BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1165
(461 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q60698|SKI_MOUSE Ski oncogene OS=Mus musculus GN=Ski PE=2 SV=2
Length = 725
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/293 (50%), Positives = 183/293 (62%), Gaps = 30/293 (10%)
Query: 12 NPHLKKVLKTYQLSAVKSLQGPSTVLRTEGVVTVTLVPKKEPADSAEPSPEPYITPPPPP 71
P L+K L+ + LS++ SL GP+ V R G KE + P+P P PPP
Sbjct: 13 QPGLQKTLEQFHLSSMSSLGGPA-VSRRAGQEAYKKESAKEAGAATVPAPVPTAAEPPP- 70
Query: 72 IQQLPILTT------------SDQSRSELSETLLEGETISCFVVGGEKRLCLPQILNSVL 119
+ LP + SD+S +E ET+LEGETISCFVVGGEKRLCLPQILNSVL
Sbjct: 71 VLHLPAIQPPPPVLPGPFFMPSDRS-TERCETVLEGETISCFVVGGEKRLCLPQILNSVL 129
Query: 120 RDFSLPQINQVCDDLQIFCSRCNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLH 179
RDFSL QIN VCD+L I+CSRC +QLEILK+ GILP +A SCGL+TKTDAERLC+ LL+
Sbjct: 130 RDFSLQQINSVCDELHIYCSRCTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLY 189
Query: 180 QRPGPTPRHIDKIVTF---------SFKVYHECFGKCKGVCMPELFTDGESRCIQCLECH 230
P P + + S +VYHECFGKCKG+ +PEL++ + CIQCL+C
Sbjct: 190 GGAYPPPCKKELAASLALGLELSERSVRVYHECFGKCKGLLVPELYSSPSAACIQCLDCR 249
Query: 231 GFFSPQKFVCHVHLSSENRTCHWGFESVKWRSYLL------AVEEQQNYDQCL 277
+ P KFV H H + ENRTCHWGF+S WR+Y+L EEQ +CL
Sbjct: 250 LMYPPHKFVVHSHKALENRTCHWGFDSANWRAYILLSQDYTGKEEQARLGRCL 302
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 96/152 (63%), Gaps = 15/152 (9%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHIDKIVTF----- 358
C +QLEILK+ GILP +A SCGL+TKTDAERLC+ LL+ P P + +
Sbjct: 151 CTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLYGGAYPPPCKKELAASLALGLE 210
Query: 359 ----SFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTC 414
S +VYHECFGKCKG+ +PEL++ + CIQCL+C + P KFV H H + ENRTC
Sbjct: 211 LSERSVRVYHECFGKCKGLLVPELYSSPSAACIQCLDCRLMYPPHKFVVHSHKALENRTC 270
Query: 415 HWGFESVKWRSYLL------AVEEQQNYDQCL 440
HWGF+S WR+Y+L EEQ +CL
Sbjct: 271 HWGFDSANWRAYILLSQDYTGKEEQARLGRCL 302
>sp|Q02225|SKI_XENLA Ski oncogene OS=Xenopus laevis GN=ski PE=2 SV=1
Length = 717
Score = 271 bits (694), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 159/328 (48%), Positives = 204/328 (62%), Gaps = 38/328 (11%)
Query: 2 METIGQQPAYNPH--LKKVLKTYQLSAVKSLQGPSTVLRTEGVVTVTLVPK---KEPADS 56
MET+ + ++ PH L+K L+ + LS++ SL GP+ T L K KEP
Sbjct: 1 METVSRS-SFQPHAGLQKTLEQFHLSSMSSLGGPAAF---SARWTQDLYKKECGKEP--- 53
Query: 57 AEPSPEPYI---TPPPPPIQQLPILTTSDQSRSELSETLLEGETISCFVVGGEKRLCLPQ 113
PEP + + PPP I P+ SD+S +E ET+LEGETISCFVVGGEKRLCLPQ
Sbjct: 54 ----PEPILHLPSQPPPVIPGGPLFMPSDRS-TERCETILEGETISCFVVGGEKRLCLPQ 108
Query: 114 ILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQLEILKLSGILPLTAASCGLMTKTDAERL 173
ILNSVLRDFSL QIN VCD+L ++CSRC +QLEILK+ GILP +A SCGL+TKTDAERL
Sbjct: 109 ILNSVLRDFSLQQINAVCDELHVYCSRCTADQLEILKVMGILPFSAPSCGLITKTDAERL 168
Query: 174 CSTLLHQRPGPTPRHIDK-----------IVTFSFKVYHECFGKCKGVCMPELFTDGESR 222
C+ L++ P PR K + SFKVYHECFGKC+G+ +PEL+ +
Sbjct: 169 CNALMYGGSYP-PRCAKKSDFPPGPLELELTEGSFKVYHECFGKCRGLFVPELYGHPSAP 227
Query: 223 CIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVKWRSYLLAVEEQQNYDQCL----K 278
CIQCL+C + P KFV H H + ENRTCHWGF+S WR+Y+L + D L +
Sbjct: 228 CIQCLDCRLMYPPHKFVVHSHKALENRTCHWGFDSANWRAYILLARDGVGGDDELARLGR 287
Query: 279 ILQIFKEQHIETTTSGKRKQTHRLPCNP 306
+L+ KE+ + + KRK RL P
Sbjct: 288 LLEEIKEK-FDYSNKYKRKAA-RLSSEP 313
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 106/172 (61%), Gaps = 17/172 (9%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHIDK--------- 354
C +QLEILK+ GILP +A SCGL+TKTDAERLC+ L++ P PR K
Sbjct: 136 CTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALMYGGSYP-PRCAKKSDFPPGPLE 194
Query: 355 --IVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENR 412
+ SFKVYHECFGKC+G+ +PEL+ + CIQCL+C + P KFV H H + ENR
Sbjct: 195 LELTEGSFKVYHECFGKCRGLFVPELYGHPSAPCIQCLDCRLMYPPHKFVVHSHKALENR 254
Query: 413 TCHWGFESVKWRSYLLAVEEQQNYDQCL----KILQIFKEQHIETTTSGKRK 460
TCHWGF+S WR+Y+L + D L ++L+ KE+ + + KRK
Sbjct: 255 TCHWGFDSANWRAYILLARDGVGGDDELARLGRLLEEIKEK-FDYSNKYKRK 305
>sp|P49140|SKI_CHICK Ski oncogene OS=Gallus gallus GN=SKI PE=3 SV=1
Length = 750
Score = 271 bits (694), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/317 (48%), Positives = 200/317 (63%), Gaps = 21/317 (6%)
Query: 2 METIGQQPAYNPH--LKKVLKTYQLSAVKSLQGPSTVLRTEGVVTVTLVPKKEPADSAEP 59
MET+ + ++ PH L+K L+ + LS++ SL GP+ + K D AEP
Sbjct: 1 METVSRS-SFQPHPGLQKTLEQFHLSSMSSLGGPAAF---SARWAQEMYKKDNGKDPAEP 56
Query: 60 SPEPYITPPPPPIQQLPILTTSDQSRSELSETLLEGETISCFVVGGEKRLCLPQILNSVL 119
PPP+ P SD+S +E ET+LEGETISCFVVGGEKRLCLPQILNSVL
Sbjct: 57 VLH-LPPIQPPPVMPGPFFMPSDRS-TERCETILEGETISCFVVGGEKRLCLPQILNSVL 114
Query: 120 RDFSLPQINQVCDDLQIFCSRCNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLH 179
RDFSL QIN VCD+L I+CSRC +QLEILK+ GILP +A SCGL+TKTDAERLC+ LL+
Sbjct: 115 RDFSLQQINSVCDELHIYCSRCTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLY 174
Query: 180 QRPGPTPRHIDK---------IVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECH 230
G P H K + SFKVYHECFGKCKG+ +PEL+++ + CIQCL+C
Sbjct: 175 G--GTYPPHCKKEFSSTIELELTEKSFKVYHECFGKCKGLLVPELYSNPSAACIQCLDCR 232
Query: 231 GFFSPQKFVCHVHLSSENRTCHWGFESVKWRSYLLAVEEQQNYDQCLKILQIFKEQHIET 290
+ P KFV H H S ENRTCHWGF+S WRSY+L ++ ++ ++ Q+ E +
Sbjct: 233 LMYPPHKFVVHSHKSLENRTCHWGFDSANWRSYILLSQDYTGKEEKARLGQLLDEMKEKF 292
Query: 291 TTSGKRKQTHRLPCNPE 307
+ K K+ + P N E
Sbjct: 293 DYNNKYKR--KAPRNRE 307
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 107/168 (63%), Gaps = 13/168 (7%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHIDK--------- 354
C +QLEILK+ GILP +A SCGL+TKTDAERLC+ LL+ G P H K
Sbjct: 136 CTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLYG--GTYPPHCKKEFSSTIELE 193
Query: 355 IVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTC 414
+ SFKVYHECFGKCKG+ +PEL+++ + CIQCL+C + P KFV H H S ENRTC
Sbjct: 194 LTEKSFKVYHECFGKCKGLLVPELYSNPSAACIQCLDCRLMYPPHKFVVHSHKSLENRTC 253
Query: 415 HWGFESVKWRSYLLAVEEQQNYDQCLKILQIFKE--QHIETTTSGKRK 460
HWGF+S WRSY+L ++ ++ ++ Q+ E + + KRK
Sbjct: 254 HWGFDSANWRSYILLSQDYTGKEEKARLGQLLDEMKEKFDYNNKYKRK 301
>sp|P12755|SKI_HUMAN Ski oncogene OS=Homo sapiens GN=SKI PE=1 SV=1
Length = 728
Score = 262 bits (669), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 187/306 (61%), Gaps = 31/306 (10%)
Query: 1 MMETIGQQPAYNPH--LKKVLKTYQLSAVKSLQGPSTVLRTEGVVTVTLVPKKEPADSAE 58
M G + + PH L+K L+ + LS++ SL GP+ KE +A
Sbjct: 1 MEAAAGGRGCFQPHPGLQKTLEQFHLSSMSSLGGPAAFSARWAQEAYKKESAKEAGAAAV 60
Query: 59 PSPEPYITPPPPPIQQLPILTT------------SDQSRSELSETLLEGETISCFVVGGE 106
P+P P T PPP + LP + SD+S +E ET+LEGETISCFVVGGE
Sbjct: 61 PAPVPAATEPPP-VLHLPAIQPPPPVLPGPFFMPSDRS-TERCETVLEGETISCFVVGGE 118
Query: 107 KRLCLPQILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQLEILKLSGILPLTAASCGLMT 166
KRLCLPQILNSVLRDFSL QIN VCD+L I+CSRC +QLEILK+ GILP +A SCGL+T
Sbjct: 119 KRLCLPQILNSVLRDFSLQQINAVCDELHIYCSRCTADQLEILKVMGILPFSAPSCGLIT 178
Query: 167 KTDAERLCSTLLHQRPGPTPRHIDKIVTF---------SFKVYHECFGKCKGVCMPELFT 217
KTDAERLC+ LL+ P P + + S +VYHECFGKCKG+ +PEL++
Sbjct: 179 KTDAERLCNALLYGGAYPPPCKKELAASLALGLELSERSVRVYHECFGKCKGLLVPELYS 238
Query: 218 DGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVKWRSYLL------AVEEQQ 271
+ CIQCL+C + P KFV H H + ENRTCHWGF+S WR+Y+L EEQ
Sbjct: 239 SPSAACIQCLDCRLMYPPHKFVVHSHKALENRTCHWGFDSANWRAYILLSQDYTGKEEQA 298
Query: 272 NYDQCL 277
+CL
Sbjct: 299 RLGRCL 304
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 96/152 (63%), Gaps = 15/152 (9%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHIDKIVTF----- 358
C +QLEILK+ GILP +A SCGL+TKTDAERLC+ LL+ P P + +
Sbjct: 153 CTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLYGGAYPPPCKKELAASLALGLE 212
Query: 359 ----SFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTC 414
S +VYHECFGKCKG+ +PEL++ + CIQCL+C + P KFV H H + ENRTC
Sbjct: 213 LSERSVRVYHECFGKCKGLLVPELYSSPSAACIQCLDCRLMYPPHKFVVHSHKALENRTC 272
Query: 415 HWGFESVKWRSYLL------AVEEQQNYDQCL 440
HWGF+S WR+Y+L EEQ +CL
Sbjct: 273 HWGFDSANWRAYILLSQDYTGKEEQARLGRCL 304
>sp|P17863|SKI_AVIES Transforming protein Ski OS=Avian erythroblastosis virus (strain
Sloan-Kettering) GN=V-SKI PE=3 SV=1
Length = 437
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/232 (56%), Positives = 162/232 (69%), Gaps = 12/232 (5%)
Query: 76 PILTTSDQSRSELSETLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVCDDLQ 135
P SD+S +E ET+LEGETISCFVVGGEKRLCLPQILNSVLRDFSL QIN VCD+L
Sbjct: 51 PFFMPSDRS-TERCETILEGETISCFVVGGEKRLCLPQILNSVLRDFSLQQINSVCDELH 109
Query: 136 IFCSRCNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHIDK---- 191
I+CSRC +QLEILK+ GILP +A SCGL+TKTDAERLC+ LL+ G P H K
Sbjct: 110 IYCSRCTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLYG--GTYPPHCKKEFSS 167
Query: 192 -----IVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSS 246
+ SFKVYHECFGKCKG+ +PEL+++ + CIQCL+C + P KFV H H S
Sbjct: 168 TIELELTEKSFKVYHECFGKCKGLLVPELYSNPSAACIQCLDCRLMYPPHKFVVHSHKSL 227
Query: 247 ENRTCHWGFESVKWRSYLLAVEEQQNYDQCLKILQIFKEQHIETTTSGKRKQ 298
ENRTCHWGF+S WRSY+L ++ ++ ++ Q+ E + + K K+
Sbjct: 228 ENRTCHWGFDSANWRSYILLSQDYTGKEEKARLGQLLDEMKEKFDYNNKYKR 279
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 107/167 (64%), Gaps = 11/167 (6%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHIDK--------- 354
C +QLEILK+ GILP +A SCGL+TKTDAERLC+ LL+ G P H K
Sbjct: 115 CTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLYG--GTYPPHCKKEFSSTIELE 172
Query: 355 IVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTC 414
+ SFKVYHECFGKCKG+ +PEL+++ + CIQCL+C + P KFV H H S ENRTC
Sbjct: 173 LTEKSFKVYHECFGKCKGLLVPELYSNPSAACIQCLDCRLMYPPHKFVVHSHKSLENRTC 232
Query: 415 HWGFESVKWRSYLLAVEEQQNYDQCLKILQIFKEQHIETTTSGKRKQ 461
HWGF+S WRSY+L ++ ++ ++ Q+ E + + K K+
Sbjct: 233 HWGFDSANWRSYILLSQDYTGKEEKARLGQLLDEMKEKFDYNNKYKR 279
>sp|Q9TUG2|SKI_HORSE Ski oncogene OS=Equus caballus GN=SKI PE=2 SV=1
Length = 730
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/309 (47%), Positives = 182/309 (58%), Gaps = 37/309 (11%)
Query: 1 MMETIGQQPAYNPH--LKKVLKTYQLSAVKSLQGPSTVLRTEGVVTVTLVPKKEPADSAE 58
M G + + PH L+K L+ + LS++ SL GP+ KKE A A
Sbjct: 1 MEAAAGGRGGFQPHPGLQKTLEQFHLSSMSSLGGPAAF----SARWAQEAYKKESAKEAG 56
Query: 59 PSPEPYITPPP---------PPIQQLP------ILTTSDQSRSELSETLLEGETISCFVV 103
+ P P P IQ P SD+S +E ET+LEGETISCFVV
Sbjct: 57 AAAVPAPVPAAAEPPPVLHLPAIQPPPPVLPGPFFMPSDRS-TERCETVLEGETISCFVV 115
Query: 104 GGEKRLCLPQILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQLEILKLSGILPLTAASCG 163
GGEKRLCLPQILNSVLRDFSL QIN VCD+L +CSRC +QLEILK+ GILP +A SCG
Sbjct: 116 GGEKRLCLPQILNSVLRDFSLQQINSVCDELHTYCSRCTADQLEILKVMGILPFSAPSCG 175
Query: 164 LMTKTDAERLCSTLLHQRPGPTPRHIDKIVTF---------SFKVYHECFGKCKGVCMPE 214
L+TKTDAERLC+ LL+ P P + + S +VYHECFGKCKG+ +PE
Sbjct: 176 LITKTDAERLCNALLYGGAYPPPCKKELAASLALGLELSERSVRVYHECFGKCKGLLVPE 235
Query: 215 LFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVKWRSYLL------AVE 268
L++ + CIQCL+C + P KFV H H + ENRTCHWGF+S WR+Y+L E
Sbjct: 236 LYSSPSAACIQCLDCRLMYPPHKFVVHSHKALENRTCHWGFDSANWRAYILLSQDYTGKE 295
Query: 269 EQQNYDQCL 277
EQ +CL
Sbjct: 296 EQTRLGRCL 304
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 96/152 (63%), Gaps = 15/152 (9%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHIDKIVTF----- 358
C +QLEILK+ GILP +A SCGL+TKTDAERLC+ LL+ P P + +
Sbjct: 153 CTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLYGGAYPPPCKKELAASLALGLE 212
Query: 359 ----SFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTC 414
S +VYHECFGKCKG+ +PEL++ + CIQCL+C + P KFV H H + ENRTC
Sbjct: 213 LSERSVRVYHECFGKCKGLLVPELYSSPSAACIQCLDCRLMYPPHKFVVHSHKALENRTC 272
Query: 415 HWGFESVKWRSYLL------AVEEQQNYDQCL 440
HWGF+S WR+Y+L EEQ +CL
Sbjct: 273 HWGFDSANWRAYILLSQDYTGKEEQTRLGRCL 304
>sp|Q5R431|SKIL_PONAB Ski-like protein OS=Pongo abelii GN=SKIL PE=2 SV=1
Length = 684
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 181/303 (59%), Gaps = 35/303 (11%)
Query: 12 NPHLKKVLKTYQLSAVKSLQGPSTVLRTEGVVTVTLVPKKEPADSAEPSPEPYITPPPPP 71
NP LK L + LS+ SL GP+ ++ SP ++ P P
Sbjct: 83 NPSLKHTLAQFHLSSQSSLGGPAAFSARHSQESM--------------SPTVFLPLPSPQ 128
Query: 72 IQQLPILTTSDQSRSELSETLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVC 131
+ P+L SD S +EL++T+LEGE+ISCF VGGEKRLCLPQ+LNSVLR+F+L QIN VC
Sbjct: 129 VLPGPLLIPSDSS-TELTQTVLEGESISCFQVGGEKRLCLPQVLNSVLREFTLQQINTVC 187
Query: 132 DDLQIFCSRCNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHI-- 189
D+L I+CSRC EQL ILK+ GILP A SCGL+T TDA+RLC+ LL R P +
Sbjct: 188 DELYIYCSRCTSEQLHILKVLGILPFNAPSCGLITLTDAQRLCNALLRPRTFPQNGSVLP 247
Query: 190 -------DKIVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHV 242
K +F+V HEC GKC+G+ P+ + ++ CIQCLEC G F+PQ FV H
Sbjct: 248 AKNSLAQLKETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHS 307
Query: 243 HLSSENRTCHWGFESVKWRSYLLAVEEQQNY-----DQCLK-ILQIFKEQHIETTTSGKR 296
H S + RTCHWGFES KW YL Q Y ++ LK IL+ KE+ + SGKR
Sbjct: 308 HRSPDKRTCHWGFESAKWHCYLHV---NQKYLGTPEEKKLKIILEEMKEKF--SMRSGKR 362
Query: 297 KQT 299
Q+
Sbjct: 363 NQS 365
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 100/173 (57%), Gaps = 20/173 (11%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHID---------K 354
C EQL ILK+ GILP A SCGL+T TDA+RLC+ LL R P + K
Sbjct: 197 CTSEQLHILKVLGILPFNAPSCGLITLTDAQRLCNALLRPRTFPQNGSVLPAKNSLAQLK 256
Query: 355 IVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTC 414
+F+V HEC GKC+G+ P+ + ++ CIQCLEC G F+PQ FV H H S + RTC
Sbjct: 257 ETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHSHRSPDKRTC 316
Query: 415 HWGFESVKWRSYLLAVEEQQNY-----DQCLK-ILQIFKEQHIETTTSGKRKQ 461
HWGFES KW YL Q Y ++ LK IL+ KE+ + SGKR Q
Sbjct: 317 HWGFESAKWHCYLHV---NQKYLGTPEEKKLKIILEEMKEKF--SMRSGKRNQ 364
>sp|P12757|SKIL_HUMAN Ski-like protein OS=Homo sapiens GN=SKIL PE=1 SV=2
Length = 684
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 181/303 (59%), Gaps = 35/303 (11%)
Query: 12 NPHLKKVLKTYQLSAVKSLQGPSTVLRTEGVVTVTLVPKKEPADSAEPSPEPYITPPPPP 71
NP LK L + LS+ SL GP+ ++ SP ++ P P
Sbjct: 83 NPSLKHTLAQFHLSSQSSLGGPAAFSARHSQESM--------------SPTVFLPLPSPQ 128
Query: 72 IQQLPILTTSDQSRSELSETLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVC 131
+ P+L SD S +EL++T+LEGE+ISCF VGGEKRLCLPQ+LNSVLR+F+L QIN VC
Sbjct: 129 VLPGPLLIPSDSS-TELTQTVLEGESISCFQVGGEKRLCLPQVLNSVLREFTLQQINTVC 187
Query: 132 DDLQIFCSRCNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQR---------P 182
D+L I+CSRC +QL ILK+ GILP A SCGL+T TDA+RLC+ LL R P
Sbjct: 188 DELYIYCSRCTSDQLHILKVLGILPFNAPSCGLITLTDAQRLCNALLRPRTFPQNGSVLP 247
Query: 183 GPTPRHIDKIVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHV 242
+ K +F+V HEC GKC+G+ P+ + ++ CIQCLEC G F+PQ FV H
Sbjct: 248 AKSSLAQLKETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHS 307
Query: 243 HLSSENRTCHWGFESVKWRSYLLAVEEQQNY-----DQCLK-ILQIFKEQHIETTTSGKR 296
H S + RTCHWGFES KW YL Q Y ++ LK IL+ KE+ + SGKR
Sbjct: 308 HRSPDKRTCHWGFESAKWHCYLHV---NQKYLGTPEEKKLKIILEEMKEKF--SMRSGKR 362
Query: 297 KQT 299
Q+
Sbjct: 363 NQS 365
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 100/173 (57%), Gaps = 20/173 (11%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQR---------PGPTPRHIDK 354
C +QL ILK+ GILP A SCGL+T TDA+RLC+ LL R P + K
Sbjct: 197 CTSDQLHILKVLGILPFNAPSCGLITLTDAQRLCNALLRPRTFPQNGSVLPAKSSLAQLK 256
Query: 355 IVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTC 414
+F+V HEC GKC+G+ P+ + ++ CIQCLEC G F+PQ FV H H S + RTC
Sbjct: 257 ETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHSHRSPDKRTC 316
Query: 415 HWGFESVKWRSYLLAVEEQQNY-----DQCLK-ILQIFKEQHIETTTSGKRKQ 461
HWGFES KW YL Q Y ++ LK IL+ KE+ + SGKR Q
Sbjct: 317 HWGFESAKWHCYLHV---NQKYLGTPEEKKLKIILEEMKEKF--SMRSGKRNQ 364
>sp|Q60665|SKIL_MOUSE Ski-like protein OS=Mus musculus GN=Skil PE=2 SV=2
Length = 675
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 162/262 (61%), Gaps = 24/262 (9%)
Query: 12 NPHLKKVLKTYQLSAVKSLQGPSTVLRTEGVVTVTLVPKKEPADSAEPSPEPYITPPPPP 71
NP LK L + LS+ SL GP+ ++ SP ++ P P
Sbjct: 80 NPSLKHTLAQFHLSSQSSLGGPAAFSARYSQESM--------------SPTVFLPLPSPQ 125
Query: 72 IQQLPILTTSDQSRSELSETLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVC 131
+ P+L SD S +EL++TLLEGE+ISCF VGGEKRLCLPQ+LNSVLR+FSL QIN VC
Sbjct: 126 VLPGPLLIPSDSS-TELTQTLLEGESISCFQVGGEKRLCLPQVLNSVLREFSLQQINTVC 184
Query: 132 DDLQIFCSRCNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHI-- 189
D+L I+CSRC +QL ILK+ GILP A SCGL+T TDA+RLC+ LL R P I
Sbjct: 185 DELYIYCSRCTSDQLHILKVLGILPFNAPSCGLITLTDAQRLCNALLRPRTFPQNGSILP 244
Query: 190 -------DKIVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHV 242
K +F+V HEC GKC+G+ P+ + ++ CIQCLEC G F+PQ FV H
Sbjct: 245 AKSSLAQLKETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHS 304
Query: 243 HLSSENRTCHWGFESVKWRSYL 264
H S + RTCHWGFES KW YL
Sbjct: 305 HRSPDKRTCHWGFESAKWHCYL 326
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 82/133 (61%), Gaps = 9/133 (6%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPTPRHID---------K 354
C +QL ILK+ GILP A SCGL+T TDA+RLC+ LL R P I K
Sbjct: 194 CTSDQLHILKVLGILPFNAPSCGLITLTDAQRLCNALLRPRTFPQNGSILPAKSSLAQLK 253
Query: 355 IVTFSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTC 414
+F+V HEC GKC+G+ P+ + ++ CIQCLEC G F+PQ FV H H S + RTC
Sbjct: 254 ETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHSHRSPDKRTC 313
Query: 415 HWGFESVKWRSYL 427
HWGFES KW YL
Sbjct: 314 HWGFESAKWHCYL 326
>sp|A7M7C7|SKOR2_MOUSE SKI family transcriptional corepressor 2 OS=Mus musculus GN=Skor2
PE=1 SV=1
Length = 1008
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 107/181 (59%), Gaps = 8/181 (4%)
Query: 86 SELSETLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQ 145
+++ + +L G I V+ G++RLCL QI N++L++FS +I+ L I C +C P Q
Sbjct: 39 NQVGQVILYGIPIVSLVIDGQERLCLAQISNTLLKNFSYNEIHNRRVALGITCVQCTPVQ 98
Query: 146 LEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVTFSFKVYHECF 204
LEIL+ +G +P+++ CG++TK +AERLC + L + RP P+ D F+F V HEC
Sbjct: 99 LEILRRAGAMPISSRRCGMITKREAERLCKSFLGENRP---PKLPD---NFAFDVSHECA 152
Query: 205 GKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK-WRSY 263
C+G +P + ++CI+C C+ +FSP KF+ H H + + + + WR +
Sbjct: 153 WGCRGSFIPARYNSSRAKCIKCSYCNMYFSPNKFIFHSHRTPDAKYTQPDAANFNSWRRH 212
Query: 264 L 264
L
Sbjct: 213 L 213
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVTFSFKV 362
C P QLEIL+ +G +P+++ CG++TK +AERLC + L + RP P+ D F+F V
Sbjct: 94 CTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGENRP---PKLPD---NFAFDV 147
Query: 363 YHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK 422
HEC C+G +P + ++CI+C C+ +FSP KF+ H H + + + +
Sbjct: 148 SHECAWGCRGSFIPARYNSSRAKCIKCSYCNMYFSPNKFIFHSHRTPDAKYTQPDAANFN 207
Query: 423 -WRSYL 427
WR +L
Sbjct: 208 SWRRHL 213
>sp|Q1LXZ9|SKR1B_DANRE SKI family transcriptional corepressor 1 homolog-B OS=Danio rerio
GN=skor1b PE=2 SV=1
Length = 751
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 118/216 (54%), Gaps = 13/216 (6%)
Query: 86 SELSETLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQ 145
+++SET L G I V+ G++RLCL QI N++L+++S +I+ L I C +C P Q
Sbjct: 34 NQVSETSLYGIPIVSLVIDGQERLCLAQISNTLLKNYSYNEIHNRRVALGITCVQCTPVQ 93
Query: 146 LEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPT-PRHIDKIVTFSFKVYHECF 204
LEIL+ +G +P+++ CG++TK +AERLC + L P P + F+F V HEC
Sbjct: 94 LEILRRAGAMPISSRRCGMITKREAERLCKSFLGAHSPPKLPEN------FAFDVSHECA 147
Query: 205 GKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK-WRSY 263
+G +P + ++CI+C C+ +FSP KF+ H H + E++ + WR +
Sbjct: 148 WGSRGNFIPARYNSSRAKCIKCSFCNMYFSPNKFIFHSHRTPESKYTQPDAANFNSWRRH 207
Query: 264 LLAVEEQQNYDQCLKILQIFKEQHIETTTSGKRKQT 299
L + ++ + D + + K G RK+T
Sbjct: 208 -LKLSDKNSSDDVIHAWEDVKAMF----NGGSRKRT 238
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 8/136 (5%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQRPGPT-PRHIDKIVTFSFKV 362
C P QLEIL+ +G +P+++ CG++TK +AERLC + L P P + F+F V
Sbjct: 89 CTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGAHSPPKLPEN------FAFDV 142
Query: 363 YHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK 422
HEC +G +P + ++CI+C C+ +FSP KF+ H H + E++ +
Sbjct: 143 SHECAWGSRGNFIPARYNSSRAKCIKCSFCNMYFSPNKFIFHSHRTPESKYTQPDAANFN 202
Query: 423 -WRSYLLAVEEQQNYD 437
WR +L ++ + D
Sbjct: 203 SWRRHLKLSDKNSSDD 218
>sp|Q2VWA4|SKOR2_HUMAN SKI family transcriptional corepressor 2 OS=Homo sapiens GN=SKOR2
PE=1 SV=2
Length = 1001
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 106/181 (58%), Gaps = 8/181 (4%)
Query: 86 SELSETLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQ 145
+++ + +L G I V+ G++RLCL QI N++L++FS +I+ L I C +C P Q
Sbjct: 39 NQVGQVILYGIPIVSLVIDGQERLCLAQISNTLLKNFSYNEIHNRRVALGITCVQCTPVQ 98
Query: 146 LEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVTFSFKVYHECF 204
LEIL+ +G +P+++ CG++TK +AERLC + L + RP P + F+F V HEC
Sbjct: 99 LEILRRAGAMPISSRRCGMITKREAERLCKSFLGENRPPKLPDN------FAFDVSHECA 152
Query: 205 GKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK-WRSY 263
C+G +P + ++CI+C C+ +FSP KF+ H H + + + + WR +
Sbjct: 153 WGCRGSFIPARYNSSRAKCIKCSYCNMYFSPNKFIFHSHRTPDAKYTQPDAANFNSWRRH 212
Query: 264 L 264
L
Sbjct: 213 L 213
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVTFSFKV 362
C P QLEIL+ +G +P+++ CG++TK +AERLC + L + RP P + F+F V
Sbjct: 94 CTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGENRPPKLPDN------FAFDV 147
Query: 363 YHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK 422
HEC C+G +P + ++CI+C C+ +FSP KF+ H H + + + +
Sbjct: 148 SHECAWGCRGSFIPARYNSSRAKCIKCSYCNMYFSPNKFIFHSHRTPDAKYTQPDAANFN 207
Query: 423 -WRSYL 427
WR +L
Sbjct: 208 SWRRHL 213
>sp|Q8BX46|SKOR1_MOUSE SKI family transcriptional corepressor 1 OS=Mus musculus GN=Skor1
PE=1 SV=2
Length = 964
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 137/274 (50%), Gaps = 28/274 (10%)
Query: 34 STVLRTEGV--VTVTLVPKKEPADSAEPSPEPYITPPPPPIQQL-PILTTSDQSRSELSE 90
LR+ G+ +T L P +E + S P Q+L P +S +++ E
Sbjct: 32 GAFLRSGGMEALTTQLGPGREGSSS------------PNSKQELQPYSGSSALKPNQVGE 79
Query: 91 TLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQLEILK 150
T L G I V+ G++RLCL QI N++L+++S +I+ L I C +C P QLEIL+
Sbjct: 80 TSLYGVPIVSLVIDGQERLCLAQISNTLLKNYSYNEIHNRRVALGITCVQCTPVQLEILR 139
Query: 151 LSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVTFSFKVYHECFGKCKG 209
+G +P+++ CG++TK +AERLC + L + +P P + F+F V HEC +G
Sbjct: 140 RAGAMPISSRRCGMITKREAERLCKSFLGEHKPPKLPEN------FAFDVVHECAWGSRG 193
Query: 210 VCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK-WRSYLLAVE 268
+P + ++CI+C C +FSP KF+ H H + + + + WR + L +
Sbjct: 194 SFIPARYNSSRAKCIKCGYCSMYFSPNKFIFHSHRTPDAKYTQPDAANFNSWRRH-LKLS 252
Query: 269 EQQNYDQCLKILQIFKEQHIETTTSGKRKQTHRL 302
++ D+ + K G RK+T L
Sbjct: 253 DKSATDELSHAWEDVKAMF----NGGTRKRTFSL 282
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVTFSFKV 362
C P QLEIL+ +G +P+++ CG++TK +AERLC + L + +P P + F+F V
Sbjct: 130 CTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGEHKPPKLPEN------FAFDV 183
Query: 363 YHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK 422
HEC +G +P + ++CI+C C +FSP KF+ H H + + + +
Sbjct: 184 VHECAWGSRGSFIPARYNSSRAKCIKCGYCSMYFSPNKFIFHSHRTPDAKYTQPDAANFN 243
Query: 423 -WRSYL 427
WR +L
Sbjct: 244 SWRRHL 249
>sp|P84551|SKOR1_RAT SKI family transcriptional corepressor 1 OS=Rattus norvegicus
GN=Skor1 PE=3 SV=1
Length = 964
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 137/274 (50%), Gaps = 28/274 (10%)
Query: 34 STVLRTEGV--VTVTLVPKKEPADSAEPSPEPYITPPPPPIQQL-PILTTSDQSRSELSE 90
LR+ G+ +T L P +E + S P Q+L P +S +++ E
Sbjct: 32 GAFLRSGGMEALTTQLGPGREGSSS------------PNSKQELQPYSGSSALKPNQVGE 79
Query: 91 TLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQLEILK 150
T L G I V+ G++RLCL QI N++L+++S +I+ L I C +C P QLEIL+
Sbjct: 80 TSLYGVPIVSLVIDGQERLCLAQISNTLLKNYSYNEIHNRRVALGITCVQCTPVQLEILR 139
Query: 151 LSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVTFSFKVYHECFGKCKG 209
+G +P+++ CG++TK +AERLC + L + +P P + F+F V HEC +G
Sbjct: 140 RAGAMPISSRRCGMITKREAERLCKSFLGEHKPPKLPEN------FAFDVVHECAWGSRG 193
Query: 210 VCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK-WRSYLLAVE 268
+P + ++CI+C C +FSP KF+ H H + + + + WR + L +
Sbjct: 194 SFIPARYNSSRAKCIKCGYCSMYFSPNKFIFHSHRTPDAKYTQPDAANFNSWRRH-LKLS 252
Query: 269 EQQNYDQCLKILQIFKEQHIETTTSGKRKQTHRL 302
++ D+ + K G RK+T L
Sbjct: 253 DKSATDELSHAWEDVKAMF----NGGTRKRTFSL 282
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVTFSFKV 362
C P QLEIL+ +G +P+++ CG++TK +AERLC + L + +P P + F+F V
Sbjct: 130 CTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGEHKPPKLPEN------FAFDV 183
Query: 363 YHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK 422
HEC +G +P + ++CI+C C +FSP KF+ H H + + + +
Sbjct: 184 VHECAWGSRGSFIPARYNSSRAKCIKCGYCSMYFSPNKFIFHSHRTPDAKYTQPDAANFN 243
Query: 423 -WRSYL 427
WR +L
Sbjct: 244 SWRRHL 249
>sp|P84550|SKOR1_HUMAN SKI family transcriptional corepressor 1 OS=Homo sapiens GN=SKOR1
PE=1 SV=1
Length = 965
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 76 PILTTSDQSRSELSETLLEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVCDDLQ 135
P +S +++ ET L G I V+ G++RLCL QI N++L+++S +I+ L
Sbjct: 65 PYSGSSALKPNQVGETSLYGVPIVSLVIDGQERLCLAQISNTLLKNYSYNEIHNRRVALG 124
Query: 136 IFCSRCNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVT 194
I C +C P QLEIL+ +G +P+++ CG++TK +AERLC + L + +P P +
Sbjct: 125 ITCVQCTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGEHKPPKLPEN------ 178
Query: 195 FSFKVYHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWG 254
F+F V HEC +G +P + ++CI+C C +FSP KF+ H H + + +
Sbjct: 179 FAFDVVHECAWGSRGSFIPARYNSSRAKCIKCGYCSMYFSPNKFIFHSHRTPDAKYTQPD 238
Query: 255 FESVK-WRSYLLAVEEQQNYDQCLKILQIFKEQHIETTTSGKRKQTHRL 302
+ WR + L + ++ D+ + K G RK+T L
Sbjct: 239 AANFNSWRRH-LKLSDKSATDELSHAWEDVKAMF----NGGTRKRTFSL 282
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 304 CNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQ-RPGPTPRHIDKIVTFSFKV 362
C P QLEIL+ +G +P+++ CG++TK +AERLC + L + +P P + F+F V
Sbjct: 130 CTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGEHKPPKLPEN------FAFDV 183
Query: 363 YHECFGKCKGVCMPELFTDGESRCIQCLECHGFFSPQKFVCHVHLSSENRTCHWGFESVK 422
HEC +G +P + ++CI+C C +FSP KF+ H H + + + +
Sbjct: 184 VHECAWGSRGSFIPARYNSSRAKCIKCGYCSMYFSPNKFIFHSHRTPDAKYTQPDAANFN 243
Query: 423 -WRSYL 427
WR +L
Sbjct: 244 SWRRHL 249
>sp|Q80YR3|SKDA1_MOUSE SKI/DACH domain-containing protein 1 OS=Mus musculus GN=Skida1 PE=2
SV=1
Length = 822
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 45/89 (50%)
Query: 93 LEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQLEILKLS 152
++G + ++ G++ L Q+ +L++ +++ D L++ C+ E+L LK
Sbjct: 11 VDGVRLGYLIIKGKQMFALSQVFTDLLKNIPRTTVHKRMDHLKVKKHHCDLEELRKLKAI 70
Query: 153 GILPLTAASCGLMTKTDAERLCSTLLHQR 181
+ AA C L+++ D E L ++ +R
Sbjct: 71 NSIAFHAAKCTLISREDVEALYTSCKTER 99
>sp|Q1XH10|SKDA1_HUMAN SKI/DACH domain-containing protein 1 OS=Homo sapiens GN=SKIDA1 PE=2
SV=1
Length = 827
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 45/89 (50%)
Query: 93 LEGETISCFVVGGEKRLCLPQILNSVLRDFSLPQINQVCDDLQIFCSRCNPEQLEILKLS 152
++G + ++ G++ L Q+ +L++ +++ D L++ C+ E+L LK
Sbjct: 11 VDGVRLGYLIIKGKQMFALSQVFTDLLKNIPRTTVHKRMDHLKVKKHHCDLEELRKLKAI 70
Query: 153 GILPLTAASCGLMTKTDAERLCSTLLHQR 181
+ AA C L+++ D E L ++ +R
Sbjct: 71 NSIAFHAAKCTLISREDVEALYTSCKTER 99
>sp|Q9QYB2|DACH1_MOUSE Dachshund homolog 1 OS=Mus musculus GN=Dach1 PE=1 SV=1
Length = 751
Score = 38.9 bits (89), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 93 LEGETISCFVVGGEKRLCLPQILNSVLRDF--SLPQINQVCDDLQIFCSRCNPEQLEILK 150
L G ++ F V G + +CLPQ + L+ L + L+I CN EQ+ IL+
Sbjct: 186 LRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITPVVCNVEQVRILR 245
Query: 151 LSGILPLTAASCGLMTKTDAERLCS--TLLHQRPGPTPRHIDKIVT 194
G + C L+++ D E L + T RPG P+ + +
Sbjct: 246 GLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTS 291
>sp|Q9UI36|DACH1_HUMAN Dachshund homolog 1 OS=Homo sapiens GN=DACH1 PE=1 SV=2
Length = 758
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 93 LEGETISCFVVGGEKRLCLPQILNSVLRDF--SLPQINQVCDDLQIFCSRCNPEQLEILK 150
L G ++ F V G + +CLPQ + L+ L + L+I CN EQ+ IL+
Sbjct: 193 LRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITPVVCNVEQVRILR 252
Query: 151 LSGILPLTAASCGLMTKTDAERLCS--TLLHQRPGPTPRHIDKIVT 194
G + C L+++ D E L + T RPG P+ + +
Sbjct: 253 GLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTS 298
>sp|Q96NX9|DACH2_HUMAN Dachshund homolog 2 OS=Homo sapiens GN=DACH2 PE=2 SV=1
Length = 599
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 93 LEGETISCFVVGGEKRLCLPQILNSVLRDF--SLPQINQVCDDLQIFCSRCNPEQLEILK 150
+ G ++ F++ G++ +CLPQ+ + L+ L + L I C EQ+ IL+
Sbjct: 73 MHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILR 132
Query: 151 LSGILPLTAASCGLMTKTDAERL 173
G + C L+T+ D E L
Sbjct: 133 GLGAIQPGVNRCKLITRKDFETL 155
>sp|Q925Q8|DACH2_MOUSE Dachshund homolog 2 OS=Mus musculus GN=Dach2 PE=1 SV=1
Length = 634
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 93 LEGETISCFVVGGEKRLCLPQILNSVLRDF--SLPQINQVCDDLQIFCSRCNPEQLEILK 150
+ G ++ F++ G++ +CLPQ+ + L+ L + L I C EQ+ IL+
Sbjct: 80 MHGVKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILR 139
Query: 151 LSGILPLTAASCGLMTKTDAERL 173
G + C L+T+ D E L
Sbjct: 140 GLGAIQPGVNRCKLITRKDFETL 162
>sp|A6UN87|COFG_METVS FO synthase subunit 1 OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=cofG PE=3 SV=1
Length = 351
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 23/121 (19%)
Query: 83 QSRSELSETLLEGETISC----FVVG---GEKRLCLPQILNSVLRDFSLPQINQVCD--- 132
+++E+ E LL+ +++ C F G E L +++ ++ L + +CD
Sbjct: 66 MTKNEVKEILLKADSLGCREALFTFGENVDENELVREKLIKMGYKNI-LEYLYDLCDWCL 124
Query: 133 -DLQIF----CSRCNPEQLEILKLSGILPLTAASCGLMTKTDAERLCSTLLHQR-PGPTP 186
+ I C N ++L+ L+ + S GLM + +ERLC T+ H++ PG P
Sbjct: 125 SNTNILPHTNCGILNYDELKYLRKVNV------SMGLMLENSSERLCKTVAHEKSPGKNP 178
Query: 187 R 187
+
Sbjct: 179 K 179
>sp|A9AB67|COFG_METM6 FO synthase subunit 1 OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=cofG PE=3 SV=1
Length = 352
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 160 ASCGLMTKTDAERLCSTLLHQR-PGPTPR 187
AS GLM + +ERLCST+ H++ PG P
Sbjct: 151 ASMGLMLENSSERLCSTIAHEKSPGKDPN 179
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 323 ASCGLMTKTDAERLCSTLLHQR-PGPTPR 350
AS GLM + +ERLCST+ H++ PG P
Sbjct: 151 ASMGLMLENSSERLCSTIAHEKSPGKDPN 179
>sp|C1N1Y2|GUFP_MICPC Translation factor GUF1 homolog, chloroplastic OS=Micromonas
pusilla (strain CCMP1545) GN=MICPUCDRAFT_51778 PE=3 SV=1
Length = 702
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 39 TEGVVTVTLVPKKEPADSAEPSPEPYITPPPPPIQQLPILTTSDQSRSELSETLL 93
T G V + PKKE A+ P + PP I+ I+ D +S L++TLL
Sbjct: 59 TSGDANVVIKPKKE---RAKVDPNAVLQVPPSQIRNFSIIAHIDHGKSTLADTLL 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,718,952
Number of Sequences: 539616
Number of extensions: 7889597
Number of successful extensions: 33538
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 33137
Number of HSP's gapped (non-prelim): 286
length of query: 461
length of database: 191,569,459
effective HSP length: 121
effective length of query: 340
effective length of database: 126,275,923
effective search space: 42933813820
effective search space used: 42933813820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)