GGT-ALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQEN 533
Score = 80 (33.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 39/140 (27%), Positives = 62/140 (44%)
Query: 203 LNGNLFRHLY--------NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
LNGNL LY N L L N LQ E+ + F + L+ L + N+N+
Sbjct: 69 LNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQ--EIRTGAFSGLKTLKRLHL-----NNNK 121
Query: 255 FPYYILNKN----LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH 310
+L ++ L +LE+L D N I I + L L + L N + + +N+F
Sbjct: 122 LE--VLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
Query: 311 FNIHKRLKEIRLSNNYLELI 330
F + L + L N L+++
Sbjct: 180 FVL---LTHLDLRGNRLKVM 196
Score = 79 (32.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
++ +L + G L + P+ F N +TL + N ++E+ +G F ++ +++ L L+
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNA--VTLHLGNNGLQEIRTGAFSGLKTLKR--LHLN 118
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNK--ITDLNGNLFRHL 162
+NKL VL T + + L++L D + NK + LN NL L
Sbjct: 119 NNKLEVLREDT-FLGLESLEYLQA----DYNYISAIEAGAFSKLNKLKVLILNDNLLLSL 173
Query: 163 QKSIVK 168
++ +
Sbjct: 174 PSNVFR 179
Score = 78 (32.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + ++ F L L+ L L+ NKL++ L + F E L+ L+ ++ ++ E
Sbjct: 96 NGLQEIRTGAFSGLKTLKRLHLNNNKLEV--LREDTFLGLESLEYLQADYNYISAIEAGA 153
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN--KISKIHNNLFHFNIHK 315
+ LN L+ L +++N + ++ + +++ L +++L N K+ L H
Sbjct: 154 F---SKLNKLKVLILNDNLLLSLPS-NVFRFVLLTHLDLRGNRLKVMPFAGVLEHIG--- 206
Query: 316 RLKEIRLSNN 325
+ EI+L N
Sbjct: 207 GIMEIQLEEN 216
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 263 (97.6 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 96/357 (26%), Positives = 158/357 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ ++ L L+ L+L N+L+ + S LQ L + + S
Sbjct: 67 NDLSFIHPKALSGLKELKVLTLQNNQLKTVP--SEAIRGLSALQSLRLDANHITSVPEDS 124
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L L +D+N++ + + L NL +L + L NKIS I + F F L
Sbjct: 125 F---EGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPD--FAFTNLSSL 179
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN + + F L L T+ L+YN L + K L ++ + N I
Sbjct: 180 VVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISV 238
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF P L + L DN L + F N++ + L + + + N
Sbjct: 239 IPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS---LVIRGASMVQQFPN--LTG 293
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++++SL L+ +I +P N Q LR L L +N I+ D +F LE +SL+
Sbjct: 294 TVHLESLTLTGTKISSIPNNLCQE-QKMLRTLDLSYNNIR--DLPSFNGCHALEEISLQR 350
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
N I + + TF G+ +L+I+DLS N I + F + L++S N L S P +
Sbjct: 351 NQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTE 407
Score = 216 (81.1 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 76/303 (25%), Positives = 140/303 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N++ I +L L L + L+ N++ + + + L+ +RL N++
Sbjct: 62 LQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIR-GL-SALQSLRLDANHITS 119
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ D+F L +L + L N L + NL + + L+ N+I I AF NL +L
Sbjct: 120 VPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSL 179
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
V L L +NK++ + + F + + +T ++LN +N + K P +K L +N
Sbjct: 180 VVLHLHNNKIRSLSQHCFDGLDNLET-LDLNYNN---LGEFPQAIKALPS-LKELGFHSN 234
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK-RTF 508
I +P LR ++L N + + +AF NL +L SL ++V +
Sbjct: 235 SISVIPDGAFDG-NPLLRTIHLYDNPLSFVGNSAFHNLS--DLHSLVIRGASMVQQFPNL 291
Query: 509 IGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDIS 567
G +L+ + L+ +IS + LR L++S+N +R LP F+ +E++ +
Sbjct: 292 TGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQ 349
Query: 568 YNQ 570
NQ
Sbjct: 350 RNQ 352
Score = 201 (75.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 80/325 (24%), Positives = 150/325 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L+ L + NN +K + + ++ L++L + L+ N I+ + + F + +L+ + L
Sbjct: 80 LKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLV--QLRHLWLD 137
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
+N L + NL L +TL+ N + SI +F NL++++ + L N+I+ + + F
Sbjct: 138 DNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCF 197
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
L NL LDL N L +F + + + K+ + N + ++ + I++
Sbjct: 198 DGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYD 257
Query: 444 LDLS---NNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDA-TAFG--------NL--- 487
LS N+ + ++ L S+ + + + HL++ T G NL
Sbjct: 258 NPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQE 317
Query: 488 -DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
+L L L +NNI + +F G L+ I L N+I + F LRIL++S N
Sbjct: 318 QKMLRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRN 375
Query: 547 RLRSLPRDVFSNT-IIEKLDISYNQ 570
+ + F+ I LD+S+N+
Sbjct: 376 LIHEIHSRAFATLGPITNLDVSFNE 400
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 83/349 (23%), Positives = 152/349 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT + + F L L+ L L N L E+ + LQ L ++ + +S P
Sbjct: 115 NHITSVPEDSFEGLVQLRHLWLDDNSLT--EVPVHPLSNLPTLQALTLALNKISS--IPD 170
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ NL++L L + NN I+++ + L +L ++L YN + + + L
Sbjct: 171 FAFT-NLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAI---KALPSL 226
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
KE+ +N + +I F L TI L N L + ++F NL+++ ++V+ +
Sbjct: 227 KELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ 286
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQ 436
+PN +L L L K+ ++ +N+ +Q + L+LS N I +L +
Sbjct: 287 QFPN-LTGTVHLESLTLTGTKIS----SIPNNLCQEQKMLRTLDLSYNNIRDLPSFNGCH 341
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
A ++ + L N+I ++ Q SLR L L N I + + AF L + L +
Sbjct: 342 A---LEEISLQRNQIYQIKEGTFQGLI-SLRILDLSRNLIHEIHSRAFATLGPITNLDVS 397
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
N + G+ L+++ +F L + F LR L++ +
Sbjct: 398 FNELTSFPTEGLNGLNQLKLVG-NFKLKEALAAKDFV---NLRSLSVPY 442
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 48/192 (25%), Positives = 86/192 (44%)
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI 451
L L N L + S + K+ + L L NN + + ++ + ++SL L N I
Sbjct: 62 LQLAGNDLSFIHPKALSGL--KELKV-LTLQNNQLKTV-PSEAIRGLSALQSLRLDANHI 117
Query: 452 QEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGM 511
VP + + LR L+LD N + + NL L+ L+L N I+ + F +
Sbjct: 118 TSVPEDSFEGLVQ-LRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNL 176
Query: 512 PNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQD 571
+L ++ L N+I L+ F L L++++N L P+ + + +++L N
Sbjct: 177 SSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSI 236
Query: 572 KIRP-GR-ESNP 581
+ P G + NP
Sbjct: 237 SVIPDGAFDGNP 248
Score = 123 (48.4 bits), Expect = 0.00062, P = 0.00062
Identities = 88/400 (22%), Positives = 166/400 (41%)
Query: 3 LDLSHNKLSVLNMATLYS----NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
L L+ N LS ++ L V LQ+ + + ++G+ S L+ L + +
Sbjct: 62 LQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGL--SALQSLRLDANHITS 119
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL-NMATLY 117
+ +F+ + L L + + E+P + ++ +TL L NK+S + + A +
Sbjct: 120 VPEDSFEGLVQLRHLWLD--DNSLTEVPVHPLSNLPTLQALTLAL--NKISSIPDFA--F 173
Query: 118 SNVTKLQ--HLGTTILKDREKXXXXXXXXXXRCNKITDLN-GNL--FRHLQKSIVKAKKN 172
+N++ L HL ++ + + DLN NL F K++ K+
Sbjct: 174 TNLSSLVVLHLHNNKIRSLSQHCFDGLDNL----ETLDLNYNNLGEFPQAIKALPSLKEL 229
Query: 173 --NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQEL-SLSFNKLQIIEL 229
++N+ + D + GN H NL +L SL +++
Sbjct: 230 GFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFH--NLSDLHSLVIRGASMVQQ 287
Query: 230 NSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLT 289
N+ L+ L ++ + +S P + + L L + NNI+++ +++
Sbjct: 288 FPNLTGTVH-LESLTLTGTKISS--IPNNLCQEQ-KMLRTLDLSYNNIRDLPSFN--GCH 341
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
+L I+L+ N+I +I F I R+ + LS N + I S F L + + +S+N
Sbjct: 342 ALEEISLQRNQIYQIKEGTFQGLISLRILD--LSRNLIHEIHSRAFATLGPITNLDVSFN 399
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
L S T LN L +V +F + + FVNL +L
Sbjct: 400 ELTSFPTEGLNGLNQ-LKLVGNFKLKEALAAKDFVNLRSL 438
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 263 (97.6 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 96/357 (26%), Positives = 158/357 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ ++ L L+ L+L N+L+ + S LQ L + + S
Sbjct: 91 NDLSFIHPKALSGLKELKVLTLQNNQLKTVP--SEAIRGLSALQSLRLDANHITSVPEDS 148
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L L +D+N++ + + L NL +L + L NKIS I + F F L
Sbjct: 149 F---EGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPD--FAFTNLSSL 203
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN + + F L L T+ L+YN L + K L ++ + N I
Sbjct: 204 VVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISV 262
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF P L + L DN L + F N++ + L + + + N
Sbjct: 263 IPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS---LVIRGASMVQQFPN--LTG 317
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++++SL L+ +I +P N Q LR L L +N I+ D +F LE +SL+
Sbjct: 318 TVHLESLTLTGTKISSIPNNLCQE-QKMLRTLDLSYNNIR--DLPSFNGCHALEEISLQR 374
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
N I + + TF G+ +L+I+DLS N I + F + L++S N L S P +
Sbjct: 375 NQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTE 431
Score = 235 (87.8 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 86/332 (25%), Positives = 153/332 (46%)
Query: 241 QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
Q L+IS + N + P KN LE L + N++ I +L L L + L+ N+
Sbjct: 60 QALDISMN--NITQLPEDAF-KNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQ 116
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
+ + + + L+ +RL N++ + D+F L +L + L N L +
Sbjct: 117 LKTVPSEAIR-GL-SALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLS 174
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
NL + + L+ N+I I AF NL +LV L L +NK++ + + F + + +T ++LN
Sbjct: 175 NLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLET-LDLN 233
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
+N + K P +K L +N I +P LR ++L N + +
Sbjct: 234 YNN---LGEFPQAIKALPS-LKELGFHSNSISVIPDGAFDG-NPLLRTIHLYDNPLSFVG 288
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVK-RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
+AF NL +L SL ++V + G +L+ + L+ +IS + LR
Sbjct: 289 NSAFHNLS--DLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKMLR 346
Query: 540 ILNISHNRLRSLPRDVFSNT-IIEKLDISYNQ 570
L++S+N +R LP F+ +E++ + NQ
Sbjct: 347 TLDLSYNNIRDLPS--FNGCHALEEISLQRNQ 376
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 83/349 (23%), Positives = 152/349 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT + + F L L+ L L N L E+ + LQ L ++ + +S P
Sbjct: 139 NHITSVPEDSFEGLVQLRHLWLDDNSLT--EVPVHPLSNLPTLQALTLALNKISS--IPD 194
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ NL++L L + NN I+++ + L +L ++L YN + + + L
Sbjct: 195 FAFT-NLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAI---KALPSL 250
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
KE+ +N + +I F L TI L N L + ++F NL+++ ++V+ +
Sbjct: 251 KELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ 310
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQ 436
+PN +L L L K+ ++ +N+ +Q + L+LS N I +L +
Sbjct: 311 QFPN-LTGTVHLESLTLTGTKIS----SIPNNLCQEQKMLRTLDLSYNNIRDLPSFNGCH 365
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
A ++ + L N+I ++ Q SLR L L N I + + AF L + L +
Sbjct: 366 A---LEEISLQRNQIYQIKEGTFQGLI-SLRILDLSRNLIHEIHSRAFATLGPITNLDVS 421
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
N + G+ L+++ +F L + F LR L++ +
Sbjct: 422 FNELTSFPTEGLNGLNQLKLVG-NFKLKEALAAKDFV---NLRSLSVPY 466
Score = 175 (66.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 113/459 (24%), Positives = 192/459 (41%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTL---DL 103
R ++ +GK L + P + + L I+ I +LP F +E++ L DL
Sbjct: 39 RRVDCSGKGLTAV-PEGL----SAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDL 93
Query: 104 S--HNK----LSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGN 157
S H K L L + TL +N K T+ + + N IT + +
Sbjct: 94 SFIHPKALSGLKELKVLTLQNNQLK------TVPSEAIRGLSALQSLRLDANHITSVPED 147
Query: 158 LFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQEL 217
F L + +N+ E V NKI+ + F +L +L L
Sbjct: 148 SFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLA-LNKISSIPDFAFTNLSSLVVL 206
Query: 218 SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNI 277
L NK++ L+ + FD + L+ L+++++ N EFP I K L +L+ L +N+I
Sbjct: 207 HLHNNKIR--SLSQHCFDGLDNLETLDLNYN--NLGEFPQAI--KALPSLKELGFHSNSI 260
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
I + + L I+L N +S + N+ FH N+ L + + +++ F N
Sbjct: 261 SVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFH-NLSD-LHSLVIRG--ASMVQQ--FPN 314
Query: 338 LK---ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
L L ++TL+ + SI + + + LS+N I+ + P+ F L ++ L
Sbjct: 315 LTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDL-PS-FNGCHALEEISL 372
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND-KKQAPIYIKSLDLSNNRIQE 453
Q N++ F + S + L+LS N I ++ PI +LD+S N +
Sbjct: 373 QRNQIYQIKEGTFQGLISLRI---LDLSRNLIHEIHSRAFATLGPI--TNLDVSFNELTS 427
Query: 454 VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
P L + L KL +F + L A F NL L +
Sbjct: 428 FPTEGLNGL-NQL-KLVGNFKLKEALAAKDFVNLRSLSV 464
Score = 164 (62.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 56/214 (26%), Positives = 98/214 (45%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+S N I + +AF N P L +L L N L + S + K+ + L L NN + +
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGL--KELKV-LTLQNNQLKTV 120
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
++ + ++SL L N I VP + + LR L+LD N + + NL
Sbjct: 121 -PSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQ-LRHLWLDDNSLTEVPVHPLSNLPT 178
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ L+L N I+ + F + +L ++ L N+I L+ F L L++++N L
Sbjct: 179 LQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLG 238
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIRP-GR-ESNP 581
P+ + + +++L N + P G + NP
Sbjct: 239 EFPQAIKALPSLKELGFHSNSISVIPDGAFDGNP 272
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 35/132 (26%), Positives = 66/132 (50%)
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ ++LD+S N I ++P + + F L +L L N++ + A L L++L+L++N
Sbjct: 58 FTQALDISMNNITQLPEDAFKNFP-FLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQ 116
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
+ V G+ LQ + L N I+ + + F +LR L + N L +P SN
Sbjct: 117 LKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNL 176
Query: 560 -IIEKLDISYNQ 570
++ L ++ N+
Sbjct: 177 PTLQALTLALNK 188
Score = 125 (49.1 bits), Expect = 0.00039, P = 0.00039
Identities = 93/415 (22%), Positives = 166/415 (40%)
Query: 3 LDLSHNKLSVLNMATL--YSNVTKLQHLGTTI--LKGDQLQGIFNSKLRELEITGKDLKF 58
LD+S N ++ L + + +LQ G + + L G+ +L+ L + LK
Sbjct: 62 LDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGL--KELKVLTLQNNQLKT 119
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLD---LSHNKLSVL-NMA 114
+ A + A L L + I +P F+ + + + LD L+ + L N+
Sbjct: 120 VPSEAIRGLSALQSLRLDANH--ITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLP 177
Query: 115 TLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNN 174
TL + L + ++I NKI L+ + F L ++ N
Sbjct: 178 TLQALTLALNKI-SSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDN--LETLDLNY 234
Query: 175 NNEDQVSDREKXXXXXXXXXXRCNKITDL-----NGN-LFR--HLYNLQELSL----SFN 222
NN + K N I+ + +GN L R HLY+ LS +F+
Sbjct: 235 NNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYD-NPLSFVGNSAFH 293
Query: 223 KLQ----IIELNSNVFDVFEKL----QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
L ++ +++ F L L ++ + + P + + L L +
Sbjct: 294 NLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQ-KMLRTLDLSY 352
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
NNI+++ +++ +L I+L+ N+I +I F I R+ + LS N + I S
Sbjct: 353 NNIRDLPSFN--GCHALEEISLQRNQIYQIKEGTFQGLISLRILD--LSRNLIHEIHSRA 408
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
F L + + +S+N L S T LN L +V +F + + FVNL +L
Sbjct: 409 FATLGPITNLDVSFNELTSFPTEGLNGLNQ-LKLVGNFKLKEALAAKDFVNLRSL 462
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 262 (97.3 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 97/357 (27%), Positives = 158/357 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ ++ L L+ L+L N+L+ + S LQ L + + S
Sbjct: 26 NDLSFIHPKALSGLKELKVLTLQNNQLKTVP--SEAIRGLSALQSLRLDANHITSVPEDS 83
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L L +D+N++ + L NL +L + L NKIS I + F F L
Sbjct: 84 F---EGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPD--FAFTNLSSL 138
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + F L L T+ L+YN L + K L ++ ++ N I
Sbjct: 139 VVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISV 197
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF P L + L DN L + F N++ + L + + + N
Sbjct: 198 IPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS---LVIRGASMVQRFPN--LTG 252
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++++SL L+ +I + N Q LR L L +N IK D +F LE +SL+
Sbjct: 253 TVHLESLTLTGTKISSISSNLCQE-QKMLRTLDLSYNNIK--DLPSFNGCYALEEISLQR 309
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
N I + + TF G+ +L+I+DLS N I + F + L+IS N L S P +
Sbjct: 310 NQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTSFPTE 366
Score = 233 (87.1 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 83/319 (26%), Positives = 148/319 (46%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
KN LE L + N++ I +L L L + L+ N++ + + + L+ +R
Sbjct: 13 KNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIR-GL-SALQSLR 70
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N++ + D+F L +L + L N L + NL + + L+ N+I I
Sbjct: 71 LDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDF 130
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
AF NL +LV L L +NK+K + F + + +T ++LN +N + K P +
Sbjct: 131 AFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLET-LDLNYNN---LGEFPQAIKALPS-L 185
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
K L +N I +P LR ++L N + + +AF NL L L + A
Sbjct: 186 KELLFHSNSISVIPDGAFDG-NPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRG---A 241
Query: 502 VVVKR--TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
+V+R G +L+ + L+ +IS ++ LR L++S+N ++ LP F+
Sbjct: 242 SMVQRFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPS--FNGC 299
Query: 560 I-IEKLDISYNQ-DKIRPG 576
+E++ + NQ +I+ G
Sbjct: 300 YALEEISLQRNQIHQIKEG 318
Score = 208 (78.3 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 86/354 (24%), Positives = 154/354 (43%)
Query: 235 DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYI 294
D F+ LE N F + L L+ L + NN +K + + ++ L++L +
Sbjct: 10 DAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSL 69
Query: 295 NLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
L+ N I+ + + F + +L+ + L +N L + NL L +TL+ N + SI
Sbjct: 70 RLDANHITSVPEDSFE-GL-TQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSI 127
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
+F NL++++ + L N+IK + + F L NL LDL N L +F + + + K+
Sbjct: 128 PDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKE 187
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS---NNRIQEVP---------VNFLQTF 462
+ N + ++ + I++ LS N+ + + +Q F
Sbjct: 188 LLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRF 247
Query: 463 AD-----SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
+ L L L +I + + +L L L +NNI + +F G L+ I
Sbjct: 248 PNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLP--SFNGCYALEEI 305
Query: 518 DLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYNQ 570
L N+I + F LRIL++S N + + F+ I LDIS+N+
Sbjct: 306 SLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNE 359
Score = 197 (74.4 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 54/176 (30%), Positives = 91/176 (51%)
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N + + +FKN + + L+ N + +I+P A L L L LQ+N+LK
Sbjct: 2 NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIR 61
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
+++ Q+ L L N+IT++ E D + ++ L L +N + EVPV L +L+
Sbjct: 62 GLSALQS---LRLDANHITSVPE-DSFEGLTQLRHLWLDDNSLTEVPVQPLSNLP-TLQA 116
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
L L N+I + AF NL L +L L +N I + + F G+ NL+ +DL++N +
Sbjct: 117 LTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNL 172
Score = 189 (71.6 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 85/349 (24%), Positives = 150/349 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT + + F L L+ L L N L E+ LQ L ++ + +S P
Sbjct: 74 NHITSVPEDSFEGLTQLRHLWLDDNSLT--EVPVQPLSNLPTLQALTLALNKISS--IPD 129
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ NL++L L + NN IK++ + L +L ++L YN + + + L
Sbjct: 130 FAFT-NLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAI---KALPSL 185
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
KE+ +N + +I F L TI L N L + ++F NL+++ ++V+ +
Sbjct: 186 KELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ 245
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQ 436
+PN +L L L K+ ++ SN+ +Q + L+LS N I +L +
Sbjct: 246 RFPN-LTGTVHLESLTLTGTKIS----SISSNLCQEQKMLRTLDLSYNNIKDLPSFNGCY 300
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
A ++ + L N+I ++ Q SLR L L N I + AF L + L +
Sbjct: 301 A---LEEISLQRNQIHQIKEGTFQGLT-SLRILDLSRNLIHEIHDRAFAKLGSITNLDIS 356
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
N + G+ L+++ +F L + F LR L++ +
Sbjct: 357 FNELTSFPTEGLNGLNQLKLVG-NFKLKEALAAKDFV---NLRSLSVPY 401
Score = 170 (64.9 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 96/397 (24%), Positives = 153/397 (38%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L EL + G DL FI P A + LTL+ N Q++ +PS + ++ + LD +H
Sbjct: 18 LEELRLAGNDLSFIHPKALSGLKELKVLTLQ--NNQLKTVPSEAIRGLSALQSLRLDANH 75
Query: 106 ---------NKLSVLNMATLYSN------VTKLQHLGT----TILKDREKXXXXXXXXXX 146
L+ L L N V L +L T T+ ++
Sbjct: 76 ITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNL 135
Query: 147 RCNKITDLNGNLFRHLQKSIVKAKKN------NNNNEDQVSDREKXXXXXXXXXXRCNKI 200
+ L+ N + L + N N NN + K N I
Sbjct: 136 SSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSNSI 195
Query: 201 TDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYIL 260
+ + F L+ + L N L + ++ F L L I + FP L
Sbjct: 196 SVIPDGAFDGNPLLRTIHLYDNPLSFV--GNSAFHNLSDLHSLVIRGASM-VQRFPN--L 250
Query: 261 NKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEI 320
++ LE L + I +I + L ++L YN I + + FN L+EI
Sbjct: 251 TGTVH-LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPS----FNGCYALEEI 305
Query: 321 RLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L N + I+ TF L L + LS NL+ I +F L ++ N+ +SFN++ +P
Sbjct: 306 SLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTS-FP 364
Query: 381 NAFVNLPNLVKLDLQDNKLKD-FNLNVFSNITSKQTP 416
+N N +KL + + KLK+ F N+ S P
Sbjct: 365 TEGLNGLNQLKL-VGNFKLKEALAAKDFVNLRSLSVP 400
Score = 152 (58.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 55/211 (26%), Positives = 95/211 (45%)
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N I + +AF N P L +L L N L + S + K+ + L L NN + + +
Sbjct: 2 NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGL--KELKV-LTLQNNQLKTV-PS 57
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
+ + ++SL L N I VP + + LR L+LD N + + NL L+
Sbjct: 58 EAIRGLSALQSLRLDANHITSVPEDSFEGLTQ-LRHLWLDDNSLTEVPVQPLSNLPTLQA 116
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L+L N I+ + F + +L ++ L N+I L F L L++++N L P
Sbjct: 117 LTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFP 176
Query: 553 RDVFSNTIIEKLDISYNQDKIRP-GR-ESNP 581
+ + + +++L N + P G + NP
Sbjct: 177 QAIKALPSLKELLFHSNSISVIPDGAFDGNP 207
>TAIR|locus:2117617 [details] [associations]
symbol:PIRL4 "plant intracellular ras group-related LRR
4" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AL161587
EMBL:AL117188 HSSP:P07359 HOGENOM:HOG000242894
ProtClustDB:CLSN2683891 EMBL:AY072324 EMBL:AY128730 EMBL:AY849574
IPI:IPI00541009 PIR:T41744 RefSeq:NP_195272.1 UniGene:At.22486
ProteinModelPortal:Q9SVW8 SMR:Q9SVW8 IntAct:Q9SVW8 STRING:Q9SVW8
PaxDb:Q9SVW8 PRIDE:Q9SVW8 EnsemblPlants:AT4G35470.1 GeneID:829699
KEGG:ath:AT4G35470 TAIR:At4g35470 InParanoid:Q9SVW8 OMA:ILSVRYN
PhylomeDB:Q9SVW8 Genevestigator:Q9SVW8 Uniprot:Q9SVW8
Length = 549
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 88/281 (31%), Positives = 145/281 (51%)
Query: 300 KISKIH-NNLFHFNIHKRLKEIRLSNNYLELIE--SDTFYNLKELNTITLSYNLLKSIKT 356
K+S I +L + K +EI L N E +E D+ L L ++ LS N + +
Sbjct: 204 KLSLIKLASLIEVSAKKATQEINLQNKLTEQLEWLPDSLGKLSSLTSLDLSENHIVVLPN 263
Query: 357 TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTP 416
T L+++ + L N+I + P + L NLV L+L N+L + FS + +
Sbjct: 264 T-IGGLSSLTKLDLHSNRIGQL-PESIGELLNLVYLNLGSNQLSSLP-SAFSRLVRLE-- 318
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
L+LS N + L E+ + +K LD+ N I+E+P + SL +L D+N++
Sbjct: 319 -ELDLSCNNLPILPESIGSL--VSLKKLDVETNDIEEIPYSI--GGCSSLIELRADYNKL 373
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
K L A G + LE+LS+ +NNI + T + +L+ +D+SFNE+ + E F+
Sbjct: 374 KALPE-AIGKITTLEILSVRYNNIRQL-PTTMSSLASLKELDVSFNELESVP-ESLCFAT 430
Query: 537 KLRILNISHN--RLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
L LNI +N + SLPR + + ++E+LDIS NQ ++ P
Sbjct: 431 TLVKLNIGNNFADMVSLPRSIGNLEMLEELDISNNQIRVLP 471
Score = 160 (61.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 77/276 (27%), Positives = 134/276 (48%)
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES-DTFYNLKELN 342
SL L+SL ++L N I + N + + +L ++ SN +L ES NL LN
Sbjct: 241 SLGKLSSLTSLDLSENHIVVLPNTIGGLSSLTKL-DLH-SNRIGQLPESIGELLNLVYLN 298
Query: 343 TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF 402
L N L S+ + +F L + + LS N + I P + +L +L KLD++ N +++
Sbjct: 299 ---LGSNQLSSLPS-AFSRLVRLEELDLSCNNLP-ILPESIGSLVSLKKLDVETNDIEEI 353
Query: 403 NLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTF 462
++ +S + L N + L E K + I L + N I+++P + +
Sbjct: 354 PYSI-GGCSSL---IELRADYNKLKALPEAIGKITTLEI--LSVRYNNIRQLPTT-MSSL 406
Query: 463 ADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVK--RTFIGMPNLQIIDL 519
A SL++L + FNE++ + ++ F L L++ NN A +V R+ + L+ +D+
Sbjct: 407 A-SLKELDVSFNELESVPESLCFAT--TLVKLNIG-NNFADMVSLPRSIGNLEMLEELDI 462
Query: 520 SFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
S N+I +L + F KLR+ N L PRD+
Sbjct: 463 SNNQIRVLP-DSFKMLTKLRVFRAQENPLHIPPRDI 497
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 58/204 (28%), Positives = 101/204 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+++ L + F L L+EL LS N L I L ++ + L+ L++ + + E PY
Sbjct: 302 NQLSSLP-SAFSRLVRLEELDLSCNNLPI--LPESIGSLVS-LKKLDVETN--DIEEIPY 355
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
I ++L L D N +K + ++ +T+L +++ YN I ++ + L
Sbjct: 356 SI--GGCSSLIELRADYNKLKALPE-AIGKITTLEILSVRYNNIRQLPTTMSSL---ASL 409
Query: 318 KEIRLSNNYLELI-ESDTFYN-LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
KE+ +S N LE + ES F L +LN I ++ + S+ S NL + + +S NQI
Sbjct: 410 KELDVSFNELESVPESLCFATTLVKLN-IGNNFADMVSLPR-SIGNLEMLEELDISNNQI 467
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKL 399
+ + P++F L L Q+N L
Sbjct: 468 R-VLPDSFKMLTKLRVFRAQENPL 490
>UNIPROTKB|G3N2N1 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:DAAA02067944 RefSeq:XP_002699667.1
RefSeq:XP_591589.3 UniGene:Bt.78166 Ensembl:ENSBTAT00000057033
GeneID:540117 KEGG:bta:540117 NextBio:20878426 Uniprot:G3N2N1
Length = 844
Score = 173 (66.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 46/163 (28%), Positives = 84/163 (51%)
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
K+ +N+N N T + Q IY L L+ N + + N +++++ L+L
Sbjct: 38 KENVLNINCENKGFTTVSLLQPPQYRIY--QLFLNGNLLTRLYPNEFVNYSNAVT-LHLG 94
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++ + AF L L+ L L +N + V+ + TF+G+ +L+ + +N IS + F
Sbjct: 95 NNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAF 154
Query: 533 YFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
KL++L ++ N L SLP +VF ++ LD+ N+ K+ P
Sbjct: 155 SKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKLMP 197
Score = 171 (65.3 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 50/158 (31%), Positives = 79/158 (50%)
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
S +N+N TN+ +D + P K L L+ N +Q V N L ++ SL L+L
Sbjct: 350 SSDNGLNVNCQERKFTNI--SDLQPKPTSPKKLYLTGNYLQMVYKNDLLEYS-SLDLLHL 406
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N I + AF NL L L L N + V+ F G+ +LQ + L +N I +
Sbjct: 407 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMFDGLQSLQYLYLEYNVIKEIKPLT 466
Query: 532 FYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N LRSLP ++F T + +L++ N
Sbjct: 467 FDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNN 504
Score = 147 (56.8 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 55/191 (28%), Positives = 87/191 (45%)
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
LN N ++ + + K LY LT NY+ + Y N+L ++ L
Sbjct: 355 LNVNCQERKFTNISDLQPKPTSPKKLY-LTG-NYLQMVYK------NDLLEYS---SLDL 403
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L NN + +I+ F NL L + L+ N L+ + F L ++ + L +N IK I
Sbjct: 404 LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMFDGLQSLQYLYLEYNVIKEIK 463
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL-YENDKKQAP 438
P F L NL L L +N L+ N+F + LNL NN+ ++L + Q P
Sbjct: 464 PLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTR----LNLRNNHFSHLPVKGVLDQLP 519
Query: 439 IYIKSLDLSNN 449
+I+ +DL N
Sbjct: 520 AFIQ-IDLQEN 529
Score = 143 (55.4 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L ++ N + + N ++ ++L N + +I F + K LK + L+NN LE+
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFS-GL-KTLKRLHLNNNKLEV 124
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + YN + +I+ +F LN + ++L+ N + + N F L
Sbjct: 125 LREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVF-RFVLL 183
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 184 THLDLRGNRLK 194
Score = 119 (46.9 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 36/146 (24%), Positives = 74/146 (50%)
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
NEF Y N TL + NN ++ IR + L +L ++L NK+ + + F
Sbjct: 80 NEFVNY---SNAVTLH---LGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTF-LG 132
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ L+ ++ NY+ IE+ F L +L + L+ NLL S+ + F+ + + ++ L
Sbjct: 133 LES-LEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRG 190
Query: 373 NQIKYI-YPNAFVNLPNLVKLDLQDN 397
N++K + + ++ ++++ L++N
Sbjct: 191 NRLKLMPFAGVLEHIGGIMEIQLEEN 216
Score = 111 (44.1 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L N +++++ N F N + + L NN L+ I + F LK L + L+ N L+ ++
Sbjct: 69 LNGNLLTRLYPNEF-VN-YSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+F L ++ + +N I I AF L L L L DN L NVF
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVF 178
Score = 105 (42.0 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT 427
+ L+ N ++ +Y N + +L L L +N++ F+N+TS + L L+ NY+
Sbjct: 380 LYLTGNYLQMVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLR---RLYLNGNYLE 436
Query: 428 NLYEN--DKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAF 484
L+ D Q+ Y L L N I+E+ P+ F +L+ L+L+ N ++ L F
Sbjct: 437 VLFPAMFDGLQSLQY---LYLEYNVIKEIKPLTFDALI--NLQLLFLNNNLLRSLPDNIF 491
Query: 485 GNLDVLELLSLEHNNIA-VVVKRTFIGMPNLQIIDLSFN 522
G L L+L +N+ + + VK +P IDL N
Sbjct: 492 GGT-ALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQEN 529
Score = 83 (34.3 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 203 LNGNLFRHLY--------NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
LNGNL LY N L L N LQ E+ + F + L+ L + N+N+
Sbjct: 69 LNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQ--EIRTGAFSGLKTLKRLHL-----NNNK 121
Query: 255 FPYYILNKN----LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH 310
+L ++ L +LE+L D N I I + L L + L N + + +N+F
Sbjct: 122 LE--VLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
Query: 311 FNIHKRLKEIRLSNNYLELI 330
F + L + L N L+L+
Sbjct: 180 FVL---LTHLDLRGNRLKLM 196
Score = 79 (32.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
++ +L + G L + P+ F N +TL + N ++E+ +G F ++ +++ L L+
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNA--VTLHLGNNGLQEIRTGAFSGLKTLKR--LHLN 118
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNK--ITDLNGNLFRHL 162
+NKL VL T + + L++L D + NK + LN NL L
Sbjct: 119 NNKLEVLREDT-FLGLESLEYLQA----DYNYISAIEAGAFSKLNKLKVLILNDNLLLSL 173
Query: 163 QKSIVK 168
++ +
Sbjct: 174 PSNVFR 179
Score = 77 (32.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 23/104 (22%), Positives = 54/104 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + ++ F L L+ L L+ NKL++ L + F E L+ L+ ++ ++ E
Sbjct: 96 NGLQEIRTGAFSGLKTLKRLHLNNNKLEV--LREDTFLGLESLEYLQADYNYISAIEAGA 153
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
+ LN L+ L +++N + ++ + +++ L +++L N++
Sbjct: 154 F---SKLNKLKVLILNDNLLLSLPS-NVFRFVLLTHLDLRGNRL 193
>MGI|MGI:2679449 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2679449 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:84631 eggNOG:NOG147171
EMBL:AB097571 EMBL:AK044761 IPI:IPI00329847 RefSeq:NP_001154903.1
RefSeq:NP_942563.2 UniGene:Mm.336081 UniGene:Mm.403134
ProteinModelPortal:Q810C0 SMR:Q810C0 STRING:Q810C0
PhosphoSite:Q810C0 PaxDb:Q810C0 PRIDE:Q810C0
Ensembl:ENSMUST00000036043 Ensembl:ENSMUST00000166241 GeneID:245450
KEGG:mmu:245450 InParanoid:Q810C0 OrthoDB:EOG4GTKC9 NextBio:386711
Bgee:Q810C0 CleanEx:MM_SLITRK2 Genevestigator:Q810C0
GermOnline:ENSMUSG00000036790 Uniprot:Q810C0
Length = 846
Score = 173 (66.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 46/163 (28%), Positives = 84/163 (51%)
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
K+ +N+N N T + Q IY L L+ N + + N +++++ L+L
Sbjct: 38 KENVLNINCENKGFTTVSLLQPPQYRIY--QLFLNGNLLTRLYPNEFVNYSNAVT-LHLG 94
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++ + AF L L+ L L +N + V+ + TF+G+ +L+ + +N IS + F
Sbjct: 95 NNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISTIEAGAF 154
Query: 533 YFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
KL++L ++ N L SLP +VF ++ LD+ N+ K+ P
Sbjct: 155 SKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMP 197
Score = 172 (65.6 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 50/158 (31%), Positives = 79/158 (50%)
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
S +N+N TN+ +D + P K L L+ N +Q V N L ++ SL L+L
Sbjct: 351 SSDNGLNVNCQERKFTNI--SDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS-SLDLLHL 407
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N I + AF NL L L L N + V+ F G+ +LQ + L +N I +
Sbjct: 408 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLT 467
Query: 532 FYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N LRSLP ++F T + +L++ N
Sbjct: 468 FDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNN 505
Score = 147 (56.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 289 TSLNYINLEYNKISKIH-NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
TS + L N + ++ N+L ++ L + L NN + +I+ F NL L + L+
Sbjct: 376 TSPKKLYLTGNYLQTVYKNDLLEYS---SLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLN 432
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N L+ + + F L ++ + L +N IK I P F L NL L L +N L+ N+F
Sbjct: 433 GNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIF 492
Query: 408 SNITSKQTPMNLNLSNNYITNL-YENDKKQAPIYIKSLDLSNN 449
+ LNL NN+ ++L + Q P +I+ +DL N
Sbjct: 493 GGTALTR----LNLRNNHFSHLPVKGVLDQLPAFIQ-IDLQEN 530
Score = 141 (54.7 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L ++ N + + N ++ ++L N + +I F + K LK + L+NN LE+
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFS-GL-KTLKRLHLNNNKLEV 124
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + YN + +I+ +F LN + ++L+ N + + N F L
Sbjct: 125 LREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVF-RFVLL 183
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 184 THLDLRGNRLK 194
Score = 117 (46.2 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 36/146 (24%), Positives = 74/146 (50%)
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
NEF Y N TL + NN ++ IR + L +L ++L NK+ + + F
Sbjct: 80 NEFVNY---SNAVTLH---LGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTF-LG 132
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ L+ ++ NY+ IE+ F L +L + L+ NLL S+ + F+ + + ++ L
Sbjct: 133 LES-LEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRG 190
Query: 373 NQIKYI-YPNAFVNLPNLVKLDLQDN 397
N++K + + ++ ++++ L++N
Sbjct: 191 NRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 111 (44.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 46/159 (28%), Positives = 78/159 (49%)
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT 427
+ L+ N ++ +Y N + +L L L +N++ F+N+TS + L L+ NY+
Sbjct: 381 LYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLR---RLYLNGNYLE 437
Query: 428 NLYEN--DKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAF 484
LY + D Q+ Y L L N I+E+ P+ F +L+ L+L+ N ++ L F
Sbjct: 438 VLYPSMFDGLQSLQY---LYLEYNVIKEIKPLTFDALI--NLQLLFLNNNLLRSLPDNIF 492
Query: 485 GNLDVLELLSLEHNNIA-VVVKRTFIGMPNLQIIDLSFN 522
G L L+L +N+ + + VK +P IDL N
Sbjct: 493 GGT-ALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQEN 530
Score = 109 (43.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L N +++++ N F N + + L NN L+ I F LK L + L+ N L+ ++
Sbjct: 69 LNGNLLTRLYPNEF-VN-YSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+F L ++ + +N I I AF L L L L DN L NVF
Sbjct: 127 EDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVF 178
Score = 80 (33.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 39/140 (27%), Positives = 61/140 (43%)
Query: 203 LNGNLFRHLY--------NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
LNGNL LY N L L N LQ E+ F + L+ L + N+N+
Sbjct: 69 LNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQ--EIRPGAFSGLKTLKRLHL-----NNNK 121
Query: 255 FPYYILNKN----LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH 310
+L ++ L +LE+L D N I I + L L + L N + + +N+F
Sbjct: 122 LE--VLREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
Query: 311 FNIHKRLKEIRLSNNYLELI 330
F + L + L N L+++
Sbjct: 180 FVL---LTHLDLRGNRLKVM 196
Score = 78 (32.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + ++ F L L+ L L+ NKL++ L + F E L+ L+ ++ ++ E
Sbjct: 96 NGLQEIRPGAFSGLKTLKRLHLNNNKLEV--LREDTFLGLESLEYLQADYNYISTIEAGA 153
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN--KISKIHNNLFHFNIHK 315
+ LN L+ L +++N + ++ + +++ L +++L N K+ L H
Sbjct: 154 F---SKLNKLKVLILNDNLLLSLPS-NVFRFVLLTHLDLRGNRLKVMPFAGVLEHIG--- 206
Query: 316 RLKEIRLSNN 325
+ EI+L N
Sbjct: 207 GIMEIQLEEN 216
Score = 77 (32.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
++ +L + G L + P+ F N +TL + N ++E+ G F ++ +++ L L+
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNA--VTLHLGNNGLQEIRPGAFSGLKTLKR--LHLN 118
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNK--ITDLNGNLFRHL 162
+NKL VL T + + L++L D + NK + LN NL L
Sbjct: 119 NNKLEVLREDT-FLGLESLEYLQA----DYNYISTIEAGAFSKLNKLKVLILNDNLLLSL 173
Query: 163 QKSIVK 168
++ +
Sbjct: 174 PSNVFR 179
>UNIPROTKB|F1SH46 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:IAPYQTR
EMBL:CU466936 Ensembl:ENSSSCT00000012847 Uniprot:F1SH46
Length = 979
Score = 160 (61.4 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 46/156 (29%), Positives = 81/156 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N+++ + S +L + INL N + I F N K LK + L N L++
Sbjct: 83 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAF--NGLKILKRLYLHENKLDV 140
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++TF L+ L + YN++K I++ +F+NL+ + ++L+ N I + N F + +L
Sbjct: 141 FRNETFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAV-SL 199
Query: 390 VKLDLQDNKLKD-FNLNVFSNITSKQTPMNLNLSNN 424
LDL+ N+LK F + +I ++ M L L N
Sbjct: 200 THLDLRGNRLKVLFYRGMLDHIG--RSLMELQLEEN 233
Score = 155 (59.6 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ K L LS+N IQ++ + F+ SL L+L N I ++ AF NL L+ L L
Sbjct: 408 PLNAKKLYLSSNLIQKIYRSDFWNFS-SLDLLHLGNNRISYVQDGAFINLPNLKSLFLNG 466
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N+I + F G+ +L + FN I + F L++L +++N LR+LP D F+
Sbjct: 467 NDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFA 526
Query: 558 NTIIEKLDISYN 569
T + +L++ N
Sbjct: 527 GTSLARLNLRKN 538
Score = 142 (55.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
NNI + L N L Y L N I KI+ + F +N L + L NN + ++
Sbjct: 399 NNISELLPRPL-NAKKL-Y--LSSNLIQKIYRSDF-WNFSS-LDLLHLGNNRISYVQDGA 452
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F NL L ++ L+ N ++ + F+ L ++ + FN I+ I P AF +PNL L L
Sbjct: 453 FINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFL 512
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
+N L+ + F+ TS LNL NY L + I +DL+ N
Sbjct: 513 NNNLLRTLPTDAFAG-TSLA---RLNLRKNYFLYLPVAGVLEHLNAIVQIDLNEN 563
Score = 135 (52.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 36/139 (25%), Positives = 76/139 (54%)
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+L + LN + L + +N I+ I +N +SL+ ++L N+IS + + F N+ LK
Sbjct: 404 LLPRPLNAKK-LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAF-INL-PNLK 460
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ L+ N +E + F L+ L+ + +N+++ I+ +F + N+ + L+ N ++ +
Sbjct: 461 SLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTL 520
Query: 379 YPNAFVNLPNLVKLDLQDN 397
+AF +L +L+L+ N
Sbjct: 521 PTDAFAGT-SLARLNLRKN 538
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 444 LDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L L N ++++ N FL ++ + L N ++ + AF L +L+ L L N + V
Sbjct: 83 LYLQRNSMRKLYTNSFLHL--NNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDV 140
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
TF+G+ +L+ + +N I + F KLR+L ++ N + LP ++F +
Sbjct: 141 FRNETFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVSLT 200
Query: 563 KLDISYNQDKI 573
LD+ N+ K+
Sbjct: 201 HLDLRGNRLKV 211
Score = 115 (45.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N + L N F HL N ++L N LQ I+ + N + ++L L E +F + F
Sbjct: 88 NSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNETF- 146
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
L +LE+L D N IK I + + NL+ L + L N I + NLF
Sbjct: 147 -----LGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLF 194
Score = 53 (23.7 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 73 LTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT--TI 130
+++ + N ++++ +G F+ ++ +++ L L NKL V T + + L++L +
Sbjct: 105 VSINLGNNALQDIQTGAFNGLKILKR--LYLHENKLDVFRNET-FLGLESLEYLQADYNV 161
Query: 131 LKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
+K E ++ LN NL L ++ KA
Sbjct: 162 IKRIESGAFRNLSKL----RVLILNDNLIPMLPTNLFKA 196
>RGD|1561361 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1561361 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:LQADYNY OrthoDB:EOG4GTKC9
IPI:IPI00361290 Ensembl:ENSRNOT00000015401 Uniprot:D3ZK41
Length = 846
Score = 173 (66.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 46/163 (28%), Positives = 84/163 (51%)
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
K+ +N+N N T + Q IY L L+ N + + N +++++ L+L
Sbjct: 38 KENVLNINCENKGFTTVSLLQPPQYRIY--QLFLNGNLLTRLYPNEFVNYSNAVT-LHLG 94
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++ + AF L L+ L L +N + V+ + TF+G+ +L+ + +N IS + F
Sbjct: 95 NNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISTIEAGAF 154
Query: 533 YFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
KL++L ++ N L SLP +VF ++ LD+ N+ K+ P
Sbjct: 155 SKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMP 197
Score = 171 (65.3 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 50/158 (31%), Positives = 78/158 (49%)
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
S +N+N TN+ +D + P K L L+ N +Q V N L + SL L+L
Sbjct: 351 SSDNGLNVNCQERKFTNI--SDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYT-SLDLLHL 407
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N I + AF NL L L L N + V+ F G+ +LQ + L +N I +
Sbjct: 408 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLT 467
Query: 532 FYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N LRSLP ++F T + +L++ N
Sbjct: 468 FDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNN 505
Score = 146 (56.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 289 TSLNYINLEYNKISKIH-NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
TS + L N + ++ N+L + L + L NN + +I+ F NL L + L+
Sbjct: 376 TSPKKLYLTGNYLQTVYKNDLLEYT---SLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLN 432
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N L+ + + F L ++ + L +N IK I P F L NL L L +N L+ N+F
Sbjct: 433 GNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIF 492
Query: 408 SNITSKQTPMNLNLSNNYITNL-YENDKKQAPIYIKSLDLSNN 449
+ LNL NN+ ++L + Q P +I+ +DL N
Sbjct: 493 GGTALTR----LNLRNNHFSHLPVKGVLDQLPAFIQ-IDLQEN 530
Score = 141 (54.7 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L ++ N + + N ++ ++L N + +I F + K LK + L+NN LE+
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFS-GL-KTLKRLHLNNNKLEV 124
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + YN + +I+ +F LN + ++L+ N + + N F L
Sbjct: 125 LREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVF-RFVLL 183
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 184 THLDLRGNRLK 194
Score = 117 (46.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 36/146 (24%), Positives = 74/146 (50%)
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
NEF Y N TL + NN ++ IR + L +L ++L NK+ + + F
Sbjct: 80 NEFVNY---SNAVTLH---LGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTF-LG 132
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ L+ ++ NY+ IE+ F L +L + L+ NLL S+ + F+ + + ++ L
Sbjct: 133 LES-LEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVL-LTHLDLRG 190
Query: 373 NQIKYI-YPNAFVNLPNLVKLDLQDN 397
N++K + + ++ ++++ L++N
Sbjct: 191 NRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 111 (44.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 46/159 (28%), Positives = 78/159 (49%)
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT 427
+ L+ N ++ +Y N + +L L L +N++ F+N+TS + L L+ NY+
Sbjct: 381 LYLTGNYLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLR---RLYLNGNYLE 437
Query: 428 NLYEN--DKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAF 484
LY + D Q+ Y L L N I+E+ P+ F +L+ L+L+ N ++ L F
Sbjct: 438 VLYPSMFDGLQSLQY---LYLEYNVIKEIKPLTFDALI--NLQLLFLNNNLLRSLPDNIF 492
Query: 485 GNLDVLELLSLEHNNIA-VVVKRTFIGMPNLQIIDLSFN 522
G L L+L +N+ + + VK +P IDL N
Sbjct: 493 GGT-ALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQEN 530
Score = 109 (43.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L N +++++ N F N + + L NN L+ I F LK L + L+ N L+ ++
Sbjct: 69 LNGNLLTRLYPNEF-VN-YSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+F L ++ + +N I I AF L L L L DN L NVF
Sbjct: 127 EDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVF 178
Score = 80 (33.2 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 39/140 (27%), Positives = 61/140 (43%)
Query: 203 LNGNLFRHLY--------NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
LNGNL LY N L L N LQ E+ F + L+ L + N+N+
Sbjct: 69 LNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQ--EIRPGAFSGLKTLKRLHL-----NNNK 121
Query: 255 FPYYILNKN----LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH 310
+L ++ L +LE+L D N I I + L L + L N + + +N+F
Sbjct: 122 LE--VLREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
Query: 311 FNIHKRLKEIRLSNNYLELI 330
F + L + L N L+++
Sbjct: 180 FVL---LTHLDLRGNRLKVM 196
Score = 78 (32.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + ++ F L L+ L L+ NKL++ L + F E L+ L+ ++ ++ E
Sbjct: 96 NGLQEIRPGAFSGLKTLKRLHLNNNKLEV--LREDTFLGLESLEYLQADYNYISTIEAGA 153
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN--KISKIHNNLFHFNIHK 315
+ LN L+ L +++N + ++ + +++ L +++L N K+ L H
Sbjct: 154 F---SKLNKLKVLILNDNLLLSLPS-NVFRFVLLTHLDLRGNRLKVMPFAGVLEHIG--- 206
Query: 316 RLKEIRLSNN 325
+ EI+L N
Sbjct: 207 GIMEIQLEEN 216
Score = 77 (32.2 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
++ +L + G L + P+ F N +TL + N ++E+ G F ++ +++ L L+
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNA--VTLHLGNNGLQEIRPGAFSGLKTLKR--LHLN 118
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNK--ITDLNGNLFRHL 162
+NKL VL T + + L++L D + NK + LN NL L
Sbjct: 119 NNKLEVLREDT-FLGLESLEYLQA----DYNYISTIEAGAFSKLNKLKVLILNDNLLLSL 173
Query: 163 QKSIVK 168
++ +
Sbjct: 174 PSNVFR 179
>UNIPROTKB|F1NZH0 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:NGLPCPG GeneTree:ENSGT00680000099775
EMBL:AADN02029556 IPI:IPI00578668 ProteinModelPortal:F1NZH0
Ensembl:ENSGALT00000027326 Uniprot:F1NZH0
Length = 710
Score = 170 (64.9 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 45/153 (29%), Positives = 79/153 (51%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+ +N ++ +++L D K P ++ L L +N+I + + + L L L N I
Sbjct: 371 LKVNCNDRNVSSLV--DLKPKPSNVQELFLRDNKIHTIRKSHFLDYR-KLNLLDLGNNNI 427
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
++ F NL L L ++ N + + + F G+ NL+ +++ FN I ++ F
Sbjct: 428 ATVENNTFKNLFDLRWLYMDSNYLDTLSREKFTGLQNLEYLNVEFNGIQLIMPGTFNAMP 487
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
KLR+L +++N LRSLP DVF+ + KL I N
Sbjct: 488 KLRVLILNNNLLRSLPVDVFAGVSLSKLSIHNN 520
Score = 167 (63.8 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 55/199 (27%), Positives = 96/199 (48%)
Query: 274 NNNIKNIRNYSLYNL----TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
N N +N+ SL +L +++ + L NKI I + HF +++L + L NN +
Sbjct: 374 NCNDRNVS--SLVDLKPKPSNVQELFLRDNKIHTIRKS--HFLDYRKLNLLDLGNNNIAT 429
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+E++TF NL +L + + N L ++ F L N+ + + FN I+ I P F +P L
Sbjct: 430 VENNTFKNLFDLRWLYMDSNYLDTLSREKFTGLQNLEYLNVEFNGIQLIMPGTFNAMPKL 489
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L L +N L+ ++VF+ ++ + L++ NNY L I +DL N
Sbjct: 490 RVLILNNNLLRSLPVDVFAGVSLSK----LSIHNNYFMYLPVAGVLDQLTSITQIDLHGN 545
Query: 450 RIQ-EVPVNFLQTFADSLR 467
P+ + +A+ LR
Sbjct: 546 PWDCTCPIVPFKQWAEMLR 564
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 57/220 (25%), Positives = 97/220 (44%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI---SFSLFNSNEFPYYILNKNLNTLEW 269
N+QEL L NK+ I S+ D + KL LL++ + + +N F KNL L W
Sbjct: 392 NVQELFLRDNKIHTIR-KSHFLD-YRKLNLLDLGNNNIATVENNTF------KNLFDLRW 443
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L MD+N + + L +L Y+N+E+N I I F N +L+ + L+NN L
Sbjct: 444 LYMDSNYLDTLSREKFTGLQNLEYLNVEFNGIQLIMPGTF--NAMPKLRVLILNNNLLRS 501
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVLSFNQIKYIYP----NAFV 384
+ D F + L+ +++ N + L ++ I L N P +
Sbjct: 502 LPVDVFAGVS-LSKLSIHNNYFMYLPVAGVLDQLTSITQIDLHGNPWDCTCPIVPFKQWA 560
Query: 385 NL--PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+ P ++ DL+ +DF F ++++ L +S
Sbjct: 561 EMLRPKVIMSDLRCESPEDFFKEDFESLSNDVICPQLKIS 600
Score = 139 (54.0 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 35/117 (29%), Positives = 64/117 (54%)
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343
+ YN SL+ +E N + +I F + + +K + ++NN ++ TF L +L
Sbjct: 98 NFYNAVSLH---MENNGLHEIVPGAF-LGL-QLVKRLHINNNKIKSFRKQTFLGLDDLEY 152
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
+ +NLL+ I +F++LN + ++L+ N I + PN F +P + LDL+ N+LK
Sbjct: 153 LQADFNLLRDIDPGAFRDLNKLEVLILNDNLISTLPPNVFQYVP-ITHLDLRGNRLK 208
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + + N F +++ L+++ N + + AF L +++ L + +N I
Sbjct: 81 LFLHGNSLTRLFPNEFANFYNAV-SLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSF 139
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
K+TF+G+ +L+ + FN + + F KL +L ++ N + +LP +VF I
Sbjct: 140 RKQTFLGLDDLEYLQADFNLLRDIDPGAFRDLNKLEVLILNDNLISTLPPNVFQYVPITH 199
Query: 564 LDISYNQDKIRPGRE 578
LD+ N+ K P E
Sbjct: 200 LDLRGNRLKTLPYEE 214
Score = 124 (48.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 31/133 (23%), Positives = 69/133 (51%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
+ ++ L + +N I IR + LN ++L N I+ + NN F N+ L+ + + +
Sbjct: 391 SNVQELFLRDNKIHTIRKSHFLDYRKLNLLDLGNNNIATVENNTFK-NLFD-LRWLYMDS 448
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
NYL+ + + F L+ L + + +N ++ I +F + + ++L+ N ++ + + F
Sbjct: 449 NYLDTLSREKFTGLQNLEYLNVEFNGIQLIMPGTFNAMPKLRVLILNNNLLRSLPVDVFA 508
Query: 385 NLPNLVKLDLQDN 397
+ +L KL + +N
Sbjct: 509 GV-SLSKLSIHNN 520
Score = 120 (47.3 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 40/148 (27%), Positives = 72/148 (48%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N ++++ N F N + + + + NN L I F L+ + + ++ N +K
Sbjct: 80 HLFLHGNSLTRLFPNEFA-NFYNAVS-LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIK 137
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
S + +F L+++ + FN ++ I P AF +L L L L DN + NVF +
Sbjct: 138 SFRKQTFLGLDDLEYLQADFNLLRDIDPGAFRDLNKLEVLILNDNLISTLPPNVFQYV-- 195
Query: 413 KQTPM-NLNLSNNYITNL-YENDKKQAP 438
P+ +L+L N + L YE +Q P
Sbjct: 196 ---PITHLDLRGNRLKTLPYEEVLEQIP 220
Score = 94 (38.1 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L M+NN + I + L + +++ NKI F + L+ ++ N L
Sbjct: 105 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTF-LGLDD-LEYLQADFNLLRD 162
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFVNLPN 388
I+ F +L +L + L+ NL+ ++ F+ + + ++ L N++K + Y +P
Sbjct: 163 IDPGAFRDLNKLEVLILNDNLISTLPPNVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 221
Query: 389 LVKLDLQDN 397
+ ++ L+DN
Sbjct: 222 IAEILLEDN 230
Score = 79 (32.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 22/91 (24%), Positives = 47/91 (51%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L ++ L ++NN IK+ R + L L Y+ ++N + I F +++K L+ + L+
Sbjct: 123 LQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFR-DLNK-LEVLILN 180
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+N + + + F + + + L N LK++
Sbjct: 181 DNLISTLPPNVFQYVP-ITHLDLRGNRLKTL 210
Score = 57 (25.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 20/107 (18%), Positives = 51/107 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + ++ F L ++ L ++ NK++ F + L+ L+ F+L +
Sbjct: 110 NGLHEIVPGAFLGLQLVKRLHINNNKIK--SFRKQTFLGLDDLEYLQADFNLLRDIDPGA 167
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI 304
+ ++LN LE L +++N I + +++ + +++L N++ +
Sbjct: 168 F---RDLNKLEVLILNDNLISTLPP-NVFQYVPITHLDLRGNRLKTL 210
Score = 56 (24.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T L N F + ++ +NN +E V NKI F
Sbjct: 86 NSLTRLFPNEFANFYNAVSLHMENNGLHEI-VPGAFLGLQLVKRLHINNNKIKSFRKQTF 144
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS---NEFPY 257
L +L+ L FN L+ +++ F KL++L ++ +L ++ N F Y
Sbjct: 145 LGLDDLEYLQADFNLLR--DIDPGAFRDLNKLEVLILNDNLISTLPPNVFQY 194
>UNIPROTKB|F1NEZ4 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:LQADYNY
EMBL:AADN02073144 IPI:IPI00582200 Ensembl:ENSGALT00000014971
Uniprot:F1NEZ4
Length = 831
Score = 171 (65.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 45/163 (27%), Positives = 85/163 (52%)
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
K+ +N+N N T + + IY L L+ N + + N +++++ L+L
Sbjct: 13 KENVLNINCENKGFTTISLLLPPPSKIY--QLFLNGNALTRLFPNEFVNYSNAVT-LHLG 69
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N+++ + AF L L+ L L +N + V+ + TF+G+ +L+ + +N IS + F
Sbjct: 70 NNDMQEIHTGAFSGLRTLKRLHLNNNKLEVLKEDTFLGLESLEYLQADYNYISAIEAGAF 129
Query: 533 YFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
KL++L ++ N L SLP +VF ++ LD+ N+ K+ P
Sbjct: 130 NKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKMMP 172
Score = 162 (62.1 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 50/161 (31%), Positives = 79/161 (49%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+N+N I+N+ E K P K L L++N +Q + L ++ SL L+L N I
Sbjct: 333 LNVNCQEKKISNISELHPK--PTTPKKLYLTSNYLQVIYRTDLAEYS-SLDLLHLGNNRI 389
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
+ AF NL L L L N + ++ F G+ +LQ + L +N I + F
Sbjct: 390 AVIQEGAFTNLTSLRRLYLNGNYLEILYPSMFDGLQSLQYLYLEYNVIKEILPHTFDTLS 449
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGR 577
L +L +++N LRSLP +VF T + +L++ N P R
Sbjct: 450 NLHLLFLNNNLLRSLPDNVFGGTSLTRLNLRNNHFSHLPVR 490
Score = 159 (61.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 53/187 (28%), Positives = 90/187 (48%)
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
+L N + ++ Q+ K+ N+ TP L L++NY+ +Y D + + L
Sbjct: 328 SLDNGLNVNCQEKKIS----NISELHPKPTTPKKLYLTSNYLQVIYRTDLAEYSS-LDLL 382
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
L NNRI + T SLR+LYL+ N ++ L + F L L+ L LE+N I ++
Sbjct: 383 HLGNNRIAVIQEGAF-TNLTSLRRLYLNGNYLEILYPSMFDGLQSLQYLYLEYNVIKEIL 441
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP-RDVFSN-TIIE 562
TF + NL ++ L+ N + L + + L LN+ +N LP R V + +
Sbjct: 442 PHTFDTLSNLHLLFLNNNLLRSLP-DNVFGGTSLTRLNLRNNHFSHLPVRGVLDRLSALI 500
Query: 563 KLDISYN 569
++D+ N
Sbjct: 501 QIDLQEN 507
Score = 149 (57.5 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 37/131 (28%), Positives = 68/131 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L ++ N + + N ++ ++L N + +IH F + + LK + L+NN LE+
Sbjct: 42 LFLNGNALTRLFPNEFVNYSNAVTLHLGNNDMQEIHTGAFS-GL-RTLKRLHLNNNKLEV 99
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++ DTF L+ L + YN + +I+ +F LN + ++L+ N + + N F L
Sbjct: 100 LKEDTFLGLESLEYLQADYNYISAIEAGAFNKLNKLKVLILNDNLLLSLPSNVF-RFVLL 158
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 159 THLDLRGNRLK 169
Score = 142 (55.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 47/164 (28%), Positives = 78/164 (47%)
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNL---FHFNI--HKRLKEIRLSNN 325
++DN N + + N++ L+ K+ N L + ++ + L + L NN
Sbjct: 328 SLDNGLNVNCQEKKISNISELHPKPTTPKKLYLTSNYLQVIYRTDLAEYSSLDLLHLGNN 387
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
+ +I+ F NL L + L+ N L+ + + F L ++ + L +N IK I P+ F
Sbjct: 388 RIAVIQEGAFTNLTSLRRLYLNGNYLEILYPSMFDGLQSLQYLYLEYNVIKEILPHTFDT 447
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L NL L L +N L+ NVF TS LNL NN+ ++L
Sbjct: 448 LSNLHLLFLNNNLLRSLPDNVFGG-TSLT---RLNLRNNHFSHL 487
Score = 138 (53.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
L+ T + L + +N ++ I L +SL+ ++L N+I+ I F N+ L+
Sbjct: 348 LHPKPTTPKKLYLTSNYLQVIYRTDLAEYSSLDLLHLGNNRIAVIQEGAFT-NLTS-LRR 405
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L+ NYLE++ F L+ L + L YN++K I +F L+N+ + L+ N ++ +
Sbjct: 406 LYLNGNYLEILYPSMFDGLQSLQYLYLEYNVIKEILPHTFDTLSNLHLLFLNNNLLRSLP 465
Query: 380 PNAFVNLPNLVKLDLQDN 397
N F +L +L+L++N
Sbjct: 466 DNVFGGT-SLTRLNLRNN 482
Score = 115 (45.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 35/155 (22%), Positives = 77/155 (49%)
Query: 247 FSLF-NSNEFPYYILNK--NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISK 303
+ LF N N N+ N + L + NN+++ I + L +L ++L NK+
Sbjct: 40 YQLFLNGNALTRLFPNEFVNYSNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNNNKLEV 99
Query: 304 IHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
+ + F + L+ ++ NY+ IE+ F L +L + L+ NLL S+ + F+ +
Sbjct: 100 LKEDTF-LGLES-LEYLQADYNYISAIEAGAFNKLNKLKVLILNDNLLLSLPSNVFRFVL 157
Query: 364 NMLNIVLSFNQIKYI-YPNAFVNLPNLVKLDLQDN 397
+ ++ L N++K + + ++ ++++ L++N
Sbjct: 158 -LTHLDLRGNRLKMMPFAGVLEHIGGIMEIQLEEN 191
Score = 106 (42.4 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 33/112 (29%), Positives = 52/112 (46%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L N ++++ N F N + + L NN ++ I + F L+ L + L+ N L+ +K
Sbjct: 44 LNGNALTRLFPNEF-VN-YSNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNNNKLEVLK 101
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+F L ++ + +N I I AF L L L L DN L NVF
Sbjct: 102 EDTFLGLESLEYLQADYNYISAIEAGAFNKLNKLKVLILNDNLLLSLPSNVF 153
Score = 93 (37.8 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 29/107 (27%), Positives = 57/107 (53%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I + F +L +L+ L L+ N L+I L ++FD + LQ L + +++ P+
Sbjct: 387 NRIAVIQEGAFTNLTSLRRLYLNGNYLEI--LYPSMFDGLQSLQYLYLEYNVIKEI-LPH 443
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI 304
L+ L L ++NN ++++ + +++ TSL +NL N S +
Sbjct: 444 TF--DTLSNLHLLFLNNNLLRSLPD-NVFGGTSLTRLNLRNNHFSHL 487
Score = 87 (35.7 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 32/127 (25%), Positives = 58/127 (45%)
Query: 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL 103
SK+ +L + G L + P+ F N +TL + N ++E+ +G F + +++ L L
Sbjct: 37 SKIYQLFLNGNALTRLFPNEFVNYSNA--VTLHLGNNDMQEIHTGAFSGLRTLKR--LHL 92
Query: 104 SHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNK--ITDLNGNLFRH 161
++NKL VL T + + L++L D + NK + LN NL
Sbjct: 93 NNNKLEVLKEDT-FLGLESLEYLQA----DYNYISAIEAGAFNKLNKLKVLILNDNLLLS 147
Query: 162 LQKSIVK 168
L ++ +
Sbjct: 148 LPSNVFR 154
Score = 82 (33.9 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 25/104 (24%), Positives = 57/104 (54%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + +++ F L L+ L L+ NKL++ L + F E L+ L+ ++ ++ E
Sbjct: 71 NDMQEIHTGAFSGLRTLKRLHLNNNKLEV--LKEDTFLGLESLEYLQADYNYISAIEAGA 128
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
+ NK LN L+ L +++N + ++ + +++ L +++L N++
Sbjct: 129 F--NK-LNKLKVLILNDNLLLSLPS-NVFRFVLLTHLDLRGNRL 168
>UNIPROTKB|Q9H5Y7 [details] [associations]
symbol:SLITRK6 "SLIT and NTRK-like protein 6" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 EMBL:CH471093
HOGENOM:HOG000290667 HOVERGEN:HBG056407 EMBL:AK021931 EMBL:AK026427
EMBL:AK292793 EMBL:AL137517 EMBL:BX648640 EMBL:AL162373
EMBL:BC101070 EMBL:BC101071 EMBL:BC101072 EMBL:BC101073
IPI:IPI00176398 PIR:T46279 RefSeq:NP_115605.2 UniGene:Hs.525105
ProteinModelPortal:Q9H5Y7 SMR:Q9H5Y7 STRING:Q9H5Y7
PhosphoSite:Q9H5Y7 DMDM:59803110 PaxDb:Q9H5Y7 PRIDE:Q9H5Y7
DNASU:84189 Ensembl:ENST00000400286 GeneID:84189 KEGG:hsa:84189
UCSC:uc001vll.1 CTD:84189 GeneCards:GC13M086366 HGNC:HGNC:23503
HPA:HPA014491 MIM:609681 neXtProt:NX_Q9H5Y7 PharmGKB:PA134928433
eggNOG:NOG113965 InParanoid:Q9H5Y7 OMA:YFELKAN OrthoDB:EOG4X0MRT
PhylomeDB:Q9H5Y7 GenomeRNAi:84189 NextBio:73578 Bgee:Q9H5Y7
CleanEx:HS_SLITRK6 Genevestigator:Q9H5Y7 GermOnline:ENSG00000184564
Uniprot:Q9H5Y7
Length = 841
Score = 164 (62.8 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 40/131 (30%), Positives = 74/131 (56%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ NN + + LT+ I+L +N I+ I + FN LK++ +++N LE+
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAISIHLGFNNIADIE--IGAFNGLGLLKQLHINHNSLEI 126
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++ DTF+ L+ L + N + I+ ++F LN + ++L+ N I+ + PN F +P L
Sbjct: 127 LKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-L 185
Query: 390 VKLDLQDNKLK 400
LDL+ N+L+
Sbjct: 186 THLDLRGNQLQ 196
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 36/132 (27%), Positives = 70/132 (53%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L NN + + N +++ ++L FN I ++ AF L +L+ L + HN++ ++
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAI-SIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEIL 127
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
+ TF G+ NL+ + N I+++ F +L++L ++ N + SLP ++F +
Sbjct: 128 KEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVPLTH 187
Query: 564 LDISYNQDKIRP 575
LD+ NQ + P
Sbjct: 188 LDLRGNQLQTLP 199
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 108/432 (25%), Positives = 182/432 (42%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNN-EDQVSDREKXXXXXXXXXXRCNKITDLNGNL 207
N I D+ F L ++K N+N+ E D N IT + +
Sbjct: 98 NNIADIEIGAFNGL--GLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSA 155
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
F L L+ L L+ N ++ L N+F F L L++ + + PY +++ +
Sbjct: 156 FSKLNRLKVLILNDNAIE--SLPPNIFR-FVPLTHLDLRGNQLQT--LPYVGFLEHIGRI 210
Query: 268 EWLAMDNNNIKNIRNYSLYNL-TSLNYINLEYNKI--SKIHNN--LFHFNIHKRLKEIRL 322
L +++N K N L L T L N+ I + N+ F +I RLK+ +
Sbjct: 211 LDLQLEDN--KWACNCDLLQLKTWLE--NMPPQSIIGDVVCNSPPFFKGSILSRLKKESI 266
Query: 323 SNN---YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNML-NIVLSFNQIKYI 378
Y E D +L T +++ + + S KTTS L ++ +
Sbjct: 267 CPTPPVYEE--HEDPSGSLHLAATSSINDSRM-STKTTSILKLPTKAPGLIPYITKPSTQ 323
Query: 379 YPNAFVNLPNLVKLDLQDNKL---KDFNLNVFSNITSK-QTPMNLNLSNNYITNLYENDK 434
P + +P K+ L ++ N+ S++ Q P L L+ N I +L ++D
Sbjct: 324 LPGPYCPIPCNCKVLSPSGLLIHCQERNIESLSDLRPPPQNPRKLILAGNIIHSLMKSDL 383
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
+ ++ L L NNRI+ + L+KLYL+ N + L F L LE L
Sbjct: 384 VEY-FTLEMLHLGNNRIEVLEEGSFMNLT-RLQKLYLNGNHLTKLSKGMFLGLHNLEYLY 441
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
LE+N I ++ TF MP L+++ L+ N + +L + L +N+ N+ LP
Sbjct: 442 LEYNAIKEILPGTFNPMPKLKVLYLNNNLLQVLP-PHIFSGVPLTKVNLKTNQFTHLP-- 498
Query: 555 VFSNTIIEKLDI 566
SN I++ LD+
Sbjct: 499 -VSN-ILDDLDL 508
Score = 147 (56.8 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 41/139 (29%), Positives = 74/139 (53%)
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+D + P + L L+ N I + + L + +L L+L N I+ L+ +F NL L+
Sbjct: 356 SDLRPPPQNPRKLILAGNIIHSLMKSDLVEYF-TLEMLHLGNNRIEVLEEGSFMNLTRLQ 414
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N++ + K F+G+ NL+ + L +N I + F KL++L +++N L+ L
Sbjct: 415 KLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNAIKEILPGTFNPMPKLKVLYLNNNLLQVL 474
Query: 552 PRDVFSNTIIEKLDISYNQ 570
P +FS + K+++ NQ
Sbjct: 475 PPHIFSGVPLTKVNLKTNQ 493
Score = 145 (56.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 40/134 (29%), Positives = 67/134 (50%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + L NN +E++E +F NL L + L+ N L + F L+N+ + L +N IK
Sbjct: 389 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNAIK 448
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKK 435
I P F +P L L L +N L+ ++FS + P+ +NL N T+L ++
Sbjct: 449 EILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGV-----PLTKVNLKTNQFTHLPVSNIL 503
Query: 436 QAPIYIKSLDLSNN 449
+ +DL +N
Sbjct: 504 DDLDLLTQIDLEDN 517
Score = 141 (54.7 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 45/157 (28%), Positives = 75/157 (47%)
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
P L+L NN +T L+ ND I S+ L N I ++ + L++L+++ N
Sbjct: 66 PFQLSLLNNGLTMLHTNDFSGLTNAI-SIHLGFNNIADIEIGAFNGLG-LLKQLHINHNS 123
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
++ L F L+ LE L ++N I V+ F + L+++ L+ N I L F F
Sbjct: 124 LEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRF- 182
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572
L L++ N+L++LP F I LD+ +K
Sbjct: 183 VPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 219
Score = 132 (51.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
TLE L + NN I+ + S NLT L + L N ++K+ +F +H L+ + L N
Sbjct: 388 TLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMF-LGLHN-LEYLYLEYN 445
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFV 384
++ I TF + +L + L+ NLL+ + F + + + L NQ ++ N
Sbjct: 446 AIKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTKVNLKTNQFTHLPVSNILD 504
Query: 385 NLPNLVKLDLQDN 397
+L L ++DL+DN
Sbjct: 505 DLDLLTQIDLEDN 517
Score = 106 (42.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L N ++ +H N F + + I L N + IE F L L + +++N L+
Sbjct: 69 LSLLNNGLTMLHTNDFS-GLTNAIS-IHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEI 126
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+K +F L N+ + N I I P+AF L L L L DN ++ N+F +
Sbjct: 127 LKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFV--- 183
Query: 414 QTPM-NLNLSNNYITNL 429
P+ +L+L N + L
Sbjct: 184 --PLTHLDLRGNQLQTL 198
Score = 99 (39.9 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 37/134 (27%), Positives = 57/134 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N +T L+ N F L N + L FN + IE+ + N + ++L + S + + F
Sbjct: 74 NGLTMLHTNDFSGLTNAISIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILKEDTF- 132
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L LE+L DNN I I + L L + L N I + N+F F
Sbjct: 133 -----HGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRF---VP 184
Query: 317 LKEIRLSNNYLELI 330
L + L N L+ +
Sbjct: 185 LTHLDLRGNQLQTL 198
Score = 99 (39.9 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 38/160 (23%), Positives = 78/160 (48%)
Query: 318 KEIRLSNNYLE-LIESDT--FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
+++ L+ N + L++SD ++ L+ L+ L N ++ ++ SF NL + + L+ N
Sbjct: 366 RKLILAGNIIHSLMKSDLVEYFTLEMLH---LGNNRIEVLEEGSFMNLTRLQKLYLNGNH 422
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
+ + F+ L NL L L+ N +K+ F+ + + L L+NN + L +
Sbjct: 423 LTKLSKGMFLGLHNLEYLYLEYNAIKEILPGTFNPMPKLKV---LYLNNNLLQVLPPHIF 479
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
P+ ++L N+ +PV+ + D L ++ L+ N
Sbjct: 480 SGVPL--TKVNLKTNQFTHLPVSNILDDLDLLTQIDLEDN 517
Score = 71 (30.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 54/225 (24%), Positives = 100/225 (44%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N ++L+ N I + + V L L L +N+++ F N+T Q L L+
Sbjct: 364 NPRKLILAGNIIHSLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQ---KLYLNG 420
Query: 424 NYITNLYENDKKQAPIY-IKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDA 481
N++T L + ++ ++ L L N I+E+ P F L+ LYL+ N ++ L
Sbjct: 421 NHLTKLSKG--MFLGLHNLEYLYLEYNAIKEILPGTFNPM--PKLKVLYLNNNLLQVLPP 476
Query: 482 TAFGNLDVLELLSLEHNNIA-VVVKRTFIGMPNLQIIDLSFN--EISM-LTGEQFYFSFK 537
F + + ++ +L+ N + V + L IDL N + S L G Q + K
Sbjct: 477 HIFSGVPLTKV-NLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWIQ-K 534
Query: 538 LRILNISHNRLRSLPRDVFSNTIIEKLDI-SYNQDKIRPGRESNP 581
L ++ + L + P ++K ++ + N + + PG +NP
Sbjct: 535 LSKNTVTDDILCTSPGH------LDKKELKALNSEILCPGLVNNP 573
Score = 60 (26.2 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 25/105 (23%), Positives = 47/105 (44%)
Query: 29 GTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSG 88
G T+L + G+ N+ + + ++ I+ AF+ + L I + +E L
Sbjct: 75 GLTMLHTNDFSGLTNAI--SIHLGFNNIADIEIGAFNGLGLLKQL--HINHNSLEILKED 130
Query: 89 LFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKD 133
F +EN+E + D +N ++V+ + +KL L IL D
Sbjct: 131 TFHGLENLEFLQAD--NNFITVIEPSAF----SKLNRLKVLILND 169
Score = 56 (24.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/137 (21%), Positives = 59/137 (43%)
Query: 3 LDLSHNKLSVLNMATLYS--NVTKLQHLGT--TILKGDQLQGIFNSKLRELEITGKDLKF 58
L ++HN L +L T + N+ LQ T+++ + ++L+ L + ++
Sbjct: 117 LHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKL--NRLKVLILNDNAIES 174
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPS-GLFDKIENIEQMTLDLSHNKLS----VLNM 113
+ P+ F + + L + Q++ LP G + I I + L L NK + +L +
Sbjct: 175 LPPNIFRFVPLTH---LDLRGNQLQTLPYVGFLEHIGRI--LDLQLEDNKWACNCDLLQL 229
Query: 114 ATLYSNVTKLQHLGTTI 130
T N+ +G +
Sbjct: 230 KTWLENMPPQSIIGDVV 246
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 259 (96.2 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 94/357 (26%), Positives = 158/357 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ ++ L L+ L+L N+L+ + S LQ L + + S
Sbjct: 91 NDLSLIHPKALSGLKELKVLTLQNNQLRTVP--SEAIHGLSALQSLRLDANHITSVPEDS 148
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L L +D+N++ + L NL +L + L N IS I + F F L
Sbjct: 149 F---EGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPD--FAFTNLSSL 203
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + F L L T+ L+YN L + K L ++ + N I
Sbjct: 204 VVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQ-AIKALPSLKELGFHSNSISV 262
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF P L + L DN L + F N++ L + + + N
Sbjct: 263 IPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHC---LVIRGASLVQWFPN--LTG 317
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++++SL L+ +I +P + Q LR L L +N I+ D +F LE +SL+
Sbjct: 318 TVHLESLTLTGTKISSIPDDLCQN-QKMLRTLDLSYNNIR--DLPSFNGCRALEEISLQR 374
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
N I+++ + TF G+ +L+I+DLS N I + F + L++S N L S P +
Sbjct: 375 NQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTE 431
Score = 248 (92.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 88/333 (26%), Positives = 155/333 (46%)
Query: 241 QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
Q L+IS + N + P K+ LE L + N++ I +L L L + L+ N+
Sbjct: 60 QALDISMN--NITQLPEDAF-KSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQ 116
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
+ + + H + L+ +RL N++ + D+F L +L + L N L +
Sbjct: 117 LRTVPSEAIH-GL-SALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLS 174
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
NL + + L+ N I I AF NL +LV L L +NK+K + + F + + +T L+
Sbjct: 175 NLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLET---LD 231
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADS--LRKLYLDFNEIKH 478
L+ NY+ + K P +K L +N I +P F + LR ++L N +
Sbjct: 232 LNYNYLDE-FPQAIKALPS-LKELGFHSNSISVIPDG---AFGGNPLLRTIHLYDNPLSF 286
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+ +AF NL L L + ++ V G +L+ + L+ +IS + + L
Sbjct: 287 VGNSAFHNLSDLHCLVIRGASL-VQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKML 345
Query: 539 RILNISHNRLRSLPRDVFSNT-IIEKLDISYNQ 570
R L++S+N +R LP F+ +E++ + NQ
Sbjct: 346 RTLDLSYNNIRDLPS--FNGCRALEEISLQRNQ 376
Score = 194 (73.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 107/427 (25%), Positives = 177/427 (41%)
Query: 3 LDLSHNKLSVL--NMATLYSNVTKLQHLGT--TILKGDQLQGIFNSKLRELEITGKDLKF 58
LD+S N ++ L + + + +LQ G +++ L G+ +L+ L + L+
Sbjct: 62 LDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGL--KELKVLTLQNNQLRT 119
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
+ A + A L L + I +P F+ + + + LD N L+ + + L S
Sbjct: 120 VPSEAIHGLSALQSLRLDANH--ITSVPEDSFEGLVQLRHLWLD--DNSLTEVPVRPL-S 174
Query: 119 NVTKLQHLGTTILKDREKXXXXXXXXXXRC-------NKITDLNGNLFRHLQKSIVKAKK 171
N+ LQ L T L + NKI L+ + F L ++
Sbjct: 175 NLPTLQAL-TLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDN--LETLD 231
Query: 172 NNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS 231
N N D+ K N I+ + F L+ + L N L + +
Sbjct: 232 LNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFV--GN 289
Query: 232 NVFDVFEKLQLLEI-SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS 290
+ F L L I SL FP L ++ LE L + I +I + N
Sbjct: 290 SAFHNLSDLHCLVIRGASLVQW--FPN--LTGTVH-LESLTLTGTKISSIPDDLCQNQKM 344
Query: 291 LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNL 350
L ++L YN I +L FN + L+EI L N + LI+ +TF L L + LS NL
Sbjct: 345 LRTLDLSYNNI----RDLPSFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNL 400
Query: 351 LKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD-FNLNVFSN 409
++ I + +F L + N+ +SFN++ +P +N N +KL + + KLKD F+N
Sbjct: 401 IREIHSGAFAKLGTITNLDVSFNELTS-FPTEGLNGLNQLKL-VGNFKLKDALAARDFAN 458
Query: 410 ITSKQTP 416
+ S P
Sbjct: 459 LRSLSVP 465
Score = 187 (70.9 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 85/348 (24%), Positives = 148/348 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT + + F L L+ L L N L E+ LQ L ++ + N + P
Sbjct: 139 NHITSVPEDSFEGLVQLRHLWLDDNSLT--EVPVRPLSNLPTLQALTLALN--NISSIPD 194
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ NL++L L + NN IK++ + L +L ++L YN + + + L
Sbjct: 195 FAFT-NLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQAI---KALPSL 250
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
KE+ +N + +I F L TI L N L + ++F NL+++ +V+ +
Sbjct: 251 KELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQ 310
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+PN +L L L K+ ++ N +T L+LS N I +L + +A
Sbjct: 311 WFPN-LTGTVHLESLTLTGTKISSIPDDLCQNQKMLRT---LDLSYNNIRDLPSFNGCRA 366
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ + L N+I + N Q SLR L L N I+ + + AF L + L +
Sbjct: 367 ---LEEISLQRNQISLIKENTFQGLT-SLRILDLSRNLIREIHSGAFAKLGTITNLDVSF 422
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
N + G+ L+++ +F L F LR L++ +
Sbjct: 423 NELTSFPTEGLNGLNQLKLVG-NFKLKDALAARDFA---NLRSLSVPY 466
Score = 178 (67.7 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 111/456 (24%), Positives = 194/456 (42%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
R ++ +GK L + P + + L I+ I +LP F +E+ L L+ N
Sbjct: 39 RRVDCSGKGLTAV-PEGL----SAFTQALDISMNNITQLPEDAFKSFPFLEE--LQLAGN 91
Query: 107 KLSVLNMATLYS----NVTKLQHLGT-TILKDREKXXXXXXXXXXRCNKITDLNGNLFRH 161
LS+++ L V LQ+ T+ + N IT + + F
Sbjct: 92 DLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEG 151
Query: 162 LQKSIVKAKKNNNNNEDQVSDREKXXX-XXXXXXXRCNKITDLNGNLFRHLYNLQELSLS 220
L + ++ ++N+ +V R N I+ + F +L +L L L
Sbjct: 152 LVQ--LRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLH 209
Query: 221 FNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
NK++ L+ + FD + L+ L+++++ + EFP I K L +L+ L +N+I I
Sbjct: 210 NNKIK--SLSQHCFDGLDNLETLDLNYNYLD--EFPQAI--KALPSLKELGFHSNSISVI 263
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR-LSNNYLELIESDTFYNLK 339
+ + L I+L N +S + N+ FH L ++ L L++ F NL
Sbjct: 264 PDGAFGGNPLLRTIHLYDNPLSFVGNSAFH-----NLSDLHCLVIRGASLVQ--WFPNLT 316
Query: 340 ---ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
L ++TL+ + SI +N + + LS+N I+ + P+ F L ++ LQ
Sbjct: 317 GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDL-PS-FNGCRALEEISLQR 374
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
N++ N F +TS + L+LS N I ++ + I +LD+S N + P
Sbjct: 375 NQISLIKENTFQGLTSLRI---LDLSRNLIREIHSGAFAKLGT-ITNLDVSFNELTSFPT 430
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
L + L KL +F L A F NL L +
Sbjct: 431 EGLNGL-NQL-KLVGNFKLKDALAARDFANLRSLSV 464
Score = 163 (62.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 98/396 (24%), Positives = 160/396 (40%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L EL++ G DL I P A + LTL+ N Q+ +PS + ++ + LD +H
Sbjct: 83 LEELQLAGNDLSLIHPKALSGLKELKVLTLQ--NNQLRTVPSEAIHGLSALQSLRLDANH 140
Query: 106 NKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKS 165
SV + + + +L+HL L D N +T++ +L
Sbjct: 141 IT-SVPEDS--FEGLVQLRHLW---LDD---------------NSLTEVPVRPLSNLPT- 178
Query: 166 IVKAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKL 224
++A NN + D NKI L+ + F L NL+ L L++N L
Sbjct: 179 -LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYL 237
Query: 225 QIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNL----NTLEWLAMDN-NNIKN 279
++L S S+ F L + + N L ++ +N+ +
Sbjct: 238 DEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSD 297
Query: 280 -----IRNYSLY----NLTS---LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
IR SL NLT L + L KIS I ++L N K L+ + LS N +
Sbjct: 298 LHCLVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQ-N-QKMLRTLDLSYNNI 355
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+ S F + L I+L N + IK +F+ L ++ + LS N I+ I+ AF L
Sbjct: 356 RDLPS--FNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLG 413
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
+ LD+ N+L F + + + N L +
Sbjct: 414 TITNLDVSFNELTSFPTEGLNGLNQLKLVGNFKLKD 449
Score = 162 (62.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 54/215 (25%), Positives = 96/215 (44%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+S N I + +AF + P L +L L N L + S + K+ + L L NN + +
Sbjct: 64 ISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGL--KELKV-LTLQNNQLRTV 120
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
++ ++SL L N I VP + + LR L+LD N + + NL
Sbjct: 121 -PSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQ-LRHLWLDDNSLTEVPVRPLSNLPT 178
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ L+L NNI+ + F + +L ++ L N+I L+ F L L++++N L
Sbjct: 179 LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD 238
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIRPGRESNPRPI 584
P+ + + +++L N + P P+
Sbjct: 239 EFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPL 273
Score = 124 (48.7 bits), Expect = 0.00050, P = 0.00049
Identities = 35/131 (26%), Positives = 66/131 (50%)
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ ++LD+S N I ++P + ++F L +L L N++ + A L L++L+L++N
Sbjct: 58 FTQALDISMNNITQLPEDAFKSFP-FLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQ 116
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
+ V G+ LQ + L N I+ + + F +LR L + N L +P SN
Sbjct: 117 LRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNL 176
Query: 560 -IIEKLDISYN 569
++ L ++ N
Sbjct: 177 PTLQALTLALN 187
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 259 (96.2 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 94/357 (26%), Positives = 158/357 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ ++ L L+ L+L N+L+ + S LQ L + + S
Sbjct: 91 NDLSLIHPKALSGLKELKVLTLQNNQLRTVP--SEAIHGLSALQSLRLDANHITSVPEDS 148
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L L +D+N++ + L NL +L + L N IS I + F F L
Sbjct: 149 F---EGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPD--FAFTNLSSL 203
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + F L L T+ L+YN L + K L ++ + N I
Sbjct: 204 VVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQ-AIKALPSLKELGFHSNSISV 262
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF P L + L DN L + F N++ L + + + N
Sbjct: 263 IPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHC---LVIRGASLVQWFPN--LTG 317
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++++SL L+ +I +P + Q LR L L +N I+ D +F LE +SL+
Sbjct: 318 TVHLESLTLTGTKISSIPDDLCQN-QKMLRTLDLSYNNIR--DLPSFNGCRALEEISLQR 374
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
N I+++ + TF G+ +L+I+DLS N I + F + L++S N L S P +
Sbjct: 375 NQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTE 431
Score = 248 (92.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 88/333 (26%), Positives = 155/333 (46%)
Query: 241 QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
Q L+IS + N + P K+ LE L + N++ I +L L L + L+ N+
Sbjct: 60 QALDISMN--NITQLPEDAF-KSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQ 116
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
+ + + H + L+ +RL N++ + D+F L +L + L N L +
Sbjct: 117 LRTVPSEAIH-GL-SALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLS 174
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
NL + + L+ N I I AF NL +LV L L +NK+K + + F + + +T L+
Sbjct: 175 NLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLET---LD 231
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADS--LRKLYLDFNEIKH 478
L+ NY+ + K P +K L +N I +P F + LR ++L N +
Sbjct: 232 LNYNYLDE-FPQAIKALPS-LKELGFHSNSISVIPDG---AFGGNPLLRTIHLYDNPLSF 286
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+ +AF NL L L + ++ V G +L+ + L+ +IS + + L
Sbjct: 287 VGNSAFHNLSDLHCLVIRGASL-VQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKML 345
Query: 539 RILNISHNRLRSLPRDVFSNT-IIEKLDISYNQ 570
R L++S+N +R LP F+ +E++ + NQ
Sbjct: 346 RTLDLSYNNIRDLPS--FNGCRALEEISLQRNQ 376
Score = 194 (73.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 107/427 (25%), Positives = 177/427 (41%)
Query: 3 LDLSHNKLSVL--NMATLYSNVTKLQHLGT--TILKGDQLQGIFNSKLRELEITGKDLKF 58
LD+S N ++ L + + + +LQ G +++ L G+ +L+ L + L+
Sbjct: 62 LDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGL--KELKVLTLQNNQLRT 119
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
+ A + A L L + I +P F+ + + + LD N L+ + + L S
Sbjct: 120 VPSEAIHGLSALQSLRLDANH--ITSVPEDSFEGLVQLRHLWLD--DNSLTEVPVRPL-S 174
Query: 119 NVTKLQHLGTTILKDREKXXXXXXXXXXRC-------NKITDLNGNLFRHLQKSIVKAKK 171
N+ LQ L T L + NKI L+ + F L ++
Sbjct: 175 NLPTLQAL-TLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDN--LETLD 231
Query: 172 NNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS 231
N N D+ K N I+ + F L+ + L N L + +
Sbjct: 232 LNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFV--GN 289
Query: 232 NVFDVFEKLQLLEI-SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS 290
+ F L L I SL FP L ++ LE L + I +I + N
Sbjct: 290 SAFHNLSDLHCLVIRGASLVQW--FPN--LTGTVH-LESLTLTGTKISSIPDDLCQNQKM 344
Query: 291 LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNL 350
L ++L YN I +L FN + L+EI L N + LI+ +TF L L + LS NL
Sbjct: 345 LRTLDLSYNNI----RDLPSFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNL 400
Query: 351 LKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD-FNLNVFSN 409
++ I + +F L + N+ +SFN++ +P +N N +KL + + KLKD F+N
Sbjct: 401 IREIHSGAFAKLGTITNLDVSFNELTS-FPTEGLNGLNQLKL-VGNFKLKDALAARDFAN 458
Query: 410 ITSKQTP 416
+ S P
Sbjct: 459 LRSLSVP 465
Score = 187 (70.9 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 85/348 (24%), Positives = 148/348 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT + + F L L+ L L N L E+ LQ L ++ + N + P
Sbjct: 139 NHITSVPEDSFEGLVQLRHLWLDDNSLT--EVPVRPLSNLPTLQALTLALN--NISSIPD 194
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ NL++L L + NN IK++ + L +L ++L YN + + + L
Sbjct: 195 FAFT-NLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQAI---KALPSL 250
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
KE+ +N + +I F L TI L N L + ++F NL+++ +V+ +
Sbjct: 251 KELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQ 310
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+PN +L L L K+ ++ N +T L+LS N I +L + +A
Sbjct: 311 WFPN-LTGTVHLESLTLTGTKISSIPDDLCQNQKMLRT---LDLSYNNIRDLPSFNGCRA 366
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ + L N+I + N Q SLR L L N I+ + + AF L + L +
Sbjct: 367 ---LEEISLQRNQISLIKENTFQGLT-SLRILDLSRNLIREIHSGAFAKLGTITNLDVSF 422
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
N + G+ L+++ +F L F LR L++ +
Sbjct: 423 NELTSFPTEGLNGLNQLKLVG-NFKLKDALAARDFA---NLRSLSVPY 466
Score = 178 (67.7 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 111/456 (24%), Positives = 194/456 (42%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
R ++ +GK L + P + + L I+ I +LP F +E+ L L+ N
Sbjct: 39 RRVDCSGKGLTAV-PEGL----SAFTQALDISMNNITQLPEDAFKSFPFLEE--LQLAGN 91
Query: 107 KLSVLNMATLYS----NVTKLQHLGT-TILKDREKXXXXXXXXXXRCNKITDLNGNLFRH 161
LS+++ L V LQ+ T+ + N IT + + F
Sbjct: 92 DLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEG 151
Query: 162 LQKSIVKAKKNNNNNEDQVSDREKXXX-XXXXXXXRCNKITDLNGNLFRHLYNLQELSLS 220
L + ++ ++N+ +V R N I+ + F +L +L L L
Sbjct: 152 LVQ--LRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLH 209
Query: 221 FNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
NK++ L+ + FD + L+ L+++++ + EFP I K L +L+ L +N+I I
Sbjct: 210 NNKIK--SLSQHCFDGLDNLETLDLNYNYLD--EFPQAI--KALPSLKELGFHSNSISVI 263
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR-LSNNYLELIESDTFYNLK 339
+ + L I+L N +S + N+ FH L ++ L L++ F NL
Sbjct: 264 PDGAFGGNPLLRTIHLYDNPLSFVGNSAFH-----NLSDLHCLVIRGASLVQ--WFPNLT 316
Query: 340 ---ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
L ++TL+ + SI +N + + LS+N I+ + P+ F L ++ LQ
Sbjct: 317 GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDL-PS-FNGCRALEEISLQR 374
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
N++ N F +TS + L+LS N I ++ + I +LD+S N + P
Sbjct: 375 NQISLIKENTFQGLTSLRI---LDLSRNLIREIHSGAFAKLGT-ITNLDVSFNELTSFPT 430
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
L + L KL +F L A F NL L +
Sbjct: 431 EGLNGL-NQL-KLVGNFKLKDALAARDFANLRSLSV 464
Score = 163 (62.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 98/396 (24%), Positives = 160/396 (40%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L EL++ G DL I P A + LTL+ N Q+ +PS + ++ + LD +H
Sbjct: 83 LEELQLAGNDLSLIHPKALSGLKELKVLTLQ--NNQLRTVPSEAIHGLSALQSLRLDANH 140
Query: 106 NKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKS 165
SV + + + +L+HL L D N +T++ +L
Sbjct: 141 IT-SVPEDS--FEGLVQLRHLW---LDD---------------NSLTEVPVRPLSNLPT- 178
Query: 166 IVKAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKL 224
++A NN + D NKI L+ + F L NL+ L L++N L
Sbjct: 179 -LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYL 237
Query: 225 QIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNL----NTLEWLAMDN-NNIKN 279
++L S S+ F L + + N L ++ +N+ +
Sbjct: 238 DEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSD 297
Query: 280 -----IRNYSLY----NLTS---LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
IR SL NLT L + L KIS I ++L N K L+ + LS N +
Sbjct: 298 LHCLVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQ-N-QKMLRTLDLSYNNI 355
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+ S F + L I+L N + IK +F+ L ++ + LS N I+ I+ AF L
Sbjct: 356 RDLPS--FNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLG 413
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
+ LD+ N+L F + + + N L +
Sbjct: 414 TITNLDVSFNELTSFPTEGLNGLNQLKLVGNFKLKD 449
Score = 162 (62.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 54/215 (25%), Positives = 96/215 (44%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+S N I + +AF + P L +L L N L + S + K+ + L L NN + +
Sbjct: 64 ISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGL--KELKV-LTLQNNQLRTV 120
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
++ ++SL L N I VP + + LR L+LD N + + NL
Sbjct: 121 -PSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQ-LRHLWLDDNSLTEVPVRPLSNLPT 178
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ L+L NNI+ + F + +L ++ L N+I L+ F L L++++N L
Sbjct: 179 LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD 238
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIRPGRESNPRPI 584
P+ + + +++L N + P P+
Sbjct: 239 EFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPL 273
Score = 124 (48.7 bits), Expect = 0.00050, P = 0.00049
Identities = 35/131 (26%), Positives = 66/131 (50%)
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ ++LD+S N I ++P + ++F L +L L N++ + A L L++L+L++N
Sbjct: 58 FTQALDISMNNITQLPEDAFKSFP-FLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQ 116
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
+ V G+ LQ + L N I+ + + F +LR L + N L +P SN
Sbjct: 117 LRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNL 176
Query: 560 -IIEKLDISYN 569
++ L ++ N
Sbjct: 177 PTLQALTLALN 187
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 259 (96.2 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 94/357 (26%), Positives = 159/357 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ ++ L L+ L+L N+L+ + S LQ L + + S
Sbjct: 91 NDLSFIHPKALSGLKELKVLTLQNNQLKTVP--SEAIRGLSALQSLRLDANHITSVPEDS 148
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L L +D+N + + L NL +L + L N IS I + F F L
Sbjct: 149 F---EGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPD--FAFTNLSSL 203
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + F L L T+ L+YN L + K L ++ + N I
Sbjct: 204 VVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEFPQ-AIKALPSLKELGFHSNSISV 262
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF P L + L DN L + F N++ + L + + + N
Sbjct: 263 IPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS---LVIRGASLVQWFPN--LAG 317
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++++SL L+ +I +P + Q LR L L +N+I+ D +F LE +SL+
Sbjct: 318 TVHLESLTLTGTKISSIPDDLCQN-QKMLRTLDLSYNDIR--DLPSFNGCRALEEISLQR 374
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
N I+++ + TF G+ +L+I+DLS N I + F + L++S N L S P +
Sbjct: 375 NQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTE 431
Score = 245 (91.3 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 88/333 (26%), Positives = 156/333 (46%)
Query: 241 QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
Q L+IS + N + P KN LE L + N++ I +L L L + L+ N+
Sbjct: 60 QALDISMN--NITQLPEDAF-KNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQ 116
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
+ + + + L+ +RL N++ + D+F L +L + L N+L +
Sbjct: 117 LKTVPSEAIR-GL-SALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLS 174
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
NL + + L+ N I I AF NL +LV L L +NK+K + + F + + +T ++LN
Sbjct: 175 NLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLET-LDLN 233
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADS--LRKLYLDFNEIKH 478
+N + + K P +K L +N I +P FA + LR ++L N +
Sbjct: 234 YNN---LDEFPQAIKALPS-LKELGFHSNSISVIPDG---AFAGNPLLRTIHLYDNPLSF 286
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+ +AF NL L L + ++ V G +L+ + L+ +IS + + L
Sbjct: 287 VGNSAFHNLSDLHSLVIRGASL-VQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKML 345
Query: 539 RILNISHNRLRSLPRDVFSNT-IIEKLDISYNQ 570
R L++S+N +R LP F+ +E++ + NQ
Sbjct: 346 RTLDLSYNDIRDLPS--FNGCRALEEISLQRNQ 376
Score = 191 (72.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 101/397 (25%), Positives = 162/397 (40%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L EL++ G DL FI P A + LTL+ N Q++ +PS + ++ + LD +H
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQ--NNQLKTVPSEAIRGLSALQSLRLDANH 140
Query: 106 ---------NKLSVLNMATLYSNV-TK-----LQHLGT----TILKDREKXXXXXXXXXX 146
L L L N+ T+ L +L T T+ +
Sbjct: 141 ITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNL 200
Query: 147 RCNKITDLNGNLFRHLQKSIVKAKKN------NNNNEDQVSDREKXXXXXXXXXXRCNKI 200
+ L+ N + L + N N NN D+ K N I
Sbjct: 201 SSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEFPQAIKALPSLKELGFHSNSI 260
Query: 201 TDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYIL 260
+ + F L+ + L N L + NS ++ + L+ SL FP L
Sbjct: 261 SVIPDGAFAGNPLLRTIHLYDNPLSFVG-NSAFHNLSDLHSLVIRGASLVQW--FPN--L 315
Query: 261 NKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEI 320
++ LE L + I +I + N L ++L YN I +L FN + L+EI
Sbjct: 316 AGTVH-LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDI----RDLPSFNGCRALEEI 370
Query: 321 RLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L N + LI+ TF L L + LS NL++ I + +F L + N+ +SFN++ +P
Sbjct: 371 SLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS-FP 429
Query: 381 NAFVNLPNLVKLDLQDNKLKD-FNLNVFSNITSKQTP 416
+N N +KL + + +LKD F+N+ S P
Sbjct: 430 TEGLNGLNQLKL-VGNFQLKDALAARDFANLRSLSVP 465
Score = 184 (69.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 84/348 (24%), Positives = 148/348 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT + + F L L+ L L N L E+ LQ L ++ + N + P
Sbjct: 139 NHITSVPEDSFEGLVQLRHLWLDDNILT--EVPVRPLSNLPTLQALTLALN--NISSIPD 194
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ NL++L L + NN IK++ + L +L ++L YN + + + L
Sbjct: 195 FAFT-NLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEFPQAI---KALPSL 250
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
KE+ +N + +I F L TI L N L + ++F NL+++ ++V+ +
Sbjct: 251 KELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQ 310
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+PN +L L L K+ ++ N +T L+LS N I +L + +A
Sbjct: 311 WFPN-LAGTVHLESLTLTGTKISSIPDDLCQNQKMLRT---LDLSYNDIRDLPSFNGCRA 366
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ + L N+I + Q SLR L L N I+ + + AF L + L +
Sbjct: 367 ---LEEISLQRNQISLIKETTFQGLT-SLRILDLSRNLIREIHSGAFAKLGTITNLDVSF 422
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
N + G+ L+++ +F L F LR L++ +
Sbjct: 423 NELTSFPTEGLNGLNQLKLVG-NFQLKDALAARDFA---NLRSLSVPY 466
Score = 180 (68.4 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 114/459 (24%), Positives = 196/459 (42%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTL---DL 103
R ++ +GK L + P + + L I+ I +LP F +E++ L DL
Sbjct: 39 RRVDCSGKGLTAV-PEGL----SAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDL 93
Query: 104 S--HNK----LSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGN 157
S H K L L + TL +N K T+ + + N IT + +
Sbjct: 94 SFIHPKALSGLKELKVLTLQNNQLK------TVPSEAIRGLSALQSLRLDANHITSVPED 147
Query: 158 LFRHLQKSIVKAKKNNNNNEDQVSDREKXXX-XXXXXXXRCNKITDLNGNLFRHLYNLQE 216
F L + ++ ++N +V R N I+ + F +L +L
Sbjct: 148 SFEGLVQ--LRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVV 205
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
L L NK++ L+ + FD + L+ L+++++ N +EFP I K L +L+ L +N+
Sbjct: 206 LHLHNNKIK--SLSQHCFDGLDNLETLDLNYN--NLDEFPQAI--KALPSLKELGFHSNS 259
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
I I + + L I+L N +S + N+ FH N+ L + + L++ F
Sbjct: 260 ISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFH-NLSD-LHSLVIRG--ASLVQ--WFP 313
Query: 337 NLK---ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
NL L ++TL+ + SI +N + + LS+N I+ + P+ F L ++
Sbjct: 314 NLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDL-PS-FNGCRALEEIS 371
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE 453
LQ N++ F +TS + L+LS N I ++ + I +LD+S N +
Sbjct: 372 LQRNQISLIKETTFQGLTSLRI---LDLSRNLIREIHSGAFAKLGT-ITNLDVSFNELTS 427
Query: 454 VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
P L + L KL +F L A F NL L +
Sbjct: 428 FPTEGLNGL-NQL-KLVGNFQLKDALAARDFANLRSLSV 464
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/206 (26%), Positives = 95/206 (46%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+S N I + +AF N P L +L L N L + S + K+ + L L NN + +
Sbjct: 64 ISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGL--KELKV-LTLQNNQLKTV 120
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
++ + ++SL L N I VP + + LR L+LD N + + NL
Sbjct: 121 -PSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQ-LRHLWLDDNILTEVPVRPLSNLPT 178
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ L+L NNI+ + F + +L ++ L N+I L+ F L L++++N L
Sbjct: 179 LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLD 238
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIRP 575
P+ + + +++L N + P
Sbjct: 239 EFPQAIKALPSLKELGFHSNSISVIP 264
Score = 123 (48.4 bits), Expect = 0.00064, P = 0.00064
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ ++LD+S N I ++P + + F L +L L N++ + A L L++L+L++N
Sbjct: 58 FTQALDISMNNITQLPEDAFKNFP-FLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQ 116
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
+ V G+ LQ + L N I+ + + F +LR L + N L +P SN
Sbjct: 117 LKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNL 176
Query: 560 -IIEKLDISYN 569
++ L ++ N
Sbjct: 177 PTLQALTLALN 187
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 257 (95.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 102/374 (27%), Positives = 177/374 (47%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
L LS N L EL +F L+ L +S + + + P + L++L+ L + +N
Sbjct: 71 LDLSMNNLT--ELQPGLFHHLRFLEELRLSGN--HLSHIPRQAFS-GLHSLKILMLQSNQ 125
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
++ I +L+ L SL + L+ N IS + F + L+ + L +N L I
Sbjct: 126 LRGIPAEALWELPSLQSLRLDANLISLVPERSFE-GLSS-LRHLWLDDNALTEIPVRALN 183
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
NL L +TL+ N ++ I +F+NL +++ + L N+I+++ ++F L NL LDL
Sbjct: 184 NLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNY 243
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
N+L++F + + + Q L NN I + E P+ ++++ +N IQ V
Sbjct: 244 NELQEFPVAI-RTLGRLQ---ELGFHNNNIKAIPEKAFMGNPL-LQTIHFYDNPIQFVGR 298
Query: 457 NFLQTFADSLRKLYL----DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP 512
+ Q + L L L D E L T LE+L+L I ++ +P
Sbjct: 299 SAFQ-YLSKLHTLSLNGATDIQEFPDLKGTTS-----LEILTLTRAGIRLLPAGMCQQLP 352
Query: 513 NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQD 571
L+I++LS N+I L + KL + + HNR+ + D FS + ++ LD+S+N
Sbjct: 353 RLRILELSHNQIEELPS--LHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAI 410
Query: 572 K-IRPGRESNPRPI 584
+ I P S R +
Sbjct: 411 RAIHPEAFSTLRSL 424
Score = 252 (93.8 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 105/377 (27%), Positives = 171/377 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFN--------------KLQIIELNSNVFD------VF 237
N +T+L LF HL L+EL LS N L+I+ L SN ++
Sbjct: 76 NNLTELQPGLFHHLRFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALW 135
Query: 238 E--KLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYIN 295
E LQ L + +L + P + L++L L +D+N + I +L NL +L +
Sbjct: 136 ELPSLQSLRLDANLISL--VPERSF-EGLSSLRHLWLDDNALTEIPVRALNNLPALQAMT 192
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L N+I I + F N+ L + L NN ++ + + +F L L T+ L+YN L+
Sbjct: 193 LALNRIRHIPDYAFQ-NLTS-LVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFP 250
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT 415
+ + L + + N IK I AF+ P L + DN ++ + F ++ T
Sbjct: 251 V-AIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLSKLHT 309
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
LS N T++ E + ++ L L+ I+ +P Q LR L L N+
Sbjct: 310 -----LSLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPAGMCQQLP-RLRILELSHNQ 363
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
I+ L + LE + L+HN I + TF + +LQ +DLS+N I + E F
Sbjct: 364 IEELPS--LHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTL 421
Query: 536 FKLRILNISHNRLRSLP 552
L L+++ N+L +LP
Sbjct: 422 RSLVKLDLTDNQLTTLP 438
Score = 241 (89.9 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 77/277 (27%), Positives = 132/277 (47%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKR-LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
Y++L N ++++ LFH H R L+E+RLS N+L I F L L + L N L
Sbjct: 70 YLDLSMNNLTELQPGLFH---HLRFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQL 126
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
+ I + L ++ ++ L N I + +F L +L L L DN L + + +N+
Sbjct: 127 RGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLP 186
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
+ Q + L+ N I ++ + + + L L NNRIQ V + + +L L L
Sbjct: 187 ALQA---MTLALNRIRHIPDYAFQNLTSLVV-LHLHNNRIQHVGTHSFEGL-HNLETLDL 241
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
++NE++ A L L+ L +NNI + ++ F+G P LQ I N I +
Sbjct: 242 NYNELQEFPV-AIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSA 300
Query: 532 FYFSFKLRILNISH-NRLRSLPRDVFSNTIIEKLDIS 567
F + KL L+++ ++ P D+ T +E L ++
Sbjct: 301 FQYLSKLHTLSLNGATDIQEFP-DLKGTTSLEILTLT 336
Score = 201 (75.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 70/247 (28%), Positives = 119/247 (48%)
Query: 320 IRLSNNYLELIESDTFYNLKELNT-ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
I LS + EL S+ +L L + LS N L ++ F +L + + LS N + +I
Sbjct: 46 IMLSADCSELGLSEVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHI 105
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
AF L +L L LQ N+L+ + S Q+ L L N I+ + E +
Sbjct: 106 PRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQS---LRLDANLISLVPERSFEGLS 162
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
++ L L +N + E+PV L +L+ + L N I+H+ AF NL L +L L +N
Sbjct: 163 S-LRHLWLDDNALTEIPVRALNNLP-ALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNN 220
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF-S 557
I V +F G+ NL+ +DL++NE+ +L+ L +N ++++P F
Sbjct: 221 RIQHVGTHSFEGLHNLETLDLNYNELQEFPVAIRTLG-RLQELGFHNNNIKAIPEKAFMG 279
Query: 558 NTIIEKL 564
N +++ +
Sbjct: 280 NPLLQTI 286
Score = 187 (70.9 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 101/418 (24%), Positives = 177/418 (42%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T+L LF HL + + + + + N+ + N++ +
Sbjct: 76 NNLTELQPGLFHHL-RFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEAL 134
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
L +LQ L L N + ++ S F+ L+ L + + E P LN NL L+
Sbjct: 135 WELPSLQSLRLDANLISLVPERS--FEGLSSLRHLWLDDNALT--EIPVRALN-NLPALQ 189
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+ + N I++I +Y+ NLTSL ++L N+I + + F +H L+ + L NY E
Sbjct: 190 AMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFE-GLHN-LETLDL--NYNE 245
Query: 329 LIESDT-FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNL 386
L E L L + N +K+I +F N +L + + N I+++ +AF L
Sbjct: 246 LQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMG-NPLLQTIHFYDNPIQFVGRSAFQYL 304
Query: 387 PNLVKLDLQD-NKLKDF-------NLNVFSNITS--KQTPMNL--NLSNNYITNLYENDK 434
L L L +++F +L + + + + P + L I L N
Sbjct: 305 SKLHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQI 364
Query: 435 KQAPIY-----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
++ P ++ + L +NRI E+ + + SL+ L L +N I+ + AF L
Sbjct: 365 EELPSLHRCQKLEEIGLQHNRIWEIGADTFSQLS-SLQALDLSWNAIRAIHPEAFSTLRS 423
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN-EISMLTGEQFYFSF-KLRILNISH 545
L L L N + + G+ L + L N +S + SF KLRIL + +
Sbjct: 424 LVKLDLTDNQLTTL---PLAGLGGLMHLKLKGNLALSQAFSKD---SFPKLRILEVPY 475
Score = 184 (69.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 94/400 (23%), Positives = 176/400 (44%)
Query: 37 QLQ-GIFNSK--LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKI 93
+LQ G+F+ L EL ++G L I AF + + L L+ + Q+ +P+ ++
Sbjct: 80 ELQPGLFHHLRFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQ--SNQLRGIPAEALWEL 137
Query: 94 ENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL-----GTTILKDRE-KXXXXXXXXXXR 147
+++ + LD N +S++ + + ++ L+HL T + R
Sbjct: 138 PSLQSLRLDA--NLISLVPERS-FEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLA 194
Query: 148 CNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNL 207
N+I + F++L S+V +NN + + + N++ + +
Sbjct: 195 LNRIRHIPDYAFQNLT-SLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPVAI 253
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFD-VFEKLQLLEISFSLFNSNEFPYYILNKNLNT 266
R L LQEL N ++ I + + + + + + + + F Y L+K L+T
Sbjct: 254 -RTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQY--LSK-LHT 309
Query: 267 LEWLAMDNNNIKNIRNY-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
L N +I+ + L TSL + L I + + + RL+ + LS+N
Sbjct: 310 LSL-----NGATDIQEFPDLKGTTSLEILTLTRAGIRLLPAGMCQ-QL-PRLRILELSHN 362
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
+E E + + ++L I L +N + I +F L+++ + LS+N I+ I+P AF
Sbjct: 363 QIE--ELPSLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFST 420
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
L +LVKLDL DN+L L + + NL LS +
Sbjct: 421 LRSLVKLDLTDNQLTTLPLAGLGGLMHLKLKGNLALSQAF 460
Score = 50 (22.7 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
P+ D + A DL++ + EL GLF + +E++ L +H
Sbjct: 61 PADLDPLTAYLDLSMN----NLTELQPGLFHHLRFLEELRLSGNH 101
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 257 (95.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 97/355 (27%), Positives = 166/355 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ + G F LY+L+ L L N+L I + ++++ LQ L + +L + P
Sbjct: 100 NHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEA-LWEL-PSLQSLRLDANLISL--VPE 155
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L++L L +D+N + I +L NL +L + L N+IS I + F N+ L
Sbjct: 156 RSF-EGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQ-NLTS-L 212
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + + +F L L T+ L+YN L+ + + L + + N IK
Sbjct: 213 VVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPV-AIRTLGRLQELGFHNNNIKA 271
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF+ P L + DN ++ + F + T LS N ++ E +
Sbjct: 272 IPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHT-----LSLNGAMDIQEFPDLKG 326
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ L L+ I+ +P Q LR L L N+I+ L + LE + L+H
Sbjct: 327 TTSLEILTLTRAGIRLLPSGMCQQLP-RLRVLELSHNQIEELPS--LHRCQKLEEIGLQH 383
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
N I + TF + +LQ +DLS+N I + E F L L+++ N+L +LP
Sbjct: 384 NRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTLP 438
Score = 229 (85.7 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 75/277 (27%), Positives = 132/277 (47%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKR-LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
Y++L N ++++ LFH H R L+E+RLS N+L I F L L + L N L
Sbjct: 70 YLDLSMNNLTELQPGLFH---HLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQL 126
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
I + L ++ ++ L N I + +F L +L L L DN L + + +N+
Sbjct: 127 GGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLP 186
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
+ Q + L+ N I+++ + + + L L NNRIQ + + + +L L L
Sbjct: 187 ALQA---MTLALNRISHIPDYAFQNLTSLVV-LHLHNNRIQHLGTHSFEGL-HNLETLDL 241
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
++N+++ A L L+ L +NNI + ++ F+G P LQ I N I +
Sbjct: 242 NYNKLQEFPV-AIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSA 300
Query: 532 FYFSFKLRILNISHNR-LRSLPRDVFSNTIIEKLDIS 567
F + KL L+++ ++ P D+ T +E L ++
Sbjct: 301 FQYLPKLHTLSLNGAMDIQEFP-DLKGTTSLEILTLT 336
Score = 224 (83.9 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 103/375 (27%), Positives = 172/375 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T+L LF HL L+EL LS N L I F L++L + + P
Sbjct: 76 NNLTELQPGLFHHLRFLEELRLSGNHLSHIP--GQAFSGLYSLKILMLQNNQLGG--IPA 131
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L + L +L+ L +D N I + S L+SL ++ L+ N +++I + N+ L
Sbjct: 132 EALWE-LPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALN-NL-PAL 188
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L+ N + I F NL L + L N ++ + T SF+ L+N+ + L++N+++
Sbjct: 189 QAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQE 248
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+P A L L +L +N +K F QT ++ +N I + + +
Sbjct: 249 -FPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQT---IHFYDNPIQFVGRSAFQYL 304
Query: 438 PIYIKSLDLSNNR-IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
P + +L L+ IQE P + T SL L L I+ L + L L +L L
Sbjct: 305 P-KLHTLSLNGAMDIQEFP-DLKGT--TSLEILTLTRAGIRLLPSGMCQQLPRLRVLELS 360
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
HN I + + L+ I L N I + + F L+ L++S N +RS+ + F
Sbjct: 361 HNQIEELP--SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAF 418
Query: 557 SNT-IIEKLDISYNQ 570
S + KLD++ NQ
Sbjct: 419 STLHSLVKLDLTDNQ 433
Score = 195 (73.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 97/401 (24%), Positives = 177/401 (44%)
Query: 37 QLQ-GIFNSK--LRELEITGKDLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDK 92
+LQ G+F+ L EL ++G L I AF + Y L L + N Q+ +P+ +
Sbjct: 80 ELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGL---YSLKILMLQNNQLGGIPAEALWE 136
Query: 93 IENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL-----GTTILKDRE-KXXXXXXXXXX 146
+ +++ + LD N +S++ + + ++ L+HL T + R
Sbjct: 137 LPSLQSLRLDA--NLISLVPERS-FEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTL 193
Query: 147 RCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGN 206
N+I+ + F++L S+V +NN + + + NK+ +
Sbjct: 194 ALNRISHIPDYAFQNLT-SLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVA 252
Query: 207 LFRHLYNLQELSLSFNKLQIIELNSNVFD-VFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
+ R L LQEL N ++ I + + + + + + + + F Y L K L+
Sbjct: 253 I-RTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQY--LPK-LH 308
Query: 266 TLEWLAMDNNNIKNIRNY-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
TL N +I+ + L TSL + L I + + + + RL+ + LS+
Sbjct: 309 TLSL-----NGAMDIQEFPDLKGTTSLEILTLTRAGIRLLPSGMCQ-QL-PRLRVLELSH 361
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N +E E + + ++L I L +N + I +F L+++ + LS+N I+ I+P AF
Sbjct: 362 NQIE--ELPSLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFS 419
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
L +LVKLDL DN+L L + + NL LS +
Sbjct: 420 TLHSLVKLDLTDNQLTTLPLAGLGGLMHLKLKGNLALSQAF 460
Score = 186 (70.5 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 99/417 (23%), Positives = 175/417 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T+L LF HL + + + + + N+ + N++ +
Sbjct: 76 NNLTELQPGLFHHL-RFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEAL 134
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
L +LQ L L N + ++ S F+ L+ L + + E P LN NL L+
Sbjct: 135 WELPSLQSLRLDANLISLVPERS--FEGLSSLRHLWLDDNALT--EIPVRALN-NLPALQ 189
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+ + N I +I +Y+ NLTSL ++L N+I + + F +H L+ + L+ N L+
Sbjct: 190 AMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFE-GLHN-LETLDLNYNKLQ 247
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLP 387
L L + N +K+I +F N +L + + N I+++ +AF LP
Sbjct: 248 EFPV-AIRTLGRLQELGFHNNNIKAIPEKAFMG-NPLLQTIHFYDNPIQFVGRSAFQYLP 305
Query: 388 NLVKLDLQDNK-LKDF-------NLNVFS----NITSKQTPMNLNLSNNYITNLYENDKK 435
L L L +++F +L + + I + M L + L N +
Sbjct: 306 KLHTLSLNGAMDIQEFPDLKGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIE 365
Query: 436 QAPIY-----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
+ P ++ + L +NRI E+ + + SL+ L L +N I+ + AF L L
Sbjct: 366 ELPSLHRCQKLEEIGLQHNRIWEIGADTFSQLS-SLQALDLSWNAIRSIHPEAFSTLHSL 424
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN-EISMLTGEQFYFSF-KLRILNISH 545
L L N + + G+ L + L N +S + SF KLRIL + +
Sbjct: 425 VKLDLTDNQLTTL---PLAGLGGLMHLKLKGNLALSQAFSKD---SFPKLRILEVPY 475
Score = 183 (69.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 68/247 (27%), Positives = 117/247 (47%)
Query: 320 IRLSNNYLELIESDTFYNLKELNT-ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
I LS + EL S +L L + LS N L ++ F +L + + LS N + +I
Sbjct: 46 IMLSADCSELGLSAVPGDLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHI 105
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
AF L +L L LQ+N+L + S Q+ L L N I+ + E +
Sbjct: 106 PGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQS---LRLDANLISLVPERSFEGLS 162
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
++ L L +N + E+PV L +L+ + L N I H+ AF NL L +L L +N
Sbjct: 163 S-LRHLWLDDNALTEIPVRALNNLP-ALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNN 220
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF-S 557
I + +F G+ NL+ +DL++N++ +L+ L +N ++++P F
Sbjct: 221 RIQHLGTHSFEGLHNLETLDLNYNKLQEFPVAIRTLG-RLQELGFHNNNIKAIPEKAFMG 279
Query: 558 NTIIEKL 564
N +++ +
Sbjct: 280 NPLLQTI 286
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 57/215 (26%), Positives = 95/215 (44%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
LS N + + P F +L L +L L N L FS + S + M L NN + +
Sbjct: 73 LSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILM---LQNNQLGGI 129
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
+ P ++SL L N I VP + + SLR L+LD N + + A NL
Sbjct: 130 PAEALWELPS-LQSLRLDANLISLVPERSFEGLS-SLRHLWLDDNALTEIPVRALNNLPA 187
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ ++L N I+ + F + +L ++ L N I L F L L++++N+L+
Sbjct: 188 LQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQ 247
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIRPGRESNPRPI 584
P + + +++L N K P + P+
Sbjct: 248 EFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPL 282
Score = 50 (22.7 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH-NKLSVLNMATLYS- 118
P D + A DL++ + EL GLF + +E++ L +H + + + LYS
Sbjct: 61 PGDLDPLTAYLDLSMN----NLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSL 116
Query: 119 NVTKLQH 125
+ LQ+
Sbjct: 117 KILMLQN 123
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 164 (62.8 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 43/135 (31%), Positives = 72/135 (53%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ I LE N I I F + +++L+ I LSNN + I D F L+ LN++ L N
Sbjct: 310 TMTEIRLELNGIKSIPPGAF--SPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
+ + F L + ++L+ N+I + P+AF +L NL L L DNK++ F++
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 427
Query: 410 ITSKQTPMNLNLSNN 424
+ + QT L+L+ N
Sbjct: 428 LRAIQT---LHLAQN 439
Score = 162 (62.1 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 52/167 (31%), Positives = 83/167 (49%)
Query: 360 KNL-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPM 417
KN+ + + L+ N I I+ N FV L L L L +N++ F ++ ++ +
Sbjct: 57 KNIPRSTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRL 116
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
N N + L++N+ QA + LDLS N IQ +P + D L+ L LD N+I
Sbjct: 117 NRNQLHTLPELLFQNN--QA---LSRLDLSENTIQAIPRKAFRGATD-LKNLQLDKNQIS 170
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ AF L LE+L+L +NNI + +F MP L+ L N +
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 155 (59.6 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 262 KNL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEI 320
KN+ + E L ++ NNI I L L + L N+I + F + K L+ +
Sbjct: 57 KNIPRSTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAF--DDMKELERL 114
Query: 321 RLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
RL+ N L + F N + L+ + LS N +++I +F+ ++ N+ L NQI I
Sbjct: 115 RLNRNQLHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEE 174
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
AF L L L L +N + ++ F+++ +T L +N++
Sbjct: 175 GAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT---FRLHSNHL 217
Score = 151 (58.2 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 91/343 (26%), Positives = 148/343 (43%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N++ I+E +F+KL L +I+ S +E + E L +
Sbjct: 544 ELRLNNNEISILEATG----IFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSE-LHLTA 598
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N +++IR+ L L + L N+IS IHN+ F + RL + L +N + I
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRL--LSLYDNQIATISPGA 656
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLPNLVK-L 392
F L+ L+T+ NLL + F N N L + + + K + N P+ ++ +
Sbjct: 657 FDTLQALSTL----NLLAN----PF-NCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQI 707
Query: 393 DLQDNKLKDFNLNVF----SNITSKQTPMNLNLSNNYI--TNLYEND-KKQAPIYIKSLD 445
LQD DF S + Q P + + +N + + K P + L
Sbjct: 708 PLQDVAFPDFRCEEGQEEGSCLPRPQCPQECACLDTVVRCSNKHLHVLPKGIPKNVTELY 767
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L TF L+ + L N+I L ++F N+ L L L +N + +
Sbjct: 768 LDGNQFTLVPGQ-LSTFK-YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 825
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F G+ +L+++ L N+IS L F L L I N L
Sbjct: 826 LAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPL 868
Score = 141 (54.7 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 37/133 (27%), Positives = 71/133 (53%)
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
Q+ L L+NN I+ L + ++K ++LSNN++ E+ + A S+ +L+L
Sbjct: 540 QSTAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTA 598
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+++ + + F LD L L L +N I+ + +F G+ N++++ L N+I+ ++ F
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFD 658
Query: 534 FSFKLRILNISHN 546
L LN+ N
Sbjct: 659 TLQALSTLNLLAN 671
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 37/140 (26%), Positives = 66/140 (47%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L L+ N IT +++ND ++ L L N+I V + L +L L+ N++
Sbjct: 66 LELNGNNITRIHKNDFVGLK-QLRVLQLMENQIGVVERGAFDDMKE-LERLRLNRNQLHT 123
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
L F N L L L N I + ++ F G +L+ + L N+IS + F L
Sbjct: 124 LPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 539 RILNISHNRLRSLPRDVFSN 558
+L +++N + ++P F++
Sbjct: 184 EVLTLNNNNITTIPVSSFNH 203
Score = 119 (46.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 41/154 (26%), Positives = 73/154 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT ++ N F L L+ L L N++ ++E + FD ++L+ L ++ + ++ P
Sbjct: 71 NNITRIHKNDFVGLKQLRVLQLMENQIGVVERGA--FDDMKELERLRLNRNQLHT--LPE 126
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ N L L + N I+ I + T L + L+ N+IS I F + L
Sbjct: 127 LLFQNN-QALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFR--ALRGL 183
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+ + L+NN + I +F ++ +L T L N L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 115 (45.5 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P + + L N I+ +P + LR++ L N+I + AF L L L L
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + + F G+ LQ++ L+ N+I+ + + F L +L++ N+++SL + F+
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT 426
Query: 558 NT-IIEKLDISYN 569
+ I+ L ++ N
Sbjct: 427 SLRAIQTLHLAQN 439
Score = 100 (40.3 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 35/135 (25%), Positives = 66/135 (48%)
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIAVV 503
+ S+ ++ ++P Q+ A+ L L+ NEI L+AT F L L+ ++L +N ++ +
Sbjct: 525 ECSSLKLTKIPERIPQSTAE----LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEI 580
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IE 562
F G ++ + L+ N++ + F LR L + +NR+ + D F+ +
Sbjct: 581 EDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVR 640
Query: 563 KLDISYNQ-DKIRPG 576
L + NQ I PG
Sbjct: 641 LLSLYDNQIATISPG 655
Score = 99 (39.9 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N+ + + EIRL N ++ I F ++L I LS N + I +F+ L ++ ++VL
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I + F L L L L NK+ + F ++ Q L+L +N I +L +
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDL---QNLSLLSLYDNKIQSLAK 422
Query: 432 NDKKQAPIYIKSLDLSNN 449
I++L L+ N
Sbjct: 423 GTFTSLRA-IQTLHLAQN 439
Score = 96 (38.9 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N IK+I + L I+L N+I++I + F + + L +
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQ-GL-RSLNSLV 363
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + ++ +F++L N+ + L N+I+ +
Sbjct: 364 LYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKG 423
Query: 382 AFVNLPNLVKLDLQDNK-LKDFNL 404
F +L + L L N + D NL
Sbjct: 424 TFTSLRAIQTLHLAQNPFICDCNL 447
Score = 94 (38.1 bits), Expect = 8.2e-14, Sum P(3) = 8.2e-14
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 465 SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ +LYLD N+ L L+L+ L +N I+ + +F M L + LS+N +
Sbjct: 762 NVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 525 SMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
+ F LR+L++ N + +L +F++ T + L I N
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGAN 866
Score = 89 (36.4 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELL 493
++ P L L+NN I + + L+K+ L N++ ++ AF G V EL
Sbjct: 536 ERIPQSTAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSEL- 594
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + F G+ L+ + L N IS + + F +R+L++ N++ ++
Sbjct: 595 HLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISP 654
Query: 554 DVF 556
F
Sbjct: 655 GAF 657
Score = 86 (35.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 26/113 (23%), Positives = 56/113 (49%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ-GIFN--SKLRELEITGKDLKFI 59
L L++N++S+L ++ +T L+ + + K +++ G F + + EL +T L+ I
Sbjct: 545 LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLN 112
F +D TL + N +I + + F + N+ L L N+++ ++
Sbjct: 605 RSGMFRGLDGLR--TLMLRNNRISCIHNDSFTGLRNVR--LLSLYDNQIATIS 653
Score = 83 (34.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 77/368 (20%), Positives = 146/368 (39%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGI----F--NSKLRELEITGKDL 56
L L N++ V+ + ++ +L+ L L +QL + F N L L+++ +
Sbjct: 90 LQLMENQIGVVERGA-FDDMKELERLR---LNRNQLHTLPELLFQNNQALSRLDLSENTI 145
Query: 57 KFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLD---------LSHN 106
+ I AF DL L++ QI + G F + +E +TL+ S N
Sbjct: 146 QAIPRKAFRGAT---DLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN 202
Query: 107 KLSVLNMATLYSNVTKLQ-HLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKS 165
+ L L+SN HL R++ +C+ L G +QKS
Sbjct: 203 HMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT---QCSGPASLRGLNVAEVQKS 259
Query: 166 IVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHL-YNLQELSLSFNKL 224
+ +V N I D G + NL E +++ +L
Sbjct: 260 EFSC--SGQGEAGRVPSCTLSSGSCPAMCSCSNGIVDCRGKGLTAIPANLPE-TMTEIRL 316
Query: 225 QIIELNS---NVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIR 281
++ + S F + KL+ +++S + + P + L +L L + N I ++
Sbjct: 317 ELNGIKSIPPGAFSPYRKLRRIDLSNNQI-AEIAPDAF--QGLRSLNSLVLYGNKITDLP 373
Query: 282 NYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKEL 341
L +L + L NKI+ + + F ++ + L + L +N ++ + TF +L+ +
Sbjct: 374 RGVFGGLYTLQLLLLNANKINCVRPDAFQ-DL-QNLSLLSLYDNKIQSLAKGTFTSLRAI 431
Query: 342 NTITLSYN 349
T+ L+ N
Sbjct: 432 QTLHLAQN 439
Score = 83 (34.3 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+I+ L +F+ L +L++++LS NK+ E+ F+ + L ++ + S
Sbjct: 550 NEISILEATGIFKKLTHLKKINLSNNKVS--EIEDGAFEGAASVSELHLTANQLESIRSG 607
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + L+ L L + NN I I N S L ++ ++L N+I+ I F
Sbjct: 608 MF---RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAF 657
Score = 59 (25.8 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
NKI + + F+ L NL LSL NK+Q L F +Q L ++ + F
Sbjct: 391 NKINCVRPDAFQDLQNLSLLSLYDNKIQ--SLAKGTFTSLRAIQTLHLAQNPF 441
Score = 58 (25.5 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 38/155 (24%), Positives = 64/155 (41%)
Query: 29 GTTI-LKGDQLQGIFNSKLRE---LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEE 84
G T+ G LQ I + R LE+ G ++ I + F + L++ QI
Sbjct: 42 GATVDCHGAGLQAIPKNIPRSTERLELNGNNITRIHKNDFVGLKQLR--VLQLMENQIGV 99
Query: 85 LPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN--VTKLQHLGTTILK-DREKXXXXX 141
+ G FD ++ +E+ L L+ N+L L +N +++L TI R+
Sbjct: 100 VERGAFDDMKELER--LRLNRNQLHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGAT 157
Query: 142 XXXXXRC--NKITDLNGNLFRHLQKSIVKAKKNNN 174
+ N+I+ + FR L+ V NNN
Sbjct: 158 DLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
>FB|FBgn0003255 [details] [associations]
symbol:rk "rickets" species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS;NAS]
[GO:0016021 "integral to membrane" evidence=IEA;ISS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA;ISS]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0008188
"neuropeptide receptor activity" evidence=ISS] [GO:0007564
"regulation of chitin-based cuticle tanning" evidence=IMP]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IMP]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0001837
InterPro:IPR025875 Pfam:PF12799 GO:GO:0016500 GO:GO:0008188
GeneTree:ENSGT00650000092962 KO:K08399 RefSeq:NP_476702.1
UniGene:Dm.6481 ProteinModelPortal:Q7KTA0 SMR:Q7KTA0 STRING:Q7KTA0
PRIDE:Q7KTA0 EnsemblMetazoa:FBtr0080610 GeneID:34819
KEGG:dme:Dmel_CG8930 UCSC:CG8930-RA CTD:34819 FlyBase:FBgn0003255
InParanoid:Q7KTA0 OMA:WLITRKT OrthoDB:EOG4FN2ZQ PhylomeDB:Q7KTA0
GenomeRNAi:34819 NextBio:790377 ArrayExpress:Q7KTA0 Bgee:Q7KTA0
GO:GO:0007564 Uniprot:Q7KTA0
Length = 1360
Score = 260 (96.6 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 104/370 (28%), Positives = 166/370 (44%)
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
Q SL N ++ L+ + +KL+ L + +LF P L L TLE L + +
Sbjct: 252 QLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFY--RIPTNAL-AGLRTLEALNLGS 308
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N + I + + +L + L+ N+I KI N+ LK + L +N + + +
Sbjct: 309 NLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALK-NL-TALKVLELDDNLISSLP-EG 365
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
L +L ++++ N L+ I T ML+ + N + I P AF + L KL L
Sbjct: 366 LSKLSQLQELSITSNRLRWINDTELPRSMQMLD--MRANPLSTISPGAFRGMSKLRKLIL 423
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
D + L F + + L L I + N +Q P +KSL+L N ++ +
Sbjct: 424 SDVR----TLRSFPELEACHALEILKLDRAGIQEVPANLCRQTP-RLKSLELKTNSLKRI 478
Query: 455 PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNL 514
P N L + D LR L L N+I+ + F L L L L +N I + + F G+P L
Sbjct: 479 P-N-LSSCRD-LRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKL 535
Query: 515 QIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIR 574
Q++DL NEIS + E F L LN+ +N LP + K ++N K+R
Sbjct: 536 QLLDLEGNEISYIHKEAFSGFTALEDLNLGNNIFPELPESGLRALLHLK---TFNNPKLR 592
Query: 575 --PGRESNPR 582
P ++ PR
Sbjct: 593 EFPPPDTFPR 602
Score = 174 (66.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 102/423 (24%), Positives = 174/423 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS-KLRELEITGKDLKFIDP 61
L LS + +L + N + LG L + F + L EL ++ + +DP
Sbjct: 161 LRLSCRGIGILAVPVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDP 220
Query: 62 SAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATLYSNV 120
+AF + L+L+ N ++ LP F + + Q+T L L+ N L L+ L ++
Sbjct: 221 NAFYGLAKLKRLSLQ--NCGLKSLPPQSF---QGLAQLTSLQLNGNALVSLDGDCL-GHL 274
Query: 121 TKLQHL---GTTILKDREKXXXXXXXXXXR---CNKITDLNGNLFRHLQKSIVKAKKNNN 174
KL+ L G + N +T +N F + IV K N
Sbjct: 275 QKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQ 334
Query: 175 NNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKL---------- 224
+ K N I+ L L + L LQELS++ N+L
Sbjct: 335 IMKISAGAL-KNLTALKVLELDDNLISSLPEGLSK-LSQLQELSITSNRLRWINDTELPR 392
Query: 225 --QIIELNSN--------VFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
Q++++ +N F KL+ L +S + FP + + LE L +D
Sbjct: 393 SMQMLDMRANPLSTISPGAFRGMSKLRKLILS-DVRTLRSFPEL---EACHALEILKLDR 448
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
I+ + L + L+ N + +I N + + L+ + LS+N +E I+
Sbjct: 449 AGIQEVPANLCRQTPRLKSLELKTNSLKRIPN----LSSCRDLRLLDLSSNQIEKIQGKP 504
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F LK+LN + LSYN +K++ +F+ + + + L N+I YI+ AF L L+L
Sbjct: 505 FNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNL 564
Query: 395 QDN 397
+N
Sbjct: 565 GNN 567
Score = 135 (52.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 57/257 (22%), Positives = 114/257 (44%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N+ + + L NN L +E+++F+ L +TLS N + ++ +F L + + L
Sbjct: 176 NLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQ 235
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
+K + P +F L L L L N L + + ++ +T L L N +
Sbjct: 236 NCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRT---LRLEGNLFYRIPT 292
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
N +++L+L +N + + + L L L N+I + A A NL L+
Sbjct: 293 NALAGLRT-LEALNLGSNLLTIINDEDFPRMPN-LIVLLLKRNQIMKISAGALKNLTALK 350
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
+L L+ N I+ + + + LQ + ++ N + + + S +++L++ N L ++
Sbjct: 351 VLELDDNLISSLPEG-LSKLSQLQELSITSNRLRWINDTELPRS--MQMLDMRANPLSTI 407
Query: 552 PRDVFSN-TIIEKLDIS 567
F + + KL +S
Sbjct: 408 SPGAFRGMSKLRKLILS 424
>UNIPROTKB|Q8IW52 [details] [associations]
symbol:SLITRK4 "SLIT and NTRK-like protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL080239 EMBL:CH471170 EMBL:BC040986
EMBL:AL713693 EMBL:AK057619 IPI:IPI00217146 RefSeq:NP_001171678.1
RefSeq:NP_001171679.1 RefSeq:NP_775101.1 UniGene:Hs.272284
ProteinModelPortal:Q8IW52 SMR:Q8IW52 PhosphoSite:Q8IW52
DMDM:46396931 PaxDb:Q8IW52 PRIDE:Q8IW52 DNASU:139065
Ensembl:ENST00000338017 Ensembl:ENST00000356928
Ensembl:ENST00000381779 GeneID:139065 KEGG:hsa:139065
UCSC:uc004fbx.3 CTD:139065 GeneCards:GC0XM142715 HGNC:HGNC:23502
HPA:HPA001039 MIM:300562 neXtProt:NX_Q8IW52 PharmGKB:PA134926932
InParanoid:Q8IW52 OMA:TVFVAFC OrthoDB:EOG4VHK5S PhylomeDB:Q8IW52
GenomeRNAi:139065 NextBio:83882 Bgee:Q8IW52 CleanEx:HS_SLITRK4
Genevestigator:Q8IW52 GermOnline:ENSG00000179542 Uniprot:Q8IW52
Length = 837
Score = 165 (63.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 60/211 (28%), Positives = 106/211 (50%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
K++ ++ N ++ ++ F + + L+ + L N + IK F NL N+ + L+ NQI+
Sbjct: 380 KKLHVNGNSIKDVDVSDFTDFEGLDLLHLGSNQITVIKGDVFHNLTNLRRLYLNGNQIER 439
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+YP F L NL L L+ N +K+ + F ++ + Q L L+NN + +L A
Sbjct: 440 LYPEIFSGLHNLQYLYLEYNLIKEISAGTFDSMPNLQL---LYLNNNLLKSLPVYIFSGA 496
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ L+L NN+ +PV+ + SL ++ L+ N D T +L L+L +E
Sbjct: 497 PL--ARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNP---WDCTC--DLVALKLW-VEK 548
Query: 498 NNIAVVVKR----TFIGMPNLQIIDLSFNEI 524
+ +VVK T + N+++ L NEI
Sbjct: 549 LSDGIVVKELKCETPVQFANIELKSLK-NEI 578
Score = 156 (60.0 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 48/160 (30%), Positives = 80/160 (50%)
Query: 413 KQTPMNLNLSNN-YITNLYE-NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
K P +L LS N N+ ++ P+ K L ++ N I++V V+ F + L L+
Sbjct: 349 KTHPSDLGLSVNCQEKNIQSMSELIPKPLNAKKLHVNGNSIKDVDVSDFTDF-EGLDLLH 407
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
L N+I + F NL L L L N I + F G+ NLQ + L +N I ++
Sbjct: 408 LGSNQITVIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEISAG 467
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
F L++L +++N L+SLP +FS + +L++ N+
Sbjct: 468 TFDSMPNLQLLYLNNNLLKSLPVYIFSGAPLARLNLRNNK 507
Score = 154 (59.3 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 275 NNIKNIRNYSLYNLTSLNY-----INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
NN NI LY T LN+ ++L NK+ I F + LK++ L+NN L++
Sbjct: 68 NNFLNI----LYPNTFLNFSHAVSLHLGNNKLQNIEGGAF-LGL-SALKQLHLNNNELKI 121
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ +DTF ++ L + YNL+K I+ +F L+ + ++L+ N I ++ N F +L
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF-RFASL 180
Query: 390 VKLDLQDNKLK 400
LD++ N+++
Sbjct: 181 THLDIRGNRIQ 191
Score = 151 (58.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 46/148 (31%), Positives = 72/148 (48%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
KNI++ S LN L N S ++ F + L + L +N + +I+ D F+N
Sbjct: 364 KNIQSMSELIPKPLNAKKLHVNGNSIKDVDVSDFTDFEGLDLLHLGSNQITVIKGDVFHN 423
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L L + L+ N ++ + F L+N+ + L +N IK I F ++PNL L L +N
Sbjct: 424 LTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEISAGTFDSMPNLQLLYLNNN 483
Query: 398 KLKDFNLNVFSNITSKQTPM-NLNLSNN 424
LK + +FS P+ LNL NN
Sbjct: 484 LLKSLPVYIFSG-----APLARLNLRNN 506
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 401 DFNLNV-FSNITSKQTPMNLNLSNNYITNLYENDKKQAP-IYIKSLDLSNNRIQEVPVNF 458
D +++V N+ S + N+ N ++Y ++ + P L+ NN + + N
Sbjct: 19 DSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFYHLNFQNNFLNILYPNT 78
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
F+ ++ L+L N++++++ AF L L+ L L +N + ++ TF+G+ NL+ +
Sbjct: 79 FLNFSHAV-SLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQ 137
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+N I + F KL++L ++ N + LP ++F + LDI N+
Sbjct: 138 ADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGNR 189
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/172 (25%), Positives = 83/172 (48%)
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343
S ++ ++ Y+N E K+S N + NN+L ++ +TF N +
Sbjct: 31 SCVSVENVLYVNCE--KVSVYRPNQLK-PPWSNFYHLNFQNNFLNILYPNTFLNFSHAVS 87
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N L++I+ +F L+ + + L+ N++K + + F+ + NL L N +K
Sbjct: 88 LHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIE 147
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
F+ + + L L++N I+ L +N + A + LD+ NRIQ++P
Sbjct: 148 RGAFNKLHKLKV---LILNDNLISFLPDNIFRFASL--THLDIRGNRIQKLP 194
Score = 132 (51.5 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 47/175 (26%), Positives = 76/175 (43%)
Query: 240 LQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN------- 292
L L I +L +S I + N ++++N N S+Y L
Sbjct: 3 LWLFLILSALISSTNADSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFY 62
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++N + N ++ ++ N F N + + L NN L+ IE F L L + L+ N LK
Sbjct: 63 HLNFQNNFLNILYPNTF-LNFSHAVS-LHLGNNKLQNIEGGAFLGLSALKQLHLNNNELK 120
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F + N+ + +N IKYI AF L L L L DN + N+F
Sbjct: 121 ILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF 175
Score = 103 (41.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 36/130 (27%), Positives = 71/130 (54%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ ++ G F L L++L L+ N+L+I L ++ F E L+ L+ ++L E
Sbjct: 93 NKLQNIEGGAFLGLSALKQLHLNNNELKI--LRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH--NNLFHFNIHK 315
+ NK L+ L+ L +++N I + + +++ SL ++++ N+I K+ L H
Sbjct: 151 F--NK-LHKLKVLILNDNLISFLPD-NIFRFASLTHLDIRGNRIQKLPYIGVLEHIG--- 203
Query: 316 RLKEIRLSNN 325
R+ E++L +N
Sbjct: 204 RVVELQLEDN 213
Score = 99 (39.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 30/103 (29%), Positives = 54/103 (52%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT + G++F +L NL+ L L+ N QI L +F LQ L + ++L
Sbjct: 411 NQITVIKGDVFHNLTNLRRLYLNGN--QIERLYPEIFSGLHNLQYLYLEYNLIKEISAGT 468
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
+ ++ L+ L ++NN +K++ Y +++ L +NL NK
Sbjct: 469 F---DSMPNLQLLYLNNNLLKSLPVY-IFSGAPLARLNLRNNK 507
Score = 81 (33.6 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 35/116 (30%), Positives = 49/116 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L N F + + L L NKLQ IE F L+ L + N+NE
Sbjct: 69 NFLNILYPNTFLNFSHAVSLHLGNNKLQNIE--GGAFLGLSALKQLHL-----NNNELKI 121
Query: 258 YILNK--NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+ + LE+L D N IK I + L L + L N IS + +N+F F
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRF 177
Score = 72 (30.4 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 37/161 (22%), Positives = 73/161 (45%)
Query: 10 LSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDA 69
+SV N+ LY N K+ ++ + +QL+ + S L L + P+ F N
Sbjct: 33 VSVENV--LYVNCEKV-----SVYRPNQLKPPW-SNFYHLNFQNNFLNILYPNTFLNFS- 83
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT- 128
+ ++L + N +++ + G F + ++Q L L++N+L +L T + + L++L
Sbjct: 84 -HAVSLHLGNNKLQNIEGGAFLGLSALKQ--LHLNNNELKILRADT-FLGIENLEYLQAD 139
Query: 129 -TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
++K E+ K+ LN NL L +I +
Sbjct: 140 YNLIKYIERGAFNKLHKL----KVLILNDNLISFLPDNIFR 176
>UNIPROTKB|F1NG27 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002756 "MyD88-independent toll-like receptor signaling
pathway" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0032722 "positive regulation of
chemokine production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA] [GO:0032760 "positive regulation of tumor
necrosis factor production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045356 "positive regulation of interferon-alpha
biosynthetic process" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:LNLGYNI EMBL:AADN02031435
IPI:IPI00590386 Ensembl:ENSGALT00000021952 Uniprot:F1NG27
Length = 900
Score = 257 (95.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 150/607 (24%), Positives = 256/607 (42%)
Query: 3 LDLSHNKLSVLNMATL--YSNVTKLQHLGTTILKGDQLQ-GIFNSK--LRELEITGKDLK 57
LD+SHN+L L+ L YSN+ L + G I+ +L+ G+ + L+ L++ L
Sbjct: 61 LDISHNQLKKLDPENLTEYSNLIYL-NAGYNIIS--KLKPGLCKNLPLLQILKLEHNQLH 117
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMA--- 114
+ F + C +LT I E+ + F +EN+ LDLSHN L N+
Sbjct: 118 ELPDGVFAS---CSNLTELNLGYNIIEVKNDPFKTLENLN--ILDLSHNHLKSANLGLQQ 172
Query: 115 --------TLYSN-VTKL-----QHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFR 160
LYSN +T+L + L T L + C GNLF
Sbjct: 173 QLKNLRELVLYSNQITELNKEDLKFLSNTSLNSLDLSSNPLKEFHTGCLHAI---GNLFG 229
Query: 161 HLQKSIVKAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSL 219
+ ++ + ++SD + N++T L G NL L+L
Sbjct: 230 LILNNVELGENRTKKLCTELSDTAIQNLSLSHVKLSHINRLT-LQG---LQGTNLTVLNL 285
Query: 220 SFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFPYYILNKNLNTLEWLAMDNNNIK 278
S N L +IE +S F KL+ L + + + N + +Y L+++ L + N+
Sbjct: 286 SKNSLSVIEDDS--FQWLSKLEYLNLEDNNIINVSSHLFY----GLSSITHLNLINSLTG 339
Query: 279 NIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL--SNNYLELIESDTFY 336
I ++S L L Y+ ++ N +I N+F + K LK + L N L+ I + TF
Sbjct: 340 KIEDFSFQWLHHLEYLIMDNNNFPRITTNMFT-GL-KNLKYLSLYNCNTNLQRITNKTFV 397
Query: 337 NL--KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY-IYPNAFVNLPNLVKLD 393
+L L + L+ + ++++ +F +L + + L N+I + + F L N+ +
Sbjct: 398 SLANSRLQVLNLTKTRISTVESEAFSSLGQLKILDLGLNEINQELTGHEFEGLNNIEYIY 457
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQ 452
L NK F + S + M + N NL + P+ + LD+SNN I
Sbjct: 458 LSYNKNVTLRSESFIFVPSLRKLMLRKVGCN---NLAISPSPFHPLRNLTVLDISNNNIA 514
Query: 453 EVPVNFLQTFADSLRKLYLDFNEIKHL--DATAFGNL----DV--LELLSLEHNNIAVVV 504
+ + + L L L N + L A G + DV L +L+L+ N +
Sbjct: 515 NIREDLFNGLHE-LDILNLQHNNLARLWKCANPGGPVLFLKDVPNLHILNLKSNGFDEIP 573
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI--IE 562
F G+ L+ +DL N +++L F L LN+ N + S+ +VF +
Sbjct: 574 VHVFKGLHQLKDLDLGSNNLNLLPATLFDDQTSLNTLNLQKNLITSVEENVFGPAFKSLR 633
Query: 563 KLDISYN 569
L++ +N
Sbjct: 634 TLEMDFN 640
Score = 224 (83.9 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 137/577 (23%), Positives = 233/577 (40%)
Query: 33 LKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFD 91
LK Q+ + L+I+ LK +DP +N+ +L L I +L GL
Sbjct: 45 LKLTQIPSDLPKNITGLDISHNQLKKLDP---ENLTEYSNLIYLNAGYNIISKLKPGLCK 101
Query: 92 KIENIEQMTLDLSHNKLSVL--NMATLYSNVTKLQHLGTTILK---DREKXXXXXXXXXX 146
+ ++ L L HN+L L + SN+T+L +LG I++ D K
Sbjct: 102 NLPLLQ--ILKLEHNQLHELPDGVFASCSNLTEL-NLGYNIIEVKNDPFKTLENLNILDL 158
Query: 147 RCNKITDLNGNL---FRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDL 203
N + N L ++L++ ++ + + N++ + N + +
Sbjct: 159 SHNHLKSANLGLQQQLKNLRELVLYSNQITELNKEDLKFLSNTSLNSLDLSS--NPLKEF 216
Query: 204 N-------GNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
+ GNLF + N EL + K EL+ + L L + S N
Sbjct: 217 HTGCLHAIGNLFGLILNNVELGENRTKKLCTELSDTAI---QNLSLSHVKLSHINRLTLQ 273
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ NL L + N++ I + S L+ L Y+NLE N I + ++LF + +
Sbjct: 274 G-LQGTNLTVLN---LSKNSLSVIEDDSFQWLSKLEYLNLEDNNIINVSSHLF-YGLSS- 327
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM--LNIVLSFNQ 374
+ + L N+ IE +F L L + + N I T F L N+ L++
Sbjct: 328 ITHLNLINSLTGKIEDFSFQWLHHLEYLIMDNNNFPRITTNMFTGLKNLKYLSLYNCNTN 387
Query: 375 IKYIYPNAFVNLPN--LVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLNLSNNYIT-NLY 430
++ I FV+L N L L+L ++ FS++ K + LN N +T + +
Sbjct: 388 LQRITNKTFVSLANSRLQVLNLTKTRISTVESEAFSSLGQLKILDLGLNEINQELTGHEF 447
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL---DFNEIKHLDATAFGNL 487
E IY+ N + +F+ F SLRKL L N + + + F L
Sbjct: 448 EGLNNIEYIYLSY----NKNVTLRSESFI--FVPSLRKLMLRKVGCNNLA-ISPSPFHPL 500
Query: 488 DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT------GEQFYFSF--KLR 539
L +L + +NNIA + + F G+ L I++L N ++ L G + L
Sbjct: 501 RNLTVLDISNNNIANIREDLFNGLHELDILNLQHNNLARLWKCANPGGPVLFLKDVPNLH 560
Query: 540 ILNISHNRLRSLPRDVFSNTI-IEKLDISYNQDKIRP 575
ILN+ N +P VF ++ LD+ N + P
Sbjct: 561 ILNLKSNGFDEIPVHVFKGLHQLKDLDLGSNNLNLLP 597
>UNIPROTKB|F1RZN4 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0032722 "positive
regulation of chemokine production" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 PANTHER:PTHR24365:SF5 EMBL:CU466336
Ensembl:ENSSSCT00000017206 Uniprot:F1RZN4
Length = 902
Score = 257 (95.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 142/597 (23%), Positives = 251/597 (42%)
Query: 2 TLDLSHNKLSVLNMATLYS----NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLK 57
TLD N +S L S + LQH + L IF L EL + ++
Sbjct: 80 TLDGGFNTISKLEPELCQSLPLLEILNLQHNELSQLSDKTF--IFCMNLIELHLMSNSIQ 137
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY 117
I + F N+ L L +L + L ++EN++++ L ++NK+S L
Sbjct: 138 KIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQL--QLENLQELLL--ANNKISALKRE--- 190
Query: 118 SNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNE 177
+L LG + LK E N+I + + F + K + NN
Sbjct: 191 ----ELDFLGNSSLKRLELSS----------NQIQEFSPGCFHAIGK-LFGLSLNNVKLS 235
Query: 178 DQVSDRE--KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFD 235
++++ + N + + + NL L LS N L +I +S +
Sbjct: 236 PSLTEKLCLELSNTSIENLSLSNAVQNQQHDFGLKQTNLSMLDLSHNSLSVIGNDSFAWL 295
Query: 236 VFEKLQLLEI-------SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
K LE S SL+ + Y L ++ T + +++ + + I ++S L
Sbjct: 296 PHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSF-TKQSISLAS--LPKIEDFSFQWL 352
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY--LELIESDTFYNLKE--LNTI 344
SL Y+N+E N I N F I +LK + LSN++ L + ++TF +L + L +
Sbjct: 353 KSLEYLNMEDNNFPGIKRNTFTGLI--KLKSLSLSNSFSSLRTLTNETFISLADSPLLIL 410
Query: 345 TLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI-KYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
L+ N + I++ +F L ++ + L N+I + + + L N+V++ L N+ +
Sbjct: 411 NLTKNKISKIESGAFSWLGHLKVLDLGLNEIGQELTGQEWRGLKNIVEVYLSYNRYLELT 470
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTF 462
+ F+ + S Q L L + N+ + P++ + LDLSNN I + L+
Sbjct: 471 TDSFALVPSLQ---QLMLRRVALRNMDCSPSPFHPLFNLTILDLSNNNIANINDELLKGL 527
Query: 463 ADSLRKLYLDFNEIKHL--DATAFG------NLDVLELLSLEHNNIAVVVKRTFIGMPNL 514
+ L+ L L N + L A G L L +L+LE N + F + L
Sbjct: 528 -EKLQILDLQHNNLARLWKHANPGGPVQFLKGLSHLHILNLESNGFDEIPADAFRDLSEL 586
Query: 515 QIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI--IEKLDISYN 569
+ IDL N +++L F L+ L++ N + S+ + VF + LD+ +N
Sbjct: 587 KSIDLGLNNLNILPPSVFDNQVSLKSLSLQKNLITSVKKTVFGPAFQKLSNLDMRFN 643
Score = 200 (75.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 77/295 (26%), Positives = 143/295 (48%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ +NL +N++ ++ +F I+ +L + N + +E + +L L + L +N
Sbjct: 53 NITVLNLTHNQLRRLPPA--NFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEILNLQHN 110
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L + +F N++ + L N I+ I N F NL NL+KLDL N L L
Sbjct: 111 ELSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQLQ 170
Query: 410 ITSKQTPMNLNLSNNYITNLYENDKK-QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
+ + Q L L+NN I+ L + +K L+LS+N+IQE F ++ K
Sbjct: 171 LENLQ---ELLLANNKISALKREELDFLGNSSLKRLELSSNQIQE----FSPGCFHAIGK 223
Query: 469 LY-LDFNEIKHLDATAFGNLDVLEL--LSLEHNNIAVVVKRT---F-IGMPNLQIIDLSF 521
L+ L N +K L + L LEL S+E+ +++ V+ F + NL ++DLS
Sbjct: 224 LFGLSLNNVK-LSPSLTEKL-CLELSNTSIENLSLSNAVQNQQHDFGLKQTNLSMLDLSH 281
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLP-RDVFSNTIIEKLDI--SYNQDKI 573
N +S++ + F + L+ + +N + L R ++ + ++ L++ S+ + I
Sbjct: 282 NSLSVIGNDSFAWLPHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSFTKQSI 336
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 253 (94.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 89/350 (25%), Positives = 165/350 (47%)
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
L S+ F LQ L +S S ++ + + +L L+ L + N I ++ L +
Sbjct: 65 LQSHSFSGMTVLQRLMLSDSHISAIDPGTF---NDLVKLKTLRLTRNKISHLPRAILDKM 121
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
L + L++N + + NLF ++ L+++ L+ N L + ++ F +L +L + LS
Sbjct: 122 VLLEQLFLDHNALRDLDQNLFQKLLN--LRDLCLNQNQLSFLPANLFSSLGKLKVLDLSR 179
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L + + ++L N++ + NL L +L L+ N L+ F
Sbjct: 180 NNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFD 239
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
++ + T L LS N + +L ++ L L N ++E+P A LR+
Sbjct: 240 SLGNLST---LTLSGNLLESLPPALFLHVS-WLTRLTLFENPLEELPEVLFGEMA-GLRE 294
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNNI-AVVVKRTFIGMPNLQIIDLSFNEISML 527
L+L+ ++ L A AF NL L+ L L N + + + F G+ L+++ + N + L
Sbjct: 295 LWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEEL 354
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQDKIRPG 576
+ +LR +++ HNRLR+LPR +F N + + + + +NQ K PG
Sbjct: 355 PEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPG 404
Score = 241 (89.9 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 85/327 (25%), Positives = 150/327 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI+ L + + L++L L N L+ +L+ N+F +LL + N N+ +
Sbjct: 108 NKISHLPRAILDKMVLLEQLFLDHNALR--DLDQNLFQ-----KLLNLRDLCLNQNQLSF 160
Query: 258 YILN--KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
N +L L+ L + NN+ ++ L L + L N++ + + L N+
Sbjct: 161 LPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLA-NLGA 219
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L E+RL N+L I F +L L+T+TLS NLL+S+ F +++ + + L N +
Sbjct: 220 -LTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPL 278
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + F + L +L L L+ F N++ QT L L+ N + +
Sbjct: 279 EELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQT---LGLTRNPLLSALPPGMF 335
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
++ L + N ++E+P + L+ LR++ L N ++ L T F NL L + L
Sbjct: 336 HGLTELRVLAVHTNALEELPEDALRGLG-RLRQVSLRHNRLRALPRTLFRNLSSLVTVQL 394
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFN 522
EHN + + F +P L + L N
Sbjct: 395 EHNQLKTLPGDVFAALPQLTRVLLGHN 421
Score = 222 (83.2 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 93/401 (23%), Positives = 181/401 (45%)
Query: 11 SVLNMATLY--SNVTK--LQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDN 66
SV ++A L +N+T L + +L+ G+ + L+ L ++ + IDP F++
Sbjct: 39 SVAHIAELGLPTNLTHILLFRMDRGVLQSHSFSGM--TVLQRLMLSDSHISAIDPGTFND 96
Query: 67 IDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ TL++T +I LP + DK+ +EQ+ LD HN L L+ L+ + L+ L
Sbjct: 97 LVKLK--TLRLTRNKISHLPRAILDKMVLLEQLFLD--HNALRDLDQ-NLFQKLLNLRDL 151
Query: 127 GTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKX 186
+ +++ K+ DL+ N HL + ++ A+ E + +
Sbjct: 152 --CLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKL---EKLLLYSNRL 206
Query: 187 XXXXXXXXXRCNKITDLNGNLFR-HLYNLQELSL-SFNKLQIIELNSNVFDVFEKLQLLE 244
+T+L L R HL ++ + S L + L+ N+ + L
Sbjct: 207 MSLDSGLLANLGALTELR--LERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLH 264
Query: 245 ISF----SLFNS--NEFPYYILNKNLNTLE-WLAMDNNNIKNIRNYSLYNLTSLNYINLE 297
+S+ +LF + E P + + E WL + +++ + + NL+ L + L
Sbjct: 265 VSWLTRLTLFENPLEELPEVLFGEMAGLRELWL--NGTHLRTLPAAAFRNLSGLQTLGLT 322
Query: 298 YNKI-SKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKT 356
N + S + +FH + + L+ + + N LE + D L L ++L +N L+++
Sbjct: 323 RNPLLSALPPGMFH-GLTE-LRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRALPR 380
Query: 357 TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
T F+NL++++ + L NQ+K + + F LP L ++ L N
Sbjct: 381 TLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRVLLGHN 421
Score = 215 (80.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 84/349 (24%), Positives = 158/349 (45%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS-NEFPYY 258
I+ ++ F L L+ L L+ NK+ L + D K+ LLE F N+ +
Sbjct: 86 ISAIDPGTFNDLVKLKTLRLTRNKIS--HLPRAILD---KMVLLEQLFLDHNALRDLDQN 140
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+ K LN L L ++ N + + +L L ++L N ++ + L I +L+
Sbjct: 141 LFQKLLN-LRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQI--KLE 197
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
++ L +N L ++S NL L + L N L+SI +F +L N+ + LS N ++ +
Sbjct: 198 KLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESL 257
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
P F+++ L +L L +N L++ +F + + L L+ ++ L +
Sbjct: 258 PPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLR---ELWLNGTHLRTLPAAAFRNLS 314
Query: 439 IYIKSLDLSNNRI-QEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+++L L+ N + +P + LR L + N ++ L A L L +SL H
Sbjct: 315 -GLQTLGLTRNPLLSALPPGMFHGLTE-LRVLAVHTNALEELPEDALRGLGRLRQVSLRH 372
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
N + + + F + +L + L N++ L G+ F +L + + HN
Sbjct: 373 NRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRVLLGHN 421
Score = 207 (77.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 92/356 (25%), Positives = 161/356 (45%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNK 262
L + F + LQ L LS + + I+ F+ KL+ L ++ + + P IL+K
Sbjct: 65 LQSHSFSGMTVLQRLMLSDSHISAID--PGTFNDLVKLKTLRLTRNKIS--HLPRAILDK 120
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+ LE L +D+N ++++ L +L + L N++S + NLF ++ K LK + L
Sbjct: 121 MV-LLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFS-SLGK-LKVLDL 177
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S N L + +L + L N L S+ + NL + + L N ++ I P A
Sbjct: 178 SRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGA 237
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F +L NL L L N L+ +F ++ S T L L N + L E + ++
Sbjct: 238 FDSLGNLSTLTLSGNLLESLPPALFLHV-SWLT--RLTLFENPLEELPEVLFGEMA-GLR 293
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI-KHLDATAFGNLDVLELLSLEHNNIA 501
L L+ ++ +P + + L+ L L N + L F L L +L++ N +
Sbjct: 294 ELWLNGTHLRTLPAAAFRNLS-GLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALE 352
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
+ + G+ L+ + L N + L F L + + HN+L++LP DVF+
Sbjct: 353 ELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFA 408
Score = 185 (70.2 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 63/230 (27%), Positives = 107/230 (46%)
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN-LP 387
+++S +F + L + LS + + +I +F +L + + L+ N+I ++ P A ++ +
Sbjct: 64 VLQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHL-PRAILDKMV 122
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
L +L L N L+D + N+F + + + +N N + NL+ + K +K LDL
Sbjct: 123 LLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGK-----LKVLDL 177
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
S N + +P L L KL L N + LD+ NL L L LE N++ +
Sbjct: 178 SRNNLTHLPQGLLGAQI-KLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPG 236
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
F + NL + LS N + L F L L + N L LP +F
Sbjct: 237 AFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLF 286
>ZFIN|ZDB-GENE-040219-12 [details] [associations]
symbol:tlr8b "toll-like receptor 8b" species:7955
"Danio rerio" [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0006955 "immune response" evidence=IEA]
[GO:0034154 "toll-like receptor 7 signaling pathway" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0002755 "MyD88-dependent
toll-like receptor signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR026880 PROSITE:PS51450
ZFIN:ZDB-GENE-040219-12 GO:GO:0006955 GO:GO:0003727
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051607 GO:GO:0002224 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00680000099674 PANTHER:PTHR24365:SF1 EMBL:CT583727
IPI:IPI00900186 Ensembl:ENSDART00000114208 OMA:SERIYPR
Uniprot:F1RET5
Length = 802
Score = 206 (77.6 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 85/293 (29%), Positives = 140/293 (47%)
Query: 262 KNL--NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN-NLFHFNIHKRLK 318
KNL NT L + NN I NI + +NL ++ +I+L N+I K H + F+ LK
Sbjct: 49 KNLIWNTTN-LNLANNKIHNISKDAFWNLNNVTWIDLRRNQIEKCHEKDNGVFSRLTNLK 107
Query: 319 EIRLSNNYLELIESDTFYNLKE-LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN + ++ NL L ++L+ N +KSI+ + FK + + VL N+ Y
Sbjct: 108 TLLLDNNKISVLPK----NLPAGLQWLSLNSNHIKSIEQSDFKGMTKLT--VLKLNKNCY 161
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNI--TSKQTPMNLNLSNNYITNLYENDKK 435
+A + + N LQ +L+ + N N+ +T NL+L N I +++E+D
Sbjct: 162 HNISAELTIQNETFQHLQLTELQ-LSKNGLHNVPFALPRTLHNLSLLLNRIDHVHESDLN 220
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+K LDLS N P+ F F + + N + AF L L+ L L
Sbjct: 221 HLT-RLKVLDLSGN----CPICFTTPFPCTSCQTN---NNALQIHPNAFSKLSQLQDLRL 272
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNE-ISMLTGEQFYFSF-KLRILNISHN 546
N++ + F + NL+ + LSFN IS QF+ ++ +++IS+N
Sbjct: 273 SGNSLQSINSMWFQNLTNLKYLYLSFNSLISEFESGQFFSVLPQVEVVDISYN 325
Score = 181 (68.8 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 70/283 (24%), Positives = 132/283 (46%)
Query: 306 NNLFHFNIH-----KRLKEIRLSNNYLELIESDT-FYNLKELNTITLSYNLLKSIKTTSF 359
NN++H N + + + LS+N++ + T F + +L + LS+N + ++
Sbjct: 468 NNIYHVNPPLFTGAENITCLNLSSNFIVSYFNGTEFAHFPKLKYLDLSHNRIYMHSDSAL 527
Query: 360 KNLNNMLNIVLSFNQIKYIYP---NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTP 416
L + + LS NQ + N L NL L + + + +N+ +N T +
Sbjct: 528 SELKALEVLDLSHNQHYFEVAGVRNCLTFLENLQFLKVLNLSWNE--INMLTNKTLQSDS 585
Query: 417 MN-LNLSNNYITNLYENDKKQAPIY-----IKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
+N L N + +++ + ++ + LD+S N++ E+P + F +LR +
Sbjct: 586 LNELQFQGNRLDIMWKKQRGYQSLFKSLSNLTYLDISYNKLSEIPDDIFDYFPKTLRYIS 645
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
+ N + +L LE L L N + VV ++ +L+++DLS N+IS L
Sbjct: 646 MSRNTLTDFAWEQLQSLPQLETLDLSKNKLRVVPRKLSKHTRSLKVLDLSHNQISKLR-Y 704
Query: 531 QFYFSFK-LRILNISHNRLRSLPRDVF---SNTIIEKLDISYN 569
F + K L+ILN ++N+L+ L F SN ++ LD+ N
Sbjct: 705 SFLENVKSLQILNFANNKLKHLGASSFTTGSNHQLQILDLQRN 747
Score = 180 (68.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 69/239 (28%), Positives = 120/239 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS--NVFDVFEKLQLLEISFSLFNSNEF 255
N+I + + L L+ L LS N+ E+ N E LQ L++ +L + NE
Sbjct: 517 NRIYMHSDSALSELKALEVLDLSHNQ-HYFEVAGVRNCLTFLENLQFLKV-LNL-SWNEI 573
Query: 256 PYYILNKNL--NTLEWLAMDNNNI----KNIRNY-SLY-NLTSLNYINLEYNKISKIHNN 307
+ NK L ++L L N + K R Y SL+ +L++L Y+++ YNK+S+I ++
Sbjct: 574 NM-LTNKTLQSDSLNELQFQGNRLDIMWKKQRGYQSLFKSLSNLTYLDISYNKLSEIPDD 632
Query: 308 LFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLN 367
+F + K L+ I +S N L + +L +L T+ LS N L+ + K+ ++
Sbjct: 633 IFDY-FPKTLRYISMSRNTLTDFAWEQLQSLPQLETLDLSKNKLRVVPRKLSKHTRSLKV 691
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
+ LS NQI + + N+ +L L+ +NKLK + F+ ++ Q + L+L N I
Sbjct: 692 LDLSHNQISKLRYSFLENVKSLQILNFANNKLKHLGASSFTTGSNHQLQI-LDLQRNPI 749
Score = 177 (67.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 123/562 (21%), Positives = 229/562 (40%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQ-IEELPSGLFDKIENIEQMTLD----- 102
L + + I AF N++ + L+ + E +G+F ++ N++ + LD
Sbjct: 58 LNLANNKIHNISKDAFWNLNNVTWIDLRRNQIEKCHEKDNGVFSRLTNLKTLLLDNNKIS 117
Query: 103 -LSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLN--GNLF 159
L N + L +L SN ++ + + K K N +L F
Sbjct: 118 VLPKNLPAGLQWLSLNSN--HIKSIEQSDFKGMTKLTVLKLNKNCYHNISAELTIQNETF 175
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSL 219
+HLQ + ++ KN +N R N+I ++ + HL L+ L L
Sbjct: 176 QHLQLTELQLSKNGLHNVPFALPR-----TLHNLSLLLNRIDHVHESDLNHLTRLKVLDL 230
Query: 220 SFN---------KLQIIELNSNVFDV----FEKL-QLLEISFSLFNSNEFPYYILNKNLN 265
S N + N+N + F KL QL ++ S NS + + +NL
Sbjct: 231 SGNCPICFTTPFPCTSCQTNNNALQIHPNAFSKLSQLQDLRLS-GNSLQSINSMWFQNLT 289
Query: 266 TLEWLAMDNNN-IKNIRNYSLYN-LTSLNYINLEYNKIS-KIHNNLFHFNIHKRLKEIRL 322
L++L + N+ I + ++ L + +++ YN S +I+ L RL+ ++
Sbjct: 290 NLKYLYLSFNSLISEFESGQFFSVLPQVEVVDISYNNPSERIYPRLKLSEGFSRLESLQT 349
Query: 323 SN--NYL--ELIESDT--FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
+ Y+ +L E D ++L+ L+ + L+ N L+ + + F+N +N+ I L N++
Sbjct: 350 LHLEGYIFHKLSEDDLRPLFSLRNLSVLNLAVNFLQQVNLSVFRNFHNLSLISLIDNRLT 409
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ P K +D+ D + + T+++ +Y
Sbjct: 410 FSSP--IRRWEGQSKSGFKDDNQGDHREGPYIH-TNEEF-------RHYPPFTKAECLAT 459
Query: 437 APIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEI-KHLDATAFGNLDVLELLS 494
P+ LDLS N I V P F T A+++ L L N I + + T F + L+ L
Sbjct: 460 GPV----LDLSRNNIYHVNPPLF--TGAENITCLNLSSNFIVSYFNGTEFAHFPKLKYLD 513
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISM-LTGEQFYFSFK-----LRILNISHNRL 548
L HN I + + L+++DLS N+ + G + +F L++LN+S N +
Sbjct: 514 LSHNRIYMHSDSALSELKALEVLDLSHNQHYFEVAGVRNCLTFLENLQFLKVLNLSWNEI 573
Query: 549 RSLPRDVFSNTIIEKLDISYNQ 570
L + + +L N+
Sbjct: 574 NMLTNKTLQSDSLNELQFQGNR 595
Score = 176 (67.0 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 99/383 (25%), Positives = 169/383 (44%)
Query: 199 KITDLNGNL---FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
K+ DL+GN F + + N LQI + N F +LQ L +S + S
Sbjct: 226 KVLDLSGNCPICFTTPFPCTSCQTNNNALQI---HPNAFSKLSQLQDLRLSGNSLQSINS 282
Query: 256 PYYILNKNLNTLEWLAMDNNN-IKNIRNYSLYN-LTSLNYINLEYNKIS-KIHNNLFHFN 312
++ +NL L++L + N+ I + ++ L + +++ YN S +I+ L
Sbjct: 283 MWF---QNLTNLKYLYLSFNSLISEFESGQFFSVLPQVEVVDISYNNPSERIYPRLKLSE 339
Query: 313 IHKRLKEIRLSN--NYL--ELIESDT--FYNLKELNTITLSYNLLKSIKTTSFKNLNNML 366
RL+ ++ + Y+ +L E D ++L+ L+ + L+ N L+ + + F+N +N+
Sbjct: 340 GFSRLESLQTLHLEGYIFHKLSEDDLRPLFSLRNLSVLNLAVNFLQQVNLSVFRNFHNLS 399
Query: 367 NIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN--VFSNITSKQTPMNLN---L 421
I L N++ + P K +D+ D + +N + P L
Sbjct: 400 LISLIDNRLTFSSP--IRRWEGQSKSGFKDDNQGDHREGPYIHTNEEFRHYPPFTKAECL 457
Query: 422 SNNYITNLYEND--KKQAPIY-----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF- 473
+ + +L N+ P++ I L+LS+N I N + FA + YLD
Sbjct: 458 ATGPVLDLSRNNIYHVNPPLFTGAENITCLNLSSNFIVSY-FNGTE-FAHFPKLKYLDLS 515
Query: 474 -NEI-KHLDATAFGNLDVLELLSLEHNN--IAVV-VKRTFIGMPNLQ---IIDLSFNEIS 525
N I H D+ A L LE+L L HN V V+ + NLQ +++LS+NEI+
Sbjct: 516 HNRIYMHSDS-ALSELKALEVLDLSHNQHYFEVAGVRNCLTFLENLQFLKVLNLSWNEIN 574
Query: 526 MLTGEQFYFSFKLRILNISHNRL 548
MLT + S L L NRL
Sbjct: 575 MLTNKTLQ-SDSLNELQFQGNRL 596
Score = 148 (57.2 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 61/224 (27%), Positives = 107/224 (47%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD-FNLNVFSNITSKQTPMNLNLSNNYITN 428
LS N I ++ P F N+ L+L N + FN F++ + L+LS+N I
Sbjct: 465 LSRNNIYHVNPPLFTGAENITCLNLSSNFIVSYFNGTEFAHFPKLKY---LDLSHNRIY- 520
Query: 429 LYENDKKQAPIYIKSLDLSNNR--IQEVPVNFLQTFADSL---RKLYLDFNEIKHLDATA 483
++ + ++ LDLS+N+ + V TF ++L + L L +NEI L
Sbjct: 521 MHSDSALSELKALEVLDLSHNQHYFEVAGVRNCLTFLENLQFLKVLNLSWNEINMLTNKT 580
Query: 484 FGNLDVLELLSLEHNNIAVVVKRT------FIGMPNLQIIDLSFNEISMLTGEQF-YFSF 536
+ D L L + N + ++ K+ F + NL +D+S+N++S + + F YF
Sbjct: 581 LQS-DSLNELQFQGNRLDIMWKKQRGYQSLFKSLSNLTYLDISYNKLSEIPDDIFDYFPK 639
Query: 537 KLRILNISHNRLRSLP-RDVFSNTIIEKLDISYNQDKIRPGRES 579
LR +++S N L + S +E LD+S N+ ++ P + S
Sbjct: 640 TLRYISMSRNTLTDFAWEQLQSLPQLETLDLSKNKLRVVPRKLS 683
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 91/326 (27%), Positives = 134/326 (41%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL NT L +K I ++N T+LN N NKI I + F +N++ + I
Sbjct: 29 NLSNTSVTLDCSERYLKKIPKNLIWNTTNLNLAN---NKIHNISKDAF-WNLNN-VTWID 83
Query: 322 LSNNYLELI-ESDT--FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLN-IVLSFNQIKY 377
L N +E E D F L L T+ L N + + KNL L + L+ N IK
Sbjct: 84 LRRNQIEKCHEKDNGVFSRLTNLKTLLLDNNKISVLP----KNLPAGLQWLSLNSNHIKS 139
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNV-FSNITSKQTPMN-LNLSNNYITNLYENDKK 435
I + F + L L L N + + + N T + + L LS N + N+
Sbjct: 140 IEQSDFKGMTKLTVLKLNKNCYHNISAELTIQNETFQHLQLTELQLSKNGLHNV----PF 195
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
P + +L L NRI V + L L+ L L N T F S
Sbjct: 196 ALPRTLHNLSLLLNRIDHVHESDLNHLT-RLKVLDLSGN-CPICFTTPF------PCTSC 247
Query: 496 EHNNIAVVVK-RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS-LPR 553
+ NN A+ + F + LQ + LS N + + F L+ L +S N L S
Sbjct: 248 QTNNNALQIHPNAFSKLSQLQDLRLSGNSLQSINSMWFQNLTNLKYLYLSFNSLISEFES 307
Query: 554 DVFSNTI--IEKLDISYNQ--DKIRP 575
F + + +E +DISYN ++I P
Sbjct: 308 GQFFSVLPQVEVVDISYNNPSERIYP 333
Score = 126 (49.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 74/335 (22%), Positives = 138/335 (41%)
Query: 3 LDLSHNKLSVLNMAT--LYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
+DL N++ + ++S +T L+ L K L + L+ L + +K I+
Sbjct: 82 IDLRRNQIEKCHEKDNGVFSRLTNLKTLLLDNNKISVLPKNLPAGLQWLSLNSNHIKSIE 141
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNV 120
S F + LK+ + + L I+N L L+ +LS + + +
Sbjct: 142 QSDFKGMTKL--TVLKLNKNCYHNISAEL--TIQNETFQHLQLTELQLSKNGLHNVPFAL 197
Query: 121 TKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQV 180
+ H + +L + R K+ DL+GN NNN Q+
Sbjct: 198 PRTLHNLSLLLNRIDHVHESDLNHLTRL-KVLDLSGNCPICFTTPFPCTSCQTNNNALQI 256
Query: 181 SDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN-VFDVFE 238
N + +N F++L NL+ L LSFN L I E S F V
Sbjct: 257 HPNAFSKLSQLQDLRLSGNSLQSINSMWFQNLTNLKYLYLSFNSL-ISEFESGQFFSVLP 315
Query: 239 KLQLLEISFSLFNSNEFPYYILNKN---LNTLEWLAMDNNNIKNIRNYSL---YNLTSLN 292
++++++IS++ + +P L++ L +L+ L ++ + L ++L +L+
Sbjct: 316 QVEVVDISYNNPSERIYPRLKLSEGFSRLESLQTLHLEGYIFHKLSEDDLRPLFSLRNLS 375
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
+NL N + +++ ++F N H L I L +N L
Sbjct: 376 VLNLAVNFLQQVNLSVFR-NFHN-LSLISLIDNRL 408
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 257 (95.5 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 99/363 (27%), Positives = 168/363 (46%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
++ L LS N+L SN + E L E+ + E PY+ + + L++
Sbjct: 75 DISSLDLSHNRL------SNWNNTLESQTLQEVKMNYNELTEIPYF--GEPTPNITLLSL 126
Query: 273 DNNNIKNIRNYSLYNLTS-LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+N I I N + L S L ++L N IS+I + F LK + LSNN + +E
Sbjct: 127 VHNLIPEI-NAEAFELYSALESLDLSSNIISEIKTSSFP---RMSLKYLNLSNNRISTLE 182
Query: 332 SDTFYNLKE-LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
+ F NL + L + L+ N + I FK L ++ + L N+IK + F L +L
Sbjct: 183 AGCFDNLSDSLLVVKLNRNRISMIPPKVFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLR 241
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
L +Q N + F + + + L L +N +T + + + ++ L +S N
Sbjct: 242 SLKMQRNGISKLKDGAFFGLNNME---ELELEHNNLTGVNKGWLYGLRM-LQQLYMSQNA 297
Query: 451 IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIG 510
I+++ + + F L +L L +N++ LD +AF L +LE L+L N + + F
Sbjct: 298 IEKISPDAWE-FCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRF 356
Query: 511 MPNLQIIDLSFNEISML---TGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDI 566
+ NLQ +DL N+IS E F L L + NR++S+ + F +E LD+
Sbjct: 357 LSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDL 416
Query: 567 SYN 569
+ N
Sbjct: 417 NNN 419
Score = 251 (93.4 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 92/340 (27%), Positives = 164/340 (48%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFN---SNEFPYYILNKNLNTLEW 269
N+ LSL N + E+N+ F+++ L+ L++S ++ + ++ FP +L++
Sbjct: 120 NITLLSLVHNLIP--EINAEAFELYSALESLDLSSNIISEIKTSSFPRM-------SLKY 170
Query: 270 LAMDNNNIKNIRNYSLYNLT-SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L + NN I + NL+ SL + L N+IS I +F H L+ + L N ++
Sbjct: 171 LNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFKLP-H--LQFLELKRNRIK 227
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
++E TF L L ++ + N + +K +F LNNM + L N + + L
Sbjct: 228 IVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRM 287
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L +L + N ++ + + + Q L+LS N +T L E+ + ++ L+L +
Sbjct: 288 LQQLYMSQNAIEKISPDAWEFC---QRLSELDLSYNQLTRLDESAFVGLSL-LERLNLGD 343
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHL--DAT-AFGNLDVLELLSLEHNNIAVVVK 505
NR+ + + F +L+ L L N+I DA+ AF L L L L+ N I V +
Sbjct: 344 NRVTHIADGVFR-FLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQ 402
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFS-FKLRILNIS 544
+ FIG+ +L+ +DL+ N I + F + K +LN S
Sbjct: 403 KAFIGLESLEYLDLNNNAIMSIQENAFSQTHLKGLVLNTS 442
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 80/284 (28%), Positives = 146/284 (51%)
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN-LKELNTITLS 347
+ ++ ++L +N++S +N L + L+E+++ NY EL E F + ++L
Sbjct: 74 SDISSLDLSHNRLSNWNNTLES----QTLQEVKM--NYNELTEIPYFGEPTPNITLLSLV 127
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+NL+ I +F+ + + ++ LS N I I ++F + +L L+L +N++ F
Sbjct: 128 HNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRM-SLKYLNLSNNRISTLEAGCF 186
Query: 408 SNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
N++ + LN N I+ + K P +++ L+L NRI+ V Q DSLR
Sbjct: 187 DNLSDSLLVVKLN--RNRISMIPPKVFK-LP-HLQFLELKRNRIKIVEGLTFQGL-DSLR 241
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L + N I L AF L+ +E L LEHNN+ V K G+ LQ + +S N I +
Sbjct: 242 SLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKI 301
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQ 570
+ + + F +L L++S+N+L L F +++E+L++ N+
Sbjct: 302 SPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNR 345
Score = 225 (84.3 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 81/291 (27%), Positives = 144/291 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I+++ + F + +L+ L+LS N++ +E + FD LL + + + P
Sbjct: 153 NIISEIKTSSFPRM-SLKYLNLSNNRISTLE--AGCFDNLSD-SLLVVKLNRNRISMIPP 208
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L L++L + N IK + + L SL + ++ N ISK+ + F F ++ +
Sbjct: 209 KVFK--LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAF-FGLNN-M 264
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+E+ L +N L + Y L+ L + +S N ++ I +++ + + LS+NQ+
Sbjct: 265 EELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTR 324
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ +AFV L L +L+L DN++ VF +++ QT L+L NN I+ E D +A
Sbjct: 325 LDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQT---LDLRNNDISWAIE-DASEA 380
Query: 438 PIYIKSLD---LSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAF 484
+KSL L NRI+ V F+ +SL L L+ N I + AF
Sbjct: 381 FSGLKSLTKLILQGNRIKSVTQKAFIGL--ESLEYLDLNNNAIMSIQENAF 429
Score = 187 (70.9 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 89/379 (23%), Positives = 159/379 (41%)
Query: 50 EITGKDLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
+I+ DL S ++N L +K+ ++ E+P + NI L L HN +
Sbjct: 75 DISSLDLSHNRLSNWNNTLESQTLQEVKMNYNELTEIPY-FGEPTPNIT--LLSLVHNLI 131
Query: 109 SVLNMAT--LYSNVTKLQHLGTTILKDREKXXX---XXXXXXXRCNKITDLNGNLFRHLQ 163
+N LYS + L L + I+ + + N+I+ L F +L
Sbjct: 132 PEINAEAFELYSALESLD-LSSNIISEIKTSSFPRMSLKYLNLSNNRISTLEAGCFDNLS 190
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
S++ K N N + + + N+I + G F+ L +L+ L + N
Sbjct: 191 DSLLVVKLNRNRIS-MIPPKVFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNG 249
Query: 224 LQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRN 282
+ +L F ++ LE+ + L N+ Y L L+ L M N I+ I
Sbjct: 250 IS--KLKDGAFFGLNNMEELELEHNNLTGVNKGWLY----GLRMLQQLYMSQNAIEKISP 303
Query: 283 YSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELN 342
+ L+ ++L YN+++++ + F + L+ + L +N + I F L L
Sbjct: 304 DAWEFCQRLSELDLSYNQLTRLDESAF-VGL-SLLERLNLGDNRVTHIADGVFRFLSNLQ 361
Query: 343 TITLSYNLLK-SIKTTS--FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
T+ L N + +I+ S F L ++ ++L N+IK + AF+ L +L LDL +N +
Sbjct: 362 TLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAI 421
Query: 400 KDFNLNVFSNITSKQTPMN 418
N FS K +N
Sbjct: 422 MSIQENAFSQTHLKGLVLN 440
Score = 155 (59.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 84/382 (21%), Positives = 169/382 (44%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDP 61
+LDLSHN+LS N TL S + + L G + L + + I+
Sbjct: 78 SLDLSHNRLSNWNN-TLESQTLQEVKMNYNELTEIPYFGEPTPNITLLSLVHNLIPEINA 136
Query: 62 SAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN-- 119
AF+ A L L +N I E+ + F ++ +++ L+LS+N++S L A + N
Sbjct: 137 EAFELYSALESLDLS-SNI-ISEIKTSSFPRM-SLKY--LNLSNNRISTLE-AGCFDNLS 190
Query: 120 ----VTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNN 175
V KL +++ + + N+I + G F+ L +++ K N
Sbjct: 191 DSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQGLDS--LRSLKMQRN 248
Query: 176 NEDQVSDREKXXXXXXXXXX-RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVF 234
++ D N +T +N L LQ+L +S N ++ +++ + +
Sbjct: 249 GISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIE--KISPDAW 306
Query: 235 DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYI 294
+ ++L L++S++ + ++ L+ LE L + +N + +I + L++L +
Sbjct: 307 EFCQRLSELDLSYNQLTRLDESAFV---GLSLLERLNLGDNRVTHIADGVFRFLSNLQTL 363
Query: 295 NLEYNKIS-KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
+L N IS I + F+ K L ++ L N ++ + F L+ L + L+ N + S
Sbjct: 364 DLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMS 423
Query: 354 IKTTSFKNLNNMLNIVLSFNQI 375
I+ +F ++ +VL+ + +
Sbjct: 424 IQENAFSQ-THLKGLVLNTSSL 444
Score = 134 (52.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 44/137 (32%), Positives = 71/137 (51%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGN-LDVLELLSLE 496
P I SLDLS+NR+ N L++ +L+++ +++NE+ + FG + LLSL
Sbjct: 73 PSDISSLDLSHNRLSNWN-NTLES--QTLQEVKMNYNELTEIPY--FGEPTPNITLLSLV 127
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
HN I + F L+ +DLS N IS + F L+ LN+S+NR+ +L F
Sbjct: 128 HNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFP-RMSLKYLNLSNNRISTLEAGCF 186
Query: 557 SNTIIEKLDISYNQDKI 573
N L + N+++I
Sbjct: 187 DNLSDSLLVVKLNRNRI 203
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
+L+LS+N ++N + Q ++ + ++ N + E+P + ++ L L N I
Sbjct: 78 SLDLSHNRLSNWNNTLESQT---LQEVKMNYNELTEIP--YFGEPTPNITLLSLVHNLIP 132
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF-YFSF 536
++A AF LE L L N I+ + +F M +L+ ++LS N IS L F S
Sbjct: 133 EINAEAFELYSALESLDLSSNIISEIKTSSFPRM-SLKYLNLSNNRISTLEAGCFDNLSD 191
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPG 576
L ++ ++ NR+ +P VF ++ L++ N+ KI G
Sbjct: 192 SLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEG 231
>UNIPROTKB|E1C125 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:AADN02013465 IPI:IPI00592627 RefSeq:XP_420266.3
Ensembl:ENSGALT00000011717 GeneID:422287 KEGG:gga:422287
Uniprot:E1C125
Length = 837
Score = 163 (62.4 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 60/211 (28%), Positives = 105/211 (49%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
K++ ++ NY++ +++ F + L+ + L N + +I+ F+NL N+ + L+ NQI+
Sbjct: 380 KKLHVNGNYIKDVDTADFTEFEGLDLLHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIER 439
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ P F L NL L L+ N +K+ F + + Q L L+NN + +L A
Sbjct: 440 LSPEMFAGLHNLQYLYLEYNVIKEILAGTFDLMPNLQL---LYLNNNLLRSLPAYIFAGA 496
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ L+L NN +PV+ + SL ++ L+ N D T +L L+L LE
Sbjct: 497 PL--ARLNLRNNHFMYLPVSGVLDQLKSLTQIDLEGNP---WDCTC--DLVALKLW-LEK 548
Query: 498 NNIAVVVKR----TFIGMPNLQIIDLSFNEI 524
+ +VVK T + N+++ L NEI
Sbjct: 549 LSEGIVVKELKCETPVQFANIELRSLK-NEI 578
Score = 158 (60.7 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 40/137 (29%), Positives = 72/137 (52%)
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNY-----INLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
W + N +N LY T LN+ + L NK+ I F + LK++ L+
Sbjct: 58 WSNFYHLNFQNNLLIILYPNTFLNFTHAVSLQLGNNKLQNIEGGAF-LGL-SALKQLHLN 115
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
NN L+++ +DTF ++ L + YNL+KSI+ +F L+ + ++L+ N I ++ N F
Sbjct: 116 NNELKILRADTFLGIENLEYLQADYNLIKSIERGAFNKLHKLKVLILNDNLISFLPDNIF 175
Query: 384 VNLPNLVKLDLQDNKLK 400
+L LD++ N+++
Sbjct: 176 -RFASLTHLDIRGNRIQ 191
Score = 150 (57.9 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 47/159 (29%), Positives = 74/159 (46%)
Query: 413 KQTPMNLNLSNNYITNLYEN--DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
K P +L LS N E+ + P+ K L ++ N I++V F + L L+
Sbjct: 349 KTHPSDLGLSVNCQERNIESMAELLPKPLNAKKLHVNGNYIKDVDTADFTEF-EGLDLLH 407
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
L N I + F NL L L L N I + F G+ NLQ + L +N I +
Sbjct: 408 LGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLSPEMFAGLHNLQYLYLEYNVIKEILAG 467
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N LRSLP +F+ + +L++ N
Sbjct: 468 TFDLMPNLQLLYLNNNLLRSLPAYIFAGAPLARLNLRNN 506
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 34/127 (26%), Positives = 65/127 (51%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L+ NN + + N F ++ L L N++++++ AF L L+ L L +N + ++
Sbjct: 64 LNFQNNLLIILYPNTFLNFTHAV-SLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKIL 122
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
TF+G+ NL+ + +N I + F KL++L ++ N + LP ++F +
Sbjct: 123 RADTFLGIENLEYLQADYNLIKSIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTH 182
Query: 564 LDISYNQ 570
LDI N+
Sbjct: 183 LDIRGNR 189
Score = 132 (51.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 45/178 (25%), Positives = 86/178 (48%)
Query: 284 SLYNLTSLNYINLE----Y--NKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
S ++ ++ Y+N E Y N++ +N +H N NN L ++ +TF N
Sbjct: 31 SCVSVENVLYVNCEKVAVYRPNQLKPPWSNFYHLNFQ---------NNLLIILYPNTFLN 81
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
++ L N L++I+ +F L+ + + L+ N++K + + F+ + NL L N
Sbjct: 82 FTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYN 141
Query: 398 KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
+K F+ + + L L++N I+ L +N + A + LD+ NRIQ++P
Sbjct: 142 LIKSIERGAFNKLHKLKV---LILNDNLISFLPDNIFRFASL--THLDIRGNRIQKLP 194
Score = 125 (49.1 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 38/140 (27%), Positives = 62/140 (44%)
Query: 311 FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
F + L + L +N + I + F NL L + L+ N ++ + F L+N+ + L
Sbjct: 397 FTEFEGLDLLHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLSPEMFAGLHNLQYLYL 456
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPM-NLNLSNNYITNL 429
+N IK I F +PNL L L +N L+ +F+ P+ LNL NN+ L
Sbjct: 457 EYNVIKEILAGTFDLMPNLQLLYLNNNLLRSLPAYIFAG-----APLARLNLRNNHFMYL 511
Query: 430 YENDKKQAPIYIKSLDLSNN 449
+ + +DL N
Sbjct: 512 PVSGVLDQLKSLTQIDLEGN 531
Score = 108 (43.1 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 38/159 (23%), Positives = 72/159 (45%)
Query: 197 CNKITDLNGNLFRHLY-NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
C K+ N + + N L+ N L II L N F F L++ + + E
Sbjct: 43 CEKVAVYRPNQLKPPWSNFYHLNFQ-NNLLII-LYPNTFLNFTHAVSLQLGNNKLQNIEG 100
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
++ L+ L+ L ++NN +K +R + + +L Y+ +YN I I F+ +HK
Sbjct: 101 GAFL---GLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKSIERGAFN-KLHK 156
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
LK + L++N + + D + L + + N ++ +
Sbjct: 157 -LKVLILNDNLISFLP-DNIFRFASLTHLDIRGNRIQKL 193
Score = 81 (33.6 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N + ++ N IK + F L L L N++ VF N+T+ + L L+
Sbjct: 378 NAKKLHVNGNYIKDVDTADFTEFEGLDLLHLGSNRISAIRGEVFRNLTNLR---RLYLNG 434
Query: 424 NYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT 482
N I L + + A ++ ++ L L N I+E+ + L+ LYL+ N ++ L A
Sbjct: 435 NQIERL--SPEMFAGLHNLQYLYLEYNVIKEILAGTFDLMPN-LQLLYLNNNLLRSLPAY 491
Query: 483 AFGNLDVLELLSLEHNNIAVV-VKRTFIGMPNLQIIDLSFN 522
F L L+L +N+ + V + +L IDL N
Sbjct: 492 IFAGAP-LARLNLRNNHFMYLPVSGVLDQLKSLTQIDLEGN 531
Score = 72 (30.4 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 36/167 (21%), Positives = 74/167 (44%)
Query: 4 DLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSA 63
D+S SV + ++ NV + + + +QL+ + S L L + P+
Sbjct: 21 DISVEICSVCSCVSV-ENVLYVNCEKVAVYRPNQLKPPW-SNFYHLNFQNNLLIILYPNT 78
Query: 64 FDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKL 123
F N + ++L++ N +++ + G F + ++Q L L++N+L +L T + + L
Sbjct: 79 FLNFT--HAVSLQLGNNKLQNIEGGAFLGLSALKQ--LHLNNNELKILRADT-FLGIENL 133
Query: 124 QHLGT--TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
++L ++K E+ K+ LN NL L +I +
Sbjct: 134 EYLQADYNLIKSIERGAFNKLHKL----KVLILNDNLISFLPDNIFR 176
>MGI|MGI:2442509 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2442509
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:139065 OrthoDB:EOG4VHK5S
EMBL:AB097573 EMBL:AK032263 EMBL:AK039763 EMBL:AK053065
IPI:IPI00396668 RefSeq:NP_848855.2 UniGene:Mm.101707
ProteinModelPortal:Q810B8 SMR:Q810B8 PhosphoSite:Q810B8
PaxDb:Q810B8 PRIDE:Q810B8 Ensembl:ENSMUST00000069926
Ensembl:ENSMUST00000114679 GeneID:245446 KEGG:mmu:245446
InParanoid:Q810B8 ChiTaRS:SLITRK4 NextBio:386707 Bgee:Q810B8
CleanEx:MM_SLITRK4 Genevestigator:Q810B8
GermOnline:ENSMUSG00000046699 Uniprot:Q810B8
Length = 837
Score = 168 (64.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 62/211 (29%), Positives = 104/211 (49%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
K++ ++ N ++ ++ F + L+ + L N + IK F NL N+ + L+ NQI+
Sbjct: 380 KKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITLIKGEVFHNLTNLRRLYLNGNQIER 439
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+YP F L NL L L+ N +K+ F ++ + Q L L+NN + +L A
Sbjct: 440 LYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQL---LYLNNNLLKSLPVYIFSGA 496
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ L+L NN+ +PV+ + SL ++ L+ N D T +L L+L LE
Sbjct: 497 PL--ARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNP---WDCTC--DLVALKLW-LEK 548
Query: 498 NNIAVVVKR----TFIGMPNLQIIDLSFNEI 524
N +VVK T + N+++ L NEI
Sbjct: 549 LNDGIVVKELKCETPVQFANIELKSLK-NEI 578
Score = 157 (60.3 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
NL +V + L + F +++N I ++ E K P+ K L
Sbjct: 325 NLSQIVSYQTRVPPLTPCPVPCFCKTHPSDLGLSVNCQEKNIQSMSELTPK--PLNAKKL 382
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
++ N I++V ++ F + L L+L N+I + F NL L L L N I +
Sbjct: 383 HVNGNNIKDVDISDFTEF-EGLDLLHLGSNQITLIKGEVFHNLTNLRRLYLNGNQIERLY 441
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKL 564
F G+ NLQ + L +N I + F L++L +++N L+SLP +FS + +L
Sbjct: 442 PEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAPLARL 501
Query: 565 DISYNQ 570
++ N+
Sbjct: 502 NLRNNK 507
Score = 152 (58.6 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 45/148 (30%), Positives = 72/148 (48%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
KNI++ S LN L N + ++ F + L + L +N + LI+ + F+N
Sbjct: 364 KNIQSMSELTPKPLNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITLIKGEVFHN 423
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L L + L+ N ++ + F L+N+ + L +N IK I F ++PNL L L +N
Sbjct: 424 LTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNN 483
Query: 398 KLKDFNLNVFSNITSKQTPM-NLNLSNN 424
LK + +FS P+ LNL NN
Sbjct: 484 LLKSLPVYIFSG-----APLARLNLRNN 506
Score = 151 (58.2 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 36/127 (28%), Positives = 69/127 (54%)
Query: 275 NNIKNIRNYSLY-NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
NN NI + + N + ++L NK+ I F + LK++ L+NN L+++ +D
Sbjct: 68 NNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAF-LGL-SALKQLHLNNNELKILRAD 125
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
TF ++ L + YNL+K I+ +F L+ + ++L+ N I ++ N F +L LD
Sbjct: 126 TFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF-RFASLTHLD 184
Query: 394 LQDNKLK 400
++ N+++
Sbjct: 185 IRGNRIQ 191
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 401 DFNLNV-FSNITSKQTPMNLNLSNNYITNLYENDKKQAP-IYIKSLDLSNNRIQEVPVNF 458
D +++V N+ S + N+ N ++Y ++ + P L+ NN + + N
Sbjct: 19 DSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFYHLNFQNNFLNILYPNT 78
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
F+ ++ L+L N++++++ AF L L+ L L +N + ++ TF+G+ NL+ +
Sbjct: 79 FVNFSHAV-SLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQ 137
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+N I + F KL++L ++ N + LP ++F + LDI N+
Sbjct: 138 ADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGNR 189
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/172 (25%), Positives = 83/172 (48%)
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343
S ++ ++ Y+N E K+S N + NN+L ++ +TF N +
Sbjct: 31 SCVSVENVLYVNCE--KVSVYRPNQLK-PPWSNFYHLNFQNNFLNILYPNTFVNFSHAVS 87
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N L++I+ +F L+ + + L+ N++K + + F+ + NL L N +K
Sbjct: 88 LHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIE 147
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
F+ + + L L++N I+ L +N + A + LD+ NRIQ++P
Sbjct: 148 RGAFNKLHKLKV---LILNDNLISFLPDNIFRFASL--THLDIRGNRIQKLP 194
Score = 131 (51.2 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 47/175 (26%), Positives = 76/175 (43%)
Query: 240 LQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN------- 292
L L I +L +S I + N ++++N N S+Y L
Sbjct: 3 LWLFLIVSALISSTNADSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFY 62
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++N + N ++ ++ N F N + + L NN L+ IE F L L + L+ N LK
Sbjct: 63 HLNFQNNFLNILYPNTF-VNFSHAVS-LHLGNNKLQNIEGGAFLGLSALKQLHLNNNELK 120
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F + N+ + +N IKYI AF L L L L DN + N+F
Sbjct: 121 ILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF 175
Score = 103 (41.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 36/130 (27%), Positives = 71/130 (54%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ ++ G F L L++L L+ N+L+I L ++ F E L+ L+ ++L E
Sbjct: 93 NKLQNIEGGAFLGLSALKQLHLNNNELKI--LRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH--NNLFHFNIHK 315
+ NK L+ L+ L +++N I + + +++ SL ++++ N+I K+ L H
Sbjct: 151 F--NK-LHKLKVLILNDNLISFLPD-NIFRFASLTHLDIRGNRIQKLPYIGVLEHIG--- 203
Query: 316 RLKEIRLSNN 325
R+ E++L +N
Sbjct: 204 RVVELQLEDN 213
Score = 99 (39.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 167 VKAKK---NNNNNED-QVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFN 222
+ AKK N NN +D +SD + N+IT + G +F +L NL+ L L+ N
Sbjct: 377 LNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGS-NQITLIKGEVFHNLTNLRRLYLNGN 435
Query: 223 KLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRN 282
QI L +F LQ L + ++L + ++ L+ L ++NN +K++
Sbjct: 436 --QIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTF---DSMPNLQLLYLNNNLLKSLPV 490
Query: 283 YSLYNLTSLNYINLEYNK 300
Y +++ L +NL NK
Sbjct: 491 Y-IFSGAPLARLNLRNNK 507
Score = 80 (33.2 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 35/116 (30%), Positives = 49/116 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L N F + + L L NKLQ IE F L+ L + N+NE
Sbjct: 69 NFLNILYPNTFVNFSHAVSLHLGNNKLQNIE--GGAFLGLSALKQLHL-----NNNELKI 121
Query: 258 YILNK--NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+ + LE+L D N IK I + L L + L N IS + +N+F F
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRF 177
Score = 73 (30.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 37/161 (22%), Positives = 73/161 (45%)
Query: 10 LSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDA 69
+SV N+ LY N K+ ++ + +QL+ + S L L + P+ F N
Sbjct: 33 VSVENV--LYVNCEKV-----SVYRPNQLKPPW-SNFYHLNFQNNFLNILYPNTFVNFS- 83
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT- 128
+ ++L + N +++ + G F + ++Q L L++N+L +L T + + L++L
Sbjct: 84 -HAVSLHLGNNKLQNIEGGAFLGLSALKQ--LHLNNNELKILRADT-FLGIENLEYLQAD 139
Query: 129 -TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
++K E+ K+ LN NL L +I +
Sbjct: 140 YNLIKYIERGAFNKLHKL----KVLILNDNLISFLPDNIFR 176
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 199 (75.1 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 83/299 (27%), Positives = 133/299 (44%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L +++N + + ++ L +L INL NKI ++ F + ++E+ L+ N LE
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAF--DGAASVQELMLTGNQLE 594
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F L L T+ L NL+ + +F L+++ + L N+I I P AF L +
Sbjct: 595 TVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L ++L N FN N K L I + N + Q P ++K + + +
Sbjct: 655 LSTINLLSNP---FNCNCHLAWLGKW------LRKRRIVS--GNPRCQKPFFLKEIPIQD 703
Query: 449 NRIQEVPVNFLQTFADSLRKLYLD----FNEI-----KHLDATAFGN-LDVLELLSLEHN 498
IQ+ + + + L + + K L A G DV EL LE N
Sbjct: 704 VAIQDFTCDGNEESSCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMPKDVTELY-LEGN 762
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
++ V R + +L +IDLS N ISMLT F L L +S+NRLR +P F+
Sbjct: 763 HLTAV-PRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFN 820
Score = 165 (63.1 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 80/323 (24%), Positives = 141/323 (43%)
Query: 274 NNNIKNIRNYSLYNLTS-----LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + + + I LE N I I F +K+LK I +S N +
Sbjct: 287 SNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAF--TQYKKLKRIDISKNQIS 344
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I D F LK L ++ L N + I F L ++ ++L+ N+I + N F +L N
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN-YITNLYENDKKQAPIYIKS--LD 445
L L L DNKL+ + +F+ + S QT L+L+ N ++ + + K Y++ ++
Sbjct: 405 LNLLSLYDNKLQTISKGLFAPLQSIQT---LHLAQNPFVCDCH---LKWLADYLQDNPIE 458
Query: 446 LSNNRIQEVPVNFLQTFADSLR--KLYLDFNEI--KHLDATAFGNLDVLELLSLEHNNIA 501
S R P ++ K +E + F +L E E I
Sbjct: 459 TSGARCSS-PRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCE-GTIV 516
Query: 502 VVVKRTFIGMPNL---QIIDLSFN--EISMLTGEQFYFSF-KLRILNISHNRLRSLPRDV 555
+ + +P+ + DL N E+S+L + LR +N+S+N+++ +
Sbjct: 517 DCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGA 576
Query: 556 FSNTI-IEKLDISYNQDKIRPGR 577
F +++L ++ NQ + GR
Sbjct: 577 FDGAASVQELMLTGNQLETVHGR 599
Score = 163 (62.4 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 74/319 (23%), Positives = 135/319 (42%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K L L + + NN IK +R + S+ + L N++ +H +F + LK +
Sbjct: 554 KKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFR-GL-SGLKTLM 611
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L +N + + +DTF L + ++L N + +I +F L ++ I L N N
Sbjct: 612 LRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPF-----N 666
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ----A 437
+L L K L+ ++ N K+ P+ ++ + E Q
Sbjct: 667 CNCHLAWLGKW-LRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNEESSCQLSPRC 725
Query: 438 PIYIKSLDL----SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA--FGNLDVLE 491
P ++ SN ++ +P + + +LYL+ N HL A L L
Sbjct: 726 PEQCTCMETVVRCSNKGLRALP----RGMPKDVTELYLEGN---HLTAVPRELSALRHLT 778
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L+ L +N+I+++ TF M +L + LS+N + + F LR+L + N + S+
Sbjct: 779 LIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 552 PRDVFSN-TIIEKLDISYN 569
P F++ T + L + N
Sbjct: 839 PEGSFNDLTSLSHLALGTN 857
Score = 162 (62.1 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 45/159 (28%), Positives = 82/159 (51%)
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
E L +D NNI I L +L ++LE N++S I F ++ K+L+ +RL+ N L
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQ-DL-KQLERLRLNKNKL 121
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+++ F + +L + LS N ++ I +F+ + ++ N+ L N I I AF L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALR 181
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
+L L L +N + + F+++ +T L L +N++
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRT---LRLHSNHL 217
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/164 (26%), Positives = 78/164 (47%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I + + + L N + I F LK L + L N + I+ +F++L + + L+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N+++ + F + P L +LDL +N+++ F IT + NL L NN+I+ + E+
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVK---NLQLDNNHISCI-ED 174
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+A ++ L L+NN I + V +R L L N +
Sbjct: 175 GAFRALRDLEILTLNNNNISRILVTSFNHMP-KIRTLRLHSNHL 217
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 41/161 (25%), Positives = 79/161 (49%)
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
N +LDL N + F+ + + + L+L +N ++ + E Q ++ L L+
Sbjct: 62 NAERLDLDRNNITRITKMDFAGLKNLRV---LHLEDNQVS-VIERGAFQDLKQLERLRLN 117
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
N++Q +P Q+ L +L L N+I+ + AF + ++ L L++N+I+ +
Sbjct: 118 KNKLQVLPELLFQS-TPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGA 176
Query: 508 FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F + +L+I+ L+ N IS + F K+R L + N L
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 124 (48.7 bits), Expect = 0.00086, P = 0.00086
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
E L L+ NNI + K F G+ NL+++ L N++S++ F +L L ++ N+L+
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 551 LPRDVFSNTI-IEKLDISYNQ 570
LP +F +T + +LD+S NQ
Sbjct: 124 LPELLFQSTPKLTRLDLSENQ 144
Score = 120 (47.3 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
LE N ++ + L + + L I LSNN + ++ + TF N+ L+T+ LSYN L+ I
Sbjct: 759 LEGNHLTAVPREL---SALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIP 815
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
+F L ++ + L N I + +F +L +L L L N L
Sbjct: 816 VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 118 (46.6 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y+ L L++N + + + +LRK+ L N+IK + AF G V EL+ L
Sbjct: 531 PEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELM-LT 589
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + V R F G+ L+ + L N I ++ + F +R+L++ NR+ ++ F
Sbjct: 590 GNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 649
Query: 557 SNTI 560
+ +
Sbjct: 650 TTLV 653
Score = 117 (46.2 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L L +++N + I + +L L + L NK+ + LF +L + LS
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQST--PKLTRLDLS 141
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N ++ I F + ++ + L N + I+ +F+ L ++ + L+ N I I +F
Sbjct: 142 ENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSF 201
Query: 384 VNLPNLVKLDLQDNKL 399
++P + L L N L
Sbjct: 202 NHMPKIRTLRLHSNHL 217
Score = 109 (43.4 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+++ + F+ L L+ L L+ NKLQ++ EL +F KL L++S + P
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL---LFQSTPKLTRLDLSENQIQG--IP 149
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ + ++ L +DNN+I I + + L L + L N IS+I + FN +
Sbjct: 150 RKAF-RGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL--VTSFNHMPK 206
Query: 317 LKEIRLSNNYL 327
++ +RL +N+L
Sbjct: 207 IRTLRLHSNHL 217
Score = 96 (38.9 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
+ ++ N+IK I + L I++ N+IS I + F + K L + L N +
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQ-GL-KSLTSLVLYGNKITE 369
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
I F L L + L+ N + ++ +F++L N+ + L N+++ I F L ++
Sbjct: 370 IVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSI 429
Query: 390 VKLDLQDN 397
L L N
Sbjct: 430 QTLHLAQN 437
Score = 92 (37.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L L N++T + + A ++ +DLSNN I + N+ + L L L +N ++
Sbjct: 757 LYLEGNHLTAVPR--ELSALRHLTLIDLSNNSISML-TNYTFSNMSHLSTLILSYNRLRC 813
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
+ AF L L +L+L N+I+ V + +F + +L + L N +
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 84 (34.6 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 30/113 (26%), Positives = 60/113 (53%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+++ L +F+ L NL++++LS NK++ E+ FD +Q L ++ N E
Sbjct: 542 NEVSVLEATGIFKKLPNLRKINLSNNKIK--EVREGAFDGAASVQELMLTG---NQLETV 596
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + + L+ L+ L + +N I + N + L+S+ ++L N+I+ I F
Sbjct: 597 HGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 649
Score = 82 (33.9 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 30/102 (29%), Positives = 45/102 (44%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N+I+D+ + F+ L KS+ N + V NKI L N F
Sbjct: 341 NQISDIAPDAFQGL-KSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTF 399
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
+ L NL LSL NKLQ I + +F + +Q L ++ + F
Sbjct: 400 QDLQNLNLLSLYDNKLQTI--SKGLFAPLQSIQTLHLAQNPF 439
Score = 81 (33.6 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KL+ ++I+ + I P AF + + L L +I E+ GLFD + ++ Q+ L L+
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLY--GNKITEIVKGLFDGLVSL-QLLL-LN 387
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
NK++ L + T LQ+L L D +
Sbjct: 388 ANKINCLRVNTFQD----LQNLNLLSLYDNK 414
Score = 77 (32.2 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 32/127 (25%), Positives = 64/127 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL-QGIFNS--KLRELEITGKDLKFI 59
L L N++SV+ + ++ +L+ L K L + +F S KL L+++ ++ I
Sbjct: 90 LHLEDNQVSVIERGA-FQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGI 148
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
AF I +L L N I + G F + ++E +TL+ +N +S + + T +++
Sbjct: 149 PRKAFRGITDVKNLQLD--NNHISCIEDGAFRALRDLEILTLN--NNNISRI-LVTSFNH 203
Query: 120 VTKLQHL 126
+ K++ L
Sbjct: 204 MPKIRTL 210
Score = 72 (30.4 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I + F L+ + +S N QI ++ D F+ L+ L S L+ N+
Sbjct: 317 NSIKAIPAGAFTQYKKLKRIDISKN--QISDIAP---DAFQGLKSLT-SLVLYG-NKITE 369
Query: 258 YI--LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ L L +L+ L ++ N I +R + +L +LN ++L NK+ I LF
Sbjct: 370 IVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Score = 69 (29.3 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI ++ F ++QEL L+ N+L+ + + VF L+ L + +L
Sbjct: 567 NKIKEVREGAFDGAASVQELMLTGNQLETV--HGRVFRGLSGLKTLMLRSNLIGCVSNDT 624
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
+ L+++ L++ +N I I + L SL+ INL N
Sbjct: 625 FA---GLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 59 (25.8 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS--NVTKLQHLG---TT 129
+++ I+ +P+G F + + +++ +D+S N++S + ++T L G T
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKR--IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 130 ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
I+K NKI L N F+ LQ
Sbjct: 370 IVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 403
Score = 56 (24.8 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 24/108 (22%), Positives = 50/108 (46%)
Query: 3 LDLSHN---KLSVLNMATLYS-NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
LDL N +++ ++ A L + V L+ ++++ Q + +L L + L+
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDL--KQLERLRLNKNKLQV 123
Query: 59 IDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
+ F + LT L ++ QI+ +P F I +++ + LD +H
Sbjct: 124 LPELLFQSTPK---LTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNH 168
Score = 52 (23.4 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 23/110 (20%), Positives = 56/110 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+D+S N++S + L+ L + +L G+++ +G+F+ L+ L + +
Sbjct: 336 IDISKNQISDIAPDAFQG----LKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKI 391
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
+ + F ++ +L L + + +++ + GLF +++I+ TL L+ N
Sbjct: 392 NCLRVNTFQDLQNL-NL-LSLYDNKLQTISKGLFAPLQSIQ--TLHLAQN 437
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 199 (75.1 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 83/299 (27%), Positives = 133/299 (44%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L +++N + + ++ L +L INL NKI ++ F + ++E+ L+ N LE
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAF--DGAASVQELMLTGNQLE 594
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F L L T+ L NL+ + +F L+++ + L N+I I P AF L +
Sbjct: 595 TVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L ++L N FN N K L I + N + Q P ++K + + +
Sbjct: 655 LSTINLLSNP---FNCNCHLAWLGKW------LRKRRIVS--GNPRCQKPFFLKEIPIQD 703
Query: 449 NRIQEVPVNFLQTFADSLRKLYLD----FNEI-----KHLDATAFGN-LDVLELLSLEHN 498
IQ+ + + + L + + K L A G DV EL LE N
Sbjct: 704 VAIQDFTCDGNEESSCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMPKDVTELY-LEGN 762
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
++ V R + +L +IDLS N ISMLT F L L +S+NRLR +P F+
Sbjct: 763 HLTAV-PRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFN 820
Score = 165 (63.1 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 80/323 (24%), Positives = 141/323 (43%)
Query: 274 NNNIKNIRNYSLYNLTS-----LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + + + I LE N I I F +K+LK I +S N +
Sbjct: 287 SNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAF--TQYKKLKRIDISKNQIS 344
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I D F LK L ++ L N + I F L ++ ++L+ N+I + N F +L N
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN-YITNLYENDKKQAPIYIKS--LD 445
L L L DNKL+ + +F+ + S QT L+L+ N ++ + + K Y++ ++
Sbjct: 405 LNLLSLYDNKLQTISKGLFAPLQSIQT---LHLAQNPFVCDCH---LKWLADYLQDNPIE 458
Query: 446 LSNNRIQEVPVNFLQTFADSLR--KLYLDFNEI--KHLDATAFGNLDVLELLSLEHNNIA 501
S R P ++ K +E + F +L E E I
Sbjct: 459 TSGARCSS-PRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCE-GTIV 516
Query: 502 VVVKRTFIGMPNL---QIIDLSFN--EISMLTGEQFYFSF-KLRILNISHNRLRSLPRDV 555
+ + +P+ + DL N E+S+L + LR +N+S+N+++ +
Sbjct: 517 DCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGA 576
Query: 556 FSNTI-IEKLDISYNQDKIRPGR 577
F +++L ++ NQ + GR
Sbjct: 577 FDGAASVQELMLTGNQLETVHGR 599
Score = 163 (62.4 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 74/319 (23%), Positives = 135/319 (42%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K L L + + NN IK +R + S+ + L N++ +H +F + LK +
Sbjct: 554 KKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFR-GL-SGLKTLM 611
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L +N + + +DTF L + ++L N + +I +F L ++ I L N N
Sbjct: 612 LRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPF-----N 666
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ----A 437
+L L K L+ ++ N K+ P+ ++ + E Q
Sbjct: 667 CNCHLAWLGKW-LRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNEESSCQLSPRC 725
Query: 438 PIYIKSLDL----SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA--FGNLDVLE 491
P ++ SN ++ +P + + +LYL+ N HL A L L
Sbjct: 726 PEQCTCMETVVRCSNKGLRALP----RGMPKDVTELYLEGN---HLTAVPRELSALRHLT 778
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L+ L +N+I+++ TF M +L + LS+N + + F LR+L + N + S+
Sbjct: 779 LIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 552 PRDVFSN-TIIEKLDISYN 569
P F++ T + L + N
Sbjct: 839 PEGSFNDLTSLSHLALGTN 857
Score = 162 (62.1 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 45/159 (28%), Positives = 82/159 (51%)
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
E L +D NNI I L +L ++LE N++S I F ++ K+L+ +RL+ N L
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQ-DL-KQLERLRLNKNKL 121
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+++ F + +L + LS N ++ I +F+ + ++ N+ L N I I AF L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALR 181
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
+L L L +N + + F+++ +T L L +N++
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRT---LRLHSNHL 217
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/164 (26%), Positives = 78/164 (47%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I + + + L N + I F LK L + L N + I+ +F++L + + L+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N+++ + F + P L +LDL +N+++ F IT + NL L NN+I+ + E+
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVK---NLQLDNNHISCI-ED 174
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+A ++ L L+NN I + V +R L L N +
Sbjct: 175 GAFRALRDLEILTLNNNNISRILVTSFNHMP-KIRTLRLHSNHL 217
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 41/161 (25%), Positives = 79/161 (49%)
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
N +LDL N + F+ + + + L+L +N ++ + E Q ++ L L+
Sbjct: 62 NAERLDLDRNNITRITKMDFAGLKNLRV---LHLEDNQVS-VIERGAFQDLKQLERLRLN 117
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
N++Q +P Q+ L +L L N+I+ + AF + ++ L L++N+I+ +
Sbjct: 118 KNKLQVLPELLFQS-TPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGA 176
Query: 508 FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F + +L+I+ L+ N IS + F K+R L + N L
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 124 (48.7 bits), Expect = 0.00086, P = 0.00086
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
E L L+ NNI + K F G+ NL+++ L N++S++ F +L L ++ N+L+
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 551 LPRDVFSNTI-IEKLDISYNQ 570
LP +F +T + +LD+S NQ
Sbjct: 124 LPELLFQSTPKLTRLDLSENQ 144
Score = 120 (47.3 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
LE N ++ + L + + L I LSNN + ++ + TF N+ L+T+ LSYN L+ I
Sbjct: 759 LEGNHLTAVPREL---SALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIP 815
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
+F L ++ + L N I + +F +L +L L L N L
Sbjct: 816 VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 118 (46.6 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y+ L L++N + + + +LRK+ L N+IK + AF G V EL+ L
Sbjct: 531 PEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELM-LT 589
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + V R F G+ L+ + L N I ++ + F +R+L++ NR+ ++ F
Sbjct: 590 GNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 649
Query: 557 SNTI 560
+ +
Sbjct: 650 TTLV 653
Score = 117 (46.2 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L L +++N + I + +L L + L NK+ + LF +L + LS
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQST--PKLTRLDLS 141
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N ++ I F + ++ + L N + I+ +F+ L ++ + L+ N I I +F
Sbjct: 142 ENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSF 201
Query: 384 VNLPNLVKLDLQDNKL 399
++P + L L N L
Sbjct: 202 NHMPKIRTLRLHSNHL 217
Score = 109 (43.4 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+++ + F+ L L+ L L+ NKLQ++ EL +F KL L++S + P
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL---LFQSTPKLTRLDLSENQIQG--IP 149
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ + ++ L +DNN+I I + + L L + L N IS+I + FN +
Sbjct: 150 RKAF-RGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL--VTSFNHMPK 206
Query: 317 LKEIRLSNNYL 327
++ +RL +N+L
Sbjct: 207 IRTLRLHSNHL 217
Score = 96 (38.9 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
+ ++ N+IK I + L I++ N+IS I + F + K L + L N +
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQ-GL-KSLTSLVLYGNKITE 369
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
I F L L + L+ N + ++ +F++L N+ + L N+++ I F L ++
Sbjct: 370 IVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSI 429
Query: 390 VKLDLQDN 397
L L N
Sbjct: 430 QTLHLAQN 437
Score = 92 (37.4 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L L N++T + + A ++ +DLSNN I + N+ + L L L +N ++
Sbjct: 757 LYLEGNHLTAVPR--ELSALRHLTLIDLSNNSISML-TNYTFSNMSHLSTLILSYNRLRC 813
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
+ AF L L +L+L N+I+ V + +F + +L + L N +
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 84 (34.6 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 30/113 (26%), Positives = 60/113 (53%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+++ L +F+ L NL++++LS NK++ E+ FD +Q L ++ N E
Sbjct: 542 NEVSVLEATGIFKKLPNLRKINLSNNKIK--EVREGAFDGAASVQELMLTG---NQLETV 596
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + + L+ L+ L + +N I + N + L+S+ ++L N+I+ I F
Sbjct: 597 HGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 649
Score = 82 (33.9 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 30/102 (29%), Positives = 45/102 (44%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N+I+D+ + F+ L KS+ N + V NKI L N F
Sbjct: 341 NQISDIAPDAFQGL-KSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTF 399
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
+ L NL LSL NKLQ I + +F + +Q L ++ + F
Sbjct: 400 QDLQNLNLLSLYDNKLQTI--SKGLFAPLQSIQTLHLAQNPF 439
Score = 81 (33.6 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KL+ ++I+ + I P AF + + L L +I E+ GLFD + ++ Q+ L L+
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLY--GNKITEIVKGLFDGLVSL-QLLL-LN 387
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
NK++ L + T LQ+L L D +
Sbjct: 388 ANKINCLRVNTFQD----LQNLNLLSLYDNK 414
Score = 77 (32.2 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 32/127 (25%), Positives = 64/127 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL-QGIFNS--KLRELEITGKDLKFI 59
L L N++SV+ + ++ +L+ L K L + +F S KL L+++ ++ I
Sbjct: 90 LHLEDNQVSVIERGA-FQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGI 148
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
AF I +L L N I + G F + ++E +TL+ +N +S + + T +++
Sbjct: 149 PRKAFRGITDVKNLQLD--NNHISCIEDGAFRALRDLEILTLN--NNNISRI-LVTSFNH 203
Query: 120 VTKLQHL 126
+ K++ L
Sbjct: 204 MPKIRTL 210
Score = 72 (30.4 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I + F L+ + +S N QI ++ D F+ L+ L S L+ N+
Sbjct: 317 NSIKAIPAGAFTQYKKLKRIDISKN--QISDIAP---DAFQGLKSLT-SLVLYG-NKITE 369
Query: 258 YI--LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ L L +L+ L ++ N I +R + +L +LN ++L NK+ I LF
Sbjct: 370 IVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Score = 69 (29.3 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI ++ F ++QEL L+ N+L+ + + VF L+ L + +L
Sbjct: 567 NKIKEVREGAFDGAASVQELMLTGNQLETV--HGRVFRGLSGLKTLMLRSNLIGCVSNDT 624
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
+ L+++ L++ +N I I + L SL+ INL N
Sbjct: 625 FA---GLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 59 (25.8 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS--NVTKLQHLG---TT 129
+++ I+ +P+G F + + +++ +D+S N++S + ++T L G T
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKR--IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 130 ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
I+K NKI L N F+ LQ
Sbjct: 370 IVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 403
Score = 56 (24.8 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 24/108 (22%), Positives = 50/108 (46%)
Query: 3 LDLSHN---KLSVLNMATLYS-NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
LDL N +++ ++ A L + V L+ ++++ Q + +L L + L+
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDL--KQLERLRLNKNKLQV 123
Query: 59 IDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
+ F + LT L ++ QI+ +P F I +++ + LD +H
Sbjct: 124 LPELLFQSTPK---LTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNH 168
Score = 52 (23.4 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 23/110 (20%), Positives = 56/110 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+D+S N++S + L+ L + +L G+++ +G+F+ L+ L + +
Sbjct: 336 IDISKNQISDIAPDAFQG----LKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKI 391
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
+ + F ++ +L L + + +++ + GLF +++I+ TL L+ N
Sbjct: 392 NCLRVNTFQDLQNL-NL-LSLYDNKLQTISKGLFAPLQSIQ--TLHLAQN 437
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 255 (94.8 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 93/328 (28%), Positives = 158/328 (48%)
Query: 245 ISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI 304
+ S + +E P I N NT L + +N I++I L L +++ N I I
Sbjct: 36 VDCSSLDLSEIPTTIPN---NT-RILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHI 91
Query: 305 HNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNN 364
F +N+ LK + + N L I + + L L + L NL+ ++ + L
Sbjct: 92 DFEFF-YNL-PNLKILNIRKNRLARIPRGS-HELGHLEKLDLRSNLISTVTSEELSYLAA 148
Query: 365 MLNIVLSFNQIKYI-YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
+ ++ LS N I Y+ P + N+ KLDL N + D + FS+ T + L L+
Sbjct: 149 VRSVDLSRNLISYLPKPTTSAKV-NIEKLDLASNSITDIGTDHFSSFN---TLVTLKLAR 204
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQ-TFADSLRKLYLDFNEIKHLDAT 482
N+IT L + + ++SLDL+ N I+EV FL SL+ + L N++ LD
Sbjct: 205 NHITTLNQFSFSRLR-KLESLDLTRNMIREV--RFLAFNQLPSLQNVSLARNDVYRLDDG 261
Query: 483 AFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILN 542
F + L+ L+L N + V + G+ +L+++DLS+N+I + + KL+ L+
Sbjct: 262 MFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLS 321
Query: 543 ISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ NR++SLP F +E+L +S N
Sbjct: 322 LHSNRIQSLPSGSFRVLRQLEELILSAN 349
Score = 250 (93.1 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 77/250 (30%), Positives = 127/250 (50%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS+N +E I+ L T+ +S N+++ I F NL N+ + + N++ I P
Sbjct: 59 LSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLARI-PR 117
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
L +L KLDL+ N + S + + ++ ++LS N I+ L A + I
Sbjct: 118 GSHELGHLEKLDLRSNLISTVTSEELSYLAAVRS---VDLSRNLISYL-PKPTTSAKVNI 173
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+ LDL++N I ++ + +F ++L L L N I L+ +F L LE L L N I
Sbjct: 174 EKLDLASNSITDIGTDHFSSF-NTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIR 232
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD-VFSNTI 560
V F +P+LQ + L+ N++ L FY L+ LN+S NR++++ +F T
Sbjct: 233 EVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTS 292
Query: 561 IEKLDISYNQ 570
+E LD+SYNQ
Sbjct: 293 LEVLDLSYNQ 302
Score = 240 (89.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 98/377 (25%), Positives = 181/377 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I ++ + + Y LQ L +S N ++ I+ F+ F L L+I ++ +
Sbjct: 62 NEIESIDKSRLKGFYFLQTLDISNNIIRHID-----FEFFYNLPNLKI-LNIRKNRLARI 115
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L LE L + +N I + + L L ++ ++L N IS + ++ +
Sbjct: 116 PRGSHELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVN--I 173
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+++ L++N + I +D F + L T+ L+ N + ++ SF L + ++ L+ N I+
Sbjct: 174 EKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIRE 233
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ AF LP+L + L N + + +F + +LNLS N + + E
Sbjct: 234 VRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLK---HLNLSTNRVQAVTEG-WMFG 289
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ LDLS N+IQ ++ + L+ L L N I+ L + +F L LE L L
Sbjct: 290 LTSLEVLDLSYNQIQSFHISSW-SHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSA 348
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLT--GEQFYFSFK--LRILNISHNRLRSLPR 553
N+I + K +GM +L +DLS N +++ G Y + LR L ++N+LR +P+
Sbjct: 349 NSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRSLRFTNNQLRVIPK 408
Query: 554 DVFSN-TIIEKLDISYN 569
F +E+LD++ N
Sbjct: 409 RAFERFPALEELDLTDN 425
Score = 196 (74.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 91/411 (22%), Positives = 185/411 (45%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDR 134
L +++ +IE + ++ TLD+S+N + ++ Y N+ L+ L I K+R
Sbjct: 57 LLLSDNEIESIDKSRLKGFYFLQ--TLDISNNIIRHIDFEFFY-NLPNLKILN--IRKNR 111
Query: 135 EKXXXXXXXXXXRCNKITDLNGNLFRHL---QKSIVKAKKNNNNNEDQVSDREKXXXXXX 191
K+ DL NL + + S + A ++ + + + +S K
Sbjct: 112 LARIPRGSHELGHLEKL-DLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAK 170
Query: 192 XXXXRC----NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISF 247
+ N ITD+ + F L L L+ N I LN F KL+ L+++
Sbjct: 171 VNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARN--HITTLNQFSFSRLRKLESLDLTR 228
Query: 248 SLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNN 307
++ E + N+ L +L+ +++ N++ + + Y L ++NL N++ +
Sbjct: 229 NMIR--EVRFLAFNQ-LPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEG 285
Query: 308 LFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLN 367
+ F + L+ + LS N ++ ++ + +L ++L N ++S+ + SF+ L +
Sbjct: 286 -WMFGLTS-LEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEE 343
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN--VFSNITSKQTPMNLNLSNNY 425
++LS N I ++ A V + +L KLDL N L + V N TS +L +NN
Sbjct: 344 LILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYN-TSMPFLRSLRFTNNQ 402
Query: 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+ + + ++ P ++ LDL++N I + + L++L ++ + I
Sbjct: 403 LRVIPKRAFERFPA-LEELDLTDNPIATIHPEAFEPL--ELKRLVMNSSSI 450
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 92/370 (24%), Positives = 162/370 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I ++ F +L NL+ L++ N+L I S+ EKL L S S E Y
Sbjct: 86 NIIRHIDFEFFYNLPNLKILNIRKNRLARIPRGSHELGHLEKLDLRSNLISTVTSEELSY 145
Query: 258 YI------LNKNLNT------------LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
L++NL + +E L + +N+I +I + +L + L N
Sbjct: 146 LAAVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARN 205
Query: 300 KISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSF 359
I+ + N F F+ ++L+ + L+ N + + F L L ++L+ N + + F
Sbjct: 206 HITTL--NQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMF 263
Query: 360 KNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL 419
+ ++ LS N+++ + L +L LDL N+++ F+++ +S+ + L
Sbjct: 264 YACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKW---L 320
Query: 420 NLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
+L +N I +L + ++ L LS N I + F SL KL L N +
Sbjct: 321 SLHSNRIQSLPSGSFRVLR-QLEELILSANSIDSLH-KFALVGMSSLHKLDLSSNTLAVC 378
Query: 480 --DATAFGNLDVLELLSLE--HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY-F 534
D N + L SL +N + V+ KR F P L+ +DL+ N I+ + E F
Sbjct: 379 VEDGAVLYNTSMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAFEPL 438
Query: 535 SFKLRILNIS 544
K ++N S
Sbjct: 439 ELKRLVMNSS 448
>UNIPROTKB|E2RFX7 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 OMA:YFELKAN EMBL:AAEX03013284
RefSeq:XP_003639854.1 Ensembl:ENSCAFT00000008522 GeneID:100856466
KEGG:cfa:100856466 NextBio:20859498 Uniprot:E2RFX7
Length = 840
Score = 164 (62.8 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 39/131 (29%), Positives = 73/131 (55%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ NN + + LT+ ++L +N I+ I F N LK++ +++N LE+
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAISLHLGFNNIADIETGAF--NGLGLLKQLHINHNSLEI 126
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++ DTF+ L+ L + N + I+ ++F LN + ++L+ N I+ + PN F +P L
Sbjct: 127 LKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-L 185
Query: 390 VKLDLQDNKLK 400
LDL+ N+L+
Sbjct: 186 THLDLRGNQLQ 196
Score = 160 (61.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 44/168 (26%), Positives = 81/168 (48%)
Query: 409 NITSKQTPMNLNLSNNYITNLYE-NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
N K M +N I L + + P + L L NN + + N +++
Sbjct: 36 NCEEKDGTMLINCEEKGIKKLSQISVPPSRPFH---LSLLNNGLTMLHTNDFSGLTNAI- 91
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L+L FN I ++ AF L +L+ L + HN++ ++ + TF G+ NL+ + N I+++
Sbjct: 92 SLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVI 151
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
F +L++L ++ N + SLP ++F + LD+ NQ + P
Sbjct: 152 EPSAFSKLNRLKVLILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLP 199
Score = 153 (58.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 106/432 (24%), Positives = 184/432 (42%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNN-EDQVSDREKXXXXXXXXXXRCNKITDLNGNL 207
N I D+ F L ++K N+N+ E D N IT + +
Sbjct: 98 NNIADIETGAFNGL--GLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSA 155
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
F L L+ L L+ N ++ L N+F F L L++ + + PY +++ +
Sbjct: 156 FSKLNRLKVLILNDNAIE--SLPPNIFR-FVPLTHLDLRGNQLQT--LPYVGFLEHIGRI 210
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLE-YNKISKIHNN---LFHFNIHKRLKEIRLS 323
L +++N K N L L + N+ + I I N F +I RLK+ +
Sbjct: 211 LDLQLEDN--KWTCNCDLLEL-KIWLENMPPQSVIGDIVCNSPPFFKGSILSRLKKESIC 267
Query: 324 NN---YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY- 379
Y E D +L T ++S + + S K+TS +++ + +
Sbjct: 268 PTPPVYEE--HEDPSGSLHLAATSSISDSRM-STKSTSLLRPATKAPVLIPYITKPFTQL 324
Query: 380 PNAFVNLPNLVKLDLQDNKL---KDFNLNVFSNITSK-QTPMNLNLSNNYITNLYENDKK 435
P + +P K+ L ++ N+ S++ Q P L L+ N I L ++D
Sbjct: 325 PGPYCPIPCNCKVLSPSGLLVHCQERNIESLSDLKPPPQNPRKLVLAGNIIHTLMKSDLV 384
Query: 436 QAPIYIKSLDLSNNRIQEVPV-NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
+ ++ L L NNRI+ + +F+ L+KLYL+ N + L F L LE L
Sbjct: 385 EY-FTLEMLHLGNNRIEVLEEGSFINL--TRLQKLYLNGNHLTKLSRGMFLGLHNLEYLY 441
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
LE+N + ++ TF MP L+++ L+ N + +L + L +N+ N+ LP
Sbjct: 442 LEYNAVKEILPGTFNPMPKLKVLYLNNNLLQVLP-PHIFSGVSLTRINLKTNQFTHLP-- 498
Query: 555 VFSNTIIEKLDI 566
SN I++ LD+
Sbjct: 499 -VSN-ILDDLDL 508
Score = 146 (56.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + L NN +E++E +F NL L + L+ N L + F L+N+ + L +N +K
Sbjct: 389 LEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLEYNAVK 448
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
I P F +P L L L +N L+ ++FS ++ + +NL N T+L ++
Sbjct: 449 EILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVSLTR----INLKTNQFTHLPVSNILD 504
Query: 437 APIYIKSLDLSNN 449
+ +DL +N
Sbjct: 505 DLDLLTQIDLEDN 517
Score = 143 (55.4 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 39/139 (28%), Positives = 74/139 (53%)
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+D K P + L L+ N I + + L + +L L+L N I+ L+ +F NL L+
Sbjct: 356 SDLKPPPQNPRKLVLAGNIIHTLMKSDLVEYF-TLEMLHLGNNRIEVLEEGSFINLTRLQ 414
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N++ + + F+G+ NL+ + L +N + + F KL++L +++N L+ L
Sbjct: 415 KLYLNGNHLTKLSRGMFLGLHNLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLQVL 474
Query: 552 PRDVFSNTIIEKLDISYNQ 570
P +FS + ++++ NQ
Sbjct: 475 PPHIFSGVSLTRINLKTNQ 493
Score = 141 (54.7 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 46/157 (29%), Positives = 75/157 (47%)
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
P +L+L NN +T L+ ND I SL L N I ++ L++L+++ N
Sbjct: 66 PFHLSLLNNGLTMLHTNDFSGLTNAI-SLHLGFNNIADIETGAFNGLG-LLKQLHINHNS 123
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
++ L F L+ LE L ++N I V+ F + L+++ L+ N I L F F
Sbjct: 124 LEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRF- 182
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572
L L++ N+L++LP F I LD+ +K
Sbjct: 183 VPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 219
Score = 135 (52.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 40/133 (30%), Positives = 68/133 (51%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
TLE L + NN I+ + S NLT L + L N ++K+ +F +H L+ + L N
Sbjct: 388 TLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMF-LGLHN-LEYLYLEYN 445
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFV 384
++ I TF + +L + L+ NLL+ + F ++ + I L NQ ++ N
Sbjct: 446 AVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVS-LTRINLKTNQFTHLPVSNILD 504
Query: 385 NLPNLVKLDLQDN 397
+L L ++DL+DN
Sbjct: 505 DLDLLTQIDLEDN 517
Score = 109 (43.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 37/138 (26%), Positives = 66/138 (47%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
+++L N ++ +H N F + + + L N + IE+ F L L + +++N L+
Sbjct: 68 HLSLLNNGLTMLHTNDFS-GLTNAIS-LHLGFNNIADIETGAFNGLGLLKQLHINHNSLE 125
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
+K +F L N+ + N I I P+AF L L L L DN ++ N+F +
Sbjct: 126 ILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFV-- 183
Query: 413 KQTPM-NLNLSNNYITNL 429
P+ +L+L N + L
Sbjct: 184 ---PLTHLDLRGNQLQTL 198
Score = 109 (43.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 38/156 (24%), Positives = 71/156 (45%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L+ N++ ++ + + + L N+I+ + +F+NL L KL L N L +
Sbjct: 368 LVLAGNIIHTLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLS 427
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFA 463
+F + + + L L N + + P +K L L+NN +Q +P +
Sbjct: 428 RGMFLGLHNLEY---LYLEYNAVKEILPGTFNPMP-KLKVLYLNNNLLQVLPPHIFSGV- 482
Query: 464 DSLRKLYLDFNEIKHLDAT-AFGNLDVLELLSLEHN 498
SL ++ L N+ HL + +LD+L + LE N
Sbjct: 483 -SLTRINLKTNQFTHLPVSNILDDLDLLTQIDLEDN 517
Score = 98 (39.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 38/134 (28%), Positives = 56/134 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N +T L+ N F L N L L FN + IE + N + ++L + S + + F
Sbjct: 74 NGLTMLHTNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTF- 132
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L LE+L DNN I I + L L + L N I + N+F F
Sbjct: 133 -----HGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRF---VP 184
Query: 317 LKEIRLSNNYLELI 330
L + L N L+ +
Sbjct: 185 LTHLDLRGNQLQTL 198
Score = 65 (27.9 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 9 KLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNID 68
KLS +++ L + G T+L + G+ N+ L + ++ I+ AF+ +
Sbjct: 55 KLSQISVPPSRPFHLSLLNNGLTMLHTNDFSGLTNAI--SLHLGFNNIADIETGAFNGLG 112
Query: 69 ACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT 128
L I + +E L F +EN+E + D +N ++V+ + +KL L
Sbjct: 113 LLKQL--HINHNSLEILKEDTFHGLENLEFLQAD--NNFITVIEPSAF----SKLNRLKV 164
Query: 129 TILKD 133
IL D
Sbjct: 165 LILND 169
Score = 54 (24.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 3 LDLSHNKLSVLNMATLYS--NVTKLQHLGT--TILKGDQLQGIFNSKLRELEITGKDLKF 58
L ++HN L +L T + N+ LQ T+++ + ++L+ L + ++
Sbjct: 117 LHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKL--NRLKVLILNDNAIES 174
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPS-GLFDKIENIEQMTLDLSHNK 107
+ P+ F + + L + Q++ LP G + I I + L L NK
Sbjct: 175 LPPNIFRFVPLTH---LDLRGNQLQTLPYVGFLEHIGRI--LDLQLEDNK 219
>RGD|1588563 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] REFSEQ:NM_001106947 Ncbi:NP_001100417
Length = 836
Score = 172 (65.6 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 62/211 (29%), Positives = 105/211 (49%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
K++ ++ N ++ ++ F + L+ + L N + +IK F NL N+ + L+ NQI+
Sbjct: 380 KKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITAIKGEVFHNLTNLRRLYLNGNQIER 439
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+YP F L NL L L+ N +K+ F ++ + Q L L+NN + +L A
Sbjct: 440 LYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSLPNLQL---LYLNNNLLKSLPVYIFSGA 496
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ L+L NN+ +PV+ + SL ++ L+ N D T +L L+L LE
Sbjct: 497 PL--ARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNP---WDCTC--DLVALKLW-LEK 548
Query: 498 NNIAVVVKR----TFIGMPNLQIIDLSFNEI 524
N +VVK T + N+++ L NEI
Sbjct: 549 LNDGIVVKELKCETPVQFANIELKSLK-NEI 578
Score = 156 (60.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 413 KQTPMNLNLSNN-YITNLYE-NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
K P +L LS N N+ ++ P+ K L ++ N I++V ++ F + L L+
Sbjct: 349 KTHPSDLGLSVNCQEKNIQSMSELTPKPLNAKKLHVNGNNIKDVDISDFTEF-EGLDLLH 407
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
L N+I + F NL L L L N I + F G+ NLQ + L +N I +
Sbjct: 408 LGSNQITAIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAG 467
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
F L++L +++N L+SLP +FS + +L++ N+
Sbjct: 468 TFDSLPNLQLLYLNNNLLKSLPVYIFSGAPLARLNLRNNK 507
Score = 151 (58.2 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 36/127 (28%), Positives = 69/127 (54%)
Query: 275 NNIKNIRNYSLY-NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
NN NI + + N + ++L NK+ I F + LK++ L+NN L+++ +D
Sbjct: 68 NNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAF-LGL-SALKQLHLNNNELKILRAD 125
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
TF ++ L + YNL+K I+ +F L+ + ++L+ N I ++ N F +L LD
Sbjct: 126 TFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF-RFASLTHLD 184
Query: 394 LQDNKLK 400
++ N+++
Sbjct: 185 IRGNRIQ 191
Score = 149 (57.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 45/148 (30%), Positives = 71/148 (47%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
KNI++ S LN L N + ++ F + L + L +N + I+ + F+N
Sbjct: 364 KNIQSMSELTPKPLNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITAIKGEVFHN 423
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L L + L+ N ++ + F L+N+ + L +N IK I F +LPNL L L +N
Sbjct: 424 LTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSLPNLQLLYLNNN 483
Query: 398 KLKDFNLNVFSNITSKQTPM-NLNLSNN 424
LK + +FS P+ LNL NN
Sbjct: 484 LLKSLPVYIFSG-----APLARLNLRNN 506
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 401 DFNLNV-FSNITSKQTPMNLNLSNNYITNLYENDKKQAP-IYIKSLDLSNNRIQEVPVNF 458
D +++V N+ S + N+ N ++Y ++ + P L+ NN + + N
Sbjct: 19 DSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFYHLNFQNNFLNILYPNT 78
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
F+ ++ L+L N++++++ AF L L+ L L +N + ++ TF+G+ NL+ +
Sbjct: 79 FVNFSHAV-SLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQ 137
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+N I + F KL++L ++ N + LP ++F + LDI N+
Sbjct: 138 ADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGNR 189
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/172 (25%), Positives = 83/172 (48%)
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343
S ++ ++ Y+N E K+S N + NN+L ++ +TF N +
Sbjct: 31 SCVSVENVLYVNCE--KVSVYRPNQLK-PPWSNFYHLNFQNNFLNILYPNTFVNFSHAVS 87
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N L++I+ +F L+ + + L+ N++K + + F+ + NL L N +K
Sbjct: 88 LHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIE 147
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
F+ + + L L++N I+ L +N + A + LD+ NRIQ++P
Sbjct: 148 RGAFNKLHKLKV---LILNDNLISFLPDNIFRFASL--THLDIRGNRIQKLP 194
Score = 131 (51.2 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 47/175 (26%), Positives = 76/175 (43%)
Query: 240 LQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN------- 292
L L I +L +S I + N ++++N N S+Y L
Sbjct: 3 LWLFLIVSALISSTNADSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFY 62
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++N + N ++ ++ N F N + + L NN L+ IE F L L + L+ N LK
Sbjct: 63 HLNFQNNFLNILYPNTF-VNFSHAVS-LHLGNNKLQNIEGGAFLGLSALKQLHLNNNELK 120
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F + N+ + +N IKYI AF L L L L DN + N+F
Sbjct: 121 ILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF 175
Score = 103 (41.3 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 36/130 (27%), Positives = 71/130 (54%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ ++ G F L L++L L+ N+L+I L ++ F E L+ L+ ++L E
Sbjct: 93 NKLQNIEGGAFLGLSALKQLHLNNNELKI--LRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH--NNLFHFNIHK 315
+ NK L+ L+ L +++N I + + +++ SL ++++ N+I K+ L H
Sbjct: 151 F--NK-LHKLKVLILNDNLISFLPD-NIFRFASLTHLDIRGNRIQKLPYIGVLEHIG--- 203
Query: 316 RLKEIRLSNN 325
R+ E++L +N
Sbjct: 204 RVVELQLEDN 213
Score = 103 (41.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 40/138 (28%), Positives = 66/138 (47%)
Query: 167 VKAKK---NNNNNED-QVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFN 222
+ AKK N NN +D +SD + N+IT + G +F +L NL+ L L+ N
Sbjct: 377 LNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGS-NQITAIKGEVFHNLTNLRRLYLNGN 435
Query: 223 KLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRN 282
QI L +F LQ L + ++L + +L L+ L ++NN +K++
Sbjct: 436 --QIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTF---DSLPNLQLLYLNNNLLKSLPV 490
Query: 283 YSLYNLTSLNYINLEYNK 300
Y +++ L +NL NK
Sbjct: 491 Y-IFSGAPLARLNLRNNK 507
Score = 80 (33.2 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 35/116 (30%), Positives = 49/116 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L N F + + L L NKLQ IE F L+ L + N+NE
Sbjct: 69 NFLNILYPNTFVNFSHAVSLHLGNNKLQNIE--GGAFLGLSALKQLHL-----NNNELKI 121
Query: 258 YILNK--NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+ + LE+L D N IK I + L L + L N IS + +N+F F
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRF 177
Score = 73 (30.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 37/161 (22%), Positives = 73/161 (45%)
Query: 10 LSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDA 69
+SV N+ LY N K+ ++ + +QL+ + S L L + P+ F N
Sbjct: 33 VSVENV--LYVNCEKV-----SVYRPNQLKPPW-SNFYHLNFQNNFLNILYPNTFVNFS- 83
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT- 128
+ ++L + N +++ + G F + ++Q L L++N+L +L T + + L++L
Sbjct: 84 -HAVSLHLGNNKLQNIEGGAFLGLSALKQ--LHLNNNELKILRADT-FLGIENLEYLQAD 139
Query: 129 -TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
++K E+ K+ LN NL L +I +
Sbjct: 140 YNLIKYIERGAFNKLHKL----KVLILNDNLISFLPDNIFR 176
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 171 (65.3 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 52/169 (30%), Positives = 86/169 (50%)
Query: 259 ILNKNL--NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
I+ +N+ NT E L ++ NNI I L L + L NKIS I FH ++ K
Sbjct: 48 IVPRNIPRNT-ERLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFH-DL-KE 104
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ +RL+ N L+L F +L + LS N +++I +F+ ++ N+ L +NQI
Sbjct: 105 LERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQIS 164
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
I AF L +L L L +N + ++ F+++ +T L+ +N Y
Sbjct: 165 CIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT-FRLHSNNLY 212
Score = 162 (62.1 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 51/162 (31%), Positives = 85/162 (52%)
Query: 274 NNNIKNIRNYSLYNL-TSL----NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + T+L I LE N I I F + +K+L+ + LSNN +
Sbjct: 284 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAF--SPYKKLRRLDLSNNQIS 341
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ D F L+ LN++ L N + + + F+ L ++ ++L+ N+I + +AF +L N
Sbjct: 342 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 401
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
L L L DNKL+ FS + + QT M+L N +I + +
Sbjct: 402 LNLLSLYDNKLQTVAKGTFSALRAIQT-MHL-AQNPFICDCH 441
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 360 KNL-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
+N+ N + L+ N I I F L +L L L +NK+ F ++ + +
Sbjct: 51 RNIPRNTERLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELER-LR 109
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
LN +N L+ + LDLS N+IQ +P + D ++ L LD+N+I
Sbjct: 110 LNRNN---LQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVD-IKNLQLDYNQISC 165
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ AF L LE+L+L +NNI + +F MP L+ L N +
Sbjct: 166 IEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 133 (51.9 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 50/185 (27%), Positives = 80/185 (43%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L ++NN + ++ L L INL NKI+ I F + EI L++N LE
Sbjct: 534 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGA--SGVNEILLTSNRLE 591
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
++ F L+ L T+ L N + + SF L ++ + L NQI + P AF L +
Sbjct: 592 NVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHS 651
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L L+L N FN N + +T N + Q P ++K + + +
Sbjct: 652 LSTLNLLANP---FNCNCHLAWLGEWLRRK-----RIVTG---NPRCQKPYFLKEIPIQD 700
Query: 449 NRIQE 453
IQ+
Sbjct: 701 VAIQD 705
Score = 130 (50.8 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 297 EYNKISKIHNNLFHF----NIHKRLKEIR---LSNNYLELIESDTFYNLKELNTITLSYN 349
+Y +++NN F I K+L ++R LSNN + IE F +N I L+ N
Sbjct: 529 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSN 588
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L++++ FK L ++ ++L N+I + ++F L ++ L L DN++ F
Sbjct: 589 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGT 648
Query: 410 ITSKQTPMNLNLSNNYITNLY 430
+ S T +NL L+N + N +
Sbjct: 649 LHSLST-LNL-LANPFNCNCH 667
Score = 129 (50.5 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P I + L N I+ +P + LR+L L N+I L AF L L L L
Sbjct: 303 PETITEIRLEQNSIRVIPPGAFSPYK-KLRRLDLSNNQISELAPDAFQGLRSLNSLVLYG 361
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + K F G+ +LQ++ L+ N+I+ L + F L +L++ N+L+++ + FS
Sbjct: 362 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFS 421
Query: 558 NT-IIEKLDISYN 569
I+ + ++ N
Sbjct: 422 ALRAIQTMHLAQN 434
Score = 124 (48.7 bits), Expect = 0.00038, P = 0.00038
Identities = 30/104 (28%), Positives = 54/104 (51%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+L L+ N I + T F L L +L L N I+ + + F + L+ + L+ N + +
Sbjct: 59 RLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLF 118
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
F + KL L++S N+++++PR F + I+ L + YNQ
Sbjct: 119 PELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQ 162
Score = 117 (46.2 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 414 QTPMNLNLSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
Q L L+NN T L K+ P ++ ++LSNN+I ++ + A + ++ L
Sbjct: 529 QYTAELRLNNNEFTVLEATGIFKKLP-QLRKINLSNNKITDIEEGAFEG-ASGVNEILLT 586
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++++ F L+ L+ L L N I+ V +F G+ +++++ L N+I+ + F
Sbjct: 587 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAF 646
Query: 533 YFSFKLRILNISHN 546
L LN+ N
Sbjct: 647 GTLHSLSTLNLLAN 660
Score = 107 (42.7 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 37/148 (25%), Positives = 71/148 (47%)
Query: 226 IIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSL 285
+ E+ +N+ + +++L + S + F Y K L L+ + NN I + +
Sbjct: 295 LTEIPTNLPETITEIRLEQNSIRVIPPGAFSPY---KKLRRLD---LSNNQISELAPDAF 348
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
L SLN + L NKI+++ +LF +L + L+ N + + D F +L LN ++
Sbjct: 349 QGLRSLNSLVLYGNKITELPKSLFEGLFSLQL--LLLNANKINCLRVDAFQDLHNLNLLS 406
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L N L+++ +F L + + L+ N
Sbjct: 407 LYDNKLQTVAKGTFSALRAIQTMHLAQN 434
Score = 104 (41.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 41/154 (26%), Positives = 71/154 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT + F L +L+ L L NK+ IE + F ++L+ L ++ + N FP
Sbjct: 65 NNITRITKTDFAGLRHLRILQLMENKISTIERGA--FHDLKELERLRLNRN--NLQLFPE 120
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+L L L + N I+ I + + + L+YN+IS I + F + L
Sbjct: 121 -LLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFR--ALRDL 177
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+ + L+NN + + +F ++ +L T L N L
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 102 (41.0 bits), Expect = 9.8e-17, Sum P(3) = 9.8e-17
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y L L+NN + + LRK+ L N+I ++ AF G V E+L L
Sbjct: 528 PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEIL-LT 586
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + V + F G+ +L+ + L N IS + + F +R+L++ N++ ++ F
Sbjct: 587 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAF 646
Score = 100 (40.3 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIA 501
++D SN ++ ++P + Q A+ L L+ NE L+AT F L L ++L +N I
Sbjct: 512 TVDCSNQKLNKIPDHIPQYTAE----LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKIT 567
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-I 560
+ + F G + I L+ N + + + F L+ L + NR+ + D F+
Sbjct: 568 DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGS 627
Query: 561 IEKLDISYNQ-DKIRPG 576
+ L + NQ + PG
Sbjct: 628 VRLLSLYDNQITTVAPG 644
Score = 80 (33.2 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 40 GIFN--SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F+ KLR L+++ + + P AF + + L L +I ELP LF+ + +++
Sbjct: 322 GAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY--GNKITELPKSLFEGLFSLQ 379
Query: 98 QMTLDLSH-NKLSV--------LNMATLYSNVTKLQ 124
+ L+ + N L V LN+ +LY N KLQ
Sbjct: 380 LLLLNANKINCLRVDAFQDLHNLNLLSLYDN--KLQ 413
Score = 74 (31.1 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
K + + +NN + D + NKIT+L +LF L++LQ L L+ NK
Sbjct: 328 KKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 387
Query: 224 LQIIELNSNVFDVFEKLQLLEI 245
+ + +++ F L LL +
Sbjct: 388 INCLRVDA--FQDLHNLNLLSL 407
Score = 70 (29.7 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 27/125 (21%), Positives = 62/125 (49%)
Query: 3 LDLSHNKLSVLNMATLYS--NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
L L NK+S + + + +L+ + +L + +KL L+++ ++ I
Sbjct: 84 LQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIP 143
Query: 61 PSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
AF D+ L++ QI + G F + ++E +TL+ +N ++ L++A+ +++
Sbjct: 144 RKAFRG---AVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN--NNNITRLSVAS-FNH 197
Query: 120 VTKLQ 124
+ KL+
Sbjct: 198 MPKLR 202
Score = 48 (22.0 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 38/182 (20%), Positives = 76/182 (41%)
Query: 2 TLDLSHNK-LSVLNMATLYSNVTKLQHLGTTI-LKGDQLQGIFNSKLRE---LEITGKDL 56
TL LS LS+LN ++ + G+T+ G L+ + + R L++ G ++
Sbjct: 8 TLSLSLALVLSILNKVAPHACPAQCSCSGSTVDCHGLALRIVPRNIPRNTERLDLNGNNI 67
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH----NKLSVLN 112
I + F + + L++ +I + G F ++ +E++ L+ ++ +L L
Sbjct: 68 TRITKTDFAGLR--HLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLG 125
Query: 113 MATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKN 172
A LY + ++ I + + N+I+ + FR L+ V N
Sbjct: 126 TAKLY-RLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNN 184
Query: 173 NN 174
NN
Sbjct: 185 NN 186
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 229 (85.7 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 90/309 (29%), Positives = 143/309 (46%)
Query: 254 EFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFN 312
+FP ++ L+T E L ++NN++ + L+ LT L INL NKI++I + F
Sbjct: 530 KFPEHL---PLSTTE-LRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGA 585
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ E+ L+ N L + F + L + L N ++ + +SF L N+ + L
Sbjct: 586 --SSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYD 643
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVFSN-ITSKQTPM-NLNLSNN-YITN 428
NQ+ I P AF +LPNL L+L N D L+ + S+Q N N ++
Sbjct: 644 NQLSTIMPGAFDSLPNLSTLNLLANPFSCDCRLSWLGEWLRSRQIVTGNPRCQNPAFLRE 703
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG-NL 487
+ D + P +I D+ + +P + + N KHL A G L
Sbjct: 704 IPLQDVAK-PDFICDKDVLEQDVSCIPKPQCPEQCTCVDSVVRCSN--KHLSALPRGVPL 760
Query: 488 DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR 547
+V EL L+ N+ V + + LQ++DLS N+IS LT F +L L +S+N
Sbjct: 761 NVTELY-LD-GNVFVSIPQELSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNA 818
Query: 548 LRSLPRDVF 556
LR +P VF
Sbjct: 819 LRCIPPLVF 827
Score = 184 (69.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 88/378 (23%), Positives = 162/378 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T + + F L +L+ L L N QI+ ++ F ++L L ++ + + P
Sbjct: 68 NNLTHIGKDDFAGLKHLRILHLMDN--QIVSIDRGAFSDLKELDRLRLNRNRLQ--QLPE 123
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ KN L L + NNI+ I + T + + L+ N IS I + F + L
Sbjct: 124 LLFLKN-PALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFR--AMRVL 180
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKN--LNNMLNIVLSFNQI 375
+ + L+NN + I +F ++ +L T L +N L+ S+ + L + L + Q
Sbjct: 181 EVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCQLSWLSQWLRQRPALGL-YTQC 239
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN--- 432
+NL L K D D + + S P + +NN + +
Sbjct: 240 SSPAHLHGLNLAELQKKDFTCAGALDSSPQP-CGLASGSCPPMCSCTNNIVDCRGKGLTA 298
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
P + + L N I+ VP ++ LR++ L N+I + AF L L
Sbjct: 299 IPANMPESMTEIRLEQNGIKSVPPGAFSSYK-RLRRIDLSNNQISEIAPDAFHGLRSLNS 357
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L L N I + + F G+ L+++ L+ N+I + F L +L++ N++++L
Sbjct: 358 LVLYGNKITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLA 417
Query: 553 RDVFSNT-IIEKLDISYN 569
+ F+ I+ L ++ N
Sbjct: 418 KGTFAPLKSIQTLHLAQN 435
Score = 164 (62.8 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/155 (31%), Positives = 80/155 (51%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L+ N + +I + F L +L L L DN++ + FS++ K+ L L+ N + L
Sbjct: 65 LNANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFSDL--KELD-RLRLNRNRLQQL 121
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
E + P + LDLS N IQ +P + D ++ L LD N I ++ AF + V
Sbjct: 122 PELLFLKNPA-LSRLDLSENNIQMIPRRAFRGATD-IKNLQLDKNHISCIEDGAFRAMRV 179
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
LE+L+L +NNI+ + +F MP L+ L +N +
Sbjct: 180 LEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSL 214
Score = 156 (60.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 133/571 (23%), Positives = 237/571 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFN--SKLRELEITGKDL 56
+DLS+N++S + + L+ L + +L G+++ +G+F+ S L L + +
Sbjct: 334 IDLSNNQISEIAPDAFHG----LRSLNSLVLYGNKITDLPRGVFDGLSALELLLLNANKI 389
Query: 57 KFIDPSAFDNIDACYDLTL-KITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMAT 115
+ + F +++ +L+L + + +I+ L G F +++I+ TL L+ N V +
Sbjct: 390 HCVRVNVFQDLE---NLSLLSLYDNKIQTLAKGTFAPLKSIQ--TLHLAQNPF-VCDCG- 442
Query: 116 LYSNVTKLQHLGTTILKDREKXXXXXXXXXXR-CNK-ITDLNGNLFRHLQKSIVKAKKNN 173
L+ L + + + R NK I+ + FR S K +
Sbjct: 443 -------LKWLADFLRSNPIETSGARCSSPRRLANKRISQIKSKKFRC---SAAKEQYYI 492
Query: 174 NNNEDQVSDREKXXXXXXXXXXRCNK-ITDLNGNL----F-RHL-YNLQELSLSFNKLQI 226
+ED +++ RC + D + NL F HL + EL L+ N L I
Sbjct: 493 PGSEDTRMNKDCNSKPVCPPKCRCEATVVDCS-NLRLTKFPEHLPLSTTELRLNNNDLSI 551
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
+E + +F L+ + +S + E + + +++ L + N + ++R
Sbjct: 552 LEA-TGLFRPLTHLKKINLSNNKITEIEDGAF---EGASSVVELHLTANLLVSVRGGMFR 607
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL 346
+ L + L N I +HN+ F + RL + L +N L I F +L L+T+ L
Sbjct: 608 GMDGLRMLMLRNNHIRCVHNSSFSGLQNVRL--LSLYDNQLSTIMPGAFDSLPNLSTLNL 665
Query: 347 SYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF--NL 404
N S+ L L QI P N L ++ LQD DF +
Sbjct: 666 LANPFSCDCRLSW------LGEWLRSRQIVTGNPRC-QNPAFLREIPLQDVAKPDFICDK 718
Query: 405 NVF----SNITSKQTPMNLNLSNNYI--TNLYEND-KKQAPIYIKSLDLSNNRIQEVPVN 457
+V S I Q P ++ + +N + + + P+ + L L N +P
Sbjct: 719 DVLEQDVSCIPKPQCPEQCTCVDSVVRCSNKHLSALPRGVPLNVTELYLDGNVFVSIPQE 778
Query: 458 FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
L F L+ L L N+I L T+F N+ L L L +N + + F G+ +L+++
Sbjct: 779 -LSAFRQ-LQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGGLSSLRLL 836
Query: 518 DLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L N IS L + F + L L I N L
Sbjct: 837 SLHGNNISELHQQIFRDAASLSHLAIGANPL 867
Score = 150 (57.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI K + + L+ N L I D F LK L + L N + SI +F +L + + L+
Sbjct: 55 NIPKTTERLDLNANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLN 114
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+++ + F+ P L +LDL +N ++ F T + NL L N+I+ + E
Sbjct: 115 RNRLQQLPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIK---NLQLDKNHISCI-E 170
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
+ +A ++ L L+NN I +P++ LR L +N ++
Sbjct: 171 DGAFRAMRVLEVLTLNNNNISAIPISSFNHMP-KLRTFRLHWNSLR 215
Score = 121 (47.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 262 KNL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEI 320
+N+ T E L ++ NN+ +I L L ++L N+I I F ++ K L +
Sbjct: 54 RNIPKTTERLDLNANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFS-DL-KELDRL 111
Query: 321 RLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
RL+ N L+ + F L+ + LS N ++ I +F+ ++ N+ L N I I
Sbjct: 112 RLNRNRLQQLPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIED 171
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT 415
AF + L L L +N + ++ F+++ +T
Sbjct: 172 GAFRAMRVLEVLTLNNNNISAIPISSFNHMPKLRT 206
Score = 110 (43.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 81/365 (22%), Positives = 153/365 (41%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
++ E+ L N ++ + F +++L+ +++S + S P L +L L +
Sbjct: 306 SMTEIRLEQNGIKSVP--PGAFSSYKRLRRIDLSNNQI-SEIAPDAF--HGLRSLNSLVL 360
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
N I ++ L++L + L NKI + N+F ++ + L + L +N ++ +
Sbjct: 361 YGNKITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQ-DL-ENLSLLSLYDNKIQTLAK 418
Query: 333 DTFYNLKELNTITLSYN-------------LLKS--IKTTSFK--NLNNMLNIVLSFNQI 375
TF LK + T+ L+ N L+S I+T+ + + + N +S QI
Sbjct: 419 GTFAPLKSIQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGARCSSPRRLANKRIS--QI 476
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKL-KDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
K +D ++ KD N + ++ SN +T E+
Sbjct: 477 KSKKFRCSAAKEQYYIPGSEDTRMNKDCNSKPVCPPKCRCEATVVDCSNLRLTKFPEH-- 534
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELL 493
P+ L L+NN + + L L+K+ L N+I ++ AF G V+EL
Sbjct: 535 --LPLSTTELRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVEL- 591
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + V F GM L+++ L N I + F +R+L++ N+L ++
Sbjct: 592 HLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQLSTIMP 651
Query: 554 DVFSN 558
F +
Sbjct: 652 GAFDS 656
Score = 89 (36.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 465 SLRKLYLDFNEIKHL--DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
++ +LYLD N + + +AF L +LL L +N I+ + +F M L + LS+N
Sbjct: 761 NVTELYLDGNVFVSIPQELSAFRQL---QLLDLSNNKISSLTNTSFTNMSQLTTLILSYN 817
Query: 523 EISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ + F LR+L++ N + L + +F + + L I N
Sbjct: 818 ALRCIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAIGAN 865
Score = 80 (33.2 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 40 GIFNS--KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F+S +LR ++++ + I P AF + + L L +I +LP G+FD + +E
Sbjct: 323 GAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLY--GNKITDLPRGVFDGLSALE 380
Query: 98 QMTLDLS--H-------NKLSVLNMATLYSNVTKLQHL 126
+ L+ + H L L++ +LY N K+Q L
Sbjct: 381 LLLLNANKIHCVRVNVFQDLENLSLLSLYDN--KIQTL 416
Score = 73 (30.8 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 21 NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNT 80
N L H+G D G+ LR L + + ID AF ++ D L++
Sbjct: 66 NANNLTHIGK-----DDFAGL--KHLRILHLMDNQIVSIDRGAFSDLKEL-D-RLRLNRN 116
Query: 81 QIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
++++LP LF ++N LDLS N + ++ + T +++L
Sbjct: 117 RLQQLPELLF--LKNPALSRLDLSENNIQMIPRRA-FRGATDIKNL 159
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 254 (94.5 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 96/358 (26%), Positives = 164/358 (45%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
L S N+L N N+ E L E+ + E PY+ + + + L++ +N
Sbjct: 80 LDFSHNRLS----NWNIS--LESQTLQEVKMNYNELTEIPYF--GEPTSNITLLSLVHNI 131
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
I I +L +L ++L N IS+I + F +LK + LSNN + +E+ F
Sbjct: 132 IPEINAQALQFYPALESLDLSSNIISEIKTSSFP---RMQLKYLNLSNNRITTLEAGCFD 188
Query: 337 NLKE-LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
NL L + L+ N + I FK L ++ + L N+IK + F L +L L +Q
Sbjct: 189 NLSSSLLVVKLNRNRMSMIPPKIFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQ 247
Query: 396 DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
N + F + + + L L +N +T + + + ++ L +S N I+ +
Sbjct: 248 RNGISKLKDGAFFGLNNME---ELELEHNNLTRVNKGWLYGLRM-LQQLYVSQNAIERIS 303
Query: 456 VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
+ + F L +L L +N++ LD +AF L +LE L+L N + + F + NLQ
Sbjct: 304 PDAWE-FCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQ 362
Query: 516 IIDLSFNEISML---TGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYN 569
+DL NEIS E F L L + N+++S+ + F +E LD++ N
Sbjct: 363 TLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNN 420
Score = 253 (94.1 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 89/364 (24%), Positives = 163/364 (44%)
Query: 204 NGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKN 263
N N+ LQE+ +++N+L I L L+ N+ +Y
Sbjct: 89 NWNISLESQTLQEVKMNYNELTEIPYFGEPTSNITLLSLVHNIIPEINAQALQFY----- 143
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
LE L + +N I I+ S + L Y+NL N+I+ + F N+ L ++L+
Sbjct: 144 -PALESLDLSSNIISEIKTSSFPRM-QLKYLNLSNNRITTLEAGCFD-NLSSSLLVVKLN 200
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N + +I F L L + L N +K ++ +F+ L+++ ++ + N I + AF
Sbjct: 201 RNRMSMIPPKIF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAF 259
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
L N+ +L+L+ N L N + Q L +S N I + D + +
Sbjct: 260 FGLNNMEELELEHNNLTRVNKGWLYGLRMLQ---QLYVSQNAIERI-SPDAWEFCQRLSE 315
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
LDLS N++ + + + L +L L N + H+ F L L+ L L +N I+
Sbjct: 316 LDLSYNQLTRLDESAFVGLS-LLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWA 374
Query: 504 VK---RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI 560
++ F G+ +L + L N+I +T + F L L++++N + S+ + FS T
Sbjct: 375 IEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTH 434
Query: 561 IEKL 564
+++L
Sbjct: 435 LKEL 438
Score = 239 (89.2 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 92/340 (27%), Positives = 160/340 (47%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFN---SNEFPYYILNKNLNTLEW 269
N+ LSL N + E+N+ + L+ L++S ++ + ++ FP L++
Sbjct: 121 NITLLSLVHNIIP--EINAQALQFYPALESLDLSSNIISEIKTSSFPRM-------QLKY 171
Query: 270 LAMDNNNIKNIRNYSLYNLTS-LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L + NN I + NL+S L + L N++S I +F H L+ + L N ++
Sbjct: 172 LNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLP-H--LQFLELKRNRIK 228
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
++E TF L L ++ + N + +K +F LNNM + L N + + L
Sbjct: 229 IVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRM 288
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L +L + N ++ + + + Q L+LS N +T L E+ + ++ L+L +
Sbjct: 289 LQQLYVSQNAIERISPDAWEFC---QRLSELDLSYNQLTRLDESAFVGLSL-LERLNLGD 344
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHL--DAT-AFGNLDVLELLSLEHNNIAVVVK 505
NR+ + + F +L+ L L NEI DA+ AF L L L L+ N I + K
Sbjct: 345 NRVTHIADGVFR-FLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITK 403
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFS-FKLRILNIS 544
+ FIG+ +L+ +DL+ N I + F + K ILN S
Sbjct: 404 KAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELILNTS 443
Score = 228 (85.3 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 78/271 (28%), Positives = 137/271 (50%)
Query: 305 HNNLFHFNIH---KRLKEIRLSNNYLELIESDTFYN-LKELNTITLSYNLLKSIKTTSFK 360
HN L ++NI + L+E+++ NY EL E F + ++L +N++ I + +
Sbjct: 84 HNRLSNWNISLESQTLQEVKM--NYNELTEIPYFGEPTSNITLLSLVHNIIPEINAQALQ 141
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
+ ++ LS N I I ++F + L L+L +N++ F N++S + LN
Sbjct: 142 FYPALESLDLSSNIISEIKTSSFPRM-QLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLN 200
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
N ++ + K P +++ L+L NRI+ V Q DSLR L + N I L
Sbjct: 201 --RNRMSMIPPKIFK-LP-HLQFLELKRNRIKIVEGLTFQGL-DSLRSLKMQRNGISKLK 255
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
AF L+ +E L LEHNN+ V K G+ LQ + +S N I ++ + + F +L
Sbjct: 256 DGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSE 315
Query: 541 LNISHNRLRSLPRDVFSN-TIIEKLDISYNQ 570
L++S+N+L L F +++E+L++ N+
Sbjct: 316 LDLSYNQLTRLDESAFVGLSLLERLNLGDNR 346
Score = 226 (84.6 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 81/300 (27%), Positives = 146/300 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I+++ + F + L+ L+LS N++ +E + FD LL + + + P
Sbjct: 154 NIISEIKTSSFPRM-QLKYLNLSNNRITTLE--AGCFDNLSS-SLLVVKLNRNRMSMIPP 209
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
I L L++L + N IK + + L SL + ++ N ISK+ + F F ++ +
Sbjct: 210 KIFK--LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAF-FGLNN-M 265
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+E+ L +N L + Y L+ L + +S N ++ I +++ + + LS+NQ+
Sbjct: 266 EELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTR 325
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ +AFV L L +L+L DN++ VF +++ QT L+L NN I+ E D +A
Sbjct: 326 LDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQT---LDLRNNEISWAIE-DASEA 381
Query: 438 PIYIKSLD---LSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELL 493
+ SL L N+I+ + F+ +SL L L+ N I + AF + EL+
Sbjct: 382 FAGLTSLTKLILQGNQIKSITKKAFIGL--ESLEHLDLNNNAIMSIQENAFSQTHLKELI 439
Score = 190 (71.9 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 84/353 (23%), Positives = 149/353 (42%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL--YSNVTKLQHLGTTILK 132
+K+ ++ E+P + NI L L HN + +N L Y + L L + I+
Sbjct: 102 VKMNYNELTEIPY-FGEPTSNIT--LLSLVHNIIPEINAQALQFYPALESLD-LSSNIIS 157
Query: 133 DREKXXX---XXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXX 189
+ + N+IT L F +L S++ K N N + +
Sbjct: 158 EIKTSSFPRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMS-MIPPKIFKLPH 216
Query: 190 XXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS- 248
+ N+I + G F+ L +L+ L + N + +L F ++ LE+ +
Sbjct: 217 LQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGIS--KLKDGAFFGLNNMEELELEHNN 274
Query: 249 LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNL 308
L N+ Y L L+ L + N I+ I + L+ ++L YN+++++ +
Sbjct: 275 LTRVNKGWLY----GLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESA 330
Query: 309 FHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK-SIKTTS--FKNLNNM 365
F + L+ + L +N + I F L L T+ L N + +I+ S F L ++
Sbjct: 331 F-VGL-SLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSL 388
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
++L NQIK I AF+ L +L LDL +N + N FS K+ +N
Sbjct: 389 TKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELILN 441
Score = 134 (52.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 80/380 (21%), Positives = 163/380 (42%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
LD SHN+LS N++ L S + + L G S + L + + I+
Sbjct: 80 LDFSHNRLSNWNIS-LESQTLQEVKMNYNELTEIPYFGEPTSNITLLSLVHNIIPEINAQ 138
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMA---TLYSN 119
A A L L +N I E+ + F +++ L+LS+N+++ L L S+
Sbjct: 139 ALQFYPALESLDLS-SNI-ISEIKTSSFPRMQ---LKYLNLSNNRITTLEAGCFDNLSSS 193
Query: 120 --VTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNE 177
V KL +++ + + N+I + G F+ L +++ K N
Sbjct: 194 LLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDS--LRSLKMQRNGI 251
Query: 178 DQVSDREKXXXXXXXXXX-RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDV 236
++ D N +T +N L LQ+L +S N ++ ++ + ++
Sbjct: 252 SKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIE--RISPDAWEF 309
Query: 237 FEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL 296
++L L++S++ + ++ L+ LE L + +N + +I + L++L ++L
Sbjct: 310 CQRLSELDLSYNQLTRLDESAFV---GLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDL 366
Query: 297 EYNKIS-KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
N+IS I + F L ++ L N ++ I F L+ L + L+ N + SI+
Sbjct: 367 RNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQ 426
Query: 356 TTSFKNLNNMLNIVLSFNQI 375
+F ++ ++L+ + +
Sbjct: 427 ENAFSQ-THLKELILNTSSL 445
Score = 124 (48.7 bits), Expect = 0.00057, P = 0.00057
Identities = 38/131 (29%), Positives = 70/131 (53%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGN-LDVLELLSLEHNNIAV 502
LD S+NR+ ++ L++ +L+++ +++NE+ + FG + LLSL HN I
Sbjct: 80 LDFSHNRLSNWNIS-LES--QTLQEVKMNYNELTEIPY--FGEPTSNITLLSLVHNIIPE 134
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
+ + P L+ +DLS N IS + F +L+ LN+S+NR+ +L F N
Sbjct: 135 INAQALQFYPALESLDLSSNIISEIKTSSFP-RMQLKYLNLSNNRITTLEAGCFDNLSSS 193
Query: 563 KLDISYNQDKI 573
L + N++++
Sbjct: 194 LLVVKLNRNRM 204
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 163 (62.4 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 43/135 (31%), Positives = 72/135 (53%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ I LE N I I F + +++L+ I LSNN + I D F L+ LN++ L N
Sbjct: 174 TMTEIRLELNGIKSIPPGAF--SPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGN 231
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
+ + F L + ++L+ N+I + P+AF +L NL L L DNK++ F++
Sbjct: 232 KITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTS 291
Query: 410 ITSKQTPMNLNLSNN 424
+ + QT L+L+ N
Sbjct: 292 LRAIQT---LHLAQN 303
Score = 150 (57.9 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 90/343 (26%), Positives = 147/343 (42%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N++ I+E +F+KL L +I+ S +E + E L +
Sbjct: 407 ELRLNNNEISILEATG----MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSE-LHLTA 461
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N +++IR+ L L + L N+IS IHN+ F + RL + L +N + I
Sbjct: 462 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRL--LSLYDNQIATISPGA 519
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLPNLVK-L 392
F L+ L+T+ NLL + F N N L + + + K + N P+ ++ +
Sbjct: 520 FDTLQALSTL----NLLAN----PF-NCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQI 570
Query: 393 DLQDNKLKDFNLNVFSN----ITSKQTPMNLNLSNNYI--TNLY-ENDKKQAPIYIKSLD 445
LQD DF + Q P + + +N + + K P + L
Sbjct: 571 PLQDVAFPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELY 630
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L TF L+ + L N+I L ++F N+ L L L +N + +
Sbjct: 631 LDGNQFMLVPGQ-LSTFK-YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPP 688
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F G+ +L+++ L N+IS L F L L I N L
Sbjct: 689 LAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPL 731
Score = 142 (55.0 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 37/133 (27%), Positives = 70/133 (52%)
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
Q L L+NN I+ L + ++K ++LSNN++ E+ + A S+ +L+L
Sbjct: 403 QATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTA 461
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+++ + + F LD L L L +N I+ + +F G+ N++++ L N+I+ ++ F
Sbjct: 462 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFD 521
Query: 534 FSFKLRILNISHN 546
L LN+ N
Sbjct: 522 TLQALSTLNLLAN 534
Score = 111 (44.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 34/133 (25%), Positives = 65/133 (48%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P + + L N I+ +P + LR++ L N+I + AF L L L L
Sbjct: 172 PETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 230
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + + F G+ LQ++ L+ N+I+ + + F L +L++ N+++ L + F+
Sbjct: 231 NKITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFT 290
Query: 558 NT-IIEKLDISYN 569
+ I+ L ++ N
Sbjct: 291 SLRAIQTLHLAQN 303
Score = 101 (40.6 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
SN +Q +P + ++ +LYLD N+ L L+L+ L +N I+ +
Sbjct: 611 SNKHLQALP----KGIPKNVTELYLDGNQFM-LVPGQLSTFKYLQLVDLSNNKISSLSNS 665
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLD 565
+F M L + LS+N + + F LR+L++ N + +L +F++ T + L
Sbjct: 666 SFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLA 725
Query: 566 ISYN 569
I N
Sbjct: 726 IGAN 729
Score = 101 (40.6 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIAV 502
++ S+ ++ ++P Q A+ L L+ NEI L+AT F L L+ ++L +N ++
Sbjct: 387 VECSSLKLSKIPERIPQATAE----LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSE 442
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-I 561
+ F G ++ + L+ N++ + F LR L + +NR+ + D F+ +
Sbjct: 443 IEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNV 502
Query: 562 EKLDISYNQ-DKIRPG 576
L + NQ I PG
Sbjct: 503 RLLSLYDNQIATISPG 518
Score = 98 (39.6 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N+ + + EIRL N ++ I F ++L I LS N + I +F+ L ++ ++VL
Sbjct: 170 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY 229
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I + F L L L L NK+ + F ++ Q L+L +N I L +
Sbjct: 230 GNKITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDL---QNLSLLSLYDNKIQGLAK 286
Query: 432 NDKKQAPIYIKSLDLSNN 449
I++L L+ N
Sbjct: 287 GTFTSLRA-IQTLHLAQN 303
Score = 97 (39.2 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N IK+I + L I+L N+IS+I + F + + L +
Sbjct: 170 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQ-GL-RSLNSLV 227
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + ++ +F++L N+ + L N+I+ +
Sbjct: 228 LYGNKITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKG 287
Query: 382 AFVNLPNLVKLDLQDNK-LKDFNL 404
F +L + L L N + D NL
Sbjct: 288 TFTSLRAIQTLHLAQNPFICDCNL 311
Score = 89 (36.4 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELL 493
++ P L L+NN I + + L+K+ L N++ ++ AF G V EL
Sbjct: 399 ERIPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSEL- 457
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + F G+ L+ + L N IS + + F +R+L++ N++ ++
Sbjct: 458 HLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISP 517
Query: 554 DVF 556
F
Sbjct: 518 GAF 520
Score = 86 (35.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 26/113 (23%), Positives = 56/113 (49%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ-GIFN--SKLRELEITGKDLKFI 59
L L++N++S+L ++ +T L+ + + K +++ G F + + EL +T L+ I
Sbjct: 408 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 467
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLN 112
F +D TL + N +I + + F + N+ L L N+++ ++
Sbjct: 468 RSGMFRGLDGLR--TLMLRNNRISCIHNDSFTGLRNVR--LLSLYDNQIATIS 516
Score = 83 (34.3 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+I+ L +F+ L +L++++LS NK+ E+ F+ + L ++ + S
Sbjct: 413 NEISILEATGMFKKLTHLKKINLSNNKVS--EIEDGAFEGAASVSELHLTANQLESIRSG 470
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + L+ L L + NN I I N S L ++ ++L N+I+ I F
Sbjct: 471 MF---RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAF 520
Score = 79 (32.9 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N +++I +F+ ++ N+ L NQI I AF L L L L +N + ++
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVS 63
Query: 406 VFSNITSKQTPMNLNLSNNYI 426
F+++ +T L +N++
Sbjct: 64 SFNHMPKLRT---FRLHSNHL 81
Score = 78 (32.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N ++ I F +L + L N + I+ +F+ L + + L+ N I I +
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVS 63
Query: 382 AFVNLPNLVKLDLQDNKL 399
+F ++P L L N L
Sbjct: 64 SFNHMPKLRTFRLHSNHL 81
Score = 77 (32.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
LK ++L N + IE F L+ L +TL+ N + +I +SF ++ + L N +
Sbjct: 23 LKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHSNHL 81
Score = 73 (30.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N I+ I + T L + L+ N+IS I F + L+ + L+NN + I
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFR--ALRGLEVLTLNNNNISTIP 61
Query: 332 SDTFYNLKELNTITLSYNLL 351
+F ++ +L T L N L
Sbjct: 62 VSSFNHMPKLRTFRLHSNHL 81
Score = 72 (30.4 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
NK++++ F S+ + N E S + R N+I+ ++ + F
Sbjct: 438 NKVSEIEDGAFEGAA-SVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSF 496
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
L N++ LSL N QI ++ FD + L L + + FN N
Sbjct: 497 TGLRNVRLLSLYDN--QIATISPGAFDTLQALSTLNLLANPFNCN 539
Score = 71 (30.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS 252
NKITDL +F L+ LQ L L+ NK+ + D F+ LQ L + SL+++
Sbjct: 231 NKITDLPRGVFGGLFTLQLLLLNANKINCVRP-----DAFQDLQNLSL-LSLYDN 279
Score = 69 (29.3 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 221 FNKLQIIELNSNVF-----DVFEKLQLLEISFSLFNSN--EFPYYILNKNLNTLEWLAMD 273
+ KL+ I+L++N D F+ L+ L S L+ + + P + L TL+ L ++
Sbjct: 196 YRKLRRIDLSNNQISEIAPDAFQGLRSLN-SLVLYGNKITDLPRGVFG-GLFTLQLLLLN 253
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
N I +R + +L +L+ ++L NKI + F
Sbjct: 254 ANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTF 289
Score = 68 (29.0 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KLR ++++ + I P AF + + L L +I +LP G+F + + Q+ L L+
Sbjct: 198 KLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY--GNKITDLPRGVFGGLFTL-QLLL-LN 253
Query: 105 HNKLS 109
NK++
Sbjct: 254 ANKIN 258
Score = 63 (27.2 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L+ L +D N I I + L L + L N IS I + FN +L+ RL +N+
Sbjct: 23 LKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIP--VSSFNHMPKLRTFRLHSNH 80
Query: 327 L 327
L
Sbjct: 81 L 81
Score = 62 (26.9 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 26/105 (24%), Positives = 47/105 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVF---DVFEKLQLLEISFSLFNSNE 254
NK++++ F ++ EL L+ N+L+ I S +F D L L S +++
Sbjct: 438 NKVSEIEDGAFEGAASVSELHLTANQLESIR--SGMFRGLDGLRTLMLRNNRISCIHNDS 495
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
F L + L++ +N I I + L +L+ +NL N
Sbjct: 496 FT------GLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 534
Score = 57 (25.1 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
NKI + + F+ L NL LSL NK+Q L F +Q L ++ + F
Sbjct: 255 NKINCVRPDAFQDLQNLSLLSLYDNKIQ--GLAKGTFTSLRAIQTLHLAQNPF 305
Score = 51 (23.0 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 14/54 (25%), Positives = 32/54 (59%)
Query: 72 DL-TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQ 124
DL L++ QI + G F + +E +TL+ +N +S + +++ ++++ KL+
Sbjct: 22 DLKNLQLDKNQISCIEEGAFRALRGLEVLTLN--NNNISTIPVSS-FNHMPKLR 72
Score = 50 (22.7 bits), Expect = 6.3e-18, Sum P(3) = 6.3e-18
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI-SFSLF 250
N+I+ + FR L L+ L+L+ N + I ++S F+ KL+ + S LF
Sbjct: 31 NQISCIEEGAFRALRGLEVLTLNNNNISTIPVSS--FNHMPKLRTFRLHSNHLF 82
Score = 49 (22.3 bits), Expect = 8.0e-18, Sum P(3) = 8.0e-18
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
L LE L ++NNNI I S ++ L L N +
Sbjct: 44 LRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHSNHL 81
>ZFIN|ZDB-GENE-040220-4 [details] [associations]
symbol:tlr21 "toll-like receptor 21" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-4 GO:GO:0007165 InterPro:IPR003591
SMART:SM00369 GO:GO:0005622 GO:GO:0052033 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:BX571826 IPI:IPI00487094
RefSeq:NP_001186264.1 UniGene:Dr.161713 UniGene:Dr.85003
Ensembl:ENSDART00000060142 GeneID:402884 KEGG:dre:402884 CTD:402884
OMA:LTLDNSC NextBio:20816703 ArrayExpress:F1QMN8 Bgee:F1QMN8
Uniprot:F1QMN8
Length = 989
Score = 252 (93.8 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 135/532 (25%), Positives = 222/532 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
LDLS NKL+ L +T L +LG LK F +++L+++ D K +
Sbjct: 187 LDLSFNKLTTLQHSTHLPESLALLYLGDNKLKTLGCDKSFLMNVKKLDLS--DNKNLASK 244
Query: 63 AFDNI--DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNV 120
+F + + L L+ TN I +L + N+ +D S KL N
Sbjct: 245 SFLGLKLENITYLRLRFTNISIFKLLT-----YPNVHPWHIDFSGLKLK---------NS 290
Query: 121 TKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQV 180
L L ++++ + N I L N FR+ SI + + N
Sbjct: 291 HALSSL-CVLMRNHSHKHLQIPKMLLQSNSIGALKNNTFRYCP-SITREMDLSRNELKSA 348
Query: 181 SDREKXXXXXXXXXXRC--NKITDLNGNLFRHLYN-LQELSLSFNKLQIIELNSNVFDVF 237
+ + N +T L ++N L LS +N+ I++++ F
Sbjct: 349 GCLQFLHNQTQLKSLKMEHNHLTKLTSCNKAEIHNSLTNLSYRYNR--ILQISGYAFSNT 406
Query: 238 EKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLE 297
KL++LE++ ++ + + L+ L L+ L +DNN + +I N S +LT+L +NL
Sbjct: 407 PKLEILELNINIIAYMD--HKALS-GLKDLKTLRLDNNLLSDIYNDSFEDLTNLKTLNLR 463
Query: 298 YNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTT 357
N+I+ I N F N+ K L + L N + ++ F L L + L N LK I
Sbjct: 464 NNEIAVIFNYTFQ-NLSK-LDILDLGGNKISQLKPHAFDGLYSLTNLYLDRNHLKMIDVV 521
Query: 358 SFKNLNNMLNIV-LSFNQIKYIYPNA---FVNLPNLVKLDLQDNKLKDFNL---NVFSNI 410
F L+ L ++ L N I Y + F N+ L L L + NL F +
Sbjct: 522 LFGKLSGTLQVLDLQGNMIMYFTEHTHSPFKNMSRLYDLKLNGQQPNGINLLPRAFFRGL 581
Query: 411 TSKQTPMNLNLSNNYITNLYE---NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
TS ++ L L+NN+I + +D K Y+ +LD S + ++ ++ LR
Sbjct: 582 TSLKS---LYLTNNHIIGFGDETFDDLKNLD-YL-TLDNSCAGVAQLQSGIFKSL-QKLR 635
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
L L+ IK FGNL L+ L L N + + + NL ID+
Sbjct: 636 TLSLENMGIKSFSKDVFGNLTGLKTLHLNRNPMMSLDISLLDNLTNLIYIDM 687
Score = 237 (88.5 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 137/568 (24%), Positives = 239/568 (42%)
Query: 21 NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNT 80
N+T + H ++ + N L L + + ID AF+N+ L L N
Sbjct: 64 NLT-ISHSNIEYVQSQSFDHLPN--LTALILDANHITNIDKDAFNNLHHLQTLNLSCNN- 119
Query: 81 QIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQ-------HL-GTTILK 132
I L +F + N+ Q+ L NKL+ + L+S++T L+ HL + +
Sbjct: 120 -ISFLHRDVFSDLHNLTQLLL--GSNKLTNPDKY-LFSSLTNLKILDLRRNHLYNFSSVV 175
Query: 133 DREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXX 192
+ NK+T L + HL +S+ +N + D+
Sbjct: 176 ESITNLTSLIKLDLSFNKLTTLQHST--HLPESLALLYLGDNKLKTLGCDKSFLMNVKKL 233
Query: 193 XXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIEL----NSNVFDV-FEKLQLLEISF 247
NK L L N+ L L F + I +L N + + + F L+L S
Sbjct: 234 DLSD-NKNLASKSFLGLKLENITYLRLRFTNISIFKLLTYPNVHPWHIDFSGLKLKN-SH 291
Query: 248 SLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNY-INLEYNKISKIHN 306
+L + +K+L + L + +N+I ++N + S+ ++L N++
Sbjct: 292 ALSSLCVLMRNHSHKHLQIPKML-LQSNSIGALKNNTFRYCPSITREMDLSRNELKSAGC 350
Query: 307 NLFHFNIHKRLKEIRLSNNYLELIESDTFYNL-KELNTITLSYNLLKSIKTTSFKNLNNM 365
F N +LK +++ +N+L + S + L ++ YN + I +F N +
Sbjct: 351 LQFLHN-QTQLKSLKMEHNHLTKLTSCNKAEIHNSLTNLSYRYNRILQISGYAFSNTPKL 409
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
+ L+ N I Y+ A L +L L L +N L D + F ++T+ +T LNL NN
Sbjct: 410 EILELNINIIAYMDHKALSGLKDLKTLRLDNNLLSDIYNDSFEDLTNLKT---LNLRNNE 466
Query: 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAF 484
I ++ N Q + LDL N+I ++ P F + SL LYLD N +K +D F
Sbjct: 467 IAVIF-NYTFQNLSKLDILDLGGNKISQLKPHAFDGLY--SLTNLYLDRNHLKMIDVVLF 523
Query: 485 GNLD-VLELLSLEHNNIAVVVKRTFIGMPNL-QIIDLSFNE-----ISMLTGEQFYFSFK 537
G L L++L L+ N I + T N+ ++ DL N I++L F
Sbjct: 524 GKLSGTLQVLDLQGNMIMYFTEHTHSPFKNMSRLYDLKLNGQQPNGINLLPRAFFRGLTS 583
Query: 538 LRILNISHNRLRSLPRDVFSNTIIEKLD 565
L+ L +++N + + F + ++ LD
Sbjct: 584 LKSLYLTNNHIIGFGDETFDD--LKNLD 609
Score = 232 (86.7 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 102/373 (27%), Positives = 168/373 (45%)
Query: 198 NKITDLNGNLFRHLYNL-QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N I L N FR+ ++ +E+ LS N+L+ ++ L+ S + +++
Sbjct: 318 NSIGALKNNTFRYCPSITREMDLSRNELK----SAGCLQFLHNQTQLK-SLKMEHNHLTK 372
Query: 257 YYILNKNL--NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI-HNNLFHFNI 313
NK N+L L+ N I I Y+ N L + L N I+ + H L
Sbjct: 373 LTSCNKAEIHNSLTNLSYRYNRILQISGYAFSNTPKLEILELNINIIAYMDHKALSGL-- 430
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
K LK +RL NN L I +D+F +L L T+ L N + I +F+NL+ + + L N
Sbjct: 431 -KDLKTLRLDNNLLSDIYNDSFEDLTNLKTLNLRNNEIAVIFNYTFQNLSKLDILDLGGN 489
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
+I + P+AF L +L L L N LK ++ +F ++ T L+L N I +Y +
Sbjct: 490 KISQLKPHAFDGLYSLTNLYLDRNHLKMIDVVLFGKLSG--TLQVLDLQGNMI--MYFTE 545
Query: 434 KKQAPIYIKS--LDLSNNRIQEVPVNFL-QTF---ADSLRKLYLDFNEIKHLDATAFGNL 487
+P S DL N Q +N L + F SL+ LYL N I F +L
Sbjct: 546 HTHSPFKNMSRLYDLKLNGQQPNGINLLPRAFFRGLTSLKSLYLTNNHIIGFGDETFDDL 605
Query: 488 DVLELLSLEHN--NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
L+ L+L+++ +A + F + L+ + L I + + F L+ L+++
Sbjct: 606 KNLDYLTLDNSCAGVAQLQSGIFKSLQKLRTLSLENMGIKSFSKDVFGNLTGLKTLHLNR 665
Query: 546 NRLRSLPRDVFSN 558
N + SL + N
Sbjct: 666 NPMMSLDISLLDN 678
Score = 202 (76.2 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 97/383 (25%), Positives = 174/383 (45%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEF 255
CN I+ L+ ++F L+NL +L L NKL + +F L++L++ + L+N +
Sbjct: 117 CNNISFLHRDVFSDLHNLTQLLLGSNKLT--NPDKYLFSSLTNLKILDLRRNHLYNFSSV 174
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH-NNLFHFNIH 314
I N L +L L + N + ++ +S + SL + L NK+ + + F N+
Sbjct: 175 VESITN--LTSLIKLDLSFNKLTTLQ-HSTHLPESLALLYLGDNKLKTLGCDKSFLMNV- 230
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN--NMLNIVLSF 372
K++ LS+N + + S +F LK L IT Y L+ + FK L N+ + F
Sbjct: 231 ---KKLDLSDN--KNLASKSFLGLK-LENIT--YLRLRFTNISIFKLLTYPNVHPWHIDF 282
Query: 373 NQIKYIYPNAFVNLPNLVK------LDLQDNKLKDFNLNVFSNITSKQTPM---NLNLSN 423
+ +K +A +L L++ L + L+ ++ N T + P ++LS
Sbjct: 283 SGLKLKNSHALSSLCVLMRNHSHKHLQIPKMLLQSNSIGALKNNTFRYCPSITREMDLSR 342
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N + + +KSL + +N + ++ +SL L +N I + A
Sbjct: 343 NELKSAGCLQFLHNQTQLKSLKMEHNHLTKLTSCNKAEIHNSLTNLSYRYNRILQISGYA 402
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNI 543
F N LE+L L N IA + + G+ +L+ + L N +S + + F L+ LN+
Sbjct: 403 FSNTPKLEILELNINIIAYMDHKALSGLKDLKTLRLDNNLLSDIYNDSFEDLTNLKTLNL 462
Query: 544 SHNRLRSLPRDVFSNTIIEKLDI 566
+N + + F N + KLDI
Sbjct: 463 RNNEIAVIFNYTFQN--LSKLDI 483
Score = 201 (75.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 118/499 (23%), Positives = 214/499 (42%)
Query: 73 LTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNM-ATLYSNVTKLQHLGTT-- 129
L L I+++ IE + S FD + N+ + LD +H + N+ ++N+ LQ L +
Sbjct: 63 LNLTISHSNIEYVQSQSFDHLPNLTALILDANH----ITNIDKDAFNNLHHLQTLNLSCN 118
Query: 130 ----ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQK-SIVKAKKNNNNNEDQVSDRE 184
+ +D NK+T+ + LF L I+ ++N+ N V +
Sbjct: 119 NISFLHRDVFSDLHNLTQLLLGSNKLTNPDKYLFSSLTNLKILDLRRNHLYNFSSVVESI 178
Query: 185 KXXXXXXXXXXRCNKITDLNGNLFRHL-YNLQELSLSFNKLQIIELNSNVFDVFEKLQLL 243
NK+T L + HL +L L L NKL+ + + + +KL L
Sbjct: 179 TNLTSLIKLDLSFNKLTTLQHST--HLPESLALLYLGDNKLKTLGCDKSFLMNVKKLDLS 236
Query: 244 EISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISK 303
+ N N L L + +L + NI + + N+ +I+ K+
Sbjct: 237 D------NKNLASKSFLGLKLENITYLRLRFTNISIFKLLTYPNVHPW-HIDFSGLKLKN 289
Query: 304 IH--NNLF-----HFNIHKRLKEIRLSNNYLELIESDTF-YNLKELNTITLSYNLLKSIK 355
H ++L H + H ++ ++ L +N + ++++TF Y + LS N LKS
Sbjct: 290 SHALSSLCVLMRNHSHKHLQIPKMLLQSNSIGALKNNTFRYCPSITREMDLSRNELKSAG 349
Query: 356 TTSF-KNLNNMLNIVLSFNQIKYIYPNAFVNLPN-LVKLDLQDNKLKDFNLNVFSNITSK 413
F N + ++ + N + + + N L L + N++ + FSN T K
Sbjct: 350 CLQFLHNQTQLKSLKMEHNHLTKLTSCNKAEIHNSLTNLSYRYNRILQISGYAFSN-TPK 408
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFAD--SLRKLY 470
+ LN+ N I Y + K + + +K+L L NN + ++ + +F D +L+ L
Sbjct: 409 LEILELNI--NIIA--YMDHKALSGLKDLKTLRLDNNLLSDI---YNDSFEDLTNLKTLN 461
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
L NEI + F NL L++L L N I+ + F G+ +L + L N + M+
Sbjct: 462 LRNNEIAVIFNYTFQNLSKLDILDLGGNKISQLKPHAFDGLYSLTNLYLDRNHLKMIDVV 521
Query: 531 QF-YFSFKLRILNISHNRL 548
F S L++L++ N +
Sbjct: 522 LFGKLSGTLQVLDLQGNMI 540
Score = 197 (74.4 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 92/340 (27%), Positives = 162/340 (47%)
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN 287
++ + V DVF L IS S + E+ +L L L +D N+I NI + N
Sbjct: 50 DITAIVSDVFPTALNLTISHS---NIEYVQSQSFDHLPNLTALILDANHITNIDKDAFNN 106
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
L L +NL N IS +H ++F ++H L ++ L +N L + F +L L + L
Sbjct: 107 LHHLQTLNLSCNNISFLHRDVFS-DLHN-LTQLLLGSNKLTNPDKYLFSSLTNLKILDLR 164
Query: 348 YNLLKSIKTT--SFKNLNNMLNIVLSFNQIKYIYPNAFVNLP-NLVKLDLQDNKLKDFNL 404
N L + + S NL +++ + LSFN++ + + +LP +L L L DNKLK
Sbjct: 165 RNHLYNFSSVVESITNLTSLIKLDLSFNKLTTLQHST--HLPESLALLYLGDNKLKTLGC 222
Query: 405 NVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD 464
+ + K+ L+LS+N NL K + ++++ R + + L T+ +
Sbjct: 223 DKSFLMNVKK----LDLSDN--KNLAS--KSFLGLKLENITYLRLRFTNISIFKLLTYPN 274
Query: 465 SLRKLYLDFNEIKHLDATAFGNLDVL---------EL--LSLEHNNIAVVVKRTFIGMPN 513
+ ++DF+ +K ++ A +L VL ++ + L+ N+I + TF P+
Sbjct: 275 -VHPWHIDFSGLKLKNSHALSSLCVLMRNHSHKHLQIPKMLLQSNSIGALKNNTFRYCPS 333
Query: 514 L-QIIDLSFNEISMLTGEQFYFS-FKLRILNISHNRLRSL 551
+ + +DLS NE+ QF + +L+ L + HN L L
Sbjct: 334 ITREMDLSRNELKSAGCLQFLHNQTQLKSLKMEHNHLTKL 373
Score = 196 (74.1 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 74/276 (26%), Positives = 140/276 (50%)
Query: 289 TSLNYINLEYNKISKIHNNLF-HFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
T+LN + + ++ I + + F H L + L N++ I+ D F NL L T+ LS
Sbjct: 61 TALN-LTISHSNIEYVQSQSFDHL---PNLTALILDANHITNIDKDAFNNLHHLQTLNLS 116
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N + + F +L+N+ ++L N++ F +L NL LDL+ N L +F+ +V
Sbjct: 117 CNNISFLHRDVFSDLHNLTQLLLGSNKLTNPDKYLFSSLTNLKILDLRRNHLYNFS-SVV 175
Query: 408 SNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
+IT+ + + L+LS N +T L + P + L L +N+++ + + ++F +++
Sbjct: 176 ESITNLTSLIKLDLSFNKLTTLQHST--HLPESLALLYLGDNKLKTLGCD--KSFLMNVK 231
Query: 468 KLYLDFNEIKHLDATAF-G-NLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
KL D ++ K+L + +F G L+ + L L NI++ T+ PN+ + F+ +
Sbjct: 232 KL--DLSDNKNLASKSFLGLKLENITYLRLRFTNISIFKLLTY---PNVHPWHIDFSGLK 286
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVF-SNTI 560
L S + + N SH L+ +P+ + SN+I
Sbjct: 287 -LKNSHALSSLCVLMRNHSHKHLQ-IPKMLLQSNSI 320
Score = 132 (51.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 92/398 (23%), Positives = 171/398 (42%)
Query: 47 RELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
RE++++ +LK F + +LK+ + + +L S +K E +T +LS+
Sbjct: 336 REMDLSRNELKSAGCLQFLHNQTQLK-SLKMEHNHLTKLTS--CNKAEIHNSLT-NLSYR 391
Query: 107 KLSVLNMATL-YSNVTKLQ--HLGTTILK--DREKXXXXXXXXXXRC--NKITDLNGNLF 159
+L ++ +SN KL+ L I+ D + R N ++D+ + F
Sbjct: 392 YNRILQISGYAFSNTPKLEILELNINIIAYMDHKALSGLKDLKTLRLDNNLLSDIYNDSF 451
Query: 160 RHLQKSIVKAKKNNNNNEDQV--SDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQEL 217
L +K N NNE V + + NKI+ L + F LY+L L
Sbjct: 452 EDLTN--LKTL-NLRNNEIAVIFNYTFQNLSKLDILDLGGNKISQLKPHAFDGLYSLTNL 508
Query: 218 SLSFNKLQIIELNSNVFDVFE-KLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN-- 274
L N L++I++ +F LQ+L++ ++ + KN++ L L ++
Sbjct: 509 YLDRNHLKMIDVV--LFGKLSGTLQVLDLQGNMIMYFTEHTHSPFKNMSRLYDLKLNGQQ 566
Query: 275 -NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL--IE 331
N I + LTSL + L N I + F ++ K L + L N+ + ++
Sbjct: 567 PNGINLLPRAFFRGLTSLKSLYLTNNHIIGFGDETFD-DL-KNLDYLTLDNSCAGVAQLQ 624
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
S F +L++L T++L +KS F NL + + L+ N + + + NL NL+
Sbjct: 625 SGIFKSLQKLRTLSLENMGIKSFSKDVFGNLTGLKTLHLNRNPMMSLDISLLDNLTNLIY 684
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+D++ L + ++ T MN L ++ N+
Sbjct: 685 IDMRSCPL---SCGCHNSDLQNWTIMNKRLQFPHLFNI 719
Score = 131 (51.2 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 66/252 (26%), Positives = 121/252 (48%)
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ-IKYIYPNAFVNL 386
+LI TF L +L SY+ I+ N + + V S+ + I I + F
Sbjct: 8 KLILKATFICLIKL---ACSYSFRSCIEIPD-SN-HTIFTCVKSYERDITAIVSDVF--- 59
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
P + L + + ++ F ++ + L L N+ITN+ + D ++++L+L
Sbjct: 60 PTALNLTISHSNIEYVQSQSFDHLPNLTA---LILDANHITNI-DKDAFNNLHHLQTLNL 115
Query: 447 SNNRIQEVPVNFLQ--TFAD--SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN---N 499
S N I +FL F+D +L +L L N++ + D F +L L++L L N N
Sbjct: 116 SCNNI-----SFLHRDVFSDLHNLTQLLLGSNKLTNPDKYLFSSLTNLKILDLRRNHLYN 170
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
+ VV+ + + +L +DLSFN+++ L + L +L + N+L++L D
Sbjct: 171 FSSVVE-SITNLTSLIKLDLSFNKLTTLQ-HSTHLPESLALLYLGDNKLKTLGCDKSFLM 228
Query: 560 IIEKLDISYNQD 571
++KLD+S N++
Sbjct: 229 NVKKLDLSDNKN 240
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 247 (92.0 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 72/253 (28%), Positives = 126/253 (49%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +N IS++ ++ F F +L + L +N + + D F L +L + LS N +
Sbjct: 67 LSLRHNSISELSSDQF-FGF-TQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITK 124
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ T+F +L N+ + LSFNQ+ + P F L L L L+ N L+ + F + S
Sbjct: 125 LPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSL 184
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
+ L LSNN + +L N I ++ L L +N + ++ + +L+ LYL +
Sbjct: 185 EY---LGLSNNRLRSLARNGFAGL-IKLRELHLEHNHLTKINLAHFPRLV-ALQFLYLQW 239
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+I +L +T LE L L N I V++ F +P+L+I+ L N++S L +
Sbjct: 240 NKINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNLDSQTMD 299
Query: 534 FSFKLRILNISHN 546
L ++ +S N
Sbjct: 300 MWKSLNVIGLSSN 312
Score = 224 (83.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 64/253 (25%), Positives = 133/253 (52%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ +N+I + + + T L +++L++N+I+ +H + F ++K LK++ LS+N +
Sbjct: 67 LSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQ-GLYK-LKDLNLSSNRITK 124
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ + TF +L L + LS+N + +++ F L + + L N ++ AF + +L
Sbjct: 125 LPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSL 184
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L L +N+L+ N F+ + + L+L +N++T + + + ++ L L N
Sbjct: 185 EYLGLSNNRLRSLARNGFAGLIKLR---ELHLEHNHLTKINLAHFPRL-VALQFLYLQWN 240
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+I + + ++ +L KL L NEI+ L F L L++L L++N ++ + +T
Sbjct: 241 KINNL-TSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNLDSQTMD 299
Query: 510 GMPNLQIIDLSFN 522
+L +I LS N
Sbjct: 300 MWKSLNVIGLSSN 312
Score = 218 (81.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 67/233 (28%), Positives = 114/233 (48%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK-RLKEIRLSNN 325
L WL +D+N I + + L L +NL N+I+K+ N F IH L+ + LS N
Sbjct: 88 LTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTF---IHLINLQILDLSFN 144
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
+ +E + F+ L++L + L N L++ +F + ++ + LS N+++ + N F
Sbjct: 145 QMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNNRLRSLARNGFAG 204
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLD 445
L L +L L+ N L NL F + + Q L L N I NL + + ++ LD
Sbjct: 205 LIKLRELHLEHNHLTKINLAHFPRLVALQF---LYLQWNKINNLTSTMEWKWTT-LEKLD 260
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
L+ N I+ + +T SL+ L LD N++ +LD+ L ++ L N
Sbjct: 261 LTGNEIRVLIPEVFETLP-SLKILLLDNNKLSNLDSQTMDMWKSLNVIGLSSN 312
Score = 192 (72.6 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 61/232 (26%), Positives = 111/232 (47%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L +N + + SD F+ +L + L +N + ++ +F+ L + ++ LS N+I +
Sbjct: 67 LSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLP 126
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
F++L NL LDL N++ +F + Q L+L +N +
Sbjct: 127 NTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQI---LHLRSNSLRTTPVRAFWDCRS 183
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ L LSNNR++ + N LR+L+L+ N + ++ F L L+ L L+ N
Sbjct: 184 -LEYLGLSNNRLRSLARNGFAGLI-KLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNK 241
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
I + L+ +DL+ NEI +L E F L+IL + +N+L +L
Sbjct: 242 INNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNL 293
Score = 167 (63.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 48/128 (37%), Positives = 71/128 (55%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L +N I E+ + F L L+LD N+I + AF L L+ L+L N I +
Sbjct: 67 LSLRHNSISELSSDQFFGFTQ-LTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKL 125
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP-RDVFSNTIIE 562
TFI + NLQI+DLSFN+++ L E F+ KL+IL++ N LR+ P R + +E
Sbjct: 126 PNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLE 185
Query: 563 KLDISYNQ 570
L +S N+
Sbjct: 186 YLGLSNNR 193
Score = 166 (63.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 59/215 (27%), Positives = 101/215 (46%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
++L +N + + + F + + L NQI ++ +AF L L L+L N++
Sbjct: 67 LSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLP 126
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFA 463
F ++ + Q L+LS N +T L E + ++ L L +N ++ PV + F
Sbjct: 127 NTTFIHLINLQI---LDLSFNQMTAL-EPELFHGLRKLQILHLRSNSLRTTPV---RAFW 179
Query: 464 D--SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
D SL L L N ++ L F L L L LEHN++ + F + LQ + L +
Sbjct: 180 DCRSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQW 239
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N+I+ LT + L L+++ N +R L +VF
Sbjct: 240 NKINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVF 274
Score = 165 (63.1 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 51/179 (28%), Positives = 91/179 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI-SFSLFNSNEFP 256
N+IT L F HL NLQ L LSFN++ +E +F KLQ+L + S SL +
Sbjct: 120 NRITKLPNTTFIHLINLQILDLSFNQMTALE--PELFHGLRKLQILHLRSNSLRTTPVRA 177
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
++ + +LE+L + NN ++++ L L ++LE+N ++KI NL HF
Sbjct: 178 FW----DCRSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKI--NLAHFPRLVA 231
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+ + L N + + S + L + L+ N ++ + F+ L ++ ++L N++
Sbjct: 232 LQFLYLQWNKINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKL 290
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/239 (26%), Positives = 110/239 (46%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
L LS I EL+S+ F F +L L + + + + + L L+ L + +N
Sbjct: 65 LGLSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAF---QGLYKLKDLNLSSNR 121
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
I + N + +L +L ++L +N+++ + LFH + K L+ + L +N L F+
Sbjct: 122 ITKLPNTTFIHLINLQILDLSFNQMTALEPELFH-GLRK-LQILHLRSNSLRTTPVRAFW 179
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
+ + L + LS N L+S+ F L + + L N + I F L L L LQ
Sbjct: 180 DCRSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQW 239
Query: 397 NKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
NK+ N+ S + K T + L+L+ N I L + P +K L L NN++ +
Sbjct: 240 NKIN----NLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPS-LKILLLDNNKLSNL 293
Score = 146 (56.5 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 47/154 (30%), Positives = 75/154 (48%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+ L+L +N I+ L +D+ + L L +N+I V + Q L+ L L N I
Sbjct: 65 LGLSLRHNSISEL-SSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLY-KLKDLNLSSNRI 122
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
L T F +L L++L L N + + F G+ LQI+ L N + F+
Sbjct: 123 TKLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCR 182
Query: 537 KLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
L L +S+NRLRSL R+ F+ I + +L + +N
Sbjct: 183 SLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHN 216
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 162 (62.1 bits), Expect = 7.1e-18, Sum P(3) = 7.1e-18
Identities = 51/162 (31%), Positives = 85/162 (52%)
Query: 274 NNNIKNIRNYSLYNL-TSL----NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + T+L I LE N I I F + +K+L+ + LSNN +
Sbjct: 198 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAF--SPYKKLRRLDLSNNQIS 255
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ D F L+ LN++ L N + + + F+ L ++ ++L+ N+I + +AF +L N
Sbjct: 256 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 315
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
L L L DNKL+ FS + + QT M+L N +I + +
Sbjct: 316 LNLLSLYDNKLQTVAKGTFSALRAIQT-MHL-AQNPFICDCH 355
Score = 133 (51.9 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 50/185 (27%), Positives = 80/185 (43%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L ++NN + ++ L L INL NKI+ I F + EI L++N LE
Sbjct: 448 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGA--SGVNEILLTSNRLE 505
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
++ F L+ L T+ L N + + SF L ++ + L NQI + P AF L +
Sbjct: 506 NVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHS 565
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L L+L N FN N + +T N + Q P ++K + + +
Sbjct: 566 LSTLNLLANP---FNCNCHLAWLGEWLRRK-----RIVTG---NPRCQKPYFLKEIPIQD 614
Query: 449 NRIQE 453
IQ+
Sbjct: 615 VAIQD 619
Score = 131 (51.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 38/127 (29%), Positives = 66/127 (51%)
Query: 299 NKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS 358
NKIS I F ++ K L+ +RL+ N L+L F +L + LS N +++I +
Sbjct: 3 NKISTIERGAFQ-DL-KELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKA 60
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
F+ ++ N+ L +NQI I AF L +L L L +N + ++ F+++ +T
Sbjct: 61 FRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT-FR 119
Query: 419 LNLSNNY 425
L+ +N Y
Sbjct: 120 LHSNNLY 126
Score = 130 (50.8 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 297 EYNKISKIHNNLFHF----NIHKRLKEIR---LSNNYLELIESDTFYNLKELNTITLSYN 349
+Y +++NN F I K+L ++R LSNN + IE F +N I L+ N
Sbjct: 443 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSN 502
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L++++ FK L ++ ++L N+I + ++F L ++ L L DN++ F
Sbjct: 503 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGT 562
Query: 410 ITSKQTPMNLNLSNNYITNLY 430
+ S T +NL L+N + N +
Sbjct: 563 LHSLST-LNL-LANPFNCNCH 581
Score = 129 (50.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P I + L N I+ +P + LR+L L N+I L AF L L L L
Sbjct: 217 PETITEIRLEQNSIRVIPPGAFSPYK-KLRRLDLSNNQISELAPDAFQGLRSLNSLVLYG 275
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + K F G+ +LQ++ L+ N+I+ L + F L +L++ N+L+++ + FS
Sbjct: 276 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFS 335
Query: 558 NT-IIEKLDISYN 569
I+ + ++ N
Sbjct: 336 ALRAIQTMHLAQN 348
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 37/129 (28%), Positives = 62/129 (48%)
Query: 396 DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
+NK+ F ++ + + LN +N L+ + LDLS N+IQ +P
Sbjct: 2 ENKISTIERGAFQDLKELER-LRLNRNN---LQLFPELLFLGTAKLYRLDLSENQIQAIP 57
Query: 456 VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
+ D ++ L LD+N+I ++ AF L LE+L+L +NNI + +F MP L+
Sbjct: 58 RKAFRGAVD-IKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLR 116
Query: 516 IIDLSFNEI 524
L N +
Sbjct: 117 TFRLHSNNL 125
Score = 117 (46.2 bits), Expect = 7.1e-18, Sum P(3) = 7.1e-18
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 414 QTPMNLNLSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
Q L L+NN T L K+ P ++ ++LSNN+I ++ + A + ++ L
Sbjct: 443 QYTAELRLNNNEFTVLEATGIFKKLP-QLRKINLSNNKITDIEEGAFEG-ASGVNEILLT 500
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++++ F L+ L+ L L N I+ V +F G+ +++++ L N+I+ + F
Sbjct: 501 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAF 560
Query: 533 YFSFKLRILNISHN 546
L LN+ N
Sbjct: 561 GTLHSLSTLNLLAN 574
Score = 107 (42.7 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 37/148 (25%), Positives = 71/148 (47%)
Query: 226 IIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSL 285
+ E+ +N+ + +++L + S + F Y K L L+ + NN I + +
Sbjct: 209 LTEIPTNLPETITEIRLEQNSIRVIPPGAFSPY---KKLRRLD---LSNNQISELAPDAF 262
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
L SLN + L NKI+++ +LF +L + L+ N + + D F +L LN ++
Sbjct: 263 QGLRSLNSLVLYGNKITELPKSLFEGLFSLQL--LLLNANKINCLRVDAFQDLHNLNLLS 320
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L N L+++ +F L + + L+ N
Sbjct: 321 LYDNKLQTVAKGTFSALRAIQTMHLAQN 348
Score = 102 (41.0 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y L L+NN + + LRK+ L N+I ++ AF G V E+L L
Sbjct: 442 PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEIL-LT 500
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + V + F G+ +L+ + L N IS + + F +R+L++ N++ ++ F
Sbjct: 501 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAF 560
Score = 100 (40.3 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIA 501
++D SN ++ ++P + Q A+ L L+ NE L+AT F L L ++L +N I
Sbjct: 426 TVDCSNQKLNKIPDHIPQYTAE----LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKIT 481
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-I 560
+ + F G + I L+ N + + + F L+ L + NR+ + D F+
Sbjct: 482 DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGS 541
Query: 561 IEKLDISYNQ-DKIRPG 576
+ L + NQ + PG
Sbjct: 542 VRLLSLYDNQITTVAPG 558
Score = 86 (35.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
NKI+ + F+ L L+ L L+ N LQ+ EL +F KL L++S + + P
Sbjct: 3 NKISTIERGAFQDLKELERLRLNRNNLQLFPEL---LFLGTAKLYRLDLSENQIQA--IP 57
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
++ ++ L +D N I I + + L L + L N I+++ ++ FN +
Sbjct: 58 RKAFRGAVD-IKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRL--SVASFNHMPK 114
Query: 317 LKEIRLSNNYL 327
L+ RL +N L
Sbjct: 115 LRTFRLHSNNL 125
Score = 80 (33.2 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 40 GIFN--SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F+ KLR L+++ + + P AF + + L L +I ELP LF+ + +++
Sbjct: 236 GAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY--GNKITELPKSLFEGLFSLQ 293
Query: 98 QMTLDLSH-NKLSV--------LNMATLYSNVTKLQ 124
+ L+ + N L V LN+ +LY N KLQ
Sbjct: 294 LLLLNANKINCLRVDAFQDLHNLNLLSLYDN--KLQ 327
Score = 74 (31.1 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
K + + +NN + D + NKIT+L +LF L++LQ L L+ NK
Sbjct: 242 KKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 301
Query: 224 LQIIELNSNVFDVFEKLQLLEI 245
+ + +++ F L LL +
Sbjct: 302 INCLRVDA--FQDLHNLNLLSL 321
Score = 64 (27.6 bits), Expect = 7.1e-18, Sum P(3) = 7.1e-18
Identities = 26/121 (21%), Positives = 62/121 (51%)
Query: 8 NKLSVLNMATLYSNVTKLQHLG---TTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAF 64
NK+S + + ++ +L+ L + +L + +KL L+++ ++ I AF
Sbjct: 3 NKISTIERGA-FQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAF 61
Query: 65 DNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKL 123
D+ L++ QI + G F + ++E +TL+ +N ++ L++A+ ++++ KL
Sbjct: 62 RG---AVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN--NNNITRLSVAS-FNHMPKL 115
Query: 124 Q 124
+
Sbjct: 116 R 116
Score = 38 (18.4 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 20/98 (20%), Positives = 40/98 (40%)
Query: 81 QIEELPSGLFDKIENIEQMTLDLSH----NKLSVLNMATLYSNVTKLQHLGTTILKDREK 136
+I + G F ++ +E++ L+ ++ +L L A LY + ++ I + +
Sbjct: 4 KISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLY-RLDLSENQIQAIPRKAFR 62
Query: 137 XXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNN 174
N+I+ + FR L+ V NNN
Sbjct: 63 GAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNN 100
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 247 (92.0 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 86/328 (26%), Positives = 152/328 (46%)
Query: 221 FNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
F Q+ + + F +L+ LE++ S F + + NL +L L ++ N ++ +
Sbjct: 80 FLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIF---SNLTSLGKLTLNFNMLEAL 136
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE 340
+L +L ++L+ N++ + LF H LK + L+ N L + + F+ L
Sbjct: 137 PEGLFQHLAALESLHLQGNQLQALPRRLFQPLTH--LKTLNLAQNLLAQLPEELFHPLTS 194
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
L T+ LS N L + F L ++ + L N I + P F L L +L LQ N +
Sbjct: 195 LQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAIT 254
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQ 460
L++F+++ + L+L N + L P + L L++N+++ V
Sbjct: 255 HLPLSIFASLGNLTF---LSLQWNMLRVLPAGLFAHTPCLV-GLSLTHNQLETVAEG--- 307
Query: 461 TFA--DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
TFA +LR L L +N I HL A F +L+ L L L NN+ + F + L+++
Sbjct: 308 TFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLS 367
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHN 546
LS N+++ L F ++ L L + N
Sbjct: 368 LSKNQLTTLPEGIFDTNYNLFNLALHGN 395
Score = 239 (89.2 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 73/250 (29%), Positives = 128/250 (51%)
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
RL+++ ++ + + ++ F NL L +TL++N+L+++ F++L + ++ L NQ+
Sbjct: 98 RLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQL 157
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + F L +L L+L N L +F +TS QT L LSNN ++ L +
Sbjct: 158 QALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQT---LKLSNNALSGLPQGVFG 214
Query: 436 QAPIYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
+ ++ L L +N I E+P F Q F L +L+L N I HL + F +L L LS
Sbjct: 215 KLGS-LQELFLDSNNISELPPQVFSQLFC--LERLWLQRNAITHLPLSIFASLGNLTFLS 271
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
L+ N + V+ F P L + L+ N++ + F LR L +S+N + LP
Sbjct: 272 LQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAG 331
Query: 555 VFSNTIIEKL 564
+F + +E+L
Sbjct: 332 IFRD--LEEL 339
Score = 235 (87.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 72/261 (27%), Positives = 125/261 (47%)
Query: 311 FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
F + L ++ N L D F L L + ++ + ++ T F NL ++ + L
Sbjct: 69 FGSNPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTL 128
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
+FN ++ + F +L L L LQ N+L+ +F +T +T LNL+ N + L
Sbjct: 129 NFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKT---LNLAQNLLAQLP 185
Query: 431 ENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
E + P+ +++L LSNN + +P SL++L+LD N I L F L
Sbjct: 186 E--ELFHPLTSLQTLKLSNNALSGLPQGVFGKLG-SLQELFLDSNNISELPPQVFSQLFC 242
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
LE L L+ N I + F + NL + L +N + +L F + L L+++HN+L
Sbjct: 243 LERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLE 302
Query: 550 SLPRDVFSN-TIIEKLDISYN 569
++ F++ + + L +SYN
Sbjct: 303 TVAEGTFAHLSNLRSLMLSYN 323
Score = 209 (78.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 78/294 (26%), Positives = 127/294 (43%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH-KRLKEIRL 322
L LE L + ++ N+ NLTSL + L +N + + LF H L+ + L
Sbjct: 96 LPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQ---HLAALESLHL 152
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
N L+ + F L L T+ L+ NLL + F L ++ + LS N + +
Sbjct: 153 QGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGV 212
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F L +L +L L N + + VFS + + L L N IT+L + +
Sbjct: 213 FGKLGSLQELFLDSNNISELPPQVFSQLFCLE---RLWLQRNAITHLPLSIFASLG-NLT 268
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L L N ++ +P L L L L N+++ + F +L L L L +N I
Sbjct: 269 FLSLQWNMLRVLPAG-LFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITH 327
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ F + L + L N ++ L F KL +L++S N+L +LP +F
Sbjct: 328 LPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIF 381
Score = 195 (73.7 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 67/238 (28%), Positives = 108/238 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L LF L +LQ L LS N L L VF LQ E+ N +E P
Sbjct: 179 NLLAQLPEELFHPLTSLQTLKLSNNALS--GLPQGVFGKLGSLQ--ELFLDSNNISELPP 234
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ ++ L LE L + N I ++ +L +L +++L++N + + LF L
Sbjct: 235 QVFSQ-LFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHT--PCL 291
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L++N LE + TF +L L ++ LSYN + + F++L ++ + L N +
Sbjct: 292 VGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTA 351
Query: 378 IYPNAFVNLPNLVKLDLQDNKLK-------DFNLNVFSNITSKQTPMNLNLSNNYITN 428
++P F NL L L L N+L D N N+F N+ P + Y+ N
Sbjct: 352 LHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLF-NLALHGNPWQCDCHLAYLFN 408
Score = 183 (69.5 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 68/260 (26%), Positives = 119/260 (45%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
++E+ S+ L + D K + + S+ L+ T +F + N+ +V Q+
Sbjct: 30 VQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLE---TRAFGSNPNLTKVVFLNTQLC 86
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
P+AF LP L L++ + + + N+FSN+TS L L+ N + L E Q
Sbjct: 87 QFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLG---KLTLNFNMLEALPEG-LFQ 142
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
++SL L N++Q +P Q L+ L L N + L F L L+ L L
Sbjct: 143 HLAALESLHLQGNQLQALPRRLFQPLTH-LKTLNLAQNLLAQLPEELFHPLTSLQTLKLS 201
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+N ++ + + F + +LQ + L N IS L + F F L L + N + LP +F
Sbjct: 202 NNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIF 261
Query: 557 SNT-IIEKLDISYNQDKIRP 575
++ + L + +N ++ P
Sbjct: 262 ASLGNLTFLSLQWNMLRVLP 281
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 64/264 (24%), Positives = 120/264 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L LF+HL L+ L L N+LQ L +F L+ L ++ +L + P
Sbjct: 131 NMLEALPEGLFQHLAALESLHLQGNQLQA--LPRRLFQPLTHLKTLNLAQNLLA--QLPE 186
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L +L+ L + NN + + L SL + L+ N IS++ +F L
Sbjct: 187 ELFHP-LTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFC--L 243
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L N + + F +L L ++L +N+L+ + F + ++ + L+ NQ++
Sbjct: 244 ERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLET 303
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+ F +L NL L L N + +F ++ + + L L +N +T L+ Q
Sbjct: 304 VAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDL---EELVKLYLGSNNLTALHPA-LFQN 359
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQT 461
++ L LS N++ +P T
Sbjct: 360 LSKLELLSLSKNQLTTLPEGIFDT 383
Score = 168 (64.2 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 73/298 (24%), Positives = 134/298 (44%)
Query: 202 DLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILN 261
+L+ N+F +L +L +L+L+FN L+ L +F L+ L + + + P +
Sbjct: 111 NLSTNIFSNLTSLGKLTLNFNMLEA--LPEGLFQHLAALESLHLQGNQLQA--LPRRLFQ 166
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
L L+ L + N + + + LTSL + L N +S + +F + L+E+
Sbjct: 167 P-LTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFG-KLGS-LQELF 223
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L +N + + F L L + L N + + + F +L N+ + L +N ++ +
Sbjct: 224 LDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAG 283
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F + P LV L L N+L+ F+++++ ++ M LS N IT+L + +
Sbjct: 284 LFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLM---LSYNAITHLPAGIFRDLEELV 340
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
K L L +N + + Q + L L L N++ L F L L+L H N
Sbjct: 341 K-LYLGSNNLTALHPALFQNLS-KLELLSLSKNQLTTLPEGIFDTNYNLFNLAL-HGN 395
Score = 149 (57.5 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 86/333 (25%), Positives = 140/333 (42%)
Query: 21 NVTKLQHLGTTI--LKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKIT 78
N+TK+ L T + + D G+ +L +LE+TG + + F N+ + LTL
Sbjct: 74 NLTKVVFLNTQLCQFRPDAFGGL--PRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFN 131
Query: 79 NTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQ--HLGTTILKD--R 134
+E LP GLF + +E +L L N+L L L+ +T L+ +L +L
Sbjct: 132 --MLEALPEGLFQHLAALE--SLHLQGNQLQALPRR-LFQPLTHLKTLNLAQNLLAQLPE 186
Query: 135 EKXXXXXXXXXXRC--NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXX 192
E + N ++ L +F L S+ + ++NN +
Sbjct: 187 ELFHPLTSLQTLKLSNNALSGLPQGVFGKLG-SLQELFLDSNNISELPPQVFSQLFCLER 245
Query: 193 XXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL-FN 251
+ N IT L ++F L NL LSL +N L+++ +F L + SL N
Sbjct: 246 LWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAG-----LFAHTPCL-VGLSLTHN 299
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
E +L+ L L + N I ++ +L L + L N ++ +H LF
Sbjct: 300 QLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ- 358
Query: 312 NIHKRLKEIRLSNNYLELIES---DTFYNLKEL 341
N+ K L+ + LS N L + DT YNL L
Sbjct: 359 NLSK-LELLSLSKNQLTTLPEGIFDTNYNLFNL 390
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 251 (93.4 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 87/358 (24%), Positives = 160/358 (44%)
Query: 218 SLSFNKLQIIELNSNVFDVFEKLQLLEISFSL----FNSNEFPYYILNKNLNTLEWLAMD 273
SL FN L+ I + ++ F + ++ N NE + NL+TL + ++
Sbjct: 75 SLPFNGLRTIAILNSTLQSFSPTAWRHVEATIEHITINGNELKTVPVFGNLSTLMSMNLN 134
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
+N I +I + + L++L + LE N I + L + +S N L+ I +
Sbjct: 135 SNQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLDA-VKASLVLLDVSGNCLDAIPAQ 193
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
N L + L N + I NL + + + N ++ I+P AF+N+P L L
Sbjct: 194 ILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLY 253
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE 453
LQDN + + N + + L++SNN + L K P +K + + N I +
Sbjct: 254 LQDNIISTLDGNRLQGFKNLEV---LDVSNNALYAL--PSLKDLP-NLKQVRVDGNLITK 307
Query: 454 VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
+ +L+ + + N I + +F +LD L +L + +N++A + + F GM N
Sbjct: 308 IETLAFSN-NPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGMKN 366
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQ 570
LQ + + N ++ L F L L++ HN++ + F + + LD+S N+
Sbjct: 367 LQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNK 424
Score = 227 (85.0 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 103/427 (24%), Positives = 191/427 (44%)
Query: 20 SNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITN 79
S + +L L T +K + L FN LR + I L+ P+A+ +++A + + I
Sbjct: 58 SQIDELHILNGTDVKIESLP--FNG-LRTIAILNSTLQSFSPTAWRHVEATIE-HITING 113
Query: 80 TQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL--YSNVTKLQHLGTTILKDREKX 137
+++ +P +F + + M+++L+ N++S + S +T+L+ I K
Sbjct: 114 NELKTVP--VFGNLSTL--MSMNLNSNQISSIPDKAFNGLSALTQLRLENNAICDFPPKS 169
Query: 138 XXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKN------NNNNEDQVSDREKXXX-XX 190
+ D++GN + I++ N +NN ++++ E
Sbjct: 170 LDAVKASLV----LLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFL 225
Query: 191 XXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
+ N + ++ F ++ LQ L L N + L+ N F+ L++L++S
Sbjct: 226 RELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIIST--LDGNRLQGFKNLEVLDVS---- 279
Query: 251 NSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH 310
N+ + L K+L L+ + +D N I I + N +L I+++ N I +I N F
Sbjct: 280 NNALYALPSL-KDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFE 338
Query: 311 FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
++ K L + + NN L IE F +K L +++ N L ++ +SF L ++ + L
Sbjct: 339 -SLDK-LVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDL 396
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF----SNITSKQTPMNLNLS-NNY 425
N+I I F L L LDL +NK+ F +VF SNI + + S N +
Sbjct: 397 GHNKIHDIEEGTFDKLSKLFWLDLSNNKISGFKTSVFKKKISNILLDGNQLICDESFNEF 456
Query: 426 ITNLYEN 432
+T L N
Sbjct: 457 LTYLIAN 463
Score = 186 (70.5 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 85/345 (24%), Positives = 150/345 (43%)
Query: 224 LQIIELNSN---VFDVFEKLQLLEISFSLFNSNEF---PYYILNKNLNTLEWLAMDNNNI 277
++ I +N N VF L L +S +L NSN+ P N L+ L L ++NN I
Sbjct: 106 IEHITINGNELKTVPVFGNLSTL-MSMNL-NSNQISSIPDKAFN-GLSALTQLRLENNAI 162
Query: 278 KNIRNYSLYNL-TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
+ SL + SL +++ N + I + N L + L +N + I +
Sbjct: 163 CDFPPKSLDAVKASLVLLDVSGNCLDAIPAQILR-NA-ANLMYLDLGSNNISEINNFELM 220
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
NL L + + N L+ I +F N+ + + L N I + N NL LD+ +
Sbjct: 221 NLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSN 280
Query: 397 NKLKDF-NLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
N L +L N+ KQ ++ NL T + N+ ++ + + NN I ++
Sbjct: 281 NALYALPSLKDLPNL--KQVRVDGNLITKIETLAFSNNPN-----LQLISVQNNNIVQIS 333
Query: 456 VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
N ++ D L L + N + ++ F + L+ LS+ +N + + +F + +L
Sbjct: 334 RNSFESL-DKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLT 392
Query: 516 IIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI 560
+DL N+I + F KL L++S+N++ VF I
Sbjct: 393 TLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKISGFKTSVFKKKI 437
>UNIPROTKB|F1MSM8 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:DAAA02033778 IPI:IPI00713179 RefSeq:XP_001249506.1
RefSeq:XP_002691956.1 UniGene:Bt.87936 Ensembl:ENSBTAT00000005757
GeneID:781119 KEGG:bta:781119 NextBio:20924630 Uniprot:F1MSM8
Length = 842
Score = 165 (63.1 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 40/131 (30%), Positives = 73/131 (55%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ NN + + LT+ I+L +N I+ I F N LK++ +++N LE+
Sbjct: 71 LSLLNNGLTVLHTNDFSGLTNAISIHLGFNNIADIETGAF--NGLGLLKQLHINHNSLEI 128
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++ DTF+ L+ L + N + I+ ++F LN + ++L+ N I+ + PN F +P L
Sbjct: 129 LKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-L 187
Query: 390 VKLDLQDNKLK 400
LDL+ N+L+
Sbjct: 188 THLDLRGNQLQ 198
Score = 161 (61.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 105/431 (24%), Positives = 180/431 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNN-EDQVSDREKXXXXXXXXXXRCNKITDLNGNL 207
N I D+ F L ++K N+N+ E D N IT + +
Sbjct: 100 NNIADIETGAFNGL--GLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSA 157
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
F L L+ L L+ N ++ L N+F F L L++ + + PY +++ +
Sbjct: 158 FSKLNRLKVLILNDNAIE--SLPPNIFR-FVPLTHLDLRGNQLQT--LPYVGFLEHIGRI 212
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI--SKIHNN--LFHFNIHKRLKEIRLS 323
L +++N K N L L L N+ + + N+ F +I RLK+ +
Sbjct: 213 LDLQLEDN--KWACNCDLLQL-KLWLENMPPQSVIGDVVCNSPPFFKGSILSRLKKESIC 269
Query: 324 NN---YLELIESDTFYNLKELNTITLSYNLLKSIKTTSF-KNLNNMLNIVLSFNQIKYIY 379
Y E + +L ++I+ S+ S KTTS K ++ +
Sbjct: 270 PTPPVYEEHEDPSGSLHLAVTSSISDSH---MSAKTTSLLKPPTKAPGLIPYITKPSTQL 326
Query: 380 PNAFVNLPNLVKLDLQDNKL---KDFNLNVFSNITSK-QTPMNLNLSNNYITNLYENDKK 435
P + +P K+ L ++ N+ S++ Q P L L+ N I L ++D
Sbjct: 327 PGLYCPIPCNCKVLSPSGLLIHCQERNIESLSDLKPPPQNPRKLILAGNIIHTLLKSDLV 386
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+ ++ L L NNRI+ + L+KLYL+ N + L F L LE L L
Sbjct: 387 EY-FTLEMLHLGNNRIEVLEEGSFMNLT-RLQKLYLNGNHLTKLSGGMFLGLHNLEYLYL 444
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
E+N + ++ TF MP L+++ L+ N + +L + L +N+ N+ LP
Sbjct: 445 EYNGVKEILPGTFNPMPKLKVLYLNNNLLQVLP-PHIFSGVPLTRINLKTNQFTHLP--- 500
Query: 556 FSNTIIEKLDI 566
SN I++ LD+
Sbjct: 501 VSN-ILDDLDL 510
Score = 158 (60.7 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 43/168 (25%), Positives = 81/168 (48%)
Query: 409 NITSKQTPMNLNLSNNYITNLYE-NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
N K M +N I L + + P + L L NN + + N +++
Sbjct: 38 NCEEKDGTMLINCEEKGIKKLSQISVPPSRPFH---LSLLNNGLTVLHTNDFSGLTNAI- 93
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
++L FN I ++ AF L +L+ L + HN++ ++ + TF G+ NL+ + N I+++
Sbjct: 94 SIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVI 153
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
F +L++L ++ N + SLP ++F + LD+ NQ + P
Sbjct: 154 EPSAFSKLNRLKVLILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLP 201
Score = 143 (55.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + L NN +E++E +F NL L + L+ N L + F L+N+ + L +N +K
Sbjct: 391 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVK 450
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKK 435
I P F +P L L L +N L+ ++FS + P+ +NL N T+L ++
Sbjct: 451 EILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGV-----PLTRINLKTNQFTHLPVSNIL 505
Query: 436 QAPIYIKSLDLSNN 449
+ +DL +N
Sbjct: 506 DDLDLLTQIDLEDN 519
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/157 (28%), Positives = 75/157 (47%)
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
P +L+L NN +T L+ ND I S+ L N I ++ L++L+++ N
Sbjct: 68 PFHLSLLNNGLTVLHTNDFSGLTNAI-SIHLGFNNIADIETGAFNGLG-LLKQLHINHNS 125
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
++ L F L+ LE L ++N I V+ F + L+++ L+ N I L F F
Sbjct: 126 LEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRF- 184
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572
L L++ N+L++LP F I LD+ +K
Sbjct: 185 VPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 221
Score = 137 (53.3 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 39/139 (28%), Positives = 73/139 (52%)
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+D K P + L L+ N I + + L + +L L+L N I+ L+ +F NL L+
Sbjct: 358 SDLKPPPQNPRKLILAGNIIHTLLKSDLVEYF-TLEMLHLGNNRIEVLEEGSFMNLTRLQ 416
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N++ + F+G+ NL+ + L +N + + F KL++L +++N L+ L
Sbjct: 417 KLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGTFNPMPKLKVLYLNNNLLQVL 476
Query: 552 PRDVFSNTIIEKLDISYNQ 570
P +FS + ++++ NQ
Sbjct: 477 PPHIFSGVPLTRINLKTNQ 495
Score = 131 (51.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 40/133 (30%), Positives = 67/133 (50%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
TLE L + NN I+ + S NLT L + L N ++K+ +F +H L+ + L N
Sbjct: 390 TLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMF-LGLHN-LEYLYLEYN 447
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFV 384
++ I TF + +L + L+ NLL+ + F + + I L NQ ++ N
Sbjct: 448 GVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILD 506
Query: 385 NLPNLVKLDLQDN 397
+L L ++DL+DN
Sbjct: 507 DLDLLTQIDLEDN 519
Score = 110 (43.8 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 38/138 (27%), Positives = 66/138 (47%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
+++L N ++ +H N F + + I L N + IE+ F L L + +++N L+
Sbjct: 70 HLSLLNNGLTVLHTNDFS-GLTNAIS-IHLGFNNIADIETGAFNGLGLLKQLHINHNSLE 127
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
+K +F L N+ + N I I P+AF L L L L DN ++ N+F +
Sbjct: 128 ILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFV-- 185
Query: 413 KQTPM-NLNLSNNYITNL 429
P+ +L+L N + L
Sbjct: 186 ---PLTHLDLRGNQLQTL 200
Score = 97 (39.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 38/160 (23%), Positives = 78/160 (48%)
Query: 318 KEIRLSNNYLE-LIESDT--FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
+++ L+ N + L++SD ++ L+ L+ L N ++ ++ SF NL + + L+ N
Sbjct: 368 RKLILAGNIIHTLLKSDLVEYFTLEMLH---LGNNRIEVLEEGSFMNLTRLQKLYLNGNH 424
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
+ + F+ L NL L L+ N +K+ F+ + + L L+NN + L +
Sbjct: 425 LTKLSGGMFLGLHNLEYLYLEYNGVKEILPGTFNPMPKLKV---LYLNNNLLQVLPPHIF 481
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
P+ ++L N+ +PV+ + D L ++ L+ N
Sbjct: 482 SGVPL--TRINLKTNQFTHLPVSNILDDLDLLTQIDLEDN 519
Score = 96 (38.9 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 37/134 (27%), Positives = 56/134 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N +T L+ N F L N + L FN + IE + N + ++L + S + + F
Sbjct: 76 NGLTVLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTF- 134
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L LE+L DNN I I + L L + L N I + N+F F
Sbjct: 135 -----HGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRF---VP 186
Query: 317 LKEIRLSNNYLELI 330
L + L N L+ +
Sbjct: 187 LTHLDLRGNQLQTL 200
Score = 65 (27.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 29/125 (23%), Positives = 55/125 (44%)
Query: 9 KLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNID 68
KLS +++ L + G T+L + G+ N+ + + ++ I+ AF+ +
Sbjct: 57 KLSQISVPPSRPFHLSLLNNGLTVLHTNDFSGLTNAI--SIHLGFNNIADIETGAFNGLG 114
Query: 69 ACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT 128
L I + +E L F +EN+E + D +N ++V+ + +KL L
Sbjct: 115 LLKQL--HINHNSLEILKEDTFHGLENLEFLQAD--NNFITVIEPSAF----SKLNRLKV 166
Query: 129 TILKD 133
IL D
Sbjct: 167 LILND 171
Score = 54 (24.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 3 LDLSHNKLSVLNMATLYS--NVTKLQHLGT--TILKGDQLQGIFNSKLRELEITGKDLKF 58
L ++HN L +L T + N+ LQ T+++ + ++L+ L + ++
Sbjct: 119 LHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKL--NRLKVLILNDNAIES 176
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPS-GLFDKIENIEQMTLDLSHNK 107
+ P+ F + + L + Q++ LP G + I I + L L NK
Sbjct: 177 LPPNIFRFVPLTH---LDLRGNQLQTLPYVGFLEHIGRI--LDLQLEDNK 221
>TAIR|locus:2827587 [details] [associations]
symbol:PIRL5 "AT2G17440" species:3702 "Arabidopsis
thaliana" [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AY849575
EMBL:AK228738 IPI:IPI00548995 PIR:C84552 RefSeq:NP_179336.1
UniGene:At.40141 ProteinModelPortal:Q5G5E0 SMR:Q5G5E0 STRING:Q5G5E0
PaxDb:Q5G5E0 PRIDE:Q5G5E0 EnsemblPlants:AT2G17440.1 GeneID:816250
KEGG:ath:AT2G17440 TAIR:At2g17440 HOGENOM:HOG000242894 OMA:LSENCIM
PhylomeDB:Q5G5E0 ProtClustDB:CLSN2683891 Genevestigator:Q5G5E0
Uniprot:Q5G5E0
Length = 526
Score = 246 (91.7 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 84/281 (29%), Positives = 145/281 (51%)
Query: 300 KISKIH-NNLFHFNIHKRLKEIRLSNNYLELIE--SDTFYNLKELNTITLSYNLLKSIKT 356
K+S I +L + K +E+ L + ++ +E D+ L L + LS N + +
Sbjct: 188 KLSLIKLASLIEVSAKKATQELNLQHRLMDQLEWLPDSLGKLSSLVRLDLSENCIMVLPA 247
Query: 357 TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTP 416
T L ++ + L N+I + P + +L NLV L+L N+L + F+ + +
Sbjct: 248 T-IGGLISLTRLDLHSNRIGQL-PESIGDLLNLVNLNLSGNQLSSLPSS-FNRLIHLE-- 302
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
L+LS+N ++ L E+ + +K LD+ N I+E+P + + S+ +L D+N +
Sbjct: 303 -ELDLSSNSLSILPESIGSL--VSLKKLDVETNNIEEIPHSI--SGCSSMEELRADYNRL 357
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
K L A G L LE+L++ +NNI + T M NL+ +D+SFNE+ + E ++
Sbjct: 358 KALPE-AVGKLSTLEILTVRYNNIRQL-PTTMSSMANLKELDVSFNELESVP-ESLCYAK 414
Query: 537 KLRILNISHN--RLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
L LNI +N LRSLP + + +E+LD+S NQ + P
Sbjct: 415 TLVKLNIGNNFANLRSLPGLIGNLEKLEELDMSNNQIRFLP 455
Score = 168 (64.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 68/258 (26%), Positives = 127/258 (49%)
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIK--TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
LIE +ELN L + L+ ++ S L++++ + LS N I + P L
Sbjct: 197 LIEVSAKKATQELN---LQHRLMDQLEWLPDSLGKLSSLVRLDLSENCIM-VLPATIGGL 252
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
+L +LDL N++ +I +NLNLS N +++L + + I+++ LDL
Sbjct: 253 ISLTRLDLHSNRIGQLP----ESIGDLLNLVNLNLSGNQLSSLPSSFNRL--IHLEELDL 306
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
S+N + +P + SL+KL ++ N I+ + + G +E L ++N + + +
Sbjct: 307 SSNSLSILPESIGSLV--SLKKLDVETNNIEEIPHSISG-CSSMEELRADYNRLKALPEA 363
Query: 507 TFIG-MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV-FSNTIIEKL 564
+G + L+I+ + +N I L + L+ L++S N L S+P + ++ T++ KL
Sbjct: 364 --VGKLSTLEILTVRYNNIRQLPTTMSSMA-NLKELDVSFNELESVPESLCYAKTLV-KL 419
Query: 565 DISYNQDKIR--PGRESN 580
+I N +R PG N
Sbjct: 420 NIGNNFANLRSLPGLIGN 437
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 77/275 (28%), Positives = 133/275 (48%)
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES-DTFYNLKELN 342
SL L+SL ++L N I + + RL ++ SN +L ES NL LN
Sbjct: 225 SLGKLSSLVRLDLSENCIMVLPATIGGLISLTRL-DLH-SNRIGQLPESIGDLLNLVNLN 282
Query: 343 TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF 402
LS N L S+ + SF L ++ + LS N + I P + +L +L KLD++ N +++
Sbjct: 283 ---LSGNQLSSLPS-SFNRLIHLEELDLSSNSLS-ILPESIGSLVSLKKLDVETNNIEEI 337
Query: 403 NLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTF 462
++ S +S + L N + L E K + + I L + N I+++P + +
Sbjct: 338 PHSI-SGCSSME---ELRADYNRLKALPEAVGKLSTLEI--LTVRYNNIRQLPTT-MSSM 390
Query: 463 ADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIG-MPNLQIIDLS 520
A+ L++L + FNE++ + ++ + L L++ +N + IG + L+ +D+S
Sbjct: 391 AN-LKELDVSFNELESVPESLCYAK--TLVKLNIGNNFANLRSLPGLIGNLEKLEELDMS 447
Query: 521 FNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
N+I L F LR+L N L LPRD+
Sbjct: 448 NNQIRFLP-YSFKTLSNLRVLQTEQNPLEELPRDI 481
Score = 147 (56.8 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 56/206 (27%), Positives = 101/206 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+++ L + F L +L+EL LS N L I L ++ + L+ L++ + N E P+
Sbjct: 286 NQLSSLPSS-FNRLIHLEELDLSSNSLSI--LPESIGSLVS-LKKLDVETN--NIEEIPH 339
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
I +++E L D N +K + ++ L++L + + YN I ++ + L
Sbjct: 340 SI--SGCSSMEELRADYNRLKALPE-AVGKLSTLEILTVRYNNIRQLPTTMSSM---ANL 393
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNL--LKSIKTTSFKNLNNMLNIVLSFNQI 375
KE+ +S N LE + Y K L + + N L+S+ NL + + +S NQI
Sbjct: 394 KELDVSFNELESVPESLCY-AKTLVKLNIGNNFANLRSLPGL-IGNLEKLEELDMSNNQI 451
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKD 401
+++ P +F L NL L + N L++
Sbjct: 452 RFL-PYSFKTLSNLRVLQTEQNPLEE 476
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 60/225 (26%), Positives = 112/225 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I L ++ L NL L+LS N+L + + N E+L L S S+ P
Sbjct: 263 NRIGQLPESI-GDLLNLVNLNLSGNQLSSLPSSFNRLIHLEELDLSSNSLSIL-----PE 316
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
I +L +L+ L ++ NNI+ I +S+ +S+ + +YN++ + + + + L
Sbjct: 317 SI--GSLVSLKKLDVETNNIEEIP-HSISGCSSMEELRADYNRLKALPEAVGKLSTLEIL 373
Query: 318 KEIRLSNNYLELIES-DTFYNLKELNTITLSYNLLKSI-KTTSFKNLNNMLNIVLSFNQI 375
+R NN +L + + NLKEL+ +S+N L+S+ ++ + LNI +F +
Sbjct: 374 T-VRY-NNIRQLPTTMSSMANLKELD---VSFNELESVPESLCYAKTLVKLNIGNNFANL 428
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLK--DFNLNVFSNITSKQTPMN 418
+ + P NL L +LD+ +N+++ ++ SN+ QT N
Sbjct: 429 RSL-PGLIGNLEKLEELDMSNNQIRFLPYSFKTLSNLRVLQTEQN 472
>WB|WBGene00008093 [details] [associations]
symbol:lron-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00700000104056 eggNOG:KOG0619
EMBL:Z79598 RefSeq:NP_510424.4 ProteinModelPortal:Q93377 SMR:Q93377
EnsemblMetazoa:C44H4.1 GeneID:181553 KEGG:cel:CELE_C44H4.1
UCSC:C44H4.1 CTD:181553 WormBase:C44H4.1 HOGENOM:HOG000018355
InParanoid:Q93377 OMA:TDSKLPH NextBio:914416 Uniprot:Q93377
Length = 607
Score = 247 (92.0 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 105/370 (28%), Positives = 175/370 (47%)
Query: 218 SLSFNKLQIIELNSNVFDVFE--KLQLLEISFSLFNSNEFPYYILNKNL-NTLEWLAMDN 274
SL+ + I ++ F F+ KL L F+ N F NL N+LE L +
Sbjct: 63 SLTISNTPIEKMPGYAFQGFQIKKLFLRNNGLRSFHPNTF-----TGNLENSLEELEIRG 117
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR--LKEIRLSNNYLELIES 332
N I I + L L ++L N I + +N F + H R L ++ LS N L I
Sbjct: 118 NYIDGIPQSGVSILKQLKILSLPDNLIEYVQDNAF-LSYHSRDSLLKLDLSANNLTAIHP 176
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
L+ L+ ++L NLL I + + +N+ ++ ++ L N+I I N+ + LPNL L
Sbjct: 177 TGLLGLENLSQLSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHTISRNS-LPLPNLKSL 235
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPM--NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
L+ N+++ + FS +TP+ L L NN +T++ + +K L +SNN+
Sbjct: 236 SLEVNQIRLIPSDSFS-----ETPLLSYLYLGNNLLTSIDASMFLHIG-GLKVLSMSNNK 289
Query: 451 -IQEVPVN---FLQTF-----------ADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
I + N +Q F A SL +L L I ++ + + ++++ L
Sbjct: 290 DITSIQANGKLSVQQFKLCICILAFQHAPSLIRLELFDCSISRIEPKSLQKVQHIQVILL 349
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF--KLRILNISHNRLRSLPR 553
N I + TF +P L +DLS N I+ + + F FS L L++S NRL SLP
Sbjct: 350 SRNQITRISHDTFSNLPELSELDLSGNSINAV--DDFAFSQLPMLTSLDLSSNRLESLPS 407
Query: 554 DVFSNTIIEK 563
+V +++++K
Sbjct: 408 NVIYDSLMQK 417
Score = 149 (57.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 60/241 (24%), Positives = 103/241 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++++ ++ +L++LSL N++ I NS + L L L S+ F
Sbjct: 193 NLLSEIPSQALENIPSLEDLSLGVNRIHTISRNSLPLPNLKSLSLEVNQIRLIPSDSFSE 252
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK-ISKIHNN--------- 307
L L +L + NN + +I ++ L +++ NK I+ I N
Sbjct: 253 TPL------LSYLYLGNNLLTSIDASMFLHIGGLKVLSMSNNKDITSIQANGKLSVQQFK 306
Query: 308 ----LFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
+ F L + L + + IE + ++ + I LS N + I +F NL
Sbjct: 307 LCICILAFQHAPSLIRLELFDCSISRIEPKSLQKVQHIQVILLSRNQITRISHDTFSNLP 366
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV-FSNITSKQT-PMNLNL 421
+ + LS N I + AF LP L LDL N+L+ NV + ++ K+T P+ L
Sbjct: 367 ELSELDLSGNSINAVDDFAFSQLPMLTSLDLSSNRLESLPSNVIYDSLMQKKTSPVQRKL 426
Query: 422 S 422
S
Sbjct: 427 S 427
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 192 (72.6 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
Identities = 81/299 (27%), Positives = 132/299 (44%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L +++N+I + ++ L +L INL N+I ++ F + ++E+ L+ N LE
Sbjct: 537 LRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAF--DGAAGVQELMLTGNQLE 594
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F L L T+ L NL+ + +F L+++ + L N+I I P AF L +
Sbjct: 595 TMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L ++L N FN N + L I + N + Q P ++K + + +
Sbjct: 655 LSTINLLSNP---FNCNCHMAWLGRW------LRKRRIVS--GNPRCQKPFFLKEIPIQD 703
Query: 449 NRIQEVPVNFLQTFADSLRKLYLD----FNEI-----KHLDATAFGN-LDVLELLSLEHN 498
IQ+ + + + L + + + L A G DV EL LE N
Sbjct: 704 VAIQDFTCDGNEESSCQLSPRCPEQCTCVETVVRCSNRGLHALPKGMPKDVTELY-LEGN 762
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
++ V K L +IDLS N ISMLT F L L +S+NRLR +P F+
Sbjct: 763 HLTAVPKE-LSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFN 820
Score = 161 (61.7 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 77/299 (25%), Positives = 135/299 (45%)
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
E L +D NNI I L +L ++LE N++S I F ++ K+L+ +RL+ N L
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQ-DL-KQLERLRLNKNKL 121
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+++ F + +L + LS N ++ I +F+ + + N+ L N I I AF L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALR 181
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI--YIKSL- 444
+L L L +N + + F+++ +T L L +N+ LY D A + +++
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRT---LRLHSNH---LY-CDCHLAWLSDWLRQRR 234
Query: 445 DLSNNRIQEVPVNFLQTF--ADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+ + PV+ L+ F AD +K Y+ A +L S NNI
Sbjct: 235 TIGQFTLCMAPVH-LRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCS-NNIVD 292
Query: 503 VVKRTFIGMP-NLQ--IIDLSF--NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ +P NL I+++ N I + F KL+ ++IS N++ + D F
Sbjct: 293 CRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAF 351
Score = 156 (60.0 bits), Expect = 9.4e-18, Sum P(3) = 9.4e-18
Identities = 50/156 (32%), Positives = 76/156 (48%)
Query: 274 NNNIKNIRNYSLYNLTS-----LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + + + I LE N I I F +K+LK I +S N +
Sbjct: 287 SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF--TQYKKLKRIDISKNQIS 344
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I D F LK L ++ L N + I F L ++ ++L+ N+I + N F +L N
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L L L DNKL+ + +F + S QT L+L+ N
Sbjct: 405 LNLLSLYDNKLQTISKGLFVPLQSIQT---LHLAQN 437
Score = 138 (53.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 42/164 (25%), Positives = 78/164 (47%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I + + + L N + I F LK L + L N + I+ +F++L + + L+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNK 118
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N+++ + F + P L +LDL +N+++ F +T + NL L NN+I+ + E+
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVK---NLQLDNNHISCI-ED 174
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+A ++ L L+NN I + V +R L L N +
Sbjct: 175 GAFRALRDLEILTLNNNNISRILVTSFNHMP-KIRTLRLHSNHL 217
Score = 133 (51.9 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 385 NLPN-LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
NLP +V++ L+ N +K F T + +++S N I+++ D Q + S
Sbjct: 304 NLPEGIVEIRLEQNSIKSIPAGAF---TQYKKLKRIDISKNQISDIAP-DAFQGLKSLTS 359
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N+I E+P SL+ L L+ N+I L F +L L LLSL N + +
Sbjct: 360 LVLYGNKITEIPKGLFDGLV-SLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTI 418
Query: 504 VKRTFIGMPNLQIIDLSFN 522
K F+ + ++Q + L+ N
Sbjct: 419 SKGLFVPLQSIQTLHLAQN 437
Score = 128 (50.1 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
LE N ++ + L F ++L I LSNN + ++ + TF N+ L+T+ LSYN L+ I
Sbjct: 759 LEGNHLTAVPKELSAF---RQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP 815
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
+F L ++ + L N I + +F +L +L L L N L
Sbjct: 816 VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 124 (48.7 bits), Expect = 0.00086, P = 0.00086
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
E L L+ NNI + K F G+ NL+++ L N++S++ F +L L ++ N+L+
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQV 123
Query: 551 LPRDVFSNTI-IEKLDISYNQ 570
LP +F +T + +LD+S NQ
Sbjct: 124 LPELLFQSTPKLTRLDLSENQ 144
Score = 122 (48.0 bits), Expect = 9.4e-18, Sum P(3) = 9.4e-18
Identities = 38/130 (29%), Positives = 67/130 (51%)
Query: 418 NLNLSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+L L++N I+ L K+ P ++ ++LSNNRI+EV A +++L L N++
Sbjct: 536 DLRLNDNDISVLEATGIFKKLP-NLRKINLSNNRIKEVREGAFDGAA-GVQELMLTGNQL 593
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
+ + F L L+ L L N I+ V TF G+ +++++ L N I+ +T F
Sbjct: 594 ETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLV 653
Query: 537 KLRILNISHN 546
L +N+ N
Sbjct: 654 SLSTINLLSN 663
Score = 119 (46.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 40/152 (26%), Positives = 69/152 (45%)
Query: 409 NITSKQTPMNLNLSNNYIT----NLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD 464
N S P + SNN + L E P I + L N I+ +P +
Sbjct: 274 NANSLSCPSACSCSNNIVDCRGKGLTEIPAN-LPEGIVEIRLEQNSIKSIPAGAFTQYK- 331
Query: 465 SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
L+++ + N+I + AF L L L L N I + K F G+ +LQ++ L+ N+I
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 391
Query: 525 SMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ L F L +L++ N+L+++ + +F
Sbjct: 392 NCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Score = 112 (44.5 bits), Expect = 9.9e-17, Sum P(3) = 9.9e-17
Identities = 35/124 (28%), Positives = 61/124 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y L L++N I + + +LRK+ L N IK + AF G V EL+ L
Sbjct: 531 PEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELM-LT 589
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + + R F G+ +L+ + L N IS ++ + F +R+L++ NR+ ++ F
Sbjct: 590 GNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 649
Query: 557 SNTI 560
+ +
Sbjct: 650 TTLV 653
Score = 112 (44.5 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 33/136 (24%), Positives = 61/136 (44%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L L +++N + I + +L L + L NK+ + LF +L + LS
Sbjct: 84 LKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQST--PKLTRLDLS 141
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N ++ I F + + + L N + I+ +F+ L ++ + L+ N I I +F
Sbjct: 142 ENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSF 201
Query: 384 VNLPNLVKLDLQDNKL 399
++P + L L N L
Sbjct: 202 NHMPKIRTLRLHSNHL 217
Score = 108 (43.1 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 26/98 (26%), Positives = 52/98 (53%)
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K + E+ L N+L + + ++L I LS N + + +F N++++ ++LS+N+
Sbjct: 752 KDVTELYLEGNHLTAVPKE-LSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 810
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ I +AF L +L L L N + F+++TS
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTS 848
Score = 107 (42.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+++ + F+ L L+ L L+ NKLQ++ EL +F KL L++S + P
Sbjct: 95 NQVSIIERGAFQDLKQLERLRLNKNKLQVLPEL---LFQSTPKLTRLDLSENQIQG--IP 149
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ + ++ L +DNN+I I + + L L + L N IS+I + FN +
Sbjct: 150 RKAF-RGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL--VTSFNHMPK 206
Query: 317 LKEIRLSNNYL 327
++ +RL +N+L
Sbjct: 207 IRTLRLHSNHL 217
Score = 105 (42.0 bits), Expect = 2.5e-13, Sum P(4) = 2.5e-13
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K L L + + NN IK +R + + + L N++ +H +F + LK +
Sbjct: 554 KKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFR-GLSS-LKTLM 611
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L +N + + +DTF L + ++L N + +I +F L ++ I L N
Sbjct: 612 LRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 101 (40.6 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 468 KLYLDFNEIKHL--DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
+LYL+ N + + + +AF L L+ L +N+I+++ TF M +L + LS+N +
Sbjct: 756 ELYLEGNHLTAVPKELSAFRQLT---LIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
+ F LR+L + N + S+P F++ T + L + N
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
Score = 90 (36.7 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KL+ ++I+ + I P AF + + L L +I E+P GLFD + ++ Q+ L L+
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLY--GNKITEIPKGLFDGLVSL-QLLL-LN 387
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
NK++ L + T LQ+L L D +
Sbjct: 388 ANKINCLRVNTFQD----LQNLNLLSLYDNK 414
Score = 87 (35.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 29/132 (21%), Positives = 64/132 (48%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+D + E+P N + + ++ L+ N IK + A AF L+ + + N I+ +
Sbjct: 291 VDCRGKGLTEIPANL----PEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDI 346
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
F G+ +L + L N+I+ + F L++L ++ N++ L + F + ++
Sbjct: 347 APDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQD--LQN 404
Query: 564 LDI-SYNQDKIR 574
L++ S +K++
Sbjct: 405 LNLLSLYDNKLQ 416
Score = 85 (35.0 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L L N++T + + + A + +DLSNN I + N + L L L +N ++
Sbjct: 757 LYLEGNHLTAVPK--ELSAFRQLTLIDLSNNSISML-TNHTFSNMSHLSTLILSYNRLRC 813
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
+ AF L L +L+L N+I+ V + +F + +L + L N +
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 84 (34.6 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 30/113 (26%), Positives = 60/113 (53%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N I+ L +F+ L NL++++LS N+++ E+ FD +Q L ++ N E
Sbjct: 542 NDISVLEATGIFKKLPNLRKINLSNNRIK--EVREGAFDGAAGVQELMLTG---NQLETM 596
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + + L++L+ L + +N I + N + L+S+ ++L N+I+ I F
Sbjct: 597 HGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 649
Score = 83 (34.3 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L + + NN+I + N++ N++ L+ + L YN++ I + FN + L+ + L N
Sbjct: 777 LTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP--VHAFNGLRSLRVLTLHGND 834
Query: 327 LELIESDTFYNLKELNTITLSYNLL 351
+ + +F +L L+ + L N L
Sbjct: 835 ISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 79 (32.9 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN--EF 255
N I + F L+ + +S N QI ++ D F+ L+ L S L+ + E
Sbjct: 317 NSIKSIPAGAFTQYKKLKRIDISKN--QISDIAP---DAFQGLKSLT-SLVLYGNKITEI 370
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
P + + L +L+ L ++ N I +R + +L +LN ++L NK+ I LF
Sbjct: 371 PKGLFD-GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Score = 77 (32.2 bits), Expect = 9.4e-18, Sum P(3) = 9.4e-18
Identities = 30/127 (23%), Positives = 64/127 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL-QGIFNS--KLRELEITGKDLKFI 59
L L N++S++ + ++ +L+ L K L + +F S KL L+++ ++ I
Sbjct: 90 LHLEDNQVSIIERGA-FQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGI 148
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
AF + +L L N I + G F + ++E +TL+ +N +S + + T +++
Sbjct: 149 PRKAFRGVTGVKNLQLD--NNHISCIEDGAFRALRDLEILTLN--NNNISRI-LVTSFNH 203
Query: 120 VTKLQHL 126
+ K++ L
Sbjct: 204 MPKIRTL 210
Score = 75 (31.5 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
Identities = 29/102 (28%), Positives = 44/102 (43%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N+I+D+ + F+ L KS+ N + NKI L N F
Sbjct: 341 NQISDIAPDAFQGL-KSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTF 399
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
+ L NL LSL NKLQ I + +F + +Q L ++ + F
Sbjct: 400 QDLQNLNLLSLYDNKLQTI--SKGLFVPLQSIQTLHLAQNPF 439
Score = 56 (24.8 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS--NVTKLQHLG---TT 129
+++ I+ +P+G F + + +++ +D+S N++S + ++T L G T
Sbjct: 312 IRLEQNSIKSIPAGAFTQYKKLKR--IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 130 ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
I K NKI L N F+ LQ
Sbjct: 370 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 403
Score = 55 (24.4 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 24/108 (22%), Positives = 49/108 (45%)
Query: 3 LDLSHN---KLSVLNMATLYS-NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
LDL N +++ ++ A L + V L+ +I++ Q + +L L + L+
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDL--KQLERLRLNKNKLQV 123
Query: 59 IDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
+ F + LT L ++ QI+ +P F + ++ + LD +H
Sbjct: 124 LPELLFQSTPK---LTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNH 168
Score = 51 (23.0 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 23/110 (20%), Positives = 56/110 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+D+S N++S + L+ L + +L G+++ +G+F+ L+ L + +
Sbjct: 336 IDISKNQISDIAPDAFQG----LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 391
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
+ + F ++ +L L + + +++ + GLF +++I+ TL L+ N
Sbjct: 392 NCLRVNTFQDLQNL-NL-LSLYDNKLQTISKGLFVPLQSIQ--TLHLAQN 437
Score = 50 (22.7 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 24/119 (20%), Positives = 49/119 (41%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNI 67
N LS + + +N+ + G T + + +GI +L + +K I AF
Sbjct: 276 NSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQ-----NSIKSIPAGAFTQY 330
Query: 68 DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ I+ QI ++ F ++++ + L NK++ + L+ + LQ L
Sbjct: 331 KKLK--RIDISKNQISDIAPDAFQGLKSLTSLVL--YGNKITEIPKG-LFDGLVSLQLL 384
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
R N I+ ++ + F L +++ LSL N++ I F L + + + FN N
Sbjct: 613 RSNLISCVSNDTFAGLSSVRLLSLYDNRITTI--TPGAFTTLVSLSTINLLSNPFNCN 668
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 249 (92.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 95/355 (26%), Positives = 164/355 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T + F L++L+ L L N+L+ ++ + LQ L + + + N P
Sbjct: 26 NGLTYIPKGAFAGLFSLKVLMLQNNQLR--QVPTEALQNLRSLQSLRLDAN--HINYVPP 81
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
N L +L L +D+N++ I + +L +L + L NKI I + F N+ L
Sbjct: 82 NCFN-GLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFG-NLSS-L 138
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN + + F L L T+ L+YN L T + + L N+ + N IK
Sbjct: 139 VVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPT-AIRTLTNLKELGFHSNNIKS 197
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AFV P+L+ + DN ++ + F N+ +T + LN ++ IT E
Sbjct: 198 IPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRT-LTLNGASQ-IT---EFPDLTG 252
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++SL L+ +I +P + + L+ L L +N ++ D F L+ + L H
Sbjct: 253 TTSLESLTLTGAQITSLPRSACDQLPN-LQVLDLSYNLLE--DLPCFTACKKLQKIDLHH 309
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
N I + TF + +L+ +DL++N+I ++ F L L++S N L S P
Sbjct: 310 NEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLSSFP 364
Score = 243 (90.6 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 79/271 (29%), Positives = 129/271 (47%)
Query: 299 NKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS 358
N I+K+ +N H N+ + L+E+RL+ N L I F L L + L N L+ + T +
Sbjct: 2 NNITKLPSNPVH-NL-RFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEA 59
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
+NL ++ ++ L N I Y+ PN F L +L L L DN L + + F ++ + Q M
Sbjct: 60 LQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQA-MT 118
Query: 419 LNLSN-NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
L L+ +YI + + + L L NNRI + SL L L++N +
Sbjct: 119 LALNKIHYIPDYAFGNLSSLVV----LHLHNNRIYSLGKKCFDGL-HSLETLDLNYNSLD 173
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
TA L L+ L NNI + +R F+G P+L I N I ++ F +
Sbjct: 174 EFP-TAIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPE 232
Query: 538 LRILNISH-NRLRSLPRDVFSNTIIEKLDIS 567
LR L ++ +++ P D+ T +E L ++
Sbjct: 233 LRTLTLNGASQITEFP-DLTGTTSLESLTLT 262
Score = 204 (76.9 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 96/398 (24%), Positives = 170/398 (42%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L EL + G L +I AF + + L L+ N Q+ ++P+ + +++ + LD +H
Sbjct: 18 LEELRLAGNGLTYIPKGAFAGLFSLKVLMLQ--NNQLRQVPTEALQNLRSLQSLRLDANH 75
Query: 106 NKLSVLNMATLYSNVTKLQHLG------TTILKDREKXXXXXXXXXXRCNKITDLNGNLF 159
N ++ + L+HL T I + NKI + F
Sbjct: 76 INYVPPNC---FNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAF 132
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSL 219
+L S+V +NN N + + R L NL+EL
Sbjct: 133 GNLS-SLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFP-TAIRTLTNLKELGF 190
Query: 220 SFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNL--NTLEWLAMDNNNI 277
N ++ I + V + L+ I F +++ P ++ K+ N E + N
Sbjct: 191 HSNNIKSIPERAFVGNP----SLITIHF--YDN---PIQLVGKSAFQNLPELRTLTLNGA 241
Query: 278 KNIRNY-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
I + L TSL + L +I+ + + + L+ + LS N LE + F
Sbjct: 242 SQITEFPDLTGTTSLESLTLTGAQITSLPRSAC--DQLPNLQVLDLSYNLLE--DLPCFT 297
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
K+L I L +N + IK +F+ L ++ ++ L++N+IK I+PNAF +LP+L+KLD+
Sbjct: 298 ACKKLQKIDLHHNEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSS 357
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNY-ITNLYEND 433
N L F + +T +L L+ N+ + +L +D
Sbjct: 358 NLLSSFPVTGLHGLT------HLKLTGNHALQSLISSD 389
Score = 183 (69.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 86/338 (25%), Positives = 154/338 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N++ + ++L +LQ L L N + + N F+ L+ L + + + E P
Sbjct: 50 NQLRQVPTEALQNLRSLQSLRLDANHINYVP--PNCFNGLVSLRHLWLDDN--SLTEIPI 105
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++L L+ + + N I I +Y+ NL+SL ++L N+I + F +H L
Sbjct: 106 QAF-RSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFD-GLHS-L 162
Query: 318 KEIRLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ + L+ N L+ + T NLKEL N +KSI +F +++ I N I
Sbjct: 163 ETLDLNYNSLDEFPTAIRTLTNLKELG---FHSNNIKSIPERAFVGNPSLITIHFYDNPI 219
Query: 376 KYIYPNAFVNLPNLVKLDLQD-NKLKDF----------NLNVF-SNITSKQTPMNLNLSN 423
+ + +AF NLP L L L +++ +F +L + + ITS L N
Sbjct: 220 QLVGKSAFQNLPELRTLTLNGASQITEFPDLTGTTSLESLTLTGAQITSLPRSACDQLPN 279
Query: 424 NYITNLYENDKKQAPIY-----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
+ +L N + P + ++ +DL +N I E+ + + A SLR L L +N+IK
Sbjct: 280 LQVLDLSYNLLEDLPCFTACKKLQKIDLHHNEIDEIKADTFRQLA-SLRSLDLAWNKIKI 338
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
+ AF +L L L + N ++ G+ +L++
Sbjct: 339 IHPNAFSSLPSLIKLDVSSNLLSSFPVTGLHGLTHLKL 376
Score = 149 (57.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 59/211 (27%), Positives = 91/211 (43%)
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N I + N NL L +L L N L F+ + S + M L NN + +
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLM---LQNNQLRQV-PT 57
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
+ Q ++SL L N I VP N SLR L+LD N + + AF +L L+
Sbjct: 58 EALQNLRSLQSLRLDANHINYVPPNCFNGLV-SLRHLWLDDNSLTEIPIQAFRSLPALQA 116
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
++L N I + F + +L ++ L N I L + F L L++++N L P
Sbjct: 117 MTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFP 176
Query: 553 RDVFSNTIIEKLDISYNQDKIRPGRE--SNP 581
+ + T +++L N K P R NP
Sbjct: 177 TAIRTLTNLKELGFHSNNIKSIPERAFVGNP 207
>UNIPROTKB|F1RP63 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:CU466998 RefSeq:XP_003482968.1
Ensembl:ENSSSCT00000010401 GeneID:100153917 KEGG:ssc:100153917
Uniprot:F1RP63
Length = 842
Score = 164 (62.8 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 40/131 (30%), Positives = 73/131 (55%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ NN + + LT+ I+L +N I+ I F N LK++ +++N LE+
Sbjct: 71 LSLLNNGLTMLHANDFSGLTNAISIHLGFNNIADIETGAF--NGLGLLKKLHINHNSLEI 128
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++ DTF+ L+ L + N + I+ ++F LN + ++L+ N I+ + PN F +P L
Sbjct: 129 LKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNVFRFVP-L 187
Query: 390 VKLDLQDNKLK 400
LDL+ N+L+
Sbjct: 188 THLDLRGNQLQ 198
Score = 160 (61.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 43/156 (27%), Positives = 80/156 (51%)
Query: 426 ITNLYEND-KKQAPIYIKS-----LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
+ N E D KK + I + + L L NN + + N +++ ++L FN I +
Sbjct: 47 LINCEEKDIKKLSQISVPASRPFHLSLLNNGLTMLHANDFSGLTNAI-SIHLGFNNIADI 105
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
+ AF L +L+ L + HN++ ++ + TF G+ NL+ + N I+++ F +L+
Sbjct: 106 ETGAFNGLGLLKKLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLK 165
Query: 540 ILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
+L ++ N + SLP +VF + LD+ NQ + P
Sbjct: 166 VLILNDNAIESLPPNVFRFVPLTHLDLRGNQLQTLP 201
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 46/157 (29%), Positives = 75/157 (47%)
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
P +L+L NN +T L+ ND I S+ L N I ++ L+KL+++ N
Sbjct: 68 PFHLSLLNNGLTMLHANDFSGLTNAI-SIHLGFNNIADIETGAFNGLG-LLKKLHINHNS 125
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
++ L F L+ LE L ++N I V+ F + L+++ L+ N I L F F
Sbjct: 126 LEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNVFRF- 184
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572
L L++ N+L++LP F I LD+ +K
Sbjct: 185 VPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 221
Score = 143 (55.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + L NN +E++E +F NL L + L+ N L + F L+N+ + L +N +K
Sbjct: 391 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVK 450
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKK 435
I P F +P L L L +N L+ ++FS + P+ +NL N T+L ++
Sbjct: 451 EILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGV-----PLTRINLKTNQFTHLPVSNIL 505
Query: 436 QAPIYIKSLDLSNN 449
+ +DL +N
Sbjct: 506 DDLDLLTQIDLEDN 519
Score = 136 (52.9 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 39/139 (28%), Positives = 72/139 (51%)
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+D K P + L L+ N I + L + +L L+L N I+ L+ +F NL L+
Sbjct: 358 SDLKPPPQNPRKLILAGNIIHTLMKYDLAEYF-TLEMLHLGNNRIEVLEEGSFMNLTRLQ 416
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N++ + F+G+ NL+ + L +N + + F KL++L +++N L+ L
Sbjct: 417 KLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGTFNPMPKLKVLYLNNNLLQVL 476
Query: 552 PRDVFSNTIIEKLDISYNQ 570
P +FS + ++++ NQ
Sbjct: 477 PPHIFSGVPLTRINLKTNQ 495
Score = 131 (51.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 40/133 (30%), Positives = 67/133 (50%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
TLE L + NN I+ + S NLT L + L N ++K+ +F +H L+ + L N
Sbjct: 390 TLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMF-LGLHN-LEYLYLEYN 447
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFV 384
++ I TF + +L + L+ NLL+ + F + + I L NQ ++ N
Sbjct: 448 GVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILD 506
Query: 385 NLPNLVKLDLQDN 397
+L L ++DL+DN
Sbjct: 507 DLDLLTQIDLEDN 519
Score = 121 (47.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 33/129 (25%), Positives = 64/129 (49%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N I + Y L +L ++L N+I + F N+ RL+++ L+ N+L
Sbjct: 370 LILAGNIIHTLMKYDLAEYFTLEMLHLGNNRIEVLEEGSF-MNL-TRLQKLYLNGNHLTK 427
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F L L + L YN +K I +F + + + L+ N ++ + P+ F +P L
Sbjct: 428 LSGGMFLGLHNLEYLYLEYNGVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-L 486
Query: 390 VKLDLQDNK 398
+++L+ N+
Sbjct: 487 TRINLKTNQ 495
Score = 111 (44.1 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 42/155 (27%), Positives = 74/155 (47%)
Query: 278 KNIRNYSLYNLTSLN--YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
K+I+ S ++ + +++L N ++ +H N F + + I L N + IE+ F
Sbjct: 53 KDIKKLSQISVPASRPFHLSLLNNGLTMLHANDFS-GLTNAIS-IHLGFNNIADIETGAF 110
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
L L + +++N L+ +K +F L N+ + N I I P+AF L L L L
Sbjct: 111 NGLGLLKKLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILN 170
Query: 396 DNKLKDFNLNVFSNITSKQTPM-NLNLSNNYITNL 429
DN ++ NVF + P+ +L+L N + L
Sbjct: 171 DNAIESLPPNVFRFV-----PLTHLDLRGNQLQTL 200
Score = 101 (40.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 38/134 (28%), Positives = 56/134 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N +T L+ N F L N + L FN + IE + N + +KL + S + + F
Sbjct: 76 NGLTMLHANDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILKEDTF- 134
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L LE+L DNN I I + L L + L N I + N+F F
Sbjct: 135 -----HGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNVFRF---VP 186
Query: 317 LKEIRLSNNYLELI 330
L + L N L+ +
Sbjct: 187 LTHLDLRGNQLQTL 200
Score = 92 (37.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 35/142 (24%), Positives = 66/142 (46%)
Query: 336 YNLKE---LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
Y+L E L + L N ++ ++ SF NL + + L+ N + + F+ L NL L
Sbjct: 383 YDLAEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYL 442
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ 452
L+ N +K+ F+ + + L L+NN + L + P+ ++L N+
Sbjct: 443 YLEYNGVKEILPGTFNPMPKLKV---LYLNNNLLQVLPPHIFSGVPL--TRINLKTNQFT 497
Query: 453 EVPVNFLQTFADSLRKLYLDFN 474
+PV+ + D L ++ L+ N
Sbjct: 498 HLPVSNILDDLDLLTQIDLEDN 519
Score = 65 (27.9 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 29/125 (23%), Positives = 55/125 (44%)
Query: 9 KLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNID 68
KLS +++ L + G T+L + G+ N+ + + ++ I+ AF+ +
Sbjct: 57 KLSQISVPASRPFHLSLLNNGLTMLHANDFSGLTNAI--SIHLGFNNIADIETGAFNGLG 114
Query: 69 ACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT 128
L I + +E L F +EN+E + D +N ++V+ + +KL L
Sbjct: 115 LLKKL--HINHNSLEILKEDTFHGLENLEFLQAD--NNFITVIEPSAF----SKLNRLKV 166
Query: 129 TILKD 133
IL D
Sbjct: 167 LILND 171
Score = 55 (24.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 3 LDLSHNKLSVLNMATLYS--NVTKLQHLGT--TILKGDQLQGIFNSKLRELEITGKDLKF 58
L ++HN L +L T + N+ LQ T+++ + ++L+ L + ++
Sbjct: 119 LHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKL--NRLKVLILNDNAIES 176
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPS-GLFDKIENIEQMTLDLSHNK 107
+ P+ F + + L + Q++ LP G + I I + L L NK
Sbjct: 177 LPPNVFRFVPLTH---LDLRGNQLQTLPYVGFLEHIGRI--LDLQLEDNK 221
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 243 (90.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 72/261 (27%), Positives = 127/261 (48%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +N I+++ + F +L + L +N + ++ D F L +L + LS N +
Sbjct: 66 LSLRHNHITELERD--QFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFY 123
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ T+F L N+ N+ LSFNQ+ ++P F L L L L+ N L+ + +F + S
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSL 183
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLD 472
+ L+LS N + +L N I ++ L L +N++ ++ +FL+ SL L+L
Sbjct: 184 EF---LDLSTNRLRSLARNGFAGL-IKLRELHLEHNQLTKINFAHFLRL--SSLHTLFLQ 237
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
+N+I +L LE L L N I + F MPNL+I+ + N+++ L +
Sbjct: 238 WNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKIL 297
Query: 533 YFSFKLRILNISHNRLRSLPR 553
L + +S N PR
Sbjct: 298 NSLRSLTTVGLSGNLWECSPR 318
Score = 213 (80.0 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 64/239 (26%), Positives = 117/239 (48%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L +N++ +E D F + +L + L +N + ++K +F+ L + ++LS N+I Y+
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
F L NL LDL N+L + +F + QT L+L +N + +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQT---LHLRSNSLRTIPVRLFWDCRS 182
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ LDLS NR++ + N LR+L+L+ N++ ++ F L L L L+ N
Sbjct: 183 -LEFLDLSTNRLRSLARNGFAGLI-KLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 240
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
I+ + L+ +DL+ NEI + F L+IL + +N+L SL + ++
Sbjct: 241 ISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNS 299
Score = 175 (66.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 76/280 (27%), Positives = 127/280 (45%)
Query: 196 RCNKIT---DLNGNLFRHLYNLQE---LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL 249
RC K+ D G F + N + L LS I EL + F F +L L + +
Sbjct: 39 RCEKLLFYCDSQG--FHSVPNTTDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQ 96
Query: 250 FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
++ + + + L L+ L + +N I + N + L +L ++L +N++S +H LF
Sbjct: 97 ISTVKEDAF---QGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELF 153
Query: 310 HFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ + K L+ + L +N L I F++ + L + LS N L+S+ F L + +
Sbjct: 154 -YGLRK-LQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELH 211
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L NQ+ I F+ L +L L LQ NK+ NL T T L+L+ N I +
Sbjct: 212 LEHNQLTKINFAHFLRLSSLHTLFLQWNKIS--NLTCGMEWTWG-TLEKLDLTGNEIKAI 268
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
+ P +K L + NN++ + L +SLR L
Sbjct: 269 DLTVFETMP-NLKILLMDNNKLNSLDSKIL----NSLRSL 303
Score = 170 (64.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 48/128 (37%), Positives = 72/128 (56%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L +N I E+ + +F+ L L+LD N+I + AF L L+ L L N I +
Sbjct: 66 LSLRHNHITELERDQFASFSQ-LTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYL 124
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIE 562
TF + NLQ +DLSFN++S L E FY KL+ L++ N LR++P +F + +E
Sbjct: 125 PNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLE 184
Query: 563 KLDISYNQ 570
LD+S N+
Sbjct: 185 FLDLSTNR 192
>RGD|1306550 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] InterPro:IPR001611 PROSITE:PS51450 RGD:1306550
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099859 EMBL:CH473951 CTD:84189 OMA:YFELKAN
OrthoDB:EOG4X0MRT IPI:IPI00205859 RefSeq:NP_001099527.1
UniGene:Rn.99063 Ensembl:ENSRNOT00000038433 GeneID:290467
KEGG:rno:290467 UCSC:RGD:1306550 NextBio:631101 Uniprot:D3ZP44
Length = 840
Score = 168 (64.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 40/131 (30%), Positives = 73/131 (55%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ NN + + LT+ I+L +N I+ I F N LK++ +++N LE+
Sbjct: 69 LSLLNNGLTTLHTNDFSGLTNALSIHLGFNNIADIETGAF--NGLGLLKQLHINHNSLEI 126
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++ DTF+ L+ L + N + I+ ++F LN + ++L+ N I+ + PN F +P L
Sbjct: 127 LKEDTFHGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-L 185
Query: 390 VKLDLQDNKLK 400
LDL+ N+L+
Sbjct: 186 THLDLRGNQLQ 196
Score = 160 (61.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 37/132 (28%), Positives = 70/132 (53%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L NN + + N ++L ++L FN I ++ AF L +L+ L + HN++ ++
Sbjct: 69 LSLLNNGLTTLHTNDFSGLTNAL-SIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEIL 127
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
+ TF G+ NL+ + N I+++ F +L++L ++ N + SLP ++F +
Sbjct: 128 KEDTFHGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLPPNIFRFVPLTH 187
Query: 564 LDISYNQDKIRP 575
LD+ NQ + P
Sbjct: 188 LDLRGNQLQTLP 199
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 47/170 (27%), Positives = 82/170 (48%)
Query: 404 LNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTF 462
+N S I+ + P +L+L NN +T L+ ND + S+ L N I ++
Sbjct: 53 INTLSQISVPPSRPFHLSLLNNGLTTLHTNDFSGLTNAL-SIHLGFNNIADIETGAFNGL 111
Query: 463 ADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
L++L+++ N ++ L F L+ LE L ++N I V+ + F + L+++ L+ N
Sbjct: 112 G-LLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDN 170
Query: 523 EISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572
I L F F L L++ N+L++LP F I LD+ +K
Sbjct: 171 AIESLPPNIFRF-VPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 219
Score = 133 (51.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 40/135 (29%), Positives = 66/135 (48%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + L NN +E++E +F NL L + L+ N L + F L+++ + L +N +K
Sbjct: 388 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNAVK 447
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNL-YENDK 434
I P F +P L L L +N L ++F I P+ +NL N T+L N
Sbjct: 448 EILPGTFNPMPKLKVLYLNNNLLHVLPAHIFLGI-----PLTRVNLKTNQFTHLPVSNIL 502
Query: 435 KQAPIYIKSLDLSNN 449
+ I+ +DL +N
Sbjct: 503 DDLDLLIQ-IDLEDN 516
Score = 130 (50.8 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 37/139 (26%), Positives = 71/139 (51%)
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+D + P + L L+ N I + L + +L L+L N I+ L+ +F NL L+
Sbjct: 355 SDLQPPPHNPRKLILAGNIIHTLMKADLMDYF-TLEMLHLGNNRIEVLEEGSFMNLTRLQ 413
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N++ + K F+G+ +L+ + L +N + + F KL++L +++N L L
Sbjct: 414 KLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLHVL 473
Query: 552 PRDVFSNTIIEKLDISYNQ 570
P +F + ++++ NQ
Sbjct: 474 PAHIFLGIPLTRVNLKTNQ 492
Score = 126 (49.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
TLE L + NN I+ + S NLT L + L N ++K++ +F + L+ + L N
Sbjct: 387 TLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMF-LGLSS-LEYLYLEYN 444
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFV 384
++ I TF + +L + L+ NLL + F + + + L NQ ++ N
Sbjct: 445 AVKEILPGTFNPMPKLKVLYLNNNLLHVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNILD 503
Query: 385 NLPNLVKLDLQDN 397
+L L+++DL+DN
Sbjct: 504 DLDLLIQIDLEDN 516
Score = 111 (44.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 39/163 (23%), Positives = 80/163 (49%)
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
+N ++L L+ N + + + +++ D F L++L + + E ++ NL L+ L
Sbjct: 362 HNPRKLILAGNIIHTL-MKADLMDYFT-LEMLHLGNNRIEVLEEGSFM---NLTRLQKLY 416
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
++ N++ + L+SL Y+ LEYN + +I F N +LK + L+NN L ++
Sbjct: 417 LNGNHLTKLYKGMFLGLSSLEYLYLEYNAVKEILPGTF--NPMPKLKVLYLNNNLLHVLP 474
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSF-KNLNNMLNIVLSFN 373
+ F + L + L N + ++ +L+ ++ I L N
Sbjct: 475 AHIFLGIP-LTRVNLKTNQFTHLPVSNILDDLDLLIQIDLEDN 516
Score = 110 (43.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 35/155 (22%), Positives = 74/155 (47%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N I + L + +L ++L N+I + F N+ RL+++ L+ N+L
Sbjct: 367 LILAGNIIHTLMKADLMDYFTLEMLHLGNNRIEVLEEGSF-MNL-TRLQKLYLNGNHLTK 424
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F L L + L YN +K I +F + + + L+ N + + + F+ +P L
Sbjct: 425 LYKGMFLGLSSLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLHVLPAHIFLGIP-L 483
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+++L+ N+ +L V + + + ++L +N
Sbjct: 484 TRVNLKTNQFT--HLPVSNILDDLDLLIQIDLEDN 516
Score = 105 (42.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
+++L N ++ +H N F + L I L N + IE+ F L L + +++N L+
Sbjct: 68 HLSLLNNGLTTLHTNDFS-GLTNALS-IHLGFNNIADIETGAFNGLGLLKQLHINHNSLE 125
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
+K +F L N+ + N I I +AF L L L L DN ++ N+F +
Sbjct: 126 ILKEDTFHGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLPPNIFRFV-- 183
Query: 413 KQTPM-NLNLSNNYITNL 429
P+ +L+L N + L
Sbjct: 184 ---PLTHLDLRGNQLQTL 198
Score = 101 (40.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 37/134 (27%), Positives = 56/134 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N +T L+ N F L N + L FN + IE + N + ++L + S + + F
Sbjct: 74 NGLTTLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTF- 132
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L LE+L DNN I I + L L + L N I + N+F F
Sbjct: 133 -----HGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLPPNIFRF---VP 184
Query: 317 LKEIRLSNNYLELI 330
L + L N L+ +
Sbjct: 185 LTHLDLRGNQLQTL 198
Score = 94 (38.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 34/157 (21%), Positives = 72/157 (45%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+++ L+ N + + + L + L N ++ ++ SF NL + + L+ N +
Sbjct: 365 RKLILAGNIIHTLMKADLMDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTK 424
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+Y F+ L +L L L+ N +K+ F+ + + L L+NN + L +
Sbjct: 425 LYKGMFLGLSSLEYLYLEYNAVKEILPGTFNPMPKLKV---LYLNNNLLHVLPAHIFLGI 481
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
P+ ++L N+ +PV+ + D L ++ L+ N
Sbjct: 482 PL--TRVNLKTNQFTHLPVSNILDDLDLLIQIDLEDN 516
Score = 81 (33.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 31/113 (27%), Positives = 53/113 (46%)
Query: 456 VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
V+ LQ + RKL L N I L + LE+L L +N I V+ + +F+ + LQ
Sbjct: 354 VSDLQPPPHNPRKLILAGNIIHTLMKADLMDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQ 413
Query: 516 IIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISY 568
+ L+ N ++ L F L L + +N ++ + F+ + KL + Y
Sbjct: 414 KLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNAVKEILPGTFNP--MPKLKVLY 464
Score = 73 (30.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 55/225 (24%), Positives = 100/225 (44%)
Query: 363 NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+N ++L+ N I + ++ L L L +N+++ F N+T Q L L+
Sbjct: 362 HNPRKLILAGNIIHTLMKADLMDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQ---KLYLN 418
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDA 481
N++T LY+ ++ L L N ++E+ P F L+ LYL+ N + L A
Sbjct: 419 GNHLTKLYKG-MFLGLSSLEYLYLEYNAVKEILPGTFNPM--PKLKVLYLNNNLLHVLPA 475
Query: 482 TAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI-IDLSFN--EISM-LTGEQFYFSFK 537
F + L ++L+ N + + +L I IDL N + S L G Q + K
Sbjct: 476 HIFLGIP-LTRVNLKTNQFTHLPVSNILDDLDLLIQIDLEDNPWDCSCDLVGLQQWIH-K 533
Query: 538 LRILNISHNRLRSLPRDVFSNTIIEKLDI-SYNQDKIRPGRESNP 581
L ++ + L + P ++K ++ + N + + PG +NP
Sbjct: 534 LGKGTVTDDILCASPGH------LDKKELKALNSELLCPGLVNNP 572
Score = 64 (27.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/126 (23%), Positives = 54/126 (42%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNI 67
N LS +++ L + G T L + G+ N+ + + ++ I+ AF+ +
Sbjct: 54 NTLSQISVPPSRPFHLSLLNNGLTTLHTNDFSGLTNAL--SIHLGFNNIADIETGAFNGL 111
Query: 68 DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLG 127
L I + +E L F +EN+E + D +N ++V+ + +KL L
Sbjct: 112 GLLKQL--HINHNSLEILKEDTFHGLENLEFLQAD--NNFITVIEQSAF----SKLNRLK 163
Query: 128 TTILKD 133
IL D
Sbjct: 164 VLILND 169
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 3 LDLSHNKLSVLNMATLYS--NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
L ++HN L +L T + N+ LQ I +Q ++L+ L + ++ +
Sbjct: 117 LHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLP 176
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPS-GLFDKIENIEQMTLDLSHNK 107
P+ F + + L + Q++ LP G + I I + L L NK
Sbjct: 177 PNIFRFVPLTH---LDLRGNQLQTLPYVGFLEHIGRI--LDLQLEDNK 219
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 245 (91.3 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 88/306 (28%), Positives = 150/306 (49%)
Query: 225 QIIELNSN-VFDVFEKL-QLLEISFSLFNSNEFPYY--ILNKNLNTLEWLAMDNNNIKNI 280
Q++ L SN + E+L QLL ++ + N F I N++ L L ++ N I +
Sbjct: 76 QVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVEM 135
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE 340
++SL +LT+L + + +N+IS I N F + L+ + L++N L+ I+S F +
Sbjct: 136 PDFSLQDLTNLQELYINHNQISSIAPNAFA-GLRNLLR-LHLNSNRLKAIDSRWFESTPN 193
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
L + + N + I +FK L N+ ++VL+ ++ I NAFV L NL L DNKL
Sbjct: 194 LEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFYDNKLV 253
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN-FL 459
+ + + L+L+ N I + E D K + +K L + NN + V ++ F
Sbjct: 254 RVPQTALQKLPNLKF---LDLNKNPIHKIQEGDFKNM-LRLKELGI-NNMGELVSIDRFA 308
Query: 460 QTFADSLRKLYLDFN-EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
L KL N + ++ AF +L LE L L +N + + + T +PNL+ I
Sbjct: 309 LDNLPELTKLEATNNPKFSYVSRLAFRDLPALESLMLNNNALNSLYQATADSLPNLREIS 368
Query: 519 LSFNEI 524
+ N +
Sbjct: 369 IHSNPL 374
Score = 182 (69.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 58/212 (27%), Positives = 100/212 (47%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L E+ LS N I N+ +L T+ L N + + S ++L N+ + ++ NQI
Sbjct: 98 LTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQIS 157
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
I PNAF L NL++L L N+LK + F + + + M + N + + + + K
Sbjct: 158 SIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILM---IGENPVVGILDLNFK- 213
Query: 437 APIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
P+ ++SL L+ + ++P N D+L L N++ + TA L L+ L L
Sbjct: 214 -PLTNLRSLVLAGMELTDIPGNAFVGL-DNLESLSFYDNKLVRVPQTALQKLPNLKFLDL 271
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
N I + + F M L++ +L N + L
Sbjct: 272 NKNPIHKIQEGDFKNM--LRLKELGINNMGEL 301
Score = 151 (58.2 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 55/207 (26%), Positives = 98/207 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQ-IIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N++ ++ F NL+ L + N + I++LN L L + + N F
Sbjct: 178 NRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFV 237
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L+ LE L+ +N + + +L L +L +++L N I KI F N+ R
Sbjct: 238 ------GLDNLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHKIQEGDFK-NM-LR 289
Query: 317 LKEIRLSNNYLELIESDTFY--NLKELNTITLSYNLLKS-IKTTSFKNLNNMLNIVLSFN 373
LKE+ + NN EL+ D F NL EL + + N S + +F++L + +++L+ N
Sbjct: 290 LKELGI-NNMGELVSIDRFALDNLPELTKLEATNNPKFSYVSRLAFRDLPALESLMLNNN 348
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLK 400
+ +Y +LPNL ++ + N L+
Sbjct: 349 ALNSLYQATADSLPNLREISIHSNPLR 375
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 51/200 (25%), Positives = 94/200 (47%)
Query: 386 LPNLVKLDLQDNK---LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
L NL +LDL N ++D L S +T+ L+L N I + + Q ++
Sbjct: 95 LLNLTELDLSQNNFSNIRDIGLTNMSQLTT------LHLEENQIVEM-PDFSLQDLTNLQ 147
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L +++N+I + N + LR L+L+ N +K +D+ F + LE+L + N +
Sbjct: 148 ELYINHNQISSIAPNAFAGLRNLLR-LHLNSNRLKAIDSRWFESTPNLEILMIGENPVVG 206
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-I 561
++ F + NL+ + L+ E++ + G F L L+ N+L +P+ +
Sbjct: 207 ILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFYDNKLVRVPQTALQKLPNL 266
Query: 562 EKLDISYNQ-DKIRPGRESN 580
+ LD++ N KI+ G N
Sbjct: 267 KFLDLNKNPIHKIQEGDFKN 286
Score = 120 (47.3 bits), Expect = 0.00094, P = 0.00094
Identities = 55/206 (26%), Positives = 96/206 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFP 256
N+I+ + N F L NL L L+ N+L+ I+ S F+ L++L I + + +
Sbjct: 154 NQISSIAPNAFAGLRNLLRLHLNSNRLKAID--SRWFESTPNLEILMIGENPVVGILDLN 211
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ L NL +L M+ +I L NL SL++ + NK+ ++ +
Sbjct: 212 FKPLT-NLRSLVLAGMELTDIPGNAFVGLDNLESLSFYD---NKLVRVPQTALQ-KL-PN 265
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNL--LKSIKTTSFKNLNNMLNIVLSFN- 373
LK + L+ N + I+ F N+ L + ++ N+ L SI + NL + + + N
Sbjct: 266 LKFLDLNKNPIHKIQEGDFKNMLRLKELGIN-NMGELVSIDRFALDNLPELTKLEATNNP 324
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKL 399
+ Y+ AF +LP L L L +N L
Sbjct: 325 KFSYVSRLAFRDLPALESLMLNNNAL 350
Score = 68 (29.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 36 DQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIEN 95
++L+ + N L EL+++ + I N+ TL + QI E+P + N
Sbjct: 90 EELEQLLN--LTELDLSQNNFSNIRDIGLTNMSQL--TTLHLEENQIVEMPDFSLQDLTN 145
Query: 96 IEQMTLDLSHNKLSVL--NMATLYSNVTKLQHLGTTILK 132
+++ L ++HN++S + N N+ +L HL + LK
Sbjct: 146 LQE--LYINHNQISSIAPNAFAGLRNLLRL-HLNSNRLK 181
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 242 (90.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 72/261 (27%), Positives = 126/261 (48%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +N I+ + + F +L + L +N + ++ D F L +L + LS N +
Sbjct: 66 LSLRHNHITALERD--QFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFY 123
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ T+F L N+ N+ LSFNQ+ ++P F L L L L+ N L+ + +F + S
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSL 183
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLD 472
+ L+LS N + +L N I ++ L L +N++ ++ +FL+ SL L+L
Sbjct: 184 EF---LDLSTNRLRSLARNGFAGL-IKLRELHLEHNQLTKINFAHFLRL--SSLHTLFLQ 237
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
+N+I +L LE L L N I + F MPNL+I+ + N+++ L +
Sbjct: 238 WNKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKIL 297
Query: 533 YFSFKLRILNISHNRLRSLPR 553
L + +S N PR
Sbjct: 298 SSLRSLTTVGLSGNLWECSPR 318
Score = 219 (82.2 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 65/239 (27%), Positives = 117/239 (48%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L +N++ +E D F + +L + L +N + ++K +F+ L + ++LS N+I Y+
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
F L NL LDL N+L + +F + QT L+L +N + +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQT---LHLRSNSLRTIPVRLFWDCRS 182
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ LDLS NR++ + N LR+L+L+ N++ ++ F L L L L+ N
Sbjct: 183 -LEFLDLSTNRLRSLARNGFAGLI-KLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 240
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
I+ + L+ +DL+ NEI + F L+IL + +N+L SL + S+
Sbjct: 241 ISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSS 299
Score = 170 (64.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 75/280 (26%), Positives = 125/280 (44%)
Query: 196 RCNKIT---DLNGNLFRHLYNLQE---LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL 249
RC K+ D G F + N + L LS I L + F F +L L + +
Sbjct: 39 RCEKLLFYCDSQG--FHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLTWLHLDHNQ 96
Query: 250 FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
++ + + + L L+ L + +N I + N + L +L ++L +N++S +H LF
Sbjct: 97 ISTVKEDAF---QGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELF 153
Query: 310 HFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ + K L+ + L +N L I F++ + L + LS N L+S+ F L + +
Sbjct: 154 -YGLRK-LQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELH 211
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L NQ+ I F+ L +L L LQ NK+ NL T T L+L+ N I +
Sbjct: 212 LEHNQLTKINFAHFLRLSSLHTLFLQWNKIS--NLTCGMEWTWS-TLEKLDLTGNEIKAI 268
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
+ P +K L + NN++ + L SLR L
Sbjct: 269 DLTVFETMP-NLKILLMDNNKLNSLDSKILS----SLRSL 303
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 52/163 (31%), Positives = 84/163 (51%)
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
N T K + + L+L +N+IT L E D+ + + L L +N+I V + Q L++
Sbjct: 57 NATDKGS-LGLSLRHNHITAL-ERDQFASFSQLTWLHLDHNQISTVKEDAFQGLY-KLKE 113
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT 528
L L N+I +L T F L L+ L L N ++ + F G+ LQ + L N + +
Sbjct: 114 LILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP 173
Query: 529 GEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
F+ L L++S NRLRSL R+ F+ I + +L + +NQ
Sbjct: 174 VRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQ 216
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 242 (90.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 72/261 (27%), Positives = 126/261 (48%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +N I+ + + F +L + L +N + ++ D F L +L + LS N +
Sbjct: 66 LSLRHNHITALERD--QFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFY 123
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ T+F L N+ N+ LSFNQ+ ++P F L L L L+ N L+ + +F + S
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSL 183
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLD 472
+ L+LS N + +L N I ++ L L +N++ ++ +FL+ SL L+L
Sbjct: 184 EF---LDLSTNRLRSLARNGFAGL-IKLRELHLEHNQLTKINFAHFLRL--SSLHTLFLQ 237
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
+N+I +L LE L L N I + F MPNL+I+ + N+++ L +
Sbjct: 238 WNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKIL 297
Query: 533 YFSFKLRILNISHNRLRSLPR 553
L + +S N PR
Sbjct: 298 NSLKSLTTVGLSGNLWECSPR 318
Score = 216 (81.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 64/239 (26%), Positives = 117/239 (48%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L +N++ +E D F + +L + L +N + ++K +F+ L + ++LS N+I Y+
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
F L NL LDL N+L + +F + QT L+L +N + +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQT---LHLRSNSLRTIPVRLFWDCRS 182
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ LDLS NR++ + N LR+L+L+ N++ ++ F L L L L+ N
Sbjct: 183 -LEFLDLSTNRLRSLARNGFAGLI-KLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 240
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
I+ + L+ +DL+ NEI + F L+IL + +N+L SL + ++
Sbjct: 241 ISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNS 299
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 75/285 (26%), Positives = 128/285 (44%)
Query: 196 RCNKIT---DLNGNLFRHLYNLQE---LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL 249
RC K+ D G F + N + L LS I L + F F +L L + +
Sbjct: 39 RCEKLLFYCDSQG--FHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLTWLHLDHNQ 96
Query: 250 FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
++ + + + L L+ L + +N I + N + L +L ++L +N++S +H LF
Sbjct: 97 ISTVKEDAF---QGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELF 153
Query: 310 HFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ + K L+ + L +N L I F++ + L + LS N L+S+ F L + +
Sbjct: 154 -YGLRK-LQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELH 211
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L NQ+ I F+ L +L L LQ NK+ NL + T T L+L+ N I +
Sbjct: 212 LEHNQLTKINFAHFLRLSSLHTLFLQWNKIS--NLTCGMDWTWS-TLEKLDLTGNEIKAI 268
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+ P +K L + NN++ + L + SL + L N
Sbjct: 269 DLTVFETMP-NLKILLMDNNKLNSLDSKILNSLK-SLTTVGLSGN 311
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 52/163 (31%), Positives = 84/163 (51%)
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
N T K + + L+L +N+IT L E D+ + + L L +N+I V + Q L++
Sbjct: 57 NATDKGS-LGLSLRHNHITAL-ERDQFASFSQLTWLHLDHNQISTVKEDAFQGLY-KLKE 113
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT 528
L L N+I +L T F L L+ L L N ++ + F G+ LQ + L N + +
Sbjct: 114 LILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP 173
Query: 529 GEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
F+ L L++S NRLRSL R+ F+ I + +L + +NQ
Sbjct: 174 VRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQ 216
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 246 (91.7 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 78/306 (25%), Positives = 149/306 (48%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
++LE L + +N+I ++ S + L Y+NL NKIS + F NI L ++++
Sbjct: 103 SSLESLDLSSNSISELKAGSFPPM-QLKYLNLSKNKISSLEPGCFG-NISSLLV-LKINQ 159
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N L L+ D + L +L + L N ++ +++ FK L + ++ + N I + A
Sbjct: 160 NRLSLLP-DKVFTLSQLQVLELRRNRIRVVESLIFKELKALKSLKMQRNGITKLMDGALF 218
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
L N+ +L+L+ N L + N + + L ++ N I L D + ++ L
Sbjct: 219 GLENMEELELEYNNLTELNKGWLYGLHMLRI---LRVNQNNI-GLIRADAWEFCHRLEEL 274
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
DLS N + + +++ L+ L L N+I HL F +L + L + +N I++ +
Sbjct: 275 DLSFNHLSRLE-DWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAI 333
Query: 505 KR---TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTII 561
+ F+G+ L + L N+I +T F +L L++S N + S+ D F++ +
Sbjct: 334 EDFIGMFVGLKRLNSLVLQNNKIRTITKRAFEGLMELENLDLSKNGIMSIHPDAFTHLKL 393
Query: 562 EKLDIS 567
+ LD++
Sbjct: 394 KTLDLN 399
Score = 219 (82.2 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 69/261 (26%), Positives = 136/261 (52%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI+ L F ++ +L L ++ N+L + L VF + +LQ+LE+ + E
Sbjct: 136 NKISSLEPGCFGNISSLLVLKINQNRLSL--LPDKVFTL-SQLQVLELRRNRIRVVES-- 190
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++ K L L+ L M N I + + +L+ L ++ + LEYN ++++ N + + +H L
Sbjct: 191 -LIFKELKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTEL-NKGWLYGLHM-L 247
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ +R++ N + LI +D + L + LS+N L ++ F L+ + ++ L NQI +
Sbjct: 248 RILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISH 307
Query: 378 IYPNAFVNLPNLVKLDLQDNKL----KDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
+ F +L N+ LD+++N++ +DF + +F + + L L NN I + +
Sbjct: 308 LGEGVFSSLANVRTLDIRNNEISLAIEDF-IGMFVGLKRLNS---LVLQNNKIRTITKR- 362
Query: 434 KKQAPIYIKSLDLSNNRIQEV 454
+ + +++LDLS N I +
Sbjct: 363 AFEGLMELENLDLSKNGIMSI 383
Score = 211 (79.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 84/334 (25%), Positives = 151/334 (45%)
Query: 245 ISFSLFNSNEFPYY-ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISK 303
++ + N NE L + + L++ +N I + L +SL ++L N IS+
Sbjct: 58 VTHASINQNELTAVPFLGDASSNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISE 117
Query: 304 IHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
+ F +LK + LS N + +E F N+ L + ++ N L + F L+
Sbjct: 118 LKAGSFP---PMQLKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVF-TLS 173
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN---KLKDFNLNVFSNITSKQTPMNLN 420
+ + L N+I+ + F L L L +Q N KL D L N+ L
Sbjct: 174 QLQVLELRRNRIRVVESLIFKELKALKSLKMQRNGITKLMDGALFGLENMEE------LE 227
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
L N +T L + + ++ L ++ N I + + + F L +L L FN + L+
Sbjct: 228 LEYNNLTELNKGWLYGLHM-LRILRVNQNNIGLIRADAWE-FCHRLEELDLSFNHLSRLE 285
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF---- 536
F L +L+ L+L N I+ + + F + N++ +D+ NEIS+ E F F
Sbjct: 286 DWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAI-EDFIGMFVGLK 344
Query: 537 KLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+L L + +N++R++ + F + +E LD+S N
Sbjct: 345 RLNSLVLQNNKIRTITKRAFEGLMELENLDLSKN 378
Score = 200 (75.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 87/344 (25%), Positives = 154/344 (44%)
Query: 68 DACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
DA ++T L + + +I E+ + ++E +LDLS N +S L + K +L
Sbjct: 76 DASSNITVLSLVHNRISEVVAEQLLPYSSLE--SLDLSSNSISELKAGSFPPMQLKYLNL 133
Query: 127 GTTILKDREKX----XXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSD 182
+ E N+++ L +F Q +++ ++N + +
Sbjct: 134 SKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFTLSQLQVLELRRNRIRVVESLIF 193
Query: 183 REKXXXXXXXXXXRCNKITDL-NGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQ 241
+E + N IT L +G LF L N++EL L +N L ELN L+
Sbjct: 194 KE--LKALKSLKMQRNGITKLMDGALFG-LENMEELELEYNNLT--ELNKGWLYGLHMLR 248
Query: 242 LLEIS---FSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEY 298
+L ++ L ++ + + + LE L + N++ + ++ L+ L +NL
Sbjct: 249 ILRVNQNNIGLIRADAWEF------CHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGD 302
Query: 299 NKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD---TFYNLKELNTITLSYNLLKSIK 355
N+IS + +F + R +IR NN + L D F LK LN++ L N +++I
Sbjct: 303 NQISHLGEGVFSSLANVRTLDIR--NNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTIT 360
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
+F+ L + N+ LS N I I+P+AF +L L LDL + L
Sbjct: 361 KRAFEGLMELENLDLSKNGIMSIHPDAFTHL-KLKTLDLNSSSL 403
Score = 183 (69.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 67/253 (26%), Positives = 118/253 (46%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN-NMLNIVLSFNQIKYI 378
+ L +N + + ++ L ++ LS N + +K SF + LN LS N+I +
Sbjct: 84 LSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPMQLKYLN--LSKNKISSL 141
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
P F N+ +L+ L + N+L VF+ ++ Q L L N I + K+
Sbjct: 142 EPGCFGNISSLLVLKINQNRLSLLPDKVFT-LSQLQV---LELRRNRIRVVESLIFKELK 197
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+KSL + N I ++ L +++ +L L++N + L+ L +L +L + N
Sbjct: 198 A-LKSLKMQRNGITKLMDGALFGL-ENMEELELEYNNLTELNKGWLYGLHMLRILRVNQN 255
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
NI ++ + L+ +DLSFN +S L F L+ LN+ N++ L VFS+
Sbjct: 256 NIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSS 315
Query: 559 TI-IEKLDISYNQ 570
+ LDI N+
Sbjct: 316 LANVRTLDIRNNE 328
Score = 172 (65.6 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 85/339 (25%), Positives = 144/339 (42%)
Query: 3 LDLSHNKLS--VLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS-KLRELEITGKDLKFI 59
L L HN++S V YS++ L +I + G F +L+ L ++ + +
Sbjct: 84 LSLVHNRISEVVAEQLLPYSSLESLDLSSNSI--SELKAGSFPPMQLKYLNLSKNKISSL 141
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQM-TLDLSHNKLSVLNMATLYS 118
+P F NI + L LKI ++ LP DK+ + Q+ L+L N++ V+ + ++
Sbjct: 142 EPGCFGNISSL--LVLKINQNRLSLLP----DKVFTLSQLQVLELRRNRIRVVE-SLIFK 194
Query: 119 NVT-----KLQHLGTTILKDREKXXXXXXXXXX-RCNKITDLNGNLFRHLQKSIVKAKKN 172
+ K+Q G T L D N +T+LN L +++ +
Sbjct: 195 ELKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTELNKGWLYGLH--MLRILRV 252
Query: 173 NNNNEDQV-SDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS 231
N NN + +D + N ++ L +F L LQ L+L N QI L
Sbjct: 253 NQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDN--QISHLGE 310
Query: 232 NVFDVFEKLQLLEI---SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
VF ++ L+I SL + ++ K LN+L + NN I+ I + L
Sbjct: 311 GVFSSLANVRTLDIRNNEISLAIEDFIGMFVGLKRLNSL---VLQNNKIRTITKRAFEGL 367
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
L ++L N I IH + F H +LK + L+++ L
Sbjct: 368 MELENLDLSKNGIMSIHPDAF---THLKLKTLDLNSSSL 403
Score = 124 (48.7 bits), Expect = 0.00055, P = 0.00055
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+AP ++ ++ N + VP FL + ++ L L N I + A LE L L
Sbjct: 53 EAPAWVTHASINQNELTAVP--FLGDASSNITVLSLVHNRISEVVAEQLLPYSSLESLDL 110
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
N+I+ + +F M L+ ++LS N+IS L F L +L I+ NRL LP V
Sbjct: 111 SSNSISELKAGSFPPM-QLKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKV 169
Query: 556 FSNTIIEKLDISYNQDKI 573
F+ + ++ L++ N+ ++
Sbjct: 170 FTLSQLQVLELRRNRIRV 187
>MGI|MGI:2443198 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2443198 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 HOGENOM:HOG000290667
HOVERGEN:HBG056407 CTD:84189 eggNOG:NOG113965 OMA:YFELKAN
OrthoDB:EOG4X0MRT EMBL:AB097575 EMBL:AK029275 IPI:IPI00223927
RefSeq:NP_780708.1 UniGene:Mm.49728 ProteinModelPortal:Q8C110
SMR:Q8C110 STRING:Q8C110 PhosphoSite:Q8C110 PRIDE:Q8C110
Ensembl:ENSMUST00000078386 GeneID:239250 KEGG:mmu:239250
InParanoid:Q8C110 NextBio:384048 Bgee:Q8C110 CleanEx:MM_SLITRK6
Genevestigator:Q8C110 GermOnline:ENSMUSG00000045871 Uniprot:Q8C110
Length = 840
Score = 166 (63.5 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 40/131 (30%), Positives = 73/131 (55%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ NN + + LT+ I+L +N I+ I F N LK++ +++N LE+
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNALSIHLGFNNIADIETGAF--NGLGLLKQLHINHNSLEI 126
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++ DTF+ L+ L + N + I+ ++F LN + ++L+ N I+ + PN F +P L
Sbjct: 127 LKEDTFHGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-L 185
Query: 390 VKLDLQDNKLK 400
LDL+ N+L+
Sbjct: 186 THLDLRGNQLQ 196
Score = 159 (61.0 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 37/132 (28%), Positives = 70/132 (53%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L NN + + N ++L ++L FN I ++ AF L +L+ L + HN++ ++
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAL-SIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEIL 127
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
+ TF G+ NL+ + N I+++ F +L++L ++ N + SLP ++F +
Sbjct: 128 KEDTFHGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVPLTH 187
Query: 564 LDISYNQDKIRP 575
LD+ NQ + P
Sbjct: 188 LDLRGNQLQTLP 199
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/170 (27%), Positives = 81/170 (47%)
Query: 404 LNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTF 462
+N S I+ + P +L+L NN +T L+ ND + S+ L N I ++
Sbjct: 53 INKLSQISVPPSRPFHLSLLNNGLTMLHTNDFSGLTNAL-SIHLGFNNIADIETGAFNGL 111
Query: 463 ADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
L++L+++ N ++ L F L+ LE L ++N I ++ F + L+++ L+ N
Sbjct: 112 G-LLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDN 170
Query: 523 EISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572
I L F F L L++ N+L++LP F I LD+ +K
Sbjct: 171 AIESLPPNIFRF-VPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 219
Score = 138 (53.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 38/134 (28%), Positives = 67/134 (50%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + L NN +E++E +F NL L + L+ N L + F L+++ + L +N +K
Sbjct: 388 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLHSLEYLYLEYNAVK 447
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKK 435
I P F +P L L L +N L+ ++F I P+ +NL N T+L ++
Sbjct: 448 EILPGTFNPMPKLKVLYLNNNLLQVLPAHIFLGI-----PLTRVNLKTNQFTHLPVSNIL 502
Query: 436 QAPIYIKSLDLSNN 449
++ +DL +N
Sbjct: 503 DDLDFLIQIDLEDN 516
Score = 136 (52.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 39/133 (29%), Positives = 69/133 (51%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
TLE L + NN I+ + S NLT L + L N ++K++ +F +H L+ + L N
Sbjct: 387 TLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMF-LGLHS-LEYLYLEYN 444
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFV 384
++ I TF + +L + L+ NLL+ + F + + + L NQ ++ N
Sbjct: 445 AVKEILPGTFNPMPKLKVLYLNNNLLQVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNILD 503
Query: 385 NLPNLVKLDLQDN 397
+L L+++DL+DN
Sbjct: 504 DLDFLIQIDLEDN 516
Score = 130 (50.8 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 37/139 (26%), Positives = 73/139 (52%)
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+D + P + L L+ N I + + L + +L L+L N I+ L+ +F NL L+
Sbjct: 355 SDLQPPPHNPRKLILAGNIIHTLMKSDLTDYF-TLEMLHLGNNRIEVLEEGSFMNLTRLQ 413
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N++ + K F+G+ +L+ + L +N + + F KL++L +++N L+ L
Sbjct: 414 KLYLNGNHLTKLNKGMFLGLHSLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLQVL 473
Query: 552 PRDVFSNTIIEKLDISYNQ 570
P +F + ++++ NQ
Sbjct: 474 PAHIFLGIPLTRVNLKTNQ 492
Score = 113 (44.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
+++L N ++ +H N F + L I L N + IE+ F L L + +++N L+
Sbjct: 68 HLSLLNNGLTMLHTNDFS-GLTNALS-IHLGFNNIADIETGAFNGLGLLKQLHINHNSLE 125
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
+K +F L N+ + N I I P+AF L L L L DN ++ N+F +
Sbjct: 126 ILKEDTFHGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFV-- 183
Query: 413 KQTPM-NLNLSNNYITNL 429
P+ +L+L N + L
Sbjct: 184 ---PLTHLDLRGNQLQTL 198
Score = 113 (44.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 40/163 (24%), Positives = 80/163 (49%)
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
+N ++L L+ N + + + S++ D F L++L + + E ++ NL L+ L
Sbjct: 362 HNPRKLILAGNIIHTL-MKSDLTDYFT-LEMLHLGNNRIEVLEEGSFM---NLTRLQKLY 416
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
++ N++ + L SL Y+ LEYN + +I F N +LK + L+NN L+++
Sbjct: 417 LNGNHLTKLNKGMFLGLHSLEYLYLEYNAVKEILPGTF--NPMPKLKVLYLNNNLLQVLP 474
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSF-KNLNNMLNIVLSFN 373
+ F + L + L N + ++ +L+ ++ I L N
Sbjct: 475 AHIFLGIP-LTRVNLKTNQFTHLPVSNILDDLDFLIQIDLEDN 516
Score = 111 (44.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 31/129 (24%), Positives = 64/129 (49%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N I + L + +L ++L N+I + F N+ RL+++ L+ N+L
Sbjct: 367 LILAGNIIHTLMKSDLTDYFTLEMLHLGNNRIEVLEEGSF-MNL-TRLQKLYLNGNHLTK 424
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F L L + L YN +K I +F + + + L+ N ++ + + F+ +P L
Sbjct: 425 LNKGMFLGLHSLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLQVLPAHIFLGIP-L 483
Query: 390 VKLDLQDNK 398
+++L+ N+
Sbjct: 484 TRVNLKTNQ 492
Score = 97 (39.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 37/134 (27%), Positives = 56/134 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N +T L+ N F L N + L FN + IE + N + ++L + S + + F
Sbjct: 74 NGLTMLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTF- 132
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L LE+L DNN I I + L L + L N I + N+F F
Sbjct: 133 -----HGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIESLPPNIFRF---VP 184
Query: 317 LKEIRLSNNYLELI 330
L + L N L+ +
Sbjct: 185 LTHLDLRGNQLQTL 198
Score = 88 (36.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 38/159 (23%), Positives = 77/159 (48%)
Query: 318 KEIRLSNNYLE-LIESD-TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+++ L+ N + L++SD T Y E+ + L N ++ ++ SF NL + + L+ N +
Sbjct: 365 RKLILAGNIIHTLMKSDLTDYFTLEM--LHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHL 422
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ F+ L +L L L+ N +K+ F+ + + L L+NN + L +
Sbjct: 423 TKLNKGMFLGLHSLEYLYLEYNAVKEILPGTFNPMPKLKV---LYLNNNLLQVLPAHIFL 479
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
P+ ++L N+ +PV+ + D L ++ L+ N
Sbjct: 480 GIPL--TRVNLKTNQFTHLPVSNILDDLDFLIQIDLEDN 516
Score = 72 (30.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 56/226 (24%), Positives = 101/226 (44%)
Query: 363 NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+N ++L+ N I + + + L L L +N+++ F N+T Q L L+
Sbjct: 362 HNPRKLILAGNIIHTLMKSDLTDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQ---KLYLN 418
Query: 423 NNYITNLYENDKKQAPIY-IKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLD 480
N++T L N ++ ++ L L N ++E+ P F L+ LYL+ N ++ L
Sbjct: 419 GNHLTKL--NKGMFLGLHSLEYLYLEYNAVKEILPGTFNPM--PKLKVLYLNNNLLQVLP 474
Query: 481 ATAFGNLDVLELLSLEHNNIA-VVVKRTFIGMPNLQIIDLSFN--EISM-LTGEQFYFSF 536
A F + L ++L+ N + V + L IDL N + S L G Q +
Sbjct: 475 AHIFLGIP-LTRVNLKTNQFTHLPVSNILDDLDFLIQIDLEDNPWDCSCDLVGLQQWIH- 532
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDI-SYNQDKIRPGRESNP 581
KL ++ + L + P ++K ++ + N D + PG +NP
Sbjct: 533 KLGKGTMTDDILCTSPGH------LDKKELKALNSDLLCPGLVNNP 572
Score = 69 (29.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 29/126 (23%), Positives = 56/126 (44%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNI 67
NKLS +++ L + G T+L + G+ N+ + + ++ I+ AF+ +
Sbjct: 54 NKLSQISVPPSRPFHLSLLNNGLTMLHTNDFSGLTNAL--SIHLGFNNIADIETGAFNGL 111
Query: 68 DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLG 127
L I + +E L F +EN+E + D +N ++++ + +KL L
Sbjct: 112 GLLKQL--HINHNSLEILKEDTFHGLENLEFLQAD--NNFITIIEPSAF----SKLNRLK 163
Query: 128 TTILKD 133
IL D
Sbjct: 164 VLILND 169
Score = 55 (24.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 26/110 (23%), Positives = 49/110 (44%)
Query: 3 LDLSHNKLSVLNMATLYS--NVTKLQHLGT--TILKGDQLQGIFNSKLRELEITGKDLKF 58
L ++HN L +L T + N+ LQ TI++ + ++L+ L + ++
Sbjct: 117 LHINHNSLEILKEDTFHGLENLEFLQADNNFITIIEPSAFSKL--NRLKVLILNDNAIES 174
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPS-GLFDKIENIEQMTLDLSHNK 107
+ P+ F + + L + Q++ LP G + I I + L L NK
Sbjct: 175 LPPNIFRFVPLTH---LDLRGNQLQTLPYVGFLEHIGRI--LDLQLEDNK 219
>UNIPROTKB|C4PCF3 [details] [associations]
symbol:TLR4 "Toll-like receptor" species:9031 "Gallus
gallus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0000187 "activation of MAPK activity"
evidence=IEA] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=IEA] [GO:0002537 "nitric oxide production involved in
inflammatory response" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0009897 "external side of plasma
membrane" evidence=IEA] [GO:0010572 "positive regulation of
platelet activation" evidence=IEA] [GO:0030890 "positive regulation
of B cell proliferation" evidence=IEA] [GO:0032497 "detection of
lipopolysaccharide" evidence=IEA] [GO:0032609 "interferon-gamma
production" evidence=IEA] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=IEA] [GO:0032700 "negative
regulation of interleukin-17 production" evidence=IEA] [GO:0032707
"negative regulation of interleukin-23 production" evidence=IEA]
[GO:0032715 "negative regulation of interleukin-6 production"
evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032722 "positive regulation
of chemokine production" evidence=IEA] [GO:0032727 "positive
regulation of interferon-alpha production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032732 "positive regulation of
interleukin-1 production" evidence=IEA] [GO:0032733 "positive
regulation of interleukin-10 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA] [GO:0032760 "positive regulation of tumor
necrosis factor production" evidence=IEA] [GO:0042116 "macrophage
activation" evidence=IEA] [GO:0042346 "positive regulation of
NF-kappaB import into nucleus" evidence=IEA] [GO:0042535 "positive
regulation of tumor necrosis factor biosynthetic process"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0045084 "positive
regulation of interleukin-12 biosynthetic process" evidence=IEA]
[GO:0045348 "positive regulation of MHC class II biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045416
"positive regulation of interleukin-8 biosynthetic process"
evidence=IEA] [GO:0045429 "positive regulation of nitric oxide
biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0050727 "regulation of inflammatory response"
evidence=IEA] [GO:0050829 "defense response to Gram-negative
bacterium" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0051770
"positive regulation of nitric-oxide synthase biosynthetic process"
evidence=IEA] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=IEA] [GO:0060907 "positive regulation of
macrophage cytokine production" evidence=IEA] [GO:0070373 "negative
regulation of ERK1 and ERK2 cascade" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:0070430 "positive regulation of nucleotide-binding
oligomerization domain containing 1 signaling pathway"
evidence=IEA] [GO:0070434 "positive regulation of
nucleotide-binding oligomerization domain containing 2 signaling
pathway" evidence=IEA] [GO:0071223 "cellular response to
lipoteichoic acid" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] InterPro:IPR000157
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 SMART:SM00255 GO:GO:0048471
GO:GO:0005887 GO:GO:0009897 GO:GO:0032689 GO:GO:0043123
GO:GO:0006954 GO:GO:0070374 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 SMART:SM00082 GO:GO:0045087 GO:GO:0032722
GO:GO:0032755 GO:GO:0000187 GO:GO:0050727 GO:GO:0032720
GO:GO:0032715 GO:GO:0030890 GO:GO:0051092 GO:GO:0070373
GO:GO:0032757 GO:GO:0071260 GO:GO:0045429 GO:GO:0042116
InterPro:IPR025875 Pfam:PF12799 GO:GO:0004888 GO:GO:0045416
GO:GO:0032729 GO:GO:0032760 GO:GO:0046696 GO:GO:0042535
GO:GO:0045348 GO:GO:0032735 GO:GO:0042346 GO:GO:0031663
GO:GO:0051770 GeneTree:ENSGT00700000104185 GO:GO:0032733
GO:GO:0060907 GO:GO:0032727 GO:GO:0032728 GO:GO:0007252
SUPFAM:SSF52200 GO:GO:0032700 GO:GO:0045084 GO:GO:0001875
GO:GO:0010572 GO:GO:0032707 GO:GO:0045359 PANTHER:PTHR24365:SF9
GO:GO:0032732 GO:GO:0070430 GO:GO:0070434 OMA:TNIIQEG
EMBL:AADN02026772 EMBL:FJ915487 EMBL:FJ915493 EMBL:FJ915527
IPI:IPI00572087 STRING:C4PCF3 Ensembl:ENSGALT00000011333
Uniprot:C4PCF3
Length = 843
Score = 236 (88.1 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 115/396 (29%), Positives = 190/396 (47%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNE 254
RC+ I + N F LYNL L L+ N LQ + L + + +KL L+E S S + ++
Sbjct: 91 RCH-IHTIEDNSFVDLYNLSTLILTANSLQHLGLAAFHGLTSLKKLVLVETSIS--SLSD 147
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY-NLTSLNYINLEYNKISKIHN-NLFHFN 312
P +LNTL+ L + +NNI +++ + NLTSL +++ N I+ I +L
Sbjct: 148 LPI----GHLNTLQELNLGHNNIASLKLPKYFANLTSLRHLSFSSNNITYISKGDLDALR 203
Query: 313 IHKRLK-EIRLSNNYLELIESDTF--YNLKELNTITLSYNLLKSIKTTSFKNLNNM-LN- 367
RL + LS N ++ I+S +F +L EL + S+ L ++ + S + L + +N
Sbjct: 204 ETNRLNLTLVLSLNNIKYIQSGSFAKIHLGEL-ILRSSFENLNAMHS-SLQGLAGLQVNR 261
Query: 368 -IVLSFNQIKYIYPNAFVN--LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
IV F I I AF N L L ++ +Q+ L F F N T N++
Sbjct: 262 LIVGEFTNILKI--TAFQNGLLSGLCQVQMQEFVLMCFR--EFDNDTDTLFDCIGNVTTI 317
Query: 425 YITNLYENDKKQAPIY--IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT 482
+ +L + P++ +K L+ + QE+P L F + LR L + ++ +
Sbjct: 318 RLVDLNLETLSEVPMFSQVKHLEWKKCKFQELPAEKLSLFKE-LRVLRITKSKDLNGFEQ 376
Query: 483 AFGNLDVLELLSLEHNNIAVVV--KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
FG+L LE++ L N ++ + F PNL+ ++LSFN LTGE F L
Sbjct: 377 KFGSLTHLEVVDLSENRLSFLTCCSPKFPRSPNLKHLNLSFNSDISLTGE-FANLRNLLY 435
Query: 541 LNISHNRL---RSLPRDVFSNTIIEKLDISYNQDKI 573
L++ H +L + P + +I LDISY + +
Sbjct: 436 LDLQHTKLIHHGTYPVFLLLQKLIY-LDISYTKTHV 470
Score = 161 (61.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 92/378 (24%), Positives = 171/378 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L+ N F + LQ L LS + IE NS V D++ L+ + SL + +
Sbjct: 68 NSLKLLSSNYFSSVPKLQFLDLSRCHIHTIEDNSFV-DLYNLSTLILTANSLQHLGLAAF 126
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L +L+ L + +I ++ + + +L +L +NL +N I+ + + N+ L
Sbjct: 127 H----GLTSLKKLVLVETSISSLSDLPIGHLNTLQELNLGHNNIASLKLPKYFANLTS-L 181
Query: 318 KEIRLSNNYLELIESDTFYNLKELN----TITLSYNLLKSIKTTSFKNLNNMLNIVL--S 371
+ + S+N + I L+E N T+ LS N +K I++ SF ++ + ++L S
Sbjct: 182 RHLSFSSNNITYISKGDLDALRETNRLNLTLVLSLNNIKYIQSGSFAKIH-LGELILRSS 240
Query: 372 FNQIKYIYPN----AFVNLPNLVKLDLQDN-KLKDFNLNVFSNITSKQTP----MNLNLS 422
F + ++ + A + + L+ + + K+ F + S + Q M
Sbjct: 241 FENLNAMHSSLQGLAGLQVNRLIVGEFTNILKITAFQNGLLSGLCQVQMQEFVLMCFREF 300
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT 482
+N L++ I + +DL+ + EVP+ F Q +K F E+ +
Sbjct: 301 DNDTDTLFDCIGNVTTIRL--VDLNLETLSEVPM-FSQVKHLEWKKC--KFQELPAEKLS 355
Query: 483 AFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT--GEQFYFSFKLRI 540
F L VL + + N ++ F + +L+++DLS N +S LT +F S L+
Sbjct: 356 LFKELRVLRITKSKDLN---GFEQKFGSLTHLEVVDLSENRLSFLTCCSPKFPRSPNLKH 412
Query: 541 LNISHNRLRSLPRDVFSN 558
LN+S N SL + F+N
Sbjct: 413 LNLSFNSDISLTGE-FAN 429
Score = 158 (60.7 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 102/388 (26%), Positives = 173/388 (44%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
+L LSFN L++ L+SN F KLQ L++S ++ E ++ NL+TL A N
Sbjct: 62 DLDLSFNSLKL--LSSNYFSSVPKLQFLDLSRCHIHTIEDNSFVDLYNLSTLILTA---N 116
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHN-NLFHFNIHKRLKEIRLSNNYLELIESDT 334
+++++ + + LTSL + L IS + + + H N L+E+ L +N + ++
Sbjct: 117 SLQHLGLAAFHGLTSLKKLVLVETSISSLSDLPIGHLNT---LQELNLGHNNIASLKLPK 173
Query: 335 FY-NLKELNTITLSYNLLKSIKTTSFKNLN--NMLNI--VLSFNQIKYIYPNAFVNLPNL 389
++ NL L ++ S N + I L N LN+ VLS N IKYI +F + +L
Sbjct: 174 YFANLTSLRHLSFSSNNITYISKGDLDALRETNRLNLTLVLSLNNIKYIQSGSFAKI-HL 232
Query: 390 VKLDLQDNKLKDF-NLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLD-LS 447
+L L+ + F NLN + S Q L + N I + N K L L
Sbjct: 233 GELILRSS----FENLNAMHS--SLQGLAGLQV-NRLIVGEFTNILKITAFQNGLLSGLC 285
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
++QE + + F + L+ + + NL+ L + + + K+
Sbjct: 286 QVQMQEFVLMCFREFDNDTDTLFDCIGNVTTIRLVDL-NLETLSEVPMFSQVKHLEWKKC 344
Query: 508 -FIGMP--NLQIID----LSFNEISMLTG-EQFYFSFK-LRILNISHNRLRSL----PRD 554
F +P L + L + L G EQ + S L ++++S NRL L P+
Sbjct: 345 KFQELPAEKLSLFKELRVLRITKSKDLNGFEQKFGSLTHLEVVDLSENRLSFLTCCSPKF 404
Query: 555 VFSNTIIEKLDISYNQDKIRPGRESNPR 582
S + + L++S+N D G +N R
Sbjct: 405 PRSPNL-KHLNLSFNSDISLTGEFANLR 431
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 109/451 (24%), Positives = 181/451 (40%)
Query: 10 LSVLNMATLYSNVTKLQHLGTTILKGD-QLQGIFNSKLRELEITGKDLKFIDPSAFDNID 68
LS+ N+ + S HLG IL+ + +S L+ L G + + F NI
Sbjct: 214 LSLNNIKYIQSGSFAKIHLGELILRSSFENLNAMHSSLQGL--AGLQVNRLIVGEFTNI- 270
Query: 69 ACYDLTLKITNTQIEELPSGLFD-KIENIEQMTLDLSHNKLSVLNMATLYSNVT--KLQH 125
LKIT Q L SGL +++ M N L NVT +L
Sbjct: 271 ------LKITAFQ-NGLLSGLCQVQMQEFVLMCFREFDNDTDTL--FDCIGNVTTIRLVD 321
Query: 126 LGTTILKDREKXXXXXXXXXXRCNKITDLNG---NLFRHLQKSIVKAKKNNNNNEDQVSD 182
L L + +C K +L +LF+ L+ + K+ N E +
Sbjct: 322 LNLETLSEVPMFSQVKHLEWKKC-KFQELPAEKLSLFKELRVLRITKSKDLNGFEQKFGS 380
Query: 183 REKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQL 242
R + +T + F NL+ L+LSFN I L F L
Sbjct: 381 LTHLEVVDLSEN-RLSFLTCCSPK-FPRSPNLKHLNLSFNS--DISLTGE-FANLRNLLY 435
Query: 243 LEISFS-LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
L++ + L + +P ++L L L +L + + + + L SL + + N
Sbjct: 436 LDLQHTKLIHHGTYPVFLL---LQKLIYLDISYTKTHVMSHLIFHGLNSLQVLKMAGNSF 492
Query: 302 SKIHNNLFH-FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
+N L + F +RL+ + +S+ L ++ TF L EL + +S N L + ++K
Sbjct: 493 E--NNTLTNNFENVRRLRILDISSCKLVWVDQSTFNALSELKELIISNNKLLTFDPVTYK 550
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPN-LVKLDLQDN--KLKDFNLNVFSNITSKQTPM 417
L + + S NQ+ ++ +A LP+ LV LD+ N + +LN + KQ
Sbjct: 551 PLQALTALDFSNNQMSFLSDSALEILPDSLVLLDISHNLFECSCTHLNFLKWVKEKQ--- 607
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
+L L N + + P Y+K++ LSN
Sbjct: 608 DL-LRNKHSMICH------TPAYMKNMSLSN 631
Score = 119 (46.9 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 98/398 (24%), Positives = 169/398 (42%)
Query: 198 NKITDLN-GNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N I L F +L +L+ LS S N + I D + L ++ L + N
Sbjct: 164 NNIASLKLPKYFANLTSLRHLSFSSNNITYISKGD--LDALRETNRLNLTLVL-SLNNIK 220
Query: 257 YYILNK--NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL---EYNKISKIHNNLFHF 311
Y ++ E + + N + SL L L L E+ I KI F
Sbjct: 221 YIQSGSFAKIHLGELILRSSFENLNAMHSSLQGLAGLQVNRLIVGEFTNILKI--TAFQN 278
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN-NMLNIVL 370
+ L ++++ L F N +T TL ++ + ++ T +LN L+ V
Sbjct: 279 GLLSGLCQVQMQEFVLMCFRE--FDN----DTDTL-FDCIGNVTTIRLVDLNLETLSEVP 331
Query: 371 SFNQIKYI-YPNA-FVNLP----NLVKLDLQDNKL-KDFNLNVFSNITSKQTPMNL-NLS 422
F+Q+K++ + F LP +L K +L+ ++ K +LN F T + + +LS
Sbjct: 332 MFSQVKHLEWKKCKFQELPAEKLSLFK-ELRVLRITKSKDLNGFEQKFGSLTHLEVVDLS 390
Query: 423 NNYITNLYENDKK--QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK--- 477
N ++ L K ++P +K L+LS N ++ FA+ LYLD K
Sbjct: 391 ENRLSFLTCCSPKFPRSP-NLKHLNLSFNS----DISLTGEFANLRNLLYLDLQHTKLIH 445
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN--EISMLTGEQFYFS 535
H F L L L + + V+ F G+ +LQ++ ++ N E + LT F
Sbjct: 446 HGTYPVFLLLQKLIYLDISYTKTHVMSHLIFHGLNSLQVLKMAGNSFENNTLTNN-FENV 504
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKI 573
+LRIL+IS +L + + F N + E ++ + +K+
Sbjct: 505 RRLRILDISSCKLVWVDQSTF-NALSELKELIISNNKL 541
Score = 118 (46.6 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 36/132 (27%), Positives = 69/132 (52%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTT-----ILKGDQLQGIFNSKLRELEITGKD 55
+ LDLS N L +L+ + +S+V KLQ L + ++ + ++N L L +T
Sbjct: 61 LDLDLSFNSLKLLS-SNYFSSVPKLQFLDLSRCHIHTIEDNSFVDLYN--LSTLILTANS 117
Query: 56 LKFIDPSAFDNIDACYDLTLKITN-TQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMA 114
L+ + +AF + + L L T+ + + +LP G + ++ L+L HN ++ L +
Sbjct: 118 LQHLGLAAFHGLTSLKKLVLVETSISSLSDLPIGHLNTLQE-----LNLGHNNIASLKLP 172
Query: 115 TLYSNVTKLQHL 126
++N+T L+HL
Sbjct: 173 KYFANLTSLRHL 184
Score = 105 (42.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 64/284 (22%), Positives = 122/284 (42%)
Query: 199 KITDLNGNLFRHLYNLQELS-LSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
++ DLN + ++ L + K + EL + +F++L++L I+ S + N F
Sbjct: 318 RLVDLNLETLSEVPMFSQVKHLEWKKCKFQELPAEKLSLFKELRVLRITKSK-DLNGFEQ 376
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYS--LYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+L LE + + N + + S +L ++NL +N + N+
Sbjct: 377 KF--GSLTHLEVVDLSENRLSFLTCCSPKFPRSPNLKHLNLSFNSDISLTGEFA--NLRN 432
Query: 316 RLKEIRLSNNYLELIESDT---FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
L L + +LI T F L++L + +SY + F LN++ + ++
Sbjct: 433 LLY---LDLQHTKLIHHGTYPVFLLLQKLIYLDISYTKTHVMSHLIFHGLNSLQVLKMAG 489
Query: 373 NQIKY-IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N + N F N+ L LD+ KL + + F+ ++ + L +SNN +
Sbjct: 490 NSFENNTLTNNFENVRRLRILDISSCKLVWVDQSTFNALSELK---ELIISNNKLLTFDP 546
Query: 432 NDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
K P+ + +LD SNN++ + + L+ DSL L + N
Sbjct: 547 VTYK--PLQALTALDFSNNQMSFLSDSALEILPDSLVLLDISHN 588
Score = 61 (26.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 24/111 (21%), Positives = 50/111 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVF-EKLQLLEISFSLFNSNEFP 256
NK+ + ++ L L L S N++ L+ + ++ + L LL+IS +LF +
Sbjct: 539 NKLLTFDPVTYKPLQALTALDFSNNQMSF--LSDSALEILPDSLVLLDISHNLFECS--- 593
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNN 307
+LN L+W+ + ++N + + + ++L +S H N
Sbjct: 594 ----CTHLNFLKWVKEKQDLLRNKHSMICHTPAYMKNMSLSNFDMSSCHPN 640
Score = 56 (24.8 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 52 TGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH------ 105
TG+++ + P+ N DL L + ++ L S F + ++ + L H
Sbjct: 45 TGQNISGV-PAEIPN--TTLDLDLSFNSLKL--LSSNYFSSVPKLQFLDLSRCHIHTIED 99
Query: 106 NK-LSVLNMATLYSNVTKLQHLG 127
N + + N++TL LQHLG
Sbjct: 100 NSFVDLYNLSTLILTANSLQHLG 122
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 241 (89.9 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 86/320 (26%), Positives = 152/320 (47%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L+ L + N I ++ + L NL L + L+ N++ + NLF +H L+E+ L+ N
Sbjct: 100 LKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVH--LQELFLNQNQ 157
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
L + + F +L L + LS N L + F + ++L N++ + +L
Sbjct: 158 LAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSL 217
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
L +L L N L+ F + S + L LS N + L + + L L
Sbjct: 218 RALTELQLHTNHLRSIVPGAFDRLRSLSS---LTLSENRLEFLPSALFLHSH-NLTFLTL 273
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN-NIAVVVK 505
S N ++E+P L LR+L L +++ L A AF NL L +L + + ++ + +
Sbjct: 274 SENPLEELP-KVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPE 332
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKL 564
F G+ LQ++ LS ++ L +LR +++ NRLR+LP +F N + +E++
Sbjct: 333 DAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLEEV 392
Query: 565 DISYNQDKIRPGR--ESNPR 582
+ +NQ + PG E+ PR
Sbjct: 393 QLDHNQLETLPGDAFEALPR 412
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 91/356 (25%), Positives = 155/356 (43%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNK 262
L N F + LQ L LS + + I F+ KL+ L +S + P +L+
Sbjct: 65 LQNNSFSDMTVLQRLLLSDSHVSAIA--PGTFNDPIKLKTLRLSRNKIT--HLPSALLD- 119
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF-HFNIHKRLKEIR 321
NL LE L +D N +K++ L L + L N+++ + +LF H LK +
Sbjct: 120 NLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLG---NLKLLD 176
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N L + F +L + L N L S+++ +L + + L N ++ I P
Sbjct: 177 LSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPG 236
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
AF L +L L L +N+L+ +F + S L LS N + L + + +
Sbjct: 237 AFDRLRSLSSLTLSENRLEFLPSALF--LHSHNLTF-LTLSENPLEELPKVLFGEIG-GL 292
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN-EIKHLDATAFGNLDVLELLSLEHNNI 500
+ L L + +++ +P + LR L + + + L AF L L++L+L +
Sbjct: 293 RELRLKSTQLRTLPAAAFRNLT-GLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGL 351
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
A + G+ L+ + L N + L F L + + HN+L +LP D F
Sbjct: 352 ASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAF 407
Score = 206 (77.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 75/280 (26%), Positives = 133/280 (47%)
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
T+L +I L + NN F+ L+ + LS++++ I TF + +L T+ LS
Sbjct: 50 TNLTHILLFQMGRGTLQNN--SFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSR 107
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N + + + NL + + L N++K + N F L +L +L L N+L ++F+
Sbjct: 108 NKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFT 167
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
++ + + L+LS N +T+L E + ++ L L +NR+ + L + +L +
Sbjct: 168 HLGNLKL---LDLSGNNLTHLPEG-LFGVQVKLQKLLLHSNRLASLESGLLDSLR-ALTE 222
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT 528
L L N ++ + AF L L L+L N + + F+ NL + LS N + L
Sbjct: 223 LQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELP 282
Query: 529 GEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDIS 567
F LR L + +LR+LP F N T + L++S
Sbjct: 283 KVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVS 322
Score = 204 (76.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 95/408 (23%), Positives = 178/408 (43%)
Query: 10 LSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDA 69
++ L + T +++ Q +G L+ + + + L+ L ++ + I P F+ D
Sbjct: 43 IAALGLPTNLTHILLFQ-MGRGTLQNNSFSDM--TVLQRLLLSDSHVSAIAPGTFN--DP 97
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTT 129
TL+++ +I LPS L D + +EQ+ LD N+L L+ L+ KL HL
Sbjct: 98 IKLKTLRLSRNKITHLPSALLDNLVLLEQLFLD--GNELKSLDQ-NLFQ---KLVHLQEL 151
Query: 130 ILKDREKXXXXXXXXXXRCN-KITDLNGNLFRHLQKSI----VKAKK---NNNNNEDQVS 181
L + N K+ DL+GN HL + + VK +K ++N S
Sbjct: 152 FLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLES 211
Query: 182 DREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQ 241
N + + F L +L L+LS N+L+ L S +F L
Sbjct: 212 GLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEF--LPSALFLHSHNLT 269
Query: 242 LLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN-K 300
L +S + E P + + + L L + + ++ + + NLT L + + + +
Sbjct: 270 FLTLSENPLE--ELPKVLFGE-IGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPR 326
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
+S + + F + + L+ + LS+ L + + L L ++L N L+++ + F+
Sbjct: 327 LSALPEDAFR-GLGE-LQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFR 384
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVF 407
NL+++ + L NQ++ + +AF LP L + L N + D L F
Sbjct: 385 NLSSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHNPWRCDCGLGPF 432
Score = 193 (73.0 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 86/346 (24%), Positives = 159/346 (45%)
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILN--KNLN 265
F L+ L LS NK I L S + D L LLE F + NE N + L
Sbjct: 94 FNDPIKLKTLRLSRNK--ITHLPSALLD---NLVLLEQLF--LDGNELKSLDQNLFQKLV 146
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
L+ L ++ N + + +L +L ++L N ++ + LF + +L+++ L +N
Sbjct: 147 HLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLF--GVQVKLQKLLLHSN 204
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA-FV 384
L +ES +L+ L + L N L+SI +F L ++ ++ LS N+++++ P+A F+
Sbjct: 205 RLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFL-PSALFL 263
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
+ NL L L +N L++ +F I + L L + + L + ++ L
Sbjct: 264 HSHNLTFLTLSENPLEELPKVLFGEIGGLR---ELRLKSTQLRTLPAAAFRNLT-GLRVL 319
Query: 445 DLS-NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
++S + R+ +P + + + L+ L L + L A L L +SL N + +
Sbjct: 320 EVSLSPRLSALPEDAFRGLGE-LQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRAL 378
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
F + +L+ + L N++ L G+ F +L + + HN R
Sbjct: 379 PSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHNPWR 424
Score = 174 (66.3 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 59/194 (30%), Positives = 97/194 (50%)
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
NL +++ + L++ N FS++T Q L LS+++++ + PI +K+L
Sbjct: 51 NLTHILLFQMGRGTLQN---NSFSDMTVLQ---RLLLSDSHVSAIAPGTFND-PIKLKTL 103
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
LS N+I +P L L +L+LD NE+K LD F L L+ L L N +A +
Sbjct: 104 RLSRNKITHLPSALLDNLV-LLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLP 162
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEK 563
F + NL+++DLS N ++ L F KL+ L + NRL SL + + + +
Sbjct: 163 ASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTE 222
Query: 564 LDISYNQDK-IRPG 576
L + N + I PG
Sbjct: 223 LQLHTNHLRSIVPG 236
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 80/336 (23%), Positives = 145/336 (43%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKD 55
TL LS NK++ L A L N+ L+ L L G++L Q +F L+EL +
Sbjct: 102 TLRLSRNKITHLPSALL-DNLVLLEQL---FLDGNELKSLDQNLFQKLVHLQELFLNQNQ 157
Query: 56 LKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMAT 115
L F+ S F ++ L L N + LP GLF ++++ L N+L+ L
Sbjct: 158 LAFLPASLFTHLGNLKLLDLSGNN--LTHLPEGLFGVQVKLQKLLLH--SNRLASLESGL 213
Query: 116 LYS--NVTKLQ----HLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
L S +T+LQ HL + + ++ N++ L LF H ++
Sbjct: 214 LDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSE-NRLEFLPSALFLH-SHNLTFL 271
Query: 170 KKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIEL 229
+ N E+ + ++ L FR+L L+ L +S + ++ L
Sbjct: 272 TLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSP-RLSAL 330
Query: 230 NSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLT 289
+ F +LQ+L +S + S P +L + L L +++ +N ++ + + NL+
Sbjct: 331 PEDAFRGLGELQVLALSSTGLAS--LPAGLL-RGLCRLRHVSLRSNRLRALPSALFRNLS 387
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
SL + L++N++ + + F RL + L +N
Sbjct: 388 SLEEVQLDHNQLETLPGDAFE--ALPRLAGVLLGHN 421
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 241 (89.9 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 78/273 (28%), Positives = 141/273 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ N+I+ +++ L L ++ L++N IS + + F I +RLKE+ LS+N +
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQ-GI-RRLKELILSSNKITY 123
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ + TF+ + L + LSYN L+++++ FK L ++ + L N +K + F + NL
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSN 448
LDL N+L+ + N F+ + + L+L +N + + N ++ ++S+ L
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLK---ELHLEHNQFSKI--NFAHFPRLFNLRSIYLQW 238
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
NRI+ V T++ SL L L N+I+ ++ F L L+ L+L+ N + V + T
Sbjct: 239 NRIRSVSQGLTWTWS-SLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETV 297
Query: 509 IGMPNLQIIDLSFN--EISMLTGEQFYF--SFK 537
+L I LS N E S FY+ +FK
Sbjct: 298 NAWISLISITLSGNMWECSRSICPLFYWLKNFK 330
Score = 231 (86.4 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 66/254 (25%), Positives = 126/254 (49%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +N I K+ +N F +++ L + L +NY+ ++ D F ++ L + LS N +
Sbjct: 66 LSLRFNSIQKLKSNQFA-GLNQ-LIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ +F + N+ N+ LS+N+++ + F L L+ L L+ N LK + VF + +
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLD 472
L+L N + +L N + +K L L +N+ ++ +F + F +LR +YL
Sbjct: 184 DF---LDLGYNRLRSLSRN-AFAGLLKLKELHLEHNQFSKINFAHFPRLF--NLRSIYLQ 237
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
+N I+ + L L L N+I + TF +PNLQ ++L N+++ ++ E
Sbjct: 238 WNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETV 297
Query: 533 YFSFKLRILNISHN 546
L + +S N
Sbjct: 298 NAWISLISITLSGN 311
Score = 211 (79.3 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 67/252 (26%), Positives = 123/252 (48%)
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN 287
++ N+ + L L S SN+F LN L WL +D+N I ++ +
Sbjct: 54 DIPENISGGSQGLSLRFNSIQKLKSNQFA------GLNQLIWLYLDHNYISSVDEDAFQG 107
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
+ L + L NKI+ +HN FH + L+ + LS N L+ ++S+ F L++L + L
Sbjct: 108 IRRLKELILSSNKITYLHNKTFH-PV-PNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLR 165
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N LK++ F++ N+ + L +N+++ + NAF L L +L L+ N+ N F
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 408 SNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
+ + ++ + L N I ++ + + +LDLS N IQ + + + L+
Sbjct: 226 PRLFNLRS---IYLQWNRIRSVSQG-LTWTWSSLHTLDLSGNDIQAIEPGTFKCLPN-LQ 280
Query: 468 KLYLDFNEIKHL 479
KL LD N++ ++
Sbjct: 281 KLNLDSNKLTNV 292
Score = 196 (74.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 65/259 (25%), Positives = 124/259 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI + + L N ++ ++S+ F L +L + L +N + S+ +F+ + + ++LS
Sbjct: 58 NISGGSQGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILS 117
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT---N 428
N+I Y++ F +PNL LDL NKL+ F + K ++L SN+ T
Sbjct: 118 SNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLR-KLIILHLR-SNSLKTVPIR 175
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLD 488
++++ + + LDL NR++ + N L++L+L+ N+ ++ F L
Sbjct: 176 VFQDCRN-----LDFLDLGYNRLRSLSRNAFAGLL-KLKELHLEHNQFSKINFAHFPRLF 229
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L + L+ N I V + +L +DLS N+I + F L+ LN+ N+L
Sbjct: 230 NLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKL 289
Query: 549 RSLPRDVFSNTIIEKLDIS 567
++ ++ N I + I+
Sbjct: 290 TNVSQETV-NAWISLISIT 307
Score = 186 (70.5 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 65/252 (25%), Positives = 115/252 (45%)
Query: 147 RCNKITDLNGNLFRHLQKSI-VKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG 205
R N I L N F L + I + N ++ D+ D + NKIT L+
Sbjct: 69 RFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDE--DAFQGIRRLKELILSSNKITYLHN 126
Query: 206 NLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
F + NL+ L LS+NKLQ ++ S F KL +L + + + P + ++
Sbjct: 127 KTFHPVPNLRNLDLSYNKLQTLQ--SEQFKGLRKLIILHLRSNSLKT--VPIRVF-QDCR 181
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
L++L + N ++++ + L L ++LE+N+ SKI N HF L+ I L N
Sbjct: 182 NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKI--NFAHFPRLFNLRSIYLQWN 239
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
+ + + L+T+ LS N +++I+ +FK L N+ + L N++ +
Sbjct: 240 RIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNA 299
Query: 386 LPNLVKLDLQDN 397
+L+ + L N
Sbjct: 300 WISLISITLSGN 311
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 63/240 (26%), Positives = 115/240 (47%)
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
Q LSL FN +Q +L SN F +L L + + +S + + + + L+ L + +
Sbjct: 64 QGLSLRFNSIQ--KLKSNQFAGLNQLIWLYLDHNYISSVDEDAF---QGIRRLKELILSS 118
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N I + N + + + +L ++L YNK+ + + F + K L + L +N L+ +
Sbjct: 119 NKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-GLRK-LIILHLRSNSLKTVPIRV 176
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F + + L+ + L YN L+S+ +F L + + L NQ I F L NL + L
Sbjct: 177 FQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYL 236
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
Q N+++ + + +S T L+LS N I + K P ++ L+L +N++ V
Sbjct: 237 QWNRIRSVSQGLTWTWSSLHT---LDLSGNDIQAIEPGTFKCLP-NLQKLNLDSNKLTNV 292
Score = 174 (66.3 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 47/130 (36%), Positives = 72/130 (55%)
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+ L L N IQ++ N + L LYLD N I +D AF + L+ L L N I
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGL-NQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKIT 122
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI- 560
+ +TF +PNL+ +DLS+N++ L EQF KL IL++ N L+++P VF +
Sbjct: 123 YLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRN 182
Query: 561 IEKLDISYNQ 570
++ LD+ YN+
Sbjct: 183 LDFLDLGYNR 192
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 241 (89.9 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 78/273 (28%), Positives = 141/273 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ N+I+ +++ L L ++ L++N IS + + F I +RLKE+ LS+N +
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQ-GI-RRLKELILSSNKITY 123
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ + TF+ + L + LSYN L+++++ FK L ++ + L N +K + F + NL
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSN 448
LDL N+L+ + N F+ + + L+L +N + + N ++ ++S+ L
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLK---ELHLEHNQFSKI--NFAHFPRLFNLRSIYLQW 238
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
NRI+ V T++ SL L L N+I+ ++ F L L+ L+L+ N + V + T
Sbjct: 239 NRIRSVSQGLTWTWS-SLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETV 297
Query: 509 IGMPNLQIIDLSFN--EISMLTGEQFYF--SFK 537
+L I LS N E S FY+ +FK
Sbjct: 298 NAWISLISITLSGNMWECSRSICPLFYWLKNFK 330
Score = 231 (86.4 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 66/254 (25%), Positives = 126/254 (49%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +N I K+ +N F +++ L + L +NY+ ++ D F ++ L + LS N +
Sbjct: 66 LSLRFNSIQKLKSNQFA-GLNQ-LIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ +F + N+ N+ LS+N+++ + F L L+ L L+ N LK + VF + +
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLD 472
L+L N + +L N + +K L L +N+ ++ +F + F +LR +YL
Sbjct: 184 DF---LDLGYNRLRSLSRN-AFAGLLKLKELHLEHNQFSKINFAHFPRLF--NLRSIYLQ 237
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
+N I+ + L L L N+I + TF +PNLQ ++L N+++ ++ E
Sbjct: 238 WNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETV 297
Query: 533 YFSFKLRILNISHN 546
L + +S N
Sbjct: 298 NAWISLISITLSGN 311
Score = 211 (79.3 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 67/252 (26%), Positives = 123/252 (48%)
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN 287
++ N+ + L L S SN+F LN L WL +D+N I ++ +
Sbjct: 54 DIPENISGGSQGLSLRFNSIQKLKSNQFA------GLNQLIWLYLDHNYISSVDEDAFQG 107
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
+ L + L NKI+ +HN FH + L+ + LS N L+ ++S+ F L++L + L
Sbjct: 108 IRRLKELILSSNKITYLHNKTFH-PV-PNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLR 165
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N LK++ F++ N+ + L +N+++ + NAF L L +L L+ N+ N F
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 408 SNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
+ + ++ + L N I ++ + + +LDLS N IQ + + + L+
Sbjct: 226 PRLFNLRS---IYLQWNRIRSVSQG-LTWTWSSLHTLDLSGNDIQAIEPGTFKCLPN-LQ 280
Query: 468 KLYLDFNEIKHL 479
KL LD N++ ++
Sbjct: 281 KLNLDSNKLTNV 292
Score = 196 (74.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 65/259 (25%), Positives = 124/259 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI + + L N ++ ++S+ F L +L + L +N + S+ +F+ + + ++LS
Sbjct: 58 NISGGSQGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILS 117
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT---N 428
N+I Y++ F +PNL LDL NKL+ F + K ++L SN+ T
Sbjct: 118 SNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLR-KLIILHLR-SNSLKTVPIR 175
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLD 488
++++ + + LDL NR++ + N L++L+L+ N+ ++ F L
Sbjct: 176 VFQDCRN-----LDFLDLGYNRLRSLSRNAFAGLL-KLKELHLEHNQFSKINFAHFPRLF 229
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L + L+ N I V + +L +DLS N+I + F L+ LN+ N+L
Sbjct: 230 NLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKL 289
Query: 549 RSLPRDVFSNTIIEKLDIS 567
++ ++ N I + I+
Sbjct: 290 TNVSQETV-NAWISLISIT 307
Score = 186 (70.5 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 65/252 (25%), Positives = 115/252 (45%)
Query: 147 RCNKITDLNGNLFRHLQKSI-VKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG 205
R N I L N F L + I + N ++ D+ D + NKIT L+
Sbjct: 69 RFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDE--DAFQGIRRLKELILSSNKITYLHN 126
Query: 206 NLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
F + NL+ L LS+NKLQ ++ S F KL +L + + + P + ++
Sbjct: 127 KTFHPVPNLRNLDLSYNKLQTLQ--SEQFKGLRKLIILHLRSNSLKT--VPIRVF-QDCR 181
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
L++L + N ++++ + L L ++LE+N+ SKI N HF L+ I L N
Sbjct: 182 NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKI--NFAHFPRLFNLRSIYLQWN 239
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
+ + + L+T+ LS N +++I+ +FK L N+ + L N++ +
Sbjct: 240 RIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNA 299
Query: 386 LPNLVKLDLQDN 397
+L+ + L N
Sbjct: 300 WISLISITLSGN 311
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 63/240 (26%), Positives = 115/240 (47%)
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
Q LSL FN +Q +L SN F +L L + + +S + + + + L+ L + +
Sbjct: 64 QGLSLRFNSIQ--KLKSNQFAGLNQLIWLYLDHNYISSVDEDAF---QGIRRLKELILSS 118
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N I + N + + + +L ++L YNK+ + + F + K L + L +N L+ +
Sbjct: 119 NKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-GLRK-LIILHLRSNSLKTVPIRV 176
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F + + L+ + L YN L+S+ +F L + + L NQ I F L NL + L
Sbjct: 177 FQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYL 236
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
Q N+++ + + +S T L+LS N I + K P ++ L+L +N++ V
Sbjct: 237 QWNRIRSVSQGLTWTWSSLHT---LDLSGNDIQAIEPGTFKCLP-NLQKLNLDSNKLTNV 292
Score = 174 (66.3 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 47/130 (36%), Positives = 72/130 (55%)
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+ L L N IQ++ N + L LYLD N I +D AF + L+ L L N I
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGL-NQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKIT 122
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI- 560
+ +TF +PNL+ +DLS+N++ L EQF KL IL++ N L+++P VF +
Sbjct: 123 YLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRN 182
Query: 561 IEKLDISYNQ 570
++ LD+ YN+
Sbjct: 183 LDFLDLGYNR 192
>UNIPROTKB|A0N0X6 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:EF093509 IPI:IPI00699748 RefSeq:NP_001074207.1
UniGene:Bt.17579 ProteinModelPortal:A0N0X6 PRIDE:A0N0X6
Ensembl:ENSBTAT00000001560 GeneID:539619 KEGG:bta:539619 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 InParanoid:A0N0X6 OMA:GINNMGE OrthoDB:EOG4XKV6G
BioCyc:CATTLE:539619-MONOMER NextBio:20878110 Uniprot:A0N0X6
Length = 716
Score = 242 (90.2 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 86/307 (28%), Positives = 148/307 (48%)
Query: 225 QIIELNSN-VFDVFEKLQ----LLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKN 279
Q++ L SN + ++LQ L E+ FS N L NL L L ++ N I
Sbjct: 75 QVLLLQSNNIAKTVDELQQLFNLTELDFSQNNFTNIKEVGL-ANLTQLTTLHLEENQITE 133
Query: 280 IRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLK 339
+ +Y L +L++L + + +N+IS I N F + K L + L++N L++I+S F +
Sbjct: 134 MNDYCLQDLSNLQELYINHNQISTISANAFS-GL-KNLLRLHLNSNKLKVIDSRWFDSTP 191
Query: 340 ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
L + + N + I +FK L+N+ ++VL+ + I NA V L +L L DNKL
Sbjct: 192 NLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKL 251
Query: 400 KDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNF 458
+ + + L+L+ N I + E D K + +K L ++N + V
Sbjct: 252 VKVPQLALQKVPNLKF---LDLNKNPIHKIQEGDFKNM-LRLKELGINNMGELVSVDRYA 307
Query: 459 LQTFADSLRKLYLDFN-EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
L + L KL N ++ ++ AF ++ LE L L +N + V ++T +PNL+ I
Sbjct: 308 LDNLPE-LTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREI 366
Query: 518 DLSFNEI 524
+ N +
Sbjct: 367 SIHSNPL 373
Score = 180 (68.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 73/269 (27%), Positives = 124/269 (46%)
Query: 268 EWLAMDNNNIKNIRNYSLYNLTS-LNYINLEYNKISKIHNNLFH-FNIHKRLKEIRLSNN 325
E +D N+++ R S NL+S + L+ N I+K + L FN L E+ S N
Sbjct: 52 EATTVDCNDLRLTRIPS--NLSSDTQVLLLQSNNIAKTVDELQQLFN----LTELDFSQN 105
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
I+ NL +L T+ L N + + ++L+N+ + ++ NQI I NAF
Sbjct: 106 NFTNIKEVGLANLTQLTTLHLEENQITEMNDYCLQDLSNLQELYINHNQISTISANAFSG 165
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSL 444
L NL++L L NKLK + F + + + M + N + + + + K P+ ++SL
Sbjct: 166 LKNLLRLHLNSNKLKVIDSRWFDSTPNLEILM---IGENPVIGILDMNFK--PLSNLRSL 220
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
L+ + ++P N L DSL L N++ + A + L+ L L N I +
Sbjct: 221 VLAGMYLTDIPGNALVGL-DSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQ 279
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
+ F M L++ +L N + L Y
Sbjct: 280 EGDFKNM--LRLKELGINNMGELVSVDRY 306
Score = 161 (61.7 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 65/251 (25%), Positives = 111/251 (44%)
Query: 323 SNNYLELI-ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
SNN + + E +NL EL+ S N +IK NL + + L NQI +
Sbjct: 81 SNNIAKTVDELQQLFNLTELD---FSQNNFTNIKEVGLANLTQLTTLHLEENQITEMNDY 137
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
+L NL +L + N++ + N FS + + + L+L++N + + P +
Sbjct: 138 CLQDLSNLQELYINHNQISTISANAFSGLKNL---LRLHLNSNKLKVIDSRWFDSTP-NL 193
Query: 442 KSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
+ L + N + + +NF +LR L L + + A LD LE LS N +
Sbjct: 194 EILMIGENPVIGILDMNFKPL--SNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKL 251
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH-NRLRSLPRDVFSNT 559
V + +PNL+ +DL+ N I + F +L+ L I++ L S+ R N
Sbjct: 252 VKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNL 311
Query: 560 I-IEKLDISYN 569
+ KL+ + N
Sbjct: 312 PELTKLEATNN 322
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/273 (20%), Positives = 128/273 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT++N + L NLQEL ++ N QI +++N F + L L ++ + + +
Sbjct: 129 NQITEMNDYCLQDLSNLQELYINHN--QISTISANAFSGLKNLLRLHLNSNKLKVIDSRW 186
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ NL E L + N + I + + L++L + L ++ I N + L
Sbjct: 187 FDSTPNL---EILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNAL-VGLDS-L 241
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNI-VLSFNQIK 376
+ + +N L + + L + L+ N + I+ FKN+ + + + + ++
Sbjct: 242 ESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELV 301
Query: 377 YIYPNAFVNLPNLVKLDLQDN-KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ A NLP L KL+ +N KL + F ++ + ++ M L+NN + +Y+ +
Sbjct: 302 SVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLM---LNNNALNAVYQKTVE 358
Query: 436 QAPIYIKSLDLSNNRIQ-EVPVNFLQTFADSLR 467
P ++ + + +N ++ + ++++ + ++R
Sbjct: 359 SLP-NLREISIHSNPLRCDCVIHWINSNKTNIR 390
Score = 132 (51.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 51/192 (26%), Positives = 89/192 (46%)
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL---NLSNNYITNLYENDKKQAPIYIK 442
+P+ + D Q L+ N N+ + Q NL + S N TN+ E +
Sbjct: 66 IPSNLSSDTQVLLLQS-N-NIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLT-QLT 122
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+L L N+I E+ LQ ++ L++LY++ N+I + A AF L L L L N + V
Sbjct: 123 TLHLEENQITEMNDYCLQDLSN-LQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKV 181
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
+ R F PNL+I+ + N + + F LR L ++ L +P + ++
Sbjct: 182 IDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVG--LD 239
Query: 563 KLD-ISYNQDKI 573
L+ +S+ +K+
Sbjct: 240 SLESLSFYDNKL 251
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 239 (89.2 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 72/261 (27%), Positives = 132/261 (50%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+NL+ + L++ N++ + + L L ++ L++N I + N F + +R+KE+
Sbjct: 62 RNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQ-KL-RRVKELT 119
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS+N + + ++TF + L ++ LSYN L+S++ F L + + + N IK++
Sbjct: 120 LSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVR 179
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F + +L LD+ N+LK N F+ + K T ++L ++ NL + I +
Sbjct: 180 IFQDCRSLKFLDIGYNQLKSLARNSFAGLF-KLTELHLEHNDLVKVNLAHFPRL---ISL 235
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
SL L N++ V VN L + L KL L NEI++++ F ++ L+ L L+ N +
Sbjct: 236 HSLCLRRNKVTIV-VNTLD-WIWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLT 293
Query: 502 VVVKRTFIGMPNLQIIDLSFN 522
+ R +L I LS N
Sbjct: 294 YIDSRILDSWKSLTSISLSAN 314
Score = 195 (73.7 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 62/262 (23%), Positives = 128/262 (48%)
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL 346
NL+ + ++L YN +S++H+ F +L + L +N++ +E + F L+ + +TL
Sbjct: 63 NLSGMMGLSLRYNSLSELHDG--QFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTL 120
Query: 347 SYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
S N + + +F+ + N+ ++ LS+N ++ + P+ F L L L ++ N +K + +
Sbjct: 121 SSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRI 180
Query: 407 FSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADS 465
F + S + L++ N + +L N A ++ + L L +N + +V + S
Sbjct: 181 FQDCRSLKF---LDIGYNQLKSLARNSF--AGLFKLTELHLEHNDLVKVNLAHFPRLI-S 234
Query: 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
L L L N++ + + LE L L N I + F +P+L+ + L N ++
Sbjct: 235 LHSLCLRRNKVT-IVVNTLDWIWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLT 293
Query: 526 MLTGEQFYFSFK-LRILNISHN 546
+ + S+K L +++S N
Sbjct: 294 YIDS-RILDSWKSLTSISLSAN 314
Score = 192 (72.6 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 65/227 (28%), Positives = 116/227 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I + GN F+ L ++EL+LS NK I +L +N F L+ +++S++ S E P
Sbjct: 99 NHICSVEGNAFQKLRRVKELTLSSNK--ITQLPNNTFRPMPNLRSVDLSYNNLQSLE-PD 155
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L L L L M +N IK + + SL ++++ YN++ + N F + K L
Sbjct: 156 --LFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA-GLFK-L 211
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
E+ L +N L + F L L+++ L N + +I + + + + LS N+I+Y
Sbjct: 212 TELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKV-TIVVNTLDWIWQLEKLDLSGNEIEY 270
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
I P+ F ++P+L L L N+L + + + S ++ +++LS N
Sbjct: 271 IEPHVFESVPHLKSLQLDSNRLTYIDSRI---LDSWKSLTSISLSAN 314
Score = 187 (70.9 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 61/231 (26%), Positives = 107/231 (46%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N L + F L +L + L +N + S++ +F+ L + + LS N+I +
Sbjct: 70 LSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLP 129
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAP 438
N F +PNL +DL N L+ ++F + T M N ++++ +
Sbjct: 130 NNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRS--- 186
Query: 439 IYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+K LD+ N+++ + N F F L +L+L+ N++ ++ F L L L L
Sbjct: 187 --LKFLDIGYNQLKSLARNSFAGLF--KLTELHLEHNDLVKVNLAHFPRLISLHSLCLRR 242
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
N + +VV T + L+ +DLS NEI + F L+ L + NRL
Sbjct: 243 NKVTIVVN-TLDWIWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNRL 292
Score = 178 (67.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 61/235 (25%), Positives = 112/235 (47%)
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
NL + ++L YN L + F L + + L N I + NAF L + +L L
Sbjct: 63 NLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSS 122
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
NK+ N F + + ++ ++LS N + +L E D + +L + +N I+ VPV
Sbjct: 123 NKITQLPNNTFRPMPNLRS---VDLSYNNLQSL-EPDLFHGLRKLTTLHMRSNAIKFVPV 178
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
Q SL+ L + +N++K L +F L L L LEHN++ V F + +L
Sbjct: 179 RIFQD-CRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHS 237
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
+ L N+++++ + ++L L++S N + + VF + ++ L + N+
Sbjct: 238 LCLRRNKVTIVVNTLDWI-WQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNR 291
Score = 173 (66.0 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 56/226 (24%), Positives = 102/226 (45%)
Query: 352 KSIKTTSF-KNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNI 410
+S+ T +NL+ M+ + L +N + ++ F L L L L N + N F +
Sbjct: 53 ESLNLTEMPRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKL 112
Query: 411 TSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
+ L LS+N IT L N + P ++S+DLS N +Q + + L L+
Sbjct: 113 RRVK---ELTLSSNKITQLPNNTFRPMP-NLRSVDLSYNNLQSLEPDLFHGLR-KLTTLH 167
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
+ N IK + F + L+ L + +N + + + +F G+ L + L N++ +
Sbjct: 168 MRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLA 227
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ-DKIRP 575
F L L + N++ + + +EKLD+S N+ + I P
Sbjct: 228 HFPRLISLHSLCLRRNKVTIVVNTLDWIWQLEKLDLSGNEIEYIEP 273
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 54/203 (26%), Positives = 89/203 (43%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
NKIT L N FR + ++ + NN + D R N I + +F
Sbjct: 123 NKITQLPNNTFRPMP-NLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIF 181
Query: 209 RHLYNLQELSLSFNKLQIIELNS--NVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNT 266
+ +L+ L + +N+L+ + NS +F + E L L N FP I +
Sbjct: 182 QDCRSLKFLDIGYNQLKSLARNSFAGLFKLTE-LHLEHNDLVKVNLAHFPRLI------S 234
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L L + N + + N +L + L ++L N+I I ++F H LK ++L +N
Sbjct: 235 LHSLCLRRNKVTIVVN-TLDWIWQLEKLDLSGNEIEYIEPHVFESVPH--LKSLQLDSNR 291
Query: 327 LELIESDTFYNLKELNTITLSYN 349
L I+S + K L +I+LS N
Sbjct: 292 LTYIDSRILDSWKSLTSISLSAN 314
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 240 (89.5 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 76/273 (27%), Positives = 141/273 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ N+I+ +++ L L ++ L++N IS + + F I +RLKE+ LS+N +
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQ-GI-RRLKELILSSNKITY 123
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ + TF+ + L + LSYN L+++++ FK L ++ + L N +K + F + NL
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSN 448
LDL N+L+ + N F+ + + L+L +N + + N ++ ++S+ L
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLK---ELHLEHNQFSKI--NFAHFPRLFNLRSIYLQW 238
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
NRI+ + T++ SL L L N+I+ ++ F L L+ L+L+ N + + + T
Sbjct: 239 NRIRSISQGLTWTWS-SLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETV 297
Query: 509 IGMPNLQIIDLSFN--EISMLTGEQFYF--SFK 537
+L I LS N E S FY+ +FK
Sbjct: 298 NAWISLISITLSGNMWECSRSICPLFYWLKNFK 330
Score = 228 (85.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 66/254 (25%), Positives = 126/254 (49%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +N I K+ +N F +++ L + L +NY+ ++ D F ++ L + LS N +
Sbjct: 66 LSLRFNSIQKLKSNQFA-GLNQ-LIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ +F + N+ N+ LS+N+++ + F L L+ L L+ N LK + VF + +
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLD 472
L+L N + +L N + +K L L +N+ ++ +F + F +LR +YL
Sbjct: 184 DF---LDLGYNRLRSLSRN-AFAGLLKLKELHLEHNQFSKINFAHFPRLF--NLRSIYLQ 237
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
+N I+ + L L L N+I + TF +PNLQ ++L N+++ ++ E
Sbjct: 238 WNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETV 297
Query: 533 YFSFKLRILNISHN 546
L + +S N
Sbjct: 298 NAWISLISITLSGN 311
Score = 212 (79.7 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 67/252 (26%), Positives = 123/252 (48%)
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN 287
++ N+ + L L S SN+F LN L WL +D+N I ++ +
Sbjct: 54 DIPENISGGSQGLSLRFNSIQKLKSNQFA------GLNQLIWLYLDHNYISSVDEDAFQG 107
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
+ L + L NKI+ +HN FH + L+ + LS N L+ ++S+ F L++L + L
Sbjct: 108 IRRLKELILSSNKITYLHNKTFH-PV-PNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLR 165
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N LK++ F++ N+ + L +N+++ + NAF L L +L L+ N+ N F
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 408 SNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
+ + ++ + L N I ++ + + +LDLS N IQ + + + L+
Sbjct: 226 PRLFNLRS---IYLQWNRIRSISQG-LTWTWSSLHNLDLSGNDIQGIEPGTFKCLPN-LQ 280
Query: 468 KLYLDFNEIKHL 479
KL LD N++ ++
Sbjct: 281 KLNLDSNKLTNI 292
Score = 192 (72.6 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 64/259 (24%), Positives = 124/259 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI + + L N ++ ++S+ F L +L + L +N + S+ +F+ + + ++LS
Sbjct: 58 NISGGSQGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILS 117
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT---N 428
N+I Y++ F +PNL LDL NKL+ F + K ++L SN+ T
Sbjct: 118 SNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLR-KLIILHLR-SNSLKTVPIR 175
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLD 488
++++ + + LDL NR++ + N L++L+L+ N+ ++ F L
Sbjct: 176 VFQDCRN-----LDFLDLGYNRLRSLSRNAFAGLL-KLKELHLEHNQFSKINFAHFPRLF 229
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L + L+ N I + + +L +DLS N+I + F L+ LN+ N+L
Sbjct: 230 NLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKL 289
Query: 549 RSLPRDVFSNTIIEKLDIS 567
++ ++ N I + I+
Sbjct: 290 TNISQETV-NAWISLISIT 307
Score = 185 (70.2 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 62/240 (25%), Positives = 115/240 (47%)
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
Q LSL FN +Q +L SN F +L L + + +S + + + + L+ L + +
Sbjct: 64 QGLSLRFNSIQ--KLKSNQFAGLNQLIWLYLDHNYISSVDEDAF---QGIRRLKELILSS 118
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N I + N + + + +L ++L YNK+ + + F + K L + L +N L+ +
Sbjct: 119 NKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-GLRK-LIILHLRSNSLKTVPIRV 176
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
F + + L+ + L YN L+S+ +F L + + L NQ I F L NL + L
Sbjct: 177 FQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYL 236
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
Q N+++ + + +S NL+LS N I + K P ++ L+L +N++ +
Sbjct: 237 QWNRIRSISQGLTWTWSSLH---NLDLSGNDIQGIEPGTFKCLP-NLQKLNLDSNKLTNI 292
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 66/252 (26%), Positives = 113/252 (44%)
Query: 147 RCNKITDLNGNLFRHLQKSI-VKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG 205
R N I L N F L + I + N ++ D+ D + NKIT L+
Sbjct: 69 RFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDE--DAFQGIRRLKELILSSNKITYLHN 126
Query: 206 NLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
F + NL+ L LS+NKLQ ++ S F KL +L + + + P + ++
Sbjct: 127 KTFHPVPNLRNLDLSYNKLQTLQ--SEQFKGLRKLIILHLRSNSLKT--VPIRVF-QDCR 181
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
L++L + N ++++ + L L ++LE+N+ SKI N HF L+ I L N
Sbjct: 182 NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKI--NFAHFPRLFNLRSIYLQWN 239
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
+ I + L+ + LS N ++ I+ +FK L N+ + L N++ I
Sbjct: 240 RIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNA 299
Query: 386 LPNLVKLDLQDN 397
+L+ + L N
Sbjct: 300 WISLISITLSGN 311
Score = 174 (66.3 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 47/130 (36%), Positives = 72/130 (55%)
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+ L L N IQ++ N + L LYLD N I +D AF + L+ L L N I
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGL-NQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKIT 122
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI- 560
+ +TF +PNL+ +DLS+N++ L EQF KL IL++ N L+++P VF +
Sbjct: 123 YLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRN 182
Query: 561 IEKLDISYNQ 570
++ LD+ YN+
Sbjct: 183 LDFLDLGYNR 192
>RGD|1310957 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10116 "Rattus norvegicus" [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISO]
[GO:0021756 "striatum development" evidence=ISO] [GO:0030534 "adult
behavior" evidence=ISO] [GO:0043588 "skin development"
evidence=ISO] [GO:0048813 "dendrite morphogenesis" evidence=ISO]
[GO:0072358 "cardiovascular system development" evidence=ISO]
REFSEQ:NM_001107284 Ncbi:NP_001100754
Length = 958
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNE 475
+ ++ N I +L E + PIY L LS N + + P F+ S+ L+L N
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIY--HLLLSGNLLNRLYPNEFVNYTGASI--LHLGSNV 116
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
I+ ++ AF L L L L +N + ++ TF+G+ NL+ + + +N IS++ F
Sbjct: 117 IQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKL 176
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
L++L ++ N L LP ++F + LD+ N+ K+ P
Sbjct: 177 HMLQVLILNDNLLSGLPNNLFRFVPLTHLDLRGNRLKLLP 216
Score = 154 (59.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N + + N T + ++L N I I FH + + L+ + L+NN LEL
Sbjct: 86 LLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFH-GL-RGLRRLHLNNNKLEL 143
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + + YN + I+ +F L+ + ++L+ N + + N F +P L
Sbjct: 144 LRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLSGLPNNLFRFVP-L 202
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 203 THLDLRGNRLK 213
Score = 145 (56.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 51/211 (24%), Positives = 105/211 (49%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N I +R T L+ ++L N+IS I + F ++ L+ + L+ N +E +
Sbjct: 416 LTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFG-DLGN-LRRLYLNGNRIERLS 473
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
+ FY L+ L + L YNL++ I++ +F + N+ + L+ NQ++ + F L L++
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNQLQAMPSGVFSGL-TLLR 532
Query: 392 LDLQDNKLKDFNLN-VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLD---LS 447
L+L+ N ++ V +TS + ++L +N E + ++I+ L L
Sbjct: 533 LNLRSNSFTSLPVSGVLDQLTSL---IQIDLHDNPWDCTCEVVGMK--LWIEQLKVGVLV 587
Query: 448 NNRIQEVPVNFLQTFADSLRKLYL--DFNEI 476
+ I + P F +T+ S++ L D++++
Sbjct: 588 DEVICKAPKKFAETYMRSIKSELLCPDYSDV 618
Score = 142 (55.0 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 47/162 (29%), Positives = 78/162 (48%)
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLR 467
N+ +N+N I ++ E K P K + L+ N I V +FL+ A L
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPK--PYNPKKMYLTENYITVVRRTDFLE--ATGLD 436
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L+L N I + AFG+L L L L N I + F G+ +LQ + L +N I +
Sbjct: 437 LLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREI 496
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N+L+++P VFS + +L++ N
Sbjct: 497 QSGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLLRLNLRSN 538
Score = 131 (51.2 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 42/154 (27%), Positives = 75/154 (48%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N L + + F N + + L N+++ I+T +F L + + L+ N+++ + +
Sbjct: 88 LSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDD 147
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F+ L NL L + N + N F + Q L L++N ++ L N + P+
Sbjct: 148 TFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQV---LILNDNLLSGLPNNLFRFVPL-- 202
Query: 442 KSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFN 474
LDL NR++ +P V LQ D + +L L+ N
Sbjct: 203 THLDLRGNRLKLLPYVGLLQHM-DKVVELQLEEN 235
Score = 124 (48.7 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 34/115 (29%), Positives = 60/115 (52%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N +++++ N F N + + L +N ++ IE+ F+ L+ L + L+ N L+
Sbjct: 85 HLLLSGNLLNRLYPNEF-VN-YTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F L N+ + + +N I I PNAF L L L L DN L N+F
Sbjct: 143 LLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLSGLPNNLF 197
Score = 104 (41.7 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 50/188 (26%), Positives = 85/188 (45%)
Query: 197 CN-KITDLNGNLF---RHLYNLQELSLS-FNKLQIIELNSNVFDVFEKLQLLEIS-FSLF 250
CN +I+DL N+ R + ++ EL +N ++ L N V + LE + L
Sbjct: 380 CNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMY-LTENYITVVRRTDFLEATGLDLL 438
Query: 251 N-SNEFPYYILNK---NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN 306
+ N I ++ +L L L ++ N I+ + Y L SL Y+ L+YN I +I +
Sbjct: 439 HLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQS 498
Query: 307 NLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNM 365
F + L+ + L+NN L+ + S F L L + L N S+ + L ++
Sbjct: 499 GTF--DPVPNLQLLFLNNNQLQAMPSGVFSGLTLLR-LNLRSNSFTSLPVSGVLDQLTSL 555
Query: 366 LNIVLSFN 373
+ I L N
Sbjct: 556 IQIDLHDN 563
Score = 94 (38.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/163 (23%), Positives = 75/163 (46%)
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
+ + L LS N L L N F + +L + ++ E + L L L
Sbjct: 81 FPIYHLLLSGNLLN--RLYPNEFVNYTGASILHLGSNVIQDIETGAF---HGLRGLRRLH 135
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
++NN ++ +R+ + L +L Y+ ++YN IS I N F +H L+ + L++N L +
Sbjct: 136 LNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFG-KLHM-LQVLILNDNLLSGLP 193
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSF-KNLNNMLNIVLSFN 373
++ F L + L N LK + ++++ ++ + L N
Sbjct: 194 NNLF-RFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN 235
Score = 88 (36.0 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 28/104 (26%), Positives = 54/104 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I D+ F L L+ L L+ NKL++ L + F E L+ L++ ++ + E P
Sbjct: 115 NVIQDIETGAFHGLRGLRRLHLNNNKLEL--LRDDTFLGLENLEYLQVDYNYISVIE-PN 171
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
K L+ L+ L +++N + + N +L+ L +++L N++
Sbjct: 172 -AFGK-LHMLQVLILNDNLLSGLPN-NLFRFVPLTHLDLRGNRL 212
Score = 68 (29.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 18 LYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKI 77
L+ N KL+ +L+ D G+ N L L++ + I+P+AF + + L + I
Sbjct: 134 LHLNNNKLE-----LLRDDTFLGLEN--LEYLQVDYNYISVIEPNAFGKL---HMLQVLI 183
Query: 78 TNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATLYSNVTKLQHL 126
N + L SGL + + +T LDL N+L +L L ++ K+ L
Sbjct: 184 LN---DNLLSGLPNNLFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVEL 230
Score = 57 (25.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 30/137 (21%), Positives = 61/137 (44%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L +S +++++ + + HL +L G+ L ++ ++ + TG + + +
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIYHL---LLSGNLLNRLYPNEF--VNYTGASILHLGSN 115
Query: 63 AFDNID--ACYDLT----LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL 116
+I+ A + L L + N ++E L F +EN+E + +D +N +SV+
Sbjct: 116 VIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVD--YNYISVIEPNAF 173
Query: 117 YSNVTKLQHLGTTILKD 133
KL L IL D
Sbjct: 174 ----GKLHMLQVLILND 186
Score = 50 (22.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 23/106 (21%), Positives = 45/106 (42%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L + +N +SV+ KL L IL + L G+ N+ R + +T DL+
Sbjct: 158 LQVDYNYISVIEPNAF----GKLHMLQVLILNDNLLSGLPNNLFRFVPLTHLDLRGNRLK 213
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
+ + K+ Q+EE P ++ +++ +S++ L
Sbjct: 214 LLPYVGLLQHMD-KVVELQLEENPWNCSCELISLKDWLDSISYSAL 258
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 238 (88.8 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 70/254 (27%), Positives = 125/254 (49%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +N I+++ + F +L + L +N + ++ D F L +L + LS N +
Sbjct: 66 LSLRHNHITELERD--QFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFY 123
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ T+F L N+ N+ LSFNQ+ ++P F L L L L+ N L+ + +F + S
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSL 183
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLD 472
+ L+LS N + +L N I ++ L L +N++ ++ +FL+ SL L+L
Sbjct: 184 EF---LDLSTNRLRSLARNGFAGL-IKLRELHLEHNQLTKINFAHFLRL--SSLHTLFLQ 237
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
+N+I +L LE L L N I + F MPNL+I+ + N+++ L +
Sbjct: 238 WNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKIL 297
Query: 533 YFSFKLRILNISHN 546
L + +S N
Sbjct: 298 NSLRSLTTVGLSGN 311
Score = 213 (80.0 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 64/239 (26%), Positives = 117/239 (48%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L +N++ +E D F + +L + L +N + ++K +F+ L + ++LS N+I Y+
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
F L NL LDL N+L + +F + QT L+L +N + +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQT---LHLRSNSLRTIPVRLFWDCRS 182
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ LDLS NR++ + N LR+L+L+ N++ ++ F L L L L+ N
Sbjct: 183 -LEFLDLSTNRLRSLARNGFAGLI-KLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 240
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
I+ + L+ +DL+ NEI + F L+IL + +N+L SL + ++
Sbjct: 241 ISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNS 299
Score = 175 (66.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 76/280 (27%), Positives = 127/280 (45%)
Query: 196 RCNKIT---DLNGNLFRHLYNLQE---LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL 249
RC K+ D G F + N + L LS I EL + F F +L L + +
Sbjct: 39 RCEKLLFYCDSQG--FHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQ 96
Query: 250 FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
++ + + + L L+ L + +N I + N + L +L ++L +N++S +H LF
Sbjct: 97 ISTVKEDAF---QGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELF 153
Query: 310 HFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ + K L+ + L +N L I F++ + L + LS N L+S+ F L + +
Sbjct: 154 -YGLRK-LQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELH 211
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L NQ+ I F+ L +L L LQ NK+ NL T T L+L+ N I +
Sbjct: 212 LEHNQLTKINFAHFLRLSSLHTLFLQWNKIS--NLTCGMEWTWG-TLEKLDLTGNEIKAI 268
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
+ P +K L + NN++ + L +SLR L
Sbjct: 269 DLTVFETMP-NLKILLMDNNKLNSLDSKIL----NSLRSL 303
Score = 170 (64.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 48/128 (37%), Positives = 72/128 (56%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L +N I E+ + +F+ L L+LD N+I + AF L L+ L L N I +
Sbjct: 66 LSLRHNHITELERDQFASFSQ-LTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYL 124
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIE 562
TF + NLQ +DLSFN++S L E FY KL+ L++ N LR++P +F + +E
Sbjct: 125 PNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLE 184
Query: 563 KLDISYNQ 570
LD+S N+
Sbjct: 185 FLDLSTNR 192
Score = 157 (60.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 54/180 (30%), Positives = 87/180 (48%)
Query: 377 YIYPNAFVNLPNLVK-----LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
Y F ++PN L L+ N + + + F++ S+ T L+L +N I+ + E
Sbjct: 46 YCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASF-SQLTW--LHLDHNQISTVKE 102
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
D Q +K L LS+N+I +P N T +L+ L L FN++ L F L L+
Sbjct: 103 -DAFQGLYKLKELILSSNKIFYLP-NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQ 160
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N++ + R F +L+ +DLS N + L F KLR L++ HN+L +
Sbjct: 161 TLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKI 220
>MGI|MGI:2679448 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0007625 "grooming
behavior" evidence=IMP] [GO:0009410 "response to xenobiotic
stimulus" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0021756
"striatum development" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0043588 "skin development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0072358
"cardiovascular system development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2679448 GO:GO:0016021
GO:GO:0043588 GO:GO:0007268 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048813 GO:GO:0007409
GO:GO:0030534 GO:GO:0009410 InterPro:IPR000372 SMART:SM00013
GO:GO:0007625 GO:GO:0021756 GO:GO:0072358 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 eggNOG:NOG147171
CTD:26050 OMA:HHRGPAL OrthoDB:EOG4X97GH EMBL:AB097574 EMBL:BC065107
EMBL:AK011457 IPI:IPI00329844 IPI:IPI00410889 RefSeq:NP_942565.1
UniGene:Mm.235097 UniGene:Mm.417152 ProteinModelPortal:Q810B7
SMR:Q810B7 STRING:Q810B7 PhosphoSite:Q810B7 PRIDE:Q810B7
Ensembl:ENSMUST00000042767 GeneID:75409 KEGG:mmu:75409
UCSC:uc011zpr.1 InParanoid:Q810B7 NextBio:342932 Bgee:Q810B7
CleanEx:MM_SLITRK5 Genevestigator:Q810B7
GermOnline:ENSMUSG00000033214 Uniprot:Q810B7
Length = 957
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNE 475
+ ++ N I +L E + PIY L LS N + + P F+ S+ L+L N
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIY--HLLLSGNLLSRLYPNEFVNYTGASI--LHLGSNV 116
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
I+ ++ AF L L L L +N + ++ TF+G+ NL+ + + +N IS++ F
Sbjct: 117 IQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKL 176
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
L++L ++ N L LP ++F + LD+ N+ K+ P
Sbjct: 177 HMLQVLILNDNLLSGLPNNLFRFVPLTHLDLRGNRLKLLP 216
Score = 154 (59.3 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N + + N T + ++L N I I FH + + L+ + L+NN LEL
Sbjct: 86 LLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFH-GL-RGLRRLHLNNNKLEL 143
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + + YN + I+ +F L+ + ++L+ N + + N F +P L
Sbjct: 144 LRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLSGLPNNLFRFVP-L 202
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 203 THLDLRGNRLK 213
Score = 144 (55.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 51/211 (24%), Positives = 103/211 (48%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N I +R T L+ ++L N+IS I + F ++ L+ + L+ N +E +
Sbjct: 416 LTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFG-DLGN-LRRLYLNGNRIERLS 473
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
+ FY L+ L + L YNL++ I+ +F + N+ + L+ NQ++ + F L L++
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGL-TLLR 532
Query: 392 LDLQDNKLKDFNLN-VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLD---LS 447
L+L+ N ++ V +TS + ++L +N D ++I+ L L
Sbjct: 533 LNLRGNSFTSLPVSGVLDQLTSL---IQIDLHDNPWDCTC--DVVGMKLWIEQLKVGVLV 587
Query: 448 NNRIQEVPVNFLQTFADSLRKLYL--DFNEI 476
+ I + P F +T+ S++ L D++++
Sbjct: 588 DEVICKAPKKFAETYMRSIKSELLCPDYSDV 618
Score = 141 (54.7 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 47/162 (29%), Positives = 78/162 (48%)
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLR 467
N+ +N+N I ++ E K P K + L+ N I V +FL+ A L
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPK--PYNPKKMYLTENYITVVRRTDFLE--ATGLD 436
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L+L N I + AFG+L L L L N I + F G+ +LQ + L +N I +
Sbjct: 437 LLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREI 496
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N+L+++P VFS + +L++ N
Sbjct: 497 QAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLLRLNLRGN 538
Score = 131 (51.2 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 42/154 (27%), Positives = 75/154 (48%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N L + + F N + + L N+++ I+T +F L + + L+ N+++ + +
Sbjct: 88 LSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDD 147
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F+ L NL L + N + N F + Q L L++N ++ L N + P+
Sbjct: 148 TFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQV---LILNDNLLSGLPNNLFRFVPL-- 202
Query: 442 KSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFN 474
LDL NR++ +P V LQ D + +L L+ N
Sbjct: 203 THLDLRGNRLKLLPYVGLLQHM-DKVVELQLEEN 235
Score = 127 (49.8 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 35/115 (30%), Positives = 60/115 (52%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N +S+++ N F N + + L +N ++ IE+ F+ L+ L + L+ N L+
Sbjct: 85 HLLLSGNLLSRLYPNEF-VN-YTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F L N+ + + +N I I PNAF L L L L DN L N+F
Sbjct: 143 LLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLSGLPNNLF 197
Score = 94 (38.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 39/163 (23%), Positives = 75/163 (46%)
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
+ + L LS N L L N F + +L + ++ E + L L L
Sbjct: 81 FPIYHLLLSGNLLS--RLYPNEFVNYTGASILHLGSNVIQDIETGAF---HGLRGLRRLH 135
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
++NN ++ +R+ + L +L Y+ ++YN IS I N F +H L+ + L++N L +
Sbjct: 136 LNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFG-KLHM-LQVLILNDNLLSGLP 193
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSF-KNLNNMLNIVLSFN 373
++ F L + L N LK + ++++ ++ + L N
Sbjct: 194 NNLF-RFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN 235
Score = 88 (36.0 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 28/104 (26%), Positives = 54/104 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I D+ F L L+ L L+ NKL++ L + F E L+ L++ ++ + E P
Sbjct: 115 NVIQDIETGAFHGLRGLRRLHLNNNKLEL--LRDDTFLGLENLEYLQVDYNYISVIE-PN 171
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
K L+ L+ L +++N + + N +L+ L +++L N++
Sbjct: 172 -AFGK-LHMLQVLILNDNLLSGLPN-NLFRFVPLTHLDLRGNRL 212
Score = 68 (29.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 18 LYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKI 77
L+ N KL+ +L+ D G+ N L L++ + I+P+AF + + L + I
Sbjct: 134 LHLNNNKLE-----LLRDDTFLGLEN--LEYLQVDYNYISVIEPNAFGKL---HMLQVLI 183
Query: 78 TNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATLYSNVTKLQHL 126
N + L SGL + + +T LDL N+L +L L ++ K+ L
Sbjct: 184 LN---DNLLSGLPNNLFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVEL 230
Score = 57 (25.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 30/137 (21%), Positives = 61/137 (44%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L +S +++++ + + HL +L G+ L ++ ++ + TG + + +
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIYHL---LLSGNLLSRLYPNEF--VNYTGASILHLGSN 115
Query: 63 AFDNID--ACYDLT----LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL 116
+I+ A + L L + N ++E L F +EN+E + +D +N +SV+
Sbjct: 116 VIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVD--YNYISVIEPNAF 173
Query: 117 YSNVTKLQHLGTTILKD 133
KL L IL D
Sbjct: 174 ----GKLHMLQVLILND 186
Score = 50 (22.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 23/106 (21%), Positives = 45/106 (42%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L + +N +SV+ KL L IL + L G+ N+ R + +T DL+
Sbjct: 158 LQVDYNYISVIEPNAF----GKLHMLQVLILNDNLLSGLPNNLFRFVPLTHLDLRGNRLK 213
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
+ + K+ Q+EE P ++ +++ +S++ L
Sbjct: 214 LLPYVGLLQHMD-KVVELQLEENPWNCSCELISLKDWLDSISYSAL 258
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 243 (90.6 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 97/360 (26%), Positives = 167/360 (46%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYI-LNKNLNTLEWLAMDNN 275
L LS N+L I+ +S + LQ +++ N+NE L + L++ N
Sbjct: 79 LDLSHNRLSFIQTSS--LSHLQSLQEVKL-----NNNELETIPNLGSISANIRQLSLAGN 131
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
I I L SL ++L N IS++ +LK + ++NN + +E F
Sbjct: 132 AIDKILPEQLEAFQSLETLDLSNNNISELRTAFPPL----QLKYLYINNNRVSSMEPGYF 187
Query: 336 YNLKE-LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
NL L + L+ N + +I FK L + ++ L+ N+IK + F L L L +
Sbjct: 188 DNLASTLLVLKLNRNRISAIPPKMFK-LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKM 246
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
Q N + F +++ + L L +N +T + + + ++ L LS N I +
Sbjct: 247 QRNGVTKLMDGAFWGLSNMEV---LQLDHNNLTEITKG-WLYGLLMLRELHLSQNAINRI 302
Query: 455 PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNL 514
+ + F L +L L FN + LD ++F L +L L + +N ++ + F G+ +L
Sbjct: 303 SPDAWE-FCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSL 361
Query: 515 QIIDLSFNEISMLTGEQFYFSF----KLRILNISHNRLRSLPRDVFSNT-IIEKLDISYN 569
+ +DL NEIS T E +F +LR L + NR+RS+ + F+ +E LD+S N
Sbjct: 362 KTLDLRNNEISW-TIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGN 420
Score = 221 (82.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 96/375 (25%), Positives = 174/375 (46%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N+++LSL+ N + I L + + F+ L+ L++S N+N L L++L +
Sbjct: 122 NIRQLSLAGNAIDKI-LPEQL-EAFQSLETLDLS----NNNISELRTAFPPLQ-LKYLYI 174
Query: 273 DNNNIKNIRNYSLYNLTS-LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+NN + ++ NL S L + L N+IS I +F +L+ + L+ N ++ ++
Sbjct: 175 NNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFKL---PQLQHLELNRNKIKNVD 231
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
TF L L ++ + N + + +F L+NM + L N + I L L +
Sbjct: 232 GLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRE 291
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI 451
L L N + + + + Q L+L+ N+++ L ++ + + +L + NN++
Sbjct: 292 LHLSQNAINRISPDAWEFC---QKLSELDLTFNHLSRLDDSSFLGLSL-LNALHIGNNKV 347
Query: 452 QEVPVNFLQTFADSLRKLYLDFNEIKHL--DAT-AFGNLDVLELLSLEHNNIAVVVKRTF 508
+ + SL+ L L NEI D + AF LD L L L+ N I + K+ F
Sbjct: 348 SYIADCAFRGLT-SLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAF 406
Query: 509 IGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN------RLRSLPRDVFSNTIIE 562
G+ L+ +DLS N I L F KL+ L+++ + +LR LP+ V N
Sbjct: 407 AGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLLCDCQLRWLPQWVAENNFQS 466
Query: 563 KLDISYNQDKIRPGR 577
++ S ++ GR
Sbjct: 467 FVNASCAHPQLLKGR 481
Score = 197 (74.4 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 89/384 (23%), Positives = 174/384 (45%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQH--LGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
LDLSHN+LS + ++L S++ LQ L L+ G ++ +R+L + G + I
Sbjct: 79 LDLSHNRLSFIQTSSL-SHLQSLQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKIL 137
Query: 61 PSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL------NM 113
P + ++A L TL ++N I EL + ++ L +++N++S + N+
Sbjct: 138 P---EQLEAFQSLETLDLSNNNISELRTAF----PPLQLKYLYINNNRVSSMEPGYFDNL 190
Query: 114 ATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNN 173
A+ V KL + + + NKI +++G F+ L +K+ K
Sbjct: 191 ASTLL-VLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGL--GALKSLKMQ 247
Query: 174 NNNEDQVSDREK-XXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232
N ++ D N +T++ L L+EL LS N + ++ +
Sbjct: 248 RNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAIN--RISPD 305
Query: 233 VFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN 292
++ +KL L+++F+ + + ++ L+ L L + NN + I + + LTSL
Sbjct: 306 AWEFCQKLSELDLTFNHLSRLDDSSFL---GLSLLNALHIGNNKVSYIADCAFRGLTSLK 362
Query: 293 YINLEYNKIS-KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
++L N+IS I + F+ RL+++ L N + I F L L + LS N +
Sbjct: 363 TLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAI 422
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQI 375
S+++ +F + + + L+ + +
Sbjct: 423 MSLQSNAFSQMKKLQQLHLNTSSL 446
Score = 191 (72.3 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 87/385 (22%), Positives = 177/385 (45%)
Query: 101 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFR 160
LDLSHN+LS + ++L + LQ L L + E + L GN
Sbjct: 79 LDLSHNRLSFIQTSSL----SHLQSLQEVKLNNNELETIPNLGSISANIRQLSLAGNAID 134
Query: 161 HLQKSIVKAKKN------NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNL 214
+ ++A ++ +NNN ++ N+++ + F +L +
Sbjct: 135 KILPEQLEAFQSLETLDLSNNNISELRTAFPPLQLKYLYINN-NRVSSMEPGYFDNLAST 193
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
L L N+ +I + +F + +LQ LE++ + + + + + L L+ L M
Sbjct: 194 L-LVLKLNRNRISAIPPKMFKL-PQLQHLELNRNKIKNVDGLTF---QGLGALKSLKMQR 248
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N + + + + + L+++ + L++N +++I + + L+E+ LS N + I D
Sbjct: 249 NGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLL--MLRELHLSQNAINRISPDA 306
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQIKYIYPNAFVNLPNLVKLD 393
+ ++L+ + L++N L + +SF L+ +LN + + N++ YI AF L +L LD
Sbjct: 307 WEFCQKLSELDLTFNHLSRLDDSSFLGLS-LLNALHIGNNKVSYIADCAFRGLTSLKTLD 365
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQAPI-YIKSLDLSNNRI 451
L++N++ + + S S + L L N I ++ + K A + ++ LDLS N I
Sbjct: 366 LRNNEIS-WTIEDMSGAFSGLDRLRQLILQGNRIRSITK--KAFAGLDTLEHLDLSGNAI 422
Query: 452 QEVPVNFLQTFADSLRKLYLDFNEI 476
+ N L++L+L+ + +
Sbjct: 423 MSLQSNAFSQMK-KLQQLHLNTSSL 446
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 240 (89.5 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 126/553 (22%), Positives = 238/553 (43%)
Query: 32 ILKGDQLQ-GIFNS--KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNT-----QIE 83
+L +L G+F KL EL I L+ + P+AF+ + + LTL+ N +
Sbjct: 75 LLHASELAPGLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTL 134
Query: 84 ELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXX 143
EL F ++ + + L L N + L ++ ++ LQ L T ++R +
Sbjct: 135 ELHGQSFQGLKELSE--LHLGDNNIRQLPEG-VWCSMPSLQLLNLT--QNRIRSAEFLGF 189
Query: 144 XXXRC--NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKIT 201
C + +++ NG + + + N + + N I+
Sbjct: 190 SEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQH-NNIS 248
Query: 202 DLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILN 261
L N L +L+ L++S+N L + L S F ++L+ L + + + E P +L+
Sbjct: 249 TLAPNALAGLSSLRVLNISYNHL--VSLPSEAFAGNKELRELHLQGN--DLYELPKGLLH 304
Query: 262 KNLNTLEWLAMDNNNIKN--IRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
+ L L L + N + + + N + L L +NL N +++I + F ++ +
Sbjct: 305 R-LEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILD 363
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+R NN + IE F L L+T+ L+ N L ++ F L + + L+ N + +
Sbjct: 364 MR--NNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVE 421
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
AF N +L +LDL N+L + V +++ +T L+L N I+ ++N+ +
Sbjct: 422 SQAFRNCSDLKELDLSSNQLTEVPEAV-QDLSMLKT---LDLGENQISE-FKNNTFRNLN 476
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ L L +NRI + V Q L L L N I+ ++ AF +E + L+ N
Sbjct: 477 QLTGLRLIDNRIGNITVGMFQDLP-RLSVLNLAKNRIQSIERGAFDKNTEIEAIRLD-KN 534
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR--DVFS 557
+ F + +L ++LS N + + + L+ L+I N + +L +
Sbjct: 535 FLTDINGIFATLASLLWLNLSENHLVWF--DYAFIPSNLKWLDIHGNYIEALGNYYKLQE 592
Query: 558 NTIIEKLDISYNQ 570
+ LD S+N+
Sbjct: 593 EIRVTTLDASHNR 605
Score = 220 (82.5 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 115/473 (24%), Positives = 210/473 (44%)
Query: 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL 103
S+L+ L+++ +L+ + P A+ TL + + I L + ++ L++
Sbjct: 210 SELQTLDVSFNELRSL-PDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLR--VLNI 266
Query: 104 SHNKLSVLNMATLYSNVTKLQ-HLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLF--R 160
S+N L L N + HL L + K + DL+GN
Sbjct: 267 SYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLL----VLDLSGNQLTSH 322
Query: 161 HLQKS----IVKAKKNN--NNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNLFRHLYN 213
H+ S +++ N NN ++ + K R N I + F LYN
Sbjct: 323 HVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYN 382
Query: 214 LQELSLSFNKLQIIELNSNVFD---VFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L L+L+ N+L L++ +F+ V KL L S+ S F +N + L+ L
Sbjct: 383 LHTLNLAENRLHT--LDNRIFNGLYVLTKLTLNNNLVSIVESQAF------RNCSDLKEL 434
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+ +N + + ++ +L+ L ++L N+IS+ NN F N+++ L +RL +N + I
Sbjct: 435 DLSSNQLTEVPE-AVQDLSMLKTLDLGENQISEFKNNTFR-NLNQ-LTGLRLIDNRIGNI 491
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
F +L L+ + L+ N ++SI+ +F + I L N + I F L +L+
Sbjct: 492 TVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDIN-GIFATLASLL 550
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
L+L +N L F+ ++ I S ++++ NYI L K Q I + +LD S+NR
Sbjct: 551 WLNLSENHLVWFD---YAFIPSNLKWLDIH--GNYIEALGNYYKLQEEIRVTTLDASHNR 605
Query: 451 IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
I E+ + +S+ L+++ N I + A F + L + L N ++ +
Sbjct: 606 ITEIGA---MSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKI 655
Score = 190 (71.9 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 122/491 (24%), Positives = 203/491 (41%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ-----HLGTTILKGDQLQGIFNSKLRELEITGKDL 56
TLD+S N+L L A S + +LQ H + L + L G+ S LR L I+ L
Sbjct: 214 TLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGL--SSLRVLNISYNHL 271
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMA-T 115
+ AF +L L+ + ELP GL ++E + + LDLS N+L+ ++ +
Sbjct: 272 VSLPSEAFAGNKELRELHLQ--GNDLYELPKGLLHRLEQL--LVLDLSGNQLTSHHVDNS 327
Query: 116 LYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNN-- 173
++ + +L L + + +I D+ N H+++ N
Sbjct: 328 TFAGLIRLIVLNLS--NNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHT 385
Query: 174 -NNNEDQVSDREKXXXXXXXXXXRC----NKITDLNGNLFRHLYNLQELSLSFNKLQIIE 228
N E+++ + + N ++ + FR+ +L+EL LS N+L +
Sbjct: 386 LNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVP 445
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
+ + L L E S F +N F +NLN L L + +N I NI +L
Sbjct: 446 EAVQDLSMLKTLDLGENQISEFKNNTF------RNLNQLTGLRLIDNRIGNITVGMFQDL 499
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
L+ +NL N+I I F N ++ IRL N+L I F L L + LS
Sbjct: 500 PRLSVLNLAKNRIQSIERGAFDKNTE--IEAIRLDKNFLTDING-IFATLASLLWLNLSE 556
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L +F N L + I Y A N L + +++ L D + N +
Sbjct: 557 NHLVWFDY-AFIPSN------LKWLDIHGNYIEALGNYYKLQE-EIRVTTL-DASHNRIT 607
Query: 409 NITSKQTPMNLNL---SNNYITNLYEN---DKKQAPIYIKSLDLSNNRIQEVPVNFLQTF 462
I + P ++ L +NN I + N DK + + +DL N + ++ +N L+
Sbjct: 608 EIGAMSVPNSIELLFINNNIIGQIQANTFVDKTR----LARVDLYANVLSKISLNALRVA 663
Query: 463 ADSLRKLYLDF 473
S K +F
Sbjct: 664 PVSAEKPVPEF 674
Score = 113 (44.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 74/373 (19%), Positives = 157/373 (42%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLREL------EITGK 54
+ LDLS N+L+ ++ S L L L + L I + +EL ++
Sbjct: 310 LVLDLSGNQLTSHHVDN--STFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNN 367
Query: 55 DLKFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNM 113
+ I+ AF + Y+L TL + ++ L + +F+ + + ++TL+ +N +S++
Sbjct: 368 SIGHIEEGAFLPL---YNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLN--NNLVSIVE- 421
Query: 114 ATLYSNVTKLQHLGT-----TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
+ + N + L+ L T + + + N+I++ N FR+L +
Sbjct: 422 SQAFRNCSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGL 481
Query: 169 AKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIE 228
+N V + + N+I + F ++ + L N L +
Sbjct: 482 RLIDNRIGNITVGMFQDLPRLSVLNLAK-NRIQSIERGAFDKNTEIEAIRLDKNFLT--D 538
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNY-SLYN 287
+N +F L L +S + + F Y + NL +WL + N I+ + NY L
Sbjct: 539 ING-IFATLASLLWLNLSEN--HLVWFDYAFIPSNL---KWLDIHGNYIEALGNYYKLQE 592
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
+ ++ +N+I++I ++ ++ + ++NN + I+++TF + L + L
Sbjct: 593 EIRVTTLDASHNRITEIGA----MSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLY 648
Query: 348 YNLLKSIKTTSFK 360
N+L I + +
Sbjct: 649 ANVLSKISLNALR 661
Score = 113 (44.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 93/447 (20%), Positives = 186/447 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQG--IFNS------KLRELEITGK 54
L L N L L L+ +L+ L L G+QL + NS +L L ++
Sbjct: 288 LHLQGNDLYELPKGLLH----RLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNN 343
Query: 55 DLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNM 113
L I F + Y L L + N I + G F + N+ TL+L+ N+L L+
Sbjct: 344 ALTRIGSKTFKEL---YFLQILDMRNNSIGHIEEGAFLPLYNLH--TLNLAENRLHTLDN 398
Query: 114 ATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCN--KITDLNGNLFRHLQKSI--VKA 169
+++ + L T + + C+ K DL+ N + +++ +
Sbjct: 399 R-IFNGLYVL----TKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPEAVQDLSM 453
Query: 170 KKNNNNNEDQVSDREKXXXXXXXXXXRC----NKITDLNGNLFRHLYNLQELSLSFNKLQ 225
K + E+Q+S+ + N+I ++ +F+ L L L+L+ N++Q
Sbjct: 454 LKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQ 513
Query: 226 IIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSL 285
IE + FD +++ + + + + L +L WL + N++ +Y+
Sbjct: 514 SIERGA--FDKNTEIEAIRLDKNFLTDINGIF----ATLASLLWLNLSENHLVWF-DYAF 566
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
++L ++++ N I + N + R+ + S+N + I + + N EL +
Sbjct: 567 IP-SNLKWLDIHGNYIEAL-GNYYKLQEEIRVTTLDASHNRITEIGAMSVPNSIEL--LF 622
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP-----NLVKLDLQDNKLK 400
++ N++ I+ +F + + + L N + I NA P + + L N +
Sbjct: 623 INNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFE 682
Query: 401 -DFN---LNVFSNITSKQTPMNLNLSN 423
D + L +N+T++Q P ++L N
Sbjct: 683 CDCSMEWLQRINNLTTRQHPHVVDLGN 709
Score = 107 (42.7 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P + L L N + E+ V L T +LR LYL+ + + L + L L +L LE+
Sbjct: 791 PQDVSDLYLDGNNMPELEVGHL-TGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLEN 849
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
N + + F + L+ + L N ++ ++ F L +L + +NRL SLP
Sbjct: 850 NKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLP 904
Score = 85 (35.0 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 30/128 (23%), Positives = 55/128 (42%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+D + +P Q +D LYLD N + L+ L L L +N+ +
Sbjct: 776 VDCGRQDLAALPNRIPQDVSD----LYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTL 831
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IE 562
+ + NL+++ L N+++ L G +F LR L + +N L + F + +E
Sbjct: 832 QNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLE 891
Query: 563 KLDISYNQ 570
L + N+
Sbjct: 892 VLRLDNNR 899
Score = 81 (33.6 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 32/136 (23%), Positives = 63/136 (46%)
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
++++ + L N + ++ N+ + L+ + + + + L NL L L++NK
Sbjct: 792 QDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNK 851
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNF 458
L F ++ + L L NN +T++ N + + ++ L L NNR+ +P
Sbjct: 852 LTALEGTEFRSLGLLR---ELYLHNNMLTHI-SNATFEPLVSLEVLRLDNNRLSSLP--H 905
Query: 459 LQTFADSLRKLYLDFN 474
LQ + SL+ L L N
Sbjct: 906 LQ-YRHSLQGLTLGRN 920
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 163 (62.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 77/299 (25%), Positives = 135/299 (45%)
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
E L +D NNI I L +L ++LE N++S I F ++ K+L+ +RL+ N L
Sbjct: 64 ERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQ-DL-KQLERLRLNKNKL 121
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+++ F + +L + LS N ++ I +F+ + + N+ L N I I AF L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALR 181
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI--YIKSL- 444
+L L L +N + + F+++ +T L L +N+ LY D A + +++
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRT---LRLHSNH---LY-CDCHLAWLSDWLRQRR 234
Query: 445 DLSNNRIQEVPVNFLQTF--ADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+ + PV+ L+ F AD +K Y+ A +L S NNI
Sbjct: 235 TIGQFTLCMAPVH-LRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCS-NNIVD 292
Query: 503 VVKRTFIGMP-NLQ--IIDLSF--NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ +P NL I+++ N I + F KL+ ++IS N++ + D F
Sbjct: 293 CRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAF 351
Score = 156 (60.0 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 50/156 (32%), Positives = 77/156 (49%)
Query: 274 NNNIKNIRNYSLYNLTS-----LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + + + I LE N I I F +K+LK I +S N +
Sbjct: 287 SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQ--YKKLKRIDISKNQIS 344
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I D F LK L ++ L N + I F L ++ ++L+ N+I + N F +L N
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L L L DNKL+ + +F+ + S QT L+L+ N
Sbjct: 405 LNLLSLYDNKLQTISKGLFAPLQSIQT---LHLAQN 437
Score = 140 (54.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 80/343 (23%), Positives = 156/343 (45%)
Query: 219 LSFNKLQIIELNSNVF-----DVFEKLQLLEISFSLFNSN--EFPYYILNKNLNTLEWLA 271
+ + KL+ I+++ N D F+ L+ L S L+ + E P + + L +L+ L
Sbjct: 328 IQYKKLKRIDISKNQISDIAPDAFQGLKSLT-SLVLYGNKITEIPKGLFD-GLVSLQLLL 385
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN-YLELI 330
++ N I +R + +L +LN ++L NK+ I LF + ++ + L+ N ++
Sbjct: 386 LNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFA--PLQSIQTLHLAQNPFVCDC 443
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN--LPN 388
+ + N I S S + + K ++ + + + + Y N F + +
Sbjct: 444 HLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSED-YRNRFSSECFMD 502
Query: 389 LVKLDLQ--DNKLKDFNLNVFSNITSK--QTPMNLNLSNNYITNLYENDK-KQAPIYIKS 443
LV + + + D + S I S + +L L++N I L K+ P ++
Sbjct: 503 LVCPEKCRCEGTIVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKKLP-NLRK 561
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
++LSNNRI+EV A +++L L N+++ + F L L+ L L N I+ V
Sbjct: 562 INLSNNRIKEVREGAFDGAA-GVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCV 620
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
TF G+ +++++ L N I+ ++ F L +N+ N
Sbjct: 621 NNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 138 (53.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 42/164 (25%), Positives = 78/164 (47%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I + + + L N + I F LK L + L N + I+ +F++L + + L+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N+++ + F + P L +LDL +N+++ F +T + NL L NN+I+ + E+
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVK---NLQLDNNHISCI-ED 174
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+A ++ L L+NN I + V +R L L N +
Sbjct: 175 GAFRALRDLEILTLNNNNISRILVTSFNHMP-KIRTLRLHSNHL 217
Score = 135 (52.6 bits), Expect = 7.5e-17, Sum P(4) = 7.5e-17
Identities = 47/185 (25%), Positives = 85/185 (45%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L +++N+I + ++ L +L INL N+I ++ F + ++E+ L+ N LE
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAF--DGAAGVQELMLTGNQLE 594
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F L L T+ L NL+ + +F L+++ + L N+I I P AF L +
Sbjct: 595 TMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVS 654
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L ++L N FN N + L I + N + Q P ++K + + +
Sbjct: 655 LSTINLLSNP---FNCNCHMAWLGRW------LRKRRIVS--GNPRCQKPFFLKEIPIQD 703
Query: 449 NRIQE 453
IQ+
Sbjct: 704 VAIQD 708
Score = 126 (49.4 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
LE N ++ + L F ++L I LSNN + ++ + TF N+ L+T+ LSYN L+ I
Sbjct: 759 LEGNHLTAVPKELSTF---RQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP 815
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
+F L ++ + L N I + +F +L +L L L N L
Sbjct: 816 VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 124 (48.7 bits), Expect = 0.00086, P = 0.00086
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
E L L+ NNI + K F G+ NL+++ L N++S++ F +L L ++ N+L+
Sbjct: 64 ERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 551 LPRDVFSNTI-IEKLDISYNQ 570
LP +F +T + +LD+S NQ
Sbjct: 124 LPELLFQSTPKLTRLDLSENQ 144
Score = 123 (48.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 45/167 (26%), Positives = 78/167 (46%)
Query: 409 NITSKQTPMNLNLSNNYIT----NLYENDKKQAPIYIKSLDLSNNRIQEVPVN-FLQTFA 463
N S P + SNN + L E P I + L N I+ +P F+Q
Sbjct: 274 NANSLSCPSACSCSNNIVDCRGKGLTEIPAN-LPEGIVEIRLEQNSIKSIPAGAFIQY-- 330
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE 523
L+++ + N+I + AF L L L L N I + K F G+ +LQ++ L+ N+
Sbjct: 331 KKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANK 390
Query: 524 ISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYN 569
I+ L F L +L++ N+L+++ + +F+ I+ L ++ N
Sbjct: 391 INCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 112 (44.5 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 33/136 (24%), Positives = 61/136 (44%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L L +++N + I + +L L + L NK+ + LF +L + LS
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQST--PKLTRLDLS 141
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N ++ I F + + + L N + I+ +F+ L ++ + L+ N I I +F
Sbjct: 142 ENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSF 201
Query: 384 VNLPNLVKLDLQDNKL 399
++P + L L N L
Sbjct: 202 NHMPKIRTLRLHSNHL 217
Score = 110 (43.8 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 26/98 (26%), Positives = 52/98 (53%)
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K + E+ L N+L + + ++L I LS N + + +F N++++ ++LS+N+
Sbjct: 752 KDVTELYLEGNHLTAVPKE-LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 810
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ I +AF L +L L L N + F+++TS
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTS 848
Score = 109 (43.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y L L++N I + + +LRK+ L N IK + AF G V EL+ L
Sbjct: 531 PEYTTDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELM-LT 589
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + + R F G+ L+ + L N IS + + F +R+L++ NR+ ++ F
Sbjct: 590 GNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAF 649
Query: 557 SNTI 560
+ +
Sbjct: 650 TTLV 653
Score = 107 (42.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+++ + F+ L L+ L L+ NKLQ++ EL +F KL L++S + P
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL---LFQSTPKLTRLDLSENQIQG--IP 149
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ + ++ L +DNN+I I + + L L + L N IS+I + FN +
Sbjct: 150 RKAF-RGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL--VTSFNHMPK 206
Query: 317 LKEIRLSNNYL 327
++ +RL +N+L
Sbjct: 207 IRTLRLHSNHL 217
Score = 102 (41.0 bits), Expect = 7.5e-17, Sum P(4) = 7.5e-17
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 468 KLYLDFNEIKHLDATA--FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
+LYL+ N HL A L L+ L +N+I+++ TF M +L + LS+N +
Sbjct: 756 ELYLEGN---HLTAVPKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
+ F LR+L + N + S+P F++ T + L + N
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 90 (36.7 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KL+ ++I+ + I P AF + + L L +I E+P GLFD + ++ Q+ L L+
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLY--GNKITEIPKGLFDGLVSL-QLLL-LN 387
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
NK++ L + T LQ+L L D +
Sbjct: 388 ANKINCLRVNTFQD----LQNLNLLSLYDNK 414
Score = 87 (35.7 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 262 KNLNTLEWLAM---DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
K L+T L + NN+I + N++ N++ L+ + L YN++ I + FN + L+
Sbjct: 769 KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP--VHAFNGLRSLR 826
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+ L N + + +F +L L+ + L N L
Sbjct: 827 VLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 86 (35.3 bits), Expect = 3.0e-15, Sum P(4) = 3.0e-15
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+DLSNN I + N + L L L +N ++ + AF L L +L+L N+I+ V
Sbjct: 780 IDLSNNSISML-TNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 504 VKRTFIGMPNLQIIDLSFNEI 524
+ +F + +L + L N +
Sbjct: 839 PEGSFNDLTSLSHLALGINPL 859
Score = 82 (33.9 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 30/113 (26%), Positives = 58/113 (51%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N I L +F+ L NL++++LS N+++ E+ FD +Q L ++ N E
Sbjct: 542 NDIAVLEATGIFKKLPNLRKINLSNNRIK--EVREGAFDGAAGVQELMLTG---NQLETM 596
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + + L+ L+ L + +N I + N + L+S+ ++L N+I+ I F
Sbjct: 597 HGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAF 649
Score = 78 (32.5 bits), Expect = 7.5e-17, Sum P(4) = 7.5e-17
Identities = 31/127 (24%), Positives = 64/127 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL-QGIFNS--KLRELEITGKDLKFI 59
L L N++SV+ + ++ +L+ L K L + +F S KL L+++ ++ I
Sbjct: 90 LHLEDNQVSVIERGA-FQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGI 148
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
AF + +L L N I + G F + ++E +TL+ +N +S + + T +++
Sbjct: 149 PRKAFRGVTGVKNLQLD--NNHISCIEDGAFRALRDLEILTLN--NNNISRI-LVTSFNH 203
Query: 120 VTKLQHL 126
+ K++ L
Sbjct: 204 MPKIRTL 210
Score = 78 (32.5 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 411 TSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
T +Q + ++LSNN I+ L N ++ +L LS NR++ +PV+ SLR L
Sbjct: 773 TFRQLTL-IDLSNNSISML-TNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLR-SLRVLT 829
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHN 498
L N+I + +F +L L L+L N
Sbjct: 830 LHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 76 (31.8 bits), Expect = 7.5e-17, Sum P(4) = 7.5e-17
Identities = 29/102 (28%), Positives = 44/102 (43%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N+I+D+ + F+ L KS+ N + NKI L N F
Sbjct: 341 NQISDIAPDAFQGL-KSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTF 399
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
+ L NL LSL NKLQ I + +F + +Q L ++ + F
Sbjct: 400 QDLQNLNLLSLYDNKLQTI--SKGLFAPLQSIQTLHLAQNPF 439
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 3 LDLSHNKLS-VLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS--KLRELEITGKDLKFI 59
+D S+ KLS + + Y+ +L +L+ GIF LR++ ++ +K +
Sbjct: 516 VDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEAT---GIFKKLPNLRKINLSNNRIKEV 572
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMAT 115
AFD +L L T Q+E + +F + ++ TL L N +S +N T
Sbjct: 573 REGAFDGAAGVQELML--TGNQLETMHGRMFRGLSGLK--TLMLRSNLISCVNNDT 624
Score = 54 (24.1 bits), Expect = 1.9e-14, Sum P(4) = 1.9e-14
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
LDL N ++ + + T L++L L+ +Q+ +G F +L L + L
Sbjct: 66 LDLDRNNITRITKM----DFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 57 KFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
+ + F + LT L ++ QI+ +P F + ++ + LD +H
Sbjct: 122 QVLPELLFQSTPK---LTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNH 168
Score = 54 (24.1 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS--NVTKLQHLG---TT 129
+++ I+ +P+G F + + +++ +D+S N++S + ++T L G T
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKR--IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 130 ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
I K NKI L N F+ LQ
Sbjct: 370 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 403
Score = 52 (23.4 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 23/110 (20%), Positives = 56/110 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+D+S N++S + L+ L + +L G+++ +G+F+ L+ L + +
Sbjct: 336 IDISKNQISDIAPDAFQG----LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 391
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
+ + F ++ +L L + + +++ + GLF +++I+ TL L+ N
Sbjct: 392 NCLRVNTFQDLQNL-NL-LSLYDNKLQTISKGLFAPLQSIQ--TLHLAQN 437
Score = 51 (23.0 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
R N I+ +N + F L +++ LSL N++ I + F L + + + FN N
Sbjct: 613 RSNLISCVNNDTFAGLSSVRLLSLYDNRITTI--SPGAFTTLVSLSTINLLSNPFNCN 668
Score = 51 (23.0 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 28/119 (23%), Positives = 46/119 (38%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
++ + L N + + P L +DL +N + + FSN++ T L LS
Sbjct: 753 DVTELYLEGNHLTAV-PKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLST---LILSY 808
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT 482
N + + + ++ L L N I VP SL L L N + H D +
Sbjct: 809 NRLRCIPVHAFNGLRS-LRVLTLHGNDISSVPEGSFNDLT-SLSHLALGINPL-HCDCS 864
Score = 48 (22.0 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 24/119 (20%), Positives = 49/119 (41%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNI 67
N LS + + +N+ + G T + + +GI +L + +K I AF
Sbjct: 276 NSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQ-----NSIKSIPAGAFIQY 330
Query: 68 DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ I+ QI ++ F ++++ + L NK++ + L+ + LQ L
Sbjct: 331 KKLK--RIDISKNQISDIAPDAFQGLKSLTSLVL--YGNKITEIPKG-LFDGLVSLQLL 384
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 163 (62.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 77/299 (25%), Positives = 135/299 (45%)
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
E L +D NNI I L +L ++LE N++S I F ++ K+L+ +RL+ N L
Sbjct: 64 ERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQ-DL-KQLERLRLNKNKL 121
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+++ F + +L + LS N ++ I +F+ + + N+ L N I I AF L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALR 181
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI--YIKSL- 444
+L L L +N + + F+++ +T L L +N+ LY D A + +++
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRT---LRLHSNH---LY-CDCHLAWLSDWLRQRR 234
Query: 445 DLSNNRIQEVPVNFLQTF--ADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+ + PV+ L+ F AD +K Y+ A +L S NNI
Sbjct: 235 TIGQFTLCMAPVH-LRGFSVADVQKKEYVCPGPHSEAPACNANSLSCPSACSCS-NNIVD 292
Query: 503 VVKRTFIGMP-NLQ--IIDLSF--NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ +P NL I+++ N I + F KL+ ++IS N++ + D F
Sbjct: 293 CRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAF 351
Score = 156 (60.0 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 50/156 (32%), Positives = 77/156 (49%)
Query: 274 NNNIKNIRNYSLYNLTS-----LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + + + I LE N I I F +K+LK I +S N +
Sbjct: 287 SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQ--YKKLKRIDISKNQIS 344
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I D F LK L ++ L N + I F L ++ ++L+ N+I + N F +L N
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L L L DNKL+ + +F+ + S QT L+L+ N
Sbjct: 405 LNLLSLYDNKLQTISKGLFAPLQSIQT---LHLAQN 437
Score = 140 (54.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 80/343 (23%), Positives = 156/343 (45%)
Query: 219 LSFNKLQIIELNSNVF-----DVFEKLQLLEISFSLFNSN--EFPYYILNKNLNTLEWLA 271
+ + KL+ I+++ N D F+ L+ L S L+ + E P + + L +L+ L
Sbjct: 328 IQYKKLKRIDISKNQISDIAPDAFQGLKSLT-SLVLYGNKITEIPKGLFD-GLVSLQLLL 385
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN-YLELI 330
++ N I +R + +L +LN ++L NK+ I LF + ++ + L+ N ++
Sbjct: 386 LNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFA--PLQSIQTLHLAQNPFVCDC 443
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN--LPN 388
+ + N I S S + + K ++ + + + + Y N F + +
Sbjct: 444 HLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSED-YRNRFSSECFMD 502
Query: 389 LVKLDLQ--DNKLKDFNLNVFSNITSK--QTPMNLNLSNNYITNLYENDK-KQAPIYIKS 443
LV + + + D + S I S + +L L++N I L K+ P ++
Sbjct: 503 LVCPEKCRCEGTIVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKKLP-NLRK 561
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
++LSNNRI+EV A +++L L N+++ + F L L+ L L N I+ V
Sbjct: 562 INLSNNRIKEVREGAFDGAA-GVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCV 620
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
TF G+ +++++ L N I+ ++ F L +N+ N
Sbjct: 621 NNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 138 (53.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 42/164 (25%), Positives = 78/164 (47%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I + + + L N + I F LK L + L N + I+ +F++L + + L+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N+++ + F + P L +LDL +N+++ F +T + NL L NN+I+ + E+
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVK---NLQLDNNHISCI-ED 174
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+A ++ L L+NN I + V +R L L N +
Sbjct: 175 GAFRALRDLEILTLNNNNISRILVTSFNHMP-KIRTLRLHSNHL 217
Score = 135 (52.6 bits), Expect = 7.5e-17, Sum P(4) = 7.5e-17
Identities = 47/185 (25%), Positives = 85/185 (45%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L +++N+I + ++ L +L INL N+I ++ F + ++E+ L+ N LE
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAF--DGAAGVQELMLTGNQLE 594
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F L L T+ L NL+ + +F L+++ + L N+I I P AF L +
Sbjct: 595 TMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVS 654
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L ++L N FN N + L I + N + Q P ++K + + +
Sbjct: 655 LSTINLLSNP---FNCNCHMAWLGRW------LRKRRIVS--GNPRCQKPFFLKEIPIQD 703
Query: 449 NRIQE 453
IQ+
Sbjct: 704 VAIQD 708
Score = 126 (49.4 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
LE N ++ + L F ++L I LSNN + ++ + TF N+ L+T+ LSYN L+ I
Sbjct: 759 LEGNHLTAVPKELSTF---RQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP 815
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
+F L ++ + L N I + +F +L +L L L N L
Sbjct: 816 VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 124 (48.7 bits), Expect = 0.00086, P = 0.00086
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
E L L+ NNI + K F G+ NL+++ L N++S++ F +L L ++ N+L+
Sbjct: 64 ERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 551 LPRDVFSNTI-IEKLDISYNQ 570
LP +F +T + +LD+S NQ
Sbjct: 124 LPELLFQSTPKLTRLDLSENQ 144
Score = 123 (48.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 45/167 (26%), Positives = 78/167 (46%)
Query: 409 NITSKQTPMNLNLSNNYIT----NLYENDKKQAPIYIKSLDLSNNRIQEVPVN-FLQTFA 463
N S P + SNN + L E P I + L N I+ +P F+Q
Sbjct: 274 NANSLSCPSACSCSNNIVDCRGKGLTEIPAN-LPEGIVEIRLEQNSIKSIPAGAFIQY-- 330
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE 523
L+++ + N+I + AF L L L L N I + K F G+ +LQ++ L+ N+
Sbjct: 331 KKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANK 390
Query: 524 ISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYN 569
I+ L F L +L++ N+L+++ + +F+ I+ L ++ N
Sbjct: 391 INCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 112 (44.5 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 33/136 (24%), Positives = 61/136 (44%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L L +++N + I + +L L + L NK+ + LF +L + LS
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQST--PKLTRLDLS 141
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N ++ I F + + + L N + I+ +F+ L ++ + L+ N I I +F
Sbjct: 142 ENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSF 201
Query: 384 VNLPNLVKLDLQDNKL 399
++P + L L N L
Sbjct: 202 NHMPKIRTLRLHSNHL 217
Score = 110 (43.8 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 26/98 (26%), Positives = 52/98 (53%)
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K + E+ L N+L + + ++L I LS N + + +F N++++ ++LS+N+
Sbjct: 752 KDVTELYLEGNHLTAVPKE-LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 810
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ I +AF L +L L L N + F+++TS
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTS 848
Score = 109 (43.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y L L++N I + + +LRK+ L N IK + AF G V EL+ L
Sbjct: 531 PEYTTDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELM-LT 589
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + + R F G+ L+ + L N IS + + F +R+L++ NR+ ++ F
Sbjct: 590 GNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAF 649
Query: 557 SNTI 560
+ +
Sbjct: 650 TTLV 653
Score = 107 (42.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+++ + F+ L L+ L L+ NKLQ++ EL +F KL L++S + P
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL---LFQSTPKLTRLDLSENQIQG--IP 149
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ + ++ L +DNN+I I + + L L + L N IS+I + FN +
Sbjct: 150 RKAF-RGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL--VTSFNHMPK 206
Query: 317 LKEIRLSNNYL 327
++ +RL +N+L
Sbjct: 207 IRTLRLHSNHL 217
Score = 102 (41.0 bits), Expect = 7.5e-17, Sum P(4) = 7.5e-17
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 468 KLYLDFNEIKHLDATA--FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
+LYL+ N HL A L L+ L +N+I+++ TF M +L + LS+N +
Sbjct: 756 ELYLEGN---HLTAVPKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
+ F LR+L + N + S+P F++ T + L + N
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 90 (36.7 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KL+ ++I+ + I P AF + + L L +I E+P GLFD + ++ Q+ L L+
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLY--GNKITEIPKGLFDGLVSL-QLLL-LN 387
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
NK++ L + T LQ+L L D +
Sbjct: 388 ANKINCLRVNTFQD----LQNLNLLSLYDNK 414
Score = 87 (35.7 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 262 KNLNTLEWLAM---DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
K L+T L + NN+I + N++ N++ L+ + L YN++ I + FN + L+
Sbjct: 769 KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP--VHAFNGLRSLR 826
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+ L N + + +F +L L+ + L N L
Sbjct: 827 VLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 86 (35.3 bits), Expect = 3.0e-15, Sum P(4) = 3.0e-15
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+DLSNN I + N + L L L +N ++ + AF L L +L+L N+I+ V
Sbjct: 780 IDLSNNSISML-TNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 504 VKRTFIGMPNLQIIDLSFNEI 524
+ +F + +L + L N +
Sbjct: 839 PEGSFNDLTSLSHLALGINPL 859
Score = 82 (33.9 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 30/113 (26%), Positives = 58/113 (51%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N I L +F+ L NL++++LS N+++ E+ FD +Q L ++ N E
Sbjct: 542 NDIAVLEATGIFKKLPNLRKINLSNNRIK--EVREGAFDGAAGVQELMLTG---NQLETM 596
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + + L+ L+ L + +N I + N + L+S+ ++L N+I+ I F
Sbjct: 597 HGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAF 649
Score = 78 (32.5 bits), Expect = 7.5e-17, Sum P(4) = 7.5e-17
Identities = 31/127 (24%), Positives = 64/127 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL-QGIFNS--KLRELEITGKDLKFI 59
L L N++SV+ + ++ +L+ L K L + +F S KL L+++ ++ I
Sbjct: 90 LHLEDNQVSVIERGA-FQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGI 148
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
AF + +L L N I + G F + ++E +TL+ +N +S + + T +++
Sbjct: 149 PRKAFRGVTGVKNLQLD--NNHISCIEDGAFRALRDLEILTLN--NNNISRI-LVTSFNH 203
Query: 120 VTKLQHL 126
+ K++ L
Sbjct: 204 MPKIRTL 210
Score = 78 (32.5 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 411 TSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
T +Q + ++LSNN I+ L N ++ +L LS NR++ +PV+ SLR L
Sbjct: 773 TFRQLTL-IDLSNNSISML-TNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLR-SLRVLT 829
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHN 498
L N+I + +F +L L L+L N
Sbjct: 830 LHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 76 (31.8 bits), Expect = 7.5e-17, Sum P(4) = 7.5e-17
Identities = 29/102 (28%), Positives = 44/102 (43%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N+I+D+ + F+ L KS+ N + NKI L N F
Sbjct: 341 NQISDIAPDAFQGL-KSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTF 399
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
+ L NL LSL NKLQ I + +F + +Q L ++ + F
Sbjct: 400 QDLQNLNLLSLYDNKLQTI--SKGLFAPLQSIQTLHLAQNPF 439
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 3 LDLSHNKLS-VLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS--KLRELEITGKDLKFI 59
+D S+ KLS + + Y+ +L +L+ GIF LR++ ++ +K +
Sbjct: 516 VDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEAT---GIFKKLPNLRKINLSNNRIKEV 572
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMAT 115
AFD +L L T Q+E + +F + ++ TL L N +S +N T
Sbjct: 573 REGAFDGAAGVQELML--TGNQLETMHGRMFRGLSGLK--TLMLRSNLISCVNNDT 624
Score = 54 (24.1 bits), Expect = 1.9e-14, Sum P(4) = 1.9e-14
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
LDL N ++ + + T L++L L+ +Q+ +G F +L L + L
Sbjct: 66 LDLDRNNITRITKM----DFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 57 KFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
+ + F + LT L ++ QI+ +P F + ++ + LD +H
Sbjct: 122 QVLPELLFQSTPK---LTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNH 168
Score = 54 (24.1 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS--NVTKLQHLG---TT 129
+++ I+ +P+G F + + +++ +D+S N++S + ++T L G T
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKR--IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 130 ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
I K NKI L N F+ LQ
Sbjct: 370 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 403
Score = 52 (23.4 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 23/110 (20%), Positives = 56/110 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+D+S N++S + L+ L + +L G+++ +G+F+ L+ L + +
Sbjct: 336 IDISKNQISDIAPDAFQG----LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 391
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
+ + F ++ +L L + + +++ + GLF +++I+ TL L+ N
Sbjct: 392 NCLRVNTFQDLQNL-NL-LSLYDNKLQTISKGLFAPLQSIQ--TLHLAQN 437
Score = 51 (23.0 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
R N I+ +N + F L +++ LSL N++ I + F L + + + FN N
Sbjct: 613 RSNLISCVNNDTFAGLSSVRLLSLYDNRITTI--SPGAFTTLVSLSTINLLSNPFNCN 668
Score = 51 (23.0 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 28/119 (23%), Positives = 46/119 (38%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
++ + L N + + P L +DL +N + + FSN++ T L LS
Sbjct: 753 DVTELYLEGNHLTAV-PKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLST---LILSY 808
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT 482
N + + + ++ L L N I VP SL L L N + H D +
Sbjct: 809 NRLRCIPVHAFNGLRS-LRVLTLHGNDISSVPEGSFNDLT-SLSHLALGINPL-HCDCS 864
Score = 48 (22.0 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 24/119 (20%), Positives = 49/119 (41%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNI 67
N LS + + +N+ + G T + + +GI +L + +K I AF
Sbjct: 276 NSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQ-----NSIKSIPAGAFIQY 330
Query: 68 DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ I+ QI ++ F ++++ + L NK++ + L+ + LQ L
Sbjct: 331 KKLK--RIDISKNQISDIAPDAFQGLKSLTSLVL--YGNKITEIPKG-LFDGLVSLQLL 384
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 240 (89.5 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 90/332 (27%), Positives = 156/332 (46%)
Query: 197 CN--KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
CN ++T + GNL + Q L L N + V ++ + L E+ FS N
Sbjct: 58 CNDLRLTRIPGNLSS---DTQVLLLQSNNIA-----KTVDELQQLFNLTELDFSQNNFTN 109
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
L NL L L ++ N I + +Y L +L++L + + +N+IS I N F +
Sbjct: 110 IKEVGL-ANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISSISANAFS-GL- 166
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K L + L++N L++I+S F + L + + N + I +F+ L+N+ ++VL+
Sbjct: 167 KNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMY 226
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
+ I NA V L +L L DNKL + + + L+L+ N I + E D
Sbjct: 227 LTDIPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLKF---LDLNKNPIHKIQEGDF 283
Query: 435 KQAPIYIKSLDLSN-NRIQEVPVNFLQTFADSLRKLYLDFN-EIKHLDATAFGNLDVLEL 492
K + +K L ++N + V L + L KL N ++ ++ AF ++ LE
Sbjct: 284 KNM-LRLKELGINNMGELVSVDRYALDNLPE-LTKLEATNNPKLSYIHRLAFRSVPALES 341
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
L L +N + V ++T +PNL+ I + N +
Sbjct: 342 LMLNNNALNAVYQKTVESLPNLREISIHSNPL 373
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 68/250 (27%), Positives = 113/250 (45%)
Query: 287 NLTS-LNYINLEYNKISKIHNNLFH-FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTI 344
NL+S + L+ N I+K + L FN L E+ S N I+ NL +L T+
Sbjct: 69 NLSSDTQVLLLQSNNIAKTVDELQQLFN----LTELDFSQNNFTNIKEVGLANLTQLTTL 124
Query: 345 TLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNL 404
L N + + ++L+N+ + ++ NQI I NAF L NL++L L NKLK +
Sbjct: 125 HLEENQISEMTDYCLQDLSNLQELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDS 184
Query: 405 NVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFA 463
F + + + M + N + + D P+ ++SL L+ + ++P N L
Sbjct: 185 RWFDSTPNLEILM---IGENPVIGIL--DMNFRPLSNLRSLVLAGMYLTDIPGNALVGL- 238
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE 523
DSL L N++ + A + L+ L L N I + + F M L++ +L N
Sbjct: 239 DSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNM--LRLKELGINN 296
Query: 524 ISMLTGEQFY 533
+ L Y
Sbjct: 297 MGELVSVDRY 306
Score = 162 (62.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 65/251 (25%), Positives = 111/251 (44%)
Query: 323 SNNYLELI-ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
SNN + + E +NL EL+ S N +IK NL + + L NQI +
Sbjct: 81 SNNIAKTVDELQQLFNLTELD---FSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDY 137
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
+L NL +L + N++ + N FS + + + L+L++N + + P +
Sbjct: 138 CLQDLSNLQELYINHNQISSISANAFSGLKNL---LRLHLNSNKLKVIDSRWFDSTP-NL 193
Query: 442 KSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
+ L + N + + +NF +LR L L + + A LD LE LS N +
Sbjct: 194 EILMIGENPVIGILDMNFRPL--SNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKL 251
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH-NRLRSLPRDVFSNT 559
V + +PNL+ +DL+ N I + F +L+ L I++ L S+ R N
Sbjct: 252 IKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNL 311
Query: 560 I-IEKLDISYN 569
+ KL+ + N
Sbjct: 312 PELTKLEATNN 322
Score = 148 (57.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 54/207 (26%), Positives = 105/207 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNK-LQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
NK+ ++ F NL+ L + N + I+++N F L+ L ++ ++ + + P
Sbjct: 177 NKLKVIDSRWFDSTPNLEILMIGENPVIGILDMN---FRPLSNLRSLVLA-GMYLT-DIP 231
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L L++LE L+ +N + + +L + +L +++L N I KI F N+ R
Sbjct: 232 GNAL-VGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFK-NM-LR 288
Query: 317 LKEIRLSNNYLELIESDTFY--NLKELNTITLSYN-LLKSIKTTSFKNLNNMLNIVLSFN 373
LKE+ + NN EL+ D + NL EL + + N L I +F+++ + +++L+ N
Sbjct: 289 LKELGI-NNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNN 347
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLK 400
+ +Y +LPNL ++ + N L+
Sbjct: 348 ALNAVYQKTVESLPNLREISIHSNPLR 374
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/173 (26%), Positives = 80/173 (46%)
Query: 405 NVFSNITSKQTPMNL---NLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQT 461
N+ + Q NL + S N TN+ E + +L L N+I E+ LQ
Sbjct: 83 NIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLT-QLTTLHLEENQISEMTDYCLQD 141
Query: 462 FADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
++ L++LY++ N+I + A AF L L L L N + V+ R F PNL+I+ +
Sbjct: 142 LSN-LQELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGE 200
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLD-ISYNQDKI 573
N + + F LR L ++ L +P + ++ L+ +S+ +K+
Sbjct: 201 NPVIGILDMNFRPLSNLRSLVLAGMYLTDIPGNALVG--LDSLESLSFYDNKL 251
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 241 (89.9 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 93/357 (26%), Positives = 169/357 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T + F LY+L+ L L N+L+ + + + L+ L+ S L ++N Y
Sbjct: 100 NALTYIPKGAFTGLYSLKVLMLQNNQLRHVPT-----EALQNLRSLQ-SLRL-DANHISY 152
Query: 258 YILN--KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L++L L +D+N + I + +L++L + L NKI I + F N+
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFG-NLSS 211
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L + L NN + + F L L T+ L+YN L T + + L+N+ + N I
Sbjct: 212 -LVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNI 269
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ I AFV P+L+ + DN ++ + F ++ +T + LN ++ IT E
Sbjct: 270 RSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRT-LTLNGASQ-IT---EFPDL 324
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
++SL L+ +I +P + L+ L L +N ++ D +F L+ + L
Sbjct: 325 TGTANLESLTLTGAQISSLPQTVCNQLPN-LQVLDLSYNLLE--DLPSFSVCQKLQKIDL 381
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
HN I + TF + +L+ ++L++N+I+++ F L L++S N L S P
Sbjct: 382 RHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFP 438
Score = 227 (85.0 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 79/293 (26%), Positives = 133/293 (45%)
Query: 292 NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+Y++L N IS++ N ++ + L+E+RL+ N L I F L L + L N L
Sbjct: 69 SYLDLSMNNISQLLPNPLP-SL-RFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQL 126
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
+ + T + +NL ++ ++ L N I Y+ P+ F L +L L L DN L + + F +++
Sbjct: 127 RHVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLS 186
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
+ Q M L L+ + Y + + L L NNRI + SL L L
Sbjct: 187 ALQA-MTLALNKIHHIPDYAFGNLSSLVV---LHLHNNRIHSLGKKCFDGL-HSLETLDL 241
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
++N + TA L L+ L NNI + ++ F+G P+L I N I +
Sbjct: 242 NYNNLDEFP-TAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSA 300
Query: 532 FYFSFKLRILNISH-NRLRSLPRDVFSNTIIEKLDISYNQDKIRPGRESNPRP 583
F +LR L ++ +++ P D+ +E L ++ Q P N P
Sbjct: 301 FQHLPELRTLTLNGASQITEFP-DLTGTANLESLTLTGAQISSLPQTVCNQLP 352
Score = 217 (81.4 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 91/327 (27%), Positives = 153/327 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L +L+ L + NN ++++ +L NL SL + L+ N IS + + F +H L+ + L
Sbjct: 113 LYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSCFS-GLHS-LRHLWLD 170
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
+N L I F +L L +TL+ N + I +F NL++++ + L N+I + F
Sbjct: 171 DNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCF 230
Query: 384 VNLPNLVKLDLQDNKLKDFN--LNVFSNITS--------KQTPMNLNLSN-NYIT-NLYE 431
L +L LDL N L +F + SN+ + P + N + IT + Y+
Sbjct: 231 DGLHSLETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYD 290
Query: 432 NDKK-------QAPIYIKSLDLSN-NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N + Q +++L L+ ++I E P T +L L L +I L T
Sbjct: 291 NPIQFVGRSAFQHLPELRTLTLNGASQITEFPD---LTGTANLESLTLTGAQISSLPQTV 347
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNI 543
L L++L L +N + + +F LQ IDL NEI + + F LR LN+
Sbjct: 348 CNQLPNLQVLDLSYNLLEDLP--SFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNL 405
Query: 544 SHNRLRSLPRDVFSNT-IIEKLDISYN 569
+ N++ + + FS + KLD+S N
Sbjct: 406 AWNKIAIIHPNAFSTLPSLIKLDLSSN 432
Score = 207 (77.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 87/333 (26%), Positives = 156/333 (46%)
Query: 242 LLEISFSLFNSNEFPYYILNKNLNTL-EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
LL + S +E P NL+ +L + NNI + L +L L + L N
Sbjct: 47 LLRVDCSDLGLSELP-----SNLSVFTSYLDLSMNNISQLLPNPLPSLRFLEELRLAGNA 101
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
++ I F ++ LK + L NN L + ++ NL+ L ++ L N + + + F
Sbjct: 102 LTYIPKGAFT-GLYS-LKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSCFS 159
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
L+++ ++ L N + I AF +L L + L NK+ F N++S L+
Sbjct: 160 GLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVV---LH 216
Query: 421 LSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
L NN I +L K ++ +++LDL+ N + E P ++T ++ L++L N I+ +
Sbjct: 217 LHNNRIHSL--GKKCFDGLHSLETLDLNYNNLDEFPTA-IRTLSN-LKELGFHSNNIRSI 272
Query: 480 DATAF-GNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG-EQFYFSFK 537
AF GN ++ + + N I V + F +P L+ + L N S +T +
Sbjct: 273 PEKAFVGNPSLITIHFYD-NPIQFVGRSAFQHLPELRTLTL--NGASQITEFPDLTGTAN 329
Query: 538 LRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
L L ++ ++ SLP+ V + ++ LD+SYN
Sbjct: 330 LESLTLTGAQISSLPQTVCNQLPNLQVLDLSYN 362
Score = 207 (77.9 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 94/374 (25%), Positives = 157/374 (41%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
L EL + G L +I AF + Y L L + N Q+ +P+ + +++ + LD +
Sbjct: 92 LEELRLAGNALTYIPKGAFTGL---YSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDAN 148
Query: 105 HNKLSVLNMATLYSNVTKLQHLG------TTILKDREKXXXXXXXXXXRCNKITDLNGNL 158
H +S + + +S + L+HL T I + NKI +
Sbjct: 149 H--ISYVP-PSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYA 205
Query: 159 FRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELS 218
F +L S+V +NN N + + R L NL+EL
Sbjct: 206 FGNLS-SLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFP-TAIRTLSNLKELG 263
Query: 219 LSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIK 278
N ++ I + V + L+ I F N +F ++L L L + N
Sbjct: 264 FHSNNIRSIPEKAFVGNP----SLITIHF-YDNPIQFVGRSAFQHLPELRTLTL--NGAS 316
Query: 279 NIRNY-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
I + L +L + L +IS + + N L+ + LS N LE + S F
Sbjct: 317 QITEFPDLTGTANLESLTLTGAQISSLPQTVC--NQLPNLQVLDLSYNLLEDLPS--FSV 372
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
++L I L +N + IK +F+ L ++ ++ L++N+I I+PNAF LP+L+KLDL N
Sbjct: 373 CQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSN 432
Query: 398 KLKDFNLNVFSNIT 411
L F + +T
Sbjct: 433 LLSSFPITGLHGLT 446
Score = 190 (71.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 96/362 (26%), Positives = 163/362 (45%)
Query: 199 KITDLNGNLFRH-----LYNLQEL-SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS 252
K+ L N RH L NL+ L SL + I + + F L+ L + +
Sbjct: 117 KVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALT- 175
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
E P ++L+ L+ + + N I +I +Y+ NL+SL ++L N+I + F
Sbjct: 176 -EIPVQAF-RSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFD-G 232
Query: 313 IHKRLKEIRLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
+H L+ + L+ N L+ + T NLKEL N ++SI +F +++ I
Sbjct: 233 LHS-LETLDLNYNNLDEFPTAIRTLSNLKELG---FHSNNIRSIPEKAFVGNPSLITIHF 288
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQD-NKLKDF-NLNVFSNITS-----------KQTPM 417
N I+++ +AF +LP L L L +++ +F +L +N+ S QT
Sbjct: 289 YDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGTANLESLTLTGAQISSLPQTVC 348
Query: 418 NLNLSNNYITNLYENDKKQAPIY-----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
N L N + +L N + P + ++ +DL +N I E+ V+ Q SLR L L
Sbjct: 349 N-QLPNLQVLDLSYNLLEDLPSFSVCQKLQKIDLRHNEIYEIKVDTFQQLL-SLRSLNLA 406
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI--SMLTGE 530
+N+I + AF L L L L N ++ G+ L + L+ N S+++ E
Sbjct: 407 WNKIAIIHPNAFSTLPSLIKLDLSSNLLSSF---PITGLHGLTHLKLTGNHALQSLISSE 463
Query: 531 QF 532
F
Sbjct: 464 NF 465
Score = 37 (18.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
P AF++ +L+ L ++ F L V + + P+ L N + + +KQ +
Sbjct: 781 PVAFLSFSSLINLTFISPEVIKFILLVVVPLPACLNPLLYILFNPHFKEDLVSLRKQTYV 840
Query: 440 YIKS 443
+ +S
Sbjct: 841 WTRS 844
>UNIPROTKB|Q2LDA0 [details] [associations]
symbol:TLR5 "Toll-like receptor 5" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0005149
"interleukin-1 receptor binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0034146 "toll-like receptor 5 signaling pathway"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027176
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005622 GO:GO:0032757
GO:GO:0071260 GeneTree:ENSGT00700000104185 SUPFAM:SSF52200
GO:GO:0034123 HOGENOM:HOG000008675 HOVERGEN:HBG023182
PANTHER:PTHR24365:SF7 EMBL:DAAA02042627 EMBL:DQ335128 EMBL:EU006637
EMBL:EU006638 EMBL:EU006639 EMBL:EU006640 EMBL:JQ805125
EMBL:JQ805126 EMBL:JQ805127 EMBL:JQ805128 EMBL:JQ805129
EMBL:JQ805130 EMBL:JQ805131 EMBL:JQ805132 EMBL:JQ805133
EMBL:JQ805134 EMBL:JQ805136 EMBL:JQ805137 IPI:IPI00694158
UniGene:Bt.66307 STRING:Q2LDA0 Ensembl:ENSBTAT00000000604
InParanoid:Q2LDA0 OMA:DHINNIR Uniprot:Q2LDA0
Length = 858
Score = 208 (78.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 90/316 (28%), Positives = 140/316 (44%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
+N+K+ ++ L + I L+ + N F + LK + L+ N + I +
Sbjct: 272 SNLKDPDYHTFAGLARSSMIQLDISHGYIFSLNFRIFETLQELKVLNLAYNKINSISRNA 331
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
FY L L + +SYNLL + F L + I L N I I F L L LDL
Sbjct: 332 FYGLDNLQVLNISYNLLGELYNYDFDGLPKVAYIDLQKNHIGIIQDKTFKFLGKLNTLDL 391
Query: 395 QDNKLKDFNL-----NVFSN----ITSKQTPMNLN---LSNNYITNLYENDKK---QAPI 439
+DN LK N+F + +T P+ N LS N + NL ND Q P
Sbjct: 392 RDNALKTIYFLPSIPNIFLSGNKLMTLPNIPLTANFIQLSENRLENL--NDLYFLLQVP- 448
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-----FGNLDVLELLS 494
+++ L L+ NR N + SL KL+L N ++ T F L L+LL
Sbjct: 449 HLQILILNQNRFSFCHQNHAPSENSSLEKLFLGENMLQLAWETGSCWDIFKGLSHLQLLY 508
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML-TGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + F + L+ + L N +++L G+ L IL+IS N+L S
Sbjct: 509 LNKNYLNFLPPGVFHHLTALRGLSLKDNRLTVLFPGD---LPANLEILDISGNQLLSPDP 565
Query: 554 DVFSNTIIEKLDISYN 569
D+F++ + +DI++N
Sbjct: 566 DLFAS--LSAIDITHN 579
Score = 180 (68.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 88/358 (24%), Positives = 156/358 (43%)
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
+ L LSFN ++ + S F E+LQLLE+ + F Y +NL L L +
Sbjct: 49 KSLLLSFNYIRTVTTAS--FPFLEQLQLLELG-TQFTPLTI-YREAFRNLPNLRILDLGG 104
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE-LIESD 333
+ I + + L L + L +S +F L + LS N ++ L
Sbjct: 105 SQINFLHPDAFQGLPHLTKLRLFSCGLSDAVLKDGYFRNLASLTHLDLSKNKIQSLYLHP 164
Query: 334 TFYNLKELNTITLSYNLLKSI----------KTTSFKNL-NNMLNIVLSFNQIKYIYPNA 382
+F L L +I S+N + + KT SF +L +N L +S + K + P
Sbjct: 165 SFRELNSLKSIDFSFNKIPIVCEQEFKPLQGKTLSFLSLADNQLYSRVSVDWNKCLNP-- 222
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F N+ L LD+ N + FSN + +L L+ + + + + + P Y
Sbjct: 223 FRNMV-LETLDVSGNGWGVDIMRNFSNAINGSQIFSLVLTRHIMGSSFGFSNLKDPDYHT 281
Query: 443 SLDLSNNRIQEVPVNFLQTFA---------DSLRKLYLDFNEIKHLDATAFGNLDVLELL 493
L+ + + ++ ++ F+ L+ L L +N+I + AF LD L++L
Sbjct: 282 FAGLARSSMIQLDISHGYIFSLNFRIFETLQELKVLNLAYNKINSISRNAFYGLDNLQVL 341
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
++ +N + + F G+P + IDL N I ++ + F F KL L++ N L+++
Sbjct: 342 NISYNLLGELYNYDFDGLPKVAYIDLQKNHIGIIQDKTFKFLGKLNTLDLRDNALKTI 399
Score = 170 (64.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 105/406 (25%), Positives = 174/406 (42%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
NKI L + FR L +L+ + SFNK+ I+ F+ LQ +SF N+
Sbjct: 155 NKIQSLYLHPSFRELNSLKSIDFSFNKIPIV-----CEQEFKPLQGKTLSFLSLADNQLY 209
Query: 257 YYIL---NKNLN-----TLEWLAMDNNN--IKNIRNYS-------LYNLTSLNYINLEYN 299
+ NK LN LE L + N + +RN+S +++L +I
Sbjct: 210 SRVSVDWNKCLNPFRNMVLETLDVSGNGWGVDIMRNFSNAINGSQIFSLVLTRHIMGSSF 269
Query: 300 KISKIHNNLFH-FNIHKRLKEIRL--SNNYLELIESDTFYNLKELNTITLSYNLLKSIKT 356
S + + +H F R I+L S+ Y+ + F L+EL + L+YN + SI
Sbjct: 270 GFSNLKDPDYHTFAGLARSSMIQLDISHGYIFSLNFRIFETLQELKVLNLAYNKINSISR 329
Query: 357 TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTP 416
+F L+N+ + +S+N + +Y F LP + +DLQ N + F + T
Sbjct: 330 NAFYGLDNLQVLNISYNLLGELYNYDFDGLPKVAYIDLQKNHIGIIQDKTFKFLGKLNT- 388
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-----VNFLQTFADSLRKLY- 470
L+L +N + +Y P I ++ LS N++ +P NF+Q + L L
Sbjct: 389 --LDLRDNALKTIYF-----LPS-IPNIFLSGNKLMTLPNIPLTANFIQLSENRLENLND 440
Query: 471 LDFN-EIKHLDATAFGNLDVLELLSLEHNNIAVV----VKRTFIGMPNLQIIDLSFNEIS 525
L F ++ HL S H N A +++ F+G LQ L++ S
Sbjct: 441 LYFLLQVPHLQILILNQ----NRFSFCHQNHAPSENSSLEKLFLGENMLQ---LAWETGS 493
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQ 570
+ F L++L ++ N L LP VF + T + L + N+
Sbjct: 494 CW--DIFKGLSHLQLLYLNKNYLNFLPPGVFHHLTALRGLSLKDNR 537
Score = 136 (52.9 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 80/334 (23%), Positives = 147/334 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS-NEFP 256
+ + D + + F L + L + I LN +F+ ++L++L ++++ NS +
Sbjct: 272 SNLKDPDYHTFAGLARSSMIQLDISHGYIFSLNFRIFETLQELKVLNLAYNKINSISRNA 331
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+Y L+ L+ L + N + + NY L + YI+L+ N I I + F F + K
Sbjct: 332 FY----GLDNLQVLNISYNLLGELYNYDFDGLPKVAYIDLQKNHIGIIQDKTFKF-LGK- 385
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQI 375
L + L +N L+ T Y L + I LS N L ++ N+ N + LS N++
Sbjct: 386 LNTLDLRDNALK-----TIYFLPSIPNIFLSGNKLMTLP-----NIPLTANFIQLSENRL 435
Query: 376 KYIYPNAFV-NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYEN- 432
+ + F+ +P+L L L N+ + N + S+ + + L L N + +E
Sbjct: 436 ENLNDLYFLLQVPHLQILILNQNRFSFCHQN---HAPSENSSLEKLFLGENMLQLAWETG 492
Query: 433 ---DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
D + +++ L L+ N + +P +LR L L N + L G+L
Sbjct: 493 SCWDIFKGLSHLQLLYLNKNYLNFLPPGVFHHLT-ALRGLSLKDNRLTVLFP---GDLPA 548
Query: 490 -LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
LE+L + N + F +L ID++ N
Sbjct: 549 NLEILDISGNQLLSPDPDLFA---SLSAIDITHN 579
Score = 123 (48.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 81/342 (23%), Positives = 147/342 (42%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQII-------ELNS--NVFDVFEKLQLL-EISFSLFNS 252
L FR+L +L L LS NK+Q + ELNS ++ F K+ ++ E F
Sbjct: 136 LKDGYFRNLASLTHLDLSKNKIQSLYLHPSFRELNSLKSIDFSFNKIPIVCEQEFKPLQG 195
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNIKN-IRNYSLYNL-TSLNY--INLEYNKISKIHNN- 307
+ L N +++D N N RN L L S N +++ N + I+ +
Sbjct: 196 KTLSFLSLADN-QLYSRVSVDWNKCLNPFRNMVLETLDVSGNGWGVDIMRNFSNAINGSQ 254
Query: 308 LFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL--SYNLLKSIKTTSFKNLNNM 365
+F + + + + L+ + TF L + I L S+ + S+ F+ L +
Sbjct: 255 IFSLVLTRHIMGSSFGFSNLKDPDYHTFAGLARSSMIQLDISHGYIFSLNFRIFETLQEL 314
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
+ L++N+I I NAF L NL L++ N L + F + ++L N+
Sbjct: 315 KVLNLAYNKINSISRNAFYGLDNLQVLNISYNLLGELYNYDFDGLPKVAY---IDLQKNH 371
Query: 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG 485
I + + K + +LDL +N ++ + F S+ ++L N++ L
Sbjct: 372 IGIIQDKTFKFLG-KLNTLDLRDNALKTI------YFLPSIPNIFLSGNKLMTLP----- 419
Query: 486 NLDVL-ELLSLEHNNIAVVVKRTFI-GMPNLQIIDLSFNEIS 525
N+ + + L N + + F+ +P+LQI+ L+ N S
Sbjct: 420 NIPLTANFIQLSENRLENLNDLYFLLQVPHLQILILNQNRFS 461
Score = 82 (33.9 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 33/129 (25%), Positives = 54/129 (41%)
Query: 2 TLDLSHNKLSVLNMATL-YSNVTKLQHLGTTILKGDQLQGIFNS--KLRELEITGKDLKF 58
+L LS N + + A+ + +L LGT + F + LR L++ G + F
Sbjct: 50 SLLLSFNYIRTVTTASFPFLEQLQLLELGTQFTPLTIYREAFRNLPNLRILDLGGSQINF 109
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATLY 117
+ P AF + L L L G F N+ +T LDLS NK+ L + +
Sbjct: 110 LHPDAFQGLPHLTKLRLFSCGLSDAVLKDGYF---RNLASLTHLDLSKNKIQSLYLHPSF 166
Query: 118 SNVTKLQHL 126
+ L+ +
Sbjct: 167 RELNSLKSI 175
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 180 (68.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 81/306 (26%), Positives = 145/306 (47%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ I LE N I I F + +++L+ I LSNN + I D F L+ LN++ L N
Sbjct: 310 TMTEIRLELNGIKSIPPGAF--SPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
+ + F L + ++L+ N+I I P+AF +L NL L L DNK++ F++
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 427
Query: 410 ITSKQTPMNLNLSNN-YIT--NL-YEND-KKQAPIYIKSLD------LSNNRIQEVPVNF 458
+ + QT L+L+ N +I NL + D + PI L+N RI ++
Sbjct: 428 LRAIQT---LHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKS-- 482
Query: 459 LQTFADSLRKLY-LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV-VKRTFIG--MPNL 514
+ F S ++ Y + E HL++ ++ E + + +K + I +P
Sbjct: 483 -KKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLKLSKIPERIPQS 541
Query: 515 QI-IDLSFNEISMLTGEQFYFSFK-LRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQ- 570
+ L+ NEIS+L + L+ +N+S+N++ + F T + +L ++ NQ
Sbjct: 542 TTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQL 601
Query: 571 DKIRPG 576
+ +R G
Sbjct: 602 ESVRSG 607
Score = 159 (61.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 47/167 (28%), Positives = 82/167 (49%)
Query: 262 KNL--NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
KN+ NT E L ++ NNI I L L + L N+I + F + K L+
Sbjct: 57 KNIPRNT-ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAF--DDMKELER 113
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+RL+ N L+++ F N + L+ + LS N L+++ +F+ ++ N+ L NQI I
Sbjct: 114 LRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIE 173
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
AF L L L L +N + ++ F+++ +T L +N++
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT---FRLHSNHL 217
Score = 159 (61.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 52/167 (31%), Positives = 81/167 (48%)
Query: 360 KNL-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPM 417
KN+ N + L+ N I I+ N F L L L L +N++ F ++ ++ +
Sbjct: 57 KNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRL 116
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
N N L++N+ QA + LDLS N +Q VP + D L+ L LD N+I
Sbjct: 117 NRNQLQVLPELLFQNN--QA---LSRLDLSENSLQAVPRKAFRGATD-LKNLQLDKNQIS 170
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ AF L LE+L+L +NNI + +F MP L+ L N +
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 151 (58.2 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 84/342 (24%), Positives = 149/342 (43%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
EL L+ N++ I+E + +F L+ + +S + + E + + ++ L + N
Sbjct: 544 ELRLNNNEISILEA-TGLFKKLSHLKKINLSNNKVSEIEDGTF---EGATSVSELHLTAN 599
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
++++R+ L L + L N+IS IHN+ F + RL + L +N++ I F
Sbjct: 600 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRL--LSLYDNHITTISPGAF 657
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLPNLVK-LD 393
L+ L+T+ NLL + F N N L + + + K + N P+ ++ +
Sbjct: 658 DTLQALSTL----NLLAN----PF-NCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIP 708
Query: 394 LQDNKLKDFNLNVFSN----ITSKQTPMNLNLSNNYI--TNLY-ENDKKQAPIYIKSLDL 446
LQD DF + Q P + + +N + + K P + L L
Sbjct: 709 LQDVAFPDFRCEEGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELYL 768
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
N+ VP L TF L+ + L N+I L ++F N+ L L L +N + +
Sbjct: 769 DGNQFTLVPGQ-LSTFK-YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPL 826
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F G+ +L+++ L N++S L F L L I N L
Sbjct: 827 AFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 868
Score = 149 (57.5 bits), Expect = 7.6e-16, Sum P(4) = 7.6e-16
Identities = 43/140 (30%), Positives = 73/140 (52%)
Query: 290 SLNYINLEYNKISKIH-NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
S + L N+IS + LF H LK+I LSNN + IE TF ++ + L+
Sbjct: 541 STTELRLNNNEISILEATGLFKKLSH--LKKINLSNNKVSEIEDGTFEGATSVSELHLTA 598
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L+S+++ F+ L+ + ++L N+I I+ ++F L N+ L L DN + + F
Sbjct: 599 NQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFD 658
Query: 409 NITSKQTPMNLNLSNNYITN 428
+ + T +NL L+N + N
Sbjct: 659 TLQALST-LNL-LANPFNCN 676
Score = 139 (54.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 37/133 (27%), Positives = 70/133 (52%)
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
Q+ L L+NN I+ L + ++K ++LSNN++ E+ + A S+ +L+L
Sbjct: 540 QSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEG-ATSVSELHLTA 598
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+++ + + F LD L L L +N I+ + +F G+ N++++ L N I+ ++ F
Sbjct: 599 NQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFD 658
Query: 534 FSFKLRILNISHN 546
L LN+ N
Sbjct: 659 TLQALSTLNLLAN 671
Score = 133 (51.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 413 KQTPMN---LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
K P N L L+ N IT +++ND ++ L L N+I V + L +L
Sbjct: 57 KNIPRNTERLELNGNNITRIHKNDFAGLK-QLRVLQLMENQIGAVERGAFDDMKE-LERL 114
Query: 470 YLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG 529
L+ N+++ L F N L L L N++ V ++ F G +L+ + L N+IS +
Sbjct: 115 RLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEE 174
Query: 530 EQFYFSFKLRILNISHNRLRSLPRDVFSN 558
F L +L +++N + ++P F++
Sbjct: 175 GAFRALRGLEVLTLNNNNITTIPVSSFNH 203
Score = 113 (44.8 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT ++ N F L L+ L L N++ +E + FD ++L+ L + N N+
Sbjct: 71 NNITRIHKNDFAGLKQLRVLQLMENQIGAVERGA--FDDMKELERLRL-----NRNQLQV 123
Query: 258 Y--ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+L +N L L + N+++ + + T L + L+ N+IS I F +
Sbjct: 124 LPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFR--ALR 181
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
L+ + L+NN + I +F ++ +L T L N L
Sbjct: 182 GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 100 (40.3 bits), Expect = 7.6e-16, Sum P(4) = 7.6e-16
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
SN +Q +P + ++ +LYLD N+ L L+L+ L +N I+ +
Sbjct: 748 SNKHLQALP----KGIPKNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNS 802
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLD 565
+F M L + LS+N + + F LR+L++ N + +L +F++ T + L
Sbjct: 803 SFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLA 862
Query: 566 ISYN 569
I N
Sbjct: 863 IGAN 866
Score = 100 (40.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 30/115 (26%), Positives = 58/115 (50%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIAV 502
++ S ++ ++P Q S +L L+ NEI L+AT F L L+ ++L +N ++
Sbjct: 524 VECSGLKLSKIPERIPQ----STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSE 579
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
+ TF G ++ + L+ N++ + F LR L + +NR+ + D F+
Sbjct: 580 IEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFT 634
Score = 100 (40.3 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N+ + + EIRL N ++ I F ++L I LS N + I +F+ L ++ ++VL
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I + F L L L L NK+ + F ++ Q L+L +N I +L +
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDL---QNLSLLSLYDNKIQSLAK 422
Query: 432 NDKKQAPIYIKSLDLSNN 449
I++L L+ N
Sbjct: 423 GTFTSLRA-IQTLHLAQN 439
Score = 97 (39.2 bits), Expect = 9.5e-13, Sum P(3) = 9.5e-13
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N IK+I + L I+L N+I++I + F + + L +
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQ-GL-RSLNSLV 363
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + I+ +F++L N+ + L N+I+ +
Sbjct: 364 LYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKG 423
Query: 382 AFVNLPNLVKLDLQDNK-LKDFNL 404
F +L + L L N + D NL
Sbjct: 424 TFTSLRAIQTLHLAQNPFICDCNL 447
Score = 97 (39.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 32/132 (24%), Positives = 62/132 (46%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+D + +P N +T + + L+ N IK + AF L + L +N IA +
Sbjct: 293 VDCRGKGLTAIPANLPETMTE----IRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEI 348
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
F G+ +L + L N+I+ L F + L++L ++ N++ + D F + ++
Sbjct: 349 APDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQD--LQN 406
Query: 564 LDI-SYNQDKIR 574
L + S +KI+
Sbjct: 407 LSLLSLYDNKIQ 418
Score = 90 (36.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLELL 493
++ P L L+NN I + L L+K+ L N++ + D T G V EL
Sbjct: 536 ERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSEL- 594
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + V F G+ L+ + L N IS + + F +R+L++ N + ++
Sbjct: 595 HLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 654
Query: 554 DVF 556
F
Sbjct: 655 GAF 657
Score = 87 (35.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 79/368 (21%), Positives = 146/368 (39%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGI----F--NSKLRELEITGKDL 56
L L N++ + + ++ +L+ L L +QLQ + F N L L+++ L
Sbjct: 90 LQLMENQIGAVERGA-FDDMKELERLR---LNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Query: 57 KFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLD---------LSHN 106
+ + AF DL L++ QI + G F + +E +TL+ S N
Sbjct: 146 QAVPRKAFRGAT---DLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN 202
Query: 107 KLSVLNMATLYSNVTKLQ-HLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKS 165
+ L L+SN HL R++ +C+ L G +QKS
Sbjct: 203 HMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT---QCSGPASLRGLNVAEVQKS 259
Query: 166 IVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHL-YNLQELSLSFNKL 224
+ QV N I D G + NL E +++ +L
Sbjct: 260 EFSC--SGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLTAIPANLPE-TMTEIRL 316
Query: 225 QIIELNS---NVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIR 281
++ + S F + KL+ +++S + + P + L +L L + N I ++
Sbjct: 317 ELNGIKSIPPGAFSPYRKLRRIDLSNNQI-AEIAPDAF--QGLRSLNSLVLYGNKITDLP 373
Query: 282 NYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKEL 341
L +L + L NKI+ I + F ++ + L + L +N ++ + TF +L+ +
Sbjct: 374 RGVFGGLYTLQLLLLNANKINCIRPDAFQ-DL-QNLSLLSLYDNKIQSLAKGTFTSLRAI 431
Query: 342 NTITLSYN 349
T+ L+ N
Sbjct: 432 QTLHLAQN 439
Score = 84 (34.6 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 24/106 (22%), Positives = 53/106 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ-GIFN--SKLRELEITGKDLKFI 59
L L++N++S+L L+ ++ L+ + + K +++ G F + + EL +T L+ +
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
F +D TL + N +I + + F + N+ ++L +H
Sbjct: 605 RSGMFRGLDGLR--TLMLRNNRISCIHNDSFTGLRNVRLLSLYDNH 648
Score = 83 (34.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+I+ L LF+ L +L++++LS NK+ E+ F+ + L ++ + S
Sbjct: 550 NEISILEATGLFKKLSHLKKINLSNNKVS--EIEDGTFEGATSVSELHLTANQLESVRSG 607
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + L+ L L + NN I I N S L ++ ++L N I+ I F
Sbjct: 608 MF---RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAF 657
Score = 71 (30.1 bits), Expect = 7.6e-16, Sum P(4) = 7.6e-16
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 30 TTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGL 89
T I K D G+ +LR L++ + ++ AFD++ L++ Q++ LP L
Sbjct: 74 TRIHKND-FAGL--KQLRVLQLMENQIGAVERGAFDDMKELE--RLRLNRNQLQVLPELL 128
Query: 90 FDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
F + + + LDLS N L + + T L++L
Sbjct: 129 FQNNQALSR--LDLSENSLQAVPRKA-FRGATDLKNL 162
Score = 69 (29.3 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 30/102 (29%), Positives = 47/102 (46%)
Query: 29 GTTI-LKGDQLQGIFNSKLRE---LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEE 84
GTT+ G LQ I + R LE+ G ++ I + F + L++ QI
Sbjct: 42 GTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLR--VLQLMENQIGA 99
Query: 85 LPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ G FD ++ +E+ L L+ N+L VL L+ N L L
Sbjct: 100 VERGAFDDMKELER--LRLNRNQLQVLP-ELLFQNNQALSRL 138
Score = 68 (29.0 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 25/105 (23%), Positives = 44/105 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
NK++++ F S+ + N E S + R N+I+ ++ + F
Sbjct: 575 NKVSEIEDGTFEGAT-SVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSF 633
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
L N++ LSL N I ++ FD + L L + + FN N
Sbjct: 634 TGLRNVRLLSLYDN--HITTISPGAFDTLQALSTLNLLANPFNCN 676
Score = 60 (26.2 bits), Expect = 7.6e-16, Sum P(4) = 7.6e-16
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
NKI + + F+ L NL LSL NK+Q L F +Q L ++ + F
Sbjct: 391 NKINCIRPDAFQDLQNLSLLSLYDNKIQ--SLAKGTFTSLRAIQTLHLAQNPF 441
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 180 (68.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 81/306 (26%), Positives = 145/306 (47%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ I LE N I I F + +++L+ I LSNN + I D F L+ LN++ L N
Sbjct: 310 TMTEIRLELNGIKSIPPGAF--SPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
+ + F L + ++L+ N+I I P+AF +L NL L L DNK++ F++
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 427
Query: 410 ITSKQTPMNLNLSNN-YIT--NL-YEND-KKQAPIYIKSLD------LSNNRIQEVPVNF 458
+ + QT L+L+ N +I NL + D + PI L+N RI ++
Sbjct: 428 LRAIQT---LHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKS-- 482
Query: 459 LQTFADSLRKLY-LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV-VKRTFIG--MPNL 514
+ F S ++ Y + E HL++ ++ E + + +K + I +P
Sbjct: 483 -KKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLKLSKIPERIPQS 541
Query: 515 QI-IDLSFNEISMLTGEQFYFSFK-LRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQ- 570
+ L+ NEIS+L + L+ +N+S+N++ + F T + +L ++ NQ
Sbjct: 542 TTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQL 601
Query: 571 DKIRPG 576
+ +R G
Sbjct: 602 ESVRSG 607
Score = 159 (61.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 47/167 (28%), Positives = 82/167 (49%)
Query: 262 KNL--NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
KN+ NT E L ++ NNI I L L + L N+I + F + K L+
Sbjct: 57 KNIPRNT-ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAF--DDMKELER 113
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+RL+ N L+++ F N + L+ + LS N L+++ +F+ ++ N+ L NQI I
Sbjct: 114 LRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIE 173
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
AF L L L L +N + ++ F+++ +T L +N++
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT---FRLHSNHL 217
Score = 159 (61.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 52/167 (31%), Positives = 81/167 (48%)
Query: 360 KNL-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPM 417
KN+ N + L+ N I I+ N F L L L L +N++ F ++ ++ +
Sbjct: 57 KNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRL 116
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
N N L++N+ QA + LDLS N +Q VP + D L+ L LD N+I
Sbjct: 117 NRNQLQVLPELLFQNN--QA---LSRLDLSENSLQAVPRKAFRGATD-LKNLQLDKNQIS 170
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ AF L LE+L+L +NNI + +F MP L+ L N +
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 151 (58.2 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 84/342 (24%), Positives = 149/342 (43%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
EL L+ N++ I+E + +F L+ + +S + + E + + ++ L + N
Sbjct: 544 ELRLNNNEISILEA-TGLFKKLSHLKKINLSNNKVSEIEDGTF---EGATSVSELHLTAN 599
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
++++R+ L L + L N+IS IHN+ F + RL + L +N++ I F
Sbjct: 600 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRL--LSLYDNHITTISPGAF 657
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLPNLVK-LD 393
L+ L+T+ NLL + F N N L + + + K + N P+ ++ +
Sbjct: 658 DTLQALSTL----NLLAN----PF-NCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIP 708
Query: 394 LQDNKLKDFNLNVFSN----ITSKQTPMNLNLSNNYI--TNLY-ENDKKQAPIYIKSLDL 446
LQD DF + Q P + + +N + + K P + L L
Sbjct: 709 LQDVAFPDFRCEEGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELYL 768
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
N+ VP L TF L+ + L N+I L ++F N+ L L L +N + +
Sbjct: 769 DGNQFTLVPGQ-LSTFK-YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPL 826
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F G+ +L+++ L N++S L F L L I N L
Sbjct: 827 AFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 868
Score = 149 (57.5 bits), Expect = 7.6e-16, Sum P(4) = 7.6e-16
Identities = 43/140 (30%), Positives = 73/140 (52%)
Query: 290 SLNYINLEYNKISKIH-NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
S + L N+IS + LF H LK+I LSNN + IE TF ++ + L+
Sbjct: 541 STTELRLNNNEISILEATGLFKKLSH--LKKINLSNNKVSEIEDGTFEGATSVSELHLTA 598
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L+S+++ F+ L+ + ++L N+I I+ ++F L N+ L L DN + + F
Sbjct: 599 NQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFD 658
Query: 409 NITSKQTPMNLNLSNNYITN 428
+ + T +NL L+N + N
Sbjct: 659 TLQALST-LNL-LANPFNCN 676
Score = 139 (54.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 37/133 (27%), Positives = 70/133 (52%)
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
Q+ L L+NN I+ L + ++K ++LSNN++ E+ + A S+ +L+L
Sbjct: 540 QSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEG-ATSVSELHLTA 598
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+++ + + F LD L L L +N I+ + +F G+ N++++ L N I+ ++ F
Sbjct: 599 NQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFD 658
Query: 534 FSFKLRILNISHN 546
L LN+ N
Sbjct: 659 TLQALSTLNLLAN 671
Score = 133 (51.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 413 KQTPMN---LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
K P N L L+ N IT +++ND ++ L L N+I V + L +L
Sbjct: 57 KNIPRNTERLELNGNNITRIHKNDFAGLK-QLRVLQLMENQIGAVERGAFDDMKE-LERL 114
Query: 470 YLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG 529
L+ N+++ L F N L L L N++ V ++ F G +L+ + L N+IS +
Sbjct: 115 RLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEE 174
Query: 530 EQFYFSFKLRILNISHNRLRSLPRDVFSN 558
F L +L +++N + ++P F++
Sbjct: 175 GAFRALRGLEVLTLNNNNITTIPVSSFNH 203
Score = 113 (44.8 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT ++ N F L L+ L L N++ +E + FD ++L+ L + N N+
Sbjct: 71 NNITRIHKNDFAGLKQLRVLQLMENQIGAVERGA--FDDMKELERLRL-----NRNQLQV 123
Query: 258 Y--ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+L +N L L + N+++ + + T L + L+ N+IS I F +
Sbjct: 124 LPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFR--ALR 181
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
L+ + L+NN + I +F ++ +L T L N L
Sbjct: 182 GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 100 (40.3 bits), Expect = 7.6e-16, Sum P(4) = 7.6e-16
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
SN +Q +P + ++ +LYLD N+ L L+L+ L +N I+ +
Sbjct: 748 SNKHLQALP----KGIPKNVTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNS 802
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLD 565
+F M L + LS+N + + F LR+L++ N + +L +F++ T + L
Sbjct: 803 SFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLA 862
Query: 566 ISYN 569
I N
Sbjct: 863 IGAN 866
Score = 100 (40.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 30/115 (26%), Positives = 58/115 (50%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIAV 502
++ S ++ ++P Q S +L L+ NEI L+AT F L L+ ++L +N ++
Sbjct: 524 VECSGLKLSKIPERIPQ----STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSE 579
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
+ TF G ++ + L+ N++ + F LR L + +NR+ + D F+
Sbjct: 580 IEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFT 634
Score = 100 (40.3 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N+ + + EIRL N ++ I F ++L I LS N + I +F+ L ++ ++VL
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I + F L L L L NK+ + F ++ Q L+L +N I +L +
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDL---QNLSLLSLYDNKIQSLAK 422
Query: 432 NDKKQAPIYIKSLDLSNN 449
I++L L+ N
Sbjct: 423 GTFTSLRA-IQTLHLAQN 439
Score = 97 (39.2 bits), Expect = 9.5e-13, Sum P(3) = 9.5e-13
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N IK+I + L I+L N+I++I + F + + L +
Sbjct: 306 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQ-GL-RSLNSLV 363
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + I+ +F++L N+ + L N+I+ +
Sbjct: 364 LYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKG 423
Query: 382 AFVNLPNLVKLDLQDNK-LKDFNL 404
F +L + L L N + D NL
Sbjct: 424 TFTSLRAIQTLHLAQNPFICDCNL 447
Score = 97 (39.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 32/132 (24%), Positives = 62/132 (46%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+D + +P N +T + + L+ N IK + AF L + L +N IA +
Sbjct: 293 VDCRGKGLTAIPANLPETMTE----IRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEI 348
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
F G+ +L + L N+I+ L F + L++L ++ N++ + D F + ++
Sbjct: 349 APDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQD--LQN 406
Query: 564 LDI-SYNQDKIR 574
L + S +KI+
Sbjct: 407 LSLLSLYDNKIQ 418
Score = 90 (36.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLELL 493
++ P L L+NN I + L L+K+ L N++ + D T G V EL
Sbjct: 536 ERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSEL- 594
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + V F G+ L+ + L N IS + + F +R+L++ N + ++
Sbjct: 595 HLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 654
Query: 554 DVF 556
F
Sbjct: 655 GAF 657
Score = 87 (35.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 79/368 (21%), Positives = 146/368 (39%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGI----F--NSKLRELEITGKDL 56
L L N++ + + ++ +L+ L L +QLQ + F N L L+++ L
Sbjct: 90 LQLMENQIGAVERGA-FDDMKELERLR---LNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Query: 57 KFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLD---------LSHN 106
+ + AF DL L++ QI + G F + +E +TL+ S N
Sbjct: 146 QAVPRKAFRGAT---DLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN 202
Query: 107 KLSVLNMATLYSNVTKLQ-HLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKS 165
+ L L+SN HL R++ +C+ L G +QKS
Sbjct: 203 HMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT---QCSGPASLRGLNVAEVQKS 259
Query: 166 IVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHL-YNLQELSLSFNKL 224
+ QV N I D G + NL E +++ +L
Sbjct: 260 EFSC--SGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLTAIPANLPE-TMTEIRL 316
Query: 225 QIIELNS---NVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIR 281
++ + S F + KL+ +++S + + P + L +L L + N I ++
Sbjct: 317 ELNGIKSIPPGAFSPYRKLRRIDLSNNQI-AEIAPDAF--QGLRSLNSLVLYGNKITDLP 373
Query: 282 NYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKEL 341
L +L + L NKI+ I + F ++ + L + L +N ++ + TF +L+ +
Sbjct: 374 RGVFGGLYTLQLLLLNANKINCIRPDAFQ-DL-QNLSLLSLYDNKIQSLAKGTFTSLRAI 431
Query: 342 NTITLSYN 349
T+ L+ N
Sbjct: 432 QTLHLAQN 439
Score = 84 (34.6 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 24/106 (22%), Positives = 53/106 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ-GIFN--SKLRELEITGKDLKFI 59
L L++N++S+L L+ ++ L+ + + K +++ G F + + EL +T L+ +
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
F +D TL + N +I + + F + N+ ++L +H
Sbjct: 605 RSGMFRGLDGLR--TLMLRNNRISCIHNDSFTGLRNVRLLSLYDNH 648
Score = 83 (34.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+I+ L LF+ L +L++++LS NK+ E+ F+ + L ++ + S
Sbjct: 550 NEISILEATGLFKKLSHLKKINLSNNKVS--EIEDGTFEGATSVSELHLTANQLESVRSG 607
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + L+ L L + NN I I N S L ++ ++L N I+ I F
Sbjct: 608 MF---RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAF 657
Score = 71 (30.1 bits), Expect = 7.6e-16, Sum P(4) = 7.6e-16
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 30 TTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGL 89
T I K D G+ +LR L++ + ++ AFD++ L++ Q++ LP L
Sbjct: 74 TRIHKND-FAGL--KQLRVLQLMENQIGAVERGAFDDMKELE--RLRLNRNQLQVLPELL 128
Query: 90 FDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
F + + + LDLS N L + + T L++L
Sbjct: 129 FQNNQALSR--LDLSENSLQAVPRKA-FRGATDLKNL 162
Score = 69 (29.3 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 30/102 (29%), Positives = 47/102 (46%)
Query: 29 GTTI-LKGDQLQGIFNSKLRE---LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEE 84
GTT+ G LQ I + R LE+ G ++ I + F + L++ QI
Sbjct: 42 GTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLR--VLQLMENQIGA 99
Query: 85 LPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ G FD ++ +E+ L L+ N+L VL L+ N L L
Sbjct: 100 VERGAFDDMKELER--LRLNRNQLQVLP-ELLFQNNQALSRL 138
Score = 68 (29.0 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 25/105 (23%), Positives = 44/105 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
NK++++ F S+ + N E S + R N+I+ ++ + F
Sbjct: 575 NKVSEIEDGTFEGAT-SVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSF 633
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
L N++ LSL N I ++ FD + L L + + FN N
Sbjct: 634 TGLRNVRLLSLYDN--HITTISPGAFDTLQALSTLNLLANPFNCN 676
Score = 60 (26.2 bits), Expect = 7.6e-16, Sum P(4) = 7.6e-16
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
NKI + + F+ L NL LSL NK+Q L F +Q L ++ + F
Sbjct: 391 NKINCIRPDAFQDLQNLSLLSLYDNKIQ--SLAKGTFTSLRAIQTLHLAQNPF 441
>UNIPROTKB|F1SMW1 [details] [associations]
symbol:PHLPP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009649 "entrainment of circadian clock" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001849 InterPro:IPR001932 Pfam:PF00481 PROSITE:PS50003
PROSITE:PS51450 SMART:SM00233 SMART:SM00332 GO:GO:0003824
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0009649
GO:GO:0008152 Gene3D:3.60.40.10 SUPFAM:SSF81606
GeneTree:ENSGT00440000037833 CTD:23239 KO:K16340 OMA:CCELSAG
EMBL:CU459053 RefSeq:XP_001925065.4 Ensembl:ENSSSCT00000005402
GeneID:100154633 KEGG:ssc:100154633 Uniprot:F1SMW1
Length = 1192
Score = 242 (90.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 99/393 (25%), Positives = 193/393 (49%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQ---IIELNSNVFDV--FEKLQLLEISFSLFN 251
C + L NLF + +L L+L N L+ + + ++ F KL+ L +S + +
Sbjct: 130 CCSLEHLPANLF-YSQDLTHLNLKQNFLRQNPSLPTARGLSELQRFTKLKSLNLSNN--H 186
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+FP + N + TL L + N ++ + ++ + +L L+ N + + L
Sbjct: 187 LGDFPLAVCN--IPTLAELNVSCNALQTVPA-AVGVMHNLQTFLLDGNFLQTLPAELE-- 241
Query: 312 NIHKRLKEIRLS-NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
NIH+ L + LS N + ++ E L ++ + +S N +++++ + + + ++ ++ L
Sbjct: 242 NIHQ-LSYLGLSFNEFTDIPE--VLEKLTAVDKLCMSGNCMETLRLQALRKMPHIKHVDL 298
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN----LNLSNNYI 426
N I+ + + LP++ +LDL+DNKL D + VF+NI N LN+ ++
Sbjct: 299 RLNLIRKLIADEVDFLPHVTQLDLRDNKLGDLDAMVFNNIEVLHCERNQLVTLNICGYFL 358
Query: 427 TNLY--ENDKKQ-----APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
LY N+ Q P Y+ +D+S NR++ VP + L L + N+I L
Sbjct: 359 KALYASSNELVQLDVYPVPNYLSYMDVSRNRLENVPEWVCE--GRKLEVLDIGHNQICEL 416
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
A+ F N + +LL+ HN + + +R + +++++D+ N++ L + LR
Sbjct: 417 PASLFCNSSLRKLLA-GHNQLTRLPER--LERTSVEVLDVQHNQLLELPPNLLMKADSLR 473
Query: 540 ILNISHNRLRSLPRDVFS---NTIIEKLDISYN 569
LN S N+L +LP S N+I+++L ++ N
Sbjct: 474 FLNASANKLETLPPATLSEETNSILQELYLTNN 506
Score = 212 (79.7 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 89/365 (24%), Positives = 177/365 (48%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
++NLQ L N LQ + + +L L +SF+ F + P +L K L ++ L
Sbjct: 220 MHNLQTFLLDGNFLQTLPAE---LENIHQLSYLGLSFNEFT--DIPE-VLEK-LTAVDKL 272
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
M N ++ +R +L + + +++L N I K+ + F H + ++ L +N L +
Sbjct: 273 CMSGNCMETLRLQALRKMPHIKHVDLRLNLIRKLIADEVDFLPH--VTQLDLRDNKLGDL 330
Query: 331 ESDTFYNLKELN-------TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY--IYPN 381
++ F N++ L+ T+ + LK++ +S N L++ N + Y + N
Sbjct: 331 DAMVFNNIEVLHCERNQLVTLNICGYFLKALYASS--NELVQLDVYPVPNYLSYMDVSRN 388
Query: 382 AFVNLPNLV----KLDLQD---NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
N+P V KL++ D N++ + ++F N + ++ L +N +T L E +
Sbjct: 389 RLENVPEWVCEGRKLEVLDIGHNQICELPASLFCNSSLRK----LLAGHNQLTRLPERLE 444
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD-ATAFGNLD-VLEL 492
+ + ++ LD+ +N++ E+P N L ADSLR L N+++ L AT + +L+
Sbjct: 445 RTS---VEVLDVQHNQLLELPPNLLMK-ADSLRFLNASANKLETLPPATLSEETNSILQE 500
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L L +NN+ G P L+I+ +++N + + +L ++IS N+L+++P
Sbjct: 501 LYLTNNNLTDKCVHLLTGHPRLKILHMAYNRLQSFPASKMAKLEELEEIDISGNKLKAIP 560
Query: 553 RDVFS 557
+ +
Sbjct: 561 TTIMN 565
Score = 169 (64.5 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 84/324 (25%), Positives = 132/324 (40%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYS-LYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+LN + N ++ R S L T L +NL N + L NI L E+
Sbjct: 148 HLNLKQNFLRQNPSLPTARGLSELQRFTKLKSLNLSNNHLGDFP--LAVCNI-PTLAELN 204
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
+S N L+ + + + L T L N L+++ +N++ + + LSFN+ I P
Sbjct: 205 VSCNALQTVPAAVGV-MHNLQTFLLDGNFLQTLPA-ELENIHQLSYLGLSFNEFTDI-PE 261
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLNLSNN----------YITNLY 430
L + KL + N ++ L + K + LNL ++T L
Sbjct: 262 VLEKLTAVDKLCMSGNCMETLRLQALRKMPHIKHVDLRLNLIRKLIADEVDFLPHVTQLD 321
Query: 431 ENDKK----QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGN 486
D K A ++ L R Q V +N F L+ LY NE+ LD N
Sbjct: 322 LRDNKLGDLDAMVFNNIEVLHCERNQLVTLNICGYF---LKALYASSNELVQLDVYPVPN 378
Query: 487 LDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
L + + N + V + G L+++D+ N+I L F S LR L HN
Sbjct: 379 Y--LSYMDVSRNRLENVPEWVCEGR-KLEVLDIGHNQICELPASLFCNS-SLRKLLAGHN 434
Query: 547 RLRSLPRDVFSNTIIEKLDISYNQ 570
+L LP + T +E LD+ +NQ
Sbjct: 435 QLTRLPERL-ERTSVEVLDVQHNQ 457
Score = 165 (63.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 76/307 (24%), Positives = 141/307 (45%)
Query: 284 SLYNLTSLNYINLEYNKISK-----IHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
+L+ L ++NL+ N + + L +LK + LSNN+L N+
Sbjct: 139 NLFYSQDLTHLNLKQNFLRQNPSLPTARGLSELQRFTKLKSLNLSNNHLGDFPL-AVCNI 197
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
L + +S N L+++ + ++N+ +L N ++ + P N+ L L L N+
Sbjct: 198 PTLAELNVSCNALQTVPA-AVGVMHNLQTFLLDGNFLQTL-PAELENIHQLSYLGLSFNE 255
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNF 458
D V +T+ L +S N + L ++ P +IK +DL N I+++ +
Sbjct: 256 FTDIP-EVLEKLTAVD---KLCMSGNCMETLRLQALRKMP-HIKHVDLRLNLIRKLIADE 310
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVL-----ELLSLE---------HNNIAVVV 504
+ F + +L L N++ LDA F N++VL +L++L + + +V
Sbjct: 311 VD-FLPHVTQLDLRDNKLGDLDAMVFNNIEVLHCERNQLVTLNICGYFLKALYASSNELV 369
Query: 505 KRTFIGMPN-LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
+ +PN L +D+S N + + E KL +L+I HN++ LP +F N+ + K
Sbjct: 370 QLDVYPVPNYLSYMDVSRNRLENVP-EWVCEGRKLEVLDIGHNQICELPASLFCNSSLRK 428
Query: 564 LDISYNQ 570
L +NQ
Sbjct: 429 LLAGHNQ 435
Score = 126 (49.4 bits), Expect = 0.00039, P = 0.00039
Identities = 55/262 (20%), Positives = 119/262 (45%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L+ L +N + + Y + N L+Y+++ N++ + + ++L+ + + +N
Sbjct: 358 LKALYASSNELVQLDVYPVPNY--LSYMDVSRNRLENVPEWVCE---GRKLEVLDIGHNQ 412
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
+ + + F N L + +N L + + +L++ NQ+ + PN +
Sbjct: 413 ICELPASLFCN-SSLRKLLAGHNQLTRLPERLERTSVEVLDV--QHNQLLELPPNLLMKA 469
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
+L L+ NKL+ S T+ L L+NN +T+ + P +K L +
Sbjct: 470 DSLRFLNASANKLETLPPATLSEETNSIL-QELYLTNNNLTDKCVHLLTGHP-RLKILHM 527
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
+ NR+Q P + + + L ++ + N++K + T N + + + H+N V
Sbjct: 528 AYNRLQSFPASKMAKL-EELEEIDISGNKLKAIPTTIM-NCRRMHTV-IAHSNCIEVFPE 584
Query: 507 TFIGMPNLQIIDLSFNEISMLT 528
+ +P ++ +DLS NE+S +T
Sbjct: 585 V-MQLPEIKCVDLSCNELSEVT 605
>MGI|MGI:2679446 [details] [associations]
symbol:Slitrk1 "SLIT and NTRK-like family, member 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007399 "nervous system development" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=ISS]
[GO:0030534 "adult behavior" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042592
"homeostatic process" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2679446 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GO:GO:0030534 GO:GO:0035264 InterPro:IPR000372 SMART:SM00013
GO:GO:0042592 CTD:114798 eggNOG:NOG236179 HOVERGEN:HBG056407
OMA:NGLPCPG OrthoDB:EOG428211 EMBL:AB097570 EMBL:AK014285
IPI:IPI00110451 RefSeq:NP_951020.1 UniGene:Mm.257268
ProteinModelPortal:Q810C1 SMR:Q810C1 STRING:Q810C1
PhosphoSite:Q810C1 PaxDb:Q810C1 PRIDE:Q810C1
Ensembl:ENSMUST00000100322 GeneID:76965 KEGG:mmu:76965
GeneTree:ENSGT00680000099775 InParanoid:Q810C1 ChiTaRS:SLITRK1
NextBio:346195 Bgee:Q810C1 CleanEx:MM_SLITRK1 Genevestigator:Q810C1
GermOnline:ENSMUSG00000075478 Uniprot:Q810C1
Length = 696
Score = 170 (64.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 46/157 (29%), Positives = 81/157 (51%)
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N N+ ++ + L+++ + L NKI I + HF +K L + L NN + IE+
Sbjct: 360 NNRNVSSLADLKP-KLSNVQELFLRDNKIHSIRKS--HFVDYKNLILLDLGNNNIANIEN 416
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
+TF NL +L + + N L ++ F L N+ + + +N I+ I P F +P L L
Sbjct: 417 NTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNAMPKLRIL 476
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L +N L+ ++VF+ ++ + L+L NNY L
Sbjct: 477 ILNNNLLRSLPVDVFAGVSLSK----LSLHNNYFMYL 509
Score = 166 (63.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 45/155 (29%), Positives = 80/155 (51%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--N 474
+ +N +N +++L D K ++ L L +N+I + + F D + LD N
Sbjct: 355 LKMNCNNRNVSSLA--DLKPKLSNVQELFLRDNKIHSIRKSH---FVDYKNLILLDLGNN 409
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
I +++ F NL L L ++ N + + + F G+ NL+ +++ +N I ++ F
Sbjct: 410 NIANIENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNA 469
Query: 535 SFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
KLRIL +++N LRSLP DVF+ + KL + N
Sbjct: 470 MPKLRILILNNNLLRSLPVDVFAGVSLSKLSLHNN 504
Score = 144 (55.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 197 CNK--ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
CN ++ L +L L N+QEL L NK+ I S+ D ++ L LL++ + + E
Sbjct: 359 CNNRNVSSL-ADLKPKLSNVQELFLRDNKIHSIR-KSHFVD-YKNLILLDLGNNNIANIE 415
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
+ KNL L WL MD+N + + L +L Y+N+EYN I I F N
Sbjct: 416 NNTF---KNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTF--NAM 470
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVLSFN 373
+L+ + L+NN L + D F + L+ ++L N + L +++ I L N
Sbjct: 471 PKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQLTSIIQIDLHGN 529
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + + N F +++ L+++ N + + AF L +++ L + +N I
Sbjct: 63 LFLHGNSLTRLFPNEFANFYNAV-SLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSF 121
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
K+TF+G+ +L+ + FN + + F KL +L ++ N + +LP +VF I
Sbjct: 122 RKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVPITH 181
Query: 564 LDISYNQDKIRPGRE 578
LD+ N+ K P E
Sbjct: 182 LDLRGNRLKTLPYEE 196
Score = 123 (48.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 40/148 (27%), Positives = 72/148 (48%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N ++++ N F N + + + + NN L I F L+ + + ++ N +K
Sbjct: 62 HLFLHGNSLTRLFPNEFA-NFYNAVS-LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIK 119
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
S + +F L+++ + FN ++ I P AF +L L L L DN + NVF +
Sbjct: 120 SFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYV-- 177
Query: 413 KQTPM-NLNLSNNYITNL-YENDKKQAP 438
P+ +L+L N + L YE +Q P
Sbjct: 178 ---PITHLDLRGNRLKTLPYEEVLEQIP 202
Score = 96 (38.9 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L M+NN + I + L + +++ NKI F + L+ ++ N L
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTF-LGLDD-LEYLQADFNLLRD 144
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFVNLPN 388
I+ F +L +L + L+ NL+ ++ F+ + + ++ L N++K + Y +P
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 389 LVKLDLQDN 397
+ ++ L+DN
Sbjct: 204 IAEILLEDN 212
Score = 81 (33.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 22/91 (24%), Positives = 48/91 (52%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L ++ L ++NN IK+ R + L L Y+ ++N + I F +++K L+ + L+
Sbjct: 105 LQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQ-DLNK-LEVLILN 162
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+N + + ++ F + + + L N LK++
Sbjct: 163 DNLISTLPANVFQYVP-ITHLDLRGNRLKTL 192
Score = 66 (28.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 1 MTLDLSHNKL-SVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKD---L 56
++L + +N L ++ A L + K H+ +K + Q L +LE D L
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLG--LDDLEYLQADFNLL 142
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
+ IDP AF +++ L L + I LP+ +F + LDL N+L L
Sbjct: 143 RDIDPGAFQDLNKLEVLILN--DNLISTLPANVFQYVPITH---LDLRGNRLKTL 192
Score = 58 (25.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T L N F + ++ +NN +E V NKI F
Sbjct: 68 NSLTRLFPNEFANFYNAVSLHMENNGLHEI-VPGAFLGLQLVKRLHINNNKIKSFRKQTF 126
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS---NEFPY 257
L +L+ L FN L+ +++ F KL++L ++ +L ++ N F Y
Sbjct: 127 LGLDDLEYLQADFNLLR--DIDPGAFQDLNKLEVLILNDNLISTLPANVFQY 176
>UNIPROTKB|O94991 [details] [associations]
symbol:SLITRK5 "SLIT and NTRK-like protein 5" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471085
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 eggNOG:NOG147171 EMBL:AB020725 EMBL:AK024251
EMBL:AL603883 EMBL:BC098106 EMBL:BC103509 IPI:IPI00016679
RefSeq:NP_056382.1 UniGene:Hs.591208 ProteinModelPortal:O94991
SMR:O94991 STRING:O94991 PhosphoSite:O94991 PaxDb:O94991
PRIDE:O94991 Ensembl:ENST00000325089 GeneID:26050 KEGG:hsa:26050
UCSC:uc001vln.3 CTD:26050 GeneCards:GC13P088324 HGNC:HGNC:20295
HPA:HPA013843 MIM:609680 neXtProt:NX_O94991 PharmGKB:PA134885524
InParanoid:O94991 OMA:HHRGPAL OrthoDB:EOG4X97GH PhylomeDB:O94991
GenomeRNAi:26050 NextBio:47908 ArrayExpress:O94991 Bgee:O94991
CleanEx:HS_SLITRK5 Genevestigator:O94991 GermOnline:ENSG00000165300
Uniprot:O94991
Length = 958
Score = 160 (61.4 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 47/160 (29%), Positives = 82/160 (51%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNE 475
+ ++ N I +L E + PIY L LS N + + P F+ S+ L+L N
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIY--HLLLSGNLLNRLYPNEFVNYTGASI--LHLGSNV 116
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
I+ ++ AF L L L L +N + ++ TF+G+ NL+ + + +N IS++ F
Sbjct: 117 IQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKL 176
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
L++L ++ N L SLP ++F + LD+ N+ K+ P
Sbjct: 177 HLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLP 216
Score = 154 (59.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N + + N T + ++L N I I FH + + L+ + L+NN LEL
Sbjct: 86 LLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFH-GL-RGLRRLHLNNNKLEL 143
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + + YN + I+ +F L+ + ++L+ N + + N F +P L
Sbjct: 144 LRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-L 202
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 203 THLDLRGNRLK 213
Score = 139 (54.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 47/162 (29%), Positives = 77/162 (47%)
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLR 467
N+ +N+N I ++ E K P K + L+ N I V +FL+ A L
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPK--PYNPKKMYLTENYIAVVRRTDFLE--ATGLD 436
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L+L N I + AFG+L L L L N I + F G+ +LQ + L +N I +
Sbjct: 437 LLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREI 496
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N L+++P VFS + +L++ N
Sbjct: 497 QSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTLLRLNLRSN 538
Score = 133 (51.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 38/153 (24%), Positives = 79/153 (51%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N I +R T L+ ++L N+IS I + F ++ L+ + L+ N +E +
Sbjct: 416 LTENYIAVVRRTDFLEATGLDLLHLGNNRISMIQDRAFG-DL-TNLRRLYLNGNRIERLS 473
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
+ FY L+ L + L YNL++ I++ +F + N+ + L+ N ++ + F L L++
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGL-TLLR 532
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L+L+ N +L V + ++ + ++L +N
Sbjct: 533 LNLRSNHFT--SLPVSGVLDQLKSLIQIDLHDN 563
Score = 131 (51.2 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 42/154 (27%), Positives = 76/154 (49%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N L + + F N + + L N+++ I+T +F L + + L+ N+++ + +
Sbjct: 88 LSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDD 147
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F+ L NL L + N + N F + Q L L++N +++L N + P+
Sbjct: 148 TFLGLENLEYLQVDYNYISVIEPNAFGKLHLLQV---LILNDNLLSSLPNNLFRFVPL-- 202
Query: 442 KSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFN 474
LDL NR++ +P V LQ D + +L L+ N
Sbjct: 203 THLDLRGNRLKLLPYVGLLQHM-DKVVELQLEEN 235
Score = 127 (49.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L NN + +I+ F +L L + L+ N ++ + F L ++ + L +N I+ I
Sbjct: 438 LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQ 497
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
F +PNL L L +N L+ VFS +T + LNL +N+ T+L
Sbjct: 498 SGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTL----LRLNLRSNHFTSL 543
Score = 124 (48.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/115 (29%), Positives = 60/115 (52%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N +++++ N F N + + L +N ++ IE+ F+ L+ L + L+ N L+
Sbjct: 85 HLLLSGNLLNRLYPNEF-VN-YTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F L N+ + + +N I I PNAF L L L L DN L N+F
Sbjct: 143 LLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLF 197
Score = 102 (41.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 50/188 (26%), Positives = 85/188 (45%)
Query: 197 CN-KITDLNGNLF---RHLYNLQELSLS-FNKLQIIELNSNVFDVFEKLQLLEIS-FSLF 250
CN +I+DL N+ R + ++ EL +N ++ L N V + LE + L
Sbjct: 380 CNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMY-LTENYIAVVRRTDFLEATGLDLL 438
Query: 251 N-SNEFPYYILNK---NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN 306
+ N I ++ +L L L ++ N I+ + Y L SL Y+ L+YN I +I +
Sbjct: 439 HLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQS 498
Query: 307 NLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNM 365
F + L+ + L+NN L+ + S F L L + L N S+ + L ++
Sbjct: 499 GTF--DPVPNLQLLFLNNNLLQAMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLDQLKSL 555
Query: 366 LNIVLSFN 373
+ I L N
Sbjct: 556 IQIDLHDN 563
Score = 95 (38.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 39/163 (23%), Positives = 75/163 (46%)
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
+ + L LS N L L N F + +L + ++ E + L L L
Sbjct: 81 FPIYHLLLSGNLLN--RLYPNEFVNYTGASILHLGSNVIQDIETGAF---HGLRGLRRLH 135
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
++NN ++ +R+ + L +L Y+ ++YN IS I N F +H L+ + L++N L +
Sbjct: 136 LNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFG-KLHL-LQVLILNDNLLSSLP 193
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSF-KNLNNMLNIVLSFN 373
++ F L + L N LK + ++++ ++ + L N
Sbjct: 194 NNLF-RFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN 235
Score = 89 (36.4 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 28/104 (26%), Positives = 55/104 (52%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I D+ F L L+ L L+ NKL++ L + F E L+ L++ ++ + E P
Sbjct: 115 NVIQDIETGAFHGLRGLRRLHLNNNKLEL--LRDDTFLGLENLEYLQVDYNYISVIE-PN 171
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
K L+ L+ L +++N + ++ N +L+ L +++L N++
Sbjct: 172 -AFGK-LHLLQVLILNDNLLSSLPN-NLFRFVPLTHLDLRGNRL 212
Score = 69 (29.3 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 18 LYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKI 77
L+ N KL+ +L+ D G+ N L L++ + I+P+AF + L L
Sbjct: 134 LHLNNNKLE-----LLRDDTFLGLEN--LEYLQVDYNYISVIEPNAFGKLHLLQVLILN- 185
Query: 78 TNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ + LP+ LF + LDL N+L +L L ++ K+ L
Sbjct: 186 -DNLLSSLPNNLF---RFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVEL 230
Score = 56 (24.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/115 (20%), Positives = 55/115 (47%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L +S +++++ + + HL +L G+ L ++ ++ + TG + + +
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIYHL---LLSGNLLNRLYPNEF--VNYTGASILHLGSN 115
Query: 63 AFDNID--ACYDLT----LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
+I+ A + L L + N ++E L F +EN+E + +D +N +SV+
Sbjct: 116 VIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVD--YNYISVI 168
Score = 43 (20.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 22/106 (20%), Positives = 44/106 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L + +N +SV+ KL L IL + L + N+ R + +T DL+
Sbjct: 158 LQVDYNYISVIEPNAF----GKLHLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLK 213
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
+ + K+ Q+EE P ++ +++ +S++ L
Sbjct: 214 LLPYVGLLQHMD-KVVELQLEENPWNCSCELISLKDWLDSISYSAL 258
>MGI|MGI:106038 [details] [associations]
symbol:Lrrn1 "leucine rich repeat protein 1, neuronal"
species:10090 "Mus musculus" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
MGI:MGI:106038 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:D45913 EMBL:AK173186 EMBL:AK139355
EMBL:AK139965 EMBL:AK160841 EMBL:BC031122 EMBL:BC058701
IPI:IPI00126070 RefSeq:NP_032542.1 UniGene:Mm.428543
UniGene:Mm.488119 ProteinModelPortal:Q61809 SMR:Q61809
STRING:Q61809 PaxDb:Q61809 PRIDE:Q61809 Ensembl:ENSMUST00000049285
GeneID:16979 KEGG:mmu:16979 UCSC:uc009ddd.1 InParanoid:Q61809
ChiTaRS:LRRN1 NextBio:291056 Bgee:Q61809 CleanEx:MM_LRRN1
Genevestigator:Q61809 GermOnline:ENSMUSG00000034648 Uniprot:Q61809
Length = 716
Score = 238 (88.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 89/332 (26%), Positives = 156/332 (46%)
Query: 197 CN--KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
CN ++T + GNL + Q L L N + V ++ + L E+ FS N
Sbjct: 58 CNDLRLTRIPGNLSS---DTQVLLLQSNNIA-----KTVDELQQLFNLTELDFSQNNFTN 109
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
L NL L L ++ N I + +Y L +L++L + + +N+IS I N F +
Sbjct: 110 IKEVGL-ANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISTISANAFS-GL- 166
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K L + L++N L++I+S F + L + + N + I +F+ L+N+ ++VL+
Sbjct: 167 KNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMY 226
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
+ + NA V L +L L DNKL + + + L+L+ N I + E D
Sbjct: 227 LTDVPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLKF---LDLNKNPIHKIQEGDF 283
Query: 435 KQAPIYIKSLDLSN-NRIQEVPVNFLQTFADSLRKLYLDFN-EIKHLDATAFGNLDVLEL 492
K + +K L ++N + V L + L KL N ++ ++ AF ++ LE
Sbjct: 284 KNM-LRLKELGINNMGELVSVDRYALDNLPE-LTKLEATNNPKLSYIHRLAFRSVPALES 341
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
L L +N + V ++T +PNL+ I + N +
Sbjct: 342 LMLNNNALNAVYQKTVESLPNLREISIHSNPL 373
Score = 174 (66.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 69/250 (27%), Positives = 113/250 (45%)
Query: 287 NLTS-LNYINLEYNKISKIHNNLFH-FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTI 344
NL+S + L+ N I+K + L FN L E+ S N I+ NL +L T+
Sbjct: 69 NLSSDTQVLLLQSNNIAKTVDELQQLFN----LTELDFSQNNFTNIKEVGLANLTQLTTL 124
Query: 345 TLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNL 404
L N + + ++L+N+ + ++ NQI I NAF L NL++L L NKLK +
Sbjct: 125 HLEENQISEMTDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDS 184
Query: 405 NVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFA 463
F + + + M + N + + D P+ ++SL L+ + +VP N L
Sbjct: 185 RWFDSTPNLEILM---IGENPVIGIL--DMNFRPLSNLRSLVLAGMYLTDVPGNALVGL- 238
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE 523
DSL L N++ + A + L+ L L N I + + F M L++ +L N
Sbjct: 239 DSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNM--LRLKELGINN 296
Query: 524 ISMLTGEQFY 533
+ L Y
Sbjct: 297 MGELVSVDRY 306
Score = 160 (61.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 65/251 (25%), Positives = 111/251 (44%)
Query: 323 SNNYLELI-ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
SNN + + E +NL EL+ S N +IK NL + + L NQI +
Sbjct: 81 SNNIAKTVDELQQLFNLTELD---FSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDY 137
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
+L NL +L + N++ + N FS + + + L+L++N + + P +
Sbjct: 138 CLQDLSNLQELYINHNQISTISANAFSGLKNL---LRLHLNSNKLKVIDSRWFDSTP-NL 193
Query: 442 KSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
+ L + N + + +NF +LR L L + + A LD LE LS N +
Sbjct: 194 EILMIGENPVIGILDMNFRPL--SNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKL 251
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH-NRLRSLPRDVFSNT 559
V + +PNL+ +DL+ N I + F +L+ L I++ L S+ R N
Sbjct: 252 IKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNL 311
Query: 560 I-IEKLDISYN 569
+ KL+ + N
Sbjct: 312 PELTKLEATNN 322
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/207 (26%), Positives = 105/207 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNK-LQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
NK+ ++ F NL+ L + N + I+++N F L+ L ++ ++ + + P
Sbjct: 177 NKLKVIDSRWFDSTPNLEILMIGENPVIGILDMN---FRPLSNLRSLVLA-GMYLT-DVP 231
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L L++LE L+ +N + + +L + +L +++L N I KI F N+ R
Sbjct: 232 GNAL-VGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFK-NM-LR 288
Query: 317 LKEIRLSNNYLELIESDTFY--NLKELNTITLSYN-LLKSIKTTSFKNLNNMLNIVLSFN 373
LKE+ + NN EL+ D + NL EL + + N L I +F+++ + +++L+ N
Sbjct: 289 LKELGI-NNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNN 347
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLK 400
+ +Y +LPNL ++ + N L+
Sbjct: 348 ALNAVYQKTVESLPNLREISIHSNPLR 374
Score = 132 (51.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 46/173 (26%), Positives = 80/173 (46%)
Query: 405 NVFSNITSKQTPMNL---NLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQT 461
N+ + Q NL + S N TN+ E + +L L N+I E+ LQ
Sbjct: 83 NIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLT-QLTTLHLEENQISEMTDYCLQD 141
Query: 462 FADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
++ L++LY++ N+I + A AF L L L L N + V+ R F PNL+I+ +
Sbjct: 142 LSN-LQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGE 200
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLD-ISYNQDKI 573
N + + F LR L ++ L +P + ++ L+ +S+ +K+
Sbjct: 201 NPVIGILDMNFRPLSNLRSLVLAGMYLTDVPGNALVG--LDSLESLSFYDNKL 251
>UNIPROTKB|F1ND28 [details] [associations]
symbol:TLR21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043408 "regulation of MAPK cascade"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0004888 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:AADN02065737 IPI:IPI00590323
Ensembl:ENSGALT00000001120 OMA:NSADESW ArrayExpress:F1ND28
Uniprot:F1ND28
Length = 972
Score = 205 (77.2 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 84/363 (23%), Positives = 164/363 (45%)
Query: 214 LQELSLSFNKLQIIELNSNVFDVF--EKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
L+EL LS+N+LQ + + EKL++L + +L + P + + L L ++
Sbjct: 343 LRELDLSWNRLQHVGCAGRLLGKKQREKLEVLTVEHNLLK--KLPSCLGAQVLPRLYNIS 400
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
N I + + +L + L N + + + +H L E+RL NN L +
Sbjct: 401 FRFNRILTVGPQAFAYAPALQVLWLNINSLVWLDRQAL-WRLHN-LTELRLDNNLLTDLY 458
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
++F +L L T+ L N + + + F+ L + + L N ++++ + LP L +
Sbjct: 459 HNSFIDLHRLRTLNLRNNRVSVLFSGVFQGLAELQTLDLGGNNLRHLTAQSLQGLPKLRR 518
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN-NYITNLYEND---KKQAPIYIKSLDLS 447
L L N+L + + VF+ + + ++L +N YI+ + + +Y L
Sbjct: 519 LYLDRNRLLEVSSTVFAPVQATLGVLDLRANNLQYISQWLRKPPPFRNLSSLYDLKLQAQ 578
Query: 448 NNR-IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL--EHNNIAVVV 504
++ +P F Q L++L L N ++ + F +L L L+L N + +
Sbjct: 579 QPYGLKMLPHYFFQGLV-RLQQLSLSQNMLRSIPPDVFEDLGQLRSLALADSSNGLHDLP 637
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEK 563
F + NL+ +DL + LT E F +L++L+++ N L++ V S + +
Sbjct: 638 DGIFRNLGNLRFLDLENAGLHSLTLEVFGNLSRLQVLHLARNELKTFNDSVASRLSSLRY 697
Query: 564 LDI 566
LD+
Sbjct: 698 LDL 700
Score = 164 (62.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 90/367 (24%), Positives = 162/367 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ L + F HL L L L++N L+ L+ F+ L +L++S + +
Sbjct: 83 NKMRCLQPSAFAHLTQLHTLDLTYNLLET--LSPGAFNGLGVLVVLDLSHNKLTT--LAE 138
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ N +L L L + +N + + +L L +L ++L +++ + +L
Sbjct: 139 GVFN-SLGNLSSLQVQHNPLSTVSPSALLPLVNLRRLSLRGGRLNGLGAVAAAVQGLAQL 197
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L N L + L T+ L N L+ + S L ++ + LS+N I
Sbjct: 198 ELLDLCENNLTTLGPGPPLPASLL-TLQLCNNSLRELAGGSPDMLWHVKILDLSYNSISQ 256
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK-- 435
++L N+ L L N L F+L S+I P +L+ S + DK
Sbjct: 257 AEVFTQLHLRNISLLHLIGNPLDVFHLLDISDIQ----PRSLDFSG-LVLGAQGLDKVCL 311
Query: 436 --QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA--FGNL--DV 489
Q P ++ L L N ++ + N LQ LR+L L +N ++H+ G +
Sbjct: 312 RLQGPQALRRLQLQRNGLKVLHCNALQ-LCPVLRELDLSWNRLQHVGCAGRLLGKKQREK 370
Query: 490 LELLSLEHNNIAVVVKRTFIG---MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
LE+L++EHN + + + +G +P L I FN I + + F ++ L++L ++ N
Sbjct: 371 LEVLTVEHNLLKKLP--SCLGAQVLPRLYNISFRFNRILTVGPQAFAYAPALQVLWLNIN 428
Query: 547 RLRSLPR 553
L L R
Sbjct: 429 SLVWLDR 435
Score = 160 (61.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 71/259 (27%), Positives = 120/259 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +TDL N F L+ L+ L+L N++ + L S VF +LQ L++ + N
Sbjct: 452 NLLTDLYHNSFIDLHRLRTLNLRNNRVSV--LFSGVFQGLAELQTLDLGGN--NLRHLTA 507
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNL-TSLNYINLEYNKISKIHNNLFH---FNI 313
L + L L L +D N + + + + +L ++L N + I L F
Sbjct: 508 QSL-QGLPKLRRLYLDRNRLLEVSSTVFAPVQATLGVLDLRANNLQYISQWLRKPPPFRN 566
Query: 314 HKRLKEIRLSNN--Y-LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
L +++L Y L+++ F L L ++LS N+L+SI F++L + ++ L
Sbjct: 567 LSSLYDLKLQAQQPYGLKMLPHYFFQGLVRLQQLSLSQNMLRSIPPDVFEDLGQLRSLAL 626
Query: 371 --SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITN 428
S N + + F NL NL LDL++ L L VF N++ Q L+L+ N +
Sbjct: 627 ADSSNGLHDLPDGIFRNLGNLRFLDLENAGLHSLTLEVFGNLSRLQV---LHLARNELKT 683
Query: 429 LYENDKKQAPIY-IKSLDL 446
ND + + ++ LDL
Sbjct: 684 F--NDSVASRLSSLRYLDL 700
Score = 159 (61.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 69/260 (26%), Positives = 119/260 (45%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-----NVFDVF-EKLQLLEISFSL 249
R N+++ L +F+ L LQ L L N L+ + S + ++ ++ +LLE+S ++
Sbjct: 474 RNNRVSVLFSGVFQGLAELQTLDLGGNNLRHLTAQSLQGLPKLRRLYLDRNRLLEVSSTV 533
Query: 250 FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYS-LYNLTSLNYINLEYNKISKIHNNL 308
F + +L+ N L++++ RN S LY+L L Y H
Sbjct: 534 FAPVQATLGVLDLRANNLQYISQWLRKPPPFRNLSSLYDL-KLQ-AQQPYGLKMLPH--- 588
Query: 309 FHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL--SYNLLKSIKTTSFKNLNNML 366
+ F RL+++ LS N L I D F +L +L ++ L S N L + F+NL N+
Sbjct: 589 YFFQGLVRLQQLSLSQNMLRSIPPDVFEDLGQLRSLALADSSNGLHDLPDGIFRNLGNLR 648
Query: 367 NIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS------KQTPMNLN 420
+ L + + F NL L L L N+LK FN +V S ++S ++ P++
Sbjct: 649 FLDLENAGLHSLTLEVFGNLSRLQVLHLARNELKTFNDSVASRLSSLRYLDLRKCPLSCT 708
Query: 421 LSNNYITNLYENDKKQAPIY 440
N ++ N + Q +Y
Sbjct: 709 CDNMWLQGWLNNSRVQV-VY 727
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 68/287 (23%), Positives = 125/287 (43%)
Query: 294 INLEYNKISKIHNNLF-HFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
+NL YNK+ + + F H +L + L+ N LE + F L L + LS+N L
Sbjct: 78 LNLSYNKMRCLQPSAFAHLT---QLHTLDLTYNLLETLSPGAFNGLGVLVVLDLSHNKLT 134
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ F +L N+ ++ + N + + P+A + L NL +L L+ +L V + +
Sbjct: 135 TLAEGVFNSLGNLSSLQVQHNPLSTVSPSALLPLVNLRRLSLRGGRLNGLGA-VAAAVQG 193
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
L+L N +T L P + +L L NN ++E+ ++ L L
Sbjct: 194 LAQLELLDLCENNLTTL--GPGPPLPASLLTLQLCNNSLREL-AGGSPDMLWHVKILDLS 250
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
+N I + +L + LL L N + V + + ++Q L F+ ++ G Q
Sbjct: 251 YNSISQAEVFTQLHLRNISLLHLIGNPLDVF---HLLDISDIQPRSLDFS--GLVLGAQG 305
Query: 533 YFSFKLRI--------LNISHNRLRSLPRDVFSNT-IIEKLDISYNQ 570
LR+ L + N L+ L + ++ +LD+S+N+
Sbjct: 306 LDKVCLRLQGPQALRRLQLQRNGLKVLHCNALQLCPVLRELDLSWNR 352
Score = 127 (49.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 58/223 (26%), Positives = 96/223 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L+ L+NL EL L N L +L N F +L+ L + N +
Sbjct: 428 NSLVWLDRQALWRLHNLTELRLDNNLLT--DLYHNSFIDLHRLRTLNLRN---NRVSVLF 482
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L+ L + NN++++ SL L L + L+ N++ ++ + +F + L
Sbjct: 483 SGVFQGLAELQTLDLGGNNLRHLTAQSLQGLPKLRRLYLDRNRLLEVSSTVFA-PVQATL 541
Query: 318 KEIRLSNNYLELIES-----DTFYNLKELNTITLSYNL---LKSIKTTSFKNLNNMLNIV 369
+ L N L+ I F NL L + L LK + F+ L + +
Sbjct: 542 GVLDLRANNLQYISQWLRKPPPFRNLSSLYDLKLQAQQPYGLKMLPHYFFQGLVRLQQLS 601
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQD--NKLKDFNLNVFSNI 410
LS N ++ I P+ F +L L L L D N L D +F N+
Sbjct: 602 LSQNMLRSIPPDVFEDLGQLRSLALADSSNGLHDLPDGIFRNL 644
Score = 116 (45.9 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 465 SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
+L +L LD N + L +F +L L L+L +N ++V+ F G+ LQ +DL N +
Sbjct: 443 NLTELRLDNNLLTDLYHNSFIDLHRLRTLNLRNNRVSVLFSGVFQGLAELQTLDLGGNNL 502
Query: 525 SMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS--NTIIEKLDISYN 569
LT + KLR L + NRL + VF+ + LD+ N
Sbjct: 503 RHLTAQSLQGLPKLRRLYLDRNRLLEVSSTVFAPVQATLGVLDLRAN 549
Score = 85 (35.0 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L ++ ++ + PSAF ++ + TL +T +E L G F+ + + + LDLSHNKL
Sbjct: 78 LNLSYNKMRCLQPSAFAHLTQLH--TLDLTYNLLETLSPGAFNGLGVL--VVLDLSHNKL 133
Query: 109 SVLNMATLYS--NVTKLQ 124
+ L S N++ LQ
Sbjct: 134 TTLAEGVFNSLGNLSSLQ 151
Score = 78 (32.5 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 18/73 (24%), Positives = 41/73 (56%)
Query: 44 SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL 103
++L L++T L+ + P AF+ + + L +++ ++ L G+F+ + N+ +L +
Sbjct: 97 TQLHTLDLTYNLLETLSPGAFNGLGVL--VVLDLSHNKLTTLAEGVFNSLGNLS--SLQV 152
Query: 104 SHNKLSVLNMATL 116
HN LS ++ + L
Sbjct: 153 QHNPLSTVSPSAL 165
Score = 78 (32.5 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 37/134 (27%), Positives = 64/134 (47%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFN--------SKLRELEITG 53
+L + HN LS ++ + L V L+ L L+G +L G+ ++L L++
Sbjct: 149 SLQVQHNPLSTVSPSALLPLVN-LRRLS---LRGGRLNGLGAVAAAVQGLAQLELLDLCE 204
Query: 54 KDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNM 113
+L + P + A LTL++ N + EL G D + +++ LDLS+N +S +
Sbjct: 205 NNLTTLGPGP--PLPASL-LTLQLCNNSLRELAGGSPDMLWHVK--ILDLSYNSISQAEV 259
Query: 114 AT-LYSNVTKLQHL 126
T L+ L HL
Sbjct: 260 FTQLHLRNISLLHL 273
Score = 66 (28.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL-QGIFNS--KLRELEITGKDLKF 58
TLDL++N L L+ ++ + L L + K L +G+FNS L L++ L
Sbjct: 101 TLDLTYNLLETLSPGA-FNGLGVLVVLDLSHNKLTTLAEGVFNSLGNLSSLQVQHNPLST 159
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTL-DLSHNKLSVL 111
+ PSA + L+L+ ++ L + ++ + Q+ L DL N L+ L
Sbjct: 160 VSPSALLPLVNLRRLSLR--GGRLNGL-GAVAAAVQGLAQLELLDLCENNLTTL 210
Score = 56 (24.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 1 MTLDLSHNKLSVLNMATLYS--NVTKLQ--HLGTTILKGDQLQGIFNSKLRELEITG 53
+ LDLSHNKL+ L S N++ LQ H + + L + N LR L + G
Sbjct: 124 VVLDLSHNKLTTLAEGVFNSLGNLSSLQVQHNPLSTVSPSALLPLVN--LRRLSLRG 178
Score = 40 (19.1 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 19/75 (25%), Positives = 28/75 (37%)
Query: 37 QLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENI 96
+LQG LR L++ LK + +A +L L Q L K +
Sbjct: 312 RLQG--PQALRRLQLQRNGLKVLHCNALQLCPVLRELDLSWNRLQHVGCAGRLLGKKQRE 369
Query: 97 EQMTLDLSHNKLSVL 111
+ L + HN L L
Sbjct: 370 KLEVLTVEHNLLKKL 384
>RGD|1308858 [details] [associations]
symbol:Slitrk1 "SLIT and NTRK-like family, member 1"
species:10116 "Rattus norvegicus" [GO:0007399 "nervous system
development" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=ISO]
[GO:0035264 "multicellular organism growth" evidence=ISO]
[GO:0042592 "homeostatic process" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:1308858 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 EMBL:CH473951 CTD:114798
OMA:NGLPCPG OrthoDB:EOG428211 GeneTree:ENSGT00680000099775
IPI:IPI00373549 RefSeq:NP_001100753.1 UniGene:Rn.31034
Ensembl:ENSRNOT00000012195 GeneID:306147 KEGG:rno:306147
UCSC:RGD:1308858 NextBio:655550 Uniprot:D3Z8D8
Length = 696
Score = 170 (64.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 46/157 (29%), Positives = 81/157 (51%)
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N N+ ++ + L+++ + L NKI I + HF +K L + L NN + IE+
Sbjct: 360 NNRNVSSLADLKP-KLSNVQELFLRDNKIHSIRRS--HFVDYKNLILLDLGNNNIANIEN 416
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
+TF NL +L + + N L ++ F L N+ + + +N I+ I P F +P L L
Sbjct: 417 NTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNAMPKLRIL 476
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L +N L+ ++VF+ ++ + L+L NNY L
Sbjct: 477 ILNNNLLRSLPVDVFAGVSLSK----LSLHNNYFMYL 509
Score = 165 (63.1 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 45/155 (29%), Positives = 80/155 (51%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--N 474
+ +N +N +++L D K ++ L L +N+I + + F D + LD N
Sbjct: 355 LKMNCNNRNVSSLA--DLKPKLSNVQELFLRDNKIHSIRRSH---FVDYKNLILLDLGNN 409
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
I +++ F NL L L ++ N + + + F G+ NL+ +++ +N I ++ F
Sbjct: 410 NIANIENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNA 469
Query: 535 SFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
KLRIL +++N LRSLP DVF+ + KL + N
Sbjct: 470 MPKLRILILNNNLLRSLPVDVFAGVSLSKLSLHNN 504
Score = 144 (55.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 197 CNK--ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNE 254
CN ++ L +L L N+QEL L NK+ I S+ D ++ L LL++ + + E
Sbjct: 359 CNNRNVSSL-ADLKPKLSNVQELFLRDNKIHSIR-RSHFVD-YKNLILLDLGNNNIANIE 415
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
+ KNL L WL MD+N + + L +L Y+N+EYN I I F N
Sbjct: 416 NNTF---KNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTF--NAM 470
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVLSFN 373
+L+ + L+NN L + D F + L+ ++L N + L +++ I L N
Sbjct: 471 PKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQLTSIIQIDLHGN 529
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + + N F +++ L+++ N + + AF L +++ L + +N I
Sbjct: 63 LFLHGNSLTRLFPNEFANFYNAV-SLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSF 121
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
K+TF+G+ +L+ + FN + + F KL +L ++ N + +LP +VF I
Sbjct: 122 RKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVPITH 181
Query: 564 LDISYNQDKIRPGRE 578
LD+ N+ K P E
Sbjct: 182 LDLRGNRLKTLPYEE 196
Score = 123 (48.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 40/148 (27%), Positives = 72/148 (48%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N ++++ N F N + + + + NN L I F L+ + + ++ N +K
Sbjct: 62 HLFLHGNSLTRLFPNEFA-NFYNAVS-LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIK 119
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
S + +F L+++ + FN ++ I P AF +L L L L DN + NVF +
Sbjct: 120 SFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYV-- 177
Query: 413 KQTPM-NLNLSNNYITNL-YENDKKQAP 438
P+ +L+L N + L YE +Q P
Sbjct: 178 ---PITHLDLRGNRLKTLPYEEVLEQIP 202
Score = 96 (38.9 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L M+NN + I + L + +++ NKI F + L+ ++ N L
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTF-LGLDD-LEYLQADFNLLRD 144
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFVNLPN 388
I+ F +L +L + L+ NL+ ++ F+ + + ++ L N++K + Y +P
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 389 LVKLDLQDN 397
+ ++ L+DN
Sbjct: 204 IAEILLEDN 212
Score = 81 (33.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 22/91 (24%), Positives = 48/91 (52%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L ++ L ++NN IK+ R + L L Y+ ++N + I F +++K L+ + L+
Sbjct: 105 LQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQ-DLNK-LEVLILN 162
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+N + + ++ F + + + L N LK++
Sbjct: 163 DNLISTLPANVFQYVP-ITHLDLRGNRLKTL 192
Score = 66 (28.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 1 MTLDLSHNKL-SVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKD---L 56
++L + +N L ++ A L + K H+ +K + Q L +LE D L
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLG--LDDLEYLQADFNLL 142
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
+ IDP AF +++ L L + I LP+ +F + LDL N+L L
Sbjct: 143 RDIDPGAFQDLNKLEVLILN--DNLISTLPANVFQYVPITH---LDLRGNRLKTL 192
Score = 58 (25.5 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T L N F + ++ +NN +E V NKI F
Sbjct: 68 NSLTRLFPNEFANFYNAVSLHMENNGLHEI-VPGAFLGLQLVKRLHINNNKIKSFRKQTF 126
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS---NEFPY 257
L +L+ L FN L+ +++ F KL++L ++ +L ++ N F Y
Sbjct: 127 LGLDDLEYLQADFNLLR--DIDPGAFQDLNKLEVLILNDNLISTLPANVFQY 176
>UNIPROTKB|O60602 [details] [associations]
symbol:TLR5 "Toll-like receptor 5" species:9606 "Homo
sapiens" [GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0034146 "toll-like receptor 5 signaling pathway"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0050707 "regulation of cytokine secretion"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0071260
"cellular response to mechanical stimulus" evidence=IEP]
[GO:0005149 "interleukin-1 receptor binding" evidence=IPI]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0034123
"positive regulation of toll-like receptor signaling pathway"
evidence=IDA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IDA] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027176 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005886
Reactome:REACT_6900 EMBL:CH471100 GO:GO:0006954 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0032757 GO:GO:0071260 MIM:109100 GO:GO:0002755
PDB:1P95 PDBsum:1P95 SUPFAM:SSF52200 GO:GO:0034123 EMBL:AF051151
EMBL:AB060695 EMBL:AB445645 EMBL:FJ556980 EMBL:FJ556987
EMBL:AL929091 EMBL:BC109118 EMBL:U88881 IPI:IPI00298758
RefSeq:NP_003259.2 UniGene:Hs.604542 PDB:3J0A PDBsum:3J0A
ProteinModelPortal:O60602 SMR:O60602 IntAct:O60602
MINT:MINT-4950390 STRING:O60602 PhosphoSite:O60602 PRIDE:O60602
DNASU:7100 Ensembl:ENST00000342210 Ensembl:ENST00000366881
Ensembl:ENST00000540964 GeneID:7100 KEGG:hsa:7100 UCSC:uc001hnv.2
CTD:7100 GeneCards:GC01M223283 HGNC:HGNC:11851 HPA:CAB009013
HPA:HPA015573 MIM:601744 MIM:603031 MIM:608556 neXtProt:NX_O60602
PharmGKB:PA36553 eggNOG:NOG271351 HOGENOM:HOG000008675
HOVERGEN:HBG023182 InParanoid:O60602 KO:K10168 OMA:VSGNGWT
OrthoDB:EOG4BZN24 PhylomeDB:O60602 GenomeRNAi:7100 NextBio:27777
ArrayExpress:O60602 Bgee:O60602 CleanEx:HS_TLR5
Genevestigator:O60602 GermOnline:ENSG00000187554
PANTHER:PTHR24365:SF7 Uniprot:O60602
Length = 858
Score = 215 (80.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 85/316 (26%), Positives = 148/316 (46%)
Query: 275 NNIKNIRNYSLYNL--TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+NIK+ + L +S+ +++L + + +++ +F K LK + L+ N + I
Sbjct: 272 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFE--TLKDLKVLNLAYNKINKIAD 329
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
+ FY L L + LSYNLL + +++F L + I L N I I F L L L
Sbjct: 330 EAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTL 389
Query: 393 DLQDNKLKDFNL-----NVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI-------- 439
DL+DN L + ++F + T +NL+ N I +L EN + I
Sbjct: 390 DLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLI-HLSENRLENLDILYFLLRVP 448
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK-----HLDATAFGNLDVLELLS 494
+++ L L+ NR + + SL +L+L N ++ L F L L++L
Sbjct: 449 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLY 508
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
L HN + + F + L+ + L+ N +++L+ L IL+IS N+L + D
Sbjct: 509 LNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL--PANLEILDISRNQLLAPNPD 566
Query: 555 VFSNTIIEKLDISYNQ 570
VF + + LDI++N+
Sbjct: 567 VFVSLSV--LDITHNK 580
Score = 201 (75.8 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 76/306 (24%), Positives = 140/306 (45%)
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
+N I + +SL + ++ I N F ++ + LS+ ++ + S
Sbjct: 247 SNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR 306
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
F LK+L + L+YN + I +F L+N+ + LS+N + +Y + F LP + +D
Sbjct: 307 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYID 366
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE 453
LQ N + F + QT L+L +N +T ++ P I + LS N++
Sbjct: 367 LQKNHIAIIQDQTFKFLEKLQT---LDLRDNALTTIHF-----IPS-IPDIFLSGNKLVT 417
Query: 454 VP-VNFLQTFADSLRKLYLDFNEIKHLDATAFG-NLDVLELLSLEHNNIAVVV-KRTFIG 510
+P +N ++L N +++LD F + L++L L N + +T
Sbjct: 418 LPKINLTANL------IHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE 471
Query: 511 MPNLQIIDLSFNEISM-----LTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKL 564
P+L+ + L N + + L + F L++L ++HN L SLP VFS+ T + L
Sbjct: 472 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGL 531
Query: 565 DISYNQ 570
++ N+
Sbjct: 532 SLNSNR 537
Score = 193 (73.0 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 79/292 (27%), Positives = 143/292 (48%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+ L L+ L + N I I + + Y L +L +NL YN + +++++ F + + K + I
Sbjct: 309 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNF-YGLPK-VAYID 366
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N++ +I+ TF L++L T+ L N L +I F + ++ +I LS N++ + P
Sbjct: 367 LQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH---F--IPSIPDIFLSGNKLVTL-PK 420
Query: 382 AFVNLP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
+NL NL+ L +N+L++ ++ F + LN N + + + + P
Sbjct: 421 --INLTANLIHLS--ENRLENLDILYFLLRVPHLQILILN-QNRFSSCSGDQTPSENPS- 474
Query: 441 IKSLDLSNNRIQEVPVNFL--QTFA--DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
++ L L N +Q L F L+ LYL+ N + L F +L L LSL
Sbjct: 475 LEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLN 534
Query: 497 HNNIAVVVKRTFIGMP-NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR 547
N + V+ +P NL+I+D+S N++ + F L +L+I+HN+
Sbjct: 535 SNRLTVLSHND---LPANLEILDISRNQLLAPNPDVFV---SLSVLDITHNK 580
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 97/363 (26%), Positives = 159/363 (43%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L + L LSFN ++ + +S F E+LQLLE+ S + +NL L L
Sbjct: 45 LNTTERLLLSFNYIRTVTASS--FPFLEQLQLLELG-SQYTPLTIDKEAF-RNLPNLRIL 100
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE-L 329
+ ++ I + + L L + L + +S +F K L + LS N + L
Sbjct: 101 DLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSL 160
Query: 330 IESDTFYNLKELNTITLSYNLLKSI----------KTTSFKNLN-NMLNIVLSFNQIKYI 378
+F L L +I S N + + KT SF +L N L +S + K +
Sbjct: 161 YLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCM 220
Query: 379 YPNAFVNLPNLVKLDLQDNKLK-DFNLNVFSNITSKQTPMNLNLSNNYI-TNL-YENDKK 435
P F N+ L LD+ N D N FSN SK +L L+++ + + N K
Sbjct: 221 NP--FRNMV-LEILDVSGNGWTVDITGN-FSNAISKSQAFSLILAHHIMGAGFGFHNIKD 276
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFL-----QTFAD--SLRKLYLDFNEIKHLDATAFGNLD 488
L S+ R ++ F+ + F L+ L L +N+I + AF LD
Sbjct: 277 PDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLD 336
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L++L+L +N + + F G+P + IDL N I+++ + F F KL+ L++ N L
Sbjct: 337 NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 396
Query: 549 RSL 551
++
Sbjct: 397 TTI 399
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 85/328 (25%), Positives = 146/328 (44%)
Query: 233 VFDVFEKLQLLEISF-SLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSL 291
V + E+L LL ++ ++ FP+ + L LE L + I + NL +L
Sbjct: 44 VLNTTERL-LLSFNYIRTVTASSFPFL---EQLQLLE-LGSQYTPL-TIDKEAFRNLPNL 97
Query: 292 NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE--LIESDTFYNLKELNTITLSYN 349
++L +KI +H + F H L E+RL L +++ F NLK L + LS N
Sbjct: 98 RILDLGSSKIYFLHPDAFQGLFH--LFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKN 155
Query: 350 LLKSIKT-TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNL---N 405
++S+ SF LN++ +I S NQI + + P LQ L F+L +
Sbjct: 156 QIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE--P------LQGKTLSFFSLAANS 207
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADS 465
++S + S +N N + + + + I + SN I + F A
Sbjct: 208 LYSRV-SVDWGKCMNPFRNMVLEILDVSGNGWTVDITG-NFSN-AISKSQA-FSLILAHH 263
Query: 466 LRKLYLDFNEIKHLDATAFGNL--DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE 523
+ F+ IK D F L + L L H + + R F + +L++++L++N+
Sbjct: 264 IMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNK 323
Query: 524 ISMLTGEQFYFSFKLRILNISHNRLRSL 551
I+ + E FY L++LN+S+N L L
Sbjct: 324 INKIADEAFYGLDNLQVLNLSYNLLGEL 351
Score = 158 (60.7 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 88/374 (23%), Positives = 175/374 (46%)
Query: 208 FRHLYNLQELSLSFNKLQIIELNS--NVFDVFE-KLQLLEISFSLFNSNEFPYYILNKNL 264
FR+L NL+ L L +K+ + ++ +F +FE +L +S ++ F +NL
Sbjct: 91 FRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYF------RNL 144
Query: 265 NTLEWLAMDNNNIKNIRNY-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L + N I+++ + S L SL I+ N+I + + K L L+
Sbjct: 145 KALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 204
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNA 382
N L S + K +N N++ I S ++I +F N I +
Sbjct: 205 ANSLYSRVSVDWG--KCMNPFR---NMVLEILDVSGNGWT--VDITGNFSNAISKSQAFS 257
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-I 441
+ +++ + +KD + N F+ + ++ + +L+LS+ ++ +L N + + +
Sbjct: 258 LILAHHIMGAGFGFHNIKDPDQNTFAGL-ARSSVRHLDLSHGFVFSL--NSRVFETLKDL 314
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
K L+L+ N+I ++ D+L+ L L +N + L ++ F L + + L+ N+IA
Sbjct: 315 KVLNLAYNKINKIADEAFYGL-DNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIA 373
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR-DVFSNTI 560
++ +TF + LQ +DL N ++ + +F + + +S N+L +LP+ ++ +N I
Sbjct: 374 IIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVTLPKINLTANLI 428
Query: 561 ------IEKLDISY 568
+E LDI Y
Sbjct: 429 HLSENRLENLDILY 442
Score = 137 (53.3 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 74/332 (22%), Positives = 144/332 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS-NEFP 256
+ I D + N F L L + + LNS VF+ + L++L ++++ N +
Sbjct: 272 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEA 331
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+Y L+ L+ L + N + + + + Y L + YI+L+ N I+ I + F F ++
Sbjct: 332 FY----GLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFL--EK 385
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQI 375
L+ + L +N L T + + + I LS N K + +N N++ LS N++
Sbjct: 386 LQTLDLRDNALT-----TIHFIPSIPDIFLSGN-----KLVTLPKINLTANLIHLSENRL 435
Query: 376 KYIYPNAFV-NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN-- 432
+ + F+ +P+L L L N+ + + + + L L N + +E
Sbjct: 436 ENLDILYFLLRVPHLQILILNQNRFSSCSGD--QTPSENPSLEQLFLGENMLQLAWETEL 493
Query: 433 --DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV- 489
D + +++ L L++N + +P +LR L L+ N + L + +L
Sbjct: 494 CWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT-ALRGLSLNSNRLTVL---SHNDLPAN 549
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
LE+L + N + F+ + L I F
Sbjct: 550 LEILDISRNQLLAPNPDVFVSLSVLDITHNKF 581
Score = 124 (48.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 79/340 (23%), Positives = 145/340 (42%)
Query: 202 DLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILN 261
DL+ N R LY L N L+ I+ +SN +F + E ++ L
Sbjct: 151 DLSKNQIRSLY-LHPSFGKLNSLKSIDFSSN--QIF---LVCEHELEPLQGKTLSFFSLA 204
Query: 262 KNLNTLEWLAMDNNNIKN-IRNYSLYNL-TSLNYINLEY-----NKISKIHNNLFHFNIH 314
N + +++D N RN L L S N ++ N ISK + F +
Sbjct: 205 AN-SLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISK--SQAFSLILA 261
Query: 315 KRLKEIRLSNNYLELIESDTFYNL--KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ + ++ + +TF L + + LS+ + S+ + F+ L ++ + L++
Sbjct: 262 HHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAY 321
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N+I I AF L NL L+L N L + SN ++L N+I + +
Sbjct: 322 NKINKIADEAFYGLDNLQVLNLSYNLLGEL---YSSNFYGLPKVAYIDLQKNHIAIIQDQ 378
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
K +++LDL +N + ++F+ + D ++L N++ L NL L
Sbjct: 379 TFKFLE-KLQTLDLRDNAL--TTIHFIPSIPD----IFLSGNKLVTLPKI---NLTA-NL 427
Query: 493 LSLEHNNIAVV-VKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
+ L N + + + + +P+LQI+ L+ N S +G+Q
Sbjct: 428 IHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQ 467
Score = 72 (30.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 21/82 (25%), Positives = 38/82 (46%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLS 104
LR L++ + F+ P AF + ++L L L G F N++ +T LDLS
Sbjct: 97 LRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYF---RNLKALTRLDLS 153
Query: 105 HNKLSVLNMATLYSNVTKLQHL 126
N++ L + + + L+ +
Sbjct: 154 KNQIRSLYLHPSFGKLNSLKSI 175
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 175 (66.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 53/153 (34%), Positives = 76/153 (49%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L N + IY F L L L L DN++ N F ++ S + L L+NN + +
Sbjct: 107 LQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLE---RLRLNNNRLKAI 163
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
EN + ++ LD+SNN I V + A SLR L LD N+I LD AF L
Sbjct: 164 PENFVTSSASLLR-LDISNNVITTVGRRVFKG-AQSLRSLQLDNNQITCLDEHAFKGLVE 221
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
LE+L+L +NN+ + F G+ L+ + LS N
Sbjct: 222 LEILTLNNNNLTSLPHNIFGGLGRLRALRLSDN 254
Score = 168 (64.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 86/366 (23%), Positives = 147/366 (40%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T + F+ L L+ L L+ N++ IE NS F L+ L ++ + + P
Sbjct: 110 NNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNS--FQDLVSLERLRLNNNRLKA--IPE 165
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + + L L + NN I + SL + L+ N+I+ + + F + L
Sbjct: 166 NFVTSSASLLR-LDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVE--L 222
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L+NN L + + F L L + LS N S+ L+ L
Sbjct: 223 EILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSW--LSRFLRSATRLAPYTR 280
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNI---TSKQTPMNLNLSNNYITNLYENDK 434
+ + N+ DL D + K L + + P ++ I + E
Sbjct: 281 CQSPSQLKGQNVA--DLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADG-IVDCREKSL 337
Query: 435 KQAPIYIKS----LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
P+ + L L N I E+P +F LR++ L N I + A L L
Sbjct: 338 TSVPVTLPDDTTELRLEQNFITELPPKSFSSFR-RLRRIDLSNNNISRIAHDALSGLKQL 396
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
L L N I + F G+ +LQ++ L+ NEIS + + F L +L++ N ++S
Sbjct: 397 TTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQS 456
Query: 551 LPRDVF 556
L F
Sbjct: 457 LANGTF 462
Score = 154 (59.3 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 42/138 (30%), Positives = 71/138 (51%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L L N +T +YE D ++ ++ L L++N+I + N Q SL +L L+ N +K
Sbjct: 105 LELQGNNLTVIYETDFQRLT-KLRMLQLTDNQIHTIERNSFQDLV-SLERLRLNNNRLKA 162
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+ + L L + +N I V +R F G +L+ + L N+I+ L F +L
Sbjct: 163 IPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVEL 222
Query: 539 RILNISHNRLRSLPRDVF 556
IL +++N L SLP ++F
Sbjct: 223 EILTLNNNNLTSLPHNIF 240
Score = 151 (58.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 51/162 (31%), Positives = 79/162 (48%)
Query: 340 ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
++ + L N L I T F+ L + + L+ NQI I N+F +L +L +L L +N+L
Sbjct: 101 DVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRL 160
Query: 400 KDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFL 459
K N +TS + + L++SNN IT + K A ++SL L NN+I + +
Sbjct: 161 KAIPENF---VTSSASLLRLDISNNVITTVGRRVFKGAQS-LRSLQLDNNQITCLDEHAF 216
Query: 460 QTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+ + L L L+ N + L FG L L L L N A
Sbjct: 217 KGLVE-LEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFA 257
Score = 148 (57.2 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 39/122 (31%), Positives = 65/122 (53%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
+ LE N I+++ F+ +RL+ I LSNN + I D LK+L T+ L N +K
Sbjct: 351 LRLEQNFITELPPK--SFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKD 408
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ + FK L ++ ++L+ N+I I +AF +L +L L L DN ++ F + S
Sbjct: 409 LPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSI 468
Query: 414 QT 415
+T
Sbjct: 469 KT 470
Score = 146 (56.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 45/158 (28%), Positives = 79/158 (50%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
++ + L N L +I F L +L + L+ N + +I+ SF++L ++ + L+ N++K
Sbjct: 102 VERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLK 161
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
I N + +L++LD+ +N + VF S ++ L L NN IT L E+ K
Sbjct: 162 AIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRS---LQLDNNQITCLDEHAFKG 218
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+ ++ L L+NN + +P N LR L L N
Sbjct: 219 L-VELEILTLNNNNLTSLPHNIFGGLG-RLRALRLSDN 254
Score = 144 (55.7 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
Identities = 38/116 (32%), Positives = 64/116 (55%)
Query: 296 LEYNKISKIH-NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
LE N+I +IH + H + L + LSNN + ++ + TF NL +L+T+ +SYN L+ +
Sbjct: 773 LESNEIEQIHYERIRHL---RSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCL 829
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVFSN 409
+ + LNN+ + L N+I + +F +L +L + L N L D L FS+
Sbjct: 830 QRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKWFSD 885
Score = 142 (55.0 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 44/158 (27%), Positives = 73/158 (46%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
+E L + NN+ I LT L + L N+I I N F + L+ +RL+NN
Sbjct: 102 VERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVS--LERLRLNNNR 159
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
L+ I + + L + +S N++ ++ FK ++ ++ L NQI + +AF L
Sbjct: 160 LKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGL 219
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L L L +N L N+F + + L LS+N
Sbjct: 220 VELEILTLNNNNLTSLPHNIFGGLGRLRA---LRLSDN 254
Score = 126 (49.4 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 384 VNLPN-LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
V LP+ +L L+ N + + FS+ + ++LSNN I+ + +D +
Sbjct: 342 VTLPDDTTELRLEQNFITELPPKSFSSFRRLR---RIDLSNNNISRI-AHDALSGLKQLT 397
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+L L N+I+++P + SL+ L L+ NEI + AF +L L LLSL NNI
Sbjct: 398 TLVLYGNKIKDLPSGVFKGLG-SLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQS 456
Query: 503 VVKRTFIGMPNLQIIDLSFN 522
+ TF M +++ + L+ N
Sbjct: 457 LANGTFDAMKSIKTVHLAKN 476
Score = 118 (46.6 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
S N+++E+P + +LYL+ NEI+ + +L L L L +N I ++
Sbjct: 753 SRNQLKEIP----RGIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNY 808
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
TF + L + +S+N++ L LR+L++ NR+ LP F +
Sbjct: 809 TFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFED 860
Score = 117 (46.2 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 38/137 (27%), Positives = 60/137 (43%)
Query: 410 ITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
+T L L N+IT L ++ +DLSNN I + + L L L
Sbjct: 342 VTLPDDTTELRLEQNFITELPPKSFSSFR-RLRRIDLSNNNISRIAHDALSGLKQ-LTTL 399
Query: 470 YLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG 529
L N+IK L + F L L+LL L N I+ + K F + +L ++ L N I L
Sbjct: 400 VLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLAN 459
Query: 530 EQFYFSFKLRILNISHN 546
F ++ ++++ N
Sbjct: 460 GTFDAMKSIKTVHLAKN 476
Score = 113 (44.8 bits), Expect = 9.3e-13, Sum P(3) = 9.3e-13
Identities = 31/111 (27%), Positives = 61/111 (54%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
L+T E L +++N + I + L+ L L + L+ N+++ I N F H ++E++L
Sbjct: 570 LHTTE-LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH--IQELQL 626
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
N ++ I + F L +L T+ L N + + SF++LN++ ++ L+ N
Sbjct: 627 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 677
Score = 112 (44.5 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 244 EISFSLFNSNEFP--YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
E S SNE +Y ++L +L L + NN I + NY+ NLT L+ + + YNK+
Sbjct: 767 ETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKL 826
Query: 302 SKIHNN-LFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+ + L N L+ + L N + ++ +F +LK L I L N L
Sbjct: 827 QCLQRHALSGLN---NLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPL 874
Score = 106 (42.4 bits), Expect = 7.5e-08, Sum P(3) = 7.5e-08
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
E+ L +N +E I + +L+ L + LS N + + +F NL + +++S+N+++ +
Sbjct: 770 ELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCL 829
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
+A L NL L L N++ F ++ S
Sbjct: 830 QRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKS 863
Score = 105 (42.0 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 296 LEYNKISKIHNN-LFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
L N++ +I ++ LF H L ++ L N L IE + F + + L N +K I
Sbjct: 577 LNDNELGRISSDGLFGRLPH--LVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEI 634
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
F L+ + + L NQI + P +F +L +L L+L N FN N
Sbjct: 635 SNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNP---FNCN 682
Score = 105 (42.0 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 35/113 (30%), Positives = 56/113 (49%)
Query: 319 EIRLSNNYLELIESD-TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
E+ L++N L I SD F L L + L N L I+ +F+ +++ + L N+IK
Sbjct: 574 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 633
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
I F+ L L L+L DN++ F ++ S T +NL SN + N +
Sbjct: 634 ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSL-TSLNL-ASNPFNCNCH 684
Score = 99 (39.9 bits), Expect = 4.6e-14, Sum P(4) = 4.6e-14
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
+ P++ L L++N + + + L L KL L N++ ++ AF ++ L
Sbjct: 566 RDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 625
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
L N I + + F+G+ L+ ++L N+IS + F L LN++ N
Sbjct: 626 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 677
Score = 98 (39.6 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 344 ITLSYNLLKSIKTTS-FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF 402
+ L+ N L I + F L +++ + L NQ+ I PNAF ++ +L L +NK+K+
Sbjct: 575 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEI 634
Query: 403 NLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN---FL 459
+ +F + +T LNL +N I+ + + + SL+L++N P N L
Sbjct: 635 SNKMFLGLHQLKT---LNLYDNQISCVMPGSFEHLNS-LTSLNLASN-----PFNCNCHL 685
Query: 460 QTFADSLRKLYLD 472
FA+ LRK L+
Sbjct: 686 AWFAEWLRKKSLN 698
Score = 93 (37.8 bits), Expect = 6.0e-14, Sum P(3) = 6.0e-14
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 419 LNLSNNYITNL-YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD--SLRKLYLDFNE 475
L L +N I + YE + + LDLSNN+I + N+ TFA+ L L + +N+
Sbjct: 771 LYLESNEIEQIHYERIRHLRSL--TRLDLSNNQIT-ILSNY--TFANLTKLSTLIISYNK 825
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ L A L+ L +LSL N I+++ + +F + +L I L N +
Sbjct: 826 LQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPL 874
Score = 92 (37.4 bits), Expect = 7.6e-14, Sum P(3) = 7.6e-14
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 443 SLDLSNNRIQEVPVNF-LQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNI 500
++D + ++E+P + L T +L L+ NE+ + + FG L L L L+ N +
Sbjct: 553 TVDCTGRGLKEIPRDIPLHT-----TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQL 607
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-T 559
+ F G ++Q + L N+I ++ + F +L+ LN+ N++ + F +
Sbjct: 608 TGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLN 667
Query: 560 IIEKLDISYN 569
+ L+++ N
Sbjct: 668 SLTSLNLASN 677
Score = 92 (37.4 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L + + NNNI I + +L L L + L NKI + + +F + L+ + L+ N
Sbjct: 372 LRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFK-GLGS-LQLLLLNANE 429
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
+ I D F +L L+ ++L N ++S+ +F + ++ + L+ N
Sbjct: 430 ISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKN 476
Score = 77 (32.2 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 31/137 (22%), Positives = 64/137 (46%)
Query: 43 NSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLD 102
++ + LE+ G +L I + F + L++T+ QI + F + ++E+ L
Sbjct: 99 SADVERLELQGNNLTVIYETDFQRLTKLR--MLQLTDNQIHTIERNSFQDLVSLER--LR 154
Query: 103 LSHNKLSVL--NMATLYSNVTKLQ---HLGTTILKDREKXXXXXXXXXXRCNKITDLNGN 157
L++N+L + N T +++ +L ++ TT+ + K N+IT L+ +
Sbjct: 155 LNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEH 214
Query: 158 LFRHLQKSIVKAKKNNN 174
F+ L + + NNN
Sbjct: 215 AFKGLVELEILTLNNNN 231
Score = 77 (32.2 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I+ + + L L L L NK++ +L S VF LQLL L N+NE
Sbjct: 380 NNISRIAHDALSGLKQLTTLVLYGNKIK--DLPSGVFKGLGSLQLL-----LLNANEISC 432
Query: 258 YILN--KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
+ ++L++L L++ +NNI+++ N + + S+ ++L N
Sbjct: 433 IRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKN 476
Score = 77 (32.2 bits), Expect = 9.3e-13, Sum P(3) = 9.3e-13
Identities = 29/110 (26%), Positives = 59/110 (53%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ----GIFNS--KLRELEITGKDL 56
+DLS+N +S + + ++ L+ L T +L G++++ G+F L+ L + ++
Sbjct: 375 IDLSNNNISRI----AHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEI 430
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
I AF ++ + L+L N I+ L +G FD +++I+ T+ L+ N
Sbjct: 431 SCIRKDAFRDLHSLSLLSLYDNN--IQSLANGTFDAMKSIK--TVHLAKN 476
Score = 72 (30.4 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 23/113 (20%), Positives = 59/113 (52%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGT--TILKGDQLQGIFNSKLRELEITGKDLKF 58
+ +D SH L+ + + ++V +L+ G T++ Q + +KLR L++T +
Sbjct: 82 LNVDCSHRGLTSVPRK-ISADVERLELQGNNLTVIYETDFQRL--TKLRMLQLTDNQIHT 138
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
I+ ++F ++ + L++ N +++ +P ++ + LD+S+N ++ +
Sbjct: 139 IERNSFQDLVSLE--RLRLNNNRLKAIPENFVTSSASL--LRLDISNNVITTV 187
Score = 63 (27.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/89 (25%), Positives = 47/89 (52%)
Query: 40 GIFNS--KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G+F L +LE+ L I+P+AF+ A + L++ +I+E+ + +F + ++
Sbjct: 589 GLFGRLPHLVKLELKRNQLTGIEPNAFEG--ASHIQELQLGENKIKEISNKMFLGLHQLK 646
Query: 98 QMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
TL+L N++S + M + ++ L L
Sbjct: 647 --TLNLYDNQISCV-MPGSFEHLNSLTSL 672
Score = 62 (26.9 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 19/68 (27%), Positives = 40/68 (58%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDL 103
+LR ++++ ++ I A D + LT L + +I++LPSG+F + ++ Q+ L L
Sbjct: 371 RLRRIDLSNNNISRI---AHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSL-QLLL-L 425
Query: 104 SHNKLSVL 111
+ N++S +
Sbjct: 426 NANEISCI 433
Score = 62 (26.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 207 LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNT 266
LF L +L +L L N+L IE N F+ +Q L++ + ++ L+
Sbjct: 590 LFGRLPHLVKLELKRNQLTGIE--PNAFEGASHIQELQLGENKIKEISNKMFL---GLHQ 644
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
L+ L + +N I + S +L SL +NL N
Sbjct: 645 LKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 677
Score = 62 (26.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 31/111 (27%), Positives = 48/111 (43%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
EL L+ N+L I + +F L LE+ + E P + + ++ L + N
Sbjct: 574 ELLLNDNELGRIS-SDGLFGRLPHLVKLELKRNQLTGIE-PNAF--EGASHIQELQLGEN 629
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF-HFNIHKRLKEIRLSNN 325
IK I N L L +NL N+IS + F H N L + L++N
Sbjct: 630 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLN---SLTSLNLASN 677
Score = 60 (26.2 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
N++T + N F ++QEL L NK++ E+++ +F +L+ L +
Sbjct: 605 NQLTGIEPNAFEGASHIQELQLGENKIK--EISNKMFLGLHQLKTLNL 650
Score = 60 (26.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 27/103 (26%), Positives = 48/103 (46%)
Query: 5 LSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGI----FN--SKLRELEITGKDLKF 58
L+ N+L ++ L+ +L HL LK +QL GI F S ++EL++ +K
Sbjct: 577 LNDNELGRISSDGLFG---RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 633
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTL 101
I F + TL + + QI + G F+ + ++ + L
Sbjct: 634 ISNKMFLGLHQLK--TLNLYDNQISCVMPGSFEHLNSLTSLNL 674
Score = 58 (25.5 bits), Expect = 3.6e-12, Sum P(4) = 3.6e-12
Identities = 24/103 (23%), Positives = 45/103 (43%)
Query: 3 LDLSHNKLSVL--NMATLYSNVTKLQHLGTTILK-GDQL-QGIFNSKLRELEITGKDLKF 58
L L++N+L + N T +++ +L I G ++ +G LR L++ +
Sbjct: 153 LRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGA--QSLRSLQLDNNQITC 210
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTL 101
+D AF + LTL N + LP +F + + + L
Sbjct: 211 LDEHAFKGLVELEILTLN--NNNLTSLPHNIFGGLGRLRALRL 251
Score = 41 (19.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
L N I+ L + F +LR +++S+N + + D S
Sbjct: 353 LEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALS 391
Score = 38 (18.4 bits), Expect = 4.6e-14, Sum P(4) = 4.6e-14
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 540 ILNISHNRLRSLPRDVFSNT 559
++ S N+L+ +PR + + T
Sbjct: 749 VVRCSRNQLKEIPRGIPAET 768
>WB|WBGene00006593 [details] [associations]
symbol:tol-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007166 "cell
surface receptor signaling pathway" evidence=TAS] [GO:0009790
"embryo development" evidence=IMP] [GO:0006952 "defense response"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] [GO:0030424 "axon"
evidence=ND] [GO:0005057 "receptor signaling protein activity"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 GO:GO:0009792 GO:GO:0040007
GO:GO:0006952 GO:GO:0002119 GO:GO:0010171 GO:GO:0005622
GO:GO:0005623 GO:GO:0007166 GO:GO:0005057
GeneTree:ENSGT00700000104286 SUPFAM:SSF52200 HSSP:O60603
EMBL:FO080418 RefSeq:NP_001020983.1 ProteinModelPortal:Q9N5Z3
SMR:Q9N5Z3 DIP:DIP-24325N IntAct:Q9N5Z3 MINT:MINT-1108170
EnsemblMetazoa:C07F11.1 GeneID:171635 KEGG:cel:CELE_C07F11.1
UCSC:C07F11.1 CTD:171635 WormBase:C07F11.1 InParanoid:Q9N5Z3
OMA:NPYLVEI NextBio:872085 ArrayExpress:Q9N5Z3 Uniprot:Q9N5Z3
Length = 1221
Score = 238 (88.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 99/388 (25%), Positives = 180/388 (46%)
Query: 202 DLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFPYYIL 260
+L L L +LQ L++S N+L + + V ++L ++++S + L N +F
Sbjct: 160 ELPQRLLCSLPHLQVLNISSNELPSLRREESC--VAQQLLIVDLSRNRLTNIEQFL---- 213
Query: 261 NKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI---SKIHNNLFHFNIH--- 314
+ + + +++ N+I + + SL L ++ E N+I + + + H N+
Sbjct: 214 -RGIPAIRQISVAYNSIAEL-DLSLAT-PFLQQLDAEANRIVDLTSLPGTVVHVNLAGNA 270
Query: 315 -KRLKE----------IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
KR+ + + +S N +E S F + EL + SYN L S+ +
Sbjct: 271 LKRVPDAVAELASLVALNVSRNEIEAGNSSVFSS-PELEMLDASYNKLDSLPVEWLQKCE 329
Query: 364 NML-NIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+ ++ L N I+ + N NL LDL N+L+ F V SK NL LS
Sbjct: 330 KRIAHLHLEHNSIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPE-NSKIG--NLRLS 386
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT 482
NN + L E + ++SLDLS+N++ EVP + + L+K+ L N I +
Sbjct: 387 NNSL-ELLEPSSLSG-LKLESLDLSHNKLTEVPAAIGKV--EQLKKVDLSHNRIAKVYQY 442
Query: 483 AFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILN 542
+ L + L +N + + F L +D+S NEIS+L + F KLR ++
Sbjct: 443 VLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKDAFARCPKLRKIS 502
Query: 543 ISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+ N+++SL + + + +LD+S+N+
Sbjct: 503 MKMNKIKSLDEGLTEASGLRRLDVSHNE 530
Score = 210 (79.0 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 103/478 (21%), Positives = 209/478 (43%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTL-DLSHNKLS-----------VLNMATLYSNVTK 122
L++ N ELPS ++ +Q+ + DLS N+L+ + ++ Y+++ +
Sbjct: 172 LQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTNIEQFLRGIPAIRQISVAYNSIAE 231
Query: 123 LQ-HLGTTILKDREKXXXXXXXXXXRCNKITDLN--GNLFRHLQKSIVKAKK----NNNN 175
L L T L+ + + +N GN + + ++ + N +
Sbjct: 232 LDLSLATPFLQQLDAEANRIVDLTSLPGTVVHVNLAGNALKRVPDAVAELASLVALNVSR 291
Query: 176 NEDQVSDREKXXX-XXXXXXXRCNKITDLNGNLFRHLYN-LQELSLSFNKLQIIELNSNV 233
NE + + NK+ L + + L L N ++ +L V
Sbjct: 292 NEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIE--QLTGGV 349
Query: 234 FDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNY 293
LQ L++S + F +L +N + + L + NN+++ + SL L L
Sbjct: 350 LANATNLQTLDLSSNQLRV--FRDEVLPEN-SKIGNLRLSNNSLELLEPSSLSGL-KLES 405
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +NK++++ + ++LK++ LS+N + + +K+L+T+ LS N L+S
Sbjct: 406 LDLSHNKLTEVPAAIGKV---EQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQS 462
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
I F + + + ++ +S N+I ++ +AF P L K+ ++ NK+K + +T
Sbjct: 463 IGPYIFSDSSELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKIKSLD----EGLTEA 518
Query: 414 QTPMNLNLSNNYITNLYENDKKQA-PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
L++S+N I L K A P ++ L+ NN I + + +L+ + L
Sbjct: 519 SGLRRLDVSHNEILVL----KWSALPENLEILNADNNDINLLTAASMSPSTANLKSVSLS 574
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
N I ++A N LE L + +N +A + K L+ ++L N ++++ E
Sbjct: 575 NNGITIMNADQIPNS--LESLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLTVVATE 630
Score = 207 (77.9 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 99/382 (25%), Positives = 179/382 (46%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L +L L++S N+++ NS+VF E L++L+ S++ +S P L K + L
Sbjct: 281 LASLVALNVSRNEIEAG--NSSVFSSPE-LEMLDASYNKLDS--LPVEWLQKCEKRIAHL 335
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+++N+I+ + L N T+L ++L N++ + + N ++ +RLSNN LEL+
Sbjct: 336 HLEHNSIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPEN--SKIGNLRLSNNSLELL 393
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
E + LK L ++ LS+N L + K + + + LS N+I +Y + L
Sbjct: 394 EPSSLSGLK-LESLDLSHNKLTEVPAAIGK-VEQLKKVDLSHNRIAKVYQYVLNKIKQLH 451
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAPIY-----IKSL 444
+DL +N+L+ +FS+ + + ++ N + + + K I IKSL
Sbjct: 452 TVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKIKSL 511
Query: 445 D-----LSNNRIQEVPVNFL-----QTFADSLRKLYLDFNEIKHLDATAFGNLDV-LELL 493
D S R +V N + ++L L D N+I L A + L+ +
Sbjct: 512 DEGLTEASGLRRLDVSHNEILVLKWSALPENLEILNADNNDINLLTAASMSPSTANLKSV 571
Query: 494 SLEHNNIAVVVKRTFIGMPN-LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
SL +N I ++ +PN L+ +D+S N ++ L +LR LN+ N L +
Sbjct: 572 SLSNNGITIMNADQ---IPNSLESLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLTVVA 628
Query: 553 RDVFSNTIIE-----KLDISYN 569
+ S ++E K++IS N
Sbjct: 629 TE--SMKVVEAVHPLKVEISEN 648
Score = 146 (56.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 98/457 (21%), Positives = 194/457 (42%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
+ +++N ++ L+++ + +L I+ L G + + + G LK + P
Sbjct: 222 ISVAYNSIAELDLSLATPFLQQLDAEANRIVDLTSLPGT----VVHVNLAGNALKRV-PD 276
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTK 122
A + + + L ++ +IE S +F E +E LD S+NKL L + L +
Sbjct: 277 AVAELASL--VALNVSRNEIEAGNSSVFSSPE-LEM--LDASYNKLDSLPVEWLQKCEKR 331
Query: 123 LQHLGTTILKDREKXXXXXXXXXXRCNKIT-DLNGNLFRHLQKSIV--KAKKNN----NN 175
+ HL L+ N T DL+ N R + ++ +K N NN
Sbjct: 332 IAHLH---LEHNSIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNN 388
Query: 176 NEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFD 235
+ + + NK+T++ + + + L+++ LS N+ I ++ V +
Sbjct: 389 SLELLEPSSLSGLKLESLDLSHNKLTEVPAAIGK-VEQLKKVDLSHNR--IAKVYQYVLN 445
Query: 236 VFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYIN 295
++L +++S + S PY + + L L + NN I + + L I+
Sbjct: 446 KIKQLHTVDLSNNQLQSIG-PYIFSDSS--ELHSLDVSNNEISLLFKDAFARCPKLRKIS 502
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF-YNLKELNTITLSYNLLKSI 354
++ NKI + L + L+ + +S+N + +++ NL+ LN NLL +
Sbjct: 503 MKMNKIKSLDEGLTEAS---GLRRLDVSHNEILVLKWSALPENLEILNADNNDINLLTAA 559
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN-LVKLDLQDNKLKDFNLNVFSNITSK 413
+ + N+ ++ LS N I + NA +PN L LD+ +N+L + +K
Sbjct: 560 SMSP--STANLKSVSLSNNGITIM--NAD-QIPNSLESLDVSNNRLAKLGKTA---LAAK 611
Query: 414 QTPMNLNLSNNYITNLY-ENDKKQAPIYIKSLDLSNN 449
LNL N +T + E+ K ++ +++S N
Sbjct: 612 SQLRRLNLKGNLLTVVATESMKVVEAVHPLKVEISEN 648
Score = 115 (45.5 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 34/130 (26%), Positives = 56/130 (43%)
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
RL+ + ++ L I+ F+ L L T+ LS N L S+ F + + L+ N+
Sbjct: 785 RLQRLHINGTGLRSIQPKAFHTLPALKTLDLSDNSLISLSGEEFLKCGEVSQLFLNGNRF 844
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDF----NLNVFSNITSKQTPMNLNLSNNYITNLYE 431
+ F LPNL L L +N L+D + S I+ P+ + S +L+
Sbjct: 845 STLSRGIFEKLPNLKYLTLHNNSLEDIPQVLHSTALSKISLSSNPLRCDCSGGSQQHLHH 904
Query: 432 N-DKKQAPIY 440
D K P +
Sbjct: 905 RRDPKAHPFW 914
Score = 100 (40.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 75/359 (20%), Positives = 136/359 (37%)
Query: 41 IFNSKLRELEITGKDLKFIDPSAFDNIDACYDLT--LKITNTQIEELPSGLFDKIENIEQ 98
+F+S ELE+ +D + + C L + + IE+L G+ N++
Sbjct: 301 VFSSP--ELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLTGGVLANATNLQ- 357
Query: 99 MTLDLSHNKLSVLNMATLYSNVT----KLQHLGTTILKDREKXXXXXXXXXXRCNKITDL 154
TLDLS N+L V L N +L + +L+ NK+T++
Sbjct: 358 -TLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSLSGLKLESLDLSHNKLTEV 416
Query: 155 NGNLFRHLQKSIVKAKKNNNNNEDQ-VSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYN 213
+ + Q V N Q V ++ K N++ + +F
Sbjct: 417 PAAIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSN---NQLQSIGPYIFSDSSE 473
Query: 214 LQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYY---------ILNKNL 264
L L +S N++ + L + F KL+ + + + S + + + +
Sbjct: 474 LHSLDVSNNEISL--LFKDAFARCPKLRKISMKMNKIKSLDEGLTEASGLRRLDVSHNEI 531
Query: 265 NTLEWLAMDNN-NIKNIRNYSLYNLT--SLNYINLEYNKISKIHNNLFHFN---IHKRLK 318
L+W A+ N I N N + LT S++ +S +N + N I L+
Sbjct: 532 LVLKWSALPENLEILNADNNDINLLTAASMSPSTANLKSVSLSNNGITIMNADQIPNSLE 591
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM--LNIVLSFNQI 375
+ +SNN L + +L + L NLL + T S K + + L + +S N +
Sbjct: 592 SLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLTVVATESMKVVEAVHPLKVEISENPL 650
Score = 97 (39.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
I LS L ++T SF + + ++ ++ I P AF LP L LDL DN L +
Sbjct: 765 IILSGVTLPQLRTHSFIGRLRLQRLHINGTGLRSIQPKAFHTLPALKTLDLSDNSLISLS 824
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFA 463
F L L+ N + L ++ P +K L L NN ++++P L + A
Sbjct: 825 GEEFLKCGEVS---QLFLNGNRFSTLSRGIFEKLP-NLKYLTLHNNSLEDIP-QVLHSTA 879
Query: 464 DSLRKLYLDFNEIK 477
L K+ L N ++
Sbjct: 880 --LSKISLSSNPLR 891
Score = 87 (35.7 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 56/256 (21%), Positives = 111/256 (43%)
Query: 2 TLDLSHNKLSVLNMATLYSNVT----KLQHLGTTILKGDQLQGIFNSKLRELEITGKDLK 57
TLDLS N+L V L N +L + +L+ L G+ KL L+++ L
Sbjct: 358 TLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSLSGL---KLESLDLSHNKLT 414
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY 117
+ P+A ++ + L ++ +I ++ + +KI+ + T+DLS+N+L + ++
Sbjct: 415 EV-PAAIGKVEQLKKVDL--SHNRIAKVYQYVLNKIKQLH--TVDLSNNQLQSIG-PYIF 468
Query: 118 SNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNG--NLFRHLQKSIVKA----KK 171
S+ ++L L + + RC K+ ++ N + L + + +A +
Sbjct: 469 SDSSELHSLDVS----NNEISLLFKDAFARCPKLRKISMKMNKIKSLDEGLTEASGLRRL 524
Query: 172 NNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG-NLFRHLYNLQELSLSFNKLQIIELN 230
+ ++NE V N I L ++ NL+ +SLS N + I+
Sbjct: 525 DVSHNEILVLKWSALPENLEILNADNNDINLLTAASMSPSTANLKSVSLSNNGITIM--- 581
Query: 231 SNVFDVFEKLQLLEIS 246
N + L+ L++S
Sbjct: 582 -NADQIPNSLESLDVS 596
Score = 81 (33.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ L + + + + F +P L+ +DLS N + L+GE+F ++ L ++ NR
Sbjct: 786 LQRLHINGTGLRSIQPKAFHTLPALKTLDLSDNSLISLSGEEFLKCGEVSQLFLNGNRFS 845
Query: 550 SLPRDVF 556
+L R +F
Sbjct: 846 TLSRGIF 852
Score = 62 (26.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/109 (22%), Positives = 46/109 (42%)
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
++ L ++ ++ + T +L+ L L N + L F + L L N
Sbjct: 786 LQRLHINGTGLRSIQPKAFHTLP-ALKTLDLSDNSLISLSGEEFLKCGEVSQLFLNGNRF 844
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
+ + + F +PNL+ + L N + + Q S L +++S N LR
Sbjct: 845 STLSRGIFEKLPNLKYLTLHNNSLEDIP--QVLHSTALSKISLSSNPLR 891
Score = 60 (26.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 497 HNNIAVVVKRTFI--GMP-NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-P 552
H N ++V KR F+ +P + I LS + L F +L+ L+I+ LRS+ P
Sbjct: 742 HGNSSMVPKREFVVSELPVSATEIILSGVTLPQLRTHSFIGRLRLQRLHINGTGLRSIQP 801
Query: 553 RDVFSNTIIEKLDISYN 569
+ + ++ LD+S N
Sbjct: 802 KAFHTLPALKTLDLSDN 818
Score = 48 (22.0 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+FIG LQ + ++ + + + F+ L+ L++S N L SL + F
Sbjct: 779 SFIGRLRLQRLHINGTGLRSIQPKAFHTLPALKTLDLSDNSLISLSGEEF 828
>UNIPROTKB|E2QXQ1 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AAEX03013291 RefSeq:XP_849372.1
Ensembl:ENSCAFT00000008533 GeneID:485513 KEGG:cfa:485513
NextBio:20859499 Uniprot:E2QXQ1
Length = 958
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 46/160 (28%), Positives = 82/160 (51%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNE 475
+ ++ N I +L E + PIY L LS N + + P F+ S+ L+L N
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIY--HLLLSGNLLNRLYPNEFVNYTGASI--LHLGSNV 116
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
I+ ++ AF L L L L +N + ++ TF+G+ +L+ + + +N IS++ F
Sbjct: 117 IQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKL 176
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
L++L ++ N L SLP ++F + LD+ N+ K+ P
Sbjct: 177 HLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLP 216
Score = 154 (59.3 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N + + N T + ++L N I I FH + + L+ + L+NN LEL
Sbjct: 86 LLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFH-GL-RGLRRLHLNNNKLEL 143
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + + YN + I+ +F L+ + ++L+ N + + N F +P L
Sbjct: 144 LRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-L 202
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 203 THLDLRGNRLK 213
Score = 137 (53.3 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 47/162 (29%), Positives = 77/162 (47%)
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLR 467
N+ +N+N I ++ E K P K + L+ N I V +FL+ A L
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPK--PYNPKKMYLTENYIAVVRRSDFLE--ATGLD 436
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L+L N I + AFG+L L L L N I + F G+ +LQ + L +N I +
Sbjct: 437 LLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREI 496
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N L+++P VFS + +L++ N
Sbjct: 497 QSGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLRLNLRSN 538
Score = 133 (51.9 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 38/153 (24%), Positives = 79/153 (51%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N I +R T L+ ++L N+IS I + F ++ L+ + L+ N +E +
Sbjct: 416 LTENYIAVVRRSDFLEATGLDLLHLGNNRISMIQDRAFG-DL-TNLRRLYLNGNRIERLS 473
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
+ FY L+ L + L YNL++ I++ +F + N+ + L+ N ++ + F L L++
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNLLQTMPSGVFSGL-TLLR 532
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L+L+ N +L V + ++ + ++L +N
Sbjct: 533 LNLRSNHFT--SLPVSGVLDQLKSLIQIDLHDN 563
Score = 128 (50.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L NN + +I+ F +L L + L+ N ++ + F L ++ + L +N I+ I
Sbjct: 438 LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQ 497
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
F +PNL L L +N L+ VFS +T + LNL +N+ T+L
Sbjct: 498 SGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTL----LRLNLRSNHFTSL 543
Score = 126 (49.4 bits), Expect = 0.00030, P = 0.00030
Identities = 41/154 (26%), Positives = 76/154 (49%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N L + + F N + + L N+++ I+T +F L + + L+ N+++ + +
Sbjct: 88 LSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDD 147
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F+ L +L L + N + N F + Q L L++N +++L N + P+
Sbjct: 148 TFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQV---LILNDNLLSSLPNNLFRFVPL-- 202
Query: 442 KSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFN 474
LDL NR++ +P V LQ D + +L L+ N
Sbjct: 203 THLDLRGNRLKLLPYVGLLQHM-DKVVELQLEEN 235
Score = 119 (46.9 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N +++++ N F N + + L +N ++ IE+ F+ L+ L + L+ N L+
Sbjct: 85 HLLLSGNLLNRLYPNEF-VN-YTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F L ++ + + +N I I PNAF L L L L DN L N+F
Sbjct: 143 LLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLF 197
Score = 98 (39.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
+ + L LS N L L N F + +L + ++ E + L L L
Sbjct: 81 FPIYHLLLSGNLLN--RLYPNEFVNYTGASILHLGSNVIQDIETGAF---HGLRGLRRLH 135
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
++NN ++ +R+ + L SL Y+ ++YN IS I N F +H L+ + L++N L +
Sbjct: 136 LNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFG-KLHL-LQVLILNDNLLSSLP 193
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSF-KNLNNMLNIVLSFN 373
++ F L + L N LK + ++++ ++ + L N
Sbjct: 194 NNLF-RFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN 235
Score = 89 (36.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/104 (26%), Positives = 55/104 (52%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I D+ F L L+ L L+ NKL++ L + F E L+ L++ ++ + E P
Sbjct: 115 NVIQDIETGAFHGLRGLRRLHLNNNKLEL--LRDDTFLGLESLEYLQVDYNYISVIE-PN 171
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
K L+ L+ L +++N + ++ N +L+ L +++L N++
Sbjct: 172 -AFGK-LHLLQVLILNDNLLSSLPN-NLFRFVPLTHLDLRGNRL 212
Score = 66 (28.3 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 18 LYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKI 77
L+ N KL+ +L+ D G+ L L++ + I+P+AF + L L
Sbjct: 134 LHLNNNKLE-----LLRDDTFLGL--ESLEYLQVDYNYISVIEPNAFGKLHLLQVLILN- 185
Query: 78 TNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ + LP+ LF + LDL N+L +L L ++ K+ L
Sbjct: 186 -DNLLSSLPNNLF---RFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVEL 230
Score = 43 (20.2 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 22/106 (20%), Positives = 44/106 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L + +N +SV+ KL L IL + L + N+ R + +T DL+
Sbjct: 158 LQVDYNYISVIEPNAF----GKLHLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLK 213
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
+ + K+ Q+EE P ++ +++ +S++ L
Sbjct: 214 LLPYVGLLQHMD-KVVELQLEENPWNCSCELISLKDWLDSISYSAL 258
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 165 (63.1 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 71/318 (22%), Positives = 138/318 (43%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K L L+ + + NN + I + + S++ ++L N++ I + +F + + L+ +
Sbjct: 424 KKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFR-GL-EGLRTLM 481
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L NN + I +D+F L+ + ++L N + +I +F L + + L N N
Sbjct: 482 LRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPF-----N 536
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND-----KKQ 436
L L L+ K+ N + +Q P+ S ++ + + + Q
Sbjct: 537 CNCQLAWLGDW-LRKRKIVTGNPRCQNPDFLRQIPLQDVASPDFRCEEGQEEGGCLPRPQ 595
Query: 437 APIYIKSLDL----SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
P LD SN +Q +P + ++ +LYLD N+ + A L+L
Sbjct: 596 CPQECACLDTVVRCSNKHLQTLP----KGIPKNVTELYLDGNQFTLVPAQ-LSTFKYLQL 650
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
+ L +N I+ + +F M L + LS+N + + F LR+L++ N + +L
Sbjct: 651 VDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQ 710
Query: 553 RDVFSN-TIIEKLDISYN 569
+F++ T + L I N
Sbjct: 711 EGIFADVTSLSHLAIGAN 728
Score = 155 (59.6 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ I LE N I I F + +++L+ I LSNN + I D F L+ LN++ L N
Sbjct: 172 AMTEIRLELNGIKSIPPGAF--SPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGN 229
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
+ + F L + ++L+ N+I I +AF +L NL L L DNK++ F++
Sbjct: 230 KITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 289
Query: 410 ITSKQTPMNLNLSNN 424
+ + QT L+L+ N
Sbjct: 290 LRAIQT---LHLAQN 301
Score = 155 (59.6 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 90/343 (26%), Positives = 148/343 (43%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N++ I+E +F+KL L +I+ S +E + E L +
Sbjct: 406 ELRLNNNEISILEATG----MFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSE-LHLTA 460
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N +++IR+ L L + L N+IS IHN+ F + RL + L +N + I
Sbjct: 461 NQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRL--LSLYDNQIATISPGA 518
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLPNLVK-L 392
F L+ L+T+ NLL + F N N L + + + K + N P+ ++ +
Sbjct: 519 FDTLQALSTL----NLLAN----PF-NCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQI 569
Query: 393 DLQDNKLKDFNLNVFSN----ITSKQTPMNLNLSNNYI--TNLY-ENDKKQAPIYIKSLD 445
LQD DF + Q P + + +N + + K P + L
Sbjct: 570 PLQDVASPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQTLPKGIPKNVTELY 629
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L TF L+ + L N+I L ++F N+ L L L +N++ +
Sbjct: 630 LDGNQFTLVPAQ-LSTFK-YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPP 687
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F G+ +L+++ L N+IS L F L L I N L
Sbjct: 688 LAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPL 730
Score = 138 (53.6 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 36/133 (27%), Positives = 70/133 (52%)
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
Q L L+NN I+ L + ++K ++LSNN++ E+ + A S+ +L+L
Sbjct: 402 QATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAA-SVSELHLTA 460
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+++ + + F L+ L L L +N I+ + +F G+ N++++ L N+I+ ++ F
Sbjct: 461 NQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFD 520
Query: 534 FSFKLRILNISHN 546
L LN+ N
Sbjct: 521 TLQALSTLNLLAN 533
Score = 113 (44.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P + + L N I+ +P + LR++ L N+I + AF L L L L
Sbjct: 170 PEAMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG 228
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + + F G+ LQ++ L+ N+I+ + + F L +L++ N+++SL + F+
Sbjct: 229 NKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFT 288
Query: 558 NT-IIEKLDISYN 569
+ I+ L ++ N
Sbjct: 289 SLRAIQTLHLAQN 301
Score = 108 (43.1 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
N+ + + EIRL N ++ I F ++L I LS N + I +F+ L ++ ++VL
Sbjct: 168 NLPEAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY 227
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I + F L L L L NK+ L+ F ++ Q L+L +N I +L +
Sbjct: 228 GNKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDL---QNLSLLSLYDNKIQSLAK 284
Query: 432 NDKKQAPIYIKSLDLSNN 449
I++L L+ N
Sbjct: 285 GTFTSLRA-IQTLHLAQN 301
Score = 99 (39.9 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIAV 502
++ S+ ++ ++P Q A+ L L+ NEI L+AT F L L+ ++L +N ++
Sbjct: 386 VECSSLKLTKIPERVPQATAE----LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSE 441
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-I 561
+ F G ++ + L+ N++ + F LR L + +NR+ + D F+ +
Sbjct: 442 IEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNV 501
Query: 562 EKLDISYNQ-DKIRPG 576
L + NQ I PG
Sbjct: 502 RLLSLYDNQIATISPG 517
Score = 96 (38.9 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 35/136 (25%), Positives = 64/136 (47%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
+ ++ N IK+I + L I+L N+IS+I + F + + L + L N +
Sbjct: 176 IRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQ-GL-RSLNSLVLYGNKITD 233
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F L L + L+ N + I+ +F++L N+ + L N+I+ + F +L +
Sbjct: 234 LPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAI 293
Query: 390 VKLDLQDNK-LKDFNL 404
L L N + D NL
Sbjct: 294 QTLHLAQNPFICDCNL 309
Score = 90 (36.7 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELL 493
++ P L L+NN I + + L+K+ L N++ ++ AF G V EL
Sbjct: 398 ERVPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSEL- 456
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N + + F G+ L+ + L N IS + + F +R+L++ N++ ++
Sbjct: 457 HLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISP 516
Query: 554 DVF 556
F
Sbjct: 517 GAF 519
Score = 79 (32.9 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS 252
NKITDL +F L+ LQ L L+ NK+ I L D F+ LQ L + SL+++
Sbjct: 229 NKITDLPQGVFGGLFTLQLLLLNANKINCIRL-----DAFQDLQNLSL-LSLYDN 277
Score = 76 (31.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N +++I +F+ ++ N+ L NQI I AF L L L L +N + ++
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVS 61
Query: 406 VFSNITSKQTPMNLNLSNNYI 426
F+++ +T L +N++
Sbjct: 62 SFNHMPKLRT---FRLHSNHL 79
Score = 75 (31.5 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N ++ I F +L + L N + I+ +F+ L + + L+ N I I +
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVS 61
Query: 382 AFVNLPNLVKLDLQDNKL 399
+F ++P L L N L
Sbjct: 62 SFNHMPKLRTFRLHSNHL 79
Score = 74 (31.1 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
LK ++L N + IE F L+ L +TL+ N + +I +SF ++ + L N +
Sbjct: 21 LKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 79
Score = 73 (30.8 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KLR ++++ + I P AF + + L L +I +LP G+F + + Q+ L L+
Sbjct: 196 KLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY--GNKITDLPQGVFGGLFTL-QLLL-LN 251
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
NK++ + + LQ+L L D +
Sbjct: 252 ANKINCIRLDAFQD----LQNLSLLSLYDNK 278
Score = 72 (30.4 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 221 FNKLQIIELNSNVF-----DVFEKLQLLEISFSLFNSN--EFPYYILNKNLNTLEWLAMD 273
+ KL+ I+L++N D F+ L+ L S L+ + + P + L TL+ L ++
Sbjct: 194 YRKLRRIDLSNNQISEIAPDAFQGLRSLN-SLVLYGNKITDLPQGVFG-GLFTLQLLLLN 251
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
N I IR + +L +L+ ++L NKI + F
Sbjct: 252 ANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTF 287
Score = 68 (29.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 21/80 (26%), Positives = 36/80 (45%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N I+ I + T L + L+ N+I I F + L+ + L+NN + I
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFR--ALRGLEVLTLNNNNITTIP 59
Query: 332 SDTFYNLKELNTITLSYNLL 351
+F ++ +L T L N L
Sbjct: 60 VSSFNHMPKLRTFRLHSNHL 79
Score = 63 (27.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 28/111 (25%), Positives = 54/111 (48%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+DLS+N++S + L+ L + +L G+++ QG+F L+ L + +
Sbjct: 200 IDLSNNQISEIAPDAFQG----LRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNANKI 255
Query: 57 KFIDPSAFDNIDACYDLTL-KITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
I AF ++ +L+L + + +I+ L G F + I+ TL L+ N
Sbjct: 256 NCIRLDAFQDLQ---NLSLLSLYDNKIQSLAKGTFTSLRAIQ--TLHLAQN 301
Score = 58 (25.5 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L+ L +D N I I + L L + L N I+ I + FN +L+ RL +N+
Sbjct: 21 LKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIP--VSSFNHMPKLRTFRLHSNH 78
Query: 327 L 327
L
Sbjct: 79 L 79
Score = 58 (25.5 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
NKI + + F+ L NL LSL NK+Q L F +Q L ++ + F
Sbjct: 253 NKINCIRLDAFQDLQNLSLLSLYDNKIQ--SLAKGTFTSLRAIQTLHLAQNPF 303
Score = 48 (22.0 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
L LE L ++NNNI I S ++ L L N +
Sbjct: 42 LRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 79
Score = 46 (21.3 bits), Expect = 3.1e-16, Sum P(3) = 3.1e-16
Identities = 13/54 (24%), Positives = 32/54 (59%)
Query: 72 DL-TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQ 124
DL L++ QI + G F + +E +TL+ +N ++ + +++ ++++ KL+
Sbjct: 20 DLKNLQLDKNQIGCIEEGAFRALRGLEVLTLN--NNNITTIPVSS-FNHMPKLR 70
Score = 46 (21.3 bits), Expect = 3.1e-16, Sum P(3) = 3.1e-16
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI-SFSLF 250
N+I + FR L L+ L+L+ N + I ++S F+ KL+ + S LF
Sbjct: 29 NQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSS--FNHMPKLRTFRLHSNHLF 80
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 242 (90.2 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 91/355 (25%), Positives = 166/355 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N ++ + G F LY+L+ L L N+L I + ++++ LQ L + +L +
Sbjct: 99 NHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEA-LWEL-PSLQSLRLDANLISLVPDGS 156
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ + L L L +D+N + + +L +L +L + L N+IS + + F N+ L
Sbjct: 157 F---EGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQ-NLSS-L 211
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L NN ++ + + +F L L T+ L++N L+ + + L + + N I+
Sbjct: 212 VVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQEFPV-AIRTLGRLQELGFHNNNIQT 270
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I AF+ P L + DN ++ + F ++ T LS N +++ E +
Sbjct: 271 IPEKAFLGNPLLQTIHFYDNPIQFVGRSAFRHLPRLHT-----LSLNGASDIQEFPDLKG 325
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
++ L L+ +Q +P Q L+ L L N+I+ L + LE + L+H
Sbjct: 326 TTSLEILTLTRAGLQRLPPGMCQQLP-RLQVLELSHNQIQGLPS--LHRCQKLEKIGLQH 382
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
N I + TF + +LQ +DLS+N I + E F L L+++HN+L LP
Sbjct: 383 NRIWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFATLRALVKLDLTHNQLTMLP 437
Score = 232 (86.7 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 94/358 (26%), Positives = 168/358 (46%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
L LS N L EL +F L+ L +S + + + P + L +L+ L + NN
Sbjct: 70 LDLSMNNLT--ELQPGLFRHLSFLEELRLSGN--HLSHIPGQAFS-GLYSLKILMLQNNQ 124
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
+ I +L+ L SL + L+ N IS + + F + L+ + L +N L +
Sbjct: 125 LGGIPAEALWELPSLQSLRLDANLISLVPDGSFE-GL-PALRHLWLDDNALTEVPVGALS 182
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
+L L +TL+ N + + +F+NL++++ + L N+I+++ ++F L +L LDL
Sbjct: 183 SLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNH 242
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
N+L++F + + + Q L NN I + E P+ ++++ +N IQ V
Sbjct: 243 NELQEFPVAI-RTLGRLQ---ELGFHNNNIQTIPEKAFLGNPL-LQTIHFYDNPIQFVGR 297
Query: 457 NFLQTFADSLRKLYL----DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP 512
+ + L L L D E L T LE+L+L + + +P
Sbjct: 298 SAFRHLP-RLHTLSLNGASDIQEFPDLKGTTS-----LEILTLTRAGLQRLPPGMCQQLP 351
Query: 513 NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
LQ+++LS N+I L + KL + + HNR+ + D FS T ++ LD+S+N
Sbjct: 352 RLQVLELSHNQIQGLPS--LHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWN 407
Score = 215 (80.7 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 77/313 (24%), Positives = 151/313 (48%)
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
L ++L+ LE L + N++ +I + L SL + L+ N++ I + + L+
Sbjct: 84 LFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEAL-WELPS-LQS 141
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+RL N + L+ +F L L + L N L + + +L + + L+ N+I ++
Sbjct: 142 LRLDANLISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVP 201
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
AF NL +LV L L +N+++ + F + S +T L+L++N + + +
Sbjct: 202 DYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLET---LDLNHNELQEFPVAIRTLGRL 258
Query: 440 YIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+ L NN IQ +P FL L+ ++ N I+ + +AF +L L LSL N
Sbjct: 259 --QELGFHNNNIQTIPEKAFLGN--PLLQTIHFYDNPIQFVGRSAFRHLPRLHTLSL--N 312
Query: 499 NIAVVVKRTFI-GMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
+ + + + G +L+I+ L+ + L +L++L +SHN+++ LP +
Sbjct: 313 GASDIQEFPDLKGTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQIQGLP-SLHR 371
Query: 558 NTIIEKLDISYNQ 570
+EK+ + +N+
Sbjct: 372 CQKLEKIGLQHNR 384
Score = 198 (74.8 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 80/308 (25%), Positives = 144/308 (46%)
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+L + NN+ ++ +L+ L + L N +S I F ++ LK + L NN L
Sbjct: 69 YLDLSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFS-GLYS-LKILMLQNNQLG 126
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I ++ + L L ++ L NL+ + SF+ L + ++ L N + + A +LP
Sbjct: 127 GIPAEALWELPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPA 186
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L + L N++ F N++S L+L NN I +L + + +++LDL++
Sbjct: 187 LQAMTLALNRISHVPDYAFQNLSSLVV---LHLHNNRIQHLGAHSFEGLHS-LETLDLNH 242
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLEHNNIAVVVKRT 507
N +QE PV ++T L++L N I+ + AF GN +L+ + N I V +
Sbjct: 243 NELQEFPVA-IRTLG-RLQELGFHNNNIQTIPEKAFLGN-PLLQTIHFYDNPIQFVGRSA 299
Query: 508 FIGMPNLQIIDLS----FNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IE 562
F +P L + L+ E L G + L IL ++ L+ LP + ++
Sbjct: 300 FRHLPRLHTLSLNGASDIQEFPDLKG-----TTSLEILTLTRAGLQRLPPGMCQQLPRLQ 354
Query: 563 KLDISYNQ 570
L++S+NQ
Sbjct: 355 VLELSHNQ 362
Score = 181 (68.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 95/400 (23%), Positives = 171/400 (42%)
Query: 37 QLQ-GIFN--SKLRELEITGKDLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDK 92
+LQ G+F S L EL ++G L I AF + Y L L + N Q+ +P+ +
Sbjct: 79 ELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGL---YSLKILMLQNNQLGGIPAEALWE 135
Query: 93 IENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLG------TTILKDREKXXXXXXXXXX 146
+ +++ + LD N +S++ + + + L+HL T +
Sbjct: 136 LPSLQSLRLDA--NLISLVPDGS-FEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTL 192
Query: 147 RCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGN 206
N+I+ + F++L S+V +NN + + + N++ +
Sbjct: 193 ALNRISHVPDYAFQNLS-SLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQEFPVA 251
Query: 207 LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNT 266
+ R L LQEL N +Q I + F LL+ N +F ++L
Sbjct: 252 I-RTLGRLQELGFHNNNIQTIPEKA-----FLGNPLLQTIHFYDNPIQFVGRSAFRHLPR 305
Query: 267 LEWLAMDNNNIKNIRNY-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
L L++ N +I+ + L TSL + L + ++ + + RL+ + LS+N
Sbjct: 306 LHTLSL--NGASDIQEFPDLKGTTSLEILTLTRAGLQRLPPGMCQ-QL-PRLQVLELSHN 361
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
++ + S + ++L I L +N + I +F L ++ + LS+N I+ I+P AF
Sbjct: 362 QIQGLPS--LHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFAT 419
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
L LVKLDL N+L L + + NL LS +
Sbjct: 420 LRALVKLDLTHNQLTMLPLAGLGGLVHLKLKGNLGLSQAF 459
Score = 174 (66.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 89/389 (22%), Positives = 170/389 (43%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNL 207
N +T+L LFRHL S ++ + + N+ + + + N++ +
Sbjct: 75 NNLTELQPGLFRHL--SFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEA 132
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
L +LQ L L N + ++ S F+ L+ L + + E P L+ +L L
Sbjct: 133 LWELPSLQSLRLDANLISLVPDGS--FEGLPALRHLWLDDNALT--EVPVGALS-SLPAL 187
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
+ + + N I ++ +Y+ NL+SL ++L N+I + + F +H L+ + L++N L
Sbjct: 188 QAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFE-GLHS-LETLDLNHNEL 245
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+ L L + N +++I +F + I N I+++ +AF +LP
Sbjct: 246 QEFPV-AIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFRHLP 304
Query: 388 NLVKLDLQD-NKLKDF-------NLNVFSNITS----------KQTP--MNLNLSNNYIT 427
L L L + +++F +L + + + +Q P L LS+N I
Sbjct: 305 RLHTLSLNGASDIQEFPDLKGTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQIQ 364
Query: 428 NLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNL 487
L + Q ++ + L +NRI E+ + SL+ L L +N I+ + AF L
Sbjct: 365 GLPSLHRCQK---LEKIGLQHNRIWEIGADTFSQLT-SLQALDLSWNAIRSIHPEAFATL 420
Query: 488 DVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
L L L HN + ++ G+ +L++
Sbjct: 421 RALVKLDLTHNQLTMLPLAGLGGLVHLKL 449
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/247 (27%), Positives = 112/247 (45%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
++H + LS N L ++ F +L L + LS N L I +F L ++ ++L
Sbjct: 62 DLHPLTAYLDLSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQ 121
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
NQ+ I A LP+L L L N + F + + + +L L +N +T +
Sbjct: 122 NNQLGGIPAEALWELPSLQSLRLDANLISLVPDGSFEGLPALR---HLWLDDNALTEVPV 178
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
P ++++ L+ NRI VP Q + SL L+L N I+HL A +F L LE
Sbjct: 179 GALSSLPA-LQAMTLALNRISHVPDYAFQNLS-SLVVLHLHNNRIQHLGAHSFEGLHSLE 236
Query: 492 LLSLEHNNIAV--VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L L HN + V RT +G LQ + N I + + F + L+ ++ N ++
Sbjct: 237 TLDLNHNELQEFPVAIRT-LG--RLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQ 293
Query: 550 SLPRDVF 556
+ R F
Sbjct: 294 FVGRSAF 300
Score = 157 (60.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 55/205 (26%), Positives = 91/205 (44%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
LS N + + P F +L L +L L N L FS + S + M L NN + +
Sbjct: 72 LSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILM---LQNNQLGGI 128
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
+ P ++SL L N I VP + +LR L+LD N + + A +L
Sbjct: 129 PAEALWELPS-LQSLRLDANLISLVPDGSFEGLP-ALRHLWLDDNALTEVPVGALSSLPA 186
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ ++L N I+ V F + +L ++ L N I L F L L+++HN L+
Sbjct: 187 LQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQ 246
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIR 574
P V T+ ++ ++ + I+
Sbjct: 247 EFP--VAIRTLGRLQELGFHNNNIQ 269
Score = 44 (20.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSH-NKLSVLNMATLYS-NVTKLQH 125
L ++ + EL GLF + +E++ L +H + + + LYS + LQ+
Sbjct: 70 LDLSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQN 122
>UNIPROTKB|E1B8X9 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:HHRGPAL EMBL:DAAA02033829 EMBL:DAAA02033830 IPI:IPI00697816
Ensembl:ENSBTAT00000013364 Uniprot:E1B8X9
Length = 901
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 46/160 (28%), Positives = 82/160 (51%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNE 475
+ ++ N I +L E + PIY L LS N + + P F+ S+ L+L N
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIY--HLLLSGNLLSRLYPNEFVNYTGASI--LHLGSNV 116
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
I+ ++ AF L L L L +N + ++ TF+G+ +L+ + + +N IS++ F
Sbjct: 117 IQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKL 176
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
L++L ++ N L SLP ++F + LD+ N+ K+ P
Sbjct: 177 HLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLP 216
Score = 154 (59.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N + + N T + ++L N I I FH + + L+ + L+NN LEL
Sbjct: 86 LLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFH-GL-RGLRRLHLNNNKLEL 143
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + + YN + I+ +F L+ + ++L+ N + + N F +P L
Sbjct: 144 LRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-L 202
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 203 THLDLRGNRLK 213
Score = 136 (52.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLR 467
N+ +N+N I ++ E K P K + L+ N I V +FL+ A L
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPK--PYNPKKMYLTENYIALVRRSDFLE--ATGLD 436
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L+L N I + AFG+L L L L N I + F G+ +LQ + L +N I +
Sbjct: 437 LLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREI 496
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N L++LP VFS + +L++ N
Sbjct: 497 QPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLTLLRLNLRSN 538
Score = 136 (52.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L NN + +I+ F +L L + L+ N ++ + F L ++ + L +N I+ I
Sbjct: 438 LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQ 497
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
P F +PNL L L +N L+ VFS +T + LNL +N+ T+L
Sbjct: 498 PGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLTL----LRLNLRSNHFTSL 543
Score = 135 (52.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 37/142 (26%), Positives = 72/142 (50%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N I +R T L+ ++L N+IS I + F ++ L+ + L+ N +E +
Sbjct: 416 LTENYIALVRRSDFLEATGLDLLHLGNNRISMIQDRAFG-DL-TNLRRLYLNGNRIERLS 473
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
+ FY L+ L + L YNL++ I+ +F + N+ + L+ N ++ + F L L++
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGL-TLLR 532
Query: 392 LDLQDNKLKDFNLN-VFSNITS 412
L+L+ N ++ V +TS
Sbjct: 533 LNLRSNHFTSLPVSRVLDQLTS 554
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 41/154 (26%), Positives = 76/154 (49%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N L + + F N + + L N+++ I+T +F L + + L+ N+++ + +
Sbjct: 88 LSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDD 147
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F+ L +L L + N + N F + Q L L++N +++L N + P+
Sbjct: 148 TFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQV---LILNDNLLSSLPNNLFRFVPL-- 202
Query: 442 KSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFN 474
LDL NR++ +P V LQ D + +L L+ N
Sbjct: 203 THLDLRGNRLKLLPYVGLLQHM-DKVVELQLEEN 235
Score = 125 (49.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 51/193 (26%), Positives = 96/193 (49%)
Query: 213 NLQ--ELSLSFN----KLQ-IIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
NLQ +L L+ N K++ I EL ++ +K+ L E +L ++F
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPKPYNP-KKMYLTENYIALVRRSDF------LEAT 433
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
L+ L + NN I I++ + +LT+L + L N+I ++ LF + + L+ + L N
Sbjct: 434 GLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELF-YGLQS-LQYLFLQYN 491
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
+ I+ TF + L + L+ NLL+++ + F L +L + L N + + ++
Sbjct: 492 LIREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLT-LLRLNLRSNHFTSLPVSRVLD 550
Query: 386 -LPNLVKLDLQDN 397
L +L+++DL DN
Sbjct: 551 QLTSLIQIDLHDN 563
Score = 122 (48.0 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 34/115 (29%), Positives = 60/115 (52%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N +S+++ N F N + + L +N ++ IE+ F+ L+ L + L+ N L+
Sbjct: 85 HLLLSGNLLSRLYPNEF-VN-YTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F L ++ + + +N I I PNAF L L L L DN L N+F
Sbjct: 143 LLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLF 197
Score = 98 (39.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
+ + L LS N L L N F + +L + ++ E + L L L
Sbjct: 81 FPIYHLLLSGNLLS--RLYPNEFVNYTGASILHLGSNVIQDIETGAF---HGLRGLRRLH 135
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
++NN ++ +R+ + L SL Y+ ++YN IS I N F +H L+ + L++N L +
Sbjct: 136 LNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFG-KLHL-LQVLILNDNLLSSLP 193
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSF-KNLNNMLNIVLSFN 373
++ F L + L N LK + ++++ ++ + L N
Sbjct: 194 NNLF-RFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN 235
Score = 89 (36.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 28/104 (26%), Positives = 55/104 (52%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I D+ F L L+ L L+ NKL++ L + F E L+ L++ ++ + E P
Sbjct: 115 NVIQDIETGAFHGLRGLRRLHLNNNKLEL--LRDDTFLGLESLEYLQVDYNYISVIE-PN 171
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
K L+ L+ L +++N + ++ N +L+ L +++L N++
Sbjct: 172 -AFGK-LHLLQVLILNDNLLSSLPN-NLFRFVPLTHLDLRGNRL 212
Score = 73 (30.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N + L+ N I + + F+ L L L +N++ F ++T+ + L L+
Sbjct: 410 NPKKMYLTENYIALVRRSDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLR---RLYLNG 466
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N I L + ++ L L N I+E+ +L+ L+L+ N ++ L +
Sbjct: 467 NRIERL-SPELFYGLQSLQYLFLQYNLIREIQPGTFDP-VPNLQLLFLNNNLLQTLPSGV 524
Query: 484 FGNLDVLELLSLEHNNI-AVVVKRTFIGMPNLQIIDLSFN 522
F L +L L +L N+ ++ V R + +L IDL N
Sbjct: 525 FSGLTLLRL-NLRSNHFTSLPVSRVLDQLTSLIQIDLHDN 563
Score = 66 (28.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 18 LYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKI 77
L+ N KL+ +L+ D G+ L L++ + I+P+AF + L L
Sbjct: 134 LHLNNNKLE-----LLRDDTFLGL--ESLEYLQVDYNYISVIEPNAFGKLHLLQVLILN- 185
Query: 78 TNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ + LP+ LF + LDL N+L +L L ++ K+ L
Sbjct: 186 -DNLLSSLPNNLF---RFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVEL 230
Score = 43 (20.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 22/106 (20%), Positives = 44/106 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L + +N +SV+ KL L IL + L + N+ R + +T DL+
Sbjct: 158 LQVDYNYISVIEPNAF----GKLHLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLK 213
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
+ + K+ Q+EE P ++ +++ +S++ L
Sbjct: 214 LLPYVGLLQHMD-KVVELQLEENPWNCSCELISLKDWLDSISYSAL 258
>UNIPROTKB|F1NDB4 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
GO:GO:0010628 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 OMA:CCGNGWL EMBL:AADN02059354
IPI:IPI00584082 Ensembl:ENSGALT00000001192 Uniprot:F1NDB4
Length = 640
Score = 235 (87.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 141/552 (25%), Positives = 229/552 (41%)
Query: 7 HNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDN 66
HNK L+ NV K+ G I + F + L+ L+++ + FI P F +
Sbjct: 2 HNKELRQIPRELHPNVNKIDLSGNLIQSIPDMPLPFYTSLQCLDLSSNQISFITPGVFAH 61
Query: 67 IDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATLY-SNVTKLQ 124
+ + ++ L N + EL + I + ++ LDLSHN L MA + L+
Sbjct: 62 MTSLLEINL--ANNNLYELAQTGTEGIGFLPKVEILDLSHNSL-YNGMAEYFIKRAPALR 118
Query: 125 HL---GTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKN------NNN 175
+L G +I+ K DL N+ +++ + N + N
Sbjct: 119 YLSLAGNSIIMISHKMFQGSPNLVE-----IDLQSNIIMEIEEGAFETLLNLSRLNLSMN 173
Query: 176 NEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFD 235
+ +SD N I + Y+L+ L LS NKL L VF
Sbjct: 174 SITCISDFNLRQLEILDLSR--NSIESFHTTESDDEYSLKCLDLSENKL----LRFPVFP 227
Query: 236 VFEKLQLLEISFSLFN-SNEFPYYILNKNLNTLEWLAMDNNNI--KNIRNYSLYNLTSLN 292
KL L +S +L + E +N N EWL + + K RN S NL+ L
Sbjct: 228 QVNKLVTLNLSKNLIQLTAESSRNKMNYMEN--EWLDAPFHLLDQKQSRNKSSLNLSHLA 285
Query: 293 YINLEYNKISKIHNNLFH--FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNL 350
Y++L YN+I I + F F++H + LS N L+ E + L L + LSYN
Sbjct: 286 YLDLSYNEIKSIPDEFFESMFSLHT----LNLSKNCLQTFEVTSDSTLVSLTVLDLSYNA 341
Query: 351 LKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNI 410
L+S+ + L N+ + + N ++ + + F L +L L+LQ N + +++S +
Sbjct: 342 LQSLLLHA-DTLLNLKELYIQNNHLQVLQFDIFSRLTSLRWLNLQSNNIT--LCSMYSGL 398
Query: 411 TSKQTPMNLNLSNNYIT-------NLYENDKKQAPI--YIKS----LDLSNNRIQEVPVN 457
++ N +++ +L +N P + K+ LDLS N V VN
Sbjct: 399 AKQRLAGEENGCISFVDAPALQHLSLADNMLSILPAHTFFKTSLIFLDLSMNPGLTVEVN 458
Query: 458 FLQTFADSLRKLYLDFNEIKHL--DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
L SL L+L N + L D F +L L+L N ++ + K G P L+
Sbjct: 459 ALSGLEQSLEYLHLHGNSLIELNIDLPCFSHL---RHLNLSENQLSWLPKWGS-GSP-LE 513
Query: 516 IIDLSFNEISML 527
++DL N S L
Sbjct: 514 VLDLRNNRFSTL 525
Score = 199 (75.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 86/308 (27%), Positives = 143/308 (46%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
TL L+ N ++ +I S +NL L ++L N I H + LK + LS N
Sbjct: 161 TLLNLSRLNLSMNSITCISDFNLRQLEILDLSRNSIESFHTT--ESDDEYSLKCLDLSEN 218
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS--FNQI--KYIYPN 381
+L+ F + +L T+ LS NL++ +S +N M N L F+ + K
Sbjct: 219 --KLLRFPVFPQVNKLVTLNLSKNLIQLTAESSRNKMNYMENEWLDAPFHLLDQKQSRNK 276
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
+ +NL +L LDL N++K F ++ S T LNLS N + +E + +
Sbjct: 277 SSLNLSHLAYLDLSYNEIKSIPDEFFESMFSLHT---LNLSKNCLQT-FEVTSDSTLVSL 332
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
LDLS N +Q + ++ T + L++LY+ N ++ L F L L L+L+ NNI
Sbjct: 333 TVLDLSYNALQSLLLH-ADTLLN-LKELYIQNNHLQVLQFDIFSRLTSLRWLNLQSNNIT 390
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTII 561
+ + G+ + L+ E ++ F + L+ L+++ N L LP F T +
Sbjct: 391 LC--SMYSGLAKQR---LAGEENGCIS---FVDAPALQHLSLADNMLSILPAHTFFKTSL 442
Query: 562 EKLDISYN 569
LD+S N
Sbjct: 443 IFLDLSMN 450
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 94/387 (24%), Positives = 179/387 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFN-----------KLQIIELNSNVFDVFEKLQLLEIS 246
N I ++ F L NL L+LS N +L+I++L+ N + F + +
Sbjct: 149 NIIMEIEEGAFETLLNLSRLNLSMNSITCISDFNLRQLEILDLSRNSIESFHTTES-DDE 207
Query: 247 FSL----FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN--YINLEYNK 300
+SL + N+ + + +N L L + N I+ S + + +++ ++
Sbjct: 208 YSLKCLDLSENKLLRFPVFPQVNKLVTLNLSKNLIQLTAESSRNKMNYMENEWLDAPFHL 267
Query: 301 IS-KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSF 359
+ K N N+ L + LS N ++ I + F ++ L+T+ LS N L++ + TS
Sbjct: 268 LDQKQSRNKSSLNL-SHLAYLDLSYNEIKSIPDEFFESMFSLHTLNLSKNCLQTFEVTSD 326
Query: 360 KNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL 419
L ++ + LS+N ++ + +A L NL +L +Q+N L+ ++FS +TS + +NL
Sbjct: 327 STLVSLTVLDLSYNALQSLLLHADTLL-NLKELYIQNNHLQVLQFDIFSRLTSLRW-LNL 384
Query: 420 NLSNNYITNLYENDKKQ--------------APIYIKSLDLSNNRIQEVPVNFLQTFADS 465
+N + ++Y KQ AP ++ L L++N + +P + F S
Sbjct: 385 QSNNITLCSMYSGLAKQRLAGEENGCISFVDAPA-LQHLSLADNMLSILPAHTF--FKTS 441
Query: 466 LRKLYLDFNEIKHLDATAFGNLDV-LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
L L L N ++ A L+ LE L L H N + + +L+ ++LS N++
Sbjct: 442 LIFLDLSMNPGLTVEVNALSGLEQSLEYLHL-HGNSLIELNIDLPCFSHLRHLNLSENQL 500
Query: 525 SMLTGEQFYFSFKLRILNISHNRLRSL 551
S L ++ L +L++ +NR +L
Sbjct: 501 SWLP--KWGSGSPLEVLDLRNNRFSTL 525
Score = 186 (70.5 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 88/316 (27%), Positives = 148/316 (46%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI-HNNLFHFNIHKRLKEIRLSN 324
+L+ L + +N I I ++TSL INL N + ++ +++ + LS+
Sbjct: 40 SLQCLDLSSNQISFITPGVFAHMTSLLEINLANNNLYELAQTGTEGIGFLPKVEILDLSH 99
Query: 325 NYLELIESDTFYN-LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N L ++ F L ++L+ N + I F+ N++ I L N I I AF
Sbjct: 100 NSLYNGMAEYFIKRAPALRYLSLAGNSIIMISHKMFQGSPNLVEIDLQSNIIMEIEEGAF 159
Query: 384 VNLPNLVKLDLQDNKL---KDFNLNVFSNITSKQTPMNLNLSNNYITNLY--ENDKKQAP 438
L NL +L+L N + DFNL +Q + L+LS N I + + E+D + +
Sbjct: 160 ETLLNLSRLNLSMNSITCISDFNL--------RQLEI-LDLSRNSIESFHTTESDDEYS- 209
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+K LDLS N++ PV F Q + L L L N I+ ++ ++ +E L+
Sbjct: 210 --LKCLDLSENKLLRFPV-FPQV--NKLVTLNLSKNLIQLTAESSRNKMNYMENEWLDAP 264
Query: 499 NIAVVVK----RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
+ K ++ + + +L +DLS+NEI + E F F L LN+S N L++
Sbjct: 265 FHLLDQKQSRNKSSLNLSHLAYLDLSYNEIKSIPDEFFESMFSLHTLNLSKNCLQTFEVT 324
Query: 555 VFSNTI-IEKLDISYN 569
S + + LD+SYN
Sbjct: 325 SDSTLVSLTVLDLSYN 340
Score = 176 (67.0 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 64/230 (27%), Positives = 112/230 (48%)
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
+N I LS NL++SI ++ + LS NQI +I P F ++ +L++++L +N L
Sbjct: 17 VNKIDLSGNLIQSIPDMPLPFYTSLQCLDLSSNQISFITPGVFAHMTSLLEINLANNNLY 76
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITN-LYENDKKQAPIYIKSLDLSNNRIQEVPVNFL 459
+ I L+LS+N + N + E K+AP ++ L L+ N I +
Sbjct: 77 ELAQTGTEGIGFLPKVEILDLSHNSLYNGMAEYFIKRAPA-LRYLSLAGNSIIMISHKMF 135
Query: 460 QTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
Q + +L ++ L N I ++ AF L L L+L N+I + + + L+I+DL
Sbjct: 136 QG-SPNLVEIDLQSNIIMEIEEGAFETLLNLSRLNLSMNSITCI---SDFNLRQLEILDL 191
Query: 520 SFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
S N I + + L+ L++S N+L P N ++ L++S N
Sbjct: 192 SRNSIESFHTTESDDEYSLKCLDLSENKLLRFPVFPQVNKLVT-LNLSKN 240
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 106/436 (24%), Positives = 190/436 (43%)
Query: 3 LDLSHNKLSVLNMATLY-SNVTKLQHL---GTTIL--KGDQLQGIFNSKLRELEITGKDL 56
LDLSHN L MA + L++L G +I+ QG N L E+++ +
Sbjct: 95 LDLSHNSL-YNGMAEYFIKRAPALRYLSLAGNSIIMISHKMFQGSPN--LVEIDLQSNII 151
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMAT 115
I+ AF+ + L L N + + + D N+ Q+ LDLS N + + T
Sbjct: 152 MEIEEGAFETL-----LNLSRLNLSMNSITC-ISDF--NLRQLEILDLSRNSIESFH-TT 202
Query: 116 LYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNN 175
+ L+ L D + + NK+ LN L ++L + ++ +N N
Sbjct: 203 ESDDEYSLKCL------DLSENKLLRFPVFPQVNKLVTLN--LSKNLIQLTAESSRNKMN 254
Query: 176 ---NE---------DQVSDREKXXXXXXXXXX---RCNKITDLNGNLFRHLYNLQELSLS 220
NE DQ R K N+I + F +++L L+LS
Sbjct: 255 YMENEWLDAPFHLLDQKQSRNKSSLNLSHLAYLDLSYNEIKSIPDEFFESMFSLHTLNLS 314
Query: 221 FNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKN-LNTLEWLAMDNNNIKN 279
N LQ E+ S+ L +L++S++ S +L+ + L L+ L + NN+++
Sbjct: 315 KNCLQTFEVTSD--STLVSLTVLDLSYNALQS-----LLLHADTLLNLKELYIQNNHLQ- 366
Query: 280 IRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
+ + +++ LTSL ++NL+ N I+ +++ L + RL+ I +F +
Sbjct: 367 VLQFDIFSRLTSLRWLNLQSNNITLC-------SMYSGLAKQRLAGEENGCI---SFVDA 416
Query: 339 KELNTITLSYNLLKSIKT-TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP-NLVKLDLQD 396
L ++L+ N+L + T FK +++ + LS N + NA L +L L L
Sbjct: 417 PALQHLSLADNMLSILPAHTFFKT--SLIFLDLSMNPGLTVEVNALSGLEQSLEYLHLHG 474
Query: 397 NKLKDFNLNV--FSNI 410
N L + N+++ FS++
Sbjct: 475 NSLIELNIDLPCFSHL 490
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 97/455 (21%), Positives = 199/455 (43%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDL-S 104
LR L + G + I F ++ L+ +N I E+ G F+ + N+ ++ L + S
Sbjct: 117 LRYLSLAGNSIIMISHKMFQGSPNLVEIDLQ-SNI-IMEIEEGAFETLLNLSRLNLSMNS 174
Query: 105 HNKLSVLNMATL-YSNVTK--LQHLGTTILKDRE--KXXXXXXXXXXRCNKITDLNGNLF 159
+S N+ L ++++ ++ TT D K R +N +
Sbjct: 175 ITCISDFNLRQLEILDLSRNSIESFHTTESDDEYSLKCLDLSENKLLRFPVFPQVNKLVT 234
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKI-TDLNGNLFRHLYNLQELS 218
+L K++++ ++ N+ + E + ++ + LN L +L L
Sbjct: 235 LNLSKNLIQLTAESSRNKMNYMENEWLDAPFHLLDQKQSRNKSSLN------LSHLAYLD 288
Query: 219 LSFNKLQII--ELNSNVFDVFEKLQLLEISFSLF----NSNEFPYYILNKNLNTLEWLAM 272
LS+N+++ I E ++F + L L + F +S +L+ + N L+ L +
Sbjct: 289 LSYNEIKSIPDEFFESMFSL-HTLNLSKNCLQTFEVTSDSTLVSLTVLDLSYNALQSLLL 347
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLE-YNKISKIH------NNLFHFNIHKRLKEIRLSNN 325
+ + N++ + N L + + +++++ + NN+ +++ L + RL+
Sbjct: 348 HADTLLNLKELYIQN-NHLQVLQFDIFSRLTSLRWLNLQSNNITLCSMYSGLAKQRLAGE 406
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKT-TSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
I +F + L ++L+ N+L + T FK +++ + LS N + NA
Sbjct: 407 ENGCI---SFVDAPALQHLSLADNMLSILPAHTFFKT--SLIFLDLSMNPGLTVEVNALS 461
Query: 385 NLP-NLVKLDLQDNKLKDFNLNV--FSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
L +L L L N L + N+++ FS++ +LNLS N ++ L + +P+ +
Sbjct: 462 GLEQSLEYLHLHGNSLIELNIDLPCFSHLR------HLNLSENQLSWLPKWGSG-SPLEV 514
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
LDL NNR + + + +SL+ LYL N +
Sbjct: 515 --LDLRNNRFSTLQNSNILALENSLKNLYLTGNPL 547
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 240 (89.5 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 105/395 (26%), Positives = 179/395 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T + F L++L+ L L N+L+ ++ LQ L + ++N Y
Sbjct: 100 NALTHIPKGAFAGLHSLKVLMLQNNQLR--QVPEEALQNLRSLQSLRL-----DANHISY 152
Query: 258 YILN--KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L++L L +D+N + ++ + +L++L + L NKI I ++ F N+
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFG-NLSS 211
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L + L NN + + F L L T+ L+YN L T + K L+N+ + N I
Sbjct: 212 -LVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNI 269
Query: 376 KYIYPNAFVNLPNLVKLDLQDN--------------KLKDFNLN------VFSNITSKQT 415
+ I AFV P+L+ + DN +L+ LN F ++T T
Sbjct: 270 RSIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGASQITEFPDLTGTAT 329
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
+L L+ I++L + Q P ++ LDLS N ++++P + L+K+ L NE
Sbjct: 330 LESLTLTGAKISSLPQTVCDQLP-NLQVLDLSYNLLEDLPS---LSGCQKLQKIDLRHNE 385
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
I + F L L L+L N IA++ F +P+L +DLS N +S +
Sbjct: 386 IYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTGLH-- 443
Query: 536 FKLRILNISHNR-LRSL-PRDVFSNTIIEKLDISY 568
L L ++ NR L+SL P F I ++ +Y
Sbjct: 444 -GLTHLKLTGNRALQSLIPSANFPELKIIEMPYAY 477
Score = 237 (88.5 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 78/277 (28%), Positives = 131/277 (47%)
Query: 292 NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+Y++L N IS++ +L H + + L+E+RL+ N L I F L L + L N L
Sbjct: 69 SYLDLSMNNISQLPASLLH-RL-RFLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQL 126
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
+ + + +NL ++ ++ L N I Y+ P+ F L +L L L DN L D + F +++
Sbjct: 127 RQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLS 186
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
+ Q M L L N I ++ ++ + L L NNRI + SL L L
Sbjct: 187 ALQA-MTLAL--NKIHHIADHAFGNLSSLVV-LHLHNNRIHSLGKKCFDGL-HSLETLDL 241
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
++N + TA L L+ L NNI + +R F+G P+L I N I +
Sbjct: 242 NYNNLDEFP-TAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGISA 300
Query: 532 FYFSFKLRILNISH-NRLRSLPRDVFSNTIIEKLDIS 567
F +LR L ++ +++ P D+ +E L ++
Sbjct: 301 FQHLPELRTLTLNGASQITEFP-DLTGTATLESLTLT 336
Score = 198 (74.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 100/412 (24%), Positives = 172/412 (41%)
Query: 11 SVLNMATLYSNVTKL-QHLGTTILKGDQLQGIFNSKLR---ELEITGKDLKFIDPSAFDN 66
S L ++ L SN++ +L ++ QL +LR EL + G L I AF
Sbjct: 53 SDLGLSELPSNLSVFTSYLDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAG 112
Query: 67 IDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ + L L+ N Q+ ++P + +++ + LD +H +S + + +S + L+HL
Sbjct: 113 LHSLKVLMLQ--NNQLRQVPEEALQNLRSLQSLRLDANH--ISYVP-PSCFSGLHSLRHL 167
Query: 127 G------TTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQV 180
T + + NKI + + F +L S+V +NN
Sbjct: 168 WLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLS-SLVVLHLHNNRIHSLG 226
Query: 181 SDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKL 240
N + + + L NL+EL N ++ I + V +
Sbjct: 227 KKCFDGLHSLETLDLNYNNLDEFP-TAIKTLSNLKELGFHSNNIRSIPERAFVGNP---- 281
Query: 241 QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNY-SLYNLTSLNYINLEYN 299
L+ I F N +F ++L L L + N I + L +L + L
Sbjct: 282 SLITIHF-YDNPIQFVGISAFQHLPELRTLTL--NGASQITEFPDLTGTATLESLTLTGA 338
Query: 300 KISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSF 359
KIS + + + L+ + LS N LE + S ++L I L +N + IK +F
Sbjct: 339 KISSLPQTVC--DQLPNLQVLDLSYNLLEDLPS--LSGCQKLQKIDLRHNEIYEIKGGTF 394
Query: 360 KNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
+ L N+ ++ L+ N+I I+PNAF LP+L+KLDL N L F + +T
Sbjct: 395 QQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTGLHGLT 446
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 54/205 (26%), Positives = 90/205 (43%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
LS N I + + L L +L L N L F+ + S + M L NN + +
Sbjct: 73 LSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLHSLKVLM---LQNNQLRQV 129
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
E + Q ++SL L N I VP + SLR L+LD N + + AF +L
Sbjct: 130 PE-EALQNLRSLQSLRLDANHISYVPPSCFSGL-HSLRHLWLDDNALTDVPVQAFRSLSA 187
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ ++L N I + F + +L ++ L N I L + F L L++++N L
Sbjct: 188 LQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLD 247
Query: 550 SLPRDVFSNTIIEKLDISYNQDKIR 574
P + T+ ++ ++ + IR
Sbjct: 248 EFPTAI--KTLSNLKELGFHSNNIR 270
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 37/133 (27%), Positives = 64/133 (48%)
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
++ LDLS N I ++P + L L +L L N + H+ AF L L++L L++N
Sbjct: 66 VFTSYLDLSMNNISQLPASLLHRLR-FLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNN 124
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF-S 557
+ V + + +LQ + L N IS + F LR L + N L +P F S
Sbjct: 125 QLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRS 184
Query: 558 NTIIEKLDISYNQ 570
+ ++ + ++ N+
Sbjct: 185 LSALQAMTLALNK 197
Score = 42 (19.8 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
C DL L + + S L + NI Q+ L H +L L L N L H+
Sbjct: 52 CSDLGLSELPSNLSVFTSYLDLSMNNISQLPASLLH-RLRFLEELRLAGNA--LTHI 105
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 238 (88.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 100/361 (27%), Positives = 166/361 (45%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLL-EISFSLFNSNEFPYYI-LNKNLNTLEWLAMDN 274
L LS N+L I+ +S LQ L E+ N+NE L + L++
Sbjct: 79 LDLSHNRLSFIKASS-----MSHLQSLREVKL---NNNELETIPNLGPVSANITLLSLAG 130
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N I I L SL ++L N IS++ +LK + L++N + +E
Sbjct: 131 NRIVEILPEHLKEFQSLETLDLSSNNISELQTAFPAL----QLKYLYLNSNRVTSMEPGY 186
Query: 335 FYNLKE-LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
F NL L + L+ N + +I FK L + ++ L+ N+IK + F L L L
Sbjct: 187 FDNLANTLLVLKLNRNRISAIPPKMFK-LPQLQHLELNRNKIKNVDGLTFQGLGALKSLK 245
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE 453
+Q N + F +++ + L L +N +T + + + ++ L LS N I
Sbjct: 246 MQRNGVTKLMDGAFWGLSNMEI---LQLDHNNLTEITKG-WLYGLLMLQELHLSQNAINR 301
Query: 454 VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
+ + + F L +L L FN + LD ++F L +L L + +N ++ + F G+ +
Sbjct: 302 ISPDAWE-FCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSS 360
Query: 514 LQIIDLSFNEISMLTGEQFYFSF----KLRILNISHNRLRSLPRDVFSNT-IIEKLDISY 568
L+ +DL NEIS T E +F KLR L + NR+RS+ + F+ +E LD+S
Sbjct: 361 LKTLDLKNNEISW-TIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSD 419
Query: 569 N 569
N
Sbjct: 420 N 420
Score = 222 (83.2 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 93/375 (24%), Positives = 174/375 (46%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N+ LSL+ N+ I+E+ F+ L+ L++S + + + + L L++L +
Sbjct: 122 NITLLSLAGNR--IVEILPEHLKEFQSLETLDLSSNNISELQTAFPALQ-----LKYLYL 174
Query: 273 DNNNIKNIRNYSLYNLTS-LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
++N + ++ NL + L + L N+IS I +F +L+ + L+ N ++ ++
Sbjct: 175 NSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFKL---PQLQHLELNRNKIKNVD 231
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
TF L L ++ + N + + +F L+NM + L N + I L L +
Sbjct: 232 GLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQE 291
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI 451
L L N + + + + Q L+L+ N+++ L ++ + + +L + NNR+
Sbjct: 292 LHLSQNAINRISPDAWEFC---QKLSELDLTFNHLSRLDDSSFLGLSL-LNTLHIGNNRV 347
Query: 452 QEVPVNFLQTFADSLRKLYLDFNEIKHL--DAT-AFGNLDVLELLSLEHNNIAVVVKRTF 508
+ + + SL+ L L NEI D AF LD L L L+ N I + K+ F
Sbjct: 348 SYIADCAFRGLS-SLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAF 406
Query: 509 IGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN------RLRSLPRDVFSNTIIE 562
G+ L+ +DLS N I L G F KL+ L+++ + +L+ LP+ V N
Sbjct: 407 TGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLLCDCQLKWLPQWVAENNFQS 466
Query: 563 KLDISYNQDKIRPGR 577
++ S ++ GR
Sbjct: 467 FVNASCAHPQLLKGR 481
Score = 203 (76.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 90/389 (23%), Positives = 178/389 (45%)
Query: 101 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGN--- 157
LDLSHN+LS + S+++ LQ L L + E + L GN
Sbjct: 79 LDLSHNRLSFIKA----SSMSHLQSLREVKLNNNELETIPNLGPVSANITLLSLAGNRIV 134
Query: 158 --LFRHLQK--SIVKAKKNNNNNEDQVSDREKX--XXXXXXXXXRCNKITDLNGNLFRHL 211
L HL++ S+ ++NN +S+ + N++T + F +L
Sbjct: 135 EILPEHLKEFQSLETLDLSSNN----ISELQTAFPALQLKYLYLNSNRVTSMEPGYFDNL 190
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
N L L N+ +I + +F + +LQ LE++ + + + + + L L+ L
Sbjct: 191 ANTL-LVLKLNRNRISAIPPKMFKL-PQLQHLELNRNKIKNVDGLTF---QGLGALKSLK 245
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
M N + + + + + L+++ + L++N +++I + + L+E+ LS N + I
Sbjct: 246 MQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLL--MLQELHLSQNAINRIS 303
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
D + ++L+ + L++N L + +SF L+ + + + N++ YI AF L +L
Sbjct: 304 PDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKT 363
Query: 392 LDLQDNKL----KDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
LDL++N++ +D N FS + + L L N I ++ + ++ LDLS
Sbjct: 364 LDLKNNEISWTIEDMN-GAFSGLDKLR---RLILQGNRIRSITKKAFTGLDA-LEHLDLS 418
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+N I + N L++L+L+ + +
Sbjct: 419 DNAIMSLQGNAFSQMK-KLQQLHLNTSSL 446
Score = 164 (62.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 88/387 (22%), Positives = 168/387 (43%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFN-----SKLRELEITGKDLK 57
LDLSHN+LS + S+++ LQ L L ++L+ I N + + L + G +
Sbjct: 79 LDLSHNRLSFIKA----SSMSHLQSLREVKLNNNELETIPNLGPVSANITLLSLAGNRIV 134
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL------ 111
I P + TL +++ I EL + ++ L L+ N+++ +
Sbjct: 135 EILPEHLKEFQSLE--TLDLSSNNISELQTAF----PALQLKYLYLNSNRVTSMEPGYFD 188
Query: 112 NMA-TLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAK 170
N+A TL V KL + + + NKI +++G F+ L +K+
Sbjct: 189 NLANTLL--VLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGL--GALKSL 244
Query: 171 KNNNNNEDQVSDREK-XXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIEL 229
K N ++ D N +T++ L LQEL LS N + +
Sbjct: 245 KMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAIN--RI 302
Query: 230 NSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLT 289
+ + ++ +KL L+++F+ + + ++ LNTL + NN + I + + L+
Sbjct: 303 SPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLH---IGNNRVSYIADCAFRGLS 359
Query: 290 SLNYINLEYNKIS-KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
SL ++L+ N+IS I + F+ +L+ + L N + I F L L + LS
Sbjct: 360 SLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSD 419
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQI 375
N + S++ +F + + + L+ + +
Sbjct: 420 NAIMSLQGNAFSQMKKLQQLHLNTSSL 446
Score = 124 (48.7 bits), Expect = 0.00060, P = 0.00060
Identities = 37/136 (27%), Positives = 72/136 (52%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P ++ LDLS+NR+ + + + + SLR++ L+ NE++ + + ++ LLSL
Sbjct: 73 PSWVARLDLSHNRLSFIKASSM-SHLQSLREVKLNNNELETIPNLGPVSANIT-LLSLAG 130
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I ++ +L+ +DLS N IS L + + + +L+ L ++ NR+ S+ F
Sbjct: 131 NRIVEILPEHLKEFQSLETLDLSSNNISEL--QTAFPALQLKYLYLNSNRVTSMEPGYFD 188
Query: 558 NTIIEKLDISYNQDKI 573
N L + N+++I
Sbjct: 189 NLANTLLVLKLNRNRI 204
Score = 41 (19.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 407 FSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV----NFLQTF 462
FSNI+ L L+ +Y N K + SLD S N + V +F+ TF
Sbjct: 985 FSNISWPSHVRKL-LNTSYSHNEGPGMKNLC-LNKSSLDFSANP-EPASVASSNSFMGTF 1041
Query: 463 ADSLRKLYLD 472
+LR+ +LD
Sbjct: 1042 GKALRRPHLD 1051
>FB|FBgn0260793 [details] [associations]
symbol:2mit species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014297 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 RefSeq:NP_650258.2 UniGene:Dm.29781
ProteinModelPortal:Q9VFY9 SMR:Q9VFY9 IntAct:Q9VFY9 MINT:MINT-879044
EnsemblMetazoa:FBtr0301436 GeneID:41616 KEGG:dme:Dmel_CG42573
UCSC:CG17319-RA CTD:41616 FlyBase:FBgn0260793 eggNOG:NOG150682
InParanoid:Q9VFY9 OMA:TRREAPY GenomeRNAi:41616 NextBio:824659
Bgee:Q9VFY9 Uniprot:Q9VFY9
Length = 1141
Score = 238 (88.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 98/350 (28%), Positives = 166/350 (47%)
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFE---KLQLLEISFSLFNSNEFPYYILNKNLN 265
RH L EL+ NKL + + F+ K I+ +SN+ L+ N N
Sbjct: 85 RHKREL-ELNAPANKLNLTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLD-NFN 142
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLT-SLNYINLEY--NKISKIHNNLFHFNIHKRLKEIRL 322
L L + NN+++ I SL + SL ++ L+ NK S+I + F + +LK + L
Sbjct: 143 QLRQLDLGNNSLEVIP-LSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRL-PQLKNLNL 200
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
++N L I ++FYNL EL T+ LS+N + I +F L N+ + LS N++ A
Sbjct: 201 AHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNRLSGSAIRA 260
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
+P+LV L + N D + + + L+ S T L + A ++
Sbjct: 261 LQGIPDLVSLSIAYNP--DVGV-AMQEFVASWSLKELDASG---TGLCQVPAALAQS-VR 313
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+L LS+N ++ + + ++ L+ L L + I ++ A G L++LE L L+ N +
Sbjct: 314 TLKLSDNWLKAINCGDMDSYP-LLQYLDLSHSRIAQVEDDALGRLELLESLFLDRNLLMR 372
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
V P+L+ + L N+I L + F L+ L++S+NRL LP
Sbjct: 373 VPSSL---PPSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNNRLIFLP 419
Score = 221 (82.9 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 82/302 (27%), Positives = 138/302 (45%)
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
AMD ++ + + SL N L ++L N + I +L N+ + LS N I
Sbjct: 125 AMDLSS-NQLESLSLDNFNQLRQLDLGNNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQI 183
Query: 331 ESDTF-YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F L +L + L++N L +I SF NL + +VLS N I I F+ LPNL
Sbjct: 184 STSFFAQRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNL 243
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
LDL N+L + I ++L+++ N + + A +K LD S
Sbjct: 244 QYLDLSHNRLSGSAIRALQGIPDL---VSLSIAYNPDVGVAMQEFV-ASWSLKELDASGT 299
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+ +VP A S+R L L N +K ++ + +L+ L L H+ IA V + +
Sbjct: 300 GLCQVPA----ALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQV-EDDAL 354
Query: 510 GMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISY 568
G L++++ F + ++L L L + HN++ LP F + ++ LD+S
Sbjct: 355 G--RLELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSN 412
Query: 569 NQ 570
N+
Sbjct: 413 NR 414
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 166 (63.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 274 NNNIKNIRNYSLYNL-TSL----NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + T+L I LE N I I F + +K+L+ I LSNN +
Sbjct: 282 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAF--SPYKKLRRIDLSNNQIS 339
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ D F L+ LN++ L N + + + F+ L ++ ++L+ N+I + +AF +L N
Sbjct: 340 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 399
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
L L L DNKL+ FS + + QT M+L N +I + +
Sbjct: 400 LNLLSLYDNKLQTIAKGTFSPLRAIQT-MHL-AQNPFICDCH 439
Score = 158 (60.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 47/161 (29%), Positives = 80/161 (49%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
NT E L ++ NNI I L L + L NKI+ I F ++ K L+ +RL+
Sbjct: 56 NT-ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQ-DL-KELERLRLNR 112
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N+L+L F +L + LS N +++I +F+ ++ N+ L +N I I AF
Sbjct: 113 NHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFR 172
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
L +L L L +N + ++ F+++ +T L+ +N Y
Sbjct: 173 ALRDLEVLTLNNNNITRLSVASFNHMPKLRT-FRLHSNNLY 212
Score = 149 (57.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 360 KNL-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
+N+ N + L+ N I I F L +L L L +NK+ F ++ +
Sbjct: 51 RNIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELE---R 107
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L L+ N++ L+ + LDLS N+IQ +P + D ++ L LD+N I
Sbjct: 108 LRLNRNHL-QLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVD-IKNLQLDYNHISC 165
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ AF L LE+L+L +NNI + +F MP L+ L N +
Sbjct: 166 IEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 146 (56.5 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 86/343 (25%), Positives = 148/343 (43%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N+ ++E +F+KL QL +I+FS + + + + + + +
Sbjct: 539 ELRLNNNEFTVLEATG----IFKKLPQLRKINFSNNKITDIEEGAF-EGASGVNEILLTS 593
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N ++N+++ L SL + L N+IS + N+ F RL + L +N + I
Sbjct: 594 NRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRL--LSLYDNQITTIAPGA 651
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP-NAFVNLPNLVK-L 392
F L L+T+ NLL + F N N L + + + K I N P +K +
Sbjct: 652 FDTLHSLSTL----NLLAN----PF-NCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEI 702
Query: 393 DLQDNKLKDFNLNVFSNITS----KQTPMNLNLSNNYITNLYENDK---KQAPIYIKSLD 445
+QD ++DF + ++ S + P + + + K K P + L
Sbjct: 703 PIQDVAIQDFTCDDGNDDNSCSPLSRCPAECTCLDTVVRCSNKALKVLPKGIPRDVTELY 762
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L + L + L N I L +F N+ L L L +N + +
Sbjct: 763 LDGNQFTLVPKE-LSNYKH-LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 820
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
RTF G+ +L+++ L N+IS++ F L L I N L
Sbjct: 821 RTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPL 863
Score = 136 (52.9 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 297 EYNKISKIHNNLFHF----NIHKRLKEIR---LSNNYLELIESDTFYNLKELNTITLSYN 349
+Y +++NN F I K+L ++R SNN + IE F +N I L+ N
Sbjct: 535 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 594
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L++++ FK L ++ ++L N+I + ++F+ L ++ L L DN++ F
Sbjct: 595 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDT 654
Query: 410 ITSKQTPMNLNLSNNYITNLY 430
+ S T +NL L+N + N Y
Sbjct: 655 LHSLST-LNL-LANPFNCNCY 673
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 48/167 (28%), Positives = 80/167 (47%)
Query: 385 NLP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
N+P N +LDL N + F+ + + L L N IT + E Q ++
Sbjct: 52 NIPRNTERLDLNGNNITRITKTDFAGLRHLRV---LQLMENKITTI-ERGAFQDLKELER 107
Query: 444 LDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLEHNNIA 501
L L+ N +Q P + FL T L +L L N+I+ + AF G +D+ L L++N+I+
Sbjct: 108 LRLNRNHLQLFPELLFLGT--SKLYRLDLSENQIQAIPRKAFRGAVDIKNL-QLDYNHIS 164
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
+ F + +L+++ L+ N I+ L+ F KLR + N L
Sbjct: 165 CIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 128 (50.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 38/133 (28%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P I + L N I+ +P + LR++ L N+I L AF L L L L
Sbjct: 301 PETITEIRLEQNSIKVIPPGAFSPYK-KLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 359
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + K F G+ +LQ++ L+ N+I+ L + F L +L++ N+L+++ + FS
Sbjct: 360 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 419
Query: 558 NT-IIEKLDISYN 569
I+ + ++ N
Sbjct: 420 PLRAIQTMHLAQN 432
Score = 122 (48.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 43/168 (25%), Positives = 81/168 (48%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI + + + L+ N + I F L+ L + L N + +I+ +F++L + + L+
Sbjct: 52 NIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLN 111
Query: 372 FNQIKYIYPNA-FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
N ++ ++P F+ L +LDL +N+++ F + NL L N+I+ +
Sbjct: 112 RNHLQ-LFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIK---NLQLDYNHISCI- 166
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPV-NF-----LQTFADSLRKLYLD 472
E+ +A ++ L L+NN I + V +F L+TF LY D
Sbjct: 167 EDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 214
Score = 120 (47.3 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 414 QTPMNLNLSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
Q L L+NN T L K+ P ++ ++ SNN+I ++ + A + ++ L
Sbjct: 535 QYTAELRLNNNEFTVLEATGIFKKLP-QLRKINFSNNKITDIEEGAFEG-ASGVNEILLT 592
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++++ F L+ L+ L L N I+ V +FIG+ +++++ L N+I+ + F
Sbjct: 593 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAF 652
Query: 533 YFSFKLRILNISHN 546
L LN+ N
Sbjct: 653 DTLHSLSTLNLLAN 666
Score = 116 (45.9 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L+ N+ + + L ++ K L I LSNN + + + +F N+ +L T+ LSYN L+ I
Sbjct: 763 LDGNQFTLVPKELSNY---KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 819
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVFSN 409
+F L ++ + L N I + AF +L L L + N L D N+ S+
Sbjct: 820 PRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSD 874
Score = 113 (44.8 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 84/351 (23%), Positives = 140/351 (39%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
K + + +NN + D + NKIT+L +LF L++LQ L L+ NK
Sbjct: 326 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 385
Query: 224 LQIIEL-------NSNVFDVFE-KLQLL-EISFSLFNSNEFPYYILNKNLNT--LEWLAM 272
+ + + N N+ +++ KLQ + + +FS + + + N + L+WLA
Sbjct: 386 INCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLA- 444
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
D + I S TS L +I +I + F + K I + +Y +
Sbjct: 445 DYLHTNPIET-SGARCTSPR--RLANKRIGQIKSKKFRCSA-KEQYFIPGTEDYRSKLSG 500
Query: 333 DTFYNLKELNTITLSYNLL--KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA---FVNLP 387
D F +L + + K T + L N ++ A F LP
Sbjct: 501 DCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLP 560
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
L K++ +NK+ D F + + L++N + N+ K +K+L L
Sbjct: 561 QLRKINFSNNKITDIEEGAFEGASGVN---EILLTSNRLENVQHKMFKGLES-LKTLMLR 616
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+NRI V N S+R L L N+I + AF L L L+L N
Sbjct: 617 SNRISCVG-NDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLAN 666
Score = 103 (41.3 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 35/139 (25%), Positives = 65/139 (46%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
++ SN +T + ++ P Y L L+NN + + LRK+ N+I
Sbjct: 519 VDCSNQKLTKIPDH----IPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD 574
Query: 479 LDATAF-GNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
++ AF G V E+L L N + V + F G+ +L+ + L N IS + + F
Sbjct: 575 IEEGAFEGASGVNEIL-LTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSS 633
Query: 538 LRILNISHNRLRSLPRDVF 556
+R+L++ N++ ++ F
Sbjct: 634 VRLLSLYDNQITTIAPGAF 652
Score = 94 (38.1 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+LYLD N+ L N L L+ L +N I+ + ++F M L + LS+N + +
Sbjct: 760 ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCI 818
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
F LR+L++ N + +P F++ + L I N
Sbjct: 819 PPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGAN 861
Score = 93 (37.8 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 27/69 (39%), Positives = 37/69 (53%)
Query: 488 DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR 547
DV EL L+ N +V K +L +IDLS N IS L+ + F +L L +S+NR
Sbjct: 757 DVTELY-LDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 814
Query: 548 LRSLPRDVF 556
LR +P F
Sbjct: 815 LRCIPPRTF 823
Score = 92 (37.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 46/186 (24%), Positives = 84/186 (45%)
Query: 148 CNKIT-DLNGNLFRHLQKSIVKAKKN---NNNNEDQVSDREKXXXXXXXXXXRC-NKITD 202
C+ T D +G R + ++I + + N NN +++ + NKIT
Sbjct: 34 CSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITT 93
Query: 203 LNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILN 261
+ F+ L L+ L L+ N LQ+ EL +F KL L++S + + P
Sbjct: 94 IERGAFQDLKELERLRLNRNHLQLFPEL---LFLGTSKLYRLDLSENQIQA--IPRKAFR 148
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
++ ++ L +D N+I I + + L L + L N I+++ ++ FN +L+ R
Sbjct: 149 GAVD-IKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNITRL--SVASFNHMPKLRTFR 205
Query: 322 LSNNYL 327
L +N L
Sbjct: 206 LHSNNL 211
Score = 90 (36.7 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 32/136 (23%), Positives = 64/136 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N+IK I + L I+L N+IS++ + F + + L +
Sbjct: 299 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ-GL-RSLNSLV 356
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + ++ +F++L+N+ + L N+++ I
Sbjct: 357 LYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 416
Query: 382 AFVNLPNLVKLDLQDN 397
F L + + L N
Sbjct: 417 TFSPLRAIQTMHLAQN 432
Score = 78 (32.5 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 40 GIFN--SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F+ KLR ++++ + + P AF + + L L +I ELP LF+ + +++
Sbjct: 320 GAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY--GNKITELPKSLFEGLFSLQ 377
Query: 98 QMTLDLSH-NKLSV--------LNMATLYSNVTKLQ 124
+ L+ + N L V LN+ +LY N KLQ
Sbjct: 378 LLLLNANKINCLRVDAFQDLHNLNLLSLYDN--KLQ 411
Score = 54 (24.1 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNSKLRELE---ITGKD 55
LDL+ N ++ + ++ L+HL L +++ +G F L+ELE +
Sbjct: 60 LDLNGNNITRITK----TDFAGLRHLRVLQLMENKITTIERGAFQD-LKELERLRLNRNH 114
Query: 56 LKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L+ F Y L L + QI+ +P F +I+ + LD +H
Sbjct: 115 LQLFPELLFLGTSKLYRLDL--SENQIQAIPRKAFRGAVDIKNLQLDYNH 162
Score = 43 (20.2 bits), Expect = 1.8e-10, Sum P(4) = 1.8e-10
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 149 NKITDLNGNLFR---HLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG 205
NKIT+L +LF LQ ++ A K N D D NK+ +
Sbjct: 360 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD----NKLQTIAK 415
Query: 206 NLFRHLYNLQELSLSFN 222
F L +Q + L+ N
Sbjct: 416 GTFSPLRAIQTMHLAQN 432
>WB|WBGene00011971 [details] [associations]
symbol:lron-9 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040017 "positive regulation of
locomotion" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
InterPro:IPR003591 SMART:SM00369 GO:GO:0040011 GO:GO:0040017
GeneTree:ENSGT00700000104286 EMBL:Z81130 UniGene:Cel.6867
GeneID:172529 KEGG:cel:CELE_T23G11.6 UCSC:T23G11.6c CTD:172529
NextBio:875913 PIR:T25194 RefSeq:NP_001076615.1
ProteinModelPortal:O02329 SMR:O02329 EnsemblMetazoa:T23G11.6a
WormBase:T23G11.6a HOGENOM:HOG000015968 InParanoid:O02329
OMA:CNLQTIP ArrayExpress:O02329 Uniprot:O02329
Length = 653
Score = 234 (87.4 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 89/339 (26%), Positives = 149/339 (43%)
Query: 235 DVFEKLQ--LLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN 292
D F+ L+ L ++ N P + +L LE + NN + ++ N L+
Sbjct: 128 DSFKGLEQTLRNLTIHACNLQTIPPSV--DSLENLETVVFSNNKLDSLGVDQFKNKKQLS 185
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY-NLL 351
Y+++ N I+ I F I +N++ + LK L T+ LS + +
Sbjct: 186 YLDVSGNFITSIEEKAFEPLTSLETLVIG-EHNFINETVVEEIGRLKALKTLDLSRADGI 244
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
T FK + + + LS I + P F L L +LDL+ N +++ F +
Sbjct: 245 FQPPETLFKEIPQIEVLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIENITAYAFDGLE 304
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
S L+L+ N+I+ L E D ++ LDL N I+ +P + + D L+ + L
Sbjct: 305 SLT---RLSLAGNFISKL-EPDVFFGLSSLEELDLGWNEIKTIPTDVFKPLTDKLKTISL 360
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N I L +T G L+ L L +I+ + + P L+ +DLS IS +
Sbjct: 361 RNNPISELPSTGLGMLEKLSLAECGFTSISADQLKDY---PKLEELDLSKCNISNIVENT 417
Query: 532 FYFSF-KLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L+ LN+ N+L+SLP + + IE LD+S N
Sbjct: 418 FENQKDSLKKLNLQKNKLKSLPNLIKNLPAIESLDVSSN 456
Score = 184 (69.8 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 85/341 (24%), Positives = 154/341 (45%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L NL+ + S NKL L + F ++L L++S + S E + + L +LE L
Sbjct: 157 LENLETVVFSNNKLD--SLGVDQFKNKKQLSYLDVSGNFITSIEEKAF---EPLTSLETL 211
Query: 271 AMDNNNIKNIRNYS-LYNLTSLNYINLEY-NKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+ +N N + L +L ++L + I + LF I +++ ++LS +
Sbjct: 212 VIGEHNFINETVVEEIGRLKALKTLDLSRADGIFQPPETLFK-EI-PQIEVLKLSGCSIP 269
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+E F LK+L + L NL+++I +F L ++ + L+ N I + P+ F L +
Sbjct: 270 TLEPGQFATLKKLKELDLRVNLIENITAYAFDGLESLTRLSLAGNFISKLEPDVFFGLSS 329
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L +LDL N++K +VF +T K ++L NN I+ L ++ L L+
Sbjct: 330 LEELDLGWNEIKTIPTDVFKPLTDKLK--TISLRNNPISELPSTGLGM----LEKLSLAE 383
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNL-DVLELLSLEHNNIAVVVKRT 507
+ + L+ + L +L L I ++ F N D L+ L+L+ N + +
Sbjct: 384 CGFTSISADQLKDYP-KLEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKLKSL-PNL 441
Query: 508 FIGMPNLQIIDLSFNEISMLTGE--QFYFSFKLRILNISHN 546
+P ++ +D+S N GE F F + R+ N
Sbjct: 442 IKNLPAIESLDVSSNPYRC-DGELVNFVFGVEDRVKKAEEN 481
Score = 167 (63.8 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 74/303 (24%), Positives = 128/303 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS-FSLFNSNEFP 256
NK+ L + F++ L L +S N + IE F+ L+ L I + N
Sbjct: 168 NKLDSLGVDQFKNKKQLSYLDVSGNFITSIE--EKAFEPLTSLETLVIGEHNFINETVVE 225
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
K L TL+ D I + + + L I + F K+
Sbjct: 226 EIGRLKALKTLDLSRADG--IFQPPETLFKEIPQIEVLKLSGCSIPTLEPG--QFATLKK 281
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
LKE+ L N +E I + F L+ L ++L+ N + ++ F L+++ + L +N+IK
Sbjct: 282 LKELDLRVNLIENITAYAFDGLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIK 341
Query: 377 YIYPNAFVNLPNLVK-LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
I + F L + +K + L++N + + + L+L+ T++ + K
Sbjct: 342 TIPTDVFKPLTDKLKTISLRNNPISELPSTGLGMLEK------LSLAECGFTSISADQLK 395
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
P ++ LDLS I + N + DSL+KL L N++K L NL +E L +
Sbjct: 396 DYP-KLEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKLKSLP-NLIKNLPAIESLDV 453
Query: 496 EHN 498
N
Sbjct: 454 SSN 456
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 71/261 (27%), Positives = 123/261 (47%)
Query: 319 EIRLSNNYLEL-IESDTFYNLKE-LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
EI+ + EL + D+F L++ L +T+ L++I S +L N+ +V S N++
Sbjct: 113 EIKECSGQDELKVGDDSFKGLEQTLRNLTIHACNLQTIPP-SVDSLENLETVVFSNNKLD 171
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI--TNLYENDK 434
+ + F N L LD+ N + F +TS +T + + +N+I T + E +
Sbjct: 172 SLGVDQFKNKKQLSYLDVSGNFITSIEEKAFEPLTSLET-LVIG-EHNFINETVVEEIGR 229
Query: 435 KQAPIYIKSLDLSN-NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELL 493
+A +K+LDLS + I + P + + L L I L+ F L L+ L
Sbjct: 230 LKA---LKTLDLSRADGIFQPPETLFKEIPQ-IEVLKLSGCSIPTLEPGQFATLKKLKEL 285
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L N I + F G+ +L + L+ N IS L + F+ L L++ N ++++P
Sbjct: 286 DLRVNLIENITAYAFDGLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTIPT 345
Query: 554 DVFSNTIIEKLD-ISYNQDKI 573
DVF + +KL IS + I
Sbjct: 346 DVFK-PLTDKLKTISLRNNPI 365
Score = 158 (60.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 79/322 (24%), Positives = 140/322 (43%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
TL L + N++ I S+ +L +L + NK+ + + F K+L + +S N
Sbjct: 136 TLRNLTIHACNLQTIPP-SVDSLENLETVVFSNNKLDSL--GVDQFKNKKQLSYLDVSGN 192
Query: 326 YLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA-F 383
++ IE F L L T+ + +N + L + + LS + P F
Sbjct: 193 FITSIEEKAFEPLTSLETLVIGEHNFINETVVEEIGRLKALKTLDLSRADGIFQPPETLF 252
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
+P + L L + F+ + K+ + +NL N IT Y D ++ +
Sbjct: 253 KEIPQIEVLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIEN-IT-AYAFDGLES---LT 307
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNL-DVLELLSLEHNNIA 501
L L+ N I ++ + + SL +L L +NEIK + F L D L+ +SL +N I+
Sbjct: 308 RLSLAGNFISKLEPDVFFGLS-SLEELDLGWNEIKTIPTDVFKPLTDKLKTISLRNNPIS 366
Query: 502 VVVKRTFIGM-PNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT- 559
+ T +GM L + + F IS +Q KL L++S + ++ + F N
Sbjct: 367 ELPS-TGLGMLEKLSLAECGFTSIS---ADQLKDYPKLEELDLSKCNISNIVENTFENQK 422
Query: 560 -IIEKLDISYNQDKIRPGRESN 580
++KL++ N+ K P N
Sbjct: 423 DSLKKLNLQKNKLKSLPNLIKN 444
Score = 140 (54.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 62/223 (27%), Positives = 106/223 (47%)
Query: 358 SFKNLNNML-NIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTP 416
SFK L L N+ + ++ I P+ +L NL + +NKL ++ F N KQ
Sbjct: 129 SFKGLEQTLRNLTIHACNLQTIPPSVD-SLENLETVVFSNNKLDSLGVDQFKN--KKQLS 185
Query: 417 MNLNLSNNYITNLYENDKKQAPIY-IKSLDLS-NNRIQEVPVNFLQTFADSLRKLYLDFN 474
L++S N+IT++ E K P+ +++L + +N I E V + +L+ L L
Sbjct: 186 Y-LDVSGNFITSIEE--KAFEPLTSLETLVIGEHNFINETVVEEIGRLK-ALKTLDLSRA 241
Query: 475 E-IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
+ I T F + +E+L L +I + F + L+ +DL N I +T F
Sbjct: 242 DGIFQPPETLFKEIPQIEVLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIENITAYAFD 301
Query: 534 FSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQDKIRP 575
L L+++ N + L DVF + +E+LD+ +N+ K P
Sbjct: 302 GLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTIP 344
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 232 (86.7 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 67/235 (28%), Positives = 118/235 (50%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L +N I+++ + F +L + L +N + + D+F L +L + LS N +
Sbjct: 71 LSLRHNFITELERD--QFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFH 128
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ T+F L N+ N+ LSFNQ+ ++P L L L L+ N L+ + +F + S
Sbjct: 129 LPNTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSL 188
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLD 472
+ L+LS N + +L N I ++ L L +N++ ++ +FL+ SL L+L
Sbjct: 189 EF---LDLSTNRLRSLARNGFAGL-IKLRELHLEHNQLTKINFAHFLRL--SSLHTLFLQ 242
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+N+I +L LE L L N+I + F MPNL+ + L N++S L
Sbjct: 243 WNKISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTL 297
Score = 221 (82.9 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 65/254 (25%), Positives = 129/254 (50%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ +N I + + + L +++L++N+I+ + + F ++K LKE+ LS+N +
Sbjct: 71 LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQ-GLYK-LKELVLSSNKIFH 128
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ + TF L L + LS+N L S+ L + + L N ++ I F + +L
Sbjct: 129 LPNTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSL 188
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL-YENDKKQAPIYIKSLDLSN 448
LDL N+L+ N F+ + + L+L +N +T + + + + + ++ +L L
Sbjct: 189 EFLDLSTNRLRSLARNGFAGLIKLR---ELHLEHNQLTKINFAHFLRLSSLH--TLFLQW 243
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
N+I + T+ +L KL L N+IK +D T F + L+ L L++N ++ + +
Sbjct: 244 NKISNLTCGMEWTWG-TLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKIL 302
Query: 509 IGMPNLQIIDLSFN 522
+P+L + LS N
Sbjct: 303 RSLPSLSTVGLSGN 316
Score = 219 (82.2 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 68/236 (28%), Positives = 115/236 (48%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+ + L WL +D+N I +R S L L + L NKI + N F ++ L+ + L
Sbjct: 88 SFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLN--LQNLDL 145
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S N L + + Y L++L T+ L N L++I F + ++ + LS N+++ + N
Sbjct: 146 SFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNG 205
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F L L +L L+ N+L N F ++S T L L N I+NL + ++
Sbjct: 206 FAGLIKLRELHLEHNQLTKINFAHFLRLSSLHT---LFLQWNKISNL-TCGMEWTWGTLE 261
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
LDL+ N I+ + + +T + L+ L LD N++ LD+ +L L + L N
Sbjct: 262 KLDLTGNDIKAIDLTVFETMPN-LKTLLLDNNKLSTLDSKILRSLPSLSTVGLSGN 316
Score = 202 (76.2 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 65/227 (28%), Positives = 110/227 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I + + F+ LY L+EL LS NK I L + F LQ L++SF+ +S P
Sbjct: 100 NQIATVREDSFQGLYKLKELVLSSNK--IFHLPNTTFSQLLNLQNLDLSFNQLSSLH-PE 156
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L L+ L + +N+++ I ++ SL +++L N++ + N F I +L
Sbjct: 157 LLYG--LRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLI--KL 212
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+E+ L +N L I F L L+T+ L +N + ++ + + L+ N IK
Sbjct: 213 RELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNDIKA 272
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
I F +PNL L L +NKL + + ++ S T + LS N
Sbjct: 273 IDLTVFETMPNLKTLLLDNNKLSTLDSKILRSLPSLST---VGLSGN 316
Score = 188 (71.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 60/232 (25%), Positives = 112/232 (48%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L +N++ +E D F + +L + L +N + +++ SF+ L + +VLS N+I ++
Sbjct: 71 LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLP 130
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
F L NL LDL N+L + + + QT L+L +N + +
Sbjct: 131 NTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQT---LHLRSNSLRTIPVRLFWDCRS 187
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ LDLS NR++ + N LR+L+L+ N++ ++ F L L L L+ N
Sbjct: 188 -LEFLDLSTNRLRSLARNGFAGLI-KLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 245
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
I+ + L+ +DL+ N+I + F L+ L + +N+L +L
Sbjct: 246 ISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTL 297
Score = 175 (66.7 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 56/214 (26%), Positives = 106/214 (49%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
++L +N + ++ F + + + + L NQI + ++F L L +L L NK+
Sbjct: 71 LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLP 130
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFA 463
FS + + Q NL+LS N +++L+ + +++L L +N ++ +PV
Sbjct: 131 NTTFSQLLNLQ---NLDLSFNQLSSLHP-ELLYGLRKLQTLHLRSNSLRTIPVRLFWD-C 185
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE 523
SL L L N ++ L F L L L LEHN + + F+ + +L + L +N+
Sbjct: 186 RSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 245
Query: 524 ISMLT-GEQFYFSFKLRILNISHNRLRSLPRDVF 556
IS LT G ++ + L L+++ N ++++ VF
Sbjct: 246 ISNLTCGMEWTWG-TLEKLDLTGNDIKAIDLTVF 278
Score = 170 (64.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 50/161 (31%), Positives = 83/161 (51%)
Query: 411 TSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
T+++ + L+L +N+IT L E D+ + + L L +N+I V + Q L++L
Sbjct: 63 TTEKGSLGLSLRHNFITEL-ERDQFASFSQLTWLHLDHNQIATVREDSFQGLY-KLKELV 120
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
L N+I HL T F L L+ L L N ++ + G+ LQ + L N + +
Sbjct: 121 LSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVR 180
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
F+ L L++S NRLRSL R+ F+ I + +L + +NQ
Sbjct: 181 LFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQ 221
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 53/181 (29%), Positives = 86/181 (47%)
Query: 377 YIYPNAFVNLPNLVK-----LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
Y F ++PN + L L+ N + + + F++ S+ T L+L +N I + E
Sbjct: 51 YCDSQGFHSVPNTTEKGSLGLSLRHNFITELERDQFASF-SQLTW--LHLDHNQIATVRE 107
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
D Q +K L LS+N+I +P F Q +L+ L L FN++ L L L
Sbjct: 108 -DSFQGLYKLKELVLSSNKIFHLPNTTFSQLL--NLQNLDLSFNQLSSLHPELLYGLRKL 164
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
+ L L N++ + R F +L+ +DLS N + L F KLR L++ HN+L
Sbjct: 165 QTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTK 224
Query: 551 L 551
+
Sbjct: 225 I 225
>UNIPROTKB|F1RP64 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 CTD:114798 OMA:NGLPCPG
GeneTree:ENSGT00680000099775 EMBL:CU076063 RefSeq:XP_001927677.3
Ensembl:ENSSSCT00000010400 GeneID:100152470 KEGG:ssc:100152470
Uniprot:F1RP64
Length = 695
Score = 171 (65.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 45/157 (28%), Positives = 81/157 (51%)
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N N+ ++ + L+++ + L NKI I + HF +K L + L NN + +E+
Sbjct: 359 NNRNVSSLADLKP-KLSNVQELFLRDNKIHSIRKS--HFVDYKNLILLDLGNNNIATVEN 415
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
+TF NL +L + + N L ++ F L N+ + + +N I+ I P F +P L L
Sbjct: 416 NTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNAMPKLRIL 475
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L +N L+ ++VF+ ++ + L+L NNY L
Sbjct: 476 ILNNNLLRSLPVDVFAGVSLSK----LSLHNNYFMYL 508
Score = 162 (62.1 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--N 474
+ +N +N +++L D K ++ L L +N+I + + F D + LD N
Sbjct: 354 LKMNCNNRNVSSLA--DLKPKLSNVQELFLRDNKIHSIRKSH---FVDYKNLILLDLGNN 408
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
I ++ F NL L L ++ N + + + F G+ NL+ +++ +N I ++ F
Sbjct: 409 NIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNA 468
Query: 535 SFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
KLRIL +++N LRSLP DVF+ + KL + N
Sbjct: 469 MPKLRILILNNNLLRSLPVDVFAGVSLSKLSLHNN 503
Score = 145 (56.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 197 CNK--ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI---SFSLFN 251
CN ++ L +L L N+QEL L NK+ I S+ D ++ L LL++ + +
Sbjct: 358 CNNRNVSSL-ADLKPKLSNVQELFLRDNKIHSIR-KSHFVD-YKNLILLDLGNNNIATVE 414
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+N F KNL L WL MD+N + + L +L Y+N+EYN I I F
Sbjct: 415 NNTF------KNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTF-- 466
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVL 370
N +L+ + L+NN L + D F + L+ ++L N + L +++ I L
Sbjct: 467 NAMPKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQLTSIIQIDL 525
Query: 371 SFN 373
N
Sbjct: 526 HGN 528
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + + N F +++ L+++ N + + AF L +++ L + +N I
Sbjct: 63 LFLHGNSLTRLFPNEFANFYNAV-SLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSF 121
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
K+TF+G+ +L+ + FN + + F KL +L ++ N + +LP +VF I
Sbjct: 122 RKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVPITH 181
Query: 564 LDISYNQDKIRPGRE 578
LD+ N+ K P E
Sbjct: 182 LDLRGNRLKTLPYEE 196
Score = 123 (48.4 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 40/148 (27%), Positives = 72/148 (48%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N ++++ N F N + + + + NN L I F L+ + + ++ N +K
Sbjct: 62 HLFLHGNSLTRLFPNEFA-NFYNAVS-LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIK 119
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
S + +F L+++ + FN ++ I P AF +L L L L DN + NVF +
Sbjct: 120 SFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYV-- 177
Query: 413 KQTPM-NLNLSNNYITNL-YENDKKQAP 438
P+ +L+L N + L YE +Q P
Sbjct: 178 ---PITHLDLRGNRLKTLPYEEVLEQIP 202
Score = 96 (38.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L M+NN + I + L + +++ NKI F + L+ ++ N L
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTF-LGLDD-LEYLQADFNLLRD 144
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFVNLPN 388
I+ F +L +L + L+ NL+ ++ F+ + + ++ L N++K + Y +P
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 389 LVKLDLQDN 397
+ ++ L+DN
Sbjct: 204 IAEILLEDN 212
Score = 81 (33.6 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 22/91 (24%), Positives = 48/91 (52%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L ++ L ++NN IK+ R + L L Y+ ++N + I F +++K L+ + L+
Sbjct: 105 LQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQ-DLNK-LEVLILN 162
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+N + + ++ F + + + L N LK++
Sbjct: 163 DNLISTLPANVFQYVP-ITHLDLRGNRLKTL 192
Score = 66 (28.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 1 MTLDLSHNKL-SVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKD---L 56
++L + +N L ++ A L + K H+ +K + Q L +LE D L
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLG--LDDLEYLQADFNLL 142
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
+ IDP AF +++ L L + I LP+ +F + LDL N+L L
Sbjct: 143 RDIDPGAFQDLNKLEVLILN--DNLISTLPANVFQYVPITH---LDLRGNRLKTL 192
Score = 58 (25.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T L N F + ++ +NN +E V NKI F
Sbjct: 68 NSLTRLFPNEFANFYNAVSLHMENNGLHEI-VPGAFLGLQLVKRLHINNNKIKSFRKQTF 126
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS---NEFPY 257
L +L+ L FN L+ +++ F KL++L ++ +L ++ N F Y
Sbjct: 127 LGLDDLEYLQADFNLLR--DIDPGAFQDLNKLEVLILNDNLISTLPANVFQY 176
>UNIPROTKB|F1MJJ9 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 CTD:114798 OMA:NGLPCPG
GeneTree:ENSGT00680000099775 EMBL:DAAA02033738 IPI:IPI00709451
RefSeq:XP_002691955.1 RefSeq:XP_003582925.1 RefSeq:XP_003586770.1
RefSeq:XP_872893.3 Ensembl:ENSBTAT00000054494 GeneID:615880
KEGG:bta:615880 NextBio:20899841 Uniprot:F1MJJ9
Length = 696
Score = 171 (65.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 45/157 (28%), Positives = 81/157 (51%)
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N N+ ++ + L+++ + L NKI I + HF +K L + L NN + +E+
Sbjct: 360 NNRNVSSLADLKP-KLSNVQELFLRDNKIHSIRKS--HFVDYKNLILLDLGNNNIATVEN 416
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
+TF NL +L + + N L ++ F L N+ + + +N I+ I P F +P L L
Sbjct: 417 NTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNAMPKLRIL 476
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L +N L+ ++VF+ ++ + L+L NNY L
Sbjct: 477 ILNNNLLRSLPVDVFAGVSLSK----LSLHNNYFMYL 509
Score = 162 (62.1 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--N 474
+ +N +N +++L D K ++ L L +N+I + + F D + LD N
Sbjct: 355 LKMNCNNRNVSSLA--DLKPKLSNVQELFLRDNKIHSIRKSH---FVDYKNLILLDLGNN 409
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
I ++ F NL L L ++ N + + + F G+ NL+ +++ +N I ++ F
Sbjct: 410 NIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNA 469
Query: 535 SFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
KLRIL +++N LRSLP DVF+ + KL + N
Sbjct: 470 MPKLRILILNNNLLRSLPVDVFAGVSLSKLSLHNN 504
Score = 145 (56.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 197 CNK--ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI---SFSLFN 251
CN ++ L +L L N+QEL L NK+ I S+ D ++ L LL++ + +
Sbjct: 359 CNNRNVSSL-ADLKPKLSNVQELFLRDNKIHSIR-KSHFVD-YKNLILLDLGNNNIATVE 415
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+N F KNL L WL MD+N + + L +L Y+N+EYN I I F
Sbjct: 416 NNTF------KNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTF-- 467
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVL 370
N +L+ + L+NN L + D F + L+ ++L N + L +++ I L
Sbjct: 468 NAMPKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQLTSIIQIDL 526
Query: 371 SFN 373
N
Sbjct: 527 HGN 529
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + + N F +++ L+++ N + + AF L +++ L + +N I
Sbjct: 63 LFLHGNSLTRLFPNEFANFYNAV-SLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSF 121
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
K+TF+G+ +L+ + FN + + F KL +L ++ N + +LP +VF I
Sbjct: 122 RKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVPITH 181
Query: 564 LDISYNQDKIRPGRE 578
LD+ N+ K P E
Sbjct: 182 LDLRGNRLKTLPYEE 196
Score = 123 (48.4 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 40/148 (27%), Positives = 72/148 (48%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N ++++ N F N + + + + NN L I F L+ + + ++ N +K
Sbjct: 62 HLFLHGNSLTRLFPNEFA-NFYNAVS-LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIK 119
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
S + +F L+++ + FN ++ I P AF +L L L L DN + NVF +
Sbjct: 120 SFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYV-- 177
Query: 413 KQTPM-NLNLSNNYITNL-YENDKKQAP 438
P+ +L+L N + L YE +Q P
Sbjct: 178 ---PITHLDLRGNRLKTLPYEEVLEQIP 202
Score = 96 (38.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L M+NN + I + L + +++ NKI F + L+ ++ N L
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTF-LGLDD-LEYLQADFNLLRD 144
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFVNLPN 388
I+ F +L +L + L+ NL+ ++ F+ + + ++ L N++K + Y +P
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 389 LVKLDLQDN 397
+ ++ L+DN
Sbjct: 204 IAEILLEDN 212
Score = 81 (33.6 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 22/91 (24%), Positives = 48/91 (52%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L ++ L ++NN IK+ R + L L Y+ ++N + I F +++K L+ + L+
Sbjct: 105 LQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQ-DLNK-LEVLILN 162
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+N + + ++ F + + + L N LK++
Sbjct: 163 DNLISTLPANVFQYVP-ITHLDLRGNRLKTL 192
Score = 66 (28.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 1 MTLDLSHNKL-SVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKD---L 56
++L + +N L ++ A L + K H+ +K + Q L +LE D L
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLG--LDDLEYLQADFNLL 142
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
+ IDP AF +++ L L + I LP+ +F + LDL N+L L
Sbjct: 143 RDIDPGAFQDLNKLEVLILN--DNLISTLPANVFQYVPITH---LDLRGNRLKTL 192
Score = 58 (25.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T L N F + ++ +NN +E V NKI F
Sbjct: 68 NSLTRLFPNEFANFYNAVSLHMENNGLHEI-VPGAFLGLQLVKRLHINNNKIKSFRKQTF 126
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS---NEFPY 257
L +L+ L FN L+ +++ F KL++L ++ +L ++ N F Y
Sbjct: 127 LGLDDLEYLQADFNLLR--DIDPGAFQDLNKLEVLILNDNLISTLPANVFQY 176
>UNIPROTKB|Q96PX8 [details] [associations]
symbol:SLITRK1 "SLIT and NTRK-like protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 MIM:137580 Orphanet:856
EMBL:AB067497 EMBL:AY358289 EMBL:AL355481 EMBL:BC051738
IPI:IPI00102543 RefSeq:NP_443142.1 UniGene:Hs.415478
ProteinModelPortal:Q96PX8 SMR:Q96PX8 STRING:Q96PX8
PhosphoSite:Q96PX8 DMDM:46396997 PaxDb:Q96PX8 PeptideAtlas:Q96PX8
PRIDE:Q96PX8 Ensembl:ENST00000377084 GeneID:114798 KEGG:hsa:114798
UCSC:uc001vlk.3 CTD:114798 GeneCards:GC13M084451 HGNC:HGNC:20297
HPA:HPA012414 MIM:609678 MIM:613229 neXtProt:NX_Q96PX8
PharmGKB:PA134944423 eggNOG:NOG236179 HOGENOM:HOG000290667
HOVERGEN:HBG056407 InParanoid:Q96PX8 OMA:NGLPCPG OrthoDB:EOG428211
PhylomeDB:Q96PX8 GenomeRNAi:114798 NextBio:79234 Bgee:Q96PX8
CleanEx:HS_SLITRK1 Genevestigator:Q96PX8 GermOnline:ENSG00000178235
Uniprot:Q96PX8
Length = 696
Score = 171 (65.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 45/157 (28%), Positives = 81/157 (51%)
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N N+ ++ + L+++ + L NKI I + HF +K L + L NN + +E+
Sbjct: 360 NNRNVSSLADLKP-KLSNVQELFLRDNKIHSIRKS--HFVDYKNLILLDLGNNNIATVEN 416
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
+TF NL +L + + N L ++ F L N+ + + +N I+ I P F +P L L
Sbjct: 417 NTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNAMPKLRIL 476
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L +N L+ ++VF+ ++ + L+L NNY L
Sbjct: 477 ILNNNLLRSLPVDVFAGVSLSK----LSLHNNYFMYL 509
Score = 162 (62.1 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--N 474
+ +N +N +++L D K ++ L L +N+I + + F D + LD N
Sbjct: 355 LKMNCNNRNVSSLA--DLKPKLSNVQELFLRDNKIHSIRKSH---FVDYKNLILLDLGNN 409
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
I ++ F NL L L ++ N + + + F G+ NL+ +++ +N I ++ F
Sbjct: 410 NIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTFNA 469
Query: 535 SFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
KLRIL +++N LRSLP DVF+ + KL + N
Sbjct: 470 MPKLRILILNNNLLRSLPVDVFAGVSLSKLSLHNN 504
Score = 145 (56.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 54/183 (29%), Positives = 86/183 (46%)
Query: 197 CNK--ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI---SFSLFN 251
CN ++ L +L L N+QEL L NK+ I S+ D ++ L LL++ + +
Sbjct: 359 CNNRNVSSL-ADLKPKLSNVQELFLRDNKIHSIR-KSHFVD-YKNLILLDLGNNNIATVE 415
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+N F KNL L WL MD+N + + L +L Y+N+EYN I I F
Sbjct: 416 NNTF------KNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNAIQLILPGTF-- 467
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVL 370
N +L+ + L+NN L + D F + L+ ++L N + L +++ I L
Sbjct: 468 NAMPKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQLTSIIQIDL 526
Query: 371 SFN 373
N
Sbjct: 527 HGN 529
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + + N F +++ L+++ N + + AF L +++ L + +N I
Sbjct: 63 LFLHGNSLTRLFPNEFANFYNAV-SLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSF 121
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
K+TF+G+ +L+ + FN + + F KL +L ++ N + +LP +VF I
Sbjct: 122 RKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVPITH 181
Query: 564 LDISYNQDKIRPGRE 578
LD+ N+ K P E
Sbjct: 182 LDLRGNRLKTLPYEE 196
Score = 123 (48.4 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 40/148 (27%), Positives = 72/148 (48%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N ++++ N F N + + + + NN L I F L+ + + ++ N +K
Sbjct: 62 HLFLHGNSLTRLFPNEFA-NFYNAVS-LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIK 119
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
S + +F L+++ + FN ++ I P AF +L L L L DN + NVF +
Sbjct: 120 SFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYV-- 177
Query: 413 KQTPM-NLNLSNNYITNL-YENDKKQAP 438
P+ +L+L N + L YE +Q P
Sbjct: 178 ---PITHLDLRGNRLKTLPYEEVLEQIP 202
Score = 96 (38.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L M+NN + I + L + +++ NKI F + L+ ++ N L
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTF-LGLDD-LEYLQADFNLLRD 144
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI-YPNAFVNLPN 388
I+ F +L +L + L+ NL+ ++ F+ + + ++ L N++K + Y +P
Sbjct: 145 IDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPG 203
Query: 389 LVKLDLQDN 397
+ ++ L+DN
Sbjct: 204 IAEILLEDN 212
Score = 81 (33.6 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 22/91 (24%), Positives = 48/91 (52%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L ++ L ++NN IK+ R + L L Y+ ++N + I F +++K L+ + L+
Sbjct: 105 LQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQ-DLNK-LEVLILN 162
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+N + + ++ F + + + L N LK++
Sbjct: 163 DNLISTLPANVFQYVP-ITHLDLRGNRLKTL 192
Score = 66 (28.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 1 MTLDLSHNKL-SVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKD---L 56
++L + +N L ++ A L + K H+ +K + Q L +LE D L
Sbjct: 85 VSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLG--LDDLEYLQADFNLL 142
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
+ IDP AF +++ L L + I LP+ +F + LDL N+L L
Sbjct: 143 RDIDPGAFQDLNKLEVLILN--DNLISTLPANVFQYVPITH---LDLRGNRLKTL 192
Score = 58 (25.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N +T L N F + ++ +NN +E V NKI F
Sbjct: 68 NSLTRLFPNEFANFYNAVSLHMENNGLHEI-VPGAFLGLQLVKRLHINNNKIKSFRKQTF 126
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS---NEFPY 257
L +L+ L FN L+ +++ F KL++L ++ +L ++ N F Y
Sbjct: 127 LGLDDLEYLQADFNLLR--DIDPGAFQDLNKLEVLILNDNLISTLPANVFQY 176
>UNIPROTKB|F1LN63 [details] [associations]
symbol:Tlr3 "Protein Tlr3" species:10116 "Rattus
norvegicus" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0034346 "positive
regulation of type III interferon production" evidence=IEA]
[GO:0042346 "positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:735171 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0009615 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 InterPro:IPR000372 SMART:SM00013 GO:GO:0032760
GO:GO:0043330 GO:GO:0032735 GO:GO:0042346 GO:GO:0045078
InterPro:IPR026906 Pfam:PF13306 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:WINKTHT IPI:IPI00382156
Ensembl:ENSRNOT00000035781 ArrayExpress:F1LN63 Uniprot:F1LN63
Length = 905
Score = 236 (88.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 140/597 (23%), Positives = 250/597 (41%)
Query: 3 LDLSHNKLSVLN--MATLYS--NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
LD N +S L + + V LQH + + DQ F + L EL + ++
Sbjct: 81 LDAGFNSISKLEPELCQILPLLKVLNLQHNELSQIS-DQTFA-FCTNLTELHLMSNSIRK 138
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
I + F N + L L +L +G+ ++EN++++ L + NK+ L
Sbjct: 139 IKSNPFKNQKSLIKLDLSRNGLSSTKLGTGV--QLENLQELLL--AKNKIFALRSE---- 190
Query: 119 NVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNED 178
+L LG + L+ + C G LF L + A+ N N E
Sbjct: 191 ---ELDFLGNSSLQKLDLSSNPLKEFSPGCFHAI---GKLFVLLLNN---AQLNLNLTEK 241
Query: 179 QVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLY--NLQELSLSFNKLQIIELNSNVFDV 236
+ N++ + + F L NL L LS+N L+ + ++ F
Sbjct: 242 LCWELSNTSIQNLSLAN--NQLLATSNSTFSGLKQTNLTSLDLSYNSLRYV--GNDAFSW 297
Query: 237 FEKLQLLEISFSLFNS---NEFP-----YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
L+ L + ++ S + F Y+ K T + +A+ ++ NI ++S L
Sbjct: 298 LPHLKYLSLEYNNIQSLTPHSFRGLSNLRYLSLKRAFTKQSVALASH--PNIDDFSFQWL 355
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY--LELIESDTFYNLKE--LNTI 344
L ++N++ N I I +N F + LK + LS + L+ + ++TF +L L T+
Sbjct: 356 KCLEHLNMDDNTIPGIKSNTFTGLVS--LKYLSLSKTFTGLQTLTNETFVSLTHSPLLTL 413
Query: 345 TLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY-IYPNAFVNLPNLVKLDLQDNKLKDFN 403
L+ N + I + +F L + + L N+I+ + + L N+ ++ L NK
Sbjct: 414 NLTKNHISKIASGTFSWLGQLRILDLGLNEIEQELTGQEWRGLGNIFEIYLSYNKYLQLT 473
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTF 462
F+ + S Q L L + ++ + P+Y + LDLSNN I + + L+
Sbjct: 474 SKSFTLVPSLQ---RLMLRRVALKSVDISPSPFRPLYNLTILDLSNNNIANLNEDLLEGL 530
Query: 463 ADSLRKLYLDFNEI----KHLDATAFGN----LDVLELLSLEHNNIAVVVKRTFIGMPNL 514
++L L N + KH + N L L +L+LE N + + + F + L
Sbjct: 531 -ENLEILDFQHNNLARLWKHANPGGPVNFLKGLSHLHILNLESNGLDEIPVKVFKNLFEL 589
Query: 515 QIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI--IEKLDISYN 569
+ I+L N ++ L F LR LN+ N + S+ + VF + LD+S+N
Sbjct: 590 KSINLGLNNLNTLLPSIFDDQTSLRSLNLQKNLITSVEKSVFGPAFHNLNSLDMSFN 646
Score = 205 (77.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 111/475 (23%), Positives = 209/475 (44%)
Query: 108 LSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLN-GNLFRHLQKSI 166
+S N T+ NV HL T + D N++ L N R+ Q ++
Sbjct: 23 VSSTNQCTVRYNVADCSHLKLTHIPDDLPSNITVLNLTH--NQLRGLPPANFTRYSQLAL 80
Query: 167 VKAKKNNNNN-EDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQ 225
+ A N+ + E ++ + + N+++ ++ F NL EL L N ++
Sbjct: 81 LDAGFNSISKLEPELC---QILPLLKVLNLQHNELSQISDQTFAFCTNLTELHLMSNSIR 137
Query: 226 IIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSL 285
++ SN F + L L++S + +S + + L L+ L + N I +R+ L
Sbjct: 138 --KIKSNPFKNQKSLIKLDLSRNGLSSTKLGTGV---QLENLQELLLAKNKIFALRSEEL 192
Query: 286 YNL--TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL-IESDTFYNLKE-- 340
L +SL ++L N + + FH I K L + L+N L L + + L
Sbjct: 193 DFLGNSSLQKLDLSSNPLKEFSPGCFHA-IGK-LFVLLLNNAQLNLNLTEKLCWELSNTS 250
Query: 341 LNTITLSYNLLKSIKTTSFKNLN--NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+ ++L+ N L + ++F L N+ ++ LS+N ++Y+ +AF LP+L L L+ N
Sbjct: 251 IQNLSLANNQLLATSNSTFSGLKQTNLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLEYNN 310
Query: 399 LKDFNLNVFSNITS-KQTPMNLNLSNNYITNL-YENDKKQAPIYIKSLDLSNNRIQEVPV 456
++ + F +++ + + + + + N + ++K L+ N +P
Sbjct: 311 IQSLTPHSFRGLSNLRYLSLKRAFTKQSVALASHPNIDDFSFQWLKCLEHLNMDDNTIPG 370
Query: 457 NFLQTFAD--SLRKLYLD--FNEIKHLDATAFGNLDVLELLSLE--HNNIAVVVKRTFIG 510
TF SL+ L L F ++ L F +L LL+L N+I+ + TF
Sbjct: 371 IKSNTFTGLVSLKYLSLSKTFTGLQTLTNETFVSLTHSPLLTLNLTKNHISKIASGTFSW 430
Query: 511 MPNLQIIDLSFNEISM-LTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKL 564
+ L+I+DL NEI LTG+++ + + +S+N+ L F T++ L
Sbjct: 431 LGQLRILDLGLNEIEQELTGQEWRGLGNIFEIYLSYNKYLQLTSKSF--TLVPSL 483
Score = 195 (73.7 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 81/325 (24%), Positives = 142/325 (43%)
Query: 270 LAMDNNNIKNI--RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
L + +N ++ + N++ Y+ +L ++ +N ISK+ L I LK + L +N L
Sbjct: 57 LNLTHNQLRGLPPANFTRYSQLAL--LDAGFNSISKLEPELCQ--ILPLLKVLNLQHNEL 112
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
I TF L + L N ++ IK+ FKN +++ + LS N + V L
Sbjct: 113 SQISDQTFAFCTNLTELHLMSNSIRKIKSNPFKNQKSLIKLDLSRNGLSSTKLGTGVQLE 172
Query: 388 NLVKLDLQDNK---LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
NL +L L NK L+ L+ N + ++ ++ N + + K + + +
Sbjct: 173 NLQELLLAKNKIFALRSEELDFLGNSSLQKLDLSSNPLKEFSPGCFHAIGKLFVLLLNNA 232
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE--HNNIAV 502
L+ N +++ T S++ L L N++ + F L L SL+ +N++
Sbjct: 233 QLNLNLTEKLCWELSNT---SIQNLSLANNQLLATSNSTFSGLKQTNLTSLDLSYNSLRY 289
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN------RLRSLPR-DV 555
V F +P+L+ + L +N I LT F LR L++ L S P D
Sbjct: 290 VGNDAFSWLPHLKYLSLEYNNIQSLTPHSFRGLSNLRYLSLKRAFTKQSVALASHPNIDD 349
Query: 556 FSNTIIEKLDISYNQDKIRPGRESN 580
FS ++ L+ D PG +SN
Sbjct: 350 FSFQWLKCLEHLNMDDNTIPGIKSN 374
Score = 142 (55.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 65/256 (25%), Positives = 116/256 (45%)
Query: 325 NYLEL--IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
++L+L I D N+ LN L++N L+ + +F + + + FN I + P
Sbjct: 39 SHLKLTHIPDDLPSNITVLN---LTHNQLRGLPPANFTRYSQLALLDAGFNSISKLEPEL 95
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
LP L L+LQ N+L + F+ T+ L+L +N I + N K IK
Sbjct: 96 CQILPLLKVLNLQHNELSQISDQTFAFCTNLT---ELHLMSNSIRKIKSNPFKNQKSLIK 152
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL---DATAFGNLDVLELLSLEHNN 499
LDLS N + + ++L++L L N+I L + GN L+ L L N
Sbjct: 153 -LDLSRNGLSSTKLG-TGVQLENLQELLLAKNKIFALRSEELDFLGNSS-LQKLDLSSNP 209
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK---LRILNISHNRLRSLPRDVF 556
+ F + L ++ L+ ++++ E+ + ++ L++++N+L + F
Sbjct: 210 LKEFSPGCFHAIGKLFVLLLNNAQLNLNLTEKLCWELSNTSIQNLSLANNQLLATSNSTF 269
Query: 557 SN---TIIEKLDISYN 569
S T + LD+SYN
Sbjct: 270 SGLKQTNLTSLDLSYN 285
Score = 131 (51.2 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 112/518 (21%), Positives = 213/518 (41%)
Query: 40 GIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQM 99
G+ + L L+++ L+++ AF + L+L+ N I+ L F + N+ +
Sbjct: 271 GLKQTNLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLEYNN--IQSLTPHSFRGLSNLRYL 328
Query: 100 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLF 159
+L + K SV +A+ + N+ L+ + N T L +
Sbjct: 329 SLKRAFTKQSVA-LAS-HPNIDDFSFQWLKCLEHLNMDDNTIPGI--KSNTFTGLVSLKY 384
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSL 219
L K+ + NE VS +KI +G F L L+ L L
Sbjct: 385 LSLSKTFTGLQ--TLTNETFVSLTHSPLLTLNLTKNHISKIA--SGT-FSWLGQLRILDL 439
Query: 220 SFNKLQIIELNS-------NVFDVF----EKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
N+++ EL N+F+++ + LQL SF+L S + ++ + + L+
Sbjct: 440 GLNEIEQ-ELTGQEWRGLGNIFEIYLSYNKYLQLTSKSFTLVPSLQ---RLMLRRV-ALK 494
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN-NLFHFNIHKRLKEIRLSNNYL 327
+ + + + + N ++ +L++ N NL + + + N + F H L + N
Sbjct: 495 SVDISPSPFRPLYNLTILDLSNNNIANLNEDLLEGLENLEILDFQ-HNNLARLWKHANPG 553
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+ + L L+ + L N L I FKNL + +I L N + + P+ F +
Sbjct: 554 GPV--NFLKGLSHLHILNLESNGLDEIPVKVFKNLFELKSINLGLNNLNTLLPSIFDDQT 611
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
+L L+LQ N + +VF NLN S + N ++ + ++ L+ +
Sbjct: 612 SLRSLNLQKNLITSVEKSVFGPAFH-----NLN-SLDMSFNPFDCTCESIAWFVTWLNQT 665
Query: 448 NNRIQEVPVNFL----QTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+ I E+ ++L Q + KL+ D + K D+ F L ++ +L +AV+
Sbjct: 666 HTNIPELSTHYLCNTPQRYHGLPVKLF-DTSSCK--DSAPFQLLFIINTSTLLTFILAVL 722
Query: 504 V------KRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
+ + +F ++ I L F EI GEQF ++
Sbjct: 723 LIHFEGWRISFYWNVSVHRI-LGFKEIDA-QGEQFEYT 758
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 231 (86.4 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 76/292 (26%), Positives = 133/292 (45%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L L N +K++ + L L + + N I + ++ F+ L + L+NN
Sbjct: 75 LSKLVFLNGMLKSVSGEAFERLVELRELEISGN-ICWMSLDIQTFSSLTNLTRLLLNNNK 133
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
L +++ F++L +L + L N L + F+ L+ + + LSFNQI + F N
Sbjct: 134 LSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNN 193
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
L L LQ NK+ + +F+++ Q LNL +N I L P +K+L L
Sbjct: 194 SELRVLSLQANKIPNLPDGIFTHLDHLQ---ELNLRSNLIRVLTPGS---FPASLKTLIL 247
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
N ++++ T + L L N + + A F NL LE L L N I+ +
Sbjct: 248 KKNLLEKLTNAVFHTL-HYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGS 306
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
F G+ +++ + L N + + L++L++S+N LRS+P F +
Sbjct: 307 VFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFED 358
Score = 228 (85.3 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 88/355 (24%), Positives = 165/355 (46%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL-FNSNEFPYY 258
I DL+ F L +L L+ + + F+ +L+ LEIS ++ + S + +
Sbjct: 61 IPDLDQQSFPETLRLSKLVFLNGMLKSV--SGEAFERLVELRELEISGNICWMSLDIQTF 118
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+L L L ++NN + + ++L L + L N +S + LF +H RL+
Sbjct: 119 ---SSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQ-RLH-RLQ 173
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
E+ LS N + + ++ F N EL ++L N + ++ F +L+++ + L N I+ +
Sbjct: 174 ELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVL 233
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
P +F +L L L+ N L+ VF + L+LS N +T + D Q
Sbjct: 234 TPGSFP--ASLKTLILKKNLLEKLTNAVFHTL---HYITYLDLSQNSLTEV-PADLFQNL 287
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
I +++LDLS NRI + + + S++ +YL N + +DA + L+LL L +N
Sbjct: 288 ISLETLDLSENRISTLAGSVFKGLF-SIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNN 346
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
++ + F + + +L N S G +++ + L +H ++ L R
Sbjct: 347 SLRSIPSGFFEDLDFQCVFELRGNPWSCDCGIHYFYDW----LKYNHKHVKDLSR 397
Score = 207 (77.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 73/261 (27%), Positives = 128/261 (49%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI +++E+ + + + ++ +F L+ + +LKS+ +F+ L + + +S
Sbjct: 46 NISTQVRELIVVASGIPDLDQQSFPETLRLSKLVFLNGMLKSVSGEAFERLVELRELEIS 105
Query: 372 FNQI-KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
N + F +L NL +L L +NKL + +F ++ Q M L L N ++ L
Sbjct: 106 GNICWMSLDIQTFSSLTNLTRLLLNNNKLSGVDAGLFHSL--HQLEM-LQLRGNGLSFL- 161
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
Q ++ LDLS N+I + Q ++ LR L L N+I +L F +LD L
Sbjct: 162 SGRLFQRLHRLQELDLSFNQISSLSTELFQNNSE-LRVLSLQANKIPNLPDGIFTHLDHL 220
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
+ L+L N I V+ +F +L+ + L N + LT F+ + L++S N L
Sbjct: 221 QELNLRSNLIRVLTPGSFPA--SLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTE 278
Query: 551 LPRDVFSNTI-IEKLDISYNQ 570
+P D+F N I +E LD+S N+
Sbjct: 279 VPADLFQNLISLETLDLSENR 299
Score = 196 (74.1 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 63/215 (29%), Positives = 112/215 (52%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
R N ++ L+G LF+ L+ LQEL LSFN QI L++ +F +L++L + + +
Sbjct: 154 RGNGLSFLSGRLFQRLHRLQELDLSFN--QISSLSTELFQNNSELRVLSLQANKIPN--L 209
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
P I +L+ L+ L + +N I+ + S SL + L+ N + K+ N +FH +H
Sbjct: 210 PDGIFT-HLDHLQELNLRSNLIRVLTPGSFP--ASLKTLILKKNLLEKLTNAVFH-TLHY 265
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ + LS N L + +D F NL L T+ LS N + ++ + FK L ++ ++ L N +
Sbjct: 266 -ITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSL 324
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNI 410
+ + + +L LDL +N L+ F ++
Sbjct: 325 ISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDL 359
Score = 186 (70.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 63/233 (27%), Positives = 114/233 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK++ ++ LF L+ L+ L L N L L+ +F +LQ L++SF+ +S
Sbjct: 132 NKLSGVDAGLFHSLHQLEMLQLRGNGLSF--LSGRLFQRLHRLQELDLSFNQISSLSTEL 189
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ +N + L L++ N I N+ + +L L +NL N I + F + L
Sbjct: 190 F---QNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFPAS----L 242
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
K + L N LE + + F+ L + + LS N L + F+NL ++ + LS N+I
Sbjct: 243 KTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRIST 302
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL-NLSNNYITNL 429
+ + F L ++ + LQ N L ++V +++ Q + L +LSNN + ++
Sbjct: 303 LAGSVFKGLFSIKSVYLQKNSL----ISVDAHLLKDQHDLQLLDLSNNSLRSI 351
Score = 173 (66.0 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 45/142 (31%), Positives = 88/142 (61%)
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFAD--SLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
+ ++ L++S N I + ++ +QTF+ +L +L L+ N++ +DA F +L LE+L L
Sbjct: 97 VELRELEISGN-ICWMSLD-IQTFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLR 154
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N ++ + R F + LQ +DLSFN+IS L+ E F + +LR+L++ N++ +LP +F
Sbjct: 155 GNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIF 214
Query: 557 SNTI-IEKLDISYNQDKI-RPG 576
++ +++L++ N ++ PG
Sbjct: 215 THLDHLQELNLRSNLIRVLTPG 236
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 60/273 (21%), Positives = 119/273 (43%)
Query: 45 KLRELEITGKDLKF-IDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLD 102
+LRELEI+G +D F ++ +LT L + N ++ + +GLF + +E L
Sbjct: 98 ELRELEISGNICWMSLDIQTFSSLT---NLTRLLLNNNKLSGVDAGLFHSLHQLEM--LQ 152
Query: 103 LSHNKLSVLNMATLYSNVTKLQHLG------TTILKDREKXXXXXXXXXXRCNKITDLNG 156
L N LS L+ L+ + +LQ L +++ + + + NKI +L
Sbjct: 153 LRGNGLSFLS-GRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPD 211
Query: 157 NLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQE 216
+F HL + N +N +V + N + L +F L+ +
Sbjct: 212 GIFTHLDHL---QELNLRSNLIRVLTPGSFPASLKTLILKKNLLEKLTNAVFHTLHYITY 268
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
L LS N L E+ +++F L+ L++S + ++ + K L +++ + + N+
Sbjct: 269 LDLSQNSLT--EVPADLFQNLISLETLDLSENRISTLAGSVF---KGLFSIKSVYLQKNS 323
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ ++ + L + L ++L N + I + F
Sbjct: 324 LISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFF 356
>UNIPROTKB|Q59HI7 [details] [associations]
symbol:TLR5 "Toll-like receptor 5" species:9823 "Sus
scrofa" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0005149
"interleukin-1 receptor binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0034146 "toll-like receptor 5 signaling pathway"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027176
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005622 GO:GO:0032757
GO:GO:0071260 GeneTree:ENSGT00700000104185 SUPFAM:SSF52200
GO:GO:0034123 CTD:7100 HOVERGEN:HBG023182 KO:K10168 OMA:VSGNGWT
PANTHER:PTHR24365:SF7 EMBL:CU914644 EMBL:FJ754217 EMBL:AB208697
RefSeq:NP_001116674.1 UniGene:Ssc.69846 UniGene:Ssc.95799
Ensembl:ENSSSCT00000011909 GeneID:100144476 KEGG:ssc:100144476
Uniprot:Q59HI7
Length = 856
Score = 212 (79.7 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 88/317 (27%), Positives = 149/317 (47%)
Query: 275 NNIKNIRNYSLYNL--TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+NIK+ +++ +L +SL ++L + I ++ LF K LK + L+ N + I
Sbjct: 271 HNIKDPDHHTFASLGRSSLIQLDLSHGFIFSLNFRLF--GTLKELKVLNLAFNKINKIAD 328
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
F+ L L + +SYNLL + ++F+ L + I L N I I F L L L
Sbjct: 329 QAFHGLDNLQILNMSYNLLGELYNSNFEGLPKLAYIDLQKNHIGIIQDQTFRFLKKLNTL 388
Query: 393 DLQDNKLKDFNL-----NVFSNITSKQTPMNLNLSNNYI---TNLYEN-DKK----QAPI 439
DL+DN LK +F T N+ L+ N+I N EN D Q P
Sbjct: 389 DLRDNALKTIQFIPSIPTLFLGGNKLVTLPNIRLTANFIHLSENRLENLDNLYFLLQVP- 447
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL-DA----TAFGNLDVLELLS 494
+++ L L+ NR + SL +L+L N ++ +A F L L++L
Sbjct: 448 HLQILILNQNRFSNCNQRHAPSENPSLEQLFLGENMLQLAWEAGFCWDVFKGLSHLQVLY 507
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML-TGEQFYFSFKLRILNISHNRLRSLPR 553
L +N + + F + L+ + LS+N +++L G+ L +L++S N+L S
Sbjct: 508 LNNNYLNFLPPGVFRHLTALRGLSLSYNRLTVLYPGD---LPAHLEVLDLSRNQLLSPDP 564
Query: 554 DVFSNTIIEKLDISYNQ 570
D+F T + +D+S+N+
Sbjct: 565 DLF--TSLSAVDLSHNK 579
Score = 200 (75.5 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 85/311 (27%), Positives = 149/311 (47%)
Query: 243 LEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKIS 302
L++S S F + K L L LA N I I + + + L +L +N+ YN +
Sbjct: 292 LDLSHGFIFSLNFRLFGTLKELKVLN-LAF--NKINKIADQAFHGLDNLQILNMSYNLLG 348
Query: 303 KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNL 362
+++N+ F + K L I L N++ +I+ TF LK+LNT+ L N LK+I+ F +
Sbjct: 349 ELYNSNFE-GLPK-LAYIDLQKNHIGIIQDQTFRFLKKLNTLDLRDNALKTIQ---F--I 401
Query: 363 NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF-NLNVFSNITSKQTPMNLNL 421
++ + L N++ + PN + N + L +N+L++ NL + Q L L
Sbjct: 402 PSIPTLFLGGNKLVTL-PNIRLTA-NFIHLS--ENRLENLDNLYFLLQVPHLQI---LIL 454
Query: 422 SNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFL-QTFA--DSLRKLYLDFNEIK 477
+ N +N + ++ L L N +Q F F L+ LYL+ N +
Sbjct: 455 NQNRFSNCNQRHAPSENPSLEQLFLGENMLQLAWEAGFCWDVFKGLSHLQVLYLNNNYLN 514
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP-NLQIIDLSFNEISMLTGEQFYFSF 536
L F +L L LSL +N + V+ +P +L+++DLS N++ L+ + F+
Sbjct: 515 FLPPGVFRHLTALRGLSLSYNRLTVLYPGD---LPAHLEVLDLSRNQL--LSPDPDLFT- 568
Query: 537 KLRILNISHNR 547
L +++SHN+
Sbjct: 569 SLSAVDLSHNK 579
Score = 158 (60.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 75/273 (27%), Positives = 124/273 (45%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYI 259
I LN LF L L+ L+L+FNK+ ++ F + LQ+L +S++L Y
Sbjct: 299 IFSLNFRLFGTLKELKVLNLAFNKIN--KIADQAFHGLDNLQILNMSYNLLGE----LYN 352
Query: 260 LN-KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH-----NNLF-HFN 312
N + L L ++ + N+I I++ + L LN ++L N + I LF N
Sbjct: 353 SNFEGLPKLAYIDLQKNHIGIIQDQTFRFLKKLNTLDLRDNALKTIQFIPSIPTLFLGGN 412
Query: 313 IHKRLKEIRLSNNYLELIES-----DTFYNLKE---LNTITLSYNLLKSIKTTSFKNLNN 364
L IRL+ N++ L E+ D Y L + L + L+ N + + N
Sbjct: 413 KLVTLPNIRLTANFIHLSENRLENLDNLYFLLQVPHLQILILNQNRFSNCNQRHAPSENP 472
Query: 365 MLN-IVLSFNQIKYIYP-----NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
L + L N ++ + + F L +L L L +N L VF ++T+ +
Sbjct: 473 SLEQLFLGENMLQLAWEAGFCWDVFKGLSHLQVLYLNNNYLNFLPPGVFRHLTALR---G 529
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI 451
L+LS N +T LY D P +++ LDLS N++
Sbjct: 530 LSLSYNRLTVLYPGD---LPAHLEVLDLSRNQL 559
Score = 153 (58.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 78/263 (29%), Positives = 121/263 (46%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK-SIKTTSFKNLNNMLNIVLSFNQIK 376
K + LS NY+ + + +F L+ L + L L SI +F+NL N+ + L +QI
Sbjct: 48 KSLLLSFNYIRTVTAGSFPFLEGLQLLELGTQLTPLSIDREAFRNLPNLRILDLGHSQIA 107
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLN--VFSNITSKQTPMNLNLSNNYITNLYENDK 434
+++P+AF LP+L +L L L D L F N+ S L+LS N I +L+ +
Sbjct: 108 FLHPDAFQELPHLSELRLFSCGLSDAILKDGYFRNLASLT---RLDLSKNQIQSLHLHPS 164
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTF-ADSLRKLYLDFNEIKH---LD----ATAFGN 486
Q +K++DLS N+I V L+ +L L L N + +D F N
Sbjct: 165 FQELNSLKAIDLSLNQIPLVCEQGLKPLQGKTLSFLSLADNNLYSRVSVDWGKCMNPFRN 224
Query: 487 LDVLELLSLEHNNIAVVVKRTFIGMPN-LQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
+ LE+L + N R F N QI L M +G F F I + H
Sbjct: 225 M-ALEMLDVSGNGWTADTTRNFSQAVNGSQISSLVLAHHIMGSG----FGFH-NIKDPDH 278
Query: 546 NRLRSLPRDVFSNTIIEKLDISY 568
+ SL R +++I+ LD+S+
Sbjct: 279 HTFASLGR----SSLIQ-LDLSH 296
Score = 108 (43.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 76/347 (21%), Positives = 150/347 (43%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNK 262
L FR+L +L L LS N++Q + L+ + F L+ +++S N+ P + +
Sbjct: 135 LKDGYFRNLASLTRLDLSKNQIQSLHLHPS-FQELNSLKAIDLSL-----NQIPL-VCEQ 187
Query: 263 NLN-----TLEWLAM-DNNNIKNI-----RNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
L TL +L++ DNN + + + + +L +++ N + F
Sbjct: 188 GLKPLQGKTLSFLSLADNNLYSRVSVDWGKCMNPFRNMALEMLDVSGNGWTADTTRNFSQ 247
Query: 312 NIH-KRLKEIRLSNNYL-------ELIESD--TFYNL--KELNTITLSYNLLKSIKTTSF 359
++ ++ + L+++ + + + D TF +L L + LS+ + S+ F
Sbjct: 248 AVNGSQISSLVLAHHIMGSGFGFHNIKDPDHHTFASLGRSSLIQLDLSHGFIFSLNFRLF 307
Query: 360 KNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL 419
L + + L+FN+I I AF L NL L++ N L + N SN +
Sbjct: 308 GTLKELKVLNLAFNKINKIADQAFHGLDNLQILNMSYNLLGEL-YN--SNFEGLPKLAYI 364
Query: 420 NLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
+L N+I + ++ + + +LDL +N ++ + F S+ L+L N++ L
Sbjct: 365 DLQKNHI-GIIQDQTFRFLKKLNTLDLRDNALKTIQ------FIPSIPTLFLGGNKLVTL 417
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFI-GMPNLQIIDLSFNEIS 525
+ L N + + F+ +P+LQI+ L+ N S
Sbjct: 418 PNIRL----TANFIHLSENRLENLDNLYFLLQVPHLQILILNQNRFS 460
Score = 72 (30.4 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 33/134 (24%), Positives = 59/134 (44%)
Query: 2 TLDLSHNKLSVLNMATL-YSNVTKLQHLGT--TILKGDQLQGIFN-SKLRELEITGKDLK 57
+L LS N + + + + +L LGT T L D+ + N LR L++ +
Sbjct: 49 SLLLSFNYIRTVTAGSFPFLEGLQLLELGTQLTPLSIDR-EAFRNLPNLRILDLGHSQIA 107
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATL 116
F+ P AF + +L L L G F N+ +T LDLS N++ L++
Sbjct: 108 FLHPDAFQELPHLSELRLFSCGLSDAILKDGYF---RNLASLTRLDLSKNQIQSLHLHPS 164
Query: 117 YSNVTKLQHLGTTI 130
+ + L+ + ++
Sbjct: 165 FQELNSLKAIDLSL 178
>UNIPROTKB|F1RP61 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AEMK01182519 EMBL:CT963117 EMBL:CU041325
RefSeq:XP_003357919.1 Ensembl:ENSSSCT00000010403 GeneID:100155909
KEGG:ssc:100155909 Uniprot:F1RP61
Length = 964
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 46/160 (28%), Positives = 82/160 (51%)
Query: 417 MNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNE 475
+ ++ N I +L E + PIY L LS N + + P F+ S+ L+L N
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIY--HLLLSGNLLNRLYPNEFVNYTGASI--LHLGSNV 116
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
I+ ++ AF L L L L +N + ++ TF+G+ +L+ + + +N IS++ F
Sbjct: 117 IQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKL 176
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
L++L ++ N L SLP ++F + LD+ N+ K+ P
Sbjct: 177 HLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLP 216
Score = 154 (59.3 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + N + + N T + ++L N I I FH + + L+ + L+NN LEL
Sbjct: 86 LLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFH-GL-RGLRRLHLNNNKLEL 143
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ DTF L+ L + + YN + I+ +F L+ + ++L+ N + + N F +P L
Sbjct: 144 LRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-L 202
Query: 390 VKLDLQDNKLK 400
LDL+ N+LK
Sbjct: 203 THLDLRGNRLK 213
Score = 136 (52.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L NN + +I+ F +L L + L+ N ++ + F L ++ + L +N I+ I
Sbjct: 438 LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQ 497
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
P F +PNL L L +N L+ VFS +T + LNL +N+ T+L
Sbjct: 498 PGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTL----LRLNLRSNHFTSL 543
Score = 134 (52.2 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 47/162 (29%), Positives = 77/162 (47%)
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLR 467
N+ +N+N I ++ E K P K + L+ N I V +FL+ A L
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPK--PYNPKKMYLTENYIALVRRSDFLE--ATGLD 436
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L+L N I + AFG+L L L L N I + F G+ +LQ + L +N I +
Sbjct: 437 LLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREI 496
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
F L++L +++N L+++P VFS + +L++ N
Sbjct: 497 QPGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLRLNLRSN 538
Score = 131 (51.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 38/153 (24%), Positives = 78/153 (50%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N I +R T L+ ++L N+IS I + F ++ L+ + L+ N +E +
Sbjct: 416 LTENYIALVRRSDFLEATGLDLLHLGNNRISMIQDRAFG-DL-TNLRRLYLNGNRIERLS 473
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
+ FY L+ L + L YNL++ I+ +F + N+ + L+ N ++ + F L L++
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQPGTFDPVPNLQLLFLNNNLLQTMPSGVFSGL-TLLR 532
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L+L+ N +L V + ++ + ++L +N
Sbjct: 533 LNLRSNHFT--SLPVSGVLDQLKSLIQIDLHDN 563
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 39/153 (25%), Positives = 74/153 (48%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N L + + F N + + L N+++ I+T +F L + + L+ N+++ + +
Sbjct: 88 LSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDD 147
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F+ L +L L + N + N F + Q L L++N +++L N + P+
Sbjct: 148 TFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQV---LILNDNLLSSLPNNLFRFVPL-- 202
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
LDL NR++ +P L D + +L L+ N
Sbjct: 203 THLDLRGNRLKLLPYMGLLQHMDKVVELQLEEN 235
Score = 119 (46.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++ L N +++++ N F N + + L +N ++ IE+ F+ L+ L + L+ N L+
Sbjct: 85 HLLLSGNLLNRLYPNEF-VN-YTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F L ++ + + +N I I PNAF L L L L DN L N+F
Sbjct: 143 LLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLF 197
Score = 97 (39.2 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
+ + L LS N L L N F + +L + ++ E + L L L
Sbjct: 81 FPIYHLLLSGNLLN--RLYPNEFVNYTGASILHLGSNVIQDIETGAF---HGLRGLRRLH 135
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
++NN ++ +R+ + L SL Y+ ++YN IS I N F +H L+ + L++N L +
Sbjct: 136 LNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFG-KLHL-LQVLILNDNLLSSLP 193
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSF-KNLNNMLNIVLSFN 373
++ F L + L N LK + ++++ ++ + L N
Sbjct: 194 NNLF-RFVPLTHLDLRGNRLKLLPYMGLLQHMDKVVELQLEEN 235
Score = 90 (36.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 33/130 (25%), Positives = 67/130 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I D+ F L L+ L L+ NKL++ L + F E L+ L++ ++ + E P
Sbjct: 115 NVIQDIETGAFHGLRGLRRLHLNNNKLEL--LRDDTFLGLESLEYLQVDYNYISVIE-PN 171
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI-HNNLF-HFNIHK 315
K L+ L+ L +++N + ++ N +L+ L +++L N++ + + L H +
Sbjct: 172 -AFGK-LHLLQVLILNDNLLSSLPN-NLFRFVPLTHLDLRGNRLKLLPYMGLLQHMD--- 225
Query: 316 RLKEIRLSNN 325
++ E++L N
Sbjct: 226 KVVELQLEEN 235
Score = 65 (27.9 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 18 LYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKI 77
L+ N KL+ +L+ D G+ L L++ + I+P+AF + L L
Sbjct: 134 LHLNNNKLE-----LLRDDTFLGL--ESLEYLQVDYNYISVIEPNAFGKLHLLQVLILN- 185
Query: 78 TNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ + LP+ LF + LDL N+L +L L ++ K+ L
Sbjct: 186 -DNLLSSLPNNLF---RFVPLTHLDLRGNRLKLLPYMGLLQHMDKVVEL 230
Score = 41 (19.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 22/106 (20%), Positives = 44/106 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
L + +N +SV+ KL L IL + L + N+ R + +T DL+
Sbjct: 158 LQVDYNYISVIEPNAF----GKLHLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLK 213
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
+ + K+ Q+EE P ++ +++ +S++ L
Sbjct: 214 LLPYMGLLQHMD-KVVELQLEENPWNCSCELISLKDWLDSISYSAL 258
>FB|FBgn0013272 [details] [associations]
symbol:Gp150 "Gp150" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007185
"transmembrane receptor protein tyrosine phosphatase signaling
pathway" evidence=IDA] [GO:0048749 "compound eye development"
evidence=IMP] [GO:0002121 "inter-male aggressive behavior"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005886 InterPro:IPR003591 SMART:SM00369 GO:GO:0002121
ChiTaRS:ANPEP GO:GO:0048749 GO:GO:0007185 FlyBase:FBgn0013272
EMBL:BT015195 ProteinModelPortal:Q6AWQ3 STRING:Q6AWQ3 PRIDE:Q6AWQ3
InParanoid:Q6AWQ3 ArrayExpress:Q6AWQ3 Bgee:Q6AWQ3 Uniprot:Q6AWQ3
Length = 1076
Score = 236 (88.1 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 100/370 (27%), Positives = 166/370 (44%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
+++EL S N L +ELN F + + +S + + + P K + LE L +
Sbjct: 391 SIEELDFSRNNL--MELNPKAFSHLSNVVYINLSQN--SLKKLPEKAFEK-VTLLEELDL 445
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
N++ + ++N T+L+ ++L+YN N HF K L+++ LS N + +
Sbjct: 446 SYNSLTELPR-DIFNGTTLSILHLKYNTF----NGDLHFGT-KDLQQLDLSFNSIVQVHH 499
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
F + L + L N +K I+ SF L N+ +I LS N + I F L +
Sbjct: 500 SMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVI 559
Query: 393 DLQDN-KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI 451
L DN +L + F + + + T L++SN I L P ++ +L L+ N I
Sbjct: 560 RLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMP-HLTTLKLAWNNI 618
Query: 452 QEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGM 511
+P T L L L N I +D F + L LSL N I+ + R F+ +
Sbjct: 619 NHLPREIF-TELHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGNPISRLSVRLFLPL 677
Query: 512 PNLQIIDLSFNEISMLTGEQF----YFSF-KLRILNISHNRLRSLP-RDVFSNTIIEKLD 565
L+ +D++ E++ L ++ Y F LR N S N ++ + DV S + LD
Sbjct: 678 HQLRCLDVNDCELTTLLSDRDLGAGYKIFDSLRSFNASGNLIKKITSEDVKSFKNLRSLD 737
Query: 566 ISYNQDKIRP 575
I+ N K P
Sbjct: 738 ITNNPLKCTP 747
Score = 231 (86.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 79/280 (28%), Positives = 135/280 (48%)
Query: 281 RNYSLYNLTSLNYIN--LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
+N L N+ S+ N LEY +H FH +++ L + L++ L +I DTF
Sbjct: 312 QNLGLKNVASIKIANCTLEY-----LHAEAFH-GLNE-LYAVNLTDVGLAIINPDTFVGN 364
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLN-IVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
K+L +T+S N L + + + ++ + + S N + + P AF +L N+V ++L N
Sbjct: 365 KKLRMLTISGNDLSVMSSIHYLLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYINLSQN 424
Query: 398 KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN 457
LK F +T + L+LS N +T L + + I L L N
Sbjct: 425 SLKKLPEKAFEKVTLLE---ELDLSYNSLTELPRDIFNGTTLSI--LHLKYNTFN----G 475
Query: 458 FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
L L++L L FN I + + F + L L+L+ N I + +F+ + NL+ I
Sbjct: 476 DLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHI 535
Query: 518 DLSFNEISMLTGEQFYFSFKLRILNISHN-RLRSLPRDVF 556
DLS N++ ++G F+ + +L ++ ++ N RL LP D F
Sbjct: 536 DLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDGF 575
Score = 222 (83.2 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 87/354 (24%), Positives = 160/354 (45%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNK 262
+N + F L+ L++S N L ++ S++ + + + E+ FS N E +
Sbjct: 356 INPDTFVGNKKLRMLTISGNDLSVM---SSIHYLLKSSSIEELDFSRNNLMELNPKAFS- 411
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+L+ + ++ + N++K + + +T L ++L YN ++++ ++F+ L + L
Sbjct: 412 HLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGTT---LSILHL 468
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
N D + K+L + LS+N + + + F + + N+ L N IK I P++
Sbjct: 469 KYN---TFNGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDS 525
Query: 383 FVNLPNLVKLDLQDNKLKDFN-LNVFSNITSKQTPMNLNLSNNYI-TNLYENDKKQAPIY 440
F+ L NL +DL N L + + F N +N N + + T+ + + + +Y
Sbjct: 526 FLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVY 585
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
LD+SN I + T L L L +N I HL F L L L L +N I
Sbjct: 586 Y--LDISNCAIGPLGHKAFSTMPH-LTTLKLAWNNINHLPREIFTELHKLIDLDLSNNLI 642
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
+ F+ L + L+ N IS L+ F +LR L+++ L +L D
Sbjct: 643 TRMDDLIFMDNGELTKLSLAGNPISRLSVRLFLPLHQLRCLDVNDCELTTLLSD 696
Score = 221 (82.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 93/357 (26%), Positives = 165/357 (46%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNK 262
L+ F L L ++L+ L II N + F +KL++L IS + + +Y+L
Sbjct: 332 LHAEAFHGLNELYAVNLTDVGLAII--NPDTFVGNKKLRMLTISGNDLSVMSSIHYLLKS 389
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+ ++E L NN+ + + +L+++ YINL N + K+ F + L+E+ L
Sbjct: 390 S--SIEELDFSRNNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFE-KV-TLLEELDL 445
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S N L + D F N L+ + L YN K+L + LSFN I ++ +
Sbjct: 446 SYNSLTELPRDIF-NGTTLSILHLKYNTFNGDLHFGTKDLQQL---DLSFNSIVQVHHSM 501
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN-DKKQAPIYI 441
F +P L L+L+ N +K + F +T K +++LS N + + K + + +
Sbjct: 502 FDKMPGLTNLNLKGNGIKKIQPDSF--LTLKNL-RHIDLSINDLDQISGMLFFKNSELDV 558
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE--IKHLDATAFGNLDVLELLSLEHNN 499
L+ N R+ ++P + +++ YLD + I L AF + L L L NN
Sbjct: 559 IRLN-DNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNN 617
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
I + + F + L +DLS N I+ + F + +L L+++ N + L +F
Sbjct: 618 INHLPREIFTELHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGNPISRLSVRLF 674
Score = 209 (78.6 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 99/367 (26%), Positives = 165/367 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + +LN F HL N+ ++LS N L+ +L F+ L+ L++S++ + E P
Sbjct: 400 NNLMELNPKAFSHLSNVVYINLSQNSLK--KLPEKAFEKVTLLEELDLSYN--SLTELPR 455
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
I N TL L + N ++ +L L+ L +N I ++H+++F + L
Sbjct: 456 DIFNGT--TLSILHLKYNTFNGDLHFGTKDLQQLD---LSFNSIVQVHHSMF--DKMPGL 508
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFN-QI 375
+ L N ++ I+ D+F LK L I LS N L I F N+ L+++ L+ N ++
Sbjct: 509 TNLNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFK-NSELDVIRLNDNPRL 567
Query: 376 KYIYPNAFVNLPN---LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
+ + F++ + LD+ + + FS + T L L+ N I +L
Sbjct: 568 SQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTT---LKLAWNNINHLPRE 624
Query: 433 DKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+ I LDLSNN I + + F+ L KL L N I L F L L
Sbjct: 625 IFTELHKLI-DLDLSNNLITRMDDLIFMDN--GELTKLSLAGNPISRLSVRLFLPLHQLR 681
Query: 492 LLSLEHNNIAVVVKRTFIG-----MPNLQIIDLSFNEISMLTGEQFYFSFK-LRILNISH 545
L + + ++ +G +L+ + S N I +T E SFK LR L+I++
Sbjct: 682 CLDVNDCELTTLLSDRDLGAGYKIFDSLRSFNASGNLIKKITSEDVK-SFKNLRSLDITN 740
Query: 546 NRLRSLP 552
N L+ P
Sbjct: 741 NPLKCTP 747
Score = 191 (72.3 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 109/474 (22%), Positives = 204/474 (43%)
Query: 42 FNSKLRELEITGKDLKF---IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQ 98
F S + +L +T K+ + P+ F N+ ++KI N +E L + F + E
Sbjct: 286 FGSDITDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKIANCTLEYLHAEAFHGLN--EL 343
Query: 99 MTLDLSHNKLSVLNMATLYSNVTKLQHL---GT--TILKDRE---KXXXXXXXXXXRCNK 150
++L+ L+++N T N KL+ L G +++ K R N
Sbjct: 344 YAVNLTDVGLAIINPDTFVGN-KKLRMLTISGNDLSVMSSIHYLLKSSSIEELDFSR-NN 401
Query: 151 ITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRH 210
+ +LN F HL ++V + N+ + + N +T+L ++F
Sbjct: 402 LMELNPKAFSHLS-NVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNG 460
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L L L +N N ++ + LQ L++SF NS ++ + + L L
Sbjct: 461 T-TLSILHLKYNTF-----NGDLHFGTKDLQQLDLSF---NSIVQVHHSMFDKMPGLTNL 511
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN-YLEL 329
+ N IK I+ S L +L +I+L N + +I LF N L IRL++N L
Sbjct: 512 NLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKN--SELDVIRLNDNPRLSQ 569
Query: 330 IESDTFYNLKELNTI---TLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
+ +D F + T+ +S + + +F + ++ + L++N I ++ F L
Sbjct: 570 LPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTEL 629
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLD 445
L+ LDL +N + + +F + + T L+L+ N I+ L + + P++ ++ LD
Sbjct: 630 HKLIDLDLSNNLITRMDDLIFMD-NGELT--KLSLAGNPISRL--SVRLFLPLHQLRCLD 684
Query: 446 LSN----NRIQEVPVNFLQTFADSLRKLYLDFNEIKHL---DATAFGNLDVLEL 492
+++ + + + DSLR N IK + D +F NL L++
Sbjct: 685 VNDCELTTLLSDRDLGAGYKIFDSLRSFNASGNLIKKITSEDVKSFKNLRSLDI 738
Score = 181 (68.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 92/374 (24%), Positives = 157/374 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L F + L+EL LS+N L EL ++F+ L +L + ++ FN +
Sbjct: 424 NSLKKLPEKAFEKVTLLEELDLSYNSLT--ELPRDIFNG-TTLSILHLKYNTFNGD---- 476
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L+ L+ L + N+I + + + L +NL+ N I KI + F + K L
Sbjct: 477 --LHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSF-LTL-KNL 532
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYN-LLKSIKTTSFKNLNNMLNIV---LSFN 373
+ I LS N L+ I F+ EL+ I L+ N L + T F + + + +S
Sbjct: 533 RHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNC 592
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
I + AF +P+L L L N + +F+ + ++L+LSNN IT + +
Sbjct: 593 AIGPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTELHKL---IDLDLSNNLITRMDDLI 649
Query: 434 KKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL----DATA-FGNLD 488
K L L+ N I + V LR L ++ E+ L D A + D
Sbjct: 650 FMDNGELTK-LSLAGNPISRLSVRLFLPL-HQLRCLDVNDCELTTLLSDRDLGAGYKIFD 707
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L + N I + NL+ +D++ N + Q + S+ + ++ RL
Sbjct: 708 SLRSFNASGNLIKKITSEDVKSFKNLRSLDITNNPLKCTPDFQEFISYVTLQMQMTPKRL 767
Query: 549 RSLPRDVFSNTIIE 562
L TI++
Sbjct: 768 PVLANLEDDATIVQ 781
Score = 144 (55.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 93/443 (20%), Positives = 184/443 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHL---GTTILKGDQLQGIF-NSKLRELEITGKDLKF 58
++L+ L+++N T N KL+ L G + + + +S + EL+ + +L
Sbjct: 346 VNLTDVGLAIINPDTFVGN-KKLRMLTISGNDLSVMSSIHYLLKSSSIEELDFSRNNLME 404
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
++P AF ++ + + ++ +++LP F+K+ +E+ LDLS+N L+ L
Sbjct: 405 LNPKAFSHLSNV--VYINLSQNSLKKLPEKAFEKVTLLEE--LDLSYNSLTELPRDIFNG 460
Query: 119 NVTKLQHLG-TTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNE 177
+ HL T D N I ++ ++F + K N +
Sbjct: 461 TTLSILHLKYNTFNGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKK 520
Query: 178 DQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVF 237
Q D N + ++G LF L + L+ N ++ +L ++ F +
Sbjct: 521 IQ-PDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNP-RLSQLPTDGFLSY 578
Query: 238 E---KLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYI 294
+ L+IS + +L TL+ LA NNI ++ L L +
Sbjct: 579 SGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLK-LAW--NNINHLPREIFTELHKLIDL 635
Query: 295 NLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+L N I+++ + +F N L ++ L+ N + + F L +L + ++ L ++
Sbjct: 636 DLSNNLITRMDDLIFMDN--GELTKLSLAGNPISRLSVRLFLPLHQLRCLDVNDCELTTL 693
Query: 355 KT-----TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK---DFN--- 403
+ +K +++ + S N IK I + NL LD+ +N LK DF
Sbjct: 694 LSDRDLGAGYKIFDSLRSFNASGNLIKKITSEDVKSFKNLRSLDITNNPLKCTPDFQEFI 753
Query: 404 --LNVFSNITSKQTPMNLNLSNN 424
+ + +T K+ P+ NL ++
Sbjct: 754 SYVTLQMQMTPKRLPVLANLEDD 776
>UNIPROTKB|F1P1I2 [details] [associations]
symbol:PHLPP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001849 InterPro:IPR001932
Pfam:PF00481 PROSITE:PS50003 PROSITE:PS51450 SMART:SM00233
SMART:SM00332 GO:GO:0003824 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008152 Gene3D:3.60.40.10 SUPFAM:SSF81606
GeneTree:ENSGT00440000037833 EMBL:AADN02036501 IPI:IPI00819603
Ensembl:ENSGALT00000021018 ArrayExpress:F1P1I2 Uniprot:F1P1I2
Length = 1175
Score = 236 (88.1 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 100/405 (24%), Positives = 188/405 (46%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDV--FEKLQLLEISFSLFNSNE 254
C + L NLF + +L L+L N L + E N+ + + F KL+ L +S + N +
Sbjct: 120 CCSLEHLPANLF-YSQDLTHLNLKQNFLNL-ERNTGLTSLCRFTKLKSLNLSNN--NLGD 175
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
FP + + + TL L + N ++N+ + + +L L+ N + + + L H +H
Sbjct: 176 FPLAVCS--IPTLTELNVSCNALRNVPAV-VGEMHNLQTFLLDGNFLQSLPDELEH--MH 230
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
+ L + LS N I L ++ + +S N + ++ K + ++ ++ L N
Sbjct: 231 Q-LSYVSLSFNEFTDIPG-VLEKLTAMDKLCMSGNCVDTLNLQVLKRMPHIKHVDLRLNS 288
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN----LNLSNNYITNLY 430
I+ + + L ++ +LDL+DNKL + + +F+N+ N L +S ++ LY
Sbjct: 289 IRRLEADEIDFLHHVTQLDLRDNKLGELDATIFNNVEVLHCERNQLVTLKISGYFLKALY 348
Query: 431 EN-------DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--NEIKHLDA 481
+ D P Y+ +D+S N ++ +P + DS + LD N I L A
Sbjct: 349 ASSNELVHLDVYPVPNYLTYMDISRNHLENLP----EWVCDSKKLEVLDVGHNRISELPA 404
Query: 482 TAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRIL 541
F N + +LL+ HN + + R + ++++D+ N++ L + LR L
Sbjct: 405 RLFYNSSLRKLLA-GHNLLGRLPDR--LERTQVEVLDVQHNQLLELPPNLLLKADSLRFL 461
Query: 542 NISHNRLRSLPRDVFS---NTIIEKLDISYNQ--DKIRPGRESNP 581
N S N+L LP S ++I+++L ++ N DK P +P
Sbjct: 462 NASANKLEMLPPATLSEETHSILQELYLTNNNLTDKCVPLLTGHP 506
Score = 204 (76.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 87/379 (22%), Positives = 177/379 (46%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
CN + ++ + ++NLQ L N LQ + + + +L + +SF+ F + P
Sbjct: 193 CNALRNVPA-VVGEMHNLQTFLLDGNFLQSLP---DELEHMHQLSYVSLSFNEFT--DIP 246
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+L K L ++ L M N + + L + + +++L N I ++ + F +H
Sbjct: 247 G-VLEK-LTAMDKLCMSGNCVDTLNLQVLKRMPHIKHVDLRLNSIRRLEADEIDF-LH-H 302
Query: 317 LKEIRLSNNYLELIESDTFYNLKELN-------TITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ ++ L +N L +++ F N++ L+ T+ +S LK++ +S + ++ L++
Sbjct: 303 VTQLDLRDNKLGELDATIFNNVEVLHCERNQLVTLKISGYFLKALYASSNELVH--LDVY 360
Query: 370 LSFNQIKY--IYPNAFVNLPNLV----KLDLQD---NKLKDFNLNVFSNITSKQTPMNLN 420
N + Y I N NLP V KL++ D N++ + +F N + ++ N
Sbjct: 361 PVPNYLTYMDISRNHLENLPEWVCDSKKLEVLDVGHNRISELPARLFYNSSLRKLLAGHN 420
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
L L ++ Q + LD+ +N++ E+P N L ADSLR L N+++ L
Sbjct: 421 LLGRLPDRL---ERTQVEV----LDVQHNQLLELPPNLLLK-ADSLRFLNASANKLEMLP 472
Query: 481 ATAFGNL--DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+L+ L L +NN+ G P+L+I+ +++N + + +L
Sbjct: 473 PATLSEETHSILQELYLTNNNLTDKCVPLLTGHPHLKILHMAYNRLQSFPASKMAKLEEL 532
Query: 539 RILNISHNRLRSLPRDVFS 557
++IS N+L+++P + +
Sbjct: 533 EEIDISGNKLKAIPTTIMN 551
Score = 144 (55.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 78/343 (22%), Positives = 154/343 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVF-------DVFEKLQLLEISFSLF 250
N + LN + + + +++ + L N ++ +E + F D+ + +L E+ ++F
Sbjct: 263 NCVDTLNLQVLKRMPHIKHVDLRLNSIRRLEADEIDFLHHVTQLDLRDN-KLGELDATIF 321
Query: 251 NSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYS--LYNLTSLNYIN-LEYNKISKIH-N 306
N+ E +L+ N L L + +K + S L +L N L Y IS+ H
Sbjct: 322 NNVE----VLHCERNQLVTLKISGYFLKALYASSNELVHLDVYPVPNYLTYMDISRNHLE 377
Query: 307 NLFHFNIH-KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM 365
NL + K+L+ + + +N + + + FYN L + +NLL + + +
Sbjct: 378 NLPEWVCDSKKLEVLDVGHNRISELPARLFYN-SSLRKLLAGHNLLGRLPDRLERTQVEV 436
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
L++ NQ+ + PN + +L L+ NKL+ S T L L+NN
Sbjct: 437 LDV--QHNQLLELPPNLLLKADSLRFLNASANKLEMLPPATLSEETHSIL-QELYLTNNN 493
Query: 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG 485
+T+ P ++K L ++ NR+Q P + + + L ++ + N++K + T
Sbjct: 494 LTDKCVPLLTGHP-HLKILHMAYNRLQSFPASKMAKL-EELEEIDISGNKLKAIPTTIM- 550
Query: 486 NLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT 528
N + + + H+N V + + ++ +DLS NE+S +T
Sbjct: 551 NCRRMHTV-IAHSNCIEVFPEV-MQLSEIKCVDLSCNELSEIT 591
Score = 124 (48.7 bits), Expect = 0.00064, P = 0.00064
Identities = 84/347 (24%), Positives = 151/347 (43%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
LDL NKL L+ AT+++NV L H L ++ G F L+ L + +L +D
Sbjct: 306 LDLRDNKLGELD-ATIFNNVEVL-HCERNQLVTLKISGYF---LKALYASSNELVHLDVY 360
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY-SNVT 121
N Y + I+ +E LP + D + +E LD+ HN++S L Y S++
Sbjct: 361 PVPN----YLTYMDISRNHLENLPEWVCDS-KKLE--VLDVGHNRISELPARLFYNSSLR 413
Query: 122 KLQ--HLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQK-SIVKAKKNNNNNED 178
KL H L DR + N++ +L NL + A N
Sbjct: 414 KLLAGHNLLGRLPDRLERTQVEVLDVQH-NQLLELPPNLLLKADSLRFLNASANKLEMLP 472
Query: 179 QVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFE 238
+ E+ N +TD L +L+ L +++N+LQ ++ E
Sbjct: 473 PATLSEETHSILQELYLTNNNLTDKCVPLLTGHPHLKILHMAYNRLQ--SFPASKMAKLE 530
Query: 239 KLQLLEISFSLFNSNEFPYYILN-KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLE 297
+L+ ++IS + + P I+N + ++T+ +A +N I+ + L+ + ++L
Sbjct: 531 ELEEIDISGNKLKA--IPTTIMNCRRMHTV--IA-HSNCIEVFPE--VMQLSEIKCVDLS 583
Query: 298 YNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTI 344
N++S+I N+ +L+E+ L+ N ++ T L+ LN I
Sbjct: 584 CNELSEI---TLPENLPPKLQELDLTGNPRLALDHKT---LELLNNI 624
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 231 (86.4 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 88/297 (29%), Positives = 151/297 (50%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ N+++ ++ L L ++ L++N IS I N F N +RLKE+ LS+N +
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAF--NGIRRLKELILSSNRISY 123
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++TF + L + LSYN L S+ + F+ L +L++ L N ++ I F + NL
Sbjct: 124 FLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNL 183
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP--IYIKSLDLS 447
LDL N+++ NVF+ + + L+L +N + L + P + +++L +
Sbjct: 184 ELLDLGYNRIRSLARNVFAGMIRLK---ELHLEHNQFSKL---NLALFPRLVSLQNLYMQ 237
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA-TAFGNLDVLELLSLEHNNIAVVVKR 506
N+I + T++ SL++L L NEI+ + F + L+ L+L+ N K
Sbjct: 238 WNKISVIGQTMSWTWS-SLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSN------KL 290
Query: 507 TFIGMPNLQIID--LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTII 561
TFIG +I+D +S N+IS L G + S + L N LRS + + NTII
Sbjct: 291 TFIGQ---EILDSWISLNDIS-LAGNIWECSRNICSLV---NWLRSF-KGLRENTII 339
Score = 226 (84.6 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 82/289 (28%), Positives = 137/289 (47%)
Query: 245 ISFSL-FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISK 303
+ SL +NS + Y K LN L WL +D+N+I NI + + L + L N+IS
Sbjct: 64 LGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISY 123
Query: 304 IHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
NN F + L+ + LS N L + S+ F L++L ++ L N L++I F++
Sbjct: 124 FLNNTFRPVTN--LRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCR 181
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N+ + L +N+I+ + N F + L +L L+ N+ NL +F + S Q NL +
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQ---NLYMQW 238
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N I+ + + ++ LDLS N I+ + +L++L LD N++ +
Sbjct: 239 NKISVIGQT-MSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEI 297
Query: 484 FGNLDVLELLSLEHN------NIAVVVK--RTFIGMPNLQIIDLSFNEI 524
+ L +SL N NI +V R+F G+ II S E+
Sbjct: 298 LDSWISLNDISLAGNIWECSRNICSLVNWLRSFKGLRENTIICASPKEL 346
Score = 179 (68.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/128 (35%), Positives = 71/128 (55%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N +Q++ N + + L LYLD N I ++D AF + L+ L L N I+
Sbjct: 66 LSLRYNSLQKLKYNQFKGL-NQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYF 124
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IE 562
+ TF + NL+ +DLS+N++ L EQF KL L++ N LR++P +F + +E
Sbjct: 125 LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 563 KLDISYNQ 570
LD+ YN+
Sbjct: 185 LLDLGYNR 192
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 63/259 (24%), Positives = 113/259 (43%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFPYYILNKNLNTLEWLAMDNN 275
LSL +N LQ +L N F +L L + + + N +E + + L+ L + +N
Sbjct: 66 LSLRYNSLQ--KLKYNQFKGLNQLTWLYLDHNHISNIDENAF----NGIRRLKELILSSN 119
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
I N + +T+L ++L YN++ + + F + K L + L +N L I F
Sbjct: 120 RISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFR-GLRKLLS-LHLRSNSLRTIPVRIF 177
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
+ + L + L YN ++S+ F + + + L NQ + F L +L L +Q
Sbjct: 178 QDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQ 237
Query: 396 DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
NK+ + +S Q L+LS N I Q ++ L+L +N++ +
Sbjct: 238 WNKISVIGQTMSWTWSSLQ---RLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIG 294
Query: 456 VNFLQTFADSLRKLYLDFN 474
L ++ SL + L N
Sbjct: 295 QEILDSWI-SLNDISLAGN 312
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 56/234 (23%), Positives = 104/234 (44%)
Query: 147 RCNKITDLNGNLFRHL-QKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG 205
R N + L N F+ L Q + + N+ +N D+ + N+I+
Sbjct: 69 RYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDE--NAFNGIRRLKELILSSNRISYFLN 126
Query: 206 NLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
N FR + NL+ L LS+N+L L S F KL L + + + P I ++
Sbjct: 127 NTFRPVTNLRNLDLSYNQLH--SLGSEQFRGLRKLLSLHLRSNSLRT--IPVRIF-QDCR 181
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
LE L + N I+++ + L ++LE+N+ SK++ LF + L+ + + N
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVS--LQNLYMQWN 239
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVLSFNQIKYI 378
+ +I + L + LS N +++ S F+ + N+ + L N++ +I
Sbjct: 240 KISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFI 293
Score = 83 (34.3 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTI-----LKGDQLQGIFNSKLRELEITGKDLK 57
L LS N++S + + VT L++L + L +Q +G+ KL L + L+
Sbjct: 114 LILSSNRISYF-LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGL--RKLLSLHLRSNSLR 170
Query: 58 FIDPSAFDNIDACYDLTL-KITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL 116
I F + C +L L + +I L +F + +++ L L HN+ S LN+A L
Sbjct: 171 TIPVRIFQD---CRNLELLDLGYNRIRSLARNVFAGMIRLKE--LHLEHNQFSKLNLA-L 224
Query: 117 YSNVTKLQHL 126
+ + LQ+L
Sbjct: 225 FPRLVSLQNL 234
Score = 83 (34.3 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 44/172 (25%), Positives = 84/172 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+ + LN LF L +LQ L + +NK+ +I + + LQ L++S + + P
Sbjct: 215 NQFSKLNLALFPRLVSLQNLYMQWNKISVI--GQTMSWTWSSLQRLDLSGNEIEAFSGPS 272
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN--KISKIHNNLFHF-NIH 314
+ + L+ L +D+N + I L + SLN I+L N + S+ +L ++
Sbjct: 273 VF--QCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGNIWECSRNICSLVNWLRSF 330
Query: 315 KRLKE---IRLSNNYLE---LIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
K L+E I S L+ +I++ Y++ +T T ++L +++ +FK
Sbjct: 331 KGLRENTIICASPKELQGVNVIDAVKNYSICGKSTTTERFDLARALPKPTFK 382
>WB|WBGene00003915 [details] [associations]
symbol:pan-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0002119 GO:GO:0018996 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
EMBL:Z34802 GeneTree:ENSGT00700000104056 GeneID:175596
KEGG:cel:CELE_M88.6 UCSC:M88.6b CTD:175596 HOGENOM:HOG000021363
NextBio:888834 PIR:T23841 RefSeq:NP_497925.1
ProteinModelPortal:Q9U3A0 SMR:Q9U3A0 PRIDE:Q9U3A0
EnsemblMetazoa:M88.6b WormBase:M88.6b ArrayExpress:Q9U3A0
Uniprot:Q9U3A0
Length = 594
Score = 231 (86.4 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 91/371 (24%), Positives = 168/371 (45%)
Query: 213 NLQELS-LSFNKLQIIELNSNVF--DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEW 269
NL L+ +L I + NV D+FE + ++ + + E
Sbjct: 72 NLASLNGTELGRLTIRDSTVNVLPQDLFENVFAKQVKLERCGLSTLQPNSFQSLGGSAEL 131
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ N IK + L SL ++L NKI +I ++ F K+++E+ L+ N + +
Sbjct: 132 LSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEI--DVGAFEELKKVEELLLNENDIRV 189
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+++ TF +K L +TL L+ I+ +F+ LN++ ++LS N ++ I F L NL
Sbjct: 190 LKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNL 249
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
LDL NK+ + + F + L L+NN I ++ K P + +L N
Sbjct: 250 RVLDLGSNKISNVEMKSFPKLEK------LVLNNNTIDSMKSIKLKDLPSLVVAL-FDRN 302
Query: 450 RIQEV-PVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV---- 503
+I+ + ++ F T +D + L L N + + AF + L L L++N I +
Sbjct: 303 KIESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELSSHS 362
Query: 504 ---VKRTFIG-MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
V+ F+ + L + LS N +S++ ++ S L L + HN + +
Sbjct: 363 PSQVRTPFLASLKKLVTLQLSSNNLSVIRSDELPKS--LSSLALDHNVISKIEARALEGM 420
Query: 560 IIEKLDISYNQ 570
I++L + N+
Sbjct: 421 EIKRLYLHSNK 431
Score = 196 (74.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 88/341 (25%), Positives = 159/341 (46%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
R N+I L LF L +L+ L L+ NK+Q E++ F+ +K++ L L N N+
Sbjct: 135 RENRIKKLEKGLFTGLKSLKTLDLAMNKIQ--EIDVGAFEELKKVEEL-----LLNENDI 187
Query: 256 PYYILNK--NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNI 313
+ L+ L + N N++ I+ + L SL + L N + I +F +
Sbjct: 188 RVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIF--SA 245
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
K L+ + L +N + +E +F L++L L+ N + S+K+ K+L +++ + N
Sbjct: 246 LKNLRVLDLGSNKISNVEMKSFPKLEKL---VLNNNTIDSMKSIKLKDLPSLVVALFDRN 302
Query: 374 QIKYIYPNAFVNLPNLVKLD-LQDNKLKDFNLNVFSNITSKQTP--MNLNLSNNYITNLY 430
+I+ I +++ L + D ++ L NL+ S + TP + L L N I L
Sbjct: 303 KIESI---GDMDMFGLTRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELS 359
Query: 431 ENDKKQA--PIY--IK---SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
+ Q P +K +L LS+N + + + L SL L LD N I ++A A
Sbjct: 360 SHSPSQVRTPFLASLKKLVTLQLSSNNLSVIRSDELPK---SLSSLALDHNVISKIEARA 416
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGM-P-NLQIIDLSFN 522
+++ L L N + + + TF P +++ +D+S N
Sbjct: 417 LEGMEIKRLY-LHSNKLNYLYQGTFDSFSPKSVEAVDVSLN 456
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 230 (86.0 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 77/305 (25%), Positives = 153/305 (50%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
LE L + NN+I ++ L SL ++L N + + N +F + K LK + +S+N
Sbjct: 72 LEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVF--SKLKNLKTLIISSND 129
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
++L + F L +L T++++ N L + + K L+ + N+ LS N++ + + NL
Sbjct: 130 VQL-GPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNL 188
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
L L L+ N L +F ++ K+ +L++S N I ++ E +++L+L
Sbjct: 189 GGLETLKLKQNLLSSLETGMF--LSQKELK-HLDVSENLIGDI-EEGALYGLEKLETLNL 244
Query: 447 SNNRIQEVPVNFLQTFA-DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN-NIAVVV 504
+NN++ +P N T++ +L+ L L N L+ +F L L+ L++ H+ N+ +
Sbjct: 245 TNNQLVRLPGN---TWSLPALKTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLKTIQ 301
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKL 564
TF+ + +L + +S + ++ + F L L++S+N LR + + I L
Sbjct: 302 MATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLSNNELRYVAPGMLQWPNIRNL 361
Query: 565 DISYN 569
++ N
Sbjct: 362 HLANN 366
Score = 213 (80.0 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 76/293 (25%), Positives = 139/293 (47%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS 353
++L N+IS++ + +++ L+++ L NN + + +D F L L + LS N L S
Sbjct: 51 LDLSNNRISRLSAD--ELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLS 108
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
+ F L N+ +++S N ++ + P F L L L + DN+L +V ++
Sbjct: 109 LPNEVFSKLKNLKTLIISSNDVQ-LGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGL 167
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
+ NL+LS N + ++ + +++L L N + + + + L+ L +
Sbjct: 168 R---NLDLSANKLLSMPASVMNNLG-GLETLKLKQNLLSSLETGMFLSQKE-LKHLDVSE 222
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N I ++ A L+ LE L+L +N + + T+ +P L+ +DLS N L F
Sbjct: 223 NLIGDIEEGALYGLEKLETLNLTNNQLVRLPGNTW-SLPALKTLDLSSNLFVSLETASFD 281
Query: 534 FSFKLRILNISHNR-LRSLPRDVFSN-TIIEKLDISYNQ-DKIRPGRESNPRP 583
L+ LNISH+R L+++ F + + L IS + I P NP P
Sbjct: 282 GLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSA-FNPIP 333
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 82/328 (25%), Positives = 161/328 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I+ L+ + NL++L L N I L+++VF L++L++S + S P
Sbjct: 56 NRISRLSADELSLYPNLEQLILHNNS--ITHLSADVFSTLPSLRVLDLSSNSLLS--LPN 111
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ +K L L+ L + +N+++ + L+ L +++ N++S + ++ L
Sbjct: 112 EVFSK-LKNLKTLIISSNDVQ-LGPECFAGLSQLQTLSIADNRLSFLPPSVL--KPLSGL 167
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + LS N L + + NL L T+ L NLL S++T F + + ++ +S N I
Sbjct: 168 RNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGD 227
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
I A L L L+L +N+L N +S + + +T L+LS+N +L
Sbjct: 228 IEEGALYGLEKLETLNLTNNQLVRLPGNTWS-LPALKT---LDLSSNLFVSLETASFDGL 283
Query: 438 PIYIKSLDLSNNR-IQEVPV-NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
P ++ L++S++R ++ + + F+Q SL L + + + H+ +AF + L L L
Sbjct: 284 PA-LQYLNISHSRNLKTIQMATFVQL--SSLHWLSISSSALTHIHPSAFNPIPPLSHLDL 340
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNE 523
+N + V + PN++ + L+ N+
Sbjct: 341 SNNELRYVAPG-MLQWPNIRNLHLANND 367
Score = 164 (62.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 76/335 (22%), Positives = 148/335 (44%)
Query: 217 LSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
L LS N++ + + +++ E+L L S + +++ F L +L L + +N
Sbjct: 51 LDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVF------STLPSLRVLDLSSN 104
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
++ ++ N L +L + + N + ++ F + +L+ + +++N L +
Sbjct: 105 SLLSLPNEVFSKLKNLKTLIISSNDV-QLGPECFA-GL-SQLQTLSIADNRLSFLPPSVL 161
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
L L + LS N L S+ + NL + + L N + + F++ L LD+
Sbjct: 162 KPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVS 221
Query: 396 DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
+N + D + +T LNL+NN + L N P +K+LDLS+N +
Sbjct: 222 ENLIGDIEEGALYGLEKLET---LNLTNNQLVRLPGNTWS-LPA-LKTLDLSSNLFVSLE 276
Query: 456 VNFLQTFADSLRKL-YLDFNE---IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGM 511
+F D L L YL+ + +K + F L L LS+ + + + F +
Sbjct: 277 T---ASF-DGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPI 332
Query: 512 PNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
P L +DLS NE+ + + +R L++++N
Sbjct: 333 PPLSHLDLSNNELRYVAPGMLQWP-NIRNLHLANN 366
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 64/304 (21%), Positives = 137/304 (45%)
Query: 33 LKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDK 92
L D+L N L +L + + + F + + L +++ + LP+ +F K
Sbjct: 61 LSADELSLYPN--LEQLILHNNSITHLSADVFSTLPSLR--VLDLSSNSLLSLPNEVFSK 116
Query: 93 IENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKIT 152
++N++ TL +S N + + ++ +++LQ L +I +R +
Sbjct: 117 LKNLK--TLIISSNDVQL--GPECFAGLSQLQTL--SIADNRLSFLPPSVLKPLSGLRNL 170
Query: 153 DLNGNLFRHLQKSIVK---AKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFR 209
DL+ N + S++ + ++ +S E + +L G++
Sbjct: 171 DLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEE 230
Query: 210 H-LYNLQEL-SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
LY L++L +L+ Q++ L N + + L+ L++S +LF S E + L L
Sbjct: 231 GALYGLEKLETLNLTNNQLVRLPGNTWSL-PALKTLDLSSNLFVSLETASF---DGLPAL 286
Query: 268 EWLAMDNN-NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
++L + ++ N+K I+ + L+SL+++++ + ++ IH + F N L + LSNN
Sbjct: 287 QYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAF--NPIPPLSHLDLSNNE 344
Query: 327 LELI 330
L +
Sbjct: 345 LRYV 348
>UNIPROTKB|F1RQ64 [details] [associations]
symbol:LOC100525800 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:TVFVAFC EMBL:CU928352 RefSeq:XP_003135482.1
Ensembl:ENSSSCT00000023710 Ensembl:ENSSSCT00000034435
GeneID:100525800 KEGG:ssc:100525800 Uniprot:F1RQ64
Length = 838
Score = 171 (65.3 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 62/211 (29%), Positives = 105/211 (49%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
K++ ++ N ++ ++ F + L+ + L N + +IK F NL N+ + L+ NQI+
Sbjct: 380 KKLHVNGNSIKDVDISDFAEFEGLDLLHLGSNQIAAIKGDVFHNLTNLRRLYLNGNQIER 439
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+YP F L NL L L+ N +K+ F ++ + Q L L+NN + +L A
Sbjct: 440 LYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQL---LYLNNNLLKSLPVYIFSGA 496
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ L+L NN+ +PV+ + SL ++ L+ N D T +L L+L LE
Sbjct: 497 PL--ARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNP---WDCTC--DLVALKLW-LEK 548
Query: 498 NNIAVVVKR----TFIGMPNLQIIDLSFNEI 524
N +VVK T + N+++ L NEI
Sbjct: 549 LNDGIVVKELRCETPVQFANIELKSLK-NEI 578
Score = 152 (58.6 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 47/160 (29%), Positives = 78/160 (48%)
Query: 413 KQTPMNLNLSNN-YITNLYE-NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
K P +L LS N N+ ++ P K L ++ N I++V ++ F + L L+
Sbjct: 349 KTHPSDLGLSVNCQEKNIQSMSELIPKPFNAKKLHVNGNSIKDVDISDFAEF-EGLDLLH 407
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
L N+I + F NL L L L N I + F G+ NLQ + L +N I +
Sbjct: 408 LGSNQIAAIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAG 467
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
F L++L +++N L+SLP +FS + +L++ N+
Sbjct: 468 TFDSMPNLQLLYLNNNLLKSLPVYIFSGAPLARLNLRNNK 507
Score = 145 (56.1 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
KNI++ S N L N S ++ F + L + L +N + I+ D F+N
Sbjct: 364 KNIQSMSELIPKPFNAKKLHVNGNSIKDVDISDFAEFEGLDLLHLGSNQIAAIKGDVFHN 423
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L L + L+ N ++ + F L+N+ + L +N IK I F ++PNL L L +N
Sbjct: 424 LTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNN 483
Query: 398 KLKDFNLNVFSNITSKQTPM-NLNLSNN 424
LK + +FS P+ LNL NN
Sbjct: 484 LLKSLPVYIFSG-----APLARLNLRNN 506
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 42/172 (24%), Positives = 85/172 (49%)
Query: 401 DFNLNV-FSNITSKQTPMNLNLSNNYITNLYENDKKQAP-IYIKSLDLSNNRIQEVPVNF 458
D +++V N+ S + N+ N ++Y ++ + P L+ NN + + N
Sbjct: 19 DSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFYHLNFQNNFLNILYPNT 78
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
F+ ++ L L N++++++ AF L L+ L L +N + ++ TF+G+ NL+ +
Sbjct: 79 FLNFSHAV-SLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQ 137
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+N I + F KL++L ++ N + LP ++F + LDI N+
Sbjct: 138 ADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGNR 189
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 43/172 (25%), Positives = 83/172 (48%)
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343
S ++ ++ Y+N E K+S N + NN+L ++ +TF N +
Sbjct: 31 SCVSVENVLYVNCE--KVSVYRPNQLK-PPWSNFYHLNFQNNFLNILYPNTFLNFSHAVS 87
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N L++I+ +F L+ + + L+ N++K + + F+ + NL L N +K
Sbjct: 88 LQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIE 147
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
F+ + + L L++N I+ L +N + A + LD+ NRIQ++P
Sbjct: 148 RGAFNKLHKLKV---LILNDNLISFLPDNIFRFASL--THLDIRGNRIQKLP 194
Score = 133 (51.9 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 240 LQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN------- 292
L L I +L +S I + N ++++N N S+Y L
Sbjct: 3 LWLFLILSALISSTNADSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFY 62
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++N + N ++ ++ N F N + ++L NN L+ IE F L L + L+ N LK
Sbjct: 63 HLNFQNNFLNILYPNTF-LNFSHAVS-LQLGNNKLQNIEGGAFLGLSALKQLHLNNNELK 120
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F + N+ + +N IKYI AF L L L L DN + N+F
Sbjct: 121 ILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF 175
Score = 103 (41.3 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 36/130 (27%), Positives = 71/130 (54%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ ++ G F L L++L L+ N+L+I L ++ F E L+ L+ ++L E
Sbjct: 93 NKLQNIEGGAFLGLSALKQLHLNNNELKI--LRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH--NNLFHFNIHK 315
+ NK L+ L+ L +++N I + + +++ SL ++++ N+I K+ L H
Sbjct: 151 F--NK-LHKLKVLILNDNLISFLPD-NIFRFASLTHLDIRGNRIQKLPYIGVLEHIG--- 203
Query: 316 RLKEIRLSNN 325
R+ E++L +N
Sbjct: 204 RVVELQLEDN 213
Score = 82 (33.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 35/116 (30%), Positives = 49/116 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L N F + + L L NKLQ IE F L+ L + N+NE
Sbjct: 69 NFLNILYPNTFLNFSHAVSLQLGNNKLQNIE--GGAFLGLSALKQLHL-----NNNELKI 121
Query: 258 YILNK--NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+ + LE+L D N IK I + L L + L N IS + +N+F F
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRF 177
Score = 74 (31.1 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 37/161 (22%), Positives = 74/161 (45%)
Query: 10 LSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDA 69
+SV N+ LY N K+ ++ + +QL+ + S L L + P+ F N
Sbjct: 33 VSVENV--LYVNCEKV-----SVYRPNQLKPPW-SNFYHLNFQNNFLNILYPNTFLNFS- 83
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT- 128
+ ++L++ N +++ + G F + ++Q L L++N+L +L T + + L++L
Sbjct: 84 -HAVSLQLGNNKLQNIEGGAFLGLSALKQ--LHLNNNELKILRADT-FLGIENLEYLQAD 139
Query: 129 -TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
++K E+ K+ LN NL L +I +
Sbjct: 140 YNLIKYIERGAFNKLHKL----KVLILNDNLISFLPDNIFR 176
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 232 (86.7 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 70/255 (27%), Positives = 135/255 (52%)
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+L+ +R++++ L I +++F+ LK L + LS N + +I +F+ +N+L + LS N++
Sbjct: 83 KLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNFRGQDNLLELDLSKNKV 142
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + F +L +L +L+L DN + + V N L+LS N + +L + +
Sbjct: 143 LRMASSTFRHLTDLRRLNLADNSIVEL---VQRNFFMLSRLKYLDLSGNPLQDLQPDVFR 199
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
P +K L N +++++ + L +L L NE K LD F ++ L + L
Sbjct: 200 DVP-ELKVLKCRNCQLKKINPQ-MYNLLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLL 257
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PRD 554
+ N ++VVV + F +L +DLS+N ++ + + F L L++S+N+L L P+
Sbjct: 258 DGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQS 317
Query: 555 VFSNTIIEKLDISYN 569
+ S + + L+IS N
Sbjct: 318 IRSLSNLLTLNISGN 332
Score = 222 (83.2 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 79/328 (24%), Positives = 155/328 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISF-SLFNSNEFP 256
N IT++ N FR NL EL LS NK ++ + S+ F L+ L ++ S+ +
Sbjct: 116 NNITNITENNFRGQDNLLELDLSKNK--VLRMASSTFRHLTDLRRLNLADNSIVELVQRN 173
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+++L++ L++L + N +++++ ++ L + ++ KI+ ++ N+
Sbjct: 174 FFMLSR----LKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMY--NLLPL 227
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L E+ L N + ++ D F ++K L + L N L + F+ ++ ++ LS+N++
Sbjct: 228 LSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLA 287
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ ++F+ L NL LDL NKL L S I S + LN+S N + +L E ++
Sbjct: 288 KVPNDSFLQLTNLTFLDLSYNKL--VRLEPQS-IRSLSNLLTLNISGNVLMDLREM-RET 343
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
+ + L+ + +PV L F LR L + N + + LE L L
Sbjct: 344 FELIPQLTHLAIADMGTMPVGLLHPFKQ-LRYLNISGNSLNNTALEVIDPCRELEFLDLS 402
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
N + + + T + + ++ + L N +
Sbjct: 403 RNQLHGISEDTVLRIQGIRNVRLDNNPL 430
Score = 185 (70.2 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 71/279 (25%), Positives = 133/279 (47%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
LE L + ++N+ I S + L L ++L N I+ I N +F L E+ LS N
Sbjct: 84 LEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITEN--NFRGQDNLLELDLSKNK 141
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
+ + S TF +L +L + L+ N + + +F L+ + + LS N ++ + P+ F ++
Sbjct: 142 VLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDV 201
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
P L L ++ +LK N ++ N+ + L+L N L +++ + K L L
Sbjct: 202 PELKVLKCRNCQLKKINPQMY-NLLPLLS--ELDLGRNEFKFLDKDEFRDVKRLTKVL-L 257
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
N++ V V+ L SL L L +N + + +F L L L L +N + + +
Sbjct: 258 DGNQLSVV-VDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQ 316
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
+ + NL +++S N + L + +F+L I ++H
Sbjct: 317 SIRSLSNLLTLNISGNVLMDL--REMRETFEL-IPQLTH 352
Score = 182 (69.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 62/237 (26%), Positives = 106/237 (44%)
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K L+ + LS N + I + F L + LS N + + +++F++L ++ + L+ N
Sbjct: 106 KYLRILDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNS 165
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
I + F L L LDL N L+D +VF ++ + L N + +
Sbjct: 166 IVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDVPELKV---LKCRNCQLKKINPQMY 222
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
P+ + LDL N + + + + L K+ LD N++ + F L L
Sbjct: 223 NLLPL-LSELDLGRNEFKFLDKDEFRD-VKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLD 280
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L +N +A V +F+ + NL +DLS+N++ L + L LNIS N L L
Sbjct: 281 LSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGNVLMDL 337
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 230 (86.0 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 88/297 (29%), Positives = 151/297 (50%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ N+++ ++ L L ++ L++N IS I N F N +RLKE+ LS+N +
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAF--NGIRRLKELILSSNRISY 123
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++TF + L + LSYN L S+ + F+ L +L++ L N ++ I F + NL
Sbjct: 124 FLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNL 183
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP--IYIKSLDLS 447
LDL N+++ NVF+ + + L+L +N + L + P + +++L L
Sbjct: 184 ELLDLGYNRIRSLARNVFAGMIRLK---ELHLEHNQFSKL---NLALFPRLVSLQNLYLQ 237
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA-TAFGNLDVLELLSLEHNNIAVVVKR 506
N+I + T++ SL++L L NEI+ + F + L+ L+L+ N K
Sbjct: 238 WNKISVIGQTMSWTWS-SLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSN------KL 290
Query: 507 TFIGMPNLQIID--LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTII 561
TFIG +I+D +S N+IS L G + S + L N L+S + + NTII
Sbjct: 291 TFIGQ---EILDSWISLNDIS-LAGNIWECSRNICSLV---NWLKSF-KGLRENTII 339
Score = 225 (84.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 82/289 (28%), Positives = 137/289 (47%)
Query: 245 ISFSL-FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISK 303
+ SL +NS + Y K LN L WL +D+N+I NI + + L + L N+IS
Sbjct: 64 LGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISY 123
Query: 304 IHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
NN F + L+ + LS N L + S+ F L++L ++ L N L++I F++
Sbjct: 124 FLNNTFRPVTN--LRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCR 181
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N+ + L +N+I+ + N F + L +L L+ N+ NL +F + S Q NL L
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQ---NLYLQW 238
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N I+ + + ++ LDLS N I+ + +L++L LD N++ +
Sbjct: 239 NKISVIGQT-MSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEI 297
Query: 484 FGNLDVLELLSLEHN------NIAVVVK--RTFIGMPNLQIIDLSFNEI 524
+ L +SL N NI +V ++F G+ II S E+
Sbjct: 298 LDSWISLNDISLAGNIWECSRNICSLVNWLKSFKGLRENTIICASPKEL 346
Score = 179 (68.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/128 (35%), Positives = 71/128 (55%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N +Q++ N + + L LYLD N I ++D AF + L+ L L N I+
Sbjct: 66 LSLRYNSLQKLKYNQFKGL-NQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYF 124
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IE 562
+ TF + NL+ +DLS+N++ L EQF KL L++ N LR++P +F + +E
Sbjct: 125 LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 563 KLDISYNQ 570
LD+ YN+
Sbjct: 185 LLDLGYNR 192
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 64/259 (24%), Positives = 113/259 (43%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFPYYILNKNLNTLEWLAMDNN 275
LSL +N LQ +L N F +L L + + + N +E + + L+ L + +N
Sbjct: 66 LSLRYNSLQ--KLKYNQFKGLNQLTWLYLDHNHISNIDENAF----NGIRRLKELILSSN 119
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
I N + +T+L ++L YN++ + + F + K L + L +N L I F
Sbjct: 120 RISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFR-GLRKLLS-LHLRSNSLRTIPVRIF 177
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
+ + L + L YN ++S+ F + + + L NQ + F L +L L LQ
Sbjct: 178 QDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQ 237
Query: 396 DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
NK+ + +S Q L+LS N I Q ++ L+L +N++ +
Sbjct: 238 WNKISVIGQTMSWTWSSLQ---RLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIG 294
Query: 456 VNFLQTFADSLRKLYLDFN 474
L ++ SL + L N
Sbjct: 295 QEILDSWI-SLNDISLAGN 312
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 57/234 (24%), Positives = 104/234 (44%)
Query: 147 RCNKITDLNGNLFRHL-QKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG 205
R N + L N F+ L Q + + N+ +N D+ + N+I+
Sbjct: 69 RYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDE--NAFNGIRRLKELILSSNRISYFLN 126
Query: 206 NLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
N FR + NL+ L LS+N+L L S F KL L + + + P I ++
Sbjct: 127 NTFRPVTNLRNLDLSYNQLH--SLGSEQFRGLRKLLSLHLRSNSLRT--IPVRIF-QDCR 181
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
LE L + N I+++ + L ++LE+N+ SK++ LF + L+ + L N
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVS--LQNLYLQWN 239
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVLSFNQIKYI 378
+ +I + L + LS N +++ S F+ + N+ + L N++ +I
Sbjct: 240 KISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFI 293
>UNIPROTKB|P58727 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9685 "Felis
catus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=ISS]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0005622 GO:GO:0042116
InterPro:IPR025875 Pfam:PF12799 GO:GO:0004888 GO:GO:0046696
SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 EMBL:AB060687 RefSeq:NP_001009223.1
ProteinModelPortal:P58727 SMR:P58727 GeneID:493698 KEGG:fca:493698
Uniprot:P58727
Length = 833
Score = 178 (67.7 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 69/275 (25%), Positives = 132/275 (48%)
Query: 210 HLY--NLQEL--SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
HLY L++L +L + +L+++ F ++ L E+ FS +NE L
Sbjct: 317 HLYFKGLKQLPKNLGWQRLELVNCEFEQFPTWKLDPLKELVFS---ANEVRNAFTQVKLE 373
Query: 266 TLEWLAMDNNN--IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
+LE+L + N+ +K+ + T L +++L +N I I +N ++L+ +
Sbjct: 374 SLEFLDLSRNDFSLKSCCSERDLGTTRLKHLDLSFNNIITISSNFLGL---EQLEYLDFQ 430
Query: 324 NNYLELIES-DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY-PN 381
++ L+ + F LK L + +SY + F L ++ + ++ N + + PN
Sbjct: 431 HSSLKQVSDFSVFLPLKNLRYLDISYTHTQVAFHGIFNGLISLQILKMAGNSFQDNFLPN 490
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY- 440
F+ L NL LDL D +L+ + F+++ Q LN+S+N++ +L + P++
Sbjct: 491 IFMELTNLTILDLSDCQLEQVSQVAFNSLPKLQL---LNMSHNHLLSL--DTLPYEPLHS 545
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
+++LD S NRI L+ F +L L L N+
Sbjct: 546 LQTLDCSFNRIVASKEQELRHFPSNLSSLNLTRND 580
Score = 178 (67.7 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 71/266 (26%), Positives = 119/266 (44%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI K++ +S N L + S +F N EL + LS ++ I+ +++ LN++ ++L+
Sbjct: 51 NIPSSTKDLDMSFNPLRNLGSHSFSNFPELQVLDLSRCEIQIIEDDAYQGLNHLSILILT 110
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N I+ ++P AF L +L L + + +L F I +T LN+++N I +
Sbjct: 111 GNPIQRLFPGAFSGLSSLQTLVAVETNIA--SLEDFP-IGHLKTLKELNVAHNLIHSFKL 167
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADS-LRKLYLDF--NEIKHLDATAFGNLD 488
+ ++ LDLSNN+IQ + LQ L L LD N + + AF +
Sbjct: 168 PEYFSNMSNLEYLDLSNNKIQNIYHKDLQVLHQKPLLNLSLDLSLNPLDFIQPGAFKEVK 227
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTG-EQFYFSFKLRILNISHNR 547
+ EL + N V+K + G+ LQI L E +F S + N+ +
Sbjct: 228 LRELTLRSNFNSTDVMKASIQGLAGLQIHQLVLGEFKNERNLGRFDKSILEGLCNLIIEK 287
Query: 548 LRSLPRDVFSNTIIEKLDISYNQDKI 573
R D FS I+ + N I
Sbjct: 288 FRIAYFDKFSEDAIDSFNCLANVSTI 313
Score = 166 (63.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 78/289 (26%), Positives = 134/289 (46%)
Query: 271 AMDNNN-IKNIRNYSLYNL--TSLNYI--NLEYNKISKIHNNLFHFNIHKR--LKEIRLS 323
A+D+ N + N+ SL +L L + NL + ++ ++ F K LKE+ S
Sbjct: 300 AIDSFNCLANVSTISLVHLYFKGLKQLPKNLGWQRLELVNCEFEQFPTWKLDPLKELVFS 359
Query: 324 NNYLELIESDTFYNLKELNTITLSYN--LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
N E+ + T L+ L + LS N LKS + + ++ LSFN I I N
Sbjct: 360 AN--EVRNAFTQVKLESLEFLDLSRNDFSLKSCCSERDLGTTRLKHLDLSFNNIITISSN 417
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F+ L L LD Q + LK ++ FS + L++S + T + + I +
Sbjct: 418 -FLGLEQLEYLDFQHSSLKQ--VSDFSVFLPLKNLRYLDISYTH-TQVAFHGIFNGLISL 473
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKL-YLDFNE--IKHLDATAFGNLDVLELLSLEHN 498
+ L ++ N Q+ NFL L L LD ++ ++ + AF +L L+LL++ HN
Sbjct: 474 QILKMAGNSFQD---NFLPNIFMELTNLTILDLSDCQLEQVSQVAFNSLPKLQLLNMSHN 530
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF-YFSFKLRILNISHN 546
++ + + + +LQ +D SFN I ++ +F L LN++ N
Sbjct: 531 HLLSLDTLPYEPLHSLQTLDCSFNRIVASKEQELRHFPSNLSSLNLTRN 579
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 60/222 (27%), Positives = 112/222 (50%)
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
+S +++ +N + + ++ F N + L+ + LS +++IE D + L L+ + L+
Sbjct: 54 SSTKDLDMSFNPLRNLGSHSFS-NFPE-LQVLDLSRCEIQIIEDDAYQGLNHLSILILTG 111
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNL-NVF 407
N ++ + +F L+++ +V I + +L L +L++ N + F L F
Sbjct: 112 NPIQRLFPGAFSGLSSLQTLVAVETNIASLEDFPIGHLKTLKELNVAHNLIHSFKLPEYF 171
Query: 408 SNITSKQTPMNLNLSNNYITNLYENDKK---QAPIYIKSLDLSNNRIQEVPVNFLQ--TF 462
SN+++ + L+LSNN I N+Y D + Q P+ SLDLS N P++F+Q F
Sbjct: 172 SNMSNLEY---LDLSNNKIQNIYHKDLQVLHQKPLLNLSLDLSLN-----PLDFIQPGAF 223
Query: 463 AD-SLRKLYL--DFNEIKHLDATAFG--NLDVLELLSLEHNN 499
+ LR+L L +FN + A+ G L + +L+ E N
Sbjct: 224 KEVKLRELTLRSNFNSTDVMKASIQGLAGLQIHQLVLGEFKN 265
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 93/400 (23%), Positives = 165/400 (41%)
Query: 203 LNGNLFRHLYN--LQELSLSFNKLQIIELNSNVFDVF-----EKLQLLEISFSLFNSNEF 255
L GN + L+ LS S L +E N + F + L+ L ++ +L +S +
Sbjct: 109 LTGNPIQRLFPGAFSGLS-SLQTLVAVETNIASLEDFPIGHLKTLKELNVAHNLIHSFKL 167
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS---LNY-INLEYNKISKIHNNLFHF 311
P Y N++ LE+L + NN I+NI + L L LN ++L N + I F
Sbjct: 168 PEYF--SNMSNLEYLDLSNNKIQNIYHKDLQVLHQKPLLNLSLDLSLNPLDFIQPGAFK- 224
Query: 312 NIHKRLKEIRLSNNYLEL-IESDTFYNLKELNTITLSYNLLKSIKTTS-FKN--LNNMLN 367
+L+E+ L +N+ + + L L L K+ + F L + N
Sbjct: 225 --EVKLRELTLRSNFNSTDVMKASIQGLAGLQIHQLVLGEFKNERNLGRFDKSILEGLCN 282
Query: 368 IVLSFNQIKYI--YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
+++ +I Y + ++ N + ++ L F + KQ P NL
Sbjct: 283 LIIEKFRIAYFDKFSEDAIDSFNCLA-NVSTISLVHL---YFKGL--KQLPKNLGWQRLE 336
Query: 426 ITNLYENDKKQAPIY----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA 481
+ N + +Q P + +K L S N ++ F Q +SL L L N+
Sbjct: 337 LVNC---EFEQFPTWKLDPLKELVFSANEVRNA---FTQVKLESLEFLDLSRNDFSLKSC 390
Query: 482 TAFGNLDVLEL--LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK-L 538
+ +L L L L NNI + + F+G+ L+ +D + + ++ + K L
Sbjct: 391 CSERDLGTTRLKHLDLSFNNI-ITISSNFLGLEQLEYLDFQHSSLKQVSDFSVFLPLKNL 449
Query: 539 RILNISHNRLRSLPRDVFSNTI-IEKLDISYN--QDKIRP 575
R L+IS+ + +F+ I ++ L ++ N QD P
Sbjct: 450 RYLDISYTHTQVAFHGIFNGLISLQILKMAGNSFQDNFLP 489
Score = 141 (54.7 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 94/395 (23%), Positives = 173/395 (43%)
Query: 202 DLNGNLFRHLYNLQELSLSFNK--LQI-IELNSNVFD-----VFEKLQLLEISF-SLFNS 252
DL+ N +++Y+ ++L + K L + ++L+ N D F++++L E++ S FNS
Sbjct: 181 DLSNNKIQNIYH-KDLQVLHQKPLLNLSLDLSLNPLDFIQPGAFKEVKLRELTLRSNFNS 239
Query: 253 NEFPYYILNKNLNTLEWLAMDN---NNIKNIRNYSLYNLTSLNYI-NLEYNKISKIHNNL 308
+ ++ ++ L L + KN RN ++ + L + NL K + +
Sbjct: 240 TD----VMKASIQGLAGLQIHQLVLGEFKNERNLGRFDKSILEGLCNLIIEKFRIAYFDK 295
Query: 309 FH------FNIHKRLKEIRLSNNYLE-LIESDTFYNLKELNTITLSYNLLKSIKTTSFKN 361
F FN + I L + Y + L + + L + + + K K
Sbjct: 296 FSEDAIDSFNCLANVSTISLVHLYFKGLKQLPKNLGWQRLELVNCEFEQFPTWKLDPLKE 355
Query: 362 LNNMLNIVLSFNQIKYIYPNAF--VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPM-- 417
L V S N+++ NAF V L +L LDL N DF+L + T
Sbjct: 356 L------VFSANEVR----NAFTQVKLESLEFLDLSRN---DFSLKSCCSERDLGTTRLK 402
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
+L+LS N I + N + + LD ++ +++V + +LR L + + +
Sbjct: 403 HLDLSFNNIITISSNFLGLEQL--EYLDFQHSSLKQVSDFSVFLPLKNLRYLDISYTHTQ 460
Query: 478 HLDATAFGNLDVLELLSLEHNNIAV-VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
F L L++L + N+ + F+ + NL I+DLS ++ ++ F
Sbjct: 461 VAFHGIFNGLISLQILKMAGNSFQDNFLPNIFMELTNLTILDLSDCQLEQVSQVAFNSLP 520
Query: 537 KLRILNISHNRLRSLPRDVFSNT-IIEKLDISYNQ 570
KL++LN+SHN L SL + ++ LD S+N+
Sbjct: 521 KLQLLNMSHNHLLSLDTLPYEPLHSLQTLDCSFNR 555
Score = 105 (42.0 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 35/130 (26%), Positives = 67/130 (51%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTT-----ILKGDQLQGIFNSKLRELEITGKDLK 57
LD+S N L L + +SN +LQ L + I++ D QG+ + L L +TG ++
Sbjct: 59 LDMSFNPLRNLGSHS-FSNFPELQVLDLSRCEIQIIEDDAYQGL--NHLSILILTGNPIQ 115
Query: 58 FIDPSAFDNIDACYDLTLKITN-TQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL 116
+ P AF + + L TN +E+ P G ++ +++ L+++HN + +
Sbjct: 116 RLFPGAFSGLSSLQTLVAVETNIASLEDFPIG---HLKTLKE--LNVAHNLIHSFKLPEY 170
Query: 117 YSNVTKLQHL 126
+SN++ L++L
Sbjct: 171 FSNMSNLEYL 180
Score = 78 (32.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 79/361 (21%), Positives = 149/361 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSL--SFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
N + + F+ + L+EL+L +FN +++ + LQ+ ++ F NE
Sbjct: 213 NPLDFIQPGAFKEV-KLRELTLRSNFNSTDVMKAS---IQGLAGLQIHQLVLGEFK-NER 267
Query: 256 PYYILNKN-LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
+K+ L L L ++ I +S + S N + + IS +H +F
Sbjct: 268 NLGRFDKSILEGLCNLIIEKFRIAYFDKFSEDAIDSFNCL-ANVSTISLVH---LYFKGL 323
Query: 315 KRLKEIRLSNNYLELI--ESDTF--YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
K+L + L LEL+ E + F + L L + S N +++ T K L ++ + L
Sbjct: 324 KQLPK-NLGWQRLELVNCEFEQFPTWKLDPLKELVFSANEVRNA-FTQVK-LESLEFLDL 380
Query: 371 SFNQ--IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITN 428
S N +K + L LDL N + + + SN + L+ ++ +
Sbjct: 381 SRNDFSLKSCCSERDLGTTRLKHLDLSFNNI----ITISSNFLGLEQLEYLDFQHSSLKQ 436
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK-HLDATAFGNL 487
+ + ++ LD+S Q V + + SL+ L + N + + F L
Sbjct: 437 VSDFSVFLPLKNLRYLDISYTHTQ-VAFHGIFNGLISLQILKMAGNSFQDNFLPNIFMEL 495
Query: 488 DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR 547
L +L L + V + F +P LQ++++S N + L + L+ L+ S NR
Sbjct: 496 TNLTILDLSDCQLEQVSQVAFNSLPKLQLLNMSHNHLLSLDTLPYEPLHSLQTLDCSFNR 555
Query: 548 L 548
+
Sbjct: 556 I 556
Score = 68 (29.0 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLR----------ELEIT 52
L+++HN + + +SN++ L++L L +++Q I++ L+ L+++
Sbjct: 155 LNVAHNLIHSFKLPEYFSNMSNLEYLD---LSNNKIQNIYHKDLQVLHQKPLLNLSLDLS 211
Query: 53 GKDLKFIDPSAFDNIDACYDLTLK 76
L FI P AF + +LTL+
Sbjct: 212 LNPLDFIQPGAFKEVKL-RELTLR 234
Score = 38 (18.4 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 91 DKIENIEQMTLDLSHNKLSVLNMA 114
+KI+NI L + H K +LN++
Sbjct: 185 NKIQNIYHKDLQVLHQK-PLLNLS 207
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 186 (70.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 84/301 (27%), Positives = 130/301 (43%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L ++NN + ++ L L IN NKI+ I F + EI L++N LE
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAG--VNEILLTSNRLE 595
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
++ F L+ L T+ L N + + SF L+++ + L NQI I P AF L +
Sbjct: 596 NVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHS 655
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L L+L N FN N + + +T N + Q P ++K + + +
Sbjct: 656 LSTLNLLANP---FNCNCYLAWLGEWLR-----KKRIVTG---NPRCQKPYFLKEIPIQD 704
Query: 449 NRIQEV------------PVNFLQTFADSLRKLYLDFNEIKHLDATAFG-NLDVLELLSL 495
IQ+ P++ T L + N K L G DV EL L
Sbjct: 705 VAIQDFTCDDGNDDSSCSPLSRCPTECTCLDTVVRCSN--KGLKVLPKGIPRDVTELY-L 761
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
+ N+ +V K + +L +IDLS N IS L+ + F +L L +S+NRLR +P
Sbjct: 762 DGNHFTLVPKELY-NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRT 820
Query: 556 F 556
F
Sbjct: 821 F 821
Score = 173 (66.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 76/299 (25%), Positives = 137/299 (45%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
NT E L ++ NNI I L L + L NKIS I F ++ K L+ +RL+
Sbjct: 56 NT-ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQ-DL-KELERLRLNR 112
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N+L+L F +L + LS N +++I +F+ ++ N+ L +NQI I AF
Sbjct: 113 NHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFR 172
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT-NL-YEND-KKQAP--- 438
L +L L L +N + ++ F+++ +T L+ +N Y +L + +D +Q P
Sbjct: 173 ALRDLEVLTLNNNNITRLSVASFNHMPKLRT-FRLHSNNLYCDCHLAWLSDWLRQRPRVG 231
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN-EIKHLDATAFGNLDVLELLSLEH 497
+Y + + S+ R V + F S + ++ + + H A + ++++
Sbjct: 232 LYTQCMGPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGL 291
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
I + T + I L N I ++ F KLR +++S+N++ L D F
Sbjct: 292 TEIPTNLPET------ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAF 344
Score = 166 (63.5 bits), Expect = 7.2e-16, Sum P(3) = 7.2e-16
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 274 NNNIKNIRNYSLYNL-TSL----NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + T+L I LE N I I F + +K+L+ I LSNN +
Sbjct: 280 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAF--SPYKKLRRIDLSNNQIS 337
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ D F L+ LN++ L N + + + F+ L ++ ++L+ N+I + +AF +L N
Sbjct: 338 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 397
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
L L L DNKL+ FS + + QT M+L N +I + +
Sbjct: 398 LNLLSLYDNKLQTIAKGTFSPLRAIQT-MHL-AQNPFICDCH 437
Score = 147 (56.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 88/343 (25%), Positives = 146/343 (42%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N+ ++E +F+KL QL +I+FS + E L + +
Sbjct: 537 ELRLNNNEFTVLEATG----IFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEIL-LTS 591
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N ++N+++ L SL + L N+IS + N+ F RL + L +N + I
Sbjct: 592 NRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRL--LSLYDNQIATIAPGA 649
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP-NAFVNLPNLVK-L 392
F L L+T+ NLL + F N N L + + + K I N P +K +
Sbjct: 650 FDTLHSLSTL----NLLAN----PF-NCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEI 700
Query: 393 DLQDNKLKDFNLNVFSNITS----KQTPMNLNLSNNYITNLYENDK---KQAPIYIKSLD 445
+QD ++DF + ++ +S + P + + + K K P + L
Sbjct: 701 PIQDVAIQDFTCDDGNDDSSCSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELY 760
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N VP L + L + L N I L +F N+ L L L +N + +
Sbjct: 761 LDGNHFTLVPKE-LYNYKH-LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 818
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
RTF G+ +L+++ L N+IS++ F L L I N L
Sbjct: 819 RTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPL 861
Score = 135 (52.6 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 297 EYNKISKIHNNLFHF----NIHKRLKEIR---LSNNYLELIESDTFYNLKELNTITLSYN 349
+Y +++NN F I K+L ++R SNN + IE F +N I L+ N
Sbjct: 533 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSN 592
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L++++ FK L ++ ++L N+I + ++F+ L ++ L L DN++ F
Sbjct: 593 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDT 652
Query: 410 ITSKQTPMNLNLSNNYITNLY 430
+ S T +NL L+N + N Y
Sbjct: 653 LHSLST-LNL-LANPFNCNCY 671
Score = 128 (50.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 38/133 (28%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P I + L N I+ +P + LR++ L N+I L AF L L L L
Sbjct: 299 PETITEIRLEQNSIKVIPPGAFSPYK-KLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 357
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + K F G+ +LQ++ L+ N+I+ L + F L +L++ N+L+++ + FS
Sbjct: 358 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 417
Query: 558 NT-IIEKLDISYN 569
I+ + ++ N
Sbjct: 418 PLRAIQTMHLAQN 430
Score = 120 (47.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L+ N + + L+++ K L I LSNN + + + +F N+ +L T+ LSYN L+ I
Sbjct: 761 LDGNHFTLVPKELYNY---KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 817
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVFSN 409
+F L ++ + L N I + AF +L L L + N L D N+ S+
Sbjct: 818 PRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSD 872
Score = 118 (46.6 bits), Expect = 7.2e-16, Sum P(3) = 7.2e-16
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 414 QTPMNLNLSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
Q L L+NN T L K+ P ++ ++ SNN+I ++ + A + ++ L
Sbjct: 533 QYTAELRLNNNEFTVLEATGIFKKLP-QLRKINFSNNKITDIEEGAFEGAA-GVNEILLT 590
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++++ F L+ L+ L L N I+ V +FIG+ +++++ L N+I+ + F
Sbjct: 591 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAF 650
Query: 533 YFSFKLRILNISHN 546
L LN+ N
Sbjct: 651 DTLHSLSTLNLLAN 664
Score = 115 (45.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 42/168 (25%), Positives = 80/168 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
+I + + + L+ N + I F L+ L + L N + +I+ +F++L + + L+
Sbjct: 52 SIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLN 111
Query: 372 FNQIKYIYPNA-FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
N ++ ++P F+ L +LDL +N+++ F + NL L N I+ +
Sbjct: 112 RNHLQ-LFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIK---NLQLDYNQISCI- 166
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPV-NF-----LQTFADSLRKLYLD 472
E+ +A ++ L L+NN I + V +F L+TF LY D
Sbjct: 167 EDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 214
Score = 112 (44.5 bits), Expect = 9.3e-08, Sum P(3) = 9.3e-08
Identities = 84/351 (23%), Positives = 139/351 (39%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
K + + +NN + D + NKIT+L +LF L++LQ L L+ NK
Sbjct: 324 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 383
Query: 224 LQIIEL-------NSNVFDVFE-KLQLL-EISFSLFNSNEFPYYILNKNLNT--LEWLAM 272
+ + + N N+ +++ KLQ + + +FS + + + N + L+WLA
Sbjct: 384 INCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLA- 442
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
D + I S TS L +I +I + F + K I + +Y +
Sbjct: 443 DYLHTNPIET-SGARCTSPR--RLANKRIGQIKSKKFRCSA-KEQYFIPGTEDYRSKLSG 498
Query: 333 DTFYNLKELNTITLSYNLL--KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA---FVNLP 387
D F +L + + K T + L N ++ A F LP
Sbjct: 499 DCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLP 558
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
L K++ +NK+ D F + L++N + N+ K +K+L L
Sbjct: 559 QLRKINFSNNKITDIEEGAFEGAAGVN---EILLTSNRLENVQHKMFKGLES-LKTLMLR 614
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+NRI V N S+R L L N+I + AF L L L+L N
Sbjct: 615 SNRISCVG-NDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLAN 664
Score = 104 (41.7 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 35/139 (25%), Positives = 65/139 (46%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
++ SN +T + ++ P Y L L+NN + + LRK+ N+I
Sbjct: 517 VDCSNQKLTKIPDH----IPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD 572
Query: 479 LDATAF-GNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
++ AF G V E+L L N + V + F G+ +L+ + L N IS + + F
Sbjct: 573 IEEGAFEGAAGVNEIL-LTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSS 631
Query: 538 LRILNISHNRLRSLPRDVF 556
+R+L++ N++ ++ F
Sbjct: 632 VRLLSLYDNQIATIAPGAF 650
Score = 95 (38.5 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+LYLD N + + N L L+ L +N I+ + ++F M L + LS+N + +
Sbjct: 758 ELYLDGNHFTLVPKELY-NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCI 816
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
F LR+L++ N + +P FS+ + + L I N
Sbjct: 817 PPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGAN 859
Score = 90 (36.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 46/186 (24%), Positives = 83/186 (44%)
Query: 148 CNKIT-DLNGNLFRHLQKSIVKAKKN---NNNNEDQVSDREKXXXXXXXXXXRC-NKITD 202
C+ T D +G R + +SI + + N NN +++ + NKI+
Sbjct: 34 CSGSTVDCHGLALRSVPRSIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKIST 93
Query: 203 LNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILN 261
+ F+ L L+ L L+ N LQ+ EL +F KL L++S + + P
Sbjct: 94 IERGAFQDLKELERLRLNRNHLQLFPEL---LFLGTSKLYRLDLSENQIQA--IPRKAFR 148
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
++ ++ L +D N I I + + L L + L N I+++ ++ FN +L+ R
Sbjct: 149 GAVD-IKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRL--SVASFNHMPKLRTFR 205
Query: 322 LSNNYL 327
L +N L
Sbjct: 206 LHSNNL 211
Score = 78 (32.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 40 GIFN--SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F+ KLR ++++ + + P AF + + L L +I ELP LF+ + +++
Sbjct: 318 GAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY--GNKITELPKSLFEGLFSLQ 375
Query: 98 QMTLDLSH-NKLSV--------LNMATLYSNVTKLQ 124
+ L+ + N L V LN+ +LY N KLQ
Sbjct: 376 LLLLNANKINCLRVDAFQDLHNLNLLSLYDN--KLQ 409
Score = 52 (23.4 bits), Expect = 7.2e-16, Sum P(3) = 7.2e-16
Identities = 26/130 (20%), Positives = 56/130 (43%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L++ G ++ I + F + + L++ +I + G F ++ +E++ L+ +H +L
Sbjct: 60 LDLNGNNITRITKTDFAGLR--HLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQL 117
Query: 109 --SVLNMAT--LYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQK 164
+L + T LY + ++ I + + N+I+ + FR L+
Sbjct: 118 FPELLFLGTSKLY-RLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRD 176
Query: 165 SIVKAKKNNN 174
V NNN
Sbjct: 177 LEVLTLNNNN 186
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 231 (86.4 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 72/230 (31%), Positives = 115/230 (50%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
Y+NL+ N I I + F H L+ ++LS N + IE F L LNT+ L N L
Sbjct: 92 YLNLQENSIQVIRTDTFKHLRH--LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT 149
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ T +F+ L+ + + L N I+ I AF +P+L +LDL +LK L S
Sbjct: 150 TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL--GELK--RLEYISEAAF 205
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
+ +NL N + NL + A + ++ L+LS NR+ + Q SLRKL+L
Sbjct: 206 EGL-VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLT-SLRKLWLM 263
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
++ ++ AF +L LE L+L HNN+ + F + L+ + L+ N
Sbjct: 264 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 65/234 (27%), Positives = 118/234 (50%)
Query: 341 LNT--ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+NT + L N ++ I+T +FK+L ++ + LS N ++ I AF LP+L L+L DN+
Sbjct: 88 VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNR 147
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVN 457
L F ++ + L L NN I ++ + P ++ LDL R++ +
Sbjct: 148 LTTVPTQAFEYLSKLR---ELWLRNNPIESIPSYAFNRVPS-LRRLDLGELKRLEYISEA 203
Query: 458 FLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
+ + LR L L +K + + TA L+ LEL N + ++ +F G+ +L+
Sbjct: 204 AFEGLVN-LRYLNLGMCNLKDIPNLTALVRLEELELSG---NRLDLIRPGSFQGLTSLRK 259
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ L +++ + F L LN+SHN L SLP D+F+ +E++ +++N
Sbjct: 260 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 175 (66.7 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 54/227 (23%), Positives = 109/227 (48%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N +++I +DTF +L+ L + LS NL++ I+ +F L ++ + L N++ +
Sbjct: 93 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 152
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
AF L L +L L++N ++ F+ + S + L+L + +
Sbjct: 153 TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLR---RLDLGELKRLEYISEAAFEGLV 209
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ L+L ++++P N T L +L L N + + +F L L L L H
Sbjct: 210 NLRYLNLGMCNLKDIP-NL--TALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 266
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
+A + + F + +L+ ++LS N + L + F +L ++++HN
Sbjct: 267 VATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 158 (60.7 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 62/213 (29%), Positives = 105/213 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N I + + F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 98 NSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFE 157
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++ I F ++
Sbjct: 158 Y--LSK-LREL-WLR--NNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 211
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L+ I + T L L + LS N L I+ SF+ L ++ + L Q+
Sbjct: 212 RYLNLGMCN--LKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 267
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
I NAF +L +L +L+L N L ++F+
Sbjct: 268 ATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT 300
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
+NT +L + N+I+ IR + +L L + L N + KI F N L + L
Sbjct: 88 VNT-RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAF--NGLPSLNTLELF 144
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS-FNQIKYIYPNA 382
+N L + + F L +L + L N ++SI + +F + ++ + L +++YI A
Sbjct: 145 DNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAA 204
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F L NL L+L LKD N+T+ L LS N + +L Q ++
Sbjct: 205 FEGLVNLRYLNLGMCNLKDI-----PNLTALVRLEELELSGNRL-DLIRPGSFQGLTSLR 258
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
L L + ++ + N SL +L L N + L F L LE + L HN
Sbjct: 259 KLWLMHAQVATIERNAFDDLK-SLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 148 (57.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 62/236 (26%), Positives = 107/236 (45%)
Query: 240 LQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
L L E S + ++ F K+L LE L + N ++ I + L SLN + L N
Sbjct: 93 LNLQENSIQVIRTDTF------KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDN 146
Query: 300 KISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTS 358
+++ + F + +L+E+ L NN +E I S F + L + L L+ I +
Sbjct: 147 RLTTVPTQAFEYL--SKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAA 204
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
F+ L N+ + L +K I PN L L +L+L N+L F +TS +
Sbjct: 205 FEGLVNLRYLNLGMCNLKDI-PN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLR---K 259
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
L L + + + N ++ L+LS+N + +P + L T L +++L+ N
Sbjct: 260 LWLMHAQVATIERNAFDDLKS-LEELNLSHNNLMSLPHD-LFTPLHRLERVHLNHN 313
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 59/218 (27%), Positives = 99/218 (45%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N + L+L N +Q+I ++ F L++L++S +L E + +LNTLE +
Sbjct: 89 NTRYLNLQENSIQVIR--TDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLE---L 143
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN-NYLELIE 331
+N + + + L+ L + L N I I + + FN L+ + L LE I
Sbjct: 144 FDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS--YAFNRVPSLRRLDLGELKRLEYIS 201
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
F L L + L LK I + L + + LS N++ I P +F L +L K
Sbjct: 202 EAAFEGLVNLRYLNLGMCNLKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLTSLRK 259
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L L ++ N F ++ S + LNLS+N + +L
Sbjct: 260 LWLMHAQVATIERNAFDDLKSLE---ELNLSHNNLMSL 294
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 231 (86.4 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 72/230 (31%), Positives = 115/230 (50%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
Y+NL+ N I I + F H L+ ++LS N + IE F L LNT+ L N L
Sbjct: 92 YLNLQENSIQVIRTDTFKHLRH--LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT 149
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ T +F+ L+ + + L N I+ I AF +P+L +LDL +LK L S
Sbjct: 150 TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL--GELK--RLEYISEAAF 205
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
+ +NL N + NL + A + ++ L+LS NR+ + Q SLRKL+L
Sbjct: 206 EGL-VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLT-SLRKLWLM 263
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
++ ++ AF +L LE L+L HNN+ + F + L+ + L+ N
Sbjct: 264 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 65/234 (27%), Positives = 118/234 (50%)
Query: 341 LNT--ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+NT + L N ++ I+T +FK+L ++ + LS N ++ I AF LP+L L+L DN+
Sbjct: 88 VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNR 147
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVN 457
L F ++ + L L NN I ++ + P ++ LDL R++ +
Sbjct: 148 LTTVPTQAFEYLSKLR---ELWLRNNPIESIPSYAFNRVPS-LRRLDLGELKRLEYISEA 203
Query: 458 FLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
+ + LR L L +K + + TA L+ LEL N + ++ +F G+ +L+
Sbjct: 204 AFEGLVN-LRYLNLGMCNLKDIPNLTALVRLEELELSG---NRLDLIRPGSFQGLTSLRK 259
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ L +++ + F L LN+SHN L SLP D+F+ +E++ +++N
Sbjct: 260 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 175 (66.7 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 54/227 (23%), Positives = 109/227 (48%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N +++I +DTF +L+ L + LS NL++ I+ +F L ++ + L N++ +
Sbjct: 93 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 152
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
AF L L +L L++N ++ F+ + S + L+L + +
Sbjct: 153 TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLR---RLDLGELKRLEYISEAAFEGLV 209
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ L+L ++++P N T L +L L N + + +F L L L L H
Sbjct: 210 NLRYLNLGMCNLKDIP-NL--TALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 266
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
+A + + F + +L+ ++LS N + L + F +L ++++HN
Sbjct: 267 VATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 158 (60.7 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 62/213 (29%), Positives = 105/213 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N I + + F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 98 NSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFE 157
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++ I F ++
Sbjct: 158 Y--LSK-LREL-WLR--NNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 211
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L+ I + T L L + LS N L I+ SF+ L ++ + L Q+
Sbjct: 212 RYLNLGMCN--LKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 267
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
I NAF +L +L +L+L N L ++F+
Sbjct: 268 ATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT 300
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
+NT +L + N+I+ IR + +L L + L N + KI F N L + L
Sbjct: 88 VNT-RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAF--NGLPSLNTLELF 144
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS-FNQIKYIYPNA 382
+N L + + F L +L + L N ++SI + +F + ++ + L +++YI A
Sbjct: 145 DNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAA 204
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F L NL L+L LKD N+T+ L LS N + +L Q ++
Sbjct: 205 FEGLVNLRYLNLGMCNLKDI-----PNLTALVRLEELELSGNRL-DLIRPGSFQGLTSLR 258
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
L L + ++ + N SL +L L N + L F L LE + L HN
Sbjct: 259 KLWLMHAQVATIERNAFDDLK-SLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 148 (57.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 62/236 (26%), Positives = 107/236 (45%)
Query: 240 LQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
L L E S + ++ F K+L LE L + N ++ I + L SLN + L N
Sbjct: 93 LNLQENSIQVIRTDTF------KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDN 146
Query: 300 KISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTS 358
+++ + F + +L+E+ L NN +E I S F + L + L L+ I +
Sbjct: 147 RLTTVPTQAFEYL--SKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAA 204
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
F+ L N+ + L +K I PN L L +L+L N+L F +TS +
Sbjct: 205 FEGLVNLRYLNLGMCNLKDI-PN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLR---K 259
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
L L + + + N ++ L+LS+N + +P + L T L +++L+ N
Sbjct: 260 LWLMHAQVATIERNAFDDLKS-LEELNLSHNNLMSLPHD-LFTPLHRLERVHLNHN 313
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 59/218 (27%), Positives = 99/218 (45%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N + L+L N +Q+I ++ F L++L++S +L E + +LNTLE +
Sbjct: 89 NTRYLNLQENSIQVIR--TDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLE---L 143
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN-NYLELIE 331
+N + + + L+ L + L N I I + + FN L+ + L LE I
Sbjct: 144 FDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS--YAFNRVPSLRRLDLGELKRLEYIS 201
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
F L L + L LK I + L + + LS N++ I P +F L +L K
Sbjct: 202 EAAFEGLVNLRYLNLGMCNLKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLTSLRK 259
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L L ++ N F ++ S + LNLS+N + +L
Sbjct: 260 LWLMHAQVATIERNAFDDLKSLE---ELNLSHNNLMSL 294
>UNIPROTKB|Q6UXK5 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CleanEx:HS_LRRN1 CTD:57633 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE OrthoDB:EOG4XKV6G EMBL:AB074161
EMBL:AB040930 EMBL:AY358312 EMBL:BC034947 EMBL:AK023273
IPI:IPI00021485 RefSeq:NP_065924.3 UniGene:Hs.163244
ProteinModelPortal:Q6UXK5 SMR:Q6UXK5 STRING:Q6UXK5
PhosphoSite:Q6UXK5 DMDM:60390188 PaxDb:Q6UXK5 PRIDE:Q6UXK5
DNASU:57633 Ensembl:ENST00000319331 GeneID:57633 KEGG:hsa:57633
UCSC:uc003bpt.4 GeneCards:GC03P003816 HGNC:HGNC:20980 HPA:HPA011071
neXtProt:NX_Q6UXK5 PharmGKB:PA134935557 InParanoid:Q6UXK5
GenomeRNAi:57633 NextBio:64341 Bgee:Q6UXK5 Genevestigator:Q6UXK5
GermOnline:ENSG00000175928 Uniprot:Q6UXK5
Length = 716
Score = 231 (86.4 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 84/307 (27%), Positives = 147/307 (47%)
Query: 225 QIIELNSN-VFDVFEKLQ----LLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKN 279
Q++ L SN + ++LQ L E+ FS N L NL L L ++ N I
Sbjct: 75 QVLLLQSNNIAKTVDELQQLFNLTELDFSQNNFTNIKEVGL-ANLTQLTTLHLEENQITE 133
Query: 280 IRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLK 339
+ +Y L +L++L + + +N+IS I + F + K L + L++N L++I+S F +
Sbjct: 134 MTDYCLQDLSNLQELYINHNQISTISAHAFA-GL-KNLLRLHLNSNKLKVIDSRWFDSTP 191
Query: 340 ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
L + + N + I +FK L N+ ++VL+ + I NA V L +L L DNKL
Sbjct: 192 NLEILMIGENPVIGILDMNFKPLANLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKL 251
Query: 400 KDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNF 458
+ + + L+L+ N I + E D K + +K L ++N + V
Sbjct: 252 VKVPQLALQKVPNLKF---LDLNKNPIHKIQEGDFKNM-LRLKELGINNMGELVSVDRYA 307
Query: 459 LQTFADSLRKLYLDFN-EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
L + L KL N ++ ++ AF ++ LE L L +N + + ++T +PNL+ I
Sbjct: 308 LDNLPE-LTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAIYQKTVESLPNLREI 366
Query: 518 DLSFNEI 524
+ N +
Sbjct: 367 SIHSNPL 373
Score = 176 (67.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 72/269 (26%), Positives = 124/269 (46%)
Query: 268 EWLAMDNNNIKNIRNYSLYNLTS-LNYINLEYNKISKIHNNLFH-FNIHKRLKEIRLSNN 325
E +D N+++ R S NL+S + L+ N I+K + L FN L E+ S N
Sbjct: 52 EATTVDCNDLRLTRIPS--NLSSDTQVLLLQSNNIAKTVDELQQLFN----LTELDFSQN 105
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
I+ NL +L T+ L N + + ++L+N+ + ++ NQI I +AF
Sbjct: 106 NFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYINHNQISTISAHAFAG 165
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSL 444
L NL++L L NKLK + F + + + M + N + + + + K P+ ++SL
Sbjct: 166 LKNLLRLHLNSNKLKVIDSRWFDSTPNLEILM---IGENPVIGILDMNFK--PLANLRSL 220
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
L+ + ++P N L DSL L N++ + A + L+ L L N I +
Sbjct: 221 VLAGMYLTDIPGNALVGL-DSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQ 279
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
+ F M L++ +L N + L Y
Sbjct: 280 EGDFKNM--LRLKELGINNMGELVSVDRY 306
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 323 SNNYLELI-ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
SNN + + E +NL EL+ S N +IK NL + + L NQI +
Sbjct: 81 SNNIAKTVDELQQLFNLTELD---FSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDY 137
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
+L NL +L + N++ + + F+ + + + L+L++N + + P +
Sbjct: 138 CLQDLSNLQELYINHNQISTISAHAFAGLKNL---LRLHLNSNKLKVIDSRWFDSTP-NL 193
Query: 442 KSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
+ L + N + + +NF + A+ LR L L + + A LD LE LS N +
Sbjct: 194 EILMIGENPVIGILDMNF-KPLAN-LRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKL 251
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH-NRLRSLPRDVFSNT 559
V + +PNL+ +DL+ N I + F +L+ L I++ L S+ R N
Sbjct: 252 VKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNL 311
Query: 560 I-IEKLDISYN 569
+ KL+ + N
Sbjct: 312 PELTKLEATNN 322
Score = 150 (57.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 55/207 (26%), Positives = 105/207 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNK-LQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
NK+ ++ F NL+ L + N + I+++N F L+ L ++ ++ + + P
Sbjct: 177 NKLKVIDSRWFDSTPNLEILMIGENPVIGILDMN---FKPLANLRSLVLA-GMYLT-DIP 231
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L L++LE L+ +N + + +L + +L +++L N I KI F N+ R
Sbjct: 232 GNAL-VGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFK-NM-LR 288
Query: 317 LKEIRLSNNYLELIESDTFY--NLKELNTITLSYN-LLKSIKTTSFKNLNNMLNIVLSFN 373
LKE+ + NN EL+ D + NL EL + + N L I +F+++ + +++L+ N
Sbjct: 289 LKELGI-NNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNN 347
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLK 400
+ IY +LPNL ++ + N L+
Sbjct: 348 ALNAIYQKTVESLPNLREISIHSNPLR 374
Score = 132 (51.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 58/209 (27%), Positives = 99/209 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I+ ++ + F L NL L L+ NKL++I+ S FD L++L I E P
Sbjct: 153 NQISTISAHAFAGLKNLLRLHLNSNKLKVID--SRWFDSTPNLEILMIG-------ENPV 203
Query: 258 Y-ILNKN---LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNI 313
IL+ N L L L + + +I +L L SL ++ NK+ K+ +
Sbjct: 204 IGILDMNFKPLANLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQ-KV 262
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNL--LKSIKTTSFKNLNNMLNIVLS 371
LK + L+ N + I+ F N+ L + ++ N+ L S+ + NL + + +
Sbjct: 263 -PNLKFLDLNKNPIHKIQEGDFKNMLRLKELGIN-NMGELVSVDRYALDNLPELTKLEAT 320
Query: 372 FN-QIKYIYPNAFVNLPNLVKLDLQDNKL 399
N ++ YI+ AF ++P L L L +N L
Sbjct: 321 NNPKLSYIHRLAFRSVPALESLMLNNNAL 349
Score = 131 (51.2 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 51/192 (26%), Positives = 89/192 (46%)
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL---NLSNNYITNLYENDKKQAPIYIK 442
+P+ + D Q L+ N N+ + Q NL + S N TN+ E +
Sbjct: 66 IPSNLSSDTQVLLLQS-N-NIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLT-QLT 122
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+L L N+I E+ LQ ++ L++LY++ N+I + A AF L L L L N + V
Sbjct: 123 TLHLEENQITEMTDYCLQDLSN-LQELYINHNQISTISAHAFAGLKNLLRLHLNSNKLKV 181
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
+ R F PNL+I+ + N + + F LR L ++ L +P + ++
Sbjct: 182 IDSRWFDSTPNLEILMIGENPVIGILDMNFKPLANLRSLVLAGMYLTDIPGNALVG--LD 239
Query: 563 KLD-ISYNQDKI 573
L+ +S+ +K+
Sbjct: 240 SLESLSFYDNKL 251
>MGI|MGI:2156367 [details] [associations]
symbol:Tlr3 "toll-like receptor 3" species:10090 "Mus
musculus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0002224 "toll-like receptor
signaling pathway" evidence=ISO] [GO:0002282 "microglial cell
activation involved in immune response" evidence=ISO] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006952 "defense
response" evidence=IMP] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=ISO] [GO:0009615
"response to virus" evidence=IMP] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032481 "positive
regulation of type I interferon production" evidence=IDA]
[GO:0032722 "positive regulation of chemokine production"
evidence=ISO] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IDA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISO;IMP;IDA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=ISO] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IDA;IMP] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=ISO]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IDA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=ISO] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IGI;IDA;IMP]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP] [GO:0043331
"response to dsRNA" evidence=ISO] [GO:0045078 "positive regulation
of interferon-gamma biosynthetic process" evidence=ISO] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IMP] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=ISO] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP] [GO:0051607
"defense response to virus" evidence=IGI;TAS] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=ISO] [GO:0071360
"cellular response to exogenous dsRNA" evidence=ISO] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027173
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
MGI:MGI:2156367 GO:GO:0016021 GO:GO:0009986 GO:GO:0005789
GO:GO:0043123 GO:GO:0006954 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0004872
GO:GO:0051607 GO:GO:0010008 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 GO:GO:0003725 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 GO:GO:0001934 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0002224
GO:GO:0052033 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0002282 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0071360 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 HOGENOM:HOG000251618 OMA:IANINDD
GO:GO:0045356 GO:GO:0034346 EMBL:AF420279 EMBL:AF355152
EMBL:AK083977 IPI:IPI00320618 RefSeq:NP_569054.2 UniGene:Mm.33874
PDB:3CIG PDB:3CIY PDBsum:3CIG PDBsum:3CIY ProteinModelPortal:Q99MB1
SMR:Q99MB1 STRING:Q99MB1 PhosphoSite:Q99MB1 PaxDb:Q99MB1
PRIDE:Q99MB1 Ensembl:ENSMUST00000034056 Ensembl:ENSMUST00000167106
GeneID:142980 KEGG:mmu:142980 UCSC:uc009loy.1 eggNOG:NOG265249
InParanoid:Q99MB1 EvolutionaryTrace:Q99MB1 NextBio:370067
Bgee:Q99MB1 CleanEx:MM_TLR3 Genevestigator:Q99MB1
GermOnline:ENSMUSG00000031639 Uniprot:Q99MB1
Length = 905
Score = 232 (86.7 bits), Expect = 8.5e-16, P = 8.5e-16
Identities = 141/598 (23%), Positives = 251/598 (41%)
Query: 3 LDLSHNKLSVLN--MATLYS--NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKF 58
LD N +S L + + V LQH + + DQ +F + L EL++ +
Sbjct: 81 LDAGFNSISKLEPELCQILPLLKVLNLQHNELSQIS-DQTF-VFCTNLTELDLMSNSIHK 138
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
I + F N L L +L +G+ ++EN++++ L + NK+ L
Sbjct: 139 IKSNPFKNQKNLIKLDLSHNGLSSTKLGTGV--QLENLQELLL--AKNKILALRSE---- 190
Query: 119 NVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNED 178
+L+ LG + L+ + C + G LF L + A+ N + E
Sbjct: 191 ---ELEFLGNSSLRKLDLSSNPLKEFSPGCFQTI---GKLFALLLNN---AQLNPHLTEK 241
Query: 179 QVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLY--NLQELSLSFNKLQIIELNSNVFDV 236
+ N++ + + F L NL +L LS+N L ++ + F
Sbjct: 242 LCWELSNTSIQNLSLAN--NQLLATSESTFSGLKWTNLTQLDLSYNNLH--DVGNGSFSY 297
Query: 237 FEKLQLLEISFS-LFNSNEFPYYILNKNLNTLEWL-AMDNNNIK-----NIRNYSLYNLT 289
L+ L + ++ + + +Y L+ NL L A ++ NI ++S L
Sbjct: 298 LPSLRYLSLEYNNIQRLSPRSFYGLS-NLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLK 356
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY--LELIESDTFYNLKE--LNTIT 345
L Y+N++ N I +N F + LK + LS + L+ + ++TF +L L T+
Sbjct: 357 YLEYLNMDDNNIPSTKSNTFTGLVS--LKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLN 414
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY-IYPNAFVNLPNLVKLDLQDNKLKDFNL 404
L+ N + I +F L + + L N+I+ + + L N+ ++ L NK +
Sbjct: 415 LTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLST 474
Query: 405 NVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFA 463
+ F+ + S Q L L + N+ + P+ + LDLSNN I + + L+
Sbjct: 475 SSFALVPSLQ---RLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGL- 530
Query: 464 DSLRKLYLDFNEIKHL--DATAFG------NLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
++L L N + L A G L L +L+LE N + + F + L+
Sbjct: 531 ENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIPVGVFKNLFELK 590
Query: 516 IIDLSFNEISMLTGEQFYFSFK--LRILNISHNRLRSLPRDVFSNTI--IEKLDISYN 569
I+L N ++ L E F F + LR LN+ N + S+ +DVF + LD+ +N
Sbjct: 591 SINLGLNNLNKL--EPFIFDDQTSLRSLNLQKNLITSVEKDVFGPPFQNLNSLDMRFN 646
Score = 204 (76.9 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 79/323 (24%), Positives = 137/323 (42%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + +N ++ + + + L ++ +N ISK+ L I LK + L +N L
Sbjct: 57 LNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQ--ILPLLKVLNLQHNELSQ 114
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
I TF L + L N + IK+ FKN N++ + LS N + V L NL
Sbjct: 115 ISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENL 174
Query: 390 VKLDLQDNK---LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
+L L NK L+ L N + ++ ++ N + ++ K + + + L
Sbjct: 175 QELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQL 234
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL--LSLEHNNIAVVV 504
+ + +++ T S++ L L N++ + F L L L L +NN+ V
Sbjct: 235 NPHLTEKLCWELSNT---SIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVG 291
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN------RLRSLPR-DVFS 557
+F +P+L+ + L +N I L+ FY LR L++ L S P D FS
Sbjct: 292 NGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFS 351
Query: 558 NTIIEKLDISYNQDKIRPGRESN 580
++ L+ D P +SN
Sbjct: 352 FQWLKYLEYLNMDDNNIPSTKSN 374
Score = 203 (76.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 86/318 (27%), Positives = 145/318 (45%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N+ L+L+ N+L+ L F + +L +L+ F+ + E P L + L L+ L +
Sbjct: 53 NITVLNLTHNQLR--RLPPTNFTRYSQLAILDAGFNSISKLE-PE--LCQILPLLKVLNL 107
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N + I + + T+L ++L N I KI +N F N K L ++ LS+N L +
Sbjct: 108 QHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFK-N-QKNLIKLDLSHNGLSSTKL 165
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNN--MLNIVLSFNQIKYIYPNAFVNLPNLV 390
T L+ L + L+ N + ++++ + L N + + LS N +K P F + L
Sbjct: 166 GTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLF 225
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP-IYIKSLDLSNN 449
L L + +L S + NL+L+NN + E+ + LDLS N
Sbjct: 226 ALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYN 285
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+ +V N ++ SLR L L++N I+ L +F L L LSL+ V +
Sbjct: 286 NLHDVG-NGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSV--SLA 342
Query: 510 GMPNLQIIDLSFNEISML 527
PN+ D SF + L
Sbjct: 343 SHPNID--DFSFQWLKYL 358
Score = 134 (52.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 72/302 (23%), Positives = 132/302 (43%)
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
+K +Y +Y+ L ++L +S + +N+ ++L++ I D
Sbjct: 1 MKGCSSYLMYSFGGL--LSLWILLVSSTNQCTVRYNVAD-CSHLKLTH-----IPDDLPS 52
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
N+ LN L++N L+ + T+F + + + FN I + P LP L L+LQ
Sbjct: 53 NITVLN---LTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQH 109
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
N+L + F T+ L+L +N I + N K IK LDLS+N + +
Sbjct: 110 NELSQISDQTFVFCTNLT---ELDLMSNSIHKIKSNPFKNQKNLIK-LDLSHNGLSSTKL 165
Query: 457 NFLQTFADSLRKLYLDFNEIKHL---DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
++L++L L N+I L + GN L L L N + F +
Sbjct: 166 G-TGVQLENLQELLLAKNKILALRSEELEFLGNSS-LRKLDLSSNPLKEFSPGCFQTIGK 223
Query: 514 LQIIDLSFNEISMLTGEQFYFSFK---LRILNISHNRLRSLPRDVFSN---TIIEKLDIS 567
L + L+ +++ E+ + ++ L++++N+L + FS T + +LD+S
Sbjct: 224 LFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLS 283
Query: 568 YN 569
YN
Sbjct: 284 YN 285
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 232 (86.7 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 104/381 (27%), Positives = 175/381 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T+L +F HL L+EL LS N+L I F L++L + + P
Sbjct: 73 NSLTELWPGVFHHLRFLEELRLSGNRLAHIP--GQAFSGLSSLKILMLQNNRLGG--IPA 128
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH-NNLFHFNIHKR 316
L + L L+ L +D N I + + S LTSL ++ L+ N +++I L H +
Sbjct: 129 EALWE-LPGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHL---RA 184
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + L+ N + + F+NL L + L N ++ + SF+ L N+ + L+ NQ+
Sbjct: 185 LQAVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQL- 243
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ +P A L L +L +N ++ F QT ++ +N I + + +
Sbjct: 244 HEFPVAIQTLGRLQELGFHNNNIRAIPEKAFLGNPLLQT---IHFYDNPIQFVGRSAFQH 300
Query: 437 AP-IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
P ++ SL+ + + IQE P + T SL L L ++ L L L +L L
Sbjct: 301 LPGLHTLSLNGATD-IQEFP-DLRGT--TSLESLTLTRAGLQRLPPGMCQQLPRLRVLEL 356
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
HN I + + G L+ I L N I + + F LR L++S N +RS+ +
Sbjct: 357 SHNLIEGLP--SLRGCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEA 414
Query: 556 FSNT-IIEKLDISYNQDKIRP 575
FS + KLD++ NQ + P
Sbjct: 415 FSTLRSLVKLDLTGNQLSVLP 435
Score = 199 (75.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 77/294 (26%), Positives = 131/294 (44%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKR-LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
Y++L N ++++ +FH H R L+E+RLS N L I F L L + L N L
Sbjct: 67 YLDLSMNSLTELWPGVFH---HLRFLEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRL 123
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
I + L + ++ L N I + +F L +L L L DN L + + S++
Sbjct: 124 GGIPAEALWELPGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLR 183
Query: 412 SKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
+ Q + L+ N I + + + L L NNRI+ + + + +L L L
Sbjct: 184 ALQA---VTLALNRIGRVPDYAFWNLSSLVV-LHLHNNRIRHLGAHSFEGL-QNLETLDL 238
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
+ N++ H A L L+ L +NNI + ++ F+G P LQ I N I +
Sbjct: 239 NCNQL-HEFPVAIQTLGRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPIQFVGRSA 297
Query: 532 FYFSFKLRILNISH-NRLRSLPRDVFSNTIIEKLDISY-NQDKIRPGR-ESNPR 582
F L L+++ ++ P D+ T +E L ++ ++ PG + PR
Sbjct: 298 FQHLPGLHTLSLNGATDIQEFP-DLRGTTSLESLTLTRAGLQRLPPGMCQQLPR 350
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 86/369 (23%), Positives = 161/369 (43%)
Query: 40 GIFNSK--LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G+F+ L EL ++G L I AF + + L L+ N ++ +P+ ++ ++
Sbjct: 81 GVFHHLRFLEELRLSGNRLAHIPGQAFSGLSSLKILMLQ--NNRLGGIPAEALWELPGLQ 138
Query: 98 QMTLDLSHNKLSVLNMATLYSNVTKLQHL-----GTTILKDRE-KXXXXXXXXXXRCNKI 151
+ LD N +S++ + + +T L+HL T + R N+I
Sbjct: 139 SLRLDA--NLISLVPDRS-FEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRI 195
Query: 152 TDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHL 211
+ F +L S+V +NN + + CN++ + + + L
Sbjct: 196 GRVPDYAFWNLS-SLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPVAI-QTL 253
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
LQEL N ++ I + F LL+ N +F ++L L L+
Sbjct: 254 GRLQELGFHNNNIRAIPEKA-----FLGNPLLQTIHFYDNPIQFVGRSAFQHLPGLHTLS 308
Query: 272 MDNNNIKNIRNY-SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+ N +I+ + L TSL + L + ++ + + RL+ + LS+N +E +
Sbjct: 309 L--NGATDIQEFPDLRGTTSLESLTLTRAGLQRLPPGMCQ-QL-PRLRVLELSHNLIEGL 364
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
S ++L I L +N + ++ +F+ L + ++ LS+N I+ I+P AF L +LV
Sbjct: 365 PS--LRGCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLV 422
Query: 391 KLDLQDNKL 399
KLDL N+L
Sbjct: 423 KLDLTGNQL 431
Score = 132 (51.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 91/407 (22%), Positives = 163/407 (40%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHL---GTTI--LKGDQLQGIFNSKLRELEITGKDLK 57
LDLS N L+ L ++ ++ L+ L G + + G G+ S L+ L + L
Sbjct: 68 LDLSMNSLTEL-WPGVFHHLRFLEELRLSGNRLAHIPGQAFSGL--SSLKILMLQNNRLG 124
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY 117
I A + L L N I +P F+ + ++ + LD N L+ + + L
Sbjct: 125 GIPAEALWELPGLQSLRLD-ANL-ISLVPDRSFEGLTSLRHLWLD--DNALTEIPVRAL- 179
Query: 118 SNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKN----- 172
S++ LQ T+ +R + L+ N RHL + +N
Sbjct: 180 SHLRALQ--AVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSFEGLQNLETLD 237
Query: 173 -NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS 231
N N + + N I + F LQ + N +Q +
Sbjct: 238 LNCNQLHEFPVAIQTLGRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPIQFV--GR 295
Query: 232 NVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSL 291
+ F L L ++ + + EFP + +LE L + ++ + L L
Sbjct: 296 SAFQHLPGLHTLSLNGAT-DIQEFPDL---RGTTSLESLTLTRAGLQRLPPGMCQQLPRL 351
Query: 292 NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+ L +N I + + ++L+EI L +N + + +DTF L L ++ LS+N +
Sbjct: 352 RVLELSHNLIEGLPS----LRGCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAI 407
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+SI +F L +++ + L+ NQ+ + P A L LV L L+ N+
Sbjct: 408 RSIHPEAFSTLRSLVKLDLTGNQLS-VLPLA--GLGGLVHLKLRGNR 451
>UNIPROTKB|F1N5L8 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:DAAA02067886 IPI:IPI00731735 RefSeq:XP_002699658.1
RefSeq:XP_609417.2 Ensembl:ENSBTAT00000015639 GeneID:530936
KEGG:bta:530936 NextBio:20875355 Uniprot:F1N5L8
Length = 837
Score = 168 (64.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 60/211 (28%), Positives = 106/211 (50%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
K++ ++ N ++ ++ F + L+ + L N + +IK F+NL N+ + L+ NQI+
Sbjct: 380 KKLHVNGNSIKDVDISDFTEFEGLDLLHLGSNQITAIKGDVFRNLTNLRRLYLNGNQIER 439
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+YP F L NL L L+ N +K+ F ++ + Q L L+NN + +L A
Sbjct: 440 LYPEMFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQL---LYLNNNLLKSLPVYIFSGA 496
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P+ L+L NN+ +PV+ + +L ++ L+ N D T +L L+L LE
Sbjct: 497 PL--ARLNLRNNKFMYLPVSGVLDQLQALTQIDLEGNP---WDCTC--DLVALKLW-LEK 548
Query: 498 NNIAVVVKR----TFIGMPNLQIIDLSFNEI 524
N +V+K T + N+++ L NEI
Sbjct: 549 LNDGIVMKELKCETPVQFANIELKSLK-NEI 578
Score = 150 (57.9 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 47/160 (29%), Positives = 78/160 (48%)
Query: 413 KQTPMNLNLSNN-YITNLYE-NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
K P +L LS N N+ ++ P K L ++ N I++V ++ F + L L+
Sbjct: 349 KTHPSDLGLSVNCQEKNIQSMSELIPKPSNAKKLHVNGNSIKDVDISDFTEF-EGLDLLH 407
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
L N+I + F NL L L L N I + F G+ NLQ + L +N I +
Sbjct: 408 LGSNQITAIKGDVFRNLTNLRRLYLNGNQIERLYPEMFSGLHNLQYLYLEYNLIKEILAG 467
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
F L++L +++N L+SLP +FS + +L++ N+
Sbjct: 468 TFDSMPNLQLLYLNNNLLKSLPVYIFSGAPLARLNLRNNK 507
Score = 145 (56.1 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 50/178 (28%), Positives = 85/178 (47%)
Query: 278 KNIRNYS--LYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
KNI++ S + ++ +++ N I + ++ F + L + L +N + I+ D F
Sbjct: 364 KNIQSMSELIPKPSNAKKLHVNGNSIKDV--DISDFTEFEGLDLLHLGSNQITAIKGDVF 421
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
NL L + L+ N ++ + F L+N+ + L +N IK I F ++PNL L L
Sbjct: 422 RNLTNLRRLYLNGNQIERLYPEMFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLN 481
Query: 396 DNKLKDFNLNVFSNITSKQTPM-NLNLSNNYITNLYEN---DKKQAPIYIKSLDLSNN 449
+N LK + +FS P+ LNL NN L + D+ QA + +DL N
Sbjct: 482 NNLLKSLPVYIFSG-----APLARLNLRNNKFMYLPVSGVLDQLQA---LTQIDLEGN 531
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 42/172 (24%), Positives = 85/172 (49%)
Query: 401 DFNLNV-FSNITSKQTPMNLNLSNNYITNLYENDKKQAP-IYIKSLDLSNNRIQEVPVNF 458
D +++V N+ S + N+ N ++Y ++ + P L+ NN + + N
Sbjct: 19 DSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFYHLNFQNNFLNILYPNT 78
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
F+ ++ L L N++++++ AF L L+ L L +N + ++ TF+G+ NL+ +
Sbjct: 79 FLNFSHAV-SLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQ 137
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+N I + F KL++L ++ N + LP ++F + LDI N+
Sbjct: 138 ADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGNR 189
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 43/172 (25%), Positives = 83/172 (48%)
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343
S ++ ++ Y+N E K+S N + NN+L ++ +TF N +
Sbjct: 31 SCVSVENVLYVNCE--KVSVYRPNQLK-PPWSNFYHLNFQNNFLNILYPNTFLNFSHAVS 87
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N L++I+ +F L+ + + L+ N++K + + F+ + NL L N +K
Sbjct: 88 LQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIE 147
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
F+ + + L L++N I+ L +N + A + LD+ NRIQ++P
Sbjct: 148 RGAFNKLHKLKV---LILNDNLISFLPDNIFRFASL--THLDIRGNRIQKLP 194
Score = 133 (51.9 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 240 LQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN------- 292
L L I +L +S I + N ++++N N S+Y L
Sbjct: 3 LWLFLILSALISSTNADSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFY 62
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
++N + N ++ ++ N F N + ++L NN L+ IE F L L + L+ N LK
Sbjct: 63 HLNFQNNFLNILYPNTF-LNFSHAVS-LQLGNNKLQNIEGGAFLGLSALKQLHLNNNELK 120
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
++ +F + N+ + +N IKYI AF L L L L DN + N+F
Sbjct: 121 ILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF 175
Score = 103 (41.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 36/130 (27%), Positives = 71/130 (54%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ ++ G F L L++L L+ N+L+I L ++ F E L+ L+ ++L E
Sbjct: 93 NKLQNIEGGAFLGLSALKQLHLNNNELKI--LRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH--NNLFHFNIHK 315
+ NK L+ L+ L +++N I + + +++ SL ++++ N+I K+ L H
Sbjct: 151 F--NK-LHKLKVLILNDNLISFLPD-NIFRFASLTHLDIRGNRIQKLPYIGVLEHIG--- 203
Query: 316 RLKEIRLSNN 325
R+ E++L +N
Sbjct: 204 RVVELQLEDN 213
Score = 100 (40.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT + G++FR+L NL+ L L+ N QI L +F LQ L + ++L
Sbjct: 411 NQITAIKGDVFRNLTNLRRLYLNGN--QIERLYPEMFSGLHNLQYLYLEYNLIKEILAGT 468
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
+ ++ L+ L ++NN +K++ Y +++ L +NL NK
Sbjct: 469 F---DSMPNLQLLYLNNNLLKSLPVY-IFSGAPLARLNLRNNK 507
Score = 82 (33.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 35/116 (30%), Positives = 49/116 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L N F + + L L NKLQ IE F L+ L + N+NE
Sbjct: 69 NFLNILYPNTFLNFSHAVSLQLGNNKLQNIE--GGAFLGLSALKQLHL-----NNNELKI 121
Query: 258 YILNK--NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+ + LE+L D N IK I + L L + L N IS + +N+F F
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRF 177
Score = 74 (31.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 37/161 (22%), Positives = 74/161 (45%)
Query: 10 LSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDA 69
+SV N+ LY N K+ ++ + +QL+ + S L L + P+ F N
Sbjct: 33 VSVENV--LYVNCEKV-----SVYRPNQLKPPW-SNFYHLNFQNNFLNILYPNTFLNFS- 83
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT- 128
+ ++L++ N +++ + G F + ++Q L L++N+L +L T + + L++L
Sbjct: 84 -HAVSLQLGNNKLQNIEGGAFLGLSALKQ--LHLNNNELKILRADT-FLGIENLEYLQAD 139
Query: 129 -TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
++K E+ K+ LN NL L +I +
Sbjct: 140 YNLIKYIERGAFNKLHKL----KVLILNDNLISFLPDNIFR 176
>UNIPROTKB|O60346 [details] [associations]
symbol:PHLPP1 "PH domain leucine-rich repeat-containing
protein phosphatase 1" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009649 "entrainment of circadian clock"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004722 "protein serine/threonine
phosphatase activity" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0008543 "fibroblast growth
factor receptor signaling pathway" evidence=TAS] [GO:0048011
"neurotrophin TRK receptor signaling pathway" evidence=TAS]
[GO:0048015 "phosphatidylinositol-mediated signaling" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001849
InterPro:IPR001932 Pfam:PF00481 PROSITE:PS50003 PROSITE:PS51450
SMART:SM00233 SMART:SM00332 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0007173 GO:GO:0008543 GO:GO:0048011
GO:GO:0016020 GO:GO:0004722 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 GO:GO:0009649 GO:GO:0007623
eggNOG:COG4886 GO:GO:0048015 Gene3D:3.60.40.10 SUPFAM:SSF81606
EMBL:AC015989 EMBL:AC022046 EMBL:AC027553 EMBL:AB011178
EMBL:BC010706 EMBL:BC014927 EMBL:BC047653 EMBL:BC063519
EMBL:BC082244 EMBL:BC126277 EMBL:AK001924 IPI:IPI00297617
PIR:T00258 RefSeq:NP_919431.2 UniGene:Hs.465337
ProteinModelPortal:O60346 SMR:O60346 IntAct:O60346 STRING:O60346
PhosphoSite:O60346 PaxDb:O60346 PeptideAtlas:O60346 PRIDE:O60346
Ensembl:ENST00000262719 Ensembl:ENST00000400316 GeneID:23239
KEGG:hsa:23239 UCSC:uc021ule.1 CTD:23239 GeneCards:GC18P060382
H-InvDB:HIX0014494 H-InvDB:HIX0174202 HGNC:HGNC:20610 MIM:609396
neXtProt:NX_O60346 PharmGKB:PA165429055 InParanoid:O60346 KO:K16340
OMA:CCELSAG OrthoDB:EOG4HMJ8G ChiTaRS:PHLPP1 GenomeRNAi:23239
NextBio:44894 Bgee:O60346 CleanEx:HS_PHLPP Genevestigator:O60346
GermOnline:ENSG00000081913 Uniprot:O60346
Length = 1717
Score = 235 (87.8 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 102/407 (25%), Positives = 197/407 (48%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKL-QIIELNS----NVFDVFEKLQLLEISFSLFN 251
C + L NLF + +L L+L N L Q L + N F KL+ L +S + +
Sbjct: 646 CCSLEHLPANLF-YSQDLTHLNLKQNFLRQNPSLPAARGLNELQRFTKLKSLNLSNN--H 702
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+FP + + + TL L + N ++++ ++ + +L L+ N + + L +
Sbjct: 703 LGDFPLAVCS--IPTLAELNVSCNALRSVPA-AVGVMHNLQTFLLDGNFLQSLPAELENM 759
Query: 312 NIHKRLKEIRLS-NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
K+L + LS N + ++ E L ++ + +S N +++++ + + + ++ ++ L
Sbjct: 760 ---KQLSYLGLSFNEFTDIPE--VLEKLTAVDKLCMSGNCVETLRLQALRKMPHIKHVDL 814
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN----LNLSNNYI 426
N I+ + + L ++ +LDL+DNKL D + +F+NI N L++ ++
Sbjct: 815 RLNVIRKLIADEVDFLQHVTQLDLRDNKLGDLDAMIFNNIEVLHCERNQLVTLDICGYFL 874
Query: 427 TNLY--ENDKKQ-----APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
LY N+ Q P Y+ +D+S NR++ VP ++ L L + N+I L
Sbjct: 875 KALYASSNELVQLDVYPVPNYLSYMDVSRNRLENVPEWVCES--RKLEVLDIGHNQICEL 932
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
A F N + +LL+ HN +A + +R + +++++D+ N++ L + LR
Sbjct: 933 PARLFCNSSLRKLLA-GHNQLARLPER--LERTSVEVLDVQHNQLLELPPNLLMKADSLR 989
Query: 540 ILNISHNRLRSLPRDVFS---NTIIEKLDISYNQ--DKIRPGRESNP 581
LN S N+L SLP S N+I+++L ++ N DK P +P
Sbjct: 990 FLNASANKLESLPPATLSEETNSILQELYLTNNSLTDKCVPLLTGHP 1036
Score = 199 (75.1 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 86/365 (23%), Positives = 177/365 (48%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
++NLQ L N LQ + + ++L L +SF+ F + P +L K L ++ L
Sbjct: 736 MHNLQTFLLDGNFLQSLPAE---LENMKQLSYLGLSFNEFT--DIPE-VLEK-LTAVDKL 788
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
M N ++ +R +L + + +++L N I K+ + F H + ++ L +N L +
Sbjct: 789 CMSGNCVETLRLQALRKMPHIKHVDLRLNVIRKLIADEVDFLQH--VTQLDLRDNKLGDL 846
Query: 331 ESDTFYNLKELN-------TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY--IYPN 381
++ F N++ L+ T+ + LK++ +S N L++ N + Y + N
Sbjct: 847 DAMIFNNIEVLHCERNQLVTLDICGYFLKALYASS--NELVQLDVYPVPNYLSYMDVSRN 904
Query: 382 AFVNLPNLV----KLDLQD---NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
N+P V KL++ D N++ + +F N + ++ L +N + L E +
Sbjct: 905 RLENVPEWVCESRKLEVLDIGHNQICELPARLFCNSSLRK----LLAGHNQLARLPERLE 960
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD-ATAFGNLD-VLEL 492
+ + ++ LD+ +N++ E+P N L ADSLR L N+++ L AT + +L+
Sbjct: 961 RTS---VEVLDVQHNQLLELPPNLLMK-ADSLRFLNASANKLESLPPATLSEETNSILQE 1016
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L L +N++ G P+L+I+ +++N + + +L +++S N+L+++P
Sbjct: 1017 LYLTNNSLTDKCVPLLTGHPHLKILHMAYNRLQSFPASKMAKLEELEEIDLSGNKLKAIP 1076
Query: 553 RDVFS 557
+ +
Sbjct: 1077 TTIMN 1081
Score = 133 (51.9 bits), Expect = 0.00010, P = 0.00010
Identities = 65/299 (21%), Positives = 136/299 (45%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L+ L +N + + Y + N L+Y+++ N++ + + ++L+ + + +N
Sbjct: 874 LKALYASSNELVQLDVYPVPNY--LSYMDVSRNRLENVPEWVCE---SRKLEVLDIGHNQ 928
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
+ + + F N L + +N L + + +L++ NQ+ + PN +
Sbjct: 929 ICELPARLFCN-SSLRKLLAGHNQLARLPERLERTSVEVLDV--QHNQLLELPPNLLMKA 985
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
+L L+ NKL+ S T+ L L+NN +T+ P ++K L +
Sbjct: 986 DSLRFLNASANKLESLPPATLSEETNSIL-QELYLTNNSLTDKCVPLLTGHP-HLKILHM 1043
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
+ NR+Q P + + + L ++ L N++K + T N + + + H+N V
Sbjct: 1044 AYNRLQSFPASKMAKL-EELEEIDLSGNKLKAIPTTIM-NCRRMHTV-IAHSNCIEVFPE 1100
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLD 565
+ +P ++ +DLS NE+S +T + KL+ L+++ N PR V + +E L+
Sbjct: 1101 V-MQLPEIKCVDLSCNELSEVTLPE-NLPPKLQELDLTGN-----PRLVLDHKTLELLN 1152
>UNIPROTKB|E1C7T4 [details] [associations]
symbol:PRELP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0007569 "cell aging" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0031012 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 CTD:5549 KO:K08125
PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:AADN02066901
IPI:IPI00587003 RefSeq:XP_418054.2 PRIDE:E1C7T4
Ensembl:ENSGALT00000005617 GeneID:419933 KEGG:gga:419933
NextBio:20822920 Uniprot:E1C7T4
Length = 374
Score = 223 (83.6 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 84/280 (30%), Positives = 131/280 (46%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
+N+R + + ++Y+ L+ N I + F N LK + L NN + ++
Sbjct: 83 RNLRKVPIIP-SRIHYLYLQNNFIDDLPEESFR-NA-TALKWVNLDNNRIRKVDRRVLEK 139
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L+ L + + N LK + NL + LS NQI I F L NLV LDL N
Sbjct: 140 LENLIFLYMEKNQLKEVPAFLPPNLEQLR---LSRNQISKIPAGVFNKLENLVLLDLHHN 196
Query: 398 KLKD--FNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
KL D FN N F + + M LNL++N + + P I L L N I+++P
Sbjct: 197 KLSDGVFNKNTFKGLKNL---MQLNLAHNILRKMPPG----VPSAIHQLFLDRNNIEDIP 249
Query: 456 VNFLQTFADSLRKLYLDFNEI--KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
++ + F + L + L++N+I K L +F NL L +L L HN + V FI
Sbjct: 250 SDYFKEFPN-LAFIRLNYNQISDKGLPKNSF-NLTNLLVLHLAHNKLTNV---PFISA-K 303
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPR 553
L+ + L+ N I + G Q + + I + S + L S+PR
Sbjct: 304 LEHLYLNNNSIEKINGTQICPTSLMSIQDFSPSDLDSVPR 343
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 60/231 (25%), Positives = 110/231 (47%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+N L+W+ +DNN I+ + L L +L ++ +E N++ ++ F + L+++R
Sbjct: 114 RNATALKWVNLDNNRIRKVDRRVLEKLENLIFLYMEKNQLKEVP--AF---LPPNLEQLR 168
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKS--IKTTSFKNLNNMLNIVLSFNQIKYIY 379
LS N + I + F L+ L + L +N L +FK L N++ + L+ N ++ +
Sbjct: 169 LSRNQISKIPAGVFNKLENLVLLDLHHNKLSDGVFNKNTFKGLKNLMQLNLAHNILRKMP 228
Query: 380 PNA-------FVNLPNLVKLDLQDNKLKDF-NLNV----FSNITSKQTPMN-LNLSNNYI 426
P F++ N+ D+ + K+F NL ++ I+ K P N NL+N +
Sbjct: 229 PGVPSAIHQLFLDRNNIE--DIPSDYFKEFPNLAFIRLNYNQISDKGLPKNSFNLTNLLV 286
Query: 427 TNLYENDKKQAPIYIKSLD---LSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+L N P L+ L+NN I+++ N Q SL + DF+
Sbjct: 287 LHLAHNKLTNVPFISAKLEHLYLNNNSIEKI--NGTQICPTSLMSIQ-DFS 334
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L L NN+I +L E + A +K ++L NNRI++V L+ ++L LY++ N++K
Sbjct: 98 LYLQNNFIDDLPEESFRNATA-LKWVNLDNNRIRKVDRRVLEKL-ENLIFLYMEKNQLKE 155
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS--MLTGEQFYFSF 536
+ A NL E L L N I+ + F + NL ++DL N++S + F
Sbjct: 156 VPAFLPPNL---EQLRLSRNQISKIPAGVFNKLENLVLLDLHHNKLSDGVFNKNTFKGLK 212
Query: 537 KLRILNISHNRLRSLPRDV 555
L LN++HN LR +P V
Sbjct: 213 NLMQLNLAHNILRKMPPGV 231
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 62/208 (29%), Positives = 100/208 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS-NEFP 256
N I DL FR+ L+ ++L N+++ ++ V EKL+ L + N E P
Sbjct: 103 NFIDDLPEESFRNATALKWVNLDNNRIRKVDRR-----VLEKLENLIFLYMEKNQLKEVP 157
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ L NL E L + N I I L +L ++L +NK+S + +F+ N K
Sbjct: 158 AF-LPPNL---EQLRLSRNQISKIPAGVFNKLENLVLLDLHHNKLS---DGVFNKNTFKG 210
Query: 317 LK---EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
LK ++ L++N L + ++ + L N ++ I + FK N+ I L++N
Sbjct: 211 LKNLMQLNLAHNILRKMPPGV---PSAIHQLFLDRNNIEDIPSDYFKEFPNLAFIRLNYN 267
Query: 374 QI--KYIYPNAFVNLPNLVKLDLQDNKL 399
QI K + N+F NL NL+ L L NKL
Sbjct: 268 QISDKGLPKNSF-NLTNLLVLHLAHNKL 294
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 61/238 (25%), Positives = 111/238 (46%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
+ +L + NN I ++ S N T+L ++NL+ N+I K+ + + + L + + N
Sbjct: 95 IHYLYLQNNFIDDLPEESFRNATALKWVNLDNNRIRKVDRRVLE-KL-ENLIFLYMEKNQ 152
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK--YIYPNAFV 384
L+ + + NL++L LS N + I F L N++ + L N++ N F
Sbjct: 153 LKEVPAFLPPNLEQLR---LSRNQISKIPAGVFNKLENLVLLDLHHNKLSDGVFNKNTFK 209
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
L NL++L+L N L+ V S I L L N I ++ + K+ P + +
Sbjct: 210 GLKNLMQLNLAHNILRKMPPGVPSAIHQ------LFLDRNNIEDIPSDYFKEFP-NLAFI 262
Query: 445 DLSNNRIQE--VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
L+ N+I + +P N +L L+L N++ ++ + LE L L +N+I
Sbjct: 263 RLNYNQISDKGLPKNSFNL--TNLLVLHLAHNKLTNVPFISAK----LEHLYLNNNSI 314
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 178 (67.7 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 80/290 (27%), Positives = 125/290 (43%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L ++NN + ++ L L INL NKI+ I F + + E+ L++N LE
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAF--DGASGVNELLLTSNRLE 591
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F L+ L T+ L N + + SF L+++ + L NQI + P +F L +
Sbjct: 592 TVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHS 651
Query: 389 LVKLDLQDNKLK-DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
L L+L N + +L + K+ + N L E + I + D
Sbjct: 652 LSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDG 711
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG-NLDVLELLSLEHNNIAVVVKR 506
N+ P++ L + N K L A G DV EL L+ N +V K
Sbjct: 712 NDDNSCSPLSRCPAECTCLDTVVRCSN--KGLKALPKGIPKDVTELY-LDGNQFTLVPKE 768
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+L +IDLS N IS L+ + F +L L +S+NRLR +P F
Sbjct: 769 -LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTF 817
Score = 164 (62.8 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 49/161 (30%), Positives = 81/161 (50%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
NT E L ++ NNI I L L + L NKIS I F ++ K L+ +RL+
Sbjct: 52 NT-ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQ-DL-KELERLRLNR 108
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N L+L+ F +L + LS N +++I +F+ ++ N+ L +NQI I AF
Sbjct: 109 NNLQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFR 168
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
L +L L L +N + ++ F+++ +T L+ +N Y
Sbjct: 169 ALRDLEVLTLNNNNITRLSVASFNHMPKLRT-FRLHSNNLY 208
Score = 160 (61.4 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 51/156 (32%), Positives = 80/156 (51%)
Query: 274 NNNIKNIRNYSLYNL-TSL----NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + T+L I LE N I I F + +K+L+ I LSNN +
Sbjct: 276 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAF--SPYKKLRRIDLSNNQIS 333
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
D F L+ LN++ L N + + F+ L ++ ++L+ N+I + +AF +L N
Sbjct: 334 EAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 393
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L L L DNKL+ FS + + QT L+L+ N
Sbjct: 394 LNLLSLYDNKLQTIAKGTFSPLRAIQT---LHLAQN 426
Score = 152 (58.6 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 360 KNL-NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
+N+ N + L+ N I I F L +L L L +NK+ F ++ +
Sbjct: 47 RNIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELE---R 103
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L L+ N + L E P + LDLS N+IQ +P + D ++ L LD+N+I
Sbjct: 104 LRLNRNNLQLLSELLFLGTPKLYR-LDLSENQIQAIPRKAFRGAVD-IKNLQLDYNQISC 161
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
++ AF L LE+L+L +NNI + +F MP L+ L N +
Sbjct: 162 IEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 207
Score = 142 (55.0 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 85/343 (24%), Positives = 146/343 (42%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N+ ++E +F+KL QL +I+ S + + E L + +
Sbjct: 533 ELRLNNNEFSVLEATG----IFKKLPQLRKINLSNNKITDIEEGAFDGASGVNE-LLLTS 587
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N ++ +R+ L SL + L N++S + N+ F RL + L +N + + +
Sbjct: 588 NRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRL--LSLYDNQITTVAPGS 645
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP-NAFVNLPNLVK-L 392
F L L+T+ NLL + F N N L + + + K I N P +K +
Sbjct: 646 FDTLHSLSTL----NLLAN----PF-NCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEI 696
Query: 393 DLQDNKLKDFNLNVFSNITS----KQTPMNLNLSNNYITNLYENDK---KQAPIYIKSLD 445
+QD ++DF + ++ S + P + + + K K P + L
Sbjct: 697 PIQDVAIQDFTCDDGNDDNSCSPLSRCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELY 756
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L + L + L N I L +F N+ L L L +N + +
Sbjct: 757 LDGNQFTLVPKE-LSNYKH-LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPA 814
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
RTF G+ +L+++ L N+IS++ F L L I N L
Sbjct: 815 RTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 857
Score = 129 (50.5 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 43/167 (25%), Positives = 79/167 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI + + + L+ N + I F L+ L + L N + +I+ +F++L + + L+
Sbjct: 48 NIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLN 107
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N ++ + F+ P L +LDL +N+++ F + NL L N I+ + E
Sbjct: 108 RNNLQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIK---NLQLDYNQISCI-E 163
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPV-NF-----LQTFADSLRKLYLD 472
+ +A ++ L L+NN I + V +F L+TF LY D
Sbjct: 164 DGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 210
Score = 128 (50.1 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 38/141 (26%), Positives = 71/141 (50%)
Query: 297 EYNKISKIHNNLFHF----NIHKRLKEIR---LSNNYLELIESDTFYNLKELNTITLSYN 349
+Y +++NN F I K+L ++R LSNN + IE F +N + L+ N
Sbjct: 529 QYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSN 588
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L++++ FK L ++ ++L N++ + ++F L ++ L L DN++ F
Sbjct: 589 RLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDT 648
Query: 410 ITSKQTPMNLNLSNNYITNLY 430
+ S T +NL L+N + N +
Sbjct: 649 LHSLST-LNL-LANPFNCNCH 667
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 31/104 (29%), Positives = 56/104 (53%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+L L+ N I + T F L L +L L N I+ + + F + L+ + L+ N + +L
Sbjct: 55 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLL 114
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
+ F + KL L++S N+++++PR F + I+ L + YNQ
Sbjct: 115 SELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQ 158
Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
+ P + LDL+ N I + LR L L N+I ++ AF +L LE L
Sbjct: 47 RNIPRNTERLDLNGNNITRITKTDFAGLRH-LRVLQLMENKISTIERGAFQDLKELERLR 105
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
L NN+ ++ + F+G P L +DLS N+I + + F + ++ L + +N++ +
Sbjct: 106 LNRNNLQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDG 165
Query: 555 VF 556
F
Sbjct: 166 AF 167
Score = 124 (48.7 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P I + L N I+ +P + LR++ L N+I AF L L L L
Sbjct: 295 PETITEIRLEQNSIKVIPPGAFSPYK-KLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYG 353
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + K F G+ +LQ++ L+ N+I+ L + F L +L++ N+L+++ + FS
Sbjct: 354 NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 413
Query: 558 NT-IIEKLDISYN 569
I+ L ++ N
Sbjct: 414 PLRAIQTLHLAQN 426
Score = 123 (48.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 34/133 (25%), Positives = 65/133 (48%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I K + E+ L N L+ + N K L I LS N + ++ SF N+ +L ++LS+
Sbjct: 748 IPKDVTELYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 806
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLK-----DFN-LNVFSNITSKQTPMNLNLSNNYI 426
N+++ I F L +L L L N + FN L+ S++ P+ + + ++
Sbjct: 807 NRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWL 866
Query: 427 TNLYENDKKQAPI 439
++ +++ K+ I
Sbjct: 867 SDWVKSEYKEPGI 879
Score = 117 (46.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L+ N+ + + L ++ K L I LSNN + + + +F N+ +L T+ LSYN L+ I
Sbjct: 757 LDGNQFTLVPKELSNY---KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 813
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVFSN 409
+F L ++ + L N I + AF +L L L + N L D N+ S+
Sbjct: 814 ARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 868
Score = 116 (45.9 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 87/354 (24%), Positives = 143/354 (40%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
K + + +NN + D + NKIT+L LF L++LQ L L+ NK
Sbjct: 320 KKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANK 379
Query: 224 LQIIEL-------NSNVFDVFE-KLQLL-EISFSLFNSNEFPYYILNKNLNT--LEWLAM 272
+ + + N N+ +++ KLQ + + +FS + + + N + L+WLA
Sbjct: 380 INCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLA- 438
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
D + I S TS L +I +I + F + K I + +Y +
Sbjct: 439 DYLHTNPIET-SGARCTSPR--RLANKRIGQIKSKKFRCSA-KEQYFIPGTEDYRSKLSG 494
Query: 333 DTFYNLK-------ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA-FV 384
D F +L E T+ S L I L L+ N+ + F
Sbjct: 495 DCFADLACPEKCRCEGTTVDCSNQKLNKIPD-HIPQYTAELR--LNNNEFSVLEATGIFK 551
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
LP L K++L +NK+ D F + L L++N + + + K +K+L
Sbjct: 552 KLPQLRKINLSNNKITDIEEGAFDGASGVN---ELLLTSNRLETVRDKMFKGLES-LKTL 607
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
L +NR+ V N T S+R L L N+I + +F L L L+L N
Sbjct: 608 MLRSNRVSCVG-NDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLAN 660
Score = 105 (42.0 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y L L+NN + + LRK+ L N+I ++ AF G V ELL L
Sbjct: 528 PQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELL-LT 586
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
N + V + F G+ +L+ + L N +S + + F +R+L++ N++ ++
Sbjct: 587 SNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTV 641
Score = 102 (41.0 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIA 501
++D SN ++ ++P + Q A+ L L+ NE L+AT F L L ++L +N I
Sbjct: 512 TVDCSNQKLNKIPDHIPQYTAE----LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKIT 567
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TI 560
+ + F G + + L+ N + + + F L+ L + NR+ + D F+ +
Sbjct: 568 DIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSS 627
Query: 561 IEKLDISYNQ-DKIRPG 576
+ L + NQ + PG
Sbjct: 628 VRLLSLYDNQITTVAPG 644
Score = 99 (39.9 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 39/154 (25%), Positives = 70/154 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT + F L +L+ L L NK+ IE + F ++L+ L ++ N+ +
Sbjct: 61 NNITRITKTDFAGLRHLRVLQLMENKISTIERGA--FQDLKELERLRLNR---NNLQLLS 115
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+L L L + N I+ I + + + L+YN+IS I + F + L
Sbjct: 116 ELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFR--ALRDL 173
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+ + L+NN + + +F ++ +L T L N L
Sbjct: 174 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 207
Score = 97 (39.2 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+LYLD N+ L N L L+ L +N I+ + ++F M L + LS+N + +
Sbjct: 754 ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCI 812
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
F LR+L++ N + +P F++ + + L I N
Sbjct: 813 PARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 855
Score = 88 (36.0 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 33/136 (24%), Positives = 63/136 (46%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N+IK I + L I+L N+IS+ + F + + L +
Sbjct: 293 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQ-GL-RSLNSLV 350
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + ++ +F++L+N+ + L N+++ I
Sbjct: 351 LYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 410
Query: 382 AFVNLPNLVKLDLQDN 397
F L + L L N
Sbjct: 411 TFSPLRAIQTLHLAQN 426
Score = 81 (33.6 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 40 GIFN--SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F+ KLR ++++ + P AF + + L L +I ELP GLF+ + +++
Sbjct: 314 GAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLY--GNKITELPKGLFEGLFSLQ 371
Query: 98 QMTLDLSH-NKLSV--------LNMATLYSNVTKLQ 124
+ L+ + N L V LN+ +LY N KLQ
Sbjct: 372 LLLLNANKINCLRVDAFQDLHNLNLLSLYDN--KLQ 405
Score = 79 (32.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 28/111 (25%), Positives = 58/111 (52%)
Query: 2 TLDLSHNKLSVL-NMATLYSNVTKLQHLGTTILKGDQLQGIFNS--KLRELEITGKDLKF 58
T+D S+ KL+ + + Y+ +L + ++L+ GIF +LR++ ++ +
Sbjct: 512 TVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEAT---GIFKKLPQLRKINLSNNKITD 568
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS 109
I+ AFD +L L T+ ++E + +F +E+++ TL L N++S
Sbjct: 569 IEEGAFDGASGVNELLL--TSNRLETVRDKMFKGLESLK--TLMLRSNRVS 615
Score = 55 (24.4 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 34/156 (21%), Positives = 65/156 (41%)
Query: 29 GTTI-LKGDQLQGIFNSKLRE---LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEE 84
G+T+ G L+G+ + R L++ G ++ I + F + + L++ +I
Sbjct: 32 GSTVDCHGLALRGVPRNIPRNTERLDLNGNNITRITKTDFAGLR--HLRVLQLMENKIST 89
Query: 85 LPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTT------ILKDREKXX 138
+ G F ++ +E+ L L+ N L +L+ L+ KL L + I + +
Sbjct: 90 IERGAFQDLKELER--LRLNRNNLQLLS-ELLFLGTPKLYRLDLSENQIQAIPRKAFRGA 146
Query: 139 XXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNN 174
N+I+ + FR L+ V NNN
Sbjct: 147 VDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNN 182
Score = 44 (20.5 bits), Expect = 7.5e-09, Sum P(3) = 7.5e-09
Identities = 22/77 (28%), Positives = 29/77 (37%)
Query: 149 NKITDLNGNLFR---HLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG 205
NKIT+L LF LQ ++ A K N D D NK+ +
Sbjct: 354 NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD----NKLQTIAK 409
Query: 206 NLFRHLYNLQELSLSFN 222
F L +Q L L+ N
Sbjct: 410 GTFSPLRAIQTLHLAQN 426
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 72/230 (31%), Positives = 115/230 (50%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
Y+NL+ N I I + F H L+ ++LS N + IE F L LNT+ L N L
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRH--LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT 147
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ T +F+ L+ + + L N I+ I AF +P+L +LDL +LK L S
Sbjct: 148 TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL--GELK--RLEYISEAAF 203
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
+ +NL N + NL + A + ++ L+LS NR+ + Q SLRKL+L
Sbjct: 204 EGL-VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLT-SLRKLWLM 261
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
++ ++ AF +L LE L+L HNN+ + F + L+ + L+ N
Sbjct: 262 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 181 (68.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 65/234 (27%), Positives = 118/234 (50%)
Query: 341 LNT--ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+NT + L N ++ I+T +FK+L ++ + LS N ++ I AF LP+L L+L DN+
Sbjct: 86 VNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNR 145
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVN 457
L F ++ + L L NN I ++ + P ++ LDL R++ +
Sbjct: 146 LTTVPTQAFEYLSKLR---ELWLRNNPIESIPSYAFNRVPS-LRRLDLGELKRLEYISEA 201
Query: 458 FLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
+ + LR L L +K + + TA L+ LEL N + ++ +F G+ +L+
Sbjct: 202 AFEGLVN-LRYLNLGMCNLKDIPNLTALVRLEELELSG---NRLDLIRPGSFQGLTSLRK 257
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ L +++ + F L LN+SHN L SLP D+F+ +E++ +++N
Sbjct: 258 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 62/213 (29%), Positives = 105/213 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N I + + F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 96 NGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFE 155
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++ I F ++
Sbjct: 156 Y--LSK-LREL-WLR--NNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 209
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L+ I + T L L + LS N L I+ SF+ L ++ + L Q+
Sbjct: 210 RYLNLGMCN--LKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 265
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
I NAF +L +L +L+L N L ++F+
Sbjct: 266 ATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT 298
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 57/214 (26%), Positives = 99/214 (46%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N ++ I + L SLN + L N+++ + F + +L+E+
Sbjct: 107 KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYL--SKLRELW 164
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I S F + L + L L+ I +F+ L N+ + L +K I P
Sbjct: 165 LRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI-P 223
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
N L L +L+L N+L F +TS + L L + + + N
Sbjct: 224 N-LTALVRLEELELSGNRLDLIRPGSFQGLTSLR---KLWLMHAQVATIERNAFDDLKS- 278
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
++ L+LS+N + +P + L T L +++L+ N
Sbjct: 279 LEELNLSHNNLMSLPHD-LFTPLHRLERVHLNHN 311
>UNIPROTKB|F1P0K8 [details] [associations]
symbol:Gga.13956 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007165 "signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 InterPro:IPR003591 SMART:SM00369
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104287
EMBL:AADN02000699 IPI:IPI00585441 ProteinModelPortal:F1P0K8
Ensembl:ENSGALT00000015265 OMA:CYLESAD Uniprot:F1P0K8
Length = 713
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 108/397 (27%), Positives = 176/397 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+++ L L + L N++EL L+ N + + L+ LE++ + +
Sbjct: 78 NRLSCLPEELPK-LVNIKELFLNHNNIDEFPF------ALKSLETLELAGNKLKTLSDTM 130
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLY--NLTSL----NYINL---EYNKISKI---- 304
+ KNL L +D+N I Y NL SL N+I + + K+
Sbjct: 131 VDM-KNLKVLN---IDSNQISIFPRVLCYLPNLVSLSLCENFIQSLPKDIKGLKKLQEFS 186
Query: 305 --HNNLFHFNIH----KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS 358
HN L ++ +LK +R +N LE + SD NL+EL + LS NL K+I T +
Sbjct: 187 VSHNKLMFLSVQLFQLTKLKRLRADDNKLEFL-SDKVENLRELTFLNLSKNLFKTI-TDN 244
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
N + +++L NQ+ + P L +L +L L N+L + I+ +
Sbjct: 245 LCNCTMLKHLILCDNQLTQL-PANIDRLKHLKELSLSGNQLNSLD----EQISHLKDLSK 299
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
+ LS N +T Y + + I DLSNN++ + P L +D L+ L L N I
Sbjct: 300 IELSGNVLT--YIPVELKTCTQITKADLSNNKLSQFPYA-LCALSD-LKYLNLSGNSISE 355
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
L ++ LE L L N ++ + L +D+S NEI+ L L
Sbjct: 356 L-IPGISDIKDLEHLELNKNKLSSF-SACLCSLTKLVYLDVSENEINSLPAVVSEMK-AL 412
Query: 539 RILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
++L + HN+ S P ++ S ++ LDIS NQ K P
Sbjct: 413 QVLLLHHNKFGSFPEELCSLKGLKTLDISNNQIKTIP 449
Score = 220 (82.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 125/522 (23%), Positives = 225/522 (43%)
Query: 74 TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKD 133
TL++++ ++++P + +N++ TL L +N++ L + T+ N+T L+ L IL+
Sbjct: 3 TLRLSDKGLQDVPLSA-SETQNVK--TLLLQNNEIKTLRLNTV--NLTNLEIL---ILER 54
Query: 134 REKXXXXXXXXXXRCNKITDLNGN----LFRHLQKSI-VKAKKNNNNNEDQVSDREKXXX 188
K+ +++ N L L K + +K N+NN D+ K
Sbjct: 55 NRLTQLPPEISLLHKLKVLNVSHNRLSCLPEELPKLVNIKELFLNHNNIDEFPFALKSLE 114
Query: 189 XXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS 248
NK+ L+ + + NL+ L++ N++ I V L L + +
Sbjct: 115 TLELAG---NKLKTLSDTMV-DMKNLKVLNIDSNQISIFP---RVLCYLPNLVSLSLCEN 167
Query: 249 LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKIS----KI 304
S P I K L L+ ++ +N + + + L+ LT L + + NK+ K+
Sbjct: 168 FIQS--LPKDI--KGLKKLQEFSVSHNKLMFL-SVQLFQLTKLKRLRADDNKLEFLSDKV 222
Query: 305 HN--NLFHFNIHKRL--------------KEIRLSNNYLELIESDTFYNLKELNTITLSY 348
N L N+ K L K + L +N L + ++ LK L ++LS
Sbjct: 223 ENLRELTFLNLSKNLFKTITDNLCNCTMLKHLILCDNQLTQLPAN-IDRLKHLKELSLSG 281
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L S+ +L ++ I LS N + YI P + K DL +NKL F + +
Sbjct: 282 NQLNSLDE-QISHLKDLSKIELSGNVLTYI-PVELKTCTQITKADLSNNKLSQFPYALCA 339
Query: 409 NITSKQTPMNLNLSNNYITNLYE--NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSL 466
K LNLS N I+ L +D K ++ L+L+ N++ +F
Sbjct: 340 LSDLKY----LNLSGNSISELIPGISDIKD----LEHLELNKNKLS----SFSACLCSLT 387
Query: 467 RKLYLDF--NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
+ +YLD NEI L A + L++L L HN + + L+ +D+S N+I
Sbjct: 388 KLVYLDVSENEINSLPAVV-SEMKALQVLLLHHNKFGSFPEE-LCSLKGLKTLDISNNQI 445
Query: 525 SMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDI 566
+ + ++ LN+S+N+ S P ++ + +EKL +
Sbjct: 446 KTIPLKISRLE-TIKDLNVSNNQFASFPSEICHLSSLEKLTV 486
Score = 208 (78.3 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 102/381 (26%), Positives = 178/381 (46%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L +L+ L L+ NKL+ L+ + D+ + L++L I + + FP + L L L
Sbjct: 110 LKSLETLELAGNKLKT--LSDTMVDM-KNLKVLNIDSNQISI--FPRVLCY--LPNLVSL 162
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
++ N I+++ + L L ++ +NK+ + LF +LK +R +N LE +
Sbjct: 163 SLCENFIQSLPK-DIKGLKKLQEFSVSHNKLMFLSVQLFQLT---KLKRLRADDNKLEFL 218
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
SD NL+EL + LS NL K+I T + N + +++L NQ+ + P L +L
Sbjct: 219 -SDKVENLRELTFLNLSKNLFKTI-TDNLCNCTMLKHLILCDNQLTQL-PANIDRLKHLK 275
Query: 391 KLDLQDNKL----------KDFN-LNVFSNITSKQTPMNLNLSNNYI-TNLYENDKKQAP 438
+L L N+L KD + + + N+ + P+ L +L N Q P
Sbjct: 276 ELSLSGNQLNSLDEQISHLKDLSKIELSGNVLT-YIPVELKTCTQITKADLSNNKLSQFP 334
Query: 439 IYI------KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT--AFGNLDVL 490
+ K L+LS N I E+ + + D L L L+ N++ A + L L
Sbjct: 335 YALCALSDLKYLNLSGNSISEL-IPGISDIKD-LEHLELNKNKLSSFSACLCSLTKLVYL 392
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK-LRILNISHNRLR 549
++ E N++ VV M LQ++ L N+ E S K L+ L+IS+N+++
Sbjct: 393 DVSENEINSLPAVVSE----MKALQVLLLHHNKFGSFPEE--LCSLKGLKTLDISNNQIK 446
Query: 550 SLPRDVFSNTIIEKLDISYNQ 570
++P + I+ L++S NQ
Sbjct: 447 TIPLKISRLETIKDLNVSNNQ 467
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 123/512 (24%), Positives = 221/512 (43%)
Query: 74 TLKITNTQIEELPSG----LFDKIENIEQM-TLDLSHNKLSVLNMATLYSNVTKLQHLGT 128
T+ +TN +I L L +I + ++ L++SHN+LS L + KL ++
Sbjct: 41 TVNLTNLEILILERNRLTQLPPEISLLHKLKVLNVSHNRLSCLP-----EELPKLVNIKE 95
Query: 129 TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKK----NNNNNEDQVSDRE 184
L + + +L GN + L ++V K N ++N+ + R
Sbjct: 96 LFLNHNN---IDEFPFALKSLETLELAGNKLKTLSDTMVDMKNLKVLNIDSNQISIFPRV 152
Query: 185 KXXXXXXXXXXRC-NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLL 243
C N I L ++ + L LQE S+S NKL + + +F + KL+ L
Sbjct: 153 LCYLPNLVSLSLCENFIQSLPKDI-KGLKKLQEFSVSHNKLMFLSVQ--LFQL-TKLKRL 208
Query: 244 EISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISK 303
N EF + +NL L +L + N K I + +L N T L ++ L N++++
Sbjct: 209 RADD---NKLEFLSDKV-ENLRELTFLNLSKNLFKTITD-NLCNCTMLKHLILCDNQLTQ 263
Query: 304 IHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
+ N+ K LKE+ LS N L ++ + +LK+L+ I LS N+L I K
Sbjct: 264 LPANIDRL---KHLKELSLSGNQLNSLD-EQISHLKDLSKIELSGNVLTYIPV-ELKTCT 318
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLNLS 422
+ LS N++ +P A L +L L+L N + + + S+I + +N N
Sbjct: 319 QITKADLSNNKLSQ-FPYALCALSDLKYLNLSGNSISELIPGI-SDIKDLEHLELNKNKL 376
Query: 423 NNY------ITNL-Y----ENDKKQAPIYI---KSLD---LSNNRIQEVPVNFLQTFADS 465
+++ +T L Y EN+ P + K+L L +N+ P
Sbjct: 377 SSFSACLCSLTKLVYLDVSENEINSLPAVVSEMKALQVLLLHHNKFGSFPEELCSL--KG 434
Query: 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT--FIGMPNLQIIDLSFNE 523
L+ L + N+IK + L+ ++ L++ +N A + L + ++ +
Sbjct: 435 LKTLDISNNQIKTIPLK-ISRLETIKDLNVSNNQFASFPSEICHLSSLEKLTVCQMNGLK 493
Query: 524 ISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
++ + E+ LR L+ISHN L+ +P +
Sbjct: 494 LTKIP-EELSKLVSLRELDISHNALKEMPDSI 524
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 125/576 (21%), Positives = 253/576 (43%)
Query: 3 LDLSHNKLSVL--NMATLYS-NVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFI 59
L L N+L+ L ++ L+ V + H + L ++L + N ++EL + ++
Sbjct: 50 LILERNRLTQLPPEISLLHKLKVLNVSHNRLSCLP-EELPKLVN--IKELFLNHNNIDEF 106
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY-S 118
P A +++ TL++ +++ L + D ++N++ + +D N++S+ Y
Sbjct: 107 -PFALKSLE-----TLELAGNKLKTLSDTMVD-MKNLKVLNID--SNQISIFPRVLCYLP 157
Query: 119 NVTKL---QHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNN 175
N+ L ++ ++ KD K NK+ L+ LF+ L K +K + ++N
Sbjct: 158 NLVSLSLCENFIQSLPKDI-KGLKKLQEFSVSHNKLMFLSVQLFQ-LTK--LKRLRADDN 213
Query: 176 NEDQVSDREKXXXXXXXXXXRCN---KITD--LNGNLFRHLY----NLQELSLSFNKLQI 226
+ +SD+ + N ITD N + +HL L +L + ++L+
Sbjct: 214 KLEFLSDKVENLRELTFLNLSKNLFKTITDNLCNCTMLKHLILCDNQLTQLPANIDRLKH 273
Query: 227 IE---LNSNVFDVFEKL--QLLEISFSLFNSNEFPYYILN-KNLNTLEWLAMDNNNIKNI 280
++ L+ N + ++ L ++S + N Y + K + + NN +
Sbjct: 274 LKELSLSGNQLNSLDEQISHLKDLSKIELSGNVLTYIPVELKTCTQITKADLSNNKLSQF 333
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE 340
Y+L L+ L Y+NL N IS++ + K L+ + L+ N L S +L +
Sbjct: 334 P-YALCALSDLKYLNLSGNSISELIPGISDI---KDLEHLELNKNKLSSF-SACLCSLTK 388
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
L + +S N + S+ + + ++L N+ +P +L L LD+ +N++K
Sbjct: 389 LVYLDVSENEINSLPAV-VSEMKALQVLLLHHNKFGS-FPEELCSLKGLKTLDISNNQIK 446
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFL 459
L + S + +T +LN+SNN + + + + ++ ++ ++P
Sbjct: 447 TIPLKI-SRL---ETIKDLNVSNNQFASFPSEICHLSSLEKLTVCQMNGLKLTKIPEELS 502
Query: 460 QTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
+ SLR+L + N +K + + G L L L +N I+ + K + + NLQ +DL
Sbjct: 503 KLV--SLRELDISHNALKEMP-DSIGELKYLVHLIANNNEISQLPK-SITSLRNLQHLDL 558
Query: 520 SFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
S N + L + + L+ +N N L +DV
Sbjct: 559 SENRLRYLPAGLRHL-YLLKDINFDGNSLFEPLQDV 593
Score = 188 (71.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 88/360 (24%), Positives = 166/360 (46%)
Query: 223 KLQIIELNSNVFDVFEKLQLLEIS-FSLFNSNEFPYYILN---KNLNTLEWLAMDNNNIK 278
KLQ ++ N +F +QL +++ +++ L+ +NL L +L + N K
Sbjct: 181 KLQEFSVSHNKL-MFLSVQLFQLTKLKRLRADDNKLEFLSDKVENLRELTFLNLSKNLFK 239
Query: 279 NIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
I + +L N T L ++ L N+++++ N+ K LKE+ LS N L ++ + +L
Sbjct: 240 TITD-NLCNCTMLKHLILCDNQLTQLPANIDRL---KHLKELSLSGNQLNSLD-EQISHL 294
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
K+L+ I LS N+L I K + LS N++ +P A L +L L+L N
Sbjct: 295 KDLSKIELSGNVLTYIPV-ELKTCTQITKADLSNNKLSQ-FPYALCALSDLKYLNLSGNS 352
Query: 399 LKDFNLNVFSNITS-KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN 457
+ + + S+I + +N N +++ L K +Y LD+S N I +P
Sbjct: 353 ISELIPGI-SDIKDLEHLELNKNKLSSFSACLCSLTKL---VY---LDVSENEINSLPAV 405
Query: 458 FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
+ A L+ L L N+ +L L+ L + +N I + + + ++ +
Sbjct: 406 VSEMKA--LQVLLLHHNKFGSFPEELC-SLKGLKTLDISNNQIKTIPLK-ISRLETIKDL 461
Query: 518 DLSFNEISMLTGEQFYFSF--KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
++S N+ + E + S KL + ++ +L +P ++ + +LDIS+N K P
Sbjct: 462 NVSNNQFASFPSEICHLSSLEKLTVCQMNGLKLTKIPEELSKLVSLRELDISHNALKEMP 521
Score = 157 (60.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 70/243 (28%), Positives = 119/243 (48%)
Query: 343 TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF 402
T+ LS L+ + ++ + N+ ++L N+IK + N VNL NL L L+ N+L
Sbjct: 3 TLRLSDKGLQDVPLSASET-QNVKTLLLQNNEIKTLRLNT-VNLTNLEILILERNRLTQL 60
Query: 403 NLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTF 462
+ ++ K LN+S+N ++ L E K + IK L L++N I E P F
Sbjct: 61 PPEI--SLLHKLKV--LNVSHNRLSCLPEELPKL--VNIKELFLNHNNIDEFP------F 108
Query: 463 A-DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
A SL L L N++K L T ++ L++L+++ N I++ R +PNL + L
Sbjct: 109 ALKSLETLELAGNKLKTLSDTMV-DMKNLKVLNIDSNQISIF-PRVLCYLPNLVSLSLCE 166
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGRESNP 581
N I L + KL+ ++SHN+L L +F T +++L N+ + + N
Sbjct: 167 NFIQSLPKDIKGLK-KLQEFSVSHNKLMFLSVQLFQLTKLKRLRADDNKLEFLSDKVENL 225
Query: 582 RPI 584
R +
Sbjct: 226 REL 228
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 72/230 (31%), Positives = 115/230 (50%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
Y+NL+ N I I + F H L+ ++LS N + IE F L LNT+ L N L
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRH--LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT 147
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ T +F+ L+ + + L N I+ I AF +P+L +LDL +LK L S
Sbjct: 148 TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL--GELK--RLEYISEAAF 203
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
+ +NL N + NL + A + ++ L+LS NR+ + Q SLRKL+L
Sbjct: 204 EGL-VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLT-SLRKLWLM 261
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
++ ++ AF +L LE L+L HNN+ + F + L+ + L+ N
Sbjct: 262 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 181 (68.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 65/234 (27%), Positives = 118/234 (50%)
Query: 341 LNT--ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+NT + L N ++ I+T +FK+L ++ + LS N ++ I AF LP+L L+L DN+
Sbjct: 86 VNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNR 145
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVN 457
L F ++ + L L NN I ++ + P ++ LDL R++ +
Sbjct: 146 LTTVPTQAFEYLSKLR---ELWLRNNPIESIPSYAFNRVPS-LRRLDLGELKRLEYISEA 201
Query: 458 FLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
+ + LR L L +K + + TA L+ LEL N + ++ +F G+ +L+
Sbjct: 202 AFEGLVN-LRYLNLGMCNLKDIPNLTALVRLEELELSG---NRLDLIRPGSFQGLTSLRK 257
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ L +++ + F L LN+SHN L SLP D+F+ +E++ +++N
Sbjct: 258 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 62/213 (29%), Positives = 105/213 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N I + + F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 96 NGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFE 155
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++ I F ++
Sbjct: 156 Y--LSK-LREL-WLR--NNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 209
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L+ I + T L L + LS N L I+ SF+ L ++ + L Q+
Sbjct: 210 RYLNLGMCN--LKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 265
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
I NAF +L +L +L+L N L ++F+
Sbjct: 266 ATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT 298
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 57/214 (26%), Positives = 99/214 (46%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N ++ I + L SLN + L N+++ + F + +L+E+
Sbjct: 107 KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYL--SKLRELW 164
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I S F + L + L L+ I +F+ L N+ + L +K I P
Sbjct: 165 LRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI-P 223
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
N L L +L+L N+L F +TS + L L + + + N
Sbjct: 224 N-LTALVRLEELELSGNRLDLIRPGSFQGLTSLR---KLWLMHAQVATIERNAFDDLKS- 278
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
++ L+LS+N + +P + L T L +++L+ N
Sbjct: 279 LEELNLSHNNLMSLPHD-LFTPLHRLERVHLNHN 311
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 72/230 (31%), Positives = 115/230 (50%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
Y+NL+ N I I + F H L+ ++LS N + IE F L LNT+ L N L
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRH--LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT 147
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ T +F+ L+ + + L N I+ I AF +P+L +LDL +LK L S
Sbjct: 148 TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL--GELK--RLEYISEAAF 203
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
+ +NL N + NL + A + ++ L+LS NR+ + Q SLRKL+L
Sbjct: 204 EGL-VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLT-SLRKLWLM 261
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
++ ++ AF +L LE L+L HNN+ + F + L+ + L+ N
Sbjct: 262 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 181 (68.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 65/234 (27%), Positives = 118/234 (50%)
Query: 341 LNT--ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+NT + L N ++ I+T +FK+L ++ + LS N ++ I AF LP+L L+L DN+
Sbjct: 86 VNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNR 145
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVN 457
L F ++ + L L NN I ++ + P ++ LDL R++ +
Sbjct: 146 LTTVPTQAFEYLSKLR---ELWLRNNPIESIPSYAFNRVPS-LRRLDLGELKRLEYISEA 201
Query: 458 FLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
+ + LR L L +K + + TA L+ LEL N + ++ +F G+ +L+
Sbjct: 202 AFEGLVN-LRYLNLGMCNLKDIPNLTALVRLEELELSG---NRLDLIRPGSFQGLTSLRK 257
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ L +++ + F L LN+SHN L SLP D+F+ +E++ +++N
Sbjct: 258 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 62/213 (29%), Positives = 105/213 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N I + + F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 96 NGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFE 155
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++ I F ++
Sbjct: 156 Y--LSK-LREL-WLR--NNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 209
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L+ I + T L L + LS N L I+ SF+ L ++ + L Q+
Sbjct: 210 RYLNLGMCN--LKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 265
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
I NAF +L +L +L+L N L ++F+
Sbjct: 266 ATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT 298
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 57/214 (26%), Positives = 99/214 (46%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N ++ I + L SLN + L N+++ + F + +L+E+
Sbjct: 107 KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYL--SKLRELW 164
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I S F + L + L L+ I +F+ L N+ + L +K I P
Sbjct: 165 LRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI-P 223
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
N L L +L+L N+L F +TS + L L + + + N
Sbjct: 224 N-LTALVRLEELELSGNRLDLIRPGSFQGLTSLR---KLWLMHAQVATIERNAFDDLKS- 278
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
++ L+LS+N + +P + L T L +++L+ N
Sbjct: 279 LEELNLSHNNLMSLPHD-LFTPLHRLERVHLNHN 311
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 72/230 (31%), Positives = 115/230 (50%)
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
Y+NL+ N I I + F H L+ ++LS N + IE F L LNT+ L N L
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRH--LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT 147
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
++ T +F+ L+ + + L N I+ I AF +P+L +LDL +LK L S
Sbjct: 148 TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL--GELK--RLEYISEAAF 203
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
+ +NL N + NL + A + ++ L+LS NR+ + Q SLRKL+L
Sbjct: 204 EGL-VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLT-SLRKLWLM 261
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
++ ++ AF +L LE L+L HNN+ + F + L+ + L+ N
Sbjct: 262 HAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 181 (68.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 65/234 (27%), Positives = 118/234 (50%)
Query: 341 LNT--ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+NT + L N ++ I+T +FK+L ++ + LS N ++ I AF LP+L L+L DN+
Sbjct: 86 VNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNR 145
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVN 457
L F ++ + L L NN I ++ + P ++ LDL R++ +
Sbjct: 146 LTTVPTQAFEYLSKLR---ELWLRNNPIESIPSYAFNRVPS-LRRLDLGELKRLEYISEA 201
Query: 458 FLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
+ + LR L L +K + + TA L+ LEL N + ++ +F G+ +L+
Sbjct: 202 AFEGLVN-LRYLNLGMCNLKDIPNLTALVRLEELELSG---NRLDLIRPGSFQGLTSLRK 257
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
+ L +++ + F L LN+SHN L SLP D+F+ +E++ +++N
Sbjct: 258 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 62/213 (29%), Positives = 105/213 (49%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N I + + F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 96 NGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFE 155
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++ I F ++
Sbjct: 156 Y--LSK-LREL-WLR--NNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 209
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L+ I + T L L + LS N L I+ SF+ L ++ + L Q+
Sbjct: 210 RYLNLGMCN--LKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 265
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
I NAF +L +L +L+L N L ++F+
Sbjct: 266 ATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT 298
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 57/214 (26%), Positives = 99/214 (46%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N ++ I + L SLN + L N+++ + F + +L+E+
Sbjct: 107 KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYL--SKLRELW 164
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I S F + L + L L+ I +F+ L N+ + L +K I P
Sbjct: 165 LRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI-P 223
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
N L L +L+L N+L F +TS + L L + + + N
Sbjct: 224 N-LTALVRLEELELSGNRLDLIRPGSFQGLTSLR---KLWLMHAQVATIERNAFDDLKS- 278
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
++ L+LS+N + +P + L T L +++L+ N
Sbjct: 279 LEELNLSHNNLMSLPHD-LFTPLHRLERVHLNHN 311
>UNIPROTKB|E1C5R1 [details] [associations]
symbol:LOC428618 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0000122 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030512 GO:GO:0005614
GeneTree:ENSGT00700000104286 OMA:RRLYISH EMBL:AADN02001982
IPI:IPI00573069 RefSeq:XP_426175.3 ProteinModelPortal:E1C5R1
Ensembl:ENSGALT00000024034 GeneID:428618 KEGG:gga:428618
Uniprot:E1C5R1
Length = 512
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 100/373 (26%), Positives = 178/373 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
+KI L FR + L+EL LS + + IE +N F L+ LE+ + + P
Sbjct: 57 SKIKQLQITDFRRMSALEELVLSCSGTESIE--NNTFKALSSLKSLELYKNQLK--QIPI 112
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++ + LE L + +N+I + L L +++ N I+ + ++ F + L
Sbjct: 113 FLPSG----LEILKLADNSINTLHATDFEGLVKLRVLDIRNNLIATLPSSAFSSLCN--L 166
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L N +E + + L L ++++ N L S+ + F + N+ + LS N +
Sbjct: 167 QSLILDGNNMEFVSAPL--KLPRLKYLSMADNRLNSLPASFFASFGNLQFLSLSGNFLTK 224
Query: 378 I---YPNAFVNLP---NLVK-LDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYIT-N 428
+ P + ++L N +K + LQD K + NL+ F ++ T ++ +L N T
Sbjct: 225 VPLDLPKSLLSLKLDKNQLKTVQLQDMKHLE-NLSEFFLSENQLTSVDGAHLLPNLTTLE 283
Query: 429 LYENDKKQAPIYI----KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF 484
L +N + P+ + + LD SNN IQ V Q D L+ L+LD N + +A A
Sbjct: 284 LSKNQLQALPLRLPGRLQKLDCSNNLIQRVTAQEFQGLQD-LKHLFLDNNAVSMFEAGAL 342
Query: 485 GNLDVLELLSLEHNNIAVVVKRTFIGMPN-LQIIDLSFNEISMLTGEQFYFSFK-LRILN 542
+ L L+LE N + + R +P+ L +DL N+I + GEQ K L++LN
Sbjct: 343 QHCAQLSNLALEQNLLISIPLR----LPDTLARLDLKGNDIEDV-GEQELKDLKQLQVLN 397
Query: 543 ISHNRLRSLPRDV 555
+ +N++ +L R V
Sbjct: 398 LRNNKISALDRKV 410
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 82/328 (25%), Positives = 157/328 (47%)
Query: 214 LQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMD 273
L+ L L+ N + L++ F+ KL++L+I +L + P + N L+ L +D
Sbjct: 118 LEILKLADNSINT--LHATDFEGLVKLRVLDIRNNLIAT--LPSSAFSSLCN-LQSLILD 172
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF-HFNIHKRLKEIRLSNNYLELIES 332
NN++ + + L L Y+++ N+++ + + F F L+ + LS N+L +
Sbjct: 173 GNNMEFVS--APLKLPRLKYLSMADNRLNSLPASFFASFG---NLQFLSLSGNFLTKVPL 227
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
D K L ++ L N LK+++ K+L N+ LS NQ+ + A + LPNL L
Sbjct: 228 DL---PKSLLSLKLDKNQLKTVQLQDMKHLENLSEFFLSENQLTSV-DGAHL-LPNLTTL 282
Query: 393 DLQDNKLK-------------DFNLNVFSNITSK-----QTPMNLNLSNNYITNLYENDK 434
+L N+L+ D + N+ +T++ Q +L L NN ++ ++E
Sbjct: 283 ELSKNQLQALPLRLPGRLQKLDCSNNLIQRVTAQEFQGLQDLKHLFLDNNAVS-MFEAGA 341
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
Q + +L L N + +P+ D+L +L L N+I+ + +L L++L+
Sbjct: 342 LQHCAQLSNLALEQNLLISIPLRL----PDTLARLDLKGNDIEDVGEQELKDLKQLQVLN 397
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
L +N I+ + ++ +P L+ + L N
Sbjct: 398 LRNNKISALDRKVLEYLPRLRHLYLDGN 425
Score = 156 (60.0 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 58/226 (25%), Positives = 108/226 (47%)
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
+S++ +K ++ T F+ ++ + +VLS + + I N F L +L L+L N+LK +
Sbjct: 54 ISHSKIKQLQITDFRRMSALEELVLSCSGTESIENNTFKALSSLKSLELYKNQLKQIPIF 113
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADS 465
+ S + L L++N I L+ D + + ++ LD+ NN I +P + + +
Sbjct: 114 LPSGLEI------LKLADNSINTLHATDF-EGLVKLRVLDIRNNLIATLPSSAFSSLCN- 165
Query: 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
L+ L LD N ++ + A L L+ LS+ N + + F NLQ + LS N
Sbjct: 166 LQSLILDGNNMEFVSAPL--KLPRLKYLSMADNRLNSLPASFFASFGNLQFLSLSGN--- 220
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLP-RDVFSNTIIEKLDISYNQ 570
LT L L + N+L+++ +D+ + + +S NQ
Sbjct: 221 FLTKVPLDLPKSLLSLKLDKNQLKTVQLQDMKHLENLSEFFLSENQ 266
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 63/251 (25%), Positives = 118/251 (47%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN--EFPYYILNKNL--NT 266
L L+ LS++ N+L L ++ F F LQ L +S + + P +L+ L N
Sbjct: 185 LPRLKYLSMADNRLN--SLPASFFASFGNLQFLSLSGNFLTKVPLDLPKSLLSLKLDKNQ 242
Query: 267 LEWLAM-DNNNIKNIRNYSLYN--LTSLNYINLEYN----KISKIHNNLFHFNIHKRLKE 319
L+ + + D +++N+ + L LTS++ +L N ++SK + RL++
Sbjct: 243 LKTVQLQDMKHLENLSEFFLSENQLTSVDGAHLLPNLTTLELSKNQLQALPLRLPGRLQK 302
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ SNN ++ + + F L++L + L N + + + ++ + N+ L N + I
Sbjct: 303 LDCSNNLIQRVTAQEFQGLQDLKHLFLDNNAVSMFEAGALQHCAQLSNLALEQNLLISI- 361
Query: 380 PNAFVNLPN-LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
P + LP+ L +LDL+ N ++D ++ Q LNL NN I+ L + P
Sbjct: 362 P---LRLPDTLARLDLKGNDIEDVGEQELKDLKQLQV---LNLRNNKISALDRKVLEYLP 415
Query: 439 IYIKSLDLSNN 449
++ L L N
Sbjct: 416 -RLRHLYLDGN 425
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 68/274 (24%), Positives = 129/274 (47%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + +S++ ++ ++ F + L + LS + +SI+ +FK L+++ ++ L NQ+K
Sbjct: 50 RRLYISHSKIKQLQITDFRRMSALEELVLSCSGTESIENNTFKALSSLKSLELYKNQLKQ 109
Query: 378 IYPNAFVNLPN-LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT--------- 427
I P + LP+ L L L DN + + F + + L++ NN I
Sbjct: 110 I-P---IFLPSGLEILKLADNSINTLHATDFEGLVKLRV---LDIRNNLIATLPSSAFSS 162
Query: 428 --NLYE-----NDKK--QAPIYI---KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
NL N+ + AP+ + K L +++NR+ +P +F +F + L+ L L N
Sbjct: 163 LCNLQSLILDGNNMEFVSAPLKLPRLKYLSMADNRLNSLPASFFASFGN-LQFLSLSGNF 221
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
+ + +L L L L+ N + V + + NL LS N+++ + G +
Sbjct: 222 LTKVPLDLPKSL--LSL-KLDKNQLKTVQLQDMKHLENLSEFFLSENQLTSVDGAHLLPN 278
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
L L +S N+L++LP + ++KLD S N
Sbjct: 279 --LTTLELSKNQLQALPLRLPGR--LQKLDCSNN 308
Score = 120 (47.3 bits), Expect = 0.00060, P = 0.00060
Identities = 74/302 (24%), Positives = 128/302 (42%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
T L + ++ IK ++ +++L + L + I NN F LK + L N
Sbjct: 48 TTRRLYISHSKIKQLQITDFRRMSALEELVLSCSGTESIENNTF--KALSSLKSLELYKN 105
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
L+ I + L + L+ N + ++ T F+ L + + + N I + +AF +
Sbjct: 106 QLKQIP---IFLPSGLEILKLADNSINTLHATDFEGLVKLRVLDIRNNLIATLPSSAFSS 162
Query: 386 LPNLVKLDLQDN------------KLK-----DFNLNVF--SNITSKQTPMNLNLSNNYI 426
L NL L L N +LK D LN S S L+LS N++
Sbjct: 163 LCNLQSLILDGNNMEFVSAPLKLPRLKYLSMADNRLNSLPASFFASFGNLQFLSLSGNFL 222
Query: 427 TNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD-ATAFG 485
T + P + SL L N+++ V + ++ ++L + +L N++ +D A
Sbjct: 223 TKV----PLDLPKSLLSLKLDKNQLKTVQLQDMKHL-ENLSEFFLSENQLTSVDGAHLLP 277
Query: 486 NLDVLELLSLEHNNIAVVVKRTFIGMPN-LQIIDLSFNEISMLTGEQFYFSFKLRILNIS 544
NL LEL N + + R +P LQ +D S N I +T ++F L+ L +
Sbjct: 278 NLTTLEL---SKNQLQALPLR----LPGRLQKLDCSNNLIQRVTAQEFQGLQDLKHLFLD 330
Query: 545 HN 546
+N
Sbjct: 331 NN 332
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 227 (85.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 76/262 (29%), Positives = 136/262 (51%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ N+++ ++ L L ++ L++N IS I N F N +RLKE+ LS+N +
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAF--NGIRRLKELILSSNRISY 123
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
++TF + L + LSYN L S+ + F+ L +L++ L N ++ I F + NL
Sbjct: 124 FLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNL 183
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP--IYIKSLDLS 447
LDL N+++ NVF+ + + L+L +N + L + P + +++L +
Sbjct: 184 ELLDLGYNRIRSLARNVFAGMIRLK---ELHLEHNQFSKL---NLALFPRLVSLQNLYMQ 237
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA-TAFGNLDVLELLSLEHNNIAVVVKR 506
N+I + T++ SL++L L NEI+ + F + L+ L+L+ N K
Sbjct: 238 WNKISVIGQTMSWTWS-SLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSN------KL 290
Query: 507 TFIGMPNLQIID--LSFNEISM 526
TFIG +I+D +S N+IS+
Sbjct: 291 TFIGQ---EILDSWISLNDISL 309
Score = 221 (82.9 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 72/255 (28%), Positives = 123/255 (48%)
Query: 245 ISFSL-FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISK 303
+ SL +NS + Y K LN L WL +D+N+I NI + + L + L N+IS
Sbjct: 64 LGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISY 123
Query: 304 IHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
NN F + L+ + LS N L + S+ F L++L ++ L N L++I F++
Sbjct: 124 FLNNTFRPVTN--LRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCR 181
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N+ + L +N+I+ + N F + L +L L+ N+ NL +F + S Q NL +
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQ---NLYMQW 238
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N I+ + + ++ LDLS N I+ + +L++L LD N++ +
Sbjct: 239 NKISVIGQT-MSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEI 297
Query: 484 FGNLDVLELLSLEHN 498
+ L +SL N
Sbjct: 298 LDSWISLNDISLAGN 312
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 62/242 (25%), Positives = 116/242 (47%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N L+ ++ + F L +L + L +N + +I +F + + ++LS N+I Y
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
N F + NL LDL N+L F + ++L+L +N + + +
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKL---LSLHLRSNSLRTIPVRIFQDCR- 181
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ LDL NRI+ + N L++L+L+ N+ L+ F L L+ L ++ N
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMI-RLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNK 240
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF-KLRILNISHNRLRSLPRDVFSN 558
I+V+ + +LQ +DLS NEI +G + L+ LN+ N+L + +++ +
Sbjct: 241 ISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDS 300
Query: 559 TI 560
I
Sbjct: 301 WI 302
Score = 179 (68.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/128 (35%), Positives = 71/128 (55%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N +Q++ N + + L LYLD N I ++D AF + L+ L L N I+
Sbjct: 66 LSLRYNSLQKLKYNQFKGL-NQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYF 124
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IE 562
+ TF + NL+ +DLS+N++ L EQF KL L++ N LR++P +F + +E
Sbjct: 125 LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 563 KLDISYNQ 570
LD+ YN+
Sbjct: 185 LLDLGYNR 192
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 63/259 (24%), Positives = 113/259 (43%)
Query: 217 LSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFPYYILNKNLNTLEWLAMDNN 275
LSL +N LQ +L N F +L L + + + N +E + + L+ L + +N
Sbjct: 66 LSLRYNSLQ--KLKYNQFKGLNQLTWLYLDHNHISNIDENAF----NGIRRLKELILSSN 119
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
I N + +T+L ++L YN++ + + F + K L + L +N L I F
Sbjct: 120 RISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFR-GLRKLLS-LHLRSNSLRTIPVRIF 177
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
+ + L + L YN ++S+ F + + + L NQ + F L +L L +Q
Sbjct: 178 QDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQ 237
Query: 396 DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
NK+ + +S Q L+LS N I Q ++ L+L +N++ +
Sbjct: 238 WNKISVIGQTMSWTWSSLQ---RLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIG 294
Query: 456 VNFLQTFADSLRKLYLDFN 474
L ++ SL + L N
Sbjct: 295 QEILDSWI-SLNDISLAGN 312
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 56/234 (23%), Positives = 104/234 (44%)
Query: 147 RCNKITDLNGNLFRHL-QKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG 205
R N + L N F+ L Q + + N+ +N D+ + N+I+
Sbjct: 69 RYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDE--NAFNGIRRLKELILSSNRISYFLN 126
Query: 206 NLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
N FR + NL+ L LS+N+L L S F KL L + + + P I ++
Sbjct: 127 NTFRPVTNLRNLDLSYNQLH--SLGSEQFRGLRKLLSLHLRSNSLRT--IPVRIF-QDCR 181
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
LE L + N I+++ + L ++LE+N+ SK++ LF + L+ + + N
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVS--LQNLYMQWN 239
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTS-FKNLNNMLNIVLSFNQIKYI 378
+ +I + L + LS N +++ S F+ + N+ + L N++ +I
Sbjct: 240 KISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFI 293
Score = 84 (34.6 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 46/174 (26%), Positives = 81/174 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+ + LN LF L +LQ L + +NK+ +I + + LQ L++S + + P
Sbjct: 215 NQFSKLNLALFPRLVSLQNLYMQWNKISVI--GQTMSWTWSSLQRLDLSGNEIEAFSGPS 272
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF-NIHKR 316
+ + L+ L +D+N + I L + SLN I+L N I + N+ N K
Sbjct: 273 VF--QCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGN-IWECSRNICSLVNWLKS 329
Query: 317 LKEIRLSNNYL-----EL-----IESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
K +R N L EL I++ Y++ +T T ++L +++ +FK
Sbjct: 330 FKGLR-ENTILCASPKELQGVNVIDAVKNYSICGKSTTTERFDLARALPKPTFK 382
Score = 83 (34.3 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTI-----LKGDQLQGIFNSKLRELEITGKDLK 57
L LS N++S + + VT L++L + L +Q +G+ KL L + L+
Sbjct: 114 LILSSNRISYF-LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGL--RKLLSLHLRSNSLR 170
Query: 58 FIDPSAFDNIDACYDLTL-KITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATL 116
I F + C +L L + +I L +F + +++ L L HN+ S LN+A L
Sbjct: 171 TIPVRIFQD---CRNLELLDLGYNRIRSLARNVFAGMIRLKE--LHLEHNQFSKLNLA-L 224
Query: 117 YSNVTKLQHL 126
+ + LQ+L
Sbjct: 225 FPRLVSLQNL 234
>TAIR|locus:2155909 [details] [associations]
symbol:RLP56 "AT5G49290" species:3702 "Arabidopsis
thaliana" [GO:0007165 "signal transduction" evidence=IC]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002688
InterPro:IPR013210 Pfam:PF08263 IPI:IPI00518781 RefSeq:NP_199740.4
UniGene:At.55450 ProteinModelPortal:F4K4T3 SMR:F4K4T3
EnsemblPlants:AT5G49290.1 GeneID:834989 KEGG:ath:AT5G49290
OMA:RCEECEY ArrayExpress:F4K4T3 Uniprot:F4K4T3
Length = 908
Score = 230 (86.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 106/382 (27%), Positives = 182/382 (47%)
Query: 199 KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKL---QLLEISFSLFNSNEF 255
+I+ LN +L ++ L LS ++L + + + +L Q+L S + FN++ F
Sbjct: 79 EISLLNLSLLHPFEEVRSLDLSNSRLNGLVDDVEGYKSLRRLRNLQILNFSSNEFNNSIF 138
Query: 256 PYYILNKNLNTLEWLAMDNNNIKN-IRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
P+ LN +L L++ NN+ I L NLT+L ++L N+I + F
Sbjct: 139 PF--LNA-ATSLTTLSLRRNNMYGPIPLKELKNLTNLELLDLSGNRIDG-SMPVREFPYL 194
Query: 315 KRLKEIRLSNNYL-ELIESDTFYNLKELNTITL-SYNLLKSIKTTSFKNLNNMLNIVLSF 372
K+LK + LS+N + +E F +K L + L N + + F NLN + + LS
Sbjct: 195 KKLKALDLSSNGIYSSMEWQVFCEMKNLQELDLRGINFVGQLPLC-FGNLNKLRFLDLSS 253
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDF-NLNVFSNITSKQTPMNLNLSNNYITNLYE 431
NQ+ P +F +L +L L L DN + F +LN +N+T K + ++ + E
Sbjct: 254 NQLTGNIPPSFSSLESLEYLSLSDNSFEGFFSLNPLTNLT-KLKVFIFSSKDDMVQVKIE 312
Query: 432 NDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT-AFGNLDV 489
+ + P++ + L L ++++P NFL + +L + L N I + T N
Sbjct: 313 STWQ--PLFQLSVLVLRLCSLEKIP-NFLM-YQKNLHVVDLSGNRISGIIPTWLLENNPE 368
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF-KLRILNISHNRL 548
LE+L L++N+ + T + NLQ++D S N I L + F L +N S+N
Sbjct: 369 LEVLQLKNNSFTIFQMPTSVH--NLQVLDFSENNIGGLFPDNFGRVLPNLVHMNGSNNGF 426
Query: 549 R-SLPRDVFSNTIIEKLDISYN 569
+ + P + I LD+SYN
Sbjct: 427 QGNFPSSMGEMYNISFLDLSYN 448
Score = 160 (61.4 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 144/604 (23%), Positives = 253/604 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKG-DQLQGIFNS--KLRELEITGKDLKFI 59
LDLS N + ++ + LQ L + QL F + KLR L+++ L
Sbjct: 200 LDLSSNGIYSSMEWQVFCEMKNLQELDLRGINFVGQLPLCFGNLNKLRFLDLSSNQLTGN 259
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
P +F ++++ L+L ++ E S + + N+ ++ + + +K ++ + + S
Sbjct: 260 IPPSFSSLESLEYLSL--SDNSFEGFFS--LNPLTNLTKLKVFIFSSKDDMVQVK-IEST 314
Query: 120 VTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQ 179
L L +L+ + + DL+GN I+ NN E +
Sbjct: 315 WQPLFQLSVLVLRLCSLEKIPNFLMYQKNLHVVDLSGNRI----SGIIPTWLLENNPELE 370
Query: 180 VSDREKXXXXXXXXXXRCNKITDLN------GNLF-----RHLYNLQELSLSFNKLQIIE 228
V + + + L+ G LF R L NL ++ S N Q
Sbjct: 371 VLQLKNNSFTIFQMPTSVHNLQVLDFSENNIGGLFPDNFGRVLPNLVHMNGSNNGFQG-N 429
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
S++ +++ + L++S++ S E P ++ + L L + +N N
Sbjct: 430 FPSSMGEMYN-ISFLDLSYNNL-SGELPQSFVSSCFS-LSILQLSHNKFSGHFLPRQTNF 486
Query: 289 TSLNYINLEYNKIS-KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
TSL + + N + KI L L + +SNN+LE + LN + LS
Sbjct: 487 TSLIVLRINNNLFTGKIGVGLLTL---VDLCILDMSNNFLEGELPPLLLVFEYLNFLDLS 543
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
NLL S +L+N+L L N P+ F L ++ LDL++NKL N+ F
Sbjct: 544 GNLLSGA-LPSHVSLDNVL--FLHNNNFTGPIPDTF--LGSIQILDLRNNKLSG-NIPQF 597
Query: 408 SNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE-VPVNFLQ-TFADS 465
Q L L N +T + + ++ LDLS+N++ +P F +F +
Sbjct: 598 ---VDTQDISFLLLRGNSLTGYIPSTLCEFS-KMRLLDLSDNKLNGFIPSCFNNLSFGLA 653
Query: 466 LRKLYLDFNEIKHLDATAFG---NLDVLELLSLEHNN-----IAVVVKR---TFIG---- 510
++ ++ L++ G + V+E L+++N + K+ ++IG
Sbjct: 654 RKEEITNYYVAVALESFYLGFYKSTFVVENFRLDYSNYFEIDVKFATKQRYDSYIGAFQF 713
Query: 511 ----MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLD 565
+ ++ +DLS NE+S + + FKLR LN+SHN L S D FS IE LD
Sbjct: 714 SEGTLNSMYGLDLSSNELSGVIPAELGDLFKLRALNLSHNFLSSHIPDSFSKLQDIESLD 773
Query: 566 ISYN 569
+SYN
Sbjct: 774 LSYN 777
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 135/595 (22%), Positives = 239/595 (40%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFN-------SKLRELEITGKD 55
LDLS N+L+ N+ +S++ L++L L + +G F+ +KL+ + KD
Sbjct: 249 LDLSSNQLTG-NIPPSFSSLESLEYLS---LSDNSFEGFFSLNPLTNLTKLKVFIFSSKD 304
Query: 56 LKFIDPSAFDNIDACYDLTLKITNT-QIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMA 114
+ + L++ + +E++P+ L + +N+ +DLS N++S +
Sbjct: 305 -DMVQVKIESTWQPLFQLSVLVLRLCSLEKIPNFLMYQ-KNLH--VVDLSGNRISGIIPT 360
Query: 115 TLYSN-----VTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKA 169
L N V +L++ TI + N I L + F + ++V
Sbjct: 361 WLLENNPELEVLQLKNNSFTIFQMPTSVHNLQVLDFSE-NNIGGLFPDNFGRVLPNLVHM 419
Query: 170 KKNNNNNEDQVSDREKXXXXXXXXXXRCNKIT-DLNGNLFRHLYNLQELSLSFNKLQ--I 226
+NN + N ++ +L + ++L L LS NK
Sbjct: 420 NGSNNGFQGNFPSSMGEMYNISFLDLSYNNLSGELPQSFVSSCFSLSILQLSHNKFSGHF 479
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
+ +N F L +L I+ +LF + + +L L L L M NN ++ L
Sbjct: 480 LPRQTN----FTSLIVLRINNNLF-TGKIGVGLLT--LVDLCILDMSNNFLEGELPPLLL 532
Query: 287 NLTSLNYINLEYNKISK-------------IHNNLFHFNIHKR-LKEIR---LSNNYLEL 329
LN+++L N +S +HNN F I L I+ L NN L
Sbjct: 533 VFEYLNFLDLSGNLLSGALPSHVSLDNVLFLHNNNFTGPIPDTFLGSIQILDLRNNKLSG 592
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP-N 388
F + ++++ + L N L ++ + M + LS N++ P+ F NL
Sbjct: 593 -NIPQFVDTQDISFLLLRGNSLTGYIPSTLCEFSKMRLLDLSDNKLNGFIPSCFNNLSFG 651
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L + + N L F K T + N +Y +N +E D K A + D
Sbjct: 652 LARKEEITNYYVAVALESFYLGFYKSTFVVENFRLDY-SNYFEIDVKFATK--QRYDSYI 708
Query: 449 NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
Q F + +S+ L L NE+ + G+L L L+L HN ++ + +F
Sbjct: 709 GAFQ-----FSEGTLNSMYGLDLSSNELSGVIPAELGDLFKLRALNLSHNFLSSHIPDSF 763
Query: 509 IGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PRDVFSNTIIE 562
+ +++ +DLS+N + Q L I N+S+N L + P+ NT E
Sbjct: 764 SKLQDIESLDLSYNMLQGSIPHQLTNLTSLAIFNVSYNNLSGIIPQGKQFNTFDE 818
Score = 121 (47.7 bits), Expect = 0.00099, P = 0.00099
Identities = 81/347 (23%), Positives = 146/347 (42%)
Query: 224 LQIIELNSNVFDVFEKLQLLEISFSLFNS--NEFPYYILNKNLNTLEWLAMDNNNIKNIR 281
L+I LN ++ FE+++ L++S S N ++ Y + L L+ L +N N
Sbjct: 78 LEISLLNLSLLHPFEEVRSLDLSNSRLNGLVDDVEGYKSLRRLRNLQILNFSSNEFNNSI 137
Query: 282 NYSLYNLTSLNYINLEYNKI-SKIHNNLFHFNIHKRLKEIRLSNNYLE-LIESDTFYNLK 339
L TSL ++L N + I L L+ + LS N ++ + F LK
Sbjct: 138 FPFLNAATSLTTLSLRRNNMYGPIP--LKELKNLTNLELLDLSGNRIDGSMPVREFPYLK 195
Query: 340 ELNTITLSYN-LLKSIKTTSFKNLNNMLNIVL-SFNQIKYIYPNAFVNLPNLVKLDLQDN 397
+L + LS N + S++ F + N+ + L N + + P F NL L LDL N
Sbjct: 196 KLKALDLSSNGIYSSMEWQVFCEMKNLQELDLRGINFVGQL-PLCFGNLNKLRFLDLSSN 254
Query: 398 KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN 457
+L N+ + +S ++ L+LS+N + + +K S+ + V V
Sbjct: 255 QLTG---NIPPSFSSLESLEYLSLSDNSFEGFFSLNPLTNLTKLKVFIFSS-KDDMVQVK 310
Query: 458 FLQTFAD--SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI-GMPNL 514
T+ L L L ++ + + L ++ L N I+ ++ + P L
Sbjct: 311 IESTWQPLFQLSVLVLRLCSLEKIPNFLMYQKN-LHVVDLSGNRISGIIPTWLLENNPEL 369
Query: 515 QIIDLSFNEISMLTGEQFYFSF-KLRILNISHNRLRSLPRDVFSNTI 560
+++ L N ++ Q S L++L+ S N + L D F +
Sbjct: 370 EVLQLKNNSFTIF---QMPTSVHNLQVLDFSENNIGGLFPDNFGRVL 413
>MGI|MGI:1858171 [details] [associations]
symbol:Tlr5 "toll-like receptor 5" species:10090 "Mus
musculus" [GO:0005149 "interleukin-1 receptor binding"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=ISO] [GO:0034123 "positive regulation of
toll-like receptor signaling pathway" evidence=ISO] [GO:0045087
"innate immune response" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027176 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 MGI:MGI:1858171 GO:GO:0016021
GO:GO:0007165 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 GO:GO:0005622
SUPFAM:SSF52200 CTD:7100 eggNOG:NOG271351 HOGENOM:HOG000008675
HOVERGEN:HBG023182 KO:K10168 OrthoDB:EOG4BZN24
PANTHER:PTHR24365:SF7 EMBL:AF186107 IPI:IPI00674926
RefSeq:NP_058624.2 UniGene:Mm.116894 ProteinModelPortal:Q9JLF7
SMR:Q9JLF7 STRING:Q9JLF7 PhosphoSite:Q9JLF7 PRIDE:Q9JLF7
GeneID:53791 KEGG:mmu:53791 InParanoid:Q9JLF7 NextBio:310633
CleanEx:MM_TLR5 Genevestigator:Q9JLF7 Uniprot:Q9JLF7
Length = 859
Score = 208 (78.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 85/298 (28%), Positives = 149/298 (50%)
Query: 258 YILNKNL-NTLEWLAMDN---NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNI 313
+ LN L TL+ L M N N I I + Y L SL +NL YN + +++N+ F + +
Sbjct: 302 FSLNPRLFGTLKDLKMLNLAFNKINKIGENAFYGLDSLQVLNLSYNLLGELYNSNF-YGL 360
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
R+ + L N++ +I+ TF LK L T+ L N LK+I F + ++ ++L N
Sbjct: 361 -PRVAYVDLQRNHIGIIQDQTFRLLKTLQTLDLRDNALKAI---GF--IPSIQMVLLGGN 414
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
++ ++ P+ N L+L +N+L++ + +++ + Q L L+ N +++
Sbjct: 415 KLVHL-PHIHFTA-NF--LELSENRLENLS-DLYFLLRVPQLQF-LILNQNRLSSCKAAH 468
Query: 434 KKQAPIYIKSLDLSNNRIQEVPVNFL--QTFA--DSLRKLYLDFNEIKHLDATAFGNLDV 489
++ L L+ N +Q L F L+ LYL N + L F +L
Sbjct: 469 TPSENPSLEQLFLTENMLQLAWETGLCWDVFQGLSRLQILYLSNNYLNFLPPGIFNDLVA 528
Query: 490 LELLSLEHNNIAVVVKRTFIGMP-NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
L +LSL N + V+ + +P NL+I+D+S N++ L + FS LR+L+I+HN
Sbjct: 529 LRMLSLSANKLTVLSPGS---LPANLEILDISRNQL--LCPDPALFS-SLRVLDITHN 580
Score = 191 (72.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 86/290 (29%), Positives = 129/290 (44%)
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
+S+ ++L + I ++ LF K LK + L+ N + I + FY L L + LSY
Sbjct: 289 SSVLQLDLSHGFIFSLNPRLF--GTLKDLKMLNLAFNKINKIGENAFYGLDSLQVLNLSY 346
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
NLL + ++F L + + L N I I F L L LDL+DN LK
Sbjct: 347 NLLGELYNSNFYGLPRVAYVDLQRNHIGIIQDQTFRLLKTLQTLDLRDNALKAIGF---- 402
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
I S Q + L N + +L L+LS NR++ + + L+
Sbjct: 403 -IPSIQMVL---LGGNKLVHL-----PHIHFTANFLELSENRLENLSDLYFLLRVPQLQF 453
Query: 469 LYLDFNEIKHLDA--TAFGNLDVLELLSLEHNNIAVVVKR-----TFIGMPNLQIIDLSF 521
L L+ N + A T N LE L L N + + + F G+ LQI+ LS
Sbjct: 454 LILNQNRLSSCKAAHTPSENPS-LEQLFLTENMLQLAWETGLCWDVFQGLSRLQILYLSN 512
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSL-PRDVFSNTIIEKLDISYNQ 570
N ++ L F LR+L++S N+L L P + +N +E LDIS NQ
Sbjct: 513 NYLNFLPPGIFNDLVALRMLSLSANKLTVLSPGSLPAN--LEILDISRNQ 560
Score = 157 (60.3 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 83/301 (27%), Positives = 141/301 (46%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL----FNSNEF 255
I LN LF L +L+ L+L+FNK+ ++ N F + LQ+L +S++L +NSN
Sbjct: 301 IFSLNPRLFGTLKDLKMLNLAFNKIN--KIGENAFYGLDSLQVLNLSYNLLGELYNSN-- 356
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH---------- 305
+Y L + ++ + N+I I++ + L +L ++L N + I
Sbjct: 357 -FY----GLPRVAYVDLQRNHIGIIQDQTFRLLKTLQTLDLRDNALKAIGFIPSIQMVLL 411
Query: 306 --NNLFHF-NIHKRLKEIRLSNNYLELIESDTFYNLK--ELNTITLSYNLLKSIKTTSFK 360
N L H +IH + LS N LE + SD ++ L+ +L + L+ N L S K
Sbjct: 412 GGNKLVHLPHIHFTANFLELSENRLENL-SDLYFLLRVPQLQFLILNQNRLSSCKAAHTP 470
Query: 361 NLNNMLN-IVLSFNQIKYIYP-----NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
+ N L + L+ N ++ + + F L L L L +N L +F+++ + +
Sbjct: 471 SENPSLEQLFLTENMLQLAWETGLCWDVFQGLSRLQILYLSNNYLNFLPPGIFNDLVALR 530
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
L+LS N +T L P ++ LD+S N++ P L F+ SLR L + N
Sbjct: 531 M---LSLSANKLTVLSPGS---LPANLEILDISRNQLL-CPDPAL--FS-SLRVLDITHN 580
Query: 475 E 475
E
Sbjct: 581 E 581
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 79/362 (21%), Positives = 152/362 (41%)
Query: 215 QELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
+ L LSFN + ++ S F + E+LQLLE+ N P +NL L L +
Sbjct: 50 ERLLLSFNYISMVVATS--FPLLERLQLLELGTQYANLTIGPGAF--RNLPNLRILDLGQ 105
Query: 275 NNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE-S 332
+ I+ + + L L + L S + ++ + N++ L + LS N + +
Sbjct: 106 SQIEVLNRDAFQGLPHLLELRLFSCGLSSAVLSDGYFRNLYS-LARLDLSGNQIHSLRLH 164
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
+F L L+ + ++N + +I + L LSF +K F + V
Sbjct: 165 SSFRELNSLSDVNFAFNQIFTICEDELEPLQGK---TLSFFGLKLT--KLFSRVS--VGW 217
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ 452
+ N + L + + ++++ N+ +N+ + + + I + Q
Sbjct: 218 ETCRNPFRGVRLET---LDLSENGWTVDITRNF-SNIIQGSQISSLILKHHIMGPGFGFQ 273
Query: 453 EVPVNFLQTFADSLRK--LYLDFNE--IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
+ TFA R L LD + I L+ FG L L++L+L N I + + F
Sbjct: 274 NIRDPDQSTFASLARSSVLQLDLSHGFIFSLNPRLFGTLKDLKMLNLAFNKINKIGENAF 333
Query: 509 IGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDIS 567
G+ +LQ+++LS+N + L FY ++ +++ N + + F ++ LD+
Sbjct: 334 YGLDSLQVLNLSYNLLGELYNSNFYGLPRVAYVDLQRNHIGIIQDQTFRLLKTLQTLDLR 393
Query: 568 YN 569
N
Sbjct: 394 DN 395
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 96/392 (24%), Positives = 183/392 (46%)
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKL-QLLEIS-FSLFNSNEFPYYILNKNLN 265
FR+L NL+ L L +++++ LN D F+ L LLE+ FS S+ +NL
Sbjct: 92 FRNLPNLRILDLGQSQIEV--LNR---DAFQGLPHLLELRLFSCGLSSAVLSDGYFRNLY 146
Query: 266 TLEWLAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLK--EIRL 322
+L L + N I ++R +S + L SL+ +N +N+I I + K L ++L
Sbjct: 147 SLARLDLSGNQIHSLRLHSSFRELNSLSDVNFAFNQIFTICEDELEPLQGKTLSFFGLKL 206
Query: 323 SNNYLEL-IESDTFYNL---KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ + + + +T N L T+ LS N T +F N ++ +QI +
Sbjct: 207 TKLFSRVSVGWETCRNPFRGVRLETLDLSENGWTVDITRNFSN-------IIQGSQISSL 259
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
+ P Q+ ++D + + F+++ ++ + + L+LS+ +I +L N +
Sbjct: 260 ILKHHIMGPGF---GFQN--IRDPDQSTFASL-ARSSVLQLDLSHGFIFSL--NPRLFGT 311
Query: 439 IY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+ +K L+L+ N+I ++ N DSL+ L L +N + L + F L + + L+
Sbjct: 312 LKDLKMLNLAFNKINKIGENAFYGL-DSLQVLNLSYNLLGELYNSNFYGLPRVAYVDLQR 370
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEIS-----------MLTGEQF----YFSFKLRILN 542
N+I ++ +TF + LQ +DL N + +L G + + F L
Sbjct: 371 NHIGIIQDQTFRLLKTLQTLDLRDNALKAIGFIPSIQMVLLGGNKLVHLPHIHFTANFLE 430
Query: 543 ISHNRLRSLPRDVFSNTIIEKLD-ISYNQDKI 573
+S NRL +L D++ + +L + NQ+++
Sbjct: 431 LSENRLENLS-DLYFLLRVPQLQFLILNQNRL 461
Score = 128 (50.1 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 80/347 (23%), Positives = 150/347 (43%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLL-EISFSLFNSNEFPYYILN 261
L+ FR+LY+L L LS N++ + L+S+ F +L L +++F+ FN + I
Sbjct: 137 LSDGYFRNLYSLARLDLSGNQIHSLRLHSS----FRELNSLSDVNFA-FNQI---FTICE 188
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
L L+ + +K + L++ S+ + N + L ++ + +
Sbjct: 189 DELEPLQGKTLSFFGLKLTK---LFSRVSVGWETCR-NPFRGVR--LETLDLSENGWTVD 242
Query: 322 LSNNYLELIESDTFYNLKELNTIT---LSYNLLKSIKTTSFKNL--NNMLNIVLSFNQIK 376
++ N+ +I+ +L + I + ++ ++F +L +++L + LS I
Sbjct: 243 ITRNFSNIIQGSQISSLILKHHIMGPGFGFQNIRDPDQSTFASLARSSVLQLDLSHGFIF 302
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ P F L +L L+L NK+ N F + S Q LNLS N + LY ++
Sbjct: 303 SLNPRLFGTLKDLKMLNLAFNKINKIGENAFYGLDSLQV---LNLSYNLLGELYNSNFYG 359
Query: 437 APIYIKSLDLSNNRI---QEVPVNFLQT---------------FADSLRKLYLDFNEIKH 478
P + +DL N I Q+ L+T F S++ + L N++ H
Sbjct: 360 LP-RVAYVDLQRNHIGIIQDQTFRLLKTLQTLDLRDNALKAIGFIPSIQMVLLGGNKLVH 418
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
L F + LEL N++ + + +P LQ + L+ N +S
Sbjct: 419 LPHIHF-TANFLELSENRLENLSDLY--FLLRVPQLQFLILNQNRLS 462
Score = 121 (47.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 68/261 (26%), Positives = 120/261 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI + N F L +LQ L+LS+N L + NSN + + ++ +++ + +
Sbjct: 323 NKINKIGENAFYGLDSLQVLNLSYNLLGEL-YNSNFYGL-PRVAYVDLQRNHIGIIQDQT 380
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L K L TL+ + +N +K I + + S+ + L NK+ +H L H IH
Sbjct: 381 FRLLKTLQTLD---LRDNALKAI-GF----IPSIQMVLLGGNKL--VH--LPH--IHFTA 426
Query: 318 KEIRLSNNYLELIESDTFY-NLKELNTITLSYNLLKSIKTTSFKNLNNMLN-IVLSFNQI 375
+ LS N LE + F + +L + L+ N L S K + N L + L+ N +
Sbjct: 427 NFLELSENRLENLSDLYFLLRVPQLQFLILNQNRLSSCKAAHTPSENPSLEQLFLTENML 486
Query: 376 KYIYP-----NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
+ + + F L L L L +N L +F+++ + + L+LS N +T L
Sbjct: 487 QLAWETGLCWDVFQGLSRLQILYLSNNYLNFLPPGIFNDLVALRM---LSLSANKLTVLS 543
Query: 431 ENDKKQAPIYIKSLDLSNNRI 451
P ++ LD+S N++
Sbjct: 544 PGS---LPANLEILDISRNQL 561
Score = 70 (29.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 5 LSHNKLSVLNMATLYSNVTKLQ--HLGTTILKGDQLQGIFNS--KLRELEITGKDLKFID 60
LS N +S++ +AT + + +LQ LGT G F + LR L++ ++ ++
Sbjct: 54 LSFNYISMV-VATSFPLLERLQLLELGTQYANLTIGPGAFRNLPNLRILDLGQSQIEVLN 112
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNV 120
AF + +L L L G F + ++ + LDLS N++ L + + + +
Sbjct: 113 RDAFQGLPHLLELRLFSCGLSSAVLSDGYFRNLYSLAR--LDLSGNQIHSLRLHSSFREL 170
Query: 121 TKL 123
L
Sbjct: 171 NSL 173
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 235 (87.8 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 105/395 (26%), Positives = 179/395 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T + F L++L+ L L N+L+ ++ LQ L + ++N Y
Sbjct: 100 NALTHIPKGAFTGLHSLKVLMLQNNQLR--QVPEEALQNLRSLQSLRL-----DANHISY 152
Query: 258 YILN--KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
+ L++L L +D+N + ++ + +L++L + L NKI I + F N+
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFG-NLSS 211
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L + L NN + + F L L T+ L+YN L T + K L+N+ + N I
Sbjct: 212 -LVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNI 269
Query: 376 KYIYPNAFVNLPNLVKLDLQDN--------------KLKDFNLN------VFSNITSKQT 415
+ I AFV P+L+ + DN +L+ LN F ++T T
Sbjct: 270 RSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEFPHLTGTAT 329
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
+L L+ I++L + Q P ++ LDLS N ++++P + L+K+ L NE
Sbjct: 330 LESLTLTGAKISSLPQAVCDQLP-NLQVLDLSYNLLEDLPS---LSGCQKLQKIDLRHNE 385
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
I + + F L L L+L N IA++ F +P+L +DLS N +S +
Sbjct: 386 IYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTGLH-- 443
Query: 536 FKLRILNISHNR-LRSL-PRDVFSNTIIEKLDISY 568
L L ++ NR L+SL P F I ++ +Y
Sbjct: 444 -GLTHLKLTGNRALQSLIPSANFPELKIIEMPSAY 477
Score = 228 (85.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 73/254 (28%), Positives = 118/254 (46%)
Query: 292 NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+Y++L N IS++ +L H L+E+RL+ N L I F L L + L N L
Sbjct: 69 SYLDLSMNNISQLPASLLHRLCF--LEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQL 126
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNIT 411
+ + + +NL ++ ++ L N I Y+ P+ F L +L L L DN L D + F +++
Sbjct: 127 RQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLS 186
Query: 412 SKQTPMNLNLSN-NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLY 470
+ Q M L L+ ++I + + + L L NNRI + SL L
Sbjct: 187 ALQA-MTLALNKIHHIADYAFGNLSSLVV----LHLHNNRIHSLGKKCFDGL-HSLETLD 240
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE 530
L++N + TA L L+ L NNI + +R F+G P+L I N I +
Sbjct: 241 LNYNNLDEFP-TAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVS 299
Query: 531 QFYFSFKLRILNIS 544
F +LR L ++
Sbjct: 300 AFQHLPELRTLTLN 313
Score = 224 (83.9 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 99/374 (26%), Positives = 168/374 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I+ L +L L L+EL L+ N L I F L++L + + + P
Sbjct: 76 NNISQLPASLLHRLCFLEELRLAGNALTHIP--KGAFTGLHSLKVLMLQNNQLR--QVPE 131
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L +NL +L+ L +D N+I + L SL ++ L+ N ++ + F ++ L
Sbjct: 132 EAL-QNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFR-SL-SAL 188
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L+ N + I F NL L + L N + S+ F L+++ + L++N +
Sbjct: 189 QAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDE 248
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+P A L NL +L N ++ F S T ++ +N I + + +
Sbjct: 249 -FPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLIT---IHFYDNPIQFVGVSAFQHL 304
Query: 438 PIYIKSLDLSN-NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
P +++L L+ + I E P L T +L L L +I L L L++L L
Sbjct: 305 P-ELRTLTLNGASHITEFP--HL-TGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLS 360
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+N + + + G LQ IDL NEI + G F F LR LN++ N++ + + F
Sbjct: 361 YNLLEDLPSLS--GCQKLQKIDLRHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAF 418
Query: 557 SNT-IIEKLDISYN 569
S + KLD+S N
Sbjct: 419 STLPSLIKLDLSSN 432
Score = 197 (74.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 91/373 (24%), Positives = 157/373 (42%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L EL + G L I AF + + L L+ N Q+ ++P + +++ + LD +H
Sbjct: 92 LEELRLAGNALTHIPKGAFTGLHSLKVLMLQ--NNQLRQVPEEALQNLRSLQSLRLDANH 149
Query: 106 NKLSVLNMATLYSNVTKLQHLG------TTILKDREKXXXXXXXXXXRCNKITDLNGNLF 159
+S + + +S + L+HL T + + NKI + F
Sbjct: 150 --ISYVP-PSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAF 206
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSL 219
+L S+V +NN N + + + L NL+EL
Sbjct: 207 GNLS-SLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFP-TAIKTLSNLKELGF 264
Query: 220 SFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKN 279
N ++ I + V + L+ I F N +F ++L L L + N +
Sbjct: 265 HSNNIRSIPERAFVGNP----SLITIHF-YDNPIQFVGVSAFQHLPELRTLTL--NGASH 317
Query: 280 IRNYS-LYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
I + L +L + L KIS + + + L+ + LS N LE + S
Sbjct: 318 ITEFPHLTGTATLESLTLTGAKISSLPQAVC--DQLPNLQVLDLSYNLLEDLPS--LSGC 373
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
++L I L +N + IK ++F+ L N+ ++ L++N+I I+PNAF LP+L+KLDL N
Sbjct: 374 QKLQKIDLRHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNL 433
Query: 399 LKDFNLNVFSNIT 411
L F + +T
Sbjct: 434 LSSFPVTGLHGLT 446
Score = 158 (60.7 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 50/179 (27%), Positives = 86/179 (48%)
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRI 451
LDL N + ++ + + L L+ N +T++ + +K L L NN++
Sbjct: 71 LDLSMNNISQLPASLLHRLCFLE---ELRLAGNALTHIPKGAFTGLHS-LKVLMLQNNQL 126
Query: 452 QEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGM 511
++VP LQ SL+ L LD N I ++ + F L L L L+ N + V + F +
Sbjct: 127 RQVPEEALQNLR-SLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSL 185
Query: 512 PNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDISYN 569
LQ + L+ N+I + F L +L++ +NR+ SL + F +E LD++YN
Sbjct: 186 SALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 244
Score = 127 (49.8 bits), Expect = 0.00022, P = 0.00022
Identities = 37/133 (27%), Positives = 64/133 (48%)
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
++ LDLS N I ++P + L L +L L N + H+ AF L L++L L++N
Sbjct: 66 VFTSYLDLSMNNISQLPASLLHRLC-FLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNN 124
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF-S 557
+ V + + +LQ + L N IS + F LR L + N L +P F S
Sbjct: 125 QLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRS 184
Query: 558 NTIIEKLDISYNQ 570
+ ++ + ++ N+
Sbjct: 185 LSALQAMTLALNK 197
Score = 42 (19.8 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
C DL L + + S L + NI Q+ L H +L L L N L H+
Sbjct: 52 CSDLGLSELPSNLSVFTSYLDLSMNNISQLPASLLH-RLCFLEELRLAGNA--LTHI 105
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 186 (70.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 84/301 (27%), Positives = 130/301 (43%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L ++NN + ++ L L IN NKI+ I F + EI L++N LE
Sbjct: 345 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAG--VNEILLTSNRLE 402
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
++ F L+ L T+ L N + + SF L+++ + L NQI I P AF L +
Sbjct: 403 NVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHS 462
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L L+L N FN N + + +T N + Q P ++K + + +
Sbjct: 463 LSTLNLLANP---FNCNCYLAWLGEWLR-----KKRIVTG---NPRCQKPYFLKEIPIQD 511
Query: 449 NRIQEV------------PVNFLQTFADSLRKLYLDFNEIKHLDATAFG-NLDVLELLSL 495
IQ+ P++ T L + N K L G DV EL L
Sbjct: 512 VAIQDFTCDDGNDDSSCSPLSRCPTECTCLDTVVRCSN--KGLKVLPKGIPRDVTELY-L 568
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
+ N+ +V K + +L +IDLS N IS L+ + F +L L +S+NRLR +P
Sbjct: 569 DGNHFTLVPKELY-NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRT 627
Query: 556 F 556
F
Sbjct: 628 F 628
Score = 166 (63.5 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 274 NNNIKNIRNYSLYNL-TSL----NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + T+L I LE N I I F + +K+L+ I LSNN +
Sbjct: 87 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAF--SPYKKLRRIDLSNNQIS 144
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ D F L+ LN++ L N + + + F+ L ++ ++L+ N+I + +AF +L N
Sbjct: 145 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 204
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
L L L DNKL+ FS + + QT M+L N +I + +
Sbjct: 205 LNLLSLYDNKLQTIAKGTFSPLRAIQT-MHL-AQNPFICDCH 244
Score = 147 (56.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 88/343 (25%), Positives = 146/343 (42%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N+ ++E +F+KL QL +I+FS + E L + +
Sbjct: 344 ELRLNNNEFTVLEATG----IFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEIL-LTS 398
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N ++N+++ L SL + L N+IS + N+ F RL + L +N + I
Sbjct: 399 NRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRL--LSLYDNQIATIAPGA 456
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP-NAFVNLPNLVK-L 392
F L L+T+ NLL + F N N L + + + K I N P +K +
Sbjct: 457 FDTLHSLSTL----NLLAN----PF-NCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEI 507
Query: 393 DLQDNKLKDFNLNVFSNITS----KQTPMNLNLSNNYITNLYENDK---KQAPIYIKSLD 445
+QD ++DF + ++ +S + P + + + K K P + L
Sbjct: 508 PIQDVAIQDFTCDDGNDDSSCSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELY 567
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N VP L + L + L N I L +F N+ L L L +N + +
Sbjct: 568 LDGNHFTLVPKE-LYNYKH-LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 625
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
RTF G+ +L+++ L N+IS++ F L L I N L
Sbjct: 626 RTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPL 668
Score = 135 (52.6 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 297 EYNKISKIHNNLFHF----NIHKRLKEIR---LSNNYLELIESDTFYNLKELNTITLSYN 349
+Y +++NN F I K+L ++R SNN + IE F +N I L+ N
Sbjct: 340 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSN 399
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L++++ FK L ++ ++L N+I + ++F+ L ++ L L DN++ F
Sbjct: 400 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDT 459
Query: 410 ITSKQTPMNLNLSNNYITNLY 430
+ S T +NL L+N + N Y
Sbjct: 460 LHSLST-LNL-LANPFNCNCY 478
Score = 128 (50.1 bits), Expect = 0.00027, P = 0.00027
Identities = 38/133 (28%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P I + L N I+ +P + LR++ L N+I L AF L L L L
Sbjct: 106 PETITEIRLEQNSIKVIPPGAFSPYK-KLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 164
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + K F G+ +LQ++ L+ N+I+ L + F L +L++ N+L+++ + FS
Sbjct: 165 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 224
Query: 558 NT-IIEKLDISYN 569
I+ + ++ N
Sbjct: 225 PLRAIQTMHLAQN 237
Score = 120 (47.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L+ N + + L+++ K L I LSNN + + + +F N+ +L T+ LSYN L+ I
Sbjct: 568 LDGNHFTLVPKELYNY---KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 624
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVFSN 409
+F L ++ + L N I + AF +L L L + N L D N+ S+
Sbjct: 625 PRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSD 679
Score = 118 (46.6 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 414 QTPMNLNLSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
Q L L+NN T L K+ P ++ ++ SNN+I ++ + A + ++ L
Sbjct: 340 QYTAELRLNNNEFTVLEATGIFKKLP-QLRKINFSNNKITDIEEGAFEGAA-GVNEILLT 397
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++++ F L+ L+ L L N I+ V +FIG+ +++++ L N+I+ + F
Sbjct: 398 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAF 457
Query: 533 YFSFKLRILNISHN 546
L LN+ N
Sbjct: 458 DTLHSLSTLNLLAN 471
Score = 112 (44.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 84/351 (23%), Positives = 139/351 (39%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
K + + +NN + D + NKIT+L +LF L++LQ L L+ NK
Sbjct: 131 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 190
Query: 224 LQIIEL-------NSNVFDVFE-KLQLL-EISFSLFNSNEFPYYILNKNLNT--LEWLAM 272
+ + + N N+ +++ KLQ + + +FS + + + N + L+WLA
Sbjct: 191 INCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLA- 249
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
D + I S TS L +I +I + F + K I + +Y +
Sbjct: 250 DYLHTNPIET-SGARCTSPR--RLANKRIGQIKSKKFRCSA-KEQYFIPGTEDYRSKLSG 305
Query: 333 DTFYNLKELNTITLSYNLL--KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA---FVNLP 387
D F +L + + K T + L N ++ A F LP
Sbjct: 306 DCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLP 365
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
L K++ +NK+ D F + L++N + N+ K +K+L L
Sbjct: 366 QLRKINFSNNKITDIEEGAFEGAAGVN---EILLTSNRLENVQHKMFKGLES-LKTLMLR 421
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+NRI V N S+R L L N+I + AF L L L+L N
Sbjct: 422 SNRISCVG-NDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLAN 471
Score = 104 (41.7 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 35/139 (25%), Positives = 65/139 (46%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
++ SN +T + ++ P Y L L+NN + + LRK+ N+I
Sbjct: 324 VDCSNQKLTKIPDH----IPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD 379
Query: 479 LDATAF-GNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
++ AF G V E+L L N + V + F G+ +L+ + L N IS + + F
Sbjct: 380 IEEGAFEGAAGVNEIL-LTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSS 438
Query: 538 LRILNISHNRLRSLPRDVF 556
+R+L++ N++ ++ F
Sbjct: 439 VRLLSLYDNQIATIAPGAF 457
Score = 95 (38.5 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+LYLD N + + N L L+ L +N I+ + ++F M L + LS+N + +
Sbjct: 565 ELYLDGNHFTLVPKELY-NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCI 623
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
F LR+L++ N + +P FS+ + + L I N
Sbjct: 624 PPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGAN 666
Score = 90 (36.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 32/136 (23%), Positives = 64/136 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N+IK I + L I+L N+IS++ + F + + L +
Sbjct: 104 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ-GL-RSLNSLV 161
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + ++ +F++L+N+ + L N+++ I
Sbjct: 162 LYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 221
Query: 382 AFVNLPNLVKLDLQDN 397
F L + + L N
Sbjct: 222 TFSPLRAIQTMHLAQN 237
Score = 78 (32.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 40 GIFN--SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F+ KLR ++++ + + P AF + + L L +I ELP LF+ + +++
Sbjct: 125 GAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY--GNKITELPKSLFEGLFSLQ 182
Query: 98 QMTLDLSH-NKLSV--------LNMATLYSNVTKLQ 124
+ L+ + N L V LN+ +LY N KLQ
Sbjct: 183 LLLLNANKINCLRVDAFQDLHNLNLLSLYDN--KLQ 216
Score = 43 (20.2 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 149 NKITDLNGNLFR---HLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNG 205
NKIT+L +LF LQ ++ A K N D D NK+ +
Sbjct: 165 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD----NKLQTIAK 220
Query: 206 NLFRHLYNLQELSLSFN 222
F L +Q + L+ N
Sbjct: 221 GTFSPLRAIQTMHLAQN 237
>TAIR|locus:2046585 [details] [associations]
symbol:RLP27 "receptor like protein 27" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002685 InterPro:IPR025875 Pfam:PF12799 IPI:IPI00541397
RefSeq:NP_180865.2 UniGene:At.37984 ProteinModelPortal:F4IUU1
SMR:F4IUU1 EnsemblPlants:AT2G33060.1 GeneID:817868
KEGG:ath:AT2G33060 OMA:KFHGPIS Uniprot:F4IUU1
Length = 808
Score = 228 (85.3 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 92/300 (30%), Positives = 147/300 (49%)
Query: 282 NYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN-YLELIESDTFYNLKE 340
N SL+ L L Y+NL N + N++ RL+ + LS+N +L + S +F NL +
Sbjct: 90 NSSLFGLQHLRYLNLSNNNFTSASLPSGFGNLN-RLEVLYLSSNGFLGQVPS-SFSNLSQ 147
Query: 341 LNTITLSYNLLKSIKTTSF---KNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
LN + LS+N L T SF +NL + +VLS+N P++ + LP L LDL++N
Sbjct: 148 LNILDLSHNEL----TGSFPFVQNLTKLSILVLSYNHFSGTIPSSLLTLPFLSSLDLREN 203
Query: 398 KLKDFNLNVFSNITSKQTPMNLNLSNNYITN-LYENDKKQAPIYIKSLDLSNNRIQ-EVP 455
L ++ ++ TS + + L NN+ + E K I +K LDLS + +
Sbjct: 204 YLTG-SIEAPNSSTSSRLEF-MYLGNNHFEGQILEPISKL--INLKHLDLSFLKTSYPID 259
Query: 456 VNFLQTFADSLRKLYLDFNEIKHLDATAFG----NLDVLELLSLEHNNIAVVVKRTFIGM 511
+N +F SL +L L N + T+ NL+ L LLS ++K +
Sbjct: 260 LNLFSSFK-SLVRLVLSGNSLLATSITSDSKIPLNLENLVLLSCGLIEFPTILKN----L 314
Query: 512 PNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP--RDVFSNTIIEKLDISYN 569
L+ IDLS N+I E F+ +LR +N+ +N L +V N+ + LD++YN
Sbjct: 315 TKLEHIDLSNNKIKGKVPEWFWNLPRLRRVNLFNNLFTDLEGSEEVLVNSSVRLLDLAYN 374
Score = 175 (66.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 88/341 (25%), Positives = 149/341 (43%)
Query: 220 SFNKLQIIELNSNVFDVFEKLQLLEISF--SL-FNSNEFPYYILNKNLNT---LEWLAMD 273
+ KL I+ L+ N F LL + F SL N I N +T LE++ +
Sbjct: 167 NLTKLSILVLSYNHFSGTIPSSLLTLPFLSSLDLRENYLTGSIEAPNSSTSSRLEFMYLG 226
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKIS-KIHNNLFHFNIHKRLKEIRLSNNYL--ELI 330
NN+ + + L +L +++L + K S I NLF + K L + LS N L I
Sbjct: 227 NNHFEGQILEPISKLINLKHLDLSFLKTSYPIDLNLF--SSFKSLVRLVLSGNSLLATSI 284
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
SD+ L N + LS L++ T KNL + +I LS N+IK P F NLP L
Sbjct: 285 TSDSKIPLNLENLVLLSCGLIEF--PTILKNLTKLEHIDLSNNKIKGKVPEWFWNLPRLR 342
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
+++L +N D L + + L+L+ N+ + + P+ I L NN
Sbjct: 343 RVNLFNNLFTD--LEGSEEVLVNSSVRLLDLAYNHFRGPFP----KPPLSINLLSAWNNS 396
Query: 451 IQ-EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNL-DVLELLSLEHNNIAVVVKRTF 508
+P+ SL L L +N + + + L +++L NN+ + F
Sbjct: 397 FTGNIPLETCNR--SSLAILDLSYNNLTGPIPRCLSDFQESLIVVNLRKNNLEGSLPDIF 454
Query: 509 IGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ +D+ +N+++ LR +++ HN+++
Sbjct: 455 SDGALLRTLDVGYNQLTGKLPRSLLNCSMLRFVSVDHNKIK 495
Score = 171 (65.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 93/371 (25%), Positives = 166/371 (44%)
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
F +L L+ L LS N + ++ S+ F +L +L++S + + FP+ +NL L
Sbjct: 118 FGNLNRLEVLYLSSNGF-LGQVPSS-FSNLSQLNILDLSHNELTGS-FPFV---QNLTKL 171
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
L + N+ SL L L+ ++L N ++ + + RL+ + L NN+
Sbjct: 172 SILVLSYNHFSGTIPSSLLTLPFLSSLDLRENYLTG-SIEAPNSSTSSRLEFMYLGNNHF 230
Query: 328 E--LIES-DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
E ++E NLK L+ L + I F + +++ +VLS N + +
Sbjct: 231 EGQILEPISKLINLKHLDLSFLKTSY--PIDLNLFSSFKSLVRLVLSGNSLLATSITSDS 288
Query: 385 NLP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
+P NL L L L +F + N+T + +++LSNN I P ++
Sbjct: 289 KIPLNLENLVLLSCGLIEFP-TILKNLTKLE---HIDLSNNKIKGKVPEWFWNLP-RLRR 343
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV-LELLSLEHNNIAV 502
++L NN ++ + S+R L L +N + F + + LLS +N+
Sbjct: 344 VNLFNNLFTDLEGSEEVLVNSSVRLLDLAYNHFRG----PFPKPPLSINLLSAWNNSFTG 399
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFY-FSFKLRILNISHNRLR-SLPRDVFSN-T 559
+ +L I+DLS+N ++ F L ++N+ N L SLP D+FS+
Sbjct: 400 NIPLETCNRSSLAILDLSYNNLTGPIPRCLSDFQESLIVVNLRKNNLEGSLP-DIFSDGA 458
Query: 560 IIEKLDISYNQ 570
++ LD+ YNQ
Sbjct: 459 LLRTLDVGYNQ 469
Score = 161 (61.7 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 91/378 (24%), Positives = 170/378 (44%)
Query: 218 SLSFNKLQIIELNSNVFD--VFEKL-QLLEIS-FSL-FNSNEFPYYI-LNKNLNTLEWLA 271
S + ++L+ + L +N F+ + E + +L+ + L F +P + L + +L L
Sbjct: 214 SSTSSRLEFMYLGNNHFEGQILEPISKLINLKHLDLSFLKTSYPIDLNLFSSFKSLVRLV 273
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N++ + + + LN NL I N+ K L+ I LSNN ++
Sbjct: 274 LSGNSLL-ATSITSDSKIPLNLENLVLLSCGLIEFPTILKNLTK-LEHIDLSNNKIKGKV 331
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQIKYIYPNAFVNLPNLV 390
+ F+NL L + L NL ++ + +N+ + ++ L++N + +P +++ NL
Sbjct: 332 PEWFWNLPRLRRVNLFNNLFTDLEGSEEVLVNSSVRLLDLAYNHFRGPFPKPPLSI-NL- 389
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
L +N F N+ ++ + L+LS N +T + +SL + N R
Sbjct: 390 -LSAWNNS---FTGNIPLETCNRSSLAILDLSYNNLTGPIPRCLSD---FQESLIVVNLR 442
Query: 451 IQEVPVNFLQTFADS--LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
+ + F+D LR L + +N++ + N +L +S++HN I
Sbjct: 443 KNNLEGSLPDIFSDGALLRTLDVGYNQLTGKLPRSLLNCSMLRFVSVDHNKIKDTFPFWL 502
Query: 509 IGMPNLQIIDLSFNEIS--MLTGEQFYFSF-KLRILNISHNRLR-SLPRDVFSNTIIEKL 564
+P+LQ + L N+ + ++ +F KLRIL IS N SLP + F N E
Sbjct: 503 KALPDLQALTLRSNKFHGPISPPDRGPLAFPKLRILEISDNNFTGSLPPNYFVNW--EAS 560
Query: 565 DISYNQD-KIRPGRESNP 581
+ N+D +I G +NP
Sbjct: 561 SLQMNEDGRIYMGDYNNP 578
Score = 122 (48.0 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 56/202 (27%), Positives = 90/202 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI F +L L+ ++L N +E + V V ++LL+++++ F FP
Sbjct: 325 NKIKGKVPEWFWNLPRLRRVNLFNNLFTDLEGSEEVL-VNSSVRLLDLAYNHFRG-PFPK 382
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKIS-KIHNNLFHFNIHKR 316
L+ NL + W NN+ N +SL ++L YN ++ I L F +
Sbjct: 383 PPLSINLLSA-W----NNSFTGNIPLETCNRSSLAILDLSYNNLTGPIPRCLSDFQ--ES 435
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L + L N LE D F + L T+ + YN L S N + + + + N+IK
Sbjct: 436 LIVVNLRKNNLEGSLPDIFSDGALLRTLDVGYNQLTGKLPRSLLNCSMLRFVSVDHNKIK 495
Query: 377 YIYPNAFVNLPNLVKLDLQDNK 398
+P LP+L L L+ NK
Sbjct: 496 DTFPFWLKALPDLQALTLRSNK 517
Score = 101 (40.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 53/205 (25%), Positives = 84/205 (40%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQ--IIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
NKI D + L +LQ L+L NK I + F KL++LEIS + F +
Sbjct: 492 NKIKDTFPFWLKALPDLQALTLRSNKFHGPISPPDRGPL-AFPKLRILEISDNNFTGSLP 550
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRN-YSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
P Y +N ++L+ + + N Y +Y T ++L+Y + +
Sbjct: 551 PNYFVNWEASSLQMNEDGRIYMGDYNNPYYIYEDT----VDLQYKGLFMEQGKVL----- 601
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
I S N LE ++ LK L + LS N S N+ + ++ LS NQ
Sbjct: 602 TSYATIDFSGNKLEGQIPESIGLLKALIALNLSNNAFTGHIPLSLANVTELESLDLSRNQ 661
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKL 399
+ PN L L + + N+L
Sbjct: 662 LSGTIPNGLKTLSFLAYISVAHNQL 686
Score = 100 (40.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 66/294 (22%), Positives = 127/294 (43%)
Query: 206 NLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLN 265
NLF +L L LS N L + S+ L+ +S L EFP + KNL
Sbjct: 261 NLFSSFKSLVRLVLSGNSLLATSITSDSKIPLNLENLVLLSCGLI---EFPTIL--KNLT 315
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
LE + + NN IK +NL L +NL N + + + ++ ++ + L+ N
Sbjct: 316 KLEHIDLSNNKIKGKVPEWFWNLPRLRRVNLFNNLFTDLEGSE-EVLVNSSVRLLDLAYN 374
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN 385
+ ++ L+ S+ ++T N +++ + LS+N + P +
Sbjct: 375 HFRGPFPKPPLSINLLSAWNNSFTGNIPLETC---NRSSLAILDLSYNNLTGPIPRCLSD 431
Query: 386 LP-NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
+L+ ++L+ N L+ ++FS+ +T L++ N +T + ++ +
Sbjct: 432 FQESLIVVNLRKNNLEGSLPDIFSDGALLRT---LDVGYNQLTGKLPRSLLNCSM-LRFV 487
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNE----IKHLDA--TAFGNLDVLEL 492
+ +N+I++ +L+ D L+ L L N+ I D AF L +LE+
Sbjct: 488 SVDHNKIKDTFPFWLKALPD-LQALTLRSNKFHGPISPPDRGPLAFPKLRILEI 540
Score = 76 (31.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 22 VTKLQHLGTTILKGDQL--QGIFNSK-LRELEITGKDLKFID-PSAFDNIDACYDLTLKI 77
VTKLQ L + L G +F + LR L ++ + PS F N++ L L
Sbjct: 73 VTKLQ-LPSGCLHGSMKPNSSLFGLQHLRYLNLSNNNFTSASLPSGFGNLNRLEVLYLS- 130
Query: 78 TNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATLYSNVTKLQHL 126
+N + ++PS N+ Q+ LDLSHN+L+ N+TKL L
Sbjct: 131 SNGFLGQVPSSF----SNLSQLNILDLSHNELT--GSFPFVQNLTKLSIL 174
Score = 70 (29.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQ--HLGTTILKGDQLQGIFNS-KLRELEITGKDLKF 58
+LDL N L+ A S ++L+ +LG +G L+ I L+ L+++ +
Sbjct: 197 SLDLRENYLTGSIEAPNSSTSSRLEFMYLGNNHFEGQILEPISKLINLKHLDLSFLKTSY 256
Query: 59 -IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIE-NIEQMTLDLSHNKLSVLNMATL 116
ID + F + + L L + + S KI N+E + L LS ++ T+
Sbjct: 257 PIDLNLFSSFKSLVRLVLSGNSLLATSITSD--SKIPLNLENLVL-LS---CGLIEFPTI 310
Query: 117 YSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKS 165
N+TKL+H+ + K + K R ++ N NLF L+ S
Sbjct: 311 LKNLTKLEHIDLSNNKIKGKVPEWFWNLP-RLRRVNLFN-NLFTDLEGS 357
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 154 (59.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 274 NNNIKNIRNYSLYNLTS-----LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + + + I LE N I I F +K+LK I +S N +
Sbjct: 84 SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF--TQYKKLKRIDISKNQIS 141
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I D F LK L ++ L N + + F L ++ ++L+ N+I + N F +L N
Sbjct: 142 DIAPDAFQGLKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 201
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L L L DNKL+ + +F+ + + QT L+L+ N
Sbjct: 202 LNLLSLYDNKLQTISKGLFAPLQAIQT---LHLAQN 234
Score = 144 (55.7 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 49/185 (26%), Positives = 84/185 (45%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L +++N I + ++ L +L INL NKI ++ F + ++E+ L+ N LE
Sbjct: 334 LRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAF--DGAASVQELMLTGNQLE 391
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F L L T+ L NL+ + +F L+++ + L N+I I P AF L +
Sbjct: 392 TVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 451
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L ++L N FN N K L I + N + Q P ++K + + +
Sbjct: 452 LSTINLLSNP---FNCNCHLAWLGKW------LRKRRIVS--GNPRCQKPFFLKEIPIQD 500
Query: 449 NRIQE 453
IQ+
Sbjct: 501 VAIQD 505
Score = 122 (48.0 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 38/130 (29%), Positives = 67/130 (51%)
Query: 418 NLNLSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+L L++N I+ L K+ P ++ ++LSNN+I+EV A S+++L L N++
Sbjct: 333 DLRLNDNEISVLEATGIFKKLP-NLRKINLSNNKIKEVREGAFDGAA-SVQELMLTGNQL 390
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
+ + F L L+ L L N I V TF G+ +++++ L N I+ +T F
Sbjct: 391 ETVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLV 450
Query: 537 KLRILNISHN 546
L +N+ N
Sbjct: 451 SLSTINLLSN 460
Score = 120 (47.3 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y+ L L++N I + + +LRK+ L N+IK + AF G V EL+ L
Sbjct: 328 PEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELM-LT 386
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + V R F G+ +L+ + L N I+ ++ + F +R+L++ NR+ ++ F
Sbjct: 387 GNQLETVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 446
Query: 557 SNTI 560
+ +
Sbjct: 447 TTLV 450
Score = 116 (45.9 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
LE N ++ + L + + L I LSNN + ++ + TF N+ L+T+ LSYN L+ I
Sbjct: 556 LEGNHLTAVPREL---SALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIP 612
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
+F L ++ + L N I + +F +L +L L L N L
Sbjct: 613 IHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNPL 656
Score = 110 (43.8 bits), Expect = 8.8e-12, Sum P(3) = 8.8e-12
Identities = 29/112 (25%), Positives = 53/112 (47%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K L L + + NN IK +R + S+ + L N++ +H +F + LK +
Sbjct: 351 KKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFR-GLSS-LKTLM 408
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L +N + + +DTF L + ++L N + +I +F L ++ I L N
Sbjct: 409 LRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 460
Score = 110 (43.8 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I K + E+ L N+L + + L+ L I LS N + + +F N++++ ++LS+
Sbjct: 547 IPKDVTELYLEGNHLTAVPRE-LSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSY 605
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
N+++ I +AF L +L L L N + FS++TS
Sbjct: 606 NRLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTS 645
Score = 103 (41.3 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 468 KLYLDFNEIKHLDATA--FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
+LYL+ N HL A L L L+ L +N+I V+ TF M +L + LS+N +
Sbjct: 553 ELYLEGN---HLTAVPRELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLR 609
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
+ F LR+L + N + S+P FS+ T + L + N
Sbjct: 610 CIPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTN 654
Score = 95 (38.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 31/128 (24%), Positives = 59/128 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
+ ++ N+IK+I + L I++ N+IS I + F + K L + L N +
Sbjct: 109 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQ-GL-KSLTSLVLYGNKITE 166
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F L L + L+ N + ++ +F++L N+ + L N+++ I F L +
Sbjct: 167 LAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAI 226
Query: 390 VKLDLQDN 397
L L N
Sbjct: 227 QTLHLAQN 234
Score = 91 (37.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L L N++T + + A ++ +DLSNN I V N+ + L L L +N ++
Sbjct: 554 LYLEGNHLTAVPR--ELSALRHLTLIDLSNNSIG-VLTNYTFSNMSHLSTLILSYNRLRC 610
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
+ AF L L +L+L N+I+ V + +F + +L + L N +
Sbjct: 611 IPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNPL 656
Score = 90 (36.7 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 31/113 (27%), Positives = 61/113 (53%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+I+ L +F+ L NL++++LS NK++ E+ FD +Q L ++ N E
Sbjct: 339 NEISVLEATGIFKKLPNLRKINLSNNKIK--EVREGAFDGAASVQELMLTG---NQLETV 393
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + + L++L+ L + +N I + N + L+S+ ++L N+I+ I F
Sbjct: 394 HGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 446
Score = 84 (34.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KL+ ++I+ + I P AF + + L L +I EL GLFD + ++ Q+ L L+
Sbjct: 129 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLY--GNKITELAKGLFDGLVSL-QLLL-LN 184
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
NK++ L + T LQ+L L D +
Sbjct: 185 ANKINCLRVNTFQD----LQNLNLLSLYDNK 211
Score = 78 (32.5 bits), Expect = 7.9e-15, Sum P(3) = 7.9e-15
Identities = 29/102 (28%), Positives = 44/102 (43%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N+I+D+ + F+ L KS+ N + NKI L N F
Sbjct: 138 NQISDIAPDAFQGL-KSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNANKINCLRVNTF 196
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
+ L NL LSL NKLQ I + +F + +Q L ++ + F
Sbjct: 197 QDLQNLNLLSLYDNKLQTI--SKGLFAPLQAIQTLHLAQNPF 236
Score = 76 (31.8 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 26/97 (26%), Positives = 41/97 (42%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N I + F +K + + + N D D + NKIT+L LF
Sbjct: 114 NSIKSIPAGAFTQYKK-LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELAKGLF 172
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
L +LQ L L+ NK+ + +N+ F + L LL +
Sbjct: 173 DGLVSLQLLLLNANKINCLRVNT--FQDLQNLNLLSL 207
Score = 71 (30.1 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN--EF 255
N I + F L+ + +S N QI ++ D F+ L+ L S L+ + E
Sbjct: 114 NSIKSIPAGAFTQYKKLKRIDISKN--QISDIAP---DAFQGLKSLT-SLVLYGNKITEL 167
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + L +L+ L ++ N I +R + +L +LN ++L NK+ I LF
Sbjct: 168 AKGLFD-GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 220
Score = 68 (29.0 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 26/102 (25%), Positives = 48/102 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI ++ F ++QEL L+ N+L+ + + +F L+ L + +L
Sbjct: 364 NKIKEVREGAFDGAASVQELMLTGNQLETV--HGRMFRGLSSLKTLMLRSNLITCVSNDT 421
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
+ L+++ L++ +N I I + L SL+ INL N
Sbjct: 422 FA---GLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 460
Score = 68 (29.0 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 29/115 (25%), Positives = 56/115 (48%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS--KLRELEITGKDLKFID 60
+D S+ KL+ + + L VT L+ L + + GIF LR++ ++ +K +
Sbjct: 313 VDCSNQKLARIP-SHLPEYVTDLR-LNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVR 370
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMAT 115
AFD + +L L T Q+E + +F + +++ TL L N ++ ++ T
Sbjct: 371 EGAFDGAASVQELML--TGNQLETVHGRMFRGLSSLK--TLMLRSNLITCVSNDT 421
Score = 56 (24.8 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS--NVTKLQHLG---TT 129
+++ I+ +P+G F + + +++ +D+S N++S + ++T L G T
Sbjct: 109 IRLEQNSIKSIPAGAFTQYKKLKR--IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 166
Query: 130 ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
+ K NKI L N F+ LQ
Sbjct: 167 LAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 200
Score = 54 (24.1 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 25/119 (21%), Positives = 49/119 (41%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNI 67
N +S + T +N+ + G T + + +GI +L + +K I AF
Sbjct: 73 NSISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQ-----NSIKSIPAGAFTQY 127
Query: 68 DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ I+ QI ++ F ++++ + L NK++ L L+ + LQ L
Sbjct: 128 KKLK--RIDISKNQISDIAPDAFQGLKSLTSLVL--YGNKITELAKG-LFDGLVSLQLL 181
Score = 53 (23.7 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 29/121 (23%), Positives = 53/121 (43%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
++ + L N + + P L +L +DL +N + FSN++ T + L+ +
Sbjct: 550 DVTELYLEGNHLTAV-PRELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLST-LILSYNR 607
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD--SLRKLYLDFNEIKHLDA 481
++ D ++ ++ L L N I VP +F+D SL L L N + H D
Sbjct: 608 LRCIPIHAFDGLRS---LRVLTLHGNDISSVPEG---SFSDLTSLSHLALGTNPL-HCDC 660
Query: 482 T 482
+
Sbjct: 661 S 661
Score = 49 (22.3 bits), Expect = 7.0e-12, Sum P(3) = 7.0e-12
Identities = 23/110 (20%), Positives = 55/110 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+D+S N++S + L+ L + +L G+++ +G+F+ L+ L + +
Sbjct: 133 IDISKNQISDIAPDAFQG----LKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNANKI 188
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
+ + F ++ +L L + + +++ + GLF ++ I+ TL L+ N
Sbjct: 189 NCLRVNTFQDLQNL-NL-LSLYDNKLQTISKGLFAPLQAIQ--TLHLAQN 234
Score = 49 (22.3 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
R N IT ++ + F L +++ LSL N++ I F L + + + FN N
Sbjct: 410 RSNLITCVSNDTFAGLSSVRLLSLYDNRITTI--TPGAFTTLVSLSTINLLSNPFNCN 465
>UNIPROTKB|P40197 [details] [associations]
symbol:GP5 "Platelet glycoprotein V" species:9606 "Homo
sapiens" [GO:0005518 "collagen binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0010544 "negative
regulation of platelet activation" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0007597 "blood
coagulation, intrinsic pathway" evidence=TAS] [GO:0030168 "platelet
activation" evidence=TAS] Reactome:REACT_604 Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030168 GO:GO:0005887
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007597 GO:GO:0007155 GO:GO:0007160
InterPro:IPR000372 SMART:SM00013 GO:GO:0010544 EMBL:L11238
EMBL:Z23091 IPI:IPI00027410 PIR:A48030 RefSeq:NP_004479.1
UniGene:Hs.73734 ProteinModelPortal:P40197 SMR:P40197 STRING:P40197
PhosphoSite:P40197 DMDM:729616 PaxDb:P40197 PeptideAtlas:P40197
PRIDE:P40197 DNASU:2814 Ensembl:ENST00000323007
Ensembl:ENST00000401815 GeneID:2814 KEGG:hsa:2814 UCSC:uc003ftv.1
CTD:2814 GeneCards:GC03M194115 HGNC:HGNC:4443 MIM:173511
neXtProt:NX_P40197 PharmGKB:PA28823 HOGENOM:HOG000112798
HOVERGEN:HBG005906 InParanoid:P40197 KO:K06260 OMA:AMIKIGQ
OrthoDB:EOG4JHCFD PhylomeDB:P40197 GenomeRNAi:2814 NextBio:11093
PMAP-CutDB:P40197 ArrayExpress:P40197 Bgee:P40197 CleanEx:HS_GP5
Genevestigator:P40197 GermOnline:ENSG00000178732 Uniprot:P40197
Length = 560
Score = 225 (84.3 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 87/350 (24%), Positives = 160/350 (45%)
Query: 229 LNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNL 288
L S F LQ L IS S ++ + +L L+ L + N I ++ L +
Sbjct: 65 LQSQSFSGMTVLQRLMISDSHISAVAPGTF---SDLIKLKTLRLSRNKITHLPGALLDKM 121
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
L + L++N + I N+F ++ L+E+ L+ N L+ + + F NL+ L + LS
Sbjct: 122 VLLEQLFLDHNALRGIDQNMFQKLVN--LQELALNQNQLDFLPASLFTNLENLKLLDLSG 179
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L + + ++L N++ + +L L +L N ++ F
Sbjct: 180 NNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFD 239
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRK 468
+ + + L LS N++ L + + L L N + E+P L L++
Sbjct: 240 RLPNLSS---LTLSRNHLAFLPSALFLHSH-NLTLLTLFENPLAELP-GVLFGEMGGLQE 294
Query: 469 LYLDFNEIKHLDATAFGNLDVLELLSLEHN-NIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L+L+ +++ L A AF NL L L + + ++ + + F G+ LQ++ L N ++ L
Sbjct: 295 LWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTAL 354
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYNQDKIRPG 576
KLR +++ NRLR+LPR +F N + +E + + +NQ + PG
Sbjct: 355 PDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPG 404
Score = 216 (81.1 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 96/411 (23%), Positives = 180/411 (43%)
Query: 9 KLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNID 68
++S L + T +++ L +G +L+ G+ + L+ L I+ + + P F ++
Sbjct: 42 RISALGLPTNLTHIL-LFGMGRGVLQSQSFSGM--TVLQRLMISDSHISAVAPGTFSDLI 98
Query: 69 ACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGT 128
TL+++ +I LP L DK+ +EQ+ LD HN L ++ ++ + LQ L
Sbjct: 99 KLK--TLRLSRNKITHLPGALLDKMVLLEQLFLD--HNALRGIDQ-NMFQKLVNLQELA- 152
Query: 129 TILKDREKXXXXXXXXXXRCN-KITDLNGNLFRHLQKSIVKAKK-------NNNNNEDQV 180
L + N K+ DL+GN HL K ++ A+ ++N
Sbjct: 153 --LNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLD 210
Query: 181 SDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKL 240
S N I + F L NL L+LS N L L S +F L
Sbjct: 211 SGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAF--LPSALFLHSHNL 268
Query: 241 QLLEISFSLFNSN--EFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEY 298
LL +LF + E P + + + L+ L ++ ++ + + NL+ L Y+ +
Sbjct: 269 TLL----TLFENPLAELPGVLFGE-MGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTL 323
Query: 299 N-KISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTT 357
+ ++S + F + + L+ + L +N L + L +L ++L N L+++
Sbjct: 324 SPRLSALPQGAFQ-GLGE-LQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRA 381
Query: 358 SFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVF 407
F+NL+++ ++ L NQ++ + + F LP L ++ L N + D L F
Sbjct: 382 LFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHNSWRCDCGLGPF 432
Score = 212 (79.7 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 79/303 (26%), Positives = 139/303 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + ++ N+F+ L NLQEL+L+ N+L L +++F E L+LL++S + N P
Sbjct: 132 NALRGIDQNMFQKLVNLQELALNQNQLDF--LPASLFTNLENLKLLDLSGN--NLTHLPK 187
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+L LE L + +N + ++ + L +L +L + N I I F + L
Sbjct: 188 GLLGAQAK-LERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAF--DRLPNL 244
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ LS N+L + S F + L +TL N L + F + + + L+ Q++
Sbjct: 245 SSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRT 304
Query: 378 IYPNAFVNLPNLVKLDLQ-DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ AF NL L L + +L F + Q L L +N +T L + +
Sbjct: 305 LPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQV---LALHSNGLTALPDGLLRG 361
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
++ + L NR++ +P + + SL + LD N+++ L FG L L + L
Sbjct: 362 LG-KLRQVSLRRNRLRALPRALFRNLS-SLESVQLDHNQLETLPGDVFGALPRLTEVLLG 419
Query: 497 HNN 499
HN+
Sbjct: 420 HNS 422
Score = 209 (78.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 85/326 (26%), Positives = 148/326 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFP 256
NKIT L G L + L++L L N L+ I+ N +F+KL L E++ + N +F
Sbjct: 108 NKITHLPGALLDKMVLLEQLFLDHNALRGIDQN-----MFQKLVNLQELALNQ-NQLDFL 161
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L NL L+ L + NN+ ++ L L + L N++ + + L N
Sbjct: 162 PASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLL--NSLGA 219
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L E++ N++ I F L L+++TLS N L + + F + +N+ + L N +
Sbjct: 220 LTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLA 279
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+ F + L +L L +L+ F N+ S+ + + LS ++ L + Q
Sbjct: 280 ELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNL-SRLRYLGVTLSPR-LSALPQG-AFQ 336
Query: 437 APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
++ L L +N + +P L+ LR++ L N ++ L F NL LE + L+
Sbjct: 337 GLGELQVLALHSNGLTALPDGLLRGLG-KLRQVSLRRNRLRALPRALFRNLSSLESVQLD 395
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFN 522
HN + + F +P L + L N
Sbjct: 396 HNQLETLPGDVFGALPRLTEVLLGHN 421
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 89/362 (24%), Positives = 154/362 (42%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNK 262
L F + LQ L +S + + + F KL+ L +S + P +L+K
Sbjct: 65 LQSQSFSGMTVLQRLMISDSHISAVA--PGTFSDLIKLKTLRLSRNKIT--HLPGALLDK 120
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+ LE L +D+N ++ I L +L + L N++ + +LF N+ + LK + L
Sbjct: 121 MV-LLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFT-NL-ENLKLLDL 177
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S N L + +L + L N L S+ + +L + + N I+ I P A
Sbjct: 178 SGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGA 237
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP--IY 440
F LPNL L L N L +F L+ N + L+EN + P ++
Sbjct: 238 FDRLPNLSSLTLSRNHLAFLPSALF-----------LHSHNLTLLTLFENPLAELPGVLF 286
Query: 441 -----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN-EIKHLDATAFGNLDVLELLS 494
++ L L+ +++ +P + + LR L + + + L AF L L++L+
Sbjct: 287 GEMGGLQELWLNRTQLRTLPAAAFRNLS-RLRYLGVTLSPRLSALPQGAFQGLGELQVLA 345
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
L N + + G+ L+ + L N + L F L + + HN+L +LP D
Sbjct: 346 LHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGD 405
Query: 555 VF 556
VF
Sbjct: 406 VF 407
Score = 196 (74.1 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 61/230 (26%), Positives = 109/230 (47%)
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN-LP 387
+++S +F + L + +S + + ++ +F +L + + LS N+I ++ P A ++ +
Sbjct: 64 VLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHL-PGALLDKMV 122
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
L +L L N L+ + N+F + + Q +N N + +L+ N + +K LDL
Sbjct: 123 LLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLEN-----LKLLDL 177
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
S N + +P L A L +L L N + LD+ +L L L N+I +
Sbjct: 178 SGNNLTHLPKGLLGAQA-KLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPG 236
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
F +PNL + LS N ++ L F S L +L + N L LP +F
Sbjct: 237 AFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLF 286
>MGI|MGI:3045299 [details] [associations]
symbol:Lrrd1 "leucine rich repeats and death domain
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS50017 PROSITE:PS51450
MGI:MGI:3045299 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 HSSP:P25147 UniGene:Mm.482273
GeneTree:ENSGT00700000104287 CTD:401387 HOVERGEN:HBG108705
OrthoDB:EOG4K6G5V EMBL:AK029981 EMBL:BC141026 EMBL:BC145170
IPI:IPI00223958 RefSeq:NP_766467.2 ProteinModelPortal:Q8C0R9
SMR:Q8C0R9 PhosphoSite:Q8C0R9 PRIDE:Q8C0R9
Ensembl:ENSMUST00000044039 GeneID:242838 KEGG:mmu:242838
HOGENOM:HOG000060227 InParanoid:B2RU96 OMA:HTIACYL NextBio:385582
Bgee:Q8C0R9 CleanEx:MM_4932412H11RIK Genevestigator:Q8C0R9
Uniprot:Q8C0R9
Length = 853
Score = 228 (85.3 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 115/391 (29%), Positives = 184/391 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I L L HL L+ LSL N L I + + L++L + ++
Sbjct: 238 NHIDTLPSGL-EHLRYLETLSLGKNMLTYIP---DSLSSLKNLRILNLEYNQLTIFSKSL 293
Query: 258 YILNKNLNTLEWLA-MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L K LN+L M + K +R L NL SL +++NK++ + +F +
Sbjct: 294 CFLPK-LNSLNLTGNMIGSLPKEVRE--LKNLESLL---MDHNKLTFLAVEIFQL---PK 344
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
+KE+ L++N LE I S N KEL + L NLL+SI + N+ ++ LS N I+
Sbjct: 345 IKELHLADNKLEAI-SPKIENFKELRLLNLDKNLLQSIPK-KISHCVNLESLSLSDNNIE 402
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNV--FSNI-----TSKQ-TPMNLNLSN-NYIT 427
+ P L NL +L + NK+ + SNI + Q T + + + N IT
Sbjct: 403 EL-PKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKIT 461
Query: 428 N--LYENDKKQAPI---YIKSLD-LS--NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
L N+ P+ ++SLD LS N I E+PV+ +F+ L L L+ N++ +
Sbjct: 462 RVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDM--SFSKQLLHLELNRNKLT-V 518
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK-L 538
+ +L LE L L N I + + M +L ++ LS N+ E S K L
Sbjct: 519 FSKHLCSLTNLEYLDLAKNQI-MTIPSCISAMVSLHVLILSDNKFESFPKE--LCSLKNL 575
Query: 539 RILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
R+L+IS N+L+ +P ++ I+KL++S N
Sbjct: 576 RVLDISENKLQKIPLEISKLKRIQKLNLSNN 606
Score = 207 (77.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 130/575 (22%), Positives = 247/575 (42%)
Query: 1 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
+ + L HN L +LN + Y+ ++++ +L QL+ +R+L + + +
Sbjct: 199 LEIQLFHN-LKILNAS--YNEISQIPK---ELL---QLEN-----MRQLLLNSNHIDTL- 243
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY-SN 119
PS +++ Y TL + + +P L ++N+ L+L +N+L++ + + +
Sbjct: 244 PSGLEHLR--YLETLSLGKNMLTYIPDSL-SSLKNLR--ILNLEYNQLTIFSKSLCFLPK 298
Query: 120 VTKLQHLGTTI--LKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNE 177
+ L G I L + NK+T L +F+ L K +K +N
Sbjct: 299 LNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQ-LPK--IKELHLADNKL 355
Query: 178 DQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK-------------L 224
+ +S + + N + + + H NL+ LSLS N L
Sbjct: 356 EAISPKIENFKELRLLNLDKNLLQSIPKKI-SHCVNLESLSLSDNNIEELPKKIRKLKNL 414
Query: 225 QIIELNSN-VFDVFEKLQ-LLEISFSLFNSNEFPYYILN-KNLNTLEWLAMDNNNIKNIR 281
+ + +N N + + E++ L I F+ N+ + + KN + + ++ NNI
Sbjct: 415 RQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFP 474
Query: 282 NYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKEL 341
L L SL+Y++ N IS+I ++ + K+L + L+ N L + S +L L
Sbjct: 475 -VGLCALQSLDYLSFNGNYISEIPVDM---SFSKQLLHLELNRNKLTVF-SKHLCSLTNL 529
Query: 342 NTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD 401
+ L+ N + +I + + ++ ++LS N+ + +P +L NL LD+ +NKL+
Sbjct: 530 EYLDLAKNQIMTIPSC-ISAMVSLHVLILSDNKFES-FPKELCSLKNLRVLDISENKLQK 587
Query: 402 FNLNVFSNITSKQTPMNLNLSNNYITNL-YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQ 460
L + S + Q LNLSNN TN E + Q + S ++ +P
Sbjct: 588 IPLEI-SKLKRIQ---KLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTRLPEEV-- 641
Query: 461 TFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLS 520
+ L+ L + N IK + G L L +N I+ + +F+ + LQ +DL
Sbjct: 642 SHMTQLKILNISNNAIKDIPKN-IGELRSLVSFYASNNQISSLPS-SFLSLEVLQSLDLR 699
Query: 521 FNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
N ++ L + S L+ +N N L P ++
Sbjct: 700 GNNMTALPSGIYKLS-SLKEINFDDNPLMRPPMEI 733
Score = 206 (77.6 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 102/394 (25%), Positives = 187/394 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I + G L L+ LSL N L I L +F L++L S++ ++ P
Sbjct: 168 NQIKNFQGIDPGDLLGLEILSLQENGLSSIPLE---IQLFHNLKILNASYN--EISQIPK 222
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+L L + L +++N+I + + L +L L ++L N ++ I ++L K L
Sbjct: 223 ELLQ--LENMRQLLLNSNHIDTLPS-GLEHLRYLETLSLGKNMLTYIPDSLSSL---KNL 276
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L N L + + L +LN++ L+ N++ S+ + L N+ ++++ N++ +
Sbjct: 277 RILNLEYNQLTIFSKSLCF-LPKLNSLNLTGNMIGSLPK-EVRELKNLESLLMDHNKLTF 334
Query: 378 IYPNAFVNLPNLVKLDLQDNKLK-------DFN----LNVFSNITSKQTPMNLNLSNNYI 426
+ F LP + +L L DNKL+ +F LN+ N+ + P ++ N
Sbjct: 335 LAVEIF-QLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLL-QSIPKKISHCVNLE 392
Query: 427 T-NLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL----YLDF--NEIKHL 479
+ +L +N+ ++ P I+ L N R V N + T + + L L+F N+I H+
Sbjct: 393 SLSLSDNNIEELPKKIRKL--KNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHV 450
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID-LSFNE--ISMLTGEQFYFSF 536
N + + L +NNI +G+ LQ +D LSFN IS + + FS
Sbjct: 451 PIE-IKNCRKITRVELNYNNIMYFP----VGLCALQSLDYLSFNGNYISEIPVDMS-FSK 504
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+L L ++ N+L + + S T +E LD++ NQ
Sbjct: 505 QLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQ 538
Score = 202 (76.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 106/393 (26%), Positives = 167/393 (42%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVF----EKLQLLEISFSLFNSNEFPYY 258
LN + + + + + L ++ + LNSN D E L+ LE + SL N Y
Sbjct: 210 LNAS-YNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLE-TLSL-GKNMLTYI 266
Query: 259 ILN-KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI------------- 304
+ +L L L ++ N + I + SL L LN +NL N I +
Sbjct: 267 PDSLSSLKNLRILNLEYNQL-TIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESL 325
Query: 305 ---HNNLFHFNIH----KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTT 357
HN L + ++KE+ L++N LE I S N KEL + L NLL+SI
Sbjct: 326 LMDHNKLTFLAVEIFQLPKIKELHLADNKLEAI-SPKIENFKELRLLNLDKNLLQSIPK- 383
Query: 358 SFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPM 417
+ N+ ++ LS N I+ + P L NL +L + NK+ + + I+
Sbjct: 384 KISHCVNLESLSLSDNNIEEL-PKKIRKLKNLRQLHVNRNKM----ITMTEEISHLSNIH 438
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
L S N IT++ K I ++L+ N I PV SL L + N I
Sbjct: 439 ILEFSGNQITHVPIEIKNCRKI--TRVELNYNNIMYFPVGLCAL--QSLDYLSFNGNYIS 494
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
+ + +L L L N + V K + NL+ +DL+ N+I M
Sbjct: 495 EIPVDMSFSKQLLHL-ELNRNKLTVFSKH-LCSLTNLEYLDLAKNQI-MTIPSCISAMVS 551
Query: 538 LRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
L +L +S N+ S P+++ S + LDIS N+
Sbjct: 552 LHVLILSDNKFESFPKELCSLKNLRVLDISENK 584
Score = 192 (72.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 84/336 (25%), Positives = 164/336 (48%)
Query: 254 EFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI--HNNLFHF 311
EFP I+ + +++L +D N IKN + +L L ++L+ N +S I LFH
Sbjct: 149 EFPVDIVK--VKYVKYLYLDKNQIKNFQGIDPGDLLGLEILSLQENGLSSIPLEIQLFH- 205
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
LK + S N + I + L+ + + L+ N + ++ + ++L + + L
Sbjct: 206 ----NLKILNASYNEISQIPKELL-QLENMRQLLLNSNHIDTLPS-GLEHLRYLETLSLG 259
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN-----------LNVFSNITSKQTPMNLN 420
N + YI P++ +L NL L+L+ N+L F+ LN+ N+ P +
Sbjct: 260 KNMLTYI-PDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGS-LPKEVR 317
Query: 421 LSNNYITNLYENDKKQ---APIY----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
N + L +++K I+ IK L L++N+++ + ++ F + LR L LD
Sbjct: 318 ELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPK-IENFKE-LRLLNLDK 375
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N ++ + ++ LE LSL NNI + K+ + NL+ + ++ N++ +T E +
Sbjct: 376 NLLQSIPKKISHCVN-LESLSLSDNNIEELPKK-IRKLKNLRQLHVNRNKMITMTEEISH 433
Query: 534 FSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
S + IL S N++ +P ++ + I +++++YN
Sbjct: 434 LS-NIHILEFSGNQITHVPIEIKNCRKITRVELNYN 468
Score = 173 (66.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 113/481 (23%), Positives = 197/481 (40%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDP 61
+L + HNKL+ L + K HL L+ + I N K EL + D +
Sbjct: 324 SLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPK-IENFK--ELRLLNLDKNLLQ- 379
Query: 62 SAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNV 120
S I C +L +L +++ IEELP + K++N+ Q L ++ NK M T+ +
Sbjct: 380 SIPKKISHCVNLESLSLSDNNIEELPKKI-RKLKNLRQ--LHVNRNK-----MITMTEEI 431
Query: 121 TKLQHLGTTILKDREKXXXXXXXXXXRCNKIT--DLNGNLFRHLQKSIVKAKKN-----N 173
+ L ++ IL+ C KIT +LN N + + + N
Sbjct: 432 SHLSNIH--ILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFN 489
Query: 174 NNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNV 233
N ++ NK+T + +L L NL+ L L+ N QI+ + S +
Sbjct: 490 GNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCS-LTNLEYLDLAKN--QIMTIPSCI 546
Query: 234 FDVFEKLQLLEISFSLFNSNEFPYYILN-KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLN 292
L +L +S + F S FP + + KNL L+ + N ++ I + L +
Sbjct: 547 -SAMVSLHVLILSDNKFES--FPKELCSLKNLRVLD---ISENKLQKIP-LEISKLKRIQ 599
Query: 293 YINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLK 352
+NL N + L + L + S L + + + + +L + +S N +K
Sbjct: 600 KLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTRLPEEVSH-MTQLKILNISNNAIK 658
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
I + L ++++ S NQI + P++F++L L LDL+ N + ++ +
Sbjct: 659 DIPK-NIGELRSLVSFYASNNQISSL-PSSFLSLEVLQSLDLRGNNMTALPSGIYKLSSL 716
Query: 413 KQT----------PMNL--NLSNNYIT-NLYENDKKQAPIYIKSLDLSNNRIQEVPVNFL 459
K+ PM + + IT L D++ I K ++ N I E FL
Sbjct: 717 KEINFDDNPLMRPPMEICKGKEMHMITCYLQRADERDEKILEKIFNIVANSITETNFEFL 776
Query: 460 Q 460
Q
Sbjct: 777 Q 777
Score = 152 (58.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 86/385 (22%), Positives = 170/385 (44%)
Query: 199 KITDLN--GNLFRHL-YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
K+ LN GN+ L ++EL + L +++ N F E QL +I N+
Sbjct: 298 KLNSLNLTGNMIGSLPKEVRELK-NLESL-LMDHNKLTFLAVEIFQLPKIKELHLADNKL 355
Query: 256 PYYILN-KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
+N L L +D N +++I + + +L ++L N I ++ +
Sbjct: 356 EAISPKIENFKELRLLNLDKNLLQSIPK-KISHCVNLESLSLSDNNIEELPKKIRKL--- 411
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K L+++ ++ N + + ++ +L ++ + S N + + KN + + L++N
Sbjct: 412 KNLRQLHVNRNKM-ITMTEEISHLSNIHILEFSGNQITHVPI-EIKNCRKITRVELNYNN 469
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
I Y +P L +L L N + + +++ SKQ ++L L+ N +T ++
Sbjct: 470 IMY-FPVGLCALQSLDYLSFNGNYISEIPVDMSF---SKQL-LHLELNRNKLTVFSKH-- 522
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL--DATAFGNLDVLEL 492
+ ++ LDL+ N+I +P + + SL L L N+ + + + NL VL++
Sbjct: 523 LCSLTNLEYLDLAKNQIMTIP-SCISAMV-SLHVLILSDNKFESFPKELCSLKNLRVLDI 580
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE--QFYFSFKLRILNISHNRLRS 550
+ I + + + + +Q ++LS N + E Q +L I S +L
Sbjct: 581 SENKLQKIPLEISK----LKRIQKLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTR 636
Query: 551 LPRDVFSNTIIEKLDISYNQDKIRP 575
LP +V T ++ L+IS N K P
Sbjct: 637 LPEEVSHMTQLKILNISNNAIKDIP 661
Score = 133 (51.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 43/192 (22%), Positives = 94/192 (48%)
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
P + N+ +++ L ++++ L+ + + + P+ + ++ ++K +
Sbjct: 76 PFSETNIADIIPLSIEES-LQSSGSSE-TKMAEDYYPVKFPTGRKFRGRIFNGNQKGLDM 133
Query: 440 YIKS--LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+ ++L +QE PV+ ++ ++ LYLD N+IK+ G+L LE+LSL+
Sbjct: 134 KSDNFTVNLDAKGLQEFPVDIVKV--KYVKYLYLDKNQIKNFQGIDPGDLLGLEILSLQE 191
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N ++ + + NL+I++ S+NEIS + E +R L ++ N + +LP +
Sbjct: 192 NGLSSIPLEIQL-FHNLKILNASYNEISQIPKELLQLE-NMRQLLLNSNHIDTLPSGLEH 249
Query: 558 NTIIEKLDISYN 569
+E L + N
Sbjct: 250 LRYLETLSLGKN 261
>UNIPROTKB|A1XC24 [details] [associations]
symbol:TLR7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045416 "positive regulation of interleukin-8 biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045356
"positive regulation of interferon-alpha biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0035197 "siRNA binding" evidence=IEA] [GO:0034154 "toll-like
receptor 7 signaling pathway" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IEA]
[GO:0032722 "positive regulation of chemokine production"
evidence=IEA] [GO:0032009 "early phagosome" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006955 "immune response" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR026880 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0006955
GO:GO:0005768 GO:GO:0003727 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032722 GO:GO:0032755
GO:GO:0005764 GO:GO:0051607 GO:GO:0032009 GO:GO:0003725
GO:GO:0032757 GO:GO:0071260 GO:GO:0035197 InterPro:IPR000372
SMART:SM00013 GO:GO:0045416 GO:GO:0042346 GO:GO:0045078
InterPro:IPR026906 Pfam:PF13306 GO:GO:0007252 SUPFAM:SSF52200
GO:GO:0034154 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0045356 eggNOG:NOG286662 HOVERGEN:HBG018601 OMA:AFYLSHQ
OrthoDB:EOG4BCDM5 PANTHER:PTHR24365:SF1 EMBL:DAAA02075466
EMBL:DAAA02075467 EMBL:DAAA02075468 EMBL:DAAA02075469 EMBL:DQ333225
EMBL:EF583900 IPI:IPI00713788 UniGene:Bt.111931 UniGene:Bt.91493
STRING:A1XC24 Ensembl:ENSBTAT00000029895 InParanoid:A1XC24
Uniprot:A1XC24
Length = 1050
Score = 228 (85.3 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 117/404 (28%), Positives = 193/404 (47%)
Query: 208 FRHL-YNLQELSLSFN-KLQIIELNSNVFDVF---EKLQLLEIS---FSLFNS-NEFPYY 258
F HL +NL L LSFN LQ+ N+ D F +KL++L I F NS N FP +
Sbjct: 335 FLHLLHNLVNLDLSFNYDLQVYHAVINLSDAFSSLKKLKVLRIKGYVFKELNSLNLFPLH 394
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFH-FNIHKR 316
NL LE L + N IK I N S++N +L +I+L NKIS ++ F ++R
Sbjct: 395 ----NLPNLEVLDLGTNFIK-IANLSIFNQFKTLKFIDLSVNKISPSGDSPEGGFCSNRR 449
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNN---MLN--IVLS 371
+ + +++E+ ++ E S KS + SF LN M + LS
Sbjct: 450 TS---VEGHGPQVLETLHYFRYDEYARSCRS----KSKEPPSFLPLNEDCYMYGQTLDLS 502
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKD-FNLNVFSNITSKQTPMNLNLSNNYITNLY 430
N I +I P+ F +L L L+L N + N + F + + L+ SNN + LY
Sbjct: 503 RNNIFFIKPSDFQHLSFLKCLNLSGNSISQTLNGSEFQPLVELKY---LDFSNNRLDLLY 559
Query: 431 ENDKKQAPIYIKSLDLSNNR--IQEVPVNFLQTFADSL---RKLYLDFNEIKHLDATAFG 485
++ ++ LD+S+N Q + + F +L RKL +++N+I +
Sbjct: 560 STAFEELH-NLEVLDISSNSHYFQSEGITHMLNFTKNLKVLRKLMMNYNDIATSTSRTME 618
Query: 486 NLDVLELLSLEHNNIAVVVK-------RTFIGMPNLQIIDLSFNEISMLTGEQF-YFSFK 537
+ + L++L N++ ++ + + F + NL+ +D+S N +S L F
Sbjct: 619 S-ESLQILEFRGNHLDILWRDGDNRYLKFFKNLLNLEELDISENSLSFLPLGVFDSMPPN 677
Query: 538 LRILNISHNRLRSLPRD-VFSNTIIEKLDISYNQDKIRPGRESN 580
L+ L+++ N L+S + + S +E LD+S+NQ K P R SN
Sbjct: 678 LKTLSLAKNGLKSFSWERLQSLKNLETLDLSFNQLKTVPERLSN 721
Score = 209 (78.6 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 117/523 (22%), Positives = 218/523 (41%)
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSV-LNMATLY 117
IDP+AFD + L++ + ++ +P F I +++ LDLS N L+ + A
Sbjct: 281 IDPNAFDALTELQ--VLRLHSNSLQHVPQRWFKNINKLKE--LDLSQNFLAKEIGDAKFL 336
Query: 118 SNVTKLQHLGTTILKDREKXXX----XXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNN 173
+ L +L + D + + K+ + G +F+ L + N
Sbjct: 337 HLLHNLVNLDLSFNYDLQVYHAVINLSDAFSSLKKLKVLRIKGYVFKELNSLNLFPLHNL 396
Query: 174 NNNE--DQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS 231
N E D ++ K + K DL+ N + E N+ +E +
Sbjct: 397 PNLEVLDLGTNFIKIANLSIFNQFKTLKFIDLSVNKISPSGDSPEGGFCSNRRTSVEGHG 456
Query: 232 -NVFDVFEKLQLLEISFSLFN-SNEFPYYI-LNKNLNTL-EWLAMDNNNIKNIRNYSLYN 287
V + + E + S + S E P ++ LN++ + L + NNI I+ +
Sbjct: 457 PQVLETLHYFRYDEYARSCRSKSKEPPSFLPLNEDCYMYGQTLDLSRNNIFFIKPSDFQH 516
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
L+ L +NL N IS+ N F LK + SNN L+L+ S F L L + +S
Sbjct: 517 LSFLKCLNLSGNSISQTLNGS-EFQPLVELKYLDFSNNRLDLLYSTAFEELHNLEVLDIS 575
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK--DFNLN 405
N S S + + +MLN + ++ + N + ++ ++ L+ +F N
Sbjct: 576 SN---SHYFQS-EGITHMLNFTKNLKVLRKLMMN-YNDIATSTSRTMESESLQILEFRGN 630
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADS 465
+I + N Y+ ++N + ++ LD+S N + +P+ + +
Sbjct: 631 HL-DILWRDG------DNRYL-KFFKN-----LLNLEELDISENSLSFLPLGVFDSMPPN 677
Query: 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
L+ L L N +K +L LE L L N + V +R +L+ + L N+I
Sbjct: 678 LKTLSLAKNGLKSFSWERLQSLKNLETLDLSFNQLKTVPERLSNCSRSLKKLILKNNQIR 737
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISY 568
LT +F+LR L++S N+++ + + F ++ L+I +
Sbjct: 738 CLTKYFLQGAFQLRHLDLSSNKIQVIQKTSFPENVLNNLNILF 780
Score = 185 (70.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 103/351 (29%), Positives = 150/351 (42%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
C K + N F L L+ L L N Q++E+ D+ LQLL SL +N F
Sbjct: 112 CTKRLQIKPNSFSKLTYLKSLYLDGN--QLLEIPQ---DLPPSLQLL----SLEANNIF- 161
Query: 257 YYILNKNLN---TLEWLAMDNN-------NIK-NIRNYSLYNLTSLNYINLEYNKISKIH 305
I+ +NL LE L + N N+ I + N+ +L ++L+ N IS +
Sbjct: 162 -LIMKENLTELANLEILYLGQNCYYRNPCNVSFTIEKDAFLNMRNLKLLSLKDNNISAVP 220
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM 365
L L E+ L NN + I+ D F NL +L + LS N + F
Sbjct: 221 TVL-----PSSLTELYLYNNIITKIQEDDFNNLSQLQVLDLSGNCPRCYNVP-FPCTPCE 274
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
N L + PNAF L L L L N L+ F NI + L+LS N+
Sbjct: 275 NNSPLQID------PNAFDALTELQVLRLHSNSLQHVPQRWFKNINKLK---ELDLSQNF 325
Query: 426 ITNLYENDKKQAPIY-IKSLDLSNN---RIQEVPVNFLQTFADSLRKL-------YLDFN 474
+ + K ++ + +LDLS N ++ +N F+ SL+KL Y+ F
Sbjct: 326 LAKEIGDAKFLHLLHNLVNLDLSFNYDLQVYHAVINLSDAFS-SLKKLKVLRIKGYV-FK 383
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
E+ L+ NL LE+L L N I + F L+ IDLS N+IS
Sbjct: 384 ELNSLNLFPLHNLPNLEVLDLGTNFIKIANLSIFNQFKTLKFIDLSVNKIS 434
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 92/378 (24%), Positives = 163/378 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQI-IELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N I ++ F L +L E+ N + + + NV ++LQ+ SFS +
Sbjct: 75 NHIAGISPASFHRLDHLVEIDFRCNCVPVRLGPKDNVCT--KRLQIKPNSFSKLTYLKSL 132
Query: 257 YYILNKNLN-------TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
Y N+ L +L+ L+++ NNI I +L L +L + L N + N+
Sbjct: 133 YLDGNQLLEIPQDLPPSLQLLSLEANNIFLIMKENLTELANLEILYLGQNCYYRNPCNV- 191
Query: 310 HFNIHK-------RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNL 362
F I K LK + L +N + + + +L EL L N++ I+ F NL
Sbjct: 192 SFTIEKDAFLNMRNLKLLSLKDNNISAVPTVLPSSLTELY---LYNNIITKIQEDDFNNL 248
Query: 363 NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+ + + LS N P + N+P ++N + N F +T Q L L
Sbjct: 249 SQLQVLDLSGN-----CPRCY-NVP-FPCTPCENNSPLQIDPNAFDALTELQV---LRLH 298
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRI-QEV-PVNFLQTFADSLRKLYLDFN---EIK 477
+N + ++ + K +K LDLS N + +E+ FL +L L L FN ++
Sbjct: 299 SNSLQHVPQRWFKNIN-KLKELDLSQNFLAKEIGDAKFLHLL-HNLVNLDLSFNYDLQVY 356
Query: 478 HLD---ATAFGNLDVLELLSLEHNNIAVVVKRTFI---GMPNLQIIDLSFNEISMLTGEQ 531
H + AF +L L++L ++ + +PNL+++DL N I +
Sbjct: 357 HAVINLSDAFSSLKKLKVLRIKGYVFKELNSLNLFPLHNLPNLEVLDLGTNFIK-IANLS 415
Query: 532 FYFSFK-LRILNISHNRL 548
+ FK L+ +++S N++
Sbjct: 416 IFNQFKTLKFIDLSVNKI 433
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 93/390 (23%), Positives = 165/390 (42%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L+++ ++ FI PS F ++ L L N+ + L F + +E LD S+N+L
Sbjct: 499 LDLSRNNIFFIKPSDFQHLSFLKCLNLS-GNSISQTLNGSEFQPL--VELKYLDFSNNRL 555
Query: 109 SVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
+L YS + H + E + IT + N ++L K + K
Sbjct: 556 DLL-----YSTAFEELH-------NLEVLDISSNSHYFQSEGITHML-NFTKNL-KVLRK 601
Query: 169 AKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDL--NGN-----LFRHLYNLQELSLSF 221
N N+ S R R N + L +G+ F++L NL+EL +S
Sbjct: 602 LMMNYNDIATSTS-RTMESESLQILEFRGNHLDILWRDGDNRYLKFFKNLLNLEELDISE 660
Query: 222 NKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIR 281
N L + L VFD L +S + F + L ++L LE L + N +K +
Sbjct: 661 NSLSFLPLG--VFDSMPP-NLKTLSLAKNGLKSFSWERL-QSLKNLETLDLSFNQLKTVP 716
Query: 282 NYSLYNLT-SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN--L 338
L N + SL + L+ N+I + +L+ + LS+N +++I+ +F L
Sbjct: 717 E-RLSNCSRSLKKLILKNNQIRCLTKYFLQGAF--QLRHLDLSSNKIQVIQKTSFPENVL 773
Query: 339 KELNTITLSYN-LLKSIKTTSFKNLNNMLNIVLSF--NQIKYIYPNAFVNLPNLVKLDLQ 395
LN + L +N L + F N + + + + + P A ++V LDL
Sbjct: 774 NNLNILFLHHNRFLCNCDAVWFVWWVNHTEVTIPYLATDVTCMGPGAHKG-QSVVSLDLY 832
Query: 396 DNKLKDFNLNVFS-NITSKQTPMNLNLSNN 424
+L N +FS +I++ + M + ++N+
Sbjct: 833 TCELDLTNFILFSLSISAVLSLMMITIANH 862
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 167 (63.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 76/299 (25%), Positives = 136/299 (45%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
NT E L ++ NNI I L L + L N+IS I F ++ K L+ +RL+
Sbjct: 56 NT-ERLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQ-DL-KELERLRLNR 112
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N L+L F +L + LS N +++I +F+ ++ N+ L +NQI I AF
Sbjct: 113 NNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFR 172
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT-NL-YEND-KKQAP--- 438
L +L L L +N + ++ F+++ +T L+ +N Y +L + +D +Q P
Sbjct: 173 ALRDLEVLTLNNNNITRLSVASFNHMPKLRT-FRLHSNNLYCDCHLAWLSDWLRQRPRVG 231
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN-EIKHLDATAFGNLDVLELLSLEH 497
+Y + + S+ R V + F S + ++ + + H A + ++++
Sbjct: 232 LYTQCMGPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGL 291
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
I + T + I L N I ++ F KLR L++S+N++ L D F
Sbjct: 292 TEIPTNLPET------ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAF 344
Score = 162 (62.1 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 51/162 (31%), Positives = 85/162 (52%)
Query: 274 NNNIKNIRNYSLYNL-TSL----NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + T+L I LE N I I F + +K+L+ + LSNN +
Sbjct: 280 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAF--SPYKKLRRLDLSNNQIS 337
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ D F L+ LN++ L N + + + F+ L ++ ++L+ N+I + +AF +L N
Sbjct: 338 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 397
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
L L L DNKL+ FS + + QT M+L N +I + +
Sbjct: 398 LNLLSLYDNKLQTVAKGTFSALRAIQT-MHL-AQNPFICDCH 437
Score = 145 (56.1 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 85/343 (24%), Positives = 149/343 (43%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N+ ++E +F+KL QL +I+FS + + + + + + +
Sbjct: 529 ELRLNNNEFTVLEATG----IFKKLPQLRKINFSNNKITDIEEGAF-EGASGVNEILLTS 583
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N ++N+++ L SL + L N+IS + N+ F RL + L +N + +
Sbjct: 584 NRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRL--LSLYDNQITTVAPGA 641
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP-NAFVNLPNLVK-L 392
F +L L+T+ NLL + F N N L + + + K I N P +K +
Sbjct: 642 FDSLHSLSTL----NLLAN----PF-NCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEI 692
Query: 393 DLQDNKLKDFNLNVFSNITS----KQTPMNLNLSNNYITNLYENDK---KQAPIYIKSLD 445
+QD ++DF + ++ S + P + + + K K P + L
Sbjct: 693 PIQDVAIQDFTCDDGNDDNSCSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIPKDVTELY 752
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L + L + L N I L +F N+ L L L +N + +
Sbjct: 753 LDGNQFTLVPKE-LSNYKH-LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 810
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
RTF G+ +L+++ L N+IS++ F L L I N L
Sbjct: 811 RTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 853
Score = 137 (53.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 80/389 (20%), Positives = 163/389 (41%)
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMT--LDLSHNKLSVLNMATLYSNVTKLQHLG 127
C T+ +N ++ ++P ++I Q T L L++N+ +VL ++ + +L+ +
Sbjct: 504 CEGTTVDCSNQRLNKIP-------DHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKIN 556
Query: 128 TTILK--DREKXXXXXXXXXXRC----NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVS 181
+ K D E+ N++ ++ +F+ L+ S+ +N +
Sbjct: 557 FSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLE-SLKTLMLRSNRISCVGN 615
Query: 182 DREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQ 241
D N+IT + F L++L L+L N N ++ + E L+
Sbjct: 616 DSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFNC---NCHLAWLGEWLR 672
Query: 242 LLEISFSLFNSNEFPYYILN---KNLNTLEWLAMDNNNIKNIRNYSLY--NLTSLNYINL 296
I + PY++ +++ ++ D N+ + S T L+ +
Sbjct: 673 RKRIVTGNPRCQK-PYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPSECTCLDTVVR 731
Query: 297 EYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKT 356
NK K+ I K + E+ L N L+ + N K L I LS N + ++
Sbjct: 732 CSNKGLKVLPK----GIPKDVTELYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSN 786
Query: 357 TSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-----DFN-LNVFSNI 410
SF N+ +L ++LS+N+++ I P F L +L L L N + FN L+ S++
Sbjct: 787 QSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 846
Query: 411 TSKQTPMNLNLSNNYITNLYENDKKQAPI 439
P+ + + ++++ +++ K+ I
Sbjct: 847 AIGANPLYCDCNMQWLSDWVKSEYKEPGI 875
Score = 129 (50.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P I + L N I+ +P + LR+L L N+I L AF L L L L
Sbjct: 299 PETITEIRLEQNSIRVIPPGAFSPYK-KLRRLDLSNNQISELAPDAFQGLRSLNSLVLYG 357
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + K F G+ +LQ++ L+ N+I+ L + F L +L++ N+L+++ + FS
Sbjct: 358 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFS 417
Query: 558 NT-IIEKLDISYN 569
I+ + ++ N
Sbjct: 418 ALRAIQTMHLAQN 430
Score = 118 (46.6 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 414 QTPMNLNLSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLD 472
Q L L+NN T L K+ P ++ ++ SNN+I ++ + A + ++ L
Sbjct: 525 QYTAELRLNNNEFTVLEATGIFKKLP-QLRKINFSNNKITDIEEGAFEG-ASGVNEILLT 582
Query: 473 FNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQF 532
N ++++ F L+ L+ L L N I+ V +FIG+ +++++ L N+I+ + F
Sbjct: 583 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAF 642
Query: 533 YFSFKLRILNISHN 546
L LN+ N
Sbjct: 643 DSLHSLSTLNLLAN 656
Score = 118 (46.6 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 43/168 (25%), Positives = 80/168 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI + + + L+ N + I F L+ L + L N + +I+ +F++L + + L+
Sbjct: 52 NIPRNTERLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLN 111
Query: 372 FNQIKYIYPNA-FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
N ++ ++P F+ L +LDL +N+++ F + NL L N I+ +
Sbjct: 112 RNNLQ-LFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIK---NLQLDYNQISCI- 166
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPV-NF-----LQTFADSLRKLYLD 472
E+ +A ++ L L+NN I + V +F L+TF LY D
Sbjct: 167 EDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 214
Score = 107 (42.7 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 37/148 (25%), Positives = 71/148 (47%)
Query: 226 IIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSL 285
+ E+ +N+ + +++L + S + F Y K L L+ + NN I + +
Sbjct: 291 LTEIPTNLPETITEIRLEQNSIRVIPPGAFSPY---KKLRRLD---LSNNQISELAPDAF 344
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
L SLN + L NKI+++ +LF +L + L+ N + + D F +L LN ++
Sbjct: 345 QGLRSLNSLVLYGNKITELPKSLFEGLFSLQL--LLLNANKINCLRVDAFQDLHNLNLLS 402
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L N L+++ +F L + + L+ N
Sbjct: 403 LYDNKLQTVAKGTFSALRAIQTMHLAQN 430
Score = 100 (40.3 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y L L+NN + + LRK+ N+I ++ AF G V E+L L
Sbjct: 524 PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL-LT 582
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + V + F G+ +L+ + L N IS + + F +R+L++ N++ ++ F
Sbjct: 583 SNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAF 642
Query: 557 SN 558
+
Sbjct: 643 DS 644
Score = 96 (38.9 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 37/137 (27%), Positives = 63/137 (45%)
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIA 501
++D SN R+ ++P + Q A+ LR L+ NE L+AT F L L ++ +N I
Sbjct: 508 TVDCSNQRLNKIPDHIPQYTAE-LR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKIT 563
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-I 560
+ + F G + I L+ N + + + F L+ L + NR+ + D F
Sbjct: 564 DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGS 623
Query: 561 IEKLDISYNQ-DKIRPG 576
+ L + NQ + PG
Sbjct: 624 VRLLSLYDNQITTVAPG 640
Score = 95 (38.5 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+LYLD N+ L N L L+ L +N I+ + ++F M L + LS+N + +
Sbjct: 750 ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCI 808
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
F LR+L++ N + +P F++ + + L I N
Sbjct: 809 PPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 851
Score = 94 (38.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 74/343 (21%), Positives = 139/343 (40%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHL---GTTI--LKGDQLQGIFNSKLRELEITGKDLK 57
LDLS+N++S L + + L L G I L +G+F+ +L L + +
Sbjct: 329 LDLSNNQISEL-APDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQL--LLLNANKIN 385
Query: 58 FIDPSAFDNIDACYDLTL-KITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSV---LNM 113
+ AF ++ ++L L + + +++ + G F + I+ T+ L+ N L
Sbjct: 386 CLRVDAFQDL---HNLNLLSLYDNKLQTVAKGTFSALRAIQ--TMHLAQNPFICDCHLKW 440
Query: 114 ATLYSNVTKLQHLGTTILKDRE---KXXXXXXXXXXRCNKITD----LNGNLFRHL---Q 163
Y + ++ G R K RC+ D L+G+ F L +
Sbjct: 441 LADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPE 500
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGN-LFRHLYNLQELSLSFN 222
K + + +N+ + N+ T L +F+ L L++++ S N
Sbjct: 501 KCRCEGTTVDCSNQRLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNN 560
Query: 223 KLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRN 282
K+ IE F+ + EI + N E + + K L +L+ L + +N I + N
Sbjct: 561 KITDIE--EGAFEGASGVN--EILLTS-NRLENVQHKMFKGLESLKTLMLRSNRISCVGN 615
Query: 283 YSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
S L S+ ++L N+I+ + F ++H L + L N
Sbjct: 616 DSFIGLGSVRLLSLYDNQITTVAPGAFD-SLHS-LSTLNLLAN 656
Score = 93 (37.8 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 27/69 (39%), Positives = 37/69 (53%)
Query: 488 DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR 547
DV EL L+ N +V K +L +IDLS N IS L+ + F +L L +S+NR
Sbjct: 747 DVTELY-LDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 548 LRSLPRDVF 556
LR +P F
Sbjct: 805 LRCIPPRTF 813
Score = 83 (34.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQII-ELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+I+ + F+ L L+ L L+ N LQ+ EL +F KL L++S + + P
Sbjct: 89 NRISTIERGAFQDLKELERLRLNRNNLQLFPEL---LFLGTAKLYRLDLSENQIQA--IP 143
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
++ ++ L +D N I I + + L L + L N I+++ ++ FN +
Sbjct: 144 RKAFRGAVD-IKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRL--SVASFNHMPK 200
Query: 317 LKEIRLSNNYL 327
L+ RL +N L
Sbjct: 201 LRTFRLHSNNL 211
Score = 80 (33.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 40 GIFN--SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F+ KLR L+++ + + P AF + + L L +I ELP LF+ + +++
Sbjct: 318 GAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY--GNKITELPKSLFEGLFSLQ 375
Query: 98 QMTLDLSH-NKLSV--------LNMATLYSNVTKLQ 124
+ L+ + N L V LN+ +LY N KLQ
Sbjct: 376 LLLLNANKINCLRVDAFQDLHNLNLLSLYDN--KLQ 409
Score = 74 (31.1 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
K + + +NN + D + NKIT+L +LF L++LQ L L+ NK
Sbjct: 324 KKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 383
Query: 224 LQIIELNSNVFDVFEKLQLLEI 245
+ + +++ F L LL +
Sbjct: 384 INCLRVDA--FQDLHNLNLLSL 403
Score = 50 (22.7 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 38/182 (20%), Positives = 74/182 (40%)
Query: 2 TLDLSHNK-LSVLNMATLYSNVTKLQHLGTTI-LKGDQLQGIFNSKLRE---LEITGKDL 56
TL LS LS+LN + + G+T+ G L+ + + R L++ G ++
Sbjct: 8 TLSLSLGLVLSILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNI 67
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH----NKLSVLN 112
I F + + L++ +I + G F ++ +E++ L+ ++ +L L
Sbjct: 68 TRITKIDFAGLR--HLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLG 125
Query: 113 MATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKN 172
A LY + ++ I + + N+I+ + FR L+ V N
Sbjct: 126 TAKLY-RLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNN 184
Query: 173 NN 174
NN
Sbjct: 185 NN 186
>UNIPROTKB|E9PGH4 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9606 "Homo
sapiens" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0032722 "positive regulation
of chemokine production" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046330
"positive regulation of JNK cascade" evidence=IEA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0009986 GO:GO:0043123
GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032755 GO:GO:0004872
GO:GO:0005622 GO:GO:0009615 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 GO:GO:0003725 GO:GO:0051092 GO:GO:0001934
GO:GO:0071346 GO:GO:0035458 GO:GO:0032760 GO:GO:0002224
GO:GO:0052033 GO:GO:0032735 GO:GO:0002282 GO:GO:0032728
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0071360 PANTHER:PTHR24365:SF5
HGNC:HGNC:11849 GO:GO:0034346 EMBL:AC104070 IPI:IPI00966006
ProteinModelPortal:E9PGH4 SMR:E9PGH4 Ensembl:ENST00000504367
ArrayExpress:E9PGH4 Bgee:E9PGH4 Uniprot:E9PGH4
Length = 627
Score = 224 (83.9 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 98/377 (25%), Positives = 172/377 (45%)
Query: 217 LSLSFNKLQIIELNSNV--------FDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
L LS+N L ++ +S F + +Q L S SL Y L ++ T +
Sbjct: 2 LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL-FSHSLHGLFNVRYLNLKRSF-TKQ 59
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+++ + + I ++S L L ++N+E N I I +N+F I+ LK + LSN++
Sbjct: 60 SISLAS--LPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLIN--LKYLSLSNSFTS 115
Query: 329 L--IESDTFYNLKE--LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI-KYIYPNAF 383
L + ++TF +L L+ + L+ N + I++ +F L ++ + L N+I + + +
Sbjct: 116 LRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEW 175
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IK 442
L N+ ++ L NK N F+ + S Q L L + N+ + P+ +
Sbjct: 176 RGLENIFEIYLSYNKYLQLTRNSFALVPSLQ---RLMLRRVALKNVDSSPSPFQPLRNLT 232
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL--DATAFG------NLDVLELLS 494
LDLSNN I + + L+ + L L L N + L A G L L +L+
Sbjct: 233 ILDLSNNNIANINDDMLEGL-EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILN 291
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
LE N + F + L+IIDL N ++ L F L+ LN+ N + S+ +
Sbjct: 292 LESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK 351
Query: 555 VFSNTI--IEKLDISYN 569
VF + +LD+ +N
Sbjct: 352 VFGPAFRNLTELDMRFN 368
Score = 138 (53.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 77/320 (24%), Positives = 133/320 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLS--FNKLQIIELNSNVFDVFEKLQLLEIS---FSLFNS 252
N I + N+F L NL+ LSLS F L+ + + V L +L ++ S S
Sbjct: 88 NDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIES 147
Query: 253 NEFPYYILNKNLNTLEWLAMDNNNI-KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+ F + L LE L + N I + + L ++ I L YNK ++ N F
Sbjct: 148 DAFSW------LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRN--SF 199
Query: 312 NIHKRLKEIRLSNNYLELIESDT--FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ L+ + L L+ ++S F L+ L + LS N + +I + L + +
Sbjct: 200 ALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILD 259
Query: 370 LSFNQIKYIYPNA-------FVN-LPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLN 420
L N + ++ +A F+ L +L L+L+ N + + VF ++ K + LN
Sbjct: 260 LQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLN 319
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
N +++ N + +KSL+L N I V +L +L + FN D
Sbjct: 320 NLNTLPASVFNNQ-----VSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF---D 371
Query: 481 ATAFGNLDVLELLSLEHNNI 500
T + ++ H NI
Sbjct: 372 CTCESIAWFVNWINETHTNI 391
Score = 62 (26.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 30/125 (24%), Positives = 53/125 (42%)
Query: 3 LDLSHNKLSVL---NMATLYS-NVTKLQHLGTTILKGDQLQGIFNSKLRELE--ITGKDL 56
LDLS+N L+V+ + A L L++ L L G+FN + L+ T + +
Sbjct: 2 LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 61
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELP---SGLFDKIENIEQMTLDLSHNKLSVLNM 113
D+ + L+ N + ++P S +F + N++ ++L S L L
Sbjct: 62 SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTN 121
Query: 114 ATLYS 118
T S
Sbjct: 122 ETFVS 126
>FB|FBgn0038504 [details] [associations]
symbol:Sur-8 "Sur-8" species:7227 "Drosophila melanogaster"
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AE014297 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
OMA:LPHGIGN PANTHER:PTHR23155:SF38 ChiTaRS:SHOC2 EMBL:AY128499
EMBL:BT003235 RefSeq:NP_650620.3 RefSeq:NP_732231.2
UniGene:Dm.13957 ProteinModelPortal:Q9VEK6 SMR:Q9VEK6 STRING:Q9VEK6
PaxDb:Q9VEK6 PRIDE:Q9VEK6 EnsemblMetazoa:FBtr0083447
EnsemblMetazoa:FBtr0083448 EnsemblMetazoa:FBtr0333933 GeneID:42093
KEGG:dme:Dmel_CG5407 UCSC:CG5407-RA CTD:42093 FlyBase:FBgn0038504
InParanoid:Q8MQM0 OrthoDB:EOG4C867K PhylomeDB:Q9VEK6
GenomeRNAi:42093 NextBio:827133 Bgee:Q9VEK6 Uniprot:Q9VEK6
Length = 641
Score = 224 (83.9 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 104/359 (28%), Positives = 168/359 (46%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
R N+IT + +L R L NL LSL NK++ EL S + L L++S + +
Sbjct: 260 RFNRITAVADDL-RQLVNLTMLSLRENKIR--ELGSAI-GALVNLTTLDVSHN--HLEHL 313
Query: 256 PYYILN-KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
P I N NL+ L+ + +N + +I + S+ NL SL + + YN++S + L +
Sbjct: 314 PEDIGNCVNLSALD---LQHNELLDIPD-SIGNLKSLVRLGMRYNRLSSVPATLKNC--- 366
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
K + E + N + + +L L TITLS N S T N+ +I L N+
Sbjct: 367 KSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNR 426
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
I I F L KL++++N L L++ + + + LNL+ N + L ++
Sbjct: 427 IDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNM----VELNLATNALQKLPDDIM 482
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLS 494
+ I L LSNN ++++P N + LR L L+ N I+ L G L L+ L
Sbjct: 483 NLQNLEI--LILSNNMLKKIP-NTIGNLR-KLRILDLEENRIEVLPHE-IGLLHELQRLI 537
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR-LRSLP 552
L+ N I ++ R+ + NL + +S N + L E+ L L I+ N L LP
Sbjct: 538 LQTNQITML-PRSIGHLGNLTHLSVSENNLQFLP-EEIGSLESLENLYINQNPGLEKLP 594
Score = 201 (75.8 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 81/320 (25%), Positives = 150/320 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L L + +N+++++ + N +L+ ++L++N++ I +++ + K L + +
Sbjct: 297 LVNLTTLDVSHNHLEHLPE-DIGNCVNLSALDLQHNELLDIPDSIGNL---KSLVRLGMR 352
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N L + + T N K ++ + N + + +L+ + I LS NQ YP
Sbjct: 353 YNRLSSVPA-TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFAS-YPTGG 410
Query: 384 -VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
N+ ++L+ N++ +FS LN+ N +T L + + +
Sbjct: 411 PAQFTNVYSINLEHNRIDKIPYGIFSRAKGLT---KLNMKENMLTALPLDIGTW--VNMV 465
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L+L+ N +Q++P + + +L L L N +K + T GNL L +L LE N I V
Sbjct: 466 ELNLATNALQKLPDDIMNL--QNLEILILSNNMLKKIPNT-IGNLRKLRILDLEENRIEV 522
Query: 503 VVKRTFIGMPN-LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTII 561
+ IG+ + LQ + L N+I+ML + L L++S N L+ LP ++ S +
Sbjct: 523 LPHE--IGLLHELQRLILQTNQITMLPRSIGHLG-NLTHLSVSENNLQFLPEEIGSLESL 579
Query: 562 EKLDISYNQDKIRPGRESNP 581
E L I+ N PG E P
Sbjct: 580 ENLYINQN-----PGLEKLP 594
Score = 171 (65.3 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 72/313 (23%), Positives = 145/313 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L +L L + N I + + L L +L ++L NKI ++ + + L + +S
Sbjct: 251 LRSLTTLYLRFNRITAVAD-DLRQLVNLTMLSLRENKIRELGSAI---GALVNLTTLDVS 306
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
+N+LE + D N L+ + L +N L I S NL +++ + + +N++ + P
Sbjct: 307 HNHLEHLPED-IGNCVNLSALDLQHNELLDIPD-SIGNLKSLVRLGMRYNRLSSV-PATL 363
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ-APIYIK 442
N ++ + +++ N + + ++++ T + LS N + Q +Y
Sbjct: 364 KNCKSMDEFNVEGNGITQLPDGMLASLSGLTT---ITLSRNQFASYPTGGPAQFTNVY-- 418
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
S++L +NRI ++P A L KL + N + L ++++EL +L N +
Sbjct: 419 SINLEHNRIDKIPYGIFSR-AKGLTKLNMKENMLTALPLDIGTWVNMVEL-NLATNALQK 476
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
+ + + NL+I+ LS N + + KLRIL++ NR+ LP ++ ++
Sbjct: 477 LPD-DIMNLQNLEILILSNNMLKKIPNTIGNLR-KLRILDLEENRIEVLPHEIGLLHELQ 534
Query: 563 KLDISYNQDKIRP 575
+L + NQ + P
Sbjct: 535 RLILQTNQITMLP 547
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 75/324 (23%), Positives = 150/324 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L +L LA++ N++ ++ SL N + L ++L +NK+++I ++ + L + L
Sbjct: 205 LVSLRNLALNENSLTSLPE-SLQNCSQLKVLDLRHNKLAEIPPVIYRL---RSLTTLYLR 260
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N + + +D L L ++L N ++ + + + L N+ + +S N ++++ P
Sbjct: 261 FNRITAV-ADDLRQLVNLTMLSLRENKIRELGS-AIGALVNLTTLDVSHNHLEHL-PEDI 317
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
N NL LDLQ N+L L++ +I + ++ + L + N ++++ K KS
Sbjct: 318 GNCVNLSALDLQHNEL----LDIPDSIGNLKSLVRLGMRYNRLSSVPATLKN-----CKS 368
Query: 444 LDLSN---NRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
+D N N I ++P L + + L + L N+ + ++LEHN I
Sbjct: 369 MDEFNVEGNGITQLPDGMLASLS-GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRI 427
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI 560
+ F L +++ N ++ L + + + LN++ N L+ LP D+ +
Sbjct: 428 DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE-LNLATNALQKLPDDIMNLQN 486
Query: 561 IEKLDISYNQDKIRPGRESNPRPI 584
+E L +S N K P N R +
Sbjct: 487 LEILILSNNMLKKIPNTIGNLRKL 510
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 85/373 (22%), Positives = 163/373 (43%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLREL-EITGKDLKFIDP 61
LDL HNKL+ + +Y +L+ L T L+ +++ + + LR+L +T L+
Sbjct: 234 LDLRHNKLAEIP-PVIY----RLRSLTTLYLRFNRITAVADD-LRQLVNLTMLSLRENKI 287
Query: 62 SAFDN-IDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
+ I A +LT L +++ +E LP + + + N+ LDL HN+L L++ N
Sbjct: 288 RELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV-NLS--ALDLQHNEL--LDIPDSIGN 342
Query: 120 VTKLQHLGT-----TILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNN 174
+ L LG + + K N IT L + L + + N
Sbjct: 343 LKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLS-GLTTITLSRN 401
Query: 175 NNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVF 234
+ N+I + +F L +L++ N L + L
Sbjct: 402 QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPL----- 456
Query: 235 DVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYI 294
D+ + ++E++ + + P I+N L LE L + NN +K I N ++ NL L +
Sbjct: 457 DIGTWVNMVELNLATNALQKLPDDIMN--LQNLEILILSNNMLKKIPN-TIGNLRKLRIL 513
Query: 295 NLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+LE N+I + + + +H+ L+ + L N + ++ + +L L +++S N L+ +
Sbjct: 514 DLEENRIEVLPHEIGL--LHE-LQRLILQTNQITMLPR-SIGHLGNLTHLSVSENNLQFL 569
Query: 355 --KTTSFKNLNNM 365
+ S ++L N+
Sbjct: 570 PEEIGSLESLENL 582
Score = 57 (25.1 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 31/110 (28%), Positives = 55/110 (50%)
Query: 4 DLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSA 63
+L+ N+ S+ ++ N ++L+ L K ++ + +LR L T L+F +A
Sbjct: 210 NLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIY-RLRSL--TTLYLRFNRITA 266
Query: 64 F-DNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
D++ +LT L + +I EL S + + N+ TLD+SHN L L
Sbjct: 267 VADDLRQLVNLTMLSLRENKIRELGSAI-GALVNLT--TLDVSHNHLEHL 313
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 178 (67.7 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 80/290 (27%), Positives = 125/290 (43%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L ++NN + ++ L L INL NKI+ I F + + E+ L++N LE
Sbjct: 434 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAF--DGASGVNELLLTSNRLE 491
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F L+ L T+ L N + + SF L+++ + L NQI + P +F L +
Sbjct: 492 TVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHS 551
Query: 389 LVKLDLQDNKLK-DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
L L+L N + +L + K+ + N L E + I + D
Sbjct: 552 LSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDG 611
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG-NLDVLELLSLEHNNIAVVVKR 506
N+ P++ L + N K L A G DV EL L+ N +V K
Sbjct: 612 NDDNSCSPLSRCPAECTCLDTVVRCSN--KGLKALPKGIPKDVTELY-LDGNQFTLVPKE 668
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+L +IDLS N IS L+ + F +L L +S+NRLR +P F
Sbjct: 669 -LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTF 717
Score = 163 (62.4 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 50/156 (32%), Positives = 79/156 (50%)
Query: 274 NNNIKNIRNYSLYNL-TSL----NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + T+L I LE N I I F + +K+L+ I LSNN +
Sbjct: 173 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAF--SPYKKLRRIDLSNNQIS 230
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
D F L+ LN++ L N + + F+ L ++ ++L+ N+I + +AF +L N
Sbjct: 231 EAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 290
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L L L DNKL+ FS + + QT +L+ N
Sbjct: 291 LNLLSLYDNKLQTIAKGTFSPLRAIQTLYERHLAQN 326
Score = 142 (55.0 bits), Expect = 9.8e-10, Sum P(3) = 9.8e-10
Identities = 85/343 (24%), Positives = 146/343 (42%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDN 274
EL L+ N+ ++E +F+KL QL +I+ S + + E L + +
Sbjct: 433 ELRLNNNEFSVLEATG----IFKKLPQLRKINLSNNKITDIEEGAFDGASGVNE-LLLTS 487
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N ++ +R+ L SL + L N++S + N+ F RL + L +N + + +
Sbjct: 488 NRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRL--LSLYDNQITTVAPGS 545
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP-NAFVNLPNLVK-L 392
F L L+T+ NLL + F N N L + + + K I N P +K +
Sbjct: 546 FDTLHSLSTL----NLLAN----PF-NCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEI 596
Query: 393 DLQDNKLKDFNLNVFSNITS----KQTPMNLNLSNNYITNLYENDK---KQAPIYIKSLD 445
+QD ++DF + ++ S + P + + + K K P + L
Sbjct: 597 PIQDVAIQDFTCDDGNDDNSCSPLSRCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELY 656
Query: 446 LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
L N+ VP L + L + L N I L +F N+ L L L +N + +
Sbjct: 657 LDGNQFTLVPKE-LSNYKH-LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPA 714
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
RTF G+ +L+++ L N+IS++ F L L I N L
Sbjct: 715 RTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 757
Score = 128 (50.1 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 38/141 (26%), Positives = 71/141 (50%)
Query: 297 EYNKISKIHNNLFHF----NIHKRLKEIR---LSNNYLELIESDTFYNLKELNTITLSYN 349
+Y +++NN F I K+L ++R LSNN + IE F +N + L+ N
Sbjct: 429 QYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSN 488
Query: 350 LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN 409
L++++ FK L ++ ++L N++ + ++F L ++ L L DN++ F
Sbjct: 489 RLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDT 548
Query: 410 ITSKQTPMNLNLSNNYITNLY 430
+ S T +NL L+N + N +
Sbjct: 549 LHSLST-LNL-LANPFNCNCH 567
Score = 123 (48.4 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 34/133 (25%), Positives = 65/133 (48%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I K + E+ L N L+ + N K L I LS N + ++ SF N+ +L ++LS+
Sbjct: 648 IPKDVTELYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 706
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLK-----DFN-LNVFSNITSKQTPMNLNLSNNYI 426
N+++ I F L +L L L N + FN L+ S++ P+ + + ++
Sbjct: 707 NRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWL 766
Query: 427 TNLYENDKKQAPI 439
++ +++ K+ I
Sbjct: 767 SDWVKSEYKEPGI 779
Score = 121 (47.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 35/120 (29%), Positives = 59/120 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
P I + L N I+ +P + LR++ L N+I AF L L L L
Sbjct: 192 PETITEIRLEQNSIKVIPPGAFSPYK-KLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYG 250
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
N I + K F G+ +LQ++ L+ N+I+ L + F L +L++ N+L+++ + FS
Sbjct: 251 NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 310
Score = 121 (47.7 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 42/134 (31%), Positives = 64/134 (47%)
Query: 385 NLPNLV-KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
NLP + ++ L+ N +K FS + ++LSNN I+ D Q + S
Sbjct: 190 NLPETITEIRLEQNSIKVIPPGAFSPYKKLR---RIDLSNNQISEAAP-DAFQGLRSLNS 245
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N+I E+P + SL+ L L+ N+I L AF +L L LLSL N + +
Sbjct: 246 LVLYGNKITELPKGLFEGLF-SLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 304
Query: 504 VKRTFIGMPNLQII 517
K TF + +Q +
Sbjct: 305 AKGTFSPLRAIQTL 318
Score = 117 (46.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
L+ N+ + + L ++ K L I LSNN + + + +F N+ +L T+ LSYN L+ I
Sbjct: 657 LDGNQFTLVPKELSNY---KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 713
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK-DFNLNVFSN 409
+F L ++ + L N I + AF +L L L + N L D N+ S+
Sbjct: 714 ARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 768
Score = 105 (42.0 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y L L+NN + + LRK+ L N+I ++ AF G V ELL L
Sbjct: 428 PQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELL-LT 486
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
N + V + F G+ +L+ + L N +S + + F +R+L++ N++ ++
Sbjct: 487 SNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTV 541
Score = 104 (41.7 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 85/313 (27%), Positives = 129/313 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI L + F+ L+NL LSL NKLQ I + F L+ ++ + + P+
Sbjct: 275 NKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT-----FSPLRAIQTLYERHLAQN-PF 328
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
I + +L +WLA D + I S TS L +I +I + F + K
Sbjct: 329 -ICDCHL---KWLA-DYLHTNPIET-SGARCTSPR--RLANKRIGQIKSKKFRCSA-KEQ 379
Query: 318 KEIRLSNNYLELIESDTFYNLK-------ELNTITLSYNLLKSI-----KTTSFKNLNNM 365
I + +Y + D F +L E T+ S L I + T+ LNN
Sbjct: 380 YFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNN 439
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
VL I F LP L K++L +NK+ D F + L L++N
Sbjct: 440 EFSVLEATGI-------FKKLPQLRKINLSNNKITDIEEGAFDGASGVN---ELLLTSNR 489
Query: 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG 485
+ + + K +K+L L +NR+ V N T S+R L L N+I + +F
Sbjct: 490 LETVRDKMFKGLES-LKTLMLRSNRVSCVG-NDSFTGLSSVRLLSLYDNQITTVAPGSFD 547
Query: 486 NLDVLELLSLEHN 498
L L L+L N
Sbjct: 548 TLHSLSTLNLLAN 560
Score = 102 (41.0 bits), Expect = 7.9e-15, Sum P(3) = 7.9e-15
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLELLSLEHNNIA 501
++D SN ++ ++P + Q A+ L L+ NE L+AT F L L ++L +N I
Sbjct: 412 TVDCSNQKLNKIPDHIPQYTAE----LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKIT 467
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TI 560
+ + F G + + L+ N + + + F L+ L + NR+ + D F+ +
Sbjct: 468 DIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSS 527
Query: 561 IEKLDISYNQ-DKIRPG 576
+ L + NQ + PG
Sbjct: 528 VRLLSLYDNQITTVAPG 544
Score = 100 (40.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+D + E+P N +T + + L+ N IK + AF L + L +N I+
Sbjct: 177 VDCRGKGLTEIPTNLPETITE----IRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEA 232
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
F G+ +L + L N+I+ L F F L++L ++ N++ L D F +
Sbjct: 233 APDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQD 287
Score = 97 (39.2 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+LYLD N+ L N L L+ L +N I+ + ++F M L + LS+N + +
Sbjct: 654 ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCI 712
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
F LR+L++ N + +P F++ + + L I N
Sbjct: 713 PARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 755
Score = 90 (36.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 321 RLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
RL N + +N ++ LS N +++I +F+ ++ N+ L +NQI I
Sbjct: 1 RLKQNSSHFLPPVGVWNELKIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIED 60
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
AF L +L L L +N + ++ F+++ +T L+ +N Y
Sbjct: 61 GAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT-FRLHSNNLY 104
Score = 84 (34.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
++K LS N ++ I F ++ + L YN + I+ +F+ L ++ + L+ N I
Sbjct: 20 KIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI 79
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKL 399
+ +F ++P L L N L
Sbjct: 80 TRLSVASFNHMPKLRTFRLHSNNL 103
Score = 81 (33.6 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 40 GIFN--SKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F+ KLR ++++ + P AF + + L L +I ELP GLF+ + +++
Sbjct: 211 GAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLY--GNKITELPKGLFEGLFSLQ 268
Query: 98 QMTLDLSH-NKLSV--------LNMATLYSNVTKLQ 124
+ L+ + N L V LN+ +LY N KLQ
Sbjct: 269 LLLLNANKINCLRVDAFQDLHNLNLLSLYDN--KLQ 302
Score = 81 (33.6 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 263 NL-NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
NL T+ + ++ N+IK I + L I+L N+IS+ + F + + L +
Sbjct: 190 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQ-GL-RSLNSLV 247
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N + + F L L + L+ N + ++ +F++L+N+ + L N+++ I
Sbjct: 248 LYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 307
Query: 382 AF 383
F
Sbjct: 308 TF 309
Score = 79 (32.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 28/111 (25%), Positives = 58/111 (52%)
Query: 2 TLDLSHNKLSVL-NMATLYSNVTKLQHLGTTILKGDQLQGIFNS--KLRELEITGKDLKF 58
T+D S+ KL+ + + Y+ +L + ++L+ GIF +LR++ ++ +
Sbjct: 412 TVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEAT---GIFKKLPQLRKINLSNNKITD 468
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLS 109
I+ AFD +L L T+ ++E + +F +E+++ TL L N++S
Sbjct: 469 IEEGAFDGASGVNELLL--TSNRLETVRDKMFKGLESLK--TLMLRSNRVS 515
Score = 74 (31.1 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
K + + +NN + D + NKIT+L LF L++LQ L L+ NK
Sbjct: 217 KKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANK 276
Query: 224 LQIIELNSNVFDVFEKLQLLEI 245
+ + +++ F L LL +
Sbjct: 277 INCLRVDA--FQDLHNLNLLSL 296
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 221 FNKLQIIELNSNVF-----DVFEKLQLLEISFSLFNSN--EFPYYILNKNLNTLEWLAMD 273
+ KL+ I+L++N D F+ L+ L S L+ + E P + + L +L+ L ++
Sbjct: 216 YKKLRRIDLSNNQISEAAPDAFQGLRSLN-SLVLYGNKITELPKGLF-EGLFSLQLLLLN 273
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH-FNIHKRLKEIRLSNN 325
N I +R + +L +LN ++L NK+ I F + L E L+ N
Sbjct: 274 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLYERHLAQN 326
Score = 71 (30.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE 331
+ N I+ I + + + L+YN+IS I + F + L+ + L+NN + +
Sbjct: 26 LSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFR--ALRDLEVLTLNNNNITRLS 83
Query: 332 SDTFYNLKELNTITLSYNLL 351
+F ++ +L T L N L
Sbjct: 84 VASFNHMPKLRTFRLHSNNL 103
Score = 69 (29.3 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 28/106 (26%), Positives = 45/106 (42%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLNGNL 207
NKITD+ F S V +N + V D+ K R N+++ + +
Sbjct: 464 NKITDIEEGAFDGA--SGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDS 521
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
F L +++ LSL N++ + S FD L L + + FN N
Sbjct: 522 FTGLSSVRLLSLYDNQITTVAPGS--FDTLHSLSTLNLLANPFNCN 565
Score = 60 (26.2 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 20/87 (22%), Positives = 49/87 (56%)
Query: 40 GIFNS-KLRELEITGKDLKFIDPSAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIE 97
G++N K++ +++ ++ I AF D+ L++ QI + G F + ++E
Sbjct: 14 GVWNELKIKISDLSENQIQAIPRKAFRG---AVDIKNLQLDYNQISCIEDGAFRALRDLE 70
Query: 98 QMTLDLSHNKLSVLNMATLYSNVTKLQ 124
+TL+ +N ++ L++A+ ++++ KL+
Sbjct: 71 VLTLN--NNNITRLSVAS-FNHMPKLR 94
Score = 51 (23.0 bits), Expect = 3.2e-14, Sum P(3) = 3.2e-14
Identities = 20/81 (24%), Positives = 39/81 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I + FR +++ L L +N++ IE + F L+ LE+ +L N+N
Sbjct: 29 NQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA-----FRALRDLEV-LTLNNNNITRL 82
Query: 258 YILNKN-LNTLEWLAMDNNNI 277
+ + N + L + +NN+
Sbjct: 83 SVASFNHMPKLRTFRLHSNNL 103
Score = 51 (23.0 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 219 LSFNKLQIIELNS--NVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
LS N++Q I + D+ + LQL S F + L LE L ++NNN
Sbjct: 26 LSENQIQAIPRKAFRGAVDI-KNLQLDYNQISCIEDGAF------RALRDLEVLTLNNNN 78
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKI 301
I + S ++ L L N +
Sbjct: 79 ITRLSVASFNHMPKLRTFRLHSNNL 103
Score = 40 (19.1 bits), Expect = 2.4e-10, Sum P(4) = 2.4e-10
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 149 NKITDLNGNLFR---HLQKSIVKAKKNNNNNEDQVSD 182
NKIT+L LF LQ ++ A K N D D
Sbjct: 251 NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQD 287
>UNIPROTKB|Q9TSP2 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9555 "Papio
anubis" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=ISS]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR017241
InterPro:IPR027168 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0006954 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0042116 InterPro:IPR025875 Pfam:PF12799
GO:GO:0004888 GO:GO:0046696 SUPFAM:SSF52200 GO:GO:0001875
GO:GO:0032497 HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9
EMBL:AF180964 EMBL:AF180962 EMBL:AF180963 ProteinModelPortal:Q9TSP2
SMR:Q9TSP2 Uniprot:Q9TSP2
Length = 826
Score = 185 (70.2 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 85/332 (25%), Positives = 147/332 (44%)
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILN-----KNLNTLEWLAMDNNNIKNIRN 282
E N FD L ++ F YY+ N L ++ + NIK + +
Sbjct: 266 ERNLEEFDKSALEGLCNLTIEEFRLTYLDYYLDNIIDLFNCLANASSFSLVSVNIKRVED 325
Query: 283 YSLYNLT--SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE 340
+S YN L +N ++ + + + LK + + N S+ +L
Sbjct: 326 FS-YNFRWQHLELVNCKFEQFPTLEL--------ESLKRLTFTANKGGNAFSEV--DLPS 374
Query: 341 LNTITLSYNLL--KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
L + LS N L K + S ++ + LSFN + + N F+ L L LD Q +
Sbjct: 375 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNDVITMGSN-FLGLEQLEHLDFQHSN 433
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNF 458
LK ++ FS S + + L++S+ + T + N + +K L ++ N QE NF
Sbjct: 434 LKQ--MSQFSVFLSLRNLIYLDISHTHTTVAF-NGIFDGLLSLKVLKMAGNSFQE---NF 487
Query: 459 LQTFADSLRKL-YLDFNE--IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
L L+ L +LD ++ ++ L TAF L+ L++L++ HNN + + +P+LQ
Sbjct: 488 LPDIFTDLKNLTFLDLSQCQLEQLSPTAFDTLNKLQVLNMSHNNFFSLDVFPYKCLPSLQ 547
Query: 516 IIDLSFNEI-SMLTGEQFYFSFKLRILNISHN 546
++D S N I + E +F L LN++ N
Sbjct: 548 VLDYSLNHIMTSKNQEPQHFPSSLAFLNLTQN 579
Score = 129 (50.5 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 100/408 (24%), Positives = 173/408 (42%)
Query: 202 DLNGNLFRHLY--NLQEL-SLSFNKLQI-IELNSNVF---DVFEKLQLLEISF-SLFNS- 252
DL+ N +++Y +LQ L + L + + LN F F++++L +++ S F+
Sbjct: 181 DLSSNKIQNIYCKDLQVLHQMPLPNLSLDLSLNPINFIQPGAFKEIRLHKLTLRSNFDDL 240
Query: 253 NEFPYYILN-KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH---NNL 308
N I L + + N +N+ + L L + +E +++ + +N+
Sbjct: 241 NVMKTCIQGLAGLEVHRLVLGEFRNERNLEEFDKSALEGLCNLTIEEFRLTYLDYYLDNI 300
Query: 309 FH-FNIHKRLKEIRLSNNYLELIESDTFYNLK--ELNTITLSYNLLKSIKTTSFKNLNNM 365
FN L + ++ +E D YN + L + + +++ S K L
Sbjct: 301 IDLFNCLANASSFSLVSVNIKRVE-DFSYNFRWQHLELVNCKFEQFPTLELESLKRL--- 356
Query: 366 LNIVLSFNQIKYIYPNAF--VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLS 422
+F K NAF V+LP+L LDL N L F S T + L+LS
Sbjct: 357 -----TFTANKG--GNAFSEVDLPSLEFLDLSRNGLS-FK-GCCSQSDFGTTSLKYLDLS 407
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL-YLDFNEIKHLDA 481
N + + N + + LD ++ ++++ F F SLR L YLD I H
Sbjct: 408 FNDVITMGSNFLGLEQL--EHLDFQHSNLKQMS-QF-SVFL-SLRNLIYLD---ISHTHT 459
Query: 482 TA-----FGNLDVLELLSLEHNNIAV-VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
T F L L++L + N+ + F + NL +DLS ++ L+ F
Sbjct: 460 TVAFNGIFDGLLSLKVLKMAGNSFQENFLPDIFTDLKNLTFLDLSQCQLEQLSPTAFDTL 519
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDI-SYNQDKIRPGRESNPR 582
KL++LN+SHN SL DVF + L + Y+ + I + P+
Sbjct: 520 NKLQVLNMSHNNFFSL--DVFPYKCLPSLQVLDYSLNHIMTSKNQEPQ 565
Score = 123 (48.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 90/380 (23%), Positives = 155/380 (40%)
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL-FNSNEFPYYILNKNLNT 266
F +L NL+ L LS NK+Q I V ++ L +S L N F K +
Sbjct: 171 FSNLTNLEHLDLSSNKIQNIYCKD--LQVLHQMPLPNLSLDLSLNPINFIQPGAFKEIRL 228
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN-------IHKRLKE 319
+ N + N+ + L L L + NL F+ + ++E
Sbjct: 229 HKLTLRSNFDDLNVMKTCIQGLAGLEVHRLVLGEFRN-ERNLEEFDKSALEGLCNLTIEE 287
Query: 320 IRLS--NNYLELIESDTFYNLKELNTITL-SYNLLKSIKTTSFKNLNNMLNIV-LSFNQI 375
RL+ + YL+ I D F L ++ +L S N+ K ++ S+ L +V F Q
Sbjct: 288 FRLTYLDYYLDNI-IDLFNCLANASSFSLVSVNI-KRVEDFSYNFRWQHLELVNCKFEQ- 344
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+P + L +L +L NK N FS + L+LS N ++ ++
Sbjct: 345 ---FPT--LELESLKRLTFTANK----GGNAFSEVDLPSLEF-LDLSRNGLS--FKGCCS 392
Query: 436 QAPI---YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA-TAFGNLDVLE 491
Q+ +K LDLS N + + NFL + L L + +K + + F +L L
Sbjct: 393 QSDFGTTSLKYLDLSFNDVITMGSNFLGL--EQLEHLDFQHSNLKQMSQFSVFLSLRNLI 450
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK-LRILNISHNRLRS 550
L + H + V F G+ +L+++ ++ N + K L L++S +L
Sbjct: 451 YLDISHTHTTVAFNGIFDGLLSLKVLKMAGNSFQENFLPDIFTDLKNLTFLDLSQCQLEQ 510
Query: 551 LPRDVFSN-TIIEKLDISYN 569
L F ++ L++S+N
Sbjct: 511 LSPTAFDTLNKLQVLNMSHN 530
Score = 122 (48.0 bits), Expect = 0.00069, P = 0.00069
Identities = 65/308 (21%), Positives = 131/308 (42%)
Query: 254 EFPYYILNKNLN-TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
E +Y + N+ + + L + N ++++ +YS L ++L +I I + +
Sbjct: 42 ELNFYKIPDNIPFSTKNLDLSFNPLRHLGSYSFLRFPELQVLDLSRCEIQTIEDGAYQSL 101
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
H L + L+ N ++ + F L L + L S++ +L + + ++
Sbjct: 102 SH--LSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 159
Query: 373 NQIK-YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTP-MNLNLSNNYITNLY 430
N I+ + P F NL NL LDL NK+++ + P ++L+LS N I +
Sbjct: 160 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQNIYCKDLQVLHQMPLPNLSLDLSLNPINFIQ 219
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD-SLRKLYL-DFNEIKHLDATAFGNLD 488
K+ ++ +L SN V +Q A + +L L +F ++L+ L+
Sbjct: 220 PGAFKEIRLHKLTLR-SNFDDLNVMKTCIQGLAGLEVHRLVLGEFRNERNLEEFDKSALE 278
Query: 489 VLELLSLEHNNIAVV--VKRTFIGMPNLQIIDLSFNEISMLTG--EQFYFSFKLRILNIS 544
L L++E + + I + N SF+ +S+ E F ++F+ + L +
Sbjct: 279 GLCNLTIEEFRLTYLDYYLDNIIDLFNCLANASSFSLVSVNIKRVEDFSYNFRWQHLELV 338
Query: 545 HNRLRSLP 552
+ + P
Sbjct: 339 NCKFEQFP 346
Score = 90 (36.7 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ-GIFNS--KLRELEITGKDLKFI 59
LDLS N L L + + +LQ L + + ++ G + S L L +TG ++ +
Sbjct: 59 LDLSFNPLRHLGSYS-FLRFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 117
Query: 60 DPSAFDNIDACYDLTLKITN-TQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
AF + + L TN +E P G ++ +++ L+++HN + + +S
Sbjct: 118 ALGAFSGLSSLQKLVAVETNLASLENFPIG---HLKTLKE--LNVAHNLIQSFKLPEYFS 172
Query: 119 NVTKLQHL 126
N+T L+HL
Sbjct: 173 NLTNLEHL 180
Score = 76 (31.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLR----------ELEIT 52
L+++HN + + +SN+T L+HL L +++Q I+ L+ L+++
Sbjct: 155 LNVAHNLIQSFKLPEYFSNLTNLEHLD---LSSNKIQNIYCKDLQVLHQMPLPNLSLDLS 211
Query: 53 GKDLKFIDPSAFDNIDACYDLTLK 76
+ FI P AF I + LTL+
Sbjct: 212 LNPINFIQPGAFKEI-RLHKLTLR 234
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 225 (84.3 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 74/295 (25%), Positives = 134/295 (45%)
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
N+ + + +++ SL+ + + +I ++H + F I L+ + L N L + +
Sbjct: 163 NVTFLSDAKIFDNVSLHGLVISSGEIKRVHKSAF-LGIRGPLQALGLPGNALMSVPWNAL 221
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQ 395
L L + L+ N +K++ T F L +++ + LS NQI I FVNL L L L
Sbjct: 222 STLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLG 281
Query: 396 DNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVP 455
N+L D+ ++ S ++ + L+L N + ++SL+L+ N I+ +
Sbjct: 282 GNRLGDYAQSLRS-LSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQ 340
Query: 456 VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
L F+ L L L N+I L AF L L+ L L +N I + + + L
Sbjct: 341 NKALANFS-RLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLT 399
Query: 516 IIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
++DL+ N + LT + LR L ++ N + + R+ +E L + N
Sbjct: 400 VLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQEN 454
Score = 219 (82.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 72/279 (25%), Positives = 136/279 (48%)
Query: 283 YSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLK-EL 341
YS+ +L + N+ + +KI +N+ ++H + +S+ ++ + F ++ L
Sbjct: 152 YSI-SLLDCSLRNVTFLSDAKIFDNV---SLHGLV----ISSGEIKRVHKSAFLGIRGPL 203
Query: 342 NTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD 401
+ L N L S+ + L+ + + L+ N+IK + FV L +LV L+L +N++
Sbjct: 204 QALGLPGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISS 263
Query: 402 FNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP-IYIKSLDLSNNRIQEVPVNFLQ 460
+ F N+ + L L N + + ++ + + + ++ LDL N + P++ Q
Sbjct: 264 ISQRTFVNLRKLEV---LKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNG-PLSE-Q 318
Query: 461 TFAD--SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
T +L L L+ N IK + A N L LSL HN I V+ F G+ L +D
Sbjct: 319 TLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLD 378
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
LS+N I ++ +L +L+++HN LR+L D+ +
Sbjct: 379 LSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIA 417
Score = 170 (64.9 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 68/249 (27%), Positives = 115/249 (46%)
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
P+ L+ L+ LE L + NN IK + LTSL Y+ L N+IS I F N+ K
Sbjct: 217 PWNALS-TLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTF-VNLRK 274
Query: 316 RLKEIRLSNNYL-ELIES-DTFYNLKELNTITLSYNLLKS-IKTTSFKNLNNMLNIVLSF 372
L+ ++L N L + +S + L + L N L + + + N+ ++ L+
Sbjct: 275 -LEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNR 333
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N IK I A N LV L L+ N++ + F + + + L+LS N I + +
Sbjct: 334 NLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDS---LDLSYNGIVAI-SS 389
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
Q + LDL++N ++ + + + SLR+L L N+I + A LE
Sbjct: 390 ASLQHLSRLTVLDLTHNFLRALTSDLIAPLP-SLRELRLAGNDISIVARNAMDGARELES 448
Query: 493 LSLEHNNIA 501
L ++ N ++
Sbjct: 449 LQMQENPLS 457
Score = 170 (64.9 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 70/300 (23%), Positives = 137/300 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI L F L +L L LS N QI ++ F KL++L++ +
Sbjct: 235 NKIKALGTADFVGLTSLVYLELSNN--QISSISQRTFVNLRKLEVLKLGGNRLGDYAQSL 292
Query: 258 YILNKNLNTLEWLAMDNNNIKN-IRNYSLYNLTSLNYINLEYNKISKIHNN-LFHFNIHK 315
L++ L+ L L + NN+ + +L + +L +NL N I I N L +F+
Sbjct: 293 RSLSQCLS-LRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFS--- 348
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
RL + L +N +++++ F+ L L+++ LSYN + +I + S ++L+ + + L+ N +
Sbjct: 349 RLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFL 408
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS------NITSKQTPMNLNLSNNYITNL 429
+ + + LP+L +L L N + N ++ ++ P++ + S
Sbjct: 409 RALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFAEW 468
Query: 430 YENDKKQAPIYIKSLD---LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGN 486
+ + + + + L + +VPV L D++ K + N ++HL+ A N
Sbjct: 469 LQESQLHSSLSASCVTPPRLEGAPLLQVPVETLSCDMDNVEKD--NANIMQHLETLAKPN 526
Score = 153 (58.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 68/287 (23%), Positives = 129/287 (44%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTS-LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
+L L + + IK + + + L + L N + + N + L+ + L+N
Sbjct: 177 SLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNAL--STLSALERLDLAN 234
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N ++ + + F L L + LS N + SI +F NL + + L N++ Y +
Sbjct: 235 NKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGD-YAQSLR 293
Query: 385 NLP---NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
+L +L +LDLQ N L L+ + + +LNL+ N I ++ +N +
Sbjct: 294 SLSQCLSLRQLDLQANNLNG-PLSE-QTLPGMRNLESLNLNRNLIKSI-QNKALANFSRL 350
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
SL L +N+I +V + +L L L +N I + + + +L L +L L HN +
Sbjct: 351 VSLSLRHNQI-DVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLR 409
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
+ +P+L+ + L+ N+IS++ + +L L + N L
Sbjct: 410 ALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPL 456
Score = 150 (57.9 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 69/263 (26%), Positives = 116/263 (44%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L+ L + N + ++ +L L++L ++L NKI + F + L + LSNN
Sbjct: 203 LQALGLPGNALMSVPWNALSTLSALERLDLANNKIKALGTADF-VGLTS-LVYLELSNNQ 260
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNI-VLSFNQIKYIYPNAFVN 385
+ I TF NL++L + L N L S ++L+ L++ L P +
Sbjct: 261 ISSISQRTFVNLRKLEVLKLGGNRLGDY-AQSLRSLSQCLSLRQLDLQANNLNGPLSEQT 319
Query: 386 LP---NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
LP NL L+L N +K +N + ++L+L +N I L ++ +
Sbjct: 320 LPGMRNLESLNLNRNLIKSIQNKALANFSRL---VSLSLRHNQIDVLQDHAFFGLGA-LD 375
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
SLDLS N I + LQ + L L L N ++ L + L L L L N+I++
Sbjct: 376 SLDLSYNGIVAISSASLQHLS-RLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISI 434
Query: 503 VVKRTFIGMPNLQIIDLSFNEIS 525
V + G L+ + + N +S
Sbjct: 435 VARNAMDGARELESLQMQENPLS 457
>ZFIN|ZDB-GENE-060531-8 [details] [associations]
symbol:rxfp2l "relaxin/insulin-like family peptide
receptor 2, like" species:7955 "Danio rerio" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 ZFIN:ZDB-GENE-060531-8
GO:GO:0016021 GO:GO:0004930 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 HOVERGEN:HBG026354 GeneTree:ENSGT00650000093266
OrthoDB:EOG4NGGM1 EMBL:BX005476 EMBL:CU915756 IPI:IPI00897044
UniGene:Dr.141917 Ensembl:ENSDART00000143448 Uniprot:B0S5B5
Length = 622
Score = 223 (83.6 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 57/218 (26%), Positives = 112/218 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I L+ +LF +L+ L L N ++ I + F L+ L +S + +S +
Sbjct: 56 NRIESLSRDLFIRYRHLERLHLESNSIETI--SKRAFSGLVALRKLFLSQNKISSLKAGI 113
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ +L++LEWL +D N I ++R S L SL +++L N + + + RL
Sbjct: 114 F---SDLSSLEWLILDENRISSLRQKSFEGLKSLFFLSLLNNSVEQFPKTSICHEM-PRL 169
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + N + + + +F N L + L N + +I+ +F ++ ++++ +S NQIK
Sbjct: 170 NWLEMEGNIISSLWASSFKNCSSLTVLALRRNRISTIEEGTFADMQRLIDLDVSVNQIKD 229
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT 415
+ P+ F NL NL +L++ +N L + N F ++ + Q+
Sbjct: 230 LPPSLFQNLQNLKQLNISNNPLVNIYSNQFDSLVNLQS 267
Score = 214 (80.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 70/262 (26%), Positives = 127/262 (48%)
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
N N KN+ + + +++ + L N+I + +LF ++ L+ + L +N +E I
Sbjct: 32 NCNGKNLLHVPAVS-SNVTALELNSNRIESLSRDLFIR--YRHLERLHLESNSIETISKR 88
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
F L L + LS N + S+K F +L+++ ++L N+I + +F L +L L
Sbjct: 89 AFSGLVALRKLFLSQNKISSLKAGIFSDLSSLEWLILDENRISSLRQKSFEGLKSLFFLS 148
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ 452
L +N ++ F ++I + +N L + N I++L+ + K + L L NRI
Sbjct: 149 LLNNSVEQFPK---TSICHEMPRLNWLEMEGNIISSLWASSFKNCSS-LTVLALRRNRIS 204
Query: 453 EVPVNFLQTFADSLRKLYLDF--NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIG 510
+ TFAD R + LD N+IK L + F NL L+ L++ +N + + F
Sbjct: 205 TIEEG---TFADMQRLIDLDVSVNQIKDLPPSLFQNLQNLKQLNISNNPLVNIYSNQFDS 261
Query: 511 MPNLQIIDLSFNEISMLTGEQF 532
+ NLQ + + EI ++ F
Sbjct: 262 LVNLQSLSMEEVEIPNISIRMF 283
Score = 198 (74.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 66/262 (25%), Positives = 126/262 (48%)
Query: 155 NGNLFRHLQ--KSIVKAKKNNNNNEDQVS-DREKXXXXXXXXXXRCNKITDLNGNLFRHL 211
NG H+ S V A + N+N + +S D N I ++ F L
Sbjct: 34 NGKNLLHVPAVSSNVTALELNSNRIESLSRDLFIRYRHLERLHLESNSIETISKRAFSGL 93
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
L++L LS NK+ L + +F L+ L + + +S + + L +L +L+
Sbjct: 94 VALRKLFLSQNKIS--SLKAGIFSDLSSLEWLILDENRISSLRQKSF---EGLKSLFFLS 148
Query: 272 MDNNNIKNIRNYSL-YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+ NN+++ S+ + + LN++ +E N IS + + F N L + L N + I
Sbjct: 149 LLNNSVEQFPKTSICHEMPRLNWLEMEGNIISSLWASSFK-NCSS-LTVLALRRNRISTI 206
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
E TF +++ L + +S N +K + + F+NL N+ + +S N + IY N F +L NL
Sbjct: 207 EEGTFADMQRLIDLDVSVNQIKDLPPSLFQNLQNLKQLNISNNPLVNIYSNQFDSLVNLQ 266
Query: 391 KLDLQDNKLKDFNLNVFSNITS 412
L +++ ++ + ++ +F +T+
Sbjct: 267 SLSMEEVEIPNISIRMFRPLTN 288
Score = 189 (71.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 61/220 (27%), Positives = 104/220 (47%)
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
+ + L+ N ++S+ F ++ + L N I+ I AF L L KL L NK+
Sbjct: 48 VTALELNSNRIESLSRDLFIRYRHLERLHLESNSIETISKRAFSGLVALRKLFLSQNKIS 107
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQ 460
+FS+++S + L L N I++L + + L L NN +++ P +
Sbjct: 108 SLKAGIFSDLSSLEW---LILDENRISSLRQKSFEGLKSLF-FLSLLNNSVEQFPKTSIC 163
Query: 461 TFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLS 520
L L ++ N I L A++F N L +L+L N I+ + + TF M L +D+S
Sbjct: 164 HEMPRLNWLEMEGNIISSLWASSFKNCSSLTVLALRRNRISTIEEGTFADMQRLIDLDVS 223
Query: 521 FNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI 560
N+I L F L+ LNIS+N L ++ + F + +
Sbjct: 224 VNQIKDLPPSLFQNLQNLKQLNISNNPLVNIYSNQFDSLV 263
Score = 181 (68.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 62/257 (24%), Positives = 122/257 (47%)
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
++ N+ LE +++N I+++ L ++LE N I I F + L++
Sbjct: 44 VSSNVTALE---LNSNRIESLSRDLFIRYRHLERLHLESNSIETISKRAFSGLV--ALRK 98
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ LS N + +++ F +L L + L N + S++ SF+ L ++ + L N ++ +
Sbjct: 99 LFLSQNKISSLKAGIFSDLSSLEWLILDENRISSLRQKSFEGLKSLFFLSLLNNSVEQ-F 157
Query: 380 PNAFV--NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
P + +P L L+++ N + + F N +S L L N I+ + E
Sbjct: 158 PKTSICHEMPRLNWLEMEGNIISSLWASSFKNCSSLTV---LALRRNRISTIEEGTFADM 214
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
I LD+S N+I+++P + Q +L++L + N + ++ + F +L L+ LS+E
Sbjct: 215 QRLI-DLDVSVNQIKDLPPSLFQNL-QNLKQLNISNNPLVNIYSNQFDSLVNLQSLSMEE 272
Query: 498 NNIAVVVKRTFIGMPNL 514
I + R F + NL
Sbjct: 273 VEIPNISIRMFRPLTNL 289
Score = 180 (68.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 71/266 (26%), Positives = 124/266 (46%)
Query: 149 NKITDLNGNLF---RHLQKSIVKAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKITDLN 204
N+I L+ +LF RHL++ +++ N+ + +S R NKI+ L
Sbjct: 56 NRIESLSRDLFIRYRHLERLHLES-----NSIETISKRAFSGLVALRKLFLSQNKISSLK 110
Query: 205 GNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN--EFPYYILNK 262
+F L +L+ L L N++ + S FE L+ L SL N++ +FP +
Sbjct: 111 AGIFSDLSSLEWLILDENRISSLRQKS-----FEGLKSL-FFLSLLNNSVEQFPKTSICH 164
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+ L WL M+ N I ++ S N +SL + L N+IS I F +RL ++ +
Sbjct: 165 EMPRLNWLEMEGNIISSLWASSFKNCSSLTVLALRRNRISTIEEGTFADM--QRLIDLDV 222
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S N ++ + F NL+ L + +S N L +I + F +L N+ ++ + +I I
Sbjct: 223 SVNQIKDLPPSLFQNLQNLKQLNISNNPLVNIYSNQFDSLVNLQSLSMEEVEIPNISIRM 282
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFS 408
F L NL + + + ++ NV S
Sbjct: 283 FRPLTNLTHIYFKRFEFCGYSPNVRS 308
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 56/212 (26%), Positives = 103/212 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I+ L F L +L LSL N ++ S ++ +L LE+ ++ +S
Sbjct: 128 NRISSLRQKSFEGLKSLFFLSLLNNSVEQFPKTSICHEM-PRLNWLEMEGNIISSLWASS 186
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ KN ++L LA+ N I I + ++ L +++ N+I + +LF N+ + L
Sbjct: 187 F---KNCSSLTVLALRRNRISTIEEGTFADMQRLIDLDVSVNQIKDLPPSLFQ-NL-QNL 241
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
K++ +SNN L I S+ F +L L ++++ + +I F+ L N+ +I F + ++
Sbjct: 242 KQLNISNNPLVNIYSNQFDSLVNLQSLSMEEVEIPNISIRMFRPLTNLTHIY--FKRFEF 299
Query: 378 I-Y-PNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
Y PN PN + +N L + L VF
Sbjct: 300 CGYSPNVRSCKPNTDGISSFENLLANIILRVF 331
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 152 (58.6 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 274 NNNIKNIRNYSLYNLTS-----LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + + + I LE N I I F +K+LK I +S N +
Sbjct: 101 SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF--TQYKKLKRIDISKNQIS 158
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I D F LK L ++ L N + I F L ++ ++L+ N+I + N F +L +
Sbjct: 159 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQS 218
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L L L DNKL+ + +F+ + + QT L+L+ N
Sbjct: 219 LSLLSLYDNKLQTISKGLFAPLQAIQT---LHLAQN 251
Score = 134 (52.2 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 48/185 (25%), Positives = 83/185 (44%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L +++N I + ++ L +L INL N+I ++ F + ++E+ L+ N LE
Sbjct: 351 LRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAF--DGAASVQELVLTGNQLE 408
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
F L L T+ L NL+ + +F L+++ + L N+I I P AF L +
Sbjct: 409 TAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 468
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L ++L N FN N K L I + N + Q P ++K + + +
Sbjct: 469 LSTINLLSNP---FNCNCHLAWLGKW------LRKRRIVS--GNPRCQKPFFLKEIPIQD 517
Query: 449 NRIQE 453
IQ+
Sbjct: 518 VAIQD 522
Score = 129 (50.5 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 40/130 (30%), Positives = 68/130 (52%)
Query: 418 NLNLSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEI 476
+L L++N I+ L K+ P ++ ++LSNNRI+EV A S+++L L N++
Sbjct: 350 DLRLNDNEISVLEATGIFKKLP-NLRKINLSNNRIKEVKEGAFDGAA-SVQELVLTGNQL 407
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF 536
+ AF L L+ L L N I+ V TF G+ +++++ L N I+ +T F
Sbjct: 408 ETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLV 467
Query: 537 KLRILNISHN 546
L +N+ N
Sbjct: 468 SLSTINLLSN 477
Score = 124 (48.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 38/123 (30%), Positives = 63/123 (51%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
LE N ++ + L F H L I LSNN + ++ + TF N+ L+T+ LSYN L+ I
Sbjct: 573 LEGNHLTAVPKELSSFR-HLTL--IDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIP 629
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT 415
SF L ++ + L N I + +F +L +L L L + ++N ++ ++ T
Sbjct: 630 VHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLLLHTFPM-NYNSSI-CQLSRYIT 687
Query: 416 PMN 418
P N
Sbjct: 688 PFN 690
Score = 118 (46.6 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 35/124 (28%), Positives = 60/124 (48%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y+ L L++N I + + +LRK+ L N IK + AF G V EL+ L
Sbjct: 345 PEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELV-LT 403
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + R F G+ L+ + L N IS ++ + F +R+L++ NR+ ++ F
Sbjct: 404 GNQLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 463
Query: 557 SNTI 560
+ +
Sbjct: 464 TTLV 467
Score = 110 (43.8 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 34/125 (27%), Positives = 62/125 (49%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I K + E+ L N+L + + + + L I LS N + + +F N++++ ++LS+
Sbjct: 564 IPKDVTELYLEGNHLTAVPKE-LSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSY 622
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT------PMNLNLS---- 422
N+++ I ++F L +L L L N + F+++TS PMN N S
Sbjct: 623 NRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLLLHTFPMNYNSSICQL 682
Query: 423 NNYIT 427
+ YIT
Sbjct: 683 SRYIT 687
Score = 99 (39.9 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K L L + + NN IK ++ + S+ + L N++ H F + LK +
Sbjct: 368 KKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFR-GL-SGLKTLM 425
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L +N + + +DTF L + ++L N + +I +F L ++ I L N
Sbjct: 426 LRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 477
Score = 98 (39.6 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 468 KLYLDFNEIKHLDATA--FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
+LYL+ N HL A + L L+ L +N+I ++ TF M +L + LS+N +
Sbjct: 570 ELYLEGN---HLTAVPKELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLR 626
Query: 526 MLTGEQFYFSFKLRILNISHNRLRSLPRDVF------SNTIIEKLDISYNQDKIRPGRES 579
+ F LR+L + N + S+P F S+ ++ ++YN + R
Sbjct: 627 CIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLLLHTFPMNYNSSICQLSRYI 686
Query: 580 NP 581
P
Sbjct: 687 TP 688
Score = 93 (37.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 31/128 (24%), Positives = 59/128 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
+ ++ N+IK+I + L I++ N+IS I + F + K L + L N +
Sbjct: 126 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQ-GL-KSLTSLVLYGNKITE 183
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
I F L L + L+ N + ++ +F++L ++ + L N+++ I F L +
Sbjct: 184 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAI 243
Query: 390 VKLDLQDN 397
L L N
Sbjct: 244 QTLHLAQN 251
Score = 88 (36.0 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KL+ ++I+ + I P AF + + L L +I E+P GLFD + ++ Q+ L L+
Sbjct: 146 KLKRIDISKNQISDIAPDAFQGLKSLTSLVLY--GNKITEIPKGLFDGLVSL-QLLL-LN 201
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
NK++ L + T LQ L L D +
Sbjct: 202 ANKINCLRVNTFQD----LQSLSLLSLYDNK 228
Score = 83 (34.3 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 30/113 (26%), Positives = 59/113 (52%)
Query: 198 NKITDLNGN-LFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N+I+ L +F+ L NL++++LS N+++ E+ FD +Q L ++ N E
Sbjct: 356 NEISVLEATGIFKKLPNLRKINLSNNRIK--EVKEGAFDGAASVQELVLTG---NQLETA 410
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
+ + L+ L+ L + +N I + N + L+S+ ++L N+I+ I F
Sbjct: 411 HGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAF 463
Score = 79 (32.9 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 26/97 (26%), Positives = 50/97 (51%)
Query: 419 LNLSNNYITNLYENDKKQAPI-YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
L L N++T + K+ + ++ +DLSNN I + N+ + L L L +N ++
Sbjct: 571 LYLEGNHLTAV---PKELSSFRHLTLIDLSNNSIGML-TNYTFSNMSHLSTLILSYNRLR 626
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNL 514
+ +F L L +L+L N+I+ V + +F + +L
Sbjct: 627 CIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSL 663
Score = 77 (32.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN--EF 255
N I + F L+ + +S N QI ++ D F+ L+ L S L+ + E
Sbjct: 131 NSIKSIPAGAFTQYKKLKRIDISKN--QISDIAP---DAFQGLKSLT-SLVLYGNKITEI 184
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF 309
P + + L +L+ L ++ N I +R + +L SL+ ++L NK+ I LF
Sbjct: 185 PKGLFD-GLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLF 237
Score = 74 (31.1 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N I + F +K + + + N D D + NKIT++ LF
Sbjct: 131 NSIKSIPAGAFTQYKK-LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLF 189
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
L +LQ L L+ NK+ + +N+ F + L LL +
Sbjct: 190 DGLVSLQLLLLNANKINCLRVNT--FQDLQSLSLLSL 224
Score = 72 (30.4 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL-NLSNNYITNLYENDKKQAPIYIKSL 444
LP + D+ + L+ +L S + L +LSNN I + N ++ +L
Sbjct: 560 LPKGIPKDVTELYLEGNHLTAVPKELSSFRHLTLIDLSNNSI-GMLTNYTFSNMSHLSTL 618
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
LS NR++ +PV+ SLR L L N+I + +F +L L L L
Sbjct: 619 ILSYNRLRCIPVHSFNGLR-SLRVLTLHGNDISSVPEGSFNDLTSLSHLLL 668
Score = 70 (29.7 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 28/102 (27%), Positives = 44/102 (43%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N+I+D+ + F+ L KS+ N + NKI L N F
Sbjct: 155 NQISDIAPDAFQGL-KSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTF 213
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
+ L +L LSL NKLQ I + +F + +Q L ++ + F
Sbjct: 214 QDLQSLSLLSLYDNKLQTI--SKGLFAPLQAIQTLHLAQNPF 253
Score = 56 (24.8 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS--NVTKLQHLG---TT 129
+++ I+ +P+G F + + +++ +D+S N++S + ++T L G T
Sbjct: 126 IRLEQNSIKSIPAGAFTQYKKLKR--IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 183
Query: 130 ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
I K NKI L N F+ LQ
Sbjct: 184 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 217
Score = 52 (23.4 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 24/119 (20%), Positives = 49/119 (41%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNI 67
N +S + T +N+ + G T + + +GI +L + +K I AF
Sbjct: 90 NSISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQ-----NSIKSIPAGAFTQY 144
Query: 68 DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ I+ QI ++ F ++++ + L NK++ + L+ + LQ L
Sbjct: 145 KKLK--RIDISKNQISDIAPDAFQGLKSLTSLVL--YGNKITEIPKG-LFDGLVSLQLL 198
Score = 51 (23.0 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 23/110 (20%), Positives = 55/110 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+D+S N++S + L+ L + +L G+++ +G+F+ L+ L + +
Sbjct: 150 IDISKNQISDIAPDAFQG----LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKI 205
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
+ + F ++ + L+L + +++ + GLF ++ I+ TL L+ N
Sbjct: 206 NCLRVNTFQDLQSLSLLSLY--DNKLQTISKGLFAPLQAIQ--TLHLAQN 251
Score = 45 (20.9 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
R N I+ ++ + F L +++ LSL N++ I F L + + + FN N
Sbjct: 427 RSNLISCVSNDTFAGLSSVRLLSLYDNRITTI--TPGAFTTLVSLSTINLLSNPFNCN 482
>UNIPROTKB|F1PVE1 [details] [associations]
symbol:PHLPP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001849 InterPro:IPR001932
Pfam:PF00481 PROSITE:PS50003 PROSITE:PS51450 SMART:SM00233
SMART:SM00332 GO:GO:0003824 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008152 Gene3D:3.60.40.10 SUPFAM:SSF81606
GeneTree:ENSGT00440000037833 OMA:CCELSAG EMBL:AAEX03000087
EMBL:AAEX03000088 Ensembl:ENSCAFT00000000123 Uniprot:F1PVE1
Length = 1388
Score = 227 (85.0 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 101/407 (24%), Positives = 192/407 (47%)
Query: 197 CNKITDLNGNLF-----RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFN 251
C + L NLF HL NL++ L N N F KL+ L +S + +
Sbjct: 338 CCSLEHLPANLFYSQDLTHL-NLKQNFLRQNPCLPTARGLNELQRFTKLKSLNLSNN--H 394
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
EFP + N + TL L + N ++ + ++ + +L L+ N + + L
Sbjct: 395 LGEFPLAVCN--IPTLTELNVSCNALRAVPA-AVGVMHNLQTFLLDGNFLQALPPELE-- 449
Query: 312 NIHKRLKEIRLS-NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
N+H+ L + LS N + ++ E L ++ + +S N +++++ + + + ++ ++ L
Sbjct: 450 NMHQ-LSYLGLSFNEFTDIPE--ILEKLTAVDKLCMSGNCMETLRLEALRKMPHIKHVDL 506
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN----LNLSNNYI 426
N I+ + + L ++ +LDL+DNKL D + +F+NI N LN+ ++
Sbjct: 507 RLNVIRKLIADEVDFLQHVTQLDLRDNKLGDLDAMIFNNIEVLHCERNQLVTLNICGYFL 566
Query: 427 TNLY--ENDKKQ-----APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
LY N+ Q P Y+ +D+S N ++ VP ++ L L + N+I L
Sbjct: 567 KALYAASNELVQLDVYPVPNYLSYMDVSRNCLENVPEWVCES--RKLEVLDIGHNQICEL 624
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
A F + + +LL+ HN + + +R + +++++D+ N++ L + LR
Sbjct: 625 PARLFCHSSLRKLLA-GHNQLTRLPER--LERTSVEVLDVQHNQLLELPPNLLMKADSLR 681
Query: 540 ILNISHNRLRSLPRDVFS---NTIIEKLDISYNQ--DKIRPGRESNP 581
LN S N+L +LP S N+I+++L ++ N DK P +P
Sbjct: 682 FLNASANKLETLPPATLSEETNSILQELYLTNNNLTDKCVPLLTGHP 728
Score = 202 (76.2 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 89/365 (24%), Positives = 176/365 (48%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
++NLQ L N LQ + + +L L +SF+ F + P IL K L ++ L
Sbjct: 428 MHNLQTFLLDGNFLQALPPE---LENMHQLSYLGLSFNEFT--DIPE-ILEK-LTAVDKL 480
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
M N ++ +R +L + + +++L N I K+ + F H + ++ L +N L +
Sbjct: 481 CMSGNCMETLRLEALRKMPHIKHVDLRLNVIRKLIADEVDFLQH--VTQLDLRDNKLGDL 538
Query: 331 ESDTFYNLKELN-------TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY--IYPN 381
++ F N++ L+ T+ + LK++ S N L++ N + Y + N
Sbjct: 539 DAMIFNNIEVLHCERNQLVTLNICGYFLKALYAAS--NELVQLDVYPVPNYLSYMDVSRN 596
Query: 382 AFVNLPNLV----KLDLQD---NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
N+P V KL++ D N++ + +F + + ++ L +N +T L E +
Sbjct: 597 CLENVPEWVCESRKLEVLDIGHNQICELPARLFCHSSLRK----LLAGHNQLTRLPERLE 652
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD-ATAFGNLD-VLEL 492
+ + ++ LD+ +N++ E+P N L ADSLR L N+++ L AT + +L+
Sbjct: 653 RTS---VEVLDVQHNQLLELPPNLLMK-ADSLRFLNASANKLETLPPATLSEETNSILQE 708
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L L +NN+ G P+L+I+ +++N + + +L ++IS N+L+++P
Sbjct: 709 LYLTNNNLTDKCVPLLTGHPHLKILHMAYNRLQSFPASKMAKLEELEEIDISGNKLKAIP 768
Query: 553 RDVFS 557
+ +
Sbjct: 769 TTIMN 773
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 158 (60.7 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 49/156 (31%), Positives = 78/156 (50%)
Query: 274 NNNIKNIRNYSLYNLTS-----LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+NNI + R L + + + I LE N I I F +K+LK I +S N +
Sbjct: 101 SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF--TQYKKLKRIDISKNQIS 158
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I +D F LK L ++ L N + I F L ++ ++L+ N+I + N F +L N
Sbjct: 159 DIAADAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 218
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
L L L DNKL+ + +F+ + + QT L+L+ N
Sbjct: 219 LNLLSLYDNKLQTISKGLFAPLQAIQT---LHLAQN 251
Score = 154 (59.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 88/367 (23%), Positives = 165/367 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN--EF 255
N I + F L+ + +S N QI ++ + D F+ L+ L S L+ + E
Sbjct: 131 NSIKSIPAGAFTQYKKLKRIDISKN--QISDIAA---DAFQGLKSLT-SLVLYGNKITEI 184
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF------ 309
P + + L +L+ L ++ N I +R + +L +LN ++L NK+ I LF
Sbjct: 185 PKGLFD-GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAI 243
Query: 310 ---HFNIHKRLKEIRLS--NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNN 364
H + + + L +YL+ +T + + L+ + IK+ F+ N
Sbjct: 244 QTLHLAQNPFVCDCHLKWLADYLQDNPIETS-GARCSSPRRLANKRISQIKSKKFRCSGN 302
Query: 365 M----LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
+++++ ++ P+ +V D + KL V S++ T + LN
Sbjct: 303 QDSQYRHLLVADVGSDFLCPDKCRCEGTIV--DCSNQKLA----RVPSHLPEYVTDLRLN 356
Query: 421 LSNNYITNLYENDK-KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
+N I+ L K+ P ++ ++LSNN+I+EV A S+++L L N+++ +
Sbjct: 357 --DNEISVLEATGVFKKLP-NLRKINLSNNKIKEVREGAFDGAA-SVQELMLTGNQLETV 412
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
F L L+ L L N I+ V TF+G+ +++++ L N IS +T F L
Sbjct: 413 HGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLS 472
Query: 540 ILNISHN 546
+N+ N
Sbjct: 473 TINLLSN 479
Score = 142 (55.0 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 49/185 (26%), Positives = 84/185 (45%)
Query: 270 LAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L +++N I + ++ L +L INL NKI ++ F + ++E+ L+ N LE
Sbjct: 353 LRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAF--DGAASVQELMLTGNQLE 410
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+ F L L T+ L NL+ + +F L+++ + L N+I I P AF L +
Sbjct: 411 TVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVS 470
Query: 389 LVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
L ++L N FN N K L I + N + Q P ++K + + +
Sbjct: 471 LSTINLLSNP---FNCNCHLAWLGKW------LRKRRIVS--GNPRCQKPFFLKEIPIQD 519
Query: 449 NRIQE 453
IQ+
Sbjct: 520 VAIQD 524
Score = 127 (49.8 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 35/104 (33%), Positives = 55/104 (52%)
Query: 296 LEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK 355
LE N ++ + L +I + L I LSNN + ++ + TF N+ L+T+ LSYN L+ I
Sbjct: 576 LEGNHLTAVPREL---SIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIP 632
Query: 356 TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
SF L ++ + L N I + +F +L +L L L N L
Sbjct: 633 IHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 676
Score = 122 (48.0 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 36/124 (29%), Positives = 62/124 (50%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P Y+ L L++N I + + +LRK+ L N+IK + AF G V EL+ L
Sbjct: 347 PEYVTDLRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELM-LT 405
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + V R F G+ L+ + L N IS ++ + F +R+L++ NR+ ++ F
Sbjct: 406 GNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAF 465
Query: 557 SNTI 560
+ +
Sbjct: 466 TTLV 469
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 26/100 (26%), Positives = 52/100 (52%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I K + E+ L N+L + + + L I LS N + + +F N++++ ++LS+
Sbjct: 567 IPKDVTELYLEGNHLTAVPRELSI-FRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSY 625
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
N+++ I ++F L +L L L N + F+++TS
Sbjct: 626 NRLRCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTS 665
Score = 97 (39.2 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
+ ++ N+IK+I + L I++ N+IS I + F + K L + L N +
Sbjct: 126 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQ-GL-KSLTSLVLYGNKITE 183
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
I F L L + L+ N + ++ +F++L N+ + L N+++ I F L +
Sbjct: 184 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAI 243
Query: 390 VKLDLQDN 397
L L N
Sbjct: 244 QTLHLAQN 251
Score = 96 (38.9 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 468 KLYLDFNEIKHLDATAFGNLDV---LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
+LYL+ N HL A L + L L+ L +N+I ++ TF M +L + LS+N +
Sbjct: 573 ELYLEGN---HLTAVP-RELSIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRL 628
Query: 525 SMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
+ F LR+L + N + S+P F++ T + L + N
Sbjct: 629 RCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 674
Score = 83 (34.3 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++ +DLSNN I + N+ + L L L +N ++ + +F L L +L+L N+
Sbjct: 593 HLTLIDLSNNSIGML-TNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGND 651
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEI 524
I+ V + +F + +L + L N +
Sbjct: 652 ISSVPEGSFNDLTSLSHLALGTNPL 676
Score = 82 (33.9 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 45 KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLS 104
KL+ ++I+ + I AF + + L L +I E+P GLFD + ++ Q+ L L+
Sbjct: 146 KLKRIDISKNQISDIAADAFQGLKSLTSLVLY--GNKITEIPKGLFDGLVSL-QLLL-LN 201
Query: 105 HNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
NK++ L + T LQ+L L D +
Sbjct: 202 ANKINCLRVNTFQD----LQNLNLLSLYDNK 228
Score = 76 (31.8 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N I + F +K + + + N D +D + NKIT++ LF
Sbjct: 131 NSIKSIPAGAFTQYKK-LKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIPKGLF 189
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
L +LQ L L+ NK+ + +N+ F + L LL +
Sbjct: 190 DGLVSLQLLLLNANKINCLRVNT--FQDLQNLNLLSL 224
Score = 57 (25.1 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS--NVTKLQHLG---TT 129
+++ I+ +P+G F + + +++ +D+S N++S + ++T L G T
Sbjct: 126 IRLEQNSIKSIPAGAFTQYKKLKR--IDISKNQISDIAADAFQGLKSLTSLVLYGNKITE 183
Query: 130 ILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
I K NKI L N F+ LQ
Sbjct: 184 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQ 217
Score = 54 (24.1 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 24/119 (20%), Positives = 50/119 (42%)
Query: 8 NKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNI 67
N +S + T +N+ + G T + + +GI +L + +K I AF
Sbjct: 90 NSISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQ-----NSIKSIPAGAFTQY 144
Query: 68 DACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL 126
+ I+ QI ++ + F ++++ + L NK++ + L+ + LQ L
Sbjct: 145 KKLK--RIDISKNQISDIAADAFQGLKSLTSLVL--YGNKITEIPKG-LFDGLVSLQLL 198
Score = 53 (23.7 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 24/110 (21%), Positives = 56/110 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
+D+S N++S + A + + L L +L G+++ +G+F+ L+ L + +
Sbjct: 150 IDISKNQISDI-AADAFQGLKSLTSL---VLYGNKITEIPKGLFDGLVSLQLLLLNANKI 205
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHN 106
+ + F ++ +L L + + +++ + GLF ++ I+ TL L+ N
Sbjct: 206 NCLRVNTFQDLQNL-NL-LSLYDNKLQTISKGLFAPLQAIQ--TLHLAQN 251
Score = 44 (20.5 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
R N I+ ++ + F L +++ LSL N++ I F L + + + FN N
Sbjct: 429 RSNLISCVSNDTFVGLSSVRLLSLYDNRISTI--TPGAFTTLVSLSTINLLSNPFNCN 484
>UNIPROTKB|F1NJB8 [details] [associations]
symbol:PHLPP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0009649
"entrainment of circadian clock" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001849 InterPro:IPR001932
Pfam:PF00481 PROSITE:PS50003 PROSITE:PS51450 SMART:SM00233
SMART:SM00332 GO:GO:0003824 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0009649 GO:GO:0008152 Gene3D:3.60.40.10
SUPFAM:SSF81606 GeneTree:ENSGT00440000037833 OMA:CCELSAG
EMBL:AADN02036501 IPI:IPI00583561 Ensembl:ENSGALT00000037175
ArrayExpress:F1NJB8 Uniprot:F1NJB8
Length = 1181
Score = 226 (84.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 99/407 (24%), Positives = 186/407 (45%)
Query: 197 CNKITDLNGNLFRHLYNLQELSL--SFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN- 253
C + L NLF + +L L+L +F KL S ++ L+ S +L N+N
Sbjct: 122 CCSLEHLPANLF-YSQDLTHLNLKQNFLKLNPSPSASRALSELQRFTKLK-SLNLSNNNL 179
Query: 254 -EFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
+FP + + + TL L + N ++N+ + + +L L+ N + + + L H
Sbjct: 180 GDFPLAVCS--IPTLTELNVSCNALRNVPAV-VGEMHNLQTFLLDGNFLQSLPDELEH-- 234
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+H+ L + LS N I L ++ + +S N + ++ K + ++ ++ L
Sbjct: 235 MHQ-LSYVSLSFNEFTDIPG-VLEKLTAMDKLCMSGNCVDTLNLQVLKRMPHIKHVDLRL 292
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN----LNLSNNYITN 428
N I+ + + L ++ +LDL+DNKL + + +F+N+ N L +S ++
Sbjct: 293 NSIRRLEADEIDFLHHVTQLDLRDNKLGELDATIFNNVEVLHCERNQLVTLKISGYFLKA 352
Query: 429 LYEN-------DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--NEIKHL 479
LY + D P Y+ +D+S N ++ +P + DS + LD N I L
Sbjct: 353 LYASSNELVHLDVYPVPNYLTYMDISRNHLENLP----EWVCDSKKLEVLDVGHNRISEL 408
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
A F N + +LL+ HN + + R + ++++D+ N++ L + LR
Sbjct: 409 PARLFYNSSLRKLLA-GHNLLGRLPDR--LERTQVEVLDVQHNQLLELPPNLLLKADSLR 465
Query: 540 ILNISHNRLRSLPRDVFS---NTIIEKLDISYNQ--DKIRPGRESNP 581
LN S N+L LP S ++I+++L ++ N DK P +P
Sbjct: 466 FLNASANKLEMLPPATLSEETHSILQELYLTNNNLTDKCVPLLTGHP 512
Score = 204 (76.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 87/379 (22%), Positives = 177/379 (46%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
CN + ++ + ++NLQ L N LQ + + + +L + +SF+ F + P
Sbjct: 199 CNALRNVPA-VVGEMHNLQTFLLDGNFLQSLP---DELEHMHQLSYVSLSFNEFT--DIP 252
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+L K L ++ L M N + + L + + +++L N I ++ + F +H
Sbjct: 253 G-VLEK-LTAMDKLCMSGNCVDTLNLQVLKRMPHIKHVDLRLNSIRRLEADEIDF-LH-H 308
Query: 317 LKEIRLSNNYLELIESDTFYNLKELN-------TITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ ++ L +N L +++ F N++ L+ T+ +S LK++ +S + ++ L++
Sbjct: 309 VTQLDLRDNKLGELDATIFNNVEVLHCERNQLVTLKISGYFLKALYASSNELVH--LDVY 366
Query: 370 LSFNQIKY--IYPNAFVNLPNLV----KLDLQD---NKLKDFNLNVFSNITSKQTPMNLN 420
N + Y I N NLP V KL++ D N++ + +F N + ++ N
Sbjct: 367 PVPNYLTYMDISRNHLENLPEWVCDSKKLEVLDVGHNRISELPARLFYNSSLRKLLAGHN 426
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
L L ++ Q + LD+ +N++ E+P N L ADSLR L N+++ L
Sbjct: 427 LLGRLPDRL---ERTQVEV----LDVQHNQLLELPPNLLLK-ADSLRFLNASANKLEMLP 478
Query: 481 ATAFGNL--DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+L+ L L +NN+ G P+L+I+ +++N + + +L
Sbjct: 479 PATLSEETHSILQELYLTNNNLTDKCVPLLTGHPHLKILHMAYNRLQSFPASKMAKLEEL 538
Query: 539 RILNISHNRLRSLPRDVFS 557
++IS N+L+++P + +
Sbjct: 539 EEIDISGNKLKAIPTTIMN 557
Score = 144 (55.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 78/343 (22%), Positives = 154/343 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVF-------DVFEKLQLLEISFSLF 250
N + LN + + + +++ + L N ++ +E + F D+ + +L E+ ++F
Sbjct: 269 NCVDTLNLQVLKRMPHIKHVDLRLNSIRRLEADEIDFLHHVTQLDLRDN-KLGELDATIF 327
Query: 251 NSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYS--LYNLTSLNYIN-LEYNKISKIH-N 306
N+ E +L+ N L L + +K + S L +L N L Y IS+ H
Sbjct: 328 NNVE----VLHCERNQLVTLKISGYFLKALYASSNELVHLDVYPVPNYLTYMDISRNHLE 383
Query: 307 NLFHFNIH-KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM 365
NL + K+L+ + + +N + + + FYN L + +NLL + + +
Sbjct: 384 NLPEWVCDSKKLEVLDVGHNRISELPARLFYN-SSLRKLLAGHNLLGRLPDRLERTQVEV 442
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
L++ NQ+ + PN + +L L+ NKL+ S T L L+NN
Sbjct: 443 LDV--QHNQLLELPPNLLLKADSLRFLNASANKLEMLPPATLSEETHSIL-QELYLTNNN 499
Query: 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFG 485
+T+ P ++K L ++ NR+Q P + + + L ++ + N++K + T
Sbjct: 500 LTDKCVPLLTGHP-HLKILHMAYNRLQSFPASKMAKL-EELEEIDISGNKLKAIPTTIM- 556
Query: 486 NLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLT 528
N + + + H+N V + + ++ +DLS NE+S +T
Sbjct: 557 NCRRMHTV-IAHSNCIEVFPEV-MQLSEIKCVDLSCNELSEIT 597
Score = 124 (48.7 bits), Expect = 0.00064, P = 0.00064
Identities = 84/347 (24%), Positives = 151/347 (43%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPS 62
LDL NKL L+ AT+++NV L H L ++ G F L+ L + +L +D
Sbjct: 312 LDLRDNKLGELD-ATIFNNVEVL-HCERNQLVTLKISGYF---LKALYASSNELVHLDVY 366
Query: 63 AFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLY-SNVT 121
N Y + I+ +E LP + D + +E LD+ HN++S L Y S++
Sbjct: 367 PVPN----YLTYMDISRNHLENLPEWVCDS-KKLE--VLDVGHNRISELPARLFYNSSLR 419
Query: 122 KLQ--HLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQK-SIVKAKKNNNNNED 178
KL H L DR + N++ +L NL + A N
Sbjct: 420 KLLAGHNLLGRLPDRLERTQVEVLDVQH-NQLLELPPNLLLKADSLRFLNASANKLEMLP 478
Query: 179 QVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFE 238
+ E+ N +TD L +L+ L +++N+LQ ++ E
Sbjct: 479 PATLSEETHSILQELYLTNNNLTDKCVPLLTGHPHLKILHMAYNRLQ--SFPASKMAKLE 536
Query: 239 KLQLLEISFSLFNSNEFPYYILN-KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLE 297
+L+ ++IS + + P I+N + ++T+ +A +N I+ + L+ + ++L
Sbjct: 537 ELEEIDISGNKLKA--IPTTIMNCRRMHTV--IA-HSNCIEVFPE--VMQLSEIKCVDLS 589
Query: 298 YNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTI 344
N++S+I N+ +L+E+ L+ N ++ T L+ LN I
Sbjct: 590 CNELSEI---TLPENLPPKLQELDLTGNPRLALDHKT---LELLNNI 630
>UNIPROTKB|D8MCT0 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G
protein-coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 EMBL:AC078860 EMBL:AC090116 HGNC:HGNC:4504
EMBL:FN820440 IPI:IPI00970955 SMR:D8MCT0 Ensembl:ENST00000536515
UCSC:uc021rar.1 Uniprot:D8MCT0
Length = 835
Score = 224 (83.9 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 78/270 (28%), Positives = 134/270 (49%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L +L+ L + NN ++++ +L NL SL ++L N+I + F +H L+ + L+
Sbjct: 113 LYSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIHSLGKKCFD-GLHS-LETLDLN 170
Query: 324 NNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
N L+ + T NLKEL N ++SI +F +++ I N I+++ +
Sbjct: 171 YNNLDEFPTAIRTLSNLKELG---FHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRS 227
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
AF +LP L L L + F ++T +L L+ I++L + Q P +
Sbjct: 228 AFQHLPELRTLTLNGAS----QITEFPDLTGTANLESLTLTGAQISSLPQTVCNQLP-NL 282
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+ LDLS N ++++P +F + L+K+ L NEI + F L L L+L N IA
Sbjct: 283 QVLDLSYNLLEDLP-SF--SVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIA 339
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISM--LTG 529
++ F +P+L +DLS N +S +TG
Sbjct: 340 IIHPNAFSTLPSLIKLDLSSNLLSSFPITG 369
Score = 212 (79.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 74/290 (25%), Positives = 136/290 (46%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+L LE L + N + I + L SL + L+ N++ + N+ + L+ + L
Sbjct: 88 SLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQ-NL-RSLQSLHL 145
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
NN + + F L L T+ L+YN L T + + L+N+ + N I+ I A
Sbjct: 146 HNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNIRSIPEKA 204
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
FV P+L+ + DN ++ + F ++ +T + LN ++ IT E ++
Sbjct: 205 FVGNPSLITIHFYDNPIQFVGRSAFQHLPELRT-LTLNGASQ-IT---EFPDLTGTANLE 259
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
SL L+ +I +P + L+ L L +N ++ D +F L+ + L HN I
Sbjct: 260 SLTLTGAQISSLPQTVCNQLPN-LQVLDLSYNLLE--DLPSFSVCQKLQKIDLRHNEIYE 316
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
+ TF + +L+ ++L++N+I+++ F L L++S N L S P
Sbjct: 317 IKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFP 366
Score = 209 (78.6 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 78/284 (27%), Positives = 139/284 (48%)
Query: 292 NYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
+Y++L N IS++ N ++ + L+E+RL+ N L I F L L + L N L
Sbjct: 69 SYLDLSMNNISQLLPNPLP-SL-RFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQL 126
Query: 352 KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN--LNVFSN 409
+ + T + +NL ++ ++ L N+I + F L +L LDL N L +F + SN
Sbjct: 127 RHVPTEALQNLRSLQSLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSN 186
Query: 410 ITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
+ K+ L +N I ++ E P I ++ +N IQ V + Q + LR L
Sbjct: 187 L--KE----LGFHSNNIRSIPEKAFVGNPSLI-TIHFYDNPIQFVGRSAFQHLPE-LRTL 238
Query: 470 YLD-FNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
L+ ++I D T NL+ L L + +++ V +PNLQ++DLS+N + L
Sbjct: 239 TLNGASQITEFPDLTGTANLESLTLTGAQISSLPQTVCNQ---LPNLQVLDLSYNLLEDL 295
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
F KL+ +++ HN + + D F + + L++++N+
Sbjct: 296 PS--FSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNK 337
Score = 203 (76.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 86/331 (25%), Positives = 148/331 (44%)
Query: 242 LLEISFSLFNSNEFPYYILNKNLNTL-EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
LL + S +E P NL+ +L + NNI + L +L L + L N
Sbjct: 47 LLRVDCSDLGLSELP-----SNLSVFTSYLDLSMNNISQLLPNPLPSLRFLEELRLAGNA 101
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
++ I F ++ LK + L NN L + ++ NL+ L ++ L N + S+ F
Sbjct: 102 LTYIPKGAFT-GLYS-LKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIHSLGKKCFD 159
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
L+++ + L++N + +P A L NL +L N ++ F S T ++
Sbjct: 160 GLHSLETLDLNYNNLDE-FPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLIT---IH 215
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
+N I + + + P +++L L+ ++I E P T +L L L +I L
Sbjct: 216 FYDNPIQFVGRSAFQHLP-ELRTLTLNGASQITEFPD---LTGTANLESLTLTGAQISSL 271
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
T L L++L L +N + + +F LQ IDL NEI + + F LR
Sbjct: 272 PQTVCNQLPNLQVLDLSYNLLEDLP--SFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLR 329
Query: 540 ILNISHNRLRSLPRDVFSNT-IIEKLDISYN 569
LN++ N++ + + FS + KLD+S N
Sbjct: 330 SLNLAWNKIAIIHPNAFSTLPSLIKLDLSSN 360
Score = 168 (64.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 85/303 (28%), Positives = 138/303 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T + F LY+L+ L L N+L+ + + + L+ L+ S L N+
Sbjct: 100 NALTYIPKGAFTGLYSLKVLMLQNNQLRHVPT-----EALQNLRSLQ-SLHLHNNR---I 150
Query: 258 YILNKN----LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNI 313
+ L K L++LE L ++ NN+ ++ L++L + N I I F N
Sbjct: 151 HSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNIRSIPEKAFVGN- 208
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLN---NMLNIVL 370
L I +N ++ + F +L EL T+TL+ + + T F +L N+ ++ L
Sbjct: 209 -PSLITIHFYDNPIQFVGRSAFQHLPELRTLTLN----GASQITEFPDLTGTANLESLTL 263
Query: 371 SFNQIKYIYPNAFVN-LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+ QI + P N LPNL LDL N L+D L FS Q ++L +N I +
Sbjct: 264 TGAQISSL-PQTVCNQLPNLQVLDLSYNLLED--LPSFSVCQKLQ---KIDLRHNEIYEI 317
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
+ D Q + ++SL+L+ N+I + N T SL KL L N + T L
Sbjct: 318 -KVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLP-SLIKLDLSSNLLSSFPITGLHGLTH 375
Query: 490 LEL 492
L+L
Sbjct: 376 LKL 378
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 58/215 (26%), Positives = 91/215 (42%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
LS N I + PN +L L +L L N L F+ + S + M L NN + ++
Sbjct: 73 LSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLM---LQNNQLRHV 129
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
+ Q ++SL L NNRI + SL L L++N + TA L
Sbjct: 130 -PTEALQNLRSLQSLHLHNNRIHSLGKKCFDGL-HSLETLDLNYNNLDEFP-TAIRTLSN 186
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH-NRL 548
L+ L NNI + ++ F+G P+L I N I + F +LR L ++ +++
Sbjct: 187 LKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQI 246
Query: 549 RSLPRDVFSNTIIEKLDISYNQDKIRPGRESNPRP 583
P D+ +E L ++ Q P N P
Sbjct: 247 TEFP-DLTGTANLESLTLTGAQISSLPQTVCNQLP 280
Score = 138 (53.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 93/354 (26%), Positives = 146/354 (41%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNS--KLRELEITGKDL 56
LDLS N +S L L + + L+ L L G+ L +G F L+ L + L
Sbjct: 71 LDLSMNNISQL----LPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQL 126
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMA-- 114
+ + A N+ + L L N +I L FD + ++E TLDL++N L A
Sbjct: 127 RHVPTEALQNLRSLQSLHLH--NNRIHSLGKKCFDGLHSLE--TLDLNYNNLDEFPTAIR 182
Query: 115 TLYSNVTKLQHLGTTILKDREKXXX---XXXXXXXRCNKITDLNGNLFRHLQKSIVKAKK 171
TL SN+ +L I EK N I + + F+HL + +
Sbjct: 183 TL-SNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPE----LRT 237
Query: 172 NNNNNEDQVSDREKXXXXXXXXXXRCN--KITDLNGNLFRHLYNLQELSLSFNKLQIIEL 229
N Q+++ +I+ L + L NLQ L LS+N L+ +L
Sbjct: 238 LTLNGASQITEFPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLE--DL 295
Query: 230 NSNVFDVFEKLQLLEISFS-LFNS--NEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
S F V +KLQ +++ + ++ + F + ++LN L W N I I +
Sbjct: 296 PS--FSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLN-LAW-----NKIAIIHPNAFS 347
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE-LIESDTFYNLK 339
L SL ++L N +S H H +L N+ L+ LI S+ F LK
Sbjct: 348 TLPSLIKLDLSSNLLSSFPITGLHGLTHLKLT----GNHALQSLISSENFPELK 397
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
P AF++ +L+ L ++ F L V + + P+ L N + + +KQ +
Sbjct: 709 PVAFLSFSSLINLTFISPEVIKFILLVVVPLPACLNPLLYILFNPHFKEDLVSLRKQTYV 768
Query: 440 YIKS 443
+ +S
Sbjct: 769 WTRS 772
>WB|WBGene00004929 [details] [associations]
symbol:soc-2 species:6239 "Caenorhabditis elegans"
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=IGI]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0031344
"regulation of cell projection organization" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068919 GO:GO:0008543 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0007517 InterPro:IPR025875 Pfam:PF12799
GO:GO:0040025 GO:GO:0046579 GO:GO:0031344 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AF054827 EMBL:FO080091 PIR:B88684
PIR:T30947 PIR:T42998 RefSeq:NP_001021259.1 RefSeq:NP_741391.2
UniGene:Cel.18171 ProteinModelPortal:Q22875 SMR:Q22875
IntAct:Q22875 MINT:MINT-115544 STRING:Q22875 PaxDb:Q22875
PRIDE:Q22875 EnsemblMetazoa:AC7.2a.1 EnsemblMetazoa:AC7.2a.2
GeneID:177286 KEGG:cel:CELE_AC7.2 UCSC:AC7.2b CTD:177286
WormBase:AC7.2a WormBase:AC7.2b InParanoid:Q22875 NextBio:896124
Uniprot:Q22875
Length = 559
Score = 221 (82.9 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 102/375 (27%), Positives = 187/375 (49%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS-NE 254
R N+I ++ + +L L+ L + NK++ EL S + KL L + +N
Sbjct: 173 RYNRIVAVDEQI-GNLSKLKMLDVRENKIR--ELPSAI----GKLTSLVVCLVSYNHLTR 225
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
P I + ++L L + +N++ + YS+ L +L I + YNKI I + L
Sbjct: 226 VPEEI--GDCHSLTQLDLQHNDLSELP-YSIGKLVNLVRIGIRYNKIRCIPSEL---ESC 279
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
++L+E + +N+L+L+ + L +++T+ LS N L + + + + I + NQ
Sbjct: 280 QQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQ 339
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV--FSNITSKQTPMNLNLSNNYITNLYEN 432
I I F L KL+L++N+L L++ +++IT LNLS N + L E+
Sbjct: 340 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITE------LNLSTNQLKVLPED 393
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
+K + I L LSNN+++++P N + + LR+L L+ NE++ + T G L L
Sbjct: 394 IEKLVNLEI--LVLSNNQLKKLP-NQIGNL-NKLRELDLEENELETVP-TEIGFLQHLTK 448
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF-SFKLRILNISHNRLRSL 551
L ++ N I + + R+ + +LQ + L N ++ + E + S K LN ++ L +L
Sbjct: 449 LWVQSNKI-LTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLN-DNSSLHNL 506
Query: 552 PRDVFSNTIIEKLDI 566
P F + + L+I
Sbjct: 507 P---FELALCQSLEI 518
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 71/308 (23%), Positives = 143/308 (46%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+L +LE L + +N + + + +Y + SL + L YN+I + + N+ K LK + +
Sbjct: 140 SLESLETLDLRHNKLTEVPSV-IYKIGSLETLWLRYNRIVAVDEQIG--NLSK-LKMLDV 195
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
N + + S L L +SYN L + + +++ + L N + + P +
Sbjct: 196 RENKIRELPS-AIGKLTSLVVCLVSYNHLTRVPE-EIGDCHSLTQLDLQHNDLSEL-PYS 252
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
L NLV++ ++ NK++ + S + S Q + +N++ L N P I
Sbjct: 253 IGKLVNLVRIGIRYNKIRC----IPSELESCQQLEEFIVESNHLQLLPPNLLTMLP-KIH 307
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+++LS N + P Q F ++ + ++ N+I + F L L+L+ N + V
Sbjct: 308 TVNLSRNELTAFPAGGPQQFVSTVT-INMEHNQISKIPIGIFSKATRLTKLNLKENEL-V 365
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
+ ++ ++LS N++ +L E L IL +S+N+L+ LP + + +
Sbjct: 366 SLPLDMGSWTSITELNLSTNQLKVLP-EDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLR 424
Query: 563 KLDISYNQ 570
+LD+ N+
Sbjct: 425 ELDLEENE 432
Score = 177 (67.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 71/317 (22%), Positives = 148/317 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L+ L + N + ++ + SL +L SL ++L +NK++++ + ++ L+ + L
Sbjct: 118 LVNLKKLGLSENALTSLPD-SLASLESLETLDLRHNKLTEVPSVIYKIG---SLETLWLR 173
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N + ++ + NL +L + + N ++ + + K L +++ ++S+N + + P
Sbjct: 174 YNRIVAVD-EQIGNLSKLKMLDVRENKIRELPSAIGK-LTSLVVCLVSYNHLTRV-PEEI 230
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
+ +L +LDLQ N L + ++ + + + N I + E+ ++ ++S
Sbjct: 231 GDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYN-KIRCIPSELESCQQLEEFIVES 289
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
N +Q +P N L T + + L NE+ A +++EHN I+ +
Sbjct: 290 -----NHLQLLPPNLL-TMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKI 343
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
F L ++L NE+ L + ++ + LN+S N+L+ LP D+ +E
Sbjct: 344 PIGIFSKATRLTKLNLKENELVSLPLDMGSWT-SITELNLSTNQLKVLPEDIEKLVNLEI 402
Query: 564 LDISYNQDKIRPGRESN 580
L +S NQ K P + N
Sbjct: 403 LVLSNNQLKKLPNQIGN 419
Score = 175 (66.7 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 91/333 (27%), Positives = 148/333 (44%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKL-QIIELNSNVFDV------FEKLQLLEISFSL 249
C+ +T L+ +H +L EL S KL ++ + + E Q LE F +
Sbjct: 233 CHSLTQLD---LQH-NDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLE-EF-I 286
Query: 250 FNSNEFPYYILNKNLNTL----EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
SN +L NL T+ + + N + S IN+E+N+ISKI
Sbjct: 287 VESNHLQ--LLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIP 344
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
+F + RL ++ L N L + D ++ ++ ELN LS N LK + + L
Sbjct: 345 IGIF--SKATRLTKLNLKENELVSLPLDMGSWTSITELN---LSTNQLK-VLPEDIEKLV 398
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N+ +VLS NQ+K + PN NL L +LDL++N+L+ V + I Q L + +
Sbjct: 399 NLEILVLSNNQLKKL-PNQIGNLNKLRELDLEENELE----TVPTEIGFLQHLTKLWVQS 453
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N I L + + + L L N + +P DSL+ LYL+ N H
Sbjct: 454 NKILTLPRSIGNLCSL--QDLRLGENNLTAIPEEI--GHLDSLKSLYLNDNSSLHNLPFE 509
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
LE++S+E++ ++ + G P+L I
Sbjct: 510 LALCQSLEIMSIENSPLSQIPPEITAGGPSLVI 542
Score = 167 (63.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 90/337 (26%), Positives = 150/337 (44%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDR 134
L ++ + LP L +E++E TLDL HNKL+ + + +Y K+ L T L+
Sbjct: 124 LGLSENALTSLPDSLAS-LESLE--TLDLRHNKLTEVP-SVIY----KIGSLETLWLRYN 175
Query: 135 EKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKN-----NNNNEDQVSDREKXXXX 189
K+ D+ N R L +I K + N+ +V +
Sbjct: 176 RIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHS 235
Query: 190 XXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL 249
+ N +++L ++ + L NL + + +NK++ I E Q LE F +
Sbjct: 236 LTQLDLQHNDLSELPYSIGK-LVNLVRIGIRYNKIRCIPSE------LESCQQLE-EF-I 286
Query: 250 FNSNEFPYYILNKNLNTL----EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
SN +L NL T+ + + N + S IN+E+N+ISKI
Sbjct: 287 VESNHLQ--LLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIP 344
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
+F + RL ++ L N L + D ++ ++ ELN LS N LK + + L
Sbjct: 345 IGIF--SKATRLTKLNLKENELVSLPLDMGSWTSITELN---LSTNQLK-VLPEDIEKLV 398
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
N+ +VLS NQ+K + PN NL L +LDL++N+L+
Sbjct: 399 NLEILVLSNNQLKKL-PNQIGNLNKLRELDLEENELE 434
Score = 166 (63.5 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 92/389 (23%), Positives = 178/389 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKL-----QLLEISFSLFN- 251
NK+T L + + L NL++L LS N L + + + E L +L E+ ++
Sbjct: 106 NKLTCLPTEIGQ-LVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKI 164
Query: 252 -SNEFPYYILNK---------NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
S E + N+ NL+ L+ L + N I+ + + ++ LTSL + YN +
Sbjct: 165 GSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPS-AIGKLTSLVVCLVSYNHL 223
Query: 302 SKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKN 361
+++ + + H L ++ L +N L + + L L I + YN ++ I + ++
Sbjct: 224 TRVPEEIG--DCHS-LTQLDLQHNDLSELPY-SIGKLVNLVRIGIRYNKIRCIPS-ELES 278
Query: 362 LNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNL 421
+ ++ N ++ + PN LP + ++L N+L F S T +N+
Sbjct: 279 CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVT---INM 335
Query: 422 SNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA 481
+N I+ + +A K L+L N + +P++ + ++ S+ +L L N++K L
Sbjct: 336 EHNQISKIPIGIFSKATRLTK-LNLKENELVSLPLD-MGSWT-SITELNLSTNQLKVLPE 392
Query: 482 TAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN-LQIIDLSFNEISMLTGEQFYFSFKLRI 540
L LE+L L +N + + + IG N L+ +DL NE+ + E F L
Sbjct: 393 D-IEKLVNLEILVLSNNQLKKLPNQ--IGNLNKLRELDLEENELETVPTE-IGFLQHLTK 448
Query: 541 LNISHNRLRSLPRDVFSNTIIEKLDISYN 569
L + N++ +LPR + + ++ L + N
Sbjct: 449 LWVQSNKILTLPRSIGNLCSLQDLRLGEN 477
Score = 165 (63.1 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 71/307 (23%), Positives = 144/307 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
+ +LE L + N I + + + NL+ L +++ NKI ++ + + L +S
Sbjct: 164 IGSLETLWLRYNRIVAV-DEQIGNLSKLKMLDVRENKIRELPSAIGKLT---SLVVCLVS 219
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N+L + + + L + L +N L + S L N++ I + +N+I+ I P+
Sbjct: 220 YNHLTRVPEE-IGDCHSLTQLDLQHNDLSELPY-SIGKLVNLVRIGIRYNKIRCI-PSEL 276
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
+ L + ++ N L+ N+ + + T +NLS N +T +Q + +
Sbjct: 277 ESCQQLEEFIVESNHLQLLPPNLLTMLPKIHT---VNLSRNELTAFPAGGPQQF-VSTVT 332
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+++ +N+I ++P+ A L KL L NE+ L G+ + L+L N + V+
Sbjct: 333 INMEHNQISKIPIGIFSK-ATRLTKLNLKENELVSLPLD-MGSWTSITELNLSTNQLKVL 390
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
+ + NL+I+ LS N++ L + + KLR L++ N L ++P ++ + K
Sbjct: 391 PE-DIEKLVNLEILVLSNNQLKKLPNQIGNLN-KLRELDLEENELETVPTEIGFLQHLTK 448
Query: 564 LDISYNQ 570
L + N+
Sbjct: 449 LWVQSNK 455
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 72/306 (23%), Positives = 137/306 (44%)
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
LT L + L NK++ + + LK++ LS N L + D+ +L+ L T+ L
Sbjct: 95 LTQLTELFLYKNKLTCLPTEIGQL---VNLKKLGLSENALTSLP-DSLASLESLETLDLR 150
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+N L + + +K + ++ + L +N+I + NL L LD+++NK+++ +
Sbjct: 151 HNKLTEVPSVIYK-IGSLETLWLRYNRIVAV-DEQIGNLSKLKMLDVRENKIRELP-SAI 207
Query: 408 SNITS-----------KQTPMNLNLSNNYIT-NLYENDKKQAPIYIKSL------DLSNN 449
+TS + P + ++ +L ND + P I L + N
Sbjct: 208 GKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYN 267
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+I+ +P L++ L + ++ N ++ L L + ++L N +
Sbjct: 268 KIRCIPSE-LES-CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQ 325
Query: 510 GMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
+ I++ N+IS + F + +L LN+ N L SLP D+ S T I +L++S N
Sbjct: 326 QFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTN 385
Query: 570 QDKIRP 575
Q K+ P
Sbjct: 386 QLKVLP 391
Score = 73 (30.8 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLG---TTILKGDQLQGIFNSKLRELEITGKDLKF 58
TLDL HNKL+ + + +Y + L+ L I+ D+ G SKL+ L++ ++
Sbjct: 146 TLDLRHNKLTEVP-SVIYK-IGSLETLWLRYNRIVAVDEQIGNL-SKLKMLDVRENKIRE 202
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
+ PSA + + + ++ + +P + D ++ Q LDL HN LS L
Sbjct: 203 L-PSAIGKLTSL--VVCLVSYNHLTRVPEEIGD-CHSLTQ--LDLQHNDLSEL 249
>UNIPROTKB|Q22875 [details] [associations]
symbol:soc-2 "Leucine-rich repeat protein soc-2"
species:6239 "Caenorhabditis elegans" [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IMP]
[GO:0040025 "vulval development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 EMBL:AF068919
GO:GO:0008543 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007517 InterPro:IPR025875 Pfam:PF12799 GO:GO:0040025
GO:GO:0046579 GO:GO:0031344 HSSP:P07359 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AF054827 EMBL:FO080091 PIR:B88684 PIR:T30947 PIR:T42998
RefSeq:NP_001021259.1 RefSeq:NP_741391.2 UniGene:Cel.18171
ProteinModelPortal:Q22875 SMR:Q22875 IntAct:Q22875 MINT:MINT-115544
STRING:Q22875 PaxDb:Q22875 PRIDE:Q22875 EnsemblMetazoa:AC7.2a.1
EnsemblMetazoa:AC7.2a.2 GeneID:177286 KEGG:cel:CELE_AC7.2
UCSC:AC7.2b CTD:177286 WormBase:AC7.2a WormBase:AC7.2b
InParanoid:Q22875 NextBio:896124 Uniprot:Q22875
Length = 559
Score = 221 (82.9 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 102/375 (27%), Positives = 187/375 (49%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS-NE 254
R N+I ++ + +L L+ L + NK++ EL S + KL L + +N
Sbjct: 173 RYNRIVAVDEQI-GNLSKLKMLDVRENKIR--ELPSAI----GKLTSLVVCLVSYNHLTR 225
Query: 255 FPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
P I + ++L L + +N++ + YS+ L +L I + YNKI I + L
Sbjct: 226 VPEEI--GDCHSLTQLDLQHNDLSELP-YSIGKLVNLVRIGIRYNKIRCIPSEL---ESC 279
Query: 315 KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ 374
++L+E + +N+L+L+ + L +++T+ LS N L + + + + I + NQ
Sbjct: 280 QQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQ 339
Query: 375 IKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV--FSNITSKQTPMNLNLSNNYITNLYEN 432
I I F L KL+L++N+L L++ +++IT LNLS N + L E+
Sbjct: 340 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITE------LNLSTNQLKVLPED 393
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
+K + I L LSNN+++++P N + + LR+L L+ NE++ + T G L L
Sbjct: 394 IEKLVNLEI--LVLSNNQLKKLP-NQIGNL-NKLRELDLEENELETVP-TEIGFLQHLTK 448
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF-SFKLRILNISHNRLRSL 551
L ++ N I + + R+ + +LQ + L N ++ + E + S K LN ++ L +L
Sbjct: 449 LWVQSNKI-LTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLN-DNSSLHNL 506
Query: 552 PRDVFSNTIIEKLDI 566
P F + + L+I
Sbjct: 507 P---FELALCQSLEI 518
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 71/308 (23%), Positives = 143/308 (46%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+L +LE L + +N + + + +Y + SL + L YN+I + + N+ K LK + +
Sbjct: 140 SLESLETLDLRHNKLTEVPSV-IYKIGSLETLWLRYNRIVAVDEQIG--NLSK-LKMLDV 195
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
N + + S L L +SYN L + + +++ + L N + + P +
Sbjct: 196 RENKIRELPS-AIGKLTSLVVCLVSYNHLTRVPE-EIGDCHSLTQLDLQHNDLSEL-PYS 252
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
L NLV++ ++ NK++ + S + S Q + +N++ L N P I
Sbjct: 253 IGKLVNLVRIGIRYNKIRC----IPSELESCQQLEEFIVESNHLQLLPPNLLTMLP-KIH 307
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+++LS N + P Q F ++ + ++ N+I + F L L+L+ N + V
Sbjct: 308 TVNLSRNELTAFPAGGPQQFVSTVT-INMEHNQISKIPIGIFSKATRLTKLNLKENEL-V 365
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
+ ++ ++LS N++ +L E L IL +S+N+L+ LP + + +
Sbjct: 366 SLPLDMGSWTSITELNLSTNQLKVLP-EDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLR 424
Query: 563 KLDISYNQ 570
+LD+ N+
Sbjct: 425 ELDLEENE 432
Score = 177 (67.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 71/317 (22%), Positives = 148/317 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L+ L + N + ++ + SL +L SL ++L +NK++++ + ++ L+ + L
Sbjct: 118 LVNLKKLGLSENALTSLPD-SLASLESLETLDLRHNKLTEVPSVIYKIG---SLETLWLR 173
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N + ++ + NL +L + + N ++ + + K L +++ ++S+N + + P
Sbjct: 174 YNRIVAVD-EQIGNLSKLKMLDVRENKIRELPSAIGK-LTSLVVCLVSYNHLTRV-PEEI 230
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
+ +L +LDLQ N L + ++ + + + N I + E+ ++ ++S
Sbjct: 231 GDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYN-KIRCIPSELESCQQLEEFIVES 289
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
N +Q +P N L T + + L NE+ A +++EHN I+ +
Sbjct: 290 -----NHLQLLPPNLL-TMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKI 343
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
F L ++L NE+ L + ++ + LN+S N+L+ LP D+ +E
Sbjct: 344 PIGIFSKATRLTKLNLKENELVSLPLDMGSWT-SITELNLSTNQLKVLPEDIEKLVNLEI 402
Query: 564 LDISYNQDKIRPGRESN 580
L +S NQ K P + N
Sbjct: 403 LVLSNNQLKKLPNQIGN 419
Score = 175 (66.7 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 91/333 (27%), Positives = 148/333 (44%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKL-QIIELNSNVFDV------FEKLQLLEISFSL 249
C+ +T L+ +H +L EL S KL ++ + + E Q LE F +
Sbjct: 233 CHSLTQLD---LQH-NDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLE-EF-I 286
Query: 250 FNSNEFPYYILNKNLNTL----EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
SN +L NL T+ + + N + S IN+E+N+ISKI
Sbjct: 287 VESNHLQ--LLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIP 344
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
+F + RL ++ L N L + D ++ ++ ELN LS N LK + + L
Sbjct: 345 IGIF--SKATRLTKLNLKENELVSLPLDMGSWTSITELN---LSTNQLK-VLPEDIEKLV 398
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N+ +VLS NQ+K + PN NL L +LDL++N+L+ V + I Q L + +
Sbjct: 399 NLEILVLSNNQLKKL-PNQIGNLNKLRELDLEENELE----TVPTEIGFLQHLTKLWVQS 453
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA 483
N I L + + + L L N + +P DSL+ LYL+ N H
Sbjct: 454 NKILTLPRSIGNLCSL--QDLRLGENNLTAIPEEI--GHLDSLKSLYLNDNSSLHNLPFE 509
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
LE++S+E++ ++ + G P+L I
Sbjct: 510 LALCQSLEIMSIENSPLSQIPPEITAGGPSLVI 542
Score = 167 (63.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 90/337 (26%), Positives = 150/337 (44%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDR 134
L ++ + LP L +E++E TLDL HNKL+ + + +Y K+ L T L+
Sbjct: 124 LGLSENALTSLPDSLAS-LESLE--TLDLRHNKLTEVP-SVIY----KIGSLETLWLRYN 175
Query: 135 EKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKN-----NNNNEDQVSDREKXXXX 189
K+ D+ N R L +I K + N+ +V +
Sbjct: 176 RIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHS 235
Query: 190 XXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL 249
+ N +++L ++ + L NL + + +NK++ I E Q LE F +
Sbjct: 236 LTQLDLQHNDLSELPYSIGK-LVNLVRIGIRYNKIRCIPSE------LESCQQLE-EF-I 286
Query: 250 FNSNEFPYYILNKNLNTL----EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
SN +L NL T+ + + N + S IN+E+N+ISKI
Sbjct: 287 VESNHLQ--LLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIP 344
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLN 363
+F + RL ++ L N L + D ++ ++ ELN LS N LK + + L
Sbjct: 345 IGIF--SKATRLTKLNLKENELVSLPLDMGSWTSITELN---LSTNQLK-VLPEDIEKLV 398
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
N+ +VLS NQ+K + PN NL L +LDL++N+L+
Sbjct: 399 NLEILVLSNNQLKKL-PNQIGNLNKLRELDLEENELE 434
Score = 166 (63.5 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 92/389 (23%), Positives = 178/389 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKL-----QLLEISFSLFN- 251
NK+T L + + L NL++L LS N L + + + E L +L E+ ++
Sbjct: 106 NKLTCLPTEIGQ-LVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKI 164
Query: 252 -SNEFPYYILNK---------NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI 301
S E + N+ NL+ L+ L + N I+ + + ++ LTSL + YN +
Sbjct: 165 GSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPS-AIGKLTSLVVCLVSYNHL 223
Query: 302 SKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKN 361
+++ + + H L ++ L +N L + + L L I + YN ++ I + ++
Sbjct: 224 TRVPEEIG--DCHS-LTQLDLQHNDLSELPY-SIGKLVNLVRIGIRYNKIRCIPS-ELES 278
Query: 362 LNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNL 421
+ ++ N ++ + PN LP + ++L N+L F S T +N+
Sbjct: 279 CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVT---INM 335
Query: 422 SNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA 481
+N I+ + +A K L+L N + +P++ + ++ S+ +L L N++K L
Sbjct: 336 EHNQISKIPIGIFSKATRLTK-LNLKENELVSLPLD-MGSWT-SITELNLSTNQLKVLPE 392
Query: 482 TAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN-LQIIDLSFNEISMLTGEQFYFSFKLRI 540
L LE+L L +N + + + IG N L+ +DL NE+ + E F L
Sbjct: 393 D-IEKLVNLEILVLSNNQLKKLPNQ--IGNLNKLRELDLEENELETVPTE-IGFLQHLTK 448
Query: 541 LNISHNRLRSLPRDVFSNTIIEKLDISYN 569
L + N++ +LPR + + ++ L + N
Sbjct: 449 LWVQSNKILTLPRSIGNLCSLQDLRLGEN 477
Score = 165 (63.1 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 71/307 (23%), Positives = 144/307 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
+ +LE L + N I + + + NL+ L +++ NKI ++ + + L +S
Sbjct: 164 IGSLETLWLRYNRIVAV-DEQIGNLSKLKMLDVRENKIRELPSAIGKLT---SLVVCLVS 219
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N+L + + + L + L +N L + S L N++ I + +N+I+ I P+
Sbjct: 220 YNHLTRVPEE-IGDCHSLTQLDLQHNDLSELPY-SIGKLVNLVRIGIRYNKIRCI-PSEL 276
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
+ L + ++ N L+ N+ + + T +NLS N +T +Q + +
Sbjct: 277 ESCQQLEEFIVESNHLQLLPPNLLTMLPKIHT---VNLSRNELTAFPAGGPQQF-VSTVT 332
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
+++ +N+I ++P+ A L KL L NE+ L G+ + L+L N + V+
Sbjct: 333 INMEHNQISKIPIGIFSK-ATRLTKLNLKENELVSLPLD-MGSWTSITELNLSTNQLKVL 390
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
+ + NL+I+ LS N++ L + + KLR L++ N L ++P ++ + K
Sbjct: 391 PE-DIEKLVNLEILVLSNNQLKKLPNQIGNLN-KLRELDLEENELETVPTEIGFLQHLTK 448
Query: 564 LDISYNQ 570
L + N+
Sbjct: 449 LWVQSNK 455
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 72/306 (23%), Positives = 137/306 (44%)
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
LT L + L NK++ + + LK++ LS N L + D+ +L+ L T+ L
Sbjct: 95 LTQLTELFLYKNKLTCLPTEIGQL---VNLKKLGLSENALTSLP-DSLASLESLETLDLR 150
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
+N L + + +K + ++ + L +N+I + NL L LD+++NK+++ +
Sbjct: 151 HNKLTEVPSVIYK-IGSLETLWLRYNRIVAV-DEQIGNLSKLKMLDVRENKIRELP-SAI 207
Query: 408 SNITS-----------KQTPMNLNLSNNYIT-NLYENDKKQAPIYIKSL------DLSNN 449
+TS + P + ++ +L ND + P I L + N
Sbjct: 208 GKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYN 267
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+I+ +P L++ L + ++ N ++ L L + ++L N +
Sbjct: 268 KIRCIPSE-LES-CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQ 325
Query: 510 GMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
+ I++ N+IS + F + +L LN+ N L SLP D+ S T I +L++S N
Sbjct: 326 QFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTN 385
Query: 570 QDKIRP 575
Q K+ P
Sbjct: 386 QLKVLP 391
Score = 73 (30.8 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLG---TTILKGDQLQGIFNSKLRELEITGKDLKF 58
TLDL HNKL+ + + +Y + L+ L I+ D+ G SKL+ L++ ++
Sbjct: 146 TLDLRHNKLTEVP-SVIYK-IGSLETLWLRYNRIVAVDEQIGNL-SKLKMLDVRENKIRE 202
Query: 59 IDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVL 111
+ PSA + + + ++ + +P + D ++ Q LDL HN LS L
Sbjct: 203 L-PSAIGKLTSL--VVCLVSYNHLTRVPEEIGD-CHSLTQ--LDLQHNDLSEL 249
>UNIPROTKB|Q8SPE9 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9600 "Pongo
pygmaeus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=ISS]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR017241
InterPro:IPR027168 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0006954 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0042116 InterPro:IPR025875 Pfam:PF12799
GO:GO:0004888 GO:GO:0046696 SUPFAM:SSF52200 GO:GO:0001875
GO:GO:0032497 HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9
eggNOG:NOG249751 HOGENOM:HOG000037951 EMBL:AF497562 EMBL:AF497560
EMBL:AF497561 ProteinModelPortal:Q8SPE9 SMR:Q8SPE9 STRING:Q8SPE9
InParanoid:Q8SPE9 Uniprot:Q8SPE9
Length = 828
Score = 178 (67.7 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 75/284 (26%), Positives = 133/284 (46%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYN----KISKIHNNLFHF-NIH-KRLKEIRLSNNYLE 328
N + N+ ++SL ++T + + YN + ++ F + K LK + + N
Sbjct: 303 NCLANVSSFSLVSVTIKSVKDFSYNFGWQHLELVNCKFGQFPTLELKSLKRLTFTANKGG 362
Query: 329 LIESDTFYNLKELNTITLSYNLL--KSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNL 386
S+ +L L + LS N L K + S ++ + LSFN + + N F+ L
Sbjct: 363 NAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNDVITMGSN-FLGL 419
Query: 387 PNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
L LD Q + LK ++ FS S + + L++S+ + T + N +K L +
Sbjct: 420 EQLEHLDFQHSNLKQ--MSEFSVFLSLRNLIYLDISHTH-TRVAFNGIFNGLSSLKVLKM 476
Query: 447 SNNRIQEVPVNFLQTFADSLRKL-YLDFNE--IKHLDATAFGNLDVLELLSLEHNNIAVV 503
+ N QE NFL LR L +LD ++ ++ L TAF +L L++L++ HNN +
Sbjct: 477 AGNSFQE---NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 533
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQF-YFSFKLRILNISHN 546
+ + +LQ++D S N I ++ +F L LN++ N
Sbjct: 534 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 577
Score = 148 (57.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 91/379 (24%), Positives = 165/379 (43%)
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL-FNSNEFPYYILNKNLNT 266
F +L NL+ L LS NK+Q I V ++ LL +S L N+ F K +
Sbjct: 169 FSNLTNLEHLDLSSNKIQSIYCKD--LQVLHQMPLLNLSLDLSLNAMNFIQPGAFKEIR- 225
Query: 267 LEWLAMDNN-NIKNIRNYSLYNLTSLNYINL---EYNK---ISKIHNNLFHFNIHKRLKE 319
L L + N+ + N+ + L L +L E+ + K + + ++E
Sbjct: 226 LHKLTLRNSFDSLNVMKTCIQGLAGLEVHHLVLGEFRNEKNLEKFDTSALEGLCNLTIEE 285
Query: 320 IRLS--NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQIK 376
RL+ + YL+ I D F L +++ +L +KS+K S+ L +V F Q
Sbjct: 286 FRLAYLDYYLDDI-IDLFNCLANVSSFSLVSVTIKSVKDFSYNFGWQHLELVNCKFGQ-- 342
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+P + L +L +L NK N FS + L+LS N ++ ++ Q
Sbjct: 343 --FPT--LELKSLKRLTFTANK----GGNAFSEVDLPSLEF-LDLSRNGLS--FKGCCSQ 391
Query: 437 API---YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL-DATAFGNLDVLEL 492
+ +K LDLS N + + NFL + L L + +K + + + F +L L
Sbjct: 392 SDFGTTSLKYLDLSFNDVITMGSNFLGL--EQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 449
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK-LRILNISHNRLRSL 551
L + H + V F G+ +L+++ ++ N + + L L++S +L L
Sbjct: 450 LDISHTHTRVAFNGIFNGLSSLKVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 509
Query: 552 PRDVFSN-TIIEKLDISYN 569
F++ + ++ L++S+N
Sbjct: 510 SPTAFNSLSSLQVLNMSHN 528
Score = 115 (45.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 93/398 (23%), Positives = 167/398 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISF-SLFNS-NEF 255
NKI + + L+ + L+LS + L + +N F++++L +++ + F+S N
Sbjct: 183 NKIQSIYCKDLQVLHQMPLLNLSLD-LSLNAMNFIQPGAFKEIRLHKLTLRNSFDSLNVM 241
Query: 256 PYYILN-KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH---- 310
I L + + N KN+ + L L + +E +++ + L
Sbjct: 242 KTCIQGLAGLEVHHLVLGEFRNEKNLEKFDTSALEGLCNLTIEEFRLAYLDYYLDDIIDL 301
Query: 311 FNIHKRLKEIRLSNNYLELIESDTFYNL--KELNTITLSYNLLKSIKTTSFKNLNNMLNI 368
FN + L + ++ ++ D YN + L + + +++ S K L
Sbjct: 302 FNCLANVSSFSLVSVTIKSVK-DFSYNFGWQHLELVNCKFGQFPTLELKSLKRL------ 354
Query: 369 VLSFNQIKYIYPNAF--VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNY 425
+F K NAF V+LP+L LDL N L F S T + L+LS N
Sbjct: 355 --TFTANKG--GNAFSEVDLPSLEFLDLSRNGLS-FK-GCCSQSDFGTTSLKYLDLSFND 408
Query: 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL-YLDFNEIKHLDAT-- 482
+ + N + + LD ++ ++++ F F SLR L YLD + A
Sbjct: 409 VITMGSNFLGLEQL--EHLDFQHSNLKQMS-EF-SVFL-SLRNLIYLDISHTHTRVAFNG 463
Query: 483 AFGNLDVLELLSLEHNNIAV-VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRIL 541
F L L++L + N+ + F + NL +DLS ++ L+ F L++L
Sbjct: 464 IFNGLSSLKVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523
Query: 542 NISHNRLRSLPRDVFSNTIIEKLDI-SYNQDKIRPGRE 578
N+SHN SL D F + L + Y+ + I ++
Sbjct: 524 NMSHNNFFSL--DTFPYKCLNSLQVLDYSLNHIMTSKK 559
Score = 95 (38.5 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQ-GIFNS--KLRELEITGKDLKFI 59
LDLS N L L + +S +LQ L + + ++ G + S L L +TG ++ +
Sbjct: 57 LDLSFNPLRHLGSYSFFS-FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQNL 115
Query: 60 DPSAFDNIDACYDLTLKITN-TQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
AF + + L TN +E P G ++ +++ L+++HN + + +S
Sbjct: 116 ALGAFSGLSSLQKLVAVETNLASLENFPIG---HLKTLKE--LNVAHNLIQSFKLPEYFS 170
Query: 119 NVTKLQHL 126
N+T L+HL
Sbjct: 171 NLTNLEHL 178
Score = 75 (31.5 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLR----------ELEIT 52
L+++HN + + +SN+T L+HL L +++Q I+ L+ L+++
Sbjct: 153 LNVAHNLIQSFKLPEYFSNLTNLEHLD---LSSNKIQSIYCKDLQVLHQMPLLNLSLDLS 209
Query: 53 GKDLKFIDPSAFDNIDACYDLTLK 76
+ FI P AF I + LTL+
Sbjct: 210 LNAMNFIQPGAFKEI-RLHKLTLR 232
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 217 (81.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 72/255 (28%), Positives = 120/255 (47%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQ-IKYI 378
I L N L+ + F L L T++L YN + I +FK L N++ + ++ N+ I+Y+
Sbjct: 63 INLDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYL 122
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVF-SNITSKQTPMNLNLSNNY--ITNLYENDKK 435
+ F L LV+LDL D L + +F IT K+ L NN+ + +
Sbjct: 123 HTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQITLKEL---LCFQNNFRRVPGALRGMEN 179
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+Y L N+I+ V N L SL+ L L N I + AF +L LE L
Sbjct: 180 LTHVY-----LERNKIEAVAYNSLLGLT-SLKYLNLQENRINVIHDEAFKDLIRLENFYL 233
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDV 555
N + + ++ F G+ NL++++L N ++ ++ F +L +L + NRL +
Sbjct: 234 NDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGS 293
Query: 556 FSN-TIIEKLDISYN 569
F N T + L ++ N
Sbjct: 294 FENLTSLITLHLNSN 308
Score = 203 (76.5 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 61/208 (29%), Positives = 97/208 (46%)
Query: 203 LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNK 262
L+ F L L L LS + + +F E++ L E+ N P + +
Sbjct: 122 LHTRTFTALKRLVRLDLS--DCNLFNMPDRIF--LEQITLKELLCFQNNFRRVPGAL--R 175
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
+ L + ++ N I+ + SL LTSL Y+NL+ N+I+ IH+ F I RL+ L
Sbjct: 176 GMENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLI--RLENFYL 233
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
++N L + F L L + L NLL ++ T F +L + + L N++ YI +
Sbjct: 234 NDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGS 293
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNI 410
F NL +L+ L L N L +VF I
Sbjct: 294 FENLTSLITLHLNSNNLTSLPFSVFQPI 321
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 62/230 (26%), Positives = 117/230 (50%)
Query: 340 ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK- 398
E ++I L N LK + +F L ++ + L +N I +I P AF LPNLV+L + N+
Sbjct: 59 EASSINLDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEY 118
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNF 458
++ + F T+ + + L+LS+ + N+ + + I +K L N + VP
Sbjct: 119 IRYLHTRTF---TALKRLVRLDLSDCNLFNMPDRIFLEQ-ITLKELLCFQNNFRRVP-GA 173
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIID 518
L+ ++L +YL+ N+I+ + + L L+ L+L+ N I V+ F + L+
Sbjct: 174 LRGM-ENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFY 232
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISY 568
L+ N + L + F L++LN+ N L ++ + FS+ + +L++ Y
Sbjct: 233 LNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLV--ELEVLY 280
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 68/271 (25%), Positives = 132/271 (48%)
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN-YLELI 330
+D N++K + + L SL ++L+YN IS I F + L E+++++N Y+ +
Sbjct: 65 LDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFK-GL-PNLVELKMAHNEYIRYL 122
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
+ TF LK L + LS L ++ F + ++ N + + P A + NL
Sbjct: 123 HTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQITLKELLCFQNNFRRV-PGALRGMENLT 181
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
+ L+ NK++ N +TS + LNL N I +++ K I +++ L++N
Sbjct: 182 HVYLERNKIEAVAYNSLLGLTSLKY---LNLQENRINVIHDEAFKDL-IRLENFYLNDNL 237
Query: 451 IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIG 510
+ ++P + ++ L+ L L N + ++ T F +L LE+L L+ N ++ + +F
Sbjct: 238 LVDLPQQAFKGLSN-LKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFEN 296
Query: 511 MPNLQIIDLSFNEISMLTGEQF---YFSFKL 538
+ +L + L+ N ++ L F YF +L
Sbjct: 297 LTSLITLHLNSNNLTSLPFSVFQPIYFIGRL 327
Score = 168 (64.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 74/272 (27%), Positives = 126/272 (46%)
Query: 294 INLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN-LLK 352
INL+ N + + F LK + L N + I F L L + +++N ++
Sbjct: 63 INLDKNSLKFLSERAF--GTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIR 120
Query: 353 SIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
+ T +F L ++ + LS N F N+P+ ++ L+ LK+ L F N
Sbjct: 121 YLHTRTFTALKRLVRLDLSDC-------NLF-NMPD--RIFLEQITLKE--LLCFQN-NF 167
Query: 413 KQTPMNLNLSNNYITNLY-ENDKKQAPIYIKSLDLSNNR---IQEVPVNFL--QTFADSL 466
++ P L N +T++Y E +K +A Y L L++ + +QE +N + + F D +
Sbjct: 168 RRVPGALRGMEN-LTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLI 226
Query: 467 R--KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
R YL+ N + L AF L L++L+L N + V K F + L+++ L N +
Sbjct: 227 RLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRL 286
Query: 525 SMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
S + F L L+++ N L SLP VF
Sbjct: 287 SYIEDGSFENLTSLITLHLNSNNLTSLPFSVF 318
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 37/108 (34%), Positives = 57/108 (52%)
Query: 471 LDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE-ISMLTG 529
LD N +K L AFG L L+ LSL++NNI+ + F G+PNL + ++ NE I L
Sbjct: 65 LDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHT 124
Query: 530 EQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQDKIRPG 576
F +L L++S L ++P +F I +++L N + PG
Sbjct: 125 RTFTALKRLVRLDLSDCNLFNMPDRIFLEQITLKELLCFQNNFRRVPG 172
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 233 (87.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 94/378 (24%), Positives = 165/378 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T +N N F L L+ L L N QI+ + FD +L+ L ++ + + + P
Sbjct: 64 NNLTRINRNDFTGLKYLRVLQLMEN--QIVTVERGAFDEMRELERLRLNRNQLH--QLPE 119
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ KN L L + N I+ I + T + + L+ N IS I + F + L
Sbjct: 120 LLFQKNA-ALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFR--AMRGL 176
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKN--LNNMLNIVLSFNQI 375
+ + L+NN + I +F ++ +L T L N L S+ + L NI L F Q
Sbjct: 177 EVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERPNIGL-FTQC 235
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK- 434
P +N+ + K + + D + +++S P + +NN + +
Sbjct: 236 SSPAPLRGLNVAEVQKHEFSCSGQSDSAVGQSCSLSSGSCPAVCSCNNNIVDCRGKGPTL 295
Query: 435 --KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
P + + L N I+ +P + LR++ L N+I L AF L L
Sbjct: 296 IPSSLPDSMTEIRLEQNSIKSIPPGAFSPYK-KLRRIDLSNNQISELAPDAFQGLRSLNS 354
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L L N I + + F G+ LQ++ L+ N+I L F L +L++ N++++L
Sbjct: 355 LVLYGNKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLA 414
Query: 553 RDVFSNT-IIEKLDISYN 569
+ FS+ I+ L ++ N
Sbjct: 415 KGTFSSLRAIQTLHLAQN 432
Score = 168 (64.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 68/306 (22%), Positives = 139/306 (45%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K L L+ + + NN I I + + +S+N ++L N++ H+ +F + + L+ +
Sbjct: 555 KTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFR-GL-EGLRMLM 612
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L NN + I +++F L + ++L N L +I +F L ++ + L N N
Sbjct: 613 LRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPF-----N 667
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY-ITNLYENDKKQAPIY 440
L L L++ K+ N K+ P+ + ++ + +E+ P++
Sbjct: 668 CNCRLAWLSSW-LRNRKIVTGNPRCHRPAFLKEIPLQDVAAPDFRCEDDHEDVSCAPPVH 726
Query: 441 -------IKSL-DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
++S+ SN +Q +P + ++ +LYLD N++ + + L+L
Sbjct: 727 CPADCTCLESVVRCSNKHLQALPKGTPR----NITELYLDGNQLSTVPKE-LSSFKSLQL 781
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
+ L +N I+ + +F M L + LS+N + + F LR+L++ N + LP
Sbjct: 782 VDLSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELP 841
Query: 553 RDVFSN 558
+FS+
Sbjct: 842 DGIFSD 847
Score = 154 (59.3 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 90/342 (26%), Positives = 143/342 (41%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNN 275
E L+ N++ IE F L+ + +S + + E + ++N L A N
Sbjct: 537 EPRLNNNEITTIEA-MGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTA---N 592
Query: 276 NIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTF 335
+ + L L + L N+IS IHNN F +H ++ + L +N L I F
Sbjct: 593 QLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFT-GLHN-VRLLSLYDNTLTTIAPGAF 650
Query: 336 YNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF-NQIKYIYPNAFVNLPNLVK-LD 393
L+ L+T+ NLL + F N N L + S+ K + N + P +K +
Sbjct: 651 DTLQSLSTL----NLLAN----PF-NCNCRLAWLSSWLRNRKIVTGNPRCHRPAFLKEIP 701
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK--QA-----PIYIKSLDL 446
LQD DF S P++ + ++ K QA P I L L
Sbjct: 702 LQDVAAPDFRCEDDHEDVSCAPPVHCPADCTCLESVVRCSNKHLQALPKGTPRNITELYL 761
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
N++ VP L +F SL+ + L N I L ++F N+ L L L +N + +
Sbjct: 762 DGNQLSTVPKE-LSSFK-SLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTL 819
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F G+ +L+++ L N+IS L F + L L I N L
Sbjct: 820 AFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGANPL 861
Score = 134 (52.2 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
NT E L ++ NN+ I L L + L N+I + F + + L+ +RL+
Sbjct: 55 NT-ERLELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAF--DEMRELERLRLNR 111
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N L + F L+ + LS N +++I +F+ ++ N+ L N I I AF
Sbjct: 112 NQLHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFR 171
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
+ L L L +N + ++ F+++ +T L+ SNN +
Sbjct: 172 AMRGLEVLTLNNNNISSIPVSSFNHMPKLRT-FRLH-SNNLV 211
Score = 117 (46.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 75/359 (20%), Positives = 145/359 (40%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
++ E+ L N ++ I F ++KL+ +++S + S P + L +L L +
Sbjct: 303 SMTEIRLEQNSIKSIP--PGAFSPYKKLRRIDLSNNQI-SELAPDAF--QGLRSLNSLVL 357
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
N I ++ L +L + L NKI + N F ++ + L + L +N ++ +
Sbjct: 358 YGNKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQ-DL-QNLSLLSLYDNKIQTLAK 415
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNI-VLSFNQIKYIYPNAFVNL----- 386
TF +L+ + T+ L+ N I + K L + L + + + P N
Sbjct: 416 GTFSSLRAIQTLHLAQNPF--ICDCNLKWLADYLRSNPIETSGARCTSPRRLANKRIGQI 473
Query: 387 -PNLVKLDLQDNKL----KDFNLNVFSNITSKQTPMNLNLSNNYI--TNL-YENDKKQAP 438
+ ++ +D LN N P +N + +NL + + P
Sbjct: 474 KSKKFRCSAKEQYAIPGTEDSRLNNDCN-NDPVCPAKCRCESNVVDCSNLRLDRIPEHVP 532
Query: 439 IYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
L+NN I + + +T L+K+ L N+I ++ AF + L L
Sbjct: 533 ASTTEPRLNNNEITTIEAMGAFKTLTH-LKKINLSNNKISEIEDGAFEGASSVNELHLTA 591
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + + F G+ L+++ L N IS + F +R+L++ N L ++ F
Sbjct: 592 NQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAF 650
Score = 89 (36.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 29/115 (25%), Positives = 57/115 (49%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT-AFGNLDVLELLSLEHNNIAV 502
+D SN R+ +P + S + L+ NEI ++A AF L L+ ++L +N I+
Sbjct: 517 VDCSNLRLDRIP----EHVPASTTEPRLNNNEITTIEAMGAFKTLTHLKKINLSNNKISE 572
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
+ F G ++ + L+ N++ + F LR+L + +NR+ + + F+
Sbjct: 573 IEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFT 627
Score = 76 (31.8 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 24/82 (29%), Positives = 36/82 (43%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNK 223
K + + +NN + D + NKITDL +F L+ LQ L L+ NK
Sbjct: 326 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNANK 385
Query: 224 LQIIELNSNVFDVFEKLQLLEI 245
+ L +N F + L LL +
Sbjct: 386 IHC--LRANTFQDLQNLSLLSL 405
Score = 66 (28.3 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 21/81 (25%), Positives = 37/81 (45%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
LR L++ + ++ AFD + L++ Q+ +LP LF K N LDLS
Sbjct: 80 LRVLQLMENQIVTVERGAFDEMRELE--RLRLNRNQLHQLPELLFQK--NAALSRLDLSE 135
Query: 106 NKLSVLNMATLYSNVTKLQHL 126
N + + + T +++L
Sbjct: 136 NFIQAIPRKA-FRGATDIKNL 155
Score = 62 (26.9 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
LE+ G +L I+ + F + Y L++ QI + G FD++ +E+ L L+ N+L
Sbjct: 59 LELNGNNLTRINRNDFTGLK--YLRVLQLMENQIVTVERGAFDEMRELER--LRLNRNQL 114
Query: 109 SVL 111
L
Sbjct: 115 HQL 117
Score = 42 (19.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 8/30 (26%), Positives = 20/30 (66%)
Query: 541 LNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
L + N+L ++P+++ S ++ +D+S N+
Sbjct: 759 LYLDGNQLSTVPKELSSFKSLQLVDLSNNR 788
>UNIPROTKB|E9PCA3 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0030154 GO:GO:0004930 GO:GO:0007189 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007567
InterPro:IPR000372 SMART:SM00013 EMBL:AC107219 GO:GO:0060427
HGNC:HGNC:19718 GO:GO:0060658 EMBL:AC019341 EMBL:AC107056
EMBL:AC108017 EMBL:AC121161 EMBL:AC125489 IPI:IPI00965023
ProteinModelPortal:E9PCA3 SMR:E9PCA3 Ensembl:ENST00000460056
ArrayExpress:E9PCA3 Bgee:E9PCA3 Uniprot:E9PCA3
Length = 676
Score = 220 (82.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 65/245 (26%), Positives = 112/245 (45%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
++ + + L N + + D F N +L + L N + SI +F+ LN++ + LS
Sbjct: 42 SVSSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLS 101
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I ++ P F +L L L ++DN L + F + S + L L NN +T L +
Sbjct: 102 HNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSL---ILLVLMNNVLTRLPD 158
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
Q + LDL N I + N +L L + N+I HL+ F L L+
Sbjct: 159 KPLCQHMPRLHWLDLEGNHIHNLR-NLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLD 217
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N I + F + L ++LS+N I + QF + KL+ L++ + ++
Sbjct: 218 ELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNI 277
Query: 552 PRDVF 556
+ +F
Sbjct: 278 QQRMF 282
Score = 198 (74.8 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 76/279 (27%), Positives = 129/279 (46%)
Query: 241 QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
Q LE+ N P N +L+W N I+ + N L + L+ NK
Sbjct: 26 QGLELDCDETNLRAVPSVSSNVTAMSLQW-----NLIRKLPPDCFKNYHDLQKLYLQNNK 80
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
I+ I +++ F L ++ LS+N + ++ F +L L + + N L I +F
Sbjct: 81 ITSI--SIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFY 138
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFV-NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL 419
LN+++ +VL N + + ++P L LDL+ N + NL + I+ + L
Sbjct: 139 GLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIH--NLRNLTFISCSNLTV-L 195
Query: 420 NLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
+ N I +L EN AP+ + LDL +N+I+ +P + + L +L L +N I+
Sbjct: 196 VMRKNKINHLNENTF--APLQKLDELDLGSNKIENLPPLIFKDLKE-LSQLNLSYNPIQK 252
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
+ A F L L+ LSLE I+ + +R F + NL I
Sbjct: 253 IQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 291
Score = 182 (69.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 55/192 (28%), Positives = 96/192 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT L +F L+ L+ L + N L ++ F L LL + ++ P
Sbjct: 103 NRITFLKPGVFEDLHRLEWLIIEDNHLS--RISPPTFYGLNSLILLVLMNNVLT--RLPD 158
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L +++ L WL ++ N+I N+RN + + ++L + + NKI+ ++ N F + K L
Sbjct: 159 KPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFA-PLQK-L 216
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
E+ L +N +E + F +LKEL+ + LSYN ++ I+ F L + ++ L +I
Sbjct: 217 DELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISN 276
Query: 378 IYPNAFVNLPNL 389
I F L NL
Sbjct: 277 IQQRMFRPLMNL 288
Score = 172 (65.6 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 74/279 (26%), Positives = 130/279 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L D N++ + + S N+T+++ L++N I K+ + F N H L+++ L NN +
Sbjct: 30 LDCDETNLRAVPSVSS-NVTAMS---LQWNLIRKLPPDCFK-NYHD-LQKLYLQNNKITS 83
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
I F L L + LS+N + +K F++L+ + +++ N + I P F L +L
Sbjct: 84 ISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSL 143
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
+ L L +N L + ++ L+L N+I NL N + + L +
Sbjct: 144 ILLVLMNNVLTRLP---DKPLCQHMPRLHWLDLEGNHIHNL-RNLTFISCSNLTVLVMRK 199
Query: 449 NRIQEVPVNFLQTFA--DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
N+I + N TFA L +L L N+I++L F +L L L+L +N I +
Sbjct: 200 NKINHLNEN---TFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQAN 256
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
F + L+ + L EIS + F ++N+SH
Sbjct: 257 QFDYLVKLKSLSLEGIEISNIQQRMFR-----PLMNLSH 290
Score = 170 (64.9 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 56/211 (26%), Positives = 103/211 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKIT ++ FR L +L +L LS N++ L VF+ +L+ L I + + P
Sbjct: 79 NKITSISIYAFRGLNSLTKLYLSHNRITF--LKPGVFEDLHRLEWLIIEDNHLSRISPPT 136
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSL-YNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ LN+L L + NN + + + L ++ L++++LE N I + N F
Sbjct: 137 FY---GLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRN--LTFISCSN 191
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L + + N + + +TF L++L+ + L N ++++ FK+L + + LS+N I+
Sbjct: 192 LTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQ 251
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
I N F L L L L+ ++ + +F
Sbjct: 252 KIQANQFDYLVKLKSLSLEGIEISNIQQRMF 282
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 56/234 (23%), Positives = 112/234 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I L + F++ ++LQ+L L NK+ I + + F L L +S N F
Sbjct: 55 NLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYA--FRGLNSLTKLYLSH---NRITFLK 109
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ ++L+ LEWL +++N++ I + Y L SL + L N ++++ + ++ RL
Sbjct: 110 PGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHM-PRL 168
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L N++ + + TF + L + + N + + +F L + + L N+I+
Sbjct: 169 HWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIEN 228
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
+ P F +L L +L+L N ++ N F + ++ L+L I+N+ +
Sbjct: 229 LPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKS---LSLEGIEISNIQQ 279
Score = 159 (61.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 60/210 (28%), Positives = 103/210 (49%)
Query: 363 NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+N+ + L +N I+ + P+ F N +L KL LQ+NK+ ++ F + S L LS
Sbjct: 45 SNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLT---KLYLS 101
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHL-D 480
+N IT L + ++ L + +N + + P F +SL L L N + L D
Sbjct: 102 HNRITFLKPGVFEDLH-RLEWLIIEDNHLSRISPPTFYGL--NSLILLVLMNNVLTRLPD 158
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
++ L L LE N+I + TFI NL ++ + N+I+ L F KL
Sbjct: 159 KPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDE 218
Query: 541 LNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
L++ N++ +LP +F + + +L++SYN
Sbjct: 219 LDLGSNKIENLPPLIFKDLKELSQLNLSYN 248
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 216 (81.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 73/261 (27%), Positives = 128/261 (49%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI + + L N L L+ F +L +L + L +N + ++ +F+ L + ++LS
Sbjct: 54 NISLGCQGLSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILS 113
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I + F +PNL LDL N+++D F + Q NL+L +N I ++
Sbjct: 114 SNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQ---NLHLRSNNIRSIPV 170
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR--KLYLDFNEIKHLDATAFGNLDV 489
+ ++ LDL NR++ + TF LR +L+L+ N+ ++ F L
Sbjct: 171 RTFMECRS-LEFLDLGYNRLRTITRT---TFLGLLRLTELHLEHNQFSRINFFLFPRLLN 226
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
L+ L L+ N I VV+ + LQ +DLS NEI +L F L LN+ N++
Sbjct: 227 LQALYLQWNRIRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKIS 286
Query: 550 SLPRDVFSNTI-IEKLDISYN 569
++ +V S+ I I ++++ N
Sbjct: 287 NVSLEVVSSWISISTINLAGN 307
Score = 207 (77.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 66/227 (29%), Positives = 115/227 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I+ ++ F+ L L+EL LS NK I +L + F+ L+ L++S++ + P
Sbjct: 91 NSISTVDRLAFQGLRRLKELILSSNK--IAQLQNGTFETVPNLRNLDLSYNQMQ-DLVPG 147
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L L+ L + +NNI++I + SL +++L YN++ I F + RL
Sbjct: 148 HF--HGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLL--RL 203
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
E+ L +N I F L L + L +N ++++ S + + + LS N+I+
Sbjct: 204 TELHLEHNQFSRINFFLFPRLLNLQALYLQWNRIRTVVQGSPWTWHTLQKLDLSGNEIQI 263
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+ P F LPNL L+L+ NK+ + +L V S+ S T +NL+ N
Sbjct: 264 LDPAIFRCLPNLHTLNLESNKISNVSLEVVSSWISIST---INLAGN 307
Score = 204 (76.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 70/253 (27%), Positives = 123/253 (48%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L++ N++ + Y +L L ++ L++N IS + F + +RLKE+ LS+N +
Sbjct: 62 LSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQ-GL-RRLKELILSSNKIAQ 119
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+++ TF + L + LSYN ++ + F L + N+ L N I+ I F+ +L
Sbjct: 120 LQNGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSL 179
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
LDL N+L+ F + + T ++L + N + + + +++L L N
Sbjct: 180 EFLDLGYNRLRTITRTTFLGLL-RLTELHLEHNQFSRINFFLFPRL---LNLQALYLQWN 235
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
RI+ V T+ +L+KL L NEI+ LD F L L L+LE N I+ V
Sbjct: 236 RIRTVVQGSPWTW-HTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKISNVSLEVVS 294
Query: 510 GMPNLQIIDLSFN 522
++ I+L+ N
Sbjct: 295 SWISISTINLAGN 307
Score = 194 (73.4 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 71/278 (25%), Positives = 127/278 (45%)
Query: 225 QIIELNSNVF-DVFEKLQLLEISFSL-FNSNEF--PYYILNKNLNTLEWLAMDNNNIKNI 280
+I+ S F DV E + L SL +NS PY + LN L WL +D+N+I +
Sbjct: 39 KIVYCESGGFQDVPENISLGCQGLSLRYNSLLLLLPYQFAH--LNQLVWLYLDHNSISTV 96
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKE 340
+ L L + L NKI+++ N F + L+ + LS N ++ + F+ L++
Sbjct: 97 DRLAFQGLRRLKELILSSNKIAQLQNGTFE-TV-PNLRNLDLSYNQMQDLVPGHFHGLRK 154
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
L + L N ++SI +F ++ + L +N+++ I F+ L L +L L+ N+
Sbjct: 155 LQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFS 214
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQ 460
N +F + + Q L L N I + + ++ LDLS N IQ + +
Sbjct: 215 RINFFLFPRLLNLQA---LYLQWNRIRTVVQGSPWTWHT-LQKLDLSGNEIQILDPAIFR 270
Query: 461 TFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+ L L L+ N+I ++ + + ++L N
Sbjct: 271 CLPN-LHTLNLESNKISNVSLEVVSSWISISTINLAGN 307
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/124 (35%), Positives = 66/124 (53%)
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
N+ + +P F + L LYLD N I +D AF L L+ L L N IA + T
Sbjct: 67 NSLLLLLPYQFAHL--NQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGT 124
Query: 508 FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIEKLDI 566
F +PNL+ +DLS+N++ L F+ KL+ L++ N +RS+P F +E LD+
Sbjct: 125 FETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDL 184
Query: 567 SYNQ 570
YN+
Sbjct: 185 GYNR 188
>UNIPROTKB|G3V6F8 [details] [associations]
symbol:Tlr5 "Protein Tlr5" species:10116 "Rattus
norvegicus" [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005149
"interleukin-1 receptor binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0034123
"positive regulation of toll-like receptor signaling pathway"
evidence=IEA] [GO:0034146 "toll-like receptor 5 signaling pathway"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027176 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:631351 GO:GO:0016021 GO:GO:0007165
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 GeneTree:ENSGT00700000104185 EMBL:CH473985
SUPFAM:SSF52200 CTD:7100 KO:K10168 PANTHER:PTHR24365:SF7
RefSeq:NP_001139300.1 UniGene:Rn.198962 Ensembl:ENSRNOT00000004821
GeneID:289337 KEGG:rno:289337 NextBio:629661 Uniprot:G3V6F8
Length = 871
Score = 203 (76.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 88/316 (27%), Positives = 154/316 (48%)
Query: 276 NIKNIRNYSLYNL--TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
NIK+ + +L +S+ ++L + I ++ LF K LK++ L+ N + I
Sbjct: 285 NIKDPDQSTFASLARSSVLQLDLSHGYIFSLNPRLFE--TLKDLKKLNLAFNKINKISDY 342
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
F+ L L + LSYNLL + ++F L ++ + L N I I F L L LD
Sbjct: 343 AFHGLDSLQILNLSYNLLGELYNSNFYGLPSIAYLDLQRNHIGIIQDRTFRLLKKLQTLD 402
Query: 394 LQDNKLKDFNL--NVFSNI--TSKQTPM-NLNLSNNYITNLYENDKKQ-APIY------- 440
L+DN LK +V + ++K T + ++ + N+I L EN + + +Y
Sbjct: 403 LRDNALKTIGFIPSVQMVLLGSNKLTHLPHVRFTANFI-ELSENGLENLSDLYFLLRIPG 461
Query: 441 IKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATA-----FGNLDVLELLS 494
++ L L+ NR+ V++ + SL +L+L N ++ T F L L++L
Sbjct: 462 LQFLILNQNRLSSCSNVDYAPSQNLSLEQLFLAENMLQLAWETGLCWDIFKGLSRLQILY 521
Query: 495 LEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRD 554
L +N + + F G+ L+++ LS N ++ML+ L IL+IS N+L S
Sbjct: 522 LNNNYLNFLPPGIFNGLVALRMLSLSANRLTMLSPGSL--PANLEILDISRNQLFSPDPG 579
Query: 555 VFSNTIIEKLDISYNQ 570
+FS+ + LDI++N+
Sbjct: 580 LFSS--LRALDITHNE 593
Score = 195 (73.7 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 89/345 (25%), Positives = 167/345 (48%)
Query: 212 YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS---LFNSNEFPYYILNKNLNTLE 268
Y++ F ++ + + + F + +L++ S +F+ N + L K+L L
Sbjct: 274 YHIMGSGFGFQNIK--DPDQSTFASLARSSVLQLDLSHGYIFSLNPRLFETL-KDLKKLN 330
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
LA N I I +Y+ + L SL +NL YN + +++N+ F + + + + L N++
Sbjct: 331 -LAF--NKINKISDYAFHGLDSLQILNLSYNLLGELYNSNF-YGLPS-IAYLDLQRNHIG 385
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
+I+ TF LK+L T+ L N LK+I F + ++ ++L N++ ++ F N
Sbjct: 386 IIQDRTFRLLKKLQTLDLRDNALKTI---GF--IPSVQMVLLGSNKLTHLPHVRFT--AN 438
Query: 389 LVKLDLQDNKLKDFN-LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP-IYIKSLDL 446
+ +L +N L++ + L I Q L L+ N +++ D + + ++ L L
Sbjct: 439 FI--ELSENGLENLSDLYFLLRIPGLQF---LILNQNRLSSCSNVDYAPSQNLSLEQLFL 493
Query: 447 SNNRIQEVPVNFL--QTFA--DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
+ N +Q L F L+ LYL+ N + L F L L +LSL N + +
Sbjct: 494 AENMLQLAWETGLCWDIFKGLSRLQILYLNNNYLNFLPPGIFNGLVALRMLSLSANRLTM 553
Query: 503 VVKRTFIGMP-NLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
+ + +P NL+I+D+S N++ + + FS LR L+I+HN
Sbjct: 554 LSPGS---LPANLEILDISRNQL--FSPDPGLFS-SLRALDITHN 592
Score = 171 (65.3 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 89/360 (24%), Positives = 171/360 (47%)
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
FR+L NL+ L L +++++ LN + F L L + F SN +NLN+L
Sbjct: 103 FRNLPNLRILDLGQSQIEV--LNPDAFQGLPHLFELRL-FDCGLSNAVLRDAYFRNLNSL 159
Query: 268 EWLAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L + N I ++ +S + L+SL+ IN +N+I + + + L L +
Sbjct: 160 ARLDLSANEIHSLHLHSSFQELSSLSDINFSFNRIFTLCEDELQPLQGRTLSFFGLKSTS 219
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFK-NLNNMLNIVL-SFNQ-IKYIYPNAF 383
L S F + + N L+ I+ + + N +L +F+ I+ + ++
Sbjct: 220 LF---SRVFVDWEACR------NPLRGIRLETLDLSENGWTAAILGNFSHTIQGSHISSL 270
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IK 442
+ +++ +KD + + F+++ ++ + + L+LS+ YI +L N + + +K
Sbjct: 271 ILTYHIMGSGFGFQNIKDPDQSTFASL-ARSSVLQLDLSHGYIFSL--NPRLFETLKDLK 327
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
L+L+ N+I ++ ++ DSL+ L L +N + L + F L + L L+ N+I +
Sbjct: 328 KLNLAFNKINKIS-DYAFHGLDSLQILNLSYNLLGELYNSNFYGLPSIAYLDLQRNHIGI 386
Query: 503 VVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIE 562
+ RTF + LQ +DL N + + G F S ++ +L N+L LP F+ IE
Sbjct: 387 IQDRTFRLLKKLQTLDLRDNALKTI-G--FIPSVQMVLLG--SNKLTHLPHVRFTANFIE 441
Score = 150 (57.9 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 79/301 (26%), Positives = 137/301 (45%)
Query: 200 ITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL----FNSNEF 255
I LN LF L +L++L+L+FNK+ +++ F + LQ+L +S++L +NSN
Sbjct: 312 IFSLNPRLFETLKDLKKLNLAFNKIN--KISDYAFHGLDSLQILNLSYNLLGELYNSN-- 367
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK------ISKIHNNLF 309
+Y L ++ +L + N+I I++ + L L ++L N I + L
Sbjct: 368 -FY----GLPSIAYLDLQRNHIGIIQDRTFRLLKKLQTLDLRDNALKTIGFIPSVQMVLL 422
Query: 310 HFNIHKRLKEIRLSNNYLELIE------SDTFYNLK--ELNTITLSYNLLKSIKTTSFKN 361
N L +R + N++EL E SD ++ L+ L + L+ N L S +
Sbjct: 423 GSNKLTHLPHVRFTANFIELSENGLENLSDLYFLLRIPGLQFLILNQNRLSSCSNVDYAP 482
Query: 362 LNNML--NIVLSFNQIKYIYPNA-----FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
N+ + L+ N ++ + F L L L L +N L +F+ + + +
Sbjct: 483 SQNLSLEQLFLAENMLQLAWETGLCWDIFKGLSRLQILYLNNNYLNFLPPGIFNGLVALR 542
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
L+LS N +T L P ++ LD+S N++ P L F+ SLR L + N
Sbjct: 543 M---LSLSANRLTMLSPGS---LPANLEILDISRNQLFS-PDPGL--FS-SLRALDITHN 592
Query: 475 E 475
E
Sbjct: 593 E 593
Score = 122 (48.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 95/393 (24%), Positives = 168/393 (42%)
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLL-EISFSLFNSNEFPYYILNKNLNT 266
FR+L +L L LS N++ + L+S+ F++L L +I+FS FN + + L
Sbjct: 153 FRNLNSLARLDLSANEIHSLHLHSS----FQELSSLSDINFS-FNRI---FTLCEDELQP 204
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNY 326
L+ + +K+ SL++ +++ N + I L ++ + + N+
Sbjct: 205 LQGRTLSFFGLKST---SLFSRVFVDWEACR-NPLRGIR--LETLDLSENGWTAAILGNF 258
Query: 327 LELIESDTFYNLKELNTITLS---YNLLKSIKTTSFKNL--NNMLNIVLSFNQIKYIYPN 381
I+ +L I S + +K ++F +L +++L + LS I + P
Sbjct: 259 SHTIQGSHISSLILTYHIMGSGFGFQNIKDPDQSTFASLARSSVLQLDLSHGYIFSLNPR 318
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F L +L KL+L NK+ + F + S Q LNLS N + LY ++ P I
Sbjct: 319 LFETLKDLKKLNLAFNKINKISDYAFHGLDSLQI---LNLSYNLLGELYNSNFYGLPS-I 374
Query: 442 KSLDLSNNRI--------------QEVPV--NFLQT--FADSLRKLYLDFNEIKHLDATA 483
LDL N I Q + + N L+T F S++ + L N++ HL
Sbjct: 375 AYLDLQRNHIGIIQDRTFRLLKKLQTLDLRDNALKTIGFIPSVQMVLLGSNKLTHLPHVR 434
Query: 484 FGNLDVLELLSLEHNNIAVVVKRTFI-GMPNLQIIDLSFNEISMLTGEQFYFSFKLRI-- 540
F + L N + + F+ +P LQ + L+ N +S + + S L +
Sbjct: 435 F----TANFIELSENGLENLSDLYFLLRIPGLQFLILNQNRLSSCSNVDYAPSQNLSLEQ 490
Query: 541 LNISHNRLR-----SLPRDVFSNTIIEKLDISY 568
L ++ N L+ L D+F + +L I Y
Sbjct: 491 LFLAENMLQLAWETGLCWDIFKG--LSRLQILY 521
Score = 107 (42.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 64/262 (24%), Positives = 114/262 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKI ++ F L +LQ L+LS+N L + NSN + + + L++ + +
Sbjct: 334 NKINKISDYAFHGLDSLQILNLSYNLLGEL-YNSNFYGL-PSIAYLDLQRNHIGIIQDRT 391
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L K L TL+ + +N +K I + + S+ + L NK++ + + F N
Sbjct: 392 FRLLKKLQTLD---LRDNALKTI-GF----IPSVQMVLLGSNKLTHLPHVRFTANF---- 439
Query: 318 KEIRLSNNYLELIESDTFY-NLKELNTITLSYNLLKSIKTTSFKNLNNML--NIVLSFNQ 374
I LS N LE + F + L + L+ N L S + N+ + L+ N
Sbjct: 440 --IELSENGLENLSDLYFLLRIPGLQFLILNQNRLSSCSNVDYAPSQNLSLEQLFLAENM 497
Query: 375 IKYIYPNA-----FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
++ + F L L L L +N L +F+ + + + L+LS N +T L
Sbjct: 498 LQLAWETGLCWDIFKGLSRLQILYLNNNYLNFLPPGIFNGLVALRM---LSLSANRLTML 554
Query: 430 YENDKKQAPIYIKSLDLSNNRI 451
P ++ LD+S N++
Sbjct: 555 SPGS---LPANLEILDISRNQL 573
Score = 67 (28.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 28/126 (22%), Positives = 58/126 (46%)
Query: 5 LSHNKLSVLNMATLYSNVTKLQ--HLGTTILKGDQLQGIFNS--KLRELEITGKDLKFID 60
LS N +S + + T + + +L LGT + Q F + LR L++ ++ ++
Sbjct: 65 LSFNYISTV-VTTSFPLLEQLLLLELGTQYARLTIGQEAFRNLPNLRILDLGQSQIEVLN 123
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNV 120
P AF + ++L L L F + ++ + LDLS N++ L++ + + +
Sbjct: 124 PDAFQGLPHLFELRLFDCGLSNAVLRDAYFRNLNSLAR--LDLSANEIHSLHLHSSFQEL 181
Query: 121 TKLQHL 126
+ L +
Sbjct: 182 SSLSDI 187
Score = 53 (23.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 25/111 (22%), Positives = 54/111 (48%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDP 61
TLDLS N + + +S+ + H+ + IL + F + ++K D
Sbjct: 242 TLDLSENGWTAAILGN-FSHTIQGSHISSLILTYHIMGSGFGFQ---------NIKDPDQ 291
Query: 62 SAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLN 112
S F ++ L L +++ I L LF+ ++++++ L+L+ NK++ ++
Sbjct: 292 STFASLARSSVLQLDLSHGYIFSLNPRLFETLKDLKK--LNLAFNKINKIS 340
>UNIPROTKB|A4D1F6 [details] [associations]
symbol:LRRD1 "Leucine-rich repeat and death
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] Pfam:PF00560
InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:CH236949 Gene3D:1.10.533.10 InterPro:IPR011029
EMBL:AC000120 InterPro:IPR025875 Pfam:PF12799 EMBL:BC026112
EMBL:BC144674 EMBL:BC144678 IPI:IPI00887636 IPI:IPI00935774
RefSeq:NP_001155000.1 UniGene:Hs.671729 ProteinModelPortal:A4D1F6
SMR:A4D1F6 PhosphoSite:A4D1F6 PRIDE:A4D1F6 Ensembl:ENST00000343318
Ensembl:ENST00000430130 Ensembl:ENST00000458448 GeneID:401387
KEGG:hsa:401387 UCSC:uc011khp.1 CTD:401387 GeneCards:GC07M091743
HGNC:HGNC:34300 neXtProt:NX_A4D1F6 HOVERGEN:HBG108705
InParanoid:A4D1F6 OMA:CNKFETF OrthoDB:EOG4K6G5V GenomeRNAi:401387
NextBio:106780 ArrayExpress:A4D1F6 Bgee:A4D1F6
Genevestigator:A4D1F6 Uniprot:A4D1F6
Length = 860
Score = 221 (82.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 95/373 (25%), Positives = 172/373 (46%)
Query: 202 DLNGNLFRHL-YNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYIL 260
DL GNL L ++EL + L +++ N F E QLL+I N+ I
Sbjct: 309 DLTGNLISSLPKEIRELK-NLETL-LMDHNKLTFLAVEIFQLLKIKELQLADNKLEV-IS 365
Query: 261 NK--NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
+K N L L +D N +KNI + L ++L NK++++ + N L+
Sbjct: 366 HKIENFRELRILILDKNLLKNIPE-KISCCAMLECLSLSDNKLTELPKYIHKLN---NLR 421
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
++ ++ N + I +D +L + ++ S N++ + KN ++ I LS+N+I Y
Sbjct: 422 KLHVNRNNMVKI-TDCISHLNNICSLEFSGNIITDVPI-EIKNCQKIIKIELSYNKIMY- 478
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
+P L +L L + N + + +++ SKQ ++L LS N + L ++ +
Sbjct: 479 FPLGLCALDSLYYLSVNGNYISEIPVDISF---SKQL-LHLELSENKL--LIFSEHFCSL 532
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
I +K LDL N+I+++P + SL L L N+ + L+ L++L L N
Sbjct: 533 INLKYLDLGKNQIKKIPASISNMI--SLHVLILCCNKFETFPRELC-TLENLQVLDLSEN 589
Query: 499 NIAVVVKRTFIGMPNLQIIDLSFNEISMLTGE--QFYFSFKLRILNISHNRLRSLPRDVF 556
+ + + +Q ++ S N+ E Q +L I I +L LP ++
Sbjct: 590 QLQKI-SSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELS 648
Query: 557 SNTIIEKLDISYN 569
+ T +++LDIS N
Sbjct: 649 NMTQLKELDISNN 661
Score = 189 (71.6 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 101/379 (26%), Positives = 180/379 (47%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L NL+ LSL NKL+ I + + L++L + ++ + FP + L L L
Sbjct: 256 LGNLEILSLGKNKLRHIP---DTLPSLKTLRVLNLEYNQLTT--FPKALCF--LPKLISL 308
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
+ N I ++ + L +L + +++NK++ + +F ++KE++L++N LE+I
Sbjct: 309 DLTGNLISSLPK-EIRELKNLETLLMDHNKLTFLAVEIFQL---LKIKELQLADNKLEVI 364
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQI----KYIYP----- 380
S N +EL + L NLLK+I + ML + LS N++ KYI+
Sbjct: 365 -SHKIENFRELRILILDKNLLKNIPEKI--SCCAMLECLSLSDNKLTELPKYIHKLNNLR 421
Query: 381 NAFVNLPNLVKLDLQDNKLKDF-NLNVFSNITSKQTPMNLNLSNNYIT-NLYENDKKQAP 438
VN N+VK+ + L + +L NI + P+ + I L N P
Sbjct: 422 KLHVNRNNMVKITDCISHLNNICSLEFSGNIIT-DVPIEIKNCQKIIKIELSYNKIMYFP 480
Query: 439 IYIKSLD------LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATA-FGNLDVLE 491
+ + +LD ++ N I E+PV+ +F+ L L+L+ +E K L + F +L L+
Sbjct: 481 LGLCALDSLYYLSVNGNYISEIPVDI--SFSKQL--LHLELSENKLLIFSEHFCSLINLK 536
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N I + + M +L ++ L N+ E L++L++S N+L+ +
Sbjct: 537 YLDLGKNQIKKI-PASISNMISLHVLILCCNKFETFPRELCTLE-NLQVLDLSENQLQKI 594
Query: 552 PRDVFSNTIIEKLDISYNQ 570
D+ + I+KL+ S NQ
Sbjct: 595 SSDICNLKGIQKLNFSSNQ 613
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 94/369 (25%), Positives = 165/369 (44%)
Query: 216 ELSLSFNKLQIIELNSNVFDVFEK--LQLLEISFSLFNSN---EFPYYILNKNLNTLEWL 270
E+ L N L+I+ ++ N K QL I F +N FP + + L LE L
Sbjct: 206 EIQLLHN-LRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDL--ECLGNLEIL 262
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
++ N +++I + +L +L +L +NLEYN+++ L +L + L+ N + +
Sbjct: 263 SLGKNKLRHIPD-TLPSLKTLRVLNLEYNQLTTFPKALCFL---PKLISLDLTGNLISSL 318
Query: 331 ESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLV 390
+ LK L T+ + +N L + F+ L + + L+ N+++ I + N L
Sbjct: 319 PKE-IRELKNLETLLMDHNKLTFLAVEIFQLLK-IKELQLADNKLEVI-SHKIENFRELR 375
Query: 391 KLDLQDNKLKDFN--------LNVFSNITSKQT--PMNLNLSNNYITNLYENDKKQAPIY 440
L L N LK+ L S +K T P ++ NN + L+ N I
Sbjct: 376 ILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNN-LRKLHVNRNNMVKIT 434
Query: 441 --------IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLEL 492
I SL+ S N I +VP+ + K+ L +N+I + LD L
Sbjct: 435 DCISHLNNICSLEFSGNIITDVPIEIKN--CQKIIKIELSYNKIMYFPLGLCA-LDSLYY 491
Query: 493 LSLEHNNIAVV-VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
LS+ N I+ + V +F L ++LS N++ ++ E F L+ L++ N+++ +
Sbjct: 492 LSVNGNYISEIPVDISF--SKQLLHLELSENKL-LIFSEHFCSLINLKYLDLGKNQIKKI 548
Query: 552 PRDVFSNTI 560
P + SN I
Sbjct: 549 PASI-SNMI 556
Score = 163 (62.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 78/335 (23%), Positives = 160/335 (47%)
Query: 254 EFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNI 313
EFP IL + +++L +D N IK + +L L ++L+ N +S + + + +
Sbjct: 155 EFPKDILK--IKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLPSEI---QL 209
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
L+ + +S+N++ I + L + + N +++ + + L N+ + L N
Sbjct: 210 LHNLRILNVSHNHISHIPKE-ISQLGNIRQLFFYNNYIENFPS-DLECLGNLEILSLGKN 267
Query: 374 QIKYIYPNAFVNLPNLVKLDLQDNKLKDF-----------NLNVFSNITSKQTPMNLNLS 422
++++I P+ +L L L+L+ N+L F +L++ N+ S P +
Sbjct: 268 KLRHI-PDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISS-LPKEIREL 325
Query: 423 NNYITNLYENDKKQ---APIY----IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
N T L +++K I+ IK L L++N++ EV + ++ F + LR L LD N
Sbjct: 326 KNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKL-EVISHKIENFRE-LRILILDKNL 383
Query: 476 IKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFS 535
+K++ +LE LSL N + + K + NL+ + ++ N + +T + +
Sbjct: 384 LKNIPEK-ISCCAMLECLSLSDNKLTELPKYIH-KLNNLRKLHVNRNNMVKITDCISHLN 441
Query: 536 FKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+ L S N + +P ++ + I K+++SYN+
Sbjct: 442 -NICSLEFSGNIITDVPIEIKNCQKIIKIELSYNK 475
Score = 144 (55.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 92/398 (23%), Positives = 163/398 (40%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I G L L+ LSL N L L S + + L++L +S + + + P
Sbjct: 174 NQIKTFQGADSGDLLGLEILSLQENGLS--SLPSEI-QLLHNLRILNVSHN--HISHIPK 228
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
I L + L NN I+N + L L +L ++L NK+ I + L K L
Sbjct: 229 EI--SQLGNIRQLFFYNNYIENFPS-DLECLGNLEILSLGKNKLRHIPDTLPSL---KTL 282
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L N L + L +L ++ L+ NL+ S+ + L N+ +++ N++ +
Sbjct: 283 RVLNLEYNQLTTFPKALCF-LPKLISLDLTGNLISSLPK-EIRELKNLETLLMDHNKLTF 340
Query: 378 IYPNAFVNLPNLVKLDLQDNKL----------KDFNLNVFSNITSKQTPMNLNLSNNY-I 426
+ F L + +L L DNKL ++ + + K P ++
Sbjct: 341 LAVEIF-QLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLEC 399
Query: 427 TNLYENDKKQAPIYIKSLD----LSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDAT 482
+L +N + P YI L+ L NR V + + +++ L N I +
Sbjct: 400 LSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKITDCISHLNNICSLEFSGNIITDVPIE 459
Query: 483 AFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILN 542
N + + L +N I + + +L + ++ N IS + + FS +L L
Sbjct: 460 -IKNCQKIIKIELSYNKI-MYFPLGLCALDSLYYLSVNGNYISEIPVD-ISFSKQLLHLE 516
Query: 543 ISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGRESN 580
+S N+L S ++ LD+ NQ K P SN
Sbjct: 517 LSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISN 554
Score = 144 (55.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 120/514 (23%), Positives = 223/514 (43%)
Query: 14 NMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDL 73
N+ L KL+H+ T+ L+ + N + +L K L F+ P +
Sbjct: 258 NLEILSLGKNKLRHIPDTLPSLKTLR-VLNLEYNQLTTFPKALCFL-PKL---------I 306
Query: 74 TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKD 133
+L +T I LP + + ++N+E + +D HNKL+ L A + K++ L L D
Sbjct: 307 SLDLTGNLISSLPKEIRE-LKNLETLLMD--HNKLTFL--AVEIFQLLKIKELQ---LAD 358
Query: 134 REKXXXXXXXXXXRCNKITDLNGNLFRHLQKSI-----VKAKKNNNNNEDQVSDR-EKXX 187
+ R +I L+ NL +++ + I ++ ++N ++ K
Sbjct: 359 NKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLN 418
Query: 188 XXXXXXXXRCN--KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
R N KITD HL N+ L S N + + + +K+ +E+
Sbjct: 419 NLRKLHVNRNNMVKITDC----ISHLNNICSLEFSGNIITDVPIE---IKNCQKIIKIEL 471
Query: 246 SFSLFNSNEFPYYILNK-NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK--IS 302
S+ N+ Y+ L L++L +L+++ N I I ++ L ++ L NK I
Sbjct: 472 SY-----NKIMYFPLGLCALDSLYYLSVNGNYISEIPVDISFS-KQLLHLELSENKLLIF 525
Query: 303 KIHN----NLFHFNIHK-RLKEIRLS-NNYLELI-------ESDTF----YNLKELNTIT 345
H NL + ++ K ++K+I S +N + L + +TF L+ L +
Sbjct: 526 SEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLD 585
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N L+ I ++ NL + + S NQ + +P L +L +L++ +++K L
Sbjct: 586 LSENQLQKI-SSDICNLKGIQKLNFSSNQFIH-FPIELCQLQSLEQLNI--SQIKGRKLT 641
Query: 406 VFSNITSKQTPMN-LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD 464
S T + L++SNN I + N + + SL NN+I +P + L +
Sbjct: 642 RLPGELSNMTQLKELDISNNAIREIPRNIGELRNLV--SLHAYNNQISYLPPSLLSL--N 697
Query: 465 SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
L++L L N + L + + N+ L+ ++ + N
Sbjct: 698 DLQQLNLSGNNLTALPSAIY-NIFSLKEINFDDN 730
Score = 141 (54.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 77/347 (22%), Positives = 159/347 (45%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVF-DVFEKLQLLEISFSL-FNSN 253
+ N + L+ N ++ + + N + +E + N+ DV +++ + + + N
Sbjct: 416 KLNNLRKLHVNR-NNMVKITDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYN 474
Query: 254 EFPYYILNK-NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFN 312
+ Y+ L L++L +L+++ N I I ++ L ++ L NK+ I + HF
Sbjct: 475 KIMYFPLGLCALDSLYYLSVNGNYISEIPVDISFS-KQLLHLELSENKLL-IFSE--HFC 530
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
LK + L N ++ I + + N+ L+ + L N ++ L N+ + LS
Sbjct: 531 SLINLKYLDLGKNQIKKIPA-SISNMISLHVLILCCNKFETFPR-ELCTLENLQVLDLSE 588
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN-LSNNYITNLYE 431
NQ++ I + NL + KL+ N+ F + + + +Q +N++ + +T L
Sbjct: 589 NQLQKISSD-ICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQ--LNISQIKGRKLTRLPG 645
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+ K LD+SNN I+E+P N + +L L+ N+I +L + +L+ L+
Sbjct: 646 ELSNMTQL--KELDISNNAIREIPRNIGEL--RNLVSLHAYNNQISYLPPSLL-SLNDLQ 700
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE-----ISMLTGEQFY 533
L+L NN+ + + + +L+ I+ N + + G+Q Y
Sbjct: 701 QLNLSGNNLTALPSAIY-NIFSLKEINFDDNPLLRPPVEICKGKQLY 746
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 60/231 (25%), Positives = 106/231 (45%)
Query: 360 KNLNNMLNIVLSFNQIKYIY--PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK-QTP 416
K L +L +KY+Y N DL ++ N S++ S+ Q
Sbjct: 151 KGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLPSEIQLL 210
Query: 417 MNL---NLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
NL N+S+N+I+++ + + I + L NN I+ P + L+ + L L L
Sbjct: 211 HNLRILNVSHNHISHIPKEISQLGNI--RQLFFYNNYIENFPSD-LECLGN-LEILSLGK 266
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N+++H+ T +L L +L+LE+N + K +P L +DL+ N IS L E
Sbjct: 267 NKLRHIPDT-LPSLKTLRVLNLEYNQLTTFPKALCF-LPKLISLDLTGNLISSLPKEIRE 324
Query: 534 FSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGRESNPRPI 584
L L + HN+L L ++F I++L ++ N+ ++ + N R +
Sbjct: 325 LK-NLETLLMDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFREL 374
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 32/132 (24%), Positives = 64/132 (48%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS--KLRELEITGKDLKFI 59
TL + HNKL+ L A + K++ L L ++L+ I + REL I D +
Sbjct: 330 TLLMDHNKLTFL--AVEIFQLLKIKELQ---LADNKLEVISHKIENFRELRILILDKNLL 384
Query: 60 DPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS 118
+ + I C L L +++ ++ ELP + K+ N+ ++ ++ +N + + + + +
Sbjct: 385 K-NIPEKISCCAMLECLSLSDNKLTELPKYIH-KLNNLRKLHVN-RNNMVKITDCISHLN 441
Query: 119 NVTKLQHLGTTI 130
N+ L+ G I
Sbjct: 442 NICSLEFSGNII 453
>UNIPROTKB|Q9HBX9 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007188
"adenylate cyclase-modulating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007567 "parturition" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0042562
"hormone binding" evidence=IEA] [GO:0060427 "lung connective tissue
development" evidence=IEA] [GO:0060658 "nipple morphogenesis"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0030154 GO:GO:0046872
GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 EMBL:CH471056
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 EMBL:AF190500 EMBL:AY899848 EMBL:AY899849
EMBL:AY899850 EMBL:AK300379 EMBL:BC112142 EMBL:BC113617
IPI:IPI00012456 IPI:IPI00219888 IPI:IPI00654878 IPI:IPI00876893
RefSeq:NP_001240657.1 RefSeq:NP_001240658.1 RefSeq:NP_067647.2
UniGene:Hs.591686 PDB:2JM4 PDBsum:2JM4 ProteinModelPortal:Q9HBX9
SMR:Q9HBX9 MINT:MINT-231156 STRING:Q9HBX9 PhosphoSite:Q9HBX9
DMDM:166209887 PRIDE:Q9HBX9 DNASU:59350 Ensembl:ENST00000307765
Ensembl:ENST00000343542 Ensembl:ENST00000423548
Ensembl:ENST00000470033 Ensembl:ENST00000471616 GeneID:59350
KEGG:hsa:59350 UCSC:uc003ipz.3 UCSC:uc010iqm.3 UCSC:uc010iqo.3
CTD:59350 GeneCards:GC04P159236 H-InvDB:HIX0024561 HGNC:HGNC:19718
HPA:HPA027067 MIM:606654 neXtProt:NX_Q9HBX9 PharmGKB:PA134868312
HOVERGEN:HBG026354 InParanoid:Q9HBX9 KO:K04306 OMA:YTLTTRP
PhylomeDB:Q9HBX9 ChEMBL:CHEMBL1293316 EvolutionaryTrace:Q9HBX9
GenomeRNAi:59350 NextBio:65261 ArrayExpress:Q9HBX9 Bgee:Q9HBX9
CleanEx:HS_RXFP1 Genevestigator:Q9HBX9 GermOnline:ENSG00000171509
GO:GO:0060658 Uniprot:Q9HBX9
Length = 757
Score = 220 (82.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 65/245 (26%), Positives = 112/245 (45%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
++ + + L N + + D F N +L + L N + SI +F+ LN++ + LS
Sbjct: 123 SVSSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLS 182
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I ++ P F +L L L ++DN L + F + S + L L NN +T L +
Sbjct: 183 HNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSL---ILLVLMNNVLTRLPD 239
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
Q + LDL N I + N +L L + N+I HL+ F L L+
Sbjct: 240 KPLCQHMPRLHWLDLEGNHIHNLR-NLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLD 298
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N I + F + L ++LS+N I + QF + KL+ L++ + ++
Sbjct: 299 ELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNI 358
Query: 552 PRDVF 556
+ +F
Sbjct: 359 QQRMF 363
Score = 198 (74.8 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 76/279 (27%), Positives = 129/279 (46%)
Query: 241 QLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
Q LE+ N P N +L+W N I+ + N L + L+ NK
Sbjct: 107 QGLELDCDETNLRAVPSVSSNVTAMSLQW-----NLIRKLPPDCFKNYHDLQKLYLQNNK 161
Query: 301 ISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFK 360
I+ I +++ F L ++ LS+N + ++ F +L L + + N L I +F
Sbjct: 162 ITSI--SIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFY 219
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFV-NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL 419
LN+++ +VL N + + ++P L LDL+ N + NL + I+ + L
Sbjct: 220 GLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIH--NLRNLTFISCSNLTV-L 276
Query: 420 NLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
+ N I +L EN AP+ + LDL +N+I+ +P + + L +L L +N I+
Sbjct: 277 VMRKNKINHLNENTF--APLQKLDELDLGSNKIENLPPLIFKDLKE-LSQLNLSYNPIQK 333
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
+ A F L L+ LSLE I+ + +R F + NL I
Sbjct: 334 IQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 372
Score = 182 (69.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 55/192 (28%), Positives = 96/192 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT L +F L+ L+ L + N L ++ F L LL + ++ P
Sbjct: 184 NRITFLKPGVFEDLHRLEWLIIEDNHLS--RISPPTFYGLNSLILLVLMNNVLT--RLPD 239
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
L +++ L WL ++ N+I N+RN + + ++L + + NKI+ ++ N F + K L
Sbjct: 240 KPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFA-PLQK-L 297
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
E+ L +N +E + F +LKEL+ + LSYN ++ I+ F L + ++ L +I
Sbjct: 298 DELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISN 357
Query: 378 IYPNAFVNLPNL 389
I F L NL
Sbjct: 358 IQQRMFRPLMNL 369
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 74/279 (26%), Positives = 130/279 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L D N++ + + S N+T+++ L++N I K+ + F N H L+++ L NN +
Sbjct: 111 LDCDETNLRAVPSVSS-NVTAMS---LQWNLIRKLPPDCFK-NYHD-LQKLYLQNNKITS 164
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
I F L L + LS+N + +K F++L+ + +++ N + I P F L +L
Sbjct: 165 ISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSL 224
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
+ L L +N L + ++ L+L N+I NL N + + L +
Sbjct: 225 ILLVLMNNVLTRLP---DKPLCQHMPRLHWLDLEGNHIHNL-RNLTFISCSNLTVLVMRK 280
Query: 449 NRIQEVPVNFLQTFA--DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
N+I + N TFA L +L L N+I++L F +L L L+L +N I +
Sbjct: 281 NKINHLNEN---TFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQAN 337
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
F + L+ + L EIS + F ++N+SH
Sbjct: 338 QFDYLVKLKSLSLEGIEISNIQQRMFR-----PLMNLSH 371
Score = 170 (64.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 56/211 (26%), Positives = 103/211 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NKIT ++ FR L +L +L LS N++ L VF+ +L+ L I + + P
Sbjct: 160 NKITSISIYAFRGLNSLTKLYLSHNRITF--LKPGVFEDLHRLEWLIIEDNHLSRISPPT 217
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSL-YNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ LN+L L + NN + + + L ++ L++++LE N I + N F
Sbjct: 218 FY---GLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRN--LTFISCSN 272
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L + + N + + +TF L++L+ + L N ++++ FK+L + + LS+N I+
Sbjct: 273 LTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQ 332
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
I N F L L L L+ ++ + +F
Sbjct: 333 KIQANQFDYLVKLKSLSLEGIEISNIQQRMF 363
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 56/234 (23%), Positives = 112/234 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N I L + F++ ++LQ+L L NK+ I + + F L L +S N F
Sbjct: 136 NLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYA--FRGLNSLTKLYLSH---NRITFLK 190
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ ++L+ LEWL +++N++ I + Y L SL + L N ++++ + ++ RL
Sbjct: 191 PGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHM-PRL 249
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L N++ + + TF + L + + N + + +F L + + L N+I+
Sbjct: 250 HWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIEN 309
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
+ P F +L L +L+L N ++ N F + ++ L+L I+N+ +
Sbjct: 310 LPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKS---LSLEGIEISNIQQ 360
Score = 159 (61.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 60/210 (28%), Positives = 103/210 (49%)
Query: 363 NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+N+ + L +N I+ + P+ F N +L KL LQ+NK+ ++ F + S L LS
Sbjct: 126 SNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLT---KLYLS 182
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHL-D 480
+N IT L + ++ L + +N + + P F +SL L L N + L D
Sbjct: 183 HNRITFLKPGVFEDLH-RLEWLIIEDNHLSRISPPTFYGL--NSLILLVLMNNVLTRLPD 239
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
++ L L LE N+I + TFI NL ++ + N+I+ L F KL
Sbjct: 240 KPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDE 299
Query: 541 LNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
L++ N++ +LP +F + + +L++SYN
Sbjct: 300 LDLGSNKIENLPPLIFKDLKELSQLNLSYN 329
>UNIPROTKB|Q6PEZ8 [details] [associations]
symbol:PODNL1 "Podocan-like protein 1" species:9606 "Homo
sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005578 InterPro:IPR003591 SMART:SM00369 EMBL:CH471106
InterPro:IPR000372 SMART:SM00013 HSSP:P07359 EMBL:AC020916
HOVERGEN:HBG059195 OrthoDB:EOG42V8FX HOGENOM:HOG000231119
EMBL:AK027100 EMBL:AK298489 EMBL:BC057786 IPI:IPI00302227
IPI:IPI00412448 RefSeq:NP_001139726.1 RefSeq:NP_001139727.1
RefSeq:NP_079101.3 UniGene:Hs.448497 ProteinModelPortal:Q6PEZ8
SMR:Q6PEZ8 PhosphoSite:Q6PEZ8 DMDM:296452863 PaxDb:Q6PEZ8
PRIDE:Q6PEZ8 Ensembl:ENST00000339560 Ensembl:ENST00000538371
Ensembl:ENST00000538517 GeneID:79883 KEGG:hsa:79883 UCSC:uc002mxr.3
CTD:79883 GeneCards:GC19M014044 HGNC:HGNC:26275 HPA:HPA042807
neXtProt:NX_Q6PEZ8 PharmGKB:PA162399855 eggNOG:NOG305076
InParanoid:Q6PEZ8 OMA:HVGPEAF PhylomeDB:Q6PEZ8 GenomeRNAi:79883
NextBio:69683 ArrayExpress:Q6PEZ8 Bgee:Q6PEZ8 CleanEx:HS_PODNL1
Genevestigator:Q6PEZ8 Uniprot:Q6PEZ8
Length = 512
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 80/272 (29%), Positives = 132/272 (48%)
Query: 287 NLT-SLNYINLEYNKISKI-HNNLFHFNIHKRLKEIRLSNNYL--ELIESDTFYNLKELN 342
N+T + +++L+ N++ ++ +N L + L+ + L NN + E + + F +L +L
Sbjct: 71 NITRAAQHLSLQNNQLQELPYNELSRLS---GLRTLNLHNNLISSEGLPDEAFESLTQLQ 127
Query: 343 TITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD 401
+ +++N L S+ F L L + L+ NQ+ I+P F P L + L +N+L +
Sbjct: 128 HLCVAHNKL-SV-APQF--LPRSLRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLSN 183
Query: 402 FNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQT 461
L + + L+LSNN ++ L P ++ L L NN I +VP L
Sbjct: 184 AGLPPDA-FRGSEAIATLSLSNNQLSYL----PPSLPPSLERLHLQNNLISKVPRGALSR 238
Query: 462 FADSLRKLYLDFNEIKH--LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN-LQIID 518
LR+LYL N++ LDAT F L LE L L HN + V G+P L I+
Sbjct: 239 -QTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPA----GLPRTLAILH 293
Query: 519 LSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
L N I + + + + LR L + HN+L S
Sbjct: 294 LGRNRIRQVEAARLHGARGLRYLLLQHNQLGS 325
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 108/437 (24%), Positives = 178/437 (40%)
Query: 148 CNKI--TDLNGNLFRHLQKSIVKAKKN---NNNNEDQVSDREKXXXXXXXXXXRCNKITD 202
C ++ D +G R +I +A ++ NN ++ E N +
Sbjct: 52 CPRVDTVDCDGLDLRVFPDNITRAAQHLSLQNNQLQELPYNELSRLSGLRTLNLHNNLIS 111
Query: 203 LNG---NLFRHLYNLQELSLSFNKL----QIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
G F L LQ L ++ NKL Q + + V D+ Q++EI F L E
Sbjct: 112 SEGLPDEAFESLTQLQHLCVAHNKLSVAPQFLPRSLRVADLAAN-QVMEI-FPL-TFGEK 168
Query: 256 P----YYILNKNLNT-------------LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEY 298
P Y+ N L+ + L++ NN + + SL SL ++L+
Sbjct: 169 PALRSVYLHNNQLSNAGLPPDAFRGSEAIATLSLSNNQLSYLPP-SLP--PSLERLHLQN 225
Query: 299 NKISKIHNNLFHFNIHKRLKEIRLSNNYL--ELIESDTFYNLKELNTITLSYNLLKSIKT 356
N ISK+ + +L+E+ L +N L +++ TF L L + LS+N L T
Sbjct: 226 NLISKVPRGAL--SRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQL----T 279
Query: 357 TSFKNLNNMLNIV-LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT 415
T L L I+ L N+I+ + L L LQ N+L L + + +
Sbjct: 280 TVPAGLPRTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLGSSGLPAGA-LRPLRG 338
Query: 416 PMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNE 475
L+L N + + P +++L L +N + + L L +L L +N
Sbjct: 339 LHTLHLYGNGLDRV----PPALPRRLRALVLPHNHVAALGARDLVA-TPGLTELNLAYNR 393
Query: 476 IK--HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN-LQIIDLSFNEISMLTGEQF 532
+ + AF L L L L N + R +G+P L+ + L N++ ML E
Sbjct: 394 LASARVHHRAFRRLRALRSLDLAGNQLT----RLPMGLPTGLRTLQLQRNQLRMLEPEPL 449
Query: 533 YFSFKLRILNISHNRLR 549
+LR L+++HNRLR
Sbjct: 450 AGLDQLRELSLAHNRLR 466
Score = 129 (50.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 83/381 (21%), Positives = 157/381 (41%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N++ +L N L L+ L+L N + L F+ +LQ L ++ + + P
Sbjct: 84 NQLQELPYNELSRLSGLRTLNLHNNLISSEGLPDEAFESLTQLQHLCVAHNKLSVA--PQ 141
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ L ++L + A N + I + +L + L N++S F + +
Sbjct: 142 F-LPRSLRVADLAA---NQVMEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAI 197
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI-- 375
+ LSNN L + +L+ L+ L NL+ + + + + L NQ+
Sbjct: 198 ATLSLSNNQLSYLPPSLPPSLERLH---LQNNLISKVPRGALSRQTQLRELYLQHNQLTD 254
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ F L +L LDL N+L + +T L+L N I + E +
Sbjct: 255 SGLDATTFSKLHSLEYLDLSHNQLTTVPAGL------PRTLAILHLGRNRIRQV-EAARL 307
Query: 436 QAPIYIKSLDLSNNRIQE--VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELL 493
++ L L +N++ +P L+ L L+L N + + L L
Sbjct: 308 HGARGLRYLLLQHNQLGSSGLPAGALRPLR-GLHTLHLYGNGLDRVPPALPRRL---RAL 363
Query: 494 SLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK----LRILNISHNRLR 549
L HN++A + R + P L ++L++N ++ + + +F+ LR L+++ N+L
Sbjct: 364 VLPHNHVAALGARDLVATPGLTELNLAYNRLA--SARVHHRAFRRLRALRSLDLAGNQLT 421
Query: 550 SLPRDVFSNTIIEKLDISYNQ 570
LP + T + L + NQ
Sbjct: 422 RLPMGL--PTGLRTLQLQRNQ 440
Score = 122 (48.0 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 76/331 (22%), Positives = 142/331 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N++ ++ F L+ + L N+L L + F E + L +S +N+ Y
Sbjct: 155 NQVMEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAIATLSLS-----NNQLSY 209
Query: 258 YILNKNLN-TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKI----------SKIHN 306
L +L +LE L + NN I + +L T L + L++N++ SK+H+
Sbjct: 210 --LPPSLPPSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTDSGLDATTFSKLHS 267
Query: 307 ----NLFH-------FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKS-- 353
+L H + + L + L N + +E+ + + L + L +N L S
Sbjct: 268 LEYLDLSHNQLTTVPAGLPRTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLGSSG 327
Query: 354 IKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK-LDLQDNKLKDFNLNVFSNITS 412
+ + + L + + L N + + P LP ++ L L N + ++ +
Sbjct: 328 LPAGALRPLRGLHTLHLYGNGLDRVPPA----LPRRLRALVLPHNHVAALGAR---DLVA 380
Query: 413 KQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
LNL+ N + + + + + ++SLDL+ N++ +P+ L T LR L L
Sbjct: 381 TPGLTELNLAYNRLASARVHHRAFRRLRALRSLDLAGNQLTRLPMG-LPT---GLRTLQL 436
Query: 472 DFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
N+++ L+ LD L LSL HN + V
Sbjct: 437 QRNQLRMLEPEPLAGLDQLRELSLAHNRLRV 467
Score = 71 (30.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 55 DLKFIDPSAF-DNID-ACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLN 112
D +D F DNI A L+L+ N Q++ELP ++ + TL+L +N +S
Sbjct: 59 DCDGLDLRVFPDNITRAAQHLSLQ--NNQLQELPYNELSRLSGLR--TLNLHNNLISSEG 114
Query: 113 MAT-LYSNVTKLQHL 126
+ + ++T+LQHL
Sbjct: 115 LPDEAFESLTQLQHL 129
>UNIPROTKB|D6RA51 [details] [associations]
symbol:TLR3 "Toll-like receptor 3, isoform CRA_b"
species:9606 "Homo sapiens" [GO:0002756 "MyD88-independent
toll-like receptor signaling pathway" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0050729 "positive
regulation of inflammatory response" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027173 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 EMBL:CH471056 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 PANTHER:PTHR24365:SF5
UniGene:Hs.657724 HGNC:HGNC:11849 EMBL:AC104070 IPI:IPI00964068
SMR:D6RA51 Ensembl:ENST00000513189 Uniprot:D6RA51
Length = 351
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 81/280 (28%), Positives = 136/280 (48%)
Query: 275 NNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
N I + L L +NL++N++S++ + F F + L E+ L +N ++ I+++
Sbjct: 85 NTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTN--LTELHLMSNSIQKIKNNP 142
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP---NAFVNLPNLVK 391
F K L T+ LS+N L S K + L N+ ++LS N+I+ + + F N +L K
Sbjct: 143 FVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFAN-SSLKK 201
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI-TNLYEN-DKKQAPIYIKSLDLSNN 449
L+L N++K+F+ F I L L+N + +L E + A I++L LSN+
Sbjct: 202 LELSSNQIKEFSPGCFHAIGRL---FGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNS 258
Query: 450 RIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTF 508
++ FL +L L L +N + L LE L++E N+I + F
Sbjct: 259 QLSTTSNTTFLGLKWTNLTMLDLSYNNLNVW-------LKCLEHLNMEDNDIPGIKSNMF 311
Query: 509 IGMPNLQIIDLS--FNEISMLTGEQFYF--SFKLRILNIS 544
G+ NL+ + LS F + LT E F L ILN++
Sbjct: 312 TGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLT 351
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 74/294 (25%), Positives = 135/294 (45%)
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
T++ +NL +N++ ++ +F + +L + + N + +E + L L + L +
Sbjct: 51 TNITVLNLTHNQLRRLP--AANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 108
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N L + +F N+ + L N I+ I N FV NL+ LDL N L L
Sbjct: 109 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQV 168
Query: 409 NITSKQTPMNLNLSNNYITNLYENDKKQ-APIYIKSLDLSNNRIQEV-PVNFL---QTFA 463
+ + Q L LSNN I L + A +K L+LS+N+I+E P F + F
Sbjct: 169 QLENLQ---ELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFG 225
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMP--NLQIIDLSF 521
L + L + + L N + L SL ++ ++ TF+G+ NL ++DLS+
Sbjct: 226 LFLNNVQLGPSLTEKL-CLELANTSIRNL-SLSNSQLSTTSNTTFLGLKWTNLTMLDLSY 283
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQDKIR 574
N +++ + L LN+ N + + ++F+ I ++ L +S + +R
Sbjct: 284 NNLNV-------WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLR 330
Score = 185 (70.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 83/318 (26%), Positives = 150/318 (47%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N+ L+L+ N+L+ L + F + +L L++ F+ + E P L + L L+ L +
Sbjct: 52 NITVLNLTHNQLR--RLPAANFTRYSQLTSLDVGFNTISKLE-PE--LCQKLPMLKVLNL 106
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N + + + + T+L ++L N I KI NN F K L + LS+N L +
Sbjct: 107 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNN--PFVKQKNLITLDLSHNGLSSTKL 164
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTS---FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
T L+ L + LS N ++++K+ F N +++ + LS NQIK P F + L
Sbjct: 165 GTQVQLENLQELLLSNNKIQALKSEELDIFAN-SSLKKLELSSNQIKEFSPGCFHAIGRL 223
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL-YENDKKQAPIYIKSLDL-- 446
L L N+ + ++T K + L L+N I NL N + L L
Sbjct: 224 FGLFLN-------NVQLGPSLTEK---LCLELANTSIRNLSLSNSQLSTTSNTTFLGLKW 273
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN--NIAVVV 504
+N + ++ N L + L L ++ N+I + + F L L+ LSL ++ ++ +
Sbjct: 274 TNLTMLDLSYNNLNVWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLT 333
Query: 505 KRTFIGMPN--LQIIDLS 520
TF+ + + L I++L+
Sbjct: 334 NETFVSLAHSPLHILNLT 351
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 36/114 (31%), Positives = 58/114 (50%)
Query: 438 PIYIKSLDLSNNRIQEVPV-NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLE 496
P I L+L++N+++ +P NF T L L + FN I L+ L +L++L+L+
Sbjct: 50 PTNITVLNLTHNQLRRLPAANF--TRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 107
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
HN ++ + +TF NL + L N I + F L L++SHN L S
Sbjct: 108 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 161
Score = 117 (46.2 bits), Expect = 0.00069, P = 0.00069
Identities = 68/309 (22%), Positives = 131/309 (42%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYS----NVTKLQHLGTTI 130
L +T+ Q+ LP+ F + + +LD+ N +S L V LQH +
Sbjct: 56 LNLTHNQLRRLPAANFTRYSQLT--SLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQ 113
Query: 131 LKDREKXX-XXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXX 189
L D+ N I + N F QK+++ ++N +
Sbjct: 114 LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVK-QKNLITLDLSHNGLSSTKLGTQVQLEN 172
Query: 190 XXXXXXRCNKITDLNG---NLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEIS 246
NKI L ++F + +L++L LS N QI E + F +L
Sbjct: 173 LQELLLSNNKIQALKSEELDIFANS-SLKKLELSSN--QIKEFSPGCFHAIGRL------ 223
Query: 247 FSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIR--NYSLYNLTSLNYINLEYNKISKI 304
F LF +N L +L L + N +I+N+ N L ++ ++ L++ ++ +
Sbjct: 224 FGLFLNN----VQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTML 279
Query: 305 HNNLFHFNIH-KRLKEIRLSNNYLELIESDTFYNLKELNTITLS--YNLLKSIKTTSFKN 361
+ + N+ K L+ + + +N + I+S+ F L L ++LS + L+++ +F +
Sbjct: 280 DLSYNNLNVWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVS 339
Query: 362 L-NNMLNIV 369
L ++ L+I+
Sbjct: 340 LAHSPLHIL 348
Score = 116 (45.9 bits), Expect = 0.00088, P = 0.00088
Identities = 41/132 (31%), Positives = 63/132 (47%)
Query: 1 MTLDLSHNKLSVLNMATLYS--NVTKLQHLGTTI--LKGDQLQGIFNSKLRELEITGKDL 56
+TLDLSHN LS + T N+ +L I LK ++L NS L++LE++ +
Sbjct: 150 ITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 209
Query: 57 KFIDPSAFDNIDACYDLTLKITNTQI-EELPSGLFDKIENIEQMTLDLSHNKLSVLNMAT 115
K P F I + L L N Q+ L L ++ N L LS+++LS + T
Sbjct: 210 KEFSPGCFHAIGRLFGLFLN--NVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 267
Query: 116 L----YSNVTKL 123
++N+T L
Sbjct: 268 FLGLKWTNLTML 279
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 218 (81.8 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 74/246 (30%), Positives = 117/246 (47%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
KN+R T+ +NL N+I I N F H L+ ++LS N++ IE F
Sbjct: 65 KNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRH--LEILQLSRNHIRTIEIGAFNG 122
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L LNT+ L N L +I +F L+ + + L N I+ I AF +P+L +LDL +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 398 K-LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
K L + F ++ NL N + NL E I + LDLS N + +
Sbjct: 183 KRLSYISEGAFEGLS------NLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRP 236
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
Q L+KL++ ++I+ ++ AF NL L ++L HNN+ ++ F + +L+
Sbjct: 237 GSFQGLMH-LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 295
Query: 517 IDLSFN 522
I L N
Sbjct: 296 IHLHHN 301
Score = 179 (68.1 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 63/204 (30%), Positives = 105/204 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N+I + N F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++S I F +
Sbjct: 146 Y--LSK-LKEL-WLR--NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL 199
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L E L +L+ + LS N L +I+ SF+ L ++ + + +QI
Sbjct: 200 RYLNLAMCN----LREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKL 399
+ I NAF NL +LV+++L N L
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNL 279
Score = 166 (63.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 58/252 (23%), Positives = 120/252 (47%)
Query: 297 EYNKISKIHNNLFHF--NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+++K+ + NL I + + L N +++I+ ++F +L+ L + LS N +++I
Sbjct: 56 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTI 115
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
+ +F L N+ + L N++ I AFV L L +L L++N ++ F+ I S +
Sbjct: 116 EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 175
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
L+L + + ++ L+L+ ++E+P N L +L L N
Sbjct: 176 ---RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP-NLTPLI--KLDELDLSGN 229
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
+ + +F L L+ L + + I V+ + F + +L I+L+ N +++L + F
Sbjct: 230 HLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 289
Query: 535 SFKLRILNISHN 546
L +++ HN
Sbjct: 290 LHHLERIHLHHN 301
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 61/229 (26%), Positives = 112/229 (48%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N ++ IK SFK+L ++ + LS N I+ I AF L NL L+L DN+L
Sbjct: 81 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIP 140
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNFLQTF 462
F ++ + L L NN I ++ + P ++ LDL R+ + +
Sbjct: 141 NGAFVYLSKLK---ELWLRNNPIESIPSYAFNRIPS-LRRLDLGELKRLSYISEGAFEGL 196
Query: 463 ADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
++ LR L L ++ + + T LD L+L N+++ + +F G+ +LQ + +
Sbjct: 197 SN-LRYLNLAMCNLREIPNLTPLIKLDELDLSG---NHLSAIRPGSFQGLMHLQKLWMIQ 252
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
++I ++ F L +N++HN L LP D+F+ +E++ + +N
Sbjct: 253 SQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 64/238 (26%), Positives = 114/238 (47%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N + L+L N++QII++NS F L++L++S + + E + NLNTLE +
Sbjct: 77 NTRLLNLHENQIQIIKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE---L 131
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN-NYLELIE 331
+N + I N + L+ L + L N I I + + FN L+ + L L I
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDLGELKRLSYIS 189
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
F L L + L+ L+ I + L + + LS N + I P +F L +L K
Sbjct: 190 EGAFEGLSNLRYLNLAMCNLREIPNLT--PLIKLDELDLSGNHLSAIRPGSFQGLMHLQK 247
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L + ++++ N F N+ Q+ + +NL++N +T L +D +++ + L +N
Sbjct: 248 LWMIQSQIQVIERNAFDNL---QSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 301
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 57/215 (26%), Positives = 98/215 (45%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N+I+ I + L +LN + L N+++ I N F + +LKE+
Sbjct: 97 KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL--SKLKELW 154
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I S F + L + L L I +F+ L+N+ + L+ ++ I P
Sbjct: 155 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P 213
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT-NLYENDKKQAPI 439
N L L +LDL N L F + Q + I N ++N +
Sbjct: 214 N-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS---- 268
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+ ++L++N + +P + L T L +++L N
Sbjct: 269 -LVEINLAHNNLTLLPHD-LFTPLHHLERIHLHHN 301
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 218 (81.8 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 74/246 (30%), Positives = 117/246 (47%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
KN+R T+ +NL N+I I N F H L+ ++LS N++ IE F
Sbjct: 65 KNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRH--LEILQLSRNHIRTIEIGAFNG 122
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L LNT+ L N L +I +F L+ + + L N I+ I AF +P+L +LDL +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 398 K-LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
K L + F ++ NL N + NL E I + LDLS N + +
Sbjct: 183 KRLSYISEGAFEGLS------NLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRP 236
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
Q L+KL++ ++I+ ++ AF NL L ++L HNN+ ++ F + +L+
Sbjct: 237 GSFQGLMH-LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 295
Query: 517 IDLSFN 522
I L N
Sbjct: 296 IHLHHN 301
Score = 179 (68.1 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 63/204 (30%), Positives = 105/204 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N+I + N F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++S I F +
Sbjct: 146 Y--LSK-LKEL-WLR--NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL 199
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L E L +L+ + LS N L +I+ SF+ L ++ + + +QI
Sbjct: 200 RYLNLAMCN----LREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKL 399
+ I NAF NL +LV+++L N L
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNL 279
Score = 166 (63.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 58/252 (23%), Positives = 120/252 (47%)
Query: 297 EYNKISKIHNNLFHF--NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+++K+ + NL I + + L N +++I+ ++F +L+ L + LS N +++I
Sbjct: 56 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTI 115
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
+ +F L N+ + L N++ I AFV L L +L L++N ++ F+ I S +
Sbjct: 116 EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 175
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
L+L + + ++ L+L+ ++E+P N L +L L N
Sbjct: 176 ---RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP-NLTPLI--KLDELDLSGN 229
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
+ + +F L L+ L + + I V+ + F + +L I+L+ N +++L + F
Sbjct: 230 HLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 289
Query: 535 SFKLRILNISHN 546
L +++ HN
Sbjct: 290 LHHLERIHLHHN 301
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 61/229 (26%), Positives = 112/229 (48%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N ++ IK SFK+L ++ + LS N I+ I AF L NL L+L DN+L
Sbjct: 81 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIP 140
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNFLQTF 462
F ++ + L L NN I ++ + P ++ LDL R+ + +
Sbjct: 141 NGAFVYLSKLK---ELWLRNNPIESIPSYAFNRIPS-LRRLDLGELKRLSYISEGAFEGL 196
Query: 463 ADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
++ LR L L ++ + + T LD L+L N+++ + +F G+ +LQ + +
Sbjct: 197 SN-LRYLNLAMCNLREIPNLTPLIKLDELDLSG---NHLSAIRPGSFQGLMHLQKLWMIQ 252
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
++I ++ F L +N++HN L LP D+F+ +E++ + +N
Sbjct: 253 SQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 64/238 (26%), Positives = 114/238 (47%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N + L+L N++QII++NS F L++L++S + + E + NLNTLE +
Sbjct: 77 NTRLLNLHENQIQIIKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE---L 131
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN-NYLELIE 331
+N + I N + L+ L + L N I I + + FN L+ + L L I
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDLGELKRLSYIS 189
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
F L L + L+ L+ I + L + + LS N + I P +F L +L K
Sbjct: 190 EGAFEGLSNLRYLNLAMCNLREIPNLT--PLIKLDELDLSGNHLSAIRPGSFQGLMHLQK 247
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L + ++++ N F N+ Q+ + +NL++N +T L +D +++ + L +N
Sbjct: 248 LWMIQSQIQVIERNAFDNL---QSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 301
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 57/215 (26%), Positives = 98/215 (45%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N+I+ I + L +LN + L N+++ I N F + +LKE+
Sbjct: 97 KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL--SKLKELW 154
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I S F + L + L L I +F+ L+N+ + L+ ++ I P
Sbjct: 155 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P 213
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT-NLYENDKKQAPI 439
N L L +LDL N L F + Q + I N ++N +
Sbjct: 214 N-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS---- 268
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+ ++L++N + +P + L T L +++L N
Sbjct: 269 -LVEINLAHNNLTLLPHD-LFTPLHHLERIHLHHN 301
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 218 (81.8 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 74/246 (30%), Positives = 117/246 (47%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
KN+R T+ +NL N+I I N F H L+ ++LS N++ IE F
Sbjct: 65 KNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRH--LEILQLSRNHIRTIEIGAFNG 122
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L LNT+ L N L +I +F L+ + + L N I+ I AF +P+L +LDL +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 398 K-LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
K L + F ++ NL N + NL E I + LDLS N + +
Sbjct: 183 KRLSYISEGAFEGLS------NLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRP 236
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
Q L+KL++ ++I+ ++ AF NL L ++L HNN+ ++ F + +L+
Sbjct: 237 GSFQGLMH-LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 295
Query: 517 IDLSFN 522
I L N
Sbjct: 296 IHLHHN 301
Score = 179 (68.1 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 63/204 (30%), Positives = 105/204 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N+I + N F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++S I F +
Sbjct: 146 Y--LSK-LKEL-WLR--NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL 199
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L E L +L+ + LS N L +I+ SF+ L ++ + + +QI
Sbjct: 200 RYLNLAMCN----LREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKL 399
+ I NAF NL +LV+++L N L
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNL 279
Score = 166 (63.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 58/252 (23%), Positives = 120/252 (47%)
Query: 297 EYNKISKIHNNLFHF--NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+++K+ + NL I + + L N +++I+ ++F +L+ L + LS N +++I
Sbjct: 56 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTI 115
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
+ +F L N+ + L N++ I AFV L L +L L++N ++ F+ I S +
Sbjct: 116 EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 175
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
L+L + + ++ L+L+ ++E+P N L +L L N
Sbjct: 176 ---RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP-NLTPLI--KLDELDLSGN 229
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
+ + +F L L+ L + + I V+ + F + +L I+L+ N +++L + F
Sbjct: 230 HLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 289
Query: 535 SFKLRILNISHN 546
L +++ HN
Sbjct: 290 LHHLERIHLHHN 301
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 61/229 (26%), Positives = 112/229 (48%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N ++ IK SFK+L ++ + LS N I+ I AF L NL L+L DN+L
Sbjct: 81 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIP 140
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNFLQTF 462
F ++ + L L NN I ++ + P ++ LDL R+ + +
Sbjct: 141 NGAFVYLSKLK---ELWLRNNPIESIPSYAFNRIPS-LRRLDLGELKRLSYISEGAFEGL 196
Query: 463 ADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
++ LR L L ++ + + T LD L+L N+++ + +F G+ +LQ + +
Sbjct: 197 SN-LRYLNLAMCNLREIPNLTPLIKLDELDLSG---NHLSAIRPGSFQGLMHLQKLWMIQ 252
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
++I ++ F L +N++HN L LP D+F+ +E++ + +N
Sbjct: 253 SQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 64/238 (26%), Positives = 114/238 (47%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N + L+L N++QII++NS F L++L++S + + E + NLNTLE +
Sbjct: 77 NTRLLNLHENQIQIIKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE---L 131
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN-NYLELIE 331
+N + I N + L+ L + L N I I + + FN L+ + L L I
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDLGELKRLSYIS 189
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
F L L + L+ L+ I + L + + LS N + I P +F L +L K
Sbjct: 190 EGAFEGLSNLRYLNLAMCNLREIPNLT--PLIKLDELDLSGNHLSAIRPGSFQGLMHLQK 247
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L + ++++ N F N+ Q+ + +NL++N +T L +D +++ + L +N
Sbjct: 248 LWMIQSQIQVIERNAFDNL---QSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 301
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 57/215 (26%), Positives = 98/215 (45%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N+I+ I + L +LN + L N+++ I N F + +LKE+
Sbjct: 97 KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL--SKLKELW 154
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I S F + L + L L I +F+ L+N+ + L+ ++ I P
Sbjct: 155 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P 213
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT-NLYENDKKQAPI 439
N L L +LDL N L F + Q + I N ++N +
Sbjct: 214 N-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS---- 268
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+ ++L++N + +P + L T L +++L N
Sbjct: 269 -LVEINLAHNNLTLLPHD-LFTPLHHLERIHLHHN 301
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 218 (81.8 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 74/246 (30%), Positives = 117/246 (47%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
KN+R T+ +NL N+I I N F H L+ ++LS N++ IE F
Sbjct: 65 KNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRH--LEILQLSRNHIRTIEIGAFNG 122
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L LNT+ L N L +I +F L+ + + L N I+ I AF +P+L +LDL +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 398 K-LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
K L + F ++ NL N + NL E I + LDLS N + +
Sbjct: 183 KRLSYISEGAFEGLS------NLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRP 236
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
Q L+KL++ ++I+ ++ AF NL L ++L HNN+ ++ F + +L+
Sbjct: 237 GSFQGLMH-LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 295
Query: 517 IDLSFN 522
I L N
Sbjct: 296 IHLHHN 301
Score = 179 (68.1 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 63/204 (30%), Positives = 105/204 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N+I + N F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++S I F +
Sbjct: 146 Y--LSK-LKEL-WLR--NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL 199
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L E L +L+ + LS N L +I+ SF+ L ++ + + +QI
Sbjct: 200 RYLNLAMCN----LREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKL 399
+ I NAF NL +LV+++L N L
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNL 279
Score = 166 (63.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 58/252 (23%), Positives = 120/252 (47%)
Query: 297 EYNKISKIHNNLFHF--NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+++K+ + NL I + + L N +++I+ ++F +L+ L + LS N +++I
Sbjct: 56 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTI 115
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
+ +F L N+ + L N++ I AFV L L +L L++N ++ F+ I S +
Sbjct: 116 EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 175
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
L+L + + ++ L+L+ ++E+P N L +L L N
Sbjct: 176 ---RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP-NLTPLI--KLDELDLSGN 229
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
+ + +F L L+ L + + I V+ + F + +L I+L+ N +++L + F
Sbjct: 230 HLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 289
Query: 535 SFKLRILNISHN 546
L +++ HN
Sbjct: 290 LHHLERIHLHHN 301
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 61/229 (26%), Positives = 112/229 (48%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N ++ IK SFK+L ++ + LS N I+ I AF L NL L+L DN+L
Sbjct: 81 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIP 140
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNFLQTF 462
F ++ + L L NN I ++ + P ++ LDL R+ + +
Sbjct: 141 NGAFVYLSKLK---ELWLRNNPIESIPSYAFNRIPS-LRRLDLGELKRLSYISEGAFEGL 196
Query: 463 ADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
++ LR L L ++ + + T LD L+L N+++ + +F G+ +LQ + +
Sbjct: 197 SN-LRYLNLAMCNLREIPNLTPLIKLDELDLSG---NHLSAIRPGSFQGLMHLQKLWMIQ 252
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
++I ++ F L +N++HN L LP D+F+ +E++ + +N
Sbjct: 253 SQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 64/238 (26%), Positives = 114/238 (47%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N + L+L N++QII++NS F L++L++S + + E + NLNTLE +
Sbjct: 77 NTRLLNLHENQIQIIKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE---L 131
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN-NYLELIE 331
+N + I N + L+ L + L N I I + + FN L+ + L L I
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDLGELKRLSYIS 189
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
F L L + L+ L+ I + L + + LS N + I P +F L +L K
Sbjct: 190 EGAFEGLSNLRYLNLAMCNLREIPNLT--PLIKLDELDLSGNHLSAIRPGSFQGLMHLQK 247
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L + ++++ N F N+ Q+ + +NL++N +T L +D +++ + L +N
Sbjct: 248 LWMIQSQIQVIERNAFDNL---QSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 301
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 57/215 (26%), Positives = 98/215 (45%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N+I+ I + L +LN + L N+++ I N F + +LKE+
Sbjct: 97 KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL--SKLKELW 154
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I S F + L + L L I +F+ L+N+ + L+ ++ I P
Sbjct: 155 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P 213
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT-NLYENDKKQAPI 439
N L L +LDL N L F + Q + I N ++N +
Sbjct: 214 N-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS---- 268
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+ ++L++N + +P + L T L +++L N
Sbjct: 269 -LVEINLAHNNLTLLPHD-LFTPLHHLERIHLHHN 301
>DICTYBASE|DDB_G0278509 [details] [associations]
symbol:DDB_G0278509 "MLK family protein kinase
DDB_G0278509" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 dictyBase:DDB_G0278509
GO:GO:0005524 EMBL:AAFI02000023 SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
ProtClustDB:CLSZ2846780 RefSeq:XP_642407.1
ProteinModelPortal:Q54XZ5 EnsemblProtists:DDB0220138 GeneID:8621612
KEGG:ddi:DDB_G0278509 OMA:LEIPENC Uniprot:Q54XZ5
Length = 1248
Score = 222 (83.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 114/429 (26%), Positives = 185/429 (43%)
Query: 155 NGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCN--KITDLNGN---LFR 209
N N ++ K ++ NNNNN + ++ N KI ++ LF
Sbjct: 292 NNNNIENVNKINIEDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKIEVISNKPIQLFS 351
Query: 210 HLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSL-FNSNEFPYYILNKNLNTLE 268
Y+ L+ S + Q F F L S L + E + + ++
Sbjct: 352 D-YDPPILTTSTSTSQSKIKTQQPFLFFSSNYLNSSSTELDLSEQELNEFPIFDEKEIVQ 410
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF--NIH--KRLKEIRLSN 324
+ + + NI++ L T+++ NLE ++ +NNL +I K L + LS+
Sbjct: 411 GYKIIDLSFNNIKSIPLDAFTNIS--NLE--QLIMFNNNLSDVPSSIEFLKHLTILDLSH 466
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N L I + NL L + LS N LK TT NL N+ ++L NQI I
Sbjct: 467 NNLHEICRE-LGNLSFLRELYLSNNSLKKFPTTG--NLYNLKKLILDNNQITTIPIECVE 523
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
L L LDL NK+ + + T+ T N N +N ++Y+ K +K L
Sbjct: 524 PLIQLQTLDLSFNKIGTITSSTTTTTTTTTT--NNNNNNGGGGSIYQKMKN-----LKQL 576
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
+LS+N +QE+P + L L +D+N+I L +L L L++ +N I
Sbjct: 577 NLSHNELQEIPSSLRHL--SKLHSLSIDYNQISVLPDKVVASLSRLAKLTISNNKI---- 630
Query: 505 KRTFIGMPNLQ-IIDL--SFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTII 561
K+ + NL +I+L S N I +L Y S L+ LN+++N L+ LP ++ T +
Sbjct: 631 KQLPFAINNLSSLIELNASNNVIELLPDSICYLS-NLKKLNLNNNNLKELPSNIGFLTKL 689
Query: 562 EKLDISYNQ 570
L + NQ
Sbjct: 690 VDLQLYNNQ 698
Score = 205 (77.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 122/455 (26%), Positives = 199/455 (43%)
Query: 155 NGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNL 214
N N S + NNNNN + ++ N ITD N L HL +L
Sbjct: 181 NNNNNNSNSNSNSNSNSNNNNNNNNNNNNNNNNNNNTK-----NNITDEN-QLEIHLNDL 234
Query: 215 Q-ELSLSFNKLQIIELNSNVFDVFEKLQLLEISF-SLFNSNEFPYYILN-KNLNTLEWLA 271
+ S NK+ +NS+ + + S NSN I N KN N +
Sbjct: 235 SIDSDNSNNKINKQYVNSDNSNNNNSNNSNNNNIGSNINSN---CNIENEKNSNNTDD-N 290
Query: 272 MDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR-LSNNYLELI 330
+NNNI+N+ ++ + + N N N + +NN + N + +I +SN ++L
Sbjct: 291 NNNNNIENVNKINIEDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKIEVISNKPIQLF 350
Query: 331 ESDTFYNLKELNTIT-LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF--VNLP 387
SD Y+ L T T S + +K+ + F + +N LN + + N F +
Sbjct: 351 -SD--YDPPILTTSTSTSQSKIKTQQPFLFFS-SNYLNSSSTELDLSEQELNEFPIFDEK 406
Query: 388 NLVK----LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
+V+ +DL N +K L+ F+NI++ + L + NN ++++ + + + I
Sbjct: 407 EIVQGYKIIDLSFNNIKSIPLDAFTNISNLE---QLIMFNNNLSDVPSSIEFLKHLTI-- 461
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
LDLS+N + E+ L + LR+LYL N +K T GNL L+ L L++N I +
Sbjct: 462 LDLSHNNLHEI-CRELGNLS-FLRELYLSNNSLKKFPTT--GNLYNLKKLILDNNQITTI 517
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLT--------------------GEQFYFSFK-LRILN 542
+ LQ +DLSFN+I +T G Y K L+ LN
Sbjct: 518 PIECVEPLIQLQTLDLSFNKIGTITSSTTTTTTTTTTNNNNNNGGGGSIYQKMKNLKQLN 577
Query: 543 ISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGR 577
+SHN L+ +P + + + L I YNQ + P +
Sbjct: 578 LSHNELQEIPSSLRHLSKLHSLSIDYNQISVLPDK 612
Score = 198 (74.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 74/272 (27%), Positives = 132/272 (48%)
Query: 213 NLQEL--SLSFNK-LQIIELN-SNVFDVFEKLQLLEISFSLF-NSNEFPYYILNKNLNTL 267
NL ++ S+ F K L I++L+ +N+ ++ +L L L+ ++N + NL L
Sbjct: 445 NLSDVPSSIEFLKHLTILDLSHNNLHEICRELGNLSFLRELYLSNNSLKKFPTTGNLYNL 504
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
+ L +DNN I I + L L ++L +NKI I ++ +NN
Sbjct: 505 KKLILDNNQITTIPIECVEPLIQLQTLDLSFNKIGTITSSTT-----TTTTTTTTNNNNN 559
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+ +K L + LS+N L+ I + S ++L+ + ++ + +NQI + +L
Sbjct: 560 NGGGGSIYQKMKNLKQLNLSHNELQEIPS-SLRHLSKLHSLSIDYNQISVLPDKVVASLS 618
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
L KL + +NK+K + +N++S + LN SNN I L ++ + + K L+L+
Sbjct: 619 RLAKLTISNNKIKQLPFAI-NNLSSL---IELNASNNVIELLPDSICYLSNL--KKLNLN 672
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
NN ++E+P N F L L L N+I L
Sbjct: 673 NNNLKELPSNI--GFLTKLVDLQLYNNQISSL 702
Score = 192 (72.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 95/374 (25%), Positives = 164/374 (43%)
Query: 170 KKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIEL 229
+ NNNNN + S+ N + N N ++ + +L + N L I
Sbjct: 180 QNNNNNNSNSNSNSNSNSNNNNNNNNNNNNNNNNNNNTKNNITDENQLEIHLNDLSIDSD 239
Query: 230 NSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNT---LEWLAMDNNNIKNIRNYSLY 286
NSN + K + + + NSN + N+N+ +E NN N N ++
Sbjct: 240 NSN--NKINKQYVNSDNSNNNNSNNSNNNNIGSNINSNCNIENEKNSNNTDDNNNNNNIE 297
Query: 287 NLTSLNYI-NLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT-- 343
N+ +N N N + +NN + N + +NN +E+I + + +
Sbjct: 298 NVNKINIEDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKIEVISNKPIQLFSDYDPPI 357
Query: 344 ITLSYNLLKS-IKTTS-FKNLN-NMLNIVLSFNQIKYIYPNAF--VNLPNLVK----LDL 394
+T S + +S IKT F + N LN + + N F + +V+ +DL
Sbjct: 358 LTTSTSTSQSKIKTQQPFLFFSSNYLNSSSTELDLSEQELNEFPIFDEKEIVQGYKIIDL 417
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
N +K L+ F+NI++ + L + NN ++++ + + + I LDLS+N + E+
Sbjct: 418 SFNNIKSIPLDAFTNISNLE---QLIMFNNNLSDVPSSIEFLKHLTI--LDLSHNNLHEI 472
Query: 455 PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNL 514
L + LR+LYL N +K T GNL L+ L L++N I + + L
Sbjct: 473 -CRELGNLS-FLRELYLSNNSLKKFPTT--GNLYNLKKLILDNNQITTIPIECVEPLIQL 528
Query: 515 QIIDLSFNEISMLT 528
Q +DLSFN+I +T
Sbjct: 529 QTLDLSFNKIGTIT 542
Score = 184 (69.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 102/436 (23%), Positives = 188/436 (43%)
Query: 149 NKI-TDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNL 207
N I +++N N +K+ NNNNN + + K N + N N
Sbjct: 266 NNIGSNINSNCNIENEKNSNNTDDNNNNNN--IENVNKINIEDNNNNNNNNNNNNNNNNN 323
Query: 208 FRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSN---EFPYYILNKN 263
+ N + + NK+++I +F ++ +L S S S + P+ + N
Sbjct: 324 NNNNNNNNNNNNN-NKIEVISNKPIQLFSDYDP-PILTTSTSTSQSKIKTQQPFLFFSSN 381
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSL--NY--INLEYNKISKIHNNLFHFNIHKRLKE 319
+D + + + + +++ + Y I+L +N I I + F NI L++
Sbjct: 382 YLNSSSTELDLSE-QELNEFPIFDEKEIVQGYKIIDLSFNNIKSIPLDAFT-NI-SNLEQ 438
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ + NN L + S + LK L + LS+N L I NL+ + + LS N +K +
Sbjct: 439 LIMFNNNLSDVPSSIEF-LKHLTILDLSHNNLHEI-CRELGNLSFLRELYLSNNSLKK-F 495
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
P NL NL KL L +N++ + + QT L+LS N I + +
Sbjct: 496 PTTG-NLYNLKKLILDNNQITTIPIECVEPLIQLQT---LDLSFNKIGTITSSTTTTTT- 550
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
+ +NN + Q + L++L L NE++ + ++ +L L LS+++N
Sbjct: 551 ---TTTTNNNNNNGGGGSIYQKMKN-LKQLNLSHNELQEIPSS-LRHLSKLHSLSIDYNQ 605
Query: 500 IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT 559
I+V+ + + L + +S N+I L S + LN S+N + LP + +
Sbjct: 606 ISVLPDKVVASLSRLAKLTISNNKIKQLPFAINNLSSLIE-LNASNNVIELLPDSICYLS 664
Query: 560 IIEKLDISYNQDKIRP 575
++KL+++ N K P
Sbjct: 665 NLKKLNLNNNNLKELP 680
Score = 169 (64.5 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 103/449 (22%), Positives = 189/449 (42%)
Query: 149 NKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLF 208
N ++ + N + K V + +NNNN S+ CN + N N
Sbjct: 232 NDLSIDSDNSNNKINKQYVNSDNSNNNN----SNNSNNNNIGSNINSNCNIENEKNSNNT 287
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
N + + NK+ I + N+N + + + N+N N N N +E
Sbjct: 288 DDNNNNNNIE-NVNKINIEDNNNNNNNNNNNNNNNNNNNNNNNNNN------NNNNNKIE 340
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
+ N I+ +Y LT+ + +KI LF + + L + E
Sbjct: 341 --VISNKPIQLFSDYDPPILTTST--STSQSKIKTQQPFLFFSSNYLNSSSTELDLSEQE 396
Query: 329 LIESDTFYNLKEL----NTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
L E F + KE+ I LS+N +KSI +F N++N+ +++ N + + P++
Sbjct: 397 LNEFPIF-DEKEIVQGYKIIDLSFNNIKSIPLDAFTNISNLEQLIMFNNNLSDV-PSSIE 454
Query: 385 NLPNLVKLDLQDNKLKDF-----NLNVF-----SNITSKQTPM-----NLN---LSNNYI 426
L +L LDL N L + NL+ SN + K+ P NL L NN I
Sbjct: 455 FLKHLTILDLSHNNLHEICRELGNLSFLRELYLSNNSLKKFPTTGNLYNLKKLILDNNQI 514
Query: 427 TNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGN 486
T + + + I +++LDLS N+I + + T + + N + +
Sbjct: 515 TTI-PIECVEPLIQLQTLDLSFNKIGTITSSTTTTTTTTTT----NNNNNNGGGGSIYQK 569
Query: 487 LDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
+ L+ L+L HN + + + + L + + +N+IS+L + +L L IS+N
Sbjct: 570 MKNLKQLNLSHNELQEIPS-SLRHLSKLHSLSIDYNQISVLPDKVVASLSRLAKLTISNN 628
Query: 547 RLRSLPRDVFSNTIIEKLDISYNQDKIRP 575
+++ LP + + + + +L+ S N ++ P
Sbjct: 629 KIKQLPFAINNLSSLIELNASNNVIELLP 657
Score = 155 (59.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 91/358 (25%), Positives = 146/358 (40%)
Query: 232 NVFDVFEKLQ--LLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLT 289
N+ FE Q LL+ + N+N N N N +NNN N N + N+T
Sbjct: 163 NIDKYFESNQHLLLQTLQNNNNNNSNSNSNSNSNSNNNNNNNNNNNNNNNNNNNTKNNIT 222
Query: 290 SLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL-KELNTITLSY 348
N + + N +S I ++ + I+K+ SNN ++ N+ +N+
Sbjct: 223 DENQLEIHLNDLS-IDSDNSNNKINKQYVNSDNSNNNNSNNSNNN--NIGSNINSNCNIE 279
Query: 349 NLLKSIKTTSFKNLNNMLNI-VLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
N S T N NN+ N+ ++ N N N + +N + N N
Sbjct: 280 NEKNSNNTDDNNNNNNIENVNKINIEDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKI 339
Query: 408 SNITSKQTPMNLNLSNNYITNLYEND----KKQAPI------YIKS----LDLSNNRIQE 453
I++K + + +T K Q P Y+ S LDLS + E
Sbjct: 340 EVISNKPIQLFSDYDPPILTTSTSTSQSKIKTQQPFLFFSSNYLNSSSTELDLSEQELNE 399
Query: 454 VPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPN 513
P+ + + + L FN IK + AF N+ LE L + +NN++ V + +
Sbjct: 400 FPIFDEKEIVQGYKIIDLSFNNIKSIPLDAFTNISNLEQLIMFNNNLSDVPSSIEF-LKH 458
Query: 514 LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
L I+DLS N + + E SF LR L +S+N L+ P N ++KL + NQ
Sbjct: 459 LTILDLSHNNLHEICRELGNLSF-LRELYLSNNSLKKFPTT--GNLYNLKKLILDNNQ 513
Score = 145 (56.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 61/232 (26%), Positives = 116/232 (50%)
Query: 205 GNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNL 264
G++++ + NL++L+LS N+LQ E+ S++ + KL L I ++ + P ++ +L
Sbjct: 564 GSIYQKMKNLKQLNLSHNELQ--EIPSSLRHL-SKLHSLSIDYNQISV--LPDKVV-ASL 617
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
+ L L + NN IK + +++ NL+SL +N N I + +++ + + LK++ L+N
Sbjct: 618 SRLAKLTISNNKIKQLP-FAINNLSSLIELNASNNVIELLPDSICYLS---NLKKLNLNN 673
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N L+ + S+ + L +L + L N + S+ SF ++ I N + Y
Sbjct: 674 NNLKELPSNIGF-LTKLVDLQLYNNQISSLPI-SFLKCRSIREIGTDGNPLPSYYHLGIK 731
Query: 385 NLPNLVK---LDLQDNKLKDFNLNVFSN-ITSKQTPMNLNLSNNYITNLYEN 432
+ +K DL D L + + S+ I +Q P+ L NYI + N
Sbjct: 732 AIRYHIKNPDCDLDD--LNSISPTIDSSTIEQQQQPIQLFGGGNYIDSSNNN 781
Score = 55 (24.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 43 NSKLRELEITGKDLKFIDPSAFDNIDAC--YDLTLKITNTQIEELPSGLFDKIENIEQMT 100
NS EL+++ ++L P FD + Y + + ++ I+ +P F I N+EQ+
Sbjct: 384 NSSSTELDLSEQELNEF-P-IFDEKEIVQGYKI-IDLSFNNIKSIPLDAFTNISNLEQLI 440
Query: 101 LDLSHNKLSVLNMATLYSNVTKLQHLGTTIL 131
+ +N N++ + S++ L+HL TIL
Sbjct: 441 M--FNN-----NLSDVPSSIEFLKHL--TIL 462
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 171 (65.3 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 85/313 (27%), Positives = 135/313 (43%)
Query: 274 NNNIKNIRNYSLYNLTS-----LNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
NNNI + R L + + + I LE N I I F + +K+LK I LS N +
Sbjct: 279 NNNIVDCRRKGLTEIPANLPEGIVEIRLEQNMIKNIPAGAF--STYKKLKRIDLSKNQIS 336
Query: 329 LIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPN 388
I D F L+ L ++ L N + I F L ++ ++L+ N+I + N F +L N
Sbjct: 337 EIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQN 396
Query: 389 LVKLDLQDNKLKDFNLNVFSNITS------KQTPMNLNLSNNYITN-LYENDKKQAPIYI 441
L L L DNKL+ + +F+ + + Q P + ++ + L++N + +
Sbjct: 397 LNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARC 456
Query: 442 KS-LDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
L+N RI +V F T A+ R L F +L E E
Sbjct: 457 SHPRRLANKRISQVKGKKFRCTGAEDYRS---------RLSGECFQDLVCPERCRCEGTV 507
Query: 500 IAVV-VKRTFIGMPNL--QIIDLSFN--EISMLTGEQFYFSF-KLRILNISHNRLRSLPR 553
+ +K T I P+L DL N EIS+L + LR +N+S+N+LR +
Sbjct: 508 VDCSNLKLTKIP-PHLPEHTTDLRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIRE 566
Query: 554 DVFSNT--IIEKL 564
F ++E L
Sbjct: 567 GAFDGAGGVLELL 579
Score = 169 (64.5 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 48/157 (30%), Positives = 83/157 (52%)
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
E L +D NNI I L +L ++LE N+IS I F + K+L+ IRL+ N L
Sbjct: 55 ERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFE-GL-KQLERIRLNRNRL 112
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+++ F + +L+ + LS N ++++ +F+ + + N+ L N I I AF L
Sbjct: 113 QVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALR 172
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+L L L +N + L+ F+++ +T + L+ SNN
Sbjct: 173 DLEILTLNNNNITLIPLSSFNHMPKLRT-LRLH-SNN 207
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/161 (26%), Positives = 79/161 (49%)
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
N +LDL N + FS + + + L+L NN I+ + E + ++ + L+
Sbjct: 53 NAERLDLDRNNITRITKVDFSGLKNLRV---LHLENNQIS-VIERGAFEGLKQLERIRLN 108
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
NR+Q +P Q+ L +L L N+I+ + AF + ++ L L+ N+I+ +
Sbjct: 109 RNRLQVLPELLFQS-TTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGA 167
Query: 508 FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
F + +L+I+ L+ N I+++ F KLR L + N L
Sbjct: 168 FRALRDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNL 208
Score = 138 (53.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 46/168 (27%), Positives = 80/168 (47%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
I + + + L N + I F LK L + L N + I+ +F+ L + I L+
Sbjct: 50 IPRNAERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNR 109
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N+++ + F + L +LDL +N+++ F IT T NL L +N+I+ + E+
Sbjct: 110 NRLQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGIT---TVKNLQLDSNHISCI-ED 165
Query: 433 DKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
+A ++ L L+NN I +P++ LR L L N + H D
Sbjct: 166 GAFRALRDLEILTLNNNNITLIPLSSFNHMP-KLRTLRLHSNNL-HCD 211
Score = 134 (52.2 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 85/359 (23%), Positives = 144/359 (40%)
Query: 199 KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKL-QLLEISFSLFNSNEFPY 257
K+T + +L H +L+ L+ N++ I+E F+KL L +I+ S +
Sbjct: 514 KLTKIPPHLPEHTTDLR---LNDNEISILEATG----AFKKLPNLRKINLSNNKLRDIRE 566
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ LE L + N ++++ L L + L N+IS + N F RL
Sbjct: 567 GAFDGAGGVLE-LLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRL 625
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L +N + I F L L+TI NLL + ++ + L + +
Sbjct: 626 --LSLYDNRISTIAPGAFNTLHSLSTI----NLLSNPYVCDC----HLAWLGLWLKKTRV 675
Query: 378 IYPNAFVNLPNLVK-LDLQDNKLKDFNLN-VFSNI---TSKQTPMNLNLSNNYI--TNL- 429
+ N P +K + +QD + DF+ + N+ ++ + P + S + +N
Sbjct: 676 VSGNPRCQKPAFLKEIPIQDVAMPDFSCDGAEENVCLPSAPRCPESCTCSETVVRCSNRG 735
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
+ K P L L N + VP L L L N I HL F N+
Sbjct: 736 LRSLPKTIPKDTTELYLEGNLLTSVPKELPNL--KQLTLLDLSNNSISHLAPLTFSNMTQ 793
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L L L +N I V F G+ +L+++ L N++S + F L L + N L
Sbjct: 794 LATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGANPL 852
Score = 134 (52.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 33/103 (32%), Positives = 56/103 (54%)
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+L LD N I + F L L +L LE+N I+V+ + F G+ L+ I L+ N + +L
Sbjct: 56 RLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVL 115
Query: 528 TGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLDISYN 569
F + KL L++S N+++++PR F T ++ L + N
Sbjct: 116 PELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSN 158
Score = 128 (50.1 bits), Expect = 0.00032, P = 0.00032
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
E L L+ NNI + K F G+ NL+++ L N+IS++ F +L + ++ NRL+
Sbjct: 55 ERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQV 114
Query: 551 LPRDVF-SNTIIEKLDISYNQDKIRP 575
LP +F S T + +LD+S NQ + P
Sbjct: 115 LPELLFQSTTKLSRLDLSENQIQAVP 140
Score = 123 (48.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L L ++NN I I + L L I L N++ + LF +L + LS
Sbjct: 75 LKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTT--KLSRLDLS 132
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N ++ + F + + + L N + I+ +F+ L ++ + L+ N I I ++F
Sbjct: 133 ENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITLIPLSSF 192
Query: 384 VNLPNLVKLDLQDNKLK-DFNLNVFSN 409
++P L L L N L D +L+ S+
Sbjct: 193 NHMPKLRTLRLHSNNLHCDCHLSWLSD 219
Score = 113 (44.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 43/155 (27%), Positives = 74/155 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLE-ISFSLFNSNEFP 256
N IT + F L NL+ L L N++ +IE + FE L+ LE I + P
Sbjct: 62 NNITRITKVDFSGLKNLRVLHLENNQISVIERGA-----FEGLKQLERIRLNRNRLQVLP 116
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+L ++ L L + N I+ + + +T++ + L+ N IS I + F +
Sbjct: 117 E-LLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFR--ALRD 173
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLL 351
L+ + L+NN + LI +F ++ +L T+ L N L
Sbjct: 174 LEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNL 208
Score = 107 (42.7 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKR 506
SN ++ +P +T +LYL+ N + + NL L LL L +N+I+ +
Sbjct: 732 SNRGLRSLP----KTIPKDTTELYLEGNLLTSVPKE-LPNLKQLTLLDLSNNSISHLAPL 786
Query: 507 TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN-TIIEKLD 565
TF M L + LS+N+I + F LR+L + N L ++P F++ T + L
Sbjct: 787 TFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLA 846
Query: 566 ISYN 569
+ N
Sbjct: 847 LGAN 850
Score = 106 (42.4 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAF-GNLDVLELLSLE 496
P + L L++N I + +LRK+ L N+++ + AF G VLELL L
Sbjct: 523 PEHTTDLRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELL-LT 581
Query: 497 HNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
N + V R F G+ L+ + L N+IS + F +R+L++ NR+ ++ F
Sbjct: 582 GNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAF 641
Query: 557 SNTI 560
NT+
Sbjct: 642 -NTL 644
Score = 104 (41.7 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
+ ++ N IKNI + L I+L N+IS+I + F + + L + L N +
Sbjct: 304 IRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFS-GL-RSLTSLVLYGNKIAE 361
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
I F L L + L+ N + ++ +FK+L N+ + L N+++ I F L +
Sbjct: 362 IPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAI 421
Query: 390 VKLDLQDN 397
L L N
Sbjct: 422 KTLHLAQN 429
Score = 81 (33.6 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 36/130 (27%), Positives = 61/130 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN--EF 255
N I ++ F L+ + LS N QI E+ D F L+ L S L+ + E
Sbjct: 309 NMIKNIPAGAFSTYKKLKRIDLSKN--QISEIAE---DAFSGLRSLT-SLVLYGNKIAEI 362
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
P + + L +L+ L ++ N I +R + +L +LN ++L NK+ I LF +
Sbjct: 363 PKGLFD-GLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFA--PLR 419
Query: 316 RLKEIRLSNN 325
+K + L+ N
Sbjct: 420 AIKTLHLAQN 429
Score = 80 (33.2 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 40 GIFNS--KLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIE 97
G F++ KL+ ++++ + I AF + + L L +I E+P GLFD + ++
Sbjct: 317 GAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLY--GNKIAEIPKGLFDGLVSL- 373
Query: 98 QMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDRE 135
Q+ L L+ NK++ L + T LQ+L L D +
Sbjct: 374 QLLL-LNANKINCLRVNTFKD----LQNLNLLSLYDNK 406
Score = 71 (30.1 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 27/127 (21%), Positives = 66/127 (51%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL-QGIFNS--KLRELEITGKDLKFI 59
L L +N++SV+ + + +L+ + + L + +F S KL L+++ ++ +
Sbjct: 81 LHLENNQISVIERGA-FEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSENQIQAV 139
Query: 60 DPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSN 119
AF I +L L + I + G F + ++E +TL+ +N ++++ +++ +++
Sbjct: 140 PRKAFRGITTVKNLQLD--SNHISCIEDGAFRALRDLEILTLN--NNNITLIPLSS-FNH 194
Query: 120 VTKLQHL 126
+ KL+ L
Sbjct: 195 MPKLRTL 201
Score = 67 (28.6 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
NKI L N F+ L NL LSL NKLQ I + +F ++ L ++ + F
Sbjct: 381 NKINCLRVNTFKDLQNLNLLSLYDNKLQTI--SKGLFAPLRAIKTLHLAQNPF 431
Score = 59 (25.8 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 26/102 (25%), Positives = 47/102 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ D+ F + EL L+ NKLQ + + +F L+ L + + + +
Sbjct: 559 NKLRDIREGAFDGAGGVLELLLTGNKLQSV--SGRMFKGLIGLKTLMLRSNQISCVDNAT 616
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYN 299
+ L+++ L++ +N I I + L SL+ INL N
Sbjct: 617 FT---GLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSN 655
Score = 56 (24.8 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 23/95 (24%), Positives = 40/95 (42%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHL---GTTIL 131
+++ I+ +P+G F + +++ +DLS N++S + +S + L L G I
Sbjct: 304 IRLEQNMIKNIPAGAFSTYKKLKR--IDLSKNQISEI-AEDAFSGLRSLTSLVLYGNKIA 360
Query: 132 ---KDREKXXXXXXXXXXRCNKITDLNGNLFRHLQ 163
K NKI L N F+ LQ
Sbjct: 361 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQ 395
Score = 54 (24.1 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 22/108 (20%), Positives = 47/108 (43%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQ--HLGT---TILKGDQLQGIFNSKLRELEITGKDLK 57
LDL N ++ + +S + L+ HL ++++ +G+ +L + + L+
Sbjct: 57 LDLDRNNITRITKVD-FSGLKNLRVLHLENNQISVIERGAFEGL--KQLERIRLNRNRLQ 113
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
+ F + L L + QI+ +P F I ++ + LD +H
Sbjct: 114 VLPELLFQSTTKLSRLDL--SENQIQAVPRKAFRGITTVKNLQLDSNH 159
Score = 38 (18.4 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
R N+I+ ++ F L +++ LSL N++ I F+ L + +
Sbjct: 605 RSNQISCVDNATFTGLSSVRLLSLYDNRISTIA--PGAFNTLHSLSTINL 652
>RGD|1308146 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C. elegans)"
species:10116 "Rattus norvegicus" [GO:0000164 "protein phosphatase
type 1 complex" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0019903 "protein phosphatase binding" evidence=IEA;ISO;ISS]
[GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA;ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 RGD:1308146 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 HOVERGEN:HBG055661 OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:BC079032 IPI:IPI00464721
RefSeq:NP_001013173.1 UniGene:Rn.156055 ProteinModelPortal:Q6AYI5
PRIDE:Q6AYI5 GeneID:309548 KEGG:rno:309548 UCSC:RGD:1308146
InParanoid:Q6AYI5 NextBio:660958 ArrayExpress:Q6AYI5
Genevestigator:Q6AYI5 Uniprot:Q6AYI5
Length = 582
Score = 217 (81.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 98/373 (26%), Positives = 180/373 (48%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
R N+IT + ++ R+L L LS+ NK++ +L + ++ E L+ + +
Sbjct: 200 RFNRITAVEKDV-RNLPRLSTLSIRENKIK--QLPA---EIGELCNLITLDVAHNQLEHL 253
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
P I N + L + +N + ++ + ++ NL+SLN + L YN++S I +L +
Sbjct: 254 PKEI--GNCTQITNLDLQHNELLDLPD-TIGNLSSLNRLGLRYNRLSAIPRSLAKCSA-- 308
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+E+ L NN + + +L +LN++TL+ N + + + ++ + N+I
Sbjct: 309 -LEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
I F L KL+++DN+L L+ F TS + LNL+ N +T + E+
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM---VELNLATNQLTKIPED--V 421
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+ ++ L LSNN ++++P + L LR+L L+ N+++ L L L+ L L
Sbjct: 422 SGLVSLEVLILSNNLLKKLP-HGLGNLR-KLRELDLEENKLESLP-NEIAYLKDLQKLVL 478
Query: 496 EHNNIAVVVKRTFIG-MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN-RLRSLPR 553
+N + + + IG + NL + L N ++ L E+ L L ++ N L SLP
Sbjct: 479 TNNQLTTLPRG--IGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLP- 534
Query: 554 DVFSNTIIEKLDI 566
F + KL I
Sbjct: 535 --FELALCSKLSI 545
Score = 211 (79.3 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 79/321 (24%), Positives = 150/321 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L LA+ N++ ++ + SL NL L ++L +NK+ +I + ++ + L + L
Sbjct: 145 LVNLMTLALSENSLTSLPD-SLDNLKKLRMLDLRHNKLREIPSVVYRLD---SLTTLYLR 200
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N + +E D NL L+T+++ N +K + L N++ + ++ NQ++++ P
Sbjct: 201 FNRITAVEKDV-RNLPRLSTLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHL-PKEI 257
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
N + LDLQ N+L D + N++S L L N ++ + + K + + +
Sbjct: 258 GNCTQITNLDLQHNELLDLP-DTIGNLSSLN---RLGLRYNRLSAIPRSLAKCSAL--EE 311
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L+L NN I +P + L + L L L N + + L++EHN I +
Sbjct: 312 LNLENNNISTLPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKI 370
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
F L +++ N+++ L + ++ + LN++ N+L +P DV +E
Sbjct: 371 PFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE-LNLATNQLTKIPEDVSGLVSLEV 429
Query: 564 LDISYNQDKIRPGRESNPRPI 584
L +S N K P N R +
Sbjct: 430 LILSNNLLKKLPHGLGNLRKL 450
Score = 193 (73.0 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 102/391 (26%), Positives = 181/391 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ L + L NL L+LS N L + + D +KL++L++ + E P
Sbjct: 133 NKLQSLPAEV-GCLVNLMTLALSENSLTSLP---DSLDNLKKLRMLDLRHNKLR--EIPS 186
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN------NLFHF 311
+ L++L L + N I + + NL L+ +++ NKI ++ NL
Sbjct: 187 VVYR--LDSLTTLYLRFNRITAVEK-DVRNLPRLSTLSIRENKIKQLPAEIGELCNLITL 243
Query: 312 NI-HKRL----KEI----RLSN---NYLELIE-SDTFYNLKELNTITLSYNLLKSIKTTS 358
++ H +L KEI +++N + EL++ DT NL LN + L YN L +I S
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPR-S 302
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
+ + + L N I + P + L +LVKL+ F L + T +
Sbjct: 303 LAKCSALEELNLENNNISTL-PESL--LSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
LN+ +N I + +A + K L++ +N++ +P++F T+ S+ +L L N++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSK-LNMKDNQLTSLPLDF-GTWT-SMVELNLATNQLTK 416
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+ G L LE+L L NN+ + + L+ +DL N++ L E Y L
Sbjct: 417 IPEDVSG-LVSLEVLILS-NNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLK-DL 473
Query: 539 RILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
+ L +++N+L +LPR + T + L + N
Sbjct: 474 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504
Score = 188 (71.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 93/381 (24%), Positives = 170/381 (44%)
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
+ L L EL L NKLQ + + L+ ++ S + P + NL L
Sbjct: 120 KELTQLTELYLYSNKLQSLPAEVGCL-----VNLMTLALSENSLTSLPDSL--DNLKKLR 172
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNN------LFHFNIHK-RLKEIR 321
L + +N ++ I + +Y L SL + L +N+I+ + + L +I + ++K++
Sbjct: 173 MLDLRHNKLREIPSV-VYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLP 231
Query: 322 LSNNYL-ELIESDTFYNL-----KELNTIT------LSYNLLKSIKTTSFKNLNNMLNIV 369
L LI D +N KE+ T L +N L + T NL+++ +
Sbjct: 232 AEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDT-IGNLSSLNRLG 290
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L +N++ I P + L +L+L++N + ++ S++ + L L+ N L
Sbjct: 291 LRYNRLSAI-PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS---LTLARNCF-QL 345
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
Y I SL++ +NRI ++P A L KL + N++ L FG
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSR-AKVLSKLNMKDNQLTSLPLD-FGTWTS 403
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
+ L+L N + + + G+ +L+++ LS N + L KLR L++ N+L
Sbjct: 404 MVELNLATNQLTKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLR-KLRELDLEENKLE 461
Query: 550 SLPRDVFSNTIIEKLDISYNQ 570
SLP ++ ++KL ++ NQ
Sbjct: 462 SLPNEIAYLKDLQKLVLTNNQ 482
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 93/386 (24%), Positives = 165/386 (42%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNS-----KLRELEITGKDLK 57
LDL HNKL + S V +L L T L+ +++ + +L L I +K
Sbjct: 174 LDLRHNKLREIP-----SVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIK 228
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATL 116
+ P+ + C +TL + + Q+E LP +I N Q+T LDL HN+L L++
Sbjct: 229 QL-PAEIGEL--CNLITLDVAHNQLEHLPK----EIGNCTQITNLDLQHNEL--LDLPDT 279
Query: 117 YSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLN--GNLFRHLQKSIVKA--KKN 172
N++ L LG R +C+ + +LN N L +S++ + K N
Sbjct: 280 IGNLSSLNRLGL-----RYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLN 334
Query: 173 N---NNNEDQVSD--REKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQII 227
+ N Q+ N+I + +F L +L++ N+L +
Sbjct: 335 SLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN 287
L+ + ++E++ + + P + L +LE L + NN +K + + L N
Sbjct: 395 PLDFGTWT-----SMVELNLATNQLTKIPEDV--SGLVSLEVLILSNNLLKKLP-HGLGN 446
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
L L ++LE NK+ + N + + K L+++ L+NN L + + L L + L
Sbjct: 447 LRKLRELDLEENKLESLPNEIAYL---KDLQKLVLTNNQLTTLPRGIGH-LTNLTHLGLG 502
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFN 373
NLL + L N+ + L+ N
Sbjct: 503 ENLLTHLPE-EIGTLENLEELYLNDN 527
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 121/498 (24%), Positives = 217/498 (43%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNK 107
L+++ + + + PS + LT L + + +++ LP+ + + N+ MTL LS N
Sbjct: 105 LDLSKRSIHILPPS----VKELTQLTELYLYSNKLQSLPAEV-GCLVNL--MTLALSENS 157
Query: 108 LSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIV 167
L+ ++ N+ KL+ L K RE R + +T L R + + V
Sbjct: 158 LT--SLPDSLDNLKKLRMLDLRHNKLRE-----IPSVVYRLDSLTTL---YLRFNRITAV 207
Query: 168 KAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKIT-DLNGNLFRHL-------YNLQELS 218
+ N +S RE K CN IT D+ N HL + L
Sbjct: 208 EKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLD 267
Query: 219 LSFNKL-----QIIELNS-NVFDV-FEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
L N+L I L+S N + + +L + S + ++ E + N N++TL
Sbjct: 268 LQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALE-ELNLENNNISTLPESL 326
Query: 272 MDN----NNIKNIRN-YSLY------NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEI 320
+ + N++ RN + LY +++ +N+E+N+I+KI +F + K L ++
Sbjct: 327 LSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF--SRAKVLSKL 384
Query: 321 RLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ +N L + D T+ ++ ELN T N L I L ++ ++LS N +K +
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLAT---NQLTKIPE-DVSGLVSLEVLILSNNLLKKL 440
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
P+ NL L +LDL++NKL+ N + + Q L L+NN +T L
Sbjct: 441 -PHGLGNLRKLRELDLEENKLESLP-NEIAYLKDLQ---KLVLTNNQLTTLPRGIGHLTN 495
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+ L L N + +P + T ++L +LYL+ N H L ++S+E+
Sbjct: 496 L--THLGLGENLLTHLPEE-IGTL-ENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
Query: 499 NIAVVVKRTFIGMPNLQI 516
++ + + G P+ I
Sbjct: 552 PLSHLPPQIVAGGPSFII 569
Score = 158 (60.7 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 92/396 (23%), Positives = 178/396 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T L +L +L L+ L L NKL+ E+ S V+ + + L L + F+ + E
Sbjct: 156 NSLTSLPDSL-DNLKKLRMLDLRHNKLR--EIPSVVYRL-DSLTTLYLRFNRITAVEKDV 211
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+NL L L++ N IK + + L +L +++ +N++ + + + ++
Sbjct: 212 ----RNLPRLSTLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPKEIGNCT---QI 263
Query: 318 KEIRLSNNYLELIE-SDTFYNLKELNTITLSYNLLKSI-----KTTSFKNLN-------- 363
+ L +N EL++ DT NL LN + L YN L +I K ++ + LN
Sbjct: 264 TNLDLQHN--ELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNIST 321
Query: 364 ---NMLNIVLSFNQIKY------IYP-NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
++L+ ++ N + +YP + L+++ N++ +FS
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRA--- 378
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
+ LN+ +N +T+L + + L+L+ N++ ++P + SL L L
Sbjct: 379 KVLSKLNMKDNQLTSLPLDFGTWTSMV--ELNLATNQLTKIPEDVSGLV--SLEVLILSN 434
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N +K L GNL L L LE N + + + +LQ + L+ N+++ L +
Sbjct: 435 NLLKKLPH-GLGNLRKLRELDLEENKLESLPNEIAY-LKDLQKLVLTNNQLTTLPRGIGH 492
Query: 534 FSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
+ L L + N L LP ++ + +E+L ++ N
Sbjct: 493 LT-NLTHLGLGENLLTHLPEEIGTLENLEELYLNDN 527
>UNIPROTKB|E2R260 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AAEX03015529 RefSeq:XP_535013.2
ProteinModelPortal:E2R260 Ensembl:ENSCAFT00000017230 GeneID:477819
KEGG:cfa:477819 NextBio:20853238 Uniprot:E2R260
Length = 582
Score = 217 (81.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 132/541 (24%), Positives = 238/541 (43%)
Query: 44 SKLRELEITGKDLKF--IDPSAFD-NIDACYDLTLKITN----TQIEELPSGLFDKIENI 96
SK +E + GKD K D SA + D T+K N T+ + + + ++
Sbjct: 38 SKEKEPKTKGKDAKDGKKDSSAAQPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKC 97
Query: 97 EQ---MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKIT- 152
+ M LDLS + +L S++ +L L T + K N +T
Sbjct: 98 REENSMRLDLSKRSIHILP-----SSIKELTQL-TELYLYSNKLQSLPAEVGCLVNLMTL 151
Query: 153 DLNGNLFRHLQKSIVKAKKNN-----NNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNL 207
LN N L S+ KK +N ++ R N+IT + ++
Sbjct: 152 ALNENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
++L L LS+ NK++ +L + ++ E L+ + + P I N +
Sbjct: 212 -KNLSKLSMLSIRENKIK--QLPA---EIGELCNLITLDVAHNQLEHLPKEI--GNCTQI 263
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
L + +N + ++ + ++ NL+SL+ + L YN++S I +L + L+E+ L NN +
Sbjct: 264 TNLDLQHNELLDLPD-TIGNLSSLSRLGLRYNRLSAIPRSLAKCSA---LEELNLENNNI 319
Query: 328 ELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP 387
+ +L +LN++TL+ N + + + ++ + N+I I F
Sbjct: 320 SALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAK 379
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
L KL+++DN+L L+ F TS + LNL+ N +T + E+ + ++ L LS
Sbjct: 380 VLSKLNMKDNQLTSLPLD-FGTWTSM---VELNLATNQLTKIPED--VSGLVSLEVLILS 433
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
NN ++++P + L LR+L L+ N+++ L L L+ L L +N + + +
Sbjct: 434 NNLLKKLP-HGLGNLR-KLRELDLEENKLESLP-NEIAYLKDLQKLVLTNNQLTTLPRG- 489
Query: 508 FIG-MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN-RLRSLPRDVFSNTIIEKLD 565
IG + NL + L N ++ L E+ L L ++ N L SLP F + KL
Sbjct: 490 -IGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLP---FELALCSKLS 544
Query: 566 I 566
I
Sbjct: 545 I 545
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 78/321 (24%), Positives = 151/321 (47%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L LA++ N++ ++ + SL NL L ++L +NK+ +I + ++ + L + L
Sbjct: 145 LVNLMTLALNENSLTSLPD-SLDNLKKLRMLDLRHNKLREIPSVVYRLD---SLTTLYLR 200
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N + +E D NL +L+ +++ N +K + L N++ + ++ NQ++++ P
Sbjct: 201 FNRITTVEKD-IKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHL-PKEI 257
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
N + LDLQ N+L D + N++S L L N ++ + + K + + +
Sbjct: 258 GNCTQITNLDLQHNELLDLP-DTIGNLSSLS---RLGLRYNRLSAIPRSLAKCSAL--EE 311
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L+L NN I +P + L + L L L N + + L++EHN I +
Sbjct: 312 LNLENNNISALPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKI 370
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
F L +++ N+++ L + ++ + LN++ N+L +P DV +E
Sbjct: 371 PFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE-LNLATNQLTKIPEDVSGLVSLEV 429
Query: 564 LDISYNQDKIRPGRESNPRPI 584
L +S N K P N R +
Sbjct: 430 LILSNNLLKKLPHGLGNLRKL 450
Score = 192 (72.6 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 100/391 (25%), Positives = 182/391 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ L + L NL L+L+ N L + + D +KL++L++ + E P
Sbjct: 133 NKLQSLPAEV-GCLVNLMTLALNENSLTSLP---DSLDNLKKLRMLDLRHNKLR--EIPS 186
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN------NLFHF 311
+ L++L L + N I + + NL+ L+ +++ NKI ++ NL
Sbjct: 187 VVYR--LDSLTTLYLRFNRITTVEK-DIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243
Query: 312 NI-HKRL----KEI----RLSN---NYLELIE-SDTFYNLKELNTITLSYNLLKSIKTTS 358
++ H +L KEI +++N + EL++ DT NL L+ + L YN L +I S
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR-S 302
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
+ + + L N I + P + L +LVKL+ F L + T +
Sbjct: 303 LAKCSALEELNLENNNISAL-PESL--LSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
LN+ +N I + +A + K L++ +N++ +P++F T+ S+ +L L N++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSK-LNMKDNQLTSLPLDF-GTWT-SMVELNLATNQLTK 416
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+ G L LE+L L NN+ + + L+ +DL N++ L E Y L
Sbjct: 417 IPEDVSG-LVSLEVLILS-NNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLK-DL 473
Query: 539 RILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
+ L +++N+L +LPR + T + L + N
Sbjct: 474 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504
Score = 187 (70.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 92/381 (24%), Positives = 169/381 (44%)
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
+ L L EL L NKLQ + + L+ ++ + + P + NL L
Sbjct: 120 KELTQLTELYLYSNKLQSLPAEVGCL-----VNLMTLALNENSLTSLPDSL--DNLKKLR 172
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN---NLFHFNI----HKRLKEIR 321
L + +N ++ I + +Y L SL + L +N+I+ + NL ++ ++K++
Sbjct: 173 MLDLRHNKLREIPSV-VYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLP 231
Query: 322 LSNNYL-ELIESDTFYNL-----KELNTIT------LSYNLLKSIKTTSFKNLNNMLNIV 369
L LI D +N KE+ T L +N L + T NL+++ +
Sbjct: 232 AEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDT-IGNLSSLSRLG 290
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L +N++ I P + L +L+L++N + ++ S++ + L L+ N L
Sbjct: 291 LRYNRLSAI-PRSLAKCSALEELNLENNNISALPESLLSSLVKLNS---LTLARNCF-QL 345
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
Y I SL++ +NRI ++P A L KL + N++ L FG
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSR-AKVLSKLNMKDNQLTSLPLD-FGTWTS 403
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
+ L+L N + + + G+ +L+++ LS N + L KLR L++ N+L
Sbjct: 404 MVELNLATNQLTKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLR-KLRELDLEENKLE 461
Query: 550 SLPRDVFSNTIIEKLDISYNQ 570
SLP ++ ++KL ++ NQ
Sbjct: 462 SLPNEIAYLKDLQKLVLTNNQ 482
Score = 176 (67.0 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 97/383 (25%), Positives = 169/383 (44%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFN-SKLRELEITGKDLK 57
LDL HNKL + S V +L L T L+ +++ + I N SKL L I +K
Sbjct: 174 LDLRHNKLREIP-----SVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIK 228
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATL 116
+ P+ + C +TL + + Q+E LP +I N Q+T LDL HN+L L++
Sbjct: 229 QL-PAEIGEL--CNLITLDVAHNQLEHLPK----EIGNCTQITNLDLQHNEL--LDLPDT 279
Query: 117 YSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLN--GNLFRHLQKSIVKA--KKN 172
N++ L LG R +C+ + +LN N L +S++ + K N
Sbjct: 280 IGNLSSLSRLGL-----RYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLN 334
Query: 173 N---NNNEDQVSD--REKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQII 227
+ N Q+ N+I + +F L +L++ N+L +
Sbjct: 335 SLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN 287
L+ + ++E++ + + P + L +LE L + NN +K + + L N
Sbjct: 395 PLDFGTWT-----SMVELNLATNQLTKIPEDV--SGLVSLEVLILSNNLLKKLP-HGLGN 446
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
L L ++LE NK+ + N + + K L+++ L+NN L + + L L + L
Sbjct: 447 LRKLRELDLEENKLESLPNEIAYL---KDLQKLVLTNNQLTTLPRGIGH-LTNLTHLGLG 502
Query: 348 YNLLKSI--KTTSFKNLNNM-LN 367
NLL + + + +NL + LN
Sbjct: 503 ENLLTHLPEEIGTLENLEELYLN 525
Score = 160 (61.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 92/396 (23%), Positives = 179/396 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T L +L +L L+ L L NKL+ E+ S V+ + + L L + F+ + E
Sbjct: 156 NSLTSLPDSL-DNLKKLRMLDLRHNKLR--EIPSVVYRL-DSLTTLYLRFNRITTVEKDI 211
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
KNL+ L L++ N IK + + L +L +++ +N++ + + + ++
Sbjct: 212 ----KNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPKEIGNCT---QI 263
Query: 318 KEIRLSNNYLELIE-SDTFYNLKELNTITLSYNLLKSI-----KTTSFKNLN-------- 363
+ L +N EL++ DT NL L+ + L YN L +I K ++ + LN
Sbjct: 264 TNLDLQHN--ELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISA 321
Query: 364 ---NMLNIVLSFNQIKY------IYP-NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSK 413
++L+ ++ N + +YP + L+++ N++ +FS
Sbjct: 322 LPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRA--- 378
Query: 414 QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF 473
+ LN+ +N +T+L + + L+L+ N++ ++P + SL L L
Sbjct: 379 KVLSKLNMKDNQLTSLPLDFGTWTSMV--ELNLATNQLTKIPEDVSGLV--SLEVLILSN 434
Query: 474 NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFY 533
N +K L GNL L L LE N + + + +LQ + L+ N+++ L +
Sbjct: 435 NLLKKLPH-GLGNLRKLRELDLEENKLESLPNEIAY-LKDLQKLVLTNNQLTTLPRGIGH 492
Query: 534 FSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
+ L L + N L LP ++ + +E+L ++ N
Sbjct: 493 LT-NLTHLGLGENLLTHLPEEIGTLENLEELYLNDN 527
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 115/497 (23%), Positives = 216/497 (43%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L+++ + + + PS+ + +L L + +++ LP+ + + N+ MTL L+ N L
Sbjct: 105 LDLSKRSIHIL-PSSIKELTQLTELYLY--SNKLQSLPAEV-GCLVNL--MTLALNENSL 158
Query: 109 SVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
+ ++ N+ KL+ L K RE R + +T L R + + V+
Sbjct: 159 T--SLPDSLDNLKKLRMLDLRHNKLRE-----IPSVVYRLDSLTTL---YLRFNRITTVE 208
Query: 169 AKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKIT-DLNGNLFRHL-------YNLQELSL 219
N + +S RE K CN IT D+ N HL + L L
Sbjct: 209 KDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDL 268
Query: 220 SFNKL-QIIELNSNVFDV------FEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N+L + + N+ + + +L + S + ++ E + N N++ L +
Sbjct: 269 QHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALE-ELNLENNNISALPESLL 327
Query: 273 DN----NNIKNIRN-YSLY------NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+ N++ RN + LY +++ +N+E+N+I+KI +F + K L ++
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF--SRAKVLSKLN 385
Query: 322 LSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ +N L + D T+ ++ ELN T N L I L ++ ++LS N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLAT---NQLTKIPE-DVSGLVSLEVLILSNNLLKKL- 440
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPI 439
P+ NL L +LDL++NKL+ N + + Q L L+NN +T L +
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLP-NEIAYLKDLQ---KLVLTNNQLTTLPRGIGHLTNL 496
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
L L N + +P + T ++L +LYL+ N H L ++S+E+
Sbjct: 497 --THLGLGENLLTHLPEE-IGTL-ENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCP 552
Query: 500 IAVVVKRTFIGMPNLQI 516
++ + + G P+ I
Sbjct: 553 LSHLPPQIVAGGPSFII 569
>MGI|MGI:1927197 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C.
elegans)" species:10090 "Mus musculus" [GO:0000164 "protein
phosphatase type 1 complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019903
"protein phosphatase binding" evidence=ISO] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068921 MGI:MGI:1927197 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 CTD:8036 HOVERGEN:HBG055661
OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38 EMBL:DQ479926
EMBL:AK077798 EMBL:AK146447 EMBL:BC013722 EMBL:BC049775
EMBL:BC083060 IPI:IPI00131754 RefSeq:NP_001161977.1
RefSeq:NP_062632.2 UniGene:Mm.228669 ProteinModelPortal:O88520
SMR:O88520 IntAct:O88520 STRING:O88520 PhosphoSite:O88520
PaxDb:O88520 PRIDE:O88520 Ensembl:ENSMUST00000025932
Ensembl:ENSMUST00000169861 GeneID:56392 KEGG:mmu:56392
UCSC:uc008hxg.2 InParanoid:Q91VH8 NextBio:312492 Bgee:O88520
CleanEx:MM_SHOC2 Genevestigator:O88520
GermOnline:ENSMUSG00000024976 Uniprot:O88520
Length = 582
Score = 217 (81.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 97/373 (26%), Positives = 182/373 (48%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
R N+IT + ++ ++L L LS+ NK++ +L + ++ E L+ + +
Sbjct: 200 RFNRITTVEKDI-KNLPKLSMLSIRENKIK--QLPA---EIGELCNLITLDVAHNQLEHL 253
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
P I N + L + +N++ ++ + ++ NL+SLN + L YN++S I +L +
Sbjct: 254 PKEI--GNCTQITNLDLQHNDLLDLPD-TIGNLSSLNRLGLRYNRLSAIPRSLAKCSA-- 308
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+E+ L NN + + +L +LN++TL+ N + + + ++ + N+I
Sbjct: 309 -LEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
I F L KL+++DN+L L+ F TS + LNL+ N +T + E+
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM---VELNLATNQLTKIPED--V 421
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+ ++ L LSNN ++++P + L LR+L L+ N+++ L L L+ L L
Sbjct: 422 SGLVSLEVLILSNNLLKKLP-HGLGNLR-KLRELDLEENKLESLP-NEIAYLKDLQKLVL 478
Query: 496 EHNNIAVVVKRTFIG-MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN-RLRSLPR 553
+N ++ + + IG + NL + L N ++ L E+ L L ++ N L SLP
Sbjct: 479 TNNQLSTLPRG--IGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLP- 534
Query: 554 DVFSNTIIEKLDI 566
F + KL I
Sbjct: 535 --FELALCSKLSI 545
Score = 204 (76.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 78/321 (24%), Positives = 149/321 (46%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L L LA+ N++ ++ + SL NL L ++L +NK+ +I + ++ + L + L
Sbjct: 145 LVNLMTLALSENSLTSLPD-SLDNLKKLRMLDLRHNKLREIPSVVYRLD---SLTTLYLR 200
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N + +E D NL +L+ +++ N +K + L N++ + ++ NQ++++ P
Sbjct: 201 FNRITTVEKD-IKNLPKLSMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHL-PKEI 257
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
N + LDLQ N L D + N++S L L N ++ + + K + + +
Sbjct: 258 GNCTQITNLDLQHNDLLDLP-DTIGNLSSLN---RLGLRYNRLSAIPRSLAKCSAL--EE 311
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L+L NN I +P + L + L L L N + + L++EHN I +
Sbjct: 312 LNLENNNISTLPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKI 370
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
F L +++ N+++ L + ++ + LN++ N+L +P DV +E
Sbjct: 371 PFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE-LNLATNQLTKIPEDVSGLVSLEV 429
Query: 564 LDISYNQDKIRPGRESNPRPI 584
L +S N K P N R +
Sbjct: 430 LILSNNLLKKLPHGLGNLRKL 450
Score = 195 (73.7 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 101/391 (25%), Positives = 181/391 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
NK+ L + L NL L+LS N L + + D +KL++L++ + E P
Sbjct: 133 NKLQSLPAEV-GCLVNLMTLALSENSLTSLP---DSLDNLKKLRMLDLRHNKLR--EIPS 186
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN------NLFHF 311
+ L++L L + N I + + NL L+ +++ NKI ++ NL
Sbjct: 187 VVYR--LDSLTTLYLRFNRITTVEK-DIKNLPKLSMLSIRENKIKQLPAEIGELCNLITL 243
Query: 312 NI-HKRL----KEI----RLSN---NYLELIE-SDTFYNLKELNTITLSYNLLKSIKTTS 358
++ H +L KEI +++N + +L++ DT NL LN + L YN L +I S
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPR-S 302
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
+ + + L N I + P + L +LVKL+ F L + T +
Sbjct: 303 LAKCSALEELNLENNNISTL-PESL--LSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
LN+ +N I + +A + K L++ +N++ +P++F T+ S+ +L L N++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSK-LNMKDNQLTSLPLDF-GTWT-SMVELNLATNQLTK 416
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+ G L LE+L L NN+ + + L+ +DL N++ L E Y L
Sbjct: 417 IPEDVSG-LVSLEVLILS-NNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLK-DL 473
Query: 539 RILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
+ L +++N+L +LPR + T + L + N
Sbjct: 474 QKLVLTNNQLSTLPRGIGHLTNLTHLGLGEN 504
Score = 187 (70.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 92/381 (24%), Positives = 171/381 (44%)
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
+ L L EL L NKLQ + + L+ ++ S + P + NL L
Sbjct: 120 KELTQLTELYLYSNKLQSLPAEVGCL-----VNLMTLALSENSLTSLPDSL--DNLKKLR 172
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF------NIHK-RLKEIR 321
L + +N ++ I + +Y L SL + L +N+I+ + ++ + +I + ++K++
Sbjct: 173 MLDLRHNKLREIPSV-VYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLP 231
Query: 322 LSNNYL-ELIESDTFYNL-----KELNTIT------LSYNLLKSIKTTSFKNLNNMLNIV 369
L LI D +N KE+ T L +N L + T NL+++ +
Sbjct: 232 AEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDT-IGNLSSLNRLG 290
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L +N++ I P + L +L+L++N + ++ S++ + L L+ N L
Sbjct: 291 LRYNRLSAI-PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS---LTLARNCF-QL 345
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDV 489
Y I SL++ +NRI ++P A L KL + N++ L FG
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSR-AKVLSKLNMKDNQLTSLPLD-FGTWTS 403
Query: 490 LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR 549
+ L+L N + + + G+ +L+++ LS N + L KLR L++ N+L
Sbjct: 404 MVELNLATNQLTKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLR-KLRELDLEENKLE 461
Query: 550 SLPRDVFSNTIIEKLDISYNQ 570
SLP ++ ++KL ++ NQ
Sbjct: 462 SLPNEIAYLKDLQKLVLTNNQ 482
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 96/386 (24%), Positives = 166/386 (43%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFN-SKLRELEITGKDLK 57
LDL HNKL + S V +L L T L+ +++ + I N KL L I +K
Sbjct: 174 LDLRHNKLREIP-----SVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIK 228
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATL 116
+ P+ + C +TL + + Q+E LP +I N Q+T LDL HN L L++
Sbjct: 229 QL-PAEIGEL--CNLITLDVAHNQLEHLPK----EIGNCTQITNLDLQHNDL--LDLPDT 279
Query: 117 YSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLN--GNLFRHLQKSIVKA--KKN 172
N++ L LG R +C+ + +LN N L +S++ + K N
Sbjct: 280 IGNLSSLNRLGL-----RYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLN 334
Query: 173 N---NNNEDQVSD--REKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQII 227
+ N Q+ N+I + +F L +L++ N+L +
Sbjct: 335 SLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN 287
L+ + ++E++ + + P + L +LE L + NN +K + + L N
Sbjct: 395 PLDFGTWT-----SMVELNLATNQLTKIPEDV--SGLVSLEVLILSNNLLKKLP-HGLGN 446
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
L L ++LE NK+ + N + + K L+++ L+NN L + + L L + L
Sbjct: 447 LRKLRELDLEENKLESLPNEIAYL---KDLQKLVLTNNQLSTLPRGIGH-LTNLTHLGLG 502
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFN 373
NLL + L N+ + L+ N
Sbjct: 503 ENLLTHLPE-EIGTLENLEELYLNDN 527
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 94/395 (23%), Positives = 176/395 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T L +L +L L+ L L NKL+ E+ S V+ + + L L + F+ + E
Sbjct: 156 NSLTSLPDSL-DNLKKLRMLDLRHNKLR--EIPSVVYRL-DSLTTLYLRFNRITTVEKDI 211
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
KNL L L++ N IK + + L +L +++ +N++ + + + ++
Sbjct: 212 ----KNLPKLSMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPKEIGNCT---QI 263
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI-----KTTSFKNLN--------- 363
+ L +N L L DT NL LN + L YN L +I K ++ + LN
Sbjct: 264 TNLDLQHNDL-LDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTL 322
Query: 364 --NMLNIVLSFNQIKY------IYP-NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
++L+ ++ N + +YP + L+++ N++ +FS +
Sbjct: 323 PESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRA---K 379
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
LN+ +N +T+L + + L+L+ N++ ++P + SL L L N
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGTWTSMV--ELNLATNQLTKIPEDVSGLV--SLEVLILSNN 435
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
+K L GNL L L LE N + + + +LQ + L+ N++S L +
Sbjct: 436 LLKKLPH-GLGNLRKLRELDLEENKLESLPNEIAY-LKDLQKLVLTNNQLSTLPRGIGHL 493
Query: 535 SFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
+ L L + N L LP ++ + +E+L ++ N
Sbjct: 494 T-NLTHLGLGENLLTHLPEEIGTLENLEELYLNDN 527
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 120/498 (24%), Positives = 216/498 (43%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSHNK 107
L+++ + + + PS + LT L + + +++ LP+ + + N+ MTL LS N
Sbjct: 105 LDLSKRSIHILPPS----VKELTQLTELYLYSNKLQSLPAEV-GCLVNL--MTLALSENS 157
Query: 108 LSVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIV 167
L+ ++ N+ KL+ L K RE R + +T L R + + V
Sbjct: 158 LT--SLPDSLDNLKKLRMLDLRHNKLRE-----IPSVVYRLDSLTTL---YLRFNRITTV 207
Query: 168 KAKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKIT-DLNGNLFRHL-------YNLQELS 218
+ N +S RE K CN IT D+ N HL + L
Sbjct: 208 EKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLD 267
Query: 219 LSFNKL-----QIIELNS-NVFDV-FEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLA 271
L N L I L+S N + + +L + S + ++ E + N N++TL
Sbjct: 268 LQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALE-ELNLENNNISTLPESL 326
Query: 272 MDN----NNIKNIRN-YSLY------NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEI 320
+ + N++ RN + LY +++ +N+E+N+I+KI +F + K L ++
Sbjct: 327 LSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF--SRAKVLSKL 384
Query: 321 RLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ +N L + D T+ ++ ELN T N L I L ++ ++LS N +K +
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLAT---NQLTKIPE-DVSGLVSLEVLILSNNLLKKL 440
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAP 438
P+ NL L +LDL++NKL+ N + + Q L L+NN ++ L
Sbjct: 441 -PHGLGNLRKLRELDLEENKLESLP-NEIAYLKDLQ---KLVLTNNQLSTLPRGIGHLTN 495
Query: 439 IYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHN 498
+ L L N + +P + T ++L +LYL+ N H L ++S+E+
Sbjct: 496 L--THLGLGENLLTHLPEE-IGTL-ENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
Query: 499 NIAVVVKRTFIGMPNLQI 516
++ + + G P+ I
Sbjct: 552 PLSHLPPQIVAGGPSFII 569
>MGI|MGI:2389173 [details] [associations]
symbol:Lrrtm1 "leucine rich repeat transmembrane neuronal 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007610 "behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0030426 "growth
cone" evidence=ISO] [GO:0035418 "protein localization to synapse"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO;IMP] [GO:0060076 "excitatory
synapse" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389173 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007610 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
GO:GO:0030426 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG OMA:EPDLFHG
EMBL:AY182025 EMBL:AK053345 EMBL:AK053364 EMBL:AK136857
EMBL:BC027803 IPI:IPI00170022 RefSeq:NP_083156.2 UniGene:Mm.292568
ProteinModelPortal:Q8K377 SMR:Q8K377 IntAct:Q8K377 STRING:Q8K377
PhosphoSite:Q8K377 PaxDb:Q8K377 PRIDE:Q8K377
Ensembl:ENSMUST00000020400 Ensembl:ENSMUST00000159616
Ensembl:ENSMUST00000161677 GeneID:74342 KEGG:mmu:74342
UCSC:uc009cjt.1 InParanoid:Q8K377 NextBio:340493 Bgee:Q8K377
CleanEx:MM_LRRTM1 Genevestigator:Q8K377
GermOnline:ENSMUSG00000060780 Uniprot:Q8K377
Length = 522
Score = 216 (81.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 68/260 (26%), Positives = 130/260 (50%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
NL+ L L++ N++ +R L L ++ L++N I + + F + +R+KE+ L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQ-KL-RRVKELTL 120
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S+N + + + TF + L ++ LSYN L+++ F L + + + N I+++
Sbjct: 121 SSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI 180
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F + +L LD+ N+LK N F+ + K T ++L N+ I + + + I +
Sbjct: 181 FQDCRSLKFLDIGYNQLKSLARNSFAGLF-KLTELHLE-HNDLIKVNFAHFPRL--ISLH 236
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
SL L N++ V V+ L + +L K+ L NEI++++ F + L+ L L+ N +
Sbjct: 237 SLCLRRNKVAIV-VSSLD-WVWNLEKMDLSGNEIEYMEPHVFETVPYLQTLQLDSNRLTY 294
Query: 503 VVKRTFIGMPNLQIIDLSFN 522
+ R +L I L+ N
Sbjct: 295 IEPRILNSWKSLTSITLAGN 314
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 65/237 (27%), Positives = 113/237 (47%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N L + + F L +L + L +N + S++ +F+ L + + LS NQI +
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELA 129
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAP 438
F +PNL +DL NKL+ ++F + T M N ++++ +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS--- 186
Query: 439 IYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+K LD+ N+++ + N F F L +L+L+ N++ ++ F L L L L
Sbjct: 187 --LKFLDIGYNQLKSLARNSFAGLF--KLTELHLEHNDLIKVNFAHFPRLISLHSLCLRR 242
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PR 553
N +A+VV + + NL+ +DLS NEI + F L+ L + NRL + PR
Sbjct: 243 NKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQTLQLDSNRLTYIEPR 298
Score = 187 (70.9 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/248 (25%), Positives = 122/248 (49%)
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
+NL+ L ++L YN +S++ F +L + L +N++ ++ D F L+ + +T
Sbjct: 62 HNLSGLLGLSLRYNSLSELRAG--QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELT 119
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N + + T+F+ + N+ ++ LS+N+++ + P+ F L L L ++ N ++ +
Sbjct: 120 LSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVR 179
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFAD 464
+F + S + L++ N + +L N A ++ + L L +N + + VNF F
Sbjct: 180 IFQDCRSLKF---LDIGYNQLKSLARNSF--AGLFKLTELHLEHNDL--IKVNFAH-FPR 231
Query: 465 --SLRKLYLDFNEIKHLDATAFGNLDV---LELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
SL L L N++ A +LD LE + L N I + F +P LQ + L
Sbjct: 232 LISLHSLCLRRNKV----AIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQTLQL 287
Query: 520 SFNEISML 527
N ++ +
Sbjct: 288 DSNRLTYI 295
Score = 170 (64.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 58/211 (27%), Positives = 106/211 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT+L FR + NL+ + LS+NKLQ L ++F KL L + N+ +F
Sbjct: 123 NQITELANTTFRPMPNLRSVDLSYNKLQA--LAPDLFHGLRKLTTLHMRA---NAIQFVP 177
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ ++ +L++L + N +K++ S L L ++LE+N + K+ N HF L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKV--NFAHFPRLISL 235
Query: 318 KEIRLSNNYLELIES--DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ L N + ++ S D +NL++++ LS N ++ ++ F+ + + + L N++
Sbjct: 236 HSLCLRRNKVAIVVSSLDWVWNLEKMD---LSGNEIEYMEPHVFETVPYLQTLQLDSNRL 292
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
YI P + +L + L N L D NV
Sbjct: 293 TYIEPRILNSWKSLTSITLAGN-LWDCGRNV 322
Score = 170 (64.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 67/268 (25%), Positives = 123/268 (45%)
Query: 210 HLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEW 269
+L L LSL +N L EL + F +L L + + S + + + L ++
Sbjct: 63 NLSGLLGLSLRYNSLS--ELRAGQFTGLMQLTWLYLDHNHICSVQGDAF---QKLRRVKE 117
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + +N I + N + + +L ++L YNK+ + +LFH + K L + + N ++
Sbjct: 118 LTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFH-GLRK-LTTLHMRANAIQF 175
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F + + L + + YN LKS+ SF L + + L N + I N F + P L
Sbjct: 176 VPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL--IKVN-FAHFPRL 232
Query: 390 VKLD---LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
+ L L+ NK+ V S++ ++LS N I + + + P Y+++L L
Sbjct: 233 ISLHSLCLRRNKVAI----VVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVP-YLQTLQL 287
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+NR+ + L ++ SL + L N
Sbjct: 288 DSNRLTYIEPRILNSWK-SLTSITLAGN 314
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + E+ T L LYLD N I + AF L ++ L+L N I +
Sbjct: 70 LSLRYNSLSELRAGQF-TGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITEL 128
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIE 562
TF MPNL+ +DLS+N++ L + F+ KL L++ N ++ +P +F + ++
Sbjct: 129 ANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLK 188
Query: 563 KLDISYNQDK 572
LDI YNQ K
Sbjct: 189 FLDIGYNQLK 198
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 47/164 (28%), Positives = 78/164 (47%)
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
NL L+ L L+ N L + F+ + L L +N+I ++ + D Q +K L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTW---LYLDHNHICSV-QGDAFQKLRRVKEL 118
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
LS+N+I E+ + + LR + L +N+++ L F L L L + N I V
Sbjct: 119 TLSSNQITELANTTFRPMPN-LRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVP 177
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
R F +L+ +D+ +N++ L F FKL L++ HN L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
>RGD|1585921 [details] [associations]
symbol:LRRTM1 "leucine rich repeat transmembrane neuronal 1"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426
"growth cone" evidence=IEA;ISO] [GO:0035418 "protein localization
to synapse" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050808 "synapse organization" evidence=ISO;IDA]
[GO:0060076 "excitatory synapse" evidence=IDA] [GO:0009986 "cell
surface" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
RGD:1585921 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0007610
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0060076 GO:GO:0035418 EMBL:CH473957
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OrthoDB:EOG4FN4HG
OMA:EPDLFHG IPI:IPI00364927 RefSeq:NP_001102844.1 UniGene:Rn.171424
PRIDE:D4A6D8 Ensembl:ENSRNOT00000007993 GeneID:679668
KEGG:rno:679668 UCSC:RGD:1585921 NextBio:716984 Uniprot:D4A6D8
Length = 523
Score = 216 (81.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 68/260 (26%), Positives = 130/260 (50%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
NL+ L L++ N++ +R L L ++ L++N I + + F + +R+KE+ L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQ-KL-RRVKELTL 120
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S+N + + + TF + L ++ LSYN L+++ F L + + + N I+++
Sbjct: 121 SSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI 180
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F + +L LD+ N+LK N F+ + K T ++L N+ I + + + I +
Sbjct: 181 FQDCRSLKFLDIGYNQLKSLARNSFAGLF-KLTELHLE-HNDLIKVNFAHFPRL--ISLN 236
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
SL L N++ V V+ L + +L K+ L NEI++++ F + L+ L L+ N +
Sbjct: 237 SLCLRRNKVAIV-VSSLD-WVWNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTY 294
Query: 503 VVKRTFIGMPNLQIIDLSFN 522
+ R +L I L+ N
Sbjct: 295 IEPRILNSWKSLTSITLAGN 314
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 65/237 (27%), Positives = 113/237 (47%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N L + + F L +L + L +N + S++ +F+ L + + LS NQI +
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELA 129
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAP 438
F +PNL +DL NKL+ ++F + T M N ++++ +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS--- 186
Query: 439 IYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+K LD+ N+++ + N F F L +L+L+ N++ ++ F L L L L
Sbjct: 187 --LKFLDIGYNQLKSLARNSFAGLF--KLTELHLEHNDLIKVNFAHFPRLISLNSLCLRR 242
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PR 553
N +A+VV + + NL+ +DLS NEI + F L+ L + NRL + PR
Sbjct: 243 NKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTYIEPR 298
Score = 186 (70.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 63/248 (25%), Positives = 122/248 (49%)
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
+NL+ L ++L YN +S++ F +L + L +N++ ++ D F L+ + +T
Sbjct: 62 HNLSGLLGLSLRYNSLSELRAG--QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELT 119
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N + + T+F+ + N+ ++ LS+N+++ + P+ F L L L ++ N ++ +
Sbjct: 120 LSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVR 179
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFAD 464
+F + S + L++ N + +L N A ++ + L L +N + + VNF F
Sbjct: 180 IFQDCRSLKF---LDIGYNQLKSLARNSF--AGLFKLTELHLEHNDL--IKVNFAH-FPR 231
Query: 465 --SLRKLYLDFNEIKHLDATAFGNLDV---LELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
SL L L N++ A +LD LE + L N I + F +P LQ + L
Sbjct: 232 LISLNSLCLRRNKV----AIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQSLQL 287
Query: 520 SFNEISML 527
N ++ +
Sbjct: 288 DSNRLTYI 295
Score = 175 (66.7 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 68/268 (25%), Positives = 124/268 (46%)
Query: 210 HLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEW 269
+L L LSL +N L EL + F +L L + + S + + + L ++
Sbjct: 63 NLSGLLGLSLRYNSLS--ELRAGQFTGLMQLTWLYLDHNHICSVQGDAF---QKLRRVKE 117
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + +N I + N + + +L ++L YNK+ + +LFH + K L + + N ++
Sbjct: 118 LTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFH-GLRK-LTTLHMRANAIQF 175
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F + + L + + YN LKS+ SF L + + L N + I N F + P L
Sbjct: 176 VPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL--IKVN-FAHFPRL 232
Query: 390 VKLD---LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL 446
+ L+ L+ NK+ V S++ ++LS N I + + + P Y++SL L
Sbjct: 233 ISLNSLCLRRNKVAI----VVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVP-YLQSLQL 287
Query: 447 SNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+NR+ + L ++ SL + L N
Sbjct: 288 DSNRLTYIEPRILNSWK-SLTSITLAGN 314
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/211 (27%), Positives = 107/211 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT+L FR + NL+ + LS+NKLQ L ++F KL L + N+ +F
Sbjct: 123 NQITELANTTFRPMPNLRSVDLSYNKLQA--LAPDLFHGLRKLTTLHMRA---NAIQFVP 177
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ ++ +L++L + N +K++ S L L ++LE+N + K+ N HF L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKV--NFAHFPRLISL 235
Query: 318 KEIRLSNNYLELIES--DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ L N + ++ S D +NL++++ LS N ++ ++ F+ + + ++ L N++
Sbjct: 236 NSLCLRRNKVAIVVSSLDWVWNLEKMD---LSGNEIEYMEPHVFETVPYLQSLQLDSNRL 292
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
YI P + +L + L N L D NV
Sbjct: 293 TYIEPRILNSWKSLTSITLAGN-LWDCGRNV 322
Score = 157 (60.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + E+ T L LYLD N I + AF L ++ L+L N I +
Sbjct: 70 LSLRYNSLSELRAGQF-TGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITEL 128
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIE 562
TF MPNL+ +DLS+N++ L + F+ KL L++ N ++ +P +F + ++
Sbjct: 129 ANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLK 188
Query: 563 KLDISYNQDK 572
LDI YNQ K
Sbjct: 189 FLDIGYNQLK 198
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 47/164 (28%), Positives = 78/164 (47%)
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
NL L+ L L+ N L + F+ + L L +N+I ++ + D Q +K L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTW---LYLDHNHICSV-QGDAFQKLRRVKEL 118
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
LS+N+I E+ + + LR + L +N+++ L F L L L + N I V
Sbjct: 119 TLSSNQITELANTTFRPMPN-LRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVP 177
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
R F +L+ +D+ +N++ L F FKL L++ HN L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 217 (81.4 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 73/246 (29%), Positives = 117/246 (47%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYN 337
KN+R T+ +NL N+I I N F H L+ ++LS N++ IE F
Sbjct: 65 KNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRH--LEILQLSRNHIRTIEIGAFNG 122
Query: 338 LKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDN 397
L LNT+ L N L +I +F L+ + + L N I+ I AF +P+L +LDL +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 398 K-LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
K L + F ++ NL N + NL E + + LDLS N + +
Sbjct: 183 KRLSYISEGAFEGLS------NLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLSAIRP 236
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
Q L+KL++ ++I+ ++ AF NL L ++L HNN+ ++ F + +L+
Sbjct: 237 GSFQGLMH-LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 295
Query: 517 IDLSFN 522
I L N
Sbjct: 296 IHLHHN 301
Score = 180 (68.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 63/204 (30%), Positives = 105/204 (51%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N+I + N F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 86 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 145
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I +Y+ + SL ++L E ++S I F +
Sbjct: 146 Y--LSK-LKEL-WLR--NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL 199
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L E L +L+ + LS N L +I+ SF+ L ++ + + +QI
Sbjct: 200 RYLNLAMCN----LREIPNLTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 255
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKL 399
+ I NAF NL +LV+++L N L
Sbjct: 256 QVIERNAFDNLQSLVEINLAHNNL 279
Score = 166 (63.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 59/252 (23%), Positives = 121/252 (48%)
Query: 297 EYNKISKIHNNLFHF--NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+++K+ + NL I + + L N +++I+ ++F +L+ L + LS N +++I
Sbjct: 56 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTI 115
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
+ +F L N+ + L N++ I AFV L L +L L++N ++ F+ I S +
Sbjct: 116 EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 175
Query: 415 TPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
L+L + + ++ L+L+ ++E+P N T L +L L N
Sbjct: 176 ---RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP-NL--TPLVKLDELDLSGN 229
Query: 475 EIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYF 534
+ + +F L L+ L + + I V+ + F + +L I+L+ N +++L + F
Sbjct: 230 HLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 289
Query: 535 SFKLRILNISHN 546
L +++ HN
Sbjct: 290 LHHLERIHLHHN 301
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 61/229 (26%), Positives = 112/229 (48%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N ++ IK SFK+L ++ + LS N I+ I AF L NL L+L DN+L
Sbjct: 81 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIP 140
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNFLQTF 462
F ++ + L L NN I ++ + P ++ LDL R+ + +
Sbjct: 141 NGAFVYLSKLK---ELWLRNNPIESIPSYAFNRIPS-LRRLDLGELKRLSYISEGAFEGL 196
Query: 463 ADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
++ LR L L ++ + + T LD L+L N+++ + +F G+ +LQ + +
Sbjct: 197 SN-LRYLNLAMCNLREIPNLTPLVKLDELDLSG---NHLSAIRPGSFQGLMHLQKLWMIQ 252
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
++I ++ F L +N++HN L LP D+F+ +E++ + +N
Sbjct: 253 SQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 64/238 (26%), Positives = 114/238 (47%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N + L+L N++QII++NS F L++L++S + + E + NLNTLE +
Sbjct: 77 NTRLLNLHENQIQIIKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE---L 131
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN-NYLELIE 331
+N + I N + L+ L + L N I I + + FN L+ + L L I
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDLGELKRLSYIS 189
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
F L L + L+ L+ I + L + + LS N + I P +F L +L K
Sbjct: 190 EGAFEGLSNLRYLNLAMCNLREIPNLT--PLVKLDELDLSGNHLSAIRPGSFQGLMHLQK 247
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L + ++++ N F N+ Q+ + +NL++N +T L +D +++ + L +N
Sbjct: 248 LWMIQSQIQVIERNAFDNL---QSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 301
Score = 142 (55.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 57/215 (26%), Positives = 98/215 (45%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N+I+ I + L +LN + L N+++ I N F + +LKE+
Sbjct: 97 KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL--SKLKELW 154
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I S F + L + L L I +F+ L+N+ + L+ ++ I P
Sbjct: 155 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P 213
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYIT-NLYENDKKQAPI 439
N L L +LDL N L F + Q + I N ++N +
Sbjct: 214 N-LTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS---- 268
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
+ ++L++N + +P + L T L +++L N
Sbjct: 269 -LVEINLAHNNLTLLPHD-LFTPLHHLERIHLHHN 301
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 216 (81.1 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 71/263 (26%), Positives = 136/263 (51%)
Query: 262 KNLN-TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEI 320
+N++ + + L++ N++ + Y +L L ++ L++N+I + + F + +RLKE+
Sbjct: 54 ENISVSCQGLSLRYNDLHTMLPYQFAHLNQLLWLYLDHNQIMFVDSRAFQ-GV-RRLKEL 111
Query: 321 RLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
LS+N + + + TF+ + L ++ LSYN L+ ++ F L + N+ L N + I
Sbjct: 112 ILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPV 171
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL-YENDKKQAPI 439
AF+ +L LDL N+L+ F ++ M L+L +N + + + + A +
Sbjct: 172 RAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRL---MELHLEHNQFSRINFFLFPRLANL 228
Query: 440 YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
++L L NRI+ V ++ +L++L + NEI+ LD F L L++L+LE N
Sbjct: 229 --RALYLQWNRIRAVNQGLPWSWY-TLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNK 285
Query: 500 IAVVVKRTFIGMPNLQIIDLSFN 522
+A V + +L I L+ N
Sbjct: 286 LANVSQEVVAAWISLTTISLAGN 308
Score = 202 (76.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 70/267 (26%), Positives = 127/267 (47%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
NI + + L N L + F +L +L + L +N + + + +F+ + + ++LS
Sbjct: 55 NISVSCQGLSLRYNDLHTMLPYQFAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILS 114
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I ++ F +PNL LDL NKL++ F + Q NL+L +N +T +
Sbjct: 115 SNRISQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQ---NLHLRSNGLTAIPV 171
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
+ ++ LDL NR++ + FL L +L+L+ N+ ++ F L L
Sbjct: 172 RAFLECRS-LEFLDLGYNRLRVLTRTAFLGL--SRLMELHLEHNQFSRINFFLFPRLANL 228
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
L L+ N I V + LQ +D+S NEI +L F L++LN+ N+L +
Sbjct: 229 RALYLQWNRIRAVNQGLPWSWYTLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNKLAN 288
Query: 551 LPRDVFSNTI-IEKLDISYNQDKIRPG 576
+ ++V + I + + ++ N PG
Sbjct: 289 VSQEVVAAWISLTTISLAGNMWDCGPG 315
Score = 169 (64.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 46/149 (30%), Positives = 80/149 (53%)
Query: 427 TNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFG 485
++ +++ + + + L L N + + P F + L LYLD N+I +D+ AF
Sbjct: 46 SSAFQDVPENISVSCQGLSLRYNDLHTMLPYQFAHL--NQLLWLYLDHNQIMFVDSRAFQ 103
Query: 486 NLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
+ L+ L L N I+ + TF G+PNL+ +DLS+N++ L QFY KL+ L++
Sbjct: 104 GVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRS 163
Query: 546 NRLRSLPRDVFSNT-IIEKLDISYNQDKI 573
N L ++P F +E LD+ YN+ ++
Sbjct: 164 NGLTAIPVRAFLECRSLEFLDLGYNRLRV 192
Score = 160 (61.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 58/228 (25%), Positives = 110/228 (48%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS-LFNSNEFP 256
N+I ++ F+ + L+EL LS N++ +L++ F L+ L++S++ L
Sbjct: 92 NQIMFVDSRAFQGVRRLKELILSSNRIS--QLHNVTFHGVPNLRSLDLSYNKLQELQPGQ 149
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+Y L K L+ L + +N + I + SL +++L YN++ + F + R
Sbjct: 150 FYGLRK----LQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAF-LGL-SR 203
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L E+ L +N I F L L + L +N ++++ + + + +S N+I+
Sbjct: 204 LMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIRAVNQGLPWSWYTLQRLDISGNEIQ 263
Query: 377 YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+ P F LPNL L+L+ NKL + + V + S T ++L+ N
Sbjct: 264 VLDPVVFQCLPNLQVLNLESNKLANVSQEVVAAWISLTT---ISLAGN 308
Score = 138 (53.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 65/268 (24%), Positives = 118/268 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I+ L+ F + NL+ L LS+NKLQ EL F KLQ L + + +
Sbjct: 116 NRISQLHNVTFHGVPNLRSLDLSYNKLQ--ELQPGQFYGLRKLQNLHLRSNGLTAIPVRA 173
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++ +LE+L + N ++ + + L+ L ++LE+N+ S+I N F F L
Sbjct: 174 FL---ECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRI--NFFLFPRLANL 228
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + L N + + ++ L + +S N ++ + F+ L N+ + L N++
Sbjct: 229 RALYLQWNRIRAVNQGLPWSWYTLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNKLAN 288
Query: 378 IYPNAFVNLPNLVKLDLQDNK-------------LKDFNLNVFSNITSKQTPMNLN---- 420
+ +L + L N LK+F +NI +P +L
Sbjct: 289 VSQEVVAAWISLTTISLAGNMWDCGPGICPLVVWLKNFRGTKDTNIICS-SPKHLQGEKV 347
Query: 421 --LSNNYIT-NLYENDKKQAPIYIKSLD 445
S NYI + YE Q+P+Y+++ D
Sbjct: 348 IEASKNYIDCDDYEITA-QSPLYLQTFD 374
>UNIPROTKB|F1NY48 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
GO:GO:0016021 GO:GO:0030154 GO:GO:0004930 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007188
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 OMA:YTLTTRP
GeneTree:ENSGT00650000093266 EMBL:AADN02016502 IPI:IPI00603372
ProteinModelPortal:F1NY48 Ensembl:ENSGALT00000015353 Uniprot:F1NY48
Length = 755
Score = 218 (81.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 62/245 (25%), Positives = 119/245 (48%)
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
+ + + L N L + +D F ++L + L N ++++ +FK L N+ + LS
Sbjct: 121 VPSNITTMSLQKNLLRKLYADVFRKYQDLKNLYLQDNKIRAVSKHAFKGLYNLTKLYLSN 180
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N+I + P F +L L L +++N++ + + F + S + L++ NN + +L +
Sbjct: 181 NKITNLKPRVFEDLHKLEWLIIENNRINRISPSTFYGLKSL---ILLDMMNNSLAHLPDK 237
Query: 433 DKKQAPIYIKSLDLSNNRIQEVP-VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
Q + LDL N I + V F+ +L L + N+I L+ +F +L +L+
Sbjct: 238 PLCQYMPRLNWLDLEGNHIHHLRNVTFIS--CSTLTVLVMRQNKISSLNENSFSSLQMLD 295
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N I + F + L ++LS+N I + +QF F KL+ L++ + ++
Sbjct: 296 ELDLASNEIESLPAYVFKDLKELSQLNLSYNPIKKIQIDQFDFLTKLKSLSLEGIEIANI 355
Query: 552 PRDVF 556
R +F
Sbjct: 356 QRRMF 360
Score = 207 (77.9 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 57/193 (29%), Positives = 106/193 (54%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI-SFSLFNSNEFP 256
NKIT+L +F L+ L+ L + N++ ++ + F + L LL++ + SL + + P
Sbjct: 181 NKITNLKPRVFEDLHKLEWLIIENNRIN--RISPSTFYGLKSLILLDMMNNSLAHLPDKP 238
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L + + L WL ++ N+I ++RN + + ++L + + NKIS ++ N F+ +
Sbjct: 239 ---LCQYMPRLNWLDLEGNHIHHLRNVTFISCSTLTVLVMRQNKISSLNEN--SFSSLQM 293
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L E+ L++N +E + + F +LKEL+ + LSYN +K I+ F L + ++ L +I
Sbjct: 294 LDELDLASNEIESLPAYVFKDLKELSQLNLSYNPIKKIQIDQFDFLTKLKSLSLEGIEIA 353
Query: 377 YIYPNAFVNLPNL 389
I F+ L NL
Sbjct: 354 NIQRRMFIPLRNL 366
Score = 192 (72.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 81/320 (25%), Positives = 145/320 (45%)
Query: 202 DLNG-NL-FRHLYNLQEL-SLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYY 258
D NG +L F Y L ++ SL + + E + V K Q LE+ + P
Sbjct: 62 DNNGWSLQFDKHYTLDKMKSLYAFQTKTPECLAGAVPVECKCQGLEVFCDAAKLRDVP-- 119
Query: 259 ILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLK 318
++ N+ T+ ++ N ++ + L + L+ NKI + + F ++ L
Sbjct: 120 LVPSNITTM---SLQKNLLRKLYADVFRKYQDLKNLYLQDNKIRAVSKHAFK-GLYN-LT 174
Query: 319 EIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
++ LSNN + ++ F +L +L + + N + I ++F L +++ + + N + ++
Sbjct: 175 KLYLSNNKITNLKPRVFEDLHKLEWLIIENNRINRISPSTFYGLKSLILLDMMNNSLAHL 234
Query: 379 YPNAFVN-LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
+P L LDL+ N + NV S T L + N I++L EN
Sbjct: 235 PDKPLCQYMPRLNWLDLEGNHIHHLR-NV--TFISCSTLTVLVMRQNKISSLNENSFSSL 291
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+ + LDL++N I+ +P + + L +L L +N IK + F L L+ LSLE
Sbjct: 292 QM-LDELDLASNEIESLPAYVFKDLKE-LSQLNLSYNPIKKIQIDQFDFLTKLKSLSLEG 349
Query: 498 NNIAVVVKRTFIGMPNLQII 517
IA + +R FI + NL I
Sbjct: 350 IEIANIQRRMFIPLRNLSHI 369
Score = 181 (68.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 61/212 (28%), Positives = 107/212 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNS-NEFP 256
NKI ++ + F+ LYNL +L LS NK I L VF+ KL+ L I + N +
Sbjct: 157 NKIRAVSKHAFKGLYNLTKLYLSNNK--ITNLKPRVFEDLHKLEWLIIENNRINRISPST 214
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYN-LTSLNYINLEYNKISKIHNNLFHFNIHK 315
+Y L +L L M NN++ ++ + L + LN+++LE N I + N F +
Sbjct: 215 FY----GLKSLILLDMMNNSLAHLPDKPLCQYMPRLNWLDLEGNHIHHLRNVTF-ISC-S 268
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L + + N + + ++F +L+ L+ + L+ N ++S+ FK+L + + LS+N I
Sbjct: 269 TLTVLVMRQNKISSLNENSFSSLQMLDELDLASNEIESLPAYVFKDLKELSQLNLSYNPI 328
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
K I + F L L L L+ ++ + +F
Sbjct: 329 KKIQIDQFDFLTKLKSLSLEGIEIANIQRRMF 360
Score = 181 (68.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 57/232 (24%), Positives = 111/232 (47%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + L ++FR +L+ L L NK++ + + + F L L +S + +N P
Sbjct: 133 NLLRKLYADVFRKYQDLKNLYLQDNKIRAV--SKHAFKGLYNLTKLYLSNNKI-TNLKPR 189
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++L+ LEWL ++NN I I + Y L SL +++ N ++ + + RL
Sbjct: 190 VF--EDLHKLEWLIIENNRINRISPSTFYGLKSLILLDMMNNSLAHLPDKPL-CQYMPRL 246
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L N++ + + TF + L + + N + S+ SF +L + + L+ N+I+
Sbjct: 247 NWLDLEGNHIHHLRNVTFISCSTLTVLVMRQNKISSLNENSFSSLQMLDELDLASNEIES 306
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
+ F +L L +L+L N +K ++ F +T ++ L+L I N+
Sbjct: 307 LPAYVFKDLKELSQLNLSYNPIKKIQIDQFDFLTKLKS---LSLEGIEIANI 355
Score = 176 (67.0 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 65/258 (25%), Positives = 122/258 (47%)
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
+++ ++L+ N + K++ ++F ++ LK + L +N + + F L L + LS
Sbjct: 123 SNITTMSLQKNLLRKLYADVFRK--YQDLKNLYLQDNKIRAVSKHAFKGLYNLTKLYLSN 180
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFS 408
N + ++K F++L+ + +++ N+I I P+ F L +L+ LD+ +N L
Sbjct: 181 NKITNLKPRVFEDLHKLEWLIIENNRINRISPSTFYGLKSLILLDMMNNSLAHLPDKPLC 240
Query: 409 NITSKQTPMN-LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
+ +N L+L N+I +L N + + L + N+I + N + L
Sbjct: 241 QYMPR---LNWLDLEGNHIHHL-RNVTFISCSTLTVLVMRQNKISSLNENSFSSL-QMLD 295
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISML 527
+L L NEI+ L A F +L L L+L +N I + F + L+ + L EI+ +
Sbjct: 296 ELDLASNEIESLPAYVFKDLKELSQLNLSYNPIKKIQIDQFDFLTKLKSLSLEGIEIANI 355
Query: 528 TGEQFYFSFKLRILNISH 545
F LR N+SH
Sbjct: 356 QRRMF---IPLR--NLSH 368
Score = 173 (66.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/214 (29%), Positives = 101/214 (47%)
Query: 363 NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+N+ + L N ++ +Y + F +L L LQDNK++ + + F + + L LS
Sbjct: 123 SNITTMSLQKNLLRKLYADVFRKYQDLKNLYLQDNKIRAVSKHAFKGLYNLT---KLYLS 179
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--NEIKHL- 479
NN ITNL + ++ L + NNRI + + TF + LD N + HL
Sbjct: 180 NNKITNLKPRVFEDLH-KLEWLIIENNRINRISPS---TFYGLKSLILLDMMNNSLAHLP 235
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
D + L L LE N+I + TFI L ++ + N+IS L F L
Sbjct: 236 DKPLCQYMPRLNWLDLEGNHIHHLRNVTFISCSTLTVLVMRQNKISSLNENSFSSLQMLD 295
Query: 540 ILNISHNRLRSLPRDVFSNTI-IEKLDISYNQDK 572
L+++ N + SLP VF + + +L++SYN K
Sbjct: 296 ELDLASNEIESLPAYVFKDLKELSQLNLSYNPIK 329
>ZFIN|ZDB-GENE-090630-1 [details] [associations]
symbol:lrrc32 "leucine rich repeat containing 32"
species:7955 "Danio rerio" [GO:0030168 "platelet activation"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-090630-1 GO:GO:0030168 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104185 EMBL:CU469093 IPI:IPI00627758
RefSeq:XP_001920576.2 Ensembl:ENSDART00000059478 GeneID:100148867
KEGG:dre:100148867 NextBio:20792493 Uniprot:E7FFN8
Length = 659
Score = 217 (81.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 93/355 (26%), Positives = 165/355 (46%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+I L LFR L +L++L LS N L + L+ L++S + ++ Y
Sbjct: 84 NQIQFLQPGLFRDLLHLEDLDLSGNALDLYAALHTPLGPLPALRRLDLSGNGLFTDMSDY 143
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++ + L L++D N+I I + +L I+L N I +I F F L
Sbjct: 144 FL--SDAPALTNLSLDGNSITKISRTTFNGSQALQNIDLHNNVIIEIEEGAFEFLTE--L 199
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
E+ LS N + I T +NL +L T+ LS N L + ++ ++ + ++ L N++ Y
Sbjct: 200 SELDLSVNSISCI---TDFNLVQLRTLNLSRNSLTNFQSLDMEDEFQLQHLDLRENKLLY 256
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLN-VFSNITSKQTPMNLNLSNNYITNLYENDKKQ 436
+P L+ LDL N L+ N + + S + L +++ L N+++Q
Sbjct: 257 -FP-VLPQRNRLMYLDLSRNLLRSVNCSGPLEELESLRESGYLLTAHDKPLTLCANERQQ 314
Query: 437 APIYIKSLDLSNNRIQEVPVNF----------------LQTFA-DSLRKLY---LDFNEI 476
+ LDLS N+++ + +F LQ+F+ DSLR L L FN +
Sbjct: 315 ELGRLLYLDLSFNQLKTLSSSFFSSMAALESLNISNNCLQSFSVDSLRSLKTLDLSFNNL 374
Query: 477 KHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
++L + G L LE+L L+ N + ++ F +P+++ + L N +S+ Q
Sbjct: 375 QNLSFSG-GALPALEVLLLQGNALHLLDAHIFSSLPSIRSLHLQQNLLSICADPQ 428
Score = 184 (69.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 97/402 (24%), Positives = 179/402 (44%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N IT ++ F LQ + L N IIE+ F+ +L L++S + +
Sbjct: 159 NSITKISRTTFNGSQALQNIDLHNNV--IIEIEEGAFEFLTELSELDLSVNSISC----- 211
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI-----HNNLFHFN 312
I + NL L L + N++ N ++ + + L +++L NK+ N L + +
Sbjct: 212 -ITDFNLVQLRTLNLSRNSLTNFQSLDMEDEFQLQHLDLRENKLLYFPVLPQRNRLMYLD 270
Query: 313 IHKRL-KEIRLSNNYLELIESDTFYNLKELNTITLSYNL-LKSIKTTSFKNLNNMLNIVL 370
+ + L + + S LE +ES L+E + +++ L + L +L + L
Sbjct: 271 LSRNLLRSVNCSGP-LEELES-----LRESGYLLTAHDKPLTLCANERQQELGRLLYLDL 324
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL- 429
SFNQ+K + + F ++ L L++ +N L+ F+++ ++ S +T L+LS N + NL
Sbjct: 325 SFNQLKTLSSSFFSSMAALESLNISNNCLQSFSVD---SLRSLKT---LDLSFNNLQNLS 378
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK-----HLDATAF 484
+ A ++ L L N + + + + S+R L+L N + + +
Sbjct: 379 FSGGALPA---LEVLLLQGNALHLLDAHIFSSLP-SIRSLHLQQNLLSICADPQISSGCV 434
Query: 485 GNLDV--LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNE-ISMLTGEQFYFSFKLRIL 541
D+ L L L N+++ + F G P L I+DLS N + + L L
Sbjct: 435 HLSDIPSLTYLYLSENSLSSIPDGAFKGSP-LLILDLSLNPGVDITAASLSGVETSLTHL 493
Query: 542 NISHNRLRSLPRD--VFSNTIIEKLDISYNQ-DKIRPGRESN 580
++ N+L SL D VF + LD+S N+ + P E +
Sbjct: 494 SLRGNQLHSLSIDFRVFQK--LRSLDVSVNRLSGVSPWSEDS 533
Score = 166 (63.5 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 91/380 (23%), Positives = 166/380 (43%)
Query: 198 NKITDLNGNLFRHLYNLQELSLS---------FNKLQI--IELNSNVFDVFEKLQLLEIS 246
N I ++ F L L EL LS FN +Q+ + L+ N F+ L + E
Sbjct: 183 NVIIEIEEGAFEFLTELSELDLSVNSISCITDFNLVQLRTLNLSRNSLTNFQSLDM-EDE 241
Query: 247 FSL----FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIR-NYSLYNLTSLN---YINLEY 298
F L N+ Y+ + N L +L + N ++++ + L L SL Y+ +
Sbjct: 242 FQLQHLDLRENKLLYFPVLPQRNRLMYLDLSRNLLRSVNCSGPLEELESLRESGYLLTAH 301
Query: 299 NKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTS 358
+K + N + RL + LS N L+ + S F ++ L ++ +S N L+S S
Sbjct: 302 DKPLTLCANERQQELG-RLLYLDLSFNQLKTLSSSFFSSMAALESLNISNNCLQSFSVDS 360
Query: 359 FKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
++L + LSFN ++ + + LP L L LQ N L + ++FS++ S ++
Sbjct: 361 LRSLKTL---DLSFNNLQNLSFSGGA-LPALEVLLLQGNALHLLDAHIFSSLPSIRS--- 413
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLD------LSNNRIQEVPVNFLQTFADSLRKLYLD 472
L+L N ++ + +++ + LS N + +P + L L L
Sbjct: 414 LHLQQNLLSICADPQISSGCVHLSDIPSLTYLYLSENSLSSIPDGAFK--GSPLLILDLS 471
Query: 473 FNEIKHLDATAFGNLDV-LELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQ 531
N + A + ++ L LSL N + + F L+ +D+S N +S ++
Sbjct: 472 LNPGVDITAASLSGVETSLTHLSLRGNQLHSL-SIDFRVFQKLRSLDVSVNRLSGVS--P 528
Query: 532 FYFSFKLRILNISHNRLRSL 551
+ + ILN+ +NR+ +L
Sbjct: 529 WSEDSSVEILNLQNNRVEAL 548
Score = 159 (61.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 126/523 (24%), Positives = 221/523 (42%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFNSK---LRELEITGKD 55
LDLS N L + A L++ + L L L G+ L F S L L + G
Sbjct: 103 LDLSGNALDLY--AALHTPLGPLPALRRLDLSGNGLFTDMSDYFLSDAPALTNLSLDGNS 160
Query: 56 LKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMAT 115
+ I + F+ A ++ L N I E+ G F+ + + + LDLS N +S +
Sbjct: 161 ITKISRTTFNGSQALQNIDLH--NNVIIEIEEGAFEFLTELSE--LDLSVNSISCITDFN 216
Query: 116 LYSNVT-KLQHLGTTILKDRE-KXXXXXXXXXXRCNKIT------DLNGNLFRHLQKSIV 167
L T L T + + + R NK+ N ++ L ++++
Sbjct: 217 LVQLRTLNLSRNSLTNFQSLDMEDEFQLQHLDLRENKLLYFPVLPQRNRLMYLDLSRNLL 276
Query: 168 KAKKNNNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQII 227
++ + E+ S RE + L R LY L LSFN+L+
Sbjct: 277 RSVNCSGPLEELESLRESGYLLTAHDKPLTLCANERQQELGRLLY----LDLSFNQLKT- 331
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN 287
L+S+ F L+ L IS + S F L ++L TL+ + NN++N+ ++S
Sbjct: 332 -LSSSFFSSMAALESLNISNNCLQS--FSVDSL-RSLKTLD---LSFNNLQNL-SFSGGA 383
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE----SDTFYNLKELNT 343
L +L + L+ N + + ++F + ++ + L N L + S +L ++ +
Sbjct: 384 LPALEVLLLQGNALHLLDAHIF--SSLPSIRSLHLQQNLLSICADPQISSGCVHLSDIPS 441
Query: 344 IT---LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLP-NLVKLDLQDNKL 399
+T LS N L SI +FK + +L + LS N I + + +L L L+ N+L
Sbjct: 442 LTYLYLSENSLSSIPDGAFKG-SPLLILDLSLNPGVDITAASLSGVETSLTHLSLRGNQL 500
Query: 400 KDFNLN--VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVN 457
+++ VF + S +N LS + + D ++ L+L NNR++ +
Sbjct: 501 HSLSIDFRVFQKLRSLDVSVN-RLSG---VSPWSEDSS-----VEILNLQNNRVEALGSA 551
Query: 458 FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
LQ LR LY+ +N + + N +L+LL E ++
Sbjct: 552 LLQ---GRLRTLYVGWNPL-----SCCRNPQLLDLLQQERLHV 586
Score = 150 (57.9 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 58/230 (25%), Positives = 108/230 (46%)
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
+ + LS NLL+++ + +++ + L NQI+++ P F +L +L LDL N L
Sbjct: 52 IRLLDLSQNLLQNLTLQDLPSRSSLRRLDLHHNQIQFLQPGLFRDLLHLEDLDLSGNAL- 110
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYI-TNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFL 459
D + + + L+LS N + T++ + AP + +L L N I ++
Sbjct: 111 DLYAALHTPLGPLPALRRLDLSGNGLFTDMSDYFLSDAPA-LTNLSLDGNSITKISRTTF 169
Query: 460 QTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
+ +L+ + L N I ++ AF L L L L N+I+ + T + L+ ++L
Sbjct: 170 NG-SQALQNIDLHNNVIIEIEEGAFEFLTELSELDLSVNSISCI---TDFNLVQLRTLNL 225
Query: 520 SFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
S N ++ F+L+ L++ N+L P N ++ LD+S N
Sbjct: 226 SRNSLTNFQSLDMEDEFQLQHLDLRENKLLYFPVLPQRNRLMY-LDLSRN 274
Score = 149 (57.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
LS N ++ + + +L +LDL N+++ +F ++ + +L+LS N + +L
Sbjct: 57 LSQNLLQNLTLQDLPSRSSLRRLDLHHNQIQFLQPGLFRDLLHLE---DLDLSGNAL-DL 112
Query: 430 YEN-DKKQAPI-YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNL 487
Y P+ ++ LDLS N + ++ + A +L L LD N I + T F
Sbjct: 113 YAALHTPLGPLPALRRLDLSGNGLFTDMSDYFLSDAPALTNLSLDGNSITKISRTTFNGS 172
Query: 488 DVLELLSLEHNNIAVVVKR-TFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
L+ + L HNN+ + ++ F + L +DLS N IS +T + +LR LN+S N
Sbjct: 173 QALQNIDL-HNNVIIEIEEGAFEFLTELSELDLSVNSISCITD---FNLVQLRTLNLSRN 228
Query: 547 RLRSLPR-DVFSNTIIEKLDISYNQ 570
L + D+ ++ LD+ N+
Sbjct: 229 SLTNFQSLDMEDEFQLQHLDLRENK 253
>TAIR|locus:2046357 [details] [associations]
symbol:RLP23 "receptor like protein 23" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006952 "defense response" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=IC] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009627 "systemic acquired resistance" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010310 "regulation
of hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG4886
EMBL:AC003974 HOGENOM:HOG000116562 UniGene:At.66389 IPI:IPI00539943
PIR:T00800 RefSeq:NP_180827.1 ProteinModelPortal:O48849 SMR:O48849
STRING:O48849 PRIDE:O48849 EnsemblPlants:AT2G32680.1 GeneID:817828
KEGG:ath:AT2G32680 TAIR:At2g32680 InParanoid:O48849
PhylomeDB:O48849 ProtClustDB:CLSN2683406 ArrayExpress:O48849
Genevestigator:O48849 Uniprot:O48849
Length = 890
Score = 218 (81.8 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 90/351 (25%), Positives = 155/351 (44%)
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
++ NS++F F +L+ +++ + S+ P NL LE L + +N S
Sbjct: 88 LKSNSSLFG-FHQLRYVDLQNNNLTSSSLPSGF--GNLKRLEGLFLSSNGFLGQVPSSFS 144
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE--LIESDTFYNLKELNTI 344
NLT L ++L YNK++ + ++L + LS N+ L + + + L +L +
Sbjct: 145 NLTMLAQLDLSYNKLTGSFPLVRGL---RKLIVLDLSYNHFSGTLNPNSSLFELHQLRYL 201
Query: 345 TLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNL 404
L++N S + F NL+ + N++LS N P+ NL L KL L NKL +
Sbjct: 202 NLAFNNFSSSLPSKFGNLHRLENLILSSNGFSGQVPSTISNLTRLTKLYLDQNKLTS-SF 260
Query: 405 NVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDL-SNNRIQEVPVNFLQTFA 463
+ N+T+ L+LS N + + P ++ L L NN V V+ T +
Sbjct: 261 PLVQNLTNLY---ELDLSYNKFFGVIPSSLLTLP-FLAHLALRENNLAGSVEVSNSST-S 315
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVK-RTFIGMPNLQIIDLSFN 522
L +YL N + L L+ L L N + + + F + +L+ +DLS N
Sbjct: 316 SRLEIMYLGSNHFEGQILEPISKLINLKHLDLSFLNTSYPIDLKLFSSLKSLRSLDLSGN 375
Query: 523 EISMLT-GEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDK 572
IS + Y L +L + H + P + + + +DIS N+ K
Sbjct: 376 SISSASLSSDSYIPLTLEMLTLRHCDINEFPNILKTLKELVYIDISNNRMK 426
Score = 186 (70.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 126/537 (23%), Positives = 223/537 (41%)
Query: 28 LGTTILKGDQLQGIFNSKLRELEITGKDLKFID-PSAFDNIDACYDLTLKITNTQIEELP 86
L T+ L G F+ +LR +++ +L PS F N+ L L +N + ++P
Sbjct: 84 LSGTLKSNSSLFG-FH-QLRYVDLQNNNLTSSSLPSGFGNLKRLEGLFLS-SNGFLGQVP 140
Query: 87 SGLFDKIENIEQMTLDLSHNKLS-----VLNMATLYSNVTKLQHLGTTI-----LKDREK 136
S F + + Q LDLS+NKL+ V + L H T+ L + +
Sbjct: 141 SS-FSNLTMLAQ--LDLSYNKLTGSFPLVRGLRKLIVLDLSYNHFSGTLNPNSSLFELHQ 197
Query: 137 XXXXXXXXXXRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKXXXXXXXXXXR 196
+ + GNL R L+ I+ ++N QV
Sbjct: 198 LRYLNLAFNNFSSSLPSKFGNLHR-LENLIL----SSNGFSGQVPSTISNLTRLTKLYLD 252
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKL-QIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
NK+T + L ++L NL EL LS+NK +I + L L E + L S E
Sbjct: 253 QNKLTS-SFPLVQNLTNLYELDLSYNKFFGVIPSSLLTLPFLAHLALRENN--LAGSVE- 308
Query: 256 PYYILNKNLNT-LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIH 314
+ N + ++ LE + + +N+ + + L +L +++L + S +L F+
Sbjct: 309 ---VSNSSTSSRLEIMYLGSNHFEGQILEPISKLINLKHLDLSFLNTS-YPIDLKLFSSL 364
Query: 315 KRLKEIRLSNNYLEL--IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSF 372
K L+ + LS N + + SD++ L L +TL + + K L ++ I +S
Sbjct: 365 KSLRSLDLSGNSISSASLSSDSYIPLT-LEMLTLRHCDINEFPNI-LKTLKELVYIDISN 422
Query: 373 NQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
N++K P +LP L + L +N F + + S + L+ SNN+ E
Sbjct: 423 NRMKGKIPEWLWSLPLLQSVTLGNNYFTGFQGSAEILVNSSVLLLYLD-SNNF-----EG 476
Query: 433 DKKQAPIYIKSLDLSNNRI-QEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
P+ IK +++N E+P++ SL + L +N NL E
Sbjct: 477 ALPDLPLSIKGFGVASNSFTSEIPLSICNR--SSLAAIDLSYNNFTGPIPPCLRNL---E 531
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
L+ L +NN+ + +L+ +D+S N ++ F L+ L++ +NR+
Sbjct: 532 LVYLRNNNLEGSIPDALCDGASLRTLDVSHNRLTGKLPRSFVNCSSLKFLSVINNRI 588
Score = 175 (66.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 94/379 (24%), Positives = 172/379 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQ-IIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
NK+T + L R L L L LS+N + NS++F++ + L+ L ++F+ F+S+ P
Sbjct: 157 NKLTG-SFPLVRGLRKLIVLDLSYNHFSGTLNPNSSLFELHQ-LRYLNLAFNNFSSS-LP 213
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
NL+ LE L + +N ++ NLT L + L+ NK++ + +
Sbjct: 214 SKF--GNLHRLENLILSSNGFSGQVPSTISNLTRLTKLYLDQNKLTSSFPLVQNLT---N 268
Query: 317 LKEIRLS-NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIV-LSFNQ 374
L E+ LS N + +I S + L L + L N L S + ++ L I+ L N
Sbjct: 269 LYELDLSYNKFFGVIPS-SLLTLPFLAHLALRENNLAGSVEVSNSSTSSRLEIMYLGSNH 327
Query: 375 IKYIYPNAFVNLPNLVKLDLQD-NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEND 433
+ L NL LDL N +L +FS++ S ++ L+LS N I++ +
Sbjct: 328 FEGQILEPISKLINLKHLDLSFLNTSYPIDLKLFSSLKSLRS---LDLSGNSISSASLSS 384
Query: 434 KKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF--NEIKHLDATAFGNLDVLE 491
P+ ++ L L + I E P N L+T + + Y+D N +K +L +L+
Sbjct: 385 DSYIPLTLEMLTLRHCDINEFP-NILKTLKELV---YIDISNNRMKGKIPEWLWSLPLLQ 440
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS- 550
++L +N I + N ++ L + + + G ++ ++ N S
Sbjct: 441 SVTLGNNYFTGFQGSAEI-LVNSSVL-LLYLDSNNFEGALPDLPLSIKGFGVASNSFTSE 498
Query: 551 LPRDVFSNTIIEKLDISYN 569
+P + + + + +D+SYN
Sbjct: 499 IPLSICNRSSLAAIDLSYN 517
Score = 169 (64.5 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 100/361 (27%), Positives = 164/361 (45%)
Query: 218 SLSFNKLQIIELNSNVFD--VFE---KL-QLLEISFSLFNSNEFPYYI-LNKNLNTLEWL 270
S + ++L+I+ L SN F+ + E KL L + S N++ +P + L +L +L L
Sbjct: 312 SSTSSRLEIMYLGSNHFEGQILEPISKLINLKHLDLSFLNTS-YPIDLKLFSSLKSLRSL 370
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF-NIHKRLKE---IRLSNNY 326
+ N+I + +L+S +YI L ++ H ++ F NI K LKE I +SNN
Sbjct: 371 DLSGNSISSA------SLSSDSYIPLTLEMLTLRHCDINEFPNILKTLKELVYIDISNNR 424
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN- 385
++ + ++L L ++TL N T F+ +L V S + Y+ N F
Sbjct: 425 MKGKIPEWLWSLPLLQSVTLGNNYF-----TGFQGSAEIL--VNSSVLLLYLDSNNFEGA 477
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNL-NLSNNYITNL-YENDKKQAPIYIKS 443
LP+L +K F V SN + + P+++ N S+ +L Y N P +++
Sbjct: 478 LPDLPL------SIKGFG--VASNSFTSEIPLSICNRSSLAAIDLSYNNFTGPIPPCLRN 529
Query: 444 LDLSNNRIQEVPVNFLQTFAD--SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
L+L R + + D SLR L + N + +F N L+ LS+ +N I
Sbjct: 530 LELVYLRNNNLEGSIPDALCDGASLRTLDVSHNRLTGKLPRSFVNCSSLKFLSVINNRIE 589
Query: 502 VVVKRTFIGMPNLQIIDLSFNEI--SMLTGEQFYFSF-KLRILNISHNRLR-SLPRDVFS 557
+PNLQ++ L N + Q F +LRI IS N+ SLP + F
Sbjct: 590 DTFPFWLKALPNLQVLTLRSNRFYGPISPPHQGPLGFPELRIFEISDNKFTGSLPPNYFV 649
Query: 558 N 558
N
Sbjct: 650 N 650
Score = 159 (61.0 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 106/394 (26%), Positives = 172/394 (43%)
Query: 204 NGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKN 263
N +LF L+ L+ L+L+FN L S F +L+ L +S + F S + P I N
Sbjct: 189 NSSLFE-LHQLRYLNLAFNNFSS-SLPSK-FGNLHRLENLILSSNGF-SGQVPSTI--SN 242
Query: 264 LNTLEWLAMDNNNIKNIRNYSLY-NLTSLNYINLEYNKI-SKIHNNLFH--FNIHKRLKE 319
L L L +D N + + ++ L NLT+L ++L YNK I ++L F H L+E
Sbjct: 243 LTRLTKLYLDQNKLTS--SFPLVQNLTNLYELDLSYNKFFGVIPSSLLTLPFLAHLALRE 300
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY-I 378
L+ + +E+ S T L + L N + L N+ ++ LSF Y I
Sbjct: 301 NNLAGS-VEVSNSSTS---SRLEIMYLGSNHFEGQILEPISKLINLKHLDLSFLNTSYPI 356
Query: 379 YPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNI--TSKQTPM---NLNLSNNYITNLYE-- 431
F +L +L LDL N + +L+ S I T + + ++N N + L E
Sbjct: 357 DLKLFSSLKSLRSLDLSGNSISSASLSSDSYIPLTLEMLTLRHCDINEFPNILKTLKELV 416
Query: 432 -----ND--KKQAPIYIKSLDLSNNRIQEVPV--NFLQTFADSLRKLYLDFNEIKHLDAT 482
N+ K + P ++ SL L +Q V + N+ F S L + +LD+
Sbjct: 417 YIDISNNRMKGKIPEWLWSLPL----LQSVTLGNNYFTGFQGSAEILVNSSVLLLYLDSN 472
Query: 483 AF-GNLDVLEL----LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
F G L L L + N+ + + +L IDLS+N TG
Sbjct: 473 NFEGALPDLPLSIKGFGVASNSFTSEIPLSICNRSSLAAIDLSYNNF---TGPIPPCLRN 529
Query: 538 LRILNISHNRLR-SLPRDVFSNTIIEKLDISYNQ 570
L ++ + +N L S+P + + LD+S+N+
Sbjct: 530 LELVYLRNNNLEGSIPDALCDGASLRTLDVSHNR 563
Score = 113 (44.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 84/340 (24%), Positives = 151/340 (44%)
Query: 211 LYNLQELSLSF-NKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY--YILNKNLNTL 267
L NL+ L LSF N I+L +F + L+ L++S + +S YI L TL
Sbjct: 339 LINLKHLDLSFLNTSYPIDLK--LFSSLKSLRSLDLSGNSISSASLSSDSYI---PL-TL 392
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKIS-KIHNNLFHFNIHKRLKEIRLSNNY 326
E L + + +I N L L L YI++ N++ KI L+ + L+ + L NNY
Sbjct: 393 EMLTLRHCDINEFPNI-LKTLKELVYIDISNNRMKGKIPEWLWSLPL---LQSVTLGNNY 448
Query: 327 LELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVN- 385
F E+ + S LL + + +F+ + ++ LS + N+F +
Sbjct: 449 FT-----GFQGSAEI--LVNSSVLLLYLDSNNFEGA--LPDLPLSIKGFG-VASNSFTSE 498
Query: 386 LPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI-TNLYENDKKQA---PIYI 441
+P + + L +L+ ++N T P NL Y+ N E A +
Sbjct: 499 IPLSI---CNRSSLAAIDLS-YNNFTGPIPPCLRNLELVYLRNNNLEGSIPDALCDGASL 554
Query: 442 KSLDLSNNRIQ-EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
++LD+S+NR+ ++P +F+ SL+ L + N I+ L L++L+L N
Sbjct: 555 RTLDVSHNRLTGKLPRSFVN--CSSLKFLSVINNRIEDTFPFWLKALPNLQVLTLRSNRF 612
Query: 501 AVVVKRTF---IGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
+ +G P L+I ++S N+ + ++ ++K
Sbjct: 613 YGPISPPHQGPLGFPELRIFEISDNKFTGSLPPNYFVNWK 652
Score = 108 (43.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 53/202 (26%), Positives = 93/202 (46%)
Query: 202 DLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFE-KLQLLEISFSLF---NSNEFPY 257
D++ N + + E S LQ + L +N F F+ ++L S L +SN F
Sbjct: 419 DISNNRMKG--KIPEWLWSLPLLQSVTLGNNYFTGFQGSAEILVNSSVLLLYLDSNNFEG 476
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKIS-KIHNNLFHFNIHKR 316
+ + L+ ++ + +N+ + S+ N +SL I+L YN + I L +
Sbjct: 477 ALPDLPLS-IKGFGVASNSFTSEIPLSICNRSSLAAIDLSYNNFTGPIPPCL------RN 529
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIK 376
L+ + L NN LE D + L T+ +S+N L SF N +++ + + N+I+
Sbjct: 530 LELVYLRNNNLEGSIPDALCDGASLRTLDVSHNRLTGKLPRSFVNCSSLKFLSVINNRIE 589
Query: 377 YIYPNAFVNLPNLVKLDLQDNK 398
+P LPNL L L+ N+
Sbjct: 590 DTFPFWLKALPNLQVLTLRSNR 611
Score = 68 (29.0 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 37/130 (28%), Positives = 56/130 (43%)
Query: 3 LDLSHNKLS-----VLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLK 57
LDLS+NKL+ V + L H T+ L + +LR L + +
Sbjct: 152 LDLSYNKLTGSFPLVRGLRKLIVLDLSYNHFSGTLNPNSSLFELH--QLRYLNLAFNNFS 209
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATL 116
PS F N+ +L L +N ++PS I N+ ++T L L NKL+ + L
Sbjct: 210 SSLPSKFGNLHRLENLILS-SNGFSGQVPS----TISNLTRLTKLYLDQNKLT--SSFPL 262
Query: 117 YSNVTKLQHL 126
N+T L L
Sbjct: 263 VQNLTNLYEL 272
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 7/26 (26%), Positives = 17/26 (65%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHL 28
+DL +N L+ ++ + + N+ +L+ L
Sbjct: 103 VDLQNNNLTSSSLPSGFGNLKRLEGL 128
>UNIPROTKB|A1A4H9 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:BC126503 IPI:IPI00706066 RefSeq:NP_001073773.1
UniGene:Bt.34711 ProteinModelPortal:A1A4H9 PRIDE:A1A4H9
GeneID:538452 KEGG:bta:538452 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 InParanoid:A1A4H9 KO:K16665 OrthoDB:EOG4FN4HG
NextBio:20877367 Uniprot:A1A4H9
Length = 521
Score = 214 (80.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 68/260 (26%), Positives = 130/260 (50%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
NL+ L L++ N++ +R L L ++ L++N I + + F + +R+KE+ L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQ-KL-RRVKELTL 120
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S+N + + + TF + L ++ LSYN L+++ F L + + + N I+++
Sbjct: 121 SSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI 180
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F + +L LD+ N+LK N F+ + K T ++L N+ + + + + I +
Sbjct: 181 FQDCRSLKFLDIGYNQLKSLARNSFAGLF-KLTELHLE-HNDLVKVNFAHFPRL--ISLH 236
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
SL L N++ V V+ L + +L K+ L NEI++++ F + L+ L L+ N +
Sbjct: 237 SLCLRRNKVAIV-VSSLD-WVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTY 294
Query: 503 VVKRTFIGMPNLQIIDLSFN 522
V R +L I L+ N
Sbjct: 295 VEPRILNSWKSLTSITLAGN 314
Score = 192 (72.6 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 65/237 (27%), Positives = 113/237 (47%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N L + + F L +L + L +N + S++ +F+ L + + LS NQI +
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLA 129
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAP 438
F +PNL +DL NKL+ ++F + T M N ++++ +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS--- 186
Query: 439 IYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+K LD+ N+++ + N F F L +L+L+ N++ ++ F L L L L
Sbjct: 187 --LKFLDIGYNQLKSLARNSFAGLF--KLTELHLEHNDLVKVNFAHFPRLISLHSLCLRR 242
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PR 553
N +A+VV + + NL+ +DLS NEI + F L+ L + NRL + PR
Sbjct: 243 NKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYVEPR 298
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 64/246 (26%), Positives = 122/246 (49%)
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
+NL+ L ++L YN +S++ F +L + L +N++ ++ D F L+ + +T
Sbjct: 62 HNLSGLLGLSLRYNSLSELRAG--QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELT 119
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N + + T+F+ + N+ ++ LS+N+++ + P+ F L L L ++ N ++ +
Sbjct: 120 LSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVR 179
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFAD 464
+F + S + L++ N + +L N A ++ + L L +N + V VNF F
Sbjct: 180 IFQDCRSLKF---LDIGYNQLKSLARNSF--AGLFKLTELHLEHNDL--VKVNFAH-FPR 231
Query: 465 --SLRKLYLDFNEIKHLDATAFGNLDV---LELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
SL L L N++ A +LD LE + L N I + F +P+LQ + L
Sbjct: 232 LISLHSLCLRRNKV----AIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQL 287
Query: 520 SFNEIS 525
N ++
Sbjct: 288 DSNRLT 293
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 57/211 (27%), Positives = 107/211 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT L FR + NL+ + LS+NKLQ L ++F KL L + N+ +F
Sbjct: 123 NQITQLANTTFRPMPNLRSVDLSYNKLQA--LAPDLFHGLRKLTTLHMRA---NAIQFVP 177
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ ++ +L++L + N +K++ S L L ++LE+N + K+ N HF L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKV--NFAHFPRLISL 235
Query: 318 KEIRLSNNYLELIES--DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ L N + ++ S D +NL++++ LS N ++ ++ F+ + ++ ++ L N++
Sbjct: 236 HSLCLRRNKVAIVVSSLDWVWNLEKMD---LSGNEIEYMEPHVFETVPHLQSLQLDSNRL 292
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
Y+ P + +L + L N L D NV
Sbjct: 293 TYVEPRILNSWKSLTSITLAGN-LWDCGRNV 322
Score = 169 (64.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 66/265 (24%), Positives = 121/265 (45%)
Query: 210 HLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEW 269
+L L LSL +N L EL + F +L L + + S + + + L ++
Sbjct: 63 NLSGLLGLSLRYNSLS--ELRAGQFTGLMQLTWLYLDHNHICSVQGDAF---QKLRRVKE 117
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + +N I + N + + +L ++L YNK+ + +LFH + K L + + N ++
Sbjct: 118 LTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFH-GLRK-LTTLHMRANAIQF 175
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F + + L + + YN LKS+ SF L + + L N + + F L +L
Sbjct: 176 VPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISL 235
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L L+ NK+ V S++ ++LS N I + + + P +++SL L +N
Sbjct: 236 HSLCLRRNKVAI----VVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVP-HLQSLQLDSN 290
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFN 474
R+ V L ++ SL + L N
Sbjct: 291 RLTYVEPRILNSWK-SLTSITLAGN 314
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + E+ T L LYLD N I + AF L ++ L+L N I +
Sbjct: 70 LSLRYNSLSELRAGQF-TGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQL 128
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIE 562
TF MPNL+ +DLS+N++ L + F+ KL L++ N ++ +P +F + ++
Sbjct: 129 ANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLK 188
Query: 563 KLDISYNQDK 572
LDI YNQ K
Sbjct: 189 FLDIGYNQLK 198
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 48/210 (22%), Positives = 93/210 (44%)
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
NL+ +L + L +N + + F L L L L N + + F + + L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVK---ELT 119
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
LS+N IT L + P ++S+DLS N++Q + + L L++ N I+ +
Sbjct: 120 LSSNQITQLANTTFRPMP-NLRSVDLSYNKLQALAPDLFHGLR-KLTTLHMRANAIQFVP 177
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
F + L+ L + +N + + + +F G+ L + L N++ + F L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHS 237
Query: 541 LNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
L + N++ + + +EK+D+S N+
Sbjct: 238 LCLRRNKVAIVVSSLDWVWNLEKMDLSGNE 267
>UNIPROTKB|E2QW21 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AAEX03010953 RefSeq:XP_540204.1 ProteinModelPortal:E2QW21
Ensembl:ENSCAFT00000012896 GeneID:483089 KEGG:cfa:483089
NextBio:20857544 Uniprot:E2QW21
Length = 522
Score = 214 (80.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 67/260 (25%), Positives = 130/260 (50%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
NL+ L L++ N++ +R L L ++ L++N I + + F + +R+KE+ L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQ-KL-RRVKELTL 120
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S+N + + + TF + L ++ LSYN L+++ F L + + + N I+++
Sbjct: 121 SSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRI 180
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F + +L LD+ N+LK N F+ + K T ++L N+ + + + + I +
Sbjct: 181 FQDCRSLKFLDIGYNQLKSLARNSFAGLF-KLTELHLE-HNDLVKVNFAHFPRL--ISLH 236
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
SL L N++ V V+ L + +L K+ L NEI++++ F + L+ L L+ N +
Sbjct: 237 SLCLKRNKVAIV-VSSLD-WVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTY 294
Query: 503 VVKRTFIGMPNLQIIDLSFN 522
+ R +L I L+ N
Sbjct: 295 IEPRILNSWKSLTSITLAGN 314
Score = 193 (73.0 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 65/237 (27%), Positives = 114/237 (48%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N L + + F L +L + L +N + S++ +F+ L + + LS NQI +
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLA 129
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAP 438
F +PNL +DL NKL+ ++F + T M N ++++ +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRS--- 186
Query: 439 IYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+K LD+ N+++ + N F F L +L+L+ N++ ++ F L L L L+
Sbjct: 187 --LKFLDIGYNQLKSLARNSFAGLF--KLTELHLEHNDLVKVNFAHFPRLISLHSLCLKR 242
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PR 553
N +A+VV + + NL+ +DLS NEI + F L+ L + NRL + PR
Sbjct: 243 NKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPR 298
Score = 193 (73.0 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 64/248 (25%), Positives = 123/248 (49%)
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
+NL+ L ++L YN +S++ F +L + L +N++ ++ D F L+ + +T
Sbjct: 62 HNLSGLLGLSLRYNSLSELRAG--QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELT 119
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N + + T+F+ + N+ ++ LS+N+++ + P+ F L L L ++ N ++ +
Sbjct: 120 LSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVR 179
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFAD 464
+F + S + L++ N + +L N A ++ + L L +N + V VNF F
Sbjct: 180 IFQDCRSLKF---LDIGYNQLKSLARNSF--AGLFKLTELHLEHNDL--VKVNFAH-FPR 231
Query: 465 --SLRKLYLDFNEIKHLDATAFGNLDV---LELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
SL L L N++ A +LD LE + L N I + F +P+LQ + L
Sbjct: 232 LISLHSLCLKRNKV----AIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQL 287
Query: 520 SFNEISML 527
N ++ +
Sbjct: 288 DSNRLTYI 295
Score = 173 (66.0 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 58/211 (27%), Positives = 107/211 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT L FR + NL+ + LS+NKLQ L ++F KL L + N+ +F
Sbjct: 123 NQITQLANTTFRPMPNLRSVDLSYNKLQA--LAPDLFHGLRKLTTLHMRS---NAIQFVP 177
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ ++ +L++L + N +K++ S L L ++LE+N + K+ N HF L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKV--NFAHFPRLISL 235
Query: 318 KEIRLSNNYLELIES--DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ L N + ++ S D +NL++++ LS N ++ ++ F+ + ++ ++ L N++
Sbjct: 236 HSLCLKRNKVAIVVSSLDWVWNLEKMD---LSGNEIEYMEPHVFETVPHLQSLQLDSNRL 292
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
YI P + +L + L N L D NV
Sbjct: 293 TYIEPRILNSWKSLTSITLAGN-LWDCGRNV 322
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 65/265 (24%), Positives = 122/265 (46%)
Query: 210 HLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEW 269
+L L LSL +N L EL + F +L L + + S + + + L ++
Sbjct: 63 NLSGLLGLSLRYNSLS--ELRAGQFTGLMQLTWLYLDHNHICSVQGDAF---QKLRRVKE 117
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + +N I + N + + +L ++L YNK+ + +LFH + K L + + +N ++
Sbjct: 118 LTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFH-GLRK-LTTLHMRSNAIQF 175
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F + + L + + YN LKS+ SF L + + L N + + F L +L
Sbjct: 176 VPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISL 235
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L L+ NK+ V S++ ++LS N I + + + P +++SL L +N
Sbjct: 236 HSLCLKRNKVAI----VVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVP-HLQSLQLDSN 290
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFN 474
R+ + L ++ SL + L N
Sbjct: 291 RLTYIEPRILNSWK-SLTSITLAGN 314
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + E+ T L LYLD N I + AF L ++ L+L N I +
Sbjct: 70 LSLRYNSLSELRAGQF-TGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQL 128
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIE 562
TF MPNL+ +DLS+N++ L + F+ KL L++ N ++ +P +F + ++
Sbjct: 129 ANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLK 188
Query: 563 KLDISYNQDK 572
LDI YNQ K
Sbjct: 189 FLDIGYNQLK 198
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 48/210 (22%), Positives = 93/210 (44%)
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
NL+ +L + L +N + + F L L L L N + + F + + L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVK---ELT 119
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
LS+N IT L + P ++S+DLS N++Q + + L L++ N I+ +
Sbjct: 120 LSSNQITQLANTTFRPMP-NLRSVDLSYNKLQALAPDLFHGLR-KLTTLHMRSNAIQFVP 177
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
F + L+ L + +N + + + +F G+ L + L N++ + F L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHS 237
Query: 541 LNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
L + N++ + + +EK+D+S N+
Sbjct: 238 LCLKRNKVAIVVSSLDWVWNLEKMDLSGNE 267
>TAIR|locus:2168907 [details] [associations]
symbol:XIP1 "XYLEM INTERMIXED WITH PHLOEM 1" species:3702
"Arabidopsis thaliana" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=ISS] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0010051 "xylem and
phloem pattern formation" evidence=IMP] [GO:0002237 "response to
molecule of bacterial origin" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010103 "stomatal
complex morphogenesis" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0048443
"stamen development" evidence=RCA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
SUPFAM:SSF56112 GO:GO:0004674 EMBL:AB025627 HSSP:P36897
GO:GO:0010051 InterPro:IPR013210 Pfam:PF08263 EMBL:AB025613
EMBL:FJ708796 IPI:IPI00541340 RefSeq:NP_199777.1 UniGene:At.21895
ProteinModelPortal:Q9FGL5 SMR:Q9FGL5 STRING:Q9FGL5 PRIDE:Q9FGL5
EnsemblPlants:AT5G49660.1 GeneID:835028 KEGG:ath:AT5G49660
KEGG:dosa:Os12t0632900-01 TAIR:At5g49660 InParanoid:Q9FGL5
OMA:SFHRISF ProtClustDB:CLSN2686988 Genevestigator:Q9FGL5
Uniprot:Q9FGL5
Length = 966
Score = 218 (81.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 90/346 (26%), Positives = 163/346 (47%)
Query: 234 FDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNY--SLYNLTSL 291
F + L+++++S++ F + FP I N L LE+L + N ++ S+ LT L
Sbjct: 141 FSQMKSLRVIDMSWNHFTGS-FPLSIFN--LTDLEYLNFNENPELDLWTLPDSVSKLTKL 197
Query: 292 NYINLEYNKISKIHNNLFHF--NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYN 349
++ L +H N+ N+ L ++ LS N+L NL L + L YN
Sbjct: 198 THMLL---MTCMLHGNIPRSIGNLTS-LVDLELSGNFLSGEIPKEIGNLSNLRQLELYYN 253
Query: 350 --LLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVF 407
L SI NL N+ +I +S +++ P++ +LPNL L L +N L +
Sbjct: 254 YHLTGSIPE-EIGNLKNLTDIDISVSRLTGSIPDSICSLPNLRVLQLYNNSLTG---EIP 309
Query: 408 SNITSKQTPMNLNLSNNYITN-LYENDKKQAPIYIKSLDLSNNRIQ-EVPVNFLQTFADS 465
++ + +T L+L +NY+T L N +P+ +LD+S NR+ +P + ++
Sbjct: 310 KSLGNSKTLKILSLYDNYLTGELPPNLGSSSPMI--ALDVSENRLSGPLPAHVCKS-GKL 366
Query: 466 LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEIS 525
L L L N +G+ L + N + + + + +P++ IIDL++N +S
Sbjct: 367 LYFLVLQ-NRFTGSIPETYGSCKTLIRFRVASNRLVGTIPQGVMSLPHVSIIDLAYNSLS 425
Query: 526 MLTGEQFYFSFKLRILNISHNRLRS-LPRDVFSNTIIEKLDISYNQ 570
++ L L + NR+ +P ++ +T + KLD+S NQ
Sbjct: 426 GPIPNAIGNAWNLSELFMQSNRISGVIPHELSHSTNLVKLDLSNNQ 471
Score = 122 (48.0 bits), Expect = 0.00083, P = 0.00083
Identities = 88/384 (22%), Positives = 155/384 (40%)
Query: 199 KITDLNGNLFR-----HLYNLQELS-LSFNK---LQIIELNSNVFDVFEKLQLLEISFSL 249
++ D++ N F ++NL +L L+FN+ L + L +V + KL + + +
Sbjct: 148 RVIDMSWNHFTGSFPLSIFNLTDLEYLNFNENPELDLWTLPDSVSKL-TKLTHMLLMTCM 206
Query: 250 FNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK--ISKIHNN 307
+ N P I NL +L L + N + + NL++L + L YN I
Sbjct: 207 LHGN-IPRSI--GNLTSLVDLELSGNFLSGEIPKEIGNLSNLRQLELYYNYHLTGSIPEE 263
Query: 308 LFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLN 367
+ + K L +I +S + L D+ +L L + L N L S N +
Sbjct: 264 IGNL---KNLTDIDISVSRLTGSIPDSICSLPNLRVLQLYNNSLTGEIPKSLGNSKTLKI 320
Query: 368 IVLSFNQIK-YIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYI 426
+ L N + + PN + P ++ LD+ +N+L + +++ + + N
Sbjct: 321 LSLYDNYLTGELPPNLGSSSP-MIALDVSENRLSG---PLPAHVCKSGKLLYFLVLQNRF 376
Query: 427 TNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGN 486
T I+ SN + +P + S+ + L +N + A GN
Sbjct: 377 TGSIPETYGSCKTLIRFRVASNRLVGTIPQGVMSLPHVSI--IDLAYNSLSGPIPNAIGN 434
Query: 487 LDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
L L ++ N I+ V+ NL +DLS N++S + KL +L + N
Sbjct: 435 AWNLSELFMQSNRISGVIPHELSHSTNLVKLDLSNNQLSGPIPSEVGRLRKLNLLVLQGN 494
Query: 547 RLRSLPRDVFSNT-IIEKLDISYN 569
L S D SN + LD+S N
Sbjct: 495 HLDSSIPDSLSNLKSLNVLDLSSN 518
>UNIPROTKB|G3N2B1 [details] [associations]
symbol:PHLPP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009649 "entrainment of circadian clock" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001932 Pfam:PF00481 PROSITE:PS51450
SMART:SM00332 GO:GO:0003824 GO:GO:0009649 GO:GO:0008152
Gene3D:3.60.40.10 SUPFAM:SSF81606 GeneTree:ENSGT00440000037833
OMA:CCELSAG EMBL:DAAA02057241 EMBL:DAAA02057242 EMBL:DAAA02057243
EMBL:DAAA02057244 Ensembl:ENSBTAT00000066319 Uniprot:G3N2B1
Length = 1176
Score = 219 (82.2 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 97/393 (24%), Positives = 189/393 (48%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQ---IIELNSNVFDV--FEKLQLLEISFSLFN 251
C + L NLF + +L L+L N L+ + + ++ F KL+ L +S + +
Sbjct: 130 CCSLEHLPANLF-YSQDLTHLNLKQNFLRQNPSLPTARGLSELQRFTKLKSLNLSNN--H 186
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+FP + N + TL L M N ++ + ++ + +L L+ N + + L
Sbjct: 187 LGDFPLAVCN--IPTLAELNMSCNALRAVPA-AVGAMHNLQTFLLDGNFLQTLPAELE-- 241
Query: 312 NIHKRLKEIRLS-NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
N+H+ L + LS N + +L E L + + +S N + +++ + + + ++ ++ L
Sbjct: 242 NMHQ-LSYLGLSFNEFTDLPE--VLQKLTAVEKLCMSGNCVGTLRLQALRKMPHIKHVDL 298
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN----LNLSNNYI 426
N I+ + + LP++ +LDL+DNKL+ + VF+N+ N LN ++
Sbjct: 299 RLNVIRNLIADGVDFLPHVTQLDLRDNKLEGLDAVVFTNLEVLHCERNQLVTLNACGCFL 358
Query: 427 TNLY--ENDKKQ-----APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
LY N+ Q P Y+ +D+S N ++ VP ++ L L + N+I L
Sbjct: 359 KALYASSNELVQLDVCPVPNYLSYMDVSRNCLENVPEWVCES--RKLEVLDIGHNQICEL 416
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
A F N + +LL+ HN +A + + + +++++D+ N++ L + LR
Sbjct: 417 PARLFCNSSLRKLLA-GHNRMARLPES--LERTSVEVLDVQHNQLLELPPSLLMKADSLR 473
Query: 540 ILNISHNRLRSLPRDVFS---NTIIEKLDISYN 569
LN S N+L +LP S N+I+++L ++ N
Sbjct: 474 FLNASANKLETLPPATLSEETNSILQELYLTNN 506
Score = 199 (75.1 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 88/365 (24%), Positives = 177/365 (48%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
++NLQ L N LQ + + +L L +SF+ F + P +L K L +E L
Sbjct: 220 MHNLQTFLLDGNFLQTLPAE---LENMHQLSYLGLSFNEFT--DLPE-VLQK-LTAVEKL 272
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELI 330
M N + +R +L + + +++L N I + + F H + ++ L +N LE +
Sbjct: 273 CMSGNCVGTLRLQALRKMPHIKHVDLRLNVIRNLIADGVDFLPH--VTQLDLRDNKLEGL 330
Query: 331 ESDTFYNLKELNT-----ITLSYN--LLKSIKTTSFKNLNNMLNIVLSFNQIKY--IYPN 381
++ F NL+ L+ +TL+ LK++ +S N L++ N + Y + N
Sbjct: 331 DAVVFTNLEVLHCERNQLVTLNACGCFLKALYASS--NELVQLDVCPVPNYLSYMDVSRN 388
Query: 382 AFVNLPNLV----KLDLQD---NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDK 434
N+P V KL++ D N++ + +F N + ++ L +N + L E+ +
Sbjct: 389 CLENVPEWVCESRKLEVLDIGHNQICELPARLFCNSSLRK----LLAGHNRMARLPESLE 444
Query: 435 KQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD-ATAFGNLD-VLEL 492
+ + ++ LD+ +N++ E+P + L ADSLR L N+++ L AT + +L+
Sbjct: 445 RTS---VEVLDVQHNQLLELPPSLLMK-ADSLRFLNASANKLETLPPATLSEETNSILQE 500
Query: 493 LSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
L L +NN+ G P+L+++ +++N + + +L +++S N+L+++P
Sbjct: 501 LYLTNNNLTDKCVSLLTGHPHLKVLHMAYNRLQSFPASKMAKLEELEEIDLSGNKLKAVP 560
Query: 553 RDVFS 557
+ +
Sbjct: 561 TTIMN 565
Score = 166 (63.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 77/307 (25%), Positives = 143/307 (46%)
Query: 284 SLYNLTSLNYINLEYNKISK-----IHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNL 338
+L+ L ++NL+ N + + L +LK + LSNN+L N+
Sbjct: 139 NLFYSQDLTHLNLKQNFLRQNPSLPTARGLSELQRFTKLKSLNLSNNHLGDFPL-AVCNI 197
Query: 339 KELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
L + +S N L+++ + ++N+ +L N ++ + P N+ L L L N+
Sbjct: 198 PTLAELNMSCNALRAVPA-AVGAMHNLQTFLLDGNFLQTL-PAELENMHQLSYLGLSFNE 255
Query: 399 LKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNF 458
D V +T+ + L +S N + L ++ P +IK +DL N I+ + +
Sbjct: 256 FTDLP-EVLQKLTAVE---KLCMSGNCVGTLRLQALRKMP-HIKHVDLRLNVIRNLIADG 310
Query: 459 LQTFADSLRKLYLDFNEIKHLDATAFGNLDVL-----ELLSLE---------HNNIAVVV 504
+ F + +L L N+++ LDA F NL+VL +L++L + + +V
Sbjct: 311 VD-FLPHVTQLDLRDNKLEGLDAVVFTNLEVLHCERNQLVTLNACGCFLKALYASSNELV 369
Query: 505 KRTFIGMPN-LQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
+ +PN L +D+S N + + E S KL +L+I HN++ LP +F N+ + K
Sbjct: 370 QLDVCPVPNYLSYMDVSRNCLENVP-EWVCESRKLEVLDIGHNQICELPARLFCNSSLRK 428
Query: 564 LDISYNQ 570
L +N+
Sbjct: 429 LLAGHNR 435
Score = 163 (62.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 82/324 (25%), Positives = 130/324 (40%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYS-LYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
+LN + N ++ R S L T L +NL N + L NI L E+
Sbjct: 148 HLNLKQNFLRQNPSLPTARGLSELQRFTKLKSLNLSNNHLGDFP--LAVCNI-PTLAELN 204
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
+S N L + + + L T L N L+++ +N++ + + LSFN+ + P
Sbjct: 205 MSCNALRAVPA-AVGAMHNLQTFLLDGNFLQTLPA-ELENMHQLSYLGLSFNEFTDL-PE 261
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPMNLNLSNN----------YITNLY 430
L + KL + N + L + K + LN+ N ++T L
Sbjct: 262 VLQKLTAVEKLCMSGNCVGTLRLQALRKMPHIKHVDLRLNVIRNLIADGVDFLPHVTQLD 321
Query: 431 ENDKK----QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGN 486
D K A ++ L R Q V +N F L+ LY NE+ LD N
Sbjct: 322 LRDNKLEGLDAVVFTNLEVLHCERNQLVTLNACGCF---LKALYASSNELVQLDVCPVPN 378
Query: 487 LDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN 546
L + + N + V + L+++D+ N+I L F S LR L HN
Sbjct: 379 Y--LSYMDVSRNCLENVPEWVCESR-KLEVLDIGHNQICELPARLFCNS-SLRKLLAGHN 434
Query: 547 RLRSLPRDVFSNTIIEKLDISYNQ 570
R+ LP + T +E LD+ +NQ
Sbjct: 435 RMARLPESL-ERTSVEVLDVQHNQ 457
>ZFIN|ZDB-GENE-050208-523 [details] [associations]
symbol:shoc2 "soc-2 suppressor of clear homolog (C.
elegans)" species:7955 "Danio rerio" [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA;ISS] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 ZFIN:ZDB-GENE-050208-523 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 EMBL:CR450802 GO:GO:0019903
GO:GO:0000164 HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236
CTD:8036 OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38
EMBL:AL772158 EMBL:BC125839 EMBL:BC155579 IPI:IPI00487368
IPI:IPI00817688 RefSeq:NP_001038251.1 UniGene:Dr.68831
ProteinModelPortal:Q1L8Y7 Ensembl:ENSDART00000059882
Ensembl:ENSDART00000125215 GeneID:555476 KEGG:dre:555476
InParanoid:Q1L8Y7 NextBio:20880997 Bgee:Q1L8Y7 Uniprot:Q1L8Y7
Length = 561
Score = 214 (80.4 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 95/373 (25%), Positives = 176/373 (47%)
Query: 196 RCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEF 255
R N+IT + ++ ++L L LS+ NK++ +L + ++ E L+ + +
Sbjct: 179 RFNRITTVEKDI-KNLSKLTMLSIRENKIK--QLPA---EIGELCNLITLDVAHNQLEHL 232
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHK 315
P I N + L + +N++ ++ ++ NL S+N + L YN++S I +L +
Sbjct: 233 PKEI--GNCTQITNLDLQHNDLLDLPE-TIGNLASINRLGLRYNRLSAIPRSLAKC---R 286
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
L+E+ L NN + ++ +L L ++TL+ N +S + + ++ + N+I
Sbjct: 287 ELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRI 346
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
I F L KL+++DN+L L+ F TS + LNL+ N +T + E+
Sbjct: 347 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM---VELNLATNQLTKIPEDIC- 401
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+ ++ L LSNN ++++P LR+L L+ N+++ L L L+ L L
Sbjct: 402 -GLVSLEMLTLSNNLLKKLPYGIGNL--RKLRELDLEENKLESLP-NEIAYLKDLQKLVL 457
Query: 496 EHNNIAVVVKRTFIG-MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHN-RLRSLPR 553
+N + + + IG + NL + L N + L E+ L L ++ N L SLP
Sbjct: 458 TNNQLTTLPRG--IGHLTNLTYLGLGENLLQHLP-EEIGTLENLEDLYLNDNPNLHSLP- 513
Query: 554 DVFSNTIIEKLDI 566
F + KL I
Sbjct: 514 --FELALCSKLSI 524
Score = 198 (74.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 77/321 (23%), Positives = 146/321 (45%)
Query: 264 LNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLS 323
L+ L LA+ N++ ++ + SL NL L ++L +NK+ +I ++ + L + L
Sbjct: 124 LSGLVTLALSENSLTSLPD-SLDNLKKLRMLDLRHNKLREIPAVVYRVS---SLTTLYLR 179
Query: 324 NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAF 383
N + +E D NL +L +++ N +K + L N++ + ++ NQ++++ P
Sbjct: 180 FNRITTVEKD-IKNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHL-PKEI 236
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
N + LDLQ N L D + N+ S L L N ++ + + K + +
Sbjct: 237 GNCTQITNLDLQHNDLLDLPETI-GNLASIN---RLGLRYNRLSAIPRSLAKCREL--EE 290
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L+L NN I +P L + + L L L N + + L++EHN I +
Sbjct: 291 LNLENNNISVLPEGLLSSLVN-LTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKI 349
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEK 563
F L +++ N+++ L + ++ + LN++ N+L +P D+ +E
Sbjct: 350 PFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE-LNLATNQLTKIPEDICGLVSLEM 408
Query: 564 LDISYNQDKIRPGRESNPRPI 584
L +S N K P N R +
Sbjct: 409 LTLSNNLLKKLPYGIGNLRKL 429
Score = 184 (69.8 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 95/381 (24%), Positives = 179/381 (46%)
Query: 211 LYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWL 270
L L L+LS N L + + D +KL++L++ + E P + +++L L
Sbjct: 124 LSGLVTLALSENSLTSLP---DSLDNLKKLRMLDLRHNKLR--EIPAVVYR--VSSLTTL 176
Query: 271 AMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHN------NLFHFNI-HKRL----KE 319
+ N I + + NL+ L +++ NKI ++ NL ++ H +L KE
Sbjct: 177 YLRFNRITTVEK-DIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 235
Query: 320 I----RLSN---NYLELIE-SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
I +++N + +L++ +T NL +N + L YN L +I S + + L
Sbjct: 236 IGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPR-SLAKCRELEELNLE 294
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N I + +L NL L L N + + + S + T +LN+ +N I +
Sbjct: 295 NNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFS---TIYSLNMEHNRINKIPF 351
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
+A + K L++ +N++ +P++F T+ S+ +L L N++ + G L LE
Sbjct: 352 GIFSRAKVLSK-LNMKDNQLTSLPLDF-GTWT-SMVELNLATNQLTKIPEDICG-LVSLE 407
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQII---DLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
+L+L +N ++K+ G+ NL+ + DL N++ L E Y L+ L +++N+L
Sbjct: 408 MLTLSNN----LLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQL 462
Query: 549 RSLPRDVFSNTIIEKLDISYN 569
+LPR + T + L + N
Sbjct: 463 TTLPRGIGHLTNLTYLGLGEN 483
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 93/386 (24%), Positives = 165/386 (42%)
Query: 3 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQL----QGIFN-SKLRELEITGKDLK 57
LDL HNKL + A +Y ++ L T L+ +++ + I N SKL L I +K
Sbjct: 153 LDLRHNKLREIP-AVVY----RVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIK 207
Query: 58 FIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMT-LDLSHNKLSVLNMATL 116
+ P+ + C +TL + + Q+E LP +I N Q+T LDL HN L L++
Sbjct: 208 QL-PAEIGEL--CNLITLDVAHNQLEHLPK----EIGNCTQITNLDLQHNDL--LDLPET 258
Query: 117 YSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLN--GNLFRHLQKSIVKAKKN-- 172
N+ + LG R +C ++ +LN N L + ++ + N
Sbjct: 259 IGNLASINRLGL-----RYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLT 313
Query: 173 -----NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQII 227
N + N+I + +F L +L++ N+L +
Sbjct: 314 SLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 373
Query: 228 ELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYN 287
L+ + ++E++ + + P I L +LE L + NN +K + Y + N
Sbjct: 374 PLDFGTWT-----SMVELNLATNQLTKIPEDICG--LVSLEMLTLSNNLLKKLP-YGIGN 425
Query: 288 LTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLS 347
L L ++LE NK+ + N + + K L+++ L+NN L + + L L + L
Sbjct: 426 LRKLRELDLEENKLESLPNEIAYL---KDLQKLVLTNNQLTTLPRGIGH-LTNLTYLGLG 481
Query: 348 YNLLKSIKTTSFKNLNNMLNIVLSFN 373
NLL+ + L N+ ++ L+ N
Sbjct: 482 ENLLQHLPE-EIGTLENLEDLYLNDN 506
Score = 179 (68.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 94/382 (24%), Positives = 176/382 (46%)
Query: 209 RHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLE 268
+ L L EL L NKLQ + L L E S + P + NL L
Sbjct: 99 KELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLT-----SLPDSL--DNLKKLR 151
Query: 269 WLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE 328
L + +N ++ I +Y ++SL + L +N+I+ + ++ N+ K L + + N ++
Sbjct: 152 MLDLRHNKLREIPAV-VYRVSSLTTLYLRFNRITTVEKDIK--NLSK-LTMLSIRENKIK 207
Query: 329 LIESDTFYNLKELNTITLSYNLLKSI-----KTTSFKNL----NNMLNI------VLSFN 373
+ ++ L L T+ +++N L+ + T NL N++L++ + S N
Sbjct: 208 QLPAE-IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASIN 266
Query: 374 QIKYIYPNAFVNLP-NLVKL-DLQDNKLKDFNLNVFSN--ITSKQTPMNLNLSNNYITNL 429
++ Y N +P +L K +L++ L++ N++V ++S +L L+ N +
Sbjct: 267 RLGLRY-NRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSY 325
Query: 430 YENDKKQ-APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLD 488
Q + IY SL++ +NRI ++P A L KL + N++ L FG
Sbjct: 326 PVGGPSQFSTIY--SLNMEHNRINKIPFGIFSR-AKVLSKLNMKDNQLTSLPLD-FGTWT 381
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
+ L+L N + + + G+ +L+++ LS N + L KLR L++ N+L
Sbjct: 382 SMVELNLATNQLTKIPE-DICGLVSLEMLTLSNNLLKKLPYGIGNLR-KLRELDLEENKL 439
Query: 549 RSLPRDVFSNTIIEKLDISYNQ 570
SLP ++ ++KL ++ NQ
Sbjct: 440 ESLPNEIAYLKDLQKLVLTNNQ 461
Score = 161 (61.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 67/228 (29%), Positives = 109/228 (47%)
Query: 352 KSIKTTSFKNLN-----NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
KS K LN N + + LS I ++ P++ L L +L L NKL+ V
Sbjct: 63 KSSNAEVIKELNKCREENSMRLDLSKRSI-HLLPSSIKELTQLTELYLYSNKLQSLPPEV 121
Query: 407 FSNITSKQTPMNLNLSNNYITNL---YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFA 463
++ T L LS N +T+L +N KK ++ LDL +N+++E+P +
Sbjct: 122 -GCLSGLVT---LALSENSLTSLPDSLDNLKK-----LRMLDLRHNKLREIPAVVYRV-- 170
Query: 464 DSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIG-MPNLQIIDLSFN 522
SL LYL FN I ++ NL L +LS+ N I + IG + NL +D++ N
Sbjct: 171 SSLTTLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAE--IGELCNLITLDVAHN 227
Query: 523 EISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
++ L E + ++ L++ HN L LP + + I +L + YN+
Sbjct: 228 QLEHLPKEIGNCT-QITNLDLQHNDLLDLPETIGNLASINRLGLRYNR 274
Score = 159 (61.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 99/403 (24%), Positives = 173/403 (42%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N +T L +L +L L+ L L NKL+ E+ + V+ V L L + F+ + E
Sbjct: 135 NSLTSLPDSL-DNLKKLRMLDLRHNKLR--EIPAVVYRV-SSLTTLYLRFNRITTVEKDI 190
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
KNL+ L L++ N IK + + L +L +++ +N++ + + + ++
Sbjct: 191 ----KNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPKEIGNCT---QI 242
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ L +N L L +T NL +N + L YN L +I S + + L N I
Sbjct: 243 TNLDLQHNDL-LDLPETIGNLASINRLGLRYNRLSAIPR-SLAKCRELEELNLENNNISV 300
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNL---NVFSNITSKQTPMN-LN------LSNNYIT 427
+ +L NL L L N + + + + FS I S N +N S +
Sbjct: 301 LPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL 360
Query: 428 ---NLYENDKKQAPI------YIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
N+ +N P+ + L+L+ N++ ++P + SL L L N +K
Sbjct: 361 SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLV--SLEMLTLSNNLLKK 418
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
L GNL L L LE N + + + +LQ + L+ N+++ L + + L
Sbjct: 419 LPY-GIGNLRKLRELDLEENKLESLPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHLT-NL 475
Query: 539 RILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGRESNP 581
L + N L+ LP ++ + +E L+ Y D P S P
Sbjct: 476 TYLGLGENLLQHLPEEIGT---LENLEDLYLNDN--PNLHSLP 513
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 124/501 (24%), Positives = 216/501 (43%)
Query: 49 LEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKL 108
L+++ + + + PS+ + +L L + +++ LP + + + +TL LS N L
Sbjct: 84 LDLSKRSIHLL-PSSIKELTQLTELYLY--SNKLQSLPPEV-GCLSGL--VTLALSENSL 137
Query: 109 SVLNMATLYSNVTKLQHLGTTILKDREKXXXXXXXXXXRCNKITDLNGNLFRHLQKSIVK 168
+ ++ N+ KL+ L K RE R + +T L R + + V+
Sbjct: 138 T--SLPDSLDNLKKLRMLDLRHNKLRE-----IPAVVYRVSSLTTL---YLRFNRITTVE 187
Query: 169 AKKNNNNNEDQVSDRE-KXXXXXXXXXXRCNKIT-DLNGNLFRHLYNLQELSLSFNKLQI 226
N + +S RE K CN IT D+ N HL +E+ + ++
Sbjct: 188 KDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLP--KEIG-NCTQITN 244
Query: 227 IELNSN-VFDVFEKL-QLLEIS-FSL-FNS-NEFPYYILNKNLNTLEWLAMDNNNIKNIR 281
++L N + D+ E + L I+ L +N + P + LE L ++NNNI +
Sbjct: 245 LDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAK--CRELEELNLENNNISVLP 302
Query: 282 N---YSLYNLTSL--------NY-------------INLEYNKISKIHNNLFHFNIHKRL 317
SL NLTSL +Y +N+E+N+I+KI +F + K L
Sbjct: 303 EGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIF--SRAKVL 360
Query: 318 KEIRLSNNYLELIESD--TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
++ + +N L + D T+ ++ ELN T N L I L ++ + LS N +
Sbjct: 361 SKLNMKDNQLTSLPLDFGTWTSMVELNLAT---NQLTKIPE-DICGLVSLEMLTLSNNLL 416
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
K + P NL L +LDL++NKL+ N + + Q L L+NN +T L
Sbjct: 417 KKL-PYGIGNLRKLRELDLEENKLESLP-NEIAYLKDLQ---KLVLTNNQLTTLPRGIGH 471
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+ L L N +Q +P + T ++L LYL+ N H L ++S+
Sbjct: 472 LTNLTY--LGLGENLLQHLPEE-IGTL-ENLEDLYLNDNPNLHSLPFELALCSKLSIMSI 527
Query: 496 EHNNIAVVVKRTFIGMPNLQI 516
E+ ++ + + G P+ I
Sbjct: 528 ENCPLSHLPPQIVAGGPSFII 548
>ZFIN|ZDB-GENE-110125-1 [details] [associations]
symbol:rxfp1 "relaxin/insulin-like family peptide
receptor 1" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 ZFIN:ZDB-GENE-110125-1 GO:GO:0016021
GO:GO:0004930 InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 CTD:59350 KO:K04306 EMBL:HM135955
IPI:IPI00969701 RefSeq:NP_001177863.1 UniGene:Dr.159212
ProteinModelPortal:D9IDV5 GeneID:100498669 KEGG:dre:100498669
Uniprot:D9IDV5
Length = 748
Score = 216 (81.1 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 67/235 (28%), Positives = 114/235 (48%)
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
L N L + +D F + L + L +N +KS+ +F+ L N+ + LS+N+I + P+
Sbjct: 130 LQRNGLRKLNADMFLKYQSLQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYNRITTLLPD 189
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
F +L L L L++N L + FS + S + L L NN +T L ++ + P +
Sbjct: 190 VFQDLHKLEWLILENNSLHHISSLTFSGLRSL---VLLVLLNNALTKL-DDICLEMP-RL 244
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
LD+ N+++ V N + L L L N I + A AF L L L L N I
Sbjct: 245 NWLDIEGNKMETVG-NVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGELDLSSNRIE 303
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVF 556
+ F+ + +L +++S+N I L + F KL+ L+I + ++ R +F
Sbjct: 304 AIPPDLFVNLGDLLQLNISYNPIMNLRVDHFDKLHKLKSLSIEGIEIGNIHRRMF 358
Score = 199 (75.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 71/299 (23%), Positives = 137/299 (45%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N + LN ++F +LQ+L L N+++ + + F L L +S++ + P
Sbjct: 133 NGLRKLNADMFLKYQSLQKLYLQHNRIKSV--HPQAFRGLYNLTRLYLSYNRITTL-LPD 189
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
++L+ LEWL ++NN++ +I + + L SL + L N ++K+ + RL
Sbjct: 190 VF--QDLHKLEWLILENNSLHHISSLTFSGLRSLVLLVLLNNALTKLDDICLEM---PRL 244
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + N +E + + TF + L + L N + I +F L + + LS N+I+
Sbjct: 245 NWLDIEGNKMETVGNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGELDLSSNRIEA 304
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS-KQTPMN-LNLSNNYITNLYENDKK 435
I P+ FVNL +L++L++ N + + ++ F + K + + + N + ++E K
Sbjct: 305 IPPDLFVNLGDLLQLNISYNPIMNLRVDHFDKLHKLKSLSIEGIEIGNIH-RRMFEPLKN 363
Query: 436 QAPIYIKSLDLSNNR--IQEVPVNF--LQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
IY K ++ N + +F D L + L T FGN+ V+
Sbjct: 364 LTHIYFKKFQYCGYAPYVRSCKPNTDGISSFEDLLANIVLRVFVWAVSATTCFGNIFVI 422
Score = 197 (74.4 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 63/247 (25%), Positives = 116/247 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
+++ N ++ + SL + L++N+I +H F ++ L + LS N +
Sbjct: 128 MSLQRNGLRKLNADMFLKYQSLQKLYLQHNRIKSVHPQAFR-GLYN-LTRLYLSYNRITT 185
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ D F +L +L + L N L I + +F L +++ +VL N + + + + +P L
Sbjct: 186 LLPDVFQDLHKLEWLILENNSLHHISSLTFSGLRSLVLLVLLNNALTKL-DDICLEMPRL 244
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMN--LNLSNNYITNLYENDKKQAPIYIKSLDLS 447
LD++ NK++ N+T + M L L N I+ ++ + LDLS
Sbjct: 245 NWLDIEGNKME-----TVGNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLR-KLGELDLS 298
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
+NRI+ +P + D L+ L + +N I +L F L L+ LS+E I + +R
Sbjct: 299 SNRIEAIPPDLFVNLGDLLQ-LNISYNPIMNLRVDHFDKLHKLKSLSIEGIEIGNIHRRM 357
Query: 508 FIGMPNL 514
F + NL
Sbjct: 358 FEPLKNL 364
Score = 161 (61.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 63/240 (26%), Positives = 116/240 (48%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N+ +SL N L+ +LN+++F ++ LQ L + + S P + L L L +
Sbjct: 124 NVTMMSLQRNGLR--KLNADMFLKYQSLQKLYLQHNRIKSVH-PQAF--RGLYNLTRLYL 178
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
N I + +L L ++ LE N + H + F+ + L + L NN L ++
Sbjct: 179 SYNRITTLLPDVFQDLHKLEWLILENNSLH--HISSLTFSGLRSLVLLVLLNNALTKLD- 235
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
D + LN + + N ++++ +F++ N + +VL N+I I+ AF L L +L
Sbjct: 236 DICLEMPRLNWLDIEGNKMETVGNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGEL 295
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYEN--DK--KQAPIYIKSLDLSN 448
DL N+++ ++F N+ + LN+S N I NL + DK K + I+ +++ N
Sbjct: 296 DLSSNRIEAIPPDLFVNLGDL---LQLNISYNPIMNLRVDHFDKLHKLKSLSIEGIEIGN 352
Score = 153 (58.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 63/209 (30%), Positives = 99/209 (47%)
Query: 364 NMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
N+ + L N ++ + + F+ +L KL LQ N++K + F + + L LS
Sbjct: 124 NVTMMSLQRNGLRKLNADMFLKYQSLQKLYLQHNRIKSVHPQAFRGLYNLT---RLYLSY 180
Query: 424 NYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFAD--SLRKLYLDFNEIKHLDA 481
N IT L D Q ++ L L NN + + + L TF+ SL L L N + LD
Sbjct: 181 NRITTLLP-DVFQDLHKLEWLILENNSLHHI--SSL-TFSGLRSLVLLVLLNNALTKLDD 236
Query: 482 TAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRIL 541
+ L L +E N + V TF L ++ L N IS + + F KL L
Sbjct: 237 ICL-EMPRLNWLDIEGNKMETVGNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGEL 295
Query: 542 NISHNRLRSLPRDVFSNT-IIEKLDISYN 569
++S NR+ ++P D+F N + +L+ISYN
Sbjct: 296 DLSSNRIEAIPPDLFVNLGDLLQLNISYN 324
Score = 131 (51.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 65/267 (24%), Positives = 125/267 (46%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L D + K++ S+ N+T ++ L+ N + K++ ++F ++ L+++ L +N ++
Sbjct: 108 LDCDGAHFKDVPMVSI-NVTMMS---LQRNGLRKLNADMFLK--YQSLQKLYLQHNRIKS 161
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F L L + LSYN + ++ F++L+ + ++L N + +I F L +L
Sbjct: 162 VHPQAFRGLYNLTRLYLSYNRITTLLPDVFQDLHKLEWLILENNSLHHISSLTFSGLRSL 221
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMN-LNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
V L L +N L + +I + +N L++ N + + N ++ + L L
Sbjct: 222 VLLVLLNNALTKLD-----DICLEMPRLNWLDIEGNKMETV-GNVTFRSCNMLTVLVLQR 275
Query: 449 NRIQEVPVNFLQTFADSLRKL-YLDF--NEIKHLDATAFGNLDVLELLSLEHNNIAVVVK 505
NRI + Q F+ LRKL LD N I+ + F NL L L++ +N I +
Sbjct: 276 NRISRIHA---QAFS-LLRKLGELDLSSNRIEAIPPDLFVNLGDLLQLNISYNPIMNLRV 331
Query: 506 RTFIGMPNLQIIDLSFNEISMLTGEQF 532
F + L+ + + EI + F
Sbjct: 332 DHFDKLHKLKSLSIEGIEIGNIHRRMF 358
>RGD|1302973 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor 1"
species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IEA;ISO]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IMP] [GO:0007567 "parturition"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030198
"extracellular matrix organization" evidence=IEA;ISO] [GO:0042562
"hormone binding" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060427 "lung connective tissue development"
evidence=IEA;ISO] [GO:0060658 "nipple morphogenesis"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 RGD:1302973 GO:GO:0016021 GO:GO:0005886 GO:GO:0030154
GO:GO:0046872 GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
HSSP:P01130 GO:GO:0060427 CTD:59350 HOVERGEN:HBG026354 KO:K04306
GO:GO:0060658 HOGENOM:HOG000049056 OrthoDB:EOG4NGGM1 EMBL:AY509976
IPI:IPI00409992 RefSeq:NP_958820.1 UniGene:Rn.109230
ProteinModelPortal:Q6R6I6 SMR:Q6R6I6 STRING:Q6R6I6
PhosphoSite:Q6R6I6 PRIDE:Q6R6I6 GeneID:295144 KEGG:rno:295144
UCSC:RGD:1302973 InParanoid:Q6R6I6 NextBio:639021
Genevestigator:Q6R6I6 Uniprot:Q6R6I6
Length = 758
Score = 216 (81.1 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 61/245 (24%), Positives = 118/245 (48%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
++ + + L N++ + ++F +L + L N ++S+ ++F+ L+++ + LS
Sbjct: 123 SVSSNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLS 182
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
N+I ++ P F +L L L ++DN L + F + S + L L NN +T L +
Sbjct: 183 HNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSL---ILLVLMNNALTRLPD 239
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
Q + LD NRI + N ++L L + N+I HL+ AF +L L+
Sbjct: 240 KPLCQHMPRLHWLDFEGNRIHNLR-NLTFISCNNLTVLVMRKNKINHLNEHAFTHLQKLD 298
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N I + F + L +++S+N I + QF + KL+ L++ + ++
Sbjct: 299 ELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDYLAKLKSLSLEGIEISNI 358
Query: 552 PRDVF 556
+ +F
Sbjct: 359 QQRMF 363
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 70/276 (25%), Positives = 126/276 (45%)
Query: 243 LEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKIS 302
LE+ N P N + +L+W N I+ + S L + L+ NKI
Sbjct: 109 LELDCDEANLRAVPSVSSNVTVMSLQW-----NFIRTLPPNSFRKYHDLQKLCLQNNKIR 163
Query: 303 KIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNL 362
+ + F +H L ++ LS+N + ++ F +L L + + N L I +F L
Sbjct: 164 SVSVSAFR-GLHS-LTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGL 221
Query: 363 NNMLNIVLSFNQIKYIYPNAFV-NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNL 421
N+++ +VL N + + ++P L LD + N++ NL + I+ + L +
Sbjct: 222 NSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIH--NLRNLTFISCNNLTV-LVM 278
Query: 422 SNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA 481
N I +L E+ + LDL +N+I+ +P N + + L +L + +N I+ ++
Sbjct: 279 RKNKINHLNEHAFTHLQ-KLDELDLGSNKIENLPPNIFKDLKE-LSQLNISYNPIQKIEV 336
Query: 482 TAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQII 517
F L L+ LSLE I+ + +R F + NL I
Sbjct: 337 NQFDYLAKLKSLSLEGIEISNIQQRMFRPLINLSHI 372
Score = 170 (64.9 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 64/297 (21%), Positives = 137/297 (46%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N+ +SL +N ++ + NS F + LQ L + + S + + L++L L +
Sbjct: 127 NVTVMSLQWNFIRTLPPNS--FRKYHDLQKLCLQNNKIRSVSVSAF---RGLHSLTKLYL 181
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES 332
+N I ++ +L L ++ +E N +S+I + L + ++ + + ++N L +
Sbjct: 182 SHNRITFLKPGVFEDLHRLEWLIIEDNHLSRI-SPLTFYGLNSLILLVLMNNALTRLPDK 240
Query: 333 DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKL 392
++ L+ + N + +++ +F + NN+ +V+ N+I ++ +AF +L L +L
Sbjct: 241 PLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHAFTHLQKLDEL 300
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ 452
DL NK+++ N+F ++ K+ LN+S N I + N +KSL L I
Sbjct: 301 DLGSNKIENLPPNIFKDL--KELSQ-LNISYNPIQKIEVNQFDYLA-KLKSLSLEGIEIS 356
Query: 453 EVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFI 509
+ + + + F + + + SLE N +A +++R F+
Sbjct: 357 NIQQRMFRPLINLSHIYFKKFQYCGYAPHVRSCKPNTDGISSLE-NLLASIIQRVFV 412
Score = 166 (63.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 60/210 (28%), Positives = 105/210 (50%)
Query: 363 NNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+N+ + L +N I+ + PN+F +L KL LQ+NK++ +++ F + S L LS
Sbjct: 126 SNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLT---KLYLS 182
Query: 423 NNYITNLYENDKKQAPIYIKSLDLSNNRIQEV-PVNFLQTFADSLRKLYLDFNEIKHL-D 480
+N IT L + ++ L + +N + + P+ F +SL L L N + L D
Sbjct: 183 HNRITFLKPGVFEDLH-RLEWLIIEDNHLSRISPLTFYGL--NSLILLVLMNNALTRLPD 239
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
++ L L E N I + TFI NL ++ + N+I+ L F KL
Sbjct: 240 KPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHAFTHLQKLDE 299
Query: 541 LNISHNRLRSLPRDVFSNTI-IEKLDISYN 569
L++ N++ +LP ++F + + +L+ISYN
Sbjct: 300 LDLGSNKIENLPPNIFKDLKELSQLNISYN 329
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 61/253 (24%), Positives = 119/253 (47%)
Query: 3 LDLSHNKLSVLNMATLYSNVT--KLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFID 60
L+L ++ ++ + ++ SNVT LQ L + + + L++L + ++ +
Sbjct: 109 LELDCDEANLRAVPSVSSNVTVMSLQWNFIRTLPPNSFRKYHD--LQKLCLQNNKIRSVS 166
Query: 61 PSAFDNIDACYDLT-LKITNTQIEELPSGLFDKIENIEQMTLDLSH-NKLSVLNMATLYS 118
SAF + + LT L +++ +I L G+F+ + +E + ++ +H +++S L L S
Sbjct: 167 VSAFRGL---HSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNS 223
Query: 119 NVTK-LQHLGTTILKDRE--KXXXXXXXXXXRCNKITDLNGNLF---RHLQKSIVKAKKN 172
+ L + T L D+ + N+I +L F +L +++ K
Sbjct: 224 LILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKI 283
Query: 173 NNNNEDQVSDREKXXXXXXXXXXRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232
N+ NE + +K NKI +L N+F+ L L +L++S+N +Q IE+N
Sbjct: 284 NHLNEHAFTHLQKLDELDLGS----NKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQ- 338
Query: 233 VFDVFEKLQLLEI 245
FD KL+ L +
Sbjct: 339 -FDYLAKLKSLSL 350
>UNIPROTKB|Q86UE6 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0035418 "protein
localization to synapse" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0060076 "excitatory synapse"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030426
"growth cone" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 EMBL:CH471053 GO:GO:0007610 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0035418 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG EMBL:AY182024
EMBL:AK056644 EMBL:AK290512 EMBL:AY358310 EMBL:BC045113
IPI:IPI00328716 RefSeq:NP_849161.2 UniGene:Hs.591580
ProteinModelPortal:Q86UE6 SMR:Q86UE6 MINT:MINT-7027295
STRING:Q86UE6 PhosphoSite:Q86UE6 DMDM:146330009 PRIDE:Q86UE6
DNASU:347730 Ensembl:ENST00000295057 Ensembl:ENST00000409148
Ensembl:ENST00000417012 Ensembl:ENST00000433224 GeneID:347730
KEGG:hsa:347730 UCSC:uc002sok.1 GeneCards:GC02M080427
H-InvDB:HIX0002207 HGNC:HGNC:19408 MIM:610867 neXtProt:NX_Q86UE6
PharmGKB:PA134887293 InParanoid:Q86UE6 OMA:EPDLFHG PhylomeDB:Q86UE6
GenomeRNAi:347730 NextBio:99250 ArrayExpress:Q86UE6 Bgee:Q86UE6
CleanEx:HS_LRRTM1 Genevestigator:Q86UE6 GermOnline:ENSG00000162951
Uniprot:Q86UE6
Length = 522
Score = 213 (80.0 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 67/260 (25%), Positives = 130/260 (50%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
NL+ L L++ N++ +R L L ++ L++N I + + F + +R+KE+ L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQ-KL-RRVKELTL 120
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S+N + + + TF + L ++ LSYN L+++ F L + + + N I+++
Sbjct: 121 SSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI 180
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F + +L LD+ N+LK N F+ + K T ++L N+ + + + + I +
Sbjct: 181 FQDCRSLKFLDIGYNQLKSLARNSFAGLF-KLTELHLE-HNDLVKVNFAHFPRL--ISLH 236
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
SL L N++ V V+ L + +L K+ L NEI++++ F + L+ L L+ N +
Sbjct: 237 SLCLRRNKVAIV-VSSLD-WVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTY 294
Query: 503 VVKRTFIGMPNLQIIDLSFN 522
+ R +L I L+ N
Sbjct: 295 IEPRILNSWKSLTSITLAGN 314
Score = 192 (72.6 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 65/237 (27%), Positives = 113/237 (47%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N L + + F L +L + L +N + S++ +F+ L + + LS NQI +
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLP 129
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAP 438
F +PNL +DL NKL+ ++F + T M N ++++ +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS--- 186
Query: 439 IYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+K LD+ N+++ + N F F L +L+L+ N++ ++ F L L L L
Sbjct: 187 --LKFLDIGYNQLKSLARNSFAGLF--KLTELHLEHNDLVKVNFAHFPRLISLHSLCLRR 242
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PR 553
N +A+VV + + NL+ +DLS NEI + F L+ L + NRL + PR
Sbjct: 243 NKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPR 298
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 64/248 (25%), Positives = 123/248 (49%)
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
+NL+ L ++L YN +S++ F +L + L +N++ ++ D F L+ + +T
Sbjct: 62 HNLSGLLGLSLRYNSLSELRAG--QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELT 119
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N + + T+F+ + N+ ++ LS+N+++ + P+ F L L L ++ N ++ +
Sbjct: 120 LSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVR 179
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFAD 464
+F + S + L++ N + +L N A ++ + L L +N + V VNF F
Sbjct: 180 IFQDCRSLKF---LDIGYNQLKSLARNSF--AGLFKLTELHLEHNDL--VKVNFAH-FPR 231
Query: 465 --SLRKLYLDFNEIKHLDATAFGNLDV---LELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
SL L L N++ A +LD LE + L N I + F +P+LQ + L
Sbjct: 232 LISLHSLCLRRNKV----AIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQL 287
Query: 520 SFNEISML 527
N ++ +
Sbjct: 288 DSNRLTYI 295
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 58/211 (27%), Positives = 107/211 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT L FR + NL+ + LS+NKLQ L ++F KL L + N+ +F
Sbjct: 123 NQITQLPNTTFRPMPNLRSVDLSYNKLQA--LAPDLFHGLRKLTTLHMRA---NAIQFVP 177
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ ++ +L++L + N +K++ S L L ++LE+N + K+ N HF L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKV--NFAHFPRLISL 235
Query: 318 KEIRLSNNYLELIES--DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ L N + ++ S D +NL++++ LS N ++ ++ F+ + ++ ++ L N++
Sbjct: 236 HSLCLRRNKVAIVVSSLDWVWNLEKMD---LSGNEIEYMEPHVFETVPHLQSLQLDSNRL 292
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
YI P + +L + L N L D NV
Sbjct: 293 TYIEPRILNSWKSLTSITLAGN-LWDCGRNV 322
Score = 167 (63.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 65/265 (24%), Positives = 121/265 (45%)
Query: 210 HLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEW 269
+L L LSL +N L EL + F +L L + + S + + + L ++
Sbjct: 63 NLSGLLGLSLRYNSLS--ELRAGQFTGLMQLTWLYLDHNHICSVQGDAF---QKLRRVKE 117
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + +N I + N + + +L ++L YNK+ + +LFH + K L + + N ++
Sbjct: 118 LTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFH-GLRK-LTTLHMRANAIQF 175
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F + + L + + YN LKS+ SF L + + L N + + F L +L
Sbjct: 176 VPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISL 235
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L L+ NK+ V S++ ++LS N I + + + P +++SL L +N
Sbjct: 236 HSLCLRRNKVAI----VVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVP-HLQSLQLDSN 290
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFN 474
R+ + L ++ SL + L N
Sbjct: 291 RLTYIEPRILNSWK-SLTSITLAGN 314
Score = 156 (60.0 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 47/164 (28%), Positives = 79/164 (48%)
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
NL L+ L L+ N L + F+ + L L +N+I ++ + D Q +K L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTW---LYLDHNHICSV-QGDAFQKLRRVKEL 118
Query: 445 DLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVV 504
LS+N+I ++P + + LR + L +N+++ L F L L L + N I V
Sbjct: 119 TLSSNQITQLPNTTFRPMPN-LRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVP 177
Query: 505 KRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
R F +L+ +D+ +N++ L F FKL L++ HN L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 155 (59.6 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + E+ T L LYLD N I + AF L ++ L+L N I +
Sbjct: 70 LSLRYNSLSELRAGQF-TGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQL 128
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIE 562
TF MPNL+ +DLS+N++ L + F+ KL L++ N ++ +P +F + ++
Sbjct: 129 PNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLK 188
Query: 563 KLDISYNQDK 572
LDI YNQ K
Sbjct: 189 FLDIGYNQLK 198
>UNIPROTKB|I3L5J3 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 KO:K16665 OMA:EPDLFHG EMBL:CU928791
RefSeq:XP_003125000.1 Ensembl:ENSSSCT00000025495 GeneID:100520483
KEGG:ssc:100520483 Uniprot:I3L5J3
Length = 522
Score = 213 (80.0 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 67/260 (25%), Positives = 130/260 (50%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRL 322
NL+ L L++ N++ +R L L ++ L++N I + + F + +R+KE+ L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQ-KL-RRVKELTL 120
Query: 323 SNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA 382
S+N + + + TF + L ++ LSYN L+++ F L + + + N I+++
Sbjct: 121 SSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI 180
Query: 383 FVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIK 442
F + +L LD+ N+LK N F+ + K T ++L N+ + + + + I +
Sbjct: 181 FQDCRSLKFLDIGYNQLKSLARNSFAGLF-KLTELHLE-HNDLVKVNFAHFPRL--ISLH 236
Query: 443 SLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAV 502
SL L N++ V V+ L + +L K+ L NEI++++ F + L+ L L+ N +
Sbjct: 237 SLCLRRNKVAIV-VSSLD-WVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTY 294
Query: 503 VVKRTFIGMPNLQIIDLSFN 522
+ R +L I L+ N
Sbjct: 295 IEPRILNSWKSLTSITLAGN 314
Score = 193 (73.0 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 65/237 (27%), Positives = 113/237 (47%)
Query: 320 IRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIY 379
+ L N L + + F L +L + L +N + S++ +F+ L + + LS NQI +
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLA 129
Query: 380 PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQT-PMNLNLSNNYITNLYENDKKQAP 438
F +PNL +DL NKL+ ++F + T M N ++++ +
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS--- 186
Query: 439 IYIKSLDLSNNRIQEVPVN-FLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+K LD+ N+++ + N F F L +L+L+ N++ ++ F L L L L
Sbjct: 187 --LKFLDIGYNQLKSLARNSFAGLF--KLTELHLEHNDLVKVNFAHFPRLISLHSLCLRR 242
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL-PR 553
N +A+VV + + NL+ +DLS NEI + F L+ L + NRL + PR
Sbjct: 243 NKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPR 298
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 64/248 (25%), Positives = 123/248 (49%)
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
+NL+ L ++L YN +S++ F +L + L +N++ ++ D F L+ + +T
Sbjct: 62 HNLSGLLGLSLRYNSLSELRAG--QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELT 119
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N + + T+F+ + N+ ++ LS+N+++ + P+ F L L L ++ N ++ +
Sbjct: 120 LSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVR 179
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY-IKSLDLSNNRIQEVPVNFLQTFAD 464
+F + S + L++ N + +L N A ++ + L L +N + V VNF F
Sbjct: 180 IFQDCRSLKF---LDIGYNQLKSLARNSF--AGLFKLTELHLEHNDL--VKVNFAH-FPR 231
Query: 465 --SLRKLYLDFNEIKHLDATAFGNLDV---LELLSLEHNNIAVVVKRTFIGMPNLQIIDL 519
SL L L N++ A +LD LE + L N I + F +P+LQ + L
Sbjct: 232 LISLHSLCLRRNKV----AIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQL 287
Query: 520 SFNEISML 527
N ++ +
Sbjct: 288 DSNRLTYI 295
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 58/211 (27%), Positives = 107/211 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
N+IT L FR + NL+ + LS+NKLQ L ++F KL L + N+ +F
Sbjct: 123 NQITQLANTTFRPMPNLRSVDLSYNKLQA--LAPDLFHGLRKLTTLHMRA---NAIQFVP 177
Query: 258 YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRL 317
+ ++ +L++L + N +K++ S L L ++LE+N + K+ N HF L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKV--NFAHFPRLISL 235
Query: 318 KEIRLSNNYLELIES--DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ L N + ++ S D +NL++++ LS N ++ ++ F+ + ++ ++ L N++
Sbjct: 236 HSLCLRRNKVAIVVSSLDWVWNLEKMD---LSGNEIEYMEPHVFETVPHLQSLQLDSNRL 292
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
YI P + +L + L N L D NV
Sbjct: 293 TYIEPRILNSWKSLTSITLAGN-LWDCGRNV 322
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 65/265 (24%), Positives = 121/265 (45%)
Query: 210 HLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEW 269
+L L LSL +N L EL + F +L L + + S + + + L ++
Sbjct: 63 NLSGLLGLSLRYNSLS--ELRAGQFTGLMQLTWLYLDHNHICSVQGDAF---QKLRRVKE 117
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + +N I + N + + +L ++L YNK+ + +LFH + K L + + N ++
Sbjct: 118 LTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFH-GLRK-LTTLHMRANAIQF 175
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNL 389
+ F + + L + + YN LKS+ SF L + + L N + + F L +L
Sbjct: 176 VPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISL 235
Query: 390 VKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNN 449
L L+ NK+ V S++ ++LS N I + + + P +++SL L +N
Sbjct: 236 HSLCLRRNKVAI----VVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVP-HLQSLQLDSN 290
Query: 450 RIQEVPVNFLQTFADSLRKLYLDFN 474
R+ + L ++ SL + L N
Sbjct: 291 RLTYIEPRILNSWK-SLTSITLAGN 314
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L L N + E+ T L LYLD N I + AF L ++ L+L N I +
Sbjct: 70 LSLRYNSLSELRAGQF-TGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQL 128
Query: 504 VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNT-IIE 562
TF MPNL+ +DLS+N++ L + F+ KL L++ N ++ +P +F + ++
Sbjct: 129 ANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLK 188
Query: 563 KLDISYNQDK 572
LDI YNQ K
Sbjct: 189 FLDIGYNQLK 198
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 48/210 (22%), Positives = 93/210 (44%)
Query: 361 NLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLN 420
NL+ +L + L +N + + F L L L L N + + F + + L
Sbjct: 63 NLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVK---ELT 119
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
LS+N IT L + P ++S+DLS N++Q + + L L++ N I+ +
Sbjct: 120 LSSNQITQLANTTFRPMP-NLRSVDLSYNKLQALAPDLFHGLR-KLTTLHMRANAIQFVP 177
Query: 481 ATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
F + L+ L + +N + + + +F G+ L + L N++ + F L
Sbjct: 178 VRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHS 237
Query: 541 LNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
L + N++ + + +EK+D+S N+
Sbjct: 238 LCLRRNKVAIVVSSLDWVWNLEKMDLSGNE 267
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 214 (80.4 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 67/235 (28%), Positives = 118/235 (50%)
Query: 289 TSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSY 348
T+ Y+NL+ N+I I + F H L+ ++LS N++ IE F L LNT+ L
Sbjct: 77 TNTRYLNLQDNQIQVIKVDSFKHLRH--LEILQLSRNHIRNIEIGAFNGLTSLNTLELFD 134
Query: 349 NLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK-LKDFNLNVF 407
N L +I +F+ L+ + + L N I+ I +AF LP+L +LDL + K L + F
Sbjct: 135 NRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAF 194
Query: 408 SNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLR 467
++ NL N + NL E Q I + L++S N++ + + + L+
Sbjct: 195 QGLS------NLRYLNLGMCNLKEVPNIQPLIRLDELEMSGNQLTVIQPSSFKGLVH-LQ 247
Query: 468 KLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
KL++ +++ ++ +F +L L L+L HNN+ + + + +LQ + L N
Sbjct: 248 KLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHLQRVHLHHN 302
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 60/214 (28%), Positives = 104/214 (48%)
Query: 262 KNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIR 321
K+L LE L + N+I+NI + LTSLN + L N+++ I N F + +LKE+
Sbjct: 98 KHLRHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYL--SKLKELW 155
Query: 322 LSNNYLELIESDTFYNLKELNTITLS-YNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYP 380
L NN +E I SD F L L + L L I + +F+ L+N+ + L +K + P
Sbjct: 156 LRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNLGMCNLKEV-P 214
Query: 381 NAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIY 440
N L L +L++ N+L + F + Q L + + + + N
Sbjct: 215 N-IQPLIRLDELEMSGNQLTVIQPSSFKGLVHLQ---KLWMMHAQVQTIERNSFDDLHS- 269
Query: 441 IKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFN 474
++ L+L++N + +P + L T L++++L N
Sbjct: 270 LRELNLAHNNLTFLPHD-LYTPLHHLQRVHLHHN 302
Score = 169 (64.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 60/216 (27%), Positives = 103/216 (47%)
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ L N ++ IK SFK+L ++ + LS N I+ I AF L +L L+L DN+L
Sbjct: 82 LNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIP 141
Query: 404 LNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN-NRIQEVPVNFLQTF 462
F ++ + L L NN I ++ + + P ++ LDL R+ + Q
Sbjct: 142 NGAFEYLSKLK---ELWLRNNPIESIPSDAFSRLPS-LRRLDLGELKRLSYISSGAFQGL 197
Query: 463 ADSLRKLYLDFNEIKHL-DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
++ LR L L +K + + LD LE+ N + V+ +F G+ +LQ + +
Sbjct: 198 SN-LRYLNLGMCNLKEVPNIQPLIRLDELEMSG---NQLTVIQPSSFKGLVHLQKLWMMH 253
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFS 557
++ + F LR LN++HN L LP D+++
Sbjct: 254 AQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYT 289
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 59/204 (28%), Positives = 102/204 (50%)
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNS-NVFDVFEKLQLLEISFSLFNSNEFP 256
N+I + + F+HL +L+ L LS N ++ IE+ + N L+L + + + F
Sbjct: 87 NQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFE 146
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL-EYNKISKIHNNLFHFNIHK 315
Y L+K L L WL NN I++I + + L SL ++L E ++S I + F +
Sbjct: 147 Y--LSK-LKEL-WLR--NNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNL 200
Query: 316 RLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
R + + N L E L L+ + +S N L I+ +SFK L ++ + + Q+
Sbjct: 201 RYLNLGMCN----LKEVPNIQPLIRLDELEMSGNQLTVIQPSSFKGLVHLQKLWMMHAQV 256
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKL 399
+ I N+F +L +L +L+L N L
Sbjct: 257 QTIERNSFDDLHSLRELNLAHNNL 280
Score = 148 (57.2 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 58/218 (26%), Positives = 106/218 (48%)
Query: 213 NLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAM 272
N + L+L N++Q+I+++S F L++L++S + + E + +LNTLE +
Sbjct: 78 NTRYLNLQDNQIQVIKVDS--FKHLRHLEILQLSRNHIRNIEIGAFNGLTSLNTLE---L 132
Query: 273 DNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN-NYLELIE 331
+N + I N + L+ L + L N I I ++ F + L+ + L L I
Sbjct: 133 FDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAF--SRLPSLRRLDLGELKRLSYIS 190
Query: 332 SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVK 391
S F L L + L LK + + + L + + +S NQ+ I P++F L +L K
Sbjct: 191 SGAFQGLSNLRYLNLGMCNLKEVP--NIQPLIRLDELEMSGNQLTVIQPSSFKGLVHLQK 248
Query: 392 LDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L + +++ N F ++ S + LNL++N +T L
Sbjct: 249 LWMMHAQVQTIERNSFDDLHSLR---ELNLAHNNLTFL 283
>UNIPROTKB|D4A5N5 [details] [associations]
symbol:Phlpp1 "PH domain leucine-rich repeat protein
phosphatase 1" species:10116 "Rattus norvegicus" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001849 InterPro:IPR001932 Pfam:PF00481 PROSITE:PS50003
PROSITE:PS51450 SMART:SM00233 SMART:SM00332 RGD:621308
GO:GO:0003824 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0008152 Gene3D:3.60.40.10 SUPFAM:SSF81606 IPI:IPI00948888
ProteinModelPortal:D4A5N5 Ensembl:ENSRNOT00000068491
ArrayExpress:D4A5N5 Uniprot:D4A5N5
Length = 1685
Score = 219 (82.2 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 98/408 (24%), Positives = 197/408 (48%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQ---IIELNSNVFDV--FEKLQLLEISFSLFN 251
C + L NLF + +L L+L N L+ + + ++ F KL+ L +S +
Sbjct: 601 CCSLEHLPANLF-YSQDLTHLNLKQNFLRQNPSLPAARGLGELQRFTKLKSLNLSNNHLG 659
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHF 311
+ FP + + + TL L + N ++ + ++ + +L L+ N + + L
Sbjct: 660 A--FPSAVCS--IPTLAELNVSCNALREVPA-AVGAMQNLQTFLLDGNFLQSLPAELE-- 712
Query: 312 NIHKRLKEIRLS-NNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
N+H+ L + LS N + ++ E L ++ + ++ N +++++ + + + ++ ++ L
Sbjct: 713 NMHQ-LSYLGLSFNEFTDIPE--VLEKLTAVDKLCMAGNCMETLRLQALRRMPHIKHVDL 769
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN----LNLSNNYI 426
N ++ + + L ++ +LDL+DNKL D + +F+NI N LN+ ++
Sbjct: 770 RLNILRKLITDEVDFLQHVTQLDLRDNKLGDLDAMIFNNIEVLHCERNQLVTLNICGYFL 829
Query: 427 TNLY--ENDKKQ-----APIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
LY N+ Q P Y+ +D+S N ++ VP ++ L L + N+I L
Sbjct: 830 KALYASSNELVQLDVYPVPNYLSYMDVSRNCLESVPEWVCES--RKLEVLDIGHNQICEL 887
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
A F N + +LL+ HN +A + +R + +++++D+ N+I L + LR
Sbjct: 888 PARLFCNSSLRKLLA-GHNRLARLPER--LERTSVEVLDVQHNQIIELPPNLLMKADSLR 944
Query: 540 ILNISHNRLRSLPRDVFS---NTIIEKLDISYNQ--DKIRPGRESNPR 582
LN S N+L +LP S ++I+++L ++ N DK P +PR
Sbjct: 945 FLNASANKLETLPPATLSEETSSILQELYLTNNSLTDKCVPLLTGHPR 992
Score = 189 (71.6 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 86/379 (22%), Positives = 177/379 (46%)
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
CN + ++ + + NLQ L N LQ + + +L L +SF+ F + P
Sbjct: 678 CNALREVPAAVGA-MQNLQTFLLDGNFLQSLPAE---LENMHQLSYLGLSFNEFT--DIP 731
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+L K L ++ L M N ++ +R +L + + +++L N + K+ + F H
Sbjct: 732 E-VLEK-LTAVDKLCMAGNCMETLRLQALRRMPHIKHVDLRLNILRKLITDEVDFLQH-- 787
Query: 317 LKEIRLSNNYLELIESDTFYNLKELN-------TITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ ++ L +N L +++ F N++ L+ T+ + LK++ +S N L++
Sbjct: 788 VTQLDLRDNKLGDLDAMIFNNIEVLHCERNQLVTLNICGYFLKALYASS--NELVQLDVY 845
Query: 370 LSFNQIKY--IYPNAFVNLPNLV----KLDLQD---NKLKDFNLNVFSNITSKQTPMNLN 420
N + Y + N ++P V KL++ D N++ + +F N + ++ L
Sbjct: 846 PVPNYLSYMDVSRNCLESVPEWVCESRKLEVLDIGHNQICELPARLFCNSSLRK----LL 901
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
+N + L E ++ + ++ LD+ +N+I E+P N L ADSLR L N+++ L
Sbjct: 902 AGHNRLARLPERLERTS---VEVLDVQHNQIIELPPNLLMK-ADSLRFLNASANKLETLP 957
Query: 481 ATAFGN--LDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKL 538
+L+ L L +N++ G P L+I+ +++N + + +L
Sbjct: 958 PATLSEETSSILQELYLTNNSLTDKCVPLLTGHPRLKILHMAYNRLQSFPASKMAKLEEL 1017
Query: 539 RILNISHNRLRSLPRDVFS 557
++IS N+L+++P + +
Sbjct: 1018 EEIDISGNKLKAIPTTIMN 1036
>TAIR|locus:2094603 [details] [associations]
symbol:RLP37 "receptor like protein 37" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263
EMBL:AB026655 HOGENOM:HOG000116562 ProtClustDB:CLSN2684197
IPI:IPI00538273 RefSeq:NP_188952.1 UniGene:At.65132
ProteinModelPortal:Q9LS80 SMR:Q9LS80 PRIDE:Q9LS80
EnsemblPlants:AT3G23110.1 GeneID:821886 KEGG:ath:AT3G23110
TAIR:At3g23110 InParanoid:Q9LS80 OMA:INCEWME PhylomeDB:Q9LS80
Genevestigator:Q9LS80 Uniprot:Q9LS80
Length = 835
Score = 215 (80.7 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 91/347 (26%), Positives = 157/347 (45%)
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
++ +S++F + L+ LE+S E P I NL+ L +L + N + S+
Sbjct: 102 LKSSSSLFKL-RHLRHLELSHCNLQG-EIPSSI--GNLSHLTYLDLSFNQLVGEFPVSIG 157
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD-TFYNLKELNTIT 345
NL L YI+L N + F N+ K L E+ L N + D NL L+ +
Sbjct: 158 NLNQLEYIDLWVNALGGNIPTSFA-NLTK-LSELHLRQN--QFTGGDIVLSNLTSLSIVD 213
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLN 405
LS N S + L+N+ +S N +P+ + +P+LV + L +N+ + +N
Sbjct: 214 LSSNYFNSTISADLSQLHNLERFWVSENSFFGPFPSFLLMIPSLVDICLSENQFEG-PIN 272
Query: 406 VFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ-EVPVNFLQTFAD 464
F N TS L++S N + L + ++ L+LS+N + +VP + +
Sbjct: 273 -FGNTTSSSKLTELDVSYNNLDGLIPKSISTL-VSLEHLELSHNNFRGQVPSSISKLV-- 328
Query: 465 SLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEI 524
+L LYL N ++ L LE L L HN+ V + + NL +DLS+N+
Sbjct: 329 NLDGLYLSHNNFGGQVPSSIFKLVNLEHLDLSHNDFGGRVPSSISKLVNLSSLDLSYNKF 388
Query: 525 SMLTGEQFYFSFKLRILNISHNRLRSLPR--DVFSNTIIEKLDISYN 569
+ + S KL +++S+N S R ++ ++ D+S N
Sbjct: 389 EGHVPQCIWRSSKLDSVDLSYNSFNSFGRILELGDESLERDWDLSSN 435
Score = 192 (72.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 81/311 (26%), Positives = 136/311 (43%)
Query: 263 NLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEY-NKISKIHNNLFHFNIHKRLKEIR 321
+LN + ++A N ++K+ + SL+ L L ++ L + N +I +++ + + H L +
Sbjct: 90 SLNLVSYIA--NTSLKS--SSSLFKLRHLRHLELSHCNLQGEIPSSIGNLS-H--LTYLD 142
Query: 322 LSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN 381
LS N L + NL +L I L N L TSF NL + + L NQ +
Sbjct: 143 LSFNQLVGEFPVSIGNLNQLEYIDLWVNALGGNIPTSFANLTKLSELHLRQNQ----FTG 198
Query: 382 AFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYI 441
+ L NL L + D FN + ++++ +S N + + P +
Sbjct: 199 GDIVLSNLTSLSIVDLSSNYFNSTISADLSQLHNLERFWVSENSFFGPFPSFLLMIPSLV 258
Query: 442 KSLDLSNNRIQEVPVNFLQTFADS-LRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNI 500
+ LS N+ E P+NF T + S L +L + +N + L + L LE L L HNN
Sbjct: 259 -DICLSENQF-EGPINFGNTTSSSKLTELDVSYNNLDGLIPKSISTLVSLEHLELSHNNF 316
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS-LPRDVFSNT 559
V + + NL + LS N + L L++SHN +P +
Sbjct: 317 RGQVPSSISKLVNLDGLYLSHNNFGGQVPSSIFKLVNLEHLDLSHNDFGGRVPSSISKLV 376
Query: 560 IIEKLDISYNQ 570
+ LD+SYN+
Sbjct: 377 NLSSLDLSYNK 387
Score = 187 (70.9 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 83/323 (25%), Positives = 142/323 (43%)
Query: 254 EFPYYILNKN-LNTLEW-LAMDNNNIKNIR-NYSLYNLTSLNYINLEYNKISKIHNNLFH 310
EFP + + + TL W +D + + + + +L + SLN ++ N K ++LF
Sbjct: 51 EFPIHSNGSHHVTTLSWNKTVDCCSWEGVTCDATLGEVISLNLVSYIANTSLKSSSSLFK 110
Query: 311 FNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
+ L+ + LS+ L+ + NL L + LS+N L S NLN + I L
Sbjct: 111 L---RHLRHLELSHCNLQGEIPSSIGNLSHLTYLDLSFNQLVGEFPVSIGNLNQLEYIDL 167
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
N + P +F NL L +L L+ N+ ++ V SN+TS ++LS+NY +
Sbjct: 168 WVNALGGNIPTSFANLTKLSELHLRQNQFTGGDI-VLSNLTSLSI---VDLSSNYFNSTI 223
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNL--- 487
D Q + N+ P +FL SL + L N+ + FGN
Sbjct: 224 SADLSQLHNLERFWVSENSFFGPFP-SFL-LMIPSLVDICLSENQFE--GPINFGNTTSS 279
Query: 488 DVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR 547
L L + +NN+ ++ ++ + +L+ ++LS N L L +SHN
Sbjct: 280 SKLTELDVSYNNLDGLIPKSISTLVSLEHLELSHNNFRGQVPSSISKLVNLDGLYLSHNN 339
Query: 548 LRS-LPRDVFSNTIIEKLDISYN 569
+P +F +E LD+S+N
Sbjct: 340 FGGQVPSSIFKLVNLEHLDLSHN 362
WARNING: HSPs involving 968 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 584 564 0.00078 120 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1218
No. of states in DFA: 600 (64 KB)
Total size of DFA: 264 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.49u 0.08s 63.57t Elapsed: 00:00:13
Total cpu time: 63.94u 0.09s 64.03t Elapsed: 00:00:14
Start: Thu Aug 15 11:05:28 2013 End: Thu Aug 15 11:05:42 2013
WARNINGS ISSUED: 2