Query psy11674
Match_columns 161
No_of_seqs 220 out of 652
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 15:59:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11674.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11674hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m1i_B RAN-specific GTPase-act 100.0 3.1E-42 1.1E-46 274.5 11.3 116 2-160 43-159 (191)
2 4hat_B RAN-specific GTPase-act 100.0 4.3E-42 1.5E-46 262.3 10.5 107 11-160 1-108 (140)
3 1rrp_B Nuclear pore complex pr 100.0 1.1E-41 3.6E-46 258.0 11.8 106 13-160 1-106 (134)
4 1k5d_B RAN-specific GTPase-act 100.0 3.7E-41 1.3E-45 270.5 11.6 117 3-160 16-133 (201)
5 1xke_A RAN-binding protein 2; 100.0 5.4E-35 1.9E-39 220.2 11.4 90 71-160 1-92 (130)
6 2crf_A RAN binding protein 3; 100.0 3.3E-34 1.1E-38 220.8 11.0 102 15-160 8-113 (150)
7 2y8g_A Ranbp3-B, RAN-binding p 100.0 8.3E-34 2.8E-38 215.8 8.7 95 23-161 4-102 (138)
8 3n7c_A ABR034WP; nuclear pore 100.0 9.4E-33 3.2E-37 208.2 7.4 94 24-160 1-95 (130)
9 2ec1_A Nucleoporin 50 kDa; ran 100.0 5.7E-31 2E-35 197.2 8.8 89 69-159 4-94 (125)
10 1xke_A RAN-binding protein 2; 99.5 2E-14 6.8E-19 107.7 4.7 45 27-71 1-47 (130)
11 2ec1_A Nucleoporin 50 kDa; ran 99.5 7.5E-14 2.6E-18 104.1 6.3 41 25-65 4-44 (125)
12 1qc6_A EVH1 domain from ENA/VA 99.2 9.3E-11 3.2E-15 87.7 8.8 75 76-152 2-83 (130)
13 1ddw_A GLGF-domain protein hom 98.7 6.8E-08 2.3E-12 71.4 8.6 73 76-152 2-79 (120)
14 1i2h_A PSD-ZIP45(homer-1C/VESL 98.5 2.3E-07 7.9E-12 72.2 7.9 74 76-153 7-85 (168)
15 1rrp_B Nuclear pore complex pr 98.2 1.3E-06 4.5E-11 65.2 5.2 61 60-129 4-65 (134)
16 3n7c_A ABR034WP; nuclear pore 98.1 1.6E-06 5.4E-11 64.7 3.8 52 69-129 2-55 (130)
17 4hat_B RAN-specific GTPase-act 98.1 2.3E-06 7.8E-11 64.7 4.5 59 61-129 7-66 (140)
18 1evh_A WH1 domain, protein (ME 98.1 1.6E-05 5.5E-10 57.8 8.4 74 77-152 3-82 (112)
19 1k5d_B RAN-specific GTPase-act 98.0 3.9E-06 1.3E-10 66.9 4.9 61 60-128 29-90 (201)
20 3m1i_B RAN-specific GTPase-act 98.0 3.8E-06 1.3E-10 66.6 4.7 68 52-129 49-117 (191)
21 1egx_A VAsp, vasodilator-stimu 98.0 1.5E-05 5.1E-10 58.2 7.4 74 77-152 3-84 (115)
22 2crf_A RAN binding protein 3; 98.0 6.3E-06 2.2E-10 62.8 5.4 55 65-128 14-73 (150)
23 2y8g_A Ranbp3-B, RAN-binding p 98.0 4.4E-06 1.5E-10 62.8 3.7 53 68-129 5-62 (138)
24 1xod_A Spred1; sprouty, EVH1, 97.7 0.00012 3.9E-09 53.7 6.9 75 76-152 2-86 (118)
25 2jp2_A Spred-2, sprouty-relate 97.5 0.00046 1.6E-08 51.1 8.1 76 75-152 10-95 (126)
26 3syx_A Sprouty-related, EVH1 d 96.1 0.025 8.4E-07 42.1 7.9 71 79-151 12-92 (130)
27 1qc6_A EVH1 domain from ENA/VA 95.6 0.0098 3.3E-07 43.8 3.8 26 32-57 2-29 (130)
28 1ddw_A GLGF-domain protein hom 92.1 0.13 4.4E-06 37.4 3.7 30 32-61 2-34 (120)
29 1i2h_A PSD-ZIP45(homer-1C/VESL 88.9 0.25 8.5E-06 38.1 2.9 31 31-61 6-39 (168)
30 1mke_A WIP - N-WAsp, fusion pr 82.1 12 0.00041 28.1 9.2 69 79-151 42-113 (152)
31 2lyd_A Decapping protein 1; DC 75.5 13 0.00044 27.2 7.5 58 82-141 35-96 (134)
32 2ifs_A N-WAsp, wiskott-aldrich 73.2 12 0.00041 28.5 7.0 69 79-151 59-130 (169)
33 2qkl_A DCP1 protein, SPBC3B9.2 57.6 26 0.0009 25.3 5.9 57 82-141 30-90 (127)
34 1evh_A WH1 domain, protein (ME 54.9 16 0.00054 25.7 4.2 33 32-64 2-40 (112)
35 1egx_A VAsp, vasodilator-stimu 50.0 14 0.00047 26.2 3.3 33 32-64 2-41 (115)
36 1xod_A Spred1; sprouty, EVH1, 37.1 21 0.00072 25.3 2.5 28 32-59 2-31 (118)
37 2jp2_A Spred-2, sprouty-relate 31.5 41 0.0014 24.2 3.3 29 31-59 10-40 (126)
No 1
>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-42 Score=274.46 Aligned_cols=116 Identities=45% Similarity=0.735 Sum_probs=92.5
Q ss_pred CCcCCCCCCCCCccccccCCCccccccccccceeeeeeeceeeeeeccceeeecccceeeecccCCCccccCCCcceeeE
Q psy11674 2 ETTANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVTTGEENETVLF 81 (161)
Q Consensus 2 ~~~~~~~~~~~~f~pv~~l~~~v~v~tgEE~E~~~f~~r~kl~~~~~~~wkerGvg~~kl~~~~~t~~i~tGEE~E~~lf 81 (161)
++.+++++|++||+|||+|+ +|+|+||||+|+++|+.|||||+|+..
T Consensus 43 ~~~~~ee~~~~~f~Pvv~L~-~vev~tGEEdEe~lf~~RaKLf~f~~~-------------------------------- 89 (191)
T 3m1i_B 43 EGDDAPESPDIHFEPVVHLE-KVDVKTMEEDEEVLYKVRAKLFRFDAD-------------------------------- 89 (191)
T ss_dssp ------------------CC-CCCCCCSCTTEEEEEEEEEEEEEEETT--------------------------------
T ss_pred cccccccCCCCCcccceecc-cccccCCCcceeeeeEEeeEEEEEecC--------------------------------
Confidence 45667899999999999995 899999999999999999999999852
Q ss_pred EeeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEEEe-eecCCCCC
Q psy11674 82 EQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFA-QDYADEVV 160 (161)
Q Consensus 82 ~~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w~a-~D~sd~~~ 160 (161)
+++|++||+|.||||+|++++++|||||+|+++||||||+|+++|+++++.+++++|+|++ .|||||+|
T Consensus 90 ----------~~~WKERGvG~lkilk~ket~k~RllMR~d~~~kV~LN~~I~~~m~~~~~~~sdks~v~~~~~D~sdge~ 159 (191)
T 3m1i_B 90 ----------AKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEA 159 (191)
T ss_dssp ----------TTEEEEEEEEEEEEEEETTTCCEEEEEECTTTCCEEEEEECCTTCCCBCCTTCSSEEEEEEEEECTTSSC
T ss_pred ----------CCCccceeEEEEEEEEcCCCCeEEEEEEecCcceEEEeeecCCCcEEeECCCCCceEEEEecCcCCCCCc
Confidence 3578899999999999999999999999999999999999999999999999999999997 89999985
No 2
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=100.00 E-value=4.3e-42 Score=262.28 Aligned_cols=107 Identities=47% Similarity=0.768 Sum_probs=84.0
Q ss_pred CCCccccccCCCccccccccccceeeeeeeceeeeeeccceeeecccceeeecccCCCccccCCCcceeeEEeeeeEeee
Q psy11674 11 LPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVTTGEENETVLFEQRAKLYRF 90 (161)
Q Consensus 11 ~~~f~pv~~l~~~v~v~tgEE~E~~~f~~r~kl~~~~~~~wkerGvg~~kl~~~~~t~~i~tGEE~E~~lf~~raKL~~~ 90 (161)
|+||+|||+|+ +|+++||||||+++|+.|||||+|+..
T Consensus 1 ~~~f~pvv~l~-~vev~tGEE~E~~lf~~raKLf~f~~~----------------------------------------- 38 (140)
T 4hat_B 1 DIHFEPVVHLE-KVDVKTMEEDEEVLYKVRAKLFRFDKD----------------------------------------- 38 (140)
T ss_dssp -------------------CTTEEEEEEEEEEEEEEETT-----------------------------------------
T ss_pred CCcccceeEcc-eecccCCCcCeeEEEEEeEEEEEEcCC-----------------------------------------
Confidence 57999999995 899999999999999999999999852
Q ss_pred eccceeeeccceeeeeecCCCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEEEe-eecCCCCC
Q psy11674 91 VDKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFA-QDYADEVV 160 (161)
Q Consensus 91 ~~~~WkerGvG~lkil~~~~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w~a-~D~sd~~~ 160 (161)
+++|+|||+|+||||+|++++++|||||+|+++||||||+|+|+|+++++.+++++|+|++ .|||||+|
T Consensus 39 -~~~WkerG~G~lkilk~k~~~k~RllmR~d~~~kv~lN~~i~~~m~~~~~~~s~k~~v~~~~~D~sdg~~ 108 (140)
T 4hat_B 39 -AKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEA 108 (140)
T ss_dssp -TTEEEEEEEEEEEEEEETTTCCEEEEEECTTTCCEEEEEECCTTCCCBCCTTCSSEEEEEEEEECTTSSC
T ss_pred -CCCcccccEEEEEEEEcCCCCeEEEEEEecCcceEEEEeEecCCeEEeEcCCCCceEEEEccccCCCCCC
Confidence 3578899999999999999999999999999999999999999999999999999999995 89999985
No 3
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=100.00 E-value=1.1e-41 Score=257.97 Aligned_cols=106 Identities=53% Similarity=1.032 Sum_probs=101.0
Q ss_pred CccccccCCCccccccccccceeeeeeeceeeeeeccceeeecccceeeecccCCCccccCCCcceeeEEeeeeEeeeec
Q psy11674 13 DFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVTTGEENETVLFEQRAKLYRFVD 92 (161)
Q Consensus 13 ~f~pv~~l~~~v~v~tgEE~E~~~f~~r~kl~~~~~~~wkerGvg~~kl~~~~~t~~i~tGEE~E~~lf~~raKL~~~~~ 92 (161)
||+|||+||++|+++||||+|+++|+.|||||+|++. +
T Consensus 1 ~~~pi~~l~~~vev~tGEE~E~~lf~~raKL~~~~~~------------------------------------------~ 38 (134)
T 1rrp_B 1 HFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVE------------------------------------------S 38 (134)
T ss_dssp CCCCSSCCCCCCCCCCSCCSEEEEEEEEEEEEEECSS------------------------------------------S
T ss_pred CcccceECCceEeecCCCcCeEEEEEEEEEEEEEccc------------------------------------------C
Confidence 8999999999999999999999999999999999752 3
Q ss_pred cceeeeccceeeeeecCCCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEEEeeecCCCCC
Q psy11674 93 KEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVV 160 (161)
Q Consensus 93 ~~WkerGvG~lkil~~~~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w~a~D~sd~~~ 160 (161)
++|+|||+|.|||++|++++++|||||+|+++||||||+|+++|+++++.+++++|+|++.||+|+++
T Consensus 39 ~~WkerG~G~lkil~~k~~~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~~~ 106 (134)
T 1rrp_B 39 KEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELP 106 (134)
T ss_dssp SCEEEEEEEEEEEEEESSSCCCEEEEECTTTCCEEECCBCCSSCCCBCSTTCTTEEEEEEEECTTSSC
T ss_pred CCcccCcEEEEEEEEECCCCeEEEEEEEcCCCcEEEEeEecCCceEeecCCCCeEEEEEcccccCCCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999875
No 4
>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*
Probab=100.00 E-value=3.7e-41 Score=270.46 Aligned_cols=117 Identities=48% Similarity=0.856 Sum_probs=102.8
Q ss_pred CcCCCCCCCCCccccccCCCccccccccccceeeeeeeceeeeeeccceeeecccceeeecccCCCccccCCCcceeeEE
Q psy11674 3 TTANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVTTGEENETVLFE 82 (161)
Q Consensus 3 ~~~~~~~~~~~f~pv~~l~~~v~v~tgEE~E~~~f~~r~kl~~~~~~~wkerGvg~~kl~~~~~t~~i~tGEE~E~~lf~ 82 (161)
+.++++++++||+|||+|| +++|+||||+|+++|+.|||||+|+...
T Consensus 16 ~~~~~~~~~~~f~Piv~L~-~vev~TGEEdEe~lf~~RaKLf~f~~d~-------------------------------- 62 (201)
T 1k5d_B 16 ENTDESNHDPQFEPIVSLP-EQEIKTLEEDEEELFKMRAKLFRFASEN-------------------------------- 62 (201)
T ss_dssp ------CCCCCCCCSCCCC-CCCCCCSCSSCCCSEEEEEEEEEECCTT--------------------------------
T ss_pred ccccccCCCCccccccccc-cccccCCCccceEEEEEeeeEEEecccc--------------------------------
Confidence 4567889999999999999 5799999999999999999999995310
Q ss_pred eeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEEEe-eecCCCCC
Q psy11674 83 QRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFA-QDYADEVV 160 (161)
Q Consensus 83 ~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w~a-~D~sd~~~ 160 (161)
.+++|++||+|.||||+|++++++|||||+|+++||||||+|+++|+++++.+++++|+|++ .||+||++
T Consensus 63 --------~~~~WKERGvG~lkIlk~k~t~k~RlvMR~d~~~kV~LN~~I~~~m~~~~~~~s~ks~v~~~~~d~ad~~~ 133 (201)
T 1k5d_B 63 --------DLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECP 133 (201)
T ss_dssp --------SSCCEEEEEEEEEEEEECSSSCCEEEEEEETTTCCEEEEEECCSSCCCCBCSSCSSEEEEEEEEECTTSSC
T ss_pred --------cCCCccccceEEEEEEEcCCCCcEEEEEEECCcceEEEeeEecCCceeeecCCCCceEEEEeccccCCCCC
Confidence 04689999999999999999999999999999999999999999999999999999999998 99999875
No 5
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=100.00 E-value=5.4e-35 Score=220.18 Aligned_cols=90 Identities=50% Similarity=0.985 Sum_probs=86.6
Q ss_pred ccCCCcceeeEEeeeeEeeeec--cceeeeccceeeeeecCCCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEE
Q psy11674 71 TTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAY 148 (161)
Q Consensus 71 ~tGEE~E~~lf~~raKL~~~~~--~~WkerGvG~lkil~~~~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~ 148 (161)
.||||||+++|+.|||||+|++ ++|+|||+|.|||++|++++++|||||+|+++||||||+|+++|+++++.+++++|
T Consensus 1 gtGEE~E~~l~~~raKL~~~~~~~~~WkERG~G~lkil~~k~~~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~ 80 (130)
T 1xke_A 1 GSGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAW 80 (130)
T ss_dssp CCSSSCEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTSSCEEEEEEETTTTEEEEEEECCTTSCEEECTTCSSCE
T ss_pred CCCCcceEEEEEEEEEEEEEcCCCCCcccCcEEEEEEEEcCCCCeEEEEEEEcCCCeEEEecEeCCCcEEeecCCCCeEE
Confidence 3899999999999999999974 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeecCCCCC
Q psy11674 149 IWFAQDYADEVV 160 (161)
Q Consensus 149 ~w~a~D~sd~~~ 160 (161)
+|++.||+|+++
T Consensus 81 ~~~~~d~~d~~~ 92 (130)
T 1xke_A 81 MWLASDFSDGDA 92 (130)
T ss_dssp EEEEEECSSSCS
T ss_pred EEEecccCCCCC
Confidence 999999999875
No 6
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=100.00 E-value=3.3e-34 Score=220.79 Aligned_cols=102 Identities=29% Similarity=0.390 Sum_probs=90.6
Q ss_pred cccccCCCccccccccccceeeeeeeceeeeeeccceeeecccceeeecccCCCccccCCCcceeeEEeeeeEeeeeccc
Q psy11674 15 KPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVTTGEENETVLFEQRAKLYRFVDKE 94 (161)
Q Consensus 15 ~pv~~l~~~v~v~tgEE~E~~~f~~r~kl~~~~~~~wkerGvg~~kl~~~~~t~~i~tGEE~E~~lf~~raKL~~~~~~~ 94 (161)
.|..++|++|+|+||||+|+++|+.|||||+|++. +++
T Consensus 8 ~~~~~~l~~vev~tGEE~E~~l~~~raKL~~fd~~------------------------------------------~~~ 45 (150)
T 2crf_A 8 TARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKT------------------------------------------SQS 45 (150)
T ss_dssp SSCCSCSSCTTTSCCCCCCEEEEEEEEEEEEEETT------------------------------------------TTE
T ss_pred CccccCcccccccCCCcCeEEEEEEEeEEEEEcCC------------------------------------------CCC
Confidence 46667777999999999999999999999999753 367
Q ss_pred eeeeccceeeeeecC----CCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEEEeeecCCCCC
Q psy11674 95 WKERGVGQLKLLKNK----DTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVV 160 (161)
Q Consensus 95 WkerGvG~lkil~~~----~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w~a~D~sd~~~ 160 (161)
|+|||+|+||||+++ .++++|||||+|+++||||||+|+++|++++ .++++|+|+|.|++|+.|
T Consensus 46 WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~--~~~k~~~~~~~d~~d~~~ 113 (150)
T 2crf_A 46 WVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDK--ASEKSIHITAMDTEDQGV 113 (150)
T ss_dssp EEEEEEEEEEEEEEECSSSCSEEEEEEEEESSSCCEEEEEECCTTCCEEC--CSSSEEEEEEEBSSSCCE
T ss_pred cccceeEEEEEEeccccCCCCccEEEEEEEcCcceEEeeeeccCCceeec--CCCCEEEEEeecCCCCce
Confidence 889999999999886 3578999999999999999999999999984 578999999999999875
No 7
>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A
Probab=100.00 E-value=8.3e-34 Score=215.84 Aligned_cols=95 Identities=28% Similarity=0.392 Sum_probs=72.4
Q ss_pred ccccccccccceeeeeeeceeeeeeccceeeecccceeeecccCCCccccCCCcceeeEEeeeeEeeeeccceeeeccce
Q psy11674 23 EVPVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQ 102 (161)
Q Consensus 23 ~v~v~tgEE~E~~~f~~r~kl~~~~~~~wkerGvg~~kl~~~~~t~~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~ 102 (161)
+|+|+||||+|+++|+.|||||+|++. +++|+|||+|.
T Consensus 4 ~v~v~tGEE~E~~~~~~raKL~~f~~~------------------------------------------~~~WkERG~G~ 41 (138)
T 2y8g_A 4 KVEVITGEEAESNVLQMQCKLFVFDKT------------------------------------------SQSWVAVGRGL 41 (138)
T ss_dssp ----------CEEEEEEEEEEEEEETT------------------------------------------TTEEEEEEEEE
T ss_pred cccccCCCcCcEEEEEEEeEEEEEecC------------------------------------------CCCchhceEEE
Confidence 688888888888888888888888752 36788999999
Q ss_pred eeeeecCC----CCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEEEeeecCCCCCC
Q psy11674 103 LKLLKNKD----TGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVS 161 (161)
Q Consensus 103 lkil~~~~----t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w~a~D~sd~~~~ 161 (161)
|||++|+. ++++|||||+|+++||||||+|+|+|++++. ++++|+|+|.|++|++|.
T Consensus 42 lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~--~~k~~~~~~~d~~d~~~~ 102 (138)
T 2y8g_A 42 LRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKA--SEKSIRITAMDTEDQGVK 102 (138)
T ss_dssp EEEEEEECTTTCCEEEEEEEEETTTCCEEEEEECCTTCCEEEE--ETTEEEEECCC--CCCCC
T ss_pred EEEEEeccCCCCCccEEEEEEEcCcceEEEeeEecCCceeecC--CCCEEEEEEecCCCCceE
Confidence 99999873 4789999999999999999999999999864 689999999999998763
No 8
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=99.97 E-value=9.4e-33 Score=208.24 Aligned_cols=94 Identities=36% Similarity=0.581 Sum_probs=70.8
Q ss_pred cccccccccceeeeeeeceeeeeeccceeeecccceeeecccCCCccccCCCcceeeEEeeeeEeeeeccceeeecccee
Q psy11674 24 VPVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQL 103 (161)
Q Consensus 24 v~v~tgEE~E~~~f~~r~kl~~~~~~~wkerGvg~~kl~~~~~t~~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~l 103 (161)
|+|+||||||+++|+.|||||+|++. +++|+|||+|+|
T Consensus 1 iev~tGEE~E~~lf~~raKL~~f~~~------------------------------------------~~~WkerG~G~l 38 (130)
T 3n7c_A 1 MSLTNGEENEEVLFCEKAKLLIFDSD------------------------------------------TKGYTSRGVGEL 38 (130)
T ss_dssp ---------CEEEEEEEEEEEEECC---------------------------------------------CEEEEEEEEE
T ss_pred CcccCCCcCeeEEEEEEEEEEEEeCC------------------------------------------CCCchhcceEEE
Confidence 45667777777777777777777542 358999999999
Q ss_pred eeeecCC-CCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEEEeeecCCCCC
Q psy11674 104 KLLKNKD-TGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVV 160 (161)
Q Consensus 104 kil~~~~-t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w~a~D~sd~~~ 160 (161)
|||++++ ++++|||||+|+++|||||++|+|+|+++++.+++++|+|++. ++||.|
T Consensus 39 kil~~k~~~~k~RllmR~d~~~kv~lN~~i~~~m~~~~~~~~~~~~v~~~~-~~dgk~ 95 (130)
T 3n7c_A 39 KLLRKKDDKGKVRVLCRSEGMGHVLLNTSVVKSFKYQPIDADNENLIKWPI-ITDGKL 95 (130)
T ss_dssp EEEEETTEEEEEEEEEEC-CCCCEEEEEECCTTBCCEESCTTCTTEEEEEE-EETTEE
T ss_pred EEEEecCCCCEEEEEEEecCCceEEeeccccCCcEEeEcCCCCccEEEEEe-cCCCce
Confidence 9999995 8899999999999999999999999999999998999999873 478765
No 9
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=5.7e-31 Score=197.20 Aligned_cols=89 Identities=25% Similarity=0.368 Sum_probs=78.1
Q ss_pred ccccCCCcceeeEEeeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEeCCe-eeEEEcccccCCcEEeecCCCCcE
Q psy11674 69 KVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRDIV-HKICANHFLHQDMELKPMPNTKQA 147 (161)
Q Consensus 69 ~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~d~~-~kv~lN~~I~~~m~~~~~~~~~~a 147 (161)
...||||+|+++|+.|||||++.+++|+|||+|+|||++++ ++++|||||+|++ +||||||+|+++|+++++ ++++.
T Consensus 4 ~~~tgEE~E~~lf~~raKLf~~~~~~WkERGvG~lki~~~k-~~k~RllmR~d~~~~kv~lN~~i~~~m~~~~~-g~~~~ 81 (125)
T 2ec1_A 4 GSSGEVKEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTA-NQKTQLLVRADTNLGNILLNVLIPPNMPCTRT-GKNNV 81 (125)
T ss_dssp ----CCCCCSCSEEEEEEEEEECSSSEEEEEEEEEEEEECS-SSSEEEEEEESSSSCCBSCCEECCSSCCEECC-TTTEE
T ss_pred CCcCCccCceeEEEEeeEEEEecCCCcccccEEEEEeeecC-CCcEEEEEEecCCCCEEEEeeEEcCCCeEEec-CCCcE
Confidence 45789999999999999999999999999999999999886 7899999999986 799999999999999998 67889
Q ss_pred EEEEe-eecCCCC
Q psy11674 148 YIWFA-QDYADEV 159 (161)
Q Consensus 148 ~~w~a-~D~sd~~ 159 (161)
|+|+. .+|+||.
T Consensus 82 ~~~~~~~~~~d~~ 94 (125)
T 2ec1_A 82 LIVCVPNPPIDEK 94 (125)
T ss_dssp EEEECCSSCSCSS
T ss_pred EEEEccCCcccCC
Confidence 99975 4456886
No 10
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=99.48 E-value=2e-14 Score=107.72 Aligned_cols=45 Identities=56% Similarity=1.003 Sum_probs=40.0
Q ss_pred ccccccceeeeeeeceeeeeec--cceeeecccceeeecccCCCccc
Q psy11674 27 TTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVT 71 (161)
Q Consensus 27 ~tgEE~E~~~f~~r~kl~~~~~--~~wkerGvg~~kl~~~~~t~~i~ 71 (161)
.||||||+++|+.|||||+|++ ++|+|||+|.+||+++++++.++
T Consensus 1 gtGEE~E~~l~~~raKL~~~~~~~~~WkERG~G~lkil~~k~~~k~R 47 (130)
T 1xke_A 1 GSGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLR 47 (130)
T ss_dssp CCSSSCEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTSSCEE
T ss_pred CCCCcceEEEEEEEEEEEEEcCCCCCcccCcEEEEEEEEcCCCCeEE
Confidence 3899999999999999999986 78999999999999998655443
No 11
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=7.5e-14 Score=104.10 Aligned_cols=41 Identities=27% Similarity=0.512 Sum_probs=35.5
Q ss_pred ccccccccceeeeeeeceeeeeeccceeeecccceeeeccc
Q psy11674 25 PVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNK 65 (161)
Q Consensus 25 ~v~tgEE~E~~~f~~r~kl~~~~~~~wkerGvg~~kl~~~~ 65 (161)
...||||||+++|+.|||||+|++++|||||+|.+||++.+
T Consensus 4 ~~~tgEE~E~~lf~~raKLf~~~~~~WkERGvG~lki~~~k 44 (125)
T 2ec1_A 4 GSSGEVKEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTA 44 (125)
T ss_dssp ----CCCCCSCSEEEEEEEEEECSSSEEEEEEEEEEEEECS
T ss_pred CCcCCccCceeEEEEeeEEEEecCCCcccccEEEEEeeecC
Confidence 46899999999999999999999999999999999998764
No 12
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=99.18 E-value=9.3e-11 Score=87.67 Aligned_cols=75 Identities=16% Similarity=0.295 Sum_probs=65.7
Q ss_pred cceeeEEeeeeEeeeec--cceeeeccc-----eeeeeecCCCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEE
Q psy11674 76 NETVLFEQRAKLYRFVD--KEWKERGVG-----QLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAY 148 (161)
Q Consensus 76 ~E~~lf~~raKL~~~~~--~~WkerGvG-----~lkil~~~~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~ 148 (161)
.|.+|+++||+||.+++ +.|..+|.| .++|+++..+..+||++|+.+..++|+|+.|.++|.+.+ .++..+
T Consensus 2 ~E~~i~~~~A~V~~~d~~~~~W~~~g~G~~~l~~V~i~~~~~~~~~Riv~~~~~~~~vi~n~~i~~~~~y~~--~~~~Fh 79 (130)
T 1qc6_A 2 SEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASSTFRVVGVKLQDQQVVINYSIVKGLKYNQ--ATPTFH 79 (130)
T ss_dssp CCEEEEEEEEEEEEEETTTTEEEECC-----CEEEEEEEETTTTEEEEEEECTTTCCEEEEEECCTTCEEEE--EETTEE
T ss_pred CceeEEEEEEEEEEECCCCCceeECCCCceeeeEEEEEecCCCcEEEEEEEeCCCCeEEEeeEEeCCcEEec--cCCeeE
Confidence 37899999999999974 689999998 788999988889999999988899999999999999987 578899
Q ss_pred EEEe
Q psy11674 149 IWFA 152 (161)
Q Consensus 149 ~w~a 152 (161)
.|..
T Consensus 80 ~w~~ 83 (130)
T 1qc6_A 80 QWRD 83 (130)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9974
No 13
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=98.70 E-value=6.8e-08 Score=71.37 Aligned_cols=73 Identities=15% Similarity=0.307 Sum_probs=62.2
Q ss_pred cceeeEEeeeeEeeeec---cceeeeccceee--eeecCCCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEE
Q psy11674 76 NETVLFEQRAKLYRFVD---KEWKERGVGQLK--LLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIW 150 (161)
Q Consensus 76 ~E~~lf~~raKL~~~~~---~~WkerGvG~lk--il~~~~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w 150 (161)
.|..||..||.+|.+++ +.|...|.|..+ |.++...+.+||+.+++ .++++|+.|.++|.+.+ .++....|
T Consensus 2 ~E~~i~~~rA~V~~~D~~tk~~W~p~g~~~~~V~~~~d~~~~~yRIv~~~~--~~vv~n~~i~~~l~y~~--a~p~FhqW 77 (120)
T 1ddw_A 2 GEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDG--SKAIINSTITPNMTFTK--TSQKFGQW 77 (120)
T ss_dssp CEEEEEEEEEEEEEECTTTSCSEEESCSSCEEEEEEEETTTTEEEEEEEET--TEEEEEEECCTTCCCEE--CSSSEEEE
T ss_pred CceEEEEEEEEEEEEcCCCCCceEeCCCCceEEEEEEcCCCCEEEEEEccC--CEEEEeCEecCCcEEee--CCccccEE
Confidence 37889999999999975 499996655555 77888888899999984 69999999999999987 58889999
Q ss_pred Ee
Q psy11674 151 FA 152 (161)
Q Consensus 151 ~a 152 (161)
..
T Consensus 78 ~d 79 (120)
T 1ddw_A 78 AD 79 (120)
T ss_dssp EE
T ss_pred Ec
Confidence 85
No 14
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=98.54 E-value=2.3e-07 Score=72.25 Aligned_cols=74 Identities=15% Similarity=0.304 Sum_probs=62.7
Q ss_pred cceeeEEeeeeEeeeec---cceeeeccceee--eeecCCCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEE
Q psy11674 76 NETVLFEQRAKLYRFVD---KEWKERGVGQLK--LLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIW 150 (161)
Q Consensus 76 ~E~~lf~~raKL~~~~~---~~WkerGvG~lk--il~~~~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w 150 (161)
.|..||..||.+|.+++ +.|...|.|.++ |.++...+.+||+.+++ .++++|..|.++|++.+ .++..+.|
T Consensus 7 ~E~~I~s~rA~Vm~~D~~tk~~WvP~g~~~~~V~i~~d~~rnsyRIvg~~d--~kvvinc~I~~~l~Y~k--asp~FHqW 82 (168)
T 1i2h_A 7 GEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDG--SKAIINSTITPNMTFTK--TSQKFGQW 82 (168)
T ss_dssp SSCCSEEEEEEEEEECTTSSCCSEESCSSCEEEEEEEETTTTEEEEEEEET--TEEEEEEECCTTCCEEE--EETTEEEE
T ss_pred cceeEEEEEEEEEEECCCCCCceeecCCCCeEEEEEEcCCCCEEEEEEccC--CEEEEecEecCCcEEee--CCccccee
Confidence 57889999999999975 389996666665 77888778899999985 69999999999999987 47889999
Q ss_pred Eee
Q psy11674 151 FAQ 153 (161)
Q Consensus 151 ~a~ 153 (161)
...
T Consensus 83 ~d~ 85 (168)
T 1i2h_A 83 ADS 85 (168)
T ss_dssp EET
T ss_pred ecC
Confidence 863
No 15
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=98.22 E-value=1.3e-06 Score=65.22 Aligned_cols=61 Identities=34% Similarity=0.498 Sum_probs=45.1
Q ss_pred eeecccCCCccccCCCcceeeEEeeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEe-CCeeeEEEc
Q psy11674 60 KLLKNKDTGKVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRR-DIVHKICAN 129 (161)
Q Consensus 60 kl~~~~~t~~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~-d~~~kv~lN 129 (161)
.|+..++..++.||||+|+++|+.|||||+| ++. . +-++.+..|..||+-.. .+..||++=
T Consensus 4 pi~~l~~~vev~tGEE~E~~lf~~raKL~~~-~~~-----~---~~WkerG~G~lkil~~k~~~k~RlvmR 65 (134)
T 1rrp_B 4 PVVPLPDKIEVKTGEEDEEEFFCNRAKLFRF-DVE-----S---KEWKERGIGNVKILRHKTSGKIRLLMR 65 (134)
T ss_dssp CSSCCCCCCCCCCSCCSEEEEEEEEEEEEEE-CSS-----S---SCEEEEEEEEEEEEEESSSCCCEEEEE
T ss_pred cceECCceEeecCCCcCeEEEEEEEEEEEEE-ccc-----C---CCcccCcEEEEEEEEECCCCeEEEEEE
Confidence 4555666789999999999999999999999 331 1 23556667889988764 445666653
No 16
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=98.12 E-value=1.6e-06 Score=64.72 Aligned_cols=52 Identities=37% Similarity=0.572 Sum_probs=31.3
Q ss_pred ccccCCCcceeeEEeeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEeC--CeeeEEEc
Q psy11674 69 KVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRD--IVHKICAN 129 (161)
Q Consensus 69 ~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~d--~~~kv~lN 129 (161)
++.||||||+++|+.|||||+| ++ +. +-++.+..|..||+-..+ +..||++=
T Consensus 2 ev~tGEE~E~~lf~~raKL~~f-~~-----~~---~~WkerG~G~lkil~~k~~~~k~RllmR 55 (130)
T 3n7c_A 2 SLTNGEENEEVLFCEKAKLLIF-DS-----DT---KGYTSRGVGELKLLRKKDDKGKVRVLCR 55 (130)
T ss_dssp --------CEEEEEEEEEEEEE-CC-----------CEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cccCCCcCeeEEEEEEEEEEEE-eC-----CC---CCchhcceEEEEEEEecCCCCEEEEEEE
Confidence 5789999999999999999999 33 22 345566778999998764 35566643
No 17
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=98.11 E-value=2.3e-06 Score=64.67 Aligned_cols=59 Identities=34% Similarity=0.525 Sum_probs=34.5
Q ss_pred eecccCCCccccCCCcceeeEEeeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEeC-CeeeEEEc
Q psy11674 61 LLKNKDTGKVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRD-IVHKICAN 129 (161)
Q Consensus 61 l~~~~~t~~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~d-~~~kv~lN 129 (161)
+++. +.+++.||||||+++|+.|||||+| + .+. .-++.+..|..||+-..+ +..||++=
T Consensus 7 vv~l-~~vev~tGEE~E~~lf~~raKLf~f-~-----~~~---~~WkerG~G~lkilk~k~~~k~RllmR 66 (140)
T 4hat_B 7 VVHL-EKVDVKTMEEDEEVLYKVRAKLFRF-D-----KDA---KEWKERGTGDCKFLKNKKTNKVRILMR 66 (140)
T ss_dssp -------------CTTEEEEEEEEEEEEEE-E-----TTT---TEEEEEEEEEEEEEEETTTCCEEEEEE
T ss_pred eeEc-ceecccCCCcCeeEEEEEeEEEEEE-c-----CCC---CCcccccEEEEEEEEcCCCCeEEEEEE
Confidence 3344 5678999999999999999999999 2 222 235566778899988754 45566643
No 18
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=98.09 E-value=1.6e-05 Score=57.76 Aligned_cols=74 Identities=19% Similarity=0.377 Sum_probs=62.0
Q ss_pred ceeeEEeeeeEeeeec--cceeeec--cce--eeeeecCCCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEE
Q psy11674 77 ETVLFEQRAKLYRFVD--KEWKERG--VGQ--LKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIW 150 (161)
Q Consensus 77 E~~lf~~raKL~~~~~--~~WkerG--vG~--lkil~~~~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w 150 (161)
|..++++||.+|.+++ +.|...| .|- +.|.++...+.+||+.++-+..++++|+.|.++|.+.. .++..-.|
T Consensus 3 e~~i~~~~A~V~~~d~~~~~W~p~~~~~g~s~V~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~--~~p~Fh~w 80 (112)
T 1evh_A 3 EQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQ--ATQTFHQW 80 (112)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEGGGCCSCEEEEEEEETTTTEEEEEEEETTTCCEEEEEEECTTCCCBC--CSSSEEEE
T ss_pred ceeEEEEEEEEEEEcCCCCceEECCCCCCceEEEEEEECCCCEEEEEEEECCCCcEEEeeEecCCceEEe--cCccceeE
Confidence 7789999999999974 6899888 344 88888877788999999866789999999999999875 46677778
Q ss_pred Ee
Q psy11674 151 FA 152 (161)
Q Consensus 151 ~a 152 (161)
..
T Consensus 81 ~~ 82 (112)
T 1evh_A 81 RD 82 (112)
T ss_dssp EC
T ss_pred ec
Confidence 74
No 19
>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*
Probab=98.05 E-value=3.9e-06 Score=66.94 Aligned_cols=61 Identities=31% Similarity=0.499 Sum_probs=44.4
Q ss_pred eeecccCCCccccCCCcceeeEEeeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEe-CCeeeEEE
Q psy11674 60 KLLKNKDTGKVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRR-DIVHKICA 128 (161)
Q Consensus 60 kl~~~~~t~~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~-d~~~kv~l 128 (161)
.++..++ .++.||||+|+++|+.|||||+|.+.. .-+-++.+..|.+||+... .+..||++
T Consensus 29 Piv~L~~-vev~TGEEdEe~lf~~RaKLf~f~~d~-------~~~~WKERGvG~lkIlk~k~t~k~RlvM 90 (201)
T 1k5d_B 29 PIVSLPE-QEIKTLEEDEEELFKMRAKLFRFASEN-------DLPEWKERGTGDVKLLKHKEKGAIRLLM 90 (201)
T ss_dssp CSCCCCC-CCCCCSCSSCCCSEEEEEEEEEECCTT-------SSCCEEEEEEEEEEEEECSSSCCEEEEE
T ss_pred ccccccc-ccccCCCccceEEEEEeeeEEEecccc-------cCCCccccceEEEEEEEcCCCCcEEEEE
Confidence 3443333 489999999999999999999997531 1233566677889998774 45667776
No 20
>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}
Probab=98.04 E-value=3.8e-06 Score=66.56 Aligned_cols=68 Identities=29% Similarity=0.423 Sum_probs=42.3
Q ss_pred eeecccceeeecccCCCccccCCCcceeeEEeeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEeC-CeeeEEEc
Q psy11674 52 KERGVGQLKLLKNKDTGKVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRD-IVHKICAN 129 (161)
Q Consensus 52 kerGvg~~kl~~~~~t~~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~d-~~~kv~lN 129 (161)
.+.++..-.++.. +.+++.||||+|+++|+.|||||+| ++ .. .-++.+..|.+||+-..+ +..||++-
T Consensus 49 e~~~~~f~Pvv~L-~~vev~tGEEdEe~lf~~RaKLf~f-~~-----~~---~~WKERGvG~lkilk~ket~k~RllMR 117 (191)
T 3m1i_B 49 ESPDIHFEPVVHL-EKVDVKTMEEDEEVLYKVRAKLFRF-DA-----DA---KEWKERGTGDCKFLKNKKTNKVRILMR 117 (191)
T ss_dssp ------------C-CCCCCCCSCTTEEEEEEEEEEEEEE-ET-----TT---TEEEEEEEEEEEEEEETTTCCEEEEEE
T ss_pred cCCCCCcccceec-ccccccCCCcceeeeeEEeeEEEEE-ec-----CC---CCccceeEEEEEEEEcCCCCeEEEEEE
Confidence 3455555566666 6689999999999999999999999 22 22 235566778899988764 45566643
No 21
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=98.04 E-value=1.5e-05 Score=58.23 Aligned_cols=74 Identities=20% Similarity=0.369 Sum_probs=62.7
Q ss_pred ceeeEEeeeeEeeeec--cceeeecc---c--eeeeeecCCCCcEEEEEEeCC-eeeEEEcccccCCcEEeecCCCCcEE
Q psy11674 77 ETVLFEQRAKLYRFVD--KEWKERGV---G--QLKLLKNKDTGKVRLLMRRDI-VHKICANHFLHQDMELKPMPNTKQAY 148 (161)
Q Consensus 77 E~~lf~~raKL~~~~~--~~WkerGv---G--~lkil~~~~t~~~RilmR~d~-~~kv~lN~~I~~~m~~~~~~~~~~a~ 148 (161)
|..++++||.+|.+++ +.|...|. | .+.|.++...+.+||+.+.-+ ..++++|+.|.++|.+.. .++..-
T Consensus 3 e~~i~~~~A~V~~~d~~~~~W~p~~~g~~gvs~V~~~~d~~~~~yrI~~~~l~~~~~vv~~~~l~~~l~y~~--~~p~FH 80 (115)
T 1egx_A 3 ETVICSSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRKMQPDQQVVINCAIVRGVKYNQ--ATPNFH 80 (115)
T ss_dssp SCEEEEEEEECBEECTTTSSCCBSSCSCCCCEEEEEEEETTTTEEEEEEEESSTTCCEEEEEEECSSCCCCC--SSTTEE
T ss_pred ceeEEEEEEEEEEEcCCCCceeECCCCCCCccEEEEEEeCCCCEEEEEEEEcCCCCEEEEeeEEcCCceEEe--cCccce
Confidence 6789999999999974 56998886 4 488999888889999999866 789999999999999875 467777
Q ss_pred EEEe
Q psy11674 149 IWFA 152 (161)
Q Consensus 149 ~w~a 152 (161)
.|..
T Consensus 81 ~w~~ 84 (115)
T 1egx_A 81 QWRD 84 (115)
T ss_dssp EEES
T ss_pred EEec
Confidence 7874
No 22
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=98.02 E-value=6.3e-06 Score=62.79 Aligned_cols=55 Identities=27% Similarity=0.411 Sum_probs=41.1
Q ss_pred cCCCccccCCCcceeeEEeeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEe---C--CeeeEEE
Q psy11674 65 KDTGKVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRR---D--IVHKICA 128 (161)
Q Consensus 65 ~~t~~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~---d--~~~kv~l 128 (161)
.+.+++.||||+|+++|++|||||+| ++ .. +-++.+..|..||+... + +..||++
T Consensus 14 l~~vev~tGEE~E~~l~~~raKL~~f-d~-----~~---~~WkERG~G~lkil~~k~~~~~t~k~Rlvm 73 (150)
T 2crf_A 14 LEKVEVITGEEAESNVLQMQCKLFVF-DK-----TS---QSWVERGRGLLRLNDMASTDDGTLQSRLVM 73 (150)
T ss_dssp SSCTTTSCCCCCCEEEEEEEEEEEEE-ET-----TT---TEEEEEEEEEEEEEEEECSSSCSEEEEEEE
T ss_pred cccccccCCCcCeEEEEEEEeEEEEE-cC-----CC---CCcccceeEEEEEEeccccCCCCccEEEEE
Confidence 34578999999999999999999999 33 22 23556677889999876 2 2456664
No 23
>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A
Probab=97.97 E-value=4.4e-06 Score=62.83 Aligned_cols=53 Identities=26% Similarity=0.363 Sum_probs=32.1
Q ss_pred CccccCCCcceeeEEeeeeEeeeeccceeeeccceeeeeecCCCCcEEEEEEeC-----CeeeEEEc
Q psy11674 68 GKVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRD-----IVHKICAN 129 (161)
Q Consensus 68 ~~i~tGEE~E~~lf~~raKL~~~~~~~WkerGvG~lkil~~~~t~~~RilmR~d-----~~~kv~lN 129 (161)
+++.||||+|+++|++|||||+| ++ .. +-++.+..|..||+.... +..||++=
T Consensus 5 v~v~tGEE~E~~~~~~raKL~~f-~~-----~~---~~WkERG~G~lkil~~k~~~~~t~k~RlvmR 62 (138)
T 2y8g_A 5 VEVITGEEAESNVLQMQCKLFVF-DK-----TS---QSWVAVGRGLLRLNDMASTDDGTLQSRLVMR 62 (138)
T ss_dssp ---------CEEEEEEEEEEEEE-ET-----TT---TEEEEEEEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred ccccCCCcCcEEEEEEEeEEEEE-ec-----CC---CCchhceEEEEEEEEeccCCCCCccEEEEEE
Confidence 57899999999999999999999 32 22 235566778999999862 34566653
No 24
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=97.67 E-value=0.00012 Score=53.72 Aligned_cols=75 Identities=17% Similarity=0.175 Sum_probs=55.6
Q ss_pred cceeeEEeeeeEeeeec--cceeeecccee---eeeecC-----CCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCC
Q psy11674 76 NETVLFEQRAKLYRFVD--KEWKERGVGQL---KLLKNK-----DTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTK 145 (161)
Q Consensus 76 ~E~~lf~~raKL~~~~~--~~WkerGvG~l---kil~~~-----~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~ 145 (161)
.|..++++||.+|.+++ +.|...|.|-| .|..++ ..+.+||+.++-+..++++|+.|.++|.+... ++
T Consensus 2 ~~~~i~~~~A~V~~~d~~~~~W~p~~~g~ls~v~i~~~~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~--~p 79 (118)
T 1xod_A 2 SDDSYARVRAVVMTRDDSSGGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLRRDLVYNKV--TP 79 (118)
T ss_dssp ---CCEEEEEEEEEECSSSSCEEEGGGCCCEEEEEECC---------CCEEEEEETTTCCEEEEEECCTTCEEEEE--ET
T ss_pred CCccEEEEEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCcCCCCCCEEEEEEEECCCCeEEEEEEEeCCcEEEec--CC
Confidence 36779999999999974 78999887764 455443 34579999998667899999999999998864 66
Q ss_pred cEEEEEe
Q psy11674 146 QAYIWFA 152 (161)
Q Consensus 146 ~a~~w~a 152 (161)
..-.|..
T Consensus 80 ~Fh~w~~ 86 (118)
T 1xod_A 80 TFHHWRI 86 (118)
T ss_dssp TEEEEEE
T ss_pred cceEEEe
Confidence 6777764
No 25
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.49 E-value=0.00046 Score=51.10 Aligned_cols=76 Identities=11% Similarity=0.170 Sum_probs=59.8
Q ss_pred CcceeeEEeeeeEeeeec--cceeeeccce---eeeeecC-----CCCcEEEEEEeCCeeeEEEcccccCCcEEeecCCC
Q psy11674 75 ENETVLFEQRAKLYRFVD--KEWKERGVGQ---LKLLKNK-----DTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNT 144 (161)
Q Consensus 75 E~E~~lf~~raKL~~~~~--~~WkerGvG~---lkil~~~-----~t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~ 144 (161)
..|..++++||.+|.+++ +.|...|.|- +.|...+ ....+||+.++-+..++++|+.|.++|++... +
T Consensus 10 ~~~~~i~~~~A~Vm~~D~~~~~W~p~~~g~ls~v~v~~~~~~~d~~~~~yrI~~~~l~d~~vv~~~~l~~~l~Y~~~--~ 87 (126)
T 2jp2_A 10 DDDSYIVRVKAVVMTRDDSSGGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTKA--N 87 (126)
T ss_dssp SCCSEEEEEEEEEEEECTTSSSSEECSCCSCEEEEEECCBCTTCSSCBCEEEEEEESSSSCEEEEEEESSCCCEEEE--E
T ss_pred CCcceEEEEEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCCCCCCCCEEEEEEEEcCCCeEEEEEEEeCCceEEec--C
Confidence 367889999999999974 6899988776 3444443 34579999998667899999999999999864 5
Q ss_pred CcEEEEEe
Q psy11674 145 KQAYIWFA 152 (161)
Q Consensus 145 ~~a~~w~a 152 (161)
+..-.|..
T Consensus 88 p~FH~w~~ 95 (126)
T 2jp2_A 88 PTFHHWKV 95 (126)
T ss_dssp TTEEEEEC
T ss_pred CcceEEEc
Confidence 66777764
No 26
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=96.13 E-value=0.025 Score=42.08 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=52.3
Q ss_pred eeEEeeeeEeeeec--cceeeeccc---eeeeeecCC-----CCcEEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEE
Q psy11674 79 VLFEQRAKLYRFVD--KEWKERGVG---QLKLLKNKD-----TGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAY 148 (161)
Q Consensus 79 ~lf~~raKL~~~~~--~~WkerGvG---~lkil~~~~-----t~~~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~ 148 (161)
..|.+||.+|.+++ +.|..-|-| .+-|.++.. .+.+||+=|+-+-.+|+||..|.++|++... ++..=
T Consensus 12 ~~~~~rA~Vm~~Dd~tk~WlP~gg~glS~v~iy~~~~~~~~~~~~yRIvg~r~~d~~vvinc~I~~~l~Ynka--tp~FH 89 (130)
T 3syx_A 12 SYARVRAVVMTRDDSSGGWLPLGGSGLSSVTVFKVPHQEENGCADFFIRGERLRDKMVVLECMLKKDLIYNKV--TPTFH 89 (130)
T ss_dssp EEEEEEEEEEEECSSSSCEEESSSSCCEEEEEEEEESSSTTSSEEEEEEEEETTTCCEEEEEECCTTCEEEEE--ETTEE
T ss_pred eeeEEEEEeeeEcCCCCceEeCCCCCCceEEEEeccCCCCCCCcEEEEEEEecCCCeEEEeeeecCCceEEec--ccccc
Confidence 46899999999985 679876533 445555422 2479999997555689999999999999765 44455
Q ss_pred EEE
Q psy11674 149 IWF 151 (161)
Q Consensus 149 ~w~ 151 (161)
.|.
T Consensus 90 qWr 92 (130)
T 3syx_A 90 HWK 92 (130)
T ss_dssp EEE
T ss_pred ccc
Confidence 565
No 27
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=95.62 E-value=0.0098 Score=43.81 Aligned_cols=26 Identities=27% Similarity=0.493 Sum_probs=22.0
Q ss_pred cceeeeeeeceeeeeec--cceeeeccc
Q psy11674 32 NETVLFEQRAKLYRFVD--KEWKERGVG 57 (161)
Q Consensus 32 ~E~~~f~~r~kl~~~~~--~~wkerGvg 57 (161)
.|.+||+.||+||.+++ +.|..+|.|
T Consensus 2 ~E~~i~~~~A~V~~~d~~~~~W~~~g~G 29 (130)
T 1qc6_A 2 SEQSICQARASVMVYDDTSKKWVPIKPG 29 (130)
T ss_dssp CCEEEEEEEEEEEEEETTTTEEEECC--
T ss_pred CceeEEEEEEEEEEECCCCCceeECCCC
Confidence 48999999999999986 579999988
No 28
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=92.12 E-value=0.13 Score=37.45 Aligned_cols=30 Identities=20% Similarity=0.472 Sum_probs=26.1
Q ss_pred cceeeeeeeceeeeeec---cceeeecccceee
Q psy11674 32 NETVLFEQRAKLYRFVD---KEWKERGVGQLKL 61 (161)
Q Consensus 32 ~E~~~f~~r~kl~~~~~---~~wkerGvg~~kl 61 (161)
.|.+||+.||.+|.+|+ +.|..+|.|..++
T Consensus 2 ~E~~i~~~rA~V~~~D~~tk~~W~p~g~~~~~V 34 (120)
T 1ddw_A 2 GEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTV 34 (120)
T ss_dssp CEEEEEEEEEEEEEECTTTSCSEEESCSSCEEE
T ss_pred CceEEEEEEEEEEEEcCCCCCceEeCCCCceEE
Confidence 48899999999999987 3899988887764
No 29
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=88.94 E-value=0.25 Score=38.11 Aligned_cols=31 Identities=19% Similarity=0.436 Sum_probs=26.5
Q ss_pred ccceeeeeeeceeeeeec--c-ceeeecccceee
Q psy11674 31 ENETVLFEQRAKLYRFVD--K-EWKERGVGQLKL 61 (161)
Q Consensus 31 E~E~~~f~~r~kl~~~~~--~-~wkerGvg~~kl 61 (161)
-.|.+||..||.+|.+|+ + .|...|.|.+++
T Consensus 6 ~~E~~I~s~rA~Vm~~D~~tk~~WvP~g~~~~~V 39 (168)
T 1i2h_A 6 MGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTV 39 (168)
T ss_dssp SSSCCSEEEEEEEEEECTTSSCCSEESCSSCEEE
T ss_pred ccceeEEEEEEEEEEECCCCCCceeecCCCCeEE
Confidence 368999999999999987 3 899988887764
No 30
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=82.07 E-value=12 Score=28.06 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=51.9
Q ss_pred eeEEeeeeEeeeec-cceeeeccceeeeeecCCCCc--EEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEEE
Q psy11674 79 VLFEQRAKLYRFVD-KEWKERGVGQLKLLKNKDTGK--VRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWF 151 (161)
Q Consensus 79 ~lf~~raKL~~~~~-~~WkerGvG~lkil~~~~t~~--~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w~ 151 (161)
++-.+=|.||.-.+ +.|.-.+.|.+-+.+...... .||+=.. ..+++.++-|..+|.+... .+...+|-
T Consensus 42 ~lataVaqLy~a~~~~~W~~~~~Gal~~VkD~~~rsyf~RlvDl~--~~~viweqELY~~f~Y~~~--r~~FHtFe 113 (152)
T 1mke_A 42 TMSSAVVQLYAADRNCMWSKKCSGVACLVKDNPQRSYFLRIFDIK--DGKLLWEQELYNNFVYNSP--RGYFHTFA 113 (152)
T ss_dssp EEEEEEEEEEEEETTTEEEEEEEEEEEEEEETTTTEEEEEEECSS--SCSEEEEEECCSSCCCBCS--SSSEEEEE
T ss_pred EEEEeeEEEEEECCCCceEecCceEEEEEEECCCCeEEEEEEEcc--CCeEEEEeecccceeeccC--CCeEEEEe
Confidence 46666778888864 589999999999988765444 4888775 3589999999999998653 33455554
No 31
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=75.52 E-value=13 Score=27.18 Aligned_cols=58 Identities=16% Similarity=0.311 Sum_probs=42.1
Q ss_pred EeeeeEeeeec--cceeeecc-ceeeeeecCCCCcEEE-EEEeCCeeeEEEcccccCCcEEeec
Q psy11674 82 EQRAKLYRFVD--KEWKERGV-GQLKLLKNKDTGKVRL-LMRRDIVHKICANHFLHQDMELKPM 141 (161)
Q Consensus 82 ~~raKL~~~~~--~~WkerGv-G~lkil~~~~t~~~Ri-lmR~d~~~kv~lN~~I~~~m~~~~~ 141 (161)
..-|.+|.|++ ++|.-.|+ |.|.|.+......+.| ||-|-++..++. .|.+++.++..
T Consensus 35 a~~v~vY~f~~~~~~W~K~~iEG~LFv~~R~~~P~~~~ivLNR~~~~n~~~--~l~~~~~~e~~ 96 (134)
T 2lyd_A 35 SSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNTTSFVE--PITGSLELQSQ 96 (134)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEEEEEECSSSSSEEEEEEETTTTEEEEE--ECCSSCEEEEE
T ss_pred CCeEEEEEecCCcCceeEcCCcceEEEEEccCCCceEEEEEcCCCCcceeE--EcCCCcEEEee
Confidence 34789999974 68965554 8888887666677776 777777676664 47888887764
No 32
>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}
Probab=73.20 E-value=12 Score=28.53 Aligned_cols=69 Identities=14% Similarity=0.169 Sum_probs=52.3
Q ss_pred eeEEeeeeEeeeec-cceeeeccceeeeeecCCCCc--EEEEEEeCCeeeEEEcccccCCcEEeecCCCCcEEEEE
Q psy11674 79 VLFEQRAKLYRFVD-KEWKERGVGQLKLLKNKDTGK--VRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWF 151 (161)
Q Consensus 79 ~lf~~raKL~~~~~-~~WkerGvG~lkil~~~~t~~--~RilmR~d~~~kv~lN~~I~~~m~~~~~~~~~~a~~w~ 151 (161)
++-.+=|.||.-.. +.|.-.+.|.+-+.++..... .||+=..+ .+++.++-|..+|.+... .+...+|-
T Consensus 59 ~lataVaqLy~a~~~~~W~~~~~Gal~~vkD~~~rsyf~RlvDl~~--~~vvweqELY~~f~Y~~~--r~~FHtFe 130 (169)
T 2ifs_A 59 TMSSAVVQLYAADRNCMWSKKCSGVACLVKDNPQRSYFLRIFDIKD--GKLLWEQELYNNFVYNSP--RGYFHTFA 130 (169)
T ss_dssp EEEEEEEEEEEEETTTEEEEEEEEEEEEEEETTTTEEEEEEEETTT--CCCCEEEECCSSCCCBCC--CSSEEEEE
T ss_pred EEEEEEEEEEEECCCCeeEecCceEEEEEEECCCCeEEEEEEEccC--CeEEEEeecccceeeccC--CCeEEEee
Confidence 45666778888864 589999999999988765444 49988864 589999999999998653 34455564
No 33
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=57.59 E-value=26 Score=25.30 Aligned_cols=57 Identities=16% Similarity=0.487 Sum_probs=36.9
Q ss_pred EeeeeEeeee--ccceeeecc-ceeeeeecCCCCcEEE-EEEeCCeeeEEEcccccCCcEEeec
Q psy11674 82 EQRAKLYRFV--DKEWKERGV-GQLKLLKNKDTGKVRL-LMRRDIVHKICANHFLHQDMELKPM 141 (161)
Q Consensus 82 ~~raKL~~~~--~~~WkerGv-G~lkil~~~~t~~~Ri-lmR~d~~~kv~lN~~I~~~m~~~~~ 141 (161)
..-+-+|.|+ .++|.-.|+ |.|.|.+-. ...+.+ ||-|.++..++. .|++++.++..
T Consensus 30 a~~v~vY~f~~~~~~W~K~~iEGtLFv~~R~-~P~~~~iVlNR~~~~n~~~--~i~~~~~~e~~ 90 (127)
T 2qkl_A 30 ASHVAVYQFDVGSQKWLKTSIEGTFFLVKDQ-RARVGYVILNRNSPENLYL--FINHPSNVHLV 90 (127)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEET-TCCEEEEEEESSSSCCEEE--EECSGGGEEEE
T ss_pred CCeEEEEEecCCCCceEEcCcEEEEEEEEcc-CCceEEEEEcCCCCcCeeE--ecCCCceEEEe
Confidence 3478999998 479976665 888887665 666665 677766665553 46677777753
No 34
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=54.87 E-value=16 Score=25.70 Aligned_cols=33 Identities=24% Similarity=0.509 Sum_probs=25.1
Q ss_pred cceeeeeeeceeeeeec--cceeeecc--cc--eeeecc
Q psy11674 32 NETVLFEQRAKLYRFVD--KEWKERGV--GQ--LKLLKN 64 (161)
Q Consensus 32 ~E~~~f~~r~kl~~~~~--~~wkerGv--g~--~kl~~~ 64 (161)
.|.+|++.||.+|.+++ +.|.-.|. |. +-+.++
T Consensus 2 ~e~~i~~~~A~V~~~d~~~~~W~p~~~~~g~s~V~~~~d 40 (112)
T 1evh_A 2 SEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHH 40 (112)
T ss_dssp CEEEEEEEEEEEEEEETTTTEEEEGGGCCSCEEEEEEEE
T ss_pred CceeEEEEEEEEEEEcCCCCceEECCCCCCceEEEEEEE
Confidence 48899999999999987 67988773 44 444444
No 35
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=50.04 E-value=14 Score=26.18 Aligned_cols=33 Identities=30% Similarity=0.565 Sum_probs=25.2
Q ss_pred cceeeeeeeceeeeeec--cceeeecc---cc--eeeecc
Q psy11674 32 NETVLFEQRAKLYRFVD--KEWKERGV---GQ--LKLLKN 64 (161)
Q Consensus 32 ~E~~~f~~r~kl~~~~~--~~wkerGv---g~--~kl~~~ 64 (161)
.|.+|++.||.+|.+++ +.|.-.|. |. +-+.++
T Consensus 2 ~e~~i~~~~A~V~~~d~~~~~W~p~~~g~~gvs~V~~~~d 41 (115)
T 1egx_A 2 SETVICSSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHN 41 (115)
T ss_dssp CSCEEEEEEEECBEECTTTSSCCBSSCSCCCCEEEEEEEE
T ss_pred CceeEEEEEEEEEEEcCCCCceeECCCCCCCccEEEEEEe
Confidence 37889999999999987 56998786 33 555554
No 36
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=37.09 E-value=21 Score=25.34 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=21.4
Q ss_pred cceeeeeeeceeeeeec--cceeeecccce
Q psy11674 32 NETVLFEQRAKLYRFVD--KEWKERGVGQL 59 (161)
Q Consensus 32 ~E~~~f~~r~kl~~~~~--~~wkerGvg~~ 59 (161)
.|..|+..||.+|.+|+ +.|.-.|-|.+
T Consensus 2 ~~~~i~~~~A~V~~~d~~~~~W~p~~~g~l 31 (118)
T 1xod_A 2 SDDSYARVRAVVMTRDDSSGGWLQLGGGGL 31 (118)
T ss_dssp ---CCEEEEEEEEEECSSSSCEEEGGGCCC
T ss_pred CCccEEEEEEEEeeEcCCCCCEeeCCCCCc
Confidence 46789999999999987 68988777654
No 37
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=31.46 E-value=41 Score=24.18 Aligned_cols=29 Identities=14% Similarity=0.318 Sum_probs=24.5
Q ss_pred ccceeeeeeeceeeeeec--cceeeecccce
Q psy11674 31 ENETVLFEQRAKLYRFVD--KEWKERGVGQL 59 (161)
Q Consensus 31 E~E~~~f~~r~kl~~~~~--~~wkerGvg~~ 59 (161)
..|..|+..||.+|.+|+ +.|.-.|.|.+
T Consensus 10 ~~~~~i~~~~A~Vm~~D~~~~~W~p~~~g~l 40 (126)
T 2jp2_A 10 DDDSYIVRVKAVVMTRDDSSGGWFPQEGGGI 40 (126)
T ss_dssp SCCSEEEEEEEEEEEECTTSSSSEECSCCSC
T ss_pred CCcceEEEEEEEEeeEcCCCCCEeeCCCCCc
Confidence 468899999999999987 67988887753
Done!