BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11676
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54889|ALH13_CAEEL Probable delta-1-pyrroline-5-carboxylate synthase OS=Caenorhabditis
elegans GN=alh-13 PE=2 SV=1
Length = 800
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 73/90 (81%)
Query: 10 TAERRRVTSFSDRGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRE 69
T R++ + R LK A+R+VVKLGSAVITREDE GLALGRLASIVEQV+E GR+
Sbjct: 61 TKTRQKHPLINTRNDLKKAQRVVVKLGSAVITREDECGLALGRLASIVEQVSELQQSGRQ 120
Query: 70 CIMVTSGAVAFGKQKLAQELLMSLSMRETL 99
++V+SGAVAFG+QKL QEL+MS+SMR+TL
Sbjct: 121 MLIVSSGAVAFGRQKLRQELVMSMSMRQTL 150
>sp|Q9Z110|P5CS_MOUSE Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus
GN=Aldh18a1 PE=2 SV=2
Length = 795
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 72/92 (78%), Gaps = 4/92 (4%)
Query: 19 FSDRGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAV 78
F+ R +LK+A+R+VVKLGSAV+TR DE GLALGRLASIVEQV+ +GRE ++VTSGAV
Sbjct: 61 FAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSGAV 120
Query: 79 AFGKQKLAQELLMSLSMRETLSPKDHSRSNHF 110
AFGKQ+L E+L+S S+R+ L HS NH
Sbjct: 121 AFGKQRLRHEILLSQSVRQAL----HSGQNHL 148
>sp|Q5R4M8|P5CS_PONAB Delta-1-pyrroline-5-carboxylate synthase OS=Pongo abelii
GN=ALDH18A1 PE=2 SV=1
Length = 795
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 72/93 (77%), Gaps = 4/93 (4%)
Query: 18 SFSDRGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGA 77
SF+ R +LK+A+R+VVKLGSAV+TR DE GLALGRLASIVEQV+ +GRE ++VTSGA
Sbjct: 60 SFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSGA 119
Query: 78 VAFGKQKLAQELLMSLSMRETLSPKDHSRSNHF 110
VAFGKQ+L E+L+S S+R+ L HS N
Sbjct: 120 VAFGKQRLRHEILLSQSVRQAL----HSGQNQL 148
>sp|P54886|P5CS_HUMAN Delta-1-pyrroline-5-carboxylate synthase OS=Homo sapiens
GN=ALDH18A1 PE=1 SV=2
Length = 795
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 72/93 (77%), Gaps = 4/93 (4%)
Query: 18 SFSDRGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGA 77
SF+ R +LK+A+R+VVKLGSAV+TR DE GLALGRLASIVEQV+ +GRE ++VTSGA
Sbjct: 60 SFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSGA 119
Query: 78 VAFGKQKLAQELLMSLSMRETLSPKDHSRSNHF 110
VAFGKQ+L E+L+S S+R+ L HS N
Sbjct: 120 VAFGKQRLRHEILLSQSVRQAL----HSGQNQL 148
>sp|Q96480|P5CS_SOLLC Delta-1-pyrroline-5-carboxylate synthase OS=Solanum lycopersicum
GN=PRO2 PE=2 SV=1
Length = 717
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 20 SDRGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVA 79
S R +K +RL+VK+G+AV+TR D LALGRL ++ EQ+ E + +G E I+VTSGAV
Sbjct: 6 STRAFVKNVKRLIVKVGTAVVTRADGR-LALGRLGALCEQLQELNSQGYEVILVTSGAVG 64
Query: 80 FGKQKLAQELLMSLSMRETLSPK 102
G+Q+L L++ S + P+
Sbjct: 65 VGRQRLRYRKLLNSSFLDLQKPQ 87
>sp|O04015|P5CS_ACTDE Delta-1-pyrroline-5-carboxylate synthase OS=Actinidia deliciosa
PE=2 SV=1
Length = 717
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 20 SDRGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVA 79
S R +K +R+++K+G+AV+TR D LALGRL ++ EQ+ E + +G E I+VTSGAV
Sbjct: 6 STRAFVKGVKRVIIKVGTAVVTRADGR-LALGRLGALCEQIHELNSQGFEVILVTSGAVG 64
Query: 80 FGKQKLAQELLMSLSMRETLSPK 102
G+Q+L L++ S + P+
Sbjct: 65 VGRQRLRYRKLVNSSFADLQKPQ 87
>sp|P54888|P5CS2_ARATH Delta-1-pyrroline-5-carboxylate synthase B OS=Arabidopsis thaliana
GN=P5CSB PE=2 SV=1
Length = 726
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R K +R+VVK+G+AV+T + LALGRL +I EQ+AE + +G E I+V+SGAV G
Sbjct: 8 RAFAKDVKRIVVKVGTAVVTGKGGR-LALGRLGAICEQLAELNSDGFEVILVSSGAVGLG 66
Query: 82 KQKLAQELLMSLSMRETLSPK 102
+Q+L L++ S + P+
Sbjct: 67 RQRLRYRQLVNSSFADLQKPQ 87
>sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase OS=Oryza sativa subsp.
japonica GN=P5CS PE=2 SV=2
Length = 716
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ +R+++K+G+AV++R+D LALGR+ ++ EQV E + G E I+VTSGAV G
Sbjct: 8 RSFVRDVKRVIIKVGTAVVSRQDGR-LALGRVGALCEQVKELNSLGYEVILVTSGAVGVG 66
Query: 82 KQKLAQELLMSLSMRETLSPK 102
+Q+L L++ S + P+
Sbjct: 67 RQRLRYRKLVNSSFADLQKPQ 87
>sp|P32296|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase OS=Vigna aconitifolia PE=2
SV=1
Length = 671
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
RG +K +R+++K+G+AV+TRE E LA+GRL ++ EQ+ + + G + I+V+SG V G
Sbjct: 9 RGFMKDVKRVIIKVGTAVVTRE-EGRLAVGRLGALCEQIKQLNSLGYDIILVSSGPVGIG 67
Query: 82 KQKLAQELLMSLSMRETLSPK 102
+Q+L L++ S + P+
Sbjct: 68 RQRLRFRKLINSSFADLQKPQ 88
>sp|P54887|P5CS1_ARATH Delta-1-pyrroline-5-carboxylate synthase A OS=Arabidopsis thaliana
GN=P5CSA PE=1 SV=1
Length = 717
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 29 RRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLAQE 88
+R+VVK+G+AV+T + LALGRL ++ EQ+AE + +G E I+V+SGAV G+Q+L
Sbjct: 15 KRIVVKVGTAVVTGKGGR-LALGRLGALCEQLAELNSDGFEVILVSSGAVGLGRQRLRYR 73
Query: 89 LLMSLSMRETLSPK 102
L++ S + P+
Sbjct: 74 QLVNSSFADLQKPQ 87
>sp|Q67LC1|PROB_SYMTH Glutamate 5-kinase OS=Symbiobacterium thermophilum (strain T /
IAM 14863) GN=proB PE=3 SV=1
Length = 262
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R +L++ +R+++K+G++ +T H L LGR+ ++V Q+A+ H EGR+ I+VTSGAV G
Sbjct: 2 RERLRHCKRVIIKVGTSTLTHPGGH-LHLGRMEALVRQIADLHFEGRQVILVTSGAVGAG 60
Query: 82 KQKLA 86
+L
Sbjct: 61 LGRLG 65
>sp|Q6AFY0|PROB_LEIXX Glutamate 5-kinase OS=Leifsonia xyli subsp. xyli (strain CTCB07)
GN=proB PE=3 SV=1
Length = 270
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 18 SFSDRGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGA 77
+ DRGQ++ ARR+VVK+GS+ I+ E+ G++ +V+ +AE H G + ++V+SGA
Sbjct: 2 TIDDRGQIRSARRIVVKVGSSSISGENA-----GQIGPLVDALAEAHGRGSQVVLVSSGA 56
Query: 78 VAFGKQKLA 86
+A G LA
Sbjct: 57 IATGIPYLA 65
>sp|Q5SH03|PROB_THET8 Glutamate 5-kinase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=proB PE=3 SV=1
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKL 85
A+RLVVK+GSAV+T E GL L +A I QVA EGRE ++V+SGAVA G ++L
Sbjct: 7 AKRLVVKVGSAVLT--GERGLDLEAMAEIARQVAALREEGREVVLVSSGAVAAGMRRL 62
>sp|Q60050|PROB_THET2 Glutamate 5-kinase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=proB PE=3 SV=2
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKL 85
A+RLVVK+GSAV+T E GL L +A I QVA EGRE ++V+SGAVA G ++L
Sbjct: 7 AKRLVVKVGSAVLT--GERGLDLEAMAEIARQVAALREEGREVVLVSSGAVAAGMRRL 62
>sp|A6W351|PROB_MARMS Glutamate 5-kinase OS=Marinomonas sp. (strain MWYL1) GN=proB PE=3
SV=1
Length = 374
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ A+R+VVK+GSA++T D GL + R+ V Q+AE +G+E ++V+SG++A G
Sbjct: 4 REKIAKAQRVVVKIGSALLT-NDGQGLDVARIGLWVAQIAELRAQGKEVVLVSSGSIAAG 62
Query: 82 KQKLA 86
++L
Sbjct: 63 MKRLG 67
>sp|Q30XW1|PROB_DESDG Glutamate 5-kinase OS=Desulfovibrio desulfuricans (strain G20)
GN=proB PE=3 SV=1
Length = 379
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 20 SDRGQ-LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAV 78
++RGQ L ARR+V+K+GSAV+T + GL +G + ++V Q+A+ H G + ++V+SGAV
Sbjct: 5 TERGQVLDSARRVVIKVGSAVLTSGN--GLDVGVVDNLVAQIADLHGRGVDVVLVSSGAV 62
Query: 79 AFGKQKLAQEL-LMSLSMRETLSPKDHSRSNHFDSE 113
+ G+ L + + + ++ S SR H+ E
Sbjct: 63 SAGRAVLRRCCEIKGMPHKQAASAVGQSRLMHYYDE 98
>sp|Q2LR78|PROB_SYNAS Glutamate 5-kinase OS=Syntrophus aciditrophicus (strain SB)
GN=proB PE=3 SV=1
Length = 385
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 25 LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQK 84
LK +R+++K+GSAV+T ++GL L R+ +V+Q+A G + +MVTSGA+A GK +
Sbjct: 9 LKNVKRVLIKIGSAVLT--GDNGLDLERIQHLVDQMAALTHRGYQVVMVTSGAIASGKHR 66
Query: 85 LA 86
L
Sbjct: 67 LG 68
>sp|C6BZ93|PROB_DESAD Glutamate 5-kinase OS=Desulfovibrio salexigens (strain ATCC 14822 /
DSM 2638 / NCIB 8403 / VKM B-1763) GN=proB PE=3 SV=1
Length = 377
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 25 LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQK 84
LK A+R+VVK+GSAV+T + G+ LG + + +Q+A H G + ++V+SGAVA G+
Sbjct: 8 LKEAKRIVVKIGSAVLTTAE--GINLGLICRLADQLATLHERGVDIVLVSSGAVAAGRNS 65
Query: 85 LAQEL-LMSLSMRETLSPKDHSRSNH-FDSENPKTNIYTHIILMFVD 129
+ L L R+ S SR H +D + + T +L+ D
Sbjct: 66 IPSGAKLDDLPARQAASAIGQSRLMHEYDETFRRFGLVTSQVLLTRD 112
>sp|B8GQQ4|PROB_THISH Glutamate 5-kinase OS=Thioalkalivibrio sp. (strain HL-EbGR7)
GN=proB PE=3 SV=1
Length = 375
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R QL ARR ++K+GSA++T E GL LA EQ+A GRE ++V+SGAVA G
Sbjct: 5 RQQLGKARRWIIKIGSALLTNEG-RGLDHEALAGWAEQIARLRASGREVVLVSSGAVAEG 63
Query: 82 KQKLA 86
+L
Sbjct: 64 MSRLG 68
>sp|Q1R0B9|PROB_CHRSD Glutamate 5-kinase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=proB PE=3 SV=1
Length = 378
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 20 SDRGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVA 79
+ R L+ ARR+VVK+GSA++T D GL + V+Q+A H G E ++V+SGAVA
Sbjct: 7 ASRDALRRARRVVVKIGSALLT-NDGRGLDADAIGEWVDQIAALHARGIEVVLVSSGAVA 65
Query: 80 FGKQKL 85
G +L
Sbjct: 66 EGMARL 71
>sp|Q747Q3|PROB_GEOSL Glutamate 5-kinase OS=Geobacter sulfurreducens (strain ATCC 51573
/ DSM 12127 / PCA) GN=proB PE=3 SV=1
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 23 GQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGK 82
G L +R+V+K+GS V+T D +GL + SI QVAE GR+ I+V+SGAVA G+
Sbjct: 4 GILSKVKRIVIKIGSGVLTCGD-NGLNKPLMGSIAAQVAELRASGRQVIIVSSGAVAAGR 62
Query: 83 QKLA 86
++L
Sbjct: 63 KELG 66
>sp|A1KAD1|PROB_AZOSB Glutamate 5-kinase OS=Azoarcus sp. (strain BH72) GN=proB PE=3
SV=1
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++K ARRL+VK+GSA++T + GL L Q+A GRE ++V+SGA+A G
Sbjct: 2 RDKIKNARRLIVKVGSALVT-NNGAGLDPAALDDWARQIAALRARGREIVLVSSGAIAAG 60
Query: 82 KQKLA 86
Q+L
Sbjct: 61 MQRLG 65
>sp|Q2S9T4|PROB_HAHCH Glutamate 5-kinase OS=Hahella chejuensis (strain KCTC 2396)
GN=proB PE=3 SV=1
Length = 386
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R +L+ RR V+K+GSA++T D GLAL + V+Q+A +G E ++V+SGAVA G
Sbjct: 16 RARLRETRRWVIKIGSALLT-NDGRGLALDAMGLWVDQLAALRKDGVEVVIVSSGAVAEG 74
Query: 82 KQKLA 86
+L
Sbjct: 75 MSRLG 79
>sp|Q89X86|PROB_BRAJA Glutamate 5-kinase OS=Bradyrhizobium japonicum (strain USDA 110)
GN=proB PE=3 SV=1
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 24 QLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQ 83
+L RR+VVK+GSA++ D+ + LA++ + +A+ H EGR+ ++V+SG++A G+
Sbjct: 5 ELSQFRRIVVKVGSALLVDSDKGEVRTSWLAALADDMAKLHKEGRDVLVVSSGSIALGRS 64
Query: 84 KL 85
+L
Sbjct: 65 RL 66
>sp|A1WY47|PROB_HALHL Glutamate 5-kinase OS=Halorhodospira halophila (strain DSM 244 /
SL1) GN=proB PE=3 SV=1
Length = 376
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R L+ A+R V+K+GSA+IT +D GLA ++++ +QVA GR+ +V+SGAVA G
Sbjct: 4 REALRQAQRWVIKVGSALIT-DDGRGLAHEQMSAWADQVAALRKAGRQVTLVSSGAVAEG 62
Query: 82 KQKLA 86
Q+L
Sbjct: 63 MQRLG 67
>sp|A1VK89|PROB_POLNA Glutamate 5-kinase OS=Polaromonas naphthalenivorans (strain CJ2)
GN=proB PE=3 SV=1
Length = 378
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 25 LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQK 84
L+ ARR+VVK+GS+++T E GL + EQ+A +GRE IMV+SGA+A G ++
Sbjct: 10 LRNARRIVVKVGSSLVTNEG-RGLDAIAIGQWCEQLAALIKDGREVIMVSSGAIAEGMKR 68
Query: 85 LAQEL 89
L L
Sbjct: 69 LGWSL 73
>sp|Q2VZU1|PROB_MAGSA Glutamate 5-kinase OS=Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264) GN=proB PE=3 SV=1
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 25 LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQK 84
L A+RL+VK+GS+++ + + G L ++ +A C G+E I+V+SGAVA G++K
Sbjct: 4 LAAAKRLIVKIGSSLLVDDSTGQVRRGWLETLAADIAACKARGQEVIVVSSGAVAVGRRK 63
Query: 85 LAQELLMSLSMRE 97
L L+ L + E
Sbjct: 64 LG--LVPPLKLEE 74
>sp|A6VBV2|PROB_PSEA7 Glutamate 5-kinase OS=Pseudomonas aeruginosa (strain PA7) GN=proB
PE=3 SV=1
Length = 372
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ ARR VVK+GSA++T D GL +A VEQ+ H G E ++V+SGAVA G
Sbjct: 2 RDKVTGARRWVVKIGSALLT-ADGRGLDRNAMAVWVEQMVALHCAGIELVLVSSGAVAAG 60
Query: 82 KQKLA 86
+L
Sbjct: 61 MSRLG 65
>sp|Q9HVL9|PROB_PSEAE Glutamate 5-kinase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=proB PE=3 SV=1
Length = 372
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ ARR VVK+GSA++T D GL +A VEQ+ H G E ++V+SGAVA G
Sbjct: 2 RDKVTGARRWVVKIGSALLT-ADGRGLDRNAMAVWVEQMVALHCAGIELVLVSSGAVAAG 60
Query: 82 KQKLA 86
+L
Sbjct: 61 MSRLG 65
>sp|Q02GB2|PROB_PSEAB Glutamate 5-kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14)
GN=proB PE=3 SV=1
Length = 372
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ ARR VVK+GSA++T D GL +A VEQ+ H G E ++V+SGAVA G
Sbjct: 2 RDKVTGARRWVVKIGSALLT-ADGRGLDRNAMAVWVEQMVALHCAGIELVLVSSGAVAAG 60
Query: 82 KQKLA 86
+L
Sbjct: 61 MSRLG 65
>sp|B7V0A8|PROB_PSEA8 Glutamate 5-kinase OS=Pseudomonas aeruginosa (strain LESB58)
GN=proB PE=3 SV=1
Length = 372
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ ARR VVK+GSA++T D GL +A VEQ+ H G E ++V+SGAVA G
Sbjct: 2 RDKVTGARRWVVKIGSALLT-ADGRGLDRNAMAVWVEQMVALHCAGIELVLVSSGAVAAG 60
Query: 82 KQKLA 86
+L
Sbjct: 61 MSRLG 65
>sp|Q1QQT9|PROB_NITHX Glutamate 5-kinase OS=Nitrobacter hamburgensis (strain X14 / DSM
10229) GN=proB PE=3 SV=1
Length = 379
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 25 LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQK 84
LK RR+VVK+GS+++ D + L+++ + +A H EGR+ ++V+SG++A G+ K
Sbjct: 6 LKKFRRIVVKVGSSLLIDSDAGEVRAAWLSALADDIAGLHGEGRDVLIVSSGSIALGRSK 65
Query: 85 L 85
L
Sbjct: 66 L 66
>sp|Q12FA0|PROB_POLSJ Glutamate 5-kinase OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=proB PE=3 SV=1
Length = 378
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 25 LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQK 84
L+ ARR+VVK+GS+++T E GL + EQ+A +GRE IMV+SGA+A G ++
Sbjct: 10 LRNARRIVVKVGSSLVTNEG-RGLDADAIGLWCEQLAALVKDGREVIMVSSGAIAEGMKR 68
Query: 85 LA 86
L
Sbjct: 69 LG 70
>sp|Q820M4|PROB_NITEU Glutamate 5-kinase OS=Nitrosomonas europaea (strain ATCC 19718 /
NBRC 14298) GN=proB PE=3 SV=1
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 25 LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQK 84
L+ ARR+VVK+GS+++T E HGL L Q++ G+E ++V+SGAVA G Q+
Sbjct: 6 LQSARRIVVKVGSSLVTNEG-HGLDRCALGGWAGQISRLRQMGKEVVLVSSGAVAEGMQR 64
Query: 85 LAQEL 89
L ++
Sbjct: 65 LGWKM 69
>sp|Q7MA27|PROB_WOLSU Glutamate 5-kinase OS=Wolinella succinogenes (strain ATCC 29543 /
DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=proB
PE=3 SV=1
Length = 261
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 19/89 (21%)
Query: 29 RRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLA-- 86
RR+V+K+GSA+++R H +A+ R+ S+ +AE +G E I+VTS AVA G LA
Sbjct: 2 RRIVIKVGSALLSRG--HEMAMDRMESLCRFIAELKQKGDEVILVTSAAVAAGYTALALD 59
Query: 87 --------------QELLMSLSMRETLSP 101
Q LLM+L +TL+P
Sbjct: 60 KRQLPNRQALAAIGQPLLMNL-YHQTLAP 87
>sp|Q6F9D9|PROB_ACIAD Glutamate 5-kinase OS=Acinetobacter sp. (strain ADP1) GN=proB PE=3
SV=1
Length = 377
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 24 QLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQ 83
QLK +R+VVK+GS+++T + GL L ++ Q+A+ H G E I+V+SGAVA G
Sbjct: 10 QLKACKRIVVKIGSSLLTANGQ-GLDLDAISHWAMQIADLHNAGHEIILVSSGAVAEGMV 68
Query: 84 KLAQELLMSLSMRETLSP 101
+ M L+ R T P
Sbjct: 69 R------MKLTSRPTDLP 80
>sp|Q39QR3|PROB_GEOMG Glutamate 5-kinase OS=Geobacter metallireducens (strain GS-15 /
ATCC 53774 / DSM 7210) GN=proB PE=3 SV=1
Length = 373
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 25 LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQK 84
LK +R+V+K+GS V+T DE+GL +A + + A +GR+ I+V+SGAVA G+++
Sbjct: 6 LKKVKRIVIKIGSRVLT-GDENGLNHAFIARLAAETASLRQQGRQVIVVSSGAVAAGRRE 64
Query: 85 LAQE 88
L E
Sbjct: 65 LGIE 68
>sp|Q8A1E7|PROB_BACTN Glutamate 5-kinase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=proB
PE=3 SV=1
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 30 RLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKL-AQE 88
R+ VK+GS V+ R D L + R++++V+Q+AE + G E I+++SGAVA G+ ++ Q+
Sbjct: 7 RIAVKVGSNVLARRD-GTLDVTRMSALVDQIAELNKSGVEIILISSGAVASGRSEIHPQK 65
Query: 89 LLMSLSMRETLS 100
L S+ R+ S
Sbjct: 66 KLDSVDQRQLFS 77
>sp|C5BQB5|PROB_TERTT Glutamate 5-kinase OS=Teredinibacter turnerae (strain ATCC 39867
/ T7901) GN=proB PE=3 SV=1
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 19 FSDRGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAV 78
S R + +RR V+K+GSA++T ++ GL +A+ VEQ+A +G E ++V+SGAV
Sbjct: 1 MSKRQLVTQSRRFVIKIGSALLT-DNGRGLDQKAMAAWVEQIAALSKKGYEVVLVSSGAV 59
Query: 79 AFGKQKLAQE 88
A G +L +
Sbjct: 60 AAGMTRLGWK 69
>sp|O65361|P5CS_MESCR Delta-1-pyrroline-5-carboxylate synthase OS=Mesembryanthemum
crystallinum GN=P5CS PE=2 SV=1
Length = 719
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 41 TREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLAQELLMSLSMRETLS 100
TR D LALGRL S+ EQ+ E + +G E I+VTSGAV+ G+Q+L L++ S +
Sbjct: 24 TRSDGR-LALGRLGSLCEQLKELNSDGYEVILVTSGAVSAGRQRLRFRKLVNSSFADLQK 82
Query: 101 PK 102
P+
Sbjct: 83 PQ 84
>sp|Q7NQC8|PROB_CHRVO Glutamate 5-kinase OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131
/ NCTC 9757) GN=proB PE=3 SV=1
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 30 RLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKL 85
R+VVK+GS+++T D GL L LA E+VAE G++ ++V+SGA+A G Q+L
Sbjct: 10 RIVVKVGSSLVT-NDGRGLDLNALARWAEEVAELKRRGKQVVLVSSGAIAEGCQRL 64
>sp|B2SYV1|PROB_BURPP Glutamate 5-kinase OS=Burkholderia phytofirmans (strain DSM 17436
/ PsJN) GN=proB PE=3 SV=1
Length = 372
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 7/67 (10%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGL---ALGRLASIVEQVAECHLEGRECIMVTSGAV 78
R + +RRLVVK+GS+++T D GL A+GR A+ Q+A +G+E ++V+SGA+
Sbjct: 2 RSVIADSRRLVVKVGSSLVT-NDGRGLDHAAIGRWAA---QIAALRAQGKEVVLVSSGAI 57
Query: 79 AFGKQKL 85
A G Q+L
Sbjct: 58 AEGMQRL 64
>sp|B1JF56|PROB_PSEPW Glutamate 5-kinase OS=Pseudomonas putida (strain W619) GN=proB
PE=3 SV=1
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ A+R VVK+GSA++T D GL G +A VEQ+ G E ++V+SGAVA G
Sbjct: 2 RSKVTGAKRWVVKIGSALLT-ADGKGLDRGAMAVWVEQMVALREAGVELVLVSSGAVAAG 60
Query: 82 KQKLA 86
+L
Sbjct: 61 MSQLG 65
>sp|B0KMF7|PROB_PSEPG Glutamate 5-kinase OS=Pseudomonas putida (strain GB-1) GN=proB
PE=3 SV=1
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ A+R VVK+GSA++T D GL G +A VEQ+ G E ++V+SGAVA G
Sbjct: 2 RSKVTGAKRWVVKIGSALLT-ADGKGLDRGAMAVWVEQMVALREAGVELVLVSSGAVAAG 60
Query: 82 KQKLA 86
+L
Sbjct: 61 MSQLG 65
>sp|Q6G0S7|PROB_BARQU Glutamate 5-kinase OS=Bartonella quintana (strain Toulouse)
GN=proB PE=3 SV=1
Length = 384
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 24 QLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQ 83
+L + +R+VVK+GSA++ E + GL L S++ VA+ H +G E ++V+SGA+A G+
Sbjct: 12 KLAHYKRIVVKIGSALLV-EPQTGLRAEWLKSLINDVAKLHQKGVEILLVSSGAIALGRT 70
Query: 84 KL 85
L
Sbjct: 71 LL 72
>sp|Q88Q07|PROB_PSEPK Glutamate 5-kinase OS=Pseudomonas putida (strain KT2440) GN=proB
PE=3 SV=1
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ A+R VVK+GSA++T D GL G +A VEQ+ G E ++V+SGAVA G
Sbjct: 2 RSKVTGAKRWVVKIGSALLT-ADGKGLDRGAMAVWVEQMVALREAGVELVLVSSGAVAAG 60
Query: 82 KQKLA 86
+L
Sbjct: 61 MSQLG 65
>sp|A5VYC7|PROB_PSEP1 Glutamate 5-kinase OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=proB PE=3 SV=1
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81
R ++ A+R VVK+GSA++T D GL G +A VEQ+ G E ++V+SGAVA G
Sbjct: 2 RSKVTGAKRWVVKIGSALLT-ADGKGLDRGAMAVWVEQMVALREAGVELVLVSSGAVAAG 60
Query: 82 KQKLA 86
+L
Sbjct: 61 MSQLG 65
>sp|Q13U16|PROB_BURXL Glutamate 5-kinase OS=Burkholderia xenovorans (strain LB400)
GN=proB PE=3 SV=1
Length = 372
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGL---ALGRLASIVEQVAECHLEGRECIMVTSGAV 78
R + +RRLVVK+GS+++T D GL A+GR A Q+A +G+E ++V+SGA+
Sbjct: 2 RSVIADSRRLVVKVGSSLVT-NDGRGLDHAAIGRWAG---QIAALRAQGKEVVLVSSGAI 57
Query: 79 AFGKQKLA 86
A G Q+L
Sbjct: 58 AEGMQRLG 65
>sp|B2JHD6|PROB_BURP8 Glutamate 5-kinase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=proB PE=3 SV=1
Length = 372
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Query: 22 RGQLKYARRLVVKLGSAVITREDEHGL---ALGRLASIVEQVAECHLEGRECIMVTSGAV 78
R + +RRLVVK+GS+++T D GL A+GR A+ Q+A +G+E ++V+SGA+
Sbjct: 2 RSVIADSRRLVVKVGSSLVT-NDGRGLDHTAIGRWAA---QIAALREQGKEVVLVSSGAI 57
Query: 79 AFGKQKLA 86
A G Q+L
Sbjct: 58 AEGMQRLG 65
>sp|Q9ZG98|PROB_MEIRU Glutamate 5-kinase OS=Meiothermus ruber GN=proB PE=3 SV=2
Length = 377
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 8/60 (13%)
Query: 29 RRLVVKLGSAVITRED--EHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLA 86
RRLVVK+GSAV++ +H LA I QVA EGRE ++V+SGA A G QKL
Sbjct: 13 RRLVVKVGSAVLSGPQGRQHQLA------IAAQVAALRAEGREVVLVSSGAQATGMQKLG 66
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,109,345
Number of Sequences: 539616
Number of extensions: 1316661
Number of successful extensions: 4486
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 3906
Number of HSP's gapped (non-prelim): 480
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)