RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11662
(346 letters)
>d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 360
Score = 272 bits (696), Expect = 4e-90
Identities = 103/361 (28%), Positives = 159/361 (44%), Gaps = 65/361 (18%)
Query: 8 AKQEYWLNCFEESVNKFAERAIASQPHSTTGEERATKFREKYFAERAIASQPHSTTGEER 67
+ W+N F S+ F +RA S R
Sbjct: 35 PNEISWINVFANSIPSFKKRA---------------------------ESDITVPDAPAR 67
Query: 68 ATKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLL-DTIEHYLKEFDFPDPYLEF 126
A KF E+Y L LK+ P ++G LL E L+E F D + +
Sbjct: 68 AEKFAERYAGILEDLKKDP---------ESHGGPPDGILLCRLREQVLRELGFRDIFKKV 118
Query: 127 VKFET----KYIADCLDFI------------------AANLINSIECMDGKSIKATGGGA 164
E + A N+ + + G
Sbjct: 119 KDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIFDLGSAQLAEVFSRDGMSF 178
Query: 165 YKYANLIQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELL 224
+ + PW++DDL+++ + N KA IFVDNSG DI+LGILPFARELL
Sbjct: 179 LASCQNLVPR----PWVIDDLENFQAKWIN-KSWKKAVIFVDNSGADIILGILPFARELL 233
Query: 225 RRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLD 284
RRG +V+L AN P++ND+T +EL +L Q + + + +L+ + P +D
Sbjct: 234 RRGAQVVLAANELPSINDITCTELTEILSQLKDENGQLL-GVDTSKLLIANSGNDLPVID 292
Query: 285 LSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFS 344
LSR+ ++LA S DL+++EGMGR + TNL A+F C+SLK+ ++K+ +A+ LGG+++
Sbjct: 293 LSRVSQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYD 352
Query: 345 V 345
Sbjct: 353 C 353
>d2ffja1 e.50.1.1 (A:7-288) Hypothetical protein AF1104
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 282
Score = 102 bits (255), Expect = 7e-26
Identities = 36/246 (14%), Positives = 71/246 (28%), Gaps = 33/246 (13%)
Query: 111 EHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYANL 170
+ DPY E + L + S + I + G + Y
Sbjct: 53 RRVYEILGVEDPYAEVKARANEVARQVLPLAKEIVEGSDDPFKTAVIVSIVGNNFDYGVQ 112
Query: 171 -----------IQEKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPF 219
++ ++D + + K DN+G +I L
Sbjct: 113 GHKVVEEEFRDFLKRKVQEGLKINDTERIKEL-----SSGKVVYLTDNAG-EIFFDTL-L 165
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
+E+ RR K+ P ++D T + + + + +
Sbjct: 166 MKEIKRRCEKLTAVVRGRPIISDATIEDARLA-------------RVDKIADELLTNGKG 212
Query: 280 GPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLG 339
+ + L + L DLIV +GM + L+ L K +A+ +G
Sbjct: 213 AIGIIMDELPDETRKALEEADLIVAKGMAN--YECLSDGSLKPIAFLLTAKCEPVARDIG 270
Query: 340 GQMFSV 345
+ +
Sbjct: 271 VNVGDM 276
>d2g8la1 e.50.1.1 (A:1-284) Hypothetical protein PH1575 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 284
Score = 101 bits (254), Expect = 1e-25
Identities = 26/174 (14%), Positives = 56/174 (32%), Gaps = 22/174 (12%)
Query: 173 EKLGLSPWLVDDLDDWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFARELLRRG-TKVI 231
EK+ +DD + + + DN G + + ++ +V
Sbjct: 126 EKMLKDKLYIDDSKELFEEVKR---AENILYITDNVG-EHYFDAI-LIEKIREISNAEVY 180
Query: 232 LCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQAGPCLDLSRLGRD 291
+ P +ND T +L + + +S+G + + L + R+
Sbjct: 181 IAGKEGPIINDATVEDLKRAGLEK------LGKVISTGTRI--------VGVPLKLVSRE 226
Query: 292 LATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLAQRLGGQMFSV 345
+ D+I+ +G G L+ L K +A+ L ++
Sbjct: 227 FMEAFNKADVIIAKGQGN--FETLSEINDSRIFFLLKAKCPAVARELKVPKGAL 278
>d2i7na1 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 146
Score = 69.5 bits (170), Expect = 4e-15
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 13/112 (11%)
Query: 91 FDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLINSIE 150
+ +AYG +R +E L F++F + + + + +S+
Sbjct: 41 YLTSNTAYGKTGIRD--VHLELKNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLH 98
Query: 151 CMDGKSIKATGGGAYKYANLIQEKLGLSPWLVDDLD------DWLDRLN-NG 195
+ ATGGGA+K+ + L +D+LD ++D + NG
Sbjct: 99 TT----LCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNG 146
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 30.9 bits (69), Expect = 0.19
Identities = 13/63 (20%), Positives = 22/63 (34%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
A L + G V++ A S L V L + A + + + + + VA
Sbjct: 31 AYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90
Query: 280 GPC 282
G
Sbjct: 91 GGL 93
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase
{Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 259
Score = 28.9 bits (64), Expect = 0.80
Identities = 15/63 (23%), Positives = 23/63 (36%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
A EL RRG V++ S+ + +EL L Q + I+ L +
Sbjct: 23 AIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82
Query: 280 GPC 282
G
Sbjct: 83 GGL 85
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 28.8 bits (64), Expect = 0.83
Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 6/114 (5%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
R + G +V++C L L A + + LV+ ET +
Sbjct: 23 VRAFVNSGARVVICDKDESGGR-----ALEQELPGAVFILCDVTQEDDVKTLVS-ETIRR 76
Query: 280 GPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRW 333
LD + +G + + NL +T L L ++
Sbjct: 77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ 130
>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Trypanosoma cruzi [TaxId: 5693]}
Length = 266
Score = 27.9 bits (61), Expect = 1.5
Identities = 8/41 (19%), Positives = 17/41 (41%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCH 260
A L ++G +V++ + +EL +A +C
Sbjct: 18 AVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCK 58
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR,
naphtol reductase) {Rice blast fungus (Magnaporthe
grisea) [TaxId: 148305]}
Length = 272
Score = 28.2 bits (62), Expect = 1.6
Identities = 14/62 (22%), Positives = 22/62 (35%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
A EL RRG KVI+ ++ + + + AA V + R+
Sbjct: 35 AMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 94
Query: 280 GP 281
G
Sbjct: 95 GK 96
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol
dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId:
35933]}
Length = 268
Score = 28.1 bits (62), Expect = 1.6
Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 8/105 (7%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHI---IANALSSGRLVAMET 276
A+ +R G KV++ + ++ + + + + LV
Sbjct: 23 AKLFVRYGAKVVIADIADDHGQ-----KVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTI 77
Query: 277 AQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTC 321
A+ G + L+T SI E R + N+ F
Sbjct: 78 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly
(Drosophila lebanonensis) [TaxId: 7225]}
Length = 254
Score = 28.1 bits (62), Expect = 1.7
Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 12/133 (9%)
Query: 215 GI-LPFARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVA 273
GI L +REL++R K + + + + + + + ++ + +
Sbjct: 16 GIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLL 75
Query: 274 METAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRW 333
+ +D+ G + + + RT+ N +
Sbjct: 76 KKIFDQLKTVDILINGAGILDD---------HQIERTIAINFTGLVNT--TTAILDFWDK 124
Query: 334 LAQRLGGQMFSVA 346
GG + ++
Sbjct: 125 RKGGPGGIIANIC 137
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil
seed rape (Brassica napus) [TaxId: 3708]}
Length = 244
Score = 27.8 bits (61), Expect = 1.8
Identities = 9/63 (14%), Positives = 20/63 (31%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
A L + G KV++ + + ++ QA T ++ ++
Sbjct: 18 ALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77
Query: 280 GPC 282
G
Sbjct: 78 GTI 80
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura
stramonium), II [TaxId: 4076]}
Length = 259
Score = 27.7 bits (61), Expect = 2.0
Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 6/104 (5%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
EL G V C+ + LND + A+VC +++ L+
Sbjct: 25 VEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD-LSSRSERQELMNTVANHF 83
Query: 280 GPCLDLSRL--GRDLATELSSIDLIVLEGMGRTVHTNLNAKFTC 321
L++ G + E +E + N A +
Sbjct: 84 HGKLNILVNNAGIVIYKEAKDYT---VEDYSLIMSINFEAAYHL 124
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium
[TaxId: 1404]}
Length = 261
Score = 27.8 bits (61), Expect = 2.1
Identities = 10/62 (16%), Positives = 18/62 (29%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
A KV++ S + E+ + +A V + LV +
Sbjct: 24 AIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83
Query: 280 GP 281
G
Sbjct: 84 GK 85
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 27.6 bits (61), Expect = 2.2
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 220 ARELLRRGTKVILCANSAPALNDV 243
AR L+++G KV+ CA + + ++
Sbjct: 27 ARALVQQGLKVVGCARTVGNIEEL 50
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 267
Score = 27.6 bits (60), Expect = 2.2
Identities = 12/52 (23%), Positives = 16/52 (30%), Gaps = 9/52 (17%)
Query: 63 TGEERATKFREKYVSRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYL 114
TGE F E +P+ S + V LL+ I L
Sbjct: 223 TGEALEKAFHEAVRRG----LLYPVALA-----SGEREIGVLPLLELILEAL 265
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)
{Burkholderia glumae [TaxId: 337]}
Length = 280
Score = 27.7 bits (61), Expect = 2.2
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 90 CFDYDFSAYGNLTVRSLLDTIEHYLKE 116
FDY +A G LT +L + +
Sbjct: 36 FFDYCLTAQGELTPAALDALVRREIAA 62
>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Nematode (Caenorhabditis elegans) [TaxId:
6239]}
Length = 235
Score = 27.1 bits (59), Expect = 2.5
Identities = 8/55 (14%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Query: 219 FARELLRRGTKVILCANSAPALND--VTYSELVVLLRQAATVCHIIANALSSGRL 271
+ G V+ SA D + Q ++ A++L ++
Sbjct: 18 ILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQV 72
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 272
Score = 27.3 bits (60), Expect = 2.6
Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 4/106 (3%)
Query: 220 ARELLRRGTKVILCANSAPALNDV--TYSELVVLLRQAATVCHIIANALSSGRLVAMETA 277
A + G V + S+ L + + V +Q +V + +++
Sbjct: 22 AILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81
Query: 278 QAGP--CLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTC 321
Q G L + ++ ++ +T+ NL A
Sbjct: 82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEM 127
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase
{Streptomyces coelicolor [TaxId: 1902]}
Length = 257
Score = 27.0 bits (59), Expect = 3.2
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
AR L + G +V +CA L + LR+A + S + A
Sbjct: 19 ARRLGKEGLRVFVCARGEEGLR-----TTLKELREAGVEADGRTCDVRSVPEIEALVAAV 73
>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
{Pseudomonas sp., lb400 [TaxId: 306]}
Length = 276
Score = 26.9 bits (59), Expect = 3.3
Identities = 14/108 (12%), Positives = 26/108 (24%), Gaps = 13/108 (12%)
Query: 220 ARELLRRGTKVILCANSAPALNDV------TYSELVVLLRQAATVCHIIANALSSGRLVA 273
+ G KV + SA L ++ +V +R + ++ +
Sbjct: 22 VDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID 81
Query: 274 METAQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTC 321
AG + L L H N+
Sbjct: 82 TLIPNAGIWDYSTALVDLPEESLD-------AAFDEVFHINVKGYIHA 122
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 237
Score = 27.0 bits (59), Expect = 3.4
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
A+ L G KV + + A + E+ V + V V + + A
Sbjct: 24 AQRLAADGHKVAVTHRGSGAPKGLFGVEVDV--TDSDAVDRAFTAVEEHQGPVEVLVSNA 81
Query: 280 GPC 282
G
Sbjct: 82 GLS 84
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 264
Score = 26.5 bits (58), Expect = 4.2
Identities = 17/131 (12%), Positives = 39/131 (29%), Gaps = 7/131 (5%)
Query: 220 ARELLRRGTKVILCANSAPALNDV--TYSELVVLLRQAATVCHIIANALSSGRLVAMETA 277
A R G KV + A L + V + +V + +++
Sbjct: 22 AVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81
Query: 278 QAGP--CLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTCESLKLAVIKNRWLA 335
+ G L + ++ + +E T++ NL + + +
Sbjct: 82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK---KAVPHLSST 138
Query: 336 QRLGGQMFSVA 346
+ + S+A
Sbjct: 139 KGEIVNISSIA 149
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI
{Human (Homo sapiens) [TaxId: 9606]}
Length = 244
Score = 26.5 bits (58), Expect = 4.2
Identities = 15/109 (13%), Positives = 29/109 (26%), Gaps = 17/109 (15%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
A E + +K++L + L E + H S+ E +
Sbjct: 24 AYEFAKLKSKLVLWDINKHGLE-----ETAAKCKGLGAKVHTFVVDCSN-----REDIYS 73
Query: 280 GPCLDLSRLGR-------DLATELSSIDLIVLEGMGRTVHTNLNAKFTC 321
+ +G S + + +T N+ A F
Sbjct: 74 SAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWT 122
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 26.6 bits (58), Expect = 4.4
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 81 HLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYL 114
LK P+ SA N V+ LLD + YL
Sbjct: 246 DLKITPVFLG-----SALKNKGVQLLLDAVVDYL 274
>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Leishmania major [TaxId: 5664]}
Length = 284
Score = 26.5 bits (57), Expect = 4.8
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLL-RQAATVCHIIANALSSGRLVAMETAQ 278
A L G V L + + A + + L A TV ++N ++ A +A
Sbjct: 19 AEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 78
Query: 279 AGPCLDLSRLGRDLATELSSIDLIV 303
+ L T D++V
Sbjct: 79 VTLFTRCAELVAACYTHWGRCDVLV 103
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Escherichia coli [TaxId: 562]}
Length = 243
Score = 26.3 bits (57), Expect = 4.8
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 220 ARELLRRGTKVILCANSAPALNDV 243
A L RG KVI A S +
Sbjct: 21 AETLAARGAKVIGTATSENGAQAI 44
>d1l1sa_ c.114.1.1 (A:) Hypothetical protein MTH1491 {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 111
Score = 25.5 bits (56), Expect = 5.0
Identities = 9/66 (13%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 187 DWLDRLNNGPPHSKAAIFVDNSGIDIVLGILPFA---RELLRRGTKVILCANSAPALNDV 243
+ L + + + G++++ ++ EL +G + C+N+ A +
Sbjct: 21 SNVRNLMADLESVRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGVRFCACSNTLRASG-M 79
Query: 244 TYSELV 249
+L+
Sbjct: 80 DGDDLL 85
>d1cjya2 c.19.1.2 (A:142-721) Cytosolic phospholipase A2 catalytic
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 580
Score = 26.5 bits (58), Expect = 5.7
Identities = 13/65 (20%), Positives = 24/65 (36%)
Query: 87 LLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEFVKFETKYIADCLDFIAANLI 146
L+ FD+ + L E + K P P ++ F+ + + +C F N
Sbjct: 429 LIISFDFSARPSDSSPPFKELLLAEKWAKMNKLPFPKIDPYVFDREGLKECYVFKPKNPD 488
Query: 147 NSIEC 151
+C
Sbjct: 489 MEKDC 493
>d3ctaa2 b.43.5.2 (A:90-220) CTP-dependent riboflavin kinase, Rfk
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 131
Score = 25.4 bits (56), Expect = 5.8
Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 13/64 (20%)
Query: 147 NSIECMDGKSIKATGGGAY-----KYANLIQEKLGLSPW-------LVDDLDDWLDRLNN 194
N++ + G G G Y +Y QEKLG+ P+ + L ++
Sbjct: 2 NNVV-ITGTVTSGMGEGRYYVARKQYIIQFQEKLGIIPYLGTLNIKVDQASLPELRKIRG 60
Query: 195 GPPH 198
Sbjct: 61 FRGI 64
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 255
Score = 26.2 bits (57), Expect = 5.9
Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHIIANALSSGRLVAMETAQA 279
A G V++ +A A N V E+ L QA I + L ++
Sbjct: 28 AITFATAGASVVVSDINADAANHVV-DEIQQLGGQAFACRCDITSEQELSALADFAISKL 86
Query: 280 GP 281
G
Sbjct: 87 GK 88
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 283
Score = 26.3 bits (58), Expect = 5.9
Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 3/41 (7%)
Query: 71 FREKYVSRL---HHLKQHPLLFCFDYDFSAYGNLTVRSLLD 108
R + +S L + L C D D ++ V L
Sbjct: 125 RRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTP 165
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter
oxydans [TaxId: 442]}
Length = 260
Score = 26.3 bits (57), Expect = 6.0
Identities = 7/24 (29%), Positives = 9/24 (37%)
Query: 220 ARELLRRGTKVILCANSAPALNDV 243
A L GT + L + AL
Sbjct: 22 ALRLAEEGTAIALLDMNREALEKA 45
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 274
Score = 26.2 bits (57), Expect = 6.4
Identities = 14/105 (13%), Positives = 33/105 (31%), Gaps = 4/105 (3%)
Query: 220 ARELLRRGTKVILCANSAPALNDVTYSELVVLLRQAATVCHI---IANALSSGRLVAMET 276
A + G +V + + L + T +++ A + + + A ++
Sbjct: 21 AVIFAKEGAQVTITGRNEDRLEE-TKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 79
Query: 277 AQAGPCLDLSRLGRDLATELSSIDLIVLEGMGRTVHTNLNAKFTC 321
A+ G L + ++ +E +T N A
Sbjct: 80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 124
>d1v53a1 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase, IPMDH
{Bacillus coagulans [TaxId: 1398]}
Length = 356
Score = 26.2 bits (57), Expect = 6.4
Identities = 7/39 (17%), Positives = 16/39 (41%)
Query: 131 TKYIADCLDFIAANLINSIECMDGKSIKATGGGAYKYAN 169
D L A+ + S+ + S+++ G Y+ +
Sbjct: 241 ENMFGDILSDEASVITGSLGMLPSASLRSDRFGMYEPVH 279
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase,
PGDH {Human (Homo sapiens) [TaxId: 9606]}
Length = 254
Score = 25.7 bits (56), Expect = 8.0
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 219 FARELLRRGTKVILCANSAPALNDVT 244
FA LL +G KV L + A
Sbjct: 19 FAEALLLKGAKVALVDWNLEAGVQCK 44
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 297
Score = 25.8 bits (56), Expect = 8.2
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 220 ARELLRRGTKVILCANSAPALNDV 243
+ELL G+ V++ + L
Sbjct: 29 VKELLELGSNVVIASRKLERLKSA 52
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 251
Score = 25.8 bits (56), Expect = 8.6
Identities = 4/25 (16%), Positives = 11/25 (44%)
Query: 220 ARELLRRGTKVILCANSAPALNDVT 244
A+ L G V++ + + ++
Sbjct: 22 AQGLAEAGCSVVVASRNLEEASEAA 46
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 244
Score = 25.3 bits (55), Expect = 9.4
Identities = 4/24 (16%), Positives = 11/24 (45%)
Query: 220 ARELLRRGTKVILCANSAPALNDV 243
+ L G +V+ + + L+ +
Sbjct: 24 VQALHATGARVVAVSRTQADLDSL 47
>d1xr7a_ e.8.1.4 (A:) Viral RNA polymerase {Human rhinovirus 16,
HRV-16 [TaxId: 31708]}
Length = 460
Score = 25.7 bits (56), Expect = 9.6
Identities = 7/50 (14%), Positives = 14/50 (28%), Gaps = 2/50 (4%)
Query: 77 SRLHHLKQHPLLFCFDYDFSAYGNLTVRSLLDTIEHYLKEFDFPDPYLEF 126
S++ + + FDY + Y + L F +
Sbjct: 219 SKIPLMLDGDCIMAFDY--TNYDGSIHPIWFKALGMVLDNLSFNPTLINR 266
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 236
Score = 25.6 bits (55), Expect = 9.8
Identities = 8/55 (14%), Positives = 12/55 (21%), Gaps = 2/55 (3%)
Query: 219 FARELLRRGTKVILCANSAP--ALNDVTYSELVVLLRQAATVCHIIANALSSGRL 271
+ R V A V QA V + L ++
Sbjct: 18 CVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 72
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 252
Score = 25.4 bits (55), Expect = 9.9
Identities = 5/24 (20%), Positives = 8/24 (33%)
Query: 220 ARELLRRGTKVILCANSAPALNDV 243
A L G V S +++
Sbjct: 17 ALRLSEAGHTVACHDESFKQKDEL 40
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.404
Gapped
Lambda K H
0.267 0.0711 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,281,050
Number of extensions: 59350
Number of successful extensions: 235
Number of sequences better than 10.0: 1
Number of HSP's gapped: 220
Number of HSP's successfully gapped: 48
Length of query: 346
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 260
Effective length of database: 1,226,816
Effective search space: 318972160
Effective search space used: 318972160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.2 bits)