Query psy11667
Match_columns 119
No_of_seqs 121 out of 391
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 15:48:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11667.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11667hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wff_A Riken cDNA 2810002D23 p 100.0 8.7E-30 3E-34 176.6 2.4 65 50-114 19-83 (85)
2 1wfl_A Zinc finger protein 216 99.9 4.8E-25 1.7E-29 149.4 5.1 53 50-103 19-71 (74)
3 1wg2_A Zinc finger (AN1-like) 99.9 2E-25 6.8E-30 147.7 1.6 55 49-104 8-62 (64)
4 1wfh_A Zinc finger (AN1-like) 99.9 1.6E-25 5.3E-30 148.2 0.7 55 50-105 9-63 (64)
5 1wfp_A Zinc finger (AN1-like) 99.9 8.3E-25 2.8E-29 148.3 3.3 55 49-104 18-72 (74)
6 1x4w_A Hypothetical protein FL 99.9 2.9E-24 1E-28 143.2 -0.5 57 48-104 7-65 (67)
7 1wfe_A Riken cDNA 2310008M20 p 99.4 9.8E-14 3.4E-18 95.7 1.8 62 49-119 18-82 (86)
8 1x4v_A Hypothetical protein LO 99.4 1.3E-13 4.6E-18 90.5 2.2 44 49-94 5-51 (63)
9 1wys_A Riken cDNA 2310008M20 p 99.2 5E-12 1.7E-16 85.4 4.1 42 54-97 12-56 (75)
10 1vfy_A Phosphatidylinositol-3- 93.5 0.033 1.1E-06 35.9 1.9 28 57-84 12-41 (73)
11 1wfk_A Zinc finger, FYVE domai 92.9 0.072 2.5E-06 35.7 2.9 31 54-84 7-39 (88)
12 2yw8_A RUN and FYVE domain-con 92.8 0.059 2E-06 35.4 2.3 29 56-84 19-49 (82)
13 1joc_A EEA1, early endosomal a 92.5 0.05 1.7E-06 38.6 1.8 29 56-84 69-99 (125)
14 1dvp_A HRS, hepatocyte growth 92.2 0.066 2.2E-06 40.5 2.3 28 57-84 162-191 (220)
15 1x4u_A Zinc finger, FYVE domai 92.2 0.13 4.5E-06 33.8 3.5 31 54-84 12-44 (84)
16 1z2q_A LM5-1; membrane protein 91.9 0.085 2.9E-06 34.8 2.2 30 55-84 20-51 (84)
17 3zyq_A Hepatocyte growth facto 91.8 0.13 4.4E-06 39.4 3.5 29 56-84 164-194 (226)
18 3t7l_A Zinc finger FYVE domain 90.2 0.12 4.3E-06 34.5 1.8 29 55-83 19-49 (90)
19 1y02_A CARP2, FYVE-ring finger 89.5 0.15 5E-06 36.4 1.8 40 57-96 20-64 (120)
20 2vrw_B P95VAV, VAV1, proto-onc 83.7 0.5 1.7E-05 37.8 2.2 41 54-97 355-400 (406)
21 3mpx_A FYVE, rhogef and PH dom 82.5 0.26 8.8E-06 39.6 0.0 28 56-83 375-404 (434)
22 3h0g_L DNA-directed RNA polyme 75.1 1.9 6.5E-05 27.7 2.4 35 53-87 18-55 (63)
23 2gmg_A Hypothetical protein PF 74.3 1.8 6E-05 30.5 2.3 26 65-93 62-88 (105)
24 4b6d_A RAC GTPase-activating p 72.3 1.4 4.7E-05 27.6 1.2 26 54-79 17-44 (61)
25 1z60_A TFIIH basal transcripti 70.9 1.4 4.6E-05 27.9 1.0 37 58-94 17-57 (59)
26 2ysj_A Tripartite motif-contai 67.6 6.9 0.00024 22.9 3.6 27 54-82 18-44 (63)
27 1twf_L ABC10-alpha, DNA-direct 66.8 2.7 9.2E-05 27.3 1.7 36 51-86 23-61 (70)
28 3c5k_A HD6, histone deacetylas 66.1 2.7 9.3E-05 29.1 1.8 30 56-90 24-54 (109)
29 2fnf_X Putative RAS effector N 61.6 4.5 0.00015 25.8 2.1 27 53-80 32-59 (72)
30 2ecv_A Tripartite motif-contai 60.3 12 0.00041 22.6 3.9 28 54-83 17-44 (85)
31 3ky9_A Proto-oncogene VAV; cal 60.1 4.4 0.00015 34.2 2.3 41 54-95 527-570 (587)
32 1wd2_A Ariadne-1 protein homol 60.0 4.2 0.00014 25.3 1.6 31 55-85 5-41 (60)
33 2ysl_A Tripartite motif-contai 59.2 10 0.00034 22.6 3.3 27 54-82 18-44 (73)
34 2csz_A Synaptotagmin-like prot 58.9 7.6 0.00026 25.8 2.9 36 53-88 22-60 (76)
35 3j21_g 50S ribosomal protein L 58.6 1.9 6.5E-05 26.7 -0.1 29 50-79 8-37 (51)
36 1rfh_A RAS association (ralgds 57.4 4.2 0.00014 24.8 1.3 25 54-79 20-45 (59)
37 2a20_A Regulating synaptic mem 57.4 9.2 0.00032 24.6 3.0 31 53-83 6-38 (62)
38 1faq_A RAF-1; transferase, ser 57.2 4.2 0.00014 23.6 1.3 24 55-80 13-37 (52)
39 3cc2_Z 50S ribosomal protein L 56.8 2.9 9.8E-05 29.9 0.5 34 52-85 56-93 (116)
40 3knv_A TNF receptor-associated 56.0 5.1 0.00017 28.2 1.7 26 55-82 30-55 (141)
41 2ee8_A Protein ODD-skipped-rel 55.8 9.3 0.00032 23.6 2.8 33 50-82 11-57 (106)
42 2ecw_A Tripartite motif-contai 55.8 16 0.00054 22.0 3.9 27 54-82 17-43 (85)
43 2d8t_A Dactylidin, ring finger 55.6 9.1 0.00031 23.0 2.7 49 54-104 13-64 (71)
44 1ffk_W Ribosomal protein L37AE 54.7 3.6 0.00012 27.1 0.7 33 51-83 22-58 (73)
45 1znf_A 31ST zinc finger from X 54.6 3.7 0.00013 18.9 0.6 11 72-82 2-13 (27)
46 2kvh_A Zinc finger and BTB dom 54.3 4.2 0.00014 18.9 0.8 11 71-81 3-14 (27)
47 2m0d_A Zinc finger and BTB dom 54.3 4.3 0.00015 18.8 0.8 12 71-82 3-15 (30)
48 2kvf_A Zinc finger and BTB dom 53.8 4.5 0.00015 18.8 0.8 12 71-82 3-15 (28)
49 1ard_A Yeast transcription fac 53.5 4.2 0.00014 18.9 0.7 11 71-81 2-13 (29)
50 1e0f_I Haemadin, factor IIA; c 53.5 6.3 0.00022 24.5 1.6 28 70-97 15-42 (57)
51 1r79_A Diacylglycerol kinase, 53.1 6.9 0.00024 26.0 1.9 23 57-80 39-66 (84)
52 1x6e_A Zinc finger protein 24; 52.9 7.6 0.00026 22.6 2.0 28 54-81 12-53 (72)
53 2kvg_A Zinc finger and BTB dom 52.7 4.2 0.00014 19.2 0.6 11 71-81 3-14 (27)
54 1kbe_A Kinase suppressor of RA 52.6 5.1 0.00018 24.1 1.1 22 57-80 15-37 (49)
55 2lce_A B-cell lymphoma 6 prote 52.4 8.2 0.00028 22.5 2.0 29 54-82 15-57 (74)
56 1ptq_A Protein kinase C delta 51.9 9.2 0.00031 21.8 2.1 26 54-79 9-37 (50)
57 2lvu_A Zinc finger and BTB dom 56.9 3.1 0.00011 19.2 0.0 14 71-84 2-16 (26)
58 1paa_A Yeast transcription fac 51.1 4.7 0.00016 18.9 0.6 12 71-82 2-14 (30)
59 2m0f_A Zinc finger and BTB dom 51.0 5 0.00017 18.5 0.8 12 71-82 2-14 (29)
60 2zet_C Melanophilin; complex, 50.4 7.6 0.00026 28.4 2.0 31 55-85 67-100 (153)
61 2enz_A NPKC-theta, protein kin 50.0 23 0.0008 21.5 4.0 27 54-80 21-50 (65)
62 1zbd_B Rabphilin-3A; G protein 49.8 7.7 0.00026 27.7 1.9 32 55-86 54-88 (134)
63 1rik_A E6APC1 peptide; E6-bind 49.8 5.4 0.00019 18.5 0.8 12 71-82 2-14 (29)
64 2yuu_A NPKC-delta, protein kin 49.7 9.5 0.00033 24.5 2.2 27 54-80 26-55 (83)
65 2m0e_A Zinc finger and BTB dom 49.6 5.7 0.00019 18.2 0.8 12 71-82 2-14 (29)
66 1klr_A Zinc finger Y-chromosom 49.4 4.8 0.00016 18.7 0.5 12 71-82 2-14 (30)
67 2csy_A Zinc finger protein 183 49.3 13 0.00044 22.8 2.7 26 55-82 14-39 (81)
68 3jyw_9 60S ribosomal protein L 49.1 6.3 0.00022 25.9 1.2 30 53-82 23-56 (72)
69 1vq8_Z 50S ribosomal protein L 48.5 4.8 0.00016 26.8 0.6 35 53-87 24-62 (83)
70 2yur_A Retinoblastoma-binding 48.4 15 0.00053 22.2 2.9 28 54-83 13-41 (74)
71 3j21_i 50S ribosomal protein L 47.8 6.1 0.00021 26.6 1.0 32 52-83 31-66 (83)
72 2ecj_A Tripartite motif-contai 47.8 17 0.00057 20.5 2.9 26 55-82 14-39 (58)
73 3uej_A NPKC-delta, protein kin 47.7 11 0.00038 23.0 2.2 26 54-79 18-46 (65)
74 2elx_A Zinc finger protein 406 46.9 6.5 0.00022 19.2 0.8 13 70-82 6-19 (35)
75 2lvt_A Zinc finger and BTB dom 52.1 4.2 0.00014 19.1 0.0 13 71-83 2-15 (29)
76 2co8_A NEDD9 interacting prote 45.8 11 0.00038 23.6 2.0 10 76-85 63-72 (82)
77 2elq_A Zinc finger protein 406 45.6 6.8 0.00023 19.5 0.8 13 70-82 8-21 (36)
78 1srk_A Zinc finger protein ZFP 45.3 7.1 0.00024 19.2 0.8 13 70-82 6-19 (35)
79 1p7a_A BF3, BKLF, kruppel-like 44.8 6.9 0.00024 19.5 0.7 13 70-82 10-23 (37)
80 2els_A Zinc finger protein 406 44.5 7.3 0.00025 19.3 0.8 13 70-82 8-21 (36)
81 2elv_A Zinc finger protein 406 44.1 7.6 0.00026 19.3 0.8 13 70-82 8-21 (36)
82 3iz5_m 60S ribosomal protein L 43.8 7.1 0.00024 26.8 0.8 31 53-83 33-67 (92)
83 2lv2_A Insulinoma-associated p 43.7 14 0.00047 23.7 2.2 29 54-82 26-68 (85)
84 2elt_A Zinc finger protein 406 43.4 7.7 0.00026 19.1 0.8 13 70-82 8-21 (36)
85 3ztg_A E3 ubiquitin-protein li 43.4 15 0.00053 22.9 2.4 27 54-82 11-38 (92)
86 2elm_A Zinc finger protein 406 43.2 7 0.00024 19.9 0.6 13 70-82 8-21 (37)
87 2gqj_A Zinc finger protein KIA 42.9 7.9 0.00027 24.3 0.9 29 54-82 22-66 (98)
88 2kfq_A FP1; protein, de novo p 42.6 6.2 0.00021 19.5 0.3 12 71-82 2-14 (32)
89 1bor_A Transcription factor PM 42.6 22 0.00075 20.6 2.9 38 56-95 6-43 (56)
90 2cot_A Zinc finger protein 435 42.5 26 0.00089 20.4 3.2 30 53-82 15-58 (77)
91 2lvr_A Zinc finger and BTB dom 48.4 5.3 0.00018 18.7 0.0 13 71-83 3-16 (30)
92 2ct2_A Tripartite motif protei 42.1 24 0.00082 21.5 3.1 29 54-82 13-43 (88)
93 2elp_A Zinc finger protein 406 42.0 8.3 0.00028 19.2 0.8 13 70-82 8-21 (37)
94 2elo_A Zinc finger protein 406 41.9 7.2 0.00025 19.4 0.5 13 70-82 8-21 (37)
95 2elr_A Zinc finger protein 406 41.0 8.4 0.00029 18.9 0.7 12 71-82 9-21 (36)
96 2ckl_B Ubiquitin ligase protei 41.0 11 0.00037 26.4 1.5 26 55-82 53-79 (165)
97 3lrq_A E3 ubiquitin-protein li 40.8 11 0.00037 24.5 1.4 26 55-82 21-47 (100)
98 1wjp_A Zinc finger protein 295 40.7 22 0.00075 22.1 2.8 30 53-82 13-54 (107)
99 3izc_m 60S ribosomal protein R 40.5 8.6 0.0003 26.4 0.9 32 52-83 32-67 (92)
100 2ckl_A Polycomb group ring fin 40.4 12 0.0004 24.4 1.5 38 56-95 15-56 (108)
101 1vd4_A Transcription initiatio 40.2 11 0.00039 21.7 1.3 27 55-81 13-50 (62)
102 1x5w_A Zinc finger protein 64, 39.8 13 0.00045 21.3 1.5 11 55-65 8-18 (70)
103 2egp_A Tripartite motif-contai 39.8 17 0.00058 21.8 2.1 26 55-82 11-36 (79)
104 1e4u_A Transcriptional repress 39.5 11 0.00039 23.9 1.3 28 55-82 10-39 (78)
105 2yqq_A Zinc finger HIT domain- 39.1 26 0.00088 21.8 2.9 25 55-83 11-36 (56)
106 2ayj_A 50S ribosomal protein L 38.7 14 0.00047 23.3 1.5 31 48-79 11-42 (56)
107 2y43_A E3 ubiquitin-protein li 38.7 12 0.00042 23.8 1.4 38 56-95 22-63 (99)
108 2enn_A NPKC-theta, protein kin 38.6 12 0.00042 23.7 1.3 27 54-80 32-61 (77)
109 4gne_A Histone-lysine N-methyl 38.5 14 0.00049 25.4 1.8 26 58-87 60-86 (107)
110 1t1h_A Gspef-atpub14, armadill 38.3 19 0.00066 21.7 2.2 26 55-82 7-32 (78)
111 1rim_A E6APC2 peptide; E6-bind 38.1 9.3 0.00032 19.0 0.6 11 71-81 2-13 (33)
112 4ayc_A E3 ubiquitin-protein li 38.0 13 0.00044 25.4 1.4 36 57-94 54-92 (138)
113 1njq_A Superman protein; zinc- 37.8 11 0.00037 19.2 0.8 13 70-82 5-18 (39)
114 1ef4_A Subunit N, DNA-directed 37.2 10 0.00035 23.8 0.7 13 56-68 3-15 (55)
115 4a17_Y RPL37A, 60S ribosomal p 36.9 7.7 0.00026 27.2 0.1 33 53-85 33-69 (103)
116 1twf_J DNA-directed RNA polyme 36.7 11 0.00039 24.6 0.9 13 56-68 4-16 (70)
117 3ng2_A RNF4, snurf, ring finge 36.2 13 0.00045 21.8 1.1 28 55-82 9-41 (71)
118 3h0g_I DNA-directed RNA polyme 36.0 15 0.00051 25.1 1.5 24 57-80 5-36 (113)
119 2ct7_A Ring finger protein 31; 36.0 14 0.00049 23.8 1.3 30 59-88 28-61 (86)
120 2djb_A Polycomb group ring fin 35.8 17 0.00058 21.8 1.6 26 55-82 14-40 (72)
121 2epc_A Zinc finger protein 32; 35.6 12 0.00042 19.0 0.8 13 70-82 10-23 (42)
122 2ctd_A Zinc finger protein 512 35.4 14 0.00048 23.5 1.2 11 56-66 34-44 (96)
123 2ea6_A Ring finger protein 4; 35.4 23 0.00077 20.5 2.1 29 54-82 13-46 (69)
124 2epv_A Zinc finger protein 268 35.3 12 0.00042 19.5 0.8 13 70-82 11-24 (44)
125 2db6_A SH3 and cysteine rich d 35.0 12 0.00042 23.6 0.9 27 54-80 26-55 (74)
126 2lq6_A Bromodomain-containing 35.0 22 0.00076 23.3 2.2 22 52-75 13-35 (87)
127 2ecy_A TNF receptor-associated 34.6 14 0.00047 21.8 1.0 27 55-83 14-40 (66)
128 1wil_A KIAA1045 protein; ring 34.4 14 0.00049 25.3 1.2 35 55-90 14-53 (89)
129 2xzl_A ATP-dependent helicase 34.3 15 0.0005 32.7 1.5 27 56-83 11-38 (802)
130 2yte_A Zinc finger protein 473 34.2 12 0.00043 19.0 0.7 13 70-82 9-22 (42)
131 2ytb_A Zinc finger protein 32; 34.1 12 0.00043 19.0 0.7 13 70-82 10-23 (42)
132 3iuf_A Zinc finger protein UBI 34.1 13 0.00045 20.3 0.8 14 70-83 6-20 (48)
133 1jm7_A BRCA1, breast cancer ty 34.1 17 0.0006 23.3 1.5 26 56-83 21-46 (112)
134 3f6q_B LIM and senescent cell 34.0 9.7 0.00033 22.5 0.2 9 58-66 13-21 (72)
135 1x68_A FHL5 protein; four-and- 33.9 20 0.00069 21.8 1.8 27 58-85 37-63 (76)
136 3hcs_A TNF receptor-associated 33.8 15 0.00052 25.7 1.3 27 55-83 17-43 (170)
137 2en2_A B-cell lymphoma 6 prote 33.6 14 0.00047 18.9 0.8 13 70-82 10-23 (42)
138 2eli_A Protein kinase C alpha 33.6 33 0.0011 22.1 2.8 44 54-97 26-72 (85)
139 1fv5_A First zinc finger of U- 33.3 12 0.0004 20.5 0.5 13 70-82 7-20 (36)
140 3fl2_A E3 ubiquitin-protein li 32.9 16 0.00056 24.2 1.3 24 57-82 53-76 (124)
141 2ytp_A Zinc finger protein 484 32.9 14 0.00049 19.4 0.8 13 70-82 11-24 (46)
142 4ayb_N DNA-directed RNA polyme 32.8 12 0.0004 24.3 0.5 13 56-68 4-16 (66)
143 3qt1_I DNA-directed RNA polyme 32.8 18 0.00063 25.7 1.6 26 55-80 23-56 (133)
144 2emi_A Zinc finger protein 484 32.6 15 0.0005 19.3 0.8 13 70-82 11-24 (46)
145 2ept_A Zinc finger protein 32; 32.6 15 0.0005 18.8 0.8 13 70-82 9-22 (41)
146 2eos_A B-cell lymphoma 6 prote 32.5 14 0.00048 19.0 0.7 13 70-82 10-23 (42)
147 3l11_A E3 ubiquitin-protein li 32.5 19 0.00066 23.5 1.6 39 55-95 14-56 (115)
148 1y8f_A UNC-13 homolog A, MUNC1 32.4 25 0.00085 21.5 2.0 26 54-79 22-50 (66)
149 2yu5_A Zinc finger protein 473 32.2 15 0.0005 19.1 0.8 13 70-82 11-24 (44)
150 1jm7_B BARD1, BRCA1-associated 32.1 21 0.00072 23.6 1.7 37 55-94 21-60 (117)
151 2wjy_A Regulator of nonsense t 32.1 15 0.00053 32.6 1.3 27 56-83 6-33 (800)
152 2eoy_A Zinc finger protein 473 32.1 15 0.00051 19.3 0.8 13 70-82 11-24 (46)
153 2en3_A ZFP-95, zinc finger pro 32.0 15 0.00052 19.2 0.8 14 70-83 11-25 (46)
154 2el5_A Zinc finger protein 268 31.9 15 0.00053 18.7 0.8 13 70-82 9-22 (42)
155 2emb_A Zinc finger protein 473 31.7 15 0.00052 19.0 0.8 13 70-82 11-24 (44)
156 2eow_A Zinc finger protein 347 31.6 15 0.00053 19.1 0.8 13 70-82 11-24 (46)
157 2enf_A Zinc finger protein 347 31.6 15 0.0005 19.3 0.7 13 70-82 11-24 (46)
158 2ytf_A Zinc finger protein 268 31.5 16 0.00053 19.1 0.8 13 70-82 11-24 (46)
159 2eof_A Zinc finger protein 268 31.3 16 0.00054 18.8 0.8 13 70-82 11-24 (44)
160 2em4_A Zinc finger protein 28 31.1 16 0.00055 19.2 0.8 13 70-82 11-24 (46)
161 2em3_A Zinc finger protein 28 31.0 16 0.00055 19.1 0.8 13 70-82 11-24 (46)
162 3hct_A TNF receptor-associated 31.0 19 0.00064 23.9 1.3 26 55-82 17-42 (118)
163 2row_A RHO-associated protein 30.9 12 0.00043 24.8 0.4 26 55-80 34-64 (84)
164 2epu_A Zinc finger protein 32; 30.8 15 0.0005 19.3 0.6 13 70-82 11-24 (45)
165 2eox_A Zinc finger protein 473 30.8 15 0.0005 19.1 0.6 14 70-83 11-25 (44)
166 2kwq_A Protein MCM10 homolog; 30.7 21 0.00073 24.2 1.6 20 71-90 48-67 (92)
167 2emj_A Zinc finger protein 28 30.5 16 0.00055 19.2 0.8 13 70-82 11-24 (46)
168 2eoj_A Zinc finger protein 268 30.5 14 0.00048 19.1 0.5 13 70-82 11-24 (44)
169 2eoz_A Zinc finger protein 473 30.5 15 0.00051 19.3 0.6 13 70-82 11-24 (46)
170 2yts_A Zinc finger protein 484 30.3 17 0.00058 18.9 0.8 13 70-82 11-24 (46)
171 2odd_A Protein CBFA2T1; MYND z 30.2 27 0.00094 21.0 1.9 24 55-82 16-41 (64)
172 2kiz_A E3 ubiquitin-protein li 30.2 51 0.0017 19.2 3.1 28 55-82 13-41 (69)
173 2emg_A Zinc finger protein 484 30.1 16 0.00054 19.1 0.7 13 70-82 11-24 (46)
174 1x4s_A Protein FON, zinc finge 30.1 32 0.0011 21.7 2.2 26 57-83 12-39 (59)
175 2yrj_A Zinc finger protein 473 30.1 17 0.00058 18.9 0.8 13 70-82 11-24 (46)
176 2eor_A Zinc finger protein 224 30.1 17 0.00058 18.9 0.8 13 70-82 11-24 (46)
177 1yop_A KTI11P; zinc finger, me 30.1 14 0.00048 24.6 0.5 13 71-83 23-35 (83)
178 2em6_A Zinc finger protein 224 29.8 16 0.00055 19.2 0.7 13 70-82 11-24 (46)
179 2enh_A Zinc finger protein 28 29.7 16 0.00055 19.2 0.7 13 70-82 11-24 (46)
180 2yto_A Zinc finger protein 484 29.6 17 0.0006 19.0 0.8 13 70-82 11-24 (46)
181 2en7_A Zinc finger protein 268 29.6 15 0.00051 18.9 0.5 13 70-82 11-24 (44)
182 2jr7_A DPH3 homolog; DESR1, CS 29.5 15 0.00053 24.8 0.7 11 71-81 23-33 (89)
183 2emy_A Zinc finger protein 268 29.5 18 0.00061 18.9 0.8 13 70-82 11-24 (46)
184 2ep3_A Zinc finger protein 484 29.3 18 0.00061 18.9 0.8 13 70-82 11-24 (46)
185 2en9_A Zinc finger protein 28 29.2 17 0.00057 19.1 0.7 13 70-82 11-24 (46)
186 2eon_A ZFP-95, zinc finger pro 29.2 17 0.00058 19.2 0.7 13 70-82 11-24 (46)
187 1yui_A GAGA-factor; complex (D 29.1 18 0.0006 19.9 0.8 13 70-82 23-36 (54)
188 2eoh_A Zinc finger protein 28 29.0 16 0.00054 19.2 0.6 12 71-82 12-24 (46)
189 2ep1_A Zinc finger protein 484 28.9 16 0.00053 19.1 0.5 13 70-82 11-24 (46)
190 2k4x_A 30S ribosomal protein S 28.8 35 0.0012 20.7 2.2 27 54-80 16-46 (55)
191 2eq1_A Zinc finger protein 347 28.8 16 0.00054 19.1 0.5 13 70-82 11-24 (46)
192 2emx_A Zinc finger protein 268 28.5 18 0.00063 18.7 0.8 13 70-82 9-22 (44)
193 1v5n_A PDI-like hypothetical p 28.4 24 0.00082 23.2 1.5 23 56-79 47-70 (89)
194 2emh_A Zinc finger protein 484 28.3 19 0.00065 18.8 0.8 13 70-82 11-24 (46)
195 2eq3_A Zinc finger protein 347 28.3 16 0.00054 19.1 0.5 13 70-82 11-24 (46)
196 2em2_A Zinc finger protein 28 28.2 19 0.00066 18.9 0.8 13 70-82 11-24 (46)
197 2yth_A Zinc finger protein 224 28.2 18 0.00063 18.9 0.7 13 70-82 11-24 (46)
198 2eoo_A ZFP-95, zinc finger pro 28.2 19 0.00065 18.9 0.8 13 70-82 11-24 (46)
199 2epx_A Zinc finger protein 28 28.2 18 0.00063 18.8 0.7 13 70-82 11-24 (47)
200 3u50_C Telomerase-associated p 28.1 14 0.00048 27.4 0.3 31 57-87 43-76 (172)
201 2eq0_A Zinc finger protein 347 28.1 19 0.00066 18.8 0.8 13 70-82 11-24 (46)
202 2eop_A Zinc finger protein 268 28.0 18 0.00062 18.8 0.7 13 70-82 11-24 (46)
203 2yti_A Zinc finger protein 347 28.0 16 0.00053 19.2 0.4 13 70-82 11-24 (46)
204 2emf_A Zinc finger protein 484 27.9 20 0.00067 18.8 0.8 13 70-82 11-24 (46)
205 2em7_A Zinc finger protein 224 27.9 20 0.00067 18.7 0.8 13 70-82 11-24 (46)
206 2ytj_A Zinc finger protein 484 27.8 20 0.00068 18.7 0.8 13 70-82 11-24 (46)
207 2ema_A Zinc finger protein 347 27.7 20 0.00068 18.7 0.8 13 70-82 11-24 (46)
208 2epw_A Zinc finger protein 268 27.6 20 0.00068 18.6 0.8 14 70-83 11-25 (46)
209 2em9_A Zinc finger protein 224 27.6 20 0.00068 18.6 0.8 13 70-82 11-24 (46)
210 4gzn_C ZFP-57, zinc finger pro 27.5 19 0.00065 21.4 0.8 12 71-82 4-16 (60)
211 2eq2_A Zinc finger protein 347 27.3 17 0.00058 19.0 0.5 13 70-82 11-24 (46)
212 2emp_A Zinc finger protein 347 27.3 20 0.0007 18.7 0.8 13 70-82 11-24 (46)
213 2ene_A Zinc finger protein 347 27.2 21 0.0007 18.7 0.8 13 70-82 11-24 (46)
214 2em5_A ZFP-95, zinc finger pro 27.2 21 0.0007 18.7 0.8 13 70-82 11-24 (46)
215 2enc_A Zinc finger protein 224 27.2 21 0.0007 18.7 0.8 13 70-82 11-24 (46)
216 2yso_A ZFP-95, zinc finger pro 27.1 20 0.0007 18.7 0.8 13 70-82 11-24 (46)
217 2eou_A Zinc finger protein 473 27.1 18 0.00061 18.8 0.5 13 70-82 11-24 (44)
218 2emz_A ZFP-95, zinc finger pro 27.1 18 0.00062 19.0 0.6 13 70-82 11-24 (46)
219 2yu8_A Zinc finger protein 347 27.0 21 0.00071 18.6 0.8 13 70-82 11-24 (46)
220 2uzg_A Ubiquitin carboxyl-term 27.0 37 0.0013 22.6 2.2 27 55-83 24-53 (97)
221 2eme_A Zinc finger protein 473 26.9 21 0.00072 18.5 0.8 13 70-82 11-24 (46)
222 2ytk_A Zinc finger protein 347 26.9 21 0.00072 18.6 0.8 13 70-82 11-24 (46)
223 2elz_A Zinc finger protein 224 26.8 20 0.00067 18.8 0.7 13 70-82 11-24 (46)
224 2eml_A Zinc finger protein 28 26.7 21 0.00072 18.6 0.8 13 70-82 11-24 (46)
225 2el4_A Zinc finger protein 268 26.7 21 0.00071 18.6 0.8 13 70-82 11-24 (46)
226 2ytn_A Zinc finger protein 347 26.7 20 0.00068 18.7 0.7 13 70-82 11-24 (46)
227 2eov_A Zinc finger protein 484 26.6 20 0.00069 18.6 0.7 13 70-82 11-24 (46)
228 2eom_A ZFP-95, zinc finger pro 26.5 19 0.00064 19.0 0.6 12 71-82 12-24 (46)
229 2emm_A ZFP-95, zinc finger pro 26.5 22 0.00074 18.5 0.8 13 70-82 11-24 (46)
230 2yrm_A B-cell lymphoma 6 prote 26.4 21 0.00071 18.6 0.7 13 70-82 9-22 (43)
231 2ep2_A Zinc finger protein 484 26.4 22 0.00074 18.6 0.8 13 70-82 11-24 (46)
232 1rmd_A RAG1; V(D)J recombinati 26.3 25 0.00087 22.9 1.3 26 56-83 23-48 (116)
233 2eoq_A Zinc finger protein 224 26.3 19 0.00065 18.8 0.6 13 70-82 11-24 (46)
234 2em8_A Zinc finger protein 224 26.2 22 0.00075 18.6 0.8 13 70-82 11-24 (46)
235 2ytg_A ZFP-95, zinc finger pro 26.2 22 0.00074 18.5 0.8 13 70-82 11-24 (46)
236 2en8_A Zinc finger protein 224 26.1 22 0.00075 18.5 0.8 13 70-82 11-24 (46)
237 1x64_A Alpha-actinin-2 associa 26.1 16 0.00053 23.0 0.2 12 56-67 25-36 (89)
238 2eq4_A Zinc finger protein 224 25.9 19 0.00066 18.7 0.6 13 70-82 11-24 (46)
239 2en6_A Zinc finger protein 268 25.9 20 0.00069 18.7 0.6 13 70-82 11-24 (46)
240 2emk_A Zinc finger protein 28 25.8 21 0.00073 18.7 0.7 13 70-82 11-24 (46)
241 2ely_A Zinc finger protein 224 25.7 22 0.00074 18.6 0.7 13 70-82 11-24 (46)
242 1x4l_A Skeletal muscle LIM-pro 25.6 19 0.00065 21.5 0.6 20 61-81 40-59 (72)
243 2em0_A Zinc finger protein 224 25.5 20 0.00068 18.7 0.6 13 70-82 11-24 (46)
244 2en1_A Zinc finger protein 224 25.4 21 0.00071 18.6 0.6 13 70-82 11-24 (46)
245 2el6_A Zinc finger protein 268 25.4 23 0.00077 18.6 0.8 13 70-82 11-24 (46)
246 1x61_A Thyroid receptor intera 25.3 20 0.00067 21.4 0.6 8 58-65 7-14 (72)
247 1wge_A Hypothetical protein 26 25.3 19 0.00066 23.9 0.6 11 71-81 30-40 (83)
248 2epz_A Zinc finger protein 28 25.2 22 0.00076 18.5 0.7 13 70-82 11-24 (46)
249 2ytq_A Zinc finger protein 268 25.2 22 0.00075 18.6 0.7 13 70-82 11-24 (46)
250 2dmd_A Zinc finger protein 64, 25.0 44 0.0015 19.9 2.2 28 55-82 7-48 (96)
251 2ytd_A Zinc finger protein 473 25.0 24 0.00082 18.4 0.8 13 70-82 11-24 (46)
252 2ehe_A Four and A half LIM dom 25.0 35 0.0012 20.8 1.8 27 58-85 45-71 (82)
253 2ep4_A Ring finger protein 24; 24.9 54 0.0019 19.3 2.6 29 54-82 13-42 (74)
254 2ysp_A Zinc finger protein 224 24.9 22 0.00074 18.6 0.6 13 70-82 11-24 (46)
255 2ep0_A Zinc finger protein 28 24.9 24 0.00082 18.4 0.8 13 70-82 11-24 (46)
256 2g45_A Ubiquitin carboxyl-term 24.7 62 0.0021 22.8 3.2 28 56-86 34-62 (129)
257 1l1o_C Replication protein A 7 24.5 21 0.00073 25.9 0.7 34 54-87 41-80 (181)
258 2ct0_A Non-SMC element 1 homol 24.5 33 0.0011 21.9 1.5 23 56-80 15-38 (74)
259 1g47_A Pinch protein; LIM doma 24.5 17 0.00059 21.9 0.2 11 56-66 11-21 (77)
260 2ytr_A Zinc finger protein 347 24.3 20 0.00068 18.7 0.4 13 70-82 11-24 (46)
261 2eoe_A Zinc finger protein 347 24.0 21 0.00072 18.5 0.5 13 70-82 11-24 (46)
262 2jr6_A UPF0434 protein NMA0874 23.9 28 0.00096 22.1 1.1 24 57-80 9-36 (68)
263 1z6u_A NP95-like ring finger p 23.6 29 0.001 24.3 1.3 24 57-82 79-102 (150)
264 3uk3_C Zinc finger protein 217 23.4 23 0.0008 19.1 0.6 13 70-82 3-16 (57)
265 2hf1_A Tetraacyldisaccharide-1 22.7 30 0.001 22.0 1.1 24 57-80 9-36 (68)
266 3j20_Y 30S ribosomal protein S 22.7 30 0.001 20.7 1.0 28 53-80 16-47 (50)
267 2ytm_A Zinc finger protein 28 22.7 23 0.00079 18.6 0.5 12 71-82 12-24 (46)
268 1x62_A C-terminal LIM domain p 22.5 15 0.00051 22.6 -0.4 11 56-66 15-25 (79)
269 2ect_A Ring finger protein 126 22.4 95 0.0033 18.4 3.4 30 54-83 13-43 (78)
270 1twf_I B12.6, DNA-directed RNA 22.3 29 0.001 23.9 1.0 25 57-81 5-37 (122)
271 4ayb_P DNA-directed RNA polyme 21.9 47 0.0016 20.3 1.8 32 57-88 4-41 (48)
272 1bbo_A Human enhancer-binding 21.8 28 0.00094 18.8 0.7 11 72-82 2-13 (57)
273 1a7i_A QCRP2 (LIM1); LIM domai 21.6 22 0.00077 21.7 0.3 10 57-66 8-17 (81)
274 2epq_A POZ-, at HOOK-, and zin 21.6 25 0.00086 18.3 0.5 12 71-82 10-22 (45)
275 2pk7_A Uncharacterized protein 21.6 35 0.0012 21.8 1.2 24 57-80 9-36 (69)
276 1x4k_A Skeletal muscle LIM-pro 21.5 23 0.00077 21.0 0.3 9 58-66 7-15 (72)
277 2con_A RUH-035 protein, NIN on 21.3 45 0.0015 22.0 1.7 32 48-79 7-39 (79)
278 2csh_A Zinc finger protein 297 21.3 51 0.0018 20.2 2.0 28 54-82 8-49 (110)
279 2xoc_A E3 ubiquitin-protein li 21.2 45 0.0016 26.6 2.1 27 58-84 81-118 (261)
280 3mhs_A Ubiquitin carboxyl-term 21.2 16 0.00055 29.4 -0.6 34 56-90 48-82 (476)
281 1wyh_A SLIM 2, skeletal muscle 21.1 23 0.00078 21.0 0.2 6 62-67 39-44 (72)
282 2ytt_A Zinc finger protein 473 21.0 25 0.00087 18.3 0.4 12 71-82 12-24 (46)
283 2adr_A ADR1; transcription reg 20.8 30 0.001 18.9 0.7 12 71-82 2-14 (60)
284 2eps_A POZ-, at HOOK-, and zin 20.8 31 0.0011 18.9 0.8 29 54-82 10-53 (54)
285 3ihp_A Ubiquitin carboxyl-term 20.8 64 0.0022 29.0 3.2 30 55-87 214-244 (854)
286 2epr_A POZ-, at HOOK-, and zin 20.5 30 0.001 18.4 0.6 11 71-81 12-23 (48)
287 2dj8_A Protein CBFA2T1; zinc f 20.4 73 0.0025 18.9 2.5 25 54-82 13-39 (60)
288 2epp_A POZ-, at HOOK-, and zin 20.4 28 0.00096 21.4 0.5 12 71-82 13-25 (66)
289 2d8y_A Eplin protein; LIM doma 20.2 24 0.00083 22.2 0.2 13 55-67 14-26 (91)
290 4gop_C Putative uncharacterize 20.1 24 0.00084 28.7 0.3 32 56-87 308-345 (444)
291 1pft_A TFIIB, PFTFIIBN; N-term 20.0 61 0.0021 18.5 2.0 26 56-81 5-35 (50)
No 1
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.95 E-value=8.7e-30 Score=176.56 Aligned_cols=65 Identities=37% Similarity=0.795 Sum_probs=61.0
Q ss_pred ccCCcCCCcccccccccccccceeeccCCcccCCCCCCCCCCCccccHHhhHHHHHHhCCccccc
Q psy11667 50 KKTKHKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGRHLLAATNPLVVAD 114 (119)
Q Consensus 50 ~~~~~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~HR~pe~H~C~fDyk~~gr~~Lak~NP~v~~~ 114 (119)
..+++.++||+.|+++|+|+++|+||||++||++|||+|+|+|+||||++||++|+++||+|+++
T Consensus 19 ~~~k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~ 83 (85)
T 1wff_A 19 QTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS 83 (85)
T ss_dssp CCCCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred ccCcccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence 34577789999999999996699999999999999999999999999999999999999999986
No 2
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.91 E-value=4.8e-25 Score=149.42 Aligned_cols=53 Identities=40% Similarity=0.882 Sum_probs=48.4
Q ss_pred ccCCcCCCcccccccccccccceeeccCCcccCCCCCCCCCCCccccHHhhHHH
Q psy11667 50 KKTKHKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGRHL 103 (119)
Q Consensus 50 ~~~~~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~HR~pe~H~C~fDyk~~gr~~ 103 (119)
.+.++.++||++|+++|+| ++|.||||++||++|||+|+|+|+||||.+||+.
T Consensus 19 ~~~k~~~nRC~~CrKkvgL-~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~ 71 (74)
T 1wfl_A 19 ELPKPKKNRCFMCRKKVGL-TGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP 71 (74)
T ss_dssp CCCCSCTTBCSSSCCBCGG-GCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred ccCCCcCCcChhhCCcccc-cCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence 4445678999999999999 8999999999999999999999999999999863
No 3
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.90 E-value=2e-25 Score=147.73 Aligned_cols=55 Identities=38% Similarity=0.864 Sum_probs=50.8
Q ss_pred cccCCcCCCcccccccccccccceeeccCCcccCCCCCCCCCCCccccHHhhHHHH
Q psy11667 49 VKKTKHKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGRHLL 104 (119)
Q Consensus 49 ~~~~~~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~HR~pe~H~C~fDyk~~gr~~L 104 (119)
+.++++.++||+.|+++|+| ++|+||||++||++|||+|+|+|+||||++||++|
T Consensus 8 ~~~~~~~~~rC~~C~kkvgl-~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~ 62 (64)
T 1wg2_A 8 PSRPVRPNNRCFSCNKKVGV-MGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS 62 (64)
T ss_dssp SSCCSCCSCSCTTTCCCCTT-SCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred CCCCCCcCCcChhhCCcccc-cCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence 45566778999999999999 79999999999999999999999999999999876
No 4
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.90 E-value=1.6e-25 Score=148.23 Aligned_cols=55 Identities=36% Similarity=0.873 Sum_probs=50.6
Q ss_pred ccCCcCCCcccccccccccccceeeccCCcccCCCCCCCCCCCccccHHhhHHHHH
Q psy11667 50 KKTKHKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGRHLLA 105 (119)
Q Consensus 50 ~~~~~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~HR~pe~H~C~fDyk~~gr~~La 105 (119)
.+.++.++||+.|+++|+| ++|+||||++||++|||+|+|+|+||||++||++|+
T Consensus 9 ~~~k~~~~rC~~C~kkvgl-~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~ 63 (64)
T 1wfh_A 9 PSPPQRPNRCTVCRKRVGL-TGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63 (64)
T ss_dssp CCCCSSCCCCTTTCCCCCT-TCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred CCCCCcCCcChhhCCccCc-cCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence 3446778999999999999 799999999999999999999999999999998774
No 5
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.90 E-value=8.3e-25 Score=148.27 Aligned_cols=55 Identities=40% Similarity=0.882 Sum_probs=51.0
Q ss_pred cccCCcCCCcccccccccccccceeeccCCcccCCCCCCCCCCCccccHHhhHHHH
Q psy11667 49 VKKTKHKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGRHLL 104 (119)
Q Consensus 49 ~~~~~~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~HR~pe~H~C~fDyk~~gr~~L 104 (119)
..+.++.++||+.|+++|+| ++|.||||++||++|||+|+|+|+||||++||++|
T Consensus 18 ~~~~k~~~~RC~~C~kkvgL-~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~ 72 (74)
T 1wfp_A 18 LDPPKSTATRCLSCNKKVGV-TGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS 72 (74)
T ss_dssp SCCTTCCCCBCSSSCCBCTT-TCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred cccCcccCccchhhcCcccc-cceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence 45667888999999999999 79999999999999999999999999999999865
No 6
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=2.9e-24 Score=143.19 Aligned_cols=57 Identities=39% Similarity=0.751 Sum_probs=50.2
Q ss_pred ccccCCcCCCccccccccccccc--ceeeccCCcccCCCCCCCCCCCccccHHhhHHHH
Q psy11667 48 CVKKTKHKRSRCAQCNAKLTVCS--SFTCRCRKLFCPRHRHPEEHACTFDYKAYGRHLL 104 (119)
Q Consensus 48 ~~~~~~~~k~RC~~C~kkl~Ls~--~f~CrCg~~FC~~HR~pe~H~C~fDyk~~gr~~L 104 (119)
...++++.++||+.|+++|+|.. +|.||||++||+.|||+|+|+|+||||++||+.|
T Consensus 7 ~~~~~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~ 65 (67)
T 1x4w_A 7 GSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS 65 (67)
T ss_dssp SCCCSCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred CCccCCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence 34566778899999999999932 4999999999999999999999999999998754
No 7
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.37 E-value=9.8e-14 Score=95.70 Aligned_cols=62 Identities=29% Similarity=0.520 Sum_probs=48.0
Q ss_pred cccCCcCCCcccc--cccccccccceeec-cCCcccCCCCCCCCCCCccccHHhhHHHHHHhCCcccccccccC
Q psy11667 49 VKKTKHKRSRCAQ--CNAKLTVCSSFTCR-CRKLFCPRHRHPEEHACTFDYKAYGRHLLAATNPLVVADKVVRI 119 (119)
Q Consensus 49 ~~~~~~~k~RC~~--C~kkl~Ls~~f~Cr-Cg~~FC~~HR~pe~H~C~fDyk~~gr~~Lak~NP~v~~~Kl~ki 119 (119)
...+++.+++|++ |+++ .+ ++|.|+ |+..||++|||+++|+|+.. ...+.++...+.++.+|
T Consensus 18 ~~~~~~~~~~C~~~~Ck~~-~~-l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~~~ 82 (86)
T 1wfe_A 18 PKTDEHKSYSCSFKGCTDV-EL-VAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVRSG 82 (86)
T ss_dssp CCCSCSCCEECCSTTCCCE-ES-SCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSSCS
T ss_pred ccccCCCCCCCCCcCCCCC-Cc-cceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHHHH
Confidence 3445667789999 9998 45 699999 99999999999999999963 23456666666655543
No 8
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=1.3e-13 Score=90.45 Aligned_cols=44 Identities=32% Similarity=0.834 Sum_probs=38.8
Q ss_pred cccCCcCCCcccc--cccccccccceeec-cCCcccCCCCCCCCCCCcc
Q psy11667 49 VKKTKHKRSRCAQ--CNAKLTVCSSFTCR-CRKLFCPRHRHPEEHACTF 94 (119)
Q Consensus 49 ~~~~~~~k~RC~~--C~kkl~Ls~~f~Cr-Cg~~FC~~HR~pe~H~C~f 94 (119)
..++++..++|++ |+++ +| ++|.|+ |+..||++|||+|+|+|+.
T Consensus 5 ~~k~k~~~~~Cs~~~Ck~~-~l-l~f~C~~C~~~FC~~HR~~e~H~C~~ 51 (63)
T 1x4v_A 5 SSGRKIFTNKCERAGCRQR-EM-MKLTCERCSRNFCIKHRHPLDHDCSG 51 (63)
T ss_dssp CCCCCTTCCCCCSTTCCCC-CS-SCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred ccCCcccCCCCCccCCCCC-Cc-cceECCCCCcccCcccCCccCCcCCC
Confidence 3456677899999 9998 56 699999 9999999999999999984
No 9
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.24 E-value=5e-12 Score=85.44 Aligned_cols=42 Identities=26% Similarity=0.721 Sum_probs=37.7
Q ss_pred cCCCcccc--cccccccccceeec-cCCcccCCCCCCCCCCCccccH
Q psy11667 54 HKRSRCAQ--CNAKLTVCSSFTCR-CRKLFCPRHRHPEEHACTFDYK 97 (119)
Q Consensus 54 ~~k~RC~~--C~kkl~Ls~~f~Cr-Cg~~FC~~HR~pe~H~C~fDyk 97 (119)
...+||+. |+++ .+ ++|.|+ |+.+||+.|||+++|+|++++.
T Consensus 12 ~~g~~Cs~~~C~~~-df-lpf~C~~C~~~FC~~HR~~e~H~C~~~~~ 56 (75)
T 1wys_A 12 DIGQHCQVQHCRQR-DF-LPFVCDGCSGIFCLEHRSKDSHGCSEVNV 56 (75)
T ss_dssp CCCCCCSCTTTCCC-SC-CCEECTTTCCEECSTTCSSGGGTCCCCSS
T ss_pred ccCCCcCcccCCCc-cc-eeeECcccCcCcCcccCCccccCCCCCcc
Confidence 45679999 9998 45 699999 9999999999999999999875
No 10
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=93.50 E-value=0.033 Score=35.93 Aligned_cols=28 Identities=32% Similarity=0.944 Sum_probs=23.5
Q ss_pred Ccccccccccccc-cceeec-cCCcccCCC
Q psy11667 57 SRCAQCNAKLTVC-SSFTCR-CRKLFCPRH 84 (119)
Q Consensus 57 ~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~H 84 (119)
..|..|+++.++. .-..|| ||.+||+.+
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~C 41 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEH 41 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccc
Confidence 4799999988774 468999 999999875
No 11
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=92.91 E-value=0.072 Score=35.72 Aligned_cols=31 Identities=32% Similarity=0.845 Sum_probs=24.6
Q ss_pred cCCCcccccccccccc-cceeec-cCCcccCCC
Q psy11667 54 HKRSRCAQCNAKLTVC-SSFTCR-CRKLFCPRH 84 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~H 84 (119)
.....|..|.++.++. .-..|| ||.+||+.+
T Consensus 7 ~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 39 (88)
T 1wfk_A 7 GMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC 39 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred CcCCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence 3445899999988773 357999 999999874
No 12
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=92.78 E-value=0.059 Score=35.42 Aligned_cols=29 Identities=28% Similarity=0.927 Sum_probs=23.7
Q ss_pred CCcccccccccccc-cceeec-cCCcccCCC
Q psy11667 56 RSRCAQCNAKLTVC-SSFTCR-CRKLFCPRH 84 (119)
Q Consensus 56 k~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~H 84 (119)
...|..|+++.++. .-..|| ||.+||+.+
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 49 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC 49 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence 45799999988874 367999 999999864
No 13
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=92.53 E-value=0.05 Score=38.59 Aligned_cols=29 Identities=28% Similarity=0.842 Sum_probs=23.4
Q ss_pred CCcccccccccccc-cceeec-cCCcccCCC
Q psy11667 56 RSRCAQCNAKLTVC-SSFTCR-CRKLFCPRH 84 (119)
Q Consensus 56 k~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~H 84 (119)
...|..|+++.++. .-..|| ||.+||+.+
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C 99 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC 99 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence 45899999988763 367999 999999854
No 14
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=92.23 E-value=0.066 Score=40.50 Aligned_cols=28 Identities=29% Similarity=0.878 Sum_probs=23.5
Q ss_pred Ccccccccccccc-cceeec-cCCcccCCC
Q psy11667 57 SRCAQCNAKLTVC-SSFTCR-CRKLFCPRH 84 (119)
Q Consensus 57 ~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~H 84 (119)
..|..|+++.++. .-..|| ||.+||+.+
T Consensus 162 ~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C 191 (220)
T 1dvp_A 162 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQC 191 (220)
T ss_dssp SBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred CccCCCCCccCCcccccccCCcCCEEChHH
Confidence 6899999988763 468999 999999854
No 15
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.21 E-value=0.13 Score=33.75 Aligned_cols=31 Identities=29% Similarity=0.773 Sum_probs=24.7
Q ss_pred cCCCcccccccccccc-cceeec-cCCcccCCC
Q psy11667 54 HKRSRCAQCNAKLTVC-SSFTCR-CRKLFCPRH 84 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~H 84 (119)
.....|..|.++.++. .-..|| ||.+||+..
T Consensus 12 ~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 44 (84)
T 1x4u_A 12 NNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRC 44 (84)
T ss_dssp CCCSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred CCCCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence 3445899999988763 368999 999999864
No 16
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=91.86 E-value=0.085 Score=34.77 Aligned_cols=30 Identities=23% Similarity=0.672 Sum_probs=24.2
Q ss_pred CCCcccccccccccc-cceeec-cCCcccCCC
Q psy11667 55 KRSRCAQCNAKLTVC-SSFTCR-CRKLFCPRH 84 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~H 84 (119)
....|..|+++.++. .-..|| ||.+||+..
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 51 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCGDC 51 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred CCCCCcCcCCccccchhcccccCCCcEEChHH
Confidence 455899999988763 368999 999999763
No 17
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=91.79 E-value=0.13 Score=39.39 Aligned_cols=29 Identities=28% Similarity=0.894 Sum_probs=23.9
Q ss_pred CCcccccccccccc-cceeec-cCCcccCCC
Q psy11667 56 RSRCAQCNAKLTVC-SSFTCR-CRKLFCPRH 84 (119)
Q Consensus 56 k~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~H 84 (119)
...|..|+++.++. .-..|| ||.+||..+
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C 194 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC 194 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence 35899999988774 368999 999999864
No 18
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=90.23 E-value=0.12 Score=34.49 Aligned_cols=29 Identities=34% Similarity=0.898 Sum_probs=23.7
Q ss_pred CCCcccccccccccc-cceeec-cCCcccCC
Q psy11667 55 KRSRCAQCNAKLTVC-SSFTCR-CRKLFCPR 83 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~ 83 (119)
....|..|.++.++. .-..|| ||.+||..
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~ 49 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGV 49 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGG
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCc
Confidence 345799999988874 468999 99999875
No 19
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=89.48 E-value=0.15 Score=36.41 Aligned_cols=40 Identities=25% Similarity=0.567 Sum_probs=26.9
Q ss_pred Ccccccccccccc-cceeec-cCCcccCC---CCCCCCCCCcccc
Q psy11667 57 SRCAQCNAKLTVC-SSFTCR-CRKLFCPR---HRHPEEHACTFDY 96 (119)
Q Consensus 57 ~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~---HR~pe~H~C~fDy 96 (119)
..|..|+.+..+. .-..|| ||.+||+. |+.+..--|..=|
T Consensus 20 ~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~ 64 (120)
T 1y02_A 20 PSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQ 64 (120)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHH
T ss_pred CcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHH
Confidence 5899999987763 468999 99999874 4666555565433
No 20
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=83.75 E-value=0.5 Score=37.79 Aligned_cols=41 Identities=22% Similarity=0.513 Sum_probs=27.3
Q ss_pred cCCCccccccccc-ccc-cceeec-cCCcccCCC--CCCCCCCCccccH
Q psy11667 54 HKRSRCAQCNAKL-TVC-SSFTCR-CRKLFCPRH--RHPEEHACTFDYK 97 (119)
Q Consensus 54 ~~k~RC~~C~kkl-~Ls-~~f~Cr-Cg~~FC~~H--R~pe~H~C~fDyk 97 (119)
.....|..|++.+ |+. .|++|+ ||.++|..- +.+ . |..+..
T Consensus 355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~--~-C~~~~~ 400 (406)
T 2vrw_B 355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP--P-CGRHGQ 400 (406)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC--C-C-----
T ss_pred CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC--C-CCCCch
Confidence 4557899999977 553 699999 999998764 444 3 876654
No 21
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=82.46 E-value=0.26 Score=39.60 Aligned_cols=28 Identities=21% Similarity=0.749 Sum_probs=0.0
Q ss_pred CCcccccccccccc-cceeec-cCCcccCC
Q psy11667 56 RSRCAQCNAKLTVC-SSFTCR-CRKLFCPR 83 (119)
Q Consensus 56 k~RC~~C~kkl~Ls-~~f~Cr-Cg~~FC~~ 83 (119)
...|..|+...++. ....|| ||.+||..
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~ 404 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRN 404 (434)
T ss_dssp ------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehh
Confidence 45799999987764 368999 99999864
No 22
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=75.08 E-value=1.9 Score=27.70 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=26.4
Q ss_pred CcCCCcccccccccccc--cceeec-cCCcccCCCCCC
Q psy11667 53 KHKRSRCAQCNAKLTVC--SSFTCR-CRKLFCPRHRHP 87 (119)
Q Consensus 53 ~~~k~RC~~C~kkl~Ls--~~f~Cr-Cg~~FC~~HR~p 87 (119)
+.-..+|..|+..+.+. ....|+ ||+-+--+-|-+
T Consensus 18 ~~v~Y~C~~Cg~~~~l~~~~~iRC~~CG~RILyK~Rt~ 55 (63)
T 3h0g_L 18 ATMIYLCADCGARNTIQAKEVIRCRECGHRVMYKMRTK 55 (63)
T ss_dssp -CCCCBCSSSCCBCCCCSSSCCCCSSSCCCCCBCCCCC
T ss_pred CCeEEECCCCCCeeecCCCCceECCCCCcEEEEEecCC
Confidence 35678999999988774 478998 988776666644
No 23
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=74.31 E-value=1.8 Score=30.53 Aligned_cols=26 Identities=23% Similarity=0.530 Sum_probs=18.9
Q ss_pred ccccccceeec-cCCcccCCCCCCCCCCCc
Q psy11667 65 KLTVCSSFTCR-CRKLFCPRHRHPEEHACT 93 (119)
Q Consensus 65 kl~Ls~~f~Cr-Cg~~FC~~HR~pe~H~C~ 93 (119)
.|.+ ..++|+ ||++| .-+....-.|+
T Consensus 62 ~L~v-~p~~C~~CG~~F--~~~~~kPsrCP 88 (105)
T 2gmg_A 62 VLLI-KPAQCRKCGFVF--KAEINIPSRCP 88 (105)
T ss_dssp EEEE-CCCBBTTTCCBC--CCCSSCCSSCS
T ss_pred EEEE-ECcChhhCcCee--cccCCCCCCCc
Confidence 4544 799999 99999 34555557776
No 24
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=72.32 E-value=1.4 Score=27.60 Aligned_cols=26 Identities=31% Similarity=0.787 Sum_probs=20.4
Q ss_pred cCCCcccccccccccc-cceeec-cCCc
Q psy11667 54 HKRSRCAQCNAKLTVC-SSFTCR-CRKL 79 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls-~~f~Cr-Cg~~ 79 (119)
.....|..|++++++. .+++|+ |+..
T Consensus 17 ~~~~~C~~Cg~~i~~gkq~~kC~dC~~~ 44 (61)
T 4b6d_A 17 IKPESCVPCGKRIKFGKLSLKCRDCRVV 44 (61)
T ss_dssp CSCEECTTTCCEECTTCEEEEESSSSCE
T ss_pred cCCcccccccCEEEEeeEeeECCCCCCe
Confidence 3457899999988763 689999 9754
No 25
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=70.91 E-value=1.4 Score=27.94 Aligned_cols=37 Identities=27% Similarity=0.709 Sum_probs=26.0
Q ss_pred cccccccccccccceeec-cCCcccCC---CCCCCCCCCcc
Q psy11667 58 RCAQCNAKLTVCSSFTCR-CRKLFCPR---HRHPEEHACTF 94 (119)
Q Consensus 58 RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~---HR~pe~H~C~f 94 (119)
.|+.|.+.+.....|.|. |+..||.. --+-.-|+|++
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPg 57 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPG 57 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSST
T ss_pred cccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcC
Confidence 599999988653459999 99999963 12223377764
No 26
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.63 E-value=6.9 Score=22.89 Aligned_cols=27 Identities=26% Similarity=0.539 Sum_probs=19.9
Q ss_pred cCCCcccccccccccccceeeccCCcccC
Q psy11667 54 HKRSRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
.....|..|...+.. ...-.||..||.
T Consensus 18 ~~~~~C~IC~~~~~~--p~~~~CgH~fC~ 44 (63)
T 2ysj_A 18 QEEVICPICLDILQK--PVTIDCGHNFCL 44 (63)
T ss_dssp CCCCBCTTTCSBCSS--CEECTTSSEECH
T ss_pred ccCCCCCcCCchhCC--eEEeCCCCcchH
Confidence 345689999886643 555689999985
No 27
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=66.78 E-value=2.7 Score=27.29 Aligned_cols=36 Identities=25% Similarity=0.630 Sum_probs=24.3
Q ss_pred cCCcCCCccccccccccc--ccceeec-cCCcccCCCCC
Q psy11667 51 KTKHKRSRCAQCNAKLTV--CSSFTCR-CRKLFCPRHRH 86 (119)
Q Consensus 51 ~~~~~k~RC~~C~kkl~L--s~~f~Cr-Cg~~FC~~HR~ 86 (119)
...+-...|..|+..+.+ .....|+ ||.-.--+.|-
T Consensus 23 ~~~~v~Y~C~~CG~~~e~~~~d~irCp~CG~RILyK~R~ 61 (70)
T 1twf_L 23 RTATLKYICAECSSKLSLSRTDAVRCKDCGHRILLKART 61 (70)
T ss_dssp --CCCCEECSSSCCEECCCTTSTTCCSSSCCCCCBCCCC
T ss_pred CCceEEEECCCCCCcceeCCCCCccCCCCCceEeEecCC
Confidence 335667799999998554 3577899 98855555553
No 28
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=66.06 E-value=2.7 Score=29.09 Aligned_cols=30 Identities=23% Similarity=0.727 Sum_probs=22.4
Q ss_pred CCcccccccccccccceeec-cCCcccCCCCCCCCC
Q psy11667 56 RSRCAQCNAKLTVCSSFTCR-CRKLFCPRHRHPEEH 90 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~HR~pe~H 90 (119)
..+|..|.....+ .-|- ||.++|+ |++..|
T Consensus 24 ~~~C~~C~~~~~~---W~CL~CG~vgCg--r~~~~H 54 (109)
T 3c5k_A 24 TQPCGDCGTIQEN---WVCLSCYQVYCG--RYINGH 54 (109)
T ss_dssp TCCCTTTCCCSSE---EEETTTCCEEEC--TTTTCH
T ss_pred CCcCccccCCCCe---eeeeecCccccC--CCcChH
Confidence 4689999986544 6699 9999998 455444
No 29
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=61.61 E-value=4.5 Score=25.79 Aligned_cols=27 Identities=15% Similarity=0.549 Sum_probs=21.5
Q ss_pred CcCCCcccccccccccccceeec-cCCcc
Q psy11667 53 KHKRSRCAQCNAKLTVCSSFTCR-CRKLF 80 (119)
Q Consensus 53 ~~~k~RC~~C~kkl~Ls~~f~Cr-Cg~~F 80 (119)
-.....|..|+..| +..|++|. |+...
T Consensus 32 ~~~pt~C~~C~~~l-~~qG~kC~~C~~~c 59 (72)
T 2fnf_X 32 RGGPGWCDLCGREV-LRQALRCANCKFTC 59 (72)
T ss_dssp CSSCCBCTTTSSBC-SSCCEECTTSSCEE
T ss_pred CCCCcchhhhhHHH-HhCcCccCCCCCee
Confidence 35567899999999 55899999 98763
No 30
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.32 E-value=12 Score=22.55 Aligned_cols=28 Identities=25% Similarity=0.609 Sum_probs=20.0
Q ss_pred cCCCcccccccccccccceeeccCCcccCC
Q psy11667 54 HKRSRCAQCNAKLTVCSSFTCRCRKLFCPR 83 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~ 83 (119)
.....|..|...+.- ...-.||..||..
T Consensus 17 ~~~~~C~IC~~~~~~--p~~~~CgH~fC~~ 44 (85)
T 2ecv_A 17 KEEVTCPICLELLTQ--PLSLDCGHSFCQA 44 (85)
T ss_dssp CCCCCCTTTCSCCSS--CBCCSSSCCBCTT
T ss_pred cCCCCCCCCCcccCC--ceeCCCCCHHHHH
Confidence 345689999987643 4455799999863
No 31
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=60.10 E-value=4.4 Score=34.21 Aligned_cols=41 Identities=17% Similarity=0.421 Sum_probs=28.4
Q ss_pred cCCCccccccccc-ccc-cceeec-cCCcccCCCCCCCCCCCccc
Q psy11667 54 HKRSRCAQCNAKL-TVC-SSFTCR-CRKLFCPRHRHPEEHACTFD 95 (119)
Q Consensus 54 ~~k~RC~~C~kkl-~Ls-~~f~Cr-Cg~~FC~~HR~pe~H~C~fD 95 (119)
.....|..|++.+ |+. .|++|+ ||..+|.+..-.- -.|...
T Consensus 527 ~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v-~~C~~~ 570 (587)
T 3ky9_A 527 EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV-PPCGRH 570 (587)
T ss_dssp SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS-CCC---
T ss_pred CCCcccccccccccccccCCcCCCCCCCccchhhhhcC-CCCCCC
Confidence 3456899999976 653 699999 9999887755433 378643
No 32
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=59.97 E-value=4.2 Score=25.27 Aligned_cols=31 Identities=23% Similarity=0.673 Sum_probs=23.3
Q ss_pred CCCcccccccccccc---cceeec---cCCcccCCCC
Q psy11667 55 KRSRCAQCNAKLTVC---SSFTCR---CRKLFCPRHR 85 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls---~~f~Cr---Cg~~FC~~HR 85 (119)
...+|..|+..+... +-..|+ |+..||..=.
T Consensus 5 ~~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~ 41 (60)
T 1wd2_A 5 NTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCL 41 (60)
T ss_dssp CCCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSC
T ss_pred cceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcC
Confidence 346899998877664 466898 9999997654
No 33
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.22 E-value=10 Score=22.60 Aligned_cols=27 Identities=26% Similarity=0.539 Sum_probs=19.7
Q ss_pred cCCCcccccccccccccceeeccCCcccC
Q psy11667 54 HKRSRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
.....|..|...+.. ...-.||..||.
T Consensus 18 ~~~~~C~IC~~~~~~--~~~~~CgH~fC~ 44 (73)
T 2ysl_A 18 QEEVICPICLDILQK--PVTIDCGHNFCL 44 (73)
T ss_dssp CCCCBCTTTCSBCSS--EEECTTCCEEEH
T ss_pred ccCCEeccCCcccCC--eEEcCCCChhhH
Confidence 345689999986643 445589999986
No 34
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.89 E-value=7.6 Score=25.77 Aligned_cols=36 Identities=33% Similarity=0.681 Sum_probs=29.0
Q ss_pred CcCCCcccccccccccc--cceeec-cCCcccCCCCCCC
Q psy11667 53 KHKRSRCAQCNAKLTVC--SSFTCR-CRKLFCPRHRHPE 88 (119)
Q Consensus 53 ~~~k~RC~~C~kkl~Ls--~~f~Cr-Cg~~FC~~HR~pe 88 (119)
.-..+.|..|.+.||+. .+..|+ |....|.+=|...
T Consensus 22 ~~~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~ 60 (76)
T 2csz_A 22 HYSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQE 60 (76)
T ss_dssp TCCCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEEC
T ss_pred CCCccchhhhCccccccccCCCcCcccChhhcccccccC
Confidence 34567999999999984 588999 9999998877543
No 35
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=58.65 E-value=1.9 Score=26.65 Aligned_cols=29 Identities=24% Similarity=0.482 Sum_probs=22.9
Q ss_pred ccCCcCCCcccccccccccccceeec-cCCc
Q psy11667 50 KKTKHKRSRCAQCNAKLTVCSSFTCR-CRKL 79 (119)
Q Consensus 50 ~~~~~~k~RC~~C~kkl~Ls~~f~Cr-Cg~~ 79 (119)
......+..|..|+.+++. ..-.|+ ||.+
T Consensus 8 e~r~~~k~iCpkC~a~~~~-gaw~CrKCG~~ 37 (51)
T 3j21_g 8 EARIFKKYVCLRCGATNPW-GAKKCRKCGYK 37 (51)
T ss_dssp HHHSSSEEECTTTCCEECT-TCSSCSSSSSC
T ss_pred HHHHhCCccCCCCCCcCCC-CceecCCCCCc
Confidence 3344567789999999877 778999 9987
No 36
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=57.42 E-value=4.2 Score=24.81 Aligned_cols=25 Identities=16% Similarity=0.567 Sum_probs=20.3
Q ss_pred cCCCcccccccccccccceeec-cCCc
Q psy11667 54 HKRSRCAQCNAKLTVCSSFTCR-CRKL 79 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~~f~Cr-Cg~~ 79 (119)
.....|..|++.| +..|++|. |+..
T Consensus 20 ~~pt~C~~C~~~i-~kqg~kC~~C~~~ 45 (59)
T 1rfh_A 20 GGPGWCDLCGREV-LRQALRCANCKFT 45 (59)
T ss_dssp SCCEECTTTCSEE-CSCCEECTTTSCE
T ss_pred CCCeEchhcchhh-hhCccEeCCCCCe
Confidence 4556899999999 55899999 8765
No 37
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=57.39 E-value=9.2 Score=24.62 Aligned_cols=31 Identities=29% Similarity=0.773 Sum_probs=24.0
Q ss_pred CcCCCccccccc-ccccccceeec-cCCcccCC
Q psy11667 53 KHKRSRCAQCNA-KLTVCSSFTCR-CRKLFCPR 83 (119)
Q Consensus 53 ~~~k~RC~~C~k-kl~Ls~~f~Cr-Cg~~FC~~ 83 (119)
+...+.|..|.| |.-.-.|..|. |...||++
T Consensus 6 ~~d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaR 38 (62)
T 2a20_A 6 KGDAPTCGICHKTKFADGCGHNCSYCQTKFCAR 38 (62)
T ss_dssp SSCCCCCSSSSCSCCCSSCCEEBTTTCCEECTT
T ss_pred cCCcchhhhhccceeccCCCccccccCCeeecc
Confidence 456789999998 54433588999 99999985
No 38
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=57.21 E-value=4.2 Score=23.59 Aligned_cols=24 Identities=33% Similarity=0.747 Sum_probs=19.2
Q ss_pred CCCcccccccccccccceeec-cCCcc
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCR-CRKLF 80 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~Cr-Cg~~F 80 (119)
....|..|++.|- .|++|+ |+..+
T Consensus 13 ~pt~C~~C~~~l~--qG~~C~~C~~~~ 37 (52)
T 1faq_A 13 KLAFCDICQKFLL--NGFRCQTCGYKF 37 (52)
T ss_dssp SCEECTTSSSEEC--SEEECTTTTCCB
T ss_pred CCcCCCCcccccc--cCCEeCCCCCeE
Confidence 4568999999775 699999 97664
No 39
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=56.81 E-value=2.9 Score=29.94 Aligned_cols=34 Identities=15% Similarity=0.482 Sum_probs=23.6
Q ss_pred CCcCCCccccccc-ccc-c-ccceeec-cCCcccCCCC
Q psy11667 52 TKHKRSRCAQCNA-KLT-V-CSSFTCR-CRKLFCPRHR 85 (119)
Q Consensus 52 ~~~~k~RC~~C~k-kl~-L-s~~f~Cr-Cg~~FC~~HR 85 (119)
.+..+..|.+|++ .+. . +.--+|+ |+.+|-+-=-
T Consensus 56 ~q~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAGGAy 93 (116)
T 3cc2_Z 56 EMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSY 93 (116)
T ss_dssp HHHSCEECSSSCCEEEEEEETTEEEETTTCCEEECCSS
T ss_pred HhccCCcCCCCCCceeEecCceeEECCCCCCEEECCCc
Confidence 4566789999998 221 1 1457899 9999977533
No 40
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=55.99 E-value=5.1 Score=28.16 Aligned_cols=26 Identities=23% Similarity=0.737 Sum_probs=20.2
Q ss_pred CCCcccccccccccccceeeccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
..-.|..|..-+.- +....||..||.
T Consensus 30 ~~~~C~IC~~~~~~--pv~~~CgH~FC~ 55 (141)
T 3knv_A 30 AKYLCSACRNVLRR--PFQAQCGHRYCS 55 (141)
T ss_dssp GGGBCTTTCSBCSS--EEECTTSCEEEH
T ss_pred cCcCCCCCChhhcC--cEECCCCCccCH
Confidence 45589999886644 677789999995
No 41
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=55.82 E-value=9.3 Score=23.60 Aligned_cols=33 Identities=27% Similarity=0.596 Sum_probs=22.4
Q ss_pred ccCCcCCCcccccccccccc-------------cceeec-cCCcccC
Q psy11667 50 KKTKHKRSRCAQCNAKLTVC-------------SSFTCR-CRKLFCP 82 (119)
Q Consensus 50 ~~~~~~k~RC~~C~kkl~Ls-------------~~f~Cr-Cg~~FC~ 82 (119)
.........|..|++..... ..|.|. |+..|-.
T Consensus 11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 57 (106)
T 2ee8_A 11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRR 57 (106)
T ss_dssp CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSC
T ss_pred CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCC
Confidence 33445567899998754310 268999 9998854
No 42
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=55.79 E-value=16 Score=21.97 Aligned_cols=27 Identities=22% Similarity=0.613 Sum_probs=19.6
Q ss_pred cCCCcccccccccccccceeeccCCcccC
Q psy11667 54 HKRSRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
.....|..|...+.- .....||..||.
T Consensus 17 ~~~~~C~IC~~~~~~--p~~~~CgH~fC~ 43 (85)
T 2ecw_A 17 KEEVTCPICLELLKE--PVSADCNHSFCR 43 (85)
T ss_dssp CTTTSCTTTCSCCSS--CEECTTSCCBCH
T ss_pred ccCCCCcCCChhhCc--ceeCCCCCHHHH
Confidence 345689999886543 556679999985
No 43
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.64 E-value=9.1 Score=23.02 Aligned_cols=49 Identities=16% Similarity=0.325 Sum_probs=30.1
Q ss_pred cCCCcccccccccccccceeeccCCcccCC---CCCCCCCCCccccHHhhHHHH
Q psy11667 54 HKRSRCAQCNAKLTVCSSFTCRCRKLFCPR---HRHPEEHACTFDYKAYGRHLL 104 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~---HR~pe~H~C~fDyk~~gr~~L 104 (119)
.....|..|...+.. ...-.||..||.. .-+.....|++--.....+.|
T Consensus 13 ~~~~~C~IC~~~~~~--~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 13 LTVPECAICLQTCVH--PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SSCCBCSSSSSBCSS--EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHH
T ss_pred CCCCCCccCCcccCC--CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhc
Confidence 345689999886643 4555799999853 223344678765554444433
No 44
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=54.70 E-value=3.6 Score=27.05 Aligned_cols=33 Identities=24% Similarity=0.536 Sum_probs=22.8
Q ss_pred cCCcCCCccccccc-ccc-cc-cceeec-cCCcccCC
Q psy11667 51 KTKHKRSRCAQCNA-KLT-VC-SSFTCR-CRKLFCPR 83 (119)
Q Consensus 51 ~~~~~k~RC~~C~k-kl~-Ls-~~f~Cr-Cg~~FC~~ 83 (119)
..+..+..|.+|++ +|. .+ .--+|+ |+.+|=.-
T Consensus 22 ~~q~~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AGG 58 (73)
T 1ffk_W 22 IKHKKKYKCPVCGFPKLKRASTSIWVCGHCGYKIAGG 58 (73)
T ss_pred HhcccCccCCCCCCceeEEEEeEEEECCCCCcEEECC
Confidence 34677889999997 332 11 346899 99988654
No 45
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=54.61 E-value=3.7 Score=18.87 Aligned_cols=11 Identities=27% Similarity=1.050 Sum_probs=7.4
Q ss_pred eeec-cCCcccC
Q psy11667 72 FTCR-CRKLFCP 82 (119)
Q Consensus 72 f~Cr-Cg~~FC~ 82 (119)
|.|. ||..|-.
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 6677 7777654
No 46
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=54.28 E-value=4.2 Score=18.92 Aligned_cols=11 Identities=27% Similarity=0.760 Sum_probs=8.0
Q ss_pred ceeec-cCCccc
Q psy11667 71 SFTCR-CRKLFC 81 (119)
Q Consensus 71 ~f~Cr-Cg~~FC 81 (119)
.|.|. ||..|-
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvh_A 3 PFSCSLCPQRSR 14 (27)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCcChhhC
Confidence 57788 877774
No 47
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=54.26 E-value=4.3 Score=18.84 Aligned_cols=12 Identities=25% Similarity=0.949 Sum_probs=8.7
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. ||..|-.
T Consensus 3 ~~~C~~C~~~f~~ 15 (30)
T 2m0d_A 3 PYQCDYCGRSFSD 15 (30)
T ss_dssp CEECTTTCCEESC
T ss_pred CccCCCCCcccCC
Confidence 57888 8887753
No 48
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=53.78 E-value=4.5 Score=18.84 Aligned_cols=12 Identities=33% Similarity=0.960 Sum_probs=9.0
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. ||..|-.
T Consensus 3 ~~~C~~C~k~f~~ 15 (28)
T 2kvf_A 3 PYSCSVCGKRFSL 15 (28)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCCCcccCC
Confidence 57888 8887754
No 49
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=53.55 E-value=4.2 Score=18.89 Aligned_cols=11 Identities=45% Similarity=1.253 Sum_probs=7.5
Q ss_pred ceeec-cCCccc
Q psy11667 71 SFTCR-CRKLFC 81 (119)
Q Consensus 71 ~f~Cr-Cg~~FC 81 (119)
.|.|. ||..|-
T Consensus 2 ~~~C~~C~~~f~ 13 (29)
T 1ard_A 2 SFVCEVCTRAFA 13 (29)
T ss_dssp CCBCTTTCCBCS
T ss_pred CeECCCCCcccC
Confidence 46777 777764
No 50
>1e0f_I Haemadin, factor IIA; coagulation//heparin-B, coagulation/crystal structure/heparin-binding site/ hirudin/thrombin inhibitor; 3.1A {Haemadipsa sylvestris} SCOP: g.3.15.2
Probab=53.53 E-value=6.3 Score=24.55 Aligned_cols=28 Identities=25% Similarity=0.567 Sum_probs=23.4
Q ss_pred cceeeccCCcccCCCCCCCCCCCccccH
Q psy11667 70 SSFTCRCRKLFCPRHRHPEEHACTFDYK 97 (119)
Q Consensus 70 ~~f~CrCg~~FC~~HR~pe~H~C~fDyk 97 (119)
.+|.|.||..+|.--.--.+-.|+.|-|
T Consensus 15 vgytcdcgekiclygqscndgqcsgdpk 42 (57)
T 1e0f_I 15 VGYTCDCGEKICLYGQSCNDGQCSGDPK 42 (57)
T ss_dssp CSSCEECSSSEECTTCCBSSSCBCSCCC
T ss_pred eeeeccCCceeeEecccccCCcccCCCC
Confidence 4889999999998888888888887754
No 51
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=53.10 E-value=6.9 Score=26.01 Aligned_cols=23 Identities=22% Similarity=0.920 Sum_probs=17.9
Q ss_pred Ccccccccc----cccccceeec-cCCcc
Q psy11667 57 SRCAQCNAK----LTVCSSFTCR-CRKLF 80 (119)
Q Consensus 57 ~RC~~C~kk----l~Ls~~f~Cr-Cg~~F 80 (119)
.+|..|++. ++| .+|.|. |+.++
T Consensus 39 s~C~vC~k~c~s~~~L-~g~rC~WCq~~V 66 (84)
T 1r79_A 39 AKCTVCDKTCGSVLRL-QDWRCLWCKAMV 66 (84)
T ss_dssp CBCSSSCCBCCCTTTC-CCEEESSSCCEE
T ss_pred CEeCCCCCEeCCccCC-CCCCCcccChhH
Confidence 589999886 456 799999 97763
No 52
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.93 E-value=7.6 Score=22.65 Aligned_cols=28 Identities=25% Similarity=0.682 Sum_probs=17.1
Q ss_pred cCCCccccccccccc-------------ccceeec-cCCccc
Q psy11667 54 HKRSRCAQCNAKLTV-------------CSSFTCR-CRKLFC 81 (119)
Q Consensus 54 ~~k~RC~~C~kkl~L-------------s~~f~Cr-Cg~~FC 81 (119)
.+...|..|.+.... ...|.|. |+..|-
T Consensus 12 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~ 53 (72)
T 1x6e_A 12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFS 53 (72)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEES
T ss_pred CCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccC
Confidence 445678888764321 0267887 777664
No 53
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=52.69 E-value=4.2 Score=19.15 Aligned_cols=11 Identities=27% Similarity=0.709 Sum_probs=8.2
Q ss_pred ceeec-cCCccc
Q psy11667 71 SFTCR-CRKLFC 81 (119)
Q Consensus 71 ~f~Cr-Cg~~FC 81 (119)
.|.|. ||..|-
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvg_A 3 PYRCPLCRAGCP 14 (27)
T ss_dssp TEEETTTTEEES
T ss_pred CcCCCCCCcccC
Confidence 57888 887774
No 54
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=52.64 E-value=5.1 Score=24.09 Aligned_cols=22 Identities=23% Similarity=0.685 Sum_probs=18.0
Q ss_pred Ccccccccccccccceeec-cCCcc
Q psy11667 57 SRCAQCNAKLTVCSSFTCR-CRKLF 80 (119)
Q Consensus 57 ~RC~~C~kkl~Ls~~f~Cr-Cg~~F 80 (119)
..|..|++.|- .|++|+ |+..+
T Consensus 15 t~C~~C~k~i~--~G~kC~~Ck~~c 37 (49)
T 1kbe_A 15 QVCNVCQKSMI--FGVKCKHCRLKC 37 (49)
T ss_dssp CCCSSSCCSSC--CEEEETTTTEEE
T ss_pred cCccccCceeE--CcCCCCCCCCcc
Confidence 57999999884 589999 98764
No 55
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=52.40 E-value=8.2 Score=22.55 Aligned_cols=29 Identities=24% Similarity=0.676 Sum_probs=19.5
Q ss_pred cCCCcccccccccccc-------------cceeec-cCCcccC
Q psy11667 54 HKRSRCAQCNAKLTVC-------------SSFTCR-CRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls-------------~~f~Cr-Cg~~FC~ 82 (119)
...-.|..|++..... ..|.|. |+..|-.
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~ 57 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNR 57 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCC
Confidence 4557899998754320 258898 8887754
No 56
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=51.93 E-value=9.2 Score=21.84 Aligned_cols=26 Identities=19% Similarity=0.510 Sum_probs=19.1
Q ss_pred cCCCcccccccccc-c-ccceeec-cCCc
Q psy11667 54 HKRSRCAQCNAKLT-V-CSSFTCR-CRKL 79 (119)
Q Consensus 54 ~~k~RC~~C~kkl~-L-s~~f~Cr-Cg~~ 79 (119)
..+..|..|++.|- | ..+++|+ |+..
T Consensus 9 ~~pt~C~~C~~~l~g~~~qg~~C~~C~~~ 37 (50)
T 1ptq_A 9 MSPTFCDHCGSLLWGLVKQGLKCEDCGMN 37 (50)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCCCcCCCCceeeccCCccCEeCCCCCe
Confidence 34568999999663 3 3799999 8765
No 57
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=56.91 E-value=3.1 Score=19.23 Aligned_cols=14 Identities=29% Similarity=0.840 Sum_probs=9.9
Q ss_pred ceeec-cCCcccCCC
Q psy11667 71 SFTCR-CRKLFCPRH 84 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~~H 84 (119)
.|.|. ||..|-...
T Consensus 2 p~~C~~C~k~f~~~~ 16 (26)
T 2lvu_A 2 PYVCERCGKRFVQSS 16 (26)
Confidence 47788 888876543
No 58
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=51.10 E-value=4.7 Score=18.94 Aligned_cols=12 Identities=25% Similarity=1.005 Sum_probs=8.5
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. ||..|-.
T Consensus 2 ~~~C~~C~k~f~~ 14 (30)
T 1paa_A 2 AYACGLCNRAFTR 14 (30)
T ss_dssp CSBCTTTCCBCSS
T ss_pred CcCCcccCcccCC
Confidence 47788 8887754
No 59
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=51.04 E-value=5 Score=18.49 Aligned_cols=12 Identities=42% Similarity=1.038 Sum_probs=8.2
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. ||..|-.
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 2m0f_A 2 PLKCRECGKQFTT 14 (29)
T ss_dssp CEECTTTSCEESC
T ss_pred CccCCCCCCccCC
Confidence 46787 8777753
No 60
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=50.44 E-value=7.6 Score=28.36 Aligned_cols=31 Identities=23% Similarity=0.593 Sum_probs=26.0
Q ss_pred CCCcccccccccccc--cceeec-cCCcccCCCC
Q psy11667 55 KRSRCAQCNAKLTVC--SSFTCR-CRKLFCPRHR 85 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls--~~f~Cr-Cg~~FC~~HR 85 (119)
....|..|.+.+++. .+..|. |...+|.+=+
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~ 100 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS 100 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc
Confidence 467999999988874 588999 9999998665
No 61
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=49.97 E-value=23 Score=21.48 Aligned_cols=27 Identities=19% Similarity=0.541 Sum_probs=19.8
Q ss_pred cCCCccccccccc-cc-ccceeec-cCCcc
Q psy11667 54 HKRSRCAQCNAKL-TV-CSSFTCR-CRKLF 80 (119)
Q Consensus 54 ~~k~RC~~C~kkl-~L-s~~f~Cr-Cg~~F 80 (119)
..+..|..|++.| || -.+++|+ |+..+
T Consensus 21 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~ 50 (65)
T 2enz_A 21 KSPTFCEHCGTLLWGLARQGLKCDACGMNV 50 (65)
T ss_dssp CSCCBCSSSCCBCCCSSSCSEEESSSCCEE
T ss_pred CCCcCchhcChhheecCCcccccCCCCCcc
Confidence 3456899999965 33 2799999 98764
No 62
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=49.78 E-value=7.7 Score=27.67 Aligned_cols=32 Identities=28% Similarity=0.706 Sum_probs=25.5
Q ss_pred CCCcccccccccccc--cceeec-cCCcccCCCCC
Q psy11667 55 KRSRCAQCNAKLTVC--SSFTCR-CRKLFCPRHRH 86 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls--~~f~Cr-Cg~~FC~~HR~ 86 (119)
....|..|.+.+|+. .+..|. |...+|.+=+.
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 456899999999863 478999 99999986444
No 63
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=49.77 E-value=5.4 Score=18.51 Aligned_cols=12 Identities=42% Similarity=0.974 Sum_probs=8.5
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. ||..|-.
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 1rik_A 2 KFACPECPKRFMR 14 (29)
T ss_dssp CEECSSSSCEESC
T ss_pred CccCCCCCchhCC
Confidence 47788 8877754
No 64
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.67 E-value=9.5 Score=24.49 Aligned_cols=27 Identities=19% Similarity=0.591 Sum_probs=20.0
Q ss_pred cCCCcccccccccc-c-ccceeec-cCCcc
Q psy11667 54 HKRSRCAQCNAKLT-V-CSSFTCR-CRKLF 80 (119)
Q Consensus 54 ~~k~RC~~C~kkl~-L-s~~f~Cr-Cg~~F 80 (119)
.....|..|++.|- | ..+++|. |+..+
T Consensus 26 ~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~ 55 (83)
T 2yuu_A 26 GQPTFCSVCKDFVWGLNKQGYKCRQCNAAI 55 (83)
T ss_dssp SSCCCCSSSCCCCCSSSCCEEEETTTCCEE
T ss_pred CCCcChhhcChhhccccccccccCCcCCee
Confidence 34568999999663 3 2699999 98774
No 65
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=49.61 E-value=5.7 Score=18.20 Aligned_cols=12 Identities=33% Similarity=0.780 Sum_probs=7.9
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. ||..|..
T Consensus 2 ~~~C~~C~~~f~~ 14 (29)
T 2m0e_A 2 EHKCPHCDKKFNQ 14 (29)
T ss_dssp CCCCSSCCCCCCT
T ss_pred CCcCCCCCcccCC
Confidence 46677 7777654
No 66
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=49.35 E-value=4.8 Score=18.65 Aligned_cols=12 Identities=17% Similarity=0.639 Sum_probs=7.8
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. ||..|-.
T Consensus 2 ~~~C~~C~k~f~~ 14 (30)
T 1klr_A 2 TYQCQYCEFRSAD 14 (30)
T ss_dssp CCCCSSSSCCCSC
T ss_pred CccCCCCCCccCC
Confidence 46777 7776643
No 67
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.29 E-value=13 Score=22.84 Aligned_cols=26 Identities=27% Similarity=0.701 Sum_probs=19.0
Q ss_pred CCCcccccccccccccceeeccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
....|..|...+.. ...-.||..||.
T Consensus 14 ~~~~C~IC~~~~~~--p~~~~CgH~fC~ 39 (81)
T 2csy_A 14 IPFRCFICRQAFQN--PVVTKCRHYFCE 39 (81)
T ss_dssp CCSBCSSSCSBCCS--EEECTTSCEEEH
T ss_pred CCCCCcCCCchhcC--eeEccCCCHhHH
Confidence 35689999887643 555569999985
No 68
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=49.13 E-value=6.3 Score=25.90 Aligned_cols=30 Identities=30% Similarity=0.749 Sum_probs=20.5
Q ss_pred CcCCCcccccccc-cc-cccc-eeec-cCCcccC
Q psy11667 53 KHKRSRCAQCNAK-LT-VCSS-FTCR-CRKLFCP 82 (119)
Q Consensus 53 ~~~k~RC~~C~kk-l~-Ls~~-f~Cr-Cg~~FC~ 82 (119)
+..+..|.+|++. +. .+.+ -+|+ |+.+|=.
T Consensus 23 q~~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AG 56 (72)
T 3jyw_9 23 QHARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAG 56 (72)
T ss_dssp HHSCBCCSSCCSSCBSBCSSSCBCCSSSCCCCCC
T ss_pred hccCccCCCCCCceeEecCCCeEECCCCCCEEeC
Confidence 4567899999863 22 1234 4899 9998854
No 69
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=48.53 E-value=4.8 Score=26.83 Aligned_cols=35 Identities=17% Similarity=0.475 Sum_probs=24.7
Q ss_pred CcCCCccccccccccc---ccceeec-cCCcccCCCCCC
Q psy11667 53 KHKRSRCAQCNAKLTV---CSSFTCR-CRKLFCPRHRHP 87 (119)
Q Consensus 53 ~~~k~RC~~C~kkl~L---s~~f~Cr-Cg~~FC~~HR~p 87 (119)
+..+..|.+|++.+.. +.-.+|. ||.+|-.-=-.+
T Consensus 24 q~~~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~aggay~~ 62 (83)
T 1vq8_Z 24 MNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKP 62 (83)
T ss_dssp HHSCEECSSSCCEEEEEEETTEEEETTTCCEEECCSSSS
T ss_pred ccccCcCCCCCCcceeccCCCeEECCCCCCEecCCEecc
Confidence 4557799999985433 1357899 999998764444
No 70
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=48.43 E-value=15 Score=22.24 Aligned_cols=28 Identities=18% Similarity=0.488 Sum_probs=20.8
Q ss_pred cCCCcccccccccccccceeec-cCCcccCC
Q psy11667 54 HKRSRCAQCNAKLTVCSSFTCR-CRKLFCPR 83 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~ 83 (119)
...-.|..|...+.. ...-. ||..||..
T Consensus 13 ~~~~~C~IC~~~~~~--p~~~~~CgH~fC~~ 41 (74)
T 2yur_A 13 PDELLCLICKDIMTD--AVVIPCCGNSYCDE 41 (74)
T ss_dssp CGGGSCSSSCCCCTT--CEECSSSCCEECTT
T ss_pred CCCCCCcCCChHHhC--CeEcCCCCCHHHHH
Confidence 345689999876543 66677 99999963
No 71
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=47.85 E-value=6.1 Score=26.63 Aligned_cols=32 Identities=19% Similarity=0.679 Sum_probs=21.7
Q ss_pred CCcCCCcccccccc-cc-cccc-eeec-cCCcccCC
Q psy11667 52 TKHKRSRCAQCNAK-LT-VCSS-FTCR-CRKLFCPR 83 (119)
Q Consensus 52 ~~~~k~RC~~C~kk-l~-Ls~~-f~Cr-Cg~~FC~~ 83 (119)
.+..+..|.+|++. +. .+.+ .+|+ |+.+|=.-
T Consensus 31 ~q~~ky~CpfCGk~~vkR~a~GIW~C~kCg~~~AGG 66 (83)
T 3j21_i 31 KMRQKHTCPVCGRKAVKRISTGIWQCQKCGATFAGG 66 (83)
T ss_dssp HHHSCBCCSSSCSSCEEEEETTEEEETTTCCEEECC
T ss_pred HhhcccCCCCCCCceeEecCcCeEEcCCCCCEEeCC
Confidence 34567899999874 22 1233 4999 99998654
No 72
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.83 E-value=17 Score=20.47 Aligned_cols=26 Identities=23% Similarity=0.571 Sum_probs=19.2
Q ss_pred CCCcccccccccccccceeeccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
....|..|...+.. ...-.||..||.
T Consensus 14 ~~~~C~IC~~~~~~--p~~~~CgH~fC~ 39 (58)
T 2ecj_A 14 VEASCSVCLEYLKE--PVIIECGHNFCK 39 (58)
T ss_dssp CCCBCSSSCCBCSS--CCCCSSCCCCCH
T ss_pred cCCCCccCCcccCc--cEeCCCCCccCH
Confidence 45689999887654 455579999985
No 73
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=47.68 E-value=11 Score=22.95 Aligned_cols=26 Identities=19% Similarity=0.576 Sum_probs=19.2
Q ss_pred cCCCccccccccc-ccc-cceeec-cCCc
Q psy11667 54 HKRSRCAQCNAKL-TVC-SSFTCR-CRKL 79 (119)
Q Consensus 54 ~~k~RC~~C~kkl-~Ls-~~f~Cr-Cg~~ 79 (119)
.....|..|++.| ||. .+++|. |+..
T Consensus 18 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 46 (65)
T 3uej_A 18 MSPTFCDHCGSLLWGLVKQGLKCEDCGMN 46 (65)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCCcccccChhhhccCceeeECCCCCCe
Confidence 3456899999965 443 699999 8765
No 74
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=46.88 E-value=6.5 Score=19.17 Aligned_cols=13 Identities=38% Similarity=0.933 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 6 k~~~C~~C~k~f~~ 19 (35)
T 2elx_A 6 SGYVCALCLKKFVS 19 (35)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeECCCCcchhCC
Confidence 367888 8777743
No 75
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=52.15 E-value=4.2 Score=19.11 Aligned_cols=13 Identities=31% Similarity=0.700 Sum_probs=9.4
Q ss_pred ceeec-cCCcccCC
Q psy11667 71 SFTCR-CRKLFCPR 83 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~~ 83 (119)
.|.|. ||..|-..
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 2lvt_A 2 PCQCVMCGKAFTQA 15 (29)
Confidence 47788 88887654
No 76
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.80 E-value=11 Score=23.57 Aligned_cols=10 Identities=20% Similarity=0.600 Sum_probs=4.7
Q ss_pred cCCcccCCCC
Q psy11667 76 CRKLFCPRHR 85 (119)
Q Consensus 76 Cg~~FC~~HR 85 (119)
=|..||..|-
T Consensus 63 ~g~~yC~~~y 72 (82)
T 2co8_A 63 DGHFYCLQHL 72 (82)
T ss_dssp TCCCEETTTC
T ss_pred CCEEEChHHH
Confidence 3445555443
No 77
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.56 E-value=6.8 Score=19.47 Aligned_cols=13 Identities=23% Similarity=0.603 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 8 k~~~C~~C~k~f~~ 21 (36)
T 2elq_A 8 KPFKCSLCEYATRS 21 (36)
T ss_dssp CSEECSSSSCEESC
T ss_pred CCccCCCCCchhCC
Confidence 468888 8877754
No 78
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=45.27 E-value=7.1 Score=19.18 Aligned_cols=13 Identities=38% Similarity=0.979 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 6 k~~~C~~C~k~f~~ 19 (35)
T 1srk_A 6 RPFVCRICLSAFTT 19 (35)
T ss_dssp SCEECSSSCCEESS
T ss_pred cCeeCCCCCcccCC
Confidence 367888 8877754
No 79
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=44.81 E-value=6.9 Score=19.50 Aligned_cols=13 Identities=31% Similarity=0.925 Sum_probs=8.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 10 k~~~C~~C~k~f~~ 23 (37)
T 1p7a_A 10 KPFQCPDCDRSFSR 23 (37)
T ss_dssp SSBCCTTTCCCBSS
T ss_pred CCccCCCCCcccCc
Confidence 367787 7777643
No 80
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.51 E-value=7.3 Score=19.33 Aligned_cols=13 Identities=46% Similarity=0.945 Sum_probs=9.0
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 8 k~~~C~~C~k~f~~ 21 (36)
T 2els_A 8 KIFTCEYCNKVFKF 21 (36)
T ss_dssp CCEECTTTCCEESS
T ss_pred CCEECCCCCceeCC
Confidence 367787 8877754
No 81
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.08 E-value=7.6 Score=19.27 Aligned_cols=13 Identities=23% Similarity=0.738 Sum_probs=8.9
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 8 k~~~C~~C~k~f~~ 21 (36)
T 2elv_A 8 LLYDCHICERKFKN 21 (36)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCeECCCCCCccCC
Confidence 367888 8777643
No 82
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=43.75 E-value=7.1 Score=26.78 Aligned_cols=31 Identities=19% Similarity=0.530 Sum_probs=21.4
Q ss_pred CcCCCcccccccc-cc-cccc-eeec-cCCcccCC
Q psy11667 53 KHKRSRCAQCNAK-LT-VCSS-FTCR-CRKLFCPR 83 (119)
Q Consensus 53 ~~~k~RC~~C~kk-l~-Ls~~-f~Cr-Cg~~FC~~ 83 (119)
+..+..|.+|++. +. .+.| -+|+ |+.+|=+-
T Consensus 33 q~~ky~CpfCgk~~vkR~a~GIW~C~~Cg~~~AGG 67 (92)
T 3iz5_m 33 QHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGG 67 (92)
T ss_dssp HHSCBCCTTTCSSCBEEEETTEEECSSSCCEEECC
T ss_pred HhccccCcccCCCeeEecCcceEEcCCCCCEEeCC
Confidence 4567899999973 22 1234 4999 99998664
No 83
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=43.67 E-value=14 Score=23.67 Aligned_cols=29 Identities=21% Similarity=0.612 Sum_probs=19.5
Q ss_pred cCCCcccccccccccc-------------cceeec-cCCcccC
Q psy11667 54 HKRSRCAQCNAKLTVC-------------SSFTCR-CRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls-------------~~f~Cr-Cg~~FC~ 82 (119)
.+.-.|..|++..... ..|.|. |+..|-.
T Consensus 26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~ 68 (85)
T 2lv2_A 26 AECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYS 68 (85)
T ss_dssp CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESS
T ss_pred CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCC
Confidence 4456799998753321 278998 9888854
No 84
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.41 E-value=7.7 Score=19.10 Aligned_cols=13 Identities=15% Similarity=0.498 Sum_probs=8.8
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 8 k~~~C~~C~k~f~~ 21 (36)
T 2elt_A 8 KPYKCPQCSYASAI 21 (36)
T ss_dssp CSEECSSSSCEESS
T ss_pred CCCCCCCCCcccCC
Confidence 367788 7777643
No 85
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=43.39 E-value=15 Score=22.88 Aligned_cols=27 Identities=19% Similarity=0.543 Sum_probs=19.9
Q ss_pred cCCCcccccccccccccceeec-cCCcccC
Q psy11667 54 HKRSRCAQCNAKLTVCSSFTCR-CRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~ 82 (119)
...-.|..|...+. ....-. ||.+||.
T Consensus 11 ~~~~~C~IC~~~~~--~p~~~~~CgH~fC~ 38 (92)
T 3ztg_A 11 PDELLCLICKDIMT--DAVVIPCCGNSYCD 38 (92)
T ss_dssp CTTTEETTTTEECS--SCEECTTTCCEECH
T ss_pred CcCCCCCCCChhhc--CceECCCCCCHHHH
Confidence 34568999987654 366677 9999986
No 86
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.16 E-value=7 Score=19.85 Aligned_cols=13 Identities=15% Similarity=0.419 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|+|. ||..|-.
T Consensus 8 k~~~C~~C~k~f~~ 21 (37)
T 2elm_A 8 HLYYCSQCHYSSIT 21 (37)
T ss_dssp CEEECSSSSCEEEC
T ss_pred cCeECCCCCcccCC
Confidence 368888 8888754
No 87
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.90 E-value=7.9 Score=24.29 Aligned_cols=29 Identities=28% Similarity=0.686 Sum_probs=17.6
Q ss_pred cCCCcccccccccc-c--------------ccceeec-cCCcccC
Q psy11667 54 HKRSRCAQCNAKLT-V--------------CSSFTCR-CRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~-L--------------s~~f~Cr-Cg~~FC~ 82 (119)
.....|..|++... . ...|.|. |+..|-.
T Consensus 22 ~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~ 66 (98)
T 2gqj_A 22 RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKS 66 (98)
T ss_dssp TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSC
T ss_pred CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCC
Confidence 34567888887654 1 0257777 7766643
No 88
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=42.65 E-value=6.2 Score=19.45 Aligned_cols=12 Identities=42% Similarity=1.002 Sum_probs=8.6
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. ||..|-.
T Consensus 2 p~~C~~C~k~f~~ 14 (32)
T 2kfq_A 2 AFACPACPKRFMR 14 (32)
T ss_dssp CSSSSSSCTTHHH
T ss_pred CCCCCCCCcccCC
Confidence 47788 8887754
No 89
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=42.58 E-value=22 Score=20.56 Aligned_cols=38 Identities=21% Similarity=0.418 Sum_probs=25.9
Q ss_pred CCcccccccccccccceeeccCCcccCCCCCCCCCCCccc
Q psy11667 56 RSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFD 95 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~CrCg~~FC~~HR~pe~H~C~fD 95 (119)
.-.|..|...+.. ...=.||..||..-.......|++-
T Consensus 6 ~~~C~IC~~~~~~--p~~l~CgH~fC~~Ci~~~~~~CP~C 43 (56)
T 1bor_A 6 FLRCQQCQAEAKC--PKLLPCLHTLCSGCLEASGMQCPIC 43 (56)
T ss_dssp CSSCSSSCSSCBC--CSCSTTSCCSBTTTCSSSSSSCSSC
T ss_pred CCCceEeCCccCC--eEEcCCCCcccHHHHccCCCCCCcC
Confidence 4579999875543 4444599999987665556677754
No 90
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=42.51 E-value=26 Score=20.40 Aligned_cols=30 Identities=23% Similarity=0.757 Sum_probs=19.1
Q ss_pred CcCCCccccccccccc-------------ccceeec-cCCcccC
Q psy11667 53 KHKRSRCAQCNAKLTV-------------CSSFTCR-CRKLFCP 82 (119)
Q Consensus 53 ~~~k~RC~~C~kkl~L-------------s~~f~Cr-Cg~~FC~ 82 (119)
..+.-.|..|++.... ...|.|. |+..|-.
T Consensus 15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 58 (77)
T 2cot_A 15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQ 58 (77)
T ss_dssp CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESS
T ss_pred CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCC
Confidence 3456789889875431 0257888 8777643
No 91
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=48.43 E-value=5.3 Score=18.65 Aligned_cols=13 Identities=23% Similarity=0.887 Sum_probs=9.7
Q ss_pred ceeec-cCCcccCC
Q psy11667 71 SFTCR-CRKLFCPR 83 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~~ 83 (119)
.|.|. ||..|-..
T Consensus 3 ~~~C~~C~k~f~~~ 16 (30)
T 2lvr_A 3 PYVCIHCQRQFADP 16 (30)
Confidence 57888 88887654
No 92
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.10 E-value=24 Score=21.49 Aligned_cols=29 Identities=17% Similarity=0.386 Sum_probs=19.3
Q ss_pred cCCCccccccccccccc--ceeeccCCcccC
Q psy11667 54 HKRSRCAQCNAKLTVCS--SFTCRCRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~--~f~CrCg~~FC~ 82 (119)
.....|..|...+.... ...-.||..||.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~ 43 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICR 43 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEH
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhH
Confidence 34567999987654311 344569999986
No 93
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.01 E-value=8.3 Score=19.25 Aligned_cols=13 Identities=23% Similarity=0.682 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 8 k~~~C~~C~k~f~~ 21 (37)
T 2elp_A 8 RAMKCPYCDFYFMK 21 (37)
T ss_dssp CCEECSSSSCEECS
T ss_pred CCeECCCCChhhcc
Confidence 368888 8888754
No 94
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.88 E-value=7.2 Score=19.42 Aligned_cols=13 Identities=38% Similarity=0.994 Sum_probs=9.0
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 8 k~~~C~~C~k~f~~ 21 (37)
T 2elo_A 8 RSYSCPVCEKSFSE 21 (37)
T ss_dssp CCCEETTTTEECSS
T ss_pred CCcCCCCCCCccCC
Confidence 467888 8777743
No 95
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.00 E-value=8.4 Score=18.94 Aligned_cols=12 Identities=33% Similarity=0.764 Sum_probs=7.7
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. |+..|-.
T Consensus 9 ~~~C~~C~k~f~~ 21 (36)
T 2elr_A 9 THLCDMCGKKFKS 21 (36)
T ss_dssp SCBCTTTCCBCSS
T ss_pred CeecCcCCCCcCc
Confidence 56777 7766643
No 96
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=40.96 E-value=11 Score=26.40 Aligned_cols=26 Identities=27% Similarity=0.607 Sum_probs=19.5
Q ss_pred CCCcccccccccccccceee-ccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTC-RCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~C-rCg~~FC~ 82 (119)
..-.|..|...+.. .... .||..||.
T Consensus 53 ~~~~C~IC~~~~~~--p~~~~~CgH~fC~ 79 (165)
T 2ckl_B 53 SELMCPICLDMLKN--TMTTKECLHRFCA 79 (165)
T ss_dssp HHHBCTTTSSBCSS--EEEETTTCCEEEH
T ss_pred CCCCCcccChHhhC--cCEeCCCCChhHH
Confidence 34589999876643 6667 69999996
No 97
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=40.83 E-value=11 Score=24.47 Aligned_cols=26 Identities=38% Similarity=0.697 Sum_probs=19.1
Q ss_pred CCCcccccccccccccceeec-cCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCR-CRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~ 82 (119)
..-.|..|...+.- ...|- ||..||.
T Consensus 21 ~~~~C~IC~~~~~~--p~~~~~CgH~FC~ 47 (100)
T 3lrq_A 21 EVFRCFICMEKLRD--ARLCPHCSKLCCF 47 (100)
T ss_dssp HHTBCTTTCSBCSS--EEECTTTCCEEEH
T ss_pred CCCCCccCCccccC--ccccCCCCChhhH
Confidence 34579999887643 66655 9999985
No 98
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=40.71 E-value=22 Score=22.07 Aligned_cols=30 Identities=30% Similarity=0.637 Sum_probs=20.4
Q ss_pred CcCCCcccccccccccc-----------cceeec-cCCcccC
Q psy11667 53 KHKRSRCAQCNAKLTVC-----------SSFTCR-CRKLFCP 82 (119)
Q Consensus 53 ~~~k~RC~~C~kkl~Ls-----------~~f~Cr-Cg~~FC~ 82 (119)
....-+|..|.+..... ..|.|. |+..|-.
T Consensus 13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~ 54 (107)
T 1wjp_A 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFS 54 (107)
T ss_dssp CCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSS
T ss_pred CCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCC
Confidence 34457899998765321 258899 9988854
No 99
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=40.48 E-value=8.6 Score=26.38 Aligned_cols=32 Identities=28% Similarity=0.692 Sum_probs=21.7
Q ss_pred CCcCCCcccccccc-cc-cccc-eeec-cCCcccCC
Q psy11667 52 TKHKRSRCAQCNAK-LT-VCSS-FTCR-CRKLFCPR 83 (119)
Q Consensus 52 ~~~~k~RC~~C~kk-l~-Ls~~-f~Cr-Cg~~FC~~ 83 (119)
.+..+..|.+|++. +. .+.| -+|+ |+.+|=+-
T Consensus 32 ~q~~ky~CpfCgk~~vkR~a~GIW~C~~C~~~~AGG 67 (92)
T 3izc_m 32 QQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAGG 67 (92)
T ss_dssp HHHSCCCCSSSCSSCCEEEETTEEECTTTCCEEECC
T ss_pred HHhcCCcCCCCCCceeeecccceEEcCCCCCEEeCC
Confidence 34667899999863 22 1234 4999 99998664
No 100
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=40.43 E-value=12 Score=24.38 Aligned_cols=38 Identities=18% Similarity=0.435 Sum_probs=24.2
Q ss_pred CCcccccccccccccceee-ccCCcccCC---CCCCCCCCCccc
Q psy11667 56 RSRCAQCNAKLTVCSSFTC-RCRKLFCPR---HRHPEEHACTFD 95 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~C-rCg~~FC~~---HR~pe~H~C~fD 95 (119)
.-.|..|...+. ..... .||..||.. ..+.....|+.-
T Consensus 15 ~~~C~IC~~~~~--~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~C 56 (108)
T 2ckl_A 15 HLMCVLCGGYFI--DATTIIECLHSFCKTCIVRYLETSKYCPIC 56 (108)
T ss_dssp GTBCTTTSSBCS--SEEEETTTCCEEEHHHHHHHHTSCSBCTTT
T ss_pred cCCCccCChHHh--CcCEeCCCCChhhHHHHHHHHHhCCcCcCC
Confidence 457999987654 36777 799999852 122233567643
No 101
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=40.18 E-value=11 Score=21.66 Aligned_cols=27 Identities=22% Similarity=0.636 Sum_probs=17.3
Q ss_pred CCCcccccccccc----c------ccceeec-cCCccc
Q psy11667 55 KRSRCAQCNAKLT----V------CSSFTCR-CRKLFC 81 (119)
Q Consensus 55 ~k~RC~~C~kkl~----L------s~~f~Cr-Cg~~FC 81 (119)
....|..|++... | ...|.|. ||..|-
T Consensus 13 k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVE 50 (62)
T ss_dssp SEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCE
T ss_pred CCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccc
Confidence 3467888887421 1 1368888 888774
No 102
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.83 E-value=13 Score=21.35 Aligned_cols=11 Identities=18% Similarity=0.824 Sum_probs=7.4
Q ss_pred CCCcccccccc
Q psy11667 55 KRSRCAQCNAK 65 (119)
Q Consensus 55 ~k~RC~~C~kk 65 (119)
+...|..|++.
T Consensus 8 ~~~~C~~C~k~ 18 (70)
T 1x5w_A 8 HPEKCSECSYS 18 (70)
T ss_dssp CSEECSSSSCE
T ss_pred CCeECCCCCcc
Confidence 45678888764
No 103
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=39.79 E-value=17 Score=21.82 Aligned_cols=26 Identities=23% Similarity=0.577 Sum_probs=19.0
Q ss_pred CCCcccccccccccccceeeccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
....|..|...+.. .....||..||.
T Consensus 11 ~~~~C~IC~~~~~~--p~~l~CgH~fC~ 36 (79)
T 2egp_A 11 EEVTCPICLELLTE--PLSLDCGHSLCR 36 (79)
T ss_dssp CCCEETTTTEECSS--CCCCSSSCCCCH
T ss_pred cCCCCcCCCcccCC--eeECCCCCHHHH
Confidence 35689999886543 555679999985
No 104
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=39.47 E-value=11 Score=23.89 Aligned_cols=28 Identities=25% Similarity=0.674 Sum_probs=19.7
Q ss_pred CCCcccccccccccc--cceeeccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVC--SSFTCRCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls--~~f~CrCg~~FC~ 82 (119)
....|..|-..+.+. ..+.|.||+.||.
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~~CGH~fC~ 39 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPCTCGYQICR 39 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSSTTSCCCCH
T ss_pred cCCcCCccCccCccccccccccCCCCCcCH
Confidence 345799998876442 2455889999984
No 105
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.11 E-value=26 Score=21.77 Aligned_cols=25 Identities=24% Similarity=0.749 Sum_probs=20.0
Q ss_pred CCCcccccccccccccceeec-cCCcccCC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCR-CRKLFCPR 83 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~ 83 (119)
....|.+|+. . ..|.|- |+..||+.
T Consensus 11 ~~~~C~vC~~-~---~kY~CPrC~~~yCSl 36 (56)
T 2yqq_A 11 STVVCVICLE-K---PKYRCPACRVPYCSV 36 (56)
T ss_dssp CCCCCTTTCS-C---CSEECTTTCCEESSH
T ss_pred CCCccCcCcC-C---CeeeCCCCCCCeeCH
Confidence 3347999998 3 479999 99999984
No 106
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=38.74 E-value=14 Score=23.31 Aligned_cols=31 Identities=23% Similarity=0.567 Sum_probs=23.8
Q ss_pred ccccCCcCCCcccccccccccccceeec-cCCc
Q psy11667 48 CVKKTKHKRSRCAQCNAKLTVCSSFTCR-CRKL 79 (119)
Q Consensus 48 ~~~~~~~~k~RC~~C~kkl~Ls~~f~Cr-Cg~~ 79 (119)
...+..-.+.-|..|..++.. ..-.|| ||..
T Consensus 11 lA~k~~~~k~ICrkC~ARnp~-~A~~CRKCg~~ 42 (56)
T 2ayj_A 11 IVQQRVFLKKVCRKCGALNPI-RATKCRRCHST 42 (56)
T ss_dssp TTTTCSCCCEEETTTCCEECT-TCSSCTTTCCC
T ss_pred HHHHHHhchhhhccccCcCCc-ccccccCCCCC
Confidence 345556667789999999998 788999 8743
No 107
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=38.68 E-value=12 Score=23.82 Aligned_cols=38 Identities=16% Similarity=0.428 Sum_probs=24.0
Q ss_pred CCcccccccccccccceee-ccCCcccCC---CCCCCCCCCccc
Q psy11667 56 RSRCAQCNAKLTVCSSFTC-RCRKLFCPR---HRHPEEHACTFD 95 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~C-rCg~~FC~~---HR~pe~H~C~fD 95 (119)
.-.|..|...+.. .... .||..||.. .-+.....|+.-
T Consensus 22 ~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~~~CP~C 63 (99)
T 2y43_A 22 LLRCGICFEYFNI--AMIIPQCSHNYCSLCIRKFLSYKTQCPTC 63 (99)
T ss_dssp HTBCTTTCSBCSS--EEECTTTCCEEEHHHHHHHHTTCCBCTTT
T ss_pred CCCcccCChhhCC--cCEECCCCCHhhHHHHHHHHHCCCCCCCC
Confidence 4589999876643 5566 699999862 112233567643
No 108
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=38.56 E-value=12 Score=23.72 Aligned_cols=27 Identities=19% Similarity=0.631 Sum_probs=19.8
Q ss_pred cCCCccccccccc-cc-ccceeec-cCCcc
Q psy11667 54 HKRSRCAQCNAKL-TV-CSSFTCR-CRKLF 80 (119)
Q Consensus 54 ~~k~RC~~C~kkl-~L-s~~f~Cr-Cg~~F 80 (119)
..+..|..|++.| || ..+++|. |+..+
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 61 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQCNAAI 61 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSSSCCEE
T ss_pred CCCcCccccChhhccccccccCcCCCCCcC
Confidence 3456899999965 33 3699999 98764
No 109
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=38.51 E-value=14 Score=25.38 Aligned_cols=26 Identities=27% Similarity=0.824 Sum_probs=19.6
Q ss_pred cccccccccccccceeec-cCCcccCCCCCC
Q psy11667 58 RCAQCNAKLTVCSSFTCR-CRKLFCPRHRHP 87 (119)
Q Consensus 58 RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~HR~p 87 (119)
+|..|++.. .|.|. |...||..|...
T Consensus 60 ~C~~C~k~~----~~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 60 QCDECSSAA----VSFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp BCTTTCSBC----CEECSSSSCEECTTTCTT
T ss_pred CCCcCCCCC----CcCcCCCCcchhhhccCC
Confidence 455576653 48899 999999998754
No 110
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=38.35 E-value=19 Score=21.68 Aligned_cols=26 Identities=8% Similarity=0.077 Sum_probs=19.0
Q ss_pred CCCcccccccccccccceeeccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
..-.|..|...+.. +..-.||.+||.
T Consensus 7 ~~~~C~IC~~~~~~--Pv~~~CgH~fc~ 32 (78)
T 1t1h_A 7 EYFRCPISLELMKD--PVIVSTGQTYER 32 (78)
T ss_dssp SSSSCTTTSCCCSS--EEEETTTEEEEH
T ss_pred ccCCCCCccccccC--CEEcCCCCeecH
Confidence 35589999876543 566679999985
No 111
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=38.12 E-value=9.3 Score=18.96 Aligned_cols=11 Identities=45% Similarity=1.089 Sum_probs=7.4
Q ss_pred ceeec-cCCccc
Q psy11667 71 SFTCR-CRKLFC 81 (119)
Q Consensus 71 ~f~Cr-Cg~~FC 81 (119)
.|.|. ||..|-
T Consensus 2 p~~C~~C~k~F~ 13 (33)
T 1rim_A 2 KFACPECPKRFM 13 (33)
T ss_dssp CCCCSSSCCCCS
T ss_pred cccCCCCCchhC
Confidence 46777 777664
No 112
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=37.97 E-value=13 Score=25.44 Aligned_cols=36 Identities=19% Similarity=0.522 Sum_probs=23.3
Q ss_pred CcccccccccccccceeeccCCcccCCC---CCCCCCCCcc
Q psy11667 57 SRCAQCNAKLTVCSSFTCRCRKLFCPRH---RHPEEHACTF 94 (119)
Q Consensus 57 ~RC~~C~kkl~Ls~~f~CrCg~~FC~~H---R~pe~H~C~f 94 (119)
..|..|...+. .+....||+.||..- -+.....|++
T Consensus 54 ~~C~iC~~~~~--~~~~~~CgH~fc~~Ci~~~~~~~~~CP~ 92 (138)
T 4ayc_A 54 LQCIICSEYFI--EAVTLNCAHSFCSYCINEWMKRKIECPI 92 (138)
T ss_dssp SBCTTTCSBCS--SEEEETTSCEEEHHHHHHHTTTCSBCTT
T ss_pred CCCcccCcccC--CceECCCCCCccHHHHHHHHHcCCcCCC
Confidence 36999987654 356667999998432 1223456774
No 113
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=37.84 E-value=11 Score=19.18 Aligned_cols=13 Identities=38% Similarity=1.030 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 5 k~~~C~~C~k~f~~ 18 (39)
T 1njq_A 5 RSYTCSFCKREFRS 18 (39)
T ss_dssp SSEECTTTCCEESS
T ss_pred CceECCCCCcccCC
Confidence 367888 8887754
No 114
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=37.20 E-value=10 Score=23.79 Aligned_cols=13 Identities=23% Similarity=0.708 Sum_probs=10.3
Q ss_pred CCccccccccccc
Q psy11667 56 RSRCAQCNAKLTV 68 (119)
Q Consensus 56 k~RC~~C~kkl~L 68 (119)
+-||++|++-++-
T Consensus 3 PVRCFTCGkvi~~ 15 (55)
T 1ef4_A 3 PVRCLSCGKPVSA 15 (55)
T ss_dssp SSSCSCTTSCCHH
T ss_pred CeecCCCCCChhH
Confidence 5699999997753
No 115
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=36.89 E-value=7.7 Score=27.20 Aligned_cols=33 Identities=18% Similarity=0.631 Sum_probs=22.2
Q ss_pred CcCCCcccccccc-cc-cccc-eeec-cCCcccCCCC
Q psy11667 53 KHKRSRCAQCNAK-LT-VCSS-FTCR-CRKLFCPRHR 85 (119)
Q Consensus 53 ~~~k~RC~~C~kk-l~-Ls~~-f~Cr-Cg~~FC~~HR 85 (119)
+..+..|.+|++. +. .+.| .+|+ |+.+|=+-=-
T Consensus 33 q~aky~CpfCgk~~vKR~a~GIW~C~kCg~~~AGGAy 69 (103)
T 4a17_Y 33 QHAKYGCPFCGKVAVKRAAVGIWKCKPCKKIIAGGAW 69 (103)
T ss_dssp HHSCEECTTTCCEEEEEEETTEEEETTTTEEEECCSS
T ss_pred hhcCCCCCCCCCceeeecCcceEEcCCCCCEEeCCcc
Confidence 4567899999862 22 1234 4999 9999876443
No 116
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=36.73 E-value=11 Score=24.61 Aligned_cols=13 Identities=23% Similarity=0.508 Sum_probs=10.5
Q ss_pred CCccccccccccc
Q psy11667 56 RSRCAQCNAKLTV 68 (119)
Q Consensus 56 k~RC~~C~kkl~L 68 (119)
+-||++|++-++-
T Consensus 4 PVRCFTCGkvi~~ 16 (70)
T 1twf_J 4 PVRCFSCGKVVGD 16 (70)
T ss_dssp CSBCTTTCCBCTT
T ss_pred CeecCCCCCChHH
Confidence 5699999998764
No 117
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=36.19 E-value=13 Score=21.85 Aligned_cols=28 Identities=18% Similarity=0.515 Sum_probs=18.2
Q ss_pred CCCcccccccccccc-----cceeeccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVC-----SSFTCRCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls-----~~f~CrCg~~FC~ 82 (119)
....|..|...+... ....-.||..||.
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~ 41 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCS 41 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEH
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhH
Confidence 455799998865431 0144569999975
No 118
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=36.01 E-value=15 Score=25.15 Aligned_cols=24 Identities=29% Similarity=0.617 Sum_probs=17.2
Q ss_pred Cccccccccccccc-------ceeec-cCCcc
Q psy11667 57 SRCAQCNAKLTVCS-------SFTCR-CRKLF 80 (119)
Q Consensus 57 ~RC~~C~kkl~Ls~-------~f~Cr-Cg~~F 80 (119)
.-|..|+--|.+.. .|.|+ |++.+
T Consensus 5 ~FCp~Cgn~L~~~~~~~~~~~~~~C~~C~y~~ 36 (113)
T 3h0g_I 5 QYCIECNNMLYPREDKVDRVLRLACRNCDYSE 36 (113)
T ss_dssp CCCSSSCCCCEECCCTTTCCCCEECSSSCCEE
T ss_pred eeCcCCCCEeeEcccCCCCeeEEECCCCCCeE
Confidence 35788887665432 59999 99876
No 119
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=35.97 E-value=14 Score=23.80 Aligned_cols=30 Identities=33% Similarity=0.707 Sum_probs=20.5
Q ss_pred cccccccccc---ccceeec-cCCcccCCCCCCC
Q psy11667 59 CAQCNAKLTV---CSSFTCR-CRKLFCPRHRHPE 88 (119)
Q Consensus 59 C~~C~kkl~L---s~~f~Cr-Cg~~FC~~HR~pe 88 (119)
|..|..-+.. .....|. |+..||..++.+-
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 61 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CcCCCchheecCCCCceEeCCCCCccccccCCch
Confidence 6666553321 1357897 9999999999753
No 120
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.83 E-value=17 Score=21.79 Aligned_cols=26 Identities=27% Similarity=0.548 Sum_probs=19.0
Q ss_pred CCCcccccccccccccceee-ccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTC-RCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~C-rCg~~FC~ 82 (119)
....|..|...+.. ...- .||..||.
T Consensus 14 ~~~~C~IC~~~~~~--p~~~~~CgH~fC~ 40 (72)
T 2djb_A 14 PYILCSICKGYLID--ATTITECLHTFCK 40 (72)
T ss_dssp GGGSCTTTSSCCSS--CEECSSSCCEECH
T ss_pred CCCCCCCCChHHHC--cCEECCCCCHHHH
Confidence 35689999876643 5555 69999986
No 121
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=35.57 E-value=12 Score=19.05 Aligned_cols=13 Identities=31% Similarity=0.874 Sum_probs=9.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 10 ~~~~C~~C~k~f~~ 23 (42)
T 2epc_A 10 TPYLCGQCGKSFTQ 23 (42)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCeECCCCCcccCC
Confidence 368888 8887754
No 122
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=35.41 E-value=14 Score=23.54 Aligned_cols=11 Identities=27% Similarity=0.573 Sum_probs=6.5
Q ss_pred CCccccccccc
Q psy11667 56 RSRCAQCNAKL 66 (119)
Q Consensus 56 k~RC~~C~kkl 66 (119)
...|..|++..
T Consensus 34 ~~~C~~C~k~F 44 (96)
T 2ctd_A 34 SVSCPTCQAVG 44 (96)
T ss_dssp CEECTTTCSCE
T ss_pred CcCCCCCCCCc
Confidence 34666666654
No 123
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.41 E-value=23 Score=20.51 Aligned_cols=29 Identities=17% Similarity=0.508 Sum_probs=18.7
Q ss_pred cCCCccccccccccccc-----ceeeccCCcccC
Q psy11667 54 HKRSRCAQCNAKLTVCS-----SFTCRCRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~-----~f~CrCg~~FC~ 82 (119)
.....|..|...+.... ...-.||..||.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~ 46 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCS 46 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEH
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcH
Confidence 44568999988654310 144559999884
No 124
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.33 E-value=12 Score=19.54 Aligned_cols=13 Identities=31% Similarity=0.787 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (44)
T 2epv_A 11 KPYECNECGKAFIW 24 (44)
T ss_dssp CSEECSSSCCEESS
T ss_pred cCeECCCCCcccCc
Confidence 368888 8887753
No 125
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.03 E-value=12 Score=23.57 Aligned_cols=27 Identities=19% Similarity=0.524 Sum_probs=19.4
Q ss_pred cCCCcccccccccc-c-ccceeec-cCCcc
Q psy11667 54 HKRSRCAQCNAKLT-V-CSSFTCR-CRKLF 80 (119)
Q Consensus 54 ~~k~RC~~C~kkl~-L-s~~f~Cr-Cg~~F 80 (119)
.....|..|++.|- | ..+++|+ |+..+
T Consensus 26 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 55 (74)
T 2db6_A 26 KKPKFCDVCARMIVLNNKFGLRCKNCKTNI 55 (74)
T ss_dssp SSCEECSSSCCEECHHHHEEEEESSSCCEE
T ss_pred CCCcCchhcChhhccccCCccccCCCCCcc
Confidence 34567999998653 3 2699999 97764
No 126
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=35.01 E-value=22 Score=23.33 Aligned_cols=22 Identities=23% Similarity=0.551 Sum_probs=15.2
Q ss_pred CCcCCCcccccccc-cccccceeec
Q psy11667 52 TKHKRSRCAQCNAK-LTVCSSFTCR 75 (119)
Q Consensus 52 ~~~~k~RC~~C~kk-l~Ls~~f~Cr 75 (119)
+..++.+|..|+++ .|- .++|.
T Consensus 13 ~~R~~l~C~iC~~~~~GA--ciqC~ 35 (87)
T 2lq6_A 13 PARWKLTCYLCKQKGVGA--SIQCH 35 (87)
T ss_dssp CCCCCCCBTTTTBCCSSC--EEECS
T ss_pred hHHhcCCCcCCCCCCCcE--eEecC
Confidence 34567899999875 566 45554
No 127
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.62 E-value=14 Score=21.78 Aligned_cols=27 Identities=22% Similarity=0.655 Sum_probs=19.3
Q ss_pred CCCcccccccccccccceeeccCCcccCC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCRCRKLFCPR 83 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~ 83 (119)
....|..|...+.. ...-.||..||..
T Consensus 14 ~~~~C~IC~~~~~~--p~~~~CgH~fC~~ 40 (66)
T 2ecy_A 14 DKYKCEKCHLVLCS--PKQTECGHRFCES 40 (66)
T ss_dssp CCEECTTTCCEESS--CCCCSSSCCCCHH
T ss_pred cCCCCCCCChHhcC--eeECCCCCHHHHH
Confidence 35689999876543 4555799999863
No 128
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=34.37 E-value=14 Score=25.27 Aligned_cols=35 Identities=29% Similarity=0.679 Sum_probs=23.1
Q ss_pred CCCcccccccccccccceeec-cCCcc---cCCC-CCCCCC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCR-CRKLF---CPRH-RHPEEH 90 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~Cr-Cg~~F---C~~H-R~pe~H 90 (119)
.-..|.+|.-...- .-|.|| |+++| |..- +|...+
T Consensus 14 ~D~~C~VC~~~t~~-~l~pCRvC~RvfH~~CL~r~gy~~~~ 53 (89)
T 1wil_A 14 NDEMCDVCEVWTAE-SLFPCRVCTRVFHDGCLRRMGYIQGD 53 (89)
T ss_dssp CSCCCTTTCCCCSS-CCSSCSSSSSCCCHHHHHHHTSCCCC
T ss_pred CCcccCcccccccc-ceeccccccccccHhhcccccccccH
Confidence 44589999865433 578999 99997 4433 444443
No 129
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=34.25 E-value=15 Score=32.74 Aligned_cols=27 Identities=30% Similarity=0.828 Sum_probs=21.6
Q ss_pred CCcccccccccccccceeec-cCCcccCC
Q psy11667 56 RSRCAQCNAKLTVCSSFTCR-CRKLFCPR 83 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~ 83 (119)
...|..|+-.-.- --.+|. |++.||..
T Consensus 11 ~~~c~yc~~~~~~-~~~~c~~~~~wfcn~ 38 (802)
T 2xzl_A 11 DNSCAYCGIDSAK-CVIKCNSCKKWFCNT 38 (802)
T ss_dssp -CCCTTTCCCCTT-TEEEETTTCCEEECC
T ss_pred hhhCcccCCCCCc-eEEEeCCCCcEecCC
Confidence 3589999987655 578998 99999975
No 130
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.16 E-value=12 Score=19.03 Aligned_cols=13 Identities=23% Similarity=0.986 Sum_probs=9.0
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 9 k~~~C~~C~k~f~~ 22 (42)
T 2yte_A 9 KPYSCAECKETFSD 22 (42)
T ss_dssp CSCBCTTTCCBCSS
T ss_pred CCeECCCCCCccCC
Confidence 367888 8877753
No 131
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.12 E-value=12 Score=19.02 Aligned_cols=13 Identities=31% Similarity=0.922 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 10 k~~~C~~C~k~f~~ 23 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQ 23 (42)
T ss_dssp CSBCCTTTTCCBSS
T ss_pred CCeeCCCccchhCC
Confidence 467888 8887754
No 132
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=34.10 E-value=13 Score=20.26 Aligned_cols=14 Identities=29% Similarity=0.833 Sum_probs=10.4
Q ss_pred cceeec-cCCcccCC
Q psy11667 70 SSFTCR-CRKLFCPR 83 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~~ 83 (119)
..|.|. ||..|-..
T Consensus 6 kp~~C~~C~k~F~~~ 20 (48)
T 3iuf_A 6 KPYACDICGKRYKNR 20 (48)
T ss_dssp SCEECTTTCCEESSH
T ss_pred cCEECCCcCcccCCH
Confidence 368898 98888643
No 133
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=34.06 E-value=17 Score=23.26 Aligned_cols=26 Identities=19% Similarity=0.599 Sum_probs=18.0
Q ss_pred CCcccccccccccccceeeccCCcccCC
Q psy11667 56 RSRCAQCNAKLTVCSSFTCRCRKLFCPR 83 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~CrCg~~FC~~ 83 (119)
...|..|...+.- ...-.||..||..
T Consensus 21 ~~~C~IC~~~~~~--p~~~~CgH~fC~~ 46 (112)
T 1jm7_A 21 ILECPICLELIKE--PVSTKCDHIFCKF 46 (112)
T ss_dssp HTSCSSSCCCCSS--CCBCTTSCCCCSH
T ss_pred CCCCcccChhhcC--eEECCCCCHHHHH
Confidence 3479999875533 4455799999863
No 134
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=33.99 E-value=9.7 Score=22.46 Aligned_cols=9 Identities=22% Similarity=0.981 Sum_probs=4.1
Q ss_pred ccccccccc
Q psy11667 58 RCAQCNAKL 66 (119)
Q Consensus 58 RC~~C~kkl 66 (119)
+|..|++.+
T Consensus 13 ~C~~C~~~i 21 (72)
T 3f6q_B 13 TCERCKGGF 21 (72)
T ss_dssp BCTTTCCBC
T ss_pred cchhcCccc
Confidence 444444433
No 135
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.90 E-value=20 Score=21.75 Aligned_cols=27 Identities=22% Similarity=0.715 Sum_probs=15.6
Q ss_pred cccccccccccccceeeccCCcccCCCC
Q psy11667 58 RCAQCNAKLTVCSSFTCRCRKLFCPRHR 85 (119)
Q Consensus 58 RC~~C~kkl~Ls~~f~CrCg~~FC~~HR 85 (119)
+|..|++.|.. ..|.=+=|..||..|-
T Consensus 37 ~C~~C~~~L~~-~~f~~~~g~~yC~~cy 63 (76)
T 1x68_A 37 NCGKCSVSLVG-KGFLTQNKEIFCQKCG 63 (76)
T ss_dssp BCTTTCCBCSS-SCEEEETTEEEETTTT
T ss_pred ChhhCCCcCCC-CceEeECCEEECHHHh
Confidence 44446666654 4455556667776653
No 136
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=33.79 E-value=15 Score=25.69 Aligned_cols=27 Identities=22% Similarity=0.575 Sum_probs=20.9
Q ss_pred CCCcccccccccccccceeeccCCcccCC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCRCRKLFCPR 83 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~ 83 (119)
..-.|..|...+.. +..+.||.+||..
T Consensus 17 ~~~~C~IC~~~~~~--pv~~~CgH~fC~~ 43 (170)
T 3hcs_A 17 SKYECPICLMALRE--AVQTPCGHRFCKA 43 (170)
T ss_dssp GGGBCTTTCSBCSS--EEECTTSCEEEHH
T ss_pred CCCCCCCCChhhcC--cEECCCCCHHHHH
Confidence 34589999986644 7788999999963
No 137
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.62 E-value=14 Score=18.92 Aligned_cols=13 Identities=23% Similarity=0.828 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 10 k~~~C~~C~k~f~~ 23 (42)
T 2en2_A 10 KPYKCETCGARFVQ 23 (42)
T ss_dssp CSEECTTTCCEESS
T ss_pred CCEeCCCcChhhCC
Confidence 368888 8877754
No 138
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.59 E-value=33 Score=22.05 Aligned_cols=44 Identities=16% Similarity=0.359 Sum_probs=28.7
Q ss_pred cCCCccccccccc-cc-ccceeec-cCCcccCCCCCCCCCCCccccH
Q psy11667 54 HKRSRCAQCNAKL-TV-CSSFTCR-CRKLFCPRHRHPEEHACTFDYK 97 (119)
Q Consensus 54 ~~k~RC~~C~kkl-~L-s~~f~Cr-Cg~~FC~~HR~pe~H~C~fDyk 97 (119)
.....|..|++.| || ..+++|. |+..+=.+....--..|..++.
T Consensus 26 ~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~ 72 (85)
T 2eli_A 26 GSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHT 72 (85)
T ss_dssp SSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCC
T ss_pred CCCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchh
Confidence 3456899999865 43 2699999 9887533333333457777664
No 139
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=33.32 E-value=12 Score=20.48 Aligned_cols=13 Identities=31% Similarity=0.802 Sum_probs=10.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|+|. ||..|-.
T Consensus 7 kp~~C~~CgK~F~~ 20 (36)
T 1fv5_A 7 ARFMCLPCGIAFSS 20 (36)
T ss_dssp CCCEETTTTEECSC
T ss_pred cCeECCCCCCccCC
Confidence 478898 9988864
No 140
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=32.94 E-value=16 Score=24.23 Aligned_cols=24 Identities=21% Similarity=0.524 Sum_probs=17.9
Q ss_pred CcccccccccccccceeeccCCcccC
Q psy11667 57 SRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 57 ~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
-.|..|...+.. +..-.||+.||.
T Consensus 53 ~~C~IC~~~~~~--p~~~~CgH~fC~ 76 (124)
T 3fl2_A 53 FQCICCQELVFR--PITTVCQHNVCK 76 (124)
T ss_dssp TBCTTTSSBCSS--EEECTTSCEEEH
T ss_pred CCCCcCChHHcC--cEEeeCCCcccH
Confidence 579999876543 455579999986
No 141
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.86 E-value=14 Score=19.40 Aligned_cols=13 Identities=31% Similarity=0.897 Sum_probs=9.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2ytp_A 11 RHYECSECGKAFAR 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCeECCcCCcccCC
Confidence 368888 8887753
No 142
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=32.82 E-value=12 Score=24.34 Aligned_cols=13 Identities=23% Similarity=0.580 Sum_probs=10.2
Q ss_pred CCccccccccccc
Q psy11667 56 RSRCAQCNAKLTV 68 (119)
Q Consensus 56 k~RC~~C~kkl~L 68 (119)
+-||++|++-++-
T Consensus 4 PVRCFTCGkvi~~ 16 (66)
T 4ayb_N 4 PIRCFTCGSLIAD 16 (66)
T ss_dssp CSBCTTTCCBCHH
T ss_pred CcccCCCcHhHHH
Confidence 4599999997753
No 143
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=32.76 E-value=18 Score=25.71 Aligned_cols=26 Identities=31% Similarity=0.581 Sum_probs=19.0
Q ss_pred CCCccccccccccccc-------ceeec-cCCcc
Q psy11667 55 KRSRCAQCNAKLTVCS-------SFTCR-CRKLF 80 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~-------~f~Cr-Cg~~F 80 (119)
.-.-|..|+--|.... -|.|+ |++.+
T Consensus 23 ~~~FCPeCgNmL~pked~~~~~l~~~CrtCgY~~ 56 (133)
T 3qt1_I 23 TFRFCRDCNNMLYPREDKENNRLLFECRTCSYVE 56 (133)
T ss_dssp CCCBCTTTCCBCBCCBCTTTCCBCCBCSSSCCBC
T ss_pred CCeeCCCCCCEeeECccCCCceeEEECCCCCCcE
Confidence 3467999998775532 49999 98875
No 144
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.60 E-value=15 Score=19.29 Aligned_cols=13 Identities=31% Similarity=0.874 Sum_probs=9.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~F~~ 24 (46)
T 2emi_A 11 RHYECSECGKAFIQ 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCCCCCCCCcccCC
Confidence 368888 8888754
No 145
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.58 E-value=15 Score=18.76 Aligned_cols=13 Identities=31% Similarity=0.846 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 9 k~~~C~~C~k~f~~ 22 (41)
T 2ept_A 9 RVYECQECGKSFRQ 22 (41)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCeECCCCCCCcCC
Confidence 367888 8887743
No 146
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.52 E-value=14 Score=18.96 Aligned_cols=13 Identities=23% Similarity=0.761 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 10 k~~~C~~C~k~f~~ 23 (42)
T 2eos_A 10 KPYPCEICGTRFRH 23 (42)
T ss_dssp CCBCCSSSCCCBSS
T ss_pred CCEECCCCCCccCC
Confidence 367888 8877754
No 147
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=32.50 E-value=19 Score=23.49 Aligned_cols=39 Identities=23% Similarity=0.530 Sum_probs=24.2
Q ss_pred CCCcccccccccccccceeeccCCcccCC--CCCCC--CCCCccc
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCRCRKLFCPR--HRHPE--EHACTFD 95 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~CrCg~~FC~~--HR~pe--~H~C~fD 95 (119)
..-.|..|...+.- ...-.||.+||.. .++.+ ...|++-
T Consensus 14 ~~~~C~iC~~~~~~--p~~~~CgH~fC~~Ci~~~~~~~~~~CP~C 56 (115)
T 3l11_A 14 SECQCGICMEILVE--PVTLPCNHTLCKPCFQSTVEKASLCCPFC 56 (115)
T ss_dssp HHHBCTTTCSBCSS--CEECTTSCEECHHHHCCCCCTTTSBCTTT
T ss_pred CCCCCccCCcccCc--eeEcCCCCHHhHHHHHHHHhHCcCCCCCC
Confidence 34589999876543 4445799999853 23322 3467644
No 148
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=32.44 E-value=25 Score=21.47 Aligned_cols=26 Identities=19% Similarity=0.567 Sum_probs=19.1
Q ss_pred cCCCccccccccc-cc-ccceeec-cCCc
Q psy11667 54 HKRSRCAQCNAKL-TV-CSSFTCR-CRKL 79 (119)
Q Consensus 54 ~~k~RC~~C~kkl-~L-s~~f~Cr-Cg~~ 79 (119)
..+..|..|++.| || ..+++|+ |+..
T Consensus 22 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 50 (66)
T 1y8f_A 22 TTPTYCYECEGLLWGIARQGMRCTECGVK 50 (66)
T ss_dssp SSCCCCTTTCCCCCSSCCEEEEETTTCCE
T ss_pred CCCcChhhcChhhcccCcceeEcCCCCCe
Confidence 3456899999965 43 2689999 8765
No 149
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.23 E-value=15 Score=19.10 Aligned_cols=13 Identities=31% Similarity=1.068 Sum_probs=9.8
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (44)
T 2yu5_A 11 NPFKCSKCDRVFTQ 24 (44)
T ss_dssp CSEECSSSSCEESS
T ss_pred CCeECCCCCchhCC
Confidence 468888 8888754
No 150
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=32.12 E-value=21 Score=23.57 Aligned_cols=37 Identities=24% Similarity=0.602 Sum_probs=23.7
Q ss_pred CCCcccccccccccccceee-ccCCcccCCC--CCCCCCCCcc
Q psy11667 55 KRSRCAQCNAKLTVCSSFTC-RCRKLFCPRH--RHPEEHACTF 94 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~C-rCg~~FC~~H--R~pe~H~C~f 94 (119)
..-.|..|...+.- ...- .||..||..- ++.. ..|+.
T Consensus 21 ~~~~C~IC~~~~~~--pv~~~~CgH~fC~~Ci~~~~~-~~CP~ 60 (117)
T 1jm7_B 21 KLLRCSRCTNILRE--PVCLGGCEHIFCSNCVSDCIG-TGCPV 60 (117)
T ss_dssp HTTSCSSSCSCCSS--CBCCCSSSCCBCTTTGGGGTT-TBCSS
T ss_pred hCCCCCCCChHhhC--ccEeCCCCCHHHHHHHHHHhc-CCCcC
Confidence 45689999876543 5555 7999998543 2222 56764
No 151
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=32.10 E-value=15 Score=32.64 Aligned_cols=27 Identities=22% Similarity=0.576 Sum_probs=22.0
Q ss_pred CCcccccccccccccceeec-cCCcccCC
Q psy11667 56 RSRCAQCNAKLTVCSSFTCR-CRKLFCPR 83 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~ 83 (119)
...|..|+-.-.- .-.+|. |++.||..
T Consensus 6 ~~~c~~c~~~~~~-~~~~~~~~~~~fcn~ 33 (800)
T 2wjy_A 6 IHACSYCGIHDPA-CVVYCNTSKKWFCNG 33 (800)
T ss_dssp TTSCTTTCCCCGG-GEEEETTTTEEEESC
T ss_pred chhccccCCCCCC-eEEEcCCCCCccccC
Confidence 3589999987665 578998 99999975
No 152
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.09 E-value=15 Score=19.31 Aligned_cols=13 Identities=38% Similarity=0.945 Sum_probs=10.0
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eoy_A 11 KCFKCNKCEKTFSC 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCEECcCCCCcCCC
Confidence 468898 8888765
No 153
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.97 E-value=15 Score=19.22 Aligned_cols=14 Identities=29% Similarity=0.707 Sum_probs=10.4
Q ss_pred cceeec-cCCcccCC
Q psy11667 70 SSFTCR-CRKLFCPR 83 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~~ 83 (119)
..|.|. |+..|-..
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2en3_A 11 KPFQCKECGMNFSWS 25 (46)
T ss_dssp CSEECSSSCCEESSS
T ss_pred CCeeCcccChhhCCH
Confidence 468898 88888643
No 154
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=31.89 E-value=15 Score=18.72 Aligned_cols=13 Identities=31% Similarity=0.882 Sum_probs=9.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 9 k~~~C~~C~k~f~~ 22 (42)
T 2el5_A 9 NPYECSECGKAFNR 22 (42)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCccCCCcChhhCC
Confidence 468888 8887754
No 155
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.73 E-value=15 Score=19.00 Aligned_cols=13 Identities=23% Similarity=0.779 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (44)
T 2emb_A 11 KRYECSKCQATFNL 24 (44)
T ss_dssp SSEECTTTCCEESC
T ss_pred CCeECCCCCCccCC
Confidence 368888 8888754
No 156
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.63 E-value=15 Score=19.11 Aligned_cols=13 Identities=31% Similarity=0.899 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eow_A 11 KPYKCNECGKAFRA 24 (46)
T ss_dssp CCEECTTSCCEESS
T ss_pred CCeeccccCChhcC
Confidence 468888 8887754
No 157
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.56 E-value=15 Score=19.29 Aligned_cols=13 Identities=31% Similarity=1.007 Sum_probs=9.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2enf_A 11 KPYKCNECGKVFTQ 24 (46)
T ss_dssp CSCBCSSSCCBCSS
T ss_pred cCeECCCCCcccCC
Confidence 367888 8887754
No 158
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.52 E-value=16 Score=19.09 Aligned_cols=13 Identities=38% Similarity=0.999 Sum_probs=9.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ytf_A 11 KPFECSECQKAFNT 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCcCCCCCCcccCC
Confidence 468888 8888754
No 159
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.27 E-value=16 Score=18.80 Aligned_cols=13 Identities=31% Similarity=0.963 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (44)
T 2eof_A 11 KPYECNECQKAFNT 24 (44)
T ss_dssp CSEECTTTCCEESC
T ss_pred CCeECCCCCcccCC
Confidence 468888 8887754
No 160
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.13 E-value=16 Score=19.20 Aligned_cols=13 Identities=31% Similarity=0.797 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2em4_A 11 RPYECIECGKAFKT 24 (46)
T ss_dssp SSEECSSSCCEESS
T ss_pred cCcCCCCCCCccCC
Confidence 368888 8887753
No 161
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.02 E-value=16 Score=19.11 Aligned_cols=13 Identities=31% Similarity=1.007 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 ~~~~C~~C~k~F~~ 24 (46)
T 2em3_A 11 KPYECKVCSKAFTQ 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred cCeECCCCCcccCC
Confidence 468888 8887754
No 162
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=30.99 E-value=19 Score=23.87 Aligned_cols=26 Identities=23% Similarity=0.604 Sum_probs=19.4
Q ss_pred CCCcccccccccccccceeeccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
....|..|...+.. .....||..||.
T Consensus 17 ~~~~C~IC~~~~~~--p~~~~CgH~fC~ 42 (118)
T 3hct_A 17 SKYECPICLMALRE--AVQTPCGHRFCK 42 (118)
T ss_dssp GGGBCTTTCSBCSS--EEECTTSCEEEH
T ss_pred CCCCCCcCChhhcC--eEECCcCChhhH
Confidence 34589999976643 566689999985
No 163
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=30.93 E-value=12 Score=24.77 Aligned_cols=26 Identities=19% Similarity=0.557 Sum_probs=18.7
Q ss_pred CCCcccccccc-ccccc---ceeec-cCCcc
Q psy11667 55 KRSRCAQCNAK-LTVCS---SFTCR-CRKLF 80 (119)
Q Consensus 55 ~k~RC~~C~kk-l~Ls~---~f~Cr-Cg~~F 80 (119)
.+.-|..|++. +||.. +|+|+ |+..+
T Consensus 34 ~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~ 64 (84)
T 2row_A 34 FPTNCEACMKPLWHMFKPPPALECRRCHIKC 64 (84)
T ss_dssp SCEECSSSSSEECCSSSCCCEEEESSSCCEE
T ss_pred CCcchhhcCHhhhccccCCCCCEecCCCCcc
Confidence 44579999984 44533 99999 97765
No 164
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.82 E-value=15 Score=19.25 Aligned_cols=13 Identities=38% Similarity=0.907 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (45)
T 2epu_A 11 KPFECTHCGKSFRA 24 (45)
T ss_dssp CSEEETTTTEEESS
T ss_pred cCccCCCCCCccCC
Confidence 367888 8877754
No 165
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.80 E-value=15 Score=19.08 Aligned_cols=14 Identities=36% Similarity=0.842 Sum_probs=10.2
Q ss_pred cceeec-cCCcccCC
Q psy11667 70 SSFTCR-CRKLFCPR 83 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~~ 83 (119)
..|.|. |+..|-..
T Consensus 11 ~~~~C~~C~k~F~~~ 25 (44)
T 2eox_A 11 KSYNCNECGKAFTRI 25 (44)
T ss_dssp CCEEETTTTEEESSS
T ss_pred CCeECcccCcccCCH
Confidence 468888 88887553
No 166
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=30.70 E-value=21 Score=24.25 Aligned_cols=20 Identities=30% Similarity=0.635 Sum_probs=16.5
Q ss_pred ceeeccCCcccCCCCCCCCC
Q psy11667 71 SFTCRCRKLFCPRHRHPEEH 90 (119)
Q Consensus 71 ~f~CrCg~~FC~~HR~pe~H 90 (119)
-|+|.|++..=+.+|||..|
T Consensus 48 FFkC~C~~Rt~sl~r~P~~~ 67 (92)
T 2kwq_A 48 FFKCPCGNRTISLDRLPKKH 67 (92)
T ss_dssp EEECTTSCEEEESSSSCCSC
T ss_pred EEECCCCCceeEeeeCCCCC
Confidence 68999999877779999743
No 167
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=30.52 E-value=16 Score=19.18 Aligned_cols=13 Identities=38% Similarity=0.881 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2emj_A 11 KPFECAECGKSFSI 24 (46)
T ss_dssp CSEECSSSSCEESS
T ss_pred CCEECCCCCcccCC
Confidence 468888 8887754
No 168
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.49 E-value=14 Score=19.08 Aligned_cols=13 Identities=31% Similarity=0.956 Sum_probs=9.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (44)
T 2eoj_A 11 NPYECCECGKVFSR 24 (44)
T ss_dssp CSCEETTTTEECSS
T ss_pred cCeeCCCCCCccCC
Confidence 368888 8887754
No 169
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.47 E-value=15 Score=19.31 Aligned_cols=13 Identities=31% Similarity=0.925 Sum_probs=9.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eoz_A 11 KPYSCNVCGKAFVL 24 (46)
T ss_dssp CSEEETTTTEEESS
T ss_pred CCeECcccChhhCC
Confidence 468898 8887754
No 170
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.29 E-value=17 Score=18.95 Aligned_cols=13 Identities=31% Similarity=0.874 Sum_probs=9.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2yts_A 11 KPYICNECGKSFIQ 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred cCEECCCCChhhCC
Confidence 468888 8888754
No 171
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=30.22 E-value=27 Score=21.04 Aligned_cols=24 Identities=33% Similarity=0.859 Sum_probs=16.8
Q ss_pred CCCcccccccccccccceeec-cCCc-ccC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCR-CRKL-FCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~Cr-Cg~~-FC~ 82 (119)
....|..|++. ....|. |..+ ||+
T Consensus 16 ~~~~C~~C~~~----~~~~Cs~C~~~~YCs 41 (64)
T 2odd_A 16 SSESCWNCGRK----ASETCSGCNTARYCG 41 (64)
T ss_dssp CSSSCTTTSSC----CCEEETTTSCCEESS
T ss_pred CCCcCccccCC----CcccCCCCCChhhCC
Confidence 56799999984 246787 7665 665
No 172
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=30.21 E-value=51 Score=19.19 Aligned_cols=28 Identities=21% Similarity=0.411 Sum_probs=17.5
Q ss_pred CCCccccccccccccc-ceeeccCCcccC
Q psy11667 55 KRSRCAQCNAKLTVCS-SFTCRCRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~-~f~CrCg~~FC~ 82 (119)
....|..|...+.... ...-.||..||.
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~ 41 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQ 41 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEH
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHH
Confidence 3457999987664311 223349998874
No 173
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.15 E-value=16 Score=19.14 Aligned_cols=13 Identities=38% Similarity=1.022 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2emg_A 11 NPFICSECGKVFTH 24 (46)
T ss_dssp CSCBCTTTCCBCSS
T ss_pred CCEECCccCcccCC
Confidence 367888 8877754
No 174
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=30.15 E-value=32 Score=21.67 Aligned_cols=26 Identities=27% Similarity=0.759 Sum_probs=19.7
Q ss_pred Cccccccccc-ccccceeec-cCCcccCC
Q psy11667 57 SRCAQCNAKL-TVCSSFTCR-CRKLFCPR 83 (119)
Q Consensus 57 ~RC~~C~kkl-~Ls~~f~Cr-Cg~~FC~~ 83 (119)
..|.+|+... .. ..|+|- |+..||+.
T Consensus 12 ~~C~vC~~~~~~~-akY~CPrC~~rYCSl 39 (59)
T 1x4s_A 12 GPCGFCPAGEVQP-ARYTCPRCNAPYCSL 39 (59)
T ss_dssp EEECSSCTTCCEE-ECEECTTTCCEESSH
T ss_pred CcCcCCCCCcCCC-ccccCcCCCCCccCh
Confidence 4899998622 22 479999 99999984
No 175
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.12 E-value=17 Score=18.94 Aligned_cols=13 Identities=31% Similarity=0.915 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2yrj_A 11 KPYRCGECGKAFAQ 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCeECCCCCCccCC
Confidence 468888 8888754
No 176
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.12 E-value=17 Score=18.95 Aligned_cols=13 Identities=31% Similarity=0.905 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2eor_A 11 KPYNCEECGKAFIH 24 (46)
T ss_dssp CSEECTTTCCEESS
T ss_pred cCccCCCCCCCcCC
Confidence 468888 8887743
No 177
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=30.07 E-value=14 Score=24.65 Aligned_cols=13 Identities=23% Similarity=0.674 Sum_probs=10.3
Q ss_pred ceeeccCCcccCC
Q psy11667 71 SFTCRCRKLFCPR 83 (119)
Q Consensus 71 ~f~CrCg~~FC~~ 83 (119)
.+.||||..|--.
T Consensus 23 ~ypCrCGd~F~it 35 (83)
T 1yop_A 23 TYPCPCGDRFQIY 35 (83)
T ss_dssp EEEETTTEEEEEE
T ss_pred EEeCCCCCeEEEC
Confidence 6789999988544
No 178
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.84 E-value=16 Score=19.17 Aligned_cols=13 Identities=31% Similarity=0.881 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2em6_A 11 KCYKCDVCGKEFSQ 24 (46)
T ss_dssp CCCBCSSSCCBCSS
T ss_pred CCeECCCCCcccCC
Confidence 468888 8888754
No 179
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.73 E-value=16 Score=19.17 Aligned_cols=13 Identities=38% Similarity=1.048 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2enh_A 11 KPYECDVCRKAFSH 24 (46)
T ss_dssp SSCBCTTTCCBCSS
T ss_pred CCcCCCCcCchhCC
Confidence 367788 8877754
No 180
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.64 E-value=17 Score=19.03 Aligned_cols=13 Identities=31% Similarity=0.899 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2yto_A 11 KPYKCSDCGKAFTR 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCEECcccCCccCC
Confidence 368888 8887754
No 181
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.61 E-value=15 Score=18.91 Aligned_cols=13 Identities=31% Similarity=0.899 Sum_probs=8.8
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (44)
T 2en7_A 11 KPYVCNECGKAFRS 24 (44)
T ss_dssp SSSCCTTTCCCCSS
T ss_pred cCeECCCCCCccCC
Confidence 367787 7777654
No 182
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=29.46 E-value=15 Score=24.82 Aligned_cols=11 Identities=27% Similarity=0.851 Sum_probs=9.2
Q ss_pred ceeeccCCccc
Q psy11667 71 SFTCRCRKLFC 81 (119)
Q Consensus 71 ~f~CrCg~~FC 81 (119)
.+.||||..|-
T Consensus 23 ~ypCrCGd~F~ 33 (89)
T 2jr7_A 23 FYPCPCGDNFS 33 (89)
T ss_dssp EEECTTSSEEE
T ss_pred EEcCCCCCEEE
Confidence 68899999884
No 183
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.45 E-value=18 Score=18.93 Aligned_cols=13 Identities=31% Similarity=0.950 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2emy_A 11 NPYECHECGKAFSR 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred cCcCCCCCCcccCc
Confidence 468888 8887754
No 184
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.33 E-value=18 Score=18.91 Aligned_cols=13 Identities=31% Similarity=0.887 Sum_probs=9.8
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ep3_A 11 KPYRCAECGKAFTD 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeECCCCCchhCC
Confidence 468888 8888765
No 185
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.18 E-value=17 Score=19.11 Aligned_cols=13 Identities=38% Similarity=1.007 Sum_probs=8.9
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2en9_A 11 KLFKCNECKKTFTQ 24 (46)
T ss_dssp CCCBCTTTCCBCSS
T ss_pred CCEECCccCcccCC
Confidence 367788 8777653
No 186
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.17 E-value=17 Score=19.16 Aligned_cols=13 Identities=31% Similarity=0.876 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eon_A 11 KPYKCQVCGKAFRV 24 (46)
T ss_dssp CSCBCSSSCCBCSS
T ss_pred cccCCCCCCcccCc
Confidence 367788 8877754
No 187
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=29.12 E-value=18 Score=19.93 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 23 k~~~C~~C~k~f~~ 36 (54)
T 1yui_A 23 QPATCPICYAVIRQ 36 (54)
T ss_dssp CCEECTTTCCEESS
T ss_pred CCccCCCCCcccCC
Confidence 468898 8887754
No 188
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.96 E-value=16 Score=19.20 Aligned_cols=12 Identities=42% Similarity=1.204 Sum_probs=8.1
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. |+..|-.
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eoh_A 12 PYECKECRKTFIQ 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CcCCCCcCchhCC
Confidence 57787 7776643
No 189
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.90 E-value=16 Score=19.09 Aligned_cols=13 Identities=31% Similarity=0.864 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ep1_A 11 KPYECSDCGKSFIK 24 (46)
T ss_dssp CSSCCSSSCCCCSS
T ss_pred CCcCCCCCCchhCC
Confidence 367888 8877754
No 190
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=28.76 E-value=35 Score=20.75 Aligned_cols=27 Identities=19% Similarity=0.592 Sum_probs=19.3
Q ss_pred cCCCcccccccccccc---cceeec-cCCcc
Q psy11667 54 HKRSRCAQCNAKLTVC---SSFTCR-CRKLF 80 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls---~~f~Cr-Cg~~F 80 (119)
.....|..|+-.+.++ ..+.|. ||.++
T Consensus 16 ~~~~fCPkCG~~~~ma~~~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 16 RKHRFCPRCGPGVFLAEHADRYSCGRCGYTE 46 (55)
T ss_dssp CSSCCCTTTTTTCCCEECSSEEECTTTCCCE
T ss_pred EccccCcCCCCceeEeccCCEEECCCCCCEE
Confidence 3456899999866543 467888 88875
No 191
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.75 E-value=16 Score=19.15 Aligned_cols=13 Identities=31% Similarity=0.899 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eq1_A 11 KPYKCNECGKAFRA 24 (46)
T ss_dssp CCCCCTTTTCCCSS
T ss_pred CCeECCcCChhhCC
Confidence 367888 8877754
No 192
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.52 E-value=18 Score=18.67 Aligned_cols=13 Identities=38% Similarity=1.002 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 9 k~~~C~~C~k~f~~ 22 (44)
T 2emx_A 9 KPFGCSCCEKAFSS 22 (44)
T ss_dssp CCEECSSSSCEESS
T ss_pred cCccCCCCCcccCC
Confidence 368888 8877754
No 193
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=28.38 E-value=24 Score=23.16 Aligned_cols=23 Identities=26% Similarity=0.612 Sum_probs=16.4
Q ss_pred CCcccccccccccccceeec-cCCc
Q psy11667 56 RSRCAQCNAKLTVCSSFTCR-CRKL 79 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~Cr-Cg~~ 79 (119)
...|..|++.... ..|.|. |++.
T Consensus 47 ~~~C~~C~~~~~~-~~Y~C~~C~f~ 70 (89)
T 1v5n_A 47 VYTCDKCEEEGTI-WSYHCDECDFD 70 (89)
T ss_dssp SCCCTTTSCCCCS-CEEECTTTCCC
T ss_pred CeEeCCCCCcCCC-cEEEcCCCCCe
Confidence 3589999987543 578887 7654
No 194
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.35 E-value=19 Score=18.81 Aligned_cols=13 Identities=31% Similarity=0.879 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2emh_A 11 RPYICTVCGKAFTD 24 (46)
T ss_dssp CSEECTTTCCEESS
T ss_pred CCcCCCCCCchhCC
Confidence 468888 8887754
No 195
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.28 E-value=16 Score=19.07 Aligned_cols=13 Identities=31% Similarity=0.899 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eq3_A 11 KPYECNQCGKAFSV 24 (46)
T ss_dssp CSSEETTTTEECSS
T ss_pred CCeECCCCChhhCC
Confidence 468888 8887754
No 196
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.24 E-value=19 Score=18.85 Aligned_cols=13 Identities=38% Similarity=0.996 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2em2_A 11 KPFKCKECGKAFRQ 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCEECCcCCchhCC
Confidence 368888 8887754
No 197
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.22 E-value=18 Score=18.94 Aligned_cols=13 Identities=38% Similarity=0.953 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2yth_A 11 KPFQCEECGKRFTQ 24 (46)
T ss_dssp SSBCCSSSCCCBSS
T ss_pred cCCCCCCCCcccCC
Confidence 367888 8877754
No 198
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.22 E-value=19 Score=18.86 Aligned_cols=13 Identities=31% Similarity=0.790 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2eoo_A 11 RPYGCNECGKNFGR 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCEEccccCcccCC
Confidence 468888 8887754
No 199
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.19 E-value=18 Score=18.81 Aligned_cols=13 Identities=31% Similarity=0.841 Sum_probs=9.0
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (47)
T 2epx_A 11 KPYECIECGKAFIQ 24 (47)
T ss_dssp CSBCCSSSCCCBSS
T ss_pred CCEECCccCchhCC
Confidence 367888 8877753
No 200
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=28.07 E-value=14 Score=27.43 Aligned_cols=31 Identities=23% Similarity=0.504 Sum_probs=21.0
Q ss_pred Ccccccccccc-cc-cceeec-cCCcccCCCCCC
Q psy11667 57 SRCAQCNAKLT-VC-SSFTCR-CRKLFCPRHRHP 87 (119)
Q Consensus 57 ~RC~~C~kkl~-Ls-~~f~Cr-Cg~~FC~~HR~p 87 (119)
.-|..|+|||- .. ..+.|- |+..-=..|||-
T Consensus 43 ~ACp~CnKKV~~~~~g~~~CekC~~~~~~~~RYi 76 (172)
T 3u50_C 43 YRCTCQGKSVLKYHGDSFFCESCQQFINPQVHLM 76 (172)
T ss_dssp EECTTSCCCEEEETTTEEEETTTTEECCCEEEEC
T ss_pred hhchhhCCEeeeCCCCeEECCCCCCCCCceEEEE
Confidence 46778999996 22 458898 877633346664
No 201
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.07 E-value=19 Score=18.78 Aligned_cols=13 Identities=31% Similarity=0.953 Sum_probs=9.8
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2eq0_A 11 KPYKCHECGKVFRR 24 (46)
T ss_dssp CCEECTTTCCEESS
T ss_pred CCeECCCCCchhCC
Confidence 468888 8888754
No 202
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.04 E-value=18 Score=18.82 Aligned_cols=13 Identities=38% Similarity=0.805 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2eop_A 11 KPHECRECGKSFSF 24 (46)
T ss_dssp CSCBCTTTCCBCSS
T ss_pred CCeeCCCCCchhCC
Confidence 367888 8887754
No 203
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.01 E-value=16 Score=19.17 Aligned_cols=13 Identities=31% Similarity=1.007 Sum_probs=9.0
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2yti_A 11 KPYKCNECGKVFTQ 24 (46)
T ss_dssp CTTCCSSSCCCCSS
T ss_pred cCeECCCCCcccCC
Confidence 367788 8877754
No 204
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.88 E-value=20 Score=18.82 Aligned_cols=13 Identities=38% Similarity=0.928 Sum_probs=9.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2emf_A 11 KHFECTECGKAFTR 24 (46)
T ss_dssp CCEECSSSCCEESC
T ss_pred CCeECCCCCchhCC
Confidence 368888 8888754
No 205
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.88 E-value=20 Score=18.74 Aligned_cols=13 Identities=31% Similarity=0.761 Sum_probs=9.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2em7_A 11 KPYKCEECGKGFIC 24 (46)
T ss_dssp CSEECSSSCCEESC
T ss_pred cCccCCCccchhCC
Confidence 468888 8887754
No 206
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.79 E-value=20 Score=18.73 Aligned_cols=13 Identities=31% Similarity=0.828 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ytj_A 11 KPYICAECGKAFTI 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred cCeECCCCChhhCC
Confidence 468888 8887754
No 207
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=27.66 E-value=20 Score=18.72 Aligned_cols=13 Identities=31% Similarity=0.989 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ema_A 11 KRYKCNECGKVFSR 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred cCcCCCCCcchhCC
Confidence 468888 8888754
No 208
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.63 E-value=20 Score=18.63 Aligned_cols=14 Identities=36% Similarity=0.947 Sum_probs=10.3
Q ss_pred cceeec-cCCcccCC
Q psy11667 70 SSFTCR-CRKLFCPR 83 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~~ 83 (119)
..|.|. ||..|-..
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2epw_A 11 KPCKCTECGKAFCWK 25 (46)
T ss_dssp CSEECSSSCCEESSS
T ss_pred CCeeCCCCCCccCCH
Confidence 468888 88887653
No 209
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=27.62 E-value=20 Score=18.63 Aligned_cols=13 Identities=31% Similarity=0.812 Sum_probs=9.8
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2em9_A 11 KPYNCKECGKSFRW 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred cCeECCccccccCC
Confidence 468888 8888754
No 210
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=27.54 E-value=19 Score=21.43 Aligned_cols=12 Identities=33% Similarity=0.877 Sum_probs=8.4
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
+|.|. ||..|-.
T Consensus 4 py~C~~C~k~F~~ 16 (60)
T 4gzn_C 4 PFFCNFCGKTYRD 16 (60)
T ss_dssp CEECTTTCCEESS
T ss_pred CccCCCCCCEeCC
Confidence 57777 7777754
No 211
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.28 E-value=17 Score=19.01 Aligned_cols=13 Identities=31% Similarity=0.943 Sum_probs=9.0
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eq2_A 11 KPYQCNECGKAFSQ 24 (46)
T ss_dssp CSSSCCSSCCCCSS
T ss_pred CCeECCCCCcccCC
Confidence 367788 8877754
No 212
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.27 E-value=20 Score=18.66 Aligned_cols=13 Identities=31% Similarity=0.887 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2emp_A 11 KPYMCNECGKAFSV 24 (46)
T ss_dssp CSEECSSSCCEESC
T ss_pred cCeECCCCCchhCC
Confidence 468888 8887754
No 213
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.23 E-value=21 Score=18.66 Aligned_cols=13 Identities=31% Similarity=0.940 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ene_A 11 KPYKCNECGKVFRH 24 (46)
T ss_dssp SSEECSSSCCEESS
T ss_pred CCeECCCCCchhCC
Confidence 368888 8888754
No 214
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.21 E-value=21 Score=18.73 Aligned_cols=13 Identities=31% Similarity=0.700 Sum_probs=9.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2em5_A 11 KSHQCHECGRGFTL 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeECCcCCCccCC
Confidence 468888 8888754
No 215
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.17 E-value=21 Score=18.65 Aligned_cols=13 Identities=38% Similarity=0.907 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2enc_A 11 KPFKCEECGKGFYT 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCcCCCCCCCcCCC
Confidence 368888 8887754
No 216
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.13 E-value=20 Score=18.67 Aligned_cols=13 Identities=38% Similarity=0.996 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2yso_A 11 KSHQCRECGEIFFQ 24 (46)
T ss_dssp CCEECTTTCCEESS
T ss_pred CCEEccccChhhCC
Confidence 368888 8888754
No 217
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.09 E-value=18 Score=18.80 Aligned_cols=13 Identities=31% Similarity=0.853 Sum_probs=8.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (44)
T 2eou_A 11 TTSECQECGKIFRH 24 (44)
T ss_dssp CCCCCTTTCCCCSS
T ss_pred cCeECCCCCcccCC
Confidence 357787 7777643
No 218
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.07 E-value=18 Score=18.97 Aligned_cols=13 Identities=38% Similarity=0.833 Sum_probs=8.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2emz_A 11 RPFKCNECGKGFGR 24 (46)
T ss_dssp CSCCCSSSCCCCSS
T ss_pred CCeECCCCCcccCC
Confidence 357787 7776644
No 219
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.05 E-value=21 Score=18.64 Aligned_cols=13 Identities=31% Similarity=1.007 Sum_probs=9.8
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2yu8_A 11 KPYKCNECGKVFTQ 24 (46)
T ss_dssp SSEECSSSCCEESS
T ss_pred CCeECCcCCchhCC
Confidence 468888 8888765
No 220
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=26.95 E-value=37 Score=22.57 Aligned_cols=27 Identities=19% Similarity=0.573 Sum_probs=18.9
Q ss_pred CCCcccccccccccccceeec---cCCcccCC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCR---CRKLFCPR 83 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~Cr---Cg~~FC~~ 83 (119)
...+|..|.+.- . +-+.|- ||.++|++
T Consensus 24 ~~~~C~~C~~~~-~-~lw~CL~~~Cg~vgCgr 53 (97)
T 2uzg_A 24 SLGTCQDCKVQG-P-NLWACLENRCSYVGCGE 53 (97)
T ss_dssp TTTCCSSSCCCC-S-SCEEECCTTCCCEECCT
T ss_pred CCCcCcCcCCCC-C-CceeeecccCCCcccCC
Confidence 356899998421 1 235677 99999986
No 221
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.91 E-value=21 Score=18.55 Aligned_cols=13 Identities=31% Similarity=0.820 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eme_A 11 KPYVCDYCGKAFGL 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeECCCCChhhCC
Confidence 368888 8888754
No 222
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.90 E-value=21 Score=18.62 Aligned_cols=13 Identities=31% Similarity=1.007 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2ytk_A 11 KPYKCNECGKVFTQ 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCEeCCcCCCccCC
Confidence 468888 8887754
No 223
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.84 E-value=20 Score=18.80 Aligned_cols=13 Identities=23% Similarity=0.751 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2elz_A 11 KPYKCEDCGKGYNR 24 (46)
T ss_dssp SSCBCSSSCCBCSS
T ss_pred CCeeCcccCchhCC
Confidence 367888 8877754
No 224
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.75 E-value=21 Score=18.60 Aligned_cols=13 Identities=31% Similarity=0.905 Sum_probs=9.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eml_A 11 KPYECSVCGKAFSH 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeeCCCcCCccCC
Confidence 468888 8887754
No 225
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=26.71 E-value=21 Score=18.57 Aligned_cols=13 Identities=31% Similarity=0.856 Sum_probs=9.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2el4_A 11 KPYGCSQCAKTFSL 24 (46)
T ss_dssp CSEECSSSSCEESS
T ss_pred CceECCCCCchhCC
Confidence 468888 8888754
No 226
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.69 E-value=20 Score=18.73 Aligned_cols=13 Identities=31% Similarity=1.007 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2ytn_A 11 KPYKCNECGKVFTQ 24 (46)
T ss_dssp SSCBCTTTCCBCSS
T ss_pred cCeECCCCCCeeCC
Confidence 367888 8877754
No 227
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.61 E-value=20 Score=18.63 Aligned_cols=13 Identities=31% Similarity=0.772 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2eov_A 11 KPYKCSDCGKSFTW 24 (46)
T ss_dssp CSCBCSSSCCBCSS
T ss_pred CCccCCccChhhCC
Confidence 367888 8877754
No 228
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.51 E-value=19 Score=18.97 Aligned_cols=12 Identities=33% Similarity=0.899 Sum_probs=8.1
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. |+..|-.
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2eom_A 12 GHRCSDCGKFFLQ 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CcCCCCCCCeeCC
Confidence 57777 7777654
No 229
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.51 E-value=22 Score=18.50 Aligned_cols=13 Identities=31% Similarity=0.751 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2emm_A 11 RPHKCNECGKSFIQ 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeeCCCCChhhCC
Confidence 368888 8887754
No 230
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.39 E-value=21 Score=18.57 Aligned_cols=13 Identities=31% Similarity=0.792 Sum_probs=8.6
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 9 k~~~C~~C~k~f~~ 22 (43)
T 2yrm_A 9 GAFFCNECDCRFSE 22 (43)
T ss_dssp CCBCCSSSCCCBSS
T ss_pred CCEECCCCCCeeCC
Confidence 357787 7777643
No 231
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.35 E-value=22 Score=18.55 Aligned_cols=13 Identities=31% Similarity=0.879 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ep2_A 11 KPYECSICGKSFTK 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred cCcCCCCCCcccCC
Confidence 468888 8887754
No 232
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=26.30 E-value=25 Score=22.93 Aligned_cols=26 Identities=27% Similarity=0.668 Sum_probs=19.0
Q ss_pred CCcccccccccccccceeeccCCcccCC
Q psy11667 56 RSRCAQCNAKLTVCSSFTCRCRKLFCPR 83 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~CrCg~~FC~~ 83 (119)
...|..|...+.. +....||..||..
T Consensus 23 ~~~C~IC~~~~~~--p~~~~CgH~fC~~ 48 (116)
T 1rmd_A 23 SISCQICEHILAD--PVETSCKHLFCRI 48 (116)
T ss_dssp HTBCTTTCSBCSS--EEECTTSCEEEHH
T ss_pred CCCCCCCCcHhcC--cEEcCCCCcccHH
Confidence 4579999876543 5566799999963
No 233
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.30 E-value=19 Score=18.80 Aligned_cols=13 Identities=46% Similarity=1.211 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2eoq_A 11 KPFKCDICGKSFCG 24 (46)
T ss_dssp CSCCCSSSCCCCSS
T ss_pred CCcCCCcCCchhCC
Confidence 367888 8877754
No 234
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.19 E-value=22 Score=18.60 Aligned_cols=13 Identities=23% Similarity=0.664 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2em8_A 11 KPYKCVECGKGYKR 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeECcccCchhCC
Confidence 368888 8887754
No 235
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.19 E-value=22 Score=18.55 Aligned_cols=13 Identities=31% Similarity=0.841 Sum_probs=10.0
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2ytg_A 11 KPFKCGECGKSYNQ 24 (46)
T ss_dssp CSEECTTTCCEESS
T ss_pred CCeECCCCCcccCC
Confidence 468898 8888865
No 236
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.14 E-value=22 Score=18.47 Aligned_cols=13 Identities=54% Similarity=1.076 Sum_probs=9.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2en8_A 11 KSHTCDECGKNFCY 24 (46)
T ss_dssp SSEECTTTCCEESS
T ss_pred CCeECCCcCcccCC
Confidence 468888 8888754
No 237
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=26.05 E-value=16 Score=23.03 Aligned_cols=12 Identities=17% Similarity=0.664 Sum_probs=7.3
Q ss_pred CCcccccccccc
Q psy11667 56 RSRCAQCNAKLT 67 (119)
Q Consensus 56 k~RC~~C~kkl~ 67 (119)
..+|..|++.+.
T Consensus 25 ~~~C~~C~~~I~ 36 (89)
T 1x64_A 25 MPLCDKCGSGIV 36 (89)
T ss_dssp CCBCTTTCCBCC
T ss_pred CCCcccCCCEec
Confidence 346777776543
No 238
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.90 E-value=19 Score=18.70 Aligned_cols=13 Identities=31% Similarity=0.912 Sum_probs=8.9
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eq4_A 11 KLYNCKECGKSFSR 24 (46)
T ss_dssp CCCCBTTTTBCCSC
T ss_pred CCeECCCCCCccCc
Confidence 367788 8777654
No 239
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.89 E-value=20 Score=18.69 Aligned_cols=13 Identities=31% Similarity=0.912 Sum_probs=9.3
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2en6_A 11 KPYGCNECGKTFSQ 24 (46)
T ss_dssp CCEEETTTTEEESS
T ss_pred cCeECCCCCcccCc
Confidence 468888 8877754
No 240
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=25.76 E-value=21 Score=18.67 Aligned_cols=13 Identities=31% Similarity=1.002 Sum_probs=9.0
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2emk_A 11 KPYECKECGKAFSQ 24 (46)
T ss_dssp CSCBCSSSCCBCSC
T ss_pred CceECCCCCchhCC
Confidence 367888 8777754
No 241
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=25.71 E-value=22 Score=18.63 Aligned_cols=13 Identities=38% Similarity=0.835 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ely_A 11 KPFKCVECGKGFSR 24 (46)
T ss_dssp CSBCCSSSCCCBSS
T ss_pred CCcccCccCcccCC
Confidence 367888 8877754
No 242
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.65 E-value=19 Score=21.50 Aligned_cols=20 Identities=20% Similarity=0.561 Sum_probs=8.4
Q ss_pred ccccccccccceeeccCCccc
Q psy11667 61 QCNAKLTVCSSFTCRCRKLFC 81 (119)
Q Consensus 61 ~C~kkl~Ls~~f~CrCg~~FC 81 (119)
.|++.|.. ..|.=+=|..||
T Consensus 40 ~C~~~L~~-~~f~~~~g~~yC 59 (72)
T 1x4l_A 40 KCSLSLVG-RGFLTERDDILC 59 (72)
T ss_dssp SSCCBCTT-SCCEECSSSEEC
T ss_pred cCCCcCCC-CccEeECCEEEC
Confidence 34554432 333333344444
No 243
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=25.49 E-value=20 Score=18.71 Aligned_cols=13 Identities=31% Similarity=0.940 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2em0_A 11 KTWKCRECDMCFSQ 24 (46)
T ss_dssp CCCCCSSSCCCCSS
T ss_pred cCeECCCCCcccCC
Confidence 367888 8877754
No 244
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.42 E-value=21 Score=18.63 Aligned_cols=13 Identities=38% Similarity=0.956 Sum_probs=9.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2en1_A 11 KPFKCEECGKRFTQ 24 (46)
T ss_dssp CSEEETTTTEEESS
T ss_pred CCeeCCCCCcccCC
Confidence 468888 8888754
No 245
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=25.41 E-value=23 Score=18.56 Aligned_cols=13 Identities=31% Similarity=0.930 Sum_probs=9.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2el6_A 11 NPYKCSQCEKSFSG 24 (46)
T ss_dssp CSEECSSSSCEESS
T ss_pred CCeECCCCCcccCC
Confidence 368888 8887754
No 246
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.30 E-value=20 Score=21.37 Aligned_cols=8 Identities=25% Similarity=0.933 Sum_probs=3.8
Q ss_pred cccccccc
Q psy11667 58 RCAQCNAK 65 (119)
Q Consensus 58 RC~~C~kk 65 (119)
+|..|++.
T Consensus 7 ~C~~C~~~ 14 (72)
T 1x61_A 7 GCGGCGED 14 (72)
T ss_dssp CCSSSCSC
T ss_pred CCccCCCc
Confidence 45555443
No 247
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=25.28 E-value=19 Score=23.94 Aligned_cols=11 Identities=27% Similarity=0.863 Sum_probs=9.2
Q ss_pred ceeeccCCccc
Q psy11667 71 SFTCRCRKLFC 81 (119)
Q Consensus 71 ~f~CrCg~~FC 81 (119)
.+.||||..|-
T Consensus 30 ~y~CrCGd~F~ 40 (83)
T 1wge_A 30 FYPCPCGDNFA 40 (83)
T ss_dssp EECCSSSSCEE
T ss_pred EEeCCCCCEEE
Confidence 67899999884
No 248
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.24 E-value=22 Score=18.52 Aligned_cols=13 Identities=38% Similarity=0.910 Sum_probs=9.1
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2epz_A 11 KPFDCIDCGKAFSD 24 (46)
T ss_dssp CSBCCTTTCCCBSS
T ss_pred CCeECCCCCceeCC
Confidence 367788 8877754
No 249
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.20 E-value=22 Score=18.60 Aligned_cols=13 Identities=31% Similarity=0.917 Sum_probs=8.8
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ytq_A 11 KPYGCSECGKAFSS 24 (46)
T ss_dssp CSCBCSSSCCBCSC
T ss_pred CCcCCCccChhhCC
Confidence 357787 8777753
No 250
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=24.98 E-value=44 Score=19.87 Aligned_cols=28 Identities=14% Similarity=0.515 Sum_probs=18.3
Q ss_pred CCCcccccccccccc-------------cceeec-cCCcccC
Q psy11667 55 KRSRCAQCNAKLTVC-------------SSFTCR-CRKLFCP 82 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls-------------~~f~Cr-Cg~~FC~ 82 (119)
..-.|..|++..... ..|.|. |+..|-.
T Consensus 7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 48 (96)
T 2dmd_A 7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAAD 48 (96)
T ss_dssp CCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESS
T ss_pred cCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCC
Confidence 346788887654210 268898 8888754
No 251
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.98 E-value=24 Score=18.38 Aligned_cols=13 Identities=31% Similarity=0.879 Sum_probs=9.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ytd_A 11 KPYKCSECGKAFHR 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred cCeECCCCCCeeCC
Confidence 368888 8887754
No 252
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.95 E-value=35 Score=20.77 Aligned_cols=27 Identities=33% Similarity=0.811 Sum_probs=14.9
Q ss_pred cccccccccccccceeeccCCcccCCCC
Q psy11667 58 RCAQCNAKLTVCSSFTCRCRKLFCPRHR 85 (119)
Q Consensus 58 RC~~C~kkl~Ls~~f~CrCg~~FC~~HR 85 (119)
+|..|++.|.. ..|.=+=+..||..|-
T Consensus 45 ~C~~C~~~L~~-~~f~~~~~~~~C~~c~ 71 (82)
T 2ehe_A 45 RCCRCQRSLAD-EPFTCQDSELLCNDCY 71 (82)
T ss_dssp BCTTTCCBCSS-CCEEEETTEEEETTTS
T ss_pred eecCCCCccCC-CccEeeCCEEECHHHH
Confidence 34446666654 4554455666776553
No 253
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.94 E-value=54 Score=19.34 Aligned_cols=29 Identities=21% Similarity=0.444 Sum_probs=18.4
Q ss_pred cCCCcccccccccccc-cceeeccCCcccC
Q psy11667 54 HKRSRCAQCNAKLTVC-SSFTCRCRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls-~~f~CrCg~~FC~ 82 (119)
.....|..|...+... ......||..||.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~ 42 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHR 42 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEH
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecH
Confidence 3355899998876431 1223369999874
No 254
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.91 E-value=22 Score=18.56 Aligned_cols=13 Identities=23% Similarity=0.784 Sum_probs=9.5
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ysp_A 11 KPYKCEKCGKGYNS 24 (46)
T ss_dssp CSEEETTTTEEESC
T ss_pred CCeECCCCCCccCC
Confidence 468888 8887754
No 255
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.91 E-value=24 Score=18.37 Aligned_cols=13 Identities=31% Similarity=0.815 Sum_probs=9.2
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2ep0_A 11 KPYKCDVCHKSFRY 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeeCcccCcccCC
Confidence 367888 8877754
No 256
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=24.68 E-value=62 Score=22.77 Aligned_cols=28 Identities=14% Similarity=0.431 Sum_probs=21.5
Q ss_pred CCcccccccccccccceeec-cCCcccCCCCC
Q psy11667 56 RSRCAQCNAKLTVCSSFTCR-CRKLFCPRHRH 86 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~HR~ 86 (119)
..+|..|..... -+-|- ||.+.|++-.|
T Consensus 34 ~~~C~~C~~~~~---LwlCL~CG~vgCgr~~~ 62 (129)
T 2g45_A 34 GWKCSKCDMREN---LWLNLTDGSILCGRRYF 62 (129)
T ss_dssp BCCCSSSSCCSS---EEEETTTCCEEECCBCT
T ss_pred CCcCccccCcCc---eEEeccCCccccCcccc
Confidence 458999987643 36798 99999997655
No 257
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=24.55 E-value=21 Score=25.95 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=22.8
Q ss_pred cCCCcccc--cccccccc--cceeec-cCCcc-cCCCCCC
Q psy11667 54 HKRSRCAQ--CNAKLTVC--SSFTCR-CRKLF-CPRHRHP 87 (119)
Q Consensus 54 ~~k~RC~~--C~kkl~Ls--~~f~Cr-Cg~~F-C~~HR~p 87 (119)
-.-..|.. |+|||-.. ..+.|- |+..+ =..+||-
T Consensus 41 ~~Y~aC~~~~CnKKv~~~~~g~~~CekC~~~~~~~~~ry~ 80 (181)
T 1l1o_C 41 CMYQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMI 80 (181)
T ss_dssp TEEEBCCSTTCCCBCEEETTTEEEETTTTEEESSCCEEEE
T ss_pred EEECCCCchhcCCccccCCCCeEECCCCCCcCCCceEEEE
Confidence 34458888 99999652 247899 98765 2356653
No 258
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.53 E-value=33 Score=21.92 Aligned_cols=23 Identities=22% Similarity=0.546 Sum_probs=17.4
Q ss_pred CCcccccccccccccceeec-cCCcc
Q psy11667 56 RSRCAQCNAKLTVCSSFTCR-CRKLF 80 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~Cr-Cg~~F 80 (119)
-..|..|+.-+.. +..|. |+..|
T Consensus 15 i~~C~IC~~~i~~--g~~C~~C~h~f 38 (74)
T 2ct0_A 15 VKICNICHSLLIQ--GQSCETCGIRM 38 (74)
T ss_dssp SCBCSSSCCBCSS--SEECSSSCCEE
T ss_pred CCcCcchhhHccc--CCccCCCCchh
Confidence 3579999998754 78886 87764
No 259
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.53 E-value=17 Score=21.85 Aligned_cols=11 Identities=18% Similarity=0.830 Sum_probs=6.4
Q ss_pred CCccccccccc
Q psy11667 56 RSRCAQCNAKL 66 (119)
Q Consensus 56 k~RC~~C~kkl 66 (119)
..+|..|++.+
T Consensus 11 ~~~C~~C~~~I 21 (77)
T 1g47_A 11 SATCERCKGGF 21 (77)
T ss_dssp CCBCSSSCCBC
T ss_pred CCCchhcCCcc
Confidence 34666666655
No 260
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.30 E-value=20 Score=18.65 Aligned_cols=13 Identities=31% Similarity=0.945 Sum_probs=8.7
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. ||..|-.
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ytr_A 11 KPYKCNECGKAFSQ 24 (46)
T ss_dssp CTTCCTTTCCCCSS
T ss_pred cCcCCCCCCCccCC
Confidence 357787 8777643
No 261
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.99 E-value=21 Score=18.53 Aligned_cols=13 Identities=31% Similarity=1.007 Sum_probs=9.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 11 ~~~~C~~C~k~F~~ 24 (46)
T 2eoe_A 11 KPYKCNECGKVFTQ 24 (46)
T ss_dssp CSSEETTTTEECSS
T ss_pred CCeECCCcChhhCC
Confidence 468888 8887754
No 262
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=23.94 E-value=28 Score=22.14 Aligned_cols=24 Identities=13% Similarity=0.278 Sum_probs=15.5
Q ss_pred Ccccccccccccc---cceeec-cCCcc
Q psy11667 57 SRCAQCNAKLTVC---SSFTCR-CRKLF 80 (119)
Q Consensus 57 ~RC~~C~kkl~Ls---~~f~Cr-Cg~~F 80 (119)
-.|..|+..|.+. ....|. ||..|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2jr6_A 9 LVCPVTKGRLEYHQDKQELWSRQAKLAY 36 (68)
T ss_dssp CBCSSSCCBCEEETTTTEEEETTTTEEE
T ss_pred eECCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 4799999888763 234565 65443
No 263
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=23.64 E-value=29 Score=24.30 Aligned_cols=24 Identities=21% Similarity=0.459 Sum_probs=18.0
Q ss_pred CcccccccccccccceeeccCCcccC
Q psy11667 57 SRCAQCNAKLTVCSSFTCRCRKLFCP 82 (119)
Q Consensus 57 ~RC~~C~kkl~Ls~~f~CrCg~~FC~ 82 (119)
..|..|...+.. +..-.||..||.
T Consensus 79 ~~C~IC~~~~~~--pv~~~CgH~fC~ 102 (150)
T 1z6u_A 79 FMCVCCQELVYQ--PVTTECFHNVCK 102 (150)
T ss_dssp TBCTTTSSBCSS--EEECTTSCEEEH
T ss_pred CEeecCChhhcC--CEEcCCCCchhH
Confidence 479999876543 555679999986
No 264
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=23.39 E-value=23 Score=19.12 Aligned_cols=13 Identities=46% Similarity=0.853 Sum_probs=8.4
Q ss_pred cceeec-cCCcccC
Q psy11667 70 SSFTCR-CRKLFCP 82 (119)
Q Consensus 70 ~~f~Cr-Cg~~FC~ 82 (119)
..|.|. |+..|-.
T Consensus 3 ~~~~C~~C~~~f~~ 16 (57)
T 3uk3_C 3 SSRECSYCGKFFRS 16 (57)
T ss_dssp --CBCTTTCCBCSC
T ss_pred CCccCCCCcchhCC
Confidence 367888 8888754
No 265
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=22.74 E-value=30 Score=21.98 Aligned_cols=24 Identities=25% Similarity=0.566 Sum_probs=15.8
Q ss_pred Ccccccccccccc---cceeec-cCCcc
Q psy11667 57 SRCAQCNAKLTVC---SSFTCR-CRKLF 80 (119)
Q Consensus 57 ~RC~~C~kkl~Ls---~~f~Cr-Cg~~F 80 (119)
-.|..|+..|.+. ....|. ||..|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2hf1_A 9 LVCPLCKGPLVFDKSKDELICKGDRLAF 36 (68)
T ss_dssp CBCTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred eECCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 3788999887763 235676 65544
No 266
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.68 E-value=30 Score=20.68 Aligned_cols=28 Identities=18% Similarity=0.515 Sum_probs=18.2
Q ss_pred CcCCCcccccccccccc---cceeec-cCCcc
Q psy11667 53 KHKRSRCAQCNAKLTVC---SSFTCR-CRKLF 80 (119)
Q Consensus 53 ~~~k~RC~~C~kkl~Ls---~~f~Cr-Cg~~F 80 (119)
.....-|..|+..+-+. ..+.|. ||.++
T Consensus 16 ~~~~k~CP~CG~~~fm~~~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 16 IRKNKFCPRCGPGVFMADHGDRWACGKCGYTE 47 (50)
T ss_dssp ECSSEECSSSCSSCEEEECSSEEECSSSCCEE
T ss_pred EEecccCCCCCCceEEecCCCeEECCCCCCEE
Confidence 34566788898755442 356787 87765
No 267
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.67 E-value=23 Score=18.58 Aligned_cols=12 Identities=33% Similarity=0.894 Sum_probs=8.0
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. |+..|-.
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytm_A 12 PYKCMECGKAFGD 24 (46)
T ss_dssp SSSBTTTTBCCSS
T ss_pred CcCCCCCCchhCC
Confidence 57777 7776643
No 268
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.45 E-value=15 Score=22.60 Aligned_cols=11 Identities=18% Similarity=0.709 Sum_probs=6.8
Q ss_pred CCccccccccc
Q psy11667 56 RSRCAQCNAKL 66 (119)
Q Consensus 56 k~RC~~C~kkl 66 (119)
..+|..|++.+
T Consensus 15 ~~~C~~C~~~I 25 (79)
T 1x62_A 15 LPMCDKCGTGI 25 (79)
T ss_dssp CCCCSSSCCCC
T ss_pred CCccccCCCCc
Confidence 45677776654
No 269
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=22.39 E-value=95 Score=18.40 Aligned_cols=30 Identities=17% Similarity=0.382 Sum_probs=18.8
Q ss_pred cCCCccccccccccccc-ceeeccCCcccCC
Q psy11667 54 HKRSRCAQCNAKLTVCS-SFTCRCRKLFCPR 83 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~-~f~CrCg~~FC~~ 83 (119)
.....|..|...+.... ...-.||..||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~ 43 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDS 43 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETT
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHH
Confidence 34568999987664311 1223599998864
No 270
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=22.28 E-value=29 Score=23.93 Aligned_cols=25 Identities=32% Similarity=0.575 Sum_probs=17.6
Q ss_pred Ccccccccccccc-------cceeec-cCCccc
Q psy11667 57 SRCAQCNAKLTVC-------SSFTCR-CRKLFC 81 (119)
Q Consensus 57 ~RC~~C~kkl~Ls-------~~f~Cr-Cg~~FC 81 (119)
.-|..|+--|.+. +.|.|+ ||+.+=
T Consensus 5 ~FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~~ 37 (122)
T 1twf_I 5 RFCRDCNNMLYPREDKENNRLLFECRTCSYVEE 37 (122)
T ss_dssp CBCSSSCCBCEEEEETTTTEEEEECSSSSCEEE
T ss_pred CcccccCccCcccccCcCCCCEEECCcCCCeee
Confidence 3578888766642 368999 988764
No 271
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=21.94 E-value=47 Score=20.26 Aligned_cols=32 Identities=25% Similarity=0.473 Sum_probs=19.8
Q ss_pred Ccccccccccccc-----cceeec-cCCcccCCCCCCC
Q psy11667 57 SRCAQCNAKLTVC-----SSFTCR-CRKLFCPRHRHPE 88 (119)
Q Consensus 57 ~RC~~C~kkl~Ls-----~~f~Cr-Cg~~FC~~HR~pe 88 (119)
.+|..|++.+..+ -+.+|- ||+..=-+-|-|.
T Consensus 4 Y~C~rCg~~fs~~el~~lP~IrCpyCGyrii~KvR~p~ 41 (48)
T 4ayb_P 4 YRCGKCWKTFTDEQLKVLPGVRCPYCGYKIIFMVRKPT 41 (48)
T ss_dssp -CCCCTTTTCCCCCSCCCSSSCCTTTCCSCEECCCCCS
T ss_pred EEeeccCCCccHHHHhhCCCcccCccCcEEEEEecCCc
Confidence 4677777755432 377885 8877666666553
No 272
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=21.81 E-value=28 Score=18.81 Aligned_cols=11 Identities=18% Similarity=0.591 Sum_probs=7.4
Q ss_pred eeec-cCCcccC
Q psy11667 72 FTCR-CRKLFCP 82 (119)
Q Consensus 72 f~Cr-Cg~~FC~ 82 (119)
|.|. |+..|-.
T Consensus 2 ~~C~~C~~~f~~ 13 (57)
T 1bbo_A 2 YICEECGIRXKK 13 (57)
T ss_dssp CBCTTTCCBCSS
T ss_pred CcCCCCcCcCCC
Confidence 6677 7777643
No 273
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=21.62 E-value=22 Score=21.74 Aligned_cols=10 Identities=20% Similarity=0.953 Sum_probs=5.2
Q ss_pred Cccccccccc
Q psy11667 57 SRCAQCNAKL 66 (119)
Q Consensus 57 ~RC~~C~kkl 66 (119)
.+|..|++.+
T Consensus 8 ~~C~~C~~~I 17 (81)
T 1a7i_A 8 NKCGACGRTV 17 (81)
T ss_dssp CBCSSSCCBC
T ss_pred CcCcCcCccc
Confidence 3555555544
No 274
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.62 E-value=25 Score=18.26 Aligned_cols=12 Identities=25% Similarity=0.753 Sum_probs=8.2
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. |+..|-.
T Consensus 10 ~~~C~~C~k~f~~ 22 (45)
T 2epq_A 10 PYSCPVCGLRFKR 22 (45)
T ss_dssp SSEETTTTEECSC
T ss_pred CCcCCCCCcccCC
Confidence 57787 7777643
No 275
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=21.60 E-value=35 Score=21.75 Aligned_cols=24 Identities=13% Similarity=0.454 Sum_probs=15.7
Q ss_pred Ccccccccccccc---cceeec-cCCcc
Q psy11667 57 SRCAQCNAKLTVC---SSFTCR-CRKLF 80 (119)
Q Consensus 57 ~RC~~C~kkl~Ls---~~f~Cr-Cg~~F 80 (119)
-.|..|+..|.+. ....|. ||..|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (69)
T 2pk7_A 9 LACPICKGPLKLSADKTELISKGAGLAY 36 (69)
T ss_dssp CCCTTTCCCCEECTTSSEEEETTTTEEE
T ss_pred eeCCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 4788999888763 235676 65544
No 276
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.46 E-value=23 Score=21.03 Aligned_cols=9 Identities=22% Similarity=0.992 Sum_probs=4.1
Q ss_pred ccccccccc
Q psy11667 58 RCAQCNAKL 66 (119)
Q Consensus 58 RC~~C~kkl 66 (119)
+|..|++.+
T Consensus 7 ~C~~C~~~I 15 (72)
T 1x4k_A 7 GCQECKKTI 15 (72)
T ss_dssp CBSSSCCCC
T ss_pred CCccCCCcc
Confidence 444444433
No 277
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=21.31 E-value=45 Score=22.00 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=22.1
Q ss_pred ccccCCcCCCcccccccccccccceeec-cCCc
Q psy11667 48 CVKKTKHKRSRCAQCNAKLTVCSSFTCR-CRKL 79 (119)
Q Consensus 48 ~~~~~~~~k~RC~~C~kkl~Ls~~f~Cr-Cg~~ 79 (119)
.....+.+--||+.|-+-....+-.-|- ||+.
T Consensus 7 ~Ir~~k~~iLrC~aCf~~t~~~~k~FCp~CGn~ 39 (79)
T 2con_A 7 GVREARSYILRCHGCFKTTSDMNRVFCGHCGNK 39 (79)
T ss_dssp CCCCCCCEEEECSSSCCEESCSSCCSCSSSCCS
T ss_pred EeeeeeeeeeEecccceECCCcccccccccCcc
Confidence 3445567778999999865543556687 8764
No 278
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.31 E-value=51 Score=20.24 Aligned_cols=28 Identities=32% Similarity=0.637 Sum_probs=17.8
Q ss_pred cCCCccccccccccc-------------ccceeec-cCCcccC
Q psy11667 54 HKRSRCAQCNAKLTV-------------CSSFTCR-CRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~L-------------s~~f~Cr-Cg~~FC~ 82 (119)
.+...| .|++.... ...|.|. |+..|-.
T Consensus 8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 49 (110)
T 2csh_A 8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKM 49 (110)
T ss_dssp CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESS
T ss_pred CCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCC
Confidence 345678 78765421 0268898 8888754
No 279
>2xoc_A E3 ubiquitin-protein ligase CHFR; zinc-binding, poly(ADP-ribose) mitosis, antephase checkpoint, cell cycle; HET: PGE ADP ADE; 1.89A {Homo sapiens} PDB: 2xoy_A* 2xoz_A* 2xp0_A
Probab=21.21 E-value=45 Score=26.59 Aligned_cols=27 Identities=22% Similarity=0.573 Sum_probs=20.1
Q ss_pred ccccccccccc----------ccceeec-cCCcccCCC
Q psy11667 58 RCAQCNAKLTV----------CSSFTCR-CRKLFCPRH 84 (119)
Q Consensus 58 RC~~C~kkl~L----------s~~f~Cr-Cg~~FC~~H 84 (119)
.|..|...+.+ ..+.+|- |...||..-
T Consensus 81 ~C~~C~~~MP~R~~~~~~~~~~~pq~C~iC~r~FC~lY 118 (261)
T 2xoc_A 81 LCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFCHLY 118 (261)
T ss_dssp ECTTTCCEEECCHHHHHTCTTSCCCBCTTTCCBCCHHH
T ss_pred CcCcccCcCCCCCccccccCCCCCCCCCCcCccccCcc
Confidence 45568887665 2378999 999999554
No 280
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A
Probab=21.16 E-value=16 Score=29.38 Aligned_cols=34 Identities=26% Similarity=0.549 Sum_probs=22.1
Q ss_pred CCcccccccccccccceeec-cCCcccCCCCCCCCC
Q psy11667 56 RSRCAQCNAKLTVCSSFTCR-CRKLFCPRHRHPEEH 90 (119)
Q Consensus 56 k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~HR~pe~H 90 (119)
..+|..|...-.. .-+-|- ||.+.|+.+++.-.|
T Consensus 48 ~~~C~~c~~~~~~-~~~~cl~cg~~~c~~~~h~~~H 82 (476)
T 3mhs_A 48 TMKCGTCHEINSG-ATFMCLQCGFCGCWNHSHFLSH 82 (476)
T ss_dssp HSBCTTTCCBCSS-SEEEESSSSCEEETTTTHHHHH
T ss_pred CCCcccccCCCCC-CceEeCCCCCCccCCchHHHHH
Confidence 3469999764212 457899 999999864443333
No 281
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.13 E-value=23 Score=21.01 Aligned_cols=6 Identities=33% Similarity=0.805 Sum_probs=2.5
Q ss_pred cccccc
Q psy11667 62 CNAKLT 67 (119)
Q Consensus 62 C~kkl~ 67 (119)
|++.|.
T Consensus 39 C~~~L~ 44 (72)
T 1wyh_A 39 CEQPLG 44 (72)
T ss_dssp TCCBTT
T ss_pred CCCcCC
Confidence 444443
No 282
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.03 E-value=25 Score=18.33 Aligned_cols=12 Identities=33% Similarity=0.941 Sum_probs=7.5
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. |+..|-.
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytt_A 12 PYQCSECGKSFSG 24 (46)
T ss_dssp TTCCSSSCCCCSS
T ss_pred CeeCCCCCcccCC
Confidence 56677 7766643
No 283
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=20.81 E-value=30 Score=18.93 Aligned_cols=12 Identities=42% Similarity=1.124 Sum_probs=8.6
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|.|. |+..|-.
T Consensus 2 ~~~C~~C~~~f~~ 14 (60)
T 2adr_A 2 SFVCEVCTRAFAR 14 (60)
T ss_dssp CBCCTTTCCCBSC
T ss_pred cCcCCCCccccCC
Confidence 47788 8887753
No 284
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.79 E-value=31 Score=18.89 Aligned_cols=29 Identities=14% Similarity=0.246 Sum_probs=18.8
Q ss_pred cCCCccccccccccc-----------c---cceeec-cCCcccC
Q psy11667 54 HKRSRCAQCNAKLTV-----------C---SSFTCR-CRKLFCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~L-----------s---~~f~Cr-Cg~~FC~ 82 (119)
.+...|..|.+.... . ..|.|. |+..|-.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence 445688888764211 0 268999 9888854
No 285
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=20.77 E-value=64 Score=28.96 Aligned_cols=30 Identities=13% Similarity=0.407 Sum_probs=22.7
Q ss_pred CCCcccccccccccccceeec-cCCcccCCCCCC
Q psy11667 55 KRSRCAQCNAKLTVCSSFTCR-CRKLFCPRHRHP 87 (119)
Q Consensus 55 ~k~RC~~C~kkl~Ls~~f~Cr-Cg~~FC~~HR~p 87 (119)
...+|..|.....| .-|- ||.+.|++..|.
T Consensus 214 ~~~~C~~c~~~~~l---w~CL~Cg~vgC~r~~~~ 244 (854)
T 3ihp_A 214 CGWKCSKCDMRENL---WLNLTDGSILCGRRYFD 244 (854)
T ss_dssp SCCCCSSSCCCSSE---EEETTTCCEEECCBC-C
T ss_pred CCCcCcCcCCcCce---EEEecCCCccccccccC
Confidence 34689999886644 6798 999999977664
No 286
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.47 E-value=30 Score=18.35 Aligned_cols=11 Identities=36% Similarity=1.032 Sum_probs=7.5
Q ss_pred ceeec-cCCccc
Q psy11667 71 SFTCR-CRKLFC 81 (119)
Q Consensus 71 ~f~Cr-Cg~~FC 81 (119)
.|.|. |+..|-
T Consensus 12 ~~~C~~C~k~f~ 23 (48)
T 2epr_A 12 QVACEICGKIFR 23 (48)
T ss_dssp SEEETTTTEEES
T ss_pred CeeCCCCCcccC
Confidence 56777 777764
No 287
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=20.41 E-value=73 Score=18.94 Aligned_cols=25 Identities=32% Similarity=0.830 Sum_probs=16.9
Q ss_pred cCCCcccccccccccccceeec-cCCc-ccC
Q psy11667 54 HKRSRCAQCNAKLTVCSSFTCR-CRKL-FCP 82 (119)
Q Consensus 54 ~~k~RC~~C~kkl~Ls~~f~Cr-Cg~~-FC~ 82 (119)
.....|..|++. ....|. |..+ ||+
T Consensus 13 ~~~~~C~~C~~~----~~~~Cs~C~~v~YCs 39 (60)
T 2dj8_A 13 DSSESCWNCGRK----ASETCSGCNTARYCG 39 (60)
T ss_dssp CCSCCCSSSCSC----CCEECTTTSCCEESS
T ss_pred CCCcccccCCCC----CcccCCCCCCEeeeC
Confidence 345699999983 246787 7664 665
No 288
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.37 E-value=28 Score=21.39 Aligned_cols=12 Identities=33% Similarity=0.891 Sum_probs=7.8
Q ss_pred ceeec-cCCcccC
Q psy11667 71 SFTCR-CRKLFCP 82 (119)
Q Consensus 71 ~f~Cr-Cg~~FC~ 82 (119)
.|+|. |++.|-.
T Consensus 13 py~C~~CgK~F~~ 25 (66)
T 2epp_A 13 ILPCGLCGKVFTD 25 (66)
T ss_dssp CCCCTTTCCCCSC
T ss_pred CcCCCCCCCccCC
Confidence 56777 7776654
No 289
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.19 E-value=24 Score=22.20 Aligned_cols=13 Identities=23% Similarity=0.754 Sum_probs=8.0
Q ss_pred CCCcccccccccc
Q psy11667 55 KRSRCAQCNAKLT 67 (119)
Q Consensus 55 ~k~RC~~C~kkl~ 67 (119)
...+|..|++.+.
T Consensus 14 ~~~~C~~C~~~I~ 26 (91)
T 2d8y_A 14 ARETCVECQKTVY 26 (91)
T ss_dssp SSCBCTTTCCBCC
T ss_pred CCCcCccCCCccC
Confidence 3456777776553
No 290
>4gop_C Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=20.07 E-value=24 Score=28.72 Aligned_cols=32 Identities=28% Similarity=0.736 Sum_probs=21.7
Q ss_pred CCcccc--cccccccc-c-ceeec-cCCcc-cCCCCCC
Q psy11667 56 RSRCAQ--CNAKLTVC-S-SFTCR-CRKLF-CPRHRHP 87 (119)
Q Consensus 56 k~RC~~--C~kkl~Ls-~-~f~Cr-Cg~~F-C~~HR~p 87 (119)
-..|.. |+|||... . .|.|. |+..+ =..+||-
T Consensus 308 Y~aC~~~~C~kkv~~~~~g~~~C~~C~~~~~~~~~ry~ 345 (444)
T 4gop_C 308 YTACASEGCNKKVNLDHENNWRCEKCDRSYATPEYRYI 345 (444)
T ss_dssp EEECCSTTCCCBEEECTTSCEEETTTTEEESSCEEEEC
T ss_pred EccCCcccCCCccccCCCccEECCCCCCcCccccEEEE
Confidence 358888 99999652 2 38998 88664 3455663
No 291
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=20.03 E-value=61 Score=18.53 Aligned_cols=26 Identities=19% Similarity=0.599 Sum_probs=17.8
Q ss_pred CCccccccc-cccc---ccceeec-cCCccc
Q psy11667 56 RSRCAQCNA-KLTV---CSSFTCR-CRKLFC 81 (119)
Q Consensus 56 k~RC~~C~k-kl~L---s~~f~Cr-Cg~~FC 81 (119)
...|..|+. .|.. .....|. ||.+|=
T Consensus 5 ~~~CP~C~~~~l~~d~~~gelvC~~CG~v~~ 35 (50)
T 1pft_A 5 QKVCPACESAELIYDPERGEIVCAKCGYVIE 35 (50)
T ss_dssp CCSCTTTSCCCEEEETTTTEEEESSSCCBCC
T ss_pred cEeCcCCCCcceEEcCCCCeEECcccCCccc
Confidence 347999987 5543 1357898 988763
Done!