RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11648
(584 letters)
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Length = 305
Score = 78.5 bits (192), Expect = 2e-16
Identities = 54/266 (20%), Positives = 111/266 (41%), Gaps = 17/266 (6%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLS 371
++ + L NN + I+ F NLK L+T+ L N + I +F L + + LS
Sbjct: 28 DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYE 431
NQ+K + L L + + K++ N + + + N S+ ++
Sbjct: 88 KNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 147
Query: 432 NDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLE 491
KK + + +++ I +P SL +L+LD N+I +DA + L+ L
Sbjct: 148 GMKK-----LSYIRIADTNITTIPQGLPP----SLTELHLDGNKITKVDAASLKGLNNLA 198
Query: 492 LLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSL 551
L L N+I+ V + P+L+ + L+ N++ + G ++++ + +N + ++
Sbjct: 199 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADH-KYIQVVYLHNNNISAI 257
Query: 552 PRDVFS-------NTIIEKLDISYNQ 570
+ F + + N
Sbjct: 258 GSNDFCPPGYNTKKASYSGVSLFSNP 283
Score = 76.6 bits (187), Expect = 6e-16
Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 15/286 (5%)
Query: 186 LLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
L + L L+ NKIT++ F++L NL L L NK+ I F KL+ L +
Sbjct: 29 LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKIS--PGAFAPLVKLERLYL 86
Query: 246 SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
S + + K TL+ L + N I +R L + + L N +
Sbjct: 87 SKNQLKE------LPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 140
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM 365
F K+L IR+++ + I +L EL+ L N + + S K LNN+
Sbjct: 141 IENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELH---LDGNKITKVDAASLKGLNNL 197
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNY 425
+ LSFN I + + N P+L +L L +NKL + + + + L NN
Sbjct: 198 AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQ----VVYLHNNN 253
Query: 426 ITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYL 471
I+ + ND K S + PV + + + R +Y+
Sbjct: 254 ISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYV 299
Score = 67.4 bits (163), Expect = 7e-13
Identities = 57/270 (21%), Positives = 100/270 (37%), Gaps = 22/270 (8%)
Query: 266 TLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
L + NN I I++ NL +L+ + L NKISKI F +L+ + LS N
Sbjct: 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPL--VKLERLYLSKN 89
Query: 326 YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI--YPNAF 383
L+ + L+EL N + ++ + F LN M+ + L N +K AF
Sbjct: 90 QLKELPEKMPKTLQELRV---HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 146
Query: 384 VNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKS 443
+ L + + D + + ++T L+L N IT + + +
Sbjct: 147 QGMKKLSYIRIADTNITTIPQGLPPSLTE------LHLDGNKITK-VDAASLKGLNNLAK 199
Query: 444 LDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV 503
L LS N I V L + +K + ++++ L +NNI+ +
Sbjct: 200 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGG--LADHKYIQVVYLHNNNISAI 257
Query: 504 VKRTFIG------MPNLQIIDLSFNEISML 527
F + + L N +
Sbjct: 258 GSNDFCPPGYNTKKASYSGVSLFSNPVQYW 287
Score = 46.6 bits (109), Expect = 4e-06
Identities = 54/309 (17%), Positives = 97/309 (31%), Gaps = 44/309 (14%)
Query: 46 LRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSH 105
L++ + I F N+ + L L I ++ G F + +E L LS
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNK--ISKISPGAFAPLVKLE--RLYLSK 88
Query: 106 NKLSVL--NMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQ 163
N+L L M + ++ T + K L+ + + L N +
Sbjct: 89 NQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG 148
Query: 164 KSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNK 223
+ + + N + + L +L L L NKIT ++ + L NL +L LS
Sbjct: 149 MKKLSYIRIADTNITTIP--QGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLS--- 203
Query: 224 LQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNY 283
++ + NNN
Sbjct: 204 ---------------------------FNSISAVDNGSLANTPHLRELHLNNNKLVKVPG 236
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLF----HFNIHKRLKEIRLSNNYLEL--IESDTFYN 337
L + + + L N IS I +N F + + L +N ++ I+ TF
Sbjct: 237 GLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 296
Query: 338 LKELNTITL 346
+ + L
Sbjct: 297 VYVRAAVQL 305
Score = 45.4 bits (106), Expect = 9e-06
Identities = 41/263 (15%), Positives = 92/263 (34%), Gaps = 33/263 (12%)
Query: 2 TLDLSHNKLSVLNMATL-----------------------YSNVTKLQHLGTTILKGDQL 38
LDL +NK++ + ++ + KL+ L + + +L
Sbjct: 35 LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL 94
Query: 39 QGIFNSKLRELEITGKDLKFIDPSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQ 98
L+EL + ++ + S F+ ++ + L + + +G F ++ +
Sbjct: 95 PEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSY 154
Query: 99 MTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETL-LLRCNKITDLNGN 157
+ ++ ++ + ++T+L G I K L L L L + + +
Sbjct: 155 I--RIADTNITTIPQGLP-PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVD 211
Query: 158 LFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLF------RHL 211
++ NNN +V ++ + L N I+ + N F
Sbjct: 212 NGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKK 271
Query: 212 YNLQELSLSFNKLQIIELNSNVF 234
+ +SL N +Q E+ + F
Sbjct: 272 ASYSGVSLFSNPVQYWEIQPSTF 294
Score = 30.4 bits (67), Expect = 0.54
Identities = 39/251 (15%), Positives = 86/251 (34%), Gaps = 37/251 (14%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDP 61
TL L +NK+S ++ + + KL+ L + + +L L+EL + ++ +
Sbjct: 59 TLILINNKISKISPGAF-APLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRK 117
Query: 62 SAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVT 121
S F+ ++ + L + + +G F ++ + + ++ ++ + ++T
Sbjct: 118 SVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI--RIADTNITTIPQGLP-PSLT 174
Query: 122 KLQHLGTTILKDREKLLSNLETL-LLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQV 180
+L G I K L L L L + + + ++ NNN +V
Sbjct: 175 ELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV 234
Query: 181 SDREKLLSNLETLLLRCNKITDLNGNL--------------------------------F 208
++ + L N I+ + N F
Sbjct: 235 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTF 294
Query: 209 RHLYNLQELSL 219
R +Y + L
Sbjct: 295 RCVYVRAAVQL 305
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes
[TaxId: 1639]}
Length = 384
Score = 64.3 bits (155), Expect = 1e-11
Identities = 83/403 (20%), Positives = 151/403 (37%), Gaps = 44/403 (10%)
Query: 167 VKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQI 226
+K N D VS + L + TL I ++G +L NL +++ S N+L
Sbjct: 25 MKTVLGKTNVTDTVSQTD--LDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTD 80
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
I N KL + ++ + + N TL + + +
Sbjct: 81 ITPLKN----LTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN--- 133
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL 346
N++ N + + L ++ + ++ + NL L + +
Sbjct: 134 -----------LNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 182
Query: 347 SYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
S N K + L N+ +++ + NQI I P + NL +L L N+LKD
Sbjct: 183 SSN--KVSDISVLAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDI---- 234
Query: 407 FSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSL 466
+ S +L+L+NN I+NL + L L N+I + A
Sbjct: 235 -GTLASLTNLTDLDLANNQISNLAPLSGLT---KLTELKLGANQISNIS-----PLAGLT 285
Query: 467 RKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISM 526
L+ NE + D + NL L L+L NNI+ + + LQ + + N++S
Sbjct: 286 ALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD 343
Query: 527 LTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
+ + L+ HN++ L + + T I +L ++
Sbjct: 344 V--SSLANLTNINWLSAGHNQISDLT-PLANLTRITQLGLNDQ 383
Score = 47.7 bits (112), Expect = 2e-06
Identities = 64/370 (17%), Positives = 129/370 (34%), Gaps = 39/370 (10%)
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
I ++ + +F L E ++ + +L+ + L D IK+I +
Sbjct: 6 ITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG--VE 63
Query: 287 NLTSLNYINLEYNKISKIHN-----NLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKEL 341
L +L IN N+++ I L ++ L + T +N +
Sbjct: 64 YLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQIT 123
Query: 342 NTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD 401
+ L + S ++++ + + + + N +L L L +
Sbjct: 124 DIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDIS 183
Query: 402 FNLNVFSNITSK-QTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQ 460
N ++ +K +L +NN I+++ + L L+ N+++++
Sbjct: 184 SNKVSDISVLAKLTNLESLIATNNQISDITPLGILT---NLDELSLNGNQLKDIGTLASL 240
Query: 461 TFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVV----------------- 503
T +L L L N+I +L L L L L N I+ +
Sbjct: 241 T---NLTDLDLANNQISNL--APLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 295
Query: 504 ---VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI 560
+ NL + L FN IS + KL+ L ++N++ + + + T
Sbjct: 296 QLEDISPISNLKNLTYLTLYFNNISDI--SPVSSLTKLQRLFFANNKVSDVS-SLANLTN 352
Query: 561 IEKLDISYNQ 570
I L +NQ
Sbjct: 353 INWLSAGHNQ 362
Score = 44.2 bits (103), Expect = 3e-05
Identities = 61/357 (17%), Positives = 136/357 (38%), Gaps = 55/357 (15%)
Query: 92 KIENIEQMT----LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLR 147
I+ +E + ++ S+N+L+ + T N+TKL + + + T L
Sbjct: 58 SIDGVEYLNNLTQINFSNNQLTDI---TPLKNLTKLVDILMNNNQIADITPLANLTNLTG 114
Query: 148 CNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNL 207
+ ++ + + + ++N + + + +
Sbjct: 115 LTLFNNQITDIDPLKNLTNLNRLELSSNT-------------ISDISALSGLTSLQQLSF 161
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
+ +L+ L+ ++ ++ V D+ +L + + +N+ L L
Sbjct: 162 GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNL 221
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYL 327
+ L+++ N +K+I +L +LT+L ++L N+IS NL + +L E++L N +
Sbjct: 222 DELSLNGNQLKDIG--TLASLTNLTDLDLANNQIS----NLAPLSGLTKLTELKLGANQI 275
Query: 328 ELIES--------------------DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLN 367
I NLK L +TL +N + I + +L +
Sbjct: 276 SNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDI--SPVSSLTKLQR 333
Query: 368 IVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+ + N++ ++ NL N+ L N++ D L +N+T L L++
Sbjct: 334 LFFANNKVSD--VSSLANLTNINWLSAGHNQISD--LTPLANLTRITQ---LGLNDQ 383
Score = 27.3 bits (59), Expect = 5.4
Identities = 32/155 (20%), Positives = 54/155 (34%), Gaps = 13/155 (8%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDP 61
L L+ N+L + +N+T L I L G+ L EL++ + I P
Sbjct: 223 ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTK--LTELKLGANQISNISP 280
Query: 62 SAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVT 121
LT E + L L N +S ++ + + +
Sbjct: 281 --------LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQ 332
Query: 122 KLQHLGTTILKDREKL--LSNLETLLLRCNKITDL 154
+L + D L L+N+ L N+I+DL
Sbjct: 333 RL-FFANNKVSDVSSLANLTNINWLSAGHNQISDL 366
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 57.5 bits (137), Expect = 1e-09
Identities = 47/260 (18%), Positives = 83/260 (31%), Gaps = 30/260 (11%)
Query: 312 NIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT-LSYNLLKSIKTTSFKNLNNMLNIVL 370
I + I L N + + + +F + L + S L + +
Sbjct: 29 GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
Q++ + P F L L L L +
Sbjct: 89 DNAQLRSVDPATFHGLGRLHTLHL----------------------------DRCGLQEL 120
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVL 490
+ ++ L L +N +Q +P + + +L L+L N I + AF L L
Sbjct: 121 GPGLFRGLAALQYLYLQDNALQALPDDTFRDL-GNLTHLFLHGNRISSVPERAFRGLHSL 179
Query: 491 ELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
+ L L N +A V F + L + L N +S L E L+ L ++ N
Sbjct: 180 DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239
Query: 551 LPRDVFSNTIIEKLDISYNQ 570
R ++K S ++
Sbjct: 240 DCRARPLWAWLQKFRGSSSE 259
Score = 56.4 bits (134), Expect = 3e-09
Identities = 46/251 (18%), Positives = 92/251 (36%), Gaps = 29/251 (11%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF--------------- 309
+ + + N I ++ S +L + L N +++I F
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 310 --------HFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKN 361
F+ RL + L L+ + F L L + L N L+++ +F++
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 362 LNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNL 421
L N+ ++ L N+I + AF L +L +L L N++ + + F ++ M L L
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL---GRLMTLYL 208
Query: 422 SNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDA 481
N ++ L + ++ L L++N + L+K +E+
Sbjct: 209 FANNLSALP-TEALAPLRALQYLRLNDNPWVCDCR--ARPLWAWLQKFRGSSSEVPCSLP 265
Query: 482 TAFGNLDVLEL 492
D+ L
Sbjct: 266 QRLAGRDLKRL 276
Score = 56.0 bits (133), Expect = 3e-09
Identities = 47/229 (20%), Positives = 86/229 (37%), Gaps = 8/229 (3%)
Query: 343 TITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF 402
T + L+++ I L N+I ++ +F NL +
Sbjct: 15 TTSCPQQGLQAVPVGIPAASQR---IFLHGNRISHVPAASFRACRNL---TILWLHSNVL 68
Query: 403 NLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTF 462
+ T L+LS+N + + +L L +QE+
Sbjct: 69 ARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGL-FRG 127
Query: 463 ADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFN 522
+L+ LYL N ++ L F +L L L L N I+ V +R F G+ +L + L N
Sbjct: 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 187
Query: 523 EISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTI-IEKLDISYNQ 570
++ + F +L L + N L +LP + + ++ L ++ N
Sbjct: 188 RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236
Score = 56.0 bits (133), Expect = 3e-09
Identities = 43/265 (16%), Positives = 92/265 (34%), Gaps = 13/265 (4%)
Query: 137 LLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLR 196
+ + + + L N+I+ + FR + + +N + L + L
Sbjct: 30 IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
++ ++ F L L L L LQ + +F L L+ + N+ +
Sbjct: 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELG-----PGLFRGLAALQYLYLQDNALQAL 144
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
++L L L + N I ++ + L SL+ + L N+++ +H + F
Sbjct: 145 PDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLM 204
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYN-LLKSIKTTSFKNLNNMLNIVLSFNQI 375
+ L N L + ++ L+ L + L+ N + + + S +++
Sbjct: 205 --TLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPL--WAWLQKFRGSSSEV 260
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLK 400
P L N L+
Sbjct: 261 PCSLPQRLAGRD---LKRLAANDLQ 282
Score = 29.4 bits (64), Expect = 1.2
Identities = 43/225 (19%), Positives = 71/225 (31%), Gaps = 23/225 (10%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDP 61
+ L N++S + A+ + + + F ++ D +
Sbjct: 36 RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRS 95
Query: 62 SAFDNIDACYDL-TLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNV 120
L TL + ++EL GLF + ++ + L N L L T
Sbjct: 96 VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ--DNALQALPDDTFRDLG 153
Query: 121 TKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQV 180
NL L L N+I+ + FR L S+ + + N
Sbjct: 154 -------------------NLTHLFLHGNRISSVPERAFRGL-HSLDRLLLHQNRVAHVH 193
Query: 181 SDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQ 225
+ L L TL L N ++ L L LQ L L+ N
Sbjct: 194 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 51.4 bits (121), Expect = 8e-08
Identities = 45/235 (19%), Positives = 79/235 (33%), Gaps = 6/235 (2%)
Query: 318 KEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKY 377
+ + + I SD N EL L+ I+ +F ++ I +
Sbjct: 11 RVFLCQESKVTEIPSDLPRNAIELR---FVLTKLRVIQKGAFSGFGDLEKIEI-SQNDVL 66
Query: 378 IYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQA 437
A V +++ K + + L +SN I +L + K +
Sbjct: 67 EVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHS 126
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+ N I + N + L+L+ N I+ + AF + EL ++
Sbjct: 127 LQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDN 186
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
NN+ + F G I+D+S I L KLR + L+ LP
Sbjct: 187 NNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP 239
Score = 50.3 bits (118), Expect = 2e-07
Identities = 33/213 (15%), Positives = 72/213 (33%), Gaps = 3/213 (1%)
Query: 186 LLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
L N L K+ + F +L+++ +S N + +L EI
Sbjct: 27 LPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE---VIEADVFSNLPKLHEI 83
Query: 246 SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
N+ + +NL L++L + N IK++ + + ++++ N
Sbjct: 84 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTI 143
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM 365
+ + L+ N ++ I + F + N L+ + F +
Sbjct: 144 ERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGP 203
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNK 398
+ + +S +I + NL L + K
Sbjct: 204 VILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
Score = 47.6 bits (111), Expect = 1e-06
Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 4/217 (1%)
Query: 342 NTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKD 401
+ + I + +N + +++ I AF +L K+++ N + +
Sbjct: 11 RVFLCQESKVTEIPSDLPRNAIE---LRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 67
Query: 402 FNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQT 461
+ K + + +NN + E + + + + V+ + +
Sbjct: 68 VIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLIS-NTGIKHLPDVHKIHS 126
Query: 462 FADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSF 521
L + + N + G +L L N I + F G ++
Sbjct: 127 LQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDN 186
Query: 522 NEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
N + L + F+ + IL+IS R+ SLP N
Sbjct: 187 NNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 223
Score = 47.6 bits (111), Expect = 1e-06
Identities = 35/234 (14%), Positives = 69/234 (29%), Gaps = 6/234 (2%)
Query: 189 NLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFS 248
+ L + +K+T++ +L R N EL KL+ + F F L+ +EIS +
Sbjct: 9 SNRVFLCQESKVTEIPSDLPR---NAIELRFVLTKLR--VIQKGAFSGFGDLEKIEISQN 63
Query: 249 LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNL 308
N + NN + + +
Sbjct: 64 DVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 123
Query: 309 FHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNI 368
H L + N + + E + L+ N ++ I +F
Sbjct: 124 IHSLQKVLLDIQD-NINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELN 182
Query: 369 VLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLS 422
+ N ++ + + F V LD+ ++ N+ + NL
Sbjct: 183 LSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
Score = 38.0 bits (86), Expect = 0.002
Identities = 25/218 (11%), Positives = 53/218 (24%), Gaps = 6/218 (2%)
Query: 137 LLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLR 196
L N L K+ + F +K + D + E + + L
Sbjct: 27 LPRNAIELRFVLTKLRVIQKGAFSGFGDL----EKIEISQNDVLEVIEADVFSNLPKLHE 82
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N +L + + + + N N
Sbjct: 83 IRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHT 142
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ + E + + N ++ + + + F+
Sbjct: 143 IERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASG 202
Query: 317 LKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
+ +S + + S NLK+L S LK +
Sbjct: 203 PVILDISRTRIHSLPSYGLENLKKLR--ARSTYNLKKL 238
Score = 36.0 bits (81), Expect = 0.007
Identities = 30/239 (12%), Positives = 68/239 (28%), Gaps = 18/239 (7%)
Query: 70 CYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTT 129
C + +++ E+PS L L KL V+ + L
Sbjct: 8 CSNRVFLCQESKVTEIPSDLPRNAI-----ELRFVLTKLRVIQKGAF----SGFGDLEKI 58
Query: 130 ILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSN 189
+ + L + K+ ++ +L +A +N N + + +
Sbjct: 59 EISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHL 118
Query: 190 LETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELN--------SNVFDVFEKLQ 241
+ + + L+ +++ ++ S + + L +
Sbjct: 119 PDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQL 178
Query: 242 LLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNK 300
N E P + + L + I ++ +Y L NL L + K
Sbjct: 179 DELNLSDNNNLEELPNDVF-HGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
Score = 29.1 bits (63), Expect = 1.3
Identities = 5/32 (15%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 539 RILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
R+ +++ +P D+ N +L +
Sbjct: 11 RVFLCQESKVTEIPSDLPRNA--IELRFVLTK 40
Score = 26.8 bits (57), Expect = 6.5
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILK 34
LD+S ++ L L N+ KL+ T LK
Sbjct: 205 ILDISRTRIHSLPSYGL-ENLKKLRARSTYNLK 236
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of
glycoprotein Ib alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 266
Score = 50.5 bits (119), Expect = 2e-07
Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 11/212 (5%)
Query: 358 SFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPM 417
+ + L + + + P+ + L L +N L F+L T
Sbjct: 5 EVSKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQ-- 59
Query: 418 NLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK 477
LNL +T L + + + + + FN +
Sbjct: 60 -LNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVL-----DVSFNRLT 113
Query: 478 HLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
L A L L+ L L+ N + + P L+ + L+ N ++ L
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLEN 173
Query: 538 LRILNISHNRLRSLPRDVFSNTIIEKLDISYN 569
L L + N L ++P+ F + ++ + N
Sbjct: 174 LDTLLLQENSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 45.5 bits (106), Expect = 9e-06
Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 35/214 (16%)
Query: 186 LLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
L + L L N + + L +L+L
Sbjct: 29 LPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA----------------------- 65
Query: 246 SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
+ TL L + + +++ L T L+ +
Sbjct: 66 -----------ELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTS 114
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM 365
L L+E+ L N L+ + +L ++L+ N L + L N+
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENL 174
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKL 399
++L N + I F L L N
Sbjct: 175 DTLLLQENSLYTIPKGFF-GSHLLPFAFLHGNPW 207
Score = 44.7 bits (104), Expect = 1e-05
Identities = 32/179 (17%), Positives = 55/179 (30%), Gaps = 23/179 (12%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF--------------- 309
L + N + +L T L +NL+ +++K+ +
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ 90
Query: 310 ----HFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM 365
L + +S N L + L EL + L N LK++ +
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNN 424
+ L+ N + + L NL L LQ+N L F + L N
Sbjct: 151 EKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPF----AFLHGN 205
Score = 41.6 bits (96), Expect = 1e-04
Identities = 35/189 (18%), Positives = 58/189 (30%), Gaps = 12/189 (6%)
Query: 137 LLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLR 196
L + L L N + + + + N + E + L L TL L
Sbjct: 29 LPKDTTILHLSENLLYTFSLATLMPYTRLT---QLNLDRAELTKLQVDGTLPVLGTLDLS 85
Query: 197 CNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFP 256
N++ L + + L S L L+ + N +
Sbjct: 86 HNQLQSLPLLGQTLPAL------TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139
Query: 257 YYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
L LE L++ NNN+ + L L +L+ + L+ N + I F
Sbjct: 140 PPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGS---HL 196
Query: 317 LKEIRLSNN 325
L L N
Sbjct: 197 LPFAFLHGN 205
Score = 27.4 bits (59), Expect = 5.5
Identities = 27/160 (16%), Positives = 50/160 (31%), Gaps = 2/160 (1%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLG-TTILKGDQLQGIFNSKLRELEITGKDLKFID 60
L LS N L ++ATL T+L L L L+++ L+ +
Sbjct: 35 ILHLSENLLYTFSLATL-MPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNV 120
T + +++ + +L +L +
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 121 TKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFR 160
+ + T + L NL+TLLL+ N + + F
Sbjct: 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFG 193
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia
pestis [TaxId: 632]}
Length = 353
Score = 44.8 bits (104), Expect = 2e-05
Identities = 56/299 (18%), Positives = 105/299 (35%), Gaps = 20/299 (6%)
Query: 186 LLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEI 245
L +LE+L+ CN +T+L +L+ L + N L+ + + +
Sbjct: 56 LPPHLESLVASCNSLTELPELPQ----SLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLE 111
Query: 246 SFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIH 305
++ F I N N+L+ L +++ I + NL +
Sbjct: 112 KLPELQNSSFLKIIDVDN-NSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYAD 170
Query: 306 NNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNM 365
NN L + L E NL L TI NLLK++
Sbjct: 171 NNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALN 230
Query: 366 LNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN-----LN 420
+ + + F+++ + L + + LN SN + LN
Sbjct: 231 VRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELN 290
Query: 421 LSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
+SNN + L + ++ L S N + EVP +L++L++++N ++
Sbjct: 291 VSNNKLIELPALPPR-----LERLIASFNHLAEVP-----ELPQNLKQLHVEYNPLREF 339
Score = 43.7 bits (101), Expect = 4e-05
Identities = 40/297 (13%), Positives = 88/297 (29%), Gaps = 13/297 (4%)
Query: 260 LNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKE 319
L + LE L N++ + +L SL N +S + L + + E
Sbjct: 53 LPELPPHLESLVASCNSLTELPE-LPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLE 111
Query: 320 IRLSNNYLELIESDTFYNLK----ELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQI 375
++ N +L + + + L N+ + +
Sbjct: 112 KLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADN 171
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKK 435
+ + L + + + L +T+ NL + + E
Sbjct: 172 NSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNV 231
Query: 436 QAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSL 495
+ +L + + + L N + + LE L++
Sbjct: 232 RDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNV 291
Query: 496 EHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLP 552
+N + + P L+ + SFN ++ + L+ L++ +N LR P
Sbjct: 292 SNNKLIELPA----LPPRLERLIASFNHLAEVPEL----PQNLKQLHVEYNPLREFP 340
Score = 39.8 bits (91), Expect = 7e-04
Identities = 56/379 (14%), Positives = 114/379 (30%), Gaps = 76/379 (20%)
Query: 101 LDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFR 160
L+L++ LS L +L +LE+L+ CN +T+L
Sbjct: 43 LELNNLGLSSL-----------------------PELPPHLESLVASCNSLTEL------ 73
Query: 161 HLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITD-------LNGNLFRHLYN 213
+L +L++LL+ N + L +
Sbjct: 74 -----------------------PELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQL 110
Query: 214 LQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMD 273
+ L + I N + F +N+ +NL L + D
Sbjct: 111 EKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYAD 170
Query: 274 NNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESD 333
NN++K + + L + + N+ + L + L +
Sbjct: 171 NNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALN 230
Query: 334 TFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLD 393
N + F L+ + + N + P+L +L+
Sbjct: 231 VRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELN 290
Query: 394 LQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQE 453
+ +NKL + + + L S N++ + E + +K L + N ++E
Sbjct: 291 VSNNKLIELP-ALPPRLE------RLIASFNHLAEVPELPQN-----LKQLHVEYNPLRE 338
Query: 454 VPVNFLQTFADSLRKLYLD 472
P +S+ L ++
Sbjct: 339 FP-----DIPESVEDLRMN 352
Score = 39.0 bits (89), Expect = 0.001
Identities = 49/334 (14%), Positives = 97/334 (29%), Gaps = 43/334 (12%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDR 134
L++ N + LP + ++E +L S N L+ L
Sbjct: 43 LELNNLGLSSLP----ELPPHLE--SLVASCNSLTEL----------------------- 73
Query: 135 EKLLSNLETLLLRCNKITDLNG---NLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLE 191
+L +L++LL+ N + L+ L + K N + + ++L+
Sbjct: 74 PELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK 133
Query: 192 TLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFN 251
L + + + + +L F + NS L L I
Sbjct: 134 KLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNI 193
Query: 252 SNEFPYYILNKNL---NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNL 308
E P L L ++ L + ++ + +
Sbjct: 194 LEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSE 253
Query: 309 FHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNI 368
F+ L N L + +S N L + + +
Sbjct: 254 NIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELP----ALPPRLERL 309
Query: 369 VLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF 402
+ SFN + + NL +L ++ N L++F
Sbjct: 310 IASFNHLAEVPE----LPQNLKQLHVEYNPLREF 339
Score = 30.9 bits (68), Expect = 0.46
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 511 MPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+ L N S L LN+S+N+L LP +E+L S+N
Sbjct: 259 LSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPR---LERLIASFNH 315
Score = 27.5 bits (59), Expect = 4.7
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
+ L +++ L SLP +E L S N
Sbjct: 39 QAHELELNNLGLSSLPELPPH---LESLVASCNS 69
Score = 27.5 bits (59), Expect = 4.9
Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 53/116 (45%)
Query: 100 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLF 159
L++S+NKL L L LE L+ N + ++
Sbjct: 288 ELNVSNNKLIEL-----------------------PALPPRLERLIASFNHLAEV----- 319
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQ 215
+L NL+ L + N + + ++ + +L+
Sbjct: 320 ------------------------PELPQNLKQLHVEYNPLREF-PDIPESVEDLR 350
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 210
Score = 42.7 bits (99), Expect = 4e-05
Identities = 30/191 (15%), Positives = 70/191 (36%), Gaps = 13/191 (6%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNK 223
+K + D V+ E L++++ ++ + I + G ++L N+ +L L+ NK
Sbjct: 24 AETIKDNLKKKSVTDAVTQNE--LNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNK 79
Query: 224 LQIIELNSN-------VFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
L I+ +N D + L + + + ++N L L +
Sbjct: 80 LTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESL 139
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
+ + S + +++ +L+ + LS N++ + +
Sbjct: 140 YLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRA--LA 197
Query: 337 NLKELNTITLS 347
LK L+ + L
Sbjct: 198 GLKNLDVLELF 208
Score = 41.9 bits (97), Expect = 7e-05
Identities = 27/211 (12%), Positives = 68/211 (32%), Gaps = 19/211 (9%)
Query: 225 QIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYS 284
+ I + + + +F E + LN+++ + +N++IK+++
Sbjct: 6 ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQG-- 63
Query: 285 LYNLTSLNYINLEYNKIS----------KIHNNLFHFNIHKRLKEIRLSNNYLELIESDT 334
+ L ++ + L NK++ L + L +E +
Sbjct: 64 IQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNG 123
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN--AFVNLPNLVKL 392
++ L + +L + + + L + + + + L L L
Sbjct: 124 ISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNL 183
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSN 423
L N + D L + + + L L +
Sbjct: 184 YLSKNHISD--LRALAGLKNLDV---LELFS 209
Score = 35.4 bits (80), Expect = 0.010
Identities = 50/208 (24%), Positives = 73/208 (35%), Gaps = 21/208 (10%)
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
E L + T + LN++ I+ + + IK + LPN+ KL L
Sbjct: 22 AFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNG 77
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
NKL D NL N L EN K L + ++ +
Sbjct: 78 NKLTDIK-------------PLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGI 124
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQI 516
+ + + L K D T L L+ LSLE N I+ +V G+ LQ
Sbjct: 125 SDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQN 182
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNIS 544
+ LS N IS L L +L +
Sbjct: 183 LYLSKNHISDL--RALAGLKNLDVLELF 208
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor
receptor, N-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 38.6 bits (88), Expect = 5e-04
Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 2/125 (1%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
N E + +++++ L L L + + + + + F+ RL + LS
Sbjct: 32 NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP--DAFHFTPRLSRLNLSF 89
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N LE + T L + L S + + +++
Sbjct: 90 NALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLA 149
Query: 385 NLPNL 389
++PN
Sbjct: 150 HMPNA 154
Score = 31.3 bits (69), Expect = 0.16
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 482 TAFGNLDVLELLSLEHNN-IAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRI 540
+ L L +E+ + + R G+ L+ + + + + + + F+F+ +L
Sbjct: 25 HHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84
Query: 541 LNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
LN+S N L SL +++L +S N
Sbjct: 85 LNLSFNALESLSWKTVQGLSLQELVLSGNP 114
Score = 26.3 bits (56), Expect = 6.7
Identities = 9/92 (9%), Positives = 25/92 (27%), Gaps = 3/92 (3%)
Query: 341 LNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLK 400
+ + + + N + + ++++ L L L + + L+
Sbjct: 10 SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR 69
Query: 401 DFNLNVFSNITSKQTPMNLNLSNNYITNLYEN 432
+ F S N + +L
Sbjct: 70 FVAPDAFHFTPRLSRLNL---SFNALESLSWK 98
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 313
Score = 40.1 bits (92), Expect = 5e-04
Identities = 43/262 (16%), Positives = 72/262 (27%), Gaps = 9/262 (3%)
Query: 312 NIHKRLKEIRLSNNYLELIES--DTFYNLKELNTITLSYNLLKSIKTTSFKNLNNML-NI 368
R+ + LS L + NL LN + + L +
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 369 VLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITN 428
++ + P+ + LV LD N L S++ + N I+
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT---FDGNRISG 163
Query: 429 LYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLD 488
+ S+ +S NR+ TFA+ + DA+ D
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTG---KIPPTFANLNLAFVDLSRNMLEGDASVLFGSD 220
Query: 489 VLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRL 548
N NL +DL N I + L LN+S N L
Sbjct: 221 KNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280
Query: 549 RSLPRDVFSNTIIEKLDISYNQ 570
+ + + N+
Sbjct: 281 CGEIPQGGNLQRFDVSAYANNK 302
Score = 35.5 bits (80), Expect = 0.014
Identities = 33/252 (13%), Positives = 61/252 (24%), Gaps = 35/252 (13%)
Query: 202 DLNGNLFRHLYNLQELSLSFNKLQIIELNSN------VFDVFEKLQLLEISFSLFNSNEF 255
DL+G Y + + L + + + KL L + +
Sbjct: 56 DLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG 115
Query: 256 PYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKI----------- 304
+ TL L N + S+ +L +L I + N+IS
Sbjct: 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 175
Query: 305 -------HNNLFHFNIH---KRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSI 354
N L + + ++ + + +
Sbjct: 176 FTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235
Query: 355 KTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF--NLNVFSNITS 412
N+ + L N+I P L L L++ N L
Sbjct: 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDV 295
Query: 413 KQTPMNLNLSNN 424
+NN
Sbjct: 296 ------SAYANN 301
Score = 32.4 bits (72), Expect = 0.14
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Query: 335 FYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
K LN + L N + L + ++ +SFN + P NL
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAY 298
Query: 395 QDNKL 399
+NK
Sbjct: 299 ANNKC 303
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase
alpha-subunit, C-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 36.2 bits (83), Expect = 0.002
Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 9/111 (8%)
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
L+ + + L + LDL N+L+ + + L + L
Sbjct: 5 LAHKDLTVL--CHLEQLLLVTHLDLSHNRLRALPPALAAL-------RCLEVLQASDNAL 55
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLD 480
D ++ L L NNR+Q+ L L L N + +
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106
Score = 32.8 bits (74), Expect = 0.036
Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 11/116 (9%)
Query: 192 TLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFN 251
L L +T L L + L LS N+L + L+ LE+ +
Sbjct: 2 VLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRL------RALPPALAALRCLEVLQ--AS 51
Query: 252 SNEFPYYILNKNLNTLEWLAMDNNNIKNIRN-YSLYNLTSLNYINLEYNKISKIHN 306
N NL L+ L + NN ++ L + L +NL+ N + +
Sbjct: 52 DNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 107
Score = 31.6 bits (71), Expect = 0.082
Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 467 RKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISM 526
R L+L ++ L L ++ L L HN + + + L+++ S N +
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDNALEN 57
Query: 527 LTGEQFYFSFKLRILNISHNRLRSLP--RDVFSNTIIEKLDISYNQ 570
+ G + L + +NRL+ + + S + L++ N
Sbjct: 58 VDGVANLPRL--QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 101
Score = 31.6 bits (71), Expect = 0.096
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 8/121 (6%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
L+L++ +T L ++ + LDLS+NR++ A L ++
Sbjct: 3 LHLAHKDLTVLCHLEQLLL---VTHLDLSHNRLR----ALPPALAALRCLEVLQASDNAL 55
Query: 479 LDATAFGNLDVLELLSLEHNNIA-VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
+ NL L+ L L +N + + + P L +++L N + G Q +
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 538 L 538
L
Sbjct: 116 L 116
Score = 30.8 bits (69), Expect = 0.14
Identities = 19/127 (14%), Positives = 48/127 (37%), Gaps = 11/127 (8%)
Query: 270 LAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLEL 329
L + + ++ + + L L + +++L +N++ + L + L+ + +
Sbjct: 3 LHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV-- 58
Query: 330 IESDTFYNLKELNTITLSYNLLKSIKT-TSFKNLNNMLNIVLSFNQI---KYIYPNAFVN 385
D NL L + L N L+ + ++ + L N + + I
Sbjct: 59 ---DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 386 LPNLVKL 392
LP++ +
Sbjct: 116 LPSVSSI 122
Score = 30.5 bits (68), Expect = 0.22
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIA 501
+ L L++ + + L+ + L L N ++ L A L LE+L N +
Sbjct: 1 RVLHLAHKDLTVLC--HLEQLL-LVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALE 56
Query: 502 VVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF-KLRILNISHNRLRSLP 552
V +P LQ + L N + Q S +L +LN+ N L
Sbjct: 57 NV--DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106
Score = 27.4 bits (60), Expect = 2.2
Identities = 24/122 (19%), Positives = 39/122 (31%), Gaps = 5/122 (4%)
Query: 100 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLF 159
L L+H L+VL VT L L L+ L+ L L + L
Sbjct: 2 VLHLAHKDLTVLCHLEQLLLVTHL-DLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDRE-KLLSNLETLLLRCNKITDLNG---NLFRHLYNLQ 215
+ + NN + + + L L L+ N + G L L ++
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 120
Query: 216 EL 217
+
Sbjct: 121 SI 122
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes
[TaxId: 1639]}
Length = 227
Score = 37.3 bits (85), Expect = 0.003
Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 17/218 (7%)
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
L I + + + +L+ + + + I L NL+ L+L+D
Sbjct: 17 ALANAIKIAAGKSNVTDT--VTQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKD 72
Query: 397 N---------KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
N L S K L + +L +L
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
+ + + A YL + D T NL L L + N I+ +
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI--SP 190
Query: 508 FIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISH 545
+PNL + L N+IS ++ + L I+ +++
Sbjct: 191 LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
Score = 35.8 bits (81), Expect = 0.008
Identities = 38/260 (14%), Positives = 80/260 (30%), Gaps = 52/260 (20%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNK 223
+ +K +N D V+ + L + TL +T + G ++L NL L L N+
Sbjct: 19 ANAIKIAAGKSNVTDTVTQAD--LDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDNQ 74
Query: 224 LQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNY 283
+ + N L E + +
Sbjct: 75 ITDLAPLKN----------------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQ 118
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343
T L ++ ++ + LS ++ + NL +L T
Sbjct: 119 ITDV-TPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTT 177
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFN 403
+ N + I + +LPNL+++ L++N++ D
Sbjct: 178 LKADDNKISDI--------------------------SPLASLPNLIEVHLKNNQISD-- 209
Query: 404 LNVFSNITSKQTPMNLNLSN 423
++ +N ++ + L+N
Sbjct: 210 VSPLANTSNLFI---VTLTN 226
Score = 29.6 bits (65), Expect = 0.74
Identities = 33/234 (14%), Positives = 71/234 (30%), Gaps = 22/234 (9%)
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLY 286
I + + +F L + + +L+ + L+ + I +
Sbjct: 3 ITQPTAINVIFPDPALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEG--VQ 60
Query: 287 NLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTITL 346
L +L + L+ N+I+ + I + N + + L +T
Sbjct: 61 YLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT 120
Query: 347 SYNLLKSIK------------TTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
L + T LS + NL L L
Sbjct: 121 DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA 180
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSN 448
DNK+ D ++ +++ + ++L NN I+++ + + L+N
Sbjct: 181 DDNKISD--ISPLASLPNLIE---VHLKNNQISDVSPLANTSN---LFIVTLTN 226
Score = 29.6 bits (65), Expect = 0.87
Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 20/197 (10%)
Query: 138 LSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRC 197
L + TL +T + G ++L + + +N ++ + L E L
Sbjct: 40 LDGITTLSAFGTGVTTIEG--VQYLNN--LIGLELKDNQITDLAPLKNLTKITELELSGN 95
Query: 198 NKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPY 257
+ + L S + + SN+ ++ L + L Y
Sbjct: 96 PLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQY 155
Query: 258 ----------YILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNN 307
NL+ L L D+N I +I L +L +L ++L+ N+IS +
Sbjct: 156 LSIGNAQVSDLTPLANLSKLTTLKADDNKISDIS--PLASLPNLIEVHLKNNQISDVSP- 212
Query: 308 LFHFNIHKRLKEIRLSN 324
L + L+N
Sbjct: 213 ---LANTSNLFIVTLTN 226
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 37.3 bits (84), Expect = 0.005
Identities = 57/436 (13%), Positives = 129/436 (29%), Gaps = 27/436 (6%)
Query: 140 NLETLLLRCNKITDLNGN-LFRHLQKSIVKAKKNNNNNEDQVSDREKLL---SNLETLLL 195
++++L ++C +++D L LQ+ V + E + D L L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 196 RCNKITD-----LNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLF 250
R N++ D + L +Q+LSL L + L E+ S
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN 122
Query: 251 NSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFH 310
+ +L + L + + + + K + NN +
Sbjct: 123 LLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 182
Query: 311 FNIHKRLKEIRLSNNYLELIESDTFYNLKELN-TITLSYNLLKSIKTTSFKNLNNMLNIV 369
+ L + + + N K+ N + ++
Sbjct: 183 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 242
Query: 370 LSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNL 429
++ ++P++ + + + + D + + + K+ + N + L
Sbjct: 243 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARL 302
Query: 430 YENDKKQAPIYIKSLDLSNNRIQEVPV--------NFLQTFADSLRKLYLDFNEIKHLDA 481
+ ++SL + + + L+ ++ L
Sbjct: 303 LCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 362
Query: 482 TAFGNLDVLELLSLEHNNI----AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
VL +L L ++ + T + +L+ +DLS N + Q S +
Sbjct: 363 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVR 422
Query: 538 -----LRILNISHNRL 548
L L +
Sbjct: 423 QPGCLLEQLVLYDIYW 438
Score = 36.1 bits (81), Expect = 0.010
Identities = 49/428 (11%), Positives = 114/428 (26%), Gaps = 28/428 (6%)
Query: 171 KNNNNNEDQVSDREKLLSNLETLLLRCNKITDLN----GNLFRHLYNLQELSLSFNKLQ- 225
+ ++ + ++ LL + + L +T+ + R L EL+L N+L
Sbjct: 10 QCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGD 69
Query: 226 --IIELNSNVFDVFEKLQLLEIS-------FSLFNSNEFPYYILNKNLNTLEWLAMDNNN 276
+ + + K+Q L + S+ + L+ + L D
Sbjct: 70 VGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGL 129
Query: 277 IKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFY 336
+ + L K + +N
Sbjct: 130 QLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVL 189
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
++ L + N ++ IV S ++ + + +
Sbjct: 190 CQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPG 249
Query: 397 NKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPV 456
L T + + + + + +
Sbjct: 250 LLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLE 309
Query: 457 NFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGM----P 512
Q + ++ H + N +LEL + V+ G+
Sbjct: 310 PGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGS 369
Query: 513 NLQIIDLSFNEISMLTGEQFYFSFK----LRILNISHNRL-----RSLPRDVFSN-TIIE 562
L+++ L+ ++S + + LR L++S+N L L V ++E
Sbjct: 370 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 429
Query: 563 KLDISYNQ 570
+L +
Sbjct: 430 QLVLYDIY 437
Score = 35.3 bits (79), Expect = 0.018
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 5/99 (5%)
Query: 376 KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSN-ITSKQTPMNLNLSNNYITN----LY 430
+ + L L L D + D + + + + + + L+LSNN + +
Sbjct: 358 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL 417
Query: 431 ENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKL 469
+Q ++ L L + E + LQ L
Sbjct: 418 VESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSL 456
Score = 34.2 bits (76), Expect = 0.048
Identities = 8/64 (12%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 513 NLQIIDLSFNEISMLTGEQFYFSFK-LRILNISHNRL-----RSLPRDVFSNTIIEKLDI 566
++Q +D+ E+S + + +++ + L + + + N + +L++
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 567 SYNQ 570
N+
Sbjct: 63 RSNE 66
Score = 32.3 bits (71), Expect = 0.18
Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 6/75 (8%)
Query: 359 FKNLNNMLNIVLSFNQIKYIY----PNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQ 414
+ + + + L+ + + +L +LDL +N L D + +
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 415 TPM--NLNLSNNYIT 427
+ L L + Y +
Sbjct: 425 GCLLEQLVLYDIYWS 439
Score = 31.5 bits (69), Expect = 0.29
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 188 SNLETLLLRCNKITDLN----GNLFRHLYNLQELSLSFNKLQ---IIELNSNVFDVFEKL 240
S L L L ++D + ++L+EL LS N L I++L +V L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 241 QLLEISFSLFN 251
+ L + ++
Sbjct: 429 EQLVLYDIYWS 439
Score = 30.3 bits (66), Expect = 0.67
Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 11/90 (12%)
Query: 262 KNLNTLEWLAMDNNNIKNIRN----YSLYNLTSLNYINLEYNKIS-----KIHNNLFHFN 312
+ + L L + + ++ + +L SL ++L N + ++ ++
Sbjct: 366 QPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPG 425
Query: 313 IHKRLKEIRLSNNYLELIESDTFYNLKELN 342
L+++ L + Y D L++
Sbjct: 426 --CLLEQLVLYDIYWSEEMEDRLQALEKDK 453
Score = 27.6 bits (59), Expect = 4.2
Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 41/128 (32%)
Query: 100 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLF 159
L L+ +S + ++L + + +L L L N + D
Sbjct: 373 VLWLADCDVSDSSCSSLAATLLANH---------------SLRELDLSNNCLGDAGI--- 414
Query: 160 RHLQKSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSL 219
+V++ + LE L+L ++ + LQ L
Sbjct: 415 ----LQLVESVRQPG-------------CLLEQLVLYDIYWSEEMEDR------LQALEK 451
Query: 220 SFNKLQII 227
L++I
Sbjct: 452 DKPSLRVI 459
Score = 27.2 bits (58), Expect = 6.6
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 9/70 (12%)
Query: 465 SLRKLYLDFNEIKHLD----ATAFGNLDVLELLSLEHNNI-----AVVVKRTFIGMPNLQ 515
LR L+L ++ A L L L +N + +V+ L+
Sbjct: 370 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 429
Query: 516 IIDLSFNEIS 525
+ L S
Sbjct: 430 QLVLYDIYWS 439
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 344
Score = 36.8 bits (83), Expect = 0.006
Identities = 41/310 (13%), Positives = 86/310 (27%), Gaps = 25/310 (8%)
Query: 267 LEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLF--HFNIHKRLKEIRLSN 324
L+ A+ + K++ L S+ I L N I + K L+ S+
Sbjct: 10 LKLDAITTEDEKSVFA-VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD 68
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
+ ++ + L+ L L L +++ + ++ F + ++
Sbjct: 69 IFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYL 128
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSL 444
+ L L V + ++ N + N + + + L
Sbjct: 129 HNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188
Query: 445 DLSNNRIQEVPVNFLQTFADSL-----------RKLYLDFNEIKHLDATAFGNLDVLELL 493
+ ++ + + A A + L L
Sbjct: 189 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 248
Query: 494 SLEHNNI------AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSF-----KLRILN 542
L + AVV + + LQ + L +NEI + L L
Sbjct: 249 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLE 308
Query: 543 ISHNRLRSLP 552
++ NR
Sbjct: 309 LNGNRFSEED 318
Score = 29.8 bits (65), Expect = 0.95
Identities = 40/338 (11%), Positives = 91/338 (26%), Gaps = 35/338 (10%)
Query: 75 LKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKDR 134
IT + + + L E+ + LS N + L +
Sbjct: 13 DAITTEDEKSVFAVLL---EDDSVKEIVLSGNTIGTE---------------AARWLSEN 54
Query: 135 EKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKKNNNNNEDQVSDREKL-LSNLETL 193
+LE + + L+ + K + ++SD + +
Sbjct: 55 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLI 114
Query: 194 LLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSN 253
+ L + Q + LQ + +N + ++ L N +
Sbjct: 115 DFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGS 174
Query: 254 EFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNI 313
+ ++ L + M N I+ L L+ + +
Sbjct: 175 MKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSA 234
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFN 373
+ + L L L + ++ + L L +N
Sbjct: 235 LAIALKSWPNLRELGL-----NDCLLSARGAAAVVDAFSKLENIGLQTLR------LQYN 283
Query: 374 QI-----KYIYPNAFVNLPNLVKLDLQDNKLKDFNLNV 406
+I + + +P+L+ L+L N+ + + V
Sbjct: 284 EIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVV 321
Score = 29.1 bits (63), Expect = 1.4
Identities = 46/321 (14%), Positives = 89/321 (27%), Gaps = 33/321 (10%)
Query: 168 KAKKNNNNNEDQVSDREKLL---SNLETLLLRCNKITDLN----GNLFRHLYNLQELSLS 220
K+ K + + +L +++ ++L N I +L+ S
Sbjct: 8 KSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 221 FNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNI 280
++ LL+ + E L + +
Sbjct: 68 DIFTGRVKDEIPEALRL----LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPL 123
Query: 281 RNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLE----LIESDTFY 336
+ L+N + + + L+ I N LE + TF
Sbjct: 124 EHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 183
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI---------YPNAFVNLP 387
+ + L+T+ + N ++ L ++ A + P
Sbjct: 184 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 243
Query: 388 NLVKLDLQDNKLKDFNLNVFSNITSKQTPMN---LNLSNNYITN-----LYENDKKQAPI 439
NL +L L D L + SK + L L N I L ++ P
Sbjct: 244 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMP- 302
Query: 440 YIKSLDLSNNRIQEVPVNFLQ 460
+ L+L+ NR E +
Sbjct: 303 DLLFLELNGNRFSEEDDVVDE 323
Score = 28.3 bits (61), Expect = 3.0
Identities = 5/34 (14%), Positives = 17/34 (50%)
Query: 537 KLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
L++ I+ +S+ + + ++++ +S N
Sbjct: 9 SLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNT 42
Score = 27.5 bits (59), Expect = 5.3
Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 8/94 (8%)
Query: 465 SLRKLYLDFNEIKHLDATAF----GNLDVLELLSLEHNNI----AVVVKRTFIGMPNLQI 516
S+ L + I D + D ++ + L N I A + +L+I
Sbjct: 4 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEI 63
Query: 517 IDLSFNEISMLTGEQFYFSFKLRILNISHNRLRS 550
+ S + E L + +L +
Sbjct: 64 AEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHT 97
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 192
Score = 35.9 bits (81), Expect = 0.006
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 312 NIHKRLKEIRLSNN-YLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVL 370
+I E+ L++N + F L L + L N L I+ +F+ +++ + L
Sbjct: 26 DIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85
Query: 371 SFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLY 430
N+IK I F+ L L L+L DN++ F ++ S + + N +L
Sbjct: 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA 145
Score = 35.2 bits (79), Expect = 0.011
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 442 KSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIK-HLDATAFGNLDVLELLSLEHNNI 500
++D + ++E+P + +L L+ NE+ FG L L L L+ N +
Sbjct: 11 TTVDCTGRGLKEIPRDIPL----HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQL 66
Query: 501 AVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSN 558
+ F G ++Q + L N+I ++ + F +L+ LN+ N++ + F +
Sbjct: 67 TGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEH 124
Score = 32.1 bits (71), Expect = 0.12
Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 33/177 (18%)
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDF----- 473
++ + + + + P++ L L++N + + + L L KL L
Sbjct: 13 VDCTGRGLKEIPRD----IPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG 68
Query: 474 -------------------NEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNL 514
N+IK + F L L+ L+L N I+ V+ +F + +L
Sbjct: 69 IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSL 128
Query: 515 QIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLR-SLPRDVFSNTIIEKLDISYNQ 570
++ + +F+ LR +++ R P V I D+ +++
Sbjct: 129 TSLN-LASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQI---KDLPHSE 181
Score = 30.9 bits (68), Expect = 0.29
Identities = 33/154 (21%), Positives = 62/154 (40%), Gaps = 3/154 (1%)
Query: 265 NTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSN 324
+T E L DN + + L L + L+ N+++ I N F H + E++L
Sbjct: 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQ--ELQLGE 87
Query: 325 NYLELIESDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFV 384
N ++ I + F L +L T+ L N + + SF++LN+ L + + +
Sbjct: 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS-LTSLNLASNPFNCNCHLAW 146
Query: 385 NLPNLVKLDLQDNKLKDFNLNVFSNITSKQTPMN 418
L K L + + ++ K P +
Sbjct: 147 FAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHS 180
Score = 27.1 bits (58), Expect = 5.1
Identities = 7/32 (21%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 539 RILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
++ + L+ +PRD+ +T +L ++ N+
Sbjct: 11 TTVDCTGRGLKEIPRDIPLHT--TELLLNDNE 40
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 34.1 bits (77), Expect = 0.019
Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 4/110 (3%)
Query: 438 PIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEH 497
+ + LDL +I + L D + NEI+ LD F L L+ L + +
Sbjct: 17 AVRDRELDLRGYKIPVIE--NLGATLDQFDAIDFSDNEIRKLD--GFPLLRRLKTLLVNN 72
Query: 498 NNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLRILNISHNR 547
N I + + +P+L + L+ N + L S K
Sbjct: 73 NRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 122
Score = 34.1 bits (77), Expect = 0.020
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 187 LSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSN 232
L LR KI + NL L + S N+++ ++
Sbjct: 17 AVRDRELDLRGYKIPVIE-NLGATLDQFDAIDFSDNEIRKLDGFPL 61
Score = 33.4 bits (75), Expect = 0.034
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343
N ++L KI I N + I S+N + ++ L+ L T
Sbjct: 13 QYTNAVRDRELDLRGYKIPVIENLGATL---DQFDAIDFSDNEIRKLDGFP--LLRRLKT 67
Query: 344 ITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYI 378
+ ++ N + I + L ++ ++L+ N + +
Sbjct: 68 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVEL 102
Score = 31.8 bits (71), Expect = 0.13
Identities = 8/52 (15%), Positives = 21/52 (40%)
Query: 531 QFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQDKIRPGRESNPR 582
Q+ + + R L++ ++ + + + +D S N+ + G R
Sbjct: 13 QYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRR 64
Score = 30.7 bits (68), Expect = 0.24
Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 480 DATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFKLR 539
A + N L L I V+ + + ID S NEI L G K
Sbjct: 10 QAAQYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTL 68
Query: 540 ILNISHN 546
++N +
Sbjct: 69 LVNNNRI 75
Score = 28.8 bits (63), Expect = 1.0
Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 208 FRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTL 267
+ + +EL L K+ +IE N+ ++ ++ S NE L L
Sbjct: 14 YTNAVRDRELDLRGYKIPVIE---NLGATLDQFDAIDFSD-----NEIRKLDGFPLLRRL 65
Query: 268 EWLAMDNNNIKNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKR 316
+ L ++NN I I L L + L N + ++ + ++
Sbjct: 66 KTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSL 114
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 199
Score = 33.9 bits (76), Expect = 0.033
Identities = 35/196 (17%), Positives = 64/196 (32%), Gaps = 12/196 (6%)
Query: 227 IELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYS-L 285
I ++ + +F L E ++ + +L+ + L D IK+I L
Sbjct: 2 ITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYL 61
Query: 286 YNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNTIT 345
NLT +N+ N + I+ + N +I +I L T
Sbjct: 62 NNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDI 121
Query: 346 LSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPN---------AFVNLPNLVKLDLQD 396
L ++ + LS NL L +LD+
Sbjct: 122 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISS 181
Query: 397 NKLKDFNLNVFSNITS 412
NK+ D ++V + +T+
Sbjct: 182 NKVSD--ISVLAKLTN 195
Score = 33.5 bits (75), Expect = 0.043
Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 23/201 (11%)
Query: 164 KSIVKAKKNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNK 223
+K N D VS + L + TL I ++G +L NL +++ S N+
Sbjct: 18 AEKMKTVLGKTNVTDTVSQTD--LDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQ 73
Query: 224 LQIIELNSNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNY 283
L I N+ + + L N+ L N +N
Sbjct: 74 LTDITPLKNLTKLVDILM--------NNNQIADITPLANLTNLTGLTLFNNQITDIDPLK 125
Query: 284 SLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELNT 343
+L NL L + + IS + ++ + ++ + NL L
Sbjct: 126 NLTNLNRLELSSNTISDISALSGLTSLQQLN---------FSSNQVTDLKPLANLTTLER 176
Query: 344 ITLSYNLLKSIKTTSFKNLNN 364
+ +S N + I + L N
Sbjct: 177 LDISSNKVSDI--SVLAKLTN 195
Score = 28.9 bits (63), Expect = 1.2
Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 15/188 (7%)
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQD 396
L E L + + + +L+ + + IK I + L NL +++ +
Sbjct: 16 ALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSN 71
Query: 397 N---------KLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLS 447
N L + +N NL+N L+ N +L+
Sbjct: 72 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 131
Query: 448 NNRIQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT 507
+ ++ + + L+F+ + D NL LE L + N ++ +
Sbjct: 132 RLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDI--SV 189
Query: 508 FIGMPNLQ 515
+ NL+
Sbjct: 190 LAKLTNLE 197
Score = 26.9 bits (58), Expect = 5.8
Identities = 21/176 (11%), Positives = 49/176 (27%), Gaps = 9/176 (5%)
Query: 360 KNLNNMLNIVLSFNQIKYIYPNAFVNLPNLVKLDLQDNKLKDF-NLNVFSNITSKQTPMN 418
L + VL + +L + L +K + +N+T N
Sbjct: 15 TALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNN 72
Query: 419 LNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKH 478
+ NL + + + + L + + +
Sbjct: 73 QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 132
Query: 479 LDATAFGNLDVLELLSLEHNNIAVVVKRTFIG------MPNLQIIDLSFNEISMLT 528
L+ ++ D+ L L + L+ +D+S N++S ++
Sbjct: 133 LELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDIS 188
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 33.5 bits (75), Expect = 0.049
Identities = 36/235 (15%), Positives = 74/235 (31%), Gaps = 6/235 (2%)
Query: 121 TKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAK--KNNNNNED 178
L G + D L + + RC + + ++ L H V+ N+
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQGVIAFRCPR-SFMDQPLAEHFSPFRVQHMDLSNSVIEVS 61
Query: 179 QVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFE 238
+ S L+ L L +++D N NL L+LS +
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 239 KLQLLEISFSLFNSNEFPYYIL--NKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINL 296
+L L +S+ + + + T L+ N++ +L
Sbjct: 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 181
Query: 297 EYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIES-DTFYNLKELNTITLSYNL 350
+ + ++ F L+ + LS Y + E+ + L T+ + +
Sbjct: 182 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIV 236
Score = 32.8 bits (73), Expect = 0.092
Identities = 39/254 (15%), Positives = 78/254 (30%), Gaps = 7/254 (2%)
Query: 278 KNIRNYSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIE-SDTFY 336
KN+ L S I + S + L R++ + LSN+ +E+
Sbjct: 10 KNLHPDVTGRLLSQGVIAFRCPR-SFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILS 68
Query: 337 NLKELNTITLSYNLLKSIKTTSFKNLNNM--LNIVLSFNQIKYIYPNAFVNLPNLVKLDL 394
+L ++L L + +N+ LN+ ++ + L +L+L
Sbjct: 69 QCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNL 128
Query: 395 QDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEV 454
+ +T LNLS + + L + +
Sbjct: 129 SWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML 188
Query: 455 PVNFLQTFADSLRKLYLDFNEIKHLDAT---AFGNLDVLELLSLEHNNIAVVVKRTFIGM 511
+ Q F +L + + G + L+ L + ++ +
Sbjct: 189 KNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEAL 248
Query: 512 PNLQIIDLSFNEIS 525
P+LQI F I+
Sbjct: 249 PHLQINCSHFTTIA 262
Score = 32.0 bits (71), Expect = 0.15
Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Query: 391 KLDLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNR 450
LDL L +V + S+ + +++ + +P ++ +DLSN+
Sbjct: 4 TLDLTGKNLHP---DVTGRLLSQGV-IAFRCPRSFMDQP--LAEHFSPFRVQHMDLSNSV 57
Query: 451 IQEVPVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNN 499
I+ ++ + + L+ L L+ + L L+L +
Sbjct: 58 IEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 106
Score = 29.3 bits (64), Expect = 1.1
Identities = 27/230 (11%), Positives = 64/230 (27%), Gaps = 11/230 (4%)
Query: 2 TLDLSHNKLSVLNMATLYSNVTKLQHLGTTILKGDQLQGIFNSKLRELEITGKDLKFIDP 61
TLDL+ L L S + + + +++ ++++ ++
Sbjct: 4 TLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTL 63
Query: 62 SAF----DNIDACYDLTLKITNTQIEELPSG------LFDKIENIEQMTLDLSHNKLSVL 111
+ L++++ + L + L + S L
Sbjct: 64 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123
Query: 112 NMATLYSNVTKLQHLGTTILKDREKLLSNLETLLLRCNKITDLNGNLFRHLQKSIVKAKK 171
+ L + + + ++ L R N L R +
Sbjct: 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 183
Query: 172 NNNNNEDQVSDREKLLSNLETL-LLRCNKITDLNGNLFRHLYNLQELSLS 220
++ ++ L+ L+ L L RC I + L+ L +
Sbjct: 184 DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVF 233
Score = 27.4 bits (59), Expect = 5.6
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 515 QIIDLSFNEISMLTGEQFYFSFKLRILNISHNRLRSLPRDVFSNTIIEKLDISYNQ 570
Q +DL+ + + S + + + + FS ++ +D+S +
Sbjct: 3 QTLDLTGKNLHPDVTGRL-LSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSV 57
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 31.7 bits (71), Expect = 0.11
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 393 DLQDNKLKDFNLNVFSNITSKQTPMNLNLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQ 452
D L L ++ ++ + LN ++ L ++ + SL+LSNNR+
Sbjct: 21 DGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATL--RIIEENIPELLSLNLSNNRLY 78
Query: 453 EV-PVNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRT---- 507
+ ++ + A +L+ L L NE+K LE L L+ N+++ +
Sbjct: 79 RLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYI 138
Query: 508 ---FIGMPNLQIID 518
P L +D
Sbjct: 139 SAIRERFPKLLRLD 152
Score = 31.7 bits (71), Expect = 0.14
Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 16/140 (11%)
Query: 267 LEWLAMDNNNIKNIRN-YSLYNLTSLNYINLEYNKISKIHNNLFHFNIHKRLKEIRLSNN 325
A+D +++ + + LN + + I N+ L + LSNN
Sbjct: 22 GSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEENI------PELLSLNLSNN 75
Query: 326 YLELIE--SDTFYNLKELNTITLSYNLLKSIKTTSFKNLNNMLNIVLSFNQIKYIYPNA- 382
L ++ S L + LS N LKS + + + L N + + +
Sbjct: 76 RLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQS 135
Query: 383 ------FVNLPNLVKLDLQD 396
P L++LD +
Sbjct: 136 TYISAIRERFPKLLRLDGHE 155
Score = 31.3 bits (70), Expect = 0.17
Identities = 30/140 (21%), Positives = 48/140 (34%), Gaps = 8/140 (5%)
Query: 420 NLSNNYITNLYENDKKQAPIYIKSLDLSNNRIQEVPVNFLQTFADSLRKLYLDFNEIKHL 479
L + L K+ ++LDL R V + L + L
Sbjct: 3 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQ-----NIDVVLNRRSSMAATL 57
Query: 480 DATAFGNLDVLELLSLEHNNIAVV--VKRTFIGMPNLQIIDLSFNEISMLTGEQFYFSFK 537
N+ L L+L +N + + + PNL+I++LS NE+ K
Sbjct: 58 R-IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLK 116
Query: 538 LRILNISHNRLRSLPRDVFS 557
L L + N L RD +
Sbjct: 117 LEELWLDGNSLSDTFRDQST 136
Score = 27.9 bits (61), Expect = 2.2
Identities = 16/141 (11%), Positives = 41/141 (29%), Gaps = 6/141 (4%)
Query: 171 KNNNNNEDQVSDREKLLSNLETLLLRCNKITDLNGNLFRHLYNLQELSLSFNKLQIIELN 230
+ +Q+ + L + L+ + +
Sbjct: 3 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPD--LVAQNIDVVLNRRSSMAATLR-- 58
Query: 231 SNVFDVFEKLQLLEISFSLFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTS 290
+ + +L L +S + + I+ + L+ L + N +K+ R
Sbjct: 59 -IIEENIPELLSLNLSNNRLYRLDDMSSIV-QKAPNLKILNLSGNELKSERELDKIKGLK 116
Query: 291 LNYINLEYNKISKIHNNLFHF 311
L + L+ N +S + +
Sbjct: 117 LEELWLDGNSLSDTFRDQSTY 137
Score = 26.7 bits (58), Expect = 5.0
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 314 HKRLKEIRLSNNYLELIESDTFYNLKELNTITLSYNLLKSIK--TTSFKNLNNMLNIVLS 371
+ ++ + N+ EL ++ LS N L + ++ + N+ + LS
Sbjct: 41 QNIDVVLNRRSSMAATLRI-IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLS 99
Query: 372 FNQIKYIYPNAFVNLPNLVKLDLQDNKLKDFNLNVFSNITS 412
N++K + L +L L N L D + + I++
Sbjct: 100 GNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase
fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Length = 198
Score = 29.5 bits (66), Expect = 0.82
Identities = 10/70 (14%), Positives = 29/70 (41%)
Query: 61 PSAFDNIDACYDLTLKITNTQIEELPSGLFDKIENIEQMTLDLSHNKLSVLNMATLYSNV 120
P + + +K+T ++E L L ++ + ++ L + +S ++ L
Sbjct: 99 PYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQ 158
Query: 121 TKLQHLGTTI 130
T++ + +
Sbjct: 159 TRMPMVQKKV 168
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 198
Score = 28.5 bits (62), Expect = 1.8
Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 15/165 (9%)
Query: 187 LSNLETLLLRCN--KITDLNGNLFRHLYNLQELSLSFNKLQIIELNSNVFDVFEKLQLLE 244
+ E + L I ++ L L + L+LS N ++ I E L++L
Sbjct: 22 ATEAEKVELHGMIPPIEKMDATL-STLKACKHLALSTNNIEKIS----SLSGMENLRILS 76
Query: 245 ISFS-------LFNSNEFPYYILNKNLNTLEWLAMDNNNIKNIRNYSLYNLTSLNYINLE 297
+ + L + + ++ + S +T+ I+
Sbjct: 77 LGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKL 136
Query: 298 YNKISKIHNNLFHFNIHKRLKEIRLSNNYLELIESDTFYNLKELN 342
L ++ KE ++ Y + NLK+L+
Sbjct: 137 AALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK-RLPNLKKLD 180
>d1f3va_ d.58.22.1 (A:) TRADD, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 158
Score = 26.3 bits (58), Expect = 6.6
Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 456 VNFLQTFADSLRKLYLDFNEIKHLDATAFGNLDVLELLSLEHNNIAVVVKRTFIGMPNLQ 515
V +A +K+ + + ++ A + G+ DVL++L + ++ ++V+ F G
Sbjct: 19 VVLSDAYAHPQQKVAV-YRALQAALAESGGSPDVLQMLKIHRSDPQLIVQLRFCGRQPCG 77
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.136 0.376
Gapped
Lambda K H
0.267 0.0622 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,034,005
Number of extensions: 98005
Number of successful extensions: 878
Number of sequences better than 10.0: 1
Number of HSP's gapped: 418
Number of HSP's successfully gapped: 170
Length of query: 584
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 494
Effective length of database: 1,171,896
Effective search space: 578916624
Effective search space used: 578916624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.2 bits)