BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11649
(890 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242016394|ref|XP_002428806.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212513503|gb|EEB16068.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 330
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 156/243 (64%), Gaps = 13/243 (5%)
Query: 29 IDIQSQ---ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDIC 85
+DIQ+ ER+L+++G+KS GKST++ RFL++N+ K TLA+EY + RKSG+++ KDIC
Sbjct: 27 LDIQNTNIGERSLIIVGSKSSGKSTMIQRFLDQNEPVKKTLAMEYNFGRKSGRSLAKDIC 86
Query: 86 HLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFES 145
H+WELG T+ + + +++ L TLVL+LDLS ++W ET L I +
Sbjct: 87 HVWELGGETTFVNLLNVY----LGLNKNTTLVLVLDLSTPETMWNALETILQTSYNILKK 142
Query: 146 NESVREKRGSFEHF--RTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
+E +FE+ + + H D I FP+PL+++GGKYDLFE+ EP KK++ + L
Sbjct: 143 ----KEITDTFENCGNKIDESHEDFEYINPFPIPLVIVGGKYDLFESFEPEKKKLICRTL 198
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R +AH GASLLF+S D LVK+ +DI +H+ F+ + DYNKP+ +P+G DS +
Sbjct: 199 RQVAHSQGASLLFYSDKDSNLVKKLKDIFHHHGFNGSQWKGCSMDYNKPLLIPYGADSYS 258
Query: 264 SIE 266
++
Sbjct: 259 QLD 261
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 132/252 (52%), Gaps = 38/252 (15%)
Query: 388 VTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKF 447
+ DICH+WELG T+ + + +++ L TLVL+LDLS ++W ET L
Sbjct: 81 LAKDICHVWELGGETTFVNLLNVY----LGLNKNTTLVLVLDLSTPETMWNALETILQTS 136
Query: 448 RAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYD-LFEDKGLIRTFP 506
I + +E +FE+ G K D ED I FP
Sbjct: 137 YNILKK----KEITDTFEN----------------------CGNKIDESHEDFEYINPFP 170
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
+PL+++GGKYDLFE+ EP KK++ + LR +AH GASLLF+S D LVK+ +DI +H+
Sbjct: 171 IPLVIVGGKYDLFESFEPEKKKLICRTLRQVAHSQGASLLFYSDKDSNLVKKLKDIFHHH 230
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTE---VGR-KHL-TTKYSSN 621
F+ + DYNKP+ +P+G DS + ++ + + + + + R KH+ TTK+
Sbjct: 231 GFNGSQWKGCSMDYNKPLLIPYGADSYSQLDVNVKTLHSSNQGIIIERFKHIFTTKFPQT 290
Query: 622 SALGLMN--DNP 631
S L N D+P
Sbjct: 291 SELETFNISDDP 302
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
ED I FP+PL+++GGKYDLFE+ EP KK++ + LR +AH GASLLF+S D LV
Sbjct: 161 EDFEYINPFPIPLVIVGGKYDLFESFEPEKKKLICRTLRQVAHSQGASLLFYSDKDSNLV 220
Query: 770 KRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTS-SLDKYK 828
K+ +DI +H+ F+ + DYNKP+ +P+G DS + ++ + + + + ++++K
Sbjct: 221 KKLKDIFHHHGFNGSQWKGCSMDYNKPLLIPYGADSYSQLDVNVKTLHSSNQGIIIERFK 280
Query: 829 HIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLE 871
HIFTT F Q + + S DP+ + N+ EP ID LR QK E
Sbjct: 281 HIFTTKFPQTSELETFNIS-DDPSKNPNFKEPAIDILRAQKDE 322
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+ EP KK++ + LR +AH GASLLF+S D LVK+ +DI +H+ F+ + D
Sbjct: 184 ESFEPEKKKLICRTLRQVAHSQGASLLFYSDKDSNLVKKLKDIFHHHGFNGSQWKGCSMD 243
Query: 365 YNKPIFVPFGTDSVASIE 382
YNKP+ +P+G DS + ++
Sbjct: 244 YNKPLLIPYGADSYSQLD 261
>gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis]
gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis]
Length = 366
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 160/278 (57%), Gaps = 25/278 (8%)
Query: 4 KSLKDIAIE-----LAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEK 58
K++ D+AIE L K S H +E + LIG+K+ GK+++V RFL++
Sbjct: 8 KTIWDLAIEERDYLLNEAKKKGTQESSPH-----GEEAGIFLIGSKNAGKTSMVLRFLDR 62
Query: 59 NDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLV 117
++ PKPT AL+Y + RK+ G + KD+ H+WELG GT ++ + ++ + G +++
Sbjct: 63 DEVPKPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDI--PINVDSVRGLSII 120
Query: 118 LMLDLSRLNSLWTEAETFLAKFRA--------IFESNESVREK--RGSFEHFRTADEHRD 167
+ LDLS N LW ET L + + + N S +K ++E F T +H D
Sbjct: 121 IFLDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGT--DHPD 178
Query: 168 KGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKR 227
K + FP+PL ++GGKYD++++ +P K+++ + LR++AH NGA L F S+ GLV R
Sbjct: 179 KSFVEPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGR 238
Query: 228 TRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
+R ++ H F + L A+ D+NKPI V G DS+A I
Sbjct: 239 SRGMIGHLLFHTSLGKAIGVDHNKPIIVSAGQDSLAQI 276
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 6/183 (3%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
DK + FP+PL ++GGKYD++++ +P K+++ + LR++AH NGA L F S+ GLV
Sbjct: 178 DKSFVEPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVG 237
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE----GTTQYVTAGSTSSLDK 826
R+R ++ H F + L A+ D+NKPI V G DS+A I + S + D
Sbjct: 238 RSRGMIGHLLFHTSLGKAIGVDHNKPIIVSAGQDSLAQIGAPPVASEDLGRLQSRNPYDL 297
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKY 886
+K + T F + Q+ + DP+ D Y E +D++R QK E+LD+ RR+ + K +
Sbjct: 298 WKAAYATFFPPEKSKQHSDRE--DPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKARE 355
Query: 887 RTR 889
+R
Sbjct: 356 MSR 358
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 37/219 (16%)
Query: 388 VTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKF 447
+ D+ H+WELG GT ++ + ++ + G ++++ LDLS N LW ET L +
Sbjct: 85 IAKDVGHIWELGGGTFLSKLIDI--PINVDSVRGLSIIIFLDLSLPNELWHTMETLLNQV 142
Query: 448 RA--------IFESNESVREK--RGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
+ + N S +K ++E F T +H DK + FP+PL ++GGKYD+++
Sbjct: 143 KKRVHKVMDELAAKNPSAVQKLRNDAWEKFGT--DHPDKSFVEPFPIPLAIVGGKYDIYQ 200
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
D +P K+++ + LR++AH NGA L F S+ GLV
Sbjct: 201 D-----------------------FDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVG 237
Query: 558 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
R+R ++ H F + L A+ D+NKPI V G DS+A I
Sbjct: 238 RSRGMIGHLLFHTSLGKAIGVDHNKPIIVSAGQDSLAQI 276
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K+++ + LR++AH NGA L F S+ GLV R+R ++ H F + L A+ D
Sbjct: 200 QDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSRGMIGHLLFHTSLGKAIGVD 259
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
+NKPI V G DS+A I G + D+ L
Sbjct: 260 HNKPIIVSAGQDSLAQI-GAPPVASEDLGRL 289
>gi|260803982|ref|XP_002596868.1| hypothetical protein BRAFLDRAFT_269217 [Branchiostoma floridae]
gi|229282128|gb|EEN52880.1| hypothetical protein BRAFLDRAFT_269217 [Branchiostoma floridae]
Length = 376
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 166/280 (59%), Gaps = 27/280 (9%)
Query: 2 GPKSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDT 61
G S+ D+AIE H H E + + ++E ++LL+G+KS GK++++ RFL++++
Sbjct: 20 GVDSIWDLAIETVH--HQEKDGKEGQQENRPAEESSVLLMGSKSSGKTSIILRFLDRDEA 77
Query: 62 PKPTLALEYIYARKSGKTVMKDICHLWELGSGT--SRLEVASLFSSFSLTAQSGFTLVLM 119
KPT ALE+ + R++ + KD+ ++WELG GT SRL + ++ ++ + ++L+
Sbjct: 78 AKPTTALEFTFGRRARNNLAKDVVNIWELGGGTFLSRL----VDTAINVNSVRQLAVMLV 133
Query: 120 LDLSRLNSLWTEAETFLAKFRAIFESNESVRE------------KRGSFEHFRTADEHRD 167
LDLSR + LW ET L + RA ++ S+ E ++ ++E + DEH D
Sbjct: 134 LDLSRPDDLWVTMETLLKQARAA--ADRSITELDKLQPGVKQALRKKAWEKY---DEHPD 188
Query: 168 KGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKR 227
K ++ FPVPL+++GGKYD+F++ + K++I + LR++AH GASLLF S L+ R
Sbjct: 189 KEMVDPFPVPLVIVGGKYDVFQDFDSEKRKIICKTLRFVAHNYGASLLFFSLKMKQLIDR 248
Query: 228 TRDILNHYAFSSHLAS--AVNFDYNKPIFVPFGTDSVASI 265
R + NH +F + ++ ++NKPI++P G D I
Sbjct: 249 GRVMFNHLSFGAAAPQLKSMQLEHNKPIYIPAGADGFQQI 288
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 109/198 (55%), Gaps = 21/198 (10%)
Query: 705 KYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSL 764
KYD DK ++ FPVPL+++GGKYD+F++ + K++I + LR++AH GASLLF S
Sbjct: 182 KYDEHPDKEMVDPFPVPLVIVGGKYDVFQDFDSEKRKIICKTLRFVAHNYGASLLFFSLK 241
Query: 765 DPGLVKRTRDILNHYAFSSHLAS--AVNFDYNKPIFVPFGTDSVASI------EGTTQYV 816
L+ R R + NH +F + ++ ++NKPI++P G D I EG +
Sbjct: 242 MKQLIDRGRVMFNHLSFGAAAPQLKSMQLEHNKPIYIPAGADGFQQIGPPPLPEGNVGTM 301
Query: 817 TAGSTSSLDKYKHIFTTHFLQDDPSQNKSKSAP----DPALDQNYSEPVIDSLRNQKLEQ 872
+A + L +K FT HF Q + P DPA D Y+E ID++R QK E+
Sbjct: 302 SARNPVEL--WKQAFTGHFPQ-------VSAVPTVQDDPAKDPQYAESSIDAMRQQKDEE 352
Query: 873 LDQMRREVDMKDKYRTRV 890
L++ R+ + K + R+
Sbjct: 353 LERYRKNAERKAREIARM 370
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 56/268 (20%)
Query: 388 VTADICHLWELGSGT--SRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+ D+ ++WELG GT SRL + ++ ++ + ++L+LDLSR + LW ET L
Sbjct: 96 LAKDVVNIWELGGGTFLSRL----VDTAINVNSVRQLAVMLVLDLSRPDDLWVTMETLLK 151
Query: 446 KFRAIFESNESVRE------------KRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKY 493
+ RA ++ S+ E ++ ++E + DEH DK ++ FPVPL+++GGKY
Sbjct: 152 QARAA--ADRSITELDKLQPGVKQALRKKAWEKY---DEHPDKEMVDPFPVPLVIVGGKY 206
Query: 494 DLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDP 553
D+F+D + K++I + LR++AH GASLLF S
Sbjct: 207 DVFQD-----------------------FDSEKRKIICKTLRFVAHNYGASLLFFSLKMK 243
Query: 554 GLVKRTRDILNHYAFSSHLAS--AVNFDYNKPIFVPFGTDSVASI------EGTTQYVTA 605
L+ R R + NH +F + ++ ++NKPI++P G D I EG ++A
Sbjct: 244 QLIDRGRVMFNHLSFGAAAPQLKSMQLEHNKPIYIPAGADGFQQIGPPPLPEGNVGTMSA 303
Query: 606 --DTEVGRKHLTTKYSSNSALGLMNDNP 631
E+ ++ T + SA+ + D+P
Sbjct: 304 RNPVELWKQAFTGHFPQVSAVPTVQDDP 331
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLAS--AVN 362
++ + K++I + LR++AH GASLLF S L+ R R + NH +F + ++
Sbjct: 210 QDFDSEKRKIICKTLRFVAHNYGASLLFFSLKMKQLIDRGRVMFNHLSFGAAAPQLKSMQ 269
Query: 363 FDYNKPIFVPFGTDSVASI------EGTTQYVTA-DICHLWE 397
++NKPI++P G D I EG ++A + LW+
Sbjct: 270 LEHNKPIYIPAGADGFQQIGPPPLPEGNVGTMSARNPVELWK 311
>gi|170036805|ref|XP_001846252.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167879695|gb|EDS43078.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 344
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 156/269 (57%), Gaps = 15/269 (5%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
++++DIA++L + + S + + ERT+ ++G+K GKSTL+ RFL+++D P+
Sbjct: 13 ETIQDIALKLVTEQLKNDS-----HLKVGPSERTIFVLGSKGAGKSTLINRFLDRDDVPR 67
Query: 64 PTLALEYIYARK--SGKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLML 120
PTLALEY + R+ SG+ K+IC++WELGS + ++ + F S L F+ V++L
Sbjct: 68 PTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPFRSHGLAT---FSAVIVL 124
Query: 121 DLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFR--TADEHRDKGLIRTFPVPL 178
DLS + LWT+ E L + E N S +E E R +H D + P P+
Sbjct: 125 DLSLPDRLWTDLECVLNGLKQALEKNCSSKEIAEMQEAMRQKVGSDHVDLNTLEVLPFPV 184
Query: 179 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 238
I++GGKYD F+NL+ K+ +CLR +AH GA+L+F++S + L K TRD +N+ F
Sbjct: 185 IIVGGKYDQFQNLDSEIKKHVCRCLRSIAHAIGAALIFYTSKNTALTKMTRDAMNYLGFG 244
Query: 239 --SHLASAVNFDYNKPIFVPFGTDSVASI 265
S+ D+N PI +PFG DS I
Sbjct: 245 SPSNPFKTTAADHNGPIVIPFGADSWEKI 273
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 386 QYVTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 444
Q +IC++WELGS + ++ + F S L F+ V++LDLS + LWT+ E L
Sbjct: 84 QGAQKNICNVWELGSLVNSNQLIEVPFRSHGLAT---FSAVIVLDLSLPDRLWTDLECVL 140
Query: 445 AKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRT 504
+ E N S +E E R +G + D +
Sbjct: 141 NGLKQALEKNCSSKEIAEMQEAMRQK------------------VGSDH---VDLNTLEV 179
Query: 505 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 564
P P+I++GGKYD F+NL+ K+ +CLR +AH GA+L+F++S + L K TRD +N
Sbjct: 180 LPFPVIIVGGKYDQFQNLDSEIKKHVCRCLRSIAHAIGAALIFYTSKNTALTKMTRDAMN 239
Query: 565 HYAFS--SHLASAVNFDYNKPIFVPFGTDSVASI 596
+ F S+ D+N PI +PFG DS I
Sbjct: 240 YLGFGSPSNPFKTTAADHNGPIVIPFGADSWEKI 273
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D + P P+I++GGKYD F+NL+ K+ +CLR +AH GA+L+F++S + L K
Sbjct: 173 DLNTLEVLPFPVIIVGGKYDQFQNLDSEIKKHVCRCLRSIAHAIGAALIFYTSKNTALTK 232
Query: 771 RTRDILNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYK 828
TRD +N+ F S+ D+N PI +PFG DS I G T S+ ++
Sbjct: 233 MTRDAMNYLGFGSPSNPFKTTAADHNGPIVIPFGADSWEKI-GVT-------PSNSERIG 284
Query: 829 HIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKY 886
+++ Q K DPA D + E VID LR K E+L ++ ++ +M+ K+
Sbjct: 285 LNYSSQIPQ--VGTEKVAIPDDPAKDGGFRERVIDELRALKDEELMRLLKDTEMRMKF 340
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS--SHLASAVN 362
+NL+ K+ +CLR +AH GA+L+F++S + L K TRD +N+ F S+
Sbjct: 195 QNLDSEIKKHVCRCLRSIAHAIGAALIFYTSKNTALTKMTRDAMNYLGFGSPSNPFKTTA 254
Query: 363 FDYNKPIFVPFGTDSVASI 381
D+N PI +PFG DS I
Sbjct: 255 ADHNGPIVIPFGADSWEKI 273
>gi|390366204|ref|XP_794270.3| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Strongylocentrotus purpuratus]
Length = 395
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 162/272 (59%), Gaps = 14/272 (5%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
KS+ DIAI A KH + S + + + E +L IG+K+ GK++++ RFLEK + PK
Sbjct: 39 KSIWDIAILEAEQKHATESKEQGG--EAKGSENHILFIGSKNAGKTSIILRFLEKEEAPK 96
Query: 64 PTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDL 122
PT+ALEY + R++ G ++KDICH+WELG GT ++ + S S +L++++DL
Sbjct: 97 PTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSS--SLMVVMDL 154
Query: 123 SRLNSLWTEAETFLAK--------FRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTF 174
S+ LW ET + ++ +++K R +H D+ ++ F
Sbjct: 155 SQPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRDMLDPF 214
Query: 175 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 234
P+PL+++G KYD++++ +P K+++ + LR++AH GA+L F S+ L+ RT+++++H
Sbjct: 215 PLPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSH 274
Query: 235 YAFSSHLA-SAVNFDYNKPIFVPFGTDSVASI 265
AF + L+ ++ D NKPI VPFG DS+ I
Sbjct: 275 LAFGTTLSLKTISIDPNKPISVPFGLDSLEQI 306
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 112/181 (61%), Gaps = 10/181 (5%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ ++ FP+PL+++G KYD++++ +P K+++ + LR++AH GA+L F S+ L+
Sbjct: 207 DRDMLDPFPLPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMS 266
Query: 771 RTRDILNHYAFSSHLA-SAVNFDYNKPIFVPFGTDSVASIE----GTTQYVTAGSTSSLD 825
RT+++++H AF + L+ ++ D NKPI VPFG DS+ I + + + LD
Sbjct: 267 RTKNLVSHLAFGTTLSLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLD 326
Query: 826 KYKHIFTTHFLQDDPSQNKSKS-APDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKD 884
+K FT++F P ++ K+ DP+ D Y+E +D++R QK ++L++ R++ + +
Sbjct: 327 LWKQAFTSYF----PQKSTIKAIVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRA 382
Query: 885 K 885
K
Sbjct: 383 K 383
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 126/230 (54%), Gaps = 21/230 (9%)
Query: 388 VTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKF 447
+ DICH+WELG GT ++ + S S +L++++DLS+ LW ET +
Sbjct: 114 MVKDICHIWELGGGTFLSQLTEIPLSEDTIMSS--SLMVVMDLSQPYELWHTMETLI--- 168
Query: 448 RAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPV 507
+ + E V K + + D+ +++ R IG + D+ ++ FP+
Sbjct: 169 KGALDHVEQVISKAARNDP-KIQDKIKERAWKR--------IGIDH---PDRDMLDPFPL 216
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
PL+++G KYD++++ +P K+++ + LR++AH GA+L F S+ L+ RT+++++H A
Sbjct: 217 PLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSHLA 276
Query: 568 FSSHLA-SAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKHLTT 616
F + L+ ++ D NKPI VPFG DS+ I AD ++GR + T
Sbjct: 277 FGTTLSLKTISIDPNKPISVPFGLDSLEQIGLPP---VADDDLGRSNART 323
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLA-SAVNF 363
++ +P K+++ + LR++AH GA+L F S+ L+ RT+++++H AF + L+ ++
Sbjct: 229 QDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSHLAFGTTLSLKTISI 288
Query: 364 DYNKPIFVPFGTDSVASI 381
D NKPI VPFG DS+ I
Sbjct: 289 DPNKPISVPFGLDSLEQI 306
>gi|340380847|ref|XP_003388933.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Amphimedon queenslandica]
Length = 427
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 148/247 (59%), Gaps = 15/247 (6%)
Query: 30 DIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLW 88
+ +SQE + IG K+ GK+TL+ +FLE+ +TPKPT LEY Y R++ G + KD+ HLW
Sbjct: 90 ETKSQETNVFFIGCKNSGKTTLILKFLEREETPKPTTGLEYTYGRRTRGMNLAKDVAHLW 149
Query: 89 ELGSGTSRLEVASLFSSFSLTAQ--SGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESN 146
ELG GT S + LT S +++++LDLS+ + LW E+ + + R+ +S
Sbjct: 150 ELGGGT----FLSQLLNIPLTTDTISNSSVLIILDLSKPDELWDVMESLINELRSRIKSI 205
Query: 147 ES-VREKRGSF--EHFRTADE-----HRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRI 198
S +R + + R A E H D+ ++ P+P+ IG KYD+F++ +P KK+I
Sbjct: 206 VSDLRSTNPAIVTDLRRKAKEKHGAGHPDEPVLTPLPIPVAFIGTKYDVFQDFDPEKKKI 265
Query: 199 AVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFG 258
+ LR++AH GASL + S+ LV R R ++ H+AF+ L AV+ DYNKP+ VP G
Sbjct: 266 ISRTLRFVAHKYGASLYYFSNKSETLVTRCRQVITHFAFNGPLNQAVSMDYNKPLIVPVG 325
Query: 259 TDSVASI 265
+DS+ I
Sbjct: 326 SDSIGQI 332
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 10/187 (5%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ ++ P+P+ IG KYD+F++ +P KK+I + LR++AH GASL + S+ LV
Sbjct: 234 DEPVLTPLPIPVAFIGTKYDVFQDFDPEKKKIISRTLRFVAHKYGASLYYFSNKSETLVT 293
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI-------EGTTQYVTAGSTSS 823
R R ++ H+AF+ L AV+ DYNKP+ VP G+DS+ I + A S S
Sbjct: 294 RCRQVITHFAFNGPLNQAVSMDYNKPLIVPVGSDSIGQIGIPSLSSGDDLAKIGAESKSP 353
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMK 883
D +K + F Q + + DP D Y EP IDS+R+QK E+L++ ++E + K
Sbjct: 354 FDVWKQAYCGFFPQ---APKDHQIFDDPCKDLRYKEPSIDSMRSQKDEELERYKKECERK 410
Query: 884 DKYRTRV 890
+ R +
Sbjct: 411 ARQREQA 417
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 37/219 (16%)
Query: 388 VTADICHLWELGSGTSRLEVASLFSSFSLTAQ--SGFTLVLMLDLSRLNSLWTEAETFLA 445
+ D+ HLWELG GT S + LT S +++++LDLS+ + LW E+ +
Sbjct: 141 LAKDVAHLWELGGGT----FLSQLLNIPLTTDTISNSSVLIILDLSKPDELWDVMESLIN 196
Query: 446 KFRAIFESNES-VREKRGSF--EHFRTADE-----HRDKGLIRTFPVPLILIGGKYDLFE 497
+ R+ +S S +R + + R A E H D+ ++ P+P+ IG KYD+F+
Sbjct: 197 ELRSRIKSIVSDLRSTNPAIVTDLRRKAKEKHGAGHPDEPVLTPLPIPVAFIGTKYDVFQ 256
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
D +P KK+I + LR++AH GASL + S+ LV
Sbjct: 257 D-----------------------FDPEKKKIISRTLRFVAHKYGASLYYFSNKSETLVT 293
Query: 558 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
R R ++ H+AF+ L AV+ DYNKP+ VP G+DS+ I
Sbjct: 294 RCRQVITHFAFNGPLNQAVSMDYNKPLIVPVGSDSIGQI 332
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P KK+I + LR++AH GASL + S+ LV R R ++ H+AF+ L AV+ D
Sbjct: 256 QDFDPEKKKIISRTLRFVAHKYGASLYYFSNKSETLVTRCRQVITHFAFNGPLNQAVSMD 315
Query: 365 YNKPIFVPFGTDSVASI 381
YNKP+ VP G+DS+ I
Sbjct: 316 YNKPLIVPVGSDSIGQI 332
>gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST]
gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST]
Length = 339
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 162/273 (59%), Gaps = 23/273 (8%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
++++DIAI+L + + S ++ ERTL ++G+K VGKSTL+ RFL+++D P+
Sbjct: 7 ETIQDIAIKLVTEQLRNES-----RLATTPTERTLFVLGSKGVGKSTLINRFLDRDDVPR 61
Query: 64 PTLALEYIYARK--SGKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLML 120
PTLALEY + RK SG+ K+IC++WELGS + ++ + S L F+ ++ML
Sbjct: 62 PTLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQT---FSCIVML 118
Query: 121 DLSRLNSLWTEAETFLAKFR------AIFESNESVREKRGSFEHFRTADEHRDKGLIRTF 174
DLS+ + LWT+ E+ L + A+ E ++E R EH D + F
Sbjct: 119 DLSQPDRLWTDLESVLNGLKQATAKHAVAGQIEEMKELTAQ----RIGKEHPDLSTLELF 174
Query: 175 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 234
P P++++GGKYD+++N + ++ +CLR +AH GA+L+++S+ + L K RD +NH
Sbjct: 175 PFPIVIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRDTMNH 234
Query: 235 YAFS--SHLASAVNFDYNKPIFVPFGTDSVASI 265
F S+ A +FD++ P+ +PFG DS A I
Sbjct: 235 LGFGSPSNPFRAASFDHSSPLAIPFGADSWARI 267
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 39/220 (17%)
Query: 386 QYVTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 444
Q +IC++WELGS + ++ + S L F+ ++MLDLS+ + LWT+ E+ L
Sbjct: 78 QGAQKNICNVWELGSLANSSQLIEMPIRSHGLQT---FSCIVMLDLSQPDRLWTDLESVL 134
Query: 445 AKFR------AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFED 498
+ A+ E ++E R EH D + FP P++++GG
Sbjct: 135 NGLKQATAKHAVAGQIEEMKELTAQ----RIGKEHPDLSTLELFPFPIVIVGG------- 183
Query: 499 KGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKR 558
KYD+++N + ++ +CLR +AH GA+L+++S+ + L K
Sbjct: 184 ----------------KYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKL 227
Query: 559 TRDILNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASI 596
RD +NH F S+ A +FD++ P+ +PFG DS A I
Sbjct: 228 VRDTMNHLGFGSPSNPFRAASFDHSSPLAIPFGADSWARI 267
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 100/178 (56%), Gaps = 11/178 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D + FP P++++GGKYD+++N + ++ +CLR +AH GA+L+++S+ + L K
Sbjct: 167 DLSTLELFPFPIVIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSK 226
Query: 771 RTRDILNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYK 828
RD +NH F S+ A +FD++ P+ +PFG DS A I G T S+ ++
Sbjct: 227 LVRDTMNHLGFGSPSNPFRAASFDHSSPLAIPFGADSWARI-GVT-------PSNSERIG 278
Query: 829 HIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKY 886
F+T Q P N DPA D + E ID LR+QK E+L + ++ +++ K+
Sbjct: 279 LSFSTQIPQ-LPIGNGGILPDDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMKF 335
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS--SHLASAVN 362
+N + ++ +CLR +AH GA+L+++S+ + L K RD +NH F S+ A +
Sbjct: 189 QNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRDTMNHLGFGSPSNPFRAAS 248
Query: 363 FDYNKPIFVPFGTDSVASI 381
FD++ P+ +PFG DS A I
Sbjct: 249 FDHSSPLAIPFGADSWARI 267
>gi|291225840|ref|XP_002732906.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 365
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 162/284 (57%), Gaps = 31/284 (10%)
Query: 2 GPKSLKDIAIELAHGKHPSPSSSEVHKIDIQSQE-------RTLLLIGTKSVGKSTLVFR 54
G ++L DIAI A S + H+ + ++QE ++ IG+K GK++++ R
Sbjct: 4 GERNLWDIAINEAE-----ISQRQSHQTEGENQEGLKRGEESSVFFIGSKDAGKTSIILR 58
Query: 55 FLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQ-- 111
FL+K++ PKPT ALEY + R++ G + KD+ H+WELG GT S + A+
Sbjct: 59 FLDKDEIPKPTTALEYTFGRRAKGHNIAKDVGHIWELGGGT----FLSKLVEIPINAECL 114
Query: 112 SGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---SNESVRE-------KRGSFEHFRT 161
+VL+LDLS+ + LW ET L R E + S+R+ K ++ F
Sbjct: 115 ENLAIVLILDLSKPHELWHTMETLLNTTRQRIEKVMQDASMRDSTLQPRMKNKAWSKF-- 172
Query: 162 ADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLD 221
++H DK +I FPVPL++IG KYD+F++ + K+++ + LR++AH +GA+L F S
Sbjct: 173 GEDHPDKDMIEPFPVPLVIIGCKYDVFQDFDSEKRKVICRTLRFVAHSHGATLQFCSLKT 232
Query: 222 PGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
LV RTR +++H+ F++ + A+ D NKP+ VP G DS+ I
Sbjct: 233 ESLVTRTRQLISHFVFNTASSKAMAVDPNKPVIVPAGMDSLQQI 276
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 12/185 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
DK +I FPVPL++IG KYD+F++ + K+++ + LR++AH +GA+L F S LV
Sbjct: 178 DKDMIEPFPVPLVIIGCKYDVFQDFDSEKRKVICRTLRFVAHSHGATLQFCSLKTESLVT 237
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
RTR +++H+ F++ + A+ D NKP+ VP G DS+ I EG +TA + L
Sbjct: 238 RTRQLISHFVFNTASSKAMAVDPNKPVIVPAGMDSLQQIGPPPVAEGDIGKLTA--RNPL 295
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKD 884
+ +K +T F P Q S A DPA D YSE +D++R QK E+L++ RR+ + K
Sbjct: 296 ELWKQAYTAFF----PQQISSSVAEDPAKDPQYSESAVDNMRAQKDEELERYRRQSERKA 351
Query: 885 KYRTR 889
K R
Sbjct: 352 KDLAR 356
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 41/221 (18%)
Query: 388 VTADICHLWELGSGTSRLEVASLFSSFSLTAQ--SGFTLVLMLDLSRLNSLWTEAETFLA 445
+ D+ H+WELG GT S + A+ +VL+LDLS+ + LW ET L
Sbjct: 85 IAKDVGHIWELGGGT----FLSKLVEIPINAECLENLAIVLILDLSKPHELWHTMETLLN 140
Query: 446 KFRAIFE---SNESVRE-------KRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDL 495
R E + S+R+ K ++ F ++H DK +I FPVPL++IG KYD+
Sbjct: 141 TTRQRIEKVMQDASMRDSTLQPRMKNKAWSKF--GEDHPDKDMIEPFPVPLVIIGCKYDV 198
Query: 496 FEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGL 555
F+D + K+++ + LR++AH +GA+L F S L
Sbjct: 199 FQD-----------------------FDSEKRKVICRTLRFVAHSHGATLQFCSLKTESL 235
Query: 556 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
V RTR +++H+ F++ + A+ D NKP+ VP G DS+ I
Sbjct: 236 VTRTRQLISHFVFNTASSKAMAVDPNKPVIVPAGMDSLQQI 276
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH +GA+L F S LV RTR +++H+ F++ + A+ D
Sbjct: 200 QDFDSEKRKVICRTLRFVAHSHGATLQFCSLKTESLVTRTRQLISHFVFNTASSKAMAVD 259
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+ VP G DS+ I G DI L
Sbjct: 260 PNKPVIVPAGMDSLQQI-GPPPVAEGDIGKL 289
>gi|334312825|ref|XP_001382193.2| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Monodelphis domestica]
Length = 409
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 149/243 (61%), Gaps = 18/243 (7%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 89 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 148
Query: 94 TSRLEVASLFSSFSLTAQS--GFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE------- 144
TS L++ S+ +T +S F+LVL+LDLS+ N LW E+ L +A +
Sbjct: 149 TSLLDLISI----PITNESLRTFSLVLVLDLSKPNDLWPTMESLLQVTKAHVDKLIMKLG 204
Query: 145 --SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQC 202
S ++ E R D H D+ LI FP+PL++IG KYD+F++ + K++I +
Sbjct: 205 KTSTKAASEMRQKMWSNMQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKIICKT 263
Query: 203 LRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSV 262
LR+++H GASL+F S + L+ + R ++N AF + +++ D NKP+F+P G DS+
Sbjct: 264 LRFVSHYYGASLMFASKSE-ALLLKIRGVINQLAFGIDKSKSISVDQNKPLFIPAGLDSL 322
Query: 263 ASI 265
+ I
Sbjct: 323 SQI 325
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 123/228 (53%), Gaps = 25/228 (10%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQS--GFTLVLMLDLSRLNSLWTEAETFLAKFR 448
DI H WELG GTS L++ S+ +T +S F+LVL+LDLS+ N LW E+ L +
Sbjct: 138 DIAHFWELGGGTSLLDLISI----PITNESLRTFSLVLVLDLSKPNDLWPTMESLLQVTK 193
Query: 449 AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
A + + K G + A E R K + D+ LI FP+P
Sbjct: 194 AHVDK---LIMKLGK-TSTKAASEMRQK-----------MWSNMQKDHPDRELIDPFPIP 238
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
L++IG KYD+F++ + K++I + LR+++H GASL+F S + L+ + R ++N AF
Sbjct: 239 LVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMFASKSE-ALLLKIRGVINQLAF 297
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKHLTT 616
+ +++ D NKP+F+P G DS++ I ++ E+G+ H T
Sbjct: 298 GIDKSKSISVDQNKPLFIPAGLDSLSQIGSPP---LSENEIGKLHAQT 342
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 101/172 (58%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ + K++I + LR+++H GASL+F S + L+
Sbjct: 228 DRELIDPFPIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMFASKSE-ALLL 286
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE----GTTQYVTAGSTSSLDK 826
+ R ++N AF + +++ D NKP+F+P G DS++ I + + + ++
Sbjct: 287 KIRGVINQLAFGIDKSKSISVDQNKPLFIPAGLDSLSQIGSPPLSENEIGKLHAQTPMEL 346
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N SK DPA D Y+E +D +R QK ++L+Q ++
Sbjct: 347 WKKVYEKVFPPK--SANTSKETRDPARDPQYAESEVDEMRAQKDQELEQYKK 396
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K++I + LR+++H GASL+F S + L+ + R ++N AF + +++ D
Sbjct: 250 QDFDSEKRKIICKTLRFVSHYYGASLMFASKSE-ALLLKIRGVINQLAFGIDKSKSISVD 308
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+P G DS++ I
Sbjct: 309 QNKPLFIPAGLDSLSQI 325
>gi|350423272|ref|XP_003493427.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Bombus impatiens]
Length = 345
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 149/239 (62%), Gaps = 6/239 (2%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWEL 90
I++ ER+ +++G+K VGK+T+V RFLEK++ PKPT+A++Y + RK+GK+++K+I H+WE+
Sbjct: 30 IETHERSFIIVGSKRVGKTTIVHRFLEKDEAPKPTIAMDYSFGRKAGKSLIKNIVHVWEV 89
Query: 91 GSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVR 150
G TS L A++ S + T+++MLDLS+ LWT TF F + + +
Sbjct: 90 GHLTSSLVSAAMTGSSLTHSPHHVTVLIMLDLSQPEILWT---TFEEAFSVVRNAMKMSY 146
Query: 151 EKRGSFEHFRTADEHRDKGLIRT---FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLA 207
+ + E + + R K + R FP+ L LIGGKYD F++L +K + + LR A
Sbjct: 147 DDKIIQELKQQRIKERKKAVEREVDPFPMKLCLIGGKYDQFKDLSLDKIELVGKILRATA 206
Query: 208 HVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 266
HV GA L +HS+ D L++RT+D+L+HY F + D+ KP+ + G DS++SI+
Sbjct: 207 HVLGAGLYYHSAKDKSLLRRTKDLLSHYGFGIQFSDTKCTDFEKPLAISAGADSLSSID 265
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 95/157 (60%), Gaps = 4/157 (2%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
FP+ L LIGGKYD F++L +K + + LR AHV GA L +HS+ D L++RT+D+L+
Sbjct: 173 FPMKLCLIGGKYDQFKDLSLDKIELVGKILRATAHVLGAGLYYHSAKDKSLLRRTKDLLS 232
Query: 778 HYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQ 837
HY F + D+ KP+ + G DS++SI+ Q+ ++ LD K I+ T Q
Sbjct: 233 HYGFGIQFSDTKCTDFEKPLAISAGADSLSSID--LQFPQTRPSAILDTIKQIYVTRIPQ 290
Query: 838 DDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLD 874
+ S++ DP+ D N++EP+ID LR Q+ E+++
Sbjct: 291 E--SRSNEIILEDPSNDPNFNEPIIDRLRAQREEEIN 325
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 23/207 (11%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
+I H+WE+G TS L A++ S + T+++MLDLS+ LWT TF F +
Sbjct: 82 NIVHVWEVGHLTSSLVSAAMTGSSLTHSPHHVTVLIMLDLSQPEILWT---TFEEAFSVV 138
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
+ + + + E + + R K + R + FP+ L
Sbjct: 139 RNAMKMSYDDKIIQELKQQRIKERKKAVERE--------------------VDPFPMKLC 178
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
LIGGKYD F++L +K + + LR AHV GA L +HS+ D L++RT+D+L+HY F
Sbjct: 179 LIGGKYDQFKDLSLDKIELVGKILRATAHVLGAGLYYHSAKDKSLLRRTKDLLSHYGFGI 238
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASIE 597
+ D+ KP+ + G DS++SI+
Sbjct: 239 QFSDTKCTDFEKPLAISAGADSLSSID 265
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++L +K + + LR AHV GA L +HS+ D L++RT+D+L+HY F + D
Sbjct: 188 KDLSLDKIELVGKILRATAHVLGAGLYYHSAKDKSLLRRTKDLLSHYGFGIQFSDTKCTD 247
Query: 365 YNKPIFVPFGTDSVASIE 382
+ KP+ + G DS++SI+
Sbjct: 248 FEKPLAISAGADSLSSID 265
>gi|395508102|ref|XP_003758354.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1
[Sarcophilus harrisii]
Length = 351
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 153/267 (57%), Gaps = 12/267 (4%)
Query: 8 DIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLA 67
D E+A + SE I+ E+++ IG+K+ GK+T++ R L++++ PKPTLA
Sbjct: 4 DTLWEIAKAEVEKKEISENGGDGIEVCEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLA 63
Query: 68 LEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLN 126
LEY Y R++ G KDI H WELG GTS L++ ++ + F+LVL+LDLSR N
Sbjct: 64 LEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLITI--PITNETLRTFSLVLVLDLSRPN 121
Query: 127 SLWTEAETFLAKFRA--------IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPL 178
LW E+ L + + ++N + +H D+ LI FP+PL
Sbjct: 122 DLWPTMESLLQITKTHVDKLIVKLGKTNAKAASEMRQKMWSNMQKDHPDRELIDPFPIPL 181
Query: 179 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 238
++IG KYD+F++ + K++I + LR+++H GASL+F S + L+ + R ++N AF
Sbjct: 182 VIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMFASKSE-ALLLKIRGVINQLAFG 240
Query: 239 SHLASAVNFDYNKPIFVPFGTDSVASI 265
+ +++ D NKP+F+P G DS++ I
Sbjct: 241 IDKSKSISVDQNKPLFIPAGLDSLSQI 267
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 34/214 (15%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA- 449
DI H WELG GTS L++ ++ + F+LVL+LDLSR N LW E+ L +
Sbjct: 80 DIAHFWELGGGTSLLDLITI--PITNETLRTFSLVLVLDLSRPNDLWPTMESLLQITKTH 137
Query: 450 -------IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLI 502
+ ++N + +H D+ LI FP+PL++IG KYD+F+D
Sbjct: 138 VDKLIVKLGKTNAKAASEMRQKMWSNMQKDHPDRELIDPFPIPLVIIGSKYDIFQD---- 193
Query: 503 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 562
+ K++I + LR+++H GASL+F S + L+ + R +
Sbjct: 194 -------------------FDSEKRKIICKTLRFVSHYYGASLMFASKSE-ALLLKIRGV 233
Query: 563 LNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
+N AF + +++ D NKP+F+P G DS++ I
Sbjct: 234 INQLAFGIDKSKSISVDQNKPLFIPAGLDSLSQI 267
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ + K++I + LR+++H GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMFASKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE----GTTQYVTAGSTSSLDK 826
+ R ++N AF + +++ D NKP+F+P G DS++ I + + +D
Sbjct: 229 KIRGVINQLAFGIDKSKSISVDQNKPLFIPAGLDSLSQIGSPPLSENDLGQLHAQTPMDL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S + SK DPA D Y+E +D +R QK ++L+Q ++
Sbjct: 289 WKKVYEKVFPPK--SASTSKETRDPARDPQYAESEVDEMRAQKDQELEQYKK 338
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K++I + LR+++H GASL+F S + L+ + R ++N AF + +++ D
Sbjct: 192 QDFDSEKRKIICKTLRFVSHYYGASLMFASKSE-ALLLKIRGVINQLAFGIDKSKSISVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+P G DS++ I
Sbjct: 251 QNKPLFIPAGLDSLSQI 267
>gi|403269606|ref|XP_003926812.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 150/246 (60%), Gaps = 16/246 (6%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWE 89
++ E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WE
Sbjct: 27 VEIGEKSVFFIGSKNAGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWE 86
Query: 90 LGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---- 144
LG GTS L++ S+ +S +L F+LVL+LDLS+ N LW E L ++ +
Sbjct: 87 LGGGTSLLDLISIPITSDTLRI---FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIM 143
Query: 145 -----SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIA 199
++++V E R + D H D+ +I FPVPL++IG KYD+F++ E K+++
Sbjct: 144 KLGKTNSKAVSEMRQKIWNNMQKD-HPDREIIDPFPVPLVIIGSKYDIFQDFESEKRKVI 202
Query: 200 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 259
+ LR++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G
Sbjct: 203 CKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGL 261
Query: 260 DSVASI 265
DS + I
Sbjct: 262 DSFSQI 267
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 26/210 (12%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F+LVL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISIPITSDTLRI---FSLVLVLDLSKPNDLWPTMENLL---QA 133
Query: 450 IFESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+ V K G + + E R K + + P D+ +I FP
Sbjct: 134 TKSHVDKVIMKLGK-TNSKAVSEMRQKIWNNMQKDHP--------------DREIIDPFP 178
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
VPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 179 VPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 237
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
AF + ++ D NKP+F+ G DS + I
Sbjct: 238 AFGIDKSKSICVDQNKPLFITAGLDSFSQI 267
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ +I FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DREIIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS + I E + A S L
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFSQIGSPPVPENDIGKLDAHSPMEL 288
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 --WKKVYEKLFPPK--STNMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS + I G+ DI L
Sbjct: 251 QNKPLFITAGLDSFSQI-GSPPVPENDIGKL 280
>gi|26986541|ref|NP_758460.1| cytoplasmic dynein 2 light intermediate chain 1 [Mus musculus]
gi|81900869|sp|Q8K0T2.1|DC2L1_MOUSE RecName: Full=Cytoplasmic dynein 2 light intermediate chain 1;
Short=mD2LIC
gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus]
gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus]
Length = 351
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 146/241 (60%), Gaps = 14/241 (5%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L+++++ KPTLALEY Y RK+ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDESAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ ++ F++VL+LDLS+ N LW+ E L ++ +
Sbjct: 91 TSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWSTMENLLQATKSHVDKVIMKLGKT 148
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
S+++ E R D H D+ LI FP+PL++IG KYD+F++ +P K+++ + LR
Sbjct: 149 SSKASAEMRQRMWSVVQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLR 207
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS+
Sbjct: 208 FVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQ 266
Query: 265 I 265
I
Sbjct: 267 I 267
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 39/230 (16%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ ++ F++VL+LDLS+ N LW+ E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWSTMENLLQATKSH 137
Query: 451 FE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGL 501
+ S+++ E R D H D+ LI FP+PL++IG KYD+F+D
Sbjct: 138 VDKVIMKLGKTSSKASAEMRQRMWSVVQKD-HPDRELIDPFPIPLVIIGSKYDIFQD--- 193
Query: 502 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 561
+P K+++ + LR++AH GASL+F S + L+ + R
Sbjct: 194 --------------------FDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRG 232
Query: 562 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGR 611
++N AF + ++ D NKP+F+ G DS+ I D+++G+
Sbjct: 233 VINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPP---VPDSDIGK 279
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 97/172 (56%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS+ I + + S ++
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMEL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S K+ DPA D Y+E +D +R QK ++L+ +R
Sbjct: 289 WKKVYDKLFPPK--STGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKR 338
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS+ I G+ +DI L
Sbjct: 251 QNKPLFITAGLDSLCQI-GSPPVPDSDIGKL 280
>gi|380013064|ref|XP_003690590.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Apis florea]
Length = 345
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 152/238 (63%), Gaps = 6/238 (2%)
Query: 32 QSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELG 91
++ ER+++++G+K VGK+T++ RFLEK++TPKPT+A++Y + RK+GK+++K+I H+WE+G
Sbjct: 31 ETHERSIIIVGSKRVGKTTIIHRFLEKDETPKPTIAMDYSFGRKAGKSLIKNIVHVWEVG 90
Query: 92 SGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---SNES 148
TS L A++ S T+++MLDLS+ LWT E L+ R + ++
Sbjct: 91 HLTSSLVSAAMTGSSLTHFPHHVTILVMLDLSQPEILWTTFEEALSVVRNAMKMSYDDKI 150
Query: 149 VREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAH 208
+++ + R R+ I FP+ L IGGKYD F++L+ +K + + LR +AH
Sbjct: 151 IQDLKKQRIKERKKIMERE---IDPFPMRLCFIGGKYDQFKDLDLDKIELVGKTLRAVAH 207
Query: 209 VNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 266
+ GASL +HS+ D L++RT+D+L++Y F + + D+ KP+ + GTDS +SI+
Sbjct: 208 ILGASLYYHSAKDKSLLRRTKDLLSYYGFGTQFSDIKCTDFEKPLAISAGTDSFSSID 265
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 100/160 (62%), Gaps = 4/160 (2%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
I FP+ L IGGKYD F++L+ +K + + LR +AH+ GASL +HS+ D L++RT+D
Sbjct: 170 IDPFPMRLCFIGGKYDQFKDLDLDKIELVGKTLRAVAHILGASLYYHSAKDKSLLRRTKD 229
Query: 775 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTH 834
+L++Y F + + D+ KP+ + GTDS +SI+ Q+ ++ LD K I+ TH
Sbjct: 230 LLSYYGFGTQFSDIKCTDFEKPLAISAGTDSFSSID--LQFPQTRPSAILDTIKQIYVTH 287
Query: 835 FLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLD 874
Q+ S++ DP+ D N++EP+ID LR Q+ E+++
Sbjct: 288 IPQE--SRSNEIILEDPSNDPNFNEPIIDRLRTQREEEIN 325
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 29/210 (13%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
+I H+WE+G TS L A++ S T+++MLDLS+ LWT E L+ R
Sbjct: 82 NIVHVWEVGHLTSSLVSAAMTGSSLTHFPHHVTILVMLDLSQPEILWTTFEEALSVVRNA 141
Query: 451 FE---SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPV 507
+ ++ +++ + R R+ I FP+ L IGGKYD F+D
Sbjct: 142 MKMSYDDKIIQDLKKQRIKERKKIMERE---IDPFPMRLCFIGGKYDQFKD--------- 189
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
L+ +K + + LR +AH+ GASL +HS+ D L++RT+D+L++Y
Sbjct: 190 --------------LDLDKIELVGKTLRAVAHILGASLYYHSAKDKSLLRRTKDLLSYYG 235
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASIE 597
F + + D+ KP+ + GTDS +SI+
Sbjct: 236 FGTQFSDIKCTDFEKPLAISAGTDSFSSID 265
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 52/78 (66%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++L+ +K + + LR +AH+ GASL +HS+ D L++RT+D+L++Y F + + D
Sbjct: 188 KDLDLDKIELVGKTLRAVAHILGASLYYHSAKDKSLLRRTKDLLSYYGFGTQFSDIKCTD 247
Query: 365 YNKPIFVPFGTDSVASIE 382
+ KP+ + GTDS +SI+
Sbjct: 248 FEKPLAISAGTDSFSSID 265
>gi|156547707|ref|XP_001605037.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Nasonia vitripennis]
Length = 357
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 144/243 (59%), Gaps = 8/243 (3%)
Query: 32 QSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELG 91
+S E++L+++G++ VGK+T+++RFLEK DTPKPTLA++Y Y RK+GK+++KD+ H+WE+G
Sbjct: 32 ESHEKSLIILGSREVGKTTMIYRFLEKEDTPKPTLAMDYSYGRKAGKSLVKDVVHVWEVG 91
Query: 92 SGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIF------ES 145
L S+ + T+++MLDL + + LW E L RA E
Sbjct: 92 HLAPSLISGSMRGCTLSHSAHHTTVLIMLDLGKPDVLWNSLEECLVAVRAAMMMSYQQEL 151
Query: 146 NESVREKRGSFEHFRTADEHRDKGLI-RTFPVPLILIGGKYDLFENLEPNKKRIAV-QCL 203
+RE++ + R D+ + FP+ L LIGGKYD F L + ++ Q L
Sbjct: 152 VHDLRERKIRYLRERAKPGTEDEPPVDDPFPMRLCLIGGKYDEFRELHSGDDKESIGQAL 211
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R AHV GA L +HS+ D L++RT+++L+HY F A DY+KP+ V G+DS +
Sbjct: 212 RAAAHVLGAGLHYHSAKDSHLLRRTKELLSHYGFKGQSTKASVTDYDKPLSVAAGSDSFS 271
Query: 264 SIE 266
+I+
Sbjct: 272 AID 274
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 4/165 (2%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAV-QCLRYLAHVNGASLLFHSSLDPGLVKRTRDIL 776
FP+ L LIGGKYD F L + ++ Q LR AHV GA L +HS+ D L++RT+++L
Sbjct: 181 FPMRLCLIGGKYDEFRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKELL 240
Query: 777 NHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFL 836
+HY F A DY+KP+ V G+DS ++I+ T LD+ K I+ F
Sbjct: 241 SHYGFKGQSTKASVTDYDKPLSVAAGSDSFSAIDLKISRNDYAVT--LDEIKQIYVRRFP 298
Query: 837 QDDPSQNK-SKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREV 880
Q +Q+ DPA D N++EP++D LR Q+ +++ + R++
Sbjct: 299 QVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRDM 343
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 388 VTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKF 447
+ D+ H+WE+G L S+ + T+++MLDL + + LW E L
Sbjct: 80 LVKDVVHVWEVGHLAPSLISGSMRGCTLSHSAHHTTVLIMLDLGKPDVLWNSLEECLVAV 139
Query: 448 RAIF------ESNESVREKRGSFEHFRTADEHRDKGLIR-TFPVPLILIGGKYDLFEDKG 500
RA E +RE++ + R D+ + FP+ L LIGGKYD F +
Sbjct: 140 RAAMMMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDDPFPMRLCLIGGKYDEFRE-- 197
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 560
L G +K+ I Q LR AHV GA L +HS+ D L++RT+
Sbjct: 198 ----------LHSGD---------DKESIG-QALRAAAHVLGAGLHYHSAKDSHLLRRTK 237
Query: 561 DILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 597
++L+HY F A DY+KP+ V G+DS ++I+
Sbjct: 238 ELLSHYGFKGQSTKASVTDYDKPLSVAAGSDSFSAID 274
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 317 QCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTD 376
Q LR AHV GA L +HS+ D L++RT+++L+HY F A DY+KP+ V G+D
Sbjct: 209 QALRAAAHVLGAGLHYHSAKDSHLLRRTKELLSHYGFKGQSTKASVTDYDKPLSVAAGSD 268
Query: 377 SVASIE 382
S ++I+
Sbjct: 269 SFSAID 274
>gi|340719074|ref|XP_003397982.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Bombus terrestris]
Length = 345
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 149/239 (62%), Gaps = 6/239 (2%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWEL 90
I++ ER+ +++G+K VGK+T+V RFLEK++ PKPT+A++Y + RK+GK+++K+I H+WE+
Sbjct: 30 IETHERSFIIVGSKGVGKTTIVHRFLEKDEAPKPTIAMDYSFGRKAGKSLIKNIVHVWEV 89
Query: 91 GSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVR 150
G TS L A++ S + T++++LDLS+ LWT TF F + + +
Sbjct: 90 GHLTSSLVSAAMTGSSLTHSPHHVTVLIILDLSQPEILWT---TFEEAFSVVRNAMKMSY 146
Query: 151 EKRGSFEHFRTADEHRDKGL---IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLA 207
+ + E + + R K + + FP+ L LIGGKYD F++L +K + + LR A
Sbjct: 147 DDKIIQELKQQRIKERKKAVEKEVDPFPMKLCLIGGKYDQFKDLSLDKIELVGKILRATA 206
Query: 208 HVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 266
H+ GA L +HS+ D L++RT+D+L+HY F + D+ KP+ + G DS++SI+
Sbjct: 207 HILGAGLYYHSAKDKSLLRRTKDLLSHYGFGIQFSDIKCTDFEKPLAISAGADSLSSID 265
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 94/157 (59%), Gaps = 4/157 (2%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
FP+ L LIGGKYD F++L +K + + LR AH+ GA L +HS+ D L++RT+D+L+
Sbjct: 173 FPMKLCLIGGKYDQFKDLSLDKIELVGKILRATAHILGAGLYYHSAKDKSLLRRTKDLLS 232
Query: 778 HYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQ 837
HY F + D+ KP+ + G DS++SI+ Q+ ++ L K I+ T Q
Sbjct: 233 HYGFGIQFSDIKCTDFEKPLAISAGADSLSSID--LQFPQTRPSAILATIKQIYVTRIPQ 290
Query: 838 DDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLD 874
+ S++ DP+ D N++EP+ID LR Q+ E+++
Sbjct: 291 E--SRSNEIILEDPSNDPNFNEPIIDRLRAQREEEIN 325
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 29/210 (13%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
+I H+WE+G TS L A++ S + T++++LDLS+ LWT TF F +
Sbjct: 82 NIVHVWEVGHLTSSLVSAAMTGSSLTHSPHHVTVLIILDLSQPEILWT---TFEEAFSVV 138
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGL---IRTFPVPLILIGGKYDLFEDKGLIRTFPV 507
+ + + + E + + R K + + FP+ L LIGGKYD F+D L
Sbjct: 139 RNAMKMSYDDKIIQELKQQRIKERKKAVEKEVDPFPMKLCLIGGKYDQFKDLSL------ 192
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
+K + + LR AH+ GA L +HS+ D L++RT+D+L+HY
Sbjct: 193 -----------------DKIELVGKILRATAHILGAGLYYHSAKDKSLLRRTKDLLSHYG 235
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASIE 597
F + D+ KP+ + G DS++SI+
Sbjct: 236 FGIQFSDIKCTDFEKPLAISAGADSLSSID 265
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++L +K + + LR AH+ GA L +HS+ D L++RT+D+L+HY F + D
Sbjct: 188 KDLSLDKIELVGKILRATAHILGAGLYYHSAKDKSLLRRTKDLLSHYGFGIQFSDIKCTD 247
Query: 365 YNKPIFVPFGTDSVASIE 382
+ KP+ + G DS++SI+
Sbjct: 248 FEKPLAISAGADSLSSID 265
>gi|383859694|ref|XP_003705327.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Megachile rotundata]
Length = 345
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 153/240 (63%), Gaps = 10/240 (4%)
Query: 32 QSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELG 91
+S ER+++++G+K+VGK+T+V RFLEK++TPKPT+A++Y Y RK GK+++K++ H+WE+G
Sbjct: 31 ESHERSIIVVGSKNVGKTTIVHRFLEKDETPKPTIAIDYSYGRKIGKSLIKNVVHIWEIG 90
Query: 92 SGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVR- 150
+S L A++ + + T++LMLDLS SLWT E + R+ + + R
Sbjct: 91 YLSSSLMSAAMSGVSLTHSPAHTTILLMLDLSEPESLWTTFEEIFSIIRSAMKMSYDDRT 150
Query: 151 ----EKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYL 206
++R E ++ ++ D FP+ L +IGGKYD F+ L+ K+ + + LR +
Sbjct: 151 IQDLKQRRINERKKSLEKEVD-----PFPLKLCIIGGKYDQFKGLDTGKRELIGKTLRAI 205
Query: 207 AHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 266
AH A L +HSS D LV++T+DIL+HY F + L+++ D+ KP+ + GTD +SI+
Sbjct: 206 AHTLEAGLYYHSSKDKMLVRQTKDILSHYGFGTQLSNSKCVDFEKPLTIAPGTDCFSSID 265
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 95/156 (60%), Gaps = 4/156 (2%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
FP+ L +IGGKYD F+ L+ K+ + + LR +AH A L +HSS D LV++T+DIL+
Sbjct: 173 FPLKLCIIGGKYDQFKGLDTGKRELIGKTLRAIAHTLEAGLYYHSSKDKMLVRQTKDILS 232
Query: 778 HYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQ 837
HY F + L+++ D+ KP+ + GTD +SI+ Q+ + LD KH++ Q
Sbjct: 233 HYGFGTQLSNSKCVDFEKPLTIAPGTDCFSSID--LQFPPTRPAAILDAIKHVYVASIPQ 290
Query: 838 DDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQL 873
+ S+N DP+ D N++EP+ID LR Q+ E++
Sbjct: 291 E--SKNNDIILKDPSNDFNFNEPIIDKLRAQREEEI 324
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 33/212 (15%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
++ H+WE+G +S L A++ + + T++LMLDLS SLWT E + R+
Sbjct: 82 NVVHIWEIGYLSSSLMSAAMSGVSLTHSPAHTTILLMLDLSEPESLWTTFEEIFSIIRSA 141
Query: 451 FESNESVR-----EKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTF 505
+ + R ++R E ++ ++ D FP+ L +IGGKYD F KG
Sbjct: 142 MKMSYDDRTIQDLKQRRINERKKSLEKEVD-----PFPLKLCIIGGKYDQF--KG----- 189
Query: 506 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 565
L+ K+ + + LR +AH A L +HSS D LV++T+DIL+H
Sbjct: 190 ----------------LDTGKRELIGKTLRAIAHTLEAGLYYHSSKDKMLVRQTKDILSH 233
Query: 566 YAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 597
Y F + L+++ D+ KP+ + GTD +SI+
Sbjct: 234 YGFGTQLSNSKCVDFEKPLTIAPGTDCFSSID 265
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+ L+ K+ + + LR +AH A L +HSS D LV++T+DIL+HY F + L+++ D
Sbjct: 188 KGLDTGKRELIGKTLRAIAHTLEAGLYYHSSKDKMLVRQTKDILSHYGFGTQLSNSKCVD 247
Query: 365 YNKPIFVPFGTDSVASIE 382
+ KP+ + GTD +SI+
Sbjct: 248 FEKPLTIAPGTDCFSSID 265
>gi|402890705|ref|XP_003908618.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1 [Papio
anubis]
Length = 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 147/242 (60%), Gaps = 16/242 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE-------- 144
TS L++ S+ +S +L F+LVL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISVPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGK 147
Query: 145 -SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
+ ++V E R + D H D+ LI FPVPL++IG KYD+F++ E K+++ + L
Sbjct: 148 TNPKAVSEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTL 206
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS +
Sbjct: 207 RFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFS 265
Query: 264 SI 265
I
Sbjct: 266 QI 267
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 111/216 (51%), Gaps = 38/216 (17%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F+LVL+LDLS+ N LW E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISVPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLLQATKS 136
Query: 450 IFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKG 500
+ + ++V E R + D H D+ LI FPVPL++IG KYD+F+D
Sbjct: 137 HVDKVIMKLGKTNPKAVSEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQD-- 193
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 560
E K+++ + LR++AH GASL+F S + L+ + R
Sbjct: 194 ---------------------FESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIR 231
Query: 561 DILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
++N AF + ++ D NKP+F+ G DS + I
Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFSQI 267
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 98/174 (56%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS + I E + A S L
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFSQIGSPPIPENDIGKLHAHSPMEL 288
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K+ DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 --WKKVYEKLFPPK--SINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS + I G+ DI L
Sbjct: 251 QNKPLFITAGLDSFSQI-GSPPIPENDIGKL 280
>gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus]
Length = 341
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 155/270 (57%), Gaps = 27/270 (10%)
Query: 19 PSPSSSEVHKIDIQSQ-------------ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPT 65
PS + E+ K ++Q + E++L IG+K+ GK+T++ R L+++++ KPT
Sbjct: 2 PSETLWEIAKAEVQKRRSHGSEGDGAEIGEKSLFFIGSKNGGKTTIILRCLDRDESAKPT 61
Query: 66 LALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSR 124
LALEY Y RK+ G KDI H WELG GTS L++ S+ ++ F++VL+LDLS+
Sbjct: 62 LALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISI--PITVDTLRTFSIVLVLDLSK 119
Query: 125 LNSLWTEAETFLAKFRAIFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFP 175
N W+ E L ++ + S+++ E R D H D+ LI FP
Sbjct: 120 PNDHWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKD-HPDRELIDPFP 178
Query: 176 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 235
+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 179 IPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 237
Query: 236 AFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
AF + ++ D NKP+F+ G DS+ I
Sbjct: 238 AFGIDKSKSICVDQNKPLFITAGLDSLCQI 267
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 115/230 (50%), Gaps = 39/230 (16%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ ++ F++VL+LDLS+ N W+ E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDHWSTMENLLQATKSH 137
Query: 451 FE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGL 501
+ S+++ E R D H D+ LI FP+PL++IG KYD+F+D
Sbjct: 138 VDKVIMKLGKTSSKASAEMRQRMWSVVQKD-HPDRELIDPFPIPLVIIGSKYDIFQD--- 193
Query: 502 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 561
+P K+++ + LR++AH GASL+F S + L+ + R
Sbjct: 194 --------------------FDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRG 232
Query: 562 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGR 611
++N AF + ++ D NKP+F+ G DS+ I D+++G+
Sbjct: 233 VINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPP---VPDSDIGK 279
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS+ I + + S ++
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMEL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQK 869
+K ++ F S K+ DPA D Y+E +D +R +
Sbjct: 289 WKKVYDKLFPPK--STGTLKAVQDPARDPQYAESEVDEMRGSE 329
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS+ I G+ +DI L
Sbjct: 251 QNKPLFITAGLDSLCQI-GSPPVPDSDIGKL 280
>gi|114577181|ref|XP_001142891.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1 isoform
1 [Pan troglodytes]
gi|397475493|ref|XP_003809172.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1 [Pan
paniscus]
gi|410207266|gb|JAA00852.1| dynein, cytoplasmic 2, light intermediate chain 1 [Pan troglodytes]
gi|410255282|gb|JAA15608.1| dynein, cytoplasmic 2, light intermediate chain 1 [Pan troglodytes]
gi|410300004|gb|JAA28602.1| dynein, cytoplasmic 2, light intermediate chain 1 [Pan troglodytes]
gi|410338659|gb|JAA38276.1| dynein, cytoplasmic 2, light intermediate chain 1 [Pan troglodytes]
Length = 351
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 146/242 (60%), Gaps = 16/242 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE-------- 144
TS L++ S+ +S +L F+LVL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISIPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGK 147
Query: 145 -SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
+ ++V E R + D H D+ LI FPVPL++IG KYD+F++ E K+++ + L
Sbjct: 148 TNAKAVSEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTL 206
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS
Sbjct: 207 RFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFG 265
Query: 264 SI 265
I
Sbjct: 266 QI 267
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 26/210 (12%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F+LVL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISIPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLL---QA 133
Query: 450 IFESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+ V K G + + E R K + + P D+ LI FP
Sbjct: 134 TKSHVDKVIMKLGK-TNAKAVSEMRQKIWNNMQKDHP--------------DRELIDPFP 178
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
VPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 179 VPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 237
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
AF + ++ D NKP+F+ G DS I
Sbjct: 238 AFGIDKSKSICVDQNKPLFITAGLDSFGQI 267
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS I E + A S L
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 288
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 --WKKVYEKLFPPK--SINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS I G+ DI L
Sbjct: 251 QNKPLFITAGLDSFGQI-GSPPVPENDIGKL 280
>gi|110748807|ref|XP_001121791.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Apis mellifera]
Length = 345
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 153/239 (64%), Gaps = 8/239 (3%)
Query: 32 QSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELG 91
++ ER+++++G+K VGK+T+V RFLEK++ PKPT+A++Y + RK+GK+++K+I H+WE+G
Sbjct: 31 ETHERSIIIVGSKRVGKTTIVHRFLEKDEAPKPTIAMDYSFGRKAGKSLIKNIVHVWEVG 90
Query: 92 SGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---SNES 148
TS L A++ S + T++++LDLS+ LWT E L+ R + ++
Sbjct: 91 HLTSSLVSAAMTGSSLTHSPHHVTILVILDLSQPEILWTTFEEALSVVRNAMKMSYDDKI 150
Query: 149 VRE-KRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLA 207
++E K+ + + E I FP+ L IGGKYD F++L+ +K+ + + LR +A
Sbjct: 151 IQELKKQRIKERKKIVEKE----IDPFPMRLCFIGGKYDQFKDLDLDKQELVGKTLRAVA 206
Query: 208 HVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 266
H+ GASL +HS+ D L++R +D+L++Y F + + D+ KP+ + GTDS +SI+
Sbjct: 207 HILGASLYYHSAKDKSLLRRIKDLLSYYGFGTQFSDIKCTDFEKPLAISAGTDSFSSID 265
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 100/160 (62%), Gaps = 4/160 (2%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
I FP+ L IGGKYD F++L+ +K+ + + LR +AH+ GASL +HS+ D L++R +D
Sbjct: 170 IDPFPMRLCFIGGKYDQFKDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKD 229
Query: 775 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTH 834
+L++Y F + + D+ KP+ + GTDS +SI+ Q+ ++ LD K I+ TH
Sbjct: 230 LLSYYGFGTQFSDIKCTDFEKPLAISAGTDSFSSID--LQFPQTRPSAMLDTIKQIYVTH 287
Query: 835 FLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLD 874
Q+ S++ DP+ D N++EP+ID LR Q+ E+++
Sbjct: 288 IPQE--SRSNEIILEDPSNDPNFNEPIIDRLRTQREEEIN 325
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 31/211 (14%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
+I H+WE+G TS L A++ S + T++++LDLS+ LWT E L+ R
Sbjct: 82 NIVHVWEVGHLTSSLVSAAMTGSSLTHSPHHVTILVILDLSQPEILWTTFEEALSVVRNA 141
Query: 451 FE---SNESVRE-KRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+ ++ ++E K+ + + E I FP+ L IGGKYD F+D
Sbjct: 142 MKMSYDDKIIQELKKQRIKERKKIVEKE----IDPFPMRLCFIGGKYDQFKD-------- 189
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
L+ +K+ + + LR +AH+ GASL +HS+ D L++R +D+L++Y
Sbjct: 190 ---------------LDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKDLLSYY 234
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASIE 597
F + + D+ KP+ + GTDS +SI+
Sbjct: 235 GFGTQFSDIKCTDFEKPLAISAGTDSFSSID 265
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 52/78 (66%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++L+ +K+ + + LR +AH+ GASL +HS+ D L++R +D+L++Y F + + D
Sbjct: 188 KDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKDLLSYYGFGTQFSDIKCTD 247
Query: 365 YNKPIFVPFGTDSVASIE 382
+ KP+ + GTDS +SI+
Sbjct: 248 FEKPLAISAGTDSFSSID 265
>gi|301605620|ref|XP_002932438.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Xenopus (Silurana) tropicalis]
Length = 368
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 164/284 (57%), Gaps = 20/284 (7%)
Query: 5 SLKDIAI-ELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
+L DIAI E+ ++ + EV ++ ER++ IG K+ GK+T + R L++++ PK
Sbjct: 7 NLWDIAISEVQQKENAGDGNEEVE----ENSERSVFFIGNKNGGKTTTILRCLDRDEAPK 62
Query: 64 PTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLD 121
PTLALEY + R++ G KDI H WELG GTS L++ + +S +L + F++VL+LD
Sbjct: 63 PTLALEYTFGRRAKGHNTPKDIAHFWELGGGTSLLDLIQIPITSDNLMS---FSVVLVLD 119
Query: 122 LSRLNSLWTEAETFLAKFR--------AIFESNESVREKRGSFEHFRTADEHRDKGLIRT 173
LS+ N LW E+ L R I +++ + + +H D+ LI
Sbjct: 120 LSKPNELWPTMESLLETTRKHVDKIITGIAKNSSKIANQIKQKLWQTIPKDHPDRELIDP 179
Query: 174 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKR-TRDIL 232
FP+PL++ G KYD+F++ + ++I + LR++AH GASLLF S D ++K TR +
Sbjct: 180 FPLPLLIAGSKYDIFQDFDSEIRKIICKTLRFVAHYYGASLLFTSKSDALMLKGVTRSFI 239
Query: 233 NHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASL 276
NH AF + +++ D+NKP+ +P G+DS + I G+ D +
Sbjct: 240 NHLAFGLDKSKSLSIDHNKPLIIPAGSDSFSQI-GSPPASDTDI 282
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 117/208 (56%), Gaps = 20/208 (9%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ + +S +L + F++VL+LDLS+ N LW E+ L R
Sbjct: 83 DIAHFWELGGGTSLLDLIQIPITSDNLMS---FSVVLVLDLSKPNELWPTMESLLETTRK 139
Query: 450 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPL 509
+ + K S + A++ + K L +T P D+ LI FP+PL
Sbjct: 140 HVDKIITGIAKNSS----KIANQIKQK-LWQTIPKD----------HPDRELIDPFPLPL 184
Query: 510 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKR-TRDILNHYAF 568
++ G KYD+F++ + ++I + LR++AH GASLLF S D ++K TR +NH AF
Sbjct: 185 LIAGSKYDIFQDFDSEIRKIICKTLRFVAHYYGASLLFTSKSDALMLKGVTRSFINHLAF 244
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSVASI 596
+ +++ D+NKP+ +P G+DS + I
Sbjct: 245 GLDKSKSLSIDHNKPLIIPAGSDSFSQI 272
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 11/178 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++ G KYD+F++ + ++I + LR++AH GASLLF S D ++K
Sbjct: 173 DRELIDPFPLPLLIAGSKYDIFQDFDSEIRKIICKTLRFVAHYYGASLLFTSKSDALMLK 232
Query: 771 R-TRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGST----SSLD 825
TR +NH AF + +++ D+NKP+ +P G+DS + I T S + ++
Sbjct: 233 GVTRSFINHLAFGLDKSKSLSIDHNKPLIIPAGSDSFSQIGSPPASDTDISQFRVRTPME 292
Query: 826 KYKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVD 881
+K +F +F P +N + K DPA D YSE +D++R K + + + D
Sbjct: 293 LWKKVFEKNF----PPKNTNDFKETRDPAKDPQYSEAEVDAMRALKDQNTNDFKETRD 346
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 312 KRIAVQCLRYLAHVNGASLLFHSSLDPGLVKR-TRDILNHYAFSSHLASAVNFDYNKPIF 370
++I + LR++AH GASLLF S D ++K TR +NH AF + +++ D+NKP+
Sbjct: 202 RKIICKTLRFVAHYYGASLLFTSKSDALMLKGVTRSFINHLAFGLDKSKSLSIDHNKPLI 261
Query: 371 VPFGTDSVASIEGTTQYVTADICHL 395
+P G+DS + I G+ DI
Sbjct: 262 IPAGSDSFSQI-GSPPASDTDISQF 285
>gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens]
Length = 350
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 144/241 (59%), Gaps = 15/241 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+ + IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ + F+LVL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKT 148
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
+ ++V E R ++ A++H D LI FPVPL++IG KYD+F++ E K+++ + LR
Sbjct: 149 NAKAVSEMRQKIWNY--AEDHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLR 206
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS
Sbjct: 207 FVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQ 265
Query: 265 I 265
I
Sbjct: 266 I 266
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 113/223 (50%), Gaps = 22/223 (9%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ + F+LVL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLL---QAT 134
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
+ V K G + + E R K I + D LI FPVPL+
Sbjct: 135 KSHVDKVIMKLGK-TNAKAVSEMRQK------------IWNYAEDHPDHELIDPFPVPLV 181
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
+IG KYD+F++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 182 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGI 240
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+ ++ D NKP+F+ G DS I + ++G+ H
Sbjct: 241 DKSKSICVDQNKPLFITAGLDSFGQIGSPP---VPENDIGKLH 280
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 169 DHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 227
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS I E + A S L
Sbjct: 228 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 287
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK +L+Q +R
Sbjct: 288 --WKKVYEKLFPPK--SINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKR 337
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 191 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 249
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS I G+ DI L
Sbjct: 250 QNKPLFITAGLDSFGQI-GSPPVPENDIGKL 279
>gi|426335377|ref|XP_004029201.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1 [Gorilla
gorilla gorilla]
Length = 351
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 146/242 (60%), Gaps = 16/242 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNRPKDIAHFWELGGG 90
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE-------- 144
TS L++ S+ +S +L F+LVL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISIPITSDTLRM---FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGK 147
Query: 145 -SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
+ ++V E R + D H D+ LI FPVPL++IG KYD+F++ E K+++ + L
Sbjct: 148 TNAKAVSEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTL 206
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS
Sbjct: 207 RFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFG 265
Query: 264 SI 265
I
Sbjct: 266 QI 267
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 29/227 (12%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F+LVL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISIPITSDTLRM---FSLVLVLDLSKPNDLWPTMENLL---QA 133
Query: 450 IFESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+ V K G + + E R K + + P D+ LI FP
Sbjct: 134 TKSHVDKVIMKLGK-TNAKAVSEMRQKIWNNMQKDHP--------------DRELIDPFP 178
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
VPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 179 VPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 237
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
AF + ++ D NKP+F+ G DS I + ++G+ H
Sbjct: 238 AFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPP---VPENDIGKLH 281
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS I E + A S L
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 288
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 --WKKVYEKLFPPK--SINTLKDMKDPARDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS I G+ DI L
Sbjct: 251 QNKPLFITAGLDSFGQI-GSPPVPENDIGKL 280
>gi|84000073|ref|NP_001033140.1| cytoplasmic dynein 2 light intermediate chain 1 [Bos taurus]
gi|122138665|sp|Q32KV4.1|DC2L1_BOVIN RecName: Full=Cytoplasmic dynein 2 light intermediate chain 1
gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus]
gi|296482570|tpg|DAA24685.1| TPA: cytoplasmic dynein 2 light intermediate chain 1 [Bos taurus]
Length = 351
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 156/265 (58%), Gaps = 16/265 (6%)
Query: 12 ELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYI 71
E+A + SSE + E+++ IG+K+ GK+T++ R L++++ PKPTLALEY
Sbjct: 8 EIAKAEVEKRGSSENEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYT 67
Query: 72 YARKS-GKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLW 129
Y R++ G + KDI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW
Sbjct: 68 YGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLW 124
Query: 130 TEAETFLAKFRAIFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLIL 180
E L + + ++++ E R D H D+ L+ FP+PL++
Sbjct: 125 PTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKD-HPDRELLDPFPIPLVI 183
Query: 181 IGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSH 240
IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF +
Sbjct: 184 IGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIN 242
Query: 241 LASAVNFDYNKPIFVPFGTDSVASI 265
+ ++ D NKP+F+ G DS++ I
Sbjct: 243 KSKSICVDQNKPLFITAGLDSLSQI 267
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 125/230 (54%), Gaps = 29/230 (12%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 77 IPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLL-- 131
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIR 503
+A + + V K G ++ + A E R K + + P D+ L+
Sbjct: 132 -QATKLNIDKVIMKLGK-KNSKAASEMRQKMWSNMQKDHP--------------DRELLD 175
Query: 504 TFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDIL 563
FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++
Sbjct: 176 PFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVI 234
Query: 564 NHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
N AF + + ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 235 NQLAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPP---LPDNDIGKLH 281
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ L+ FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELLDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + + ++ D NKP+F+ G DS++ I + S +D
Sbjct: 229 KIRGVINQLAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 WKKVYEKLFPPK--SINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + + ++ D
Sbjct: 192 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGINKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS++ I
Sbjct: 251 QNKPLFITAGLDSLSQI 267
>gi|172045715|sp|Q6AY43.2|DC2L1_RAT RecName: Full=Cytoplasmic dynein 2 light intermediate chain 1
Length = 351
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 144/241 (59%), Gaps = 14/241 (5%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ KPTLALEY Y RK+ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDEPAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ ++ F++VL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWPTMENLLQATKSHVDKVTMKLGKA 148
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
++++ E R D H D+ LI FP+PL++IG KYD+F++ +P K+++ + LR
Sbjct: 149 NSKASSEMRQRMWSVMQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLR 207
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS+
Sbjct: 208 FVAHYYGASLMFTSKSE-ALLLKMRGVINQLAFGIDKSKSMCVDQNKPLFITAGLDSLCQ 266
Query: 265 I 265
I
Sbjct: 267 I 267
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 119/224 (53%), Gaps = 27/224 (12%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ ++ F++VL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWPTMENLL---QAT 134
Query: 451 FESNESVREKRGSFEHFRTADEHRDKG---LIRTFPVPLILIGGKYDLFEDKGLIRTFPV 507
+ V K G + + + E R + + + P D+ LI FP+
Sbjct: 135 KSHVDKVTMKLGK-ANSKASSEMRQRMWSVMQKDHP--------------DRELIDPFPI 179
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+ + R ++N A
Sbjct: 180 PLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKMRGVINQLA 238
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGR 611
F + ++ D NKP+F+ G DS+ I D+++G+
Sbjct: 239 FGIDKSKSMCVDQNKPLFITAGLDSLCQIGSPP---VPDSDIGK 279
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 101/174 (58%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS+ I + + S ++
Sbjct: 229 KMRGVINQLAFGIDKSKSMCVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMEL 288
Query: 827 YKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F P ++ S K+ DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 WKKVYEKLF----PPKSTSTLKAIQDPARDPQYAESEVDEMRVQKDQELEQYKR 338
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKMRGVINQLAFGIDKSKSMCVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS+ I G+ +DI L
Sbjct: 251 QNKPLFITAGLDSLCQI-GSPPVPDSDIGKL 280
>gi|426223757|ref|XP_004006040.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1 [Ovis
aries]
Length = 351
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 150/246 (60%), Gaps = 16/246 (6%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWE 89
++ E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G + KDI H WE
Sbjct: 27 VEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWE 86
Query: 90 LGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---- 144
LG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L + +
Sbjct: 87 LGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQATKLNVDKVIM 143
Query: 145 -----SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIA 199
++++ E R D H D+ LI FP+PL++IG KYD+F++ + K+++
Sbjct: 144 KLGKKNSKAASEMRQKMWSNMQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVI 202
Query: 200 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 259
+ LR++AH GASL+F S + L+ + R ++N AF + + ++ D NKP+F+ G
Sbjct: 203 CKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGINKSKSICVDQNKPLFITAGL 261
Query: 260 DSVASI 265
DS++ I
Sbjct: 262 DSLSQI 267
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 125/230 (54%), Gaps = 29/230 (12%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 77 IPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLL-- 131
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIR 503
+A + + V K G ++ + A E R K + + P D+ LI
Sbjct: 132 -QATKLNVDKVIMKLGK-KNSKAASEMRQKMWSNMQKDHP--------------DRELID 175
Query: 504 TFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDIL 563
FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++
Sbjct: 176 PFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVI 234
Query: 564 NHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
N AF + + ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 235 NQLAFGINKSKSICVDQNKPLFITAGLDSLSQIGSPP---LPDNDIGKFH 281
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 9/173 (5%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAG-----STSSLD 825
+ R ++N AF + + ++ D NKP+F+ G DS++ I G+ + S +D
Sbjct: 229 KIRGVINQLAFGINKSKSICVDQNKPLFITAGLDSLSQI-GSPPLPDNDIGKFHARSPMD 287
Query: 826 KYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 288 LWKKVYEKLFPPK--SINTLKDVKDPAQDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + + ++ D
Sbjct: 192 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGINKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS++ I
Sbjct: 251 QNKPLFITAGLDSLSQI 267
>gi|380813644|gb|AFE78696.1| cytoplasmic dynein 2 light intermediate chain 1 isoform 1 [Macaca
mulatta]
Length = 351
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 146/242 (60%), Gaps = 16/242 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE-------- 144
TS L++ S+ +S +L F+LVL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISVPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGK 147
Query: 145 -SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
+ ++ E R + D H D+ LI FPVPL++IG KYD+F++ E K+++ + L
Sbjct: 148 TNPKAASEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTL 206
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS +
Sbjct: 207 RFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFS 265
Query: 264 SI 265
I
Sbjct: 266 QI 267
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 41/233 (17%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F+LVL+LDLS+ N LW E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISVPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLLQATKS 136
Query: 450 IFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKG 500
+ + ++ E R + D H D+ LI FPVPL++IG KYD+F+D
Sbjct: 137 HVDKMIMKLGKTNPKAASEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQD-- 193
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 560
E K+++ + LR++AH GASL+F S + L+ + R
Sbjct: 194 ---------------------FESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIR 231
Query: 561 DILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
++N AF + ++ D NKP+F+ G DS + I + ++G+ H
Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFSQIGSPP---VPENDIGKLH 281
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 98/174 (56%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS + I E + A S L
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFSQIGSPPVPENDIGKLHAHSPMEL 288
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K+ DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 --WKKVYEKLFPPK--SINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS + I G+ DI L
Sbjct: 251 QNKPLFITAGLDSFSQI-GSPPVPENDIGKL 280
>gi|348574648|ref|XP_003473102.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Cavia porcellus]
Length = 351
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 146/248 (58%), Gaps = 20/248 (8%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWE 89
++ E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WE
Sbjct: 27 VEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWE 86
Query: 90 LGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE----- 144
LG GTS L++ S+ + L F++VL+LDLS+ N LW E L R+ +
Sbjct: 87 LGGGTSLLDLISIPITSDLLRT--FSIVLVLDLSKPNHLWPTMENLLQATRSHVDKVIMK 144
Query: 145 -------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKR 197
+ +R+K S EH D+ LI FPVPL++IG KYD+F++ + K++
Sbjct: 145 LGRTNSKAASEMRQKMWS----TMQKEHPDRELIDPFPVPLVIIGSKYDIFQDFDSEKRK 200
Query: 198 IAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPF 257
+ + LR++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+
Sbjct: 201 VICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDRSKSICVDQNKPLFITA 259
Query: 258 GTDSVASI 265
G DS+ I
Sbjct: 260 GLDSLCQI 267
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ + L F++VL+LDLS+ N LW E L R+
Sbjct: 80 DIAHFWELGGGTSLLDLISIPITSDLLRT--FSIVLVLDLSKPNHLWPTMENLLQATRSH 137
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
+ V K G + + A E R K + D+ LI FPVPL+
Sbjct: 138 VDK---VIMKLGR-TNSKAASEMRQK-----------MWSTMQKEHPDRELIDPFPVPLV 182
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
+IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 183 IIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGI 241
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKHLTT 616
+ ++ D NKP+F+ G DS+ I D ++G+ H T
Sbjct: 242 DRSKSICVDQNKPLFITAGLDSLCQIGPPP---APDNDIGKFHAHT 284
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 97/173 (56%), Gaps = 9/173 (5%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FPVPL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPVPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI----EGTTQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS+ I + + ++
Sbjct: 229 KIRGVINQLAFGIDRSKSICVDQNKPLFITAGLDSLCQIGPPPAPDNDIGKFHAHTPMEL 288
Query: 827 YKHIFTTHFLQDDPSQ-NKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F P + N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 WKKVYEKLF---PPKRINTLKDLKDPARDPQYAESEVDEMRVQKDQELEQYKR 338
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDRSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS+ I
Sbjct: 251 QNKPLFITAGLDSLCQI 267
>gi|157119433|ref|XP_001653379.1| hypothetical protein AaeL_AAEL001491 [Aedes aegypti]
gi|108883162|gb|EAT47387.1| AAEL001491-PA [Aedes aegypti]
Length = 347
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 154/269 (57%), Gaps = 15/269 (5%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
++++DIA++L +H SS + ERT+ ++G+K GKSTL+ RFL+++D +
Sbjct: 16 ETIQDIAMKLVT-EHMKQESS----LTGGPTERTIFVLGSKGAGKSTLINRFLDRDDITR 70
Query: 64 PTLALEYIYARK--SGKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLML 120
PTLALEY + R+ SG+ K+IC++WELGS + ++ + S L A F V++L
Sbjct: 71 PTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAA---FAAVIVL 127
Query: 121 DLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFR--TADEHRDKGLIRTFPVPL 178
DLS+ + LWT+ + L + N S +E E + +H D + P P+
Sbjct: 128 DLSQPDRLWTDLQCILNGLKQAISKNCSPKEVSEMQERMKQKVGLDHEDLNTLEILPFPV 187
Query: 179 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 238
I++GGKYD F+N++ K+ +CLR ++H GA+L+F++S + L K RD +NH F
Sbjct: 188 IIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRDAMNHLGFG 247
Query: 239 --SHLASAVNFDYNKPIFVPFGTDSVASI 265
S+ A D+N PI VPFG DS I
Sbjct: 248 SPSNPFKATALDHNGPIVVPFGGDSWEKI 276
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 386 QYVTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 444
Q +IC++WELGS + ++ + S L A F V++LDLS+ + LWT+ + L
Sbjct: 87 QGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAA---FAAVIVLDLSQPDRLWTDLQCIL 143
Query: 445 AKFRAIFESNESVREKRGSFEHFR--TADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLI 502
+ N S +E E + +H D + P P+I++GG
Sbjct: 144 NGLKQAISKNCSPKEVSEMQERMKQKVGLDHEDLNTLEILPFPVIIVGG----------- 192
Query: 503 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 562
KYD F+N++ K+ +CLR ++H GA+L+F++S + L K RD
Sbjct: 193 ------------KYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRDA 240
Query: 563 LNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASI 596
+NH F S+ A D+N PI VPFG DS I
Sbjct: 241 MNHLGFGSPSNPFKATALDHNGPIVVPFGGDSWEKI 276
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 99/180 (55%), Gaps = 14/180 (7%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
ED + P P+I++GGKYD F+N++ K+ +CLR ++H GA+L+F++S + L
Sbjct: 175 EDLNTLEILPFPVIIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLS 234
Query: 770 KRTRDILNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKY 827
K RD +NH F S+ A D+N PI VPFG DS I G T T+S
Sbjct: 235 KMIRDAMNHLGFGSPSNPFKATALDHNGPIVVPFGGDSWEKI-GVT------PTNS---- 283
Query: 828 KHIFTTHFLQDDPSQNKSKSAP-DPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKY 886
+ I ++ Q + S P DPA D + E VID LR QK ++L ++ ++ +M+ K+
Sbjct: 284 ERIGMSYSAQIPQVGTEKVSIPDDPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMKF 343
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS--SHLASAVN 362
+N++ K+ +CLR ++H GA+L+F++S + L K RD +NH F S+ A
Sbjct: 198 QNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRDAMNHLGFGSPSNPFKATA 257
Query: 363 FDYNKPIFVPFGTDSVASI 381
D+N PI VPFG DS I
Sbjct: 258 LDHNGPIVVPFGGDSWEKI 276
>gi|41053533|ref|NP_956774.1| cytoplasmic dynein 2 light intermediate chain 1 [Danio rerio]
gi|82187683|sp|Q7SXY4.1|DC2L1_DANRE RecName: Full=Cytoplasmic dynein 2 light intermediate chain 1
gi|32766386|gb|AAH55198.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Danio rerio]
Length = 358
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 151/257 (58%), Gaps = 22/257 (8%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
+RT+ +G+K+ GK+T++ RFLE+++T KPTLALEY + R++ G KDI HLWELG G
Sbjct: 39 QRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98
Query: 94 TSRLEVASLFSSFSLTAQ--SGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVRE 151
S ++ + +TA S ++VL+LDLS+ N+LW E+ L R E + +
Sbjct: 99 ISLSDLVQI----PITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQ 154
Query: 152 KRGSFEHFRTA------DEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRY 205
K G + ++ D+ LI FPVPL+++G K+D+F++ + K+++ + LR+
Sbjct: 155 KTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRF 214
Query: 206 LAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
LAH GASL+F SS + ++R +N AF + +++ D +KP+ +P G+DS++ I
Sbjct: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274
Query: 266 E---------GTTHGKD 273
GT H K+
Sbjct: 275 GPPVATEVDIGTLHAKN 291
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 103/175 (58%), Gaps = 6/175 (3%)
Query: 709 FEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGL 768
+ D+ LI FPVPL+++G K+D+F++ + K+++ + LR+LAH GASL+F SS
Sbjct: 174 YPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233
Query: 769 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI----EGTTQYVTAGSTSSL 824
+ ++R +N AF + +++ D +KP+ +P G+DS++ I T + +
Sbjct: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRRE 879
D +K +F F + S + K DP D +SEP+IDS+R QK ++LDQ +RE
Sbjct: 294 DLWKKVFEKVFPHE--STRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 26/225 (11%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQ--SGFTLVLMLDLSRLNSLWTEAETFLAKFR 448
DI HLWELG G S ++ + +TA S ++VL+LDLS+ N+LW E+ L R
Sbjct: 88 DIAHLWELGGGISLSDLVQI----PITADNVSFLSVVLVLDLSKPNALWETMESLLGSAR 143
Query: 449 AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
E + +K G R+ + + L + +P D+ LI FPVP
Sbjct: 144 NQVEKVCAALQKTG---ESRSGKQRVPRVLHKDYP--------------DRELISPFPVP 186
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
L+++G K+D+F++ + K+++ + LR+LAH GASL+F SS + ++R +N AF
Sbjct: 187 LLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+ +++ D +KP+ +P G+DS++ I V + ++G H
Sbjct: 247 GTERPKSISTDPSKPLAIPAGSDSLSQIGPP---VATEVDIGTLH 288
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR+LAH GASL+F SS + ++R +N AF + +++ D
Sbjct: 198 QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD 257
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
+KP+ +P G+DS++ I G DI L
Sbjct: 258 PSKPLAIPAGSDSLSQI-GPPVATEVDIGTL 287
>gi|332227312|ref|XP_003262838.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1
[Nomascus leucogenys]
Length = 351
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 146/242 (60%), Gaps = 16/242 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKTGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE-------- 144
TS L++ S+ +S +L F++VL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISIPITSDTLRT---FSVVLILDLSKPNDLWPTMENLLQATKSHIDKVLMELGK 147
Query: 145 -SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
+ ++V E R + D H D+ LI FPVPL++IG KYD+F++ E K+++ + L
Sbjct: 148 TNPKAVSEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTL 206
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R++AH GASL+F S + L+ + R ++N AF + + D NKP+F+ G DS +
Sbjct: 207 RFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDRSKSKCVDQNKPLFITAGLDSFS 265
Query: 264 SI 265
I
Sbjct: 266 QI 267
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 38/216 (17%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISIPITSDTLRT---FSVVLILDLSKPNDLWPTMENLLQATKS 136
Query: 450 IFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKG 500
+ + ++V E R + D H D+ LI FPVPL++IG KYD+F+D
Sbjct: 137 HIDKVLMELGKTNPKAVSEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQD-- 193
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 560
E K+++ + LR++AH GASL+F S + L+ + R
Sbjct: 194 ---------------------FESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIR 231
Query: 561 DILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
++N AF + + D NKP+F+ G DS + I
Sbjct: 232 GVINQLAFGIDRSKSKCVDQNKPLFITAGLDSFSQI 267
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + + D NKP+F+ G DS + I E + A S L
Sbjct: 229 KIRGVINQLAFGIDRSKSKCVDQNKPLFITAGLDSFSQIGCPPVPENDIGKLHAHSPMEL 288
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 --WKKVYEKLFPPK--SNNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + + D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDRSKSKCVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS + I
Sbjct: 251 QNKPLFITAGLDSFSQI 267
>gi|149727957|ref|XP_001499532.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Equus caballus]
Length = 351
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 151/249 (60%), Gaps = 22/249 (8%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWE 89
++ E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y RK+ G + KDI H WE
Sbjct: 27 VEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRKAKGHNIPKDIAHFWE 86
Query: 90 LGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIF----- 143
LG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L ++
Sbjct: 87 LGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQATKSHVNKVIM 143
Query: 144 -------ESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKK 196
+++ +R+K S +H D+ +I FP+PL++IG KYD+F++ + K+
Sbjct: 144 KLGKKNSKASSEMRQKIWS----NMQKDHPDREIIDPFPIPLVIIGSKYDIFQDFDSEKR 199
Query: 197 RIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVP 256
++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+
Sbjct: 200 KVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFIT 258
Query: 257 FGTDSVASI 265
G DS++ I
Sbjct: 259 AGLDSLSQI 267
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 23/227 (10%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 77 IPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLL-- 131
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+A V K G ++ + + E R K I + D D+ +I FP
Sbjct: 132 -QATKSHVNKVIMKLGK-KNSKASSEMRQK----------IWSNMQKD-HPDREIIDPFP 178
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 179 IPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 237
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
AF + ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 238 AFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPP---VPDNDIGKLH 281
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ +I FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DREIIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS++ I + S ++
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMEL 288
Query: 827 YKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F P +N + K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 WKKVYERLF----PPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS++ I G+ DI L
Sbjct: 251 QNKPLFITAGLDSLSQI-GSPPVPDNDIGKL 280
>gi|431912728|gb|ELK14746.1| Cytoplasmic dynein 2 light intermediate chain 1 [Pteropus alecto]
Length = 426
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 151/246 (61%), Gaps = 16/246 (6%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWE 89
++ E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G + KDI H WE
Sbjct: 88 VEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWE 147
Query: 90 LGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---- 144
LG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L ++ +
Sbjct: 148 LGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQATKSHVDKVIM 204
Query: 145 -----SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIA 199
++++ E R D H+D+ LI FP+PL++IG KYD+F++ + K+++
Sbjct: 205 KLGKTNSKAASEMRQKIWSNMQKD-HQDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVI 263
Query: 200 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 259
+ LR++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G
Sbjct: 264 CKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGL 322
Query: 260 DSVASI 265
DS++ I
Sbjct: 323 DSLSHI 328
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 123/227 (54%), Gaps = 23/227 (10%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 138 IPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLL-- 192
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+A + V K G + + A E R K I + D +D+ LI FP
Sbjct: 193 -QATKSHVDKVIMKLGK-TNSKAASEMRQK----------IWSNMQKD-HQDRELIDPFP 239
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 240 IPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 298
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
AF + ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 299 AFGIDKSKSICVDQNKPLFITAGLDSLSHIGSPP---VPDNDIGKLH 342
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D+ LI FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 230 QDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALL 288
Query: 770 KRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLD 825
+ R ++N AF + ++ D NKP+F+ G DS++ I + S ++
Sbjct: 289 LKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSHIGSPPVPDNDIGKLHAHSPME 348
Query: 826 KYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQK 869
+K ++ F + N K DPA D Y+E +D +R QK
Sbjct: 349 LWKKVYAKLFPPK--TVNTLKDIKDPAKDPQYAESEVDEMRIQK 390
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 253 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 311
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS++ I G+ DI L
Sbjct: 312 QNKPLFITAGLDSLSHI-GSPPVPDNDIGKL 341
>gi|301500723|ref|NP_001180393.1| cytoplasmic dynein 2 light intermediate chain 1 isoform 4 [Homo
sapiens]
gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens]
gi|62822153|gb|AAY14702.1| unknown [Homo sapiens]
gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a
[Homo sapiens]
gi|325464645|gb|ADZ16093.1| dynein, cytoplasmic 2, light intermediate chain 1 [synthetic
construct]
Length = 352
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 141/241 (58%), Gaps = 13/241 (5%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+ + IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ + F+LVL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKT 148
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
+ ++V E R + D +D LI FPVPL++IG KYD+F++ E K+++ + LR
Sbjct: 149 NAKAVSEMRQKIWNNMPKDHPQDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLR 208
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS
Sbjct: 209 FVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQ 267
Query: 265 I 265
I
Sbjct: 268 I 268
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 20/223 (8%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ + F+LVL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLL---QAT 134
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
+ V K G + + E R K + P D +D LI FPVPL+
Sbjct: 135 KSHVDKVIMKLGK-TNAKAVSEMRQK-IWNNMP---------KDHPQDHELIDPFPVPLV 183
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
+IG KYD+F++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 184 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGI 242
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+ ++ D NKP+F+ G DS I + ++G+ H
Sbjct: 243 DKSKSICVDQNKPLFITAGLDSFGQIGSPP---VPENDIGKLH 282
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 11/175 (6%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 170 QDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALL 228
Query: 770 KRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSS 823
+ R ++N AF + ++ D NKP+F+ G DS I E + A S
Sbjct: 229 LKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPME 288
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
L +K ++ F S N K DPA D Y+E +D +R QK +L+Q +R
Sbjct: 289 L--WKKVYEKLFPPK--SINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKR 339
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 193 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 251
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS I G+ DI L
Sbjct: 252 QNKPLFITAGLDSFGQI-GSPPVPENDIGKL 281
>gi|291386869|ref|XP_002709947.1| PREDICTED: dynein 2 light intermediate chain [Oryctolagus
cuniculus]
Length = 351
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 154/255 (60%), Gaps = 18/255 (7%)
Query: 22 SSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTV 80
S SE + ++I E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G
Sbjct: 20 SGSEHNGVEIG--EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNT 77
Query: 81 MKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKF 139
KDI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 78 PKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQAA 134
Query: 140 RAIFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEN 190
++ + ++++ E R D H D+ LI FP+PL++IG KYD+F++
Sbjct: 135 KSHVDKVIMKLGKVNSKAASEMRQKIWSNMQKD-HPDRELIDPFPIPLVIIGSKYDIFQD 193
Query: 191 LEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYN 250
+ K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D N
Sbjct: 194 FDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQN 252
Query: 251 KPIFVPFGTDSVASI 265
KP+F+ G DS++ I
Sbjct: 253 KPLFITAGLDSLSQI 267
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 121/224 (54%), Gaps = 23/224 (10%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLL---QA 133
Query: 450 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPL 509
+ V K G + + A E R K I + D D+ LI FP+PL
Sbjct: 134 AKSHVDKVIMKLGKV-NSKAASEMRQK----------IWSNMQKD-HPDRELIDPFPIPL 181
Query: 510 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 569
++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 182 VIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFG 240
Query: 570 SHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+ ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 241 IDKSKSICVDQNKPLFITAGLDSLSQIGSPP---VPDNDIGQFH 281
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 9/170 (5%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAG-----STSSLD 825
+ R ++N AF + ++ D NKP+F+ G DS++ I G+ + S ++
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQI-GSPPVPDNDIGQFHAHSPME 287
Query: 826 KYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQ 875
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q
Sbjct: 288 LWKKVYEKLFPPK--SVNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQ 335
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS++ I
Sbjct: 251 QNKPLFITAGLDSLSQI 267
>gi|347922203|ref|NP_001231678.1| dynein, cytoplasmic 2, light intermediate chain 1 [Sus scrofa]
Length = 351
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 149/246 (60%), Gaps = 16/246 (6%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWE 89
++ E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G + KDI H WE
Sbjct: 27 VEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWE 86
Query: 90 LGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---- 144
LG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L + +
Sbjct: 87 LGGGTSLLDLISIPITSDTLRT---FSVVLVLDLSKPNDLWPTMENLLQATKRHVDKVIM 143
Query: 145 -----SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIA 199
++++ E R D H D+ LI FP+PL++IG KYD+F++ + K+++
Sbjct: 144 KLGKKNSKAASEMRQKIWSNMQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVI 202
Query: 200 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 259
+ LR++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G
Sbjct: 203 CKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGL 261
Query: 260 DSVASI 265
DS++ I
Sbjct: 262 DSLSQI 267
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 20/210 (9%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 77 IPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSVVLVLDLSKPNDLWPTMENLL-- 131
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+A + V K G ++ + A E R K I + D D+ LI FP
Sbjct: 132 -QATKRHVDKVIMKLGK-KNSKAASEMRQK----------IWSNMQKD-HPDRELIDPFP 178
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 179 IPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 237
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
AF + ++ D NKP+F+ G DS++ I
Sbjct: 238 AFGIDKSKSICVDQNKPLFITAGLDSLSQI 267
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE----GTTQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS++ I + S +D
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGLPPVPDNDIGKIQAHSPMDL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S + K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 WKKVYEKLFPPK--SISTQKDVKDPARDPQYAECEVDEMRIQKDQELEQYKR 338
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS++ I
Sbjct: 251 QNKPLFITAGLDSLSQI 267
>gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens]
Length = 351
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 142/241 (58%), Gaps = 14/241 (5%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ + F+LVL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKT 148
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
+ ++V E R + D H D LI FPVPL++IG KYD+F++ E K+++ + LR
Sbjct: 149 NAKAVSEMRQKIWNNMPKD-HPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLR 207
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS
Sbjct: 208 FVAHYYGASLMFTSKSE-ALLLKLRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQ 266
Query: 265 I 265
I
Sbjct: 267 I 267
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 114/226 (50%), Gaps = 27/226 (11%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ + F+LVL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLL---QAT 134
Query: 451 FESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIRTFPV 507
+ V K G + + E R K + + P D LI FPV
Sbjct: 135 KSHVDKVIMKLGK-TNAKAVSEMRQKIWNNMPKDHP--------------DHELIDPFPV 179
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
PL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+ + R ++N A
Sbjct: 180 PLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKLRGVINQLA 238
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
F + ++ D NKP+F+ G DS I + ++G+ H
Sbjct: 239 FGIDKSKSICVDQNKPLFITAGLDSFGQIGSPP---VPENDIGKLH 281
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS I E + A S L
Sbjct: 229 KLRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 288
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK +L+Q +R
Sbjct: 289 --WKKVYEKLFPPK--SINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKR 338
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKLRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS I G+ DI L
Sbjct: 251 QNKPLFITAGLDSFGQI-GSPPVPENDIGKL 280
>gi|354467621|ref|XP_003496267.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Cricetulus griseus]
Length = 351
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 144/241 (59%), Gaps = 14/241 (5%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ +G+K+ GK+T++ R L++++ KPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKSVFFLGSKNGGKTTIILRCLDRDEPAKPTLALEYTYGRRTKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ ++ F++VL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISIPITYDTL--RTFSVVLVLDLSKPNDLWPTMENLLQATKSHIDKVIMKLGKT 148
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
++++ E R D H D+ LI FP+PL++IG KYD+F++ +P K+++ + LR
Sbjct: 149 NSKAASEMRQKMWSVMQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLR 207
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS+
Sbjct: 208 FVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQ 266
Query: 265 I 265
I
Sbjct: 267 I 267
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 119/224 (53%), Gaps = 27/224 (12%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ ++ F++VL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISIPITYDTL--RTFSVVLVLDLSKPNDLWPTMENLL---QAT 134
Query: 451 FESNESVREKRGSFEHFRTADEHRDKG---LIRTFPVPLILIGGKYDLFEDKGLIRTFPV 507
+ V K G + + A E R K + + P D+ LI FP+
Sbjct: 135 KSHIDKVIMKLGK-TNSKAASEMRQKMWSVMQKDHP--------------DRELIDPFPI 179
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+ + R ++N A
Sbjct: 180 PLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLA 238
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGR 611
F + ++ D NKP+F+ G DS+ I D+++G+
Sbjct: 239 FGIDKSKSICVDQNKPLFITAGLDSLCQIGSPP---VPDSDIGK 279
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 101/174 (58%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS+ I + + S ++
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMEL 288
Query: 827 YKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F P ++ S K+ DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 WKKVYEKLF----PPKSISTLKAIQDPARDPQYAESEVDEMRVQKDQELEQYKR 338
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS+ I G+ +DI L
Sbjct: 251 QNKPLFITAGLDSLCQI-GSPPVPDSDIGKL 280
>gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens]
Length = 318
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 142/241 (58%), Gaps = 14/241 (5%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 15 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 74
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ + F+LVL+LDLS+ N LW E L ++ +
Sbjct: 75 TSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKT 132
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
+ ++V E R + D H D LI FPVPL++IG KYD+F++ E K+++ + LR
Sbjct: 133 NAKAVSEMRQKIWNNMPKD-HPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLR 191
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS
Sbjct: 192 FVAHYYGASLMFTSKSE-ALLLKLRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQ 250
Query: 265 I 265
I
Sbjct: 251 I 251
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 114/226 (50%), Gaps = 27/226 (11%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ + F+LVL+LDLS+ N LW E L +A
Sbjct: 64 DIAHFWELGGGTSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLL---QAT 118
Query: 451 FESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIRTFPV 507
+ V K G + + E R K + + P D LI FPV
Sbjct: 119 KSHVDKVIMKLGK-TNAKAVSEMRQKIWNNMPKDHP--------------DHELIDPFPV 163
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
PL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+ + R ++N A
Sbjct: 164 PLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKLRGVINQLA 222
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
F + ++ D NKP+F+ G DS I + ++G+ H
Sbjct: 223 FGIDKSKSICVDQNKPLFITAGLDSFGQIGSPP---VPENDIGKLH 265
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 154 DHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 212
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS I E + A S L
Sbjct: 213 KLRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 272
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQK 869
+K ++ F S N K DPA D Y+E +D +R QK
Sbjct: 273 --WKKVYEKLFPPK--SINTLKDIKDPARDPQYAENEVDEMRIQK 313
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 176 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKLRGVINQLAFGIDKSKSICVD 234
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS I G+ DI L
Sbjct: 235 QNKPLFITAGLDSFGQI-GSPPVPENDIGKL 264
>gi|307193310|gb|EFN76172.1| Cytoplasmic dynein 2 light intermediate chain 1 [Harpegnathos
saltator]
Length = 338
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 146/240 (60%), Gaps = 10/240 (4%)
Query: 32 QSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELG 91
++ ER+++++G+K VGK+T+V+RFLEK + PKPT+A++Y + RK+ K+++K+I H+WE+G
Sbjct: 22 ETHERSIIILGSKGVGKTTMVYRFLEKEERPKPTVAMDYSFGRKTAKSLVKNIVHVWEVG 81
Query: 92 SGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESN---ES 148
S L ++ S + L++MLDLSR LW E L+ R + ++
Sbjct: 82 HLASSLVSVAMTGSTLTHSPHHTVLLMMLDLSRPGELWASLEETLSVIRNGLRMSYDADT 141
Query: 149 VREKRGSFEHFRTADEHRD--KGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYL 206
++E R R +D RD +G + FP+ + ++GG+YD F+ L+ +K + + LR +
Sbjct: 142 IQELR----ERRISDRKRDLERG-VDPFPIRICIVGGRYDEFKELDLGEKELVGKTLRAV 196
Query: 207 AHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 266
AH GASL ++SS D LV+R +D+L H+ F S DY KP+ +P G DS+ I+
Sbjct: 197 AHSLGASLYYYSSKDKILVRRIKDLLAHHGFGSPFTEEKCADYEKPLMMPAGADSLGRID 256
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 90/157 (57%), Gaps = 4/157 (2%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
FP+ + ++GG+YD F+ L+ +K + + LR +AH GASL ++SS D LV+R +D+L
Sbjct: 164 FPIRICIVGGRYDEFKELDLGEKELVGKTLRAVAHSLGASLYYYSSKDKILVRRIKDLLA 223
Query: 778 HYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSS-LDKYKHIFTTHFL 836
H+ F S DY KP+ +P G DS+ I+ Q+ S+ L K I+ + +
Sbjct: 224 HHGFGSPFTEEKCADYEKPLMMPAGADSLGRID--LQFPQNPRPSAILGSVKQIYESRSV 281
Query: 837 QDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQL 873
S+N DP+ D N++EP+ID LR Q+ E++
Sbjct: 282 PQI-SRNDEALLEDPSNDPNFNEPIIDRLRTQREEEI 317
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 384 TTQYVTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETF 443
T + + +I H+WE+G S L ++ S + L++MLDLSR LW E
Sbjct: 66 TAKSLVKNIVHVWEVGHLASSLVSVAMTGSTLTHSPHHTVLLMMLDLSRPGELWASLEET 125
Query: 444 LAKFRAIFESN---ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKG 500
L+ R + ++++E R R +D RD ++G
Sbjct: 126 LSVIRNGLRMSYDADTIQELR----ERRISDRKRDL---------------------ERG 160
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 560
+ FP+ + ++GG+YD F+ L+ +K + + LR +AH GASL ++SS D LV+R +
Sbjct: 161 -VDPFPIRICIVGGRYDEFKELDLGEKELVGKTLRAVAHSLGASLYYYSSKDKILVRRIK 219
Query: 561 DILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 597
D+L H+ F S DY KP+ +P G DS+ I+
Sbjct: 220 DLLAHHGFGSPFTEEKCADYEKPLMMPAGADSLGRID 256
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+ L+ +K + + LR +AH GASL ++SS D LV+R +D+L H+ F S D
Sbjct: 179 KELDLGEKELVGKTLRAVAHSLGASLYYYSSKDKILVRRIKDLLAHHGFGSPFTEEKCAD 238
Query: 365 YNKPIFVPFGTDSVASIE 382
Y KP+ +P G DS+ I+
Sbjct: 239 YEKPLMMPAGADSLGRID 256
>gi|40548413|ref|NP_057092.2| cytoplasmic dynein 2 light intermediate chain 1 isoform 1 [Homo
sapiens]
gi|74715850|sp|Q8TCX1.1|DC2L1_HUMAN RecName: Full=Cytoplasmic dynein 2 light intermediate chain 1;
Short=Dynein 2 light intermediate chain
gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens]
gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c
[Homo sapiens]
Length = 351
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 141/241 (58%), Gaps = 14/241 (5%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+ + IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ + F+LVL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKT 148
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
+ ++V E R + D H D LI FPVPL++IG KYD+F++ E K+++ + LR
Sbjct: 149 NAKAVSEMRQKIWNNMPKD-HPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLR 207
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS
Sbjct: 208 FVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQ 266
Query: 265 I 265
I
Sbjct: 267 I 267
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 114/226 (50%), Gaps = 27/226 (11%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ + F+LVL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLL---QAT 134
Query: 451 FESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIRTFPV 507
+ V K G + + E R K + + P D LI FPV
Sbjct: 135 KSHVDKVIMKLGK-TNAKAVSEMRQKIWNNMPKDHP--------------DHELIDPFPV 179
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
PL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+ + R ++N A
Sbjct: 180 PLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLA 238
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
F + ++ D NKP+F+ G DS I + ++G+ H
Sbjct: 239 FGIDKSKSICVDQNKPLFITAGLDSFGQIGSPP---VPENDIGKLH 281
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS I E + A S L
Sbjct: 229 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 288
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK +L+Q +R
Sbjct: 289 --WKKVYEKLFPPK--SINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKR 338
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS I G+ DI L
Sbjct: 251 QNKPLFITAGLDSFGQI-GSPPVPENDIGKL 280
>gi|449495893|ref|XP_002193487.2| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1
[Taeniopygia guttata]
Length = 355
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 162/282 (57%), Gaps = 18/282 (6%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKP 64
+L D+AI K +P +V ++ E+++L +G K+ GK+T++ R LE+ ++PKP
Sbjct: 7 TLWDLAIAEVE-KRENPDDDDVKPGEVW--EKSVLFMGNKNGGKTTIILRCLEREESPKP 63
Query: 65 TLALEYIYARKSGK-TVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDL 122
TLALEY + R++ + KD+ H WELG GTS +E+ + +S+++ + F +VL+LDL
Sbjct: 64 TLALEYTFGRRARRHNAPKDVAHFWELGGGTSLVELIRIPITSYNIRS---FAVVLVLDL 120
Query: 123 SRLNSLWTEAETFLAKFR--------AIFESNESVREKRGSFEHFRTADEHRDKGLIRTF 174
S+ N LWT E L R + ++N V + +H D L+ F
Sbjct: 121 SKPNELWTTMEKLLQVTRNHVNKILTKLEKTNPEVAAEIKQRMWNNLQRDHPDSALVDPF 180
Query: 175 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 234
P+PL++IG KYD+F + ++I + LR+++H GASL+F S + L+ + R ++NH
Sbjct: 181 PIPLVIIGSKYDIFHEFDSEMRKIISKTLRFVSHYYGASLVFTSKSE-ALLLKARALINH 239
Query: 235 YAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASL 276
AF + +V+ D +KP+F+P G DS++ I G D+ L
Sbjct: 240 LAFGYDKSKSVSVDPSKPLFIPAGLDSMSQI-GPPPASDSDL 280
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 36/215 (16%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFR- 448
D+ H WELG GTS +E+ + +S+++ + F +VL+LDLS+ N LWT E L R
Sbjct: 83 DVAHFWELGGGTSLVELIRIPITSYNIRS---FAVVLVLDLSKPNELWTTMEKLLQVTRN 139
Query: 449 -------AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGL 501
+ ++N V + +H D L+ FP+PL++IG KYD+F +
Sbjct: 140 HVNKILTKLEKTNPEVAAEIKQRMWNNLQRDHPDSALVDPFPIPLVIIGSKYDIFHE--- 196
Query: 502 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 561
+ ++I + LR+++H GASL+F S + L+ + R
Sbjct: 197 --------------------FDSEMRKIISKTLRFVSHYYGASLVFTSKSE-ALLLKARA 235
Query: 562 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
++NH AF + +V+ D +KP+F+P G DS++ I
Sbjct: 236 LINHLAFGYDKSKSVSVDPSKPLFIPAGLDSMSQI 270
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 21/179 (11%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D L+ FP+PL++IG KYD+F + ++I + LR+++H GASL+F S + L+
Sbjct: 173 DSALVDPFPIPLVIIGSKYDIFHEFDSEMRKIISKTLRFVSHYYGASLVFTSKSE-ALLL 231
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI----EGTTQYVTAGSTSSLDK 826
+ R ++NH AF + +V+ D +KP+F+P G DS++ I + + + L+
Sbjct: 232 KARALINHLAFGYDKSKSVSVDPSKPLFIPAGLDSMSQIGPPPASDSDLGKLRANTPLEL 291
Query: 827 YKHIFTTHF-------LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K +F F LQD DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 292 WKKVFEKTFPPKSFCDLQD---------TKDPAQDSQYAEYEVDVMRAQKNQELEQYKR 341
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 312 KRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFV 371
++I + LR+++H GASL+F S + L+ + R ++NH AF + +V+ D +KP+F+
Sbjct: 202 RKIISKTLRFVSHYYGASLVFTSKSE-ALLLKARALINHLAFGYDKSKSVSVDPSKPLFI 260
Query: 372 PFGTDSVASI 381
P G DS++ I
Sbjct: 261 PAGLDSMSQI 270
>gi|73969477|ref|XP_851613.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1 isoform
2 [Canis lupus familiaris]
Length = 348
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 158/268 (58%), Gaps = 26/268 (9%)
Query: 19 PSPSSSEVHKIDIQSQ----------ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLAL 68
PS + E+ K +++ + E+++ IG+K+ GK+T++ R L++++ PKPTLAL
Sbjct: 2 PSETLWEIAKAEVEKRGSEGDGLEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLAL 61
Query: 69 EYIYARKS-GKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLN 126
EY Y R++ G + KDI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N
Sbjct: 62 EYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRT---FSIVLVLDLSKPN 118
Query: 127 SLWTEAETFLAKFRAIFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVP 177
LW E L ++ + ++++V E R D H D+ L+ F +P
Sbjct: 119 DLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKD-HPDRELVDPFLIP 177
Query: 178 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 237
L++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 178 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKVRGVINQLAF 236
Query: 238 SSHLASAVNFDYNKPIFVPFGTDSVASI 265
+ ++ D NKP+F+ G DS++ I
Sbjct: 237 GIDKSKSICVDQNKPLFITAGLDSLSQI 264
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 41/236 (17%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 74 IPKDIAHFWELGGGTSLLDLISIPITSDNLRT---FSIVLVLDLSKPNDLWPTMENLLQA 130
Query: 447 FRAIFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
++ + ++++V E R D H D+ L+ F +PL++IG KYD+F+
Sbjct: 131 TKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKD-HPDRELVDPFLIPLVIIGSKYDIFQ 189
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
D + K+++ + LR++AH GASL+F S + L+
Sbjct: 190 D-----------------------FDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 225
Query: 558 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+ R ++N AF + ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 226 KVRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPP---IPDNDIGKLH 278
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ L+ F +PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 167 DRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 225
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS++ I + S +D
Sbjct: 226 KVRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDL 285
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 286 WKKVYERVFPPK--STNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKR 335
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 189 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKVRGVINQLAFGIDKSKSICVD 247
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS++ I G+ DI L
Sbjct: 248 QNKPLFITAGLDSLSQI-GSPPIPDNDIGKL 277
>gi|327278685|ref|XP_003224091.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Anolis carolinensis]
Length = 353
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 149/267 (55%), Gaps = 12/267 (4%)
Query: 8 DIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLA 67
D ++A + S E + ++ ER+L +G K+ GK+T++ R L++++ PKPTLA
Sbjct: 6 DTIWDIAKAEVEKRESHEGDRDGLECWERSLFFLGNKNGGKTTIILRCLDRDEIPKPTLA 65
Query: 68 LEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLN 126
LEY + R++ G KDI + WELG GTS +++ + + F +VL+LDLS+ N
Sbjct: 66 LEYTFGRRAKGHNTPKDIANFWELGGGTSLMDLIPI--PITTANIRTFAVVLVLDLSKPN 123
Query: 127 SLWTEAETFLAKFRA--------IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPL 178
LW E+ L R + ++N + +H D+ LI FP+PL
Sbjct: 124 ELWPTMESLLHVTRKHVDRVITKLGQTNPKAATEIKQKMWNNLPKDHPDRELIDPFPIPL 183
Query: 179 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 238
++IG KYD+F + K+I + LR+++H GASL+F S + L+ +TR ++NH AF
Sbjct: 184 VVIGSKYDMFHEFDSEMKKIICKTLRFVSHYYGASLVFTSKSE-ALLLKTRTLINHLAFG 242
Query: 239 SHLASAVNFDYNKPIFVPFGTDSVASI 265
+++ D NKP+F+P G DS++ I
Sbjct: 243 FDRGKSMSLDQNKPLFIPAGMDSLSQI 269
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F + K+I + LR+++H GASL+F S + L+
Sbjct: 172 DRELIDPFPIPLVVIGSKYDMFHEFDSEMKKIICKTLRFVSHYYGASLVFTSKSE-ALLL 230
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI----EGTTQYVTAGSTSSLDK 826
+TR ++NH AF +++ D NKP+F+P G DS++ I + + S +D
Sbjct: 231 KTRTLINHLAFGFDRGKSMSLDQNKPLFIPAGMDSLSQIGPPPAADSDIGKLHAQSPVDL 290
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K +F F S K DPA D Y+E +D +R QK ++L+Q ++
Sbjct: 291 WKKVFEKAFPPK--SVGVFKEVSDPAQDPQYAEYEVDVMRGQKNQELEQYKK 340
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 37/231 (16%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA- 449
DI + WELG GTS +++ + + F +VL+LDLS+ N LW E+ L R
Sbjct: 82 DIANFWELGGGTSLMDLIPI--PITTANIRTFAVVLVLDLSKPNELWPTMESLLHVTRKH 139
Query: 450 -------IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLI 502
+ ++N + +H D+ LI FP+PL++IG KYD+F +
Sbjct: 140 VDRVITKLGQTNPKAATEIKQKMWNNLPKDHPDRELIDPFPIPLVVIGSKYDMFHE---- 195
Query: 503 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 562
+ K+I + LR+++H GASL+F S + L+ +TR +
Sbjct: 196 -------------------FDSEMKKIICKTLRFVSHYYGASLVFTSKSE-ALLLKTRTL 235
Query: 563 LNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+NH AF +++ D NKP+F+P G DS++ I AD+++G+ H
Sbjct: 236 INHLAFGFDRGKSMSLDQNKPLFIPAGMDSLSQIGPPP---AADSDIGKLH 283
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 312 KRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFV 371
K+I + LR+++H GASL+F S + L+ +TR ++NH AF +++ D NKP+F+
Sbjct: 201 KKIICKTLRFVSHYYGASLVFTSKSE-ALLLKTRTLINHLAFGFDRGKSMSLDQNKPLFI 259
Query: 372 PFGTDSVASIEGTTQYVTADICHL 395
P G DS++ I G +DI L
Sbjct: 260 PAGMDSLSQI-GPPPAADSDIGKL 282
>gi|417399471|gb|JAA46739.1| Hypothetical protein [Desmodus rotundus]
Length = 351
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 148/245 (60%), Gaps = 14/245 (5%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWE 89
++ E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WE
Sbjct: 27 VEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWE 86
Query: 90 LGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNES 148
LG GTS L++ S+ +S +L F++VL+LDLS+ N LW E + ++ + +
Sbjct: 87 LGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLMRATKSHVDKAIT 143
Query: 149 ----VREKRGSFEHFRT----ADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAV 200
K S RT +H D+ LI FP+PL++IG KYD+F++ + K+++
Sbjct: 144 KLGKTDSKAASEMRQRTWSNLEKDHPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVIC 203
Query: 201 QCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTD 260
+ LR++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G D
Sbjct: 204 KTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIGKSKSICVDQNKPLFITAGLD 262
Query: 261 SVASI 265
S++ I
Sbjct: 263 SLSHI 267
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 29/230 (12%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E + RA
Sbjct: 80 DIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLM---RA 133
Query: 450 IFESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+ K G + + A E R + L + P D+ LI FP
Sbjct: 134 TKSHVDKAITKLGKTDS-KAASEMRQRTWSNLEKDHP--------------DRELIDPFP 178
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 179 IPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 237
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKHLTT 616
AF + ++ D NKP+F+ G DS++ I D ++G+ H T
Sbjct: 238 AFGIGKSKSICVDQNKPLFITAGLDSLSHIGSPP---VPDNDIGKFHART 284
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 99/173 (57%), Gaps = 9/173 (5%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAG-----STSSLD 825
+ R ++N AF + ++ D NKP+F+ G DS++ I G+ + + ++
Sbjct: 229 KIRGVINQLAFGIGKSKSICVDQNKPLFITAGLDSLSHI-GSPPVPDNDIGKFHARTPME 287
Query: 826 KYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 288 LWKKVYEKLFPPK--STNTLKDIKDPAKDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIGKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS++ I
Sbjct: 251 QNKPLFITAGLDSLSHI 267
>gi|440892365|gb|ELR45587.1| Cytoplasmic dynein 2 light intermediate chain 1, partial [Bos
grunniens mutus]
Length = 350
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 156/266 (58%), Gaps = 17/266 (6%)
Query: 12 ELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVG-KSTLVFRFLEKNDTPKPTLALEY 70
E+A + SSE + E+++ IG+K+ G K+T++ R L++++ PKPTLALEY
Sbjct: 6 EIAKAEVEKRGSSENEGDGAEIGEKSVFFIGSKNGGGKTTIILRCLDRDEPPKPTLALEY 65
Query: 71 IYARKS-GKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSL 128
Y R++ G + KDI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N L
Sbjct: 66 TYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDL 122
Query: 129 WTEAETFLAKFRAIFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLI 179
W E L + + ++++ E R D H D+ L+ FP+PL+
Sbjct: 123 WPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKD-HPDRELLDPFPIPLV 181
Query: 180 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 239
+IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 182 IIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGI 240
Query: 240 HLASAVNFDYNKPIFVPFGTDSVASI 265
+ + ++ D NKP+F+ G DS++ I
Sbjct: 241 NKSKSICVDQNKPLFITAGLDSLSQI 266
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 125/230 (54%), Gaps = 29/230 (12%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 76 IPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLL-- 130
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIR 503
+A + + V K G ++ + A E R K + + P D+ L+
Sbjct: 131 -QATKLNIDKVIMKLGK-KNSKAASEMRQKMWSNMQKDHP--------------DRELLD 174
Query: 504 TFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDIL 563
FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++
Sbjct: 175 PFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVI 233
Query: 564 NHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
N AF + + ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 234 NQLAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPP---LPDNDIGKLH 280
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ L+ FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 169 DRELLDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 227
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + + ++ D NKP+F+ G DS++ I + S +D
Sbjct: 228 KIRGVINQLAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDL 287
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 288 WKKVYEKLFPPK--SINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKR 337
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + + ++ D
Sbjct: 191 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGINKSKSICVD 249
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS++ I
Sbjct: 250 QNKPLFITAGLDSLSQI 266
>gi|345312256|ref|XP_001513530.2| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like,
partial [Ornithorhynchus anatinus]
Length = 340
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 142/238 (59%), Gaps = 12/238 (5%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ +G+K+ GK+T++ R L++++ +PTLALEY + R++ G KDI H WELG G
Sbjct: 24 EKSVFFVGSKNGGKTTIILRCLDRDEPARPTLALEYTFGRRARGHNTPKDIAHFWELGGG 83
Query: 94 TSRLEVASLFSSFSLTAQS--GFTLVLMLDLSRLNSLWTEAETFLAKFRAIFES--NESV 149
TS L++A + +TA S F + LDLSR + LW AE L R E+
Sbjct: 84 TSLLDLARI----PITADSLRTFATDIFLDLSRPSELWLTAEHLLRAVRTHVENLGQPGT 139
Query: 150 REKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHV 209
R ++H D+ I FP+PL++IG KYD+F+NL+ K+++ + LR+LAH
Sbjct: 140 RAAATPRTWSPVPEDHPDREFIDPFPIPLVIIGSKYDVFQNLDSEKRKVICRTLRFLAHH 199
Query: 210 NGASLLFHSSLDPGLVKRTRDILNHYAFSSHL--ASAVNFDYNKPIFVPFGTDSVASI 265
+GA+L+F + L+ +TR +++H AF + + A+ D NKP+F+P G DS + I
Sbjct: 200 HGATLMFTGKSE-ALLLKTRSVISHLAFGVGVDRSKALTLDQNKPLFIPAGLDSFSQI 256
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 117/211 (55%), Gaps = 32/211 (15%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQS--GFTLVLMLDLSRLNSLWTEAETFLAKFR 448
DI H WELG GTS L++A + +TA S F + LDLSR + LW AE L R
Sbjct: 73 DIAHFWELGGGTSLLDLARI----PITADSLRTFATDIFLDLSRPSELWLTAEHLL---R 125
Query: 449 AIFESNESVREKRGSFEHFRTADEHRDKGLIRTF-PVPLILIGGKYDLFEDKGLIRTFPV 507
A+ E++ + G+ R RT+ PVP + D+ I FP+
Sbjct: 126 AVRTHVENLGQP-GT----------RAAATPRTWSPVP--------EDHPDREFIDPFPI 166
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
PL++IG KYD+F+NL+ K+++ + LR+LAH +GA+L+F + L+ +TR +++H A
Sbjct: 167 PLVIIGSKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFTGKSE-ALLLKTRSVISHLA 225
Query: 568 FSSHL--ASAVNFDYNKPIFVPFGTDSVASI 596
F + + A+ D NKP+F+P G DS + I
Sbjct: 226 FGVGVDRSKALTLDQNKPLFIPAGLDSFSQI 256
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 103/178 (57%), Gaps = 17/178 (9%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ I FP+PL++IG KYD+F+NL+ K+++ + LR+LAH +GA+L+F + L+
Sbjct: 157 DREFIDPFPIPLVIIGSKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFTGKSE-ALLL 215
Query: 771 RTRDILNHYAFSSHL--ASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGS------TS 822
+TR +++H AF + + A+ D NKP+F+P G DS + I AG +
Sbjct: 216 KTRSVISHLAFGVGVDRSKALTLDQNKPLFIPAGLDSFSQIGPPPS--AAGDIGKLRVQT 273
Query: 823 SLDKYKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
L+ +K ++ F P Q KS K DP D Y+E +D++R QK ++L+Q +R
Sbjct: 274 PLELWKEVYNKAF----PLQTKSDRKDLKDPGRDPQYAEREVDAMRAQKDQELEQYKR 327
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL--ASAVN 362
+NL+ K+++ + LR+LAH +GA+L+F + L+ +TR +++H AF + + A+
Sbjct: 179 QNLDSEKRKVICRTLRFLAHHHGATLMFTGKSE-ALLLKTRSVISHLAFGVGVDRSKALT 237
Query: 363 FDYNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
D NKP+F+P G DS + I G DI L
Sbjct: 238 LDQNKPLFIPAGLDSFSQI-GPPPSAAGDIGKL 269
>gi|281352618|gb|EFB28202.1| hypothetical protein PANDA_000192 [Ailuropoda melanoleuca]
Length = 329
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 147/242 (60%), Gaps = 16/242 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 30 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRARGHNRPKDIAHFWELGGG 89
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE-------- 144
TS L++ S+ +S +L F++VL+LDLS+ N LW E L ++ +
Sbjct: 90 TSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQATKSHIDKMIMKLGK 146
Query: 145 -SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
++++V E R D H D+ L+ F +PL++IG KYD+F++ + K+++ + L
Sbjct: 147 TNSKAVSEMRQKIWSNMQKD-HPDRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVMCKTL 205
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS++
Sbjct: 206 RFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLS 264
Query: 264 SI 265
I
Sbjct: 265 QI 266
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 20/207 (9%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L ++
Sbjct: 79 DIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQATKS 135
Query: 450 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPL 509
+ K S + E R K I + D D+ L+ F +PL
Sbjct: 136 HIDKMIMKLGKTNS----KAVSEMRQK----------IWSNMQKD-HPDRELVDPFLIPL 180
Query: 510 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 569
++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 181 VIIGSKYDIFQDFDSEKRKVMCKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFG 239
Query: 570 SHLASAVNFDYNKPIFVPFGTDSVASI 596
+ ++ D NKP+F+ G DS++ I
Sbjct: 240 IDKSKSICVDQNKPLFITAGLDSLSQI 266
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ L+ F +PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 169 DRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVMCKTLRFVAHYYGASLMFTSKSE-ALLL 227
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEG----TTQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS++ I + S ++
Sbjct: 228 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPNNDIGKLHARSPMEL 287
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQK 869
+K ++ F S N K DPA D Y+E +D +R QK
Sbjct: 288 WKKVYERVFPPK--SMNTLKDTKDPARDPQYAESEVDEMRIQK 328
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 191 QDFDSEKRKVMCKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 249
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS++ I G+ DI L
Sbjct: 250 QNKPLFITAGLDSLSQI-GSPPVPNNDIGKL 279
>gi|301753208|ref|XP_002912480.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Ailuropoda melanoleuca]
Length = 376
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 147/242 (60%), Gaps = 16/242 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 56 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRARGHNRPKDIAHFWELGGG 115
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE-------- 144
TS L++ S+ +S +L F++VL+LDLS+ N LW E L ++ +
Sbjct: 116 TSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQATKSHIDKMIMKLGK 172
Query: 145 -SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
++++V E R D H D+ L+ F +PL++IG KYD+F++ + K+++ + L
Sbjct: 173 TNSKAVSEMRQKIWSNMQKD-HPDRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVMCKTL 231
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS++
Sbjct: 232 RFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLS 290
Query: 264 SI 265
I
Sbjct: 291 QI 292
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 20/207 (9%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L ++
Sbjct: 105 DIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQATKS 161
Query: 450 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPL 509
+ K S + E R K I + D D+ L+ F +PL
Sbjct: 162 HIDKMIMKLGKTNS----KAVSEMRQK----------IWSNMQKD-HPDRELVDPFLIPL 206
Query: 510 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 569
++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 207 VIIGSKYDIFQDFDSEKRKVMCKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFG 265
Query: 570 SHLASAVNFDYNKPIFVPFGTDSVASI 596
+ ++ D NKP+F+ G DS++ I
Sbjct: 266 IDKSKSICVDQNKPLFITAGLDSLSQI 292
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ L+ F +PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 195 DRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVMCKTLRFVAHYYGASLMFTSKSE-ALLL 253
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEG----TTQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS++ I + S ++
Sbjct: 254 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPNNDIGKLHARSPMEL 313
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 314 WKKVYERVF--PPKSMNTLKDTKDPARDPQYAESEVDEMRIQKDQELEQYKR 363
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+K R ++N AF + ++ D
Sbjct: 217 QDFDSEKRKVMCKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKSKSICVD 275
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS++ I G+ DI L
Sbjct: 276 QNKPLFITAGLDSLSQI-GSPPVPNNDIGKL 305
>gi|351694879|gb|EHA97797.1| Cytoplasmic dynein 2 light intermediate chain 1, partial
[Heterocephalus glaber]
Length = 349
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 145/242 (59%), Gaps = 16/242 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
++++ IG+K+ GK+T++ R L++++ KPTLALEY Y R++ G KDI H WELG G
Sbjct: 29 DKSVFFIGSKNGGKTTIILRCLDRDEPAKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 88
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE-------- 144
TS L++ S+ +S +L F++VL+LDLS+ N LW E L R+ +
Sbjct: 89 TSLLDLISIPITSDTLRT---FSIVLILDLSKPNDLWPTMENLLQATRSHVDKVIMKLGR 145
Query: 145 -SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
++++ E R + +H D+ LI FP+PL++IG KYD+F++ + K++ + L
Sbjct: 146 TNSKAASEMRQKIWS-KMQKDHPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKAICKTL 204
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS+
Sbjct: 205 RFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLC 263
Query: 264 SI 265
I
Sbjct: 264 QI 265
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 23/224 (10%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L R+
Sbjct: 78 DIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLILDLSKPNDLWPTMENLLQATRS 134
Query: 450 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPL 509
+ V K G + + A E R K I + D D+ LI FP+PL
Sbjct: 135 HVDK---VIMKLGR-TNSKAASEMRQK----------IWSKMQKD-HPDRELIDPFPIPL 179
Query: 510 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 569
++IG KYD+F++ + K++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 180 VIIGSKYDIFQDFDSEKRKAICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFG 238
Query: 570 SHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+ ++ D NKP+F+ G DS+ I D ++G+ H
Sbjct: 239 IDKSKSICVDQNKPLFITAGLDSLCQIGPPP---VPDNDIGKFH 279
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 96/173 (55%), Gaps = 9/173 (5%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ + K++ + LR++AH GASL+F S + L+
Sbjct: 168 DRELIDPFPIPLVIIGSKYDIFQDFDSEKRKAICKTLRFVAHYYGASLMFTSKSE-ALLL 226
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS+ I + S ++
Sbjct: 227 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGPPPVPDNDIGKFHAHSPMEL 286
Query: 827 YKHIFTTHFLQDDPSQ-NKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F P + + K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 287 WKKVYEKLF---PPKRIDTLKDVKDPARDPQYAESEVDEMRIQKDQELEQYKR 336
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 190 QDFDSEKRKAICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 248
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS+ I
Sbjct: 249 QNKPLFITAGLDSLCQI 265
>gi|348501594|ref|XP_003438354.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Oreochromis niloticus]
Length = 358
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 142/241 (58%), Gaps = 12/241 (4%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
ERT+LL+G+K+ GK++++ R L++++ KPTLALEY + R++ G KDI HLWELG G
Sbjct: 36 ERTVLLMGSKAGGKTSILLRCLDRDELSKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 95
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNES-VREK 152
TS ++ + + + S +++L+LDLS+ N+LW E L +A E S V++
Sbjct: 96 TSLSDLVQI--PITPVSISCLSVILVLDLSKPNALWGTMEKLLQAAQAHLERTSSQVQKS 153
Query: 153 RGSFEHFRTA--------DEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
+ +H + ++ D+ LI FPVPL++IG KYD+F+ + +KK++ + LR
Sbjct: 154 KPGVKHQTPSHSAARVLPKDYPDRELISPFPVPLLIIGSKYDIFQEFDSDKKKVVSKTLR 213
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH ASL+F S L+ +T+ H AF V+ D KP+ +P G+DS
Sbjct: 214 FIAHYYAASLVFTSIKSESLISKTKSFFLHLAFGLERGKTVSSDPLKPLIIPAGSDSFGQ 273
Query: 265 I 265
I
Sbjct: 274 I 274
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 17/216 (7%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI HLWELG GTS ++ + + + S +++L+LDLS+ N+LW E L +A
Sbjct: 85 DIAHLWELGGGTSLSDLVQI--PITPVSISCLSVILVLDLSKPNALWGTMEKLLQAAQAH 142
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
E S +K +T + L + +P D+ LI FPVPL+
Sbjct: 143 LERTSSQVQKSKPGVKHQTPSHSAARVLPKDYP--------------DRELISPFPVPLL 188
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
+IG KYD+F+ + +KK++ + LR++AH ASL+F S L+ +T+ H AF
Sbjct: 189 IIGSKYDIFQEFDSDKKKVVSKTLRFIAHYYAASLVFTSIKSESLISKTKSFFLHLAFGL 248
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAD 606
V+ D KP+ +P G+DS I G+ V D
Sbjct: 249 ERGKTVSSDPLKPLIIPAGSDSFGQI-GSPPTVDVD 283
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 8/175 (4%)
Query: 709 FEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGL 768
+ D+ LI FPVPL++IG KYD+F+ + +KK++ + LR++AH ASL+F S L
Sbjct: 174 YPDRELISPFPVPLLIIGSKYDIFQEFDSDKKKVVSKTLRFIAHYYAASLVFTSIKSESL 233
Query: 769 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTS-----S 823
+ +T+ H AF V+ D KP+ +P G+DS I G+ V TS
Sbjct: 234 ISKTKSFFLHLAFGLERGKTVSSDPLKPLIIPAGSDSFGQI-GSPPTVDVDITSLHAKNP 292
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
D +K ++ F + S ++ + DPA D YSEP ID++R QK ++L+Q +R
Sbjct: 293 KDLWKKVYERVFPPE--STSEQRELKDPAKDPQYSEPQIDAMRAQKDQELEQYKR 345
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+ + +KK++ + LR++AH ASL+F S L+ +T+ H AF V+ D
Sbjct: 198 QEFDSDKKKVVSKTLRFIAHYYAASLVFTSIKSESLISKTKSFFLHLAFGLERGKTVSSD 257
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
KP+ +P G+DS I G+ V DI L
Sbjct: 258 PLKPLIIPAGSDSFGQI-GSPPTVDVDITSL 287
>gi|332021706|gb|EGI62062.1| Cytoplasmic dynein 2 light intermediate chain 1 [Acromyrmex
echinatior]
Length = 336
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 148/247 (59%), Gaps = 13/247 (5%)
Query: 27 HKIDI-QSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDIC 85
KID ++ ER+++++G+K VGK+T+V+RFLEK++ PKPT+A++Y + RK+ K+++K+I
Sbjct: 16 RKIDPNETHERSIIILGSKGVGKTTMVYRFLEKDERPKPTIAMDYSFGRKTVKSLVKNIV 75
Query: 86 HLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWT---EAETFLAKFRAI 142
H+WE+G S L ++ S + L++MLDLSR LW+ EA + + +
Sbjct: 76 HVWEVGYLASSLVSVAMTGSTLTHSPHHTVLLIMLDLSRPEELWSSFEEALSVIQNGSKM 135
Query: 143 FESNESVREKRGSFEHFRTADEHRDKGLIR---TFPVPLILIGGKYDLFENLEPNKKRIA 199
+ +++E R R AD R K L R F + + +IGG+YD F+ + NKK
Sbjct: 136 SYNTNTIQELRDK----RAAD--RKKELERGVDPFFMKICIIGGRYDEFKEFDSNKKEFI 189
Query: 200 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 259
+ LR +AH GASL ++SS D LV+R +D+L+HY F S DY KP+ +P G
Sbjct: 190 GKILRAIAHNLGASLYYYSSKDKFLVRRLKDLLSHYGFGSSFMEDKCTDYEKPLMMPAGM 249
Query: 260 DSVASIE 266
DS I+
Sbjct: 250 DSFGRID 256
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 4/156 (2%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
F + + +IGG+YD F+ + NKK + LR +AH GASL ++SS D LV+R +D+L+
Sbjct: 164 FFMKICIIGGRYDEFKEFDSNKKEFIGKILRAIAHNLGASLYYYSSKDKFLVRRLKDLLS 223
Query: 778 HYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQ 837
HY F S DY KP+ +P G DS I+ Q+ ++ LD K I+ + Q
Sbjct: 224 HYGFGSSFMEDKCTDYEKPLMMPAGMDSFGRID--LQFPQTRPSAILDTIKQIYVSRIPQ 281
Query: 838 DDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQL 873
S++ + DP+ D N++EP+ID LR Q+ E++
Sbjct: 282 --VSRSDESTLEDPSNDPNFNEPIIDRLRMQREEEI 315
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 29/217 (13%)
Query: 384 TTQYVTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWT---EA 440
T + + +I H+WE+G S L ++ S + L++MLDLSR LW+ EA
Sbjct: 66 TVKSLVKNIVHVWEVGYLASSLVSVAMTGSTLTHSPHHTVLLIMLDLSRPEELWSSFEEA 125
Query: 441 ETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKG 500
+ + + + +++E R R AD R K L R
Sbjct: 126 LSVIQNGSKMSYNTNTIQELRDK----RAAD--RKKELERG------------------- 160
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 560
+ F + + +IGG+YD F+ + NKK + LR +AH GASL ++SS D LV+R +
Sbjct: 161 -VDPFFMKICIIGGRYDEFKEFDSNKKEFIGKILRAIAHNLGASLYYYSSKDKFLVRRLK 219
Query: 561 DILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 597
D+L+HY F S DY KP+ +P G DS I+
Sbjct: 220 DLLSHYGFGSSFMEDKCTDYEKPLMMPAGMDSFGRID 256
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+ + NKK + LR +AH GASL ++SS D LV+R +D+L+HY F S D
Sbjct: 179 KEFDSNKKEFIGKILRAIAHNLGASLYYYSSKDKFLVRRLKDLLSHYGFGSSFMEDKCTD 238
Query: 365 YNKPIFVPFGTDSVASIE 382
Y KP+ +P G DS I+
Sbjct: 239 YEKPLMMPAGMDSFGRID 256
>gi|410954703|ref|XP_003984001.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1 [Felis
catus]
Length = 399
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 143/240 (59%), Gaps = 14/240 (5%)
Query: 36 RTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSGT 94
+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G + KDI H WELG GT
Sbjct: 80 KSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRTKGHNIPKDIAHFWELGGGT 139
Query: 95 SRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFR--------AIFES 145
S L++ S+ +S +L F++VL+LDLS+ N LW E L + + ++
Sbjct: 140 SLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQAMKNHVDKMIMKLGKT 196
Query: 146 NESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRY 205
N + +H D+ L+ F +PL++IG KYD+F++ + K+++ + LR+
Sbjct: 197 NSKAASEMRQRIWSNMQKDHPDRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTLRF 256
Query: 206 LAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
+AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G DS++ I
Sbjct: 257 VAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDRSKSICVDQNKPLFITAGLDSLSQI 315
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 122/227 (53%), Gaps = 23/227 (10%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 125 IPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLL-- 179
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+A+ + + K G + + A E R + I + D D+ L+ F
Sbjct: 180 -QAMKNHVDKMIMKLGK-TNSKAASEMRQR----------IWSNMQKD-HPDRELVDPFL 226
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 227 IPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 285
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
AF + ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 286 AFGIDRSKSICVDQNKPLFITAGLDSLSQIGSPP---VPDNDIGKLH 329
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ L+ F +PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 218 DRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 276
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS++ I + S ++
Sbjct: 277 KIRGVINQLAFGIDRSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMEL 336
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 337 WKKVYERVF--PPKSINTLKDTKDPAKDPQYAEREVDEMRMQKDQELEQYKR 386
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 240 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDRSKSICVD 298
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS++ I G+ DI L
Sbjct: 299 QNKPLFITAGLDSLSQI-GSPPVPDNDIGKL 328
>gi|363731788|ref|XP_419456.3| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1 [Gallus
gallus]
Length = 354
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 143/245 (58%), Gaps = 14/245 (5%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGK-TVMKDICHLWE 89
++ E+++L +G+K+ GK+T++ R LE+ + PKPTL LEY + R++ + KDI H WE
Sbjct: 29 VEVCEKSVLFMGSKNGGKTTIILRCLEREEVPKPTLVLEYTFGRRARRHNAPKDIAHFWE 88
Query: 90 LGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFR-------AI 142
+G GTS LE+ + ++ F +VL+LDLS+ N LW E L R A
Sbjct: 89 IGGGTSLLELIRI--PITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNHVNKILAK 146
Query: 143 FESN--ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAV 200
E E E + ++ D H D L+ FP+PL++IG KYD+F + ++I
Sbjct: 147 LEKTDPEVAAEIKQKMQNNLQRD-HPDYDLVDPFPIPLVIIGSKYDIFHEFDSEMRKIIS 205
Query: 201 QCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTD 260
+ LR+++H GASL+F S + L+ + R ++NH AF + +V+ D++KP+F+P G D
Sbjct: 206 RTLRFVSHYYGASLVFTSKSE-ALLLKARALINHLAFGYDRSKSVSVDHSKPLFIPAGLD 264
Query: 261 SVASI 265
S++ I
Sbjct: 265 SLSQI 269
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 113/226 (50%), Gaps = 21/226 (9%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WE+G GTS LE+ + ++ F +VL+LDLS+ N LW E L R
Sbjct: 82 DIAHFWEIGGGTSLLELIRI--PITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNH 139
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
+ EK E + L R P D L+ FP+PL+
Sbjct: 140 VNKILAKLEKTDP-EVAAEIKQKMQNNLQRDHP--------------DYDLVDPFPIPLV 184
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
+IG KYD+F + ++I + LR+++H GASL+F S + L+ + R ++NH AF
Sbjct: 185 IIGSKYDIFHEFDSEMRKIISRTLRFVSHYYGASLVFTSKSE-ALLLKARALINHLAFGY 243
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKHLTT 616
+ +V+ D++KP+F+P G DS++ I T+D+ +G+ T
Sbjct: 244 DRSKSVSVDHSKPLFIPAGLDSLSQIGPPP---TSDSNIGKMRANT 286
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D L+ FP+PL++IG KYD+F + ++I + LR+++H GASL+F S + L+
Sbjct: 172 DYDLVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRFVSHYYGASLVFTSKSE-ALLL 230
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI----EGTTQYVTAGSTSSLDK 826
+ R ++NH AF + +V+ D++KP+F+P G DS++ I + + + L+
Sbjct: 231 KARALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQIGPPPTSDSNIGKMRANTPLEL 290
Query: 827 YKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K +F F P ++ S + + DPA Y+E +D +R QK ++ +Q +R
Sbjct: 291 WKKVFEKTF----PPRSFSDLQDSKDPAQVSQYAEYEVDVMRAQKNQEFEQYKR 340
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 312 KRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFV 371
++I + LR+++H GASL+F S + L+ + R ++NH AF + +V+ D++KP+F+
Sbjct: 201 RKIISRTLRFVSHYYGASLVFTSKSE-ALLLKARALINHLAFGYDRSKSVSVDHSKPLFI 259
Query: 372 PFGTDSVASI 381
P G DS++ I
Sbjct: 260 PAGLDSLSQI 269
>gi|395731878|ref|XP_002812126.2| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
isoform 2, partial [Pongo abelii]
Length = 292
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 137/229 (59%), Gaps = 14/229 (6%)
Query: 47 GKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSS 105
GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG GTS L++ S+
Sbjct: 1 GKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISI-PI 59
Query: 106 FSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---------SNESVREKRGSF 156
S T ++ F+LVL+LDLS+ N LW E L ++ + + ++V E R
Sbjct: 60 ISDTLRT-FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVLMKLGKTNPKAVSEMRQKI 118
Query: 157 EHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLF 216
+ D H D+ LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F
Sbjct: 119 WNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMF 177
Query: 217 HSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
S + L+ + R ++N AF + ++ D NKP+F+ G DS I
Sbjct: 178 TSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQI 225
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 116/232 (50%), Gaps = 39/232 (16%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ S T ++ F+LVL+LDLS+ N LW E L ++
Sbjct: 38 DIAHFWELGGGTSLLDLISI-PIISDTLRT-FSLVLVLDLSKPNDLWPTMENLLQATKSH 95
Query: 451 FE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGL 501
+ + ++V E R + D H D+ LI FPVPL++IG KYD+F+D
Sbjct: 96 VDKVLMKLGKTNPKAVSEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQD--- 151
Query: 502 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 561
E K+++ + LR++AH GASL+F S + L+ + R
Sbjct: 152 --------------------FESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRG 190
Query: 562 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
++N AF + ++ D NKP+F+ G DS I + ++G+ H
Sbjct: 191 VINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPP---VPENDIGKLH 239
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 128 DRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 186
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS I E + A S L
Sbjct: 187 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 246
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQL 873
+K ++ F S N K DPA D Y+E +D +R QK + L
Sbjct: 247 --WKKVYEKLFPPK--SINTLKDIKDPARDPQYAESEVDEMRIQKDQVL 291
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 150 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 208
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS I G+ DI L
Sbjct: 209 QNKPLFITAGLDSFGQI-GSPPVPENDIGKL 238
>gi|344288829|ref|XP_003416149.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Loxodonta africana]
Length = 351
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 148/246 (60%), Gaps = 16/246 (6%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWE 89
++ E+++ IG+K+ GK+T++ R L++++ P+PTLALEY Y R++ G K I H WE
Sbjct: 27 VEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPRPTLALEYTYGRRAKGHNTPKHIAHFWE 86
Query: 90 LGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---- 144
LG GTS L++ ++ +S +L F++VL+LDLS+ N LW E+ L ++ +
Sbjct: 87 LGGGTSLLDLITIPITSDTLRT---FSVVLVLDLSKPNDLWPTMESLLHVTKSHVDKVIM 143
Query: 145 -----SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIA 199
++++ E R D H D+ LI FP+PL++IG KYD+F++ + K++I
Sbjct: 144 KLGKTNSKAASEMRQKIWSNLQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKII 202
Query: 200 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 259
+ LR++AH GASL+F S + L+ + R ++N AF ++ D NKP+F+ G
Sbjct: 203 CKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKGKSMCVDQNKPLFITAGL 261
Query: 260 DSVASI 265
DS++ I
Sbjct: 262 DSLSQI 267
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 26/209 (12%)
Query: 392 ICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
I H WELG GTS L++ ++ +S +L F++VL+LDLS+ N LW E+ L ++
Sbjct: 81 IAHFWELGGGTSLLDLITIPITSDTLRT---FSVVLVLDLSKPNDLWPTMESLLHVTKSH 137
Query: 451 FESNESVREKRGSFEHFRTADEHRDK---GLIRTFPVPLILIGGKYDLFEDKGLIRTFPV 507
+ V K G + + A E R K L + P D+ LI FP+
Sbjct: 138 VDK---VIMKLGK-TNSKAASEMRQKIWSNLQKDHP--------------DRELIDPFPI 179
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
PL++IG KYD+F++ + K++I + LR++AH GASL+F S + L+ + R ++N A
Sbjct: 180 PLVIIGSKYDIFQDFDSEKRKIICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLA 238
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASI 596
F ++ D NKP+F+ G DS++ I
Sbjct: 239 FGIDKGKSMCVDQNKPLFITAGLDSLSQI 267
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ + K++I + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF ++ D NKP+F+ G DS++ I + S ++
Sbjct: 229 KIRGVINQLAFGIDKGKSMCVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLNAHSPMEL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S + K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 WKKVYEKLFPPK--SLHTLKDIKDPARDPQYAEAEVDEMRIQKDQELEQYKR 338
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K++I + LR++AH GASL+F S + L+ + R ++N AF ++ D
Sbjct: 192 QDFDSEKRKIICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKGKSMCVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS++ I G+ DI L
Sbjct: 251 QNKPLFITAGLDSLSQI-GSPPVPDNDIGKL 280
>gi|198432819|ref|XP_002128888.1| PREDICTED: similar to Dynein cytoplasmic 2 light intermediate chain
1 [Ciona intestinalis]
Length = 347
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 138/242 (57%), Gaps = 11/242 (4%)
Query: 33 SQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGS 92
S E+ +L +G KS GK+T + +FL +++ P+PT ALEY +AR++ K H+WELG
Sbjct: 23 SLEKFILFVGGKSSGKTTAILKFLSRDEAPRPTTALEYTFARRANNLQDKMTGHIWELGG 82
Query: 93 GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFES--NESVR 150
G + +++ + S ++ T++L+LDLS + LW AE L RA ++ ++ +
Sbjct: 83 GVNLIKLMDV--SLTVDTIHSMTVILVLDLSNPSELWYTAENLLKAARARIDATLSQMSK 140
Query: 151 EKRGSFEHF------RTADEHR-DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
+K G + F R + R D +I F VPL++IG K+D F+ +EP +K++ QC+
Sbjct: 141 QKAGLQQKFLKEAWERLGGKDRPDAHVINPFLVPLVIIGSKFDKFQEMEPEQKKVITQCI 200
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
RYLA NGAS +F SS VK R I+N AF L D +P++VP G DS+
Sbjct: 201 RYLALSNGASAIFMSSKIEATVKGLRHIMNVAAFGGPLNKTPVIDNKRPLYVPAGIDSLD 260
Query: 264 SI 265
I
Sbjct: 261 GI 262
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 7/185 (3%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D +I F VPL++IG K+D F+ +EP +K++ QC+RYLA NGAS +F SS VK
Sbjct: 164 DAHVINPFLVPLVIIGSKFDKFQEMEPEQKKVITQCIRYLALSNGASAIFMSSKIEATVK 223
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEG----TTQYVTAGSTSSLDK 826
R I+N AF L D +P++VP G DS+ I ++ S + +
Sbjct: 224 GLRHIMNVAAFGGPLNKTPVIDNKRPLYVPAGIDSLDGIGSPPLKSSDIGRVSSRNPTEV 283
Query: 827 YKHIFTTHFLQDDP-SQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDK 885
+K F HF Q++ S+ ++ DPA D+ + EP ID LR QK +L+ +++ K
Sbjct: 284 WKSAFCGHFPQENTGSKLQASLQDDPAKDKQFKEPRIDELRAQKDRELEAFKKQEGQ--K 341
Query: 886 YRTRV 890
+ TR+
Sbjct: 342 WTTRI 346
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 23/220 (10%)
Query: 394 HLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFES 453
H+WELG G + +++ + S ++ T++L+LDLS + LW AE L RA ++
Sbjct: 76 HIWELGGGVNLIKLMDV--SLTVDTIHSMTVILVLDLSNPSELWYTAENLLKAARARIDA 133
Query: 454 --NESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLIL 511
++ ++K G + F R +GGK D +I F VPL++
Sbjct: 134 TLSQMSKQKAGLQQKFLKEAWER--------------LGGKDR--PDAHVINPFLVPLVI 177
Query: 512 IGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSH 571
IG K+D F+ +EP +K++ QC+RYLA NGAS +F SS VK R I+N AF
Sbjct: 178 IGSKFDKFQEMEPEQKKVITQCIRYLALSNGASAIFMSSKIEATVKGLRHIMNVAAFGGP 237
Query: 572 LASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGR 611
L D +P++VP G DS+ I G+ ++D +GR
Sbjct: 238 LNKTPVIDNKRPLYVPAGIDSLDGI-GSPPLKSSD--IGR 274
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+ +EP +K++ QC+RYLA NGAS +F SS VK R I+N AF L D
Sbjct: 186 QEMEPEQKKVITQCIRYLALSNGASAIFMSSKIEATVKGLRHIMNVAAFGGPLNKTPVID 245
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
+P++VP G DS+ I G+ ++DI +
Sbjct: 246 NKRPLYVPAGIDSLDGI-GSPPLKSSDIGRV 275
>gi|443726377|gb|ELU13557.1| hypothetical protein CAPTEDRAFT_165957 [Capitella teleta]
Length = 355
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 160/271 (59%), Gaps = 20/271 (7%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
KSL DIAIE +H + E E+++L +G+K+ GK++++ RFL+K++ K
Sbjct: 8 KSLWDIAIEDSHTAEAEGAKGE---------EKSILFVGSKNAGKTSIILRFLDKDEPAK 58
Query: 64 PTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDL 122
PT ALEY + R++ G + KD+ H++ELG GT ++A + S ++ +L L+LDL
Sbjct: 59 PTTALEYTFGRRAKGHNLGKDLAHIYELGGGTWLSKLADIV--ISPSSLLHSSLALVLDL 116
Query: 123 SRLNSLWTEAETFLAKFRAIFES--------NESVREKRGSFEHFRTADEHRDKGLIRTF 174
S+ +LW ET+L R++ ++ N +++K R +++ DK ++ F
Sbjct: 117 SKPEALWHTLETWLNHLRSLTDTAIGVAKADNPQIKDKLQKAAWERVGEDNVDKDMMTPF 176
Query: 175 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 234
+PL++IG KYD+F++ + K+++ + LR++AH +GA L F + L+ RTR ++++
Sbjct: 177 LLPLVIIGAKYDIFQDFDSEKRKVICKTLRFVAHTHGAHLQFFTVKQEALINRTRGVISN 236
Query: 235 YAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
+ F + + +V +++KP+ +P G DS I
Sbjct: 237 FVFGTSASKSVQLEHSKPLVIPAGMDSFNQI 267
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 102/176 (57%), Gaps = 14/176 (7%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
DK ++ F +PL++IG KYD+F++ + K+++ + LR++AH +GA L F + L+
Sbjct: 169 DKDMMTPFLLPLVIIGAKYDIFQDFDSEKRKVICKTLRFVAHTHGAHLQFFTVKQEALIN 228
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
RTR +++++ F + + +V +++KP+ +P G DS I +G VTA + L
Sbjct: 229 RTRGVISNFVFGTSASKSVQLEHSKPLVIPAGMDSFNQIGSPPLADGDLGRVTARTPMEL 288
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSA--PDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K FT+ F P QN S A DPA D Y E +D++R QK E+L++ RR
Sbjct: 289 --WKSAFTSFF----PQQNVSDPAMVEDPAKDAQYKEISVDTMRLQKDEELERYRR 338
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 36/229 (15%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
D+ H++ELG GT ++A + S ++ +L L+LDLS+ +LW ET+L R++
Sbjct: 79 DLAHIYELGGGTWLSKLADIV--ISPSSLLHSSLALVLDLSKPEALWHTLETWLNHLRSL 136
Query: 451 FES--------NESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLI 502
++ N +++K R +++ DK ++ F +PL++IG KYD+F+D
Sbjct: 137 TDTAIGVAKADNPQIKDKLQKAAWERVGEDNVDKDMMTPFLLPLVIIGAKYDIFQD---- 192
Query: 503 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 562
+ K+++ + LR++AH +GA L F + L+ RTR +
Sbjct: 193 -------------------FDSEKRKVICKTLRFVAHTHGAHLQFFTVKQEALINRTRGV 233
Query: 563 LNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGR 611
++++ F + + +V +++KP+ +P G DS I G+ AD ++GR
Sbjct: 234 ISNFVFGTSASKSVQLEHSKPLVIPAGMDSFNQI-GSPPL--ADGDLGR 279
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH +GA L F + L+ RTR +++++ F + + +V +
Sbjct: 191 QDFDSEKRKVICKTLRFVAHTHGAHLQFFTVKQEALINRTRGVISNFVFGTSASKSVQLE 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHLWELGSGTSRLEV---ASLFSSF 414
++KP+ +P G DS I G+ D LG T+R + S F+SF
Sbjct: 251 HSKPLVIPAGMDSFNQI-GSPPLADGD------LGRVTARTPMELWKSAFTSF 296
>gi|410900784|ref|XP_003963876.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Takifugu rubripes]
Length = 359
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 155/277 (55%), Gaps = 17/277 (6%)
Query: 3 PKSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTP 62
PK+ D +LA + S + + + ERT+ L+G+K+ GK++++FR L++++
Sbjct: 2 PKTSSDTLWDLAAAEVRRRESEDGYAERNMAVERTVFLMGSKAGGKTSILFRCLDRDEPS 61
Query: 63 KPTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLML 120
KPTLALEY + R++ G + KDI H+WELG GT+ ++ + +S +L +++L++
Sbjct: 62 KPTLALEYTFGRRARGHNIPKDIAHIWELGGGTALSDLVQIPITSANL---KFLSVILVV 118
Query: 121 DLSRLNSLWTEAETFL----AKFRAIFESNESVREKRGSFEHFRT--------ADEHRDK 168
DLS+ N LW E L A F + + + + H + ++ DK
Sbjct: 119 DLSKPNDLWGTTEKLLQTTQAHLEKTFSGAQKAQAAKPAANHPSSIPSAARVLPTDYPDK 178
Query: 169 GLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRT 228
LI FPVPL++IG KYD+F++ + +KK++ Q LR++AH ASL+F S L+ +T
Sbjct: 179 ELISPFPVPLLIIGSKYDVFQDFDSDKKKLIAQMLRFVAHSYAASLIFTSIKSVSLMSKT 238
Query: 229 RDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
+ +H AF V+ D KP+ +P G+DS + I
Sbjct: 239 KTYFSHLAFDLDRVKTVSTDLTKPLIIPAGSDSFSQI 275
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 98/174 (56%), Gaps = 6/174 (3%)
Query: 709 FEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGL 768
+ DK LI FPVPL++IG KYD+F++ + +KK++ Q LR++AH ASL+F S L
Sbjct: 175 YPDKELISPFPVPLLIIGSKYDVFQDFDSDKKKLIAQMLRFVAHSYAASLIFTSIKSVSL 234
Query: 769 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSL 824
+ +T+ +H AF V+ D KP+ +P G+DS + I ++ + +
Sbjct: 235 MSKTKTYFSHLAFDLDRVKTVSTDLTKPLIIPAGSDSFSQIGSPCTTDVDIISLHAKNPK 294
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
D +K I F Q+ S + + DPA D Y EP ID++R QK ++L+Q +R
Sbjct: 295 DLWKKICERVFPQE--SIREQQDLKDPAKDPQYKEPQIDAMRAQKDQELEQYKR 346
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 107/214 (50%), Gaps = 23/214 (10%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H+WELG GT+ ++ + +S +L +++L++DLS+ N LW E L
Sbjct: 80 IPKDIAHIWELGGGTALSDLVQIPITSANL---KFLSVILVVDLSKPNDLWGTTEKLLQT 136
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDKGLI----RTFPVPLILIGGKYDLFEDKGLI 502
+A E S G+ + I R P + DK LI
Sbjct: 137 TQAHLEKTFS-----GAQKAQAAKPAANHPSSIPSAARVLPTD----------YPDKELI 181
Query: 503 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 562
FPVPL++IG KYD+F++ + +KK++ Q LR++AH ASL+F S L+ +T+
Sbjct: 182 SPFPVPLLIIGSKYDVFQDFDSDKKKLIAQMLRFVAHSYAASLIFTSIKSVSLMSKTKTY 241
Query: 563 LNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
+H AF V+ D KP+ +P G+DS + I
Sbjct: 242 FSHLAFDLDRVKTVSTDLTKPLIIPAGSDSFSQI 275
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + +KK++ Q LR++AH ASL+F S L+ +T+ +H AF V+ D
Sbjct: 199 QDFDSDKKKLIAQMLRFVAHSYAASLIFTSIKSVSLMSKTKTYFSHLAFDLDRVKTVSTD 258
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
KP+ +P G+DS + I G+ DI L
Sbjct: 259 LTKPLIIPAGSDSFSQI-GSPCTTDVDIISL 288
>gi|308321210|gb|ADO27757.1| cytoplasmic dynein 2 light intermediate chain 1 [Ictalurus
furcatus]
Length = 387
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 147/257 (57%), Gaps = 23/257 (8%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
ERT+ +G+K+ GK+T++FR +++++TPKPTLALEY + R++ + +KDI HLWELG G
Sbjct: 43 ERTVFFMGSKTGGKTTILFRCIDRDETPKPTLALEYTFGRRARAHSTLKDIAHLWELGGG 102
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLS--RLNSLWTEAETFLA----KFRAIFESNE 147
TS ++ + +T+Q+ L L+L L + N+LWT E L + F
Sbjct: 103 TSLSDLVQI----PITSQNLSMLSLVLVLDLSKPNALWTTMEKLLQAALNQVEKAFAITT 158
Query: 148 SVREKRGSFEHFRT------ADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQ 201
E R S + ++ +H D+ LI FPVPL++IG K+D+F++ E K+++ +
Sbjct: 159 RPGEARPSKQLSQSRALRILPKDHPDRELISPFPVPLLMIGSKFDIFQDFESEKRKVICK 218
Query: 202 CLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDS 261
LR+LAH GASL+F SS V + ++ NH AF + D +KP+ +P G DS
Sbjct: 219 TLRFLAHYYGASLIFTSSKSETTVSKVKNFFNHLAFGIERGKYFSTDPSKPLVIPAGLDS 278
Query: 262 VASIE------GTTHGK 272
++ I GT H K
Sbjct: 279 LSQIGSVAVDLGTLHAK 295
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 96/167 (57%), Gaps = 3/167 (1%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FPVPL++IG K+D+F++ E K+++ + LR+LAH GASL+F SS V
Sbjct: 184 DRELISPFPVPLLMIGSKFDIFQDFESEKRKVICKTLRFLAHYYGASLIFTSSKSETTVS 243
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYV-TAGSTSSLDKYKH 829
+ ++ NH AF + D +KP+ +P G DS++ I + T + + LD +K
Sbjct: 244 KVKNFFNHLAFGIERGKYFSTDPSKPLVIPAGLDSLSQIGSVAVDLGTLHAKTPLDLWKK 303
Query: 830 IFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQM 876
+F F + N+ K DPA D YSE +ID++R QK + L+ +
Sbjct: 304 VFERFFPPE--GTNERKEVKDPAKDPQYSELLIDAMRAQKDQYLEYL 348
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 19/208 (9%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLS--RLNSLWTEAETFLAKFR 448
DI HLWELG GTS ++ + +T+Q+ L L+L L + N+LWT E L
Sbjct: 92 DIAHLWELGGGTSLSDLVQI----PITSQNLSMLSLVLVLDLSKPNALWTTMEKLLQAAL 147
Query: 449 AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
E ++ + G + + R +R P D+ LI FPVP
Sbjct: 148 NQVEKAFAITTRPGEARPSKQLSQSR---ALRILPKD----------HPDRELISPFPVP 194
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
L++IG K+D+F++ E K+++ + LR+LAH GASL+F SS V + ++ NH AF
Sbjct: 195 LLMIGSKFDIFQDFESEKRKVICKTLRFLAHYYGASLIFTSSKSETTVSKVKNFFNHLAF 254
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSVASI 596
+ D +KP+ +P G DS++ I
Sbjct: 255 GIERGKYFSTDPSKPLVIPAGLDSLSQI 282
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR+LAH GASL+F SS V + ++ NH AF + D
Sbjct: 206 QDFESEKRKVICKTLRFLAHYYGASLIFTSSKSETTVSKVKNFFNHLAFGIERGKYFSTD 265
Query: 365 YNKPIFVPFGTDSVASI 381
+KP+ +P G DS++ I
Sbjct: 266 PSKPLVIPAGLDSLSQI 282
>gi|312093505|ref|XP_003147706.1| hypothetical protein LOAG_12144 [Loa loa]
Length = 375
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 147/253 (58%), Gaps = 10/253 (3%)
Query: 20 SPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKT 79
+P +S + D+Q+ + L++ G+K+ GK++++ RFL +N+ + T+ALEY+Y R++
Sbjct: 30 TPYNSLIIGSDLQASDTRLIICGSKNCGKTSMILRFLNRNEDARSTIALEYMYGRRNRGK 89
Query: 80 VMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKF 139
V KD+ H+WELG GT+ + + S + Q +L++++DL+ +W T L
Sbjct: 90 V-KDVGHIWELGGGTNLSNLLQIPLSSNYIQQC--SLMIVIDLTAPFDMWNTFYTLLDNA 146
Query: 140 RAIFESNESVREKRG--SFEHF---RTA--DEHRDKGLIRTFPVPLILIGGKYDLFENLE 192
R I ++ KR S+E F R A EH+D + FP+PLIL+G KYD F++ E
Sbjct: 147 RIIVDNAMKQYLKRSPDSYEAFMIYRNAVFKEHKDAEYLDPFPIPLILLGAKYDKFQDFE 206
Query: 193 PNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKP 252
P +++ + LR++AH+NGA+L S+ L+ + R +++ F + + D+NKP
Sbjct: 207 PEQRKNICKFLRFMAHMNGATLAMFSNKMENLMTKIRVLISSVIFGTTALKTICTDHNKP 266
Query: 253 IFVPFGTDSVASI 265
+ VP G DS+ I
Sbjct: 267 LSVPCGADSLMDI 279
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
D+ H+WELG GT+ + + S + Q +L++++DL+ +W T L R I
Sbjct: 92 DVGHIWELGGGTNLSNLLQIPLSSNYIQQC--SLMIVIDLTAPFDMWNTFYTLLDNARII 149
Query: 451 FESNESVREKRG--SFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
++ KR S+E F +I + +D + FP+P
Sbjct: 150 VDNAMKQYLKRSPDSYEAF------------------MIYRNAVFKEHKDAEYLDPFPIP 191
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
LIL+G KYD F++ EP +++ + LR++AH+NGA+L S+ L+ + R +++ F
Sbjct: 192 LILLGAKYDKFQDFEPEQRKNICKFLRFMAHMNGATLAMFSNKMENLMTKIRVLISSVIF 251
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKHLTTKYSSNSALGLMN 628
+ + D+NKP+ VP G DS+ I G ++ SS S +G N
Sbjct: 252 GTTALKTICTDHNKPLSVPCGADSLMDI-GAPPFIN--------------SSLSLIGAAN 296
Query: 629 DNPLW 633
+W
Sbjct: 297 SRDIW 301
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 11/175 (6%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D + FP+PLIL+G KYD F++ EP +++ + LR++AH+NGA+L S+ L+
Sbjct: 180 KDAEYLDPFPIPLILLGAKYDKFQDFEPEQRKNICKFLRFMAHMNGATLAMFSNKMENLM 239
Query: 770 KRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTA-----GSTSSL 824
+ R +++ F + + D+NKP+ VP G DS+ I G ++ + G+ +S
Sbjct: 240 TKIRVLISSVIFGTTALKTICTDHNKPLSVPCGADSLMDI-GAPPFINSSLSLIGAANSR 298
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPD-PALDQNYSEPVIDSLRNQKLEQLDQMRR 878
D + + F P++ K D PA D + EP ID L Q+ +L+Q R
Sbjct: 299 DIWHEAYLEFF----PTKEKYDEREDNPAEDGQHREPEIDDLIEQRTGELEQYIR 349
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ EP +++ + LR++AH+NGA+L S+ L+ + R +++ F + + D
Sbjct: 203 QDFEPEQRKNICKFLRFMAHMNGATLAMFSNKMENLMTKIRVLISSVIFGTTALKTICTD 262
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHLWELGSGTSR 404
+NKP+ VP G DS+ I G ++ + + +G+ SR
Sbjct: 263 HNKPLSVPCGADSLMDI-GAPPFINSSLSL---IGAANSR 298
>gi|393906602|gb|EFO16364.2| hypothetical protein LOAG_12144 [Loa loa]
Length = 285
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 146/250 (58%), Gaps = 10/250 (4%)
Query: 20 SPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKT 79
+P +S + D+Q+ + L++ G+K+ GK++++ RFL +N+ + T+ALEY+Y R++
Sbjct: 30 TPYNSLIIGSDLQASDTRLIICGSKNCGKTSMILRFLNRNEDARSTIALEYMYGRRNRGK 89
Query: 80 VMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKF 139
V KD+ H+WELG GT+ + + S + Q +L++++DL+ +W T L
Sbjct: 90 V-KDVGHIWELGGGTNLSNLLQIPLSSNYIQQC--SLMIVIDLTAPFDMWNTFYTLLDNA 146
Query: 140 RAIFESNESVREKRG--SFEHF---RTA--DEHRDKGLIRTFPVPLILIGGKYDLFENLE 192
R I ++ KR S+E F R A EH+D + FP+PLIL+G KYD F++ E
Sbjct: 147 RIIVDNAMKQYLKRSPDSYEAFMIYRNAVFKEHKDAEYLDPFPIPLILLGAKYDKFQDFE 206
Query: 193 PNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKP 252
P +++ + LR++AH+NGA+L S+ L+ + R +++ F + + D+NKP
Sbjct: 207 PEQRKNICKFLRFMAHMNGATLAMFSNKMENLMTKIRVLISSVIFGTTALKTICTDHNKP 266
Query: 253 IFVPFGTDSV 262
+ VP G DS+
Sbjct: 267 LSVPCGADSL 276
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
D+ H+WELG GT+ + + S + Q +L++++DL+ +W T L R I
Sbjct: 92 DVGHIWELGGGTNLSNLLQIPLSSNYIQQC--SLMIVIDLTAPFDMWNTFYTLLDNARII 149
Query: 451 FESNESVREKRG--SFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
++ KR S+E F +I + +D + FP+P
Sbjct: 150 VDNAMKQYLKRSPDSYEAF------------------MIYRNAVFKEHKDAEYLDPFPIP 191
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
LIL+G KYD F++ EP +++ + LR++AH+NGA+L S+ L+ + R +++ F
Sbjct: 192 LILLGAKYDKFQDFEPEQRKNICKFLRFMAHMNGATLAMFSNKMENLMTKIRVLISSVIF 251
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSV 593
+ + D+NKP+ VP G DS+
Sbjct: 252 GTTALKTICTDHNKPLSVPCGADSL 276
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D + FP+PLIL+G KYD F++ EP +++ + LR++AH+NGA+L S+ L+
Sbjct: 180 KDAEYLDPFPIPLILLGAKYDKFQDFEPEQRKNICKFLRFMAHMNGATLAMFSNKMENLM 239
Query: 770 KRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSV 806
+ R +++ F + + D+NKP+ VP G DS+
Sbjct: 240 TKIRVLISSVIFGTTALKTICTDHNKPLSVPCGADSL 276
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ EP +++ + LR++AH+NGA+L S+ L+ + R +++ F + + D
Sbjct: 203 QDFEPEQRKNICKFLRFMAHMNGATLAMFSNKMENLMTKIRVLISSVIFGTTALKTICTD 262
Query: 365 YNKPIFVPFGTDSV 378
+NKP+ VP G DS+
Sbjct: 263 HNKPLSVPCGADSL 276
>gi|326915300|ref|XP_003203957.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Meleagris gallopavo]
Length = 343
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 138/245 (56%), Gaps = 25/245 (10%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGK-TVMKDICHLWE 89
++ E+++L +G+K+ GK+T++ R LE+ + PKPTL LEY + R++ + KDI H WE
Sbjct: 29 VELWEKSVLFMGSKNGGKTTIILRCLEREEIPKPTLVLEYTFGRRARRHNAPKDIAHFWE 88
Query: 90 LGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFR-------AI 142
+G GTS LE+ + ++ F +VL+LDLS+ N LW E L R A
Sbjct: 89 IGGGTSLLELIRI--PITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNHVNKILAK 146
Query: 143 FESN--ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAV 200
E E E + ++ D H D L+ FP+PL++IG KYD+F
Sbjct: 147 LEKTDPEVAAEIKQKMQNNLQRD-HPDYDLVDPFPIPLVIIGSKYDIFH----------- 194
Query: 201 QCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTD 260
LR+++H GASL+F S + L+ + R ++NH AF + +V+ D++KP+F+P G D
Sbjct: 195 XTLRFVSHYYGASLVFTSKSE-ALLLKARALINHLAFGYDRSKSVSVDHSKPLFIPAGLD 253
Query: 261 SVASI 265
S++ I
Sbjct: 254 SLSQI 258
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 32/226 (14%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WE+G GTS LE+ + ++ F +VL+LDLS+ N LW E L R
Sbjct: 82 DIAHFWEIGGGTSLLELIRI--PITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNH 139
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
+ EK E + L R P D L+ FP+PL+
Sbjct: 140 VNKILAKLEKTDP-EVAAEIKQKMQNNLQRDHP--------------DYDLVDPFPIPLV 184
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
+IG KYD+F LR+++H GASL+F S + L+ + R ++NH AF
Sbjct: 185 IIGSKYDIFH-----------XTLRFVSHYYGASLVFTSKSE-ALLLKARALINHLAFGY 232
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKHLTT 616
+ +V+ D++KP+F+P G DS++ I T+D+ +G+ T
Sbjct: 233 DRSKSVSVDHSKPLFIPAGLDSLSQIGPPP---TSDSNIGKMRANT 275
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 22/174 (12%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D L+ FP+PL++IG KYD+F LR+++H GASL+F S + L+
Sbjct: 172 DYDLVDPFPIPLVIIGSKYDIFH-----------XTLRFVSHYYGASLVFTSKSE-ALLL 219
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI----EGTTQYVTAGSTSSLDK 826
+ R ++NH AF + +V+ D++KP+F+P G DS++ I + + + L+
Sbjct: 220 KARALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQIGPPPTSDSNIGKMRANTPLEL 279
Query: 827 YKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K +F F P ++ S + + DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 280 WKKVFEKTF----PPKSFSDLQDSKDPAQDSQYAEHEVDVMRAQKNQELEQYKR 329
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 318 CLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDS 377
LR+++H GASL+F S + L+ + R ++NH AF + +V+ D++KP+F+P G DS
Sbjct: 196 TLRFVSHYYGASLVFTSKSE-ALLLKARALINHLAFGYDRSKSVSVDHSKPLFIPAGLDS 254
Query: 378 VASI 381
++ I
Sbjct: 255 LSQI 258
>gi|391334585|ref|XP_003741683.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Metaseiulus occidentalis]
Length = 342
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 145/259 (55%), Gaps = 21/259 (8%)
Query: 23 SSEVHKIDIQSQER-----TLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSG 77
++ VHK+ + +E T+ IG++ GK++++ +FLE++D PKP++ALEY + R+S
Sbjct: 14 AASVHKMKQKDRENNCVESTMFFIGSRQAGKTSIISKFLERSDHPKPSVALEYSFGRRSI 73
Query: 78 KTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 136
D+CH++EL GT+ ++ S+ +S S+ + ++L+LDLS + L+ + L
Sbjct: 74 LGAGSDVCHIYELAGGTTFKKMVSIPINSRSVMS---LVVILVLDLSAPDELFVTMDCLL 130
Query: 137 AKFRAIFESNESVREKR--------GSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLF 188
++ R S S EK S R ++H D ++ FPVPL+++G KYD+F
Sbjct: 131 SEVRERLASVMSSTEKSVPGFAATVESGARARIGEQHPDLKVMDVFPVPLLILGTKYDIF 190
Query: 189 ENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV-KRTRDILNHYAFSSHLASAVNF 247
+ EP K+I +CLR+LAH +GASL F S P ++ R + IL + S N
Sbjct: 191 RDFEPEHKKIVCRCLRFLAHSHGASLQFVSQHTPDVLGSRVQAILKN---GSEGREKPNM 247
Query: 248 DYNKPIFVPFGTDSVASIE 266
DYN + + FG DS IE
Sbjct: 248 DYNTALNISFGEDSFEEIE 266
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 26/247 (10%)
Query: 390 ADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFR 448
+D+CH++EL GT+ ++ S+ +S S+ + ++L+LDLS + L+ + L++ R
Sbjct: 78 SDVCHIYELAGGTTFKKMVSIPINSRSVMS---LVVILVLDLSAPDELFVTMDCLLSEVR 134
Query: 449 AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
S S EK S F E + I G ++ D ++ FPVP
Sbjct: 135 ERLASVMSSTEK--SVPGFAATVESGARARI----------GEQH---PDLKVMDVFPVP 179
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV-KRTRDILNHYA 567
L+++G KYD+F + EP K+I +CLR+LAH +GASL F S P ++ R + IL +
Sbjct: 180 LLILGTKYDIFRDFEPEHKKIVCRCLRFLAHSHGASLQFVSQHTPDVLGSRVQAILKN-- 237
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRK---HLTTKYSSNSAL 624
S N DYN + + FG DS IE A ++ RK L K +
Sbjct: 238 -GSEGREKPNMDYNTALNISFGEDSFEEIEIFDVPNRASLDIARKACRELMKKTFGEKDI 296
Query: 625 GLMNDNP 631
+ +D+P
Sbjct: 297 DVRSDDP 303
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV- 769
D ++ FPVPL+++G KYD+F + EP K+I +CLR+LAH +GASL F S P ++
Sbjct: 169 DLKVMDVFPVPLLILGTKYDIFRDFEPEHKKIVCRCLRFLAHSHGASLQFVSQHTPDVLG 228
Query: 770 KRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKH 829
R + IL + S N DYN + + FG DS IE + +SLD +
Sbjct: 229 SRVQAILKN---GSEGREKPNMDYNTALNISFGEDSFEEIE----IFDVPNRASLDIARK 281
Query: 830 IFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLD 874
+ ++ + DP D N+ E ID + QKL++L+
Sbjct: 282 ACRELMKKTFGEKDIDVRSDDPGRDPNFKEHDIDVVLAQKLKELE 326
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV-KRTRDILNHYAFSSHLASAVNF 363
R+ EP K+I +CLR+LAH +GASL F S P ++ R + IL + S N
Sbjct: 191 RDFEPEHKKIVCRCLRFLAHSHGASLQFVSQHTPDVLGSRVQAILKN---GSEGREKPNM 247
Query: 364 DYNKPIFVPFGTDSVASIE 382
DYN + + FG DS IE
Sbjct: 248 DYNTALNISFGEDSFEEIE 266
>gi|62078609|ref|NP_001013962.1| cytoplasmic dynein 2 light intermediate chain 1 [Rattus norvegicus]
gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus]
Length = 311
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 130/216 (60%), Gaps = 20/216 (9%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ KPTLALEY Y RK+ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDEPAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFR------------A 141
TS L++ S+ ++ F++VL+LDLS+ N LW E L + A
Sbjct: 91 TSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWPTMENLLQATKSHVDKVTMKLGKA 148
Query: 142 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQ 201
+++ +R++ S +H D+ LI FP+PL++IG KYD+F++ +P K+++ +
Sbjct: 149 NSKASSEMRQRMWSVMQ----KDHPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICK 204
Query: 202 CLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 237
LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 205 TLRFVAHYYGASLMFTSKSE-ALLLKMRGVINQLAF 239
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 18/178 (10%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ ++ F++VL+LDLS+ N LW E L +A
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWPTMENLL---QAT 134
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
+ V K G + + + E R + + D+ LI FP+PL+
Sbjct: 135 KSHVDKVTMKLGK-ANSKASSEMRQR-----------MWSVMQKDHPDRELIDPFPIPLV 182
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
+IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 183 IIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKMRGVINQLAF 239
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 228
Query: 771 RTRDILNHYAF 781
+ R ++N AF
Sbjct: 229 KMRGVINQLAF 239
>gi|328771911|gb|EGF81950.1| hypothetical protein BATDEDRAFT_23711 [Batrachochytrium
dendrobatidis JAM81]
Length = 404
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 149/275 (54%), Gaps = 21/275 (7%)
Query: 3 PKSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTP 62
PKS KD+ + K +SE + + E T+ ++G+K GKS+++ FL++++TP
Sbjct: 33 PKSRKDLWTLIKESKDHDKKNSEGN----ATLETTIYVVGSKGSGKSSMILGFLDRDETP 88
Query: 63 KPTLALEYIYARKS-GKTVMKDICHLWELGSG---TSRLEVASLFSSFSLTAQSGFTLVL 118
P++ALEY + R++ G KD+ H+WEL G + LE+ S+ ++ T ++
Sbjct: 89 SPSVALEYTFGRRTRGVNSTKDVVHIWELAGGIYLSDLLEIPITESNIHVS-----TFLI 143
Query: 119 MLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGS--------FEHFRTADEHRDKGL 170
+LDLS +++ E L K + E+RGS R +H D L
Sbjct: 144 VLDLSNPSTILDTLEPLLDKIKTKVNKVLDGLEQRGSKRPKVLRNAATKRYGVDHPDIDL 203
Query: 171 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 230
+ PVP+ +IG KYD +++E +++ + LRY+AH+NGASL+F S D L R+R
Sbjct: 204 VTLSPVPITIIGSKYDEMQSMESEMRKMLCKMLRYMAHINGASLIFVSQKDDTLASRSRH 263
Query: 231 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
+++++ F S+ ++ D+NKPI + G D+ I
Sbjct: 264 MMSYHGFKSNAPKSMVMDHNKPILIMAGQDTFCGI 298
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 39/224 (17%)
Query: 389 TADICHLWELGSG---TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
T D+ H+WEL G + LE+ S+ ++ T +++LDLS +++ E L
Sbjct: 108 TKDVVHIWELAGGIYLSDLLEIPITESNIHVS-----TFLIVLDLSNPSTILDTLEPLLD 162
Query: 446 KFRAIFESNESVREKRGS--------FEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
K + E+RGS R +H D L+ PVP+ +
Sbjct: 163 KIKTKVNKVLDGLEQRGSKRPKVLRNAATKRYGVDHPDIDLVTLSPVPITI--------- 213
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
IG KYD +++E +++ + LRY+AH+NGASL+F S D L
Sbjct: 214 --------------IGSKYDEMQSMESEMRKMLCKMLRYMAHINGASLIFVSQKDDTLAS 259
Query: 558 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQ 601
R+R +++++ F S+ ++ D+NKPI + G D+ I Q
Sbjct: 260 RSRHMMSYHGFKSNAPKSMVMDHNKPILIMAGQDTFCGIVQVVQ 303
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 63/104 (60%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D L+ PVP+ +IG KYD +++E +++ + LRY+AH+NGASL+F S D L
Sbjct: 200 DIDLVTLSPVPITIIGSKYDEMQSMESEMRKMLCKMLRYMAHINGASLIFVSQKDDTLAS 259
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQ 814
R+R +++++ F S+ ++ D+NKPI + G D+ I Q
Sbjct: 260 RSRHMMSYHGFKSNAPKSMVMDHNKPILIMAGQDTFCGIVQVVQ 303
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+++E +++ + LRY+AH+NGASL+F S D L R+R +++++ F S+ ++ D
Sbjct: 222 QSMESEMRKMLCKMLRYMAHINGASLIFVSQKDDTLASRSRHMMSYHGFKSNAPKSMVMD 281
Query: 365 YNKPIFVPFGTDSVASIEGTTQ 386
+NKPI + G D+ I Q
Sbjct: 282 HNKPILIMAGQDTFCGIVQVVQ 303
>gi|196010391|ref|XP_002115060.1| hypothetical protein TRIADDRAFT_58820 [Trichoplax adhaerens]
gi|190582443|gb|EDV22516.1| hypothetical protein TRIADDRAFT_58820 [Trichoplax adhaerens]
Length = 367
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 143/263 (54%), Gaps = 26/263 (9%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
KSL DIAI L + + + ++ S + +G+K+ GKS+++ RFL++++ PK
Sbjct: 7 KSLWDIAI-LERNRAEQENKELIDGNNVGSDGTNVFFLGSKNSGKSSIIMRFLDRDENPK 65
Query: 64 PTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDL 122
PT+ALEY++ R++ G +KD+ H+WELG GT + T + T+
Sbjct: 66 PTVALEYLFGRRARGANTVKDVTHIWELGGGT-------FLTKLIDTVITPRTI------ 112
Query: 123 SRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIG 182
R+N + E + ++S+ E + R ++H DK L+ VPL+++G
Sbjct: 113 -RINQVVNE----------VAGKDKSIHEFLKQQLNRRINEDHPDKSLMEPLLVPLVIVG 161
Query: 183 GKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLA 242
KYD++++ +P K++I + LR++AH GA+L F S+ + LV R R ++ + AF +
Sbjct: 162 SKYDIYQDFDPEKRKIISKTLRFIAHTYGATLQFFSTKNESLVARARQLIGNLAFHFPPS 221
Query: 243 SAVNFDYNKPIFVPFGTDSVASI 265
D+NKPI VP GTD + I
Sbjct: 222 KTNATDHNKPIIVPAGTDLFSQI 244
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 102/181 (56%), Gaps = 6/181 (3%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
DK L+ VPL+++G KYD++++ +P K++I + LR++AH GA+L F S+ + LV
Sbjct: 146 DKSLMEPLLVPLVIVGSKYDIYQDFDPEKRKIISKTLRFIAHTYGATLQFFSTKNESLVA 205
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEG----TTQYVTAGSTSSLDK 826
R R ++ + AF + D+NKPI VP GTD + I Q + +D
Sbjct: 206 RARQLIGNLAFHFPPSKTNATDHNKPIIVPAGTDLFSQIGAPPLSDEQLGKISARRPMDL 265
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKY 886
+K F +F Q+ + S + +PA D Y+E ID++R QK ++L+Q RR+ + K K
Sbjct: 266 WKSAFCQYFPQE--ASTNSNTNKNPAADSQYTESPIDNMRIQKDKELEQYRRQSERKAKE 323
Query: 887 R 887
R
Sbjct: 324 R 324
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%)
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
DK L+ VPL+++G KYD++++ +P K++I + LR++AH GA+L F S+ + LV
Sbjct: 146 DKSLMEPLLVPLVIVGSKYDIYQDFDPEKRKIISKTLRFIAHTYGATLQFFSTKNESLVA 205
Query: 558 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
R R ++ + AF + D+NKPI VP GTD + I
Sbjct: 206 RARQLIGNLAFHFPPSKTNATDHNKPIIVPAGTDLFSQI 244
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K++I + LR++AH GA+L F S+ + LV R R ++ + AF + D
Sbjct: 168 QDFDPEKRKIISKTLRFIAHTYGATLQFFSTKNESLVARARQLIGNLAFHFPPSKTNATD 227
Query: 365 YNKPIFVPFGTDSVASI 381
+NKPI VP GTD + I
Sbjct: 228 HNKPIIVPAGTDLFSQI 244
>gi|449270269|gb|EMC80963.1| Cytoplasmic dynein 2 light intermediate chain 1, partial [Columba
livia]
Length = 354
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 146/273 (53%), Gaps = 24/273 (8%)
Query: 5 SLKDIAI-ELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
+L D+AI E+ ++P V + E+++L +G K+ GK++++ R LE+ + PK
Sbjct: 6 TLWDLAIAEVEKRENPGEDGKSV-----EVWEKSILFMGNKNGGKTSIILRCLEREEIPK 60
Query: 64 PTLALEYIYARKSGK-TVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDL 122
PTLALEY + R++ + KDI H WELG GTS LE+ + + F +VL+LDL
Sbjct: 61 PTLALEYTFGRRARRQNTAKDIAHFWELGGGTSLLELIRI--PITSNNIRSFAVVLVLDL 118
Query: 123 SRLNSLWTEAETFLAKFR--------AIFESNESVREKRGSFEHFRTADEHRDKGLIRTF 174
S+ N LWT E L R + ++N V + +H D LI F
Sbjct: 119 SKPNELWTTMEKLLQVTRNHVNKILTKLEKTNPEVATEIKQRMRNNLQKDHPDYELIDPF 178
Query: 175 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 234
P+PL++IG KYD+F + + ++I + LR+++H GASL+ L V + N
Sbjct: 179 PIPLVIIGSKYDIFHDFDSEMRKIISKTLRFVSHYYGASLVVFPVLSSLHVWQ-----NV 233
Query: 235 YAFSSH--LASAVNFDYNKPIFVPFGTDSVASI 265
+ + +V+ D++KP+F+P G DS++ I
Sbjct: 234 FGTRKQDGKSKSVSLDHSKPLFIPAGLDSLSQI 266
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 43/241 (17%)
Query: 386 QYVTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
Q DI H WELG GTS LE+ + + F +VL+LDLS+ N LWT E L
Sbjct: 76 QNTAKDIAHFWELGGGTSLLELIRI--PITSNNIRSFAVVLVLDLSKPNELWTTMEKLLQ 133
Query: 446 KFR--------AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
R + ++N V + +H D LI FP+PL++IG KYD+F
Sbjct: 134 VTRNHVNKILTKLEKTNPEVATEIKQRMRNNLQKDHPDYELIDPFPIPLVIIGSKYDIFH 193
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
D + ++I + LR+++H GASL+ L V
Sbjct: 194 D-----------------------FDSEMRKIISKTLRFVSHYYGASLVVFPVLSSLHVW 230
Query: 558 RTRDILNHYAFSSH--LASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKHLT 615
+ N + + +V+ D++KP+F+P G DS++ I +D+++G+
Sbjct: 231 Q-----NVFGTRKQDGKSKSVSLDHSKPLFIPAGLDSLSQIGPPP---ASDSDIGKMRAN 282
Query: 616 T 616
T
Sbjct: 283 T 283
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 13/174 (7%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D LI FP+PL++IG KYD+F + + ++I + LR+++H GASL+ L V
Sbjct: 171 DYELIDPFPIPLVIIGSKYDIFHDFDSEMRKIISKTLRFVSHYYGASLVVFPVLSSLHVW 230
Query: 771 RTRDILNHYAFSSH--LASAVNFDYNKPIFVPFGTDSVASI----EGTTQYVTAGSTSSL 824
+ N + + +V+ D++KP+F+P G DS++ I + + + L
Sbjct: 231 Q-----NVFGTRKQDGKSKSVSLDHSKPLFIPAGLDSLSQIGPPPASDSDIGKMRANTPL 285
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+ +K +F F + S + DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 286 ELWKKVFEKTFPPE--SSCDLQDTKDPAQDSQYAEYEVDVMRAQKKQELEQYKR 337
>gi|226479098|emb|CAX73044.1| hypotheticial protein [Schistosoma japonicum]
Length = 356
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 137/255 (53%), Gaps = 17/255 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E T++ G K GKST++ RFLE+N++PKPTLAL+Y Y RK G + + + H+WELG G
Sbjct: 24 ETTIIFAGNKGSGKSTIINRFLERNESPKPTLALDYTYGRKGVGNFLTRAVSHIWELGGG 83
Query: 94 TSRLEVASLFSSFSLTAQSGFTL--VLMLDLSRLNSLWTEAETFLAKFRAIFES------ 145
L+++ L +T + +L +L++DLS+ LW +T L +
Sbjct: 84 ---LKLSDLLGVV-ITPNNILSLHLILVIDLSKPEELWDTIDTLLKSVSGRIDQMLDRLY 139
Query: 146 NESVREKRGSFEHF---RTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQC 202
++V + F+ R H D L+ FP+PL ++G KYD+ ++ + +
Sbjct: 140 QKNVTRIQNIFKENLRNRIPSNHPDIELLNPFPLPLTVLGTKYDILMAKSAEQQNLIYRT 199
Query: 203 LRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSV 262
+R+L+H GAS+ F S D GL+K+ + L+H AF S V + KP+ +P G DS
Sbjct: 200 IRFLSHFYGASVYFCSVKDEGLLKKIKAYLSHIAFDSKNLFDVQMETGKPLMIPVGVDSF 259
Query: 263 ASIEGTTHGKDASLE 277
++I GT D +E
Sbjct: 260 SNI-GTPMNVDMEIE 273
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D L+ FP+PL ++G KYD+ ++ + + +R+L+H GAS+ F S D GL+K
Sbjct: 164 DIELLNPFPLPLTVLGTKYDILMAKSAEQQNLIYRTIRFLSHFYGASVYFCSVKDEGLLK 223
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTA-----GSTSSLD 825
+ + L+H AF S V + KP+ +P G DS ++I GT V S L+
Sbjct: 224 KIKAYLSHIAFDSKNLFDVQMETGKPLMIPVGVDSFSNI-GTPMNVDMEIERLTVKSPLE 282
Query: 826 KYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLD 874
+K++F + F Q + DP+ D YSEP++DS R K ++L+
Sbjct: 283 MWKNVFCSKFPQKSGLTTSFGNIIDPSKDLQYSEPLVDSARKIKHDELE 331
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 43/247 (17%)
Query: 382 EGTTQYVTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTL--VLMLDLSRLNSLWTE 439
+G ++T + H+WELG G L+++ L +T + +L +L++DLS+ LW
Sbjct: 64 KGVGNFLTRAVSHIWELGGG---LKLSDLLGVV-ITPNNILSLHLILVIDLSKPEELWDT 119
Query: 440 AETFLAKFRAIFES------NESVREKRGSFEHF---RTADEHRDKGLIRTFPVPLILIG 490
+T L + ++V + F+ R H D L+ FP+PL ++G
Sbjct: 120 IDTLLKSVSGRIDQMLDRLYQKNVTRIQNIFKENLRNRIPSNHPDIELLNPFPLPLTVLG 179
Query: 491 GKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSS 550
KYD+ K ++ + + +R+L+H GAS+ F S
Sbjct: 180 TKYDILMAKS-----------------------AEQQNLIYRTIRFLSHFYGASVYFCSV 216
Query: 551 LDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVG 610
D GL+K+ + L+H AF S V + KP+ +P G DS ++I GT V D E+
Sbjct: 217 KDEGLLKKIKAYLSHIAFDSKNLFDVQMETGKPLMIPVGVDSFSNI-GTPMNV--DMEIE 273
Query: 611 RKHLTTK 617
R LT K
Sbjct: 274 R--LTVK 278
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 311 KKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIF 370
++ + + +R+L+H GAS+ F S D GL+K+ + L+H AF S V + KP+
Sbjct: 192 QQNLIYRTIRFLSHFYGASVYFCSVKDEGLLKKIKAYLSHIAFDSKNLFDVQMETGKPLM 251
Query: 371 VPFGTDSVASIEGTTQYVTADICHL 395
+P G DS ++I GT V +I L
Sbjct: 252 IPVGVDSFSNI-GTPMNVDMEIERL 275
>gi|297265899|ref|XP_001107231.2| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Macaca mulatta]
Length = 350
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 134/241 (55%), Gaps = 15/241 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGT 94
E+++ IG+K+ GK+T++ R L++ A IY T+ KDI H WELG GT
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDREKCYCNDPAYNSIYPLFGYATLPKDIAHFWELGGGT 90
Query: 95 SRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
S L++ S+ +S +L F+LVL+LDLS+ N LW E L ++ +
Sbjct: 91 SLLDLISVPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKT 147
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
+ ++ E R + D H D+ LI FPVPL++IG KYD+F++ E K+++ + LR
Sbjct: 148 NPKAASEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLR 206
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+ + R ++N AF + ++ D NKP+ + G DS +
Sbjct: 207 FVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLLITAGLDSFSQ 265
Query: 265 I 265
I
Sbjct: 266 I 266
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 115/233 (49%), Gaps = 41/233 (17%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F+LVL+LDLS+ N LW E L ++
Sbjct: 79 DIAHFWELGGGTSLLDLISVPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLLQATKS 135
Query: 450 IFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKG 500
+ + ++ E R + D H D+ LI FPVPL++IG KYD+F+D
Sbjct: 136 HVDKMIMKLGKTNPKAASEMRQKIWNNMQKD-HPDRELIDPFPVPLVIIGSKYDIFQD-- 192
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 560
E K+++ + LR++AH GASL+F S + L+ + R
Sbjct: 193 ---------------------FESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIR 230
Query: 561 DILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
++N AF + ++ D NKP+ + G DS + I + ++G+ H
Sbjct: 231 GVINQLAFGIDKSKSICVDQNKPLLITAGLDSFSQIGSPP---VPENDIGKLH 280
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 169 DRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 227
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+ + G DS + I E + A S L
Sbjct: 228 KIRGVINQLAFGIDKSKSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMEL 287
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K+ DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 288 --WKKVYEKLFPPK--SINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKR 337
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 191 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 249
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+ + G DS + I G+ DI L
Sbjct: 250 QNKPLLITAGLDSFSQI-GSPPVPENDIGKL 279
>gi|195577829|ref|XP_002078771.1| GD23605 [Drosophila simulans]
gi|194190780|gb|EDX04356.1| GD23605 [Drosophila simulans]
Length = 368
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 148/280 (52%), Gaps = 30/280 (10%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQS--QERTLLLIGTKSVGKSTLVFRFLEKND-T 61
S++DIA LA + +++ + +ERT+L++G+K VGK+T + +F ++ +
Sbjct: 31 SIQDIAGRLAE------EQQRLRQLEATTTPKERTVLVLGSKCVGKTTAINKFFDREEHA 84
Query: 62 PKPTLALEYIYARKSGKTVMKDICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVL 118
+PTLALEY + R+ G + ++WELGS LEV A +VL
Sbjct: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VVL 139
Query: 119 MLDLSRLNSLWTEAETFLAKFRAIFESNESVREK-----RGSFEHF---RTADEHRDKGL 170
MLDLS+ WT+ E ++ + ++ + + EK R E R +++D
Sbjct: 140 MLDLSQPQRFWTDLE---CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDVEK 196
Query: 171 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 230
+ P P+I++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD
Sbjct: 197 LDPLPFPVIIVGGKYDVFSGFDPVIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256
Query: 231 ILNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 268
+NH F S H + D+N+P+ + FGTDS + I T
Sbjct: 257 TINHLGFGSPAHPFRSHVLDFNEPLCIWFGTDSWSKIGDT 296
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
P P+I++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD +N
Sbjct: 200 LPFPVIIVGGKYDVFSGFDPVIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIN 259
Query: 778 HYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHF 835
H F S H + D+N+P+ + FGTDS + I T S+++ F
Sbjct: 260 HLGFGSPAHPFRSHVLDFNEPLCIWFGTDSWSKIGDT-------GAQSVERIGATFGVEV 312
Query: 836 LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRT 888
Q + K + DPA D + E +ID +R+QK E+L + R+V ++ K+ +
Sbjct: 313 PQLQLEKQKLQETTDPAKDPGFKESLIDEMRSQKNEELAGLMRDVLLRGKFES 365
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 44/224 (19%)
Query: 389 TADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+ + ++WELGS LEV A +VLMLDLS+ WT+ E
Sbjct: 104 SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VVLMLDLSQPQRFWTDLE---C 155
Query: 446 KFRAIFESNESVREK-----RGSFEHF---RTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
++ + ++ + + EK R E R +++D + P P+I++GG
Sbjct: 156 AYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDVEKLDPLPFPVIIVGG------ 209
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
KYD+F +P ++ +CLR +AH+ G +LLF+S P L K
Sbjct: 210 -----------------KYDVFSGFDPVIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252
Query: 558 RTRDILNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 599
RD +NH F S H + D+N+P+ + FGTDS + I T
Sbjct: 253 VLRDTINHLGFGSPAHPFRSHVLDFNEPLCIWFGTDSWSKIGDT 296
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 308 EPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNFDY 365
+P ++ +CLR +AH+ G +LLF+S P L K RD +NH F S H + D+
Sbjct: 218 DPVIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTINHLGFGSPAHPFRSHVLDF 277
Query: 366 NKPIFVPFGTDSVASIEGT 384
N+P+ + FGTDS + I T
Sbjct: 278 NEPLCIWFGTDSWSKIGDT 296
>gi|194765521|ref|XP_001964875.1| GF22735 [Drosophila ananassae]
gi|190617485|gb|EDV33009.1| GF22735 [Drosophila ananassae]
Length = 369
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 143/275 (52%), Gaps = 19/275 (6%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKND-TPK 63
S++DIA LA + + +ERT+L++G+K VGK+T++ +F ++ + T +
Sbjct: 31 SIQDIAGRLAEEQQ----RLRQQEATAMPKERTVLILGSKCVGKTTVINKFFDREEHTTR 86
Query: 64 PTLALEYIYARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQS--GFTLVLMLD 121
PTLALEY YAR+ G + ++WELGS LE A + F +++MLD
Sbjct: 87 PTLALEYSYARRIGNGKTPQVMNVWELGS----LENADQLLEVPMRTHGLHQFAVLIMLD 142
Query: 122 LSRLNSLWTEAETFLAKFRAIFESN-ESVREKRGSFEHFRTADE-----HRDKGLIRTFP 175
LS+ WT+ E + + ES+ + RT + D G P
Sbjct: 143 LSQPQRFWTDLECAYKGLKDTAQQMMESLSPELREIVEQRTLERLGQQSKEDLGNQEPLP 202
Query: 176 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 235
P++++GGKYD+F L+P K+ +CLR +AH+ G +LLF+S P L K +D + H
Sbjct: 203 FPVVIVGGKYDVFAGLDPAVKKHTCRCLRSMAHLIGGALLFYSQRVPKLAKVLKDTICHL 262
Query: 236 AFSSHLASAVNF--DYNKPIFVPFGTDSVASIEGT 268
F S ++ D+N+P+ + FGTDS + I T
Sbjct: 263 GFGSPAQPFRSYTTDFNEPLSIWFGTDSWSKIGDT 297
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 9/181 (4%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
ED G P P++++GGKYD+F L+P K+ +CLR +AH+ G +LLF+S P L
Sbjct: 193 EDLGNQEPLPFPVVIVGGKYDVFAGLDPAVKKHTCRCLRSMAHLIGGALLFYSQRVPKLA 252
Query: 770 KRTRDILNHYAFSSHLASAVNF--DYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKY 827
K +D + H F S ++ D+N+P+ + FGTDS + I T S+++
Sbjct: 253 KVLKDTICHLGFGSPAQPFRSYTTDFNEPLSIWFGTDSWSKIGDT-------GAQSVERI 305
Query: 828 KHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYR 887
F Q + K + DPA D + E +ID +R QK E+L + R+V M+ K+
Sbjct: 306 GAAFGVEVPQLQLEKRKIQETTDPAKDPGFKESLIDEMRAQKNEELTGIMRDVLMRGKFE 365
Query: 888 T 888
+
Sbjct: 366 S 366
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 389 TADICHLWELGSGTSRLEVASLFSSFSLTAQS--GFTLVLMLDLSRLNSLWTEAETFLAK 446
T + ++WELGS LE A + F +++MLDLS+ WT+ E
Sbjct: 104 TPQVMNVWELGS----LENADQLLEVPMRTHGLHQFAVLIMLDLSQPQRFWTDLE---CA 156
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
++ + ++ + + E R E R L +G + ED G P
Sbjct: 157 YKGLKDTAQQMMESLSP--ELREIVEQRT----------LERLGQQSK--EDLGNQEPLP 202
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
P++++GGKYD+F L+P K+ +CLR +AH+ G +LLF+S P L K +D + H
Sbjct: 203 FPVVIVGGKYDVFAGLDPAVKKHTCRCLRSMAHLIGGALLFYSQRVPKLAKVLKDTICHL 262
Query: 567 AFSSHLASAVNF--DYNKPIFVPFGTDSVASIEGT 599
F S ++ D+N+P+ + FGTDS + I T
Sbjct: 263 GFGSPAQPFRSYTTDFNEPLSIWFGTDSWSKIGDT 297
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNF-- 363
L+P K+ +CLR +AH+ G +LLF+S P L K +D + H F S ++
Sbjct: 217 GLDPAVKKHTCRCLRSMAHLIGGALLFYSQRVPKLAKVLKDTICHLGFGSPAQPFRSYTT 276
Query: 364 DYNKPIFVPFGTDSVASIEGT 384
D+N+P+ + FGTDS + I T
Sbjct: 277 DFNEPLSIWFGTDSWSKIGDT 297
>gi|195339451|ref|XP_002036333.1| GM17453 [Drosophila sechellia]
gi|194130213|gb|EDW52256.1| GM17453 [Drosophila sechellia]
Length = 368
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 149/281 (53%), Gaps = 32/281 (11%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQS--QERTLLLIGTKSVGKSTLVFRFLEKND-T 61
S++DIA LA + +++ + +ERT+L++G+K VGK+T + +F ++ +
Sbjct: 31 SIQDIAGRLAE------EQQRLRQLEATTTPKERTVLVLGSKCVGKTTAINKFFDREEHA 84
Query: 62 PKPTLALEYIYARKSGKTVMKDICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVL 118
+PTLALEY + R+ G + ++WELGS LEV A +VL
Sbjct: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VVL 139
Query: 119 MLDLSRLNSLWTEAETFLAKFRAIFESNESVREK-----RGSFEHFRTAD----EHRDKG 169
MLDLS+ WT+ E ++ + ++ + + EK R E RT D +++D
Sbjct: 140 MLDLSQPQRFWTDLE---CAYKGLRDTAQQMMEKVTPELREILEQ-RTVDRVGQQNKDVE 195
Query: 170 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 229
+ P P+I++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K R
Sbjct: 196 KLDPLPFPVIIVGGKYDVFSGFDPVIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255
Query: 230 DILNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 268
D +NH F S H + D+N+P+ + FGTDS I T
Sbjct: 256 DTINHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWTKIGDT 296
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
P P+I++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD +N
Sbjct: 200 LPFPVIIVGGKYDVFSGFDPVIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIN 259
Query: 778 HYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHF 835
H F S H + D+N+P+ + FGTDS I T S+++ F
Sbjct: 260 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWTKIGDT-------GAQSVERIGATFGVEV 312
Query: 836 LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRT 888
Q + K + DPA D + E +ID +R+QK E+L + R+V ++ K+ +
Sbjct: 313 PQLQLEKQKLQETTDPAKDPGFKESLIDEMRSQKNEELAGLMRDVLLRGKFES 365
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 46/225 (20%)
Query: 389 TADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+ + ++WELGS LEV A +VLMLDLS+ WT+ E
Sbjct: 104 SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VVLMLDLSQPQRFWTDLE---C 155
Query: 446 KFRAIFESNESVREK-----RGSFEHFRTAD----EHRDKGLIRTFPVPLILIGGKYDLF 496
++ + ++ + + EK R E RT D +++D + P P+I++GG
Sbjct: 156 AYKGLRDTAQQMMEKVTPELREILEQ-RTVDRVGQQNKDVEKLDPLPFPVIIVGG----- 209
Query: 497 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 556
KYD+F +P ++ +CLR +AH+ G +LLF+S P L
Sbjct: 210 ------------------KYDVFSGFDPVIRKHTCRCLRSMAHLIGGALLFYSQKMPKLA 251
Query: 557 KRTRDILNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 599
K RD +NH F S H + D+N+P+ + FGTDS I T
Sbjct: 252 KVLRDTINHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWTKIGDT 296
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNF 363
+P ++ +CLR +AH+ G +LLF+S P L K RD +NH F S H +
Sbjct: 216 GFDPVIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTINHLGFGSPAHPFRSHVV 275
Query: 364 DYNKPIFVPFGTDSVASIEGT 384
D+N+P+ + FGTDS I T
Sbjct: 276 DFNEPLCIWFGTDSWTKIGDT 296
>gi|405953811|gb|EKC21400.1| Protein numb, partial [Crassostrea gigas]
Length = 1325
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 177/377 (46%), Gaps = 57/377 (15%)
Query: 47 GKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSGT---SRLEVASL 102
GK++++ RFL++++ PKPT+ALEY + R++ G + KD+ H+WELG GT +EV
Sbjct: 1 GKTSIILRFLDRDEAPKPTVALEYTFGRRAKGHNIAKDVGHIWELGGGTWLSKLMEVPLN 60
Query: 103 FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFES--NESVREKRGSFEHF- 159
+ T TL +++DLS+ + +W ET LA +A E+ E +E G E
Sbjct: 61 PDTLQHT-----TLAIVVDLSKPSEIWFTLETLLAAAKARVENILTEMKQEYPGLKEKLC 115
Query: 160 -----RTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASL 214
R +EH DK +I F +PLI+IGGKYD+F+ + V + L S
Sbjct: 116 KKAWERVGEEHSDKAMIDPFLIPLIIIGGKYDVFQAKD-------VGHIWELGGGTWLSK 168
Query: 215 LFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDS-VASIEGTTHGKD 273
L L+P D L H A+ D +KP + F ++ +A+ +
Sbjct: 169 LMEVPLNP-------DTLQHTTL------AIVVDLSKPSEIWFTLETLLAAAKARVENIL 215
Query: 274 ASLESGGRGFNRSRGMKFEKKRGW-----------------IEGTVTA-RNLEPNKKRIA 315
++ G K ++ G I G ++ + K+++
Sbjct: 216 TEMKQEYPGLKEKLHKKAWERVGEEHSDKAMIDPFLIPLIIIGGKYDVFQDFDSEKRKVI 275
Query: 316 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 375
+ LR++AH NGA+L F LV R R +++H+ F + + ++ D+NKP+ V G
Sbjct: 276 CKTLRFIAHTNGATLQFCGLKQEQLVMRMRGLISHHLFGTTMGKSLQVDHNKPLMVAAGH 335
Query: 376 DSVASIEGTTQYVTADI 392
DS+ I GT DI
Sbjct: 336 DSLQQI-GTPPLSEQDI 351
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 102/181 (56%), Gaps = 9/181 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
DK +I F +PLI+IGGKYD+F++ + K+++ + LR++AH NGA+L F LV
Sbjct: 243 DKAMIDPFLIPLIIIGGKYDVFQDFDSEKRKVICKTLRFIAHTNGATLQFCGLKQEQLVM 302
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAG-----STSSLD 825
R R +++H+ F + + ++ D+NKP+ V G DS+ I GT + + +
Sbjct: 303 RMRGLISHHLFGTTMGKSLQVDHNKPLMVAAGHDSLQQI-GTPPLSEQDIGRVHAKNPMQ 361
Query: 826 KYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQ-LDQMRREVDMKD 884
+KH FT F QDD S DP+ D Y E IDSLR+QK E ++ ++R + +
Sbjct: 362 LWKHAFTGFFPQDDIS--NPALVDDPSKDPQYQEAAIDSLRSQKDEAGMESLKRRLSFRK 419
Query: 885 K 885
K
Sbjct: 420 K 420
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 119/232 (51%), Gaps = 30/232 (12%)
Query: 387 YVTADICHLWELGSGT---SRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETF 443
+ D+ H+WELG GT +EV + T TL +++DLS+ + +W ET
Sbjct: 149 FQAKDVGHIWELGGGTWLSKLMEVPLNPDTLQHT-----TLAIVVDLSKPSEIWFTLETL 203
Query: 444 LAKFRAIFES--NESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGL 501
LA +A E+ E +E G E R +G ++ DK +
Sbjct: 204 LAAAKARVENILTEMKQEYPGLKEKLHKKAWER--------------VGEEHS---DKAM 246
Query: 502 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 561
I F +PLI+IGGKYD+F++ + K+++ + LR++AH NGA+L F LV R R
Sbjct: 247 IDPFLIPLIIIGGKYDVFQDFDSEKRKVICKTLRFIAHTNGATLQFCGLKQEQLVMRMRG 306
Query: 562 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+++H+ F + + ++ D+NKP+ V G DS+ I GT ++ ++GR H
Sbjct: 307 LISHHLFGTTMGKSLQVDHNKPLMVAAGHDSLQQI-GTPPL--SEQDIGRVH 355
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 388 VTADICHLWELGSGT---SRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 444
+ D+ H+WELG GT +EV + T TL +++DLS+ + +W ET L
Sbjct: 35 IAKDVGHIWELGGGTWLSKLMEVPLNPDTLQHT-----TLAIVVDLSKPSEIWFTLETLL 89
Query: 445 AKFRAIFES--NESVREKRGSFEHF------RTADEHRDKGLIRTFPVPLILIGGKYDLF 496
A +A E+ E +E G E R +EH DK +I F +PLI+IGGKYD+F
Sbjct: 90 AAAKARVENILTEMKQEYPGLKEKLCKKAWERVGEEHSDKAMIDPFLIPLIIIGGKYDVF 149
Query: 497 EDKGL 501
+ K +
Sbjct: 150 QAKDV 154
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 681 RTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGL 714
R +EH DK +I F +PLI+IGGKYD+F+ K +
Sbjct: 121 RVGEEHSDKAMIDPFLIPLIIIGGKYDVFQAKDV 154
>gi|24583041|ref|NP_609289.1| CG3769 [Drosophila melanogaster]
gi|22946025|gb|AAF52775.2| CG3769 [Drosophila melanogaster]
gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster]
Length = 368
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 147/280 (52%), Gaps = 30/280 (10%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQS--QERTLLLIGTKSVGKSTLVFRFLEKND-T 61
S++DIA LA + +++ + +ERT+L++G+K VGK+T + +F ++ +
Sbjct: 31 SIQDIAGRLAE------EQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84
Query: 62 PKPTLALEYIYARKSGKTVMKDICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVL 118
+PTLALEY + R+ G + ++WELGS LEV A ++L
Sbjct: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VIL 139
Query: 119 MLDLSRLNSLWTEAETFLAKFRAIFESNESVREK-----RGSFEHF---RTADEHRDKGL 170
MLDLS+ WT+ E ++ + ++ + + EK R E R +++D
Sbjct: 140 MLDLSQPQRFWTDLE---CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK 196
Query: 171 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 230
+ P P+I++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD
Sbjct: 197 LDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256
Query: 231 ILNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 268
+ H F S H + D+N+P+ + FGTDS + I T
Sbjct: 257 TICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT 296
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
P P+I++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD +
Sbjct: 200 LPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 259
Query: 778 HYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHF 835
H F S H + D+N+P+ + FGTDS + I T S+++ F
Sbjct: 260 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT-------GAQSVERIGATFGMEV 312
Query: 836 LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRT 888
Q + K K DPA D + E VID +R+QK E+L + R+V ++ K+ +
Sbjct: 313 PQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFES 365
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 44/224 (19%)
Query: 389 TADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+ + ++WELGS LEV A ++LMLDLS+ WT+ E
Sbjct: 104 SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VILMLDLSQPQRFWTDLE---C 155
Query: 446 KFRAIFESNESVREK-----RGSFEHF---RTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
++ + ++ + + EK R E R +++D + P P+I++GG
Sbjct: 156 AYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGG------ 209
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
KYD+F +P ++ +CLR +AH+ G +LLF+S P L K
Sbjct: 210 -----------------KYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252
Query: 558 RTRDILNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 599
RD + H F S H + D+N+P+ + FGTDS + I T
Sbjct: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT 296
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNF 363
+P ++ +CLR +AH+ G +LLF+S P L K RD + H F S H +
Sbjct: 216 GFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV 275
Query: 364 DYNKPIFVPFGTDSVASIEGT 384
D+N+P+ + FGTDS + I T
Sbjct: 276 DFNEPLCIWFGTDSWSKIGDT 296
>gi|198476047|ref|XP_001357246.2| GA17674 [Drosophila pseudoobscura pseudoobscura]
gi|198137522|gb|EAL34315.2| GA17674 [Drosophila pseudoobscura pseudoobscura]
Length = 369
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 148/279 (53%), Gaps = 27/279 (9%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQS--QERTLLLIGTKSVGKSTLVFRFLEKND-T 61
S++DIA LA + + +++ S +ERTLL++G+K VGKST + +F ++ + T
Sbjct: 31 SIQDIAGRLAEEQQ------RLRQLEATSMPKERTLLVLGSKCVGKSTAINKFFDREEHT 84
Query: 62 PKPTLALEYIYARKSGKTVMKDICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVL 118
+PTLALEY + R+ G + ++WELGS LEV A + +
Sbjct: 85 TRPTLALEYSFGRRIGSGRSPQVINVWELGSLDNADQLLEVPMRTHGLQQLA-----VFI 139
Query: 119 MLDLSRLNSLWTEAETFLAKFRAIFES--NESVREKRGSFEHFRTADE--HRDK---GLI 171
M+DLS+ WT+ E R + E R + E RT + H++K G +
Sbjct: 140 MVDLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLEQ-RTLERVGHQNKEDLGTL 198
Query: 172 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 231
P P++++GGKYD+F L+P+ K+ +CLR +AH G +LLF+S P L K RD
Sbjct: 199 ELLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGALLFYSQKVPKLSKVLRDT 258
Query: 232 LNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASIEGT 268
++H F SH + D+N+P+ V FGTDS + I T
Sbjct: 259 ISHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDT 297
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
ED G + P P++++GGKYD+F L+P+ K+ +CLR +AH G +LLF+S P L
Sbjct: 193 EDLGTLELLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGALLFYSQKVPKLS 252
Query: 770 KRTRDILNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKY 827
K RD ++H F SH + D+N+P+ V FGTDS + I T S+++
Sbjct: 253 KVLRDTISHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDT-------GAQSVERI 305
Query: 828 KHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYR 887
F Q + + DPA D + E +ID +R QK E+L + R+V ++ K+
Sbjct: 306 GATFGVAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRDVLLRGKFE 365
Query: 888 T 888
+
Sbjct: 366 S 366
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 389 TADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+ + ++WELGS LEV A + +M+DLS+ WT+ E
Sbjct: 104 SPQVINVWELGSLDNADQLLEVPMRTHGLQQLA-----VFIMVDLSQPQRFWTDLECAYK 158
Query: 446 KFRAIFES--NESVREKRGSFEHFRTADE--HRDKGLIRTFPVPLILIGGKYDLFEDKGL 501
R + E R + E RT + H++K ED G
Sbjct: 159 GLRVTSQELLARMTPELRETLEQ-RTLERVGHQNK--------------------EDLGT 197
Query: 502 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 561
+ P P++++GGKYD+F L+P+ K+ +CLR +AH G +LLF+S P L K RD
Sbjct: 198 LELLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGALLFYSQKVPKLSKVLRD 257
Query: 562 ILNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASIEGT 599
++H F SH + D+N+P+ V FGTDS + I T
Sbjct: 258 TISHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDT 297
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 307 LEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS--SHLASAVNFD 364
L+P+ K+ +CLR +AH G +LLF+S P L K RD ++H F SH + D
Sbjct: 218 LDPSLKKAICRCLRSMAHHIGGALLFYSQKVPKLSKVLRDTISHMGFGSPSHPFRSHVTD 277
Query: 365 YNKPIFVPFGTDSVASIEGT 384
+N+P+ V FGTDS + I T
Sbjct: 278 HNEPLSVWFGTDSWSRIGDT 297
>gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster]
Length = 358
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 134/249 (53%), Gaps = 22/249 (8%)
Query: 34 QERTLLLIGTKSVGKSTLVFRFLEKND-TPKPTLALEYIYARKSGKTVMKDICHLWELGS 92
+ERT+L++G+K VGK+T + +F ++ + +PTLALEY + R+ G + ++WELGS
Sbjct: 46 KERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 105
Query: 93 ---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESV 149
LEV A ++LMLDLS+ WT+ E ++ + ++ + +
Sbjct: 106 LDNAEQLLEVPMRTHGLQQLA-----VILMLDLSQPQRFWTDLE---CAYKGLRDTAQQM 157
Query: 150 REK-----RGSFEHF---RTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQ 201
EK R E R +++D + P P+I++GGKYD+F +P ++ +
Sbjct: 158 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 217
Query: 202 CLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNFDYNKPIFVPFGT 259
CLR +AH+ G +LLF+S P L K RD + H F S H + D+N+P+ + FGT
Sbjct: 218 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 277
Query: 260 DSVASIEGT 268
DS + I T
Sbjct: 278 DSWSKIGDT 286
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
P P+I++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD +
Sbjct: 190 LPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 249
Query: 778 HYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHF 835
H F S H + D+N+P+ + FGTDS + I T S+++ F
Sbjct: 250 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT-------GAQSVERIGATFGMEV 302
Query: 836 LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRT 888
Q + K K DPA D + E VID +R+QK E+L + R+V ++ K+ +
Sbjct: 303 PQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFES 355
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 44/224 (19%)
Query: 389 TADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+ + ++WELGS LEV A ++LMLDLS+ WT+ E
Sbjct: 94 SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VILMLDLSQPQRFWTDLE---C 145
Query: 446 KFRAIFESNESVREK-----RGSFEHF---RTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
++ + ++ + + EK R E R +++D + P P+I++GG
Sbjct: 146 AYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGG------ 199
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
KYD+F +P ++ +CLR +AH+ G +LLF+S P L K
Sbjct: 200 -----------------KYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 242
Query: 558 RTRDILNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 599
RD + H F S H + D+N+P+ + FGTDS + I T
Sbjct: 243 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT 286
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 308 EPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNFDY 365
+P ++ +CLR +AH+ G +LLF+S P L K RD + H F S H + D+
Sbjct: 208 DPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDF 267
Query: 366 NKPIFVPFGTDSVASIEGT 384
N+P+ + FGTDS + I T
Sbjct: 268 NEPLCIWFGTDSWSKIGDT 286
>gi|326432119|gb|EGD77689.1| hypothetical protein PTSG_08780 [Salpingoeca sp. ATCC 50818]
Length = 379
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 135/247 (54%), Gaps = 30/247 (12%)
Query: 33 SQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGK---TVMKDICHLWE 89
++ERT+L +G++S GKST++ RFL++ PKPT+ALEY + R++ T +K H
Sbjct: 69 AEERTVLFVGSQSGGKSTMILRFLDREVAPKPTVALEYTFGRRARGHDLTAIKRAPH--- 125
Query: 90 LGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIF------ 143
S + V+ S +VL++DLS+ LWT +E L+ R
Sbjct: 126 --PSASDVSVSQRIRSL--------CVVLVVDLSQPQQLWTTSEALLSSVRRRIDKVIDD 175
Query: 144 ----ESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIA 199
ES K+ S + D+H D +I+ VPL+++G KYD+F+N + +++
Sbjct: 176 LNRRESKLPAYLKKKSVSRY--GDDHPDLPMIQPLLVPLLIVGTKYDVFQNFDSERRKTI 233
Query: 200 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL-ASAVNFDYNKPIFVPFG 258
+ LR+LAH +G SL+F +S + L+ R R L ++AF + +FD+NKP+ +P G
Sbjct: 234 ARTLRFLAHFHGGSLIF-TSQEESLMVRCRAQLANFAFKIPFNVRSAHFDHNKPLLIPVG 292
Query: 259 TDSVASI 265
DS+ SI
Sbjct: 293 ADSLESI 299
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D +I+ VPL+++G KYD+F+N + +++ + LR+LAH +G SL+F +S + L+
Sbjct: 201 DLPMIQPLLVPLLIVGTKYDVFQNFDSERRKTIARTLRFLAHFHGGSLIF-TSQEESLMV 259
Query: 771 RTRDILNHYAFSSHL-ASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSS---LDK 826
R R L ++AF + +FD+NKP+ +P G DS+ SI Q + S+ L
Sbjct: 260 RCRAQLANFAFKIPFNVRSAHFDHNKPLLIPVGADSLESIGAPPQAAGQAALSARTPLGL 319
Query: 827 YKHIFTTHFLQD--DPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMK 883
+K FT F QD D + ++ DPA D Y EP ID R +K+++L++ +R D +
Sbjct: 320 WKGAFTEIFPQDGVDMDRPEADDKTDPAQDTRYKEPAIDEARQRKMQELERYKRHADRR 378
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 421 GFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIR 480
+VL++DLS+ LWT +E L+ R R D+ D R
Sbjct: 139 SLCVVLVVDLSQPQQLWTTSEALLSSVR-------------------RRIDKVIDDLNRR 179
Query: 481 TFPVPLIL----IGGKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRY 536
+P L + D D +I+ VPL+++G KYD+F+N + +++ + LR+
Sbjct: 180 ESKLPAYLKKKSVSRYGDDHPDLPMIQPLLVPLLIVGTKYDVFQNFDSERRKTIARTLRF 239
Query: 537 LAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL-ASAVNFDYNKPIFVPFGTDSVAS 595
LAH +G SL+F +S + L+ R R L ++AF + +FD+NKP+ +P G DS+ S
Sbjct: 240 LAHFHGGSLIF-TSQEESLMVRCRAQLANFAFKIPFNVRSAHFDHNKPLLIPVGADSLES 298
Query: 596 I 596
I
Sbjct: 299 I 299
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL-ASAVNF 363
+N + +++ + LR+LAH +G SL+F +S + L+ R R L ++AF + +F
Sbjct: 223 QNFDSERRKTIARTLRFLAHFHGGSLIF-TSQEESLMVRCRAQLANFAFKIPFNVRSAHF 281
Query: 364 DYNKPIFVPFGTDSVASI 381
D+NKP+ +P G DS+ SI
Sbjct: 282 DHNKPLLIPVGADSLESI 299
>gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis]
Length = 359
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 135/259 (52%), Gaps = 19/259 (7%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
ERT+ L+G+K+ GK++++ + L++++ KPTLALEY + R++ G KDI H+WELG G
Sbjct: 34 ERTVFLMGSKAGGKTSILLKCLDRDEPSKPTLALEYTFGRRARGHNTPKDIAHIWELGGG 93
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREK 152
T ++ + +S L +++L++DLS+ N LW E L +A E S+ +K
Sbjct: 94 TFLSDLVQIPITSADL---KFLSVILIVDLSKPNELWGTTEKLLQVTQAHLEKAFSMAQK 150
Query: 153 RGSFEHFRT------------ADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAV 200
+ + T ++ D+ LI FPVPL+++G KYD+F+ + +KK++
Sbjct: 151 AQTAKPAATHQTATQSAARVLPADYPDRELISAFPVPLLIVGSKYDIFQEFDSDKKKLIA 210
Query: 201 QCLRYLAHVNGASLL-FHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 259
Q LR++AH ASL+ H V+ D KP+ +P G+
Sbjct: 211 QMLRFVAHSYAASLIVIHQXXXXXXXXXXXXXXXXXXXXXXXXKTVSMDLTKPLIIPAGS 270
Query: 260 DSVASIEGTTHGKDASLES 278
DS + I G+ D + S
Sbjct: 271 DSFSQI-GSPCAADVDIAS 288
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H+WELG GT ++ + +S L +++L++DLS+ N LW E L +A
Sbjct: 83 DIAHIWELGGGTFLSDLVQIPITSADL---KFLSVILIVDLSKPNELWGTTEKLLQVTQA 139
Query: 450 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPL 509
E S+ +K + + T + + R P + D+ LI FPVPL
Sbjct: 140 HLEKAFSMAQKAQTAKPAAT-HQTATQSAARVLPAD----------YPDRELISAFPVPL 188
Query: 510 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLL-FHSSLDPGLVKRTRDILNHYAF 568
+++G KYD+F+ + +KK++ Q LR++AH ASL+ H
Sbjct: 189 LIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXXXXXXXXXXXXXXX 248
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
V+ D KP+ +P G+DS + I AD ++ H
Sbjct: 249 XXXXXKTVSMDLTKPLIIPAGSDSFSQIGSP---CAADVDIASLH 290
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 709 FEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLL-FHSSLDPG 767
+ D+ LI FPVPL+++G KYD+F+ + +KK++ Q LR++AH ASL+ H
Sbjct: 175 YPDRELISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXX 234
Query: 768 LVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI----EGTTQYVTAGSTSS 823
V+ D KP+ +P G+DS + I + + +
Sbjct: 235 XXXXXXXXXXXXXXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNP 294
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
D ++ + F P + + DPA D YSEP ID++R QK ++L+Q +R
Sbjct: 295 KDLWRKVCGCVF---PPEKEHQQDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKR 346
>gi|195116767|ref|XP_002002923.1| GI17639 [Drosophila mojavensis]
gi|193913498|gb|EDW12365.1| GI17639 [Drosophila mojavensis]
Length = 372
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 133/250 (53%), Gaps = 30/250 (12%)
Query: 34 QERTLLLIGTKSVGKSTLVFRFLEKND-TPKPTLALEYIYARKSGKTVMKDICHLWELGS 92
+ERTL ++G+K VGKS + RF ++ + T +PT+ALEY Y R+ G + ++WELGS
Sbjct: 57 KERTLFVLGSKCVGKSMAINRFFDREEQTTRPTMALEYSYGRRMGSGRHAQVLNVWELGS 116
Query: 93 ---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFR-----AIFE 144
LEV + L S F +M+DLS+ +W + E R + +
Sbjct: 117 LDNAEQLLEVP--MRTHGLQQMSAF---IMIDLSQPQRVWADLECAYRGLRDTASRMLQQ 171
Query: 145 SNESVRE--KRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQC 202
+ +RE +R S E + A + D + P P++L+GGKYD+F + EP K+ +C
Sbjct: 172 ATPQLREYLERRSLERVKHAQQ--DLSTLDLLPFPVVLVGGKYDIFMDFEPALKKHMCRC 229
Query: 203 LRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS-------HLASAVNFDYNKPIFV 255
LR +AH+ G ++LF+S P L K RD ++H F S H+ DYN+ + +
Sbjct: 230 LRSMAHLIGGAVLFYSHKLPKLSKVLRDTISHLGFGSPTNPFRGHVT-----DYNEALSI 284
Query: 256 PFGTDSVASI 265
FGTDS A I
Sbjct: 285 WFGTDSWAQI 294
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 16/188 (8%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D + P P++L+GGKYD+F + EP K+ +CLR +AH+ G ++LF+S P L
Sbjct: 193 QDLSTLDLLPFPVVLVGGKYDIFMDFEPALKKHMCRCLRSMAHLIGGAVLFYSHKLPKLS 252
Query: 770 KRTRDILNHYAFSS-------HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTS 822
K RD ++H F S H+ DYN+ + + FGTDS A I G + AG
Sbjct: 253 KVLRDTISHLGFGSPTNPFRGHVT-----DYNEALSIWFGTDSWAQI-GIGEM--AGRW- 303
Query: 823 SLDKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDM 882
S+++ + Q + K + DPA D + E +ID +R QK E+L + R++++
Sbjct: 304 SVERIGATLSVEVPQLQLEKQKQQLPQDPAKDAGFKESIIDDMRAQKDEELAAILRDLNL 363
Query: 883 KDKYRTRV 890
+ K+ + +
Sbjct: 364 RGKFESVI 371
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 52/224 (23%)
Query: 390 ADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
A + ++WELGS LEV + L S F +M+DLS+ +W + E
Sbjct: 106 AQVLNVWELGSLDNAEQLLEVP--MRTHGLQQMSAF---IMIDLSQPQRVWADLECAYRG 160
Query: 447 FR-----AIFESNESVRE--KRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDK 499
R + ++ +RE +R S E + A + D + P P++L+GGKYD+F D
Sbjct: 161 LRDTASRMLQQATPQLREYLERRSLERVKHAQQ--DLSTLDLLPFPVVLVGGKYDIFMD- 217
Query: 500 GLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRT 559
EP K+ +CLR +AH+ G ++LF+S P L K
Sbjct: 218 ----------------------FEPALKKHMCRCLRSMAHLIGGAVLFYSHKLPKLSKVL 255
Query: 560 RDILNHYAFSS-------HLASAVNFDYNKPIFVPFGTDSVASI 596
RD ++H F S H+ DYN+ + + FGTDS A I
Sbjct: 256 RDTISHLGFGSPTNPFRGHVT-----DYNEALSIWFGTDSWAQI 294
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 12/83 (14%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS-------HLA 358
+ EP K+ +CLR +AH+ G ++LF+S P L K RD ++H F S H+
Sbjct: 217 DFEPALKKHMCRCLRSMAHLIGGAVLFYSHKLPKLSKVLRDTISHLGFGSPTNPFRGHVT 276
Query: 359 SAVNFDYNKPIFVPFGTDSVASI 381
DYN+ + + FGTDS A I
Sbjct: 277 -----DYNEALSIWFGTDSWAQI 294
>gi|449669530|ref|XP_002164541.2| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Hydra magnipapillata]
Length = 368
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 147/277 (53%), Gaps = 22/277 (7%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
KSL +IA+E K + + D ++ E +L G+K GK+T++ +F+EK+D+ K
Sbjct: 11 KSLWEIALE---EKQINTKNITKGNDDNETTESHVLFCGSKDSGKTTIIQKFIEKDDSVK 67
Query: 64 PTLALEYIY---ARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLML 120
PT+AL+Y AR++ T +DI H+WEL G+S +++ + TLV++L
Sbjct: 68 PTVALDYCIFRRARQNSTTSNRDIVHVWELAGGSSTVKMIDIIIKPDNILM--LTLVMVL 125
Query: 121 DLSRLNSLWTEAETFLAKFR----------AIFESNESVREKRGSFEHFRTADEHRDKGL 170
DLS +W +++ + A SN + +FE R +++D L
Sbjct: 126 DLSNPAEIWQVQHVLISQIKQRIKNVITELAKVNSNIEKLLTQKAFE--RIGFQNKDNKL 183
Query: 171 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 230
+ VPL+++G KY+ F+ + K+++ + LR++A+ NGA + F S+ GL + +
Sbjct: 184 VSPLLVPLVIVGSKYEQFQLMTSEKRQMVCKALRFIAYTNGACIQFFSTKTEGLNGKLKS 243
Query: 231 ILNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASI 265
LN + ++ +FD NKP++VPFG DS+ I
Sbjct: 244 FLNQLISNGLQSISKTPSFDINKPLYVPFGCDSLEQI 280
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 102/183 (55%), Gaps = 11/183 (6%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D L+ VPL+++G KY+ F+ + K+++ + LR++A+ NGA + F S+ GL
Sbjct: 179 KDNKLVSPLLVPLVIVGSKYEQFQLMTSEKRQMVCKALRFIAYTNGACIQFFSTKTEGLN 238
Query: 770 KRTRDILNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASIEG----TTQYVTAGSTSS 823
+ + LN + ++ +FD NKP++VPFG DS+ I Q + +S
Sbjct: 239 GKLKSFLNQLISNGLQSISKTPSFDINKPLYVPFGCDSLEQIGAPPVSPEQLARSTQSSP 298
Query: 824 LDKYKHIFTTHFLQDDPSQNKSK-SAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDM 882
+D +K + F P++N+ K +PA+D+N+S+ ID LR K ++LD+ R+ +
Sbjct: 299 VDLWKDTYKAFF----PTENEDKLKILNPAIDKNFSDITIDKLRLLKDQELDRYRKSGER 354
Query: 883 KDK 885
KDK
Sbjct: 355 KDK 357
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 39/218 (17%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFR-- 448
DI H+WEL G+S +++ + TLV++LDLS +W +++ +
Sbjct: 90 DIVHVWELAGGSSTVKMIDIIIKPDNILM--LTLVMVLDLSNPAEIWQVQHVLISQIKQR 147
Query: 449 --------AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKG 500
A SN + +FE R +++D L+ VPL+++
Sbjct: 148 IKNVITELAKVNSNIEKLLTQKAFE--RIGFQNKDNKLVSPLLVPLVIV----------- 194
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 560
G KY+ F+ + K+++ + LR++A+ NGA + F S+ GL + +
Sbjct: 195 ------------GSKYEQFQLMTSEKRQMVCKALRFIAYTNGACIQFFSTKTEGLNGKLK 242
Query: 561 DILNHYAFS--SHLASAVNFDYNKPIFVPFGTDSVASI 596
LN + ++ +FD NKP++VPFG DS+ I
Sbjct: 243 SFLNQLISNGLQSISKTPSFDINKPLYVPFGCDSLEQI 280
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 311 KKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS--SHLASAVNFDYNKP 368
K+++ + LR++A+ NGA + F S+ GL + + LN + ++ +FD NKP
Sbjct: 208 KRQMVCKALRFIAYTNGACIQFFSTKTEGLNGKLKSFLNQLISNGLQSISKTPSFDINKP 267
Query: 369 IFVPFGTDSVASI 381
++VPFG DS+ I
Sbjct: 268 LYVPFGCDSLEQI 280
>gi|195397927|ref|XP_002057579.1| GJ18204 [Drosophila virilis]
gi|194141233|gb|EDW57652.1| GJ18204 [Drosophila virilis]
Length = 371
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 145/274 (52%), Gaps = 23/274 (8%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKND-TPK 63
S+++IA LA + ++ +ERTL ++G+K VGKST + +F ++++ T +
Sbjct: 31 SIQEIAGRLAEEQE---RLRQLEAASTAPKERTLFVLGSKGVGKSTAINKFFDRDEHTTR 87
Query: 64 PTLALEYIYARKSGKTVMKDICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLML 120
PT+ALEY Y R++G + ++WELGS LEV + L S F ++
Sbjct: 88 PTMALEYSYGRRTGTGRSAQVLNVWELGSLDNAEQLLEVP--MRTHGLQQLSVFVVI--- 142
Query: 121 DLSRLNSLWTEAETFLAKFRAIFE-----SNESVRE--KRGSFEHFRTADEHRDKGLIRT 173
DLS+ +W + E R + + +RE +R S E R +D G +
Sbjct: 143 DLSQPQRVWADVERAYKGLRDTAQRLMQLAAPQLREDMERRSLE--RVKHVKQDLGTLDL 200
Query: 174 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 233
P P++L+GGKYD+F + EP K+ +CLR +AH+ G ++LF+S P L K RD ++
Sbjct: 201 LPFPVVLVGGKYDVFMDFEPALKKHICRCLRSMAHLVGGAVLFYSQSVPKLAKVLRDTIS 260
Query: 234 HYAFSS--HLASAVNFDYNKPIFVPFGTDSVASI 265
H F S + A DYN+ + + FGTDS + I
Sbjct: 261 HLGFGSPTNPFRAHVTDYNEALSIWFGTDSWSQI 294
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 7/181 (3%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D G + P P++L+GGKYD+F + EP K+ +CLR +AH+ G ++LF+S P L
Sbjct: 193 QDLGTLDLLPFPVVLVGGKYDVFMDFEPALKKHICRCLRSMAHLVGGAVLFYSQSVPKLA 252
Query: 770 KRTRDILNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKY 827
K RD ++H F S + A DYN+ + + FGTDS + I + S+++
Sbjct: 253 KVLRDTISHLGFGSPTNPFRAHVTDYNEALSIWFGTDSWSQI-----GIGESDRLSVERI 307
Query: 828 KHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYR 887
+ Q + K + DPA D + E +ID LR K E+L + R++ ++ K+
Sbjct: 308 GATLSVQVPQLQLEKQKQELPQDPARDVGFRESLIDDLRAHKDEELAAIMRDLTLRGKFE 367
Query: 888 T 888
+
Sbjct: 368 S 368
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 389 TADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+A + ++WELGS LEV + L S F ++ DLS+ +W + E
Sbjct: 105 SAQVLNVWELGSLDNAEQLLEVP--MRTHGLQQLSVFVVI---DLSQPQRVWADVERAYK 159
Query: 446 KFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTF 505
R + + R + + R E R ++ +D G +
Sbjct: 160 GLR-----DTAQRLMQLAAPQLREDMERRSLERVKHVK-------------QDLGTLDLL 201
Query: 506 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 565
P P++L+GGKYD+F + EP K+ +CLR +AH+ G ++LF+S P L K RD ++H
Sbjct: 202 PFPVVLVGGKYDVFMDFEPALKKHICRCLRSMAHLVGGAVLFYSQSVPKLAKVLRDTISH 261
Query: 566 YAFSS--HLASAVNFDYNKPIFVPFGTDSVASI 596
F S + A DYN+ + + FGTDS + I
Sbjct: 262 LGFGSPTNPFRAHVTDYNEALSIWFGTDSWSQI 294
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNF 363
+ EP K+ +CLR +AH+ G ++LF+S P L K RD ++H F S + A
Sbjct: 217 DFEPALKKHICRCLRSMAHLVGGAVLFYSQSVPKLAKVLRDTISHLGFGSPTNPFRAHVT 276
Query: 364 DYNKPIFVPFGTDSVASI 381
DYN+ + + FGTDS + I
Sbjct: 277 DYNEALSIWFGTDSWSQI 294
>gi|355565658|gb|EHH22087.1| hypothetical protein EGK_05283, partial [Macaca mulatta]
gi|355751279|gb|EHH55534.1| hypothetical protein EGM_04762, partial [Macaca fascicularis]
Length = 351
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 138/246 (56%), Gaps = 22/246 (8%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVM-----KDICHLWE 89
E+++ IG+K+ GK+T++ R L D+ + + K K+ M KDI H WE
Sbjct: 29 EKSVFFIGSKNGGKTTIILRCL---DSYYWQVLMTCKKYLKFKKSKMFVFQPKDIAHFWE 85
Query: 90 LGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA------- 141
LG GTS L++ S+ +S +L F+LVL+LDLS+ N LW E L ++
Sbjct: 86 LGGGTSLLDLISVPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKMIM 142
Query: 142 -IFESN-ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIA 199
+ ++N ++ E R + D +D+ LI FPVPL++IG KYD+F++ E K+++
Sbjct: 143 KLGKTNPKAASEMRQKIWNNMQKDHPQDRELIDPFPVPLVIIGSKYDIFQDFESEKRKVI 202
Query: 200 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 259
+ LR++AH GASL+F S + L+ + R ++N AF + ++ D NKP+F+ G
Sbjct: 203 CKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGL 261
Query: 260 DSVASI 265
DS + I
Sbjct: 262 DSFSQI 267
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 22/224 (9%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F+LVL+LDLS+ N LW E L +A
Sbjct: 79 DIAHFWELGGGTSLLDLISVPITSDTLRT---FSLVLVLDLSKPNDLWPTMENLL---QA 132
Query: 450 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPL 509
+ + K G + + A E R K I + D +D+ LI FPVPL
Sbjct: 133 TKSHVDKMIMKLGK-TNPKAASEMRQK----------IWNNMQKDHPQDRELIDPFPVPL 181
Query: 510 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 569
++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 182 VIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFG 240
Query: 570 SHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+ ++ D NKP+F+ G DS + I + ++G+ H
Sbjct: 241 IDKSKSICVDQNKPLFITAGLDSFSQIGSPP---VPENDIGKLH 281
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 11/175 (6%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D+ LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 169 QDRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALL 227
Query: 770 KRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSS 823
+ R ++N AF + ++ D NKP+F+ G DS + I E + A S
Sbjct: 228 LKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFSQIGSPPVPENDIGKLHAHSPME 287
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
L +K ++ F S N K+ DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 288 L--WKKVYEKLF--PPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS + I G+ DI L
Sbjct: 251 QNKPLFITAGLDSFSQI-GSPPVPENDIGKL 280
>gi|256083705|ref|XP_002578080.1| hypothetical protein [Schistosoma mansoni]
gi|353231630|emb|CCD78048.1| hypothetical protein Smp_159340 [Schistosoma mansoni]
Length = 337
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 126/231 (54%), Gaps = 16/231 (6%)
Query: 47 GKSTLVFRFLEKNDTPKPTLALEYIYARK-SGKTVMKDICHLWELGSGTSRLEVASLFSS 105
GKST++ RFLEK++TPK TLAL+Y + RK +G + + H+WELG G ++ +
Sbjct: 40 GKSTIINRFLEKDETPKSTLALDYTFGRKGAGNYHTRVVSHIWELGGGVKLSDLIGVV-- 97
Query: 106 FSLTAQS--GFTLVLMLDLSRLNSLWTEAETFLAKFRAIFES------NESVREKRGSFE 157
+T + L+L++DLS+ LW ET L A + +++ + F
Sbjct: 98 --MTPNNILNLHLILVIDLSKPEELWDTVETLLKSASARVDQILNRLHQKNITRIQNIFS 155
Query: 158 H---FRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASL 214
R + H D L+ FP+PL +G K+D+ + ++ + + +R+L+H GAS+
Sbjct: 156 EKSRNRISSTHPDTELLNPFPLPLTFLGTKHDILMTRDAEQQNLICKTIRFLSHYYGASV 215
Query: 215 LFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
F S+ + G++KR R +LNH AF+ S V + KP+ +P G DS ++I
Sbjct: 216 YFSSTKEDGVLKRIRAVLNHIAFNGKDLSNVQMETGKPLAIPVGVDSFSNI 266
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 19/169 (11%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D L+ FP+PL +G K+D+ + ++ + + +R+L+H GAS+ F S+ + G++K
Sbjct: 168 DTELLNPFPLPLTFLGTKHDILMTRDAEQQNLICKTIRFLSHYYGASVYFSSTKEDGVLK 227
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHI 830
R R +LNH AF+ S V + KP+ +P G DS ++I Y+ +G T SL+
Sbjct: 228 RIRAVLNHIAFNGKDLSNVQMETGKPLAIPVGVDSFSNI--GNHYLKSGLTFSLNN---- 281
Query: 831 FTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRRE 879
T H + DP+ D YSEP+IDS R K E+L+ RR+
Sbjct: 282 ITNHLI-------------DPSKDPQYSEPLIDSARKVKDEELESKRRQ 317
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 382 EGTTQYVTADICHLWELGSGTSRLEVASLFSSFSLTAQS--GFTLVLMLDLSRLNSLWTE 439
+G Y T + H+WELG G ++ + +T + L+L++DLS+ LW
Sbjct: 68 KGAGNYHTRVVSHIWELGGGVKLSDLIGVV----MTPNNILNLHLILVIDLSKPEELWDT 123
Query: 440 AETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDK 499
ET L A + + ++ E + T P D
Sbjct: 124 VETLLKSASARVDQILNRLHQKNITRIQNIFSEKSRNRISSTHP--------------DT 169
Query: 500 GLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRT 559
L+ FP+PL +G K+D+ + ++ + + +R+L+H GAS+ F S+ + G++KR
Sbjct: 170 ELLNPFPLPLTFLGTKHDILMTRDAEQQNLICKTIRFLSHYYGASVYFSSTKEDGVLKRI 229
Query: 560 RDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
R +LNH AF+ S V + KP+ +P G DS ++I
Sbjct: 230 RAVLNHIAFNGKDLSNVQMETGKPLAIPVGVDSFSNI 266
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%)
Query: 308 EPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNK 367
+ ++ + + +R+L+H GAS+ F S+ + G++KR R +LNH AF+ S V + K
Sbjct: 193 DAEQQNLICKTIRFLSHYYGASVYFSSTKEDGVLKRIRAVLNHIAFNGKDLSNVQMETGK 252
Query: 368 PIFVPFGTDSVASI 381
P+ +P G DS ++I
Sbjct: 253 PLAIPVGVDSFSNI 266
>gi|194858996|ref|XP_001969301.1| GG25350 [Drosophila erecta]
gi|190661168|gb|EDV58360.1| GG25350 [Drosophila erecta]
Length = 352
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 22/249 (8%)
Query: 34 QERTLLLIGTKSVGKSTLVFRFLEKND-TPKPTLALEYIYARKSGKTVMKDICHLWELGS 92
+ERTLL++G+K VGK+T + RF ++ + +PTLALEY + R+ G + ++WELGS
Sbjct: 40 KERTLLVLGSKCVGKTTAINRFFDREEHATRPTLALEYSFGRRIGSGKSPQVLNVWELGS 99
Query: 93 ---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESV 149
LEV A +V+MLDLS+ WT+ E ++ + ++ + +
Sbjct: 100 LDNAEQLLEVPMRTHGLQQLA-----VVIMLDLSQPQRFWTDLE---CAYKGLRDTAQQM 151
Query: 150 REK-----RGSFEHF---RTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQ 201
EK R E R ++D P P++++GGKYD+F +P ++ +
Sbjct: 152 MEKLTPELREILEQRTMERVCKLNKDVEKPDPLPFPVVIVGGKYDVFSGFDPAIRKHTCR 211
Query: 202 CLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNFDYNKPIFVPFGT 259
CLR +AH+ G +LLF+S P L K RD ++H F S H + D+N+P+ + FG
Sbjct: 212 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTISHLGFGSPAHPFRSHVVDFNEPLCIWFGM 271
Query: 260 DSVASIEGT 268
DS + I T
Sbjct: 272 DSWSKIGDT 280
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
P P++++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD ++
Sbjct: 184 LPFPVVIVGGKYDVFSGFDPAIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIS 243
Query: 778 HYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHF 835
H F S H + D+N+P+ + FG DS + I T S+++ F
Sbjct: 244 HLGFGSPAHPFRSHVVDFNEPLCIWFGMDSWSKIGDT-------GAQSVERIGATFGVEV 296
Query: 836 LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRT 888
Q + K + DPA D + E +ID +R+QK E+L + R+V ++ K+ +
Sbjct: 297 PQLQLEKQKLQETTDPAKDPGFKESLIDEMRSQKNEELAGLMRDVLLRGKFES 349
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 28/216 (12%)
Query: 389 TADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+ + ++WELGS LEV A +V+MLDLS+ WT+ E
Sbjct: 88 SPQVLNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VVIMLDLSQPQRFWTDLE---C 139
Query: 446 KFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTF 505
++ + ++ + + EK R E R + L +D
Sbjct: 140 AYKGLRDTAQQMMEKLTP--ELREILEQRTMERV-------------CKLNKDVEKPDPL 184
Query: 506 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 565
P P++++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD ++H
Sbjct: 185 PFPVVIVGGKYDVFSGFDPAIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTISH 244
Query: 566 YAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 599
F S H + D+N+P+ + FG DS + I T
Sbjct: 245 LGFGSPAHPFRSHVVDFNEPLCIWFGMDSWSKIGDT 280
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNF 363
+P ++ +CLR +AH+ G +LLF+S P L K RD ++H F S H +
Sbjct: 200 GFDPAIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTISHLGFGSPAHPFRSHVV 259
Query: 364 DYNKPIFVPFGTDSVASIEGT 384
D+N+P+ + FG DS + I T
Sbjct: 260 DFNEPLCIWFGMDSWSKIGDT 280
>gi|195438323|ref|XP_002067086.1| GK24206 [Drosophila willistoni]
gi|194163171|gb|EDW78072.1| GK24206 [Drosophila willistoni]
Length = 356
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 150/279 (53%), Gaps = 25/279 (8%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQS--QERTLLLIGTKSVGKSTLVFRFLEKND-T 61
S++DIA +LA + + +++ S +E+TL ++G+K VGKST + +F ++ D +
Sbjct: 16 SIQDIAGKLAEEQQ------RLRQLEATSMPREKTLFVLGSKCVGKSTAISKFFDREDLS 69
Query: 62 PKPTLALEYIYARKSGKTVMK--DICHLWELGSGTSRLEVASLFSSFSLTAQ--SGFTLV 117
+PTLALEY + R+ G + + ++WELGS L+ A + +
Sbjct: 70 TRPTLALEYSFGRRMGNGSGRSAQVLNVWELGS----LDNAEQLLDVPMRTHGLQQLAVF 125
Query: 118 LMLDLSRLNSLWTEAETFLAKFR-----AIFESNESVREKRGSFEHFRTADEHR-DKGLI 171
+MLDLS+ +WT+ E R + +++ +V+E R +H+ D +
Sbjct: 126 IMLDLSQPQRVWTDLECAYKGLRETANHMLEQASPAVKETLEQRSLERIGQQHQGDLITL 185
Query: 172 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 231
P P++++GGKYD+F +L+P K+ +CLR +AH+ G ++LF+S P L K RD
Sbjct: 186 DLLPFPVVIVGGKYDIFMDLDPALKKHICRCLRSMAHLIGGAVLFYSQKLPKLAKVLRDT 245
Query: 232 LNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 268
++H F S H A DYN+ + + FGTDS + I T
Sbjct: 246 ISHLGFGSPAHPFRAHVTDYNEALSIWFGTDSWSKISDT 284
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
P P++++GGKYD+F +L+P K+ +CLR +AH+ G ++LF+S P L K RD ++
Sbjct: 188 LPFPVVIVGGKYDIFMDLDPALKKHICRCLRSMAHLIGGAVLFYSQKLPKLAKVLRDTIS 247
Query: 778 HYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHF 835
H F S H A DYN+ + + FGTDS + I T S+++
Sbjct: 248 HLGFGSPAHPFRAHVTDYNEALSIWFGTDSWSKISDT-------GALSIERIGATLGVEV 300
Query: 836 LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRT 888
Q + + + +PA D + E VID +R QK E+L + R+V ++ K+ +
Sbjct: 301 PQLQLEKQQQQLPQNPAKDAGFREAVIDEMRAQKDEELSGIMRDVLLRGKFES 353
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 37/221 (16%)
Query: 389 TADICHLWELGSGTSRLEVASLFSSFSLTAQ--SGFTLVLMLDLSRLNSLWTEAETFLAK 446
+A + ++WELGS L+ A + + +MLDLS+ +WT+ E
Sbjct: 91 SAQVLNVWELGS----LDNAEQLLDVPMRTHGLQQLAVFIMLDLSQPQRVWTDLECAYKG 146
Query: 447 FR-----AIFESNESVREKRGSFEHFRTADEHR-DKGLIRTFPVPLILIGGKYDLFEDKG 500
R + +++ +V+E R +H+ D + P P++++GGKYD+F D
Sbjct: 147 LRETANHMLEQASPAVKETLEQRSLERIGQQHQGDLITLDLLPFPVVIVGGKYDIFMD-- 204
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 560
L+P K+ +CLR +AH+ G ++LF+S P L K R
Sbjct: 205 ---------------------LDPALKKHICRCLRSMAHLIGGAVLFYSQKLPKLAKVLR 243
Query: 561 DILNHYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 599
D ++H F S H A DYN+ + + FGTDS + I T
Sbjct: 244 DTISHLGFGSPAHPFRAHVTDYNEALSIWFGTDSWSKISDT 284
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNF 363
+L+P K+ +CLR +AH+ G ++LF+S P L K RD ++H F S H A
Sbjct: 204 DLDPALKKHICRCLRSMAHLIGGAVLFYSQKLPKLAKVLRDTISHLGFGSPAHPFRAHVT 263
Query: 364 DYNKPIFVPFGTDSVASIEGT 384
DYN+ + + FGTDS + I T
Sbjct: 264 DYNEALSIWFGTDSWSKISDT 284
>gi|195473287|ref|XP_002088927.1| GE18841 [Drosophila yakuba]
gi|194175028|gb|EDW88639.1| GE18841 [Drosophila yakuba]
Length = 368
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 24/277 (8%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQS--QERTLLLIGTKSVGKSTLVFRFLEKND-T 61
S++DIA LA + +++ + +ERTLL++G+K VGK+T + +F ++ +
Sbjct: 31 SIQDIAGRLAE------EQQRLRQLEATTAPKERTLLVLGSKCVGKTTAINKFFDREEHA 84
Query: 62 PKPTLALEYIYARKSGKTVMKDICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVL 118
+PTLALEY + R++G + ++WELGS LEV A +++
Sbjct: 85 TRPTLALEYSFGRRTGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VII 139
Query: 119 MLDLSRLNSLWTEAETFLAKFRAIFES-----NESVREKRGSFEHFRTADEHRDKGLIRT 173
MLDLS+ W + E R + +RE R +++ +
Sbjct: 140 MLDLSQPQRFWMDLECAYKGLRGTAQQMMEKVAPELREILEQRTMERVGQRNKEVEKLDP 199
Query: 174 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 233
P P++++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD ++
Sbjct: 200 LPFPVVIVGGKYDVFSGFDPAVRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIS 259
Query: 234 HYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 268
H F S H + D+N+P+ + FG DS + I T
Sbjct: 260 HMGFGSPAHPFRSHVVDFNEPLCIWFGADSWSKIGDT 296
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 718 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 777
P P++++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD ++
Sbjct: 200 LPFPVVIVGGKYDVFSGFDPAVRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIS 259
Query: 778 HYAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHF 835
H F S H + D+N+P+ + FG DS + I T S+++ F
Sbjct: 260 HMGFGSPAHPFRSHVVDFNEPLCIWFGADSWSKIGDT-------GAQSMERIGATFGVEI 312
Query: 836 LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRT 888
Q + K + DP+ D + E +ID +R+QK E+L + R+V ++ K+ +
Sbjct: 313 PQLQLEKQKLQETLDPSKDPGFKESLIDEMRSQKNEELAGLMRDVLLRGKFES 365
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 28/216 (12%)
Query: 389 TADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+ + ++WELGS LEV A +++MLDLS+ W + E
Sbjct: 104 SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-----VIIMLDLSQPQRFWMDLE---C 155
Query: 446 KFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTF 505
++ + + + + EK A E R+ RT + +G + E +
Sbjct: 156 AYKGLRGTAQQMMEK--------VAPELREILEQRT----MERVGQRNKEVEK---LDPL 200
Query: 506 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 565
P P++++GGKYD+F +P ++ +CLR +AH+ G +LLF+S P L K RD ++H
Sbjct: 201 PFPVVIVGGKYDVFSGFDPAVRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTISH 260
Query: 566 YAFSS--HLASAVNFDYNKPIFVPFGTDSVASIEGT 599
F S H + D+N+P+ + FG DS + I T
Sbjct: 261 MGFGSPAHPFRSHVVDFNEPLCIWFGADSWSKIGDT 296
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS--HLASAVNF 363
+P ++ +CLR +AH+ G +LLF+S P L K RD ++H F S H +
Sbjct: 216 GFDPAVRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTISHMGFGSPAHPFRSHVV 275
Query: 364 DYNKPIFVPFGTDSVASIEGT 384
D+N+P+ + FG DS + I T
Sbjct: 276 DFNEPLCIWFGADSWSKIGDT 296
>gi|195053197|ref|XP_001993513.1| GH13023 [Drosophila grimshawi]
gi|193900572|gb|EDV99438.1| GH13023 [Drosophila grimshawi]
Length = 359
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 45/305 (14%)
Query: 3 PKSLKDIAIELAHGKHPSPSSSEVHKIDIQS--QERTLLLIGTKSVGKSTLVFRFLEKND 60
P S+++IA L S + +++ + +ERTL ++G+K VGKS + +F ++++
Sbjct: 15 PSSIQEIAGRL------SEEQQRLRQVEATTAPKERTLFVLGSKCVGKSVAINKFFDRDE 68
Query: 61 -TPKPTLALEYIYARKSGKTVMKDICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTL 116
T +PTLALEY Y R+ G + ++WELGS LEV + L + F
Sbjct: 69 QTTRPTLALEYSYGRRMGSGRSAQVLNVWELGSLDNAEQLLEVP--MRTHGLQQLAAF-- 124
Query: 117 VLMLDLSRLNSLWTEAETFLAKFRAIFE-----SNESVREK--RGSFEHFRTADEHRDKG 169
+M+DLS+ +W + E R + + +RE+ R + E + + +
Sbjct: 125 -IMIDLSQPQRVWADLECAYRGLRDTAQRLLQLATPQLREQLQRRALERVKHVPQDQLNS 183
Query: 170 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 229
L P P++++GGKYD+F +LEP K+ +CLR +AH+ G +LLF+S P L K R
Sbjct: 184 L-ELLPFPVVIVGGKYDIFMDLEPALKKHICRCLRSMAHLIGGALLFYSHKLPKLAKVLR 242
Query: 230 DILNHYAFSS-------HLASAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASLESGGRG 282
D ++H F S H+ DYN+ + + FGTDS I GT E+GG
Sbjct: 243 DTISHLGFGSPTNPFRGHVT-----DYNEALSIWFGTDSWTQI-GTG-------EAGGSC 289
Query: 283 FNRSR 287
F+ R
Sbjct: 290 FSVER 294
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 15/181 (8%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+ P P++++GGKYD+F +LEP K+ +CLR +AH+ G +LLF+S P L K RD
Sbjct: 184 LELLPFPVVIVGGKYDIFMDLEPALKKHICRCLRSMAHLIGGALLFYSHKLPKLAKVLRD 243
Query: 775 ILNHYAFSS-------HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKY 827
++H F S H+ DYN+ + + FGTDS I GT + GS S+++
Sbjct: 244 TISHLGFGSPTNPFRGHVT-----DYNEALSIWFGTDSWTQI-GTGE--AGGSCFSVERI 295
Query: 828 KHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYR 887
+ Q + K + DPA D + E +ID +R QK +L + R+ ++ K+
Sbjct: 296 GATLSVEVPQLLLEKQKQQLPQDPAKDAGFRESLIDEMRAQKDRELATIMRDAALRGKFE 355
Query: 888 T 888
+
Sbjct: 356 S 356
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 37/218 (16%)
Query: 389 TADICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA 445
+A + ++WELGS LEV + L + F +M+DLS+ +W + E
Sbjct: 90 SAQVLNVWELGSLDNAEQLLEVP--MRTHGLQQLAAF---IMIDLSQPQRVWADLE---C 141
Query: 446 KFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTF 505
+R + ++ + + + + ++ + + L R VP + +
Sbjct: 142 AYRGLRDTAQRLLQ----LATPQLREQLQRRALERVKHVPQDQLNS----------LELL 187
Query: 506 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 565
P P++++GGKYD+F +LEP K+ +CLR +AH+ G +LLF+S P L K RD ++H
Sbjct: 188 PFPVVIVGGKYDIFMDLEPALKKHICRCLRSMAHLIGGALLFYSHKLPKLAKVLRDTISH 247
Query: 566 YAFSS-------HLASAVNFDYNKPIFVPFGTDSVASI 596
F S H+ DYN+ + + FGTDS I
Sbjct: 248 LGFGSPTNPFRGHVT-----DYNEALSIWFGTDSWTQI 280
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 12/83 (14%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS-------HLA 358
+LEP K+ +CLR +AH+ G +LLF+S P L K RD ++H F S H+
Sbjct: 203 DLEPALKKHICRCLRSMAHLIGGALLFYSHKLPKLAKVLRDTISHLGFGSPTNPFRGHVT 262
Query: 359 SAVNFDYNKPIFVPFGTDSVASI 381
DYN+ + + FGTDS I
Sbjct: 263 -----DYNEALSIWFGTDSWTQI 280
>gi|349604385|gb|AEP99953.1| Cytoplasmic dynein 2 light intermediate chain 1-like protein,
partial [Equus caballus]
Length = 287
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 121/211 (57%), Gaps = 22/211 (10%)
Query: 69 EYIYARKS-GKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLN 126
EY Y RK+ G + KDI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N
Sbjct: 1 EYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPN 57
Query: 127 SLWTEAETFLAKFRAIF------------ESNESVREKRGSFEHFRTADEHRDKGLIRTF 174
LW E L ++ +++ +R+K S +H D+ +I F
Sbjct: 58 DLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWS----NMQKDHPDREIIDPF 113
Query: 175 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 234
P+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 114 PIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQ 172
Query: 235 YAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
AF + ++ D NKP+F+ G DS++ I
Sbjct: 173 LAFGIDKSKSICVDQNKPLFITAGLDSLSQI 203
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 23/227 (10%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 13 IPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLL-- 67
Query: 447 FRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
+A V K G ++ + + E R K I + D D+ +I FP
Sbjct: 68 -QATKSHVNKVIMKLGK-KNSKASSEMRQK----------IWSNMQKD-HPDREIIDPFP 114
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+ + R ++N
Sbjct: 115 IPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQL 173
Query: 567 AFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
AF + ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 174 AFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPP---VPDNDIGKLH 217
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ +I FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+
Sbjct: 106 DREIIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 164
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS++ I + S ++
Sbjct: 165 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMEL 224
Query: 827 YKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F P +N + K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 225 WKKVYERLF----PPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKR 274
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 128 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 186
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS++ I G+ DI L
Sbjct: 187 QNKPLFITAGLDSLSQI-GSPPVPDNDIGKL 216
>gi|298709164|emb|CBJ31108.1| D2LIC, cytoplasmic dynein 2 light intermediate chain [Ectocarpus
siliculosus]
Length = 468
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 132/238 (55%), Gaps = 13/238 (5%)
Query: 39 LLIGTKSVGKSTLVFRFLEK-NDT-PKPTLALEYIYARKSGKTVM-KDICHLWELGSGTS 95
L +G GKSTL+ +L ND+ PKPT+ALEY++AR++ M KD+ H+WELG G+
Sbjct: 62 LCVGMPGAGKSTLLNTYLNPHNDSIPKPTVALEYMFARRASAANMPKDVAHIWELGGGSH 121
Query: 96 RLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSL------WTEAETFLAKF--RAIFESNE 147
++ + + + + ++++DLSR +S+ WT+ K R + + +
Sbjct: 122 VSDLVRVPITPDRFHDALY--IIVVDLSRPSSVIPHLLQWTDQIKACVKVCVRELGKRDP 179
Query: 148 SVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLA 207
+ E + + +H D +R PVPL+++G KYD+F+N E +KRI Q LR++A
Sbjct: 180 TFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVA 239
Query: 208 HVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
H+NGASLLF SS D L R LN + F + + + +P+ V G DS+ SI
Sbjct: 240 HINGASLLFCSSRDKKLKDILRLTLNTHLFRAGSRKSSETNPERPLAVTAGCDSLDSI 297
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSL------WTEAETFL 444
D+ H+WELG G+ ++ + + + + ++++DLSR +S+ WT+
Sbjct: 109 DVAHIWELGGGSHVSDLVRVPITPDRFHDALY--IIVVDLSRPSSVIPHLLQWTDQIKAC 166
Query: 445 AKF--RAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLI 502
K R + + + + E + + +H D +R PVPL+++G
Sbjct: 167 VKVCVRELGKRDPTFAETLKRKTYAKLGRDHPDLRAVRPCPVPLVIVG------------ 214
Query: 503 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 562
KYD+F+N E +KRI Q LR++AH+NGASLLF SS D L R
Sbjct: 215 -----------NKYDVFKNQESARKRILAQALRFVAHINGASLLFCSSRDKKLKDILRLT 263
Query: 563 LNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
LN + F + + + +P+ V G DS+ SI
Sbjct: 264 LNTHLFRAGSRKSSETNPERPLAVTAGCDSLDSI 297
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+R PVPL+++G KYD+F+N E +KRI Q LR++AH+NGASLLF SS D L R
Sbjct: 203 VRPCPVPLVIVGNKYDVFKNQESARKRILAQALRFVAHINGASLLFCSSRDKKLKDILRL 262
Query: 775 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 809
LN + F + + + +P+ V G DS+ SI
Sbjct: 263 TLNTHLFRAGSRKSSETNPERPLAVTAGCDSLDSI 297
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+N E +KRI Q LR++AH+NGASLLF SS D L R LN + F + + +
Sbjct: 221 KNQESARKRILAQALRFVAHINGASLLFCSSRDKKLKDILRLTLNTHLFRAGSRKSSETN 280
Query: 365 YNKPIFVPFGTDSVASI 381
+P+ V G DS+ SI
Sbjct: 281 PERPLAVTAGCDSLDSI 297
>gi|308480340|ref|XP_003102377.1| CRE-XBX-1 protein [Caenorhabditis remanei]
gi|308262043|gb|EFP05996.1| CRE-XBX-1 protein [Caenorhabditis remanei]
Length = 416
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 133/237 (56%), Gaps = 10/237 (4%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGT 94
E +++ G + GKS+ + FLE+ + K ++ LE+ YAR++ V KD+ +LWELG G+
Sbjct: 91 ESHIIIAGNRKCGKSSFMLNFLERKEDLKESVGLEFTYARRTRGNV-KDVANLWELGGGS 149
Query: 95 SRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVR---E 151
S E+ S+ ++ +L+++LD++ L+ +W E + R + E+ E +
Sbjct: 150 SVTELLSV--PITMKNVETCSLIVLLDMTNLDEVWITIEKTVDTVRRLVENLEKQDNNLQ 207
Query: 152 KRGSFEHFRTADEHRDKGLIRTF---PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAH 208
KR + E R E D G ++ P+P+ ++ KYD F+N E K+R Q LR+LA+
Sbjct: 208 KRLA-EKMRLRLEKYDSGSLKMCTPCPIPMTIVATKYDEFQNFESEKRRHLCQFLRFLAY 266
Query: 209 VNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
GA+L+ +SS K +++++H+AF + D+NKP+F+ G D++ SI
Sbjct: 267 SYGANLMMYSSRMEQFPKLVKNMISHFAFGTVCPQGYITDHNKPMFIKCGFDNLESI 323
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
D+ +LWELG G+S E+ S+ ++ +L+++LD++ L+ +W E + R +
Sbjct: 138 DVANLWELGGGSSVTELLSV--PITMKNVETCSLIVLLDMTNLDEVWITIEKTVDTVRRL 195
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
E+ E +D L + + L KYD K + P+P+
Sbjct: 196 VENLEK-----------------QDNNLQKRLAEKMRLRLEKYDSGSLK-MCTPCPIPMT 237
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
++ KYD F+N E K+R Q LR+LA+ GA+L+ +SS K +++++H+AF +
Sbjct: 238 IVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNMISHFAFGT 297
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASI 596
D+NKP+F+ G D++ SI
Sbjct: 298 VCPQGYITDHNKPMFIKCGFDNLESI 323
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 12/220 (5%)
Query: 659 NQGWIIKILKWVVSSRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTF 718
++ WI I K V + R E+ D + K L + L KYD K +
Sbjct: 179 DEVWIT-IEKTVDTVRRLVENLEKQDNNLQKRLAEKMRLRL----EKYDSGSLK-MCTPC 232
Query: 719 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 778
P+P+ ++ KYD F+N E K+R Q LR+LA+ GA+L+ +SS K +++++H
Sbjct: 233 PIPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNMISH 292
Query: 779 YAFSSHLASAVNFDYNKPIFVPFGTDSVASI---EGTTQYVTAGSTSSLDKYKHIFTTHF 835
+AF + D+NKP+F+ G D++ SI G+ ++ G++S + ++ F + +
Sbjct: 293 FAFGTVCPQGYITDHNKPMFIKCGFDNLESIGIPPGSENFM--GASSPFNLWRESFISIW 350
Query: 836 LQDDPSQN-KSKSAPDPALDQNYSEPVIDSLRNQKLEQLD 874
Q + + + DP +D + EP ID+L K ++L+
Sbjct: 351 PQKSGNLDVEDTKKQDPMIDPVFKEPNIDNLVEIKRKELE 390
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+N E K+R Q LR+LA+ GA+L+ +SS K +++++H+AF + D
Sbjct: 247 QNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNMISHFAFGTVCPQGYITD 306
Query: 365 YNKPIFVPFGTDSVASI 381
+NKP+F+ G D++ SI
Sbjct: 307 HNKPMFIKCGFDNLESI 323
>gi|86563861|ref|NP_506683.2| Protein XBX-1 [Caenorhabditis elegans]
gi|77799271|emb|CAB01645.2| Protein XBX-1 [Caenorhabditis elegans]
Length = 370
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 127/236 (53%), Gaps = 8/236 (3%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGT 94
E ++ G + GKS+ + FLE+ + K ++ LEY YAR++ V KDI +LWELG G
Sbjct: 45 ESHIIFAGNRKSGKSSFMLNFLERKEDLKDSVGLEYTYARRTRGNV-KDIANLWELGGGA 103
Query: 95 SRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFES--NESVREK 152
+ E+ S+ ++ +L+L+LD++ L+ +W E + R + E+ + + +
Sbjct: 104 TVTELLSV--PITMKNVEICSLILLLDMTNLDEMWITIEKTVDSVRRLVENLERQDINLQ 161
Query: 153 RGSFEHFRTADEHRDKGLIRTF---PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHV 209
E R E D G ++ P+P+ ++ KYD F+N E K+R Q LR+LA+
Sbjct: 162 TRLAEKMRLRLEKYDDGSLKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYS 221
Query: 210 NGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
GA+L+ SS K +++ +H+AF + D+NKP+FV G DS+ SI
Sbjct: 222 YGANLMMFSSRMEQFPKLVKNMTSHFAFGTVCPQGYMTDHNKPMFVKCGFDSLESI 277
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI +LWELG G + E+ S+ ++ +L+L+LD++ L+ +W E + R +
Sbjct: 92 DIANLWELGGGATVTELLSV--PITMKNVEICSLILLLDMTNLDEMWITIEKTVDSVRRL 149
Query: 451 FES--NESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
E+ + + + E R E D G ++ + P+P
Sbjct: 150 VENLERQDINLQTRLAEKMRLRLEKYDDGSLK--------------------MCNPCPIP 189
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
+ ++ KYD F+N E K+R Q LR+LA+ GA+L+ SS K +++ +H+AF
Sbjct: 190 VTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPKLVKNMTSHFAF 249
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSVASI 596
+ D+NKP+FV G DS+ SI
Sbjct: 250 GTVCPQGYMTDHNKPMFVKCGFDSLESI 277
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 659 NQGWIIKILKWVVSSRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTF 718
++ WI I K V S R E+ E +D L + L KYD K +
Sbjct: 133 DEMWIT-IEKTVDSVRRLVENL----ERQDINLQTRLAEKMRLRLEKYDDGSLK-MCNPC 186
Query: 719 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 778
P+P+ ++ KYD F+N E K+R Q LR+LA+ GA+L+ SS K +++ +H
Sbjct: 187 PIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPKLVKNMTSH 246
Query: 779 YAFSSHLASAVNFDYNKPIFVPFGTDSVASI---EGTTQYVTAGSTSSLDKYKHIFTTHF 835
+AF + D+NKP+FV G DS+ SI + ++ G++S + ++ F + +
Sbjct: 247 FAFGTVCPQGYMTDHNKPMFVKCGFDSLESIGIPPASDNFM--GASSPFNLWRESFISLW 304
Query: 836 LQDDPSQN-KSKSAPDPALDQNYSEPVIDSLRNQKLEQL 873
Q + + + DP +D + EP ID+L K ++L
Sbjct: 305 PQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKEL 343
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+N E K+R Q LR+LA+ GA+L+ SS K +++ +H+AF + D
Sbjct: 201 QNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPKLVKNMTSHFAFGTVCPQGYMTD 260
Query: 365 YNKPIFVPFGTDSVASI 381
+NKP+FV G DS+ SI
Sbjct: 261 HNKPMFVKCGFDSLESI 277
>gi|357608119|gb|EHJ65832.1| hypothetical protein KGM_08714 [Danaus plexippus]
Length = 295
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 127/233 (54%), Gaps = 33/233 (14%)
Query: 36 RTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKT--VMKDICHLWELGSG 93
RT++L+G+KS GKS L++ FLEK++TP+ TL LEY + RKS + + K ICH+WE G
Sbjct: 24 RTIVLVGSKSAGKSHLLYSFLEKSETPRETLVLEYSFGRKSSQKPGMDKTICHVWEYGGK 83
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKR 153
L + S+ + F +M+DLS++ ++W ET +
Sbjct: 84 LEMLHSVLI----SVPIKGKFYFCIMVDLSKIKTIWNVLETCYQAMK------------- 126
Query: 154 GSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGAS 213
E++ +D H + L++IGGKYD+F+N + K++ +R A ++ +
Sbjct: 127 ---ENYSDSDYHPE----------LVIIGGKYDIFKNYDSEIKKVISTTMRSFALISNGN 173
Query: 214 LLFHSSLDPGLVKRTRDILNHYAFSSHLA-SAVNFDYNKPIFVPFGTDSVASI 265
LLF+SS +P LV+R +++ + F + ++ N +Y+KP+ + G D+ +I
Sbjct: 174 LLFYSSKEPQLVRRAKEMFFNMGFGNGVSLKEKNTNYSKPLSISKGQDTWENI 226
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 86/157 (54%), Gaps = 14/157 (8%)
Query: 722 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 781
L++IGGKYD+F+N + K++ +R A ++ +LLF+SS +P LV+R +++ + F
Sbjct: 138 LVIIGGKYDIFKNYDSEIKKVISTTMRSFALISNGNLLFYSSKEPQLVRRAKEMFFNMGF 197
Query: 782 SSHLA-SAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQDDP 840
+ ++ N +Y+KP+ + G D+ +I G Q S+LD+ K H + P
Sbjct: 198 GNGVSLKEKNTNYSKPLSISKGQDTWENI-GIPQ-------STLDQIKQ---RHISRITP 246
Query: 841 SQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMR 877
+ ++ L +++ EP++DSL K ++L M
Sbjct: 247 EMDINQEV--KPLQRSHPEPILDSLATLKYDELRNME 281
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 54/206 (26%)
Query: 392 ICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIF 451
ICH+WE G L + S+ + F +M+DLS++ ++W ET +
Sbjct: 74 ICHVWEYGGKLEMLHSVLI----SVPIKGKFYFCIMVDLSKIKTIWNVLETCYQAMK--- 126
Query: 452 ESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLIL 511
E++ +D H + L++IGG
Sbjct: 127 -------------ENYSDSDYHPE----------LVIIGG-------------------- 143
Query: 512 IGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSH 571
KYD+F+N + K++ +R A ++ +LLF+SS +P LV+R +++ + F +
Sbjct: 144 ---KYDIFKNYDSEIKKVISTTMRSFALISNGNLLFYSSKEPQLVRRAKEMFFNMGFGNG 200
Query: 572 LA-SAVNFDYNKPIFVPFGTDSVASI 596
++ N +Y+KP+ + G D+ +I
Sbjct: 201 VSLKEKNTNYSKPLSISKGQDTWENI 226
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLA-SAVNF 363
+N + K++ +R A ++ +LLF+SS +P LV+R +++ + F + ++ N
Sbjct: 149 KNYDSEIKKVISTTMRSFALISNGNLLFYSSKEPQLVRRAKEMFFNMGFGNGVSLKEKNT 208
Query: 364 DYNKPIFVPFGTDSVASI 381
+Y+KP+ + G D+ +I
Sbjct: 209 NYSKPLSISKGQDTWENI 226
>gi|241999380|ref|XP_002434333.1| cytoplasmic dynein 2 light intermediate chain, putative [Ixodes
scapularis]
gi|215497663|gb|EEC07157.1| cytoplasmic dynein 2 light intermediate chain, putative [Ixodes
scapularis]
Length = 240
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 97/171 (56%), Gaps = 6/171 (3%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
DKGL+ FPVPL+++G KYD+FEN EP K++ + LR+LAH GASLLF S + L
Sbjct: 58 DKGLLDVFPVPLVIVGTKYDIFENFEPEKRKALCRFLRHLAHGQGASLLFTSLKNEALAS 117
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKY--- 827
R + L+ AF S DYNKP+ + FG DS +I+G+ Q T ST + Y
Sbjct: 118 RAKAALSQLAFGSGTGKGSTVDYNKPLNIMFGEDSFEAIDGSHQSSTKTSTQMSNSYNLV 177
Query: 828 KHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
K F +F Q + KS DPA D + E ID ++ QK ++L+ R+
Sbjct: 178 KQQFADYFPQ---VEQKSVVPEDPARDPYFKEKDIDIMKAQKEKELEDYRK 225
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 128 LWTEAETFLAKFR----AIFES--------NESVREKRGSFEHFRTADEHRDKGLIRTFP 175
L T AE+ L R A+ E E+V+E + R + H DKGL+ FP
Sbjct: 11 LCTSAESLLKVVRSRVAAVIEDAQRLDRAYGEAVQEAAAA----RIPEGHPDKGLLDVFP 66
Query: 176 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 235
VPL+++G KYD+FEN EP K++ + LR+LAH GASLLF S + L R + L+
Sbjct: 67 VPLVIVGTKYDIFENFEPEKRKALCRFLRHLAHGQGASLLFTSLKNEALASRAKAALSQL 126
Query: 236 AFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT 268
AF S DYNKP+ + FG DS +I+G+
Sbjct: 127 AFGSGTGKGSTVDYNKPLNIMFGEDSFEAIDGS 159
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%)
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
DKGL+ FPVPL+++G KYD+FEN EP K++ + LR+LAH GASLLF S + L
Sbjct: 58 DKGLLDVFPVPLVIVGTKYDIFENFEPEKRKALCRFLRHLAHGQGASLLFTSLKNEALAS 117
Query: 558 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVT 604
R + L+ AF S DYNKP+ + FG DS +I+G+ Q T
Sbjct: 118 RAKAALSQLAFGSGTGKGSTVDYNKPLNIMFGEDSFEAIDGSHQSST 164
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDY 365
N EP K++ + LR+LAH GASLLF S + L R + L+ AF S DY
Sbjct: 81 NFEPEKRKALCRFLRHLAHGQGASLLFTSLKNEALASRAKAALSQLAFGSGTGKGSTVDY 140
Query: 366 NKPIFVPFGTDSVASIEGTTQYVT 389
NKP+ + FG DS +I+G+ Q T
Sbjct: 141 NKPLNIMFGEDSFEAIDGSHQSST 164
>gi|341884313|gb|EGT40248.1| hypothetical protein CAEBREN_31685 [Caenorhabditis brenneri]
Length = 370
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 134/248 (54%), Gaps = 17/248 (6%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGT 94
E +++ G + GKS+ + FLE+ + K ++ LE+ YAR++ V KD+ +LWELG G+
Sbjct: 45 ESHIIIAGNRKSGKSSFMLNFLERKEDLKDSVGLEFTYARRTRGNV-KDVANLWELGGGS 103
Query: 95 SRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRG 154
S ++ S+ + +L+++LD++ L+ +W E + R + E+ E++
Sbjct: 104 SVTQLLSV--PITNKNVETCSLIVLLDMTNLDEMWIAIEKTVDTIRRLVEN----IERQD 157
Query: 155 SFEHFRTADEHR------DKGLIRTF---PVPLILIGGKYDLFENLEPNKKRIAVQCLRY 205
R AD+ R D G +R P+P+ ++ KYD F+N E K+R Q LR+
Sbjct: 158 LNLQTRLADKMRIRLQKYDSGSLRMCEPCPIPITIVASKYDEFQNFESEKRRHLCQFLRF 217
Query: 206 LAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
L + GA+L+ +SS K +++++H+AF + D+NKP+F+ G D++ SI
Sbjct: 218 LTYYYGANLMMYSSKMEQFPKLVKNMISHFAFGTVCPQGYITDHNKPMFIRCGFDNLESI 277
Query: 266 EGTTHGKD 273
G G D
Sbjct: 278 -GMPPGSD 284
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 26/209 (12%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
D+ +LWELG G+S ++ S+ + +L+++LD++ L+ +W E + R +
Sbjct: 92 DVANLWELGGGSSVTQLLSV--PITNKNVETCSLIVLLDMTNLDEMWIAIEKTVDTIRRL 149
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTF---PV 507
E+ E++ R AD+ R IR KYD G +R P+
Sbjct: 150 VEN----IERQDLNLQTRLADKMR----IRL---------QKYD----SGSLRMCEPCPI 188
Query: 508 PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA 567
P+ ++ KYD F+N E K+R Q LR+L + GA+L+ +SS K +++++H+A
Sbjct: 189 PITIVASKYDEFQNFESEKRRHLCQFLRFLTYYYGANLMMYSSKMEQFPKLVKNMISHFA 248
Query: 568 FSSHLASAVNFDYNKPIFVPFGTDSVASI 596
F + D+NKP+F+ G D++ SI
Sbjct: 249 FGTVCPQGYITDHNKPMFIRCGFDNLESI 277
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 711 DKGLIRTF---PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPG 767
D G +R P+P+ ++ KYD F+N E K+R Q LR+L + GA+L+ +SS
Sbjct: 176 DSGSLRMCEPCPIPITIVASKYDEFQNFESEKRRHLCQFLRFLTYYYGANLMMYSSKMEQ 235
Query: 768 LVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI---EGTTQYVTAGSTSSL 824
K +++++H+AF + D+NKP+F+ G D++ SI G+ ++ G++S
Sbjct: 236 FPKLVKNMISHFAFGTVCPQGYITDHNKPMFIRCGFDNLESIGMPPGSDNFI--GASSPF 293
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSA-PDPALDQNYSEPVIDSLRNQKLEQLD 874
+ ++ F + + Q + + S PDP D + EP ID+L K ++L+
Sbjct: 294 NLWRESFISIWPQQTGNIDAEDSKRPDPMTDSTFKEPSIDNLVEIKRKELE 344
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+N E K+R Q LR+L + GA+L+ +SS K +++++H+AF + D
Sbjct: 201 QNFESEKRRHLCQFLRFLTYYYGANLMMYSSKMEQFPKLVKNMISHFAFGTVCPQGYITD 260
Query: 365 YNKPIFVPFGTDSVASI 381
+NKP+F+ G D++ SI
Sbjct: 261 HNKPMFIRCGFDNLESI 277
>gi|307168567|gb|EFN61625.1| Cytoplasmic dynein 2 light intermediate chain 1 [Camponotus
floridanus]
Length = 279
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 115/200 (57%), Gaps = 2/200 (1%)
Query: 68 LEYIYARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNS 127
++Y + RK+ K+++K+I H+WE+G TS L ++ S + L++MLDLSR +
Sbjct: 1 MDYSFGRKTVKSLVKNIVHVWEVGHLTSSLVSVAMTGSTLTHSPHHTVLLMMLDLSRPDE 60
Query: 128 LWTEAETFLAKFRAIFE-SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYD 186
LWT E L+ R+ + S +S K+ + + + ++G + FP+ + ++GG+YD
Sbjct: 61 LWTSFEETLSVLRSGLKMSYDSETIKKLQEKRIASIKKDMERG-VDPFPMQMCILGGRYD 119
Query: 187 LFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVN 246
F+ + NKK + LR +AH G+SL ++SS D LV+R +D+L+HY F S
Sbjct: 120 EFKEFDSNKKEFIGKILRAIAHSLGSSLYYYSSKDKFLVRRLKDLLSHYGFGSSFTEEKC 179
Query: 247 FDYNKPIFVPFGTDSVASIE 266
DY KP+ +P G DS I+
Sbjct: 180 TDYEKPLMMPAGADSFGRID 199
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 4/159 (2%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+ FP+ + ++GG+YD F+ + NKK + LR +AH G+SL ++SS D LV+R +D
Sbjct: 104 VDPFPMQMCILGGRYDEFKEFDSNKKEFIGKILRAIAHSLGSSLYYYSSKDKFLVRRLKD 163
Query: 775 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTH 834
+L+HY F S DY KP+ +P G DS I+ Q+ ++ LD K I+ +
Sbjct: 164 LLSHYGFGSSFTEEKCTDYEKPLMMPAGADSFGRID--LQFPQTRPSAILDIIKQIYISR 221
Query: 835 FLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQL 873
Q S+N DP+ D N++EP+ID LR Q+ E++
Sbjct: 222 IPQ--VSRNDESILEDPSNDPNFNEPIIDRLRMQREEEI 258
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 384 TTQYVTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETF 443
T + + +I H+WE+G TS L ++ S + L++MLDLSR + LWT E
Sbjct: 9 TVKSLVKNIVHVWEVGHLTSSLVSVAMTGSTLTHSPHHTVLLMMLDLSRPDELWTSFEET 68
Query: 444 LAKFRAIFE-SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLI 502
L+ R+ + S +S K+ + + + ++G + FP+ + ++GG+YD F++
Sbjct: 69 LSVLRSGLKMSYDSETIKKLQEKRIASIKKDMERG-VDPFPMQMCILGGRYDEFKE---- 123
Query: 503 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 562
+ NKK + LR +AH G+SL ++SS D LV+R +D+
Sbjct: 124 -------------------FDSNKKEFIGKILRAIAHSLGSSLYYYSSKDKFLVRRLKDL 164
Query: 563 LNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 597
L+HY F S DY KP+ +P G DS I+
Sbjct: 165 LSHYGFGSSFTEEKCTDYEKPLMMPAGADSFGRID 199
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+ + NKK + LR +AH G+SL ++SS D LV+R +D+L+HY F S D
Sbjct: 122 KEFDSNKKEFIGKILRAIAHSLGSSLYYYSSKDKFLVRRLKDLLSHYGFGSSFTEEKCTD 181
Query: 365 YNKPIFVPFGTDSVASIE 382
Y KP+ +P G DS I+
Sbjct: 182 YEKPLMMPAGADSFGRID 199
>gi|432904466|ref|XP_004077345.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Oryzias latipes]
Length = 328
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 54/280 (19%)
Query: 3 PKSLKDIAIELAHGKHPSPSSSEVHKIDIQSQ---ERTLLLIGTKSVGKSTLVFRFLEKN 59
PK + D ELA ++EV + + + ERT+ L+G+K+ GK++++ R LE++
Sbjct: 2 PKIISDSLWELA--------AAEVQHQESEEETVSERTVFLMGSKAGGKTSILLRCLERD 53
Query: 60 DTPKPTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLV 117
+ PKPTLALEY + R++ G KDI HLWELG GTS ++ + +S S+ S +++
Sbjct: 54 EAPKPTLALEYTFGRRARGHNTPKDIAHLWELGGGTSLSDLVQIPITSVSV---SCLSVI 110
Query: 118 LMLDLSRLNSLWTEAETFLAKFRA----IF-ESNESVREKRGS----FEHFRT---ADEH 165
L+LDLS+ N LW E L + +F ++ ++ + K G+ F H ++
Sbjct: 111 LVLDLSKPNDLWVTMEKLLQAVQTQVDKVFSQAAQAQKSKPGTKNQQFVHPAARVLPKDY 170
Query: 166 RDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 225
D+ LI FPVPL++IG KYDLF+ F S L+
Sbjct: 171 PDRELISPFPVPLLIIGSKYDLFQ--------------------------FTSIKSESLM 204
Query: 226 KRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
+ + +H AF ++ D NK + + G+DS + I
Sbjct: 205 SKIKSFFSHLAFGLDRGKTLSSDLNKALIISAGSDSFSQI 244
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI HLWELG GTS ++ + +S S+ S +++L+LDLS+ N LW E L +A
Sbjct: 78 DIAHLWELGGGTSLSDLVQIPITSVSV---SCLSVILVLDLSKPNDLWVTMEKLL---QA 131
Query: 450 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPL 509
+ + V F A + + + F P + K + D+ LI FPVPL
Sbjct: 132 VQTQVDKV------FSQAAQAQKSKPGTKNQQFVHPAARVLPKD--YPDRELISPFPVPL 183
Query: 510 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 569
++IG KYDLF+ F S L+ + + +H AF
Sbjct: 184 LIIGSKYDLFQ--------------------------FTSIKSESLMSKIKSFFSHLAFG 217
Query: 570 SHLASAVNFDYNKPIFVPFGTDSVASI 596
++ D NK + + G+DS + I
Sbjct: 218 LDRGKTLSSDLNKALIISAGSDSFSQI 244
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 36/176 (20%)
Query: 709 FEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGL 768
+ D+ LI FPVPL++IG KYDLF+ F S L
Sbjct: 170 YPDRELISPFPVPLLIIGSKYDLFQ--------------------------FTSIKSESL 203
Query: 769 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSL---- 824
+ + + +H AF ++ D NK + + G+DS + I + VT +SL
Sbjct: 204 MSKIKSFFSHLAFGLDRGKTLSSDLNKALIISAGSDSFSQIGPPS--VTDVDITSLHAKN 261
Query: 825 --DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
D ++ ++ F ++ S+ K DP+ D YSEP ID++R QK ++L+Q ++
Sbjct: 262 PKDLWRKVYEHVFPHENASEQKELK--DPSKDPQYSEPQIDAMRAQKDQELEQYKK 315
>gi|328703763|ref|XP_001952477.2| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Acyrthosiphon pisum]
Length = 180
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 7/160 (4%)
Query: 30 DIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWE 89
D+ ERTLL+IG+K+ GK++L+ F +KN+ PKPTLALEY +AR+SGK++ KDICH+WE
Sbjct: 25 DMVPVERTLLVIGSKNSGKTSLIHSFFDKNEKPKPTLALEYSFARRSGKSLTKDICHVWE 84
Query: 90 LGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESV 149
LG G ++ S+ T ++VL+LDLS+ + LW E L + + E+ +
Sbjct: 85 LGGGLIFKDLLSVI--VQKTKGRRLSVVLVLDLSKPDILWNTMEMLLEEIKIHLENVPEI 142
Query: 150 REKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 189
+ + + DK + P+PL+++G KYD+++
Sbjct: 143 EQ----YNQINVKNVE-DKKFLSPLPIPLMIVGSKYDVYQ 177
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 388 VTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKF 447
+T DICH+WELG G ++ S+ T ++VL+LDLS+ + LW E L +
Sbjct: 75 LTKDICHVWELGGGLIFKDLLSVI--VQKTKGRRLSVVLVLDLSKPDILWNTMEMLLEEI 132
Query: 448 RAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
+ E+ + + + + DK + P+PL+++G KYD+++
Sbjct: 133 KIHLENVPEIEQ----YNQINVKNVE-DKKFLSPLPIPLMIVGSKYDVYQ 177
>gi|428171992|gb|EKX40905.1| hypothetical protein GUITHDRAFT_175552 [Guillardia theta CCMP2712]
Length = 449
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 26/258 (10%)
Query: 32 QSQERTLLLIGTKSVGKSTLVFRFL--EKNDTPKPTLALEYIYAR--KSGKTVMKDICHL 87
Q E +L+GTKS GKSTL+ R +K+D +PT+AL+Y +AR GKT KD+ H
Sbjct: 82 QQSEGHAILVGTKSSGKSTLIQRCKSSDKDDELQPTIALDYSFARTVDKGKTGNKDVAHF 141
Query: 88 WELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNE 147
WE+G GTS ++ L + V++ DLS+ + + + +L K ++ E
Sbjct: 142 WEVGGGTSLPDL--LDVPLNENNLKNVAFVIVADLSKPSEVIAVVQFWLRKLERRIQTLE 199
Query: 148 SVREKRG------------SFEHFRTADE-HRD-----KGLIRTFPVPLILIGGKYDLFE 189
+ +K S F E H+D L + PV ++++ KYD F
Sbjct: 200 QICKKDPKQAKLIEMLKDRSIRRFGDGGEKHKDMQGPLSNLFKIHPVNIVIVASKYDEFA 259
Query: 190 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVN--F 247
+ +P K++ + LR+LAH NG+SLL+ S + L+ R IL+ Y
Sbjct: 260 HKDPELKKVMSRTLRFLAHTNGSSLLYTSQNEKQLISNFRQILSQYLLKGQQVRKEQRVV 319
Query: 248 DYNKPIFVPFGTDSVASI 265
D+ KP+ VP G+D + I
Sbjct: 320 DHLKPLLVPAGSDLLEDI 337
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
D+ H WE+G GTS ++ L + V++ DLS+ + + + +L K
Sbjct: 137 DVAHFWEVGGGTSLPDL--LDVPLNENNLKNVAFVIVADLSKPSEVIAVVQFWLRKLERR 194
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFED-----KGLIRTF 505
++ E + +K + + + +D+ IR F G + +D L +
Sbjct: 195 IQTLEQICKK--DPKQAKLIEMLKDRS-IRRF-------GDGGEKHKDMQGPLSNLFKIH 244
Query: 506 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 565
PV ++++ KYD F + +P K++ + LR+LAH NG+SLL+ S + L+ R IL+
Sbjct: 245 PVNIVIVASKYDEFAHKDPELKKVMSRTLRFLAHTNGSSLLYTSQNEKQLISNFRQILSQ 304
Query: 566 YAFSSHLASAVN--FDYNKPIFVPFGTDSVASI 596
Y D+ KP+ VP G+D + I
Sbjct: 305 YLLKGQQVRKEQRVVDHLKPLLVPAGSDLLEDI 337
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 714 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 773
L + PV ++++ KYD F + +P K++ + LR+LAH NG+SLL+ S + L+ R
Sbjct: 240 LFKIHPVNIVIVASKYDEFAHKDPELKKVMSRTLRFLAHTNGSSLLYTSQNEKQLISNFR 299
Query: 774 DILNHYAFSSHLASAVN--FDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIF 831
IL+ Y D+ KP+ VP G+D + I V++ S L H++
Sbjct: 300 QILSQYLLKGQQVRKEQRVVDHLKPLLVPAGSDLLEDIGAPPVDVSSLDRSKLSDPLHLW 359
Query: 832 TTHF 835
+F
Sbjct: 360 LHYF 363
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 308 EPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVN--FDY 365
+P K++ + LR+LAH NG+SLL+ S + L+ R IL+ Y D+
Sbjct: 262 DPELKKVMSRTLRFLAHTNGSSLLYTSQNEKQLISNFRQILSQYLLKGQQVRKEQRVVDH 321
Query: 366 NKPIFVPFGTDSVASIEGTTQYVT-------ADICHLW 396
KP+ VP G+D + I V+ +D HLW
Sbjct: 322 LKPLLVPAGSDLLEDIGAPPVDVSSLDRSKLSDPLHLW 359
>gi|321473959|gb|EFX84925.1| hypothetical protein DAPPUDRAFT_314520 [Daphnia pulex]
Length = 278
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 120/242 (49%), Gaps = 36/242 (14%)
Query: 32 QSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELG 91
Q + +TL L+GT GK+TL+ FL+K+D PK +L +EY Y R++ K ++KDIC++WE
Sbjct: 25 QPELQTLFLVGTPKSGKTTLIHAFLDKDDEPKASLPVEYTYIRRTNKHMVKDICYIWE-- 82
Query: 92 SGTSRLEVASLFSSFSLTAQSGF---TLVLMLDLSRLNSLWTEAETFLAKFRAIFESNES 148
+++ ++ LT G +L+L++DL + LW ET
Sbjct: 83 -----VDITNITFVSQLTKSEGLEKISLLLVIDLLHVQDLWNAFET-------------- 123
Query: 149 VREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAH 208
E F+ E K + V +IG KYDLFE+L KK I + ++ A
Sbjct: 124 -------VESFKKNMEAETKTI-----VNFGIIGMKYDLFEDLTTEKKLILCRITKHYAT 171
Query: 209 VNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT 268
+ L F + D +K +D+ +H AF++ + + FD + PI +P G ++ + I
Sbjct: 172 ILDGHLSFCAKKDRTTLKVAKDLFSHLAFTTKFSHQLRFDLSSPIIIPRGGENKSEINYL 231
Query: 269 TH 270
H
Sbjct: 232 HH 233
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 17/149 (11%)
Query: 724 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 783
+IG KYDLFE+L KK I + ++ A + L F + D +K +D+ +H AF++
Sbjct: 143 IIGMKYDLFEDLTTEKKLILCRITKHYATILDGHLSFCAKKDRTTLKVAKDLFSHLAFTT 202
Query: 784 HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQDDPSQN 843
+ + FD + PI +P G + S ++ H F T F P
Sbjct: 203 KFSHQLRFDLSSPIIIPRG---------------GENKSEINYLHHTFETQFAH-KPIVT 246
Query: 844 KSKSAPDPALDQNYSEPVIDSLRNQKLEQ 872
K + DPA D NY+ VID R + LE+
Sbjct: 247 K-RDDDDPAEDLNYTNDVIDKRREKCLEE 274
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 381 IEGTTQYVTADICHLWELGSGTSRLEVASLFSSFSLTAQSGF---TLVLMLDLSRLNSLW 437
I T +++ DIC++WE +++ ++ LT G +L+L++DL + LW
Sbjct: 66 IRRTNKHMVKDICYIWE-------VDITNITFVSQLTKSEGLEKISLLLVIDLLHVQDLW 118
Query: 438 TEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
ET E F+ E K + V +IG KYDLFE
Sbjct: 119 NAFET---------------------VESFKKNMEAETKTI-----VNFGIIGMKYDLFE 152
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
D L KK I + ++ A + L F + D +K
Sbjct: 153 D-----------------------LTTEKKLILCRITKHYATILDGHLSFCAKKDRTTLK 189
Query: 558 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKHLTTK 617
+D+ +H AF++ + + FD + PI +P G ++ + I + T +T+ K + TK
Sbjct: 190 VAKDLFSHLAFTTKFSHQLRFDLSSPIIIPRGGENKSEINYL--HHTFETQFAHKPIVTK 247
Query: 618 YSSNSALGLMN 628
+ +N
Sbjct: 248 RDDDDPAEDLN 258
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+L KK I + ++ A + L F + D +K +D+ +H AF++ + + FD
Sbjct: 152 EDLTTEKKLILCRITKHYATILDGHLSFCAKKDRTTLKVAKDLFSHLAFTTKFSHQLRFD 211
Query: 365 YNKPIFVPFGTDSVASI 381
+ PI +P G ++ + I
Sbjct: 212 LSSPIIIPRGGENKSEI 228
>gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena
thermophila]
Length = 474
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 129/243 (53%), Gaps = 15/243 (6%)
Query: 35 ERTLLLIGTKSVGKSTLV--FRFLEK-NDTPKPTLALEYIYARKSGKTVMKDICHLWELG 91
E+TL++IG K GK+T V + +++ +D PT+ L+Y Y R++ K++ H +ELG
Sbjct: 43 EKTLVVIGDKGSGKTTFVNILKNMQQVDDRYIPTVGLDYQYVRRTNAN-RKELIHSYELG 101
Query: 92 SGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE------- 144
G + ++ ++ S + F +L+LDLS+ + + A + + R +
Sbjct: 102 GGKEQSKMITIPIS-KQNFRDAF-YILVLDLSKPHQIIESATFWFEEIRRQIDQFNLTAF 159
Query: 145 SNESVREKRGSFEHFRTA--DEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQC 202
+ ++R +FE + A + H DK ++ P+ I+IG KYDLFE + ++ +
Sbjct: 160 TTPEENDQRSNFEFAQQARFESHPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRT 219
Query: 203 LRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSV 262
LRYLAHVNGASL F SS + L + R I+N+ F LA ++ +PI + D +
Sbjct: 220 LRYLAHVNGASLYFASSKNNDLFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDEL 279
Query: 263 ASI 265
A +
Sbjct: 280 AKM 282
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 704 GKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSS 763
+++ DK ++ P+ I+IG KYDLFE + ++ + LRYLAHVNGASL F SS
Sbjct: 177 ARFESHPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASS 236
Query: 764 LDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSS 823
+ L + R I+N+ F LA ++ +PI + D +A + G Q +G+ +
Sbjct: 237 KNNDLFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDELAKM-GLPQ--ISGNMTY 293
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRRE 879
L+ +K + F ++ +QN + P L + + E IDS+R +K +++ + +E
Sbjct: 294 LEAFKKVIQETFPENKGAQNDASQDP-LRLMEKFPEARIDSIRAEKDKEMKAISKE 348
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
++ H +ELG G + ++ ++ S + F +L+LDLS+ + + E+ TF
Sbjct: 93 ELIHSYELGGGKEQSKMITIPIS-KQNFRDAF-YILVLDLSKPHQI-IESATFWF----- 144
Query: 451 FESNESVREKRGSFE--HFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
E +R + F F T +E+ + +++ DK ++ P+
Sbjct: 145 ----EEIRRQIDQFNLTAFTTPEENDQRSNFE------FAQQARFESHPDKNRVKILPIQ 194
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
I+IG KYDLFE + ++ + LRYLAHVNGASL F SS + L + R I+N+ F
Sbjct: 195 TIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSKNNDLFQNVRSIMNNALF 254
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSVA-----SIEGTTQYVTA 605
LA ++ +PI + D +A I G Y+ A
Sbjct: 255 GKTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNMTYLEA 296
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 316 VQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGT 375
+ LRYLAHVNGASL F SS + L + R I+N+ F LA ++ +PI +
Sbjct: 217 TRTLRYLAHVNGASLYFASSKNNDLFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSK 276
Query: 376 DSVA-----SIEGTTQYVTA 390
D +A I G Y+ A
Sbjct: 277 DELAKMGLPQISGNMTYLEA 296
>gi|344247089|gb|EGW03193.1| ATP-binding cassette sub-family G member 8 [Cricetulus griseus]
Length = 951
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 106/192 (55%), Gaps = 17/192 (8%)
Query: 88 WELGSGTSRLEV-----ASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 142
W+ G T E+ +LFSS ++ + F++VL+LDLS+ N LW E L ++
Sbjct: 92 WKKGKVTEVKEMELKLEKNLFSSLAVKMGT-FSVVLVLDLSKPNDLWPTMENLLQATKSH 150
Query: 143 FE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEP 193
+ ++++ E R D H D+ LI FP+PL++IG KYD+F++ +P
Sbjct: 151 IDKVIMKLGKTNSKAASEMRQKMWSVMQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDP 209
Query: 194 NKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPI 253
K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D NKP+
Sbjct: 210 EKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVDQNKPL 268
Query: 254 FVPFGTDSVASI 265
F+ G DS+ I
Sbjct: 269 FITAGLDSLCQI 280
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 25/221 (11%)
Query: 396 WELGSGTSRLEV-----ASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
W+ G T E+ +LFSS ++ + F++VL+LDLS+ N LW E L +A
Sbjct: 92 WKKGKVTEVKEMELKLEKNLFSSLAVKMGT-FSVVLVLDLSKPNDLWPTMENLL---QAT 147
Query: 451 FESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLI 510
+ V K G + + A E R K + D+ LI FP+PL+
Sbjct: 148 KSHIDKVIMKLGK-TNSKAASEMRQK-----------MWSVMQKDHPDRELIDPFPIPLV 195
Query: 511 LIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
+IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+ + R ++N AF
Sbjct: 196 IIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGI 254
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGR 611
+ ++ D NKP+F+ G DS+ I D+++G+
Sbjct: 255 DKSKSICVDQNKPLFITAGLDSLCQIGSPP---VPDSDIGK 292
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 94/165 (56%), Gaps = 11/165 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+
Sbjct: 183 DRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 241
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS+ I + + S ++
Sbjct: 242 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMEL 301
Query: 827 YKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQK 869
+K ++ F P ++ S K+ DPA D Y+E +D +R QK
Sbjct: 302 WKKVYEKLF----PPKSISTLKAIQDPARDPQYAESEVDEMRVQK 342
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 205 QDFDPEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 263
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS+ I G+ +DI L
Sbjct: 264 QNKPLFITAGLDSLCQI-GSPPVPDSDIGKL 293
>gi|268559480|ref|XP_002637731.1| C. briggsae CBR-XBX-1 protein [Caenorhabditis briggsae]
Length = 366
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 120/219 (54%), Gaps = 21/219 (9%)
Query: 66 LALEYIYARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFT--LVLMLDLS 123
+ LE+ YAR++ V KD+ +LWELG G+S E+ S+ +TA++ T L+++LD++
Sbjct: 72 IGLEFTYARRTRGNV-KDVANLWELGGGSSVTELLSV----PITAKNVETCSLIVLLDMT 126
Query: 124 RLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDK---------GLIRTF 174
L+ +W E + R + E+ E++ + R A++ R + +
Sbjct: 127 NLSEMWITIEKTVDTVRRLVEN----LERQDANLQTRMAEKSRLRLEKYESSSLKMCAPC 182
Query: 175 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 234
P+P+ ++ KYD F+N E K+R Q LR+LA+ GA+L+ +SS K +++++H
Sbjct: 183 PLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNMISH 242
Query: 235 YAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTHGKD 273
+AF + D+NKP+F+ G D++ +I G G D
Sbjct: 243 FAFGTVCPQGYITDHNKPMFIKCGFDNLEAI-GIPPGSD 280
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 24/208 (11%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFT--LVLMLDLSRLNSLWTEAETFLAKFR 448
D+ +LWELG G+S E+ S+ +TA++ T L+++LD++ L+ +W E + R
Sbjct: 88 DVANLWELGGGSSVTELLSV----PITAKNVETCSLIVLLDMTNLSEMWITIEKTVDTVR 143
Query: 449 AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
+ E+ E++ + R A++ R L KY+ K + P+P
Sbjct: 144 RLVEN----LERQDANLQTRMAEKSR-------------LRLEKYESSSLK-MCAPCPLP 185
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
+ ++ KYD F+N E K+R Q LR+LA+ GA+L+ +SS K +++++H+AF
Sbjct: 186 MTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNMISHFAF 245
Query: 569 SSHLASAVNFDYNKPIFVPFGTDSVASI 596
+ D+NKP+F+ G D++ +I
Sbjct: 246 GTVCPQGYITDHNKPMFIKCGFDNLEAI 273
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 90/160 (56%), Gaps = 6/160 (3%)
Query: 719 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 778
P+P+ ++ KYD F+N E K+R Q LR+LA+ GA+L+ +SS K +++++H
Sbjct: 183 PLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNMISH 242
Query: 779 YAFSSHLASAVNFDYNKPIFVPFGTDSVASI---EGTTQYVTAGSTSSLDKYKHIFTTHF 835
+AF + D+NKP+F+ G D++ +I G+ ++ G++S + ++ F + +
Sbjct: 243 FAFGTVCPQGYITDHNKPMFIKCGFDNLEAIGIPPGSDNFM--GASSPFNLWRESFISLW 300
Query: 836 LQDDPSQN-KSKSAPDPALDQNYSEPVIDSLRNQKLEQLD 874
Q + + + DP +D + EP ID+L K ++L+
Sbjct: 301 PQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELE 340
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+N E K+R Q LR+LA+ GA+L+ +SS K +++++H+AF + D
Sbjct: 197 QNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNMISHFAFGTVCPQGYITD 256
Query: 365 YNKPIFVPFGTDSVASI 381
+NKP+F+ G D++ +I
Sbjct: 257 HNKPMFIKCGFDNLEAI 273
>gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus]
Length = 233
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 709 FEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGL 768
+D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F +S L
Sbjct: 50 LKDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMF-TSKSEAL 108
Query: 769 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEG----TTQYVTAGSTSSL 824
+ + R ++N AF + ++ D NKP+F+ G DS+ I + + S +
Sbjct: 109 LLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPM 168
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+ +K ++ F S K+ DPA D Y+E +D +R QK ++L+ +R
Sbjct: 169 ELWKKVYDKLF--PPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKR 220
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 496 FEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGL 555
+D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F +S L
Sbjct: 50 LKDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMF-TSKSEAL 108
Query: 556 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGR 611
+ + R ++N AF + ++ D NKP+F+ G DS+ I D+++G+
Sbjct: 109 LLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPP---VPDSDIGK 161
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 154 GSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGAS 213
G +H + +D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GAS
Sbjct: 39 GLNQHTNHSRHLKDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGAS 98
Query: 214 LLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
L+F +S L+ + R ++N AF + ++ D NKP+F+ G DS+ I
Sbjct: 99 LMF-TSKSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQI 149
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K+++ + LR++AH GASL+F +S L+ + R ++N AF + ++ D
Sbjct: 74 QDFDPEKRKVICKTLRFVAHYYGASLMF-TSKSEALLLKIRGVINQLAFGIDKSKSICVD 132
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS+ I G+ +DI L
Sbjct: 133 QNKPLFITAGLDSLCQI-GSPPVPDSDIGKL 162
>gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila]
gi|89300006|gb|EAR97994.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila
SB210]
Length = 487
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 28/256 (10%)
Query: 35 ERTLLLIGTKSVGKSTLV--FRFLEK-NDTPKPTLALEYIYARKSGKTVMKDICHLWELG 91
E+TL++IG K GK+T V + +++ +D PT+ L+Y Y R++ K++ H +ELG
Sbjct: 43 EKTLVVIGDKGSGKTTFVNILKNMQQVDDRYIPTVGLDYQYVRRTNAN-RKELIHSYELG 101
Query: 92 SGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE------- 144
G + ++ ++ S + F +L+LDLS+ + + A + + R +
Sbjct: 102 GGKEQSKMITIPIS-KQNFRDAF-YILVLDLSKPHQIIESATFWFEEIRRQIDQFNLTAF 159
Query: 145 SNESVREKRGSFEHFRTA--DEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQC 202
+ ++R +FE + A + H DK ++ P+ I+IG KYDLFE + ++ +
Sbjct: 160 TTPEENDQRSNFEFAQQARFESHPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRT 219
Query: 203 LRYLAHVNGASLLF-------------HSSLDPGLVKRTRDILNHYAFSSHLASAVNFDY 249
LRYLAHVNGASL F H+ + L + R I+N+ F LA ++
Sbjct: 220 LRYLAHVNGASLYFASSNTQIHVLFNQHNKRNNDLFQNVRSIMNNALFGKTLAQYYQSEH 279
Query: 250 NKPIFVPFGTDSVASI 265
+PI + D +A +
Sbjct: 280 LRPIEISLSKDELAKM 295
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 17/189 (8%)
Query: 704 GKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLF--- 760
+++ DK ++ P+ I+IG KYDLFE + ++ + LRYLAHVNGASL F
Sbjct: 177 ARFESHPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASS 236
Query: 761 ----------HSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE 810
H+ + L + R I+N+ F LA ++ +PI + D +A +
Sbjct: 237 NTQIHVLFNQHNKRNNDLFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDELAKM- 295
Query: 811 GTTQYVTAGSTSSLDKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKL 870
G Q +G+ + L+ +K + F ++ +QN + P L + + E IDS+R +K
Sbjct: 296 GLPQ--ISGNMTYLEAFKKVIQETFPENKGAQNDASQDP-LRLMEKFPEARIDSIRAEKD 352
Query: 871 EQLDQMRRE 879
+++ + +E
Sbjct: 353 KEMKAISKE 361
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
++ H +ELG G + ++ ++ S + F +L+LDLS+ + + E+ TF
Sbjct: 93 ELIHSYELGGGKEQSKMITIPIS-KQNFRDAF-YILVLDLSKPHQI-IESATFWF----- 144
Query: 451 FESNESVREKRGSFE--HFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
E +R + F F T +E+ + +++ DK ++ P+
Sbjct: 145 ----EEIRRQIDQFNLTAFTTPEENDQRSNFE------FAQQARFESHPDKNRVKILPIQ 194
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLF-------------HSSLDPGL 555
I+IG KYDLFE + ++ + LRYLAHVNGASL F H+ + L
Sbjct: 195 TIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSNTQIHVLFNQHNKRNNDL 254
Query: 556 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA-----SIEGTTQYVTA 605
+ R I+N+ F LA ++ +PI + D +A I G Y+ A
Sbjct: 255 FQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNMTYLEA 309
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 316 VQCLRYLAHVNGASLLF-------------HSSLDPGLVKRTRDILNHYAFSSHLASAVN 362
+ LRYLAHVNGASL F H+ + L + R I+N+ F LA
Sbjct: 217 TRTLRYLAHVNGASLYFASSNTQIHVLFNQHNKRNNDLFQNVRSIMNNALFGKTLAQYYQ 276
Query: 363 FDYNKPIFVPFGTDSVA-----SIEGTTQYVTA 390
++ +PI + D +A I G Y+ A
Sbjct: 277 SEHLRPIEISLSKDELAKMGLPQISGNMTYLEA 309
>gi|390474519|ref|XP_002757834.2| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1
[Callithrix jacchus]
Length = 244
Score = 105 bits (262), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ +I FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F +S L+
Sbjct: 63 DREIIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMF-TSKSEALLL 121
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEG----TTQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS + I + S ++
Sbjct: 122 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFSQIGSPPIPENDIGKLHAHSPMEL 181
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 182 WKKVYEKLF--PPKSINTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKR 231
Score = 104 bits (259), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 11/161 (6%)
Query: 114 FTLVLMLDLSRLNSLWTEAETFLAKFRAIFE---------SNESVREKRGSFEHFRTADE 164
F+LVL+LDLS+ N LW E L ++ + ++++V E R + D
Sbjct: 2 FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKMNSKAVSEMRQKIWNNMQKD- 60
Query: 165 HRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGL 224
H D+ +I FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F +S L
Sbjct: 61 HPDREIIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMF-TSKSEAL 119
Query: 225 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
+ + R ++N AF + ++ D NKP+F+ G DS + I
Sbjct: 120 LLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFSQI 160
Score = 96.3 bits (238), Expect = 6e-17, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 22/178 (12%)
Query: 422 FTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDK---GL 478
F+LVL+LDLS+ N LW E L +A + V K G + E R K +
Sbjct: 2 FSLVLVLDLSKPNDLWPTMENLL---QATKSHVDKVIMKLGKMNS-KAVSEMRQKIWNNM 57
Query: 479 IRTFPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLA 538
+ P D+ +I FPVPL++IG KYD+F++ E K+++ + LR++A
Sbjct: 58 QKDHP--------------DREIIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVA 103
Query: 539 HVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
H GASL+F +S L+ + R ++N AF + ++ D NKP+F+ G DS + I
Sbjct: 104 HYYGASLMF-TSKSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFSQI 160
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F +S L+ + R ++N AF + ++ D
Sbjct: 85 QDFESEKRKVICKTLRFVAHYYGASLMF-TSKSEALLLKIRGVINQLAFGIDKSKSICVD 143
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS + I
Sbjct: 144 QNKPLFITAGLDSFSQI 160
>gi|325189952|emb|CCA24434.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 786
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 29/291 (9%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLV--FRFLEKNDT 61
K + I + L H K S+ E + ++ L++G+K GK+TL+ R K D
Sbjct: 13 KDIWSILMSLDHAKR---SAEEQMCQTSEEKDTATLVVGSKGSGKTTLIATLRGSTKVDD 69
Query: 62 PKPTLALEY--IYARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLM 119
KPT AL+Y + +++GK + H+WEL + + + S SG +V+
Sbjct: 70 IKPTTALDYSNVRIKRAGKV---PVAHIWELATTQCIEGMIRIPLSTERVVNSG--IVIT 124
Query: 120 LDLS---RLNSLWTEAETFLAKF-RAIFESNESVREKRGSFEHFRT------ADEHRDKG 169
+DLS + S T L + I + E + + + R H+D+
Sbjct: 125 IDLSIPGDVVSYLVYYVTLLYRVVDEIIKKKEKNPNDKIAIDRLREEAAARFGRAHQDRN 184
Query: 170 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 229
+ FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ + R
Sbjct: 185 DVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFHTSFR 244
Query: 230 DILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG------TTHGKD 273
++ + F S D +P+FVP G+DS A I G TT+ KD
Sbjct: 245 SMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGGPKSFKPTTYTKD 295
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D+ + FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ +
Sbjct: 181 QDRNDVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFH 240
Query: 770 KRTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG-----TTQYVTAGSTSS 823
R ++ + F S D +P+FVP G+DS A I G T Y
Sbjct: 241 TSFRSMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGGPKSFKPTTYTKDQHEQR 300
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPA-----LDQNYSEPVIDSLRNQKLEQLDQMRR 878
+++K + ++ D + +S + + + + EP+ID +R +K +L++ ++
Sbjct: 301 ANQWKRVAAEYYAASDSVKEIIESESESGSKFGKVSEIFPEPMIDQMRARKTMELERYQK 360
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 497 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 556
+D+ + FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ +
Sbjct: 181 QDRNDVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFH 240
Query: 557 KRTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG 598
R ++ + F S D +P+FVP G+DS A I G
Sbjct: 241 TSFRSMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGG 283
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAV-NF 363
R+ + K++ Q +RYLAH+ GA+LLF S+ + R ++ + F S
Sbjct: 204 RDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFHTSFRSMMKSFVFHSASGKVTKEV 263
Query: 364 DYNKPIFVPFGTDSVASIEG 383
D +P+FVP G+DS A I G
Sbjct: 264 DSARPLFVPVGSDSFAEIGG 283
>gi|325189954|emb|CCA24436.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 792
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 29/291 (9%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLV--FRFLEKNDT 61
K + I + L H K S+ E + ++ L++G+K GK+TL+ R K D
Sbjct: 13 KDIWSILMSLDHAKR---SAEEQMCQTSEEKDTATLVVGSKGSGKTTLIATLRGSTKVDD 69
Query: 62 PKPTLALEY--IYARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLM 119
KPT AL+Y + +++GK + H+WEL + + + S SG +V+
Sbjct: 70 IKPTTALDYSNVRIKRAGKV---PVAHIWELATTQCIEGMIRIPLSTERVVNSG--IVIT 124
Query: 120 LDLS---RLNSLWTEAETFLAKF-RAIFESNESVREKRGSFEHFRT------ADEHRDKG 169
+DLS + S T L + I + E + + + R H+D+
Sbjct: 125 IDLSIPGDVVSYLVYYVTLLYRVVDEIIKKKEKNPNDKIAIDRLREEAAARFGRAHQDRN 184
Query: 170 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 229
+ FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ + R
Sbjct: 185 DVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFHTSFR 244
Query: 230 DILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG------TTHGKD 273
++ + F S D +P+FVP G+DS A I G TT+ KD
Sbjct: 245 SMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGGPKSFKPTTYTKD 295
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D+ + FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ +
Sbjct: 181 QDRNDVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFH 240
Query: 770 KRTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG-----TTQYVTAGSTSS 823
R ++ + F S D +P+FVP G+DS A I G T Y
Sbjct: 241 TSFRSMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGGPKSFKPTTYTKDQHEQR 300
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPA-----LDQNYSEPVIDSLRNQKLEQLDQMRR 878
+++K + ++ D + +S + + + + EP+ID +R +K +L++ ++
Sbjct: 301 ANQWKRVAAEYYAASDSVKEIIESESESGSKFGKVSEIFPEPMIDQMRARKTMELERYQK 360
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 497 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 556
+D+ + FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ +
Sbjct: 181 QDRNDVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFH 240
Query: 557 KRTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG 598
R ++ + F S D +P+FVP G+DS A I G
Sbjct: 241 TSFRSMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGG 283
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAV-NF 363
R+ + K++ Q +RYLAH+ GA+LLF S+ + R ++ + F S
Sbjct: 204 RDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFHTSFRSMMKSFVFHSASGKVTKEV 263
Query: 364 DYNKPIFVPFGTDSVASIEG 383
D +P+FVP G+DS A I G
Sbjct: 264 DSARPLFVPVGSDSFAEIGG 283
>gi|325189951|emb|CCA24433.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 799
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 29/291 (9%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLV--FRFLEKNDT 61
K + I + L H K S+ E + ++ L++G+K GK+TL+ R K D
Sbjct: 26 KDIWSILMSLDHAKR---SAEEQMCQTSEEKDTATLVVGSKGSGKTTLIATLRGSTKVDD 82
Query: 62 PKPTLALEY--IYARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLM 119
KPT AL+Y + +++GK + H+WEL + + + S SG +V+
Sbjct: 83 IKPTTALDYSNVRIKRAGKV---PVAHIWELATTQCIEGMIRIPLSTERVVNSG--IVIT 137
Query: 120 LDLS---RLNSLWTEAETFLAKF-RAIFESNESVREKRGSFEHFRT------ADEHRDKG 169
+DLS + S T L + I + E + + + R H+D+
Sbjct: 138 IDLSIPGDVVSYLVYYVTLLYRVVDEIIKKKEKNPNDKIAIDRLREEAAARFGRAHQDRN 197
Query: 170 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 229
+ FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ + R
Sbjct: 198 DVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFHTSFR 257
Query: 230 DILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG------TTHGKD 273
++ + F S D +P+FVP G+DS A I G TT+ KD
Sbjct: 258 SMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGGPKSFKPTTYTKD 308
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D+ + FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ +
Sbjct: 194 QDRNDVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFH 253
Query: 770 KRTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG-----TTQYVTAGSTSS 823
R ++ + F S D +P+FVP G+DS A I G T Y
Sbjct: 254 TSFRSMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGGPKSFKPTTYTKDQHEQR 313
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPA-----LDQNYSEPVIDSLRNQKLEQLDQMRR 878
+++K + ++ D + +S + + + + EP+ID +R +K +L++ ++
Sbjct: 314 ANQWKRVAAEYYAASDSVKEIIESESESGSKFGKVSEIFPEPMIDQMRARKTMELERYQK 373
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 497 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 556
+D+ + FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ +
Sbjct: 194 QDRNDVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFH 253
Query: 557 KRTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG 598
R ++ + F S D +P+FVP G+DS A I G
Sbjct: 254 TSFRSMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGG 296
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAV-NF 363
R+ + K++ Q +RYLAH+ GA+LLF S+ + R ++ + F S
Sbjct: 217 RDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFHTSFRSMMKSFVFHSASGKVTKEV 276
Query: 364 DYNKPIFVPFGTDSVASIEG 383
D +P+FVP G+DS A I G
Sbjct: 277 DSARPLFVPVGSDSFAEIGG 296
>gi|325189953|emb|CCA24435.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 805
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 29/291 (9%)
Query: 4 KSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLV--FRFLEKNDT 61
K + I + L H K S+ E + ++ L++G+K GK+TL+ R K D
Sbjct: 26 KDIWSILMSLDHAKR---SAEEQMCQTSEEKDTATLVVGSKGSGKTTLIATLRGSTKVDD 82
Query: 62 PKPTLALEY--IYARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLM 119
KPT AL+Y + +++GK + H+WEL + + + S SG +V+
Sbjct: 83 IKPTTALDYSNVRIKRAGKV---PVAHIWELATTQCIEGMIRIPLSTERVVNSG--IVIT 137
Query: 120 LDLS---RLNSLWTEAETFLAKF-RAIFESNESVREKRGSFEHFRT------ADEHRDKG 169
+DLS + S T L + I + E + + + R H+D+
Sbjct: 138 IDLSIPGDVVSYLVYYVTLLYRVVDEIIKKKEKNPNDKIAIDRLREEAAARFGRAHQDRN 197
Query: 170 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTR 229
+ FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ + R
Sbjct: 198 DVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFHTSFR 257
Query: 230 DILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG------TTHGKD 273
++ + F S D +P+FVP G+DS A I G TT+ KD
Sbjct: 258 SMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGGPKSFKPTTYTKD 308
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 769
+D+ + FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ +
Sbjct: 194 QDRNDVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFH 253
Query: 770 KRTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG-----TTQYVTAGSTSS 823
R ++ + F S D +P+FVP G+DS A I G T Y
Sbjct: 254 TSFRSMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGGPKSFKPTTYTKDQHEQR 313
Query: 824 LDKYKHIFTTHFLQDDPSQNKSKSAPDPA-----LDQNYSEPVIDSLRNQKLEQLDQMRR 878
+++K + ++ D + +S + + + + EP+ID +R +K +L++ ++
Sbjct: 314 ANQWKRVAAEYYAASDSVKEIIESESESGSKFGKVSEIFPEPMIDQMRARKTMELERYQK 373
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 497 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLV 556
+D+ + FPVPL++IG KYD+F + + K++ Q +RYLAH+ GA+LLF S+ +
Sbjct: 194 QDRNDVTLFPVPLLIIGNKYDVFRDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFH 253
Query: 557 KRTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASIEG 598
R ++ + F S D +P+FVP G+DS A I G
Sbjct: 254 TSFRSMMKSFVFHSASGKVTKEVDSARPLFVPVGSDSFAEIGG 296
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAV-NF 363
R+ + K++ Q +RYLAH+ GA+LLF S+ + R ++ + F S
Sbjct: 217 RDEDSVKRKGINQAIRYLAHMYGATLLFTSTKEKAFHTSFRSMMKSFVFHSASGKVTKEV 276
Query: 364 DYNKPIFVPFGTDSVASIEG 383
D +P+FVP G+DS A I G
Sbjct: 277 DSARPLFVPVGSDSFAEIGG 296
>gi|303288077|ref|XP_003063327.1| cytoplasmic dynein 2 light intermediate chain 1 [Micromonas pusilla
CCMP1545]
gi|226455159|gb|EEH52463.1| cytoplasmic dynein 2 light intermediate chain 1 [Micromonas pusilla
CCMP1545]
Length = 536
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 16/199 (8%)
Query: 38 LLLIGTKSVGKSTLVFRFL--EKNDTPKPTLALEYIYARKSGKTVM--KDICHLWELGSG 93
++G GKSTLV RFL +K D PKPT +EY YARK+ T + KD+ H+WE+ +G
Sbjct: 70 CFVVGAARSGKSTLVSRFLFPDKRDAPKPTEGMEYNYARKTHATNVERKDVAHVWEI-AG 128
Query: 94 TSRLEVASLFSSFSLTAQSGFT---LVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVR 150
+ R A T +V++LDLSR + E +L + + + +
Sbjct: 129 SRRFADACTEQDNVFMGMRHVTTAVVVIVLDLSRPHEALPTLEYWLERVKCRTRATFAKL 188
Query: 151 EKRGSF--EHFRT------ADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQC 202
EKRGS E RT H D G +R V ++++ KYD FE + K+I +
Sbjct: 189 EKRGSKLPEQLRTRSAKTFGQTHEDVGHVRHLGVTVVVVAAKYDAFERADAELKKIMSRA 248
Query: 203 LRYLAHVNGASLLFHSSLD 221
LR+ H +GASL + S L+
Sbjct: 249 LRHACHAHGASLFYTSGLN 267
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFT---LVLMLDLSRLNSLWTEAETFLAKF 447
D+ H+WE+ +G+ R A T +V++LDLSR + E +L +
Sbjct: 119 DVAHVWEI-AGSRRFADACTEQDNVFMGMRHVTTAVVVIVLDLSRPHEALPTLEYWLERV 177
Query: 448 RAIFESNESVREKRGSF--EHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTF 505
+ + + EKRGS E RT +TF ED G +R
Sbjct: 178 KCRTRATFAKLEKRGSKLPEQLRTRS-------AKTF----------GQTHEDVGHVRHL 220
Query: 506 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLD 552
V ++++ KYD FE + K+I + LR+ H +GASL + S L+
Sbjct: 221 GVTVVVVAAKYDAFERADAELKKIMSRALRHACHAHGASLFYTSGLN 267
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 710 EDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLD 765
ED G +R V ++++ KYD FE + K+I + LR+ H +GASL + S L+
Sbjct: 212 EDVGHVRHLGVTVVVVAAKYDAFERADAELKKIMSRALRHACHAHGASLFYTSGLN 267
>gi|323453234|gb|EGB09106.1| hypothetical protein AURANDRAFT_2677, partial [Aureococcus
anophagefferens]
Length = 259
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 42/260 (16%)
Query: 39 LLIGTKSVGKSTLVFRFLEK--NDTPKPTLALEYIYARKSGKT-VMKDICHLWELGSGTS 95
L +G + GKS+L+ + PKPT+ALEY++AR+S T KD+ H+WELG G
Sbjct: 1 LFVGQQGSGKSSLLALLQPSVAKEAPKPTVALEYVFARRSRTTSAAKDVAHIWELGGGMG 60
Query: 96 RLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAETFLAKFRAIFES--NESVRE 151
L +T T VL +LDLS+ +++ +L RA + +E R+
Sbjct: 61 FETGRELLVGVPITPARLRTAVLGVVLDLSKPHNVVYTCVHWLKILRAHVAATLDELRRD 120
Query: 152 KRGSFEHFRTAD-----------------------EHRDKGLIRTFPVPLILIGGKYDLF 188
+G +TAD EH D+ + PVP++++ K+D+
Sbjct: 121 NKG-----KTADGLAEQARARFAERKPDKKGDKPGEHPDRRTVDPSPVPILIVANKWDVL 175
Query: 189 --ENLEPNKKRIAV----QCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLA 242
E + K R+A+ Q LR+LAH +GA+L+F SS D L K R++L++ F
Sbjct: 176 GEEGNDLGKDRLALKALCQVLRFLAHQHGATLVFTSSKDAALTKTFRNLLSYALFHKVDK 235
Query: 243 S-AVNFDYNKPIFVPFGTDS 261
S V + +KP++VP G D+
Sbjct: 236 SYRVEKNADKPLYVPPGGDT 255
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 385 TQYVTADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAET 442
T D+ H+WELG G L +T T VL +LDLS+ +++
Sbjct: 42 TTSAAKDVAHIWELGGGMGFETGRELLVGVPITPARLRTAVLGVVLDLSKPHNVVYTCVH 101
Query: 443 FLAKFRAIFES--NESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKG 500
+L RA + +E R+ +G +TAD ++ R G K D+
Sbjct: 102 WLKILRAHVAATLDELRRDNKG-----KTADGLAEQARARFAERKPDKKGDKPGEHPDRR 156
Query: 501 LIRTFPVPLILIGGKYDLF--ENLEPNKKRIAV----QCLRYLAHVNGASLLFHSSLDPG 554
+ PVP++++ K+D+ E + K R+A+ Q LR+LAH +GA+L+F SS D
Sbjct: 157 TVDPSPVPILIVANKWDVLGEEGNDLGKDRLALKALCQVLRFLAHQHGATLVFTSSKDAA 216
Query: 555 LVKRTRDILNHYAFSSHLAS-AVNFDYNKPIFVPFGTDS 592
L K R++L++ F S V + +KP++VP G D+
Sbjct: 217 LTKTFRNLLSYALFHKVDKSYRVEKNADKPLYVPPGGDT 255
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 703 GGKYDLFEDKGLIRTFPVPLILIGGKYDLF--ENLEPNKKRIAV----QCLRYLAHVNGA 756
G K D+ + PVP++++ K+D+ E + K R+A+ Q LR+LAH +GA
Sbjct: 146 GDKPGEHPDRRTVDPSPVPILIVANKWDVLGEEGNDLGKDRLALKALCQVLRFLAHQHGA 205
Query: 757 SLLFHSSLDPGLVKRTRDILNHYAFSSHLAS-AVNFDYNKPIFVPFGTDS 805
+L+F SS D L K R++L++ F S V + +KP++VP G D+
Sbjct: 206 TLVFTSSKDAALTKTFRNLLSYALFHKVDKSYRVEKNADKPLYVPPGGDT 255
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 310 NKKRIAV----QCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLAS-AVNFD 364
K R+A+ Q LR+LAH +GA+L+F SS D L K R++L++ F S V +
Sbjct: 183 GKDRLALKALCQVLRFLAHQHGATLVFTSSKDAALTKTFRNLLSYALFHKVDKSYRVEKN 242
Query: 365 YNKPIFVPFGTDS 377
+KP++VP G D+
Sbjct: 243 ADKPLYVPPGGDT 255
>gi|194376484|dbj|BAG63001.1| unnamed protein product [Homo sapiens]
Length = 225
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 44 DHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 102
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI------EGTTQYVTAGSTSSL 824
+ R ++N AF + ++ D NKP+F+ G DS I E + A S L
Sbjct: 103 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 162
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK +L+Q +R
Sbjct: 163 --WKKVYEKLFPPK--SINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKR 212
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 164 EHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPG 223
+H D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S +
Sbjct: 41 DHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-A 99
Query: 224 LVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
L+ + R ++N AF + ++ D NKP+F+ G DS I
Sbjct: 100 LLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQI 141
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+
Sbjct: 44 DHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLL 102
Query: 558 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+ R ++N AF + ++ D NKP+F+ G DS I + ++G+ H
Sbjct: 103 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPP---VPENDIGKLH 155
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+ + R ++N AF + ++ D
Sbjct: 66 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSE-ALLLKIRGVINQLAFGIDKSKSICVD 124
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADICHL 395
NKP+F+ G DS I G+ DI L
Sbjct: 125 QNKPLFITAGLDSFGQI-GSPPVPENDIGKL 154
>gi|348667597|gb|EGZ07422.1| hypothetical protein PHYSODRAFT_527996 [Phytophthora sojae]
Length = 381
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 127/277 (45%), Gaps = 29/277 (10%)
Query: 39 LLIGTKSVGKSTLV--FRFLEKNDTPKPTLALEYIYAR--KSGKTVMKDICHLWELGSGT 94
L++G + GK++L FR K + KPT AL+Y++ R +G+ + H+WEL S
Sbjct: 50 LIVGPRGSGKTSLTANFRNSSKAEEIKPTTALDYVFVRLRTAGRPA---VAHMWELASTK 106
Query: 95 SRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRG 154
E+ + LV++LDLS + +L + + V+EK
Sbjct: 107 CVHEMIKVPLGPERILNGA--LVIVLDLSAPGDVVPALVKWLTTLYTVVQEVLKVKEK-N 163
Query: 155 SFEHF-----------RTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
E F R H DK + P+P++++G KY+ F + + K++ Q +
Sbjct: 164 PVEKFAVDALKQEAMARYGSAHPDKDEVTPLPLPVLVMGNKYETFRDEDSIKRKGVTQAV 223
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL-ASAVNFDYNKPIFVPFGTDSV 262
RYL+H+ GAS+LF S D LV + R ++ +AF + ++ D KP+FVP G D
Sbjct: 224 RYLSHMYGASVLFTSMKDKNLVNQFRSVMKGFAFRAMARGTSKEVDPAKPLFVPAGADLF 283
Query: 263 ASIEGTTHGKDASLESGGRGFNRSRGMKFEKKRGWIE 299
I G +G R + EK R WI+
Sbjct: 284 EDI-GIPKS------AGWRQDRFGKDQHEEKARQWIK 313
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 33/201 (16%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
DK + P+P++++G KY+ F + + K++ Q +RYL+H+ GAS+LF S D LV
Sbjct: 187 DKDEVTPLPLPVLVMGNKYETFRDEDSIKRKGVTQAVRYLSHMYGASVLFTSMKDKNLVN 246
Query: 771 RTRDILNHYAFSSHL-ASAVNFDYNKPIFVPFGTDSVASI-------------------E 810
+ R ++ +AF + ++ D KP+FVP G D I E
Sbjct: 247 QFRSVMKGFAFRAMARGTSKEVDPAKPLFVPAGADLFEDIGIPKSAGWRQDRFGKDQHEE 306
Query: 811 GTTQYVTAGSTSSLDKYKHIFTT--HFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQ 868
Q++ S + T+ QDD +S + + EP ID R Q
Sbjct: 307 KARQWIKVASEYYPPSADDLLTSKEQSEQDDKDGEESPN--------QFPEPNIDRARQQ 358
Query: 869 KLEQLDQMRREVDMKDKYRTR 889
K E+L RR D + K R R
Sbjct: 359 KREEL---RRYRDNQRKARER 376
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 392 ICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIF 451
+ H+WEL S E+ + LV++LDLS + +L +
Sbjct: 96 VAHMWELASTKCVHEMIKVPLGPERILNGA--LVIVLDLSAPGDVVPALVKWLTTLYTVV 153
Query: 452 ESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLIL 511
+ V+EK E F D + + + R G + DK + P+P+++
Sbjct: 154 QEVLKVKEK-NPVEKF-AVDALKQEAMAR--------YGSAH---PDKDEVTPLPLPVLV 200
Query: 512 IGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSH 571
+G KY+ F + + K++ Q +RYL+H+ GAS+LF S D LV + R ++ +AF +
Sbjct: 201 MGNKYETFRDEDSIKRKGVTQAVRYLSHMYGASVLFTSMKDKNLVNQFRSVMKGFAFRAM 260
Query: 572 L-ASAVNFDYNKPIFVPFGTD 591
++ D KP+FVP G D
Sbjct: 261 ARGTSKEVDPAKPLFVPAGAD 281
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 303 TARNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL-ASAV 361
T R+ + K++ Q +RYL+H+ GAS+LF S D LV + R ++ +AF + ++
Sbjct: 207 TFRDEDSIKRKGVTQAVRYLSHMYGASVLFTSMKDKNLVNQFRSVMKGFAFRAMARGTSK 266
Query: 362 NFDYNKPIFVPFGTD 376
D KP+FVP G D
Sbjct: 267 EVDPAKPLFVPAGAD 281
>gi|301110260|ref|XP_002904210.1| Dynein 1b Light Intermediate Chain [Phytophthora infestans T30-4]
gi|262096336|gb|EEY54388.1| Dynein 1b Light Intermediate Chain [Phytophthora infestans T30-4]
Length = 382
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 118/238 (49%), Gaps = 22/238 (9%)
Query: 39 LLIGTKSVGKSTLV--FRFLEKNDTPKPTLALEYIYAR-KSGKTVMKDICHLWELGSGTS 95
L++G + GK++L FR K + KPT AL+Y++ R ++G + H+WEL S
Sbjct: 48 LIVGPRGSGKTSLTANFRNSSKAEEIKPTTALDYVFVRLRTGG--RPSVAHMWELASTKC 105
Query: 96 RLEVASLFSSFSLTAQSGFTLVLMLDLSR-----------LNSLWTEAETFL-AKFRAIF 143
E+ + LV++LDLS L +L+T + L AK +
Sbjct: 106 VNELIKV--PLGPERILNGALVIVLDLSTPGDVVPALVKWLTTLYTAVQEVLKAKEKNPV 163
Query: 144 ESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
E KR + + + H DK + P+P++++G KY+ F + + K++ Q +
Sbjct: 164 EKIAVDTLKRDAMASY--GNGHPDKDEVTPLPLPVLVVGNKYETFRDEDSIKRKGVTQAV 221
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTD 260
RYL+H+ GAS+LF S D LV + R ++ +AF + A D KP+FVP G D
Sbjct: 222 RYLSHMYGASVLFTSMKDKNLVTQFRSVMKGFAFRAMARGASKEVDPAKPLFVPAGAD 279
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
DK + P+P++++G KY+ F + + K++ Q +RYL+H+ GAS+LF S D LV
Sbjct: 185 DKDEVTPLPLPVLVVGNKYETFRDEDSIKRKGVTQAVRYLSHMYGASVLFTSMKDKNLVT 244
Query: 771 RTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTDSVASI-------------------E 810
+ R ++ +AF + A D KP+FVP G D I E
Sbjct: 245 QFRSVMKGFAFRAMARGASKEVDPAKPLFVPAGADLFEDIGVPKSAAWRQDRFGKDQHEE 304
Query: 811 GTTQYVTAGS---TSSLDKYKHIFTTHF--LQDDPSQNKSKSAPDPALDQNYSEPVIDSL 865
Q++ S + S+D + + T QDD +S S + EP ID
Sbjct: 305 KARQWIKISSEYYSPSVDIAESLLTQKEGGEQDDKDAEESSS--------QFPEPNIDRA 356
Query: 866 RNQKLEQLDQMRREVDMKDKYRTR 889
R QK E+L RR D + K + R
Sbjct: 357 RQQKREEL---RRYRDNRRKAQER 377
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
DK + P+P++++G KY+ F + + K++ Q +RYL+H+ GAS+LF S D LV
Sbjct: 185 DKDEVTPLPLPVLVVGNKYETFRDEDSIKRKGVTQAVRYLSHMYGASVLFTSMKDKNLVT 244
Query: 558 RTRDILNHYAFSSHLASAV-NFDYNKPIFVPFGTD 591
+ R ++ +AF + A D KP+FVP G D
Sbjct: 245 QFRSVMKGFAFRAMARGASKEVDPAKPLFVPAGAD 279
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 303 TARNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAV- 361
T R+ + K++ Q +RYL+H+ GAS+LF S D LV + R ++ +AF + A
Sbjct: 205 TFRDEDSIKRKGVTQAVRYLSHMYGASVLFTSMKDKNLVTQFRSVMKGFAFRAMARGASK 264
Query: 362 NFDYNKPIFVPFGTD 376
D KP+FVP G D
Sbjct: 265 EVDPAKPLFVPAGAD 279
>gi|390359050|ref|XP_788980.3| PREDICTED: uncharacterized protein LOC584002 [Strongylocentrotus
purpuratus]
Length = 1004
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Query: 1 MGPKSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKND 60
+ KS+ DIAI A KH + S + + + E +L IG+K+ GK++++ RFLEK +
Sbjct: 138 LKEKSIWDIAILEAEQKHATESKEQGG--EAKGSENHILFIGSKNAGKTSIILRFLEKEE 195
Query: 61 TPKPTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLM 119
PKPT+ALEY + R++ G ++KDICH+WELG GT ++ + S S +L+++
Sbjct: 196 APKPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSS--SLMVV 253
Query: 120 LDLSRLNSLWTEAETFL 136
+DLS+ LW ET +
Sbjct: 254 MDLSQPYELWHTMETLI 270
>gi|403365291|gb|EJY82426.1| Cytoplasmic dynein 2 light intermediate chain 1 [Oxytricha
trifallax]
Length = 413
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 133/247 (53%), Gaps = 21/247 (8%)
Query: 33 SQERTLLLIGTKSVGKSTLVFRFLEK--NDTPKPTLALEYIYARKSGKTVMKDICHLWEL 90
SQE+T++ +G KS GKS+L+ +FL++ D K T AL++ Y + K K +++EL
Sbjct: 61 SQEKTVVFVGEKSSGKSSLISKFLDEPVKDDMKETTALDFRYGTRI-KDEKKQKVNIYEL 119
Query: 91 GSGTSRLEVASLFSSFSLTA--QSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNES 148
G G R+ VA+L ++ LTA S + ++LDLS + ++A R S ++
Sbjct: 120 GGG--RI-VANLLAA-PLTAFHISNSAVCIVLDLSSPGGAIDSLQYWIAVIRE--HSQKA 173
Query: 149 VREKRGS----FEHFRTA-----DEHRDKGLIRTFPVPLILIGGKYDLFEN-LEPNKKRI 198
+ E + + F+ + ++H D+ I VP+I+IG K+D+F N E KKR
Sbjct: 174 IEELQKTNPKVFQMMQQRVQERFEKHDDRNKINVSMVPIIVIGSKFDIFANQYESVKKRQ 233
Query: 199 AVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFG 258
LRY+ H NG L+F S + + + ++ + F S+L + V D+N+ + + G
Sbjct: 234 LCLALRYICHQNGCDLVFASVKEKLPSQLFKAMITRHVFDSNLQAKVEKDHNQALNIYAG 293
Query: 259 TDSVASI 265
+D+ +SI
Sbjct: 294 SDNFSSI 300
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 661 GWIIKILKWVVSSRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPV 720
G I + W+ R EH + A E K + F + + +++ +D+ I V
Sbjct: 154 GAIDSLQYWIAVIR---EHSQKAIEELQKTNPKVFQMMQQRVQERFEKHDDRNKINVSMV 210
Query: 721 PLILIGGKYDLFEN-LEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 779
P+I+IG K+D+F N E KKR LRY+ H NG L+F S + + + ++ +
Sbjct: 211 PIIVIGSKFDIFANQYESVKKRQLCLALRYICHQNGCDLVFASVKEKLPSQLFKAMITRH 270
Query: 780 AFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQDD 839
F S+L + V D+N+ + + G+D+ +SI G S ++ I F
Sbjct: 271 VFDSNLQAKVEKDHNQALNIYAGSDNFSSIGEPEGAGMRGKVSFEKLWQDIIEQQF---- 326
Query: 840 PSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRTR 889
P N ++ + Y+E ID++R QK E+L+Q ++E++ ++ ++
Sbjct: 327 PKANSNQQGVQLGDLKKYAEEKIDAMRQQKDEELEQYKKEIERSKRFESQ 376
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 394 HLWELGSGTSRLEVASLFSSFSLTA--QSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIF 451
+++ELG G R+ VA+L ++ LTA S + ++LDLS + ++A R
Sbjct: 115 NIYELGGG--RI-VANLLAA-PLTAFHISNSAVCIVLDLSSPGGAIDSLQYWIAVIR--- 167
Query: 452 ESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPLIL 511
EH + A E K + F + + +++ +D+ I VP+I+
Sbjct: 168 -------------EHSQKAIEELQKTNPKVFQMMQQRVQERFEKHDDRNKINVSMVPIIV 214
Query: 512 IGGKYDLFEN-LEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 570
IG K+D+F N E KKR LRY+ H NG L+F S + + + ++ + F S
Sbjct: 215 IGSKFDIFANQYESVKKRQLCLALRYICHQNGCDLVFASVKEKLPSQLFKAMITRHVFDS 274
Query: 571 HLASAVNFDYNKPIFVPFGTDSVASI 596
+L + V D+N+ + + G+D+ +SI
Sbjct: 275 NLQAKVEKDHNQALNIYAGSDNFSSI 300
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 302 VTARNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAV 361
+ A E KKR LRY+ H NG L+F S + + + ++ + F S+L + V
Sbjct: 221 IFANQYESVKKRQLCLALRYICHQNGCDLVFASVKEKLPSQLFKAMITRHVFDSNLQAKV 280
Query: 362 NFDYNKPIFVPFGTDSVASI---EGTTQYVTADICHLWE 397
D+N+ + + G+D+ +SI EG LW+
Sbjct: 281 EKDHNQALNIYAGSDNFSSIGEPEGAGMRGKVSFEKLWQ 319
>gi|395829573|ref|XP_003804136.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic dynein 2 light
intermediate chain 1 [Otolemur garnettii]
Length = 200
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWE 89
++ E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WE
Sbjct: 27 VEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWE 86
Query: 90 LGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 141
LG GTS L++ S+ + A F++VL+LDLS+ N LW E L R+
Sbjct: 87 LGGGTSLLDLISI--PITSDALRTFSIVLVLDLSKPNDLWPTMENLLQATRS 136
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ + A F++VL+LDLS+ N LW E L R+
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITSDALRTFSIVLVLDLSKPNDLWPTMENLLQATRS 136
>gi|29824427|ref|NP_056337.1| cytoplasmic dynein 2 light intermediate chain 1 isoform 2 [Homo
sapiens]
gi|16740931|gb|AAH16324.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens]
gi|119620695|gb|EAX00290.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_b
[Homo sapiens]
Length = 201
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 16/137 (11%)
Query: 19 PSPSSSEVHKIDIQSQ-------------ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPT 65
PS + E+ K +++ + E+ + IG+K+ GK+T++ R L++++ PKPT
Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPT 61
Query: 66 LALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSR 124
LALEY Y R++ G KDI H WELG GTS L++ S+ + F+LVL+LDLS+
Sbjct: 62 LALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISI--PITGDTLRTFSLVLVLDLSK 119
Query: 125 LNSLWTEAETFLAKFRA 141
N LW E L ++
Sbjct: 120 PNDLWPTMENLLQATKS 136
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ + F+LVL+LDLS+ N LW E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKS 136
>gi|444705918|gb|ELW47296.1| Pleckstrin homology domain-containing family H member 2 [Tupaia
chinensis]
Length = 1591
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 45/213 (21%)
Query: 63 KPTLALEYIYARKSGKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLD 121
KPT L + A K KDI H WELG GTS L++ S+ +S +L F++VL+LD
Sbjct: 1269 KPTEKLLFAMA----KPKPKDIAHFWELGGGTSLLDLISIPITSNTLRT---FSIVLVLD 1321
Query: 122 LSRLNSLWTEAETFLAKFRAIFE---------SNESVREKRGSFEHFRTADEHRDKGLIR 172
LS+ N LW E L + + ++++ E R D H D+ LI
Sbjct: 1322 LSKPNDLWPTMENLLQATKGHIDKVMMKLGKTNSKAASEMRQKIWSNMQKD-HPDRELID 1380
Query: 173 TFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDIL 232
FP+PL++IG KYD+F+ +S L+ + R ++
Sbjct: 1381 PFPIPLVIIGSKYDVFQ---------------------------FTSKSEALLLKIRGVI 1413
Query: 233 NHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
N AF + ++ D NKP+F+ G DS++ I
Sbjct: 1414 NQLAFGIDKSKSICVDQNKPLFITAGLDSLSQI 1446
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 49/224 (21%)
Query: 391 DICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L +
Sbjct: 1285 DIAHFWELGGGTSLLDLISIPITSNTLRT---FSIVLVLDLSKPNDLWPTMENLLQATKG 1341
Query: 450 IFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVPL 509
+ V K G + + A E R K I + D D+ LI FP+PL
Sbjct: 1342 HIDK---VMMKLGKT-NSKAASEMRQK----------IWSNMQKD-HPDRELIDPFPIPL 1386
Query: 510 ILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS 569
++IG KYD+F+ +S L+ + R ++N AF
Sbjct: 1387 VIIGSKYDVFQ---------------------------FTSKSEALLLKIRGVINQLAFG 1419
Query: 570 SHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+ ++ D NKP+F+ G DS++ I D ++G+ H
Sbjct: 1420 IDKSKSICVDQNKPLFITAGLDSLSQIGSPP---VPDNDIGKLH 1460
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 40/183 (21%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F+ +S L+
Sbjct: 1375 DRELIDPFPIPLVIIGSKYDVFQ---------------------------FTSKSEALLL 1407
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
+ R ++N AF + ++ D NKP+F+ G DS++ I + S ++
Sbjct: 1408 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHAHSPMEL 1467
Query: 827 YKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKD 884
+K ++ F P +N + K DPA D Y+E +D +R QK + ++ ++ D+KD
Sbjct: 1468 WKKVYEKLF----PPKNINMLKDIKDPARDPQYAESEVDEMRIQKDQNINMLK---DIKD 1520
Query: 885 KYR 887
R
Sbjct: 1521 PAR 1523
>gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC
[Chlamydomonas reinhardtii]
gi|75140920|sp|Q7XA07.1|DC2L1_CHLRE RecName: Full=Cytoplasmic dynein 2 light intermediate chain 1;
AltName: Full=Dynein 1b light intermediate chain
gi|31376209|gb|AAO12154.1| dynein light intermediate chain [Chlamydomonas reinhardtii]
gi|33334344|gb|AAQ12259.1| dynein light intermediate chain [Chlamydomonas reinhardtii]
gi|47680185|gb|AAT37069.1| dynein 1b light intermediate chain [Chlamydomonas reinhardtii]
gi|158276532|gb|EDP02304.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC
[Chlamydomonas reinhardtii]
Length = 427
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 124/272 (45%), Gaps = 44/272 (16%)
Query: 40 LIGTKSVGKSTLVFRFL--EKNDTPKPTLALEYIYARKSGK--TVMKDICHLWELGSGTS 95
+G+++ GKSTL+ RFL + + PKP+ +EY YARK KD+ H+WE+G
Sbjct: 45 FVGSRAAGKSTLLNRFLYPTRAEVPKPSEGIEYTYARKPAAFDHEKKDLAHIWEVGGSQE 104
Query: 96 RLEVASLFSSFSLTAQSGFTLVLML--DLSR----LNSLWTEAETFLAKFRAIFES---- 145
E LTA+ T V+++ DLS L +L E K + +E
Sbjct: 105 FAEEIVNSDQLFLTAKQVTTAVVVIVVDLSDPAGVLPTLLYWVEQVKKKLGSTYEKFEKK 164
Query: 146 ----NESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQ 201
E +R++ S +A+E DK + + L++ KYD F+N +P K++ +
Sbjct: 165 GLQLPEQLRQRAKS--KLYSANE--DKDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSR 220
Query: 202 CLRYLAHVNGASLLFHSSL----------DPGLVKRTRDILNHYAFSSHLASAV-----N 246
LRY+AH +GA L + S L D L+ ++NH F+ V
Sbjct: 221 VLRYIAHAHGAFLCYLSGLHGASEGSGAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQ 280
Query: 247 FDYNKPIFVPFGTDSVASI-------EGTTHG 271
D+ PI VP G D+ S+ EGT G
Sbjct: 281 IDHTGPIMVPAGFDTFKSVGRPRSQGEGTVAG 312
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 706 YDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSL- 764
Y EDK + + L++ KYD F+N +P K++ + LRY+AH +GA L + S L
Sbjct: 181 YSANEDKDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLH 240
Query: 765 ---------DPGLVKRTRDILNHYAFSSHLASAV-----NFDYNKPIFVPFGTDSVASIE 810
D L+ ++NH F+ V D+ PI VP G D+ S+
Sbjct: 241 GASEGSGAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSVG 300
Query: 811 GTTQYVTAGSTSSLDKYKHIFTTHF--LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQ 868
L +++ +F F +++ ++ +K A + + Y E +D++R +
Sbjct: 301 RPRSQGEGTVAGGLAEWRELFEKMFPGVREKEAKMSAKGA-KFVIPEQYKEEEVDAVRQR 359
Query: 869 KLEQLDQMR 877
K+ L+ R
Sbjct: 360 KVTDLENFR 368
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 493 YDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSL- 551
Y EDK + + L++ KYD F+N +P K++ + LRY+AH +GA L + S L
Sbjct: 181 YSANEDKDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLH 240
Query: 552 ---------DPGLVKRTRDILNHYAFSSHLASAV-----NFDYNKPIFVPFGTDSVASI 596
D L+ ++NH F+ V D+ PI VP G D+ S+
Sbjct: 241 GASEGSGAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSV 299
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSL----------DPGLVKRTRDILNHYAFS 354
+N +P K++ + LRY+AH +GA L + S L D L+ ++NH F+
Sbjct: 208 KNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHGASEGSGAEDAALLDNFTRLMNHLIFT 267
Query: 355 SHLASAV-----NFDYNKPIFVPFGTDSVASI-------EGTTQYVTADICHLWE 397
V D+ PI VP G D+ S+ EGT A+ L+E
Sbjct: 268 GLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSVGRPRSQGEGTVAGGLAEWRELFE 322
>gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens]
gi|312151214|gb|ADQ32119.1| dynein, cytoplasmic 2, light intermediate chain 1 [synthetic
construct]
Length = 201
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 16/137 (11%)
Query: 19 PSPSSSEVHKIDIQSQ-------------ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPT 65
PS + E+ K +++ + E+ + IG+K+ GK+T++ R L++++ KPT
Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPSKPT 61
Query: 66 LALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSR 124
LALEY Y R++ G KDI H WELG GTS L++ S+ + F+LVL+LDLS+
Sbjct: 62 LALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISI--PITGDTLRTFSLVLVLDLSK 119
Query: 125 LNSLWTEAETFLAKFRA 141
N LW E L ++
Sbjct: 120 PNDLWPTMENLLQATKS 136
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA 449
DI H WELG GTS L++ S+ + F+LVL+LDLS+ N LW E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKS 136
>gi|302841224|ref|XP_002952157.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Volvox
carteri f. nagariensis]
gi|300262422|gb|EFJ46628.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Volvox
carteri f. nagariensis]
Length = 422
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 38/274 (13%)
Query: 40 LIGTKSVGKSTLVFRFL--EKNDTPKPTLALEYIYARKSGKT--VMKDICHLWELGSGTS 95
+G+++ GKSTL+ RFL + + PKP+ +EY YARK KD+ H+WE+G
Sbjct: 45 FVGSRASGKSTLLNRFLYPTRAEVPKPSEGIEYTYARKPAAYDHEKKDLAHIWEVGGSQE 104
Query: 96 RLEVASLFSSFSLTAQSGFTLVLML--DLSR----LNSLWTEAETFLAKFRAIFES---- 145
E + LTA+ T V+++ DLS L +L E K A +E
Sbjct: 105 FAEEIANSDQLFLTAKQVTTAVVVIVVDLSDPAGILPTLLYWTEQVKKKLTATYEKFEKK 164
Query: 146 ----NESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQ 201
E +R++ S + + DK + + L++ KYD+F+ +P K++ +
Sbjct: 165 GLQLPEQLRQRAKS----KLYASNEDKDAVYHSGISLVIAATKYDVFKTSDPEVKKVMSR 220
Query: 202 CLRYLAHVNGASLLF-----------HSSLDPGLVKRTRDILNHYAFSSHLASAV----- 245
LRY+AH +GA L + ++ D L+ ++NH F+ V
Sbjct: 221 VLRYIAHAHGAFLCYLSGLHGGGGDGSAAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQP 280
Query: 246 NFDYNKPIFVPFGTDSVASIEGTTHGKDASLESG 279
D+N PI +P G D+ SI + S+ +G
Sbjct: 281 MSDHNGPIMMPAGADTFKSIGRPRGAAEGSVTAG 314
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 31/193 (16%)
Query: 706 YDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLF----- 760
Y EDK + + L++ KYD+F+ +P K++ + LRY+AH +GA L +
Sbjct: 181 YASNEDKDAVYHSGISLVIAATKYDVFKTSDPEVKKVMSRVLRYIAHAHGAFLCYLSGLH 240
Query: 761 ------HSSLDPGLVKRTRDILNHYAFSSHLASAV-----NFDYNKPIFVPFGTDSVASI 809
++ D L+ ++NH F+ V D+N PI +P G D+ SI
Sbjct: 241 GGGGDGSAAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPMSDHNGPIMMPAGADTFKSI 300
Query: 810 EGTTQYVTAGS-TSSLDKYKHIFTTHF--LQDDPSQNKSKSAPDPALDQNYSEPVIDSLR 866
G + GS T+ L +++ +F F +++ ++ +K A +D++R
Sbjct: 301 -GRPRGAAEGSVTAGLAEWRELFEKMFPGVREKEAKMSAKGA-----------KFVDAVR 348
Query: 867 NQKLEQLDQMRRE 879
++KL +LD R+E
Sbjct: 349 HRKLTELDNFRKE 361
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 41/228 (17%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLML--DLSR----LNSLWTEAETFL 444
D+ H+WE+G E + LTA+ T V+++ DLS L +L E
Sbjct: 92 DLAHIWEVGGSQEFAEEIANSDQLFLTAKQVTTAVVVIVVDLSDPAGILPTLLYWTEQVK 151
Query: 445 AKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRT 504
K A +E E K+G + ++ R + + Y EDK +
Sbjct: 152 KKLTATYEKFE----KKG----LQLPEQLRQRAKSKL-----------YASNEDKDAVYH 192
Query: 505 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLF-----------HSSLDP 553
+ L++ KYD+F+ +P K++ + LRY+AH +GA L + ++ D
Sbjct: 193 SGISLVIAATKYDVFKTSDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHGGGGDGSAAEDA 252
Query: 554 GLVKRTRDILNHYAFSSHLASAV-----NFDYNKPIFVPFGTDSVASI 596
L+ ++NH F+ V D+N PI +P G D+ SI
Sbjct: 253 ALLDNFTRLMNHLIFTGLEKKPVLKMQPMSDHNGPIMMPAGADTFKSI 300
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 26/114 (22%)
Query: 308 EPNKKRIAVQCLRYLAHVNGASLLF-----------HSSLDPGLVKRTRDILNHYAFSSH 356
+P K++ + LRY+AH +GA L + ++ D L+ ++NH F+
Sbjct: 211 DPEVKKVMSRVLRYIAHAHGAFLCYLSGLHGGGGDGSAAEDAALLDNFTRLMNHLIFTGL 270
Query: 357 LASAV-----NFDYNKPIFVPFGTDSVASI-------EGTTQYVTADICHLWEL 398
V D+N PI +P G D+ SI EG+ VTA + EL
Sbjct: 271 EKKPVLKMQPMSDHNGPIMMPAGADTFKSIGRPRGAAEGS---VTAGLAEWREL 321
>gi|339260322|ref|XP_003368458.1| putative cytoplasmic dynein 2 light intermediate chain 1 (mD2LIC)
[Trichinella spiralis]
gi|316965297|gb|EFV50050.1| putative cytoplasmic dynein 2 light intermediate chain 1 (mD2LIC)
[Trichinella spiralis]
Length = 286
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 33/192 (17%)
Query: 82 KDICHLWELGSGTSRLEVASLFSSFSL-TAQSGFTLVLMLDLSRLNSLWTEAETFLAKFR 140
K I H++++ G L+ +LF S L + +++M++L+ + +WT E FL+ R
Sbjct: 51 KKIGHIYQIEDG---LDFINLFKSIRLDNMMNNAAVIVMVNLAEPSEIWTTLEQFLSLTR 107
Query: 141 -----AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNK 195
+ + N++V+E LIR P Y+ N+EP K
Sbjct: 108 DYLLKLLMKQNDNVQE-----------------MLIRKAAKP-------YESHPNIEPEK 143
Query: 196 KRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFV 255
K+I + LR +AH+NGA+L F S L+ R R + +H+ F + L+ +++ D+NKP++V
Sbjct: 144 KKIICRSLRLIAHLNGATLQFLSFKMDNLIVRGRAVFSHFLFKTSLSKSISTDFNKPVYV 203
Query: 256 PFGTDSVASIEG 267
G DS++ I+
Sbjct: 204 NPGADSISVIDS 215
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 16/153 (10%)
Query: 729 YDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASA 788
Y+ N+EP KK+I + LR +AH+NGA+L F S L+ R R + +H+ F + L+ +
Sbjct: 133 YESHPNIEPEKKKIICRSLRLIAHLNGATLQFLSFKMDNLIVRGRAVFSHFLFKTSLSKS 192
Query: 789 VNFDYNKPIFVPFGTDSVASIEG------TTQYVTAGSTSSLDKYKHIFTTHFLQDDPSQ 842
++ D+NKP++V G DS++ I+ +T Y T T Y FT+ F + +
Sbjct: 193 ISTDFNKPVYVNPGADSISVIDSNIVRSESTTYETVMKT-----YGSEFTSIF---NKKE 244
Query: 843 NKSKSAPDP-ALDQNYSEPVIDSLRNQKLEQLD 874
N +K A ++ + E IDSL+ ++ +Q+D
Sbjct: 245 NTNKIDEQLFAANEQFKEEAIDSLKFER-DQVD 276
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 46/214 (21%)
Query: 386 QYVTADICHLWELGSGTSRLEVASLFSSFSL-TAQSGFTLVLMLDLSRLNSLWTEAETFL 444
Q I H++++ G L+ +LF S L + +++M++L+ + +WT E FL
Sbjct: 47 QCFEKKIGHIYQIEDG---LDFINLFKSIRLDNMMNNAAVIVMVNLAEPSEIWTTLEQFL 103
Query: 445 AKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRT 504
+ L R + + L++ K + + LIR
Sbjct: 104 S--------------------------------LTRDYLLKLLM---KQNDNVQEMLIRK 128
Query: 505 FPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILN 564
P Y+ N+EP KK+I + LR +AH+NGA+L F S L+ R R + +
Sbjct: 129 AAKP-------YESHPNIEPEKKKIICRSLRLIAHLNGATLQFLSFKMDNLIVRGRAVFS 181
Query: 565 HYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEG 598
H+ F + L+ +++ D+NKP++V G DS++ I+
Sbjct: 182 HFLFKTSLSKSISTDFNKPVYVNPGADSISVIDS 215
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%)
Query: 306 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDY 365
N+EP KK+I + LR +AH+NGA+L F S L+ R R + +H+ F + L+ +++ D+
Sbjct: 138 NIEPEKKKIICRSLRLIAHLNGATLQFLSFKMDNLIVRGRAVFSHFLFKTSLSKSISTDF 197
Query: 366 NKPIFVPFGTDSVASIEG 383
NKP++V G DS++ I+
Sbjct: 198 NKPVYVNPGADSISVIDS 215
>gi|355685136|gb|AER97635.1| dynein 2 light intermediate chain isoform 2 [Mustela putorius furo]
Length = 107
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 12 ELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYI 71
E+A + SS ++ E+++ IG+K+ GK+T++ R L++++ PKPTLALEY
Sbjct: 8 EIAKAEVEKHGSSGGEGDGLEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYT 67
Query: 72 YARKS-GKTVMKDICHLWELGSGTSRLEVASL 102
Y R++ G + KDI H WELG GTS L++ S+
Sbjct: 68 YGRRAKGHNIPKDIAHFWELGGGTSLLDLISI 99
>gi|195156319|ref|XP_002019048.1| GL26152 [Drosophila persimilis]
gi|194115201|gb|EDW37244.1| GL26152 [Drosophila persimilis]
Length = 154
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 735 LEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS--SHLASAVNFD 792
L+P+ K+ +CLR +AH G +LLF+S P L K RD ++H F SH + D
Sbjct: 3 LDPSLKKAICRCLRSMAHHIGGALLFYSQKIPKLSKVLRDTISHMGFGSPSHPFRSHVTD 62
Query: 793 YNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQDDPSQNKSKSAPDPA 852
+N+P+ V FGTDS + I T S+++ F Q + + DPA
Sbjct: 63 HNEPLSVWFGTDSWSRIGDT-------GAQSVERIGATFGVAVPQLQLEKQLQQVPQDPA 115
Query: 853 LDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRT 888
D + E +ID +R QK E+L + R+V ++ K+ +
Sbjct: 116 KDPGFKESLIDEMRAQKNEELATIMRDVLLRGKFES 151
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 191 LEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS--SHLASAVNFD 248
L+P+ K+ +CLR +AH G +LLF+S P L K RD ++H F SH + D
Sbjct: 3 LDPSLKKAICRCLRSMAHHIGGALLFYSQKIPKLSKVLRDTISHMGFGSPSHPFRSHVTD 62
Query: 249 YNKPIFVPFGTDSVASIEGT 268
+N+P+ V FGTDS + I T
Sbjct: 63 HNEPLSVWFGTDSWSRIGDT 82
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 307 LEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS--SHLASAVNFD 364
L+P+ K+ +CLR +AH G +LLF+S P L K RD ++H F SH + D
Sbjct: 3 LDPSLKKAICRCLRSMAHHIGGALLFYSQKIPKLSKVLRDTISHMGFGSPSHPFRSHVTD 62
Query: 365 YNKPIFVPFGTDSVASIEGT 384
+N+P+ V FGTDS + I T
Sbjct: 63 HNEPLSVWFGTDSWSRIGDT 82
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 522 LEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFS--SHLASAVNFD 579
L+P+ K+ +CLR +AH G +LLF+S P L K RD ++H F SH + D
Sbjct: 3 LDPSLKKAICRCLRSMAHHIGGALLFYSQKIPKLSKVLRDTISHMGFGSPSHPFRSHVTD 62
Query: 580 YNKPIFVPFGTDSVASIEGT 599
+N+P+ V FGTDS + I T
Sbjct: 63 HNEPLSVWFGTDSWSRIGDT 82
>gi|123423641|ref|XP_001306418.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121887991|gb|EAX93488.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 286
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 38/227 (16%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYA--RKSGKTVMKDICHLWELGSGTS 95
+L +G + GKS+L+ +F + D+ PTLAL Y + +GK + + H WELG G
Sbjct: 32 VLFVGGEQSGKSSLINQFFGRGDSTYPTLALAYQCCNLKVNGK---EKVLHFWELGGG-- 86
Query: 96 RLEVASLFSSFSLTAQ-SGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRG 154
+++ SL + + SGF + + DLS K +I ES E +
Sbjct: 87 -VQMESLIPTIATEDTISGFVVFVCFDLS--------------KSASIIESLEWL----- 126
Query: 155 SFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASL 214
R D+ + L G YDLFE+ P K I VQ LR +A + L
Sbjct: 127 DILQMRLKDKQN----------AIFLAGTHYDLFESKSPQDKEIIVQGLRSIAAEHKVGL 176
Query: 215 LFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDS 261
+F SS L+ R ++++ + ++ + D+ P+ V G D+
Sbjct: 177 VFTSSKMETLINRFKNVIKYVCIANSNVREKSVDFFNPVIVGPGADT 223
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 722 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 781
+ L G YDLFE+ P K I VQ LR +A + L+F SS L+ R ++++ +
Sbjct: 140 IFLAGTHYDLFESKSPQDKEIIVQGLRSIAAEHKVGLVFTSSKMETLINRFKNVIKYVCI 199
Query: 782 SSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQDDPS 841
++ + D+ P+ V G D T+ T+G + K + D S
Sbjct: 200 ANSNVREKSVDFFNPVIVGPGAD--------TELQTSGQEVADMMNKLSAEIAIEKRDKS 251
Query: 842 QNKSKSA-PDPALDQNYSEPVIDSLRNQKLEQLDQMR 877
N K+ DP L +E IDSL K +L+ +
Sbjct: 252 SNSLKNVITDPGL----AEEDIDSLYLAKKAELNSKK 284
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
+ L G YDLFE+ P K I VQ LR +A + L+F SS L+ R ++++ +
Sbjct: 140 IFLAGTHYDLFESKSPQDKEIIVQGLRSIAAEHKVGLVFTSSKMETLINRFKNVIKYVCI 199
Query: 569 SSHLASAVNFDYNKPIFVPFGTDS 592
++ + D+ P+ V G D+
Sbjct: 200 ANSNVREKSVDFFNPVIVGPGADT 223
>gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens]
Length = 144
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+ + IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASL 102
TS L++ S+
Sbjct: 91 TSLLDLISI 99
>gi|170577125|ref|XP_001893888.1| hypothetical protein Bm1_12090 [Brugia malayi]
gi|158599820|gb|EDP37275.1| hypothetical protein Bm1_12090 [Brugia malayi]
Length = 116
Score = 73.9 bits (180), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 30 DIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWE 89
D+Q+ + L++ G+++ GK++++FRFL +N+ KPT+ALEY Y R++ + MKD+ ++WE
Sbjct: 37 DLQTSDTRLIICGSRNCGKTSMIFRFLNRNEDTKPTIALEYTYGRRN-RGKMKDVGNIWE 95
Query: 90 LGSGTS 95
LG GT+
Sbjct: 96 LGGGTN 101
>gi|255089118|ref|XP_002506481.1| cytoplasmic dynein 2 light intermediate chain 1 [Micromonas sp.
RCC299]
gi|226521753|gb|ACO67739.1| cytoplasmic dynein 2 light intermediate chain 1 [Micromonas sp.
RCC299]
Length = 417
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 134/337 (39%), Gaps = 81/337 (24%)
Query: 38 LLLIGTKSVGKSTLVFRFL--EKNDTPKPTLALEYIYARKSGKTVM--------KDICHL 87
L ++G++ GK+TLV R L +K + PKPT +EY YAR++ KD+ H+
Sbjct: 59 LFVVGSRGCGKTTLVNRLLYPDKTEVPKPTEGMEYNYARRASSGAGGGGGGVDRKDVAHV 118
Query: 88 WELGSGTSRLEVASLFSSFSLTAQSGFTLV--LMLDLSRLNSLWTEAETFLAKFRAIFES 145
WE+ + + + L + T V + +DL++ + AE +L + A
Sbjct: 119 WEIAGSRHFADEVTEQDNVFLGPRHVTTAVVAICVDLAKPHEAMRTAEYWLGRVHARCAK 178
Query: 146 NESVREKRGSF--EHFRTADE----------------HRD--KGLIRTFPVPLILIGGKY 185
RGS E E H D L+R V ++++ K+
Sbjct: 179 TFEKLAARGSRLPEQLVRRSERVFAAGGGGGGAAGGAHEDAHSPLVRHSGVTVLIVATKH 238
Query: 186 DLFENLEPNKKRIAVQCLRYLAHVNGASLLF--------------HSSLD--------PG 223
D + +P + ++ V+ LR+LAH N A L F SSL+ PG
Sbjct: 239 DAWRRTDPERMKVLVRALRFLAHANAAGLFFLGGFGAADGDSRADRSSLNDADDADEYPG 298
Query: 224 LVKRT----RDILNHYAFSSHLAS-----AVNFDYNKPIFVPFGTDSVASIEGTTHGKDA 274
++ R LNH F+ A D+ +P+ P G D ++SI G
Sbjct: 299 EMRSQFNQFRAYLNHLMFAGADRKFPGRIAARLDHLRPVTCPVGGDRLSSI-----GVPK 353
Query: 275 SLESGGRGFNRSRGMKFEKKRGWIEGTVTARNLEPNK 311
E GG E R W + VT+R P +
Sbjct: 354 GAEGGG-----------EPLRAWRD--VTSRMFPPPR 377
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 31/127 (24%)
Query: 501 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLF------------- 547
L+R V ++++ K+D + +P + ++ V+ LR+LAH N A L F
Sbjct: 223 LVRHSGVTVLIVATKHDAWRRTDPERMKVLVRALRFLAHANAAGLFFLGGFGAADGDSRA 282
Query: 548 -HSSLD--------PGLVKRT----RDILNHYAFSSHLAS-----AVNFDYNKPIFVPFG 589
SSL+ PG ++ R LNH F+ A D+ +P+ P G
Sbjct: 283 DRSSLNDADDADEYPGEMRSQFNQFRAYLNHLMFAGADRKFPGRIAARLDHLRPVTCPVG 342
Query: 590 TDSVASI 596
D ++SI
Sbjct: 343 GDRLSSI 349
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 31/127 (24%)
Query: 714 LIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLF------------- 760
L+R V ++++ K+D + +P + ++ V+ LR+LAH N A L F
Sbjct: 223 LVRHSGVTVLIVATKHDAWRRTDPERMKVLVRALRFLAHANAAGLFFLGGFGAADGDSRA 282
Query: 761 -HSSLD--------PGLVKRT----RDILNHYAFSSHLAS-----AVNFDYNKPIFVPFG 802
SSL+ PG ++ R LNH F+ A D+ +P+ P G
Sbjct: 283 DRSSLNDADDADEYPGEMRSQFNQFRAYLNHLMFAGADRKFPGRIAARLDHLRPVTCPVG 342
Query: 803 TDSVASI 809
D ++SI
Sbjct: 343 GDRLSSI 349
>gi|407411227|gb|EKF33382.1| dynein light intermediate chain, putative [Trypanosoma cruzi
marinkellei]
Length = 422
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 40/278 (14%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTP-----------KPTLALEYIYARKSGKT 79
+ E +L++GT GK++L+ R +T KPT AL+Y + R++ +
Sbjct: 74 VTQTEVNVLIVGTSGGGKTSLLRRLFAGVNTSNSSVPKSFLRVKPTTALDYSFVRRNDRH 133
Query: 80 VMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAETFLA 137
+ + + H WEL G E+ + +T ++ T+VL ++D S +++W ++
Sbjct: 134 IAQ-VAHFWELAQGMELSELCEVV----ITPENVHTMVLAVVVDCSEPSTMWDTVVYWMK 188
Query: 138 KF-RAIFESNESVREKRG-------SFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 189
+ R + E + +R K S EH D +R +P ++I K D F
Sbjct: 189 RVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVGLEHPDLNRLRLSGIPTLIICNKLDAFA 248
Query: 190 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS-----HLA-- 242
E + V+ +R++AH+ GA L+F S + + R ++NH F S H+
Sbjct: 249 G-EMTMLKTLVRSMRFVAHIYGAYLIFTSDAE---ATKLRAVMNHLVFVSTFDLRHIELD 304
Query: 243 ---SAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASLE 277
AV + F G +V+ + G DA L+
Sbjct: 305 PERGAVLVIPSADTFADIGDPAVSDMGGLQSTGDAELD 342
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D +R +P ++I K D F E + V+ +R++AH+ GA L+F S +
Sbjct: 226 DLNRLRLSGIPTLIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLIFTSDAE---AT 281
Query: 771 RTRDILNHYAFSS-----HLA-----SAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGS 820
+ R ++NH F S H+ AV + F G +V+ + G + +
Sbjct: 282 KLRAVMNHLVFVSTFDLRHIELDPERGAVLVIPSADTFADIGDPAVSDMGG----LQSTG 337
Query: 821 TSSLDKYKHIFTTHFLQDDPSQNKSKSAPDPAL-------DQNYSEPVIDSLRNQKLEQL 873
+ LD++K F Q++ + D L + + EP +D++R QK ++L
Sbjct: 338 DAELDRWKAPLDAMF---PAKQSEGRMQNDSFLKRLYDTGENGFGEPTVDAVRKQKEDEL 394
Query: 874 DQMRREVDMKDK 885
+Q R+ ++K
Sbjct: 395 EQYRKSAFKREK 406
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 390 ADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAETFLAKF 447
A + H WEL G E+ + +T ++ T+VL ++D S +++W ++ +
Sbjct: 135 AQVAHFWELAQGMELSELCEVV----ITPENVHTMVLAVVVDCSEPSTMWDTVVYWMKRV 190
Query: 448 -RAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
R + E + +R K + DK L R L+G ++ D +R
Sbjct: 191 DRRVIEIFQKMRAKGSATP---------DKLLSRAKR----LVGLEH---PDLNRLRLSG 234
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
+P ++I K D F E + V+ +R++AH+ GA L+F S + + R ++NH
Sbjct: 235 IPTLIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLIFTSDAE---ATKLRAVMNHL 290
Query: 567 AFSS 570
F S
Sbjct: 291 VFVS 294
>gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL
Brener]
gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi]
Length = 422
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 40/278 (14%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTP-----------KPTLALEYIYARKSGKT 79
+ E +L++GT GK++L+ R +T KPT AL+Y + R++ +
Sbjct: 74 VTQTEVNVLIVGTSGGGKTSLLRRIFSGVNTSSSSVPKSFLRVKPTTALDYSFVRRNDRH 133
Query: 80 VMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAETFLA 137
+ + + H WEL G +E++ L +T ++ T+VL ++D S +++W ++
Sbjct: 134 IAQ-VAHFWELAQG---MELSQL-CEVVITPENVHTMVLAIVVDCSEPSTMWDTVVYWMK 188
Query: 138 KF-RAIFESNESVREKRG-------SFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 189
+ R + E + +R K S EH D +R VP ++I K D F
Sbjct: 189 RVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVGMEHPDLNRLRLSGVPTMIICNKLDAFA 248
Query: 190 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS-----HLA-- 242
E + V+ +R++AH+ GA L+F S + + R ++NH F S H+
Sbjct: 249 G-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAE---AIKLRAVMNHLVFVSTFDLKHIELD 304
Query: 243 ---SAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASLE 277
AV + F G +V+ + G DA L+
Sbjct: 305 PERGAVLVIPSADTFADIGEPAVSDMGGLQSTGDAELD 342
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D +R VP ++I K D F E + V+ +R++AH+ GA L+F S +
Sbjct: 226 DLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAE---AI 281
Query: 771 RTRDILNHYAFSS-----HLA-----SAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGS 820
+ R ++NH F S H+ AV + F G +V+ + G + +
Sbjct: 282 KLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGG----LQSTG 337
Query: 821 TSSLDKYKHIFTTHFLQDDPSQNKSKSAPDPAL-------DQNYSEPVIDSLRNQKLEQL 873
+ LD++K F Q++ + D L + + EP +D++R QK ++L
Sbjct: 338 DAELDRWKAPLDAMF---PAKQSEGRMQNDSFLKRLYDTGENGFGEPTVDAVRKQKEDEL 394
Query: 874 DQMRREVDMKDK 885
+Q R+ ++K
Sbjct: 395 EQYRKSAFKREK 406
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 27/184 (14%)
Query: 390 ADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAETFLAKF 447
A + H WEL G +E++ L +T ++ T+VL ++D S +++W ++ +
Sbjct: 135 AQVAHFWELAQG---MELSQL-CEVVITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRV 190
Query: 448 -RAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
R + E + +R K + DK L R L+G ++ D +R
Sbjct: 191 DRRVIEIFQKMRAKGSATP---------DKLLSRAKR----LVGMEH---PDLNRLRLSG 234
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
VP ++I K D F E + V+ +R++AH+ GA L+F S + + R ++NH
Sbjct: 235 VPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAE---AIKLRAVMNHL 290
Query: 567 AFSS 570
F S
Sbjct: 291 VFVS 294
>gi|340059901|emb|CCC54298.1| putative dynein light intermediate chain [Trypanosoma vivax Y486]
Length = 410
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 30/247 (12%)
Query: 30 DIQSQERTLLLIGTKSVGKSTLVFRFLE---------KNDTP-KPTLALEYIYARKSGKT 79
++ E + ++G S GKS+++ R K T KPT AL+Y Y + +
Sbjct: 74 NVSQAEVNMFVVGAPSSGKSSVINRICSSIGGSGATSKGKTKLKPTTALDYTYTTRVNRH 133
Query: 80 VMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLML--DLSRLNSLWTEAETFLA 137
V + + H WEL G +E++ L L ++ T+ +M+ DL +++W +L
Sbjct: 134 VSQ-VVHFWELAQG---MELSQL-CEVVLIPENVHTMFVMIVVDLGDPSTIWETLAYWLK 188
Query: 138 KF-RAIFESNESVR-------EKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 189
+ R + E + +R +K + + H D IR +P +++ K D F
Sbjct: 189 RTDRRVNEIAQKMRAKGSTTPDKLQARARLALGEGHPDVNRIRFSGLPTVIVCNKLDAFA 248
Query: 190 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL-ASAVNFD 248
+ ++ + +CLR++AH+ GA L+F S + G + R +LNH F + A + FD
Sbjct: 249 G-DTSQLKTLTRCLRFIAHLYGAYLVFTSEAESG---KLRLLLNHMLFLTPFDAKQIEFD 304
Query: 249 YNKPIFV 255
++ + +
Sbjct: 305 ADRGVVL 311
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 27/192 (14%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D IR +P +++ K D F + ++ + +CLR++AH+ GA L+F S + G
Sbjct: 226 DVNRIRFSGLPTVIVCNKLDAFAG-DTSQLKTLTRCLRFIAHLYGAYLVFTSEAESG--- 281
Query: 771 RTRDILNHYAFSSHL-ASAVNFDYNKPI---------FVPFGTDSVASIEGTTQYVTAGS 820
+ R +LNH F + A + FD ++ + FV G V + +T + G
Sbjct: 282 KLRLLLNHMLFLTPFDAKQIEFDADRGVVLVTPESDTFVDIGDPPVCDM--STASRSTGD 339
Query: 821 TSSLDKYKHIFTTHFLQDDPSQNKSKSAPDPAL-------DQNYSEPVIDSLRNQKLEQL 873
S LD++K F P ++ + DP L D + EP+ID++R QK E+L
Sbjct: 340 -SELDRWKVPLDAMF---PPKNSEDQLQNDPLLKRLYDMGDGGFGEPLIDTVRKQKDEEL 395
Query: 874 DQMRREVDMKDK 885
+Q R+ +DK
Sbjct: 396 EQYRKGAAKRDK 407
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 38/235 (16%)
Query: 390 ADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLML--DLSRLNSLWTEAETFLAKF 447
+ + H WEL G +E++ L L ++ T+ +M+ DL +++W +L +
Sbjct: 135 SQVVHFWELAQG---MELSQL-CEVVLIPENVHTMFVMIVVDLGDPSTIWETLAYWLKRT 190
Query: 448 -RAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
R + E + +R K + T D+ + + L L G D+ IR
Sbjct: 191 DRRVNEIAQKMRAKGST-----TPDKLQARAR-------LALGEGHPDV----NRIRFSG 234
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
+P +++ K D F + ++ + +CLR++AH+ GA L+F S + G + R +LNH
Sbjct: 235 LPTVIVCNKLDAFAG-DTSQLKTLTRCLRFIAHLYGAYLVFTSEAESG---KLRLLLNHM 290
Query: 567 AFSSHL-ASAVNFDYNKPI---------FVPFGTDSVASIEGTTQYVTADTEVGR 611
F + A + FD ++ + FV G V + T T D+E+ R
Sbjct: 291 LFLTPFDAKQIEFDADRGVVLVTPESDTFVDIGDPPVCDM-STASRSTGDSELDR 344
>gi|407848181|gb|EKG03639.1| dynein light intermediate chain, putative [Trypanosoma cruzi]
Length = 422
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 40/278 (14%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTP-----------KPTLALEYIYARKSGKT 79
+ E +L++GT GK++L+ R +T KPT AL+Y + R++ +
Sbjct: 74 VTQTEVNVLIVGTSGGGKTSLLRRIFSGVNTSSSSVPKSFLRVKPTTALDYSFVRRNDRH 133
Query: 80 VMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAETFLA 137
+ + + H WEL G +E++ L +T ++ T VL ++D S +++W ++
Sbjct: 134 IAQ-VAHFWELAQG---MELSQL-CEVVITPENVHTTVLAIVVDCSEPSTMWDTVVYWMK 188
Query: 138 KF-RAIFESNESVREKRG-------SFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 189
R + E + +R K S EH D +R VP ++I K D F
Sbjct: 189 CVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVGMEHPDLNRLRLSGVPTMIICNKLDAFA 248
Query: 190 NLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS-----HLA-- 242
E + V+ +R++AH+ GA L+F S + + R ++NH F S H+
Sbjct: 249 G-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAE---AIKLRAVMNHLVFVSTFDLKHIELD 304
Query: 243 ---SAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASLE 277
AV + F G +V+ + G DA L+
Sbjct: 305 PERGAVLVIPSADTFADIGEPAVSDMGGLQSTGDAELD 342
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D +R VP ++I K D F E + V+ +R++AH+ GA L+F S +
Sbjct: 226 DLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAE---AI 281
Query: 771 RTRDILNHYAFSS-----HLA-----SAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGS 820
+ R ++NH F S H+ AV + F G +V+ + G + +
Sbjct: 282 KLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGG----LQSTG 337
Query: 821 TSSLDKYKHIFTTHFLQDDPSQNKSKSAPDPAL-------DQNYSEPVIDSLRNQKLEQL 873
+ LD++K F Q++ + D L + + EP +D++R QK ++L
Sbjct: 338 DAELDRWKAPLDAMF---PAKQSEGRMQNDSFLKRLYDTSENGFGEPTVDAVRKQKEDEL 394
Query: 874 DQMRREVDMKDK 885
+Q R+ ++K
Sbjct: 395 EQYRKSAFKREK 406
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 390 ADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAETFLAKF 447
A + H WEL G +E++ L +T ++ T VL ++D S +++W ++
Sbjct: 135 AQVAHFWELAQG---MELSQL-CEVVITPENVHTTVLAIVVDCSEPSTMWDTVVYWMKCV 190
Query: 448 -RAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
R + E + +R K + DK L R L+G ++ D +R
Sbjct: 191 DRRVIEIFQKMRAKGSATP---------DKLLSRAKR----LVGMEH---PDLNRLRLSG 234
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHY 566
VP ++I K D F E + V+ +R++AH+ GA L+F S + + R ++NH
Sbjct: 235 VPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAE---AIKLRAVMNHL 290
Query: 567 AFSS 570
F S
Sbjct: 291 VFVS 294
>gi|145509070|ref|XP_001440479.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407696|emb|CAK73082.1| unnamed protein product [Paramecium tetraurelia]
Length = 319
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 127/267 (47%), Gaps = 34/267 (12%)
Query: 32 QSQ-ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTV-MKDICHLWE 89
QSQ + + +L G GKST+V + + + L IYA++ + + + +E
Sbjct: 17 QSQLQHSFVLCGQPQSGKSTIVSKLTSQQIQDQAGL----IYAQQKTNIIGYQAVLQYFE 72
Query: 90 LGSGTSRLEVASLFSSFSLTAQS--GFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNE 147
+ SG + ++ +L L QS ++ VL++DLS ++ A+ R I E E
Sbjct: 73 I-SGQAFKQLLTL----PLNKQSYQQYSYVLVIDLS--DNPHEILNVCNAEIRYIREETE 125
Query: 148 SVREKRGSFEHFRTAD--------EHRDKGLIRTFPVPLILIGGKYDLF-ENLEPNKKRI 198
++ + F+ + H DK I VP+I++G KYDLF +NL+ ++
Sbjct: 126 KKLQQSIDVDTFKQLELNIYDKIMMHHDKNRIVPLYVPIIIVGWKYDLFSKNLDLESRKW 185
Query: 199 AVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFG 258
+ LRYLAH N SL+F S+ D V++T L ++ + AS +D+ K I +
Sbjct: 186 ITRGLRYLAHTNNCSLVFGSNQDYQFVRQT---LQYHVKPT--ASIYQYDHLKQICITQL 240
Query: 259 TDSVASIEGTTHGKDASLESGGRGFNR 285
+DS+ +I G + GFN+
Sbjct: 241 SDSIENINLPPSGNNPL-----DGFNK 262
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 479 IRTFPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLF-ENLEPNKKRIAVQCLRYL 537
+ TF + I K + DK I VP+I++G KYDLF +NL+ ++ + LRYL
Sbjct: 134 VDTFKQLELNIYDKIMMHHDKNRIVPLYVPIIIVGWKYDLFSKNLDLESRKWITRGLRYL 193
Query: 538 AHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
AH N SL+F S+ D V++T L ++ + AS +D+ K I + +DS+ +I
Sbjct: 194 AHTNNCSLVFGSNQDYQFVRQT---LQYHVKPT--ASIYQYDHLKQICITQLSDSIENI 247
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 692 IRTFPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLF-ENLEPNKKRIAVQCLRYL 750
+ TF + I K + DK I VP+I++G KYDLF +NL+ ++ + LRYL
Sbjct: 134 VDTFKQLELNIYDKIMMHHDKNRIVPLYVPIIIVGWKYDLFSKNLDLESRKWITRGLRYL 193
Query: 751 AHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 809
AH N SL+F S+ D V++T L ++ + AS +D+ K I + +DS+ +I
Sbjct: 194 AHTNNCSLVFGSNQDYQFVRQT---LQYHVKPT--ASIYQYDHLKQICITQLSDSIENI 247
>gi|402578078|gb|EJW72033.1| hypothetical protein WUBG_17061 [Wuchereria bancrofti]
Length = 128
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
Query: 51 LVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTA 110
++ RFL +N+ KPT+ALEY Y R++ V KD+ H+WELG GT+ + + S +
Sbjct: 1 MILRFLNRNEDAKPTIALEYTYGRRNRGKV-KDVGHIWELGGGTNLYNLLQIPLSSNYIH 59
Query: 111 QSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIF--ESNESVREKRGSFEHFRTADE 164
Q +L++++DL+ +W T L R I E +SV++ S++ F T D+
Sbjct: 60 QC--SLIIVIDLTAPFDMWNTFYTLLDNARIIIDNEMQQSVKKSSDSYKVF-TVDK 112
>gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Trypanosoma cruzi strain CL
Brener]
gi|70865007|gb|EAN81375.1| dynein light intermediate chain, putative [Trypanosoma cruzi]
Length = 286
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 27/209 (12%)
Query: 31 IQSQERTLLLIGTKSVGKSTLVFRFLEKNDTP-----------KPTLALEYIYARKSGKT 79
+ E +L++GT GK++L+ R +T KPT AL+Y + R++ +
Sbjct: 74 VTQTEVNVLIVGTSGSGKTSLLRRIFSGVNTSSSSVPKSFLRVKPTTALDYSFVRRNDRH 133
Query: 80 VMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAETFLA 137
+ + + H WEL G +E++ L +T ++ T+VL ++D S +++W ++
Sbjct: 134 IAQ-VAHFWELAQG---MELSQL-CEVVITPENVHTMVLAIVVDCSEPSTMWDTVVYWMK 188
Query: 138 KF-RAIFESNESVREKRG-------SFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 189
+ R + E + +R K S EH D +R VP ++I K D F
Sbjct: 189 RVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVGMEHPDLNRLRLSGVPTMIICNKLDAFA 248
Query: 190 NLEPNKKRIAVQCLRYLAHVNGASLLFHS 218
E + V+ +R++AH+ GA L+F S
Sbjct: 249 G-EMTMLKTLVRSMRFVAHIYGAYLVFTS 276
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 390 ADICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVL--MLDLSRLNSLWTEAETFLAKF 447
A + H WEL G +E++ L +T ++ T+VL ++D S +++W ++ +
Sbjct: 135 AQVAHFWELAQG---MELSQL-CEVVITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRV 190
Query: 448 -RAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFP 506
R + E + +R K + DK L R L+G ++ D +R
Sbjct: 191 DRRVIEIFQKMRAKGSATP---------DKLLSRAKR----LVGMEH---PDLNRLRLSG 234
Query: 507 VPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHS 549
VP ++I K D F E + V+ +R++AH+ GA L+F S
Sbjct: 235 VPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTS 276
>gi|195156317|ref|XP_002019047.1| GL26151 [Drosophila persimilis]
gi|194115200|gb|EDW37243.1| GL26151 [Drosophila persimilis]
Length = 170
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQS--QERTLLLIGTKSVGKSTLVFRFLEKND-T 61
S++DIA LA + + +++ S +ERTLL++G+K VGKST + +F ++ + T
Sbjct: 31 SIQDIAGRLAEEQQ------RLRQLEATSMPKERTLLVLGSKCVGKSTAINKFFDREEHT 84
Query: 62 PKPTLALEYIYARKSGKTVMKDICHLWELGS---GTSRLEVASLFSSFSLTAQSGFTLVL 118
+PTLALEY + R+ G + ++WELGS LEV A + +
Sbjct: 85 TRPTLALEYSFGRRIGSGRSPQVMNVWELGSLDNADQLLEVPMRTHGLQQLA-----VFI 139
Query: 119 MLDLSRLNSLWTEAETFLAKFR 140
M+DLS+ WT+ E R
Sbjct: 140 MVDLSQPQRFWTDLECAYKGLR 161
>gi|123415018|ref|XP_001304608.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886072|gb|EAX91678.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 287
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 44/229 (19%)
Query: 33 SQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYA--RKSGKTVMKDICHLWEL 90
++E+ L +G++ GKS L +F + D P TLAL Y A R+ K V + H WE+
Sbjct: 26 NEEKHFLFVGSEKSGKSCLQNQFFSRRDEPPETLALSYQSASVRQDDKEV---VLHFWEI 82
Query: 91 GSGTSRLE-VASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTE---AETFLAKFRAIFESN 146
GSGT + + ++ + +L F + ++++ +S+ T AE ++KF +S
Sbjct: 83 GSGTKLDQLINTIVTKETL---KDFNAFICFNVNKPSSILTAIDWAENLISKFAYKSQS- 138
Query: 147 ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYL 206
+ IG YD FE+ +P++K VQ LR +
Sbjct: 139 -------------------------------IYFIGTFYDTFESNDPSQKINTVQGLRAI 167
Query: 207 AHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFV 255
A A L+F S D L R + ++ A + + P+F+
Sbjct: 168 ASKYHAGLIFTSYKDDNLANRFKGLIRQLALGETPTGEIITQHISPVFI 216
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 17/158 (10%)
Query: 722 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 781
+ IG YD FE+ +P++K VQ LR +A A L+F S D L R + ++ A
Sbjct: 139 IYFIGTFYDTFESNDPSQKINTVQGLRAIASKYHAGLIFTSYKDDNLANRFKGLIRQLAL 198
Query: 782 SSHLASAVNFDYNKPIFV-PFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQDDP 840
+ + P+F+ P E + YV ++ DD
Sbjct: 199 GETPTGEIITQHISPVFILPDSDKECGGNEIISPYVRQLKSAP-------------PDDD 245
Query: 841 SQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+Q SK P + ++E ID L K +L++ R
Sbjct: 246 AQAASKDDPTSS---KFAEKEIDELAETKERELEEKLR 280
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 568
+ IG YD FE+ +P++K VQ LR +A A L+F S D L R + ++ A
Sbjct: 139 IYFIGTFYDTFESNDPSQKINTVQGLRAIASKYHAGLIFTSYKDDNLANRFKGLIRQLAL 198
Query: 569 SSHLASAVNFDYNKPIFV 586
+ + P+F+
Sbjct: 199 GETPTGEIITQHISPVFI 216
>gi|145535742|ref|XP_001453604.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421326|emb|CAK86207.1| unnamed protein product [Paramecium tetraurelia]
Length = 319
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 39/252 (15%)
Query: 32 QSQ-ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTV-MKDICHLWE 89
QSQ + + + G GKST+V + ++ + L IY ++ + + + +E
Sbjct: 17 QSQLQHSFVFCGQTQSGKSTIVSKLTSQSIQEQAGL----IYTQQKTNIIGYQAVLQYFE 72
Query: 90 LGSGTSRLEVASLFSSFSLTAQS--GFTLVLMLDLSR-----LNSLWTEAETFLAKFRAI 142
+ SG + ++ +L L QS ++ +L++DLS LN TE R I
Sbjct: 73 V-SGQAFKQLLTL----PLNKQSYQQYSYILVIDLSDNPHEILNVCNTE-------IRYI 120
Query: 143 FESNESVREKRGSFEHFRTAD--------EHRDKGLIRTFPVPLILIGGKYDLF-ENLEP 193
E E ++ + F+ + H DK I VP+I++G KYDLF +NL+
Sbjct: 121 KEETEKKLQQSIDVDTFKQLELNIYDKIMMHHDKNRIIPSYVPIIIVGWKYDLFSKNLDQ 180
Query: 194 NKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPI 253
++ + LRYLAH N SL+F S+ D LVK+T L + S A FD+ K +
Sbjct: 181 ESRKWITRGLRYLAHSNNCSLVFGSNQDYQLVKQT---LQYNVKPS--APIYQFDHLKQL 235
Query: 254 FVPFGTDSVASI 265
+ +DS+ +I
Sbjct: 236 CITQLSDSIENI 247
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 466 HFRTADEHRDKGL-----IRTFPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLF- 519
R E +K L + TF + I K + DK I VP+I++G KYDLF
Sbjct: 116 EIRYIKEETEKKLQQSIDVDTFKQLELNIYDKIMMHHDKNRIIPSYVPIIIVGWKYDLFS 175
Query: 520 ENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 579
+NL+ ++ + LRYLAH N SL+F S+ D LVK+T L + S A FD
Sbjct: 176 KNLDQESRKWITRGLRYLAHSNNCSLVFGSNQDYQLVKQT---LQYNVKPS--APIYQFD 230
Query: 580 YNKPIFVPFGTDSVASI 596
+ K + + +DS+ +I
Sbjct: 231 HLKQLCITQLSDSIENI 247
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 679 HFRTADEHRDKGL-----IRTFPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLF- 732
R E +K L + TF + I K + DK I VP+I++G KYDLF
Sbjct: 116 EIRYIKEETEKKLQQSIDVDTFKQLELNIYDKIMMHHDKNRIIPSYVPIIIVGWKYDLFS 175
Query: 733 ENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 792
+NL+ ++ + LRYLAH N SL+F S+ D LVK+T L + S A FD
Sbjct: 176 KNLDQESRKWITRGLRYLAHSNNCSLVFGSNQDYQLVKQT---LQYNVKPS--APIYQFD 230
Query: 793 YNKPIFVPFGTDSVASI 809
+ K + + +DS+ +I
Sbjct: 231 HLKQLCITQLSDSIENI 247
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 296 GWIEGTVTARNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 355
GW + + ++NL+ ++ + LRYLAH N SL+F S+ D LVK+T L + S
Sbjct: 168 GW-KYDLFSKNLDQESRKWITRGLRYLAHSNNCSLVFGSNQDYQLVKQT---LQYNVKPS 223
Query: 356 HLASAVNFDYNKPIFVPFGTDSVASI 381
A FD+ K + + +DS+ +I
Sbjct: 224 --APIYQFDHLKQLCITQLSDSIENI 247
>gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 418
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 30 DIQSQERTLLLIGTKSVGKSTLVFRFLE----------KNDTP-KPTLALEYIYARKSGK 78
++ E L ++G GK++++ R K T KPT AL+Y Y +S +
Sbjct: 78 NLPQSEANLFVVGCSGAGKTSVIQRVCSAIGAGGNTSGKGKTKVKPTTALDYQYTTRSDR 137
Query: 79 TVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSG--FTLVLMLDLSRLNSLWTEAETFL 136
V + + H WEL G +E++ L +T ++ + +++D S +S+W +L
Sbjct: 138 HVSQTV-HFWELAQG---MELSQL-CEVVITPENVHLMHIAIVVDFSDPSSMWDTLAYWL 192
Query: 137 AKFRAIFESNESVREKRGSFE------HFRT----ADEHRDKGLIRTFPVPLILIGGKYD 186
R +NE +++ R H R + H D +R +P +++ K D
Sbjct: 193 K--RVDRRANEILQKMRAKGSNTPDKLHARAQRALGEGHPDLKRVRLSGLPTVIVCNKVD 250
Query: 187 LFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLD 221
F K + +CLR++AH+ GA L+F S D
Sbjct: 251 AFPGPMEQMKTL-TRCLRFIAHLYGAYLVFSSDAD 284
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+R +P +++ K D F K + +CLR++AH+ GA L+F S D K
Sbjct: 235 VRLSGLPTVIVCNKVDAFPGPMEQMKTL-TRCLRFIAHLYGAYLVFSSDADS--AKLRLL 291
Query: 775 ILNHYAFSSHLASAVNFDYNK---------PIFVPFGTDSVASIEGTTQYVTAGSTSSLD 825
+ + + A V D + FV G + + S LD
Sbjct: 292 LNHLLFLTPFDARQVELDVERGTILIMPENDTFVDIGDPPLCDGPSGGPVTQSTGDSELD 351
Query: 826 KYKHIFTTHFLQDDPSQNKSKSAPDPALDQNY-------SEPVIDSLRNQKLEQLDQMRR 878
++K F P ++ D L + Y EP ID++R QK E+L+Q R+
Sbjct: 352 RWKVPLDAMF---PPKAGGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDEELEQYRK 408
Query: 879 EVDMKDK 885
+DK
Sbjct: 409 SAARRDK 415
>gi|261335782|emb|CBH18776.1| dynein light intermediate chain, putative [Trypanosoma brucei
gambiense DAL972]
Length = 416
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 30 DIQSQERTLLLIGTKSVGKSTLVFRFLE----------KNDTP-KPTLALEYIYARKSGK 78
++ E L ++G GK++++ R K T KPT AL+Y Y +S +
Sbjct: 76 NLPQSEANLFVVGCSGAGKTSVIQRVCSAIGAGGNTSGKGKTKVKPTTALDYQYTTRSDR 135
Query: 79 TVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSG--FTLVLMLDLSRLNSLWTEAETFL 136
V + + H WEL G +E++ L +T ++ + +++D S +S+W +L
Sbjct: 136 HVSQTV-HFWELAQG---MELSQL-CEVVITPENVHLMHIAIVVDFSDPSSMWDTLAYWL 190
Query: 137 AKFRAIFESNESVREKRGSFE------HFRT----ADEHRDKGLIRTFPVPLILIGGKYD 186
R +NE +++ R H R + H D +R +P +++ K D
Sbjct: 191 K--RVDRRANEILQKMRAKGSNTPDKLHARAQRALGEGHPDLKRVRLSGLPTVIVCNKVD 248
Query: 187 LFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLD 221
F K + +CLR++AH+ GA L+F S D
Sbjct: 249 AFPGPMEQMKTL-TRCLRFIAHLYGAYLVFSSDAD 282
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+R +P +++ K D F K + +CLR++AH+ GA L+F S D K
Sbjct: 233 VRLSGLPTVIVCNKVDAFPGPMEQMKTL-TRCLRFIAHLYGAYLVFSSDADS--AKLRLL 289
Query: 775 ILNHYAFSSHLASAVNFDYNK---------PIFVPFGTDSVASIEGTTQYVTAGSTSSLD 825
+ + + A V D + FV G + + S LD
Sbjct: 290 LNHLLFLTPFDARQVELDVERGTILIMPENDTFVDIGDPPLCDGPSGGPVTQSTGDSELD 349
Query: 826 KYKHIFTTHFLQDDPSQNKSKSAPDPALDQNY-------SEPVIDSLRNQKLEQLDQMRR 878
++K F P ++ D L + Y EP ID++R QK E+L+Q R+
Sbjct: 350 RWKVPLDAMF---PPKAGGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDEELEQYRK 406
Query: 879 EVDMKDK 885
+DK
Sbjct: 407 SAARRDK 413
>gi|328703765|ref|XP_003242299.1| PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like
[Acyrthosiphon pisum]
Length = 119
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 775 ILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTH 834
+++HY F + + +D NKP+ VP G+D I+ + AGS S+ KYK +F ++
Sbjct: 1 MMSHYGFGTPYPKNLIYDSNKPLLVPAGSDCFDKIDNLNE---AGSIRSMHKYKSVFASN 57
Query: 835 FLQ---DDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQL 873
F Q + + S DP D NY++P+ID +K E+L
Sbjct: 58 FKQISLESGAHASSTDNTDPLNDPNYADPLIDESLKKKQEEL 99
>gi|398021182|ref|XP_003863754.1| dynein light intermediate chain, putative [Leishmania donovani]
gi|322501987|emb|CBZ37071.1| dynein light intermediate chain, putative [Leishmania donovani]
Length = 425
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 117/288 (40%), Gaps = 32/288 (11%)
Query: 26 VHKIDIQSQERTLLLIGTKSVGKSTLV------FRFLEKNDTP---KPTLALEYIYARKS 76
V +++ E +L+++G GK+TL+ F+ P K T AL+Y +AR+S
Sbjct: 81 VKDANVEQTETSLVMVGASGSGKTTLLHRIYTSFQSSSSGSGPKRVKATTALDYSFARRS 140
Query: 77 GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 136
+ V + H WE+ GT ++ + + +V+ L W A +L
Sbjct: 141 ERNVAP-VAHFWEIAQGTQFSQLLDIVLTPENVHAVAAAVVVDASEEGLPVAWETATYWL 199
Query: 137 AKFRAIFESNESVREKRGSFEHFRTAD--------EHRDKGLIRTFPVPLILIGGKYDLF 188
+ + +GS + +H D +R +P +L+ K D F
Sbjct: 200 RRLDQRVSDISQRMKAKGSTTPAKILTRAQKAIGLDHPDLKRMRLSGIPTVLVVNKIDAF 259
Query: 189 ENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL------- 241
+ + ++ + +RYLAH+ GA ++F S + R R ++N F +
Sbjct: 260 RG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQE---SVRWRALMNFTLFQAPFDPKYLQT 315
Query: 242 ---ASAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASLESGGRGFNRS 286
SAV ++ F+ G V+ + G+ DA L+ F+ +
Sbjct: 316 DPERSAVLLTVDRDSFLDIGDPDVSRLGGSVSTGDAELDRWKAPFDEA 363
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+R +P +L+ K D F + + ++ + +RYLAH+ GA ++F S + R R
Sbjct: 242 MRLSGIPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQE---SVRWRA 297
Query: 775 ILNHYAFSSHL----------ASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSL 824
++N F + SAV ++ F+ G V+ + G+ V+ G + L
Sbjct: 298 LMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPDVSRLGGS---VSTGD-AEL 353
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYS-------EPVIDSLRNQKLEQLDQMR 877
D++K F F ++ + K DP + + Y +PVID+LR QK E+L+Q R
Sbjct: 354 DRWKAPFDEAFPPKKLNE-EDKVVDDPFIRRLYDTAEGGFGDPVIDALRKQKDEELEQYR 412
Query: 878 RE 879
++
Sbjct: 413 KK 414
>gi|157874331|ref|XP_001685649.1| putative dynein light intermediate chain [Leishmania major strain
Friedlin]
gi|68128721|emb|CAJ08854.1| putative dynein light intermediate chain [Leishmania major strain
Friedlin]
Length = 425
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 117/288 (40%), Gaps = 32/288 (11%)
Query: 26 VHKIDIQSQERTLLLIGTKSVGKSTLVFRF---LEKNDTP------KPTLALEYIYARKS 76
V +++ E +L+++G GK+TL+ R + N + K T AL+Y +AR+S
Sbjct: 81 VKDANVEQTETSLVVVGASGSGKTTLLHRIYTSFQSNSSGSGPKRVKATTALDYSFARRS 140
Query: 77 GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 136
+ V + H WE+ GT ++ + + +V+ L W A +L
Sbjct: 141 ERNVAP-VAHFWEIAQGTQFSQLLDIVVTPENVHAVVAAVVVDASEEGLPVAWETATYWL 199
Query: 137 AKFRAIFESNESVREKRGSFEHFRTAD--------EHRDKGLIRTFPVPLILIGGKYDLF 188
+ + +GS + +H D +R VP +L+ K D F
Sbjct: 200 RRLDQRVSDISQRMKAKGSTTPAKILTRAQKAIGLDHPDLKRMRLSGVPTVLVINKIDAF 259
Query: 189 ENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL------- 241
+ + + + +RYLAH+ GA ++F S + R R ++N F +
Sbjct: 260 RR-DMQQLKFLCRSMRYLAHLYGAHVVFTSEQE---SVRWRALMNFTLFQAPFDPKYLQT 315
Query: 242 ---ASAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASLESGGRGFNRS 286
SAV ++ F+ G V+ + G+ DA L+ F+ +
Sbjct: 316 DPERSAVLLTVDRDSFLDIGDPDVSRLGGSASTGDAELDRWKAPFDEA 363
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+R VP +L+ K D F + + + + +RYLAH+ GA ++F S + R R
Sbjct: 242 MRLSGVPTVLVINKIDAFRR-DMQQLKFLCRSMRYLAHLYGAHVVFTSEQE---SVRWRA 297
Query: 775 ILNHYAFSSHL----------ASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSL 824
++N F + SAV ++ F+ G V+ + G+ + + L
Sbjct: 298 LMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPDVSRLGGSA----STGDAEL 353
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYS-------EPVIDSLRNQKLEQLDQMR 877
D++K F F ++ + K DP + + Y +PVID+LR QK E+L+Q R
Sbjct: 354 DRWKAPFDEAFPPKKLNE-EGKVVDDPFIRRLYDTSEGGFGDPVIDALRKQKDEELEQYR 412
>gi|358335871|dbj|GAA54470.1| dynein light intermediate chain 2 cytosolic [Clonorchis sinensis]
Length = 141
Score = 58.5 bits (140), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 769 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGS----TSSL 824
+KR + +LNH AF + V + KP+ +P G D ++I Y S + L
Sbjct: 1 MKRIKAVLNHIAFGTPEQRVVQTELGKPLSIPEGADCFSNIGAPPNYELEVSRLTAKTPL 60
Query: 825 DKYKHIFTTHFLQDDPSQNKSKS--------APDPALDQNYSEPVIDSLRNQKLEQLD-- 874
+ +K +F F Q +QN+ A DPA D Y+EP++D R K E+L+
Sbjct: 61 EMWKAVFCARFPQ--MTQNELAGLNSIVLDMATDPAKDPQYAEPLVDRARASKDEELERI 118
Query: 875 QMRREVDMKD 884
Q + E M+D
Sbjct: 119 QQQNERRMRD 128
>gi|146097038|ref|XP_001468017.1| putative dynein light intermediate chain [Leishmania infantum
JPCM5]
gi|134072383|emb|CAM71091.1| putative dynein light intermediate chain [Leishmania infantum
JPCM5]
Length = 424
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 32/288 (11%)
Query: 26 VHKIDIQSQERTLLLIGTKSVGKSTLV------FRFLEKNDTP---KPTLALEYIYARKS 76
+ +++ E +L+++G GK+TL+ F+ P K T AL+Y +AR+S
Sbjct: 81 IKDANVEQTETSLVMVGASGSGKTTLLHRIYTSFQSSSSGSGPKRVKATTALDYSFARRS 140
Query: 77 GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 136
+ V + H WE+ GT ++ + + +V+ L W A +L
Sbjct: 141 ERNVAP-VAHFWEIAQGTQFSQLLDIVLTPENVHAVAAAVVVDASEEGLPVSWETATYWL 199
Query: 137 AKFRAIFESNESVREKRGSFEHFRTAD--------EHRDKGLIRTFPVPLILIGGKYDLF 188
+ + +GS + +H D +R +P +L+ K D F
Sbjct: 200 RRLDQRVSDISQRMKAKGSTTPAKILTRAQKAIGLDHPDLKRMRLSGIPTVLVVNKIDAF 259
Query: 189 ENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL------- 241
+ + ++ + +RYLAH+ GA ++F S + R R ++N F +
Sbjct: 260 RG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQE---SVRWRALMNFTLFQAPFDPKYLQT 315
Query: 242 ---ASAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASLESGGRGFNRS 286
SAV ++ F+ G V+ + G+ DA L+ F+ +
Sbjct: 316 DPERSAVLLTVDRDSFLDIGDPDVSRLGGSVSTGDAELDRWKAPFDEA 363
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 29/183 (15%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+R +P +L+ K D F + + ++ + +RYLAH+ GA ++F S + R R
Sbjct: 242 MRLSGIPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQE---SVRWRA 297
Query: 775 ILNHYAFSSHL----------ASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSL 824
++N F + SAV ++ F+ G V+ + G+ V+ G + L
Sbjct: 298 LMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPDVSRLGGS---VSTGD-AEL 353
Query: 825 DKYKHIFTTHFLQDDPSQ-NKSKSAPDPALDQNYS-------EPVIDSLRNQKLEQLDQM 876
D++K F F P + N+ K DP + + Y +PVID+LR QK E+L+Q
Sbjct: 354 DRWKAPFDEAF---PPKKLNEDKVMDDPFIRRLYDTAEGGFGDPVIDALRKQKDEELEQY 410
Query: 877 RRE 879
R++
Sbjct: 411 RKK 413
>gi|401427381|ref|XP_003878174.1| putative dynein light intermediate chain [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494421|emb|CBZ29723.1| putative dynein light intermediate chain [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 425
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 112/279 (40%), Gaps = 32/279 (11%)
Query: 26 VHKIDIQSQERTLLLIGTKSVGKSTLVFRF---LEKNDTP------KPTLALEYIYARKS 76
V ++ E +L+++G GK+TL+ R + N + K T AL+Y +AR+S
Sbjct: 81 VKDASVEQTETSLVVVGASGSGKTTLLHRIYTSFQSNSSGSGPKRVKATTALDYSFARRS 140
Query: 77 GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 136
+ V + H WE+ GT ++ + + +V+ L W A +L
Sbjct: 141 ERNVAP-VAHFWEIAQGTQFSQLLDIVVTPENVHAVVAAVVVDASEEGLPVAWETATYWL 199
Query: 137 AKFRAIFESNESVREKRGSFEHFRTAD--------EHRDKGLIRTFPVPLILIGGKYDLF 188
+ + +GS + +H D +R VP +L+ K D F
Sbjct: 200 RRLDQRVSDISQRMKAKGSTTPAKILTRAQKAIGLDHPDLKRMRLSGVPTVLVINKIDAF 259
Query: 189 ENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHL------- 241
+ + + +RYLAH+ GA ++F S + R R ++N F +
Sbjct: 260 RG-HTQQLKFLCRSMRYLAHLYGAHVVFTSEQE---SVRWRALMNFTLFQAPFDPKYLQT 315
Query: 242 ---ASAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASLE 277
SAV ++ F+ G +V+ + G DA L+
Sbjct: 316 DPERSAVLLTVDRDSFLDIGDPNVSRLGGGASTGDAELD 354
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 32/185 (17%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+R VP +L+ K D F + + + +RYLAH+ GA ++F S + R R
Sbjct: 242 MRLSGVPTVLVINKIDAFRG-HTQQLKFLCRSMRYLAHLYGAHVVFTSEQE---SVRWRA 297
Query: 775 ILNHYAFSSHL----------ASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSL 824
++N F + SAV ++ F+ G +V+ + G + + L
Sbjct: 298 LMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPNVSRLGGGA----STGDAEL 353
Query: 825 DKYKHIFTTHF----------LQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLD 874
D++K F F + DDP + + + +PVID+LR QK E+L+
Sbjct: 354 DRWKAPFDEAFPPKKLNEEDRVMDDPFIRRLYDT----AEGGFGDPVIDALRKQKDEELE 409
Query: 875 QMRRE 879
Q R++
Sbjct: 410 QYRKK 414
>gi|170581875|ref|XP_001895877.1| dynein 2 light intermediate chain [Brugia malayi]
gi|158597036|gb|EDP35273.1| dynein 2 light intermediate chain, putative [Brugia malayi]
Length = 140
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 767 GLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTA-----GST 821
L+ +TR +++ F + + + D+NKP+ VP G DS+ I G ++ + G+T
Sbjct: 3 NLISKTRVLISSVVFGTTASKTICTDHNKPLSVPCGADSLMDI-GAPPFINSSLSLIGAT 61
Query: 822 SSLDKYKHIFTTHFLQDDPSQNKSKSAPD-PALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+ D + + HF P++ K D PA D + EP ID L Q+ +L+Q R
Sbjct: 62 NPRDLWYEAYLEHF----PNKEKHNEREDNPAEDGQHKEPEIDELIEQRTRELEQYIR 115
>gi|402581974|gb|EJW75921.1| hypothetical protein WUBG_13172 [Wuchereria bancrofti]
Length = 148
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 759 LFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTA 818
+F + ++ L+ + R +++ F + + + D+NKP+ VP G DS+ I G ++ +
Sbjct: 4 MFSNKME-NLISKIRILISSVVFGTTASKTICTDHNKPLSVPRGADSLMDI-GAPPFINS 61
Query: 819 -----GSTSSLDKYKHIFTTHFLQDDPSQNKSKSAPD-PALDQNYSEPVIDSLRNQKLEQ 872
G+T+ D + + HF P++ K K D PA D + EP ID L Q+ +
Sbjct: 62 SLSLIGATNPRDLWHEAYLEHF----PTKEKHKEREDNPAEDGQHREPEIDELIEQRTRE 117
Query: 873 LDQ 875
L+Q
Sbjct: 118 LEQ 120
>gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus]
Length = 134
Score = 53.1 bits (126), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 10/123 (8%)
Query: 762 SSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEG----TTQYVT 817
+S L+ + R ++N AF + ++ D NKP+F+ G DS+ I +
Sbjct: 3 TSKSEALLLKMRGVINQLAFGIDKSKSMCVDQNKPLFITAGLDSLCQIGSPPVPDSDIGK 62
Query: 818 AGSTSSLDKYKHIFTTHFLQDDPSQNKS--KSAPDPALDQNYSEPVIDSLRNQKLEQLDQ 875
+ S ++ +K ++ F P ++ S K+ DPA D Y+E +D +R QK ++L+Q
Sbjct: 63 LQAHSPMELWKKVYEKLF----PPKSTSTLKAIQDPARDPQYAESEVDEMRVQKDQELEQ 118
Query: 876 MRR 878
+R
Sbjct: 119 YKR 121
>gi|154343515|ref|XP_001567703.1| putative dynein light intermediate chain [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065035|emb|CAM43147.1| putative dynein light intermediate chain [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 428
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 22/231 (9%)
Query: 26 VHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTP---------KPTLALEYIYARKS 76
V ++ E L+++G GK+TL+ R + K T AL+Y +AR+S
Sbjct: 81 VKDAAVEQTEINLVVVGAPGSGKTTLLHRIYTSFQSSASGSCSKRVKATTALDYSFARRS 140
Query: 77 GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL 136
+ V + H WE+ G ++ + + +V+ L W A ++
Sbjct: 141 ERNVAP-VAHFWEIAQGMQFSQLLDVVVTPENVHAIVAAVVVDASEEGLPVAWEAATYWM 199
Query: 137 AKFRAIFESNESVREKRGSF--EHFRTAD------EHRDKGLIRTFPVPLILIGGKYDLF 188
+ + +GS E T EH D +R VP +L+ K D F
Sbjct: 200 RRIDQRVSDISQRMKAKGSTTPEKLLTRAQKAVGLEHPDLKRMRLSGVPTVLVVNKIDAF 259
Query: 189 ENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSS 239
+ + ++ + +RYLAH+ GA ++F S + R R ++N F +
Sbjct: 260 RG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQE---SVRWRALMNFTLFQA 306
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 715 IRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRD 774
+R VP +L+ K D F + + ++ + +RYLAH+ GA ++F S + R R
Sbjct: 242 MRLSGVPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQE---SVRWRA 297
Query: 775 ILNHYAFSS-----HLAS-----AVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSL 824
++N F + HL + AV ++ F+ G +++ + G + + L
Sbjct: 298 LMNFTLFQAPFDPKHLQTDPERGAVLLTADRDSFLDIGDPNMSRLGGGGSSAST-GDAEL 356
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYS-------EPVIDSLRNQKLEQLDQMR 877
D++K F F ++ + K DP + + Y EP+ID+LR QK E+L+Q R
Sbjct: 357 DRWKVPFDDAFPPKKLNE-EDKVMDDPFIRRLYDTSEGGFGEPMIDTLRKQKDEELEQYR 415
Query: 878 R 878
+
Sbjct: 416 K 416
>gi|320168623|gb|EFW45522.1| dynein light intermediate chain [Capsaspora owczarzaki ATCC 30864]
Length = 467
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 55/274 (20%)
Query: 37 TLLLIGTKSVGKSTLVFRF----------LEKNDTPKPTLALEYIYA--RKSGKTVMKDI 84
++L++G K GKSTL+ R + L LEY YA +
Sbjct: 47 SVLVLGPKDAGKSTLLARMRFDAGATTTTTNAAQLVRDGLGLEYAYAEVKDEDNEDFSAQ 106
Query: 85 CHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE 144
+W L L+ ++L S+ + +G VL +DLS+ W+ E+ RA+ E
Sbjct: 107 IGVWSLDGDL--LQPSTLASALNENNFAGMLAVLAVDLSQP---WSILESLKQYTRALEE 161
Query: 145 SNESV--------REKRGSFEHFRTADEHRDKG--------------LIRTFPVPLILIG 182
E++ K F+T E + L R +P++++
Sbjct: 162 HIETLVGIEDQLPELKAKLVRAFQTYSEGKAVADGSEAVLAPLEHDVLSRNLGLPIVVVA 221
Query: 183 GKYDLFENLEPN-----------KKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 231
K DL LE + + + CLRY GA+L++ S+ + V R
Sbjct: 222 CKSDLLSTLERDYNYKDEHYDFIQHHLRKFCLRY-----GAALVYTSAKESKNVDLLRKY 276
Query: 232 LNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
+ H F + + +FVP G DS A I
Sbjct: 277 ICHRQFGMAFNQSGSIAEKDAVFVPMGWDSDAKI 310
>gi|429327073|gb|AFZ78865.1| Ras family protein [Coptotermes formosanus]
Length = 208
Score = 42.7 bits (99), Expect = 0.90, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 45/179 (25%)
Query: 27 HKIDIQSQE-RTLLLIGTKSVGKSTLVFRFLEK--NDTPKPTLALEYIYARKSGKTVMKD 83
H + QE LL++G GKS+++ RF+EK N++ K T+ +E+ S + + D
Sbjct: 4 HHQKTEEQEILKLLVVGDIGCGKSSIIRRFVEKQFNESSKSTVGVEFY----SKEVTLSD 59
Query: 84 ICH----LWELGSGTS-RLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 138
H LW++G +S +L S + + ++++ D+ R +L T +
Sbjct: 60 KKHYQVQLWDVGGQSSAQLLTRSFY-------KGAVAVLIVFDVVRPATLVTAGQWKQ-- 110
Query: 139 FRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKR 197
+ ++ V+ +GS PVP ILIG K DL+ N + K++
Sbjct: 111 -----DVDQKVKNLQGS-------------------PVPCILIGNKSDLYSNDQEIKEK 145
>gi|358335870|dbj|GAA54469.1| dynein light intermediate chain 2 cytosolic, partial [Clonorchis
sinensis]
Length = 68
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 147 ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLF 188
ES++ K R H DK L+ FP+PL++IG KYDL
Sbjct: 26 ESLKSKYRELREARKTSTHPDKDLLNPFPLPLVIIGSKYDLL 67
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 455 ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLF 496
ES++ K R H DK L+ FP+PL++IG KYDL
Sbjct: 26 ESLKSKYRELREARKTSTHPDKDLLNPFPLPLVIIGSKYDLL 67
>gi|195149189|ref|XP_002015540.1| GL11127 [Drosophila persimilis]
gi|194109387|gb|EDW31430.1| GL11127 [Drosophila persimilis]
Length = 285
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 36/151 (23%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRL 97
L+L+G VGKS++V RFL K T K +E +Y R+ ++LG T ++
Sbjct: 9 LVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNRE------------YDLGGVTLKV 56
Query: 98 EVASLFSSFSLTAQSGFTLVLMLDLSRLNS-LWTEAETFLAKFRAIFESNESVREKRGSF 156
++ + F + L ++ ++ + A T F+ + + E +RE+RG F
Sbjct: 57 DI------LDTSGDMQFPAMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDF 110
Query: 157 EHFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
+ +P+++ G K DL
Sbjct: 111 QD-----------------IPIVIAGNKADL 124
>gi|194863974|ref|XP_001970707.1| GG23233 [Drosophila erecta]
gi|190662574|gb|EDV59766.1| GG23233 [Drosophila erecta]
Length = 279
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 36/151 (23%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRL 97
L+L+G VGKS++V RFL K+ T K +E +Y R+ ++LG T ++
Sbjct: 9 LVLLGGAGVGKSSIVKRFLFKSYTDKYRATVEDLYNRE------------YDLGGVTLKV 56
Query: 98 EVASLFSSFSLTAQSGFTLVLMLDLSRLNS-LWTEAETFLAKFRAIFESNESVREKRGSF 156
++ + F + L ++ ++ + A T F+ + + E +RE+RG F
Sbjct: 57 DI------LDTSGDMQFPAMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDF 110
Query: 157 EHFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
+ +P+++ G K DL
Sbjct: 111 QD-----------------IPIVIAGNKADL 124
>gi|158292876|ref|XP_314163.4| AGAP005248-PA [Anopheles gambiae str. PEST]
gi|157017198|gb|EAA09470.4| AGAP005248-PA [Anopheles gambiae str. PEST]
Length = 280
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 36/151 (23%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRL 97
L+++G VGKS ++ RFL K + K +E +Y R+ ++LGS T ++
Sbjct: 9 LVILGGAGVGKSCIIKRFLFKTYSDKYRPTVEDLYNRE------------YDLGSVTLKV 56
Query: 98 EVASLFSSFSLTAQSGFTLVLMLDLSRLNS-LWTEAETFLAKFRAIFESNESVREKRGSF 156
++ + + F + L ++ ++ L A T A + + E +RE+R F
Sbjct: 57 DI------LDTSGEMQFPAMRRLSIATAHAFLLVYATTSEASLGCVKQCFEEIREQRADF 110
Query: 157 EHFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
+ +P++++G KYDL
Sbjct: 111 QD-----------------IPMVIVGNKYDL 124
>gi|194755429|ref|XP_001959994.1| GF13148 [Drosophila ananassae]
gi|190621292|gb|EDV36816.1| GF13148 [Drosophila ananassae]
Length = 278
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 36/151 (23%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRL 97
L+L+G VGKS++V RFL K T K +E +Y R+ ++LG T ++
Sbjct: 9 LVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNRE------------YDLGGVTLKV 56
Query: 98 EVASLFSSFSLTAQSGFTLVLMLDLSRLNS-LWTEAETFLAKFRAIFESNESVREKRGSF 156
++ + F + L ++ ++ + A T F+ + + E +RE+RG F
Sbjct: 57 DI------LDTSGDMQFPAMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDF 110
Query: 157 EHFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
+ +P+++ G K DL
Sbjct: 111 QD-----------------IPIVIAGNKADL 124
>gi|125806780|ref|XP_001360167.1| GA15685 [Drosophila pseudoobscura pseudoobscura]
gi|54635338|gb|EAL24741.1| GA15685 [Drosophila pseudoobscura pseudoobscura]
Length = 280
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 36/151 (23%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRL 97
L+L+G VGKS++V RFL K T K +E +Y R+ ++LG T ++
Sbjct: 9 LVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNRE------------YDLGGVTLKV 56
Query: 98 EVASLFSSFSLTAQSGFTLVLMLDLSRLNS-LWTEAETFLAKFRAIFESNESVREKRGSF 156
++ + F + L ++ ++ + A T F+ + + E +RE+RG F
Sbjct: 57 DI------LDTSGDMQFPAMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDF 110
Query: 157 EHFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
+ +P+++ G K DL
Sbjct: 111 QD-----------------IPIVIAGNKADL 124
>gi|21744275|gb|AAM76196.1| RE28276p [Drosophila melanogaster]
Length = 280
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 40/153 (26%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARK---SGKTVMKDICHLWELGSGT 94
L+L+G VGKS++V RFL K T K +E +Y R+ G T+ DI GT
Sbjct: 9 LVLLGGTGVGKSSIVKRFLFKTYTDKYRATVEDLYNREYDLGGVTLKVDIL-------GT 61
Query: 95 SRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRG 154
S S+ F LV A T F+ + + E +RE+RG
Sbjct: 62 SGDMQFPAMRRLSIATAHAFMLVY-------------AATSAPSFQCVKQCFEEIREQRG 108
Query: 155 SFEHFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
F+ +P+++ G K DL
Sbjct: 109 DFQD-----------------IPIVIAGNKADL 124
>gi|195426527|ref|XP_002061380.1| GK20887 [Drosophila willistoni]
gi|194157465|gb|EDW72366.1| GK20887 [Drosophila willistoni]
Length = 275
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 36/151 (23%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRL 97
L+L+G VGKS++V RFL K T K +E +Y R+ ++LG T ++
Sbjct: 9 LVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNRE------------YDLGGVTLKV 56
Query: 98 EVASLFSSFSLTAQSGFTLVLMLDLSRLNS-LWTEAETFLAKFRAIFESNESVREKRGSF 156
++ + F + L ++ ++ + A T F+ + + E +RE+RG F
Sbjct: 57 DI------LDTSGDMQFPAMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDF 110
Query: 157 EHFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
+ +P+++ G K DL
Sbjct: 111 QD-----------------IPIVIAGNKADL 124
>gi|45550886|ref|NP_652315.2| CG30158 [Drosophila melanogaster]
gi|45445442|gb|AAF57410.3| CG30158 [Drosophila melanogaster]
Length = 280
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 36/151 (23%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRL 97
L+L+G VGKS++V RFL K T K +E +Y R+ ++LG T ++
Sbjct: 9 LVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNRE------------YDLGGVTLKV 56
Query: 98 EVASLFSSFSLTAQSGFTLVLMLDLSRLNS-LWTEAETFLAKFRAIFESNESVREKRGSF 156
++ + F + L ++ ++ + A T F+ + + E +RE+RG F
Sbjct: 57 DI------LDTSGDMQFPAMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDF 110
Query: 157 EHFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
+ +P+++ G K DL
Sbjct: 111 QD-----------------IPIVIAGNKADL 124
>gi|195331953|ref|XP_002032663.1| GM20906 [Drosophila sechellia]
gi|194124633|gb|EDW46676.1| GM20906 [Drosophila sechellia]
Length = 280
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 36/151 (23%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRL 97
L+L+G VGKS++V RFL K T K +E +Y R+ ++LG T ++
Sbjct: 9 LVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNRE------------YDLGGVTLKV 56
Query: 98 EVASLFSSFSLTAQSGFTLVLMLDLSRLNS-LWTEAETFLAKFRAIFESNESVREKRGSF 156
++ + F + L ++ ++ + A T F+ + + E +RE+RG F
Sbjct: 57 DI------LDTSGDMQFPAMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDF 110
Query: 157 EHFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
+ +P+++ G K DL
Sbjct: 111 QD-----------------IPIVIAGNKSDL 124
>gi|395825647|ref|XP_003786036.1| PREDICTED: spermatogenesis-associated protein 9 [Otolemur
garnettii]
Length = 253
Score = 40.0 bits (92), Expect = 5.3, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKR 153
++++ SLF S A++ T ++ + L L L K + IF+ ES+R+ R
Sbjct: 124 SAQVRKGSLFEIISFPAKTALTSIIYASYAALIYLAVCVNAVLEKIKNIFKEEESIRQNR 183
Query: 154 GSFEHFRTA 162
EHFR A
Sbjct: 184 EESEHFRKA 192
>gi|195581058|ref|XP_002080351.1| GD10434 [Drosophila simulans]
gi|194192360|gb|EDX05936.1| GD10434 [Drosophila simulans]
Length = 269
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 45/150 (30%)
Query: 38 LLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRL 97
L+L+G VGKS++V RFL K T K +E +Y R+ ++LG T +
Sbjct: 9 LVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNRE------------YDLGGVTLKF 56
Query: 98 EVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFE 157
S+ F LV A T F+ + + E +RE+RG F+
Sbjct: 57 LA---MRRLSIATAHAFMLVY-------------AATSAPSFQCVKQCFEEIREQRGDFQ 100
Query: 158 HFRTADEHRDKGLIRTFPVPLILIGGKYDL 187
+P+++ G K DL
Sbjct: 101 D-----------------IPIVIAGNKSDL 113
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,167,957,098
Number of Sequences: 23463169
Number of extensions: 619784164
Number of successful extensions: 1333109
Number of sequences better than 100.0: 184
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1331235
Number of HSP's gapped (non-prelim): 870
length of query: 890
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 738
effective length of database: 8,792,793,679
effective search space: 6489081735102
effective search space used: 6489081735102
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)