Your job contains 1 sequence.
>psy11649
MGPKSLKDIAIELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKND
TPKPTLALEYIYARKSGKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLML
DLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLIL
IGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSH
LASAVNFDYNKPIFVPFGTDSVASIEGTTHGKDASLESGGRGFNRSRGMKFEKKRGWIEG
TVTARNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASA
VNFDYNKPIFVPFGTDSVASIEGTTQYVTADICHLWELGSGTSRLEVASLFSSFSLTAQS
GFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIR
TFPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHV
NGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTT
QYVTADTEVGRKHLTTKYSSNSALGLMNDNPLWIVIPKLGLHNTHHICYDHPCNKHVENQ
GWIIKILKWVVSSRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPV
PLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYA
FSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTAGSTSSLDKYKHIFTTHFLQDDP
SQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRREVDMKDKYRTRV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11649
(890 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-1230 - symbol:dync2li1 "dynein, cyto... 427 3.5e-40 2
UNIPROTKB|Q32KV4 - symbol:DYNC2LI1 "Cytoplasmic dynein 2 ... 429 2.4e-39 1
MGI|MGI:1913996 - symbol:Dync2li1 "dynein cytoplasmic 2 l... 425 6.4e-39 1
RGD|1310286 - symbol:Dync2li1 "dynein cytoplasmic 2 light... 418 3.6e-38 1
UNIPROTKB|Q8TCX1 - symbol:DYNC2LI1 "Cytoplasmic dynein 2 ... 417 4.6e-38 1
UNIPROTKB|E2R699 - symbol:DYNC2LI1 "Uncharacterized prote... 416 6.0e-38 1
UNIPROTKB|F1NGV6 - symbol:DYNC2LI1 "Uncharacterized prote... 410 2.6e-37 1
WB|WBGene00006960 - symbol:xbx-1 species:6239 "Caenorhabd... 325 3.6e-28 1
UNIPROTKB|F8W853 - symbol:DYNC2LI1 "Cytoplasmic dynein 2 ... 255 1.1e-20 1
UNIPROTKB|Q7XA07 - symbol:D1BLIC "Cytoplasmic dynein 2 li... 237 1.0e-16 1
>ZFIN|ZDB-GENE-040426-1230 [details] [associations]
symbol:dync2li1 "dynein, cytoplasmic 2, light
intermediate chain 1" species:7955 "Danio rerio" [GO:0042073
"intraflagellar transport" evidence=IMP] [GO:0005622
"intracellular" evidence=IMP] [GO:0031513 "nonmotile primary
cilium" evidence=IMP] [GO:0030286 "dynein complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] ZFIN:ZDB-GENE-040426-1230
GO:GO:0007275 GO:GO:0005737 GO:GO:0005874 GO:GO:0042073
GO:GO:0035085 GO:GO:0030286 GO:GO:0003774 GO:GO:0031513
InterPro:IPR022780 Pfam:PF05783 CTD:51626 eggNOG:NOG256387
HOGENOM:HOG000006828 HOVERGEN:HBG066237 KO:K10417 OrthoDB:EOG4W0XDP
EMBL:BC055198 IPI:IPI00497135 RefSeq:NP_956774.1 UniGene:Dr.117470
ProteinModelPortal:Q7SXY4 GeneID:393452 KEGG:dre:393452
InParanoid:Q7SXY4 NextBio:20814488 Uniprot:Q7SXY4
Length = 358
Score = 427 (155.4 bits), Expect = 3.9e-39, P = 3.9e-39
Identities = 94/271 (34%), Positives = 155/271 (57%)
Query: 5 SLKDIAIELAHGKHPSPSSSEVHKIDIQ-SQERTLLLIGTKSVGKSTLVFRFLEKNDTPK 63
+L DIA + E + D +RT+ +G+K+ GK+T++ RFLE+++T K
Sbjct: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67
Query: 64 PTLALEYIYARKS-GKTVMKDICHLWELGSGTSRLEVASLFSSFSLTAQ--SGFTLVLML 120
PTLALEY + R++ G KDI HLWELG G S ++ + +TA S ++VL+L
Sbjct: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQI----PITADNVSFLSVVLVL 123
Query: 121 DLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTA------DEHRDKGLIRTF 174
DLS+ N+LW E+ L R E + +K G + ++ D+ LI F
Sbjct: 124 DLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPF 183
Query: 175 PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNH 234
PVPL+++G K+D+F++ + K+++ + LR+LAH GASL+F SS + ++R +N
Sbjct: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243
Query: 235 YAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
AF + +++ D +KP+ +P G+DS++ I
Sbjct: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274
Score = 301 (111.0 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 62/175 (35%), Positives = 105/175 (60%)
Query: 709 FEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGL 768
+ D+ LI FPVPL+++G K+D+F++ + K+++ + LR+LAH GASL+F SS
Sbjct: 174 YPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233
Query: 769 VKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIE---GTTQYV-TAGSTSSL 824
+ ++R +N AF + +++ D +KP+ +P G+DS++ I T + T + +
Sbjct: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293
Query: 825 DKYKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRRE 879
D +K +F F + S + K DP D +SEP+IDS+R QK ++LDQ +RE
Sbjct: 294 DLWKKVFEKVFPHE--STRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346
Score = 227 (85.0 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 53/171 (30%), Positives = 95/171 (55%)
Query: 444 LAKFRAIFESNESVR-EKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLI 502
L+K A++E+ ES+ R E A + + VP +L + + D+ LI
Sbjct: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL----HKDYPDRELI 180
Query: 503 RTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDI 562
FPVPL+++G K+D+F++ + K+++ + LR+LAH GASL+F SS + ++R
Sbjct: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240
Query: 563 LNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
+N AF + +++ D +KP+ +P G+DS++ I G V + ++G H
Sbjct: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI-GPP--VATEVDIGTLH 288
Score = 165 (63.1 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 41/116 (35%), Positives = 63/116 (54%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQ--SGFTLVLMLDLSRLNSLWTEAETFLAKFR 448
DI HLWELG G S ++ + +TA S ++VL+LDLS+ N+LW E+ L R
Sbjct: 88 DIAHLWELGGGISLSDLVQI----PITADNVSFLSVVLVLDLSKPNALWETMESLLGSAR 143
Query: 449 AIFESNESVREKRGSFEHFRTA------DEHRDKGLIRTFPVPLILIGGKYDLFED 498
E + +K G + ++ D+ LI FPVPL+++G K+D+F+D
Sbjct: 144 NQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD 199
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 25/77 (32%), Positives = 48/77 (62%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR+LAH GASL+F SS + ++R +N AF + +++ D
Sbjct: 198 QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD 257
Query: 365 YNKPIFVPFGTDSVASI 381
+KP+ +P G+DS++ I
Sbjct: 258 PSKPLAIPAGSDSLSQI 274
>UNIPROTKB|Q32KV4 [details] [associations]
symbol:DYNC2LI1 "Cytoplasmic dynein 2 light intermediate
chain 1" species:9913 "Bos taurus" [GO:0035085 "cilium axoneme"
evidence=IEA] [GO:0045177 "apical part of cell" evidence=IEA]
[GO:0042384 "cilium assembly" evidence=IEA] [GO:0031512 "motile
primary cilium" evidence=IEA] [GO:0030990 "intraflagellar transport
particle" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IEA] [GO:0030286 "dynein complex" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0003774 "motor
activity" evidence=IEA] GO:GO:0005737 GO:GO:0045177 GO:GO:0007368
GO:GO:0042384 GO:GO:0005874 GO:GO:0035085 GO:GO:0030286
GO:GO:0003774 InterPro:IPR022780 Pfam:PF05783 EMBL:BC109910
IPI:IPI00697563 RefSeq:NP_001033140.1 UniGene:Bt.10818
STRING:Q32KV4 Ensembl:ENSBTAT00000046128 GeneID:507311
KEGG:bta:507311 CTD:51626 eggNOG:NOG256387
GeneTree:ENSGT00390000010498 HOGENOM:HOG000006828
HOVERGEN:HBG066237 InParanoid:Q32KV4 KO:K10417 OMA:VICKTLR
OrthoDB:EOG4W0XDP NextBio:20868004 GO:GO:0030990 GO:GO:0031512
Uniprot:Q32KV4
Length = 351
Score = 429 (156.1 bits), Expect = 2.4e-39, P = 2.4e-39
Identities = 97/265 (36%), Positives = 158/265 (59%)
Query: 12 ELAHGKHPSPSSSEVHKIDIQSQERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYI 71
E+A + SSE + E+++ IG+K+ GK+T++ R L++++ PKPTLALEY
Sbjct: 8 EIAKAEVEKRGSSENEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYT 67
Query: 72 YARKS-GKTVMKDICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLW 129
Y R++ G + KDI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW
Sbjct: 68 YGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLW 124
Query: 130 TEAETFL--AKF---RAIFE----SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLIL 180
E L K + I + ++++ E R D H D+ L+ FP+PL++
Sbjct: 125 PTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKD-HPDRELLDPFPIPLVI 183
Query: 181 IGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSH 240
IG KYD+F++ + K+++ + LR++AH GASL+F S + L+K R ++N AF +
Sbjct: 184 IGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIN 242
Query: 241 LASAVNFDYNKPIFVPFGTDSVASI 265
+ ++ D NKP+F+ G DS++ I
Sbjct: 243 KSKSICVDQNKPLFITAGLDSLSQI 267
Score = 268 (99.4 bits), Expect = 6.7e-38, Sum P(2) = 6.7e-38
Identities = 58/172 (33%), Positives = 98/172 (56%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ L+ FP+PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+K
Sbjct: 170 DRELLDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK 229
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
R ++N AF + + ++ D NKP+F+ G DS++ I + S +D
Sbjct: 230 -IRGVINQLAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 WKKVYEKLF--PPKSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKR 338
Score = 242 (90.2 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 62/192 (32%), Positives = 104/192 (54%)
Query: 422 FTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRT 481
F++VL+LDLS+ N LW E L +A + + V K G ++ + A E R K
Sbjct: 109 FSIVLVLDLSKPNDLWPTMENLL---QATKLNIDKVIMKLGK-KNSKAASEMRQK----- 159
Query: 482 FPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVN 541
+ D+ L+ FP+PL++IG KYD+F++ + K+++ + LR++AH
Sbjct: 160 ------MWSNMQKDHPDRELLDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYY 213
Query: 542 GASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQ 601
GASL+F S + L+K R ++N AF + + ++ D NKP+F+ G DS++ I G
Sbjct: 214 GASLMFTSKSEALLLK-IRGVINQLAFGINKSKSICVDQNKPLFITAGLDSLSQI-GPPP 271
Query: 602 YVTADTEVGRKH 613
D ++G+ H
Sbjct: 272 L--PDNDIGKLH 281
Score = 177 (67.4 bits), Expect = 6.7e-38, Sum P(2) = 6.7e-38
Identities = 45/121 (37%), Positives = 68/121 (56%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFL-- 444
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 77 IPKDIAHFWELGGGTSLLDLISIPITSDTLRT---FSIVLVLDLSKPNDLWPTMENLLQA 133
Query: 445 AKF---RAIFE----SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
K + I + ++++ E R D H D+ L+ FP+PL++IG KYD+F+
Sbjct: 134 TKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKD-HPDRELLDPFPIPLVIIGSKYDIFQ 192
Query: 498 D 498
D
Sbjct: 193 D 193
Score = 132 (51.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+K R ++N AF + + ++ D
Sbjct: 192 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGINKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS++ I
Sbjct: 251 QNKPLFITAGLDSLSQI 267
>MGI|MGI:1913996 [details] [associations]
symbol:Dync2li1 "dynein cytoplasmic 2 light intermediate
chain 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003774 "motor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005929 "cilium" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0030990 "intraflagellar transport
particle" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0035085 "cilium axoneme" evidence=IDA]
[GO:0042384 "cilium assembly" evidence=IMP] [GO:0042995 "cell
projection" evidence=IEA] [GO:0045177 "apical part of cell"
evidence=IDA] MGI:MGI:1913996 GO:GO:0005737 GO:GO:0045177
GO:GO:0007368 GO:GO:0042384 GO:GO:0005874 GO:GO:0035085
GO:GO:0030286 GO:GO:0003774 InterPro:IPR022780 Pfam:PF05783
CTD:51626 eggNOG:NOG256387 GeneTree:ENSGT00390000010498
HOGENOM:HOG000006828 HOVERGEN:HBG066237 KO:K10417 OMA:VICKTLR
OrthoDB:EOG4W0XDP GO:GO:0031512 EMBL:AK160259 EMBL:BC030450
EMBL:BC039070 IPI:IPI00169638 RefSeq:NP_758460.1 UniGene:Mm.246119
ProteinModelPortal:Q8K0T2 SMR:Q8K0T2 STRING:Q8K0T2
PhosphoSite:Q8K0T2 PaxDb:Q8K0T2 PRIDE:Q8K0T2 DNASU:213575
Ensembl:ENSMUST00000025101 GeneID:213575 KEGG:mmu:213575
UCSC:uc008dsy.1 InParanoid:Q8K0T2 NextBio:374054 Bgee:Q8K0T2
CleanEx:MM_DYNC2LI1 Genevestigator:Q8K0T2 Uniprot:Q8K0T2
Length = 351
Score = 425 (154.7 bits), Expect = 6.4e-39, P = 6.4e-39
Identities = 91/241 (37%), Positives = 146/241 (60%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L+++++ KPTLALEY Y RK+ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDESAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ ++ F++VL+LDLS+ N LW+ E L ++ +
Sbjct: 91 TSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWSTMENLLQATKSHVDKVIMKLGKT 148
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
S+++ E R D H D+ LI FP+PL++IG KYD+F++ +P K+++ + LR
Sbjct: 149 SSKASAEMRQRMWSVVQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLR 207
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+K R ++N AF + ++ D NKP+F+ G DS+
Sbjct: 208 FVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQ 266
Query: 265 I 265
I
Sbjct: 267 I 267
Score = 265 (98.3 bits), Expect = 8.6e-38, Sum P(2) = 8.6e-38
Identities = 57/172 (33%), Positives = 97/172 (56%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+K
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK 229
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
R ++N AF + ++ D NKP+F+ G DS+ I + + S ++
Sbjct: 230 -IRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMEL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S K+ DPA D Y+E +D +R QK ++L+ +R
Sbjct: 289 WKKVYDKLF--PPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKR 338
Score = 242 (90.2 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 63/190 (33%), Positives = 105/190 (55%)
Query: 422 FTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRT 481
F++VL+LDLS+ N LW+ E L +A + V K G +A+ + R
Sbjct: 109 FSIVLVLDLSKPNDLWSTMENLL---QATKSHVDKVIMKLGKTSSKASAEMRQ-----RM 160
Query: 482 FPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVN 541
+ V + D D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH
Sbjct: 161 WSVV------QKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYY 213
Query: 542 GASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQ 601
GASL+F S + L+K R ++N AF + ++ D NKP+F+ G DS+ I G+
Sbjct: 214 GASLMFTSKSEALLLK-IRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQI-GSPP 271
Query: 602 YVTADTEVGR 611
D+++G+
Sbjct: 272 --VPDSDIGK 279
Score = 179 (68.1 bits), Expect = 8.6e-38, Sum P(2) = 8.6e-38
Identities = 43/117 (36%), Positives = 65/117 (55%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ ++ F++VL+LDLS+ N LW+ E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWSTMENLLQATKSH 137
Query: 451 FE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFED 498
+ S+++ E R D H D+ LI FP+PL++IG KYD+F+D
Sbjct: 138 VDKVIMKLGKTSSKASAEMRQRMWSVVQKD-HPDRELIDPFPIPLVIIGSKYDIFQD 193
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/88 (34%), Positives = 52/88 (59%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K+++ + LR++AH GASL+F S + L+K R ++N AF + ++ D
Sbjct: 192 QDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADI 392
NKP+F+ G DS+ I G+ +DI
Sbjct: 251 QNKPLFITAGLDSLCQI-GSPPVPDSDI 277
>RGD|1310286 [details] [associations]
symbol:Dync2li1 "dynein cytoplasmic 2 light intermediate chain
1" species:10116 "Rattus norvegicus" [GO:0003774 "motor activity"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0030286
"dynein complex" evidence=IEA] [GO:0030990 "intraflagellar
transport particle" evidence=IEA] [GO:0031512 "motile primary
cilium" evidence=IEA] [GO:0035085 "cilium axoneme" evidence=IEA]
[GO:0042384 "cilium assembly" evidence=IEA] [GO:0045177 "apical
part of cell" evidence=IEA] RGD:1310286 GO:GO:0005737 GO:GO:0045177
GO:GO:0007368 GO:GO:0042384 GO:GO:0005874 GO:GO:0035085
GO:GO:0030286 GO:GO:0003774 InterPro:IPR022780 Pfam:PF05783
CTD:51626 eggNOG:NOG256387 GeneTree:ENSGT00390000010498
HOGENOM:HOG000006828 HOVERGEN:HBG066237 KO:K10417 GO:GO:0030990
GO:GO:0031512 EMBL:AABR03048845 EMBL:BC079201 IPI:IPI00464564
IPI:IPI00886438 RefSeq:NP_001013962.1 UniGene:Rn.12074
ProteinModelPortal:Q6AY43 STRING:Q6AY43 Ensembl:ENSRNOT00000006953
Ensembl:ENSRNOT00000068030 GeneID:298767 KEGG:rno:298767
UCSC:RGD:1310286 NextBio:644304 Genevestigator:Q6AY43
Uniprot:Q6AY43
Length = 351
Score = 418 (152.2 bits), Expect = 3.6e-38, P = 3.6e-38
Identities = 90/241 (37%), Positives = 144/241 (59%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ KPTLALEY Y RK+ G KDI H WELG G
Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDEPAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE--------- 144
TS L++ S+ ++ F++VL+LDLS+ N LW E L ++ +
Sbjct: 91 TSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWPTMENLLQATKSHVDKVTMKLGKA 148
Query: 145 SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
++++ E R D H D+ LI FP+PL++IG KYD+F++ +P K+++ + LR
Sbjct: 149 NSKASSEMRQRMWSVMQKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLR 207
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+K R ++N AF + ++ D NKP+F+ G DS+
Sbjct: 208 FVAHYYGASLMFTSKSEALLLKM-RGVINQLAFGIDKSKSMCVDQNKPLFITAGLDSLCQ 266
Query: 265 I 265
I
Sbjct: 267 I 267
Score = 268 (99.4 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 58/172 (33%), Positives = 99/172 (57%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH GASL+F S + L+K
Sbjct: 170 DRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK 229
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
R ++N AF + ++ D NKP+F+ G DS+ I + + S ++
Sbjct: 230 M-RGVINQLAFGIDKSKSMCVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMEL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S + K+ DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 289 WKKVYEKLF--PPKSTSTLKAIQDPARDPQYAESEVDEMRVQKDQELEQYKR 338
Score = 243 (90.6 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 64/190 (33%), Positives = 105/190 (55%)
Query: 422 FTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRT 481
F++VL+LDLS+ N LW E L +A + V K G + + + E R R
Sbjct: 109 FSIVLVLDLSKPNDLWPTMENLL---QATKSHVDKVTMKLGK-ANSKASSEMRQ----RM 160
Query: 482 FPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVN 541
+ V + D D+ LI FP+PL++IG KYD+F++ +P K+++ + LR++AH
Sbjct: 161 WSVM------QKD-HPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYY 213
Query: 542 GASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQ 601
GASL+F S + L+K R ++N AF + ++ D NKP+F+ G DS+ I G+
Sbjct: 214 GASLMFTSKSEALLLKM-RGVINQLAFGIDKSKSMCVDQNKPLFITAGLDSLCQI-GSPP 271
Query: 602 YVTADTEVGR 611
D+++G+
Sbjct: 272 --VPDSDIGK 279
Score = 176 (67.0 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 42/117 (35%), Positives = 64/117 (54%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI H WELG GTS L++ S+ ++ F++VL+LDLS+ N LW E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISI--PITVDTLRTFSIVLVLDLSKPNDLWPTMENLLQATKSH 137
Query: 451 FE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFED 498
+ ++++ E R D H D+ LI FP+PL++IG KYD+F+D
Sbjct: 138 VDKVTMKLGKANSKASSEMRQRMWSVMQKD-HPDRELIDPFPIPLVIIGSKYDIFQD 193
Score = 138 (53.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 30/88 (34%), Positives = 52/88 (59%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ +P K+++ + LR++AH GASL+F S + L+K R ++N AF + ++ D
Sbjct: 192 QDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKM-RGVINQLAFGIDKSKSMCVD 250
Query: 365 YNKPIFVPFGTDSVASIEGTTQYVTADI 392
NKP+F+ G DS+ I G+ +DI
Sbjct: 251 QNKPLFITAGLDSLCQI-GSPPVPDSDI 277
>UNIPROTKB|Q8TCX1 [details] [associations]
symbol:DYNC2LI1 "Cytoplasmic dynein 2 light intermediate
chain 1" species:9606 "Homo sapiens" [GO:0003774 "motor activity"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0019886 "antigen processing
and presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0045177 "apical part of cell" evidence=ISS]
[GO:0072372 "primary cilium" evidence=ISS] [GO:0005881 "cytoplasmic
microtubule" evidence=ISS] [GO:0030990 "intraflagellar transport
particle" evidence=ISS] [GO:0031512 "motile primary cilium"
evidence=ISS] [GO:0035085 "cilium axoneme" evidence=ISS]
[GO:0005858 "axonemal dynein complex" evidence=ISS] [GO:0005932
"microtubule basal body" evidence=ISS] GO:GO:0005829
Reactome:REACT_6900 EMBL:CH471053 GO:GO:0019886 GO:GO:0045177
GO:GO:0007368 GO:GO:0042384 GO:GO:0005874 GO:GO:0035085
GO:GO:0003774 InterPro:IPR022780 Pfam:PF05783 CTD:51626
eggNOG:NOG256387 HOVERGEN:HBG066237 KO:K10417 OMA:VICKTLR
OrthoDB:EOG4W0XDP GO:GO:0030990 GO:GO:0031512 GO:GO:0005858
EMBL:AY083346 EMBL:AF151818 EMBL:AK223432 EMBL:AC011242
EMBL:BC006969 EMBL:BC016324 EMBL:BC040558 EMBL:BC058823
EMBL:AL050006 IPI:IPI00059632 IPI:IPI00217241 IPI:IPI00465426
IPI:IPI00554555 IPI:IPI00885209 PIR:T08695 RefSeq:NP_001180393.1
RefSeq:NP_056337.1 RefSeq:NP_057092.2 UniGene:Hs.371597
ProteinModelPortal:Q8TCX1 SMR:Q8TCX1 STRING:Q8TCX1
PhosphoSite:Q8TCX1 DMDM:74715850 PRIDE:Q8TCX1 DNASU:51626
Ensembl:ENST00000260605 Ensembl:ENST00000398823
Ensembl:ENST00000406852 GeneID:51626 KEGG:hsa:51626 UCSC:uc002rth.3
UCSC:uc002rti.3 UCSC:uc002rtk.3 UCSC:uc002rtl.3 UCSC:uc021vgq.1
GeneCards:GC02P043913 HGNC:HGNC:24595 neXtProt:NX_Q8TCX1
PharmGKB:PA142671919 InParanoid:Q8TCX1 PhylomeDB:Q8TCX1
ChiTaRS:DYNC2LI1 GenomeRNAi:51626 NextBio:55545 ArrayExpress:Q8TCX1
Bgee:Q8TCX1 CleanEx:HS_DYNC2LI1 Genevestigator:Q8TCX1
Uniprot:Q8TCX1
Length = 351
Score = 417 (151.9 bits), Expect = 4.6e-38, P = 4.6e-38
Identities = 95/241 (39%), Positives = 146/241 (60%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+ + IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G KDI H WELG G
Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGG 90
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA--------IFES 145
TS L++ S+ + T ++ F+LVL+LDLS+ N LW E L ++ + ++
Sbjct: 91 TSLLDLISIPITGD-TLRT-FSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKT 148
Query: 146 N-ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
N ++V E R + D H D LI FPVPL++IG KYD+F++ E K+++ + LR
Sbjct: 149 NAKAVSEMRQKIWNNMPKD-HPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLR 207
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
++AH GASL+F S + L+K R ++N AF + ++ D NKP+F+ G DS
Sbjct: 208 FVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQ 266
Query: 265 I 265
I
Sbjct: 267 I 267
Score = 255 (94.8 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 60/172 (34%), Positives = 93/172 (54%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+K
Sbjct: 170 DHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK 229
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
R ++N AF + ++ D NKP+F+ G DS I + S ++
Sbjct: 230 -IRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 288
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK +L+Q +R
Sbjct: 289 WKKVYEKLF--PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKR 338
Score = 239 (89.2 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 65/192 (33%), Positives = 99/192 (51%)
Query: 422 FTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRT 481
F+LVL+LDLS+ N LW E L +A + V K G + + E R K +
Sbjct: 109 FSLVLVLDLSKPNDLWPTMENLL---QATKSHVDKVIMKLGK-TNAKAVSEMRQK-IWNN 163
Query: 482 FPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVN 541
P D LI FPVPL++IG KYD+F++ E K+++ + LR++AH
Sbjct: 164 MPKD----------HPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYY 213
Query: 542 GASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQ 601
GASL+F S + L+K R ++N AF + ++ D NKP+F+ G DS I G+
Sbjct: 214 GASLMFTSKSEALLLK-IRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQI-GSPP 271
Query: 602 YVTADTEVGRKH 613
+ ++G+ H
Sbjct: 272 --VPENDIGKLH 281
Score = 178 (67.7 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 47/117 (40%), Positives = 68/117 (58%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRA- 449
DI H WELG GTS L++ S+ + T ++ F+LVL+LDLS+ N LW E L ++
Sbjct: 80 DIAHFWELGGGTSLLDLISIPITGD-TLRT-FSLVLVLDLSKPNDLWPTMENLLQATKSH 137
Query: 450 -------IFESN-ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFED 498
+ ++N ++V E R + D H D LI FPVPL++IG KYD+F+D
Sbjct: 138 VDKVIMKLGKTNAKAVSEMRQKIWNNMPKD-HPDHELIDPFPVPLVIIGSKYDVFQD 193
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+K R ++N AF + ++ D
Sbjct: 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKSKSICVD 250
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS I
Sbjct: 251 QNKPLFITAGLDSFGQI 267
>UNIPROTKB|E2R699 [details] [associations]
symbol:DYNC2LI1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005881 "cytoplasmic microtubule"
evidence=IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0072372 "primary cilium" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0035085 "cilium axoneme" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0030990
"intraflagellar transport particle" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] GO:GO:0045177
GO:GO:0007368 GO:GO:0072372 GO:GO:0042384 GO:GO:0035085
InterPro:IPR022780 Pfam:PF05783 CTD:51626
GeneTree:ENSGT00390000010498 KO:K10417 OMA:VICKTLR GO:GO:0030990
GO:GO:0031512 EMBL:AAEX03007472 RefSeq:XP_851613.1
Ensembl:ENSCAFT00000003941 GeneID:474570 KEGG:cfa:474570
NextBio:20850560 Uniprot:E2R699
Length = 348
Score = 416 (151.5 bits), Expect = 6.0e-38, P = 6.0e-38
Identities = 90/242 (37%), Positives = 148/242 (61%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKS-GKTVMKDICHLWELGSG 93
E+++ IG+K+ GK+T++ R L++++ PKPTLALEY Y R++ G + KDI H WELG G
Sbjct: 28 EKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGG 87
Query: 94 TSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFE-------- 144
TS L++ S+ +S +L F++VL+LDLS+ N LW E L ++ +
Sbjct: 88 TSLLDLISIPITSDNLRT---FSIVLVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGK 144
Query: 145 -SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCL 203
++++V E R D H D+ L+ F +PL++IG KYD+F++ + K+++ + L
Sbjct: 145 TNSKAVSEMRQKIWSNMQKD-HPDRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTL 203
Query: 204 RYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVA 263
R++AH GASL+F S + L+K R ++N AF + ++ D NKP+F+ G DS++
Sbjct: 204 RFVAHYYGASLMFTSKSEALLLK-VRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLS 262
Query: 264 SI 265
I
Sbjct: 263 QI 264
Score = 258 (95.9 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 57/172 (33%), Positives = 96/172 (55%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D+ L+ F +PL++IG KYD+F++ + K+++ + LR++AH GASL+F S + L+K
Sbjct: 167 DRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK 226
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
R ++N AF + ++ D NKP+F+ G DS++ I + S +D
Sbjct: 227 -VRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDL 285
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK ++L+Q +R
Sbjct: 286 WKKVYERVF--PPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKR 335
Score = 229 (85.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 61/192 (31%), Positives = 102/192 (53%)
Query: 422 FTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRT 481
F++VL+LDLS+ N LW E L +A + + K G + + E R K
Sbjct: 106 FSIVLVLDLSKPNDLWPTMENLL---QATKSHVDKMIMKLGK-TNSKAVSEMRQK----- 156
Query: 482 FPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVN 541
I + D D+ L+ F +PL++IG KYD+F++ + K+++ + LR++AH
Sbjct: 157 -----IWSNMQKD-HPDRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYY 210
Query: 542 GASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQ 601
GASL+F S + L+K R ++N AF + ++ D NKP+F+ G DS++ I G+
Sbjct: 211 GASLMFTSKSEALLLK-VRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQI-GSPP 268
Query: 602 YVTADTEVGRKH 613
D ++G+ H
Sbjct: 269 I--PDNDIGKLH 278
Score = 171 (65.3 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 43/121 (35%), Positives = 67/121 (55%)
Query: 388 VTADICHLWELGSGTSRLEVASL-FSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAK 446
+ DI H WELG GTS L++ S+ +S +L F++VL+LDLS+ N LW E L
Sbjct: 74 IPKDIAHFWELGGGTSLLDLISIPITSDNLRT---FSIVLVLDLSKPNDLWPTMENLLQA 130
Query: 447 FRAIFE---------SNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFE 497
++ + ++++V E R D H D+ L+ F +PL++IG KYD+F+
Sbjct: 131 TKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKD-HPDRELVDPFLIPLVIIGSKYDIFQ 189
Query: 498 D 498
D
Sbjct: 190 D 190
Score = 131 (51.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ + K+++ + LR++AH GASL+F S + L+K R ++N AF + ++ D
Sbjct: 189 QDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-VRGVINQLAFGIDKSKSICVD 247
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS++ I
Sbjct: 248 QNKPLFITAGLDSLSQI 264
>UNIPROTKB|F1NGV6 [details] [associations]
symbol:DYNC2LI1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0030990 "intraflagellar transport particle"
evidence=IEA] [GO:0031512 "motile primary cilium" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0045177 "apical part of cell"
evidence=IEA] GO:GO:0045177 GO:GO:0035085 InterPro:IPR022780
Pfam:PF05783 GeneTree:ENSGT00390000010498 OMA:VICKTLR GO:GO:0030990
GO:GO:0031512 EMBL:AADN02012008 IPI:IPI00584217
Ensembl:ENSGALT00000016181 Uniprot:F1NGV6
Length = 353
Score = 410 (149.4 bits), Expect = 2.6e-37, P = 2.6e-37
Identities = 91/252 (36%), Positives = 146/252 (57%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGK-TVMKDICHLWELGSG 93
E+++L +G+K+ GK+T++ R LE+ + PKPTL LEY + R++ + KDI H WE+G G
Sbjct: 32 EKSVLFMGSKNGGKTTIILRCLEREEVPKPTLVLEYTFGRRARRHNAPKDIAHFWEIGGG 91
Query: 94 TSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA-------KFRAIFESN 146
TS LE+ + ++ F +VL+LDLS+ N LW E L K A E
Sbjct: 92 TSLLELIRI--PITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKT 149
Query: 147 --ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLR 204
E E + ++ D H D L+ FP+PL++IG KYD+F + ++I + LR
Sbjct: 150 DPEVAAEIKQKMQNNLQRD-HPDYDLVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLR 208
Query: 205 YLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVAS 264
+++H GASL+F S + L+K R ++NH AF + +V+ D++KP+F+P G DS++
Sbjct: 209 FVSHYYGASLVFTSKSEALLLK-ARALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQ 267
Query: 265 IEGTTHGKDASL 276
I G D+++
Sbjct: 268 I-GPPPTSDSNI 278
Score = 253 (94.1 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 57/172 (33%), Positives = 98/172 (56%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D L+ FP+PL++IG KYD+F + ++I + LR+++H GASL+F S + L+K
Sbjct: 171 DYDLVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRFVSHYYGASLVFTSKSEALLLK 230
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI-EGTTQYVTAG---STSSLDK 826
R ++NH AF + +V+ D++KP+F+P G DS++ I T G + + L+
Sbjct: 231 -ARALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQIGPPPTSDSNIGKMRANTPLEL 289
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K +F F S + + + DPA Y+E +D +R QK ++ +Q +R
Sbjct: 290 WKKVFEKTF--PPRSFSDLQDSKDPAQVSQYAEYEVDVMRAQKNQEFEQYKR 339
Score = 239 (89.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 64/195 (32%), Positives = 99/195 (50%)
Query: 422 FTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNESVREKRGSFEHFRTADEHRDKGLIRT 481
F +VL+LDLS+ N LW E L R + EK E + L R
Sbjct: 110 FAVVLVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKTDP-EVAAEIKQKMQNNLQRD 168
Query: 482 FPVPLILIGGKYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVN 541
P YDL + FP+PL++IG KYD+F + ++I + LR+++H
Sbjct: 169 HP--------DYDLVDP------FPIPLVIIGSKYDIFHEFDSEMRKIISRTLRFVSHYY 214
Query: 542 GASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQ 601
GASL+F S + L+K R ++NH AF + +V+ D++KP+F+P G DS++ I G
Sbjct: 215 GASLVFTSKSEALLLK-ARALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQI-GPPP 272
Query: 602 YVTADTEVGRKHLTT 616
T+D+ +G+ T
Sbjct: 273 --TSDSNIGKMRANT 285
Score = 165 (63.1 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 42/117 (35%), Positives = 59/117 (50%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLA----- 445
DI H WE+G GTS LE+ + ++ F +VL+LDLS+ N LW E L
Sbjct: 81 DIAHFWEIGGGTSLLELIRI--PITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNH 138
Query: 446 --KFRAIFESN--ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFED 498
K A E E E + ++ D H D L+ FP+PL++IG KYD+F +
Sbjct: 139 VNKILAKLEKTDPEVAAEIKQKMQNNLQRD-HPDYDLVDPFPIPLVIIGSKYDIFHE 194
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/70 (38%), Positives = 47/70 (67%)
Query: 312 KRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFV 371
++I + LR+++H GASL+F S + L+K R ++NH AF + +V+ D++KP+F+
Sbjct: 200 RKIISRTLRFVSHYYGASLVFTSKSEALLLK-ARALINHLAFGYDRSKSVSVDHSKPLFI 258
Query: 372 PFGTDSVASI 381
P G DS++ I
Sbjct: 259 PAGLDSLSQI 268
>WB|WBGene00006960 [details] [associations]
symbol:xbx-1 species:6239 "Caenorhabditis elegans"
[GO:0031513 "nonmotile primary cilium" evidence=IDA] [GO:0035085
"cilium axoneme" evidence=IDA] GO:GO:0035085 GO:GO:0031513
InterPro:IPR022780 Pfam:PF05783 eggNOG:NOG256387
GeneTree:ENSGT00390000010498 KO:K10417 OMA:VICKTLR EMBL:Z78411
PIR:T20505 RefSeq:NP_506683.2 UniGene:Cel.4257
ProteinModelPortal:Q19119 SMR:Q19119 STRING:Q19119
EnsemblMetazoa:F02D8.3 GeneID:184080 KEGG:cel:CELE_F02D8.3
UCSC:F02D8.3 CTD:184080 WormBase:F02D8.3 HOGENOM:HOG000019504
InParanoid:Q19119 NextBio:923448 Uniprot:Q19119
Length = 370
Score = 325 (119.5 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 77/236 (32%), Positives = 127/236 (53%)
Query: 35 ERTLLLIGTKSVGKSTLVFRFLEKNDTPKPTLALEYIYARKSGKTVMKDICHLWELGSGT 94
E ++ G + GKS+ + FLE+ + K ++ LEY YAR++ V KDI +LWELG G
Sbjct: 45 ESHIIFAGNRKSGKSSFMLNFLERKEDLKDSVGLEYTYARRTRGNV-KDIANLWELGGGA 103
Query: 95 SRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAIFESNE--SVREK 152
+ E+ S+ ++ +L+L+LD++ L+ +W E + R + E+ E + +
Sbjct: 104 TVTELLSV--PITMKNVEICSLILLLDMTNLDEMWITIEKTVDSVRRLVENLERQDINLQ 161
Query: 153 RGSFEHFRTADEHRDKGLIRTF---PVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHV 209
E R E D G ++ P+P+ ++ KYD F+N E K+R Q LR+LA+
Sbjct: 162 TRLAEKMRLRLEKYDDGSLKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYS 221
Query: 210 NGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
GA+L+ SS K +++ +H+AF + D+NKP+FV G DS+ SI
Sbjct: 222 YGANLMMFSSRMEQFPKLVKNMTSHFAFGTVCPQGYMTDHNKPMFVKCGFDSLESI 277
Score = 203 (76.5 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 66/225 (29%), Positives = 110/225 (48%)
Query: 662 WIIKILKWVVSSRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 721
WI I K V S R E+ D + L + L KYD K + P+P
Sbjct: 136 WIT-IEKTVDSVRRLVENLERQDINLQTRLAEKMRLRL----EKYDDGSLK-MCNPCPIP 189
Query: 722 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAF 781
+ ++ KYD F+N E K+R Q LR+LA+ GA+L+ SS K +++ +H+AF
Sbjct: 190 VTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPKLVKNMTSHFAF 249
Query: 782 SSHLASAVNFDYNKPIFVPFGTDSVASI---EGTTQYVTAGSTSSLDKYKHIFTTHFLQD 838
+ D+NKP+FV G DS+ SI + ++ G++S + ++ F + + Q
Sbjct: 250 GTVCPQGYMTDHNKPMFVKCGFDSLESIGIPPASDNFM--GASSPFNLWRESFISLWPQK 307
Query: 839 DPSQN-KSKSAPDPALDQNYSEPVIDSLRNQKLEQL-DQMRREVD 881
+ + + DP +D + EP ID+L K ++L + +R + D
Sbjct: 308 TGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSKRD 352
Score = 173 (66.0 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 39/105 (37%), Positives = 59/105 (56%)
Query: 492 KYDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSL 551
KYD K + P+P+ ++ KYD F+N E K+R Q LR+LA+ GA+L+ SS
Sbjct: 174 KYDDGSLK-MCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSR 232
Query: 552 DPGLVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 596
K +++ +H+AF + D+NKP+FV G DS+ SI
Sbjct: 233 MEQFPKLVKNMTSHFAFGTVCPQGYMTDHNKPMFVKCGFDSLESI 277
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
+N E K+R Q LR+LA+ GA+L+ SS K +++ +H+AF + D
Sbjct: 201 QNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPKLVKNMTSHFAFGTVCPQGYMTD 260
Query: 365 YNKPIFVPFGTDSVASI 381
+NKP+FV G DS+ SI
Sbjct: 261 HNKPMFVKCGFDSLESI 277
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFTLVLMLDLSRLNSLWTEAETFLAKFRAI 450
DI +LWELG G + E+ S+ ++ +L+L+LD++ L+ +W E + R +
Sbjct: 92 DIANLWELGGGATVTELLSV--PITMKNVEICSLILLLDMTNLDEMWITIEKTVDSVRRL 149
Query: 451 FESNE--SVREKRGSFEHFRTADEHRDKGLIRTF---PVPLILIGGKYDLFED 498
E+ E + + E R E D G ++ P+P+ ++ KYD F++
Sbjct: 150 VENLERQDINLQTRLAEKMRLRLEKYDDGSLKMCNPCPIPVTIVASKYDEFQN 202
>UNIPROTKB|F8W853 [details] [associations]
symbol:DYNC2LI1 "Cytoplasmic dynein 2 light intermediate
chain 1" species:9606 "Homo sapiens" [GO:0007368 "determination of
left/right symmetry" evidence=IEA] [GO:0030990 "intraflagellar
transport particle" evidence=IEA] [GO:0031512 "motile primary
cilium" evidence=IEA] [GO:0035085 "cilium axoneme" evidence=IEA]
[GO:0042384 "cilium assembly" evidence=IEA] [GO:0045177 "apical
part of cell" evidence=IEA] GO:GO:0045177 GO:GO:0007368
GO:GO:0042384 GO:GO:0035085 GO:GO:0030990 GO:GO:0031512
EMBL:AC011242 HGNC:HGNC:24595 ChiTaRS:DYNC2LI1 IPI:IPI01010693
Ensembl:ENST00000443170 ArrayExpress:F8W853 Bgee:F8W853
Uniprot:F8W853
Length = 225
Score = 255 (94.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 60/172 (34%), Positives = 93/172 (54%)
Query: 711 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 770
D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+K
Sbjct: 44 DHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK 103
Query: 771 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGT----TQYVTAGSTSSLDK 826
R ++N AF + ++ D NKP+F+ G DS I + S ++
Sbjct: 104 -IRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMEL 162
Query: 827 YKHIFTTHFLQDDPSQNKSKSAPDPALDQNYSEPVIDSLRNQKLEQLDQMRR 878
+K ++ F S N K DPA D Y+E +D +R QK +L+Q +R
Sbjct: 163 WKKVYEKLF--PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKR 212
Score = 215 (80.7 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 42/102 (41%), Positives = 64/102 (62%)
Query: 164 EHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPG 223
+H D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S +
Sbjct: 41 DHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEAL 100
Query: 224 LVKRTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASI 265
L+K R ++N AF + ++ D NKP+F+ G DS I
Sbjct: 101 LLK-IRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQI 141
Score = 212 (79.7 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 44/116 (37%), Positives = 70/116 (60%)
Query: 498 DKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVK 557
D LI FPVPL++IG KYD+F++ E K+++ + LR++AH GASL+F S + L+K
Sbjct: 44 DHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK 103
Query: 558 RTRDILNHYAFSSHLASAVNFDYNKPIFVPFGTDSVASIEGTTQYVTADTEVGRKH 613
R ++N AF + ++ D NKP+F+ G DS I G+ + ++G+ H
Sbjct: 104 -IRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQI-GSPP--VPENDIGKLH 155
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 305 RNLEPNKKRIAVQCLRYLAHVNGASLLFHSSLDPGLVKRTRDILNHYAFSSHLASAVNFD 364
++ E K+++ + LR++AH GASL+F S + L+K R ++N AF + ++ D
Sbjct: 66 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKSKSICVD 124
Query: 365 YNKPIFVPFGTDSVASI 381
NKP+F+ G DS I
Sbjct: 125 QNKPLFITAGLDSFGQI 141
>UNIPROTKB|Q7XA07 [details] [associations]
symbol:D1BLIC "Cytoplasmic dynein 2 light intermediate
chain 1" species:3055 "Chlamydomonas reinhardtii" [GO:0005515
"protein binding" evidence=IPI] [GO:0005858 "axonemal dynein
complex" evidence=IDA] [GO:0030286 "dynein complex" evidence=IDA]
[GO:0031514 "motile cilium" evidence=IDA] [GO:0035085 "cilium
axoneme" evidence=IDA] [GO:0043064 "flagellum organization"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
InterPro:IPR013684 Pfam:PF08477 GO:GO:0005525 GO:GO:0007275
GO:GO:0007264 GO:GO:0005929 GO:GO:0005932 GO:GO:0005874
GO:GO:0003774 GO:GO:0035086 GO:GO:0020017 eggNOG:NOG256387
KO:K10417 EMBL:AF547995 EMBL:AY157841 EMBL:AY616759 EMBL:DS496130
RefSeq:XP_001694720.1 UniGene:Cre.7581 ProteinModelPortal:Q7XA07
STRING:Q7XA07 PRIDE:Q7XA07 EnsemblPlants:EDP02304 GeneID:5720382
KEGG:cre:CHLREDRAFT_130394 OMA:ANIWELA ProtClustDB:CLSN2703119
GO:GO:0005858 GO:GO:0043064 Uniprot:Q7XA07
Length = 427
Score = 237 (88.5 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 82/273 (30%), Positives = 127/273 (46%)
Query: 41 IGTKSVGKSTLVFRFL--EKNDTPKPTLALEYIYARKSGKT--VMKDICHLWELGSGTSR 96
+G+++ GKSTL+ RFL + + PKP+ +EY YARK KD+ H+WE+G
Sbjct: 46 VGSRAAGKSTLLNRFLYPTRAEVPKPSEGIEYTYARKPAAFDHEKKDLAHIWEVGGSQEF 105
Query: 97 LEVASLFSSFSLTAQSGFT--LVLMLDLSR----LNSL--WTE-AETFLAKFRAIFESN- 146
E LTA+ T +V+++DLS L +L W E + L FE
Sbjct: 106 AEEIVNSDQLFLTAKQVTTAVVVIVVDLSDPAGVLPTLLYWVEQVKKKLGSTYEKFEKKG 165
Query: 147 ----ESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQC 202
E +R++ S +A+E DK + + L++ KYD F+N +P K++ +
Sbjct: 166 LQLPEQLRQRAKS--KLYSANE--DKDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRV 221
Query: 203 LRYLAHVNGASLLFHSSL----------DPGLVKRTRDILNHYAFSSHLASAV-----NF 247
LRY+AH +GA L + S L D L+ ++NH F+ V
Sbjct: 222 LRYIAHAHGAFLCYLSGLHGASEGSGAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQI 281
Query: 248 DYNKPIFVPFGTDSVASIEGTTHGKDASLESGG 280
D+ PI VP G D+ S+ G + +GG
Sbjct: 282 DHTGPIMVPAGFDTFKSV-GRPRSQGEGTVAGG 313
Score = 172 (65.6 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 51/191 (26%), Positives = 87/191 (45%)
Query: 706 YDLFEDKGLIRTFPVPLILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSL- 764
Y EDK + + L++ KYD F+N +P K++ + LRY+AH +GA L + S L
Sbjct: 181 YSANEDKDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLH 240
Query: 765 ---------DPGLVKRTRDILNHYAFSSHLASAV-----NFDYNKPIFVPFGTDSVASIE 810
D L+ ++NH F+ V D+ PI VP G D+ S+
Sbjct: 241 GASEGSGAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSV- 299
Query: 811 GTTQYVTAGSTSS-LDKYKHIFTTHFLQDDPSQNK-SKSAPDPALDQNYSEPVIDSLRNQ 868
G + G+ + L +++ +F F + K S + + Y E +D++R +
Sbjct: 300 GRPRSQGEGTVAGGLAEWRELFEKMFPGVREKEAKMSAKGAKFVIPEQYKEEEVDAVRQR 359
Query: 869 KLEQLDQMRRE 879
K+ L+ R+E
Sbjct: 360 KVTDLENFRKE 370
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 61/223 (27%), Positives = 94/223 (42%)
Query: 391 DICHLWELGSGTSRLEVASLFSSFSLTAQSGFT--LVLMLDLSRLNSLWTEAETFLAKFR 448
D+ H+WE+G E LTA+ T +V+++DLS + T L
Sbjct: 92 DLAHIWEVGGSQEFAEEIVNSDQLFLTAKQVTTAVVVIVVDLSDPAGV---LPTLLYWV- 147
Query: 449 AIFESNESVREKRGSFEHFRTADEHRDKGLIRTFPVPLILIGGKYDLFEDKGLIRTFPVP 508
E V++K GS T ++ KGL + Y EDK + +
Sbjct: 148 ------EQVKKKLGS-----TYEKFEKKGLQLPEQLRQRAKSKLYSANEDKDTVYHSGIS 196
Query: 509 LILIGGKYDLFENLEPNKKRIAVQCLRYLAHVNGASLLFHSSL----------DPGLVKR 558
L++ KYD F+N +P K++ + LRY+AH +GA L + S L D L+
Sbjct: 197 LVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHGASEGSGAEDAALLDN 256
Query: 559 TRDILNHYAFSSHLASAV-----NFDYNKPIFVPFGTDSVASI 596
++NH F+ V D+ PI VP G D+ S+
Sbjct: 257 FTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSV 299
Score = 39 (18.8 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 702 IGGKYDLFEDKGL 714
+G Y+ FE KGL
Sbjct: 154 LGSTYEKFEKKGL 166
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 890 890 0.00087 122 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 615 (65 KB)
Total size of DFA: 398 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 71.65u 0.15s 71.80t Elapsed: 00:00:07
Total cpu time: 71.66u 0.15s 71.81t Elapsed: 00:00:07
Start: Thu Aug 15 11:06:52 2013 End: Thu Aug 15 11:06:59 2013