RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11667
         (119 letters)



>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 85

 Score = 76.8 bits (189), Expect = 2e-20
 Identities = 24/65 (36%), Positives = 32/65 (49%)

Query: 49  VKKTKHKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGRHLLAATN 108
           ++  K     C  C  K  + +SF CRC   FC  HR+ E H C +DYK+ GR  L   N
Sbjct: 18  LQTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEAN 77

Query: 109 PLVVA 113
           P+   
Sbjct: 78  PVSGP 82


>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing
           protein At2g36320 {Thale cress (Arabidopsis thaliana)
           [TaxId: 3702]}
          Length = 64

 Score = 61.8 bits (150), Expect = 7e-15
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 50  KKTKHKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGR 101
                + +RC  C  ++ + + F CRC   FC  HR+PE H CTFD+K+ G 
Sbjct: 9   PSPPQRPNRCTVCRKRVGL-TGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGS 59


>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2
           {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 74

 Score = 59.9 bits (145), Expect = 5e-14
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 50  KKTKHKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGR 101
           +  K K++RC  C  K+ + + F CRC  LFC  HR+ ++H C +DYKA   
Sbjct: 19  ELPKPKKNRCFMCRKKVGL-TGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS 69


>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing
           protein At1g12440 {Thale cress (Arabidopsis thaliana)
           [TaxId: 3702]}
          Length = 74

 Score = 59.9 bits (145), Expect = 6e-14
 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 49  VKKTKHKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGR 101
           +   K   +RC  CN K+ V + F CRC   FC  HR+PE H C FD+K    
Sbjct: 18  LDPPKSTATRCLSCNKKVGV-TGFKCRCGSTFCGTHRYPESHECQFDFKGVAS 69


>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus
          musculus) [TaxId: 10090]}
          Length = 86

 Score = 36.9 bits (85), Expect = 6e-05
 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 42 TTVAGGCVKKTKHKRSRCAQCNAKLTVCSSFTC-RCRKLFCPRHRHPEEHACT 93
            V     K  +HK   C+          +  C  C K FC RHRH  +H C 
Sbjct: 11 VNVVKERPKTDEHKSYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCE 63


>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant
           x100 [TaxId: 105351]}
          Length = 472

 Score = 28.5 bits (63), Expect = 0.21
 Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 4/38 (10%)

Query: 10  TSVRAISKDLPPSTPRPGKNSPAGGKPTTAGGTTVAGG 47
           T+    +  +PPS      +S     P T   T+ +G 
Sbjct: 423 TANNRRNSVVPPSWGETSASSV----PGTCAATSASGT 456


>d2d8ya2 g.39.1.3 (A:44-85) Eplin, LIMA1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 42

 Score = 23.9 bits (52), Expect = 1.7
 Identities = 8/27 (29%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 58 RCAQCNAKLTVCSSFTCRCRKLFCPRH 84
          RC+ CN KL++  ++     +++C  H
Sbjct: 1  RCSYCNNKLSL-GTYASLHGRIYCKPH 26


>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae)
           [TaxId: 5062]}
          Length = 323

 Score = 24.5 bits (52), Expect = 4.6
 Identities = 5/34 (14%), Positives = 8/34 (23%), Gaps = 1/34 (2%)

Query: 69  CSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGRH 102
             S        + P     +    T+    YG  
Sbjct: 46  TPSSERSGHDYYTPGSSAQKIDGATWSIS-YGDG 78


>d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays)
           [TaxId: 4577]}
          Length = 160

 Score = 23.7 bits (50), Expect = 5.9
 Identities = 17/110 (15%), Positives = 25/110 (22%), Gaps = 7/110 (6%)

Query: 7   RSNTSVRAISKDLPPSTPRPGKNSPAGGKPTTAGGT-------TVAGGCVKKTKHKRSRC 59
           R N+ VR IS+    S    G +          G         T++ G            
Sbjct: 4   RDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEE 63

Query: 60  AQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKAYGRHLLAATNP 109
                K            K        P     TF       H +  ++ 
Sbjct: 64  VFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDE 113


>d1pd0a5 g.41.10.1 (A:216-300) Sec24 {Baker's yeast (Saccharomyces
          cerevisiae) [TaxId: 4932]}
          Length = 85

 Score = 22.9 bits (49), Expect = 6.8
 Identities = 9/45 (20%), Positives = 12/45 (26%)

Query: 54 HKRSRCAQCNAKLTVCSSFTCRCRKLFCPRHRHPEEHACTFDYKA 98
           +R RC  C     V              R+   E      +Y A
Sbjct: 33 GRRWRCNFCRLANDVPMQMDQSDPNDPKSRYDRNEIKCAVMEYMA 77


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.131    0.418 

Gapped
Lambda     K      H
   0.267   0.0551    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 444,266
Number of extensions: 19918
Number of successful extensions: 87
Number of sequences better than 10.0: 1
Number of HSP's gapped: 84
Number of HSP's successfully gapped: 28
Length of query: 119
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 45
Effective length of database: 1,391,576
Effective search space: 62620920
Effective search space used: 62620920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.3 bits)